BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038522
(590 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1724
Score = 773 bits (1997), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/578 (65%), Positives = 460/578 (79%), Gaps = 1/578 (0%)
Query: 11 GQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTK 70
G+L +ALK S P T LDPS Y+ +LQ CIDKKA++Q HLIH H+ITNG+ S+LHL+TK
Sbjct: 12 GRLAEALKLLSSNP-TRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTK 70
Query: 71 VIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
+IIFY KVGDV++AR FD MPER+VVSWTAM+SGY+QNG E A ++FS M GV+AN
Sbjct: 71 LIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKAN 130
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE 190
QFTY SALRAC +R L G +QG IQKGRFVENLFVKSAL+D ++KCG +EDA LF
Sbjct: 131 QFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFG 190
Query: 191 RIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMK 250
+ +DVVSWNAMIGG A+QGF DDSF +FRSM+R G+ PDC+TLGS+LRAS G L+
Sbjct: 191 TMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLII 250
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR 310
+QIH +I +LG S + +TG LI+ YAK GS+RSA L + MLK D+ S TALI+G+A
Sbjct: 251 ANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAH 310
Query: 311 DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA 370
+ +S +A DLFK+M +G+DDVILC MLNICAN+AS LG QIHAFA KYQ SYD A
Sbjct: 311 EGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVA 370
Query: 371 VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG 430
+GNALIDMYAKSGEI DA RAFDEM +KNVISWTSLI+GYAKHGYGH A+ LYKKM+ +G
Sbjct: 371 MGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKG 430
Query: 431 MVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA 490
PNDVTFLSLLFACSHTGLT EG E F +M+NKY I PRAEH+SC+VDLFAR+G LE A
Sbjct: 431 FKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEA 490
Query: 491 YNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAA 550
YN++ +++IK ASLW AILGA SIYG SLG+ AA NLF+M+PE SVNYVVL++IY+AA
Sbjct: 491 YNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAA 550
Query: 551 GAWDNARKTRKLMEERSLRKNPGYSFLQSSKKNILLLE 588
G WD+A K RKLMEERS +KN GYSF Q++KK+I LL+
Sbjct: 551 GLWDDAWKIRKLMEERSTKKNAGYSFFQATKKSIPLLQ 588
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 160/532 (30%), Positives = 278/532 (52%), Gaps = 2/532 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IH ++ G +SN+ + ++ Y++ G A F M ER+++SW +M++ Y Q+G
Sbjct: 1070 IHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGK 1129
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ L + + +L+ G N T++SAL AC+ L +++ I F + L V +A
Sbjct: 1130 CLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNA 1189
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+ +Y K G + +A + + + + D V+WNA+IGG A +++ ++ + +G+ +
Sbjct: 1190 LVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPAN 1249
Query: 232 CFTLGSILRASVGGIELMKIS-QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
T+ S+L A +L+K IH I+ G ES + + SLI +YAK G + S+ ++
Sbjct: 1250 YITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIF 1309
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
+ I+ A+++ A +EA +F +M + +D L AN+A L
Sbjct: 1310 DGLGNKSPITWNAMVAANAHH-GCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVL 1368
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
G+Q+H K D V NA +DMY K GE+ D + + +++ +SW LI+ +
Sbjct: 1369 EEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAF 1428
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
A+HG +A E + +M G P+ VTF+SLL AC+H GL EG + M ++ + P
Sbjct: 1429 ARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPG 1488
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
EH C++DL R G+L A I++M + P W ++L AC I+GN L A +L
Sbjct: 1489 IEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLL 1548
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+++P YV+ SN+ +G W++ RK M +++K P S+++ K
Sbjct: 1549 ELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDK 1600
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 209/395 (52%), Gaps = 1/395 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H ++ G ++++ T ++ FY +G V +A+K F+ MP+ NVVSWT+++ GY+ +G
Sbjct: 868 VHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGN 927
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
L V+ M + GV NQ T+++ +C + G + G I + F +++ V ++
Sbjct: 928 PGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANS 987
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+ +++ +E+A +F+ + D++SWNAMI A G +S F M + +
Sbjct: 988 LISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETN 1047
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
TL S+L L IH L++KLGL+S+ + +L+ +Y++ G A +++
Sbjct: 1048 STTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQ 1107
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
+M + D+IS ++++ + +D + + +++ ++ V L C+N L
Sbjct: 1108 AMTERDLISWNSMMACYVQDGK-CLDGLKILAELLQMGKVMNHVTFASALAACSNPECLI 1166
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
+ +HA VGNAL+ MY K G + +A + M + ++W +LI G+A
Sbjct: 1167 ESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHA 1226
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
++ +EA++ YK ++ +G+ N +T +S+L ACS
Sbjct: 1227 ENEEPNEAVKAYKLIREKGIPANYITMVSVLGACS 1261
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 136/513 (26%), Positives = 249/513 (48%), Gaps = 16/513 (3%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HA I + + +I Y+K G++ AR FD M RN SW+ M+SGY + G
Sbjct: 766 LHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGL 825
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG-GRMIQGSIQKGRFVENLFVKS 170
E A+ +F M GV N F +S + AC+R ++ G + G + K + +++V +
Sbjct: 826 YEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGT 885
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
AL+ Y G + +A LFE + +VVSW +++ G + G + +++ M ++G+
Sbjct: 886 ALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSG 945
Query: 231 DCFTLGSILRASVGGIELMKIS-QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
+ T ++ +S G +E + Q+ II+ G E S + SLI +++ + S+ A +
Sbjct: 946 NQNTFATV-TSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYV 1004
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ M + DIIS A+IS +A +E+ F M + L +L++C++V +
Sbjct: 1005 FDHMNECDIISWNAMISAYAH-HGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDN 1063
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
L GR IH K + + N L+ +Y+++G DA F M ++++ISW S++A
Sbjct: 1064 LKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMAC 1123
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
Y + G + +++ ++ G V N VTF S L ACS+ E + +++ I+
Sbjct: 1124 YVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIE-----SKIVHALIIVA 1178
Query: 470 RAEHF----SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
F + +V ++ + G + A +++ M +P W+A++G + N E
Sbjct: 1179 GFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALIGGHA--ENEEPNEAV 1235
Query: 526 ARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARK 558
E NY+ + ++ A A D+ K
Sbjct: 1236 KAYKLIREKGIPANYITMVSVLGACSAPDDLLK 1268
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 130/490 (26%), Positives = 241/490 (49%), Gaps = 4/490 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
+ +T+ ++ C + + + + HII G+E ++ ++ +I ++ V A F
Sbjct: 946 NQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVF 1005
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D M E +++SW AMIS YA +G +L F M N T SS L C+ + L+
Sbjct: 1006 DHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLK 1065
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
GR I G + K N+ + + LL LY++ G EDA ++F+ + +D++SWN+M+
Sbjct: 1066 WGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYV 1125
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G D + +++ G + T S L A L++ +H LII G
Sbjct: 1126 QDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLI 1185
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +L+ +Y K G + A ++ ++M + D ++ ALI G A ++ EA +K + K
Sbjct: 1186 VGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEE-PNEAVKAYKLIREK 1244
Query: 329 KMGIDDVILCLMLNICANVAS-LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ + + + +L C+ L G IHA D V N+LI MYAK G++
Sbjct: 1245 GIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNS 1304
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
+N FD +G+K+ I+W +++A A HG G EA++++ +M++ G+ + +F L A ++
Sbjct: 1305 SNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATAN 1364
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
+ EG +L ++ K + +D++ + G++ M+ Q I + W+
Sbjct: 1365 LAVLEEGQQLH-GLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQ-PINRSRLSWN 1422
Query: 508 AILGACSIYG 517
++ A + +G
Sbjct: 1423 ILISAFARHG 1432
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 88/175 (50%), Gaps = 3/175 (1%)
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWT 404
+ + S G+ +HAF + N LI+MY+K G I A FDEM +N SW+
Sbjct: 755 SEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWS 814
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG-LTCEGWELFTDMIN 463
++++GY + G EA+ L+ +M G+ PN SL+ ACS +G + EG+++ ++
Sbjct: 815 TMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVV- 873
Query: 464 KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
K IL + +V + G + +A + +M S W++++ S GN
Sbjct: 874 KTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVS-WTSLMVGYSDSGN 927
>gi|255544622|ref|XP_002513372.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547280|gb|EEF48775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 597
Score = 770 bits (1987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/578 (64%), Positives = 452/578 (78%), Gaps = 1/578 (0%)
Query: 13 LKQALKFSLSCPD-TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKV 71
LKQ S P+ T L S YM +LQ CI+ + +Q LIH+HII NG++SNLHLSTK+
Sbjct: 19 LKQRFHHSPCEPELTHLSSSLYMKILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKL 78
Query: 72 IIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQ 131
IIFY K G+ ++ARK FDRMPERNVVSWTA ISGYA+NG+ ++ALLVFS M R+GVRANQ
Sbjct: 79 IIFYVKFGETINARKVFDRMPERNVVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQ 138
Query: 132 FTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER 191
FTY S LRAC +R L+ G I G IQK RF+ NLFV+SAL+DL++KCG +EDA LFE
Sbjct: 139 FTYGSVLRACTGLRCLERGMQIHGCIQKNRFIGNLFVQSALVDLHSKCGNMEDARYLFET 198
Query: 192 IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI 251
+ +DVVSWNA+IGG A Q FNDDSF +F SMM +G+ PDCFTLGS+L+AS L+K+
Sbjct: 199 MSERDVVSWNAVIGGYAAQDFNDDSFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKV 258
Query: 252 SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD 311
QIH +II+LG S L GSLID YAK ++SA LY+SMLK D+IS TA+++G+AR
Sbjct: 259 CQIHGIIIQLGFGSHIDLNGSLIDAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARK 318
Query: 312 DNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAV 371
++S+EA DLFKDM M IDDV C MLN+CA++ASL++GRQIHA A KY+ SYD A
Sbjct: 319 CSYSREALDLFKDMQHIFMEIDDVTFCTMLNVCADIASLSIGRQIHALAIKYKPSYDVAT 378
Query: 372 GNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGM 431
GNAL+DMYAKSGEI DA RAF EM +KNVISWTSLI GY KHGYGHEAI LYKKM++EG+
Sbjct: 379 GNALVDMYAKSGEIEDATRAFYEMKEKNVISWTSLITGYGKHGYGHEAIALYKKMEYEGL 438
Query: 432 VPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAY 491
PND+TFLSLLFACSH+GLT EGWE F +MI KY ILPRAEH+SC++DLFAR GQLE AY
Sbjct: 439 KPNDITFLSLLFACSHSGLTGEGWECFNNMITKYNILPRAEHYSCMIDLFARGGQLEEAY 498
Query: 492 NMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAG 551
NMI +MNIKP +SLW AILGACSIYG+ SLGE+AA +L M+PE S NYVVL+ IY A+G
Sbjct: 499 NMICKMNIKPNSSLWGAILGACSIYGHMSLGEVAATHLLRMDPENSANYVVLAGIYAASG 558
Query: 552 AWDNARKTRKLMEERSLRKNPGYSFLQSSKKNILLLEP 589
+WD A + R LME RSL+K PGYS +QS+ KN+ L+P
Sbjct: 559 SWDKACRMRNLMEYRSLKKIPGYSIIQSTNKNMRRLQP 596
>gi|147801011|emb|CAN60119.1| hypothetical protein VITISV_016375 [Vitis vinifera]
Length = 711
Score = 751 bits (1940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/561 (65%), Positives = 446/561 (79%), Gaps = 2/561 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L+ Y +L CIDKKA++Q HLIH H+ITNG+ S+LHL+TK+IIFY KVGDV++AR
Sbjct: 151 LESKYYEGIL--CIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNV 208
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD MPER+VVSWTAM+SGY+QNG E A ++FS M GV+ANQFTY SALRAC +R L
Sbjct: 209 FDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCL 268
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G +QG IQKGRFVENLFVKSAL+D ++KCG +EDA LF + +DVVSWNAMIGG
Sbjct: 269 DMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGY 328
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A+QGF DDSF +FRSM+R G+ PDC+TLGS+LRAS G L+ +QIH +I +LG S +
Sbjct: 329 AVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYD 388
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+TG LI+ YAK GS+RSA L + MLK D+ S TALI+G+A + +S +A DLFK+M
Sbjct: 389 IVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQ 448
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+G+DDVILC MLNICAN+AS LG QIHAFA KYQ SYD A+GNALIDMYAKSGEI D
Sbjct: 449 MNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIED 508
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A RAFDEM +KNVISWTSLI+GYAKHGYGH A+ LYKKM+ +G PNDVTFLSLLFACSH
Sbjct: 509 AKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSH 568
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
TGLT EG E F +M+NKY I PRAEH+SC+VDLFAR+G LE AYN++ +++IK ASLW
Sbjct: 569 TGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWG 628
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
AILGA SIYG SLG+ AA NLF+M+PE SVNYVVL++IY+AAG WD+A K RKLMEERS
Sbjct: 629 AILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEERS 688
Query: 568 LRKNPGYSFLQSSKKNILLLE 588
+KN GYSF Q++KK+I LL+
Sbjct: 689 TKKNAGYSFFQATKKSIPLLQ 709
>gi|224096616|ref|XP_002310672.1| predicted protein [Populus trichocarpa]
gi|222853575|gb|EEE91122.1| predicted protein [Populus trichocarpa]
Length = 551
Score = 749 bits (1933), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/546 (65%), Positives = 437/546 (80%)
Query: 34 MSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPE 93
M LQ CI+ KA++ HLIH I+TNG+ SN+HLSTK+IIFY+K+GD +SARK FDRMPE
Sbjct: 1 MKSLQLCIETKAKKPGHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPE 60
Query: 94 RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMI 153
R VVSW+A ISGY+QNG ++ALLVF MLR+G +ANQFTY S LRAC +R LQ G I
Sbjct: 61 RTVVSWSAQISGYSQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQI 120
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN 213
QG ++K RF NL V+SALLDL++KCG +EDA LF +E +DVVSWNA+IG A+QGF+
Sbjct: 121 QGCLEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFS 180
Query: 214 DDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSL 273
DSF +FRSMM++GM PD FT GS+L+AS +++++ QIH LII+LG S L+GSL
Sbjct: 181 GDSFRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSGSL 240
Query: 274 IDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGID 333
ID YAK S+ SA+ LY+SM D+ISCTAL++G+ARD N+S +A DLFK++ M ID
Sbjct: 241 IDAYAKCESLASAHCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKID 300
Query: 334 DVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFD 393
DVILC M NICAN++SL++GRQIHA A K + +YD A+GNALIDMYAKSGEI DANRAF+
Sbjct: 301 DVILCSMFNICANISSLSVGRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFN 360
Query: 394 EMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCE 453
EM +KNVISWTSLI GY HG+GHEAI L+KKM++EG+ PND+TFLSLLFAC+H GLT E
Sbjct: 361 EMEEKNVISWTSLITGYGSHGHGHEAIALFKKMEYEGLKPNDITFLSLLFACNHCGLTGE 420
Query: 454 GWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGAC 513
GWE F +MI+KY ILPRAEHFSC+VDLFAR G LE AYN+I +MNIKP ASLW AILGAC
Sbjct: 421 GWECFNNMISKYNILPRAEHFSCMVDLFARGGLLEEAYNLINKMNIKPNASLWGAILGAC 480
Query: 514 SIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPG 573
IYGN L E AA +LF M+PE SVNYVVL++IY AAG+WDNA K RKLMEER+L+K PG
Sbjct: 481 YIYGNMPLAEEAAIHLFKMDPENSVNYVVLADIYAAAGSWDNAWKMRKLMEERNLKKAPG 540
Query: 574 YSFLQS 579
YSF+ S
Sbjct: 541 YSFIPS 546
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 206/435 (47%), Gaps = 34/435 (7%)
Query: 1 MNIVRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
++++RA FK Q TY S+L+ C + ++ I + +
Sbjct: 87 LDMLRAGFKANQF------------------TYGSVLRACTGLRCLQRGMQIQGCLEKSR 128
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+ SNL + + ++ ++K G + A F M ER+VVSW A+I YA G+ ++ +F
Sbjct: 129 FASNLIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGDSFRMFR 188
Query: 121 AMLRSGVRANQFTYSSALRACAR----MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLY 176
+M++ G+ + FT+ S L+A +R Q ++I IQ G + ++ + +L+D Y
Sbjct: 189 SMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIHQLI---IQLG-YGSHISLSGSLIDAY 244
Query: 177 AKCGWIEDAWILFERIERKDVVSWNAMIGGLAM-QGFNDDSFWLFRSMMRQGMKPDCFTL 235
AKC + A L++ + KD++S A++ G A ++ + LF+ + + MK D L
Sbjct: 245 AKCESLASAHCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKIDDVIL 304
Query: 236 GSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLK 295
S+ L QIH L +K + +LID+YAK G I+ A + + M +
Sbjct: 305 CSMFNICANISSLSVGRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFNEMEE 364
Query: 296 TDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQ 355
++IS T+LI+G+ H EA LFK M + + +D+ +L C + G +
Sbjct: 365 KNVISWTSLITGYG-SHGHGHEAIALFKKMEYEGLKPNDITFLSLLFACNHCGLTGEGWE 423
Query: 356 -IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK-NVISWTSLIAG---Y 410
+ KY A + ++D++A+ G + +A ++M K N W +++ Y
Sbjct: 424 CFNNMISKYNILPRAEHFSCMVDLFARGGLLEEAYNLINKMNIKPNASLWGAILGACYIY 483
Query: 411 AKHGYGHE-AIELYK 424
E AI L+K
Sbjct: 484 GNMPLAEEAAIHLFK 498
>gi|297830768|ref|XP_002883266.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329106|gb|EFH59525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 564
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 285/555 (51%), Positives = 384/555 (69%), Gaps = 4/555 (0%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
LL Y+ L+ C + ++Q LIH + +TNG+ SNL L+ +I Y K GDV ARK
Sbjct: 9 LLSHPLYLKALKLCSYQNVKKQLLLIHGNSVTNGFGSNLQLNDMLIDLYLKQGDVKHARK 68
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FDR+P+R+VVSWTAMIS +++ GY +ALL+F M R VRANQFTY S L++C +
Sbjct: 69 LFDRIPKRDVVSWTAMISRFSRCGYHRDALLLFKQMHRQDVRANQFTYGSVLKSCKDLGC 128
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
L+ G IQG ++KG+ NL V+SALL LYA+CG +EDA + F+ ++ +D+VSWN+MI G
Sbjct: 129 LKEGMQIQGCLEKGKCAGNLIVRSALLSLYARCGKMEDARLQFDSMKERDLVSWNSMIDG 188
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
D SF LF+ M +G KPDCFT GS+LRAS+ L + Q+H L IKLG S
Sbjct: 189 YTTNACVDTSFSLFQLMFAEGKKPDCFTFGSLLRASIVVKCLEPVGQLHGLAIKLGFGRS 248
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ L SL+D Y K GSI +A++L+ K D+ISCTALI+GFA+ + + +AFD+F +MI
Sbjct: 249 SALIRSLVDAYVKCGSIANAWKLHEDTTKRDLISCTALITGFAQQNICTSDAFDIFNEMI 308
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK-YQSSYDAAVGNALIDMYAKSGEI 385
L K +D+V++ ML IC +AS+ +GRQIH FA K Q +D A+GN+LIDMYAKSG+I
Sbjct: 309 LMKTKMDEVVVSSMLKICTTIASVTVGRQIHGFALKSSQIRFDIALGNSLIDMYAKSGDI 368
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
DA AF+EM +K+V SWTSLIAGY +HG +AI+LY +M+HEG+ PNDVTFLSLL AC
Sbjct: 369 EDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHEGIKPNDVTFLSLLSAC 428
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMN--IKPTA 503
SHTG T GW++F MINK+ I R EHFSC++D+ AR G LE AY +IR + I ++
Sbjct: 429 SHTGQTELGWKIFNKMINKHGIKAREEHFSCIIDMLARSGYLEEAYELIRSKDGIISLSS 488
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
S W A L AC +GN L ++AA L +EP+K VNY+ L++++ A GAWD+A KTR+LM
Sbjct: 489 STWGAFLDACRRHGNVQLSKVAASQLLSVEPKKPVNYINLASVHAANGAWDSALKTRQLM 548
Query: 564 EER-SLRKNPGYSFL 577
+E S K PGYS +
Sbjct: 549 KESGSCNKTPGYSLV 563
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 191/400 (47%), Gaps = 15/400 (3%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
D + TY S+L+ C D ++ I + NL + + ++ YA+ G + A
Sbjct: 108 DVRANQFTYGSVLKSCKDLGCLKEGMQIQGCLEKGKCAGNLIVRSALLSLYARCGKMEDA 167
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
R FD M ER++VSW +MI GY N + + +F M G + + FT+ S LRA +
Sbjct: 168 RLQFDSMKERDLVSWNSMIDGYTTNACVDTSFSLFQLMFAEGKKPDCFTFGSLLRASIVV 227
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
+ L+ + G K F + + +L+D Y KCG I +AW L E ++D++S A+I
Sbjct: 228 KCLEPVGQLHGLAIKLGFGRSSALIRSLVDAYVKCGSIANAWKLHEDTTKRDLISCTALI 287
Query: 205 GGLAMQGF-NDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG- 262
G A Q D+F +F M+ K D + S+L+ + QIH +K
Sbjct: 288 TGFAQQNICTSDAFDIFNEMILMKTKMDEVVVSSMLKICTTIASVTVGRQIHGFALKSSQ 347
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
+ L SLID+YAK G I A + M + D+ S T+LI+G+ R N K A DL+
Sbjct: 348 IRFDIALGNSLIDMYAKSGDIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEK-AIDLY 406
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLG-----RQIHAFAFKYQSSYDAAVGNALID 377
M + + +DV +L+ C++ LG + I+ K + + + + ID
Sbjct: 407 NRMEHEGIKPNDVTFLSLLSACSHTGQTELGWKIFNKMINKHGIKAREEHFSCI----ID 462
Query: 378 MYAKSGEIADAN---RAFDEMGDKNVISWTSLIAGYAKHG 414
M A+SG + +A R+ D + + +W + + +HG
Sbjct: 463 MLARSGYLEEAYELIRSKDGIISLSSSTWGAFLDACRRHG 502
>gi|75274055|sp|Q9LT48.1|PP244_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g20730
gi|9294399|dbj|BAB02480.1| unnamed protein product [Arabidopsis thaliana]
gi|51971823|dbj|BAD44576.1| unknown protein [Arabidopsis thaliana]
Length = 565
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 284/555 (51%), Positives = 381/555 (68%), Gaps = 4/555 (0%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
LL PS Y+ L+ C + ++Q LIH + ITNG+ SNL L +I Y K GDV ARK
Sbjct: 10 LLSPSLYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARK 69
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FDR+ +R+VVSWTAMIS +++ GY +ALL+F M R V+ANQFTY S L++C +
Sbjct: 70 LFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGC 129
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
L+ G I GS++KG NL V+SALL LYA+CG +E+A + F+ ++ +D+VSWNAMI G
Sbjct: 130 LKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDG 189
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
D SF LF+ M+ +G KPDCFT GS+LRAS+ L +S++H L IKLG S
Sbjct: 190 YTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRS 249
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ L SL++ Y K GS+ +A++L+ K D++SCTALI+GF++ +N + +AFD+FKDMI
Sbjct: 250 SALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMI 309
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK-YQSSYDAAVGNALIDMYAKSGEI 385
K +D+V++ ML IC +AS+ +GRQIH FA K Q +D A+GN+LIDMYAKSGEI
Sbjct: 310 RMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEI 369
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
DA AF+EM +K+V SWTSLIAGY +HG +AI+LY +M+HE + PNDVTFLSLL AC
Sbjct: 370 EDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSAC 429
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMN--IKPTA 503
SHTG T GW+++ MINK+ I R EH SC++D+ AR G LE AY +IR + ++
Sbjct: 430 SHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSS 489
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
S W A L AC +GN L ++AA L MEP K VNY+ L+++Y A GAWDNA TRKLM
Sbjct: 490 STWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLM 549
Query: 564 EER-SLRKNPGYSFL 577
+E S K PGYS +
Sbjct: 550 KESGSCNKAPGYSLV 564
>gi|15232344|ref|NP_188709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|38564272|gb|AAR23715.1| At3g20730 [Arabidopsis thaliana]
gi|332642896|gb|AEE76417.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 564
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 284/555 (51%), Positives = 381/555 (68%), Gaps = 4/555 (0%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
LL PS Y+ L+ C + ++Q LIH + ITNG+ SNL L +I Y K GDV ARK
Sbjct: 9 LLSPSLYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARK 68
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FDR+ +R+VVSWTAMIS +++ GY +ALL+F M R V+ANQFTY S L++C +
Sbjct: 69 LFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGC 128
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
L+ G I GS++KG NL V+SALL LYA+CG +E+A + F+ ++ +D+VSWNAMI G
Sbjct: 129 LKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDG 188
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
D SF LF+ M+ +G KPDCFT GS+LRAS+ L +S++H L IKLG S
Sbjct: 189 YTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRS 248
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ L SL++ Y K GS+ +A++L+ K D++SCTALI+GF++ +N + +AFD+FKDMI
Sbjct: 249 SALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMI 308
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK-YQSSYDAAVGNALIDMYAKSGEI 385
K +D+V++ ML IC +AS+ +GRQIH FA K Q +D A+GN+LIDMYAKSGEI
Sbjct: 309 RMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEI 368
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
DA AF+EM +K+V SWTSLIAGY +HG +AI+LY +M+HE + PNDVTFLSLL AC
Sbjct: 369 EDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSAC 428
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMN--IKPTA 503
SHTG T GW+++ MINK+ I R EH SC++D+ AR G LE AY +IR + ++
Sbjct: 429 SHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSS 488
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
S W A L AC +GN L ++AA L MEP K VNY+ L+++Y A GAWDNA TRKLM
Sbjct: 489 STWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLM 548
Query: 564 EER-SLRKNPGYSFL 577
+E S K PGYS +
Sbjct: 549 KESGSCNKAPGYSLV 563
>gi|357162206|ref|XP_003579338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g20730-like [Brachypodium distachyon]
Length = 558
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 272/552 (49%), Positives = 373/552 (67%), Gaps = 2/552 (0%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
T DP+ Y SLLQ C+ R+ +H II + +LH+STK++IFYAK GDV +AR
Sbjct: 9 TSADPAFYYSLLQSCM--SCFRRGRSVHHQIIASAAPPDLHMSTKLVIFYAKHGDVAAAR 66
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
K FD MP R+VVSWTAM+SGY++NG AL +F+ ML SGVR NQFTY S ACA
Sbjct: 67 KVFDGMPHRSVVSWTAMVSGYSRNGQTREALDLFTLMLASGVRPNQFTYGSVASACAGAG 126
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
++ G + + KGRFV ++FV+SAL+D++ +CG + DA LF +ERKDVV+WNA++
Sbjct: 127 CVRSGEQVHACVAKGRFVGDVFVQSALMDMHLRCGSVVDAMQLFAEMERKDVVAWNALLR 186
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
GL + D+ L SM+R M PD FT GS L+A L + IH IIKLG
Sbjct: 187 GLVERAQYGDALGLLPSMLRGAMLPDHFTFGSALKACGAVSVLANVELIHTCIIKLGYWG 246
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ GS+ID YAK + SA +Y S+ + D++S TALISG++ D NHS++A +LF +
Sbjct: 247 EKVVIGSIIDAYAKCRGLSSARLIYDSICEPDLVSSTALISGYSMDRNHSEDAMELFCKI 306
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
K + ID V+L +L +CANVASL G QIHA+ K Q D A+ NA++DMYAK+GE
Sbjct: 307 HRKGLRIDGVLLSSLLGLCANVASLRFGTQIHAYMCKRQPMTDVALDNAVVDMYAKAGEF 366
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
ADA RAFDEM +NV+SWTSLI K+G+G +A+ L+ +M +G+ PNDVTFLSLL AC
Sbjct: 367 ADARRAFDEMPYRNVVSWTSLITACGKNGFGEDAVSLFDRMVEDGVKPNDVTFLSLLSAC 426
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
H+GLT +G E FT M++KY I PRAEH+S +DL AR GQL+ A+ +++ ++I+P +S+
Sbjct: 427 GHSGLTSKGMEYFTSMMSKYGIDPRAEHYSSAIDLLARGGQLKDAWKLVQNIDIEPNSSM 486
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
+ A+LGAC +G+ LGE AA+NLF + PE SV+Y VL+N+Y + W++A++TRKLM E
Sbjct: 487 FGAMLGACKTHGSMPLGETAAKNLFTIAPESSVHYAVLANMYAESSLWEDAQRTRKLMAE 546
Query: 566 RSLRKNPGYSFL 577
S K G S +
Sbjct: 547 TSGGKVAGCSVI 558
>gi|413944103|gb|AFW76752.1| hypothetical protein ZEAMMB73_846363 [Zea mays]
Length = 562
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 267/547 (48%), Positives = 368/547 (67%), Gaps = 2/547 (0%)
Query: 33 YMSLLQFCIDKKAERQAHLIH--AHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
Y SLLQ + A RQ +H A I ++ +LHL+TK++IFY+ GDV +AR+ FD
Sbjct: 14 YSSLLQSSMGANAFRQGKSVHHRAIITSSASPPDLHLNTKLVIFYSHFGDVAAARRVFDG 73
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
MP R+VVSWTAM+SGYA+N + AL +F+ MLRSG R NQFT+ SA+RAC R + G
Sbjct: 74 MPHRSVVSWTAMVSGYAKNSRPQEALDLFAFMLRSGARPNQFTFGSAVRACTGARCARSG 133
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
I KGRF ++FV+SAL+D++ +CG + DA LF +ERKD+VSWN+++ G +
Sbjct: 134 EQIHACAAKGRFAGDMFVQSALMDMHLRCGSVGDARRLFAEMERKDLVSWNSLMRGFVER 193
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
+D+ LF SM+R GM PD FT GS L+A L + IH IIKLG N
Sbjct: 194 EHCNDALGLFDSMLRDGMLPDHFTFGSALKACGAISVLFNVELIHACIIKLGYWDENVAI 253
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
SLID YAK S+ SA +Y SM + D++S TALISG++ D N+S +A LF + K +
Sbjct: 254 ASLIDSYAKCRSLSSARVIYDSMCEPDLVSSTALISGYSMDRNYSDDAMKLFCKIHRKGL 313
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
ID ++L +L +CANVAS+ G QIHA+ K Q D A+ NAL+DMYAKSGE D+ R
Sbjct: 314 RIDAILLSSLLGVCANVASIKFGTQIHAYMHKKQPMGDLALDNALVDMYAKSGEFLDSRR 373
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
AFDEM ++NVISWTSLI A+HG+G +A+ L+ +M+ +G+ PNDVTFLSLL ACSH+G+
Sbjct: 374 AFDEMPNRNVISWTSLITSCAQHGFGEDAVTLFARMEEDGVKPNDVTFLSLLSACSHSGM 433
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
+G E FT M++KY I PR +H+S VDL AR GQLE A+ +++ N + +S++ +L
Sbjct: 434 MNKGMEYFTSMMSKYGIDPRFKHYSSAVDLLARGGQLEDAWMLVQNTNTECKSSMYGTML 493
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
GAC ++GN LGE AA+NL ++PE SVNY VL+N+Y + W++A++TRKL+ E S K
Sbjct: 494 GACKVHGNMPLGETAAKNLLSIDPESSVNYAVLANMYAESHLWEDAQRTRKLLVETSKGK 553
Query: 571 NPGYSFL 577
G+S +
Sbjct: 554 EAGFSVI 560
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 184/360 (51%), Gaps = 5/360 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ S ++ C + R IHA + ++ + + ++ + + G V AR+ F M
Sbjct: 116 TFGSAVRACTGARCARSGEQIHACAAKGRFAGDMFVQSALMDMHLRCGSVGDARRLFAEM 175
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
+++VSW +++ G+ + + +AL +F +MLR G+ + FT+ SAL+AC + L
Sbjct: 176 ERKDLVSWNSLMRGFVEREHCNDALGLFDSMLRDGMLPDHFTFGSALKACGAISVLFNVE 235
Query: 152 MIQGSIQK-GRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM- 209
+I I K G + EN+ + S L+D YAKC + A ++++ + D+VS A+I G +M
Sbjct: 236 LIHACIIKLGYWDENVAIAS-LIDSYAKCRSLSSARVIYDSMCEPDLVSSTALISGYSMD 294
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
+ ++DD+ LF + R+G++ D L S+L + +QIH + K L
Sbjct: 295 RNYSDDAMKLFCKIHRKGLRIDAILLSSLLGVCANVASIKFGTQIHAYMHKKQPMGDLAL 354
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+L+D+YAK G + + + M ++IS T+LI+ A+ ++A LF M
Sbjct: 355 DNALVDMYAKSGEFLDSRRAFDEMPNRNVISWTSLITSCAQ-HGFGEDAVTLFARMEEDG 413
Query: 330 MGIDDVILCLMLNICANVASLNLGRQ-IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ +DV +L+ C++ +N G + + KY ++ +D+ A+ G++ DA
Sbjct: 414 VKPNDVTFLSLLSACSHSGMMNKGMEYFTSMMSKYGIDPRFKHYSSAVDLLARGGQLEDA 473
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 145/269 (53%), Gaps = 4/269 (1%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGY-ESNLHLSTKVIIFYAKVGDVLSAR 85
L D T+ S L+ C LIHA II GY + N+ +++ +I YAK + SAR
Sbjct: 212 LPDHFTFGSALKACGAISVLFNVELIHACIIKLGYWDENVAIAS-LIDSYAKCRSLSSAR 270
Query: 86 KAFDRMPERNVVSWTAMISGYAQN-GYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
+D M E ++VS TA+ISGY+ + Y ++A+ +F + R G+R + SS L CA +
Sbjct: 271 VIYDSMCEPDLVSSTALISGYSMDRNYSDDAMKLFCKIHRKGLRIDAILLSSLLGVCANV 330
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
++ G I + K + + +L + +AL+D+YAK G D+ F+ + ++V+SW ++I
Sbjct: 331 ASIKFGTQIHAYMHKKQPMGDLALDNALVDMYAKSGEFLDSRRAFDEMPNRNVISWTSLI 390
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGL 263
A GF +D+ LF M G+KP+ T S+L A S G+ + ++ K G+
Sbjct: 391 TSCAQHGFGEDAVTLFARMEEDGVKPNDVTFLSLLSACSHSGMMNKGMEYFTSMMSKYGI 450
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRS 292
+ K S +D+ A+ G + A+ L ++
Sbjct: 451 DPRFKHYSSAVDLLARGGQLEDAWMLVQN 479
>gi|242095158|ref|XP_002438069.1| hypothetical protein SORBIDRAFT_10g007640 [Sorghum bicolor]
gi|241916292|gb|EER89436.1| hypothetical protein SORBIDRAFT_10g007640 [Sorghum bicolor]
Length = 563
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 270/550 (49%), Positives = 368/550 (66%), Gaps = 5/550 (0%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAH-IITNGYESN----LHLSTKVIIFYAKVGDVLSARKA 87
Y SLLQ CI A RQ +H IIT + + LHLSTK+++FY+ GDV +AR
Sbjct: 14 YSSLLQSCIGANAFRQGKSVHHRAIITASSDPSPPDLLHLSTKLVMFYSHFGDVAAARAV 73
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD MP R+VVSWTAM+SGYA+NG AL +F+ MLRSG R NQFT+ SA RACA R
Sbjct: 74 FDGMPHRSVVSWTAMVSGYAKNGRAPEALELFALMLRSGARPNQFTFGSAARACAGGRCA 133
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G + KGR ++FV+SAL+D++ +CG + DA LF +ERKD+VSWNA++ G
Sbjct: 134 RSGEQVHACAAKGRHAGDMFVQSALMDMHLRCGSVGDARRLFAEMERKDLVSWNALMRGF 193
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
+G D+ LF SM+R GM PD FT GS L+A + + IH IIKLG
Sbjct: 194 VERGHYSDALGLFASMLRDGMLPDHFTFGSALKACGAISVIFNVELIHTCIIKLGYWDEK 253
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
T SLID YAK S+ SA +Y S+ + D++S TALIS + D N+S++A LF +
Sbjct: 254 VATASLIDSYAKCRSLSSARVIYDSICEPDLVSSTALISDHSMDRNYSEDAMKLFCKIHR 313
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ + ID ++L +L +CANVAS+ G QIHA+ K Q D A+ NAL+DMYAKSGE D
Sbjct: 314 EGLRIDGILLSALLGVCANVASIKFGTQIHAYMHKKQPMGDLALDNALVDMYAKSGEYLD 373
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
+ RAFDEM +NVISWTSLI A+HG+G +A+ L+ +M+ +G+ PNDVTFLSLL ACSH
Sbjct: 374 SRRAFDEMPSRNVISWTSLITACAQHGFGEDAVTLFARMEEDGVKPNDVTFLSLLSACSH 433
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
+G+ +G E FT M+NKY I PRA+H+S +DL AR GQLE A+ ++++ N + +S++
Sbjct: 434 SGMMNKGMEYFTSMMNKYGIDPRAKHYSSAIDLLARGGQLEDAWMLLQKTNTECKSSMYG 493
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
A+LGAC ++GN LGE AA NLF ++P+ SVNY VL+N+Y + W++A++TRKL+ E S
Sbjct: 494 AMLGACKVHGNIPLGETAANNLFSIDPKSSVNYAVLANMYAESCLWEDAQRTRKLLAETS 553
Query: 568 LRKNPGYSFL 577
K G+S +
Sbjct: 554 KGKEVGFSVI 563
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 182/359 (50%), Gaps = 3/359 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ S + C + R +HA + ++ + + ++ + + G V AR+ F M
Sbjct: 119 TFGSAARACAGGRCARSGEQVHACAAKGRHAGDMFVQSALMDMHLRCGSVGDARRLFAEM 178
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
+++VSW A++ G+ + G+ +AL +F++MLR G+ + FT+ SAL+AC + +
Sbjct: 179 ERKDLVSWNALMRGFVERGHYSDALGLFASMLRDGMLPDHFTFGSALKACGAISVIFNVE 238
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM-Q 210
+I I K + + ++L+D YAKC + A ++++ I D+VS A+I +M +
Sbjct: 239 LIHTCIIKLGYWDEKVATASLIDSYAKCRSLSSARVIYDSICEPDLVSSTALISDHSMDR 298
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
+++D+ LF + R+G++ D L ++L + +QIH + K L
Sbjct: 299 NYSEDAMKLFCKIHREGLRIDGILLSALLGVCANVASIKFGTQIHAYMHKKQPMGDLALD 358
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
+L+D+YAK G + + + M ++IS T+LI+ A+ ++A LF M +
Sbjct: 359 NALVDMYAKSGEYLDSRRAFDEMPSRNVISWTSLITACAQ-HGFGEDAVTLFARMEEDGV 417
Query: 331 GIDDVILCLMLNICANVASLNLGRQ-IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+DV +L+ C++ +N G + + KY A ++ ID+ A+ G++ DA
Sbjct: 418 KPNDVTFLSLLSACSHSGMMNKGMEYFTSMMNKYGIDPRAKHYSSAIDLLARGGQLEDA 476
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 136/265 (51%), Gaps = 2/265 (0%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L D T+ S L+ C LIH II GY + +I YAK + SAR
Sbjct: 215 LPDHFTFGSALKACGAISVIFNVELIHTCIIKLGYWDEKVATASLIDSYAKCRSLSSARV 274
Query: 87 AFDRMPERNVVSWTAMISGYAQN-GYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
+D + E ++VS TA+IS ++ + Y E+A+ +F + R G+R + S+ L CA +
Sbjct: 275 IYDSICEPDLVSSTALISDHSMDRNYSEDAMKLFCKIHREGLRIDGILLSALLGVCANVA 334
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
++ G I + K + + +L + +AL+D+YAK G D+ F+ + ++V+SW ++I
Sbjct: 335 SIKFGTQIHAYMHKKQPMGDLALDNALVDMYAKSGEYLDSRRAFDEMPSRNVISWTSLIT 394
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLE 264
A GF +D+ LF M G+KP+ T S+L A S G+ + ++ K G++
Sbjct: 395 ACAQHGFGEDAVTLFARMEEDGVKPNDVTFLSLLSACSHSGMMNKGMEYFTSMMNKYGID 454
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQL 289
K S ID+ A+ G + A+ L
Sbjct: 455 PRAKHYSSAIDLLARGGQLEDAWML 479
>gi|116312013|emb|CAJ86370.1| OSIGBa0117N13.14 [Oryza sativa Indica Group]
gi|116312056|emb|CAJ86420.1| H0303G06.9 [Oryza sativa Indica Group]
Length = 559
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 268/547 (48%), Positives = 371/547 (67%), Gaps = 3/547 (0%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIIT-NGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
Y SLLQ CI A RQ +H + + +LHLSTK+IIFYA+ GDV +ARK FD M
Sbjct: 14 YSSLLQCCISSCAFRQGKSVHGRVAAASASPPDLHLSTKLIIFYARFGDVAAARKMFDGM 73
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P R+VVSWTAM+SGYA+NG AL +F+ M SG R NQFTY SA ACA + G
Sbjct: 74 PHRSVVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACAGAGCARSGE 133
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ KGRF ++FV+SAL+D++ +CG +EDA LF + +KDVVSWNA+I G +G
Sbjct: 134 QVHACAAKGRFAGDMFVQSALMDMHLRCGSVEDARQLFAEMGKKDVVSWNALIRGFVERG 193
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLT 270
+ D+ LF SM+++ M PD +TLGS L+A + G+ + + IH IIKLG +
Sbjct: 194 HDGDALGLFSSMLKEAMIPDHYTLGSALKACGIVGVAV-NVELIHSCIIKLGYWDEKVVI 252
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
GSLI+ YAK S+ SA +Y S+ + D++S TALISG+ D N+S++A +LF + K +
Sbjct: 253 GSLINSYAKCRSMSSARVIYDSISEPDLVSSTALISGYTMDRNYSEDAMELFCKIHRKGL 312
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
ID V+L +L +CA+VAS G QIHA+ K QS D A+ NAL+DMYAK+GE +DA R
Sbjct: 313 WIDGVLLSSVLCLCASVASARFGTQIHAYMCKKQSMGDIALDNALVDMYAKAGEFSDAKR 372
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
AFDEM +NVISWTSLI ++G G +A+ L+ +M +G+ PNDVTFLSLL AC H GL
Sbjct: 373 AFDEMPYRNVISWTSLITACGRNGSGEDAVTLFNRMVEDGVRPNDVTFLSLLSACGHCGL 432
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
T +G E FT M+++Y I PRAEH+S +DL AR GQLE A+ ++++ N+KP +S+ A+L
Sbjct: 433 TNKGMEYFTSMMSRYGIDPRAEHYSSAIDLLARGGQLEDAWKLVQKTNLKPNSSMLGAML 492
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
GAC ++GN LGE AA+NLF ++P SVNY VL+N+Y W++A++TR++++E + K
Sbjct: 493 GACKLHGNMLLGETAAKNLFSIDPGSSVNYAVLANMYAECSLWEDAQRTREVIDETTDGK 552
Query: 571 NPGYSFL 577
G+S +
Sbjct: 553 EVGFSVI 559
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 142/293 (48%), Gaps = 4/293 (1%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITNG 60
++R + G AL S + P Y S L+ C LIH+ II G
Sbjct: 185 LIRGFVERGHDGDALGLFSSMLKEAMIPDHYTLGSALKACGIVGVAVNVELIHSCIIKLG 244
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQN-GYDENALLVF 119
Y + +I YAK + SAR +D + E ++VS TA+ISGY + Y E+A+ +F
Sbjct: 245 YWDEKVVIGSLINSYAKCRSMSSARVIYDSISEPDLVSSTALISGYTMDRNYSEDAMELF 304
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
+ R G+ + SS L CA + + G I + K + + ++ + +AL+D+YAK
Sbjct: 305 CKIHRKGLWIDGVLLSSVLCLCASVASARFGTQIHAYMCKKQSMGDIALDNALVDMYAKA 364
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G DA F+ + ++V+SW ++I G +D+ LF M+ G++P+ T S+L
Sbjct: 365 GEFSDAKRAFDEMPYRNVISWTSLITACGRNGSGEDAVTLFNRMVEDGVRPNDVTFLSLL 424
Query: 240 RA-SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
A G+ + ++ + G++ + S ID+ A+ G + A++L +
Sbjct: 425 SACGHCGLTNKGMEYFTSMMSRYGIDPRAEHYSSAIDLLARGGQLEDAWKLVQ 477
>gi|39546235|emb|CAE04244.3| OSJNBa0089N06.5 [Oryza sativa Japonica Group]
gi|125549842|gb|EAY95664.1| hypothetical protein OsI_17530 [Oryza sativa Indica Group]
gi|215686910|dbj|BAG90780.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 559
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 266/547 (48%), Positives = 370/547 (67%), Gaps = 3/547 (0%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIIT-NGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
Y SLLQ CI A RQ +H + + +LHLSTK++IFYA+ GDV +ARK FD M
Sbjct: 14 YSSLLQCCISSCAFRQGKSVHGRVAAASASPPDLHLSTKLVIFYARFGDVAAARKVFDGM 73
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P R+VVSWTAM+SGYA+NG AL +F+ M SG R NQFTY SA ACA + G
Sbjct: 74 PHRSVVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACAGAGCARSGE 133
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ KGRF ++FV+SAL+D++ +CG +EDA LF + +KDVVSWNA+I G +G
Sbjct: 134 QVHACAAKGRFAGDMFVQSALMDMHLRCGSVEDARQLFAEMGKKDVVSWNALIRGFVERG 193
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLT 270
+ D+ LF SM+++ M PD +TLGS L+A + G+ + + IH IIKLG +
Sbjct: 194 HDGDALGLFSSMLKEAMIPDHYTLGSALKACGIVGVAV-NVELIHSCIIKLGYWDEKVVI 252
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
GSLI+ YAK S+ SA +Y S+ + D++S TALISG+ D N+S++A +LF + K +
Sbjct: 253 GSLINSYAKCRSMSSARVIYDSISEPDLVSSTALISGYTMDRNYSEDAMELFCKIHRKGL 312
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
ID V+L +L +CA+VAS G QIHA+ K Q D A+ NAL+DMYAK+GE +DA R
Sbjct: 313 WIDGVLLSSVLCLCASVASARFGTQIHAYMCKKQPMGDIALDNALVDMYAKAGEFSDAKR 372
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
AFDEM +NVISWTSLI ++G G +A+ L+ +M +G+ PNDVTFLSLL AC H GL
Sbjct: 373 AFDEMPYRNVISWTSLITACGRNGSGEDAVTLFNRMVEDGVRPNDVTFLSLLSACGHCGL 432
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
T +G E FT M+++Y I PRAEH+S +DL AR GQLE A+ ++++ N+KP +S+ A+L
Sbjct: 433 TNKGMEYFTSMMSRYGIDPRAEHYSSAIDLLARGGQLEDAWKLVQKTNLKPNSSMLGAML 492
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
GAC ++GN LGE AA+NLF ++P SVNY VL+N+Y W++A++TR++++E + K
Sbjct: 493 GACKLHGNMLLGETAAKNLFSIDPGSSVNYAVLANMYAECSLWEDAQRTREVIDETTDGK 552
Query: 571 NPGYSFL 577
G+S +
Sbjct: 553 EVGFSVI 559
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 142/293 (48%), Gaps = 4/293 (1%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITNG 60
++R + G AL S + P Y S L+ C LIH+ II G
Sbjct: 185 LIRGFVERGHDGDALGLFSSMLKEAMIPDHYTLGSALKACGIVGVAVNVELIHSCIIKLG 244
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQN-GYDENALLVF 119
Y + +I YAK + SAR +D + E ++VS TA+ISGY + Y E+A+ +F
Sbjct: 245 YWDEKVVIGSLINSYAKCRSMSSARVIYDSISEPDLVSSTALISGYTMDRNYSEDAMELF 304
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
+ R G+ + SS L CA + + G I + K + + ++ + +AL+D+YAK
Sbjct: 305 CKIHRKGLWIDGVLLSSVLCLCASVASARFGTQIHAYMCKKQPMGDIALDNALVDMYAKA 364
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G DA F+ + ++V+SW ++I G +D+ LF M+ G++P+ T S+L
Sbjct: 365 GEFSDAKRAFDEMPYRNVISWTSLITACGRNGSGEDAVTLFNRMVEDGVRPNDVTFLSLL 424
Query: 240 RA-SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
A G+ + ++ + G++ + S ID+ A+ G + A++L +
Sbjct: 425 SACGHCGLTNKGMEYFTSMMSRYGIDPRAEHYSSAIDLLARGGQLEDAWKLVQ 477
>gi|222629606|gb|EEE61738.1| hypothetical protein OsJ_16261 [Oryza sativa Japonica Group]
Length = 767
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 243/535 (45%), Positives = 347/535 (64%), Gaps = 5/535 (0%)
Query: 46 ERQAHLIHAHIITNGYESNLHL--STKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMI 103
ERQ + +LHL + ++ AR + + P R++VSWTAM+
Sbjct: 235 ERQIRSTAGSPPVTAFPPDLHLRHQARHLLGAVSAKSPPPARCSME-CPHRSLVSWTAMV 293
Query: 104 SGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFV 163
SGYA+NG AL +F+ M SG R NQFTY SA ACA + G + KGRF
Sbjct: 294 SGYARNGRPREALELFALMRASGARPNQFTYGSAASACAGAGCARSGEQVHACAAKGRFA 353
Query: 164 ENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM 223
++FV+SAL+D++ +CG +EDA LF + +KDVVSWNA+I G +G + D+ LF SM
Sbjct: 354 GDMFVQSALMDMHLRCGSVEDARQLFAEMGKKDVVSWNALIRGFVERGHDGDALGLFSSM 413
Query: 224 MRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGS 282
+++ M PD +TLGS L+A + G+ + + IH IIKLG + GSLI+ YAK S
Sbjct: 414 LKEAMIPDHYTLGSALKACGIVGVAV-NVELIHSCIIKLGYWDEKVVIGSLINSYAKCRS 472
Query: 283 IRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLN 342
+ SA +Y S+ + D++S TALISG+ D N+S++A +LF + K + ID V+L +L
Sbjct: 473 MSSARVIYDSISEPDLVSSTALISGYTMDRNYSEDAMELFCKIHRKGLWIDGVLLSSVLC 532
Query: 343 ICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVIS 402
+CA+VAS G QIHA+ K Q D A+ NAL+DMYAK+GE +DA RAFDEM +NVIS
Sbjct: 533 LCASVASARFGTQIHAYMCKKQPMGDIALDNALVDMYAKAGEFSDAKRAFDEMPYRNVIS 592
Query: 403 WTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI 462
WTSLI ++G G +A+ L+ +M +G+ PNDVTFLSLL AC H GLT +G E FT M+
Sbjct: 593 WTSLITACGRNGSGEDAVTLFNRMVEDGVRPNDVTFLSLLSACGHCGLTNKGMEYFTSMM 652
Query: 463 NKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLG 522
++Y I PRAEH+S +DL AR GQLE A+ ++++ N+KP +S+ A+LGAC ++GN LG
Sbjct: 653 SRYGIDPRAEHYSSAIDLLARGGQLEDAWKLVQKTNLKPNSSMLGAMLGACKLHGNMLLG 712
Query: 523 ELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
E AA+NLF ++P SVNY VL+N+Y W++A++TR++++E + K G+S +
Sbjct: 713 ETAAKNLFSIDPGSSVNYAVLANMYAECSLWEDAQRTREVIDETTDGKEVGFSVI 767
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 147/419 (35%), Positives = 215/419 (51%), Gaps = 46/419 (10%)
Query: 36 LLQFCIDKKAERQAHLIHAHIIT-NGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
LL CI A RQ +H + + +LHLSTK++IFYA+ GDV +ARK FD MP R
Sbjct: 63 LLLCCISSCAFRQGKSVHGRVAAASASPPDLHLSTKLVIFYARFGDVAAARKVFDGMPHR 122
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
+VVSWTAM+SGYA+NG AL +F+ M SG R NQFTY SA ACA + G +
Sbjct: 123 SVVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACAGAGCARSGEQVH 182
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND 214
KGRF ++FV+SAL+D++ +CG +EDA LF + +KDV ++
Sbjct: 183 ACAAKGRFAGDMFVQSALMDMHLRCGSVEDARQLFAEMGKKDVCCISS------------ 230
Query: 215 DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLI 274
W F RQ +R++ G + DL ++ + L G++
Sbjct: 231 ---WQFPE--RQ------------IRSTAGSPPVTAFPP--DLHLR---HQARHLLGAV- 267
Query: 275 DVYAKYGSIRSAYQLYRSM--LKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI 332
S +S SM ++S TA++SG+AR + +EA +LF M
Sbjct: 268 -------SAKSPPPARCSMECPHRSLVSWTAMVSGYAR-NGRPREALELFALMRASGARP 319
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAF 392
+ + CA G Q+HA A K + + D V +AL+DM+ + G + DA + F
Sbjct: 320 NQFTYGSAASACAGAGCARSGEQVHACAAKGRFAGDMFVQSALMDMHLRCGSVEDARQLF 379
Query: 393 DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLT 451
EMG K+V+SW +LI G+ + G+ +A+ L+ M E M+P+ T S L AC G+
Sbjct: 380 AEMGKKDVVSWNALIRGFVERGHDGDALGLFSSMLKEAMIPDHYTLGSALKACGIVGVA 438
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 141/291 (48%), Gaps = 4/291 (1%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITNG 60
++R + G AL S + P Y S L+ C LIH+ II G
Sbjct: 393 LIRGFVERGHDGDALGLFSSMLKEAMIPDHYTLGSALKACGIVGVAVNVELIHSCIIKLG 452
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQN-GYDENALLVF 119
Y + +I YAK + SAR +D + E ++VS TA+ISGY + Y E+A+ +F
Sbjct: 453 YWDEKVVIGSLINSYAKCRSMSSARVIYDSISEPDLVSSTALISGYTMDRNYSEDAMELF 512
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
+ R G+ + SS L CA + + G I + K + + ++ + +AL+D+YAK
Sbjct: 513 CKIHRKGLWIDGVLLSSVLCLCASVASARFGTQIHAYMCKKQPMGDIALDNALVDMYAKA 572
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G DA F+ + ++V+SW ++I G +D+ LF M+ G++P+ T S+L
Sbjct: 573 GEFSDAKRAFDEMPYRNVISWTSLITACGRNGSGEDAVTLFNRMVEDGVRPNDVTFLSLL 632
Query: 240 RA-SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
A G+ + ++ + G++ + S ID+ A+ G + A++L
Sbjct: 633 SACGHCGLTNKGMEYFTSMMSRYGIDPRAEHYSSAIDLLARGGQLEDAWKL 683
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 91/179 (50%), Gaps = 2/179 (1%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
S+L C + R IHA++ ++ L ++ YAK G+ A++AFD MP R
Sbjct: 529 SVLCLCASVASARFGTQIHAYMCKKQPMGDIALDNALVDMYAKAGEFSDAKRAFDEMPYR 588
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
NV+SWT++I+ +NG E+A+ +F+ M+ GVR N T+ S L AC G
Sbjct: 589 NVISWTSLITACGRNGSGEDAVTLFNRMVEDGVRPNDVTFLSLLSACGHCGLTNKGMEYF 648
Query: 155 GSIQKGRFVENLFVK-SALLDLYAKCGWIEDAWILFERIERKDVVSW-NAMIGGLAMQG 211
S+ ++ S+ +DL A+ G +EDAW L ++ K S AM+G + G
Sbjct: 649 TSMMSRYGIDPRAEHYSSAIDLLARGGQLEDAWKLVQKTNLKPNSSMLGAMLGACKLHG 707
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 147/363 (40%), Gaps = 49/363 (13%)
Query: 154 QGSIQKGRFV------ENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
QG GR +L + + L+ YA+ G + A +F+ + + VVSW AM+ G
Sbjct: 75 QGKSVHGRVAAASASPPDLHLSTKLVIFYARFGDVAAARKVFDGMPHRSVVSWTAMVSGY 134
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A G ++ LF M G +P+ FT GS A G Q+H K
Sbjct: 135 ARNGRPREALELFALMRASGARPNQFTYGSAASACAGAGCARSGEQVHACAAKGRFAGDM 194
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ +L+D++ + GS+ A QL+ M K D+ + ++ + I
Sbjct: 195 FVQSALMDMHLRCGSVEDARQLFAEMGKKDVCCIS---------------SWQFPERQIR 239
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
G V A L+L Q + A S +
Sbjct: 240 STAGSPPVT--------AFPPDLHLRHQARHL------------------LGAVSAKSPP 273
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
R E ++++SWT++++GYA++G EA+EL+ M+ G PN T+ S AC+
Sbjct: 274 PARCSMECPHRSLVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACAG 333
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
G G ++ K R S ++D+ R G +E A + +M K S W+
Sbjct: 334 AGCARSGEQVHA-CAAKGRFAGDMFVQSALMDMHLRCGSVEDARQLFAEMGKKDVVS-WN 391
Query: 508 AIL 510
A++
Sbjct: 392 ALI 394
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 336 ILCLMLNICANVASLNLGRQIHA-FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE 394
I +L C + + G+ +H A S D + L+ YA+ G++A A + FD
Sbjct: 59 IFRFLLLCCISSCAFRQGKSVHGRVAAASASPPDLHLSTKLVIFYARFGDVAAARKVFDG 118
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTF 438
M ++V+SWT++++GYA++G EA+EL+ M+ G PN T+
Sbjct: 119 MPHRSVVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTY 162
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/551 (38%), Positives = 331/551 (60%), Gaps = 1/551 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
TY+S+L A + +H+ I+ G+ES+ + T ++ YAK G R+ F+++
Sbjct: 229 TYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKL 288
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
R++++W MI G A+ GY E A V++ M R GV N+ TY L AC L G+
Sbjct: 289 VNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGK 348
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I + K F ++ V++AL+ +Y++CG I+DA ++F+++ RKDV+SW AMIGGLA G
Sbjct: 349 EIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSG 408
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
F ++ +++ M + G++P+ T SIL A L +IH +++ GL + +
Sbjct: 409 FGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGN 468
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
+L+++Y+ GS++ A Q++ M++ DI++ A+I G+A N KEA LF + + +
Sbjct: 469 TLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAH-NLGKEALKLFDRLQEEGLK 527
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
D V MLN CAN SL R+IH K D +VGNAL+ YAK G +DA+
Sbjct: 528 PDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIV 587
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLT 451
F++M +NVISW ++I G A+HG G +A++L+++MK EG+ P+ VTF+SLL ACSH GL
Sbjct: 588 FEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLL 647
Query: 452 CEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
EG F M + I+P EH+ C+VDL R GQL+ A +I+ M + +W A+LG
Sbjct: 648 EEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLG 707
Query: 512 ACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKN 571
AC I+GN + E AA + ++ + +V YV LS++Y AAG WD+A K RKLME+R + K
Sbjct: 708 ACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKE 767
Query: 572 PGYSFLQSSKK 582
PG S++Q K
Sbjct: 768 PGRSWIQVGDK 778
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 172/563 (30%), Positives = 296/563 (52%), Gaps = 14/563 (2%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDP--STYMSLLQFCIDKKAERQAHLIHAHIITNG 60
+V + G +++ALK L P +T MS L C A IH + G
Sbjct: 97 MVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAG 156
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
++ ++ ++ YAK G + AR+ FD+M +++VVSWT I GYA G E A +F
Sbjct: 157 LLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQ 216
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M + GV N+ TY S L A + L+ G+ + I + V +AL+ +YAKCG
Sbjct: 217 KMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCG 276
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+D +FE++ +D+++WN MIGGLA G+ +++ ++ M R+G+ P+ T +L
Sbjct: 277 SYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLN 336
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
A V L +IH + K G S + +LI +Y++ GSI+ A ++ M++ D+IS
Sbjct: 337 ACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVIS 396
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
TA+I G A+ EA ++++M + + V +LN C++ A+L GR+IH
Sbjct: 397 WTAMIGGLAK-SGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQV 455
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
+ + DA VGN L++MY+ G + DA + FD M ++++++ ++I GYA H G EA+
Sbjct: 456 VEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEAL 515
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDL 480
+L+ +++ EG+ P+ VT++++L AC+++G E+ T ++ K + +V
Sbjct: 516 KLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHT-LVRKGGFFSDTSVGNALVST 574
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD---MEPEKS 537
+A+ G A + +M + S W+AI+G + +G A LF+ ME K
Sbjct: 575 YAKCGSFSDASIVFEKMTKRNVIS-WNAIIGGSAQHGRGQ----DALQLFERMKMEGVKP 629
Query: 538 --VNYVVLSNIYTAAGAWDNARK 558
V +V L + + AG + R+
Sbjct: 630 DIVTFVSLLSACSHAGLLEEGRR 652
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 169/546 (30%), Positives = 298/546 (54%), Gaps = 16/546 (2%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
++ S YM +L+ CI+ K +H HII + + + +I Y + G + AR+
Sbjct: 21 VNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQV 80
Query: 88 FDRMP--ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
+ ++ ER V SW AM+ GY Q GY E AL + M + G+ ++ T S L +C
Sbjct: 81 WKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPG 140
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
L+ GR I + + ++ V + +L++YAKCG IE+A +F+++E+K VVSW IG
Sbjct: 141 ALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIG 200
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
G A G ++ +F +F+ M ++G+ P+ T S+L A L +H I+ G ES
Sbjct: 201 GYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHES 260
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ +L+ +YAK GS + Q++ ++ D+I+ +I G A + + +EA +++ M
Sbjct: 261 DTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLA-EGGYWEEASEVYNQM 319
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ + + + ++LN C N A+L+ G++IH+ K + D V NALI MY++ G I
Sbjct: 320 QREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSI 379
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
DA FD+M K+VISWT++I G AK G+G EA+ +Y++M+ G+ PN VT+ S+L AC
Sbjct: 380 KDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNAC 439
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
S G + ++ + + A + +V++++ G ++ A + +M I+
Sbjct: 440 SSPAALEWGRRIHQQVV-EAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRM-IQRDIVA 497
Query: 506 WSAILGACSIYGNTSLGELAARNLFD------MEPEKSVNYVVLSNIYTAAGAWDNARKT 559
++A++G Y +LG+ A + LFD ++P+K V Y+ + N +G+ + AR+
Sbjct: 498 YNAMIGG---YAAHNLGKEALK-LFDRLQEEGLKPDK-VTYINMLNACANSGSLEWAREI 552
Query: 560 RKLMEE 565
L+ +
Sbjct: 553 HTLVRK 558
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 134/463 (28%), Positives = 242/463 (52%), Gaps = 14/463 (3%)
Query: 113 ENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSAL 172
+ A+ V + + G + N Y L+ C ++ L GR + I + R V + + +AL
Sbjct: 5 DGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNAL 64
Query: 173 LDLYAKCGWIEDA---WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
+++Y +CG IE+A W +ER V SWNAM+ G G+ + + L R M + G+
Sbjct: 65 INMYIQCGSIEEARQVWKKLSYMERT-VHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLA 123
Query: 230 PDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
PD T+ S L + S G +E + +IH ++ GL K+ ++++YAK GSI A
Sbjct: 124 PDRTTIMSFLSSCKSPGALEWGR--EIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAR 181
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
+++ M K ++S T I G+A D S+ AF++F+ M + + + + +LN ++
Sbjct: 182 EVFDKMEKKSVVSWTITIGGYA-DCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSP 240
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI 407
A+L G+ +H+ D AVG AL+ MYAK G D + F+++ ++++I+W ++I
Sbjct: 241 AALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMI 300
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRI 467
G A+ GY EA E+Y +M+ EG++PN +T++ LL AC ++ G E+ + + K
Sbjct: 301 GGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHS-RVAKAGF 359
Query: 468 LPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG--ACSIYGNTSLGELA 525
+ ++ +++R G ++ A + +M K S W+A++G A S +G +L
Sbjct: 360 TSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVIS-WTAMIGGLAKSGFGAEALTVYQ 418
Query: 526 ARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+EP + V Y + N ++ A + R+ + + E L
Sbjct: 419 EMQQAGVEPNR-VTYTSILNACSSPAALEWGRRIHQQVVEAGL 460
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/571 (35%), Positives = 345/571 (60%), Gaps = 3/571 (0%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K G +AL+ T ++P ++S+++ C + + +H II G+ES++
Sbjct: 97 KNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVI 156
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ T + Y K G + +AR+ FDRMP+R+VVSW A+I+GY+QNG AL +FS M +G
Sbjct: 157 VGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNG 216
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
++ N T S + CA + L+ G+ I + ++ V + L+++YAKCG + A
Sbjct: 217 IKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAH 276
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
LFER+ +DV SWNA+IGG ++ + ++ F M +G+KP+ T+ S+L A
Sbjct: 277 KLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLF 336
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
L + QIH I+ G ES++ + +L+++YAK G++ SAY+L+ M K ++++ A+IS
Sbjct: 337 ALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIIS 396
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
G+++ H EA LF +M + + D + +L CA+ +L G+QIH + +
Sbjct: 397 GYSQH-GHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFE 455
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
+ VG L+D+YAK G + A + F+ M +++V+SWT++I Y HG+G +A+ L+ KM
Sbjct: 456 SNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKM 515
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
+ G + + F ++L ACSH GL +G + F M + Y + P+ EH++C+VDL R G
Sbjct: 516 QETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGH 575
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
L+ A +I+ M+++P A++W A+LGAC I+ N LGE AA++LF+++P+ + YV+LSNI
Sbjct: 576 LDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNI 635
Query: 547 YTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
Y A W++ K RK+M+E+ ++K PG S +
Sbjct: 636 YAEAQRWEDVAKLRKMMKEKGVKKQPGCSVV 666
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 146/460 (31%), Positives = 254/460 (55%), Gaps = 15/460 (3%)
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
N V W I GY +NG+ AL ++ M R+G+ ++ + S ++AC LQ GR +
Sbjct: 84 NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVH 143
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND 214
I F ++ V +AL +Y KCG +E+A +F+R+ ++DVVSWNA+I G + G
Sbjct: 144 EDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPY 203
Query: 215 DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLI 274
++ LF M G+KP+ TL S++ + L + QIH I+ G+ES + L+
Sbjct: 204 EALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLV 263
Query: 275 DVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD 334
++YAK G++ +A++L+ M D+ S A+I G++ + H EA F M ++ + +
Sbjct: 264 NMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQH-HEALAFFNRMQVRGIKPNS 322
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE 394
+ + +L CA++ +L G+QIH +A + + VGNAL++MYAK G + A + F+
Sbjct: 323 ITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFER 382
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG 454
M KNV++W ++I+GY++HG+ HEA+ L+ +M+ +G+ P+ +S+L AC+H +G
Sbjct: 383 MPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQG 442
Query: 455 WELFTDMINKYRILPRAEHFSCV----VDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
+ I+ Y I E V VD++A+ G + +A + +M + S W+ ++
Sbjct: 443 KQ-----IHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVS-WTTMI 496
Query: 511 GACSIYGNTSLGELAARNLFDM-EPEKSVNYVVLSNIYTA 549
A I+G+ GE A M E ++++ + I TA
Sbjct: 497 LAYGIHGH---GEDALALFSKMQETGTKLDHIAFTAILTA 533
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/551 (38%), Positives = 326/551 (59%), Gaps = 1/551 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
TY+++L A + +H+HI+ G+ES+L + T ++ YAK G R+ F+++
Sbjct: 347 TYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKL 406
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
R++++W MI G A+ G E A ++ M R G+ N+ TY L AC L GR
Sbjct: 407 VNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGR 466
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I + K F+ ++ V++AL+ +YA+CG I+DA +LF ++ RKD++SW AMIGGLA G
Sbjct: 467 EIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSG 526
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
++ +F+ M + G+KP+ T SIL A L +IH +I+ GL + +
Sbjct: 527 LGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVAN 586
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
+L+++Y+ GS++ A Q++ M + DI++ A+I G+A N KEA LF + + +
Sbjct: 587 TLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAH-NLGKEALKLFDRLQEEGLK 645
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
D V MLN CAN SL ++IH+ K D ++GNAL+ YAK G +DA
Sbjct: 646 PDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLV 705
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLT 451
FD+M +NVISW ++I G A+HG G + ++L+++MK EG+ P+ VTF+SLL ACSH GL
Sbjct: 706 FDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLL 765
Query: 452 CEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
EG F M + I P EH+ C+VDL R GQL+ +I+ M + +W A+LG
Sbjct: 766 EEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLG 825
Query: 512 ACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKN 571
AC I+GN + E AA + ++P+ + YV LS++Y AAG WD+A K RKLME+R + K
Sbjct: 826 ACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKE 885
Query: 572 PGYSFLQSSKK 582
PG S+++ K
Sbjct: 886 PGRSWIEVGDK 896
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 170/551 (30%), Positives = 294/551 (53%), Gaps = 6/551 (1%)
Query: 11 GQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLS 68
G +++ALK + L +T M LL C A IH + +++++
Sbjct: 223 GYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVA 282
Query: 69 TKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR 128
++ YAK G + AR+ FD+M ++VVSWT +I GYA G+ E A +F M + GV
Sbjct: 283 NCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVV 342
Query: 129 ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWIL 188
N+ TY + L A + L+ G+ + I +L V +AL+ +YAKCG +D +
Sbjct: 343 PNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQV 402
Query: 189 FERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIEL 248
FE++ +D+++WN MIGGLA G +++ ++ M R+GM P+ T +L A V L
Sbjct: 403 FEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTAL 462
Query: 249 MKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGF 308
+IH ++K G + +LI +YA+ GSI+ A L+ M++ DIIS TA+I G
Sbjct: 463 HWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGL 522
Query: 309 ARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYD 368
A+ EA +F+DM + + V +LN C++ A+L+ GR+IH + + D
Sbjct: 523 AK-SGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATD 581
Query: 369 AAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKH 428
A V N L++MY+ G + DA + FD M ++++++ ++I GYA H G EA++L+ +++
Sbjct: 582 AHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQE 641
Query: 429 EGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLE 488
EG+ P+ VT++++L AC+++G + E + ++ K L + +V +A+ G
Sbjct: 642 EGLKPDKVTYINMLNACANSG-SLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFS 700
Query: 489 SAYNMIRQMNIKPTASLWSAILGACSIYG-NTSLGELAARNLFDMEPEKSVNYVVLSNIY 547
A + +M +K W+AI+G C+ +G + +L R + V +V L +
Sbjct: 701 DALLVFDKM-MKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSAC 759
Query: 548 TAAGAWDNARK 558
+ AG + R+
Sbjct: 760 SHAGLLEEGRR 770
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 167/544 (30%), Positives = 293/544 (53%), Gaps = 16/544 (2%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
++ YM +L+ CI+ K +H HII + + + +I Y + G + AR+
Sbjct: 139 VNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQV 198
Query: 88 FDRM--PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
++++ ER V SW AM+ GY Q GY E AL + M + G+ + T L +C
Sbjct: 199 WNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPS 258
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
L+ GR I K R + ++ V + +L++YAKCG I +A +F+++E K VVSW +IG
Sbjct: 259 ALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIG 318
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
G A G ++ +F +F+ M ++G+ P+ T ++L A G L +H I+ G ES
Sbjct: 319 GYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHES 378
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ +L+ +YAK GS + Q++ ++ D+I+ +I G A N +EA +++ M
Sbjct: 379 DLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNW-EEASEIYHQM 437
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ M + + ++LN C N +L+ GR+IH+ K +D +V NALI MYA+ G I
Sbjct: 438 QREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSI 497
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
DA F++M K++ISWT++I G AK G G EA+ +++ M+ G+ PN VT+ S+L AC
Sbjct: 498 KDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNAC 557
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
S G + +I + + A + +V++++ G ++ A + +M + +
Sbjct: 558 SSPAALDWGRRIHQQVI-EAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVA- 615
Query: 506 WSAILGACSIYGNTSLGELAARNLFD------MEPEKSVNYVVLSNIYTAAGAWDNARKT 559
++A++G Y +LG+ A + LFD ++P+K V Y+ + N +G+ + A++
Sbjct: 616 YNAMIGG---YAAHNLGKEALK-LFDRLQEEGLKPDK-VTYINMLNACANSGSLEWAKEI 670
Query: 560 RKLM 563
L+
Sbjct: 671 HSLV 674
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/464 (28%), Positives = 232/464 (50%), Gaps = 16/464 (3%)
Query: 113 ENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSAL 172
+ A+ V + + G R N Y L+ C ++ L GR + I + V + + +AL
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNAL 182
Query: 173 LDLYAKCGWIEDA---WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
+++Y +CG IE+A W ER V SWNAM+ G G+ +++ L R M + G+
Sbjct: 183 INMYIQCGSIEEARQVWNKLNHTERT-VHSWNAMVVGYVQYGYIEEALKLLREMQQHGLA 241
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
T +L + L +IH +K L + ++++YAK GSI A ++
Sbjct: 242 LGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREV 301
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ M ++S T +I G+A D HS+ AF++F+ M + + + + +LN + A+
Sbjct: 302 FDKMETKSVVSWTIIIGGYA-DCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAA 360
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
L G+ +H+ D AVG AL+ MYAK G D + F+++ ++++I+W ++I G
Sbjct: 361 LKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGG 420
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
A+ G EA E+Y +M+ EGM+PN +T++ LL AC + G E+ + ++ +
Sbjct: 421 LAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFD 480
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
+ + ++ ++AR G ++ A + +M K S W+A++G + G LG A
Sbjct: 481 ISVQ-NALISMYARCGSIKDARLLFNKMVRKDIIS-WTAMIGGLAKSG---LGAEALAVF 535
Query: 530 FDME-----PEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
DM+ P + V Y + N ++ A D R+ + + E L
Sbjct: 536 QDMQQAGLKPNR-VTYTSILNACSSPAALDWGRRIHQQVIEAGL 578
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/578 (37%), Positives = 338/578 (58%), Gaps = 8/578 (1%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ G+ KQA + + P ++SLL+ C +A Q +HA + G+++ ++
Sbjct: 289 RHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIY 348
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ T ++ Y K G + A + FD + RNVVSWTAMI+G+AQ+G + A L F+ M+ SG
Sbjct: 349 VGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESG 408
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
+ N+ T+ S L AC+ L+ G+ IQ I + + + V++ALL +YAKCG ++DA
Sbjct: 409 IEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAH 468
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+FE+I +++VV+WNAMI D++ F++++++G+KP+ T SIL
Sbjct: 469 RVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSD 528
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
L +H LI+K GLES ++ +L+ ++ G + SA L+ M K D++S +I+
Sbjct: 529 SLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIA 588
Query: 307 GFARDDNHSKE--AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
GF + H K AFD FK M + D + +LN CA+ +L GR++HA +
Sbjct: 589 GFVQ---HGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAA 645
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
D VG LI MY K G I DA++ F ++ KNV SWTS+IAGYA+HG G EA+EL+
Sbjct: 646 FDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFY 705
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
+M+ EG+ P+ +TF+ L AC+H GL EG F M ++ I PR EH+ C+VDLF R
Sbjct: 706 QMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRA 764
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLS 544
G L A I +M ++P + +W A+LGAC ++ N L E AA+ +++P + +V+LS
Sbjct: 765 GLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILS 824
Query: 545 NIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
NIY AAG W K RK+M +R + K PG S+++ K
Sbjct: 825 NIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGK 862
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 148/514 (28%), Positives = 276/514 (53%), Gaps = 20/514 (3%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T++S+L C D + + ++ I+ G++++L + T +I + K GD+ A K F
Sbjct: 210 DKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVF 269
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D +P R++V+WT+MI+G A++G + A +F M GV+ ++ + S LRAC L+
Sbjct: 270 DNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALE 329
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ + +++ + ++V +A+L +Y KCG +EDA +F+ ++ ++VVSW AMI G A
Sbjct: 330 QGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFA 389
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G D++F F M+ G++P+ T SIL A L + QI D II+ G S ++
Sbjct: 390 QHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDR 449
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +L+ +YAK GS++ A++++ + K ++++ A+I+ + + + + A F+ ++ +
Sbjct: 450 VRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDN-ALATFQALLKE 508
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ + +LN+C + SL LG+ +H K D V NAL+ M+ G++ A
Sbjct: 509 GIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSA 568
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
F++M ++++SW ++IAG+ +HG A + +K M+ G+ P+ +TF LL AC+
Sbjct: 569 KNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASP 628
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSC-------VVDLFARRGQLESAYNMIRQMNIKP 501
EG L + ++ A F C ++ ++ + G +E A+ + ++ K
Sbjct: 629 EALTEGRRL-------HALITEAA-FDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKN 680
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDMEPE 535
S S I G Y G+ A + M+ E
Sbjct: 681 VYSWTSMIAG----YAQHGRGKEALELFYQMQQE 710
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 167/568 (29%), Positives = 289/568 (50%), Gaps = 22/568 (3%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K GQ +A++ + + TY +LLQ CI K I+ HI +G + ++
Sbjct: 87 KAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIF 146
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ +I YAK G+ +SA++ FD M E++V SW ++ GY Q+G E A + M++
Sbjct: 147 MRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDS 206
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
V+ ++ T+ S L ACA R + GR + I K + +LFV +AL++++ KCG I DA
Sbjct: 207 VKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDAT 266
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+F+ + +D+V+W +MI GLA G + LF+ M +G++PD S+LRA
Sbjct: 267 KVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPE 326
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
L + ++H + ++G ++ + +++ +Y K GS+ A +++ + +++S TA+I+
Sbjct: 327 ALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIA 386
Query: 307 GFARDDNHSK--EAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
GFA+ H + EAF F MI + + V +L C++ ++L G+QI +
Sbjct: 387 GFAQ---HGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAG 443
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
D V AL+ MYAK G + DA+R F+++ +NV++W ++I Y +H A+ ++
Sbjct: 444 YGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQ 503
Query: 425 KMKHEGMVPNDVTFLSLLFAC-SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFAR 483
+ EG+ PN TF S+L C S L W F +I K + + +V +F
Sbjct: 504 ALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHF--LIMKAGLESDLHVSNALVSMFVN 561
Query: 484 RGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDM------EPEKS 537
G L SA N+ M + S W+ I+ +G + A + F M +P+K
Sbjct: 562 CGDLMSAKNLFNDMPKRDLVS-WNTIIAGFVQHGKNQV----AFDYFKMMQESGIKPDK- 615
Query: 538 VNYVVLSNIYTAAGAWDNARKTRKLMEE 565
+ + L N + A R+ L+ E
Sbjct: 616 ITFTGLLNACASPEALTEGRRLHALITE 643
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 226/413 (54%), Gaps = 5/413 (1%)
Query: 101 AMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKG 160
A+++ ++ G A+ V + S ++ + TYS+ L+ C + + L G I I+K
Sbjct: 80 AVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKS 139
Query: 161 RFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLF 220
++F+++ L+++YAKCG A +F+ + KDV SWN ++GG G +++F L
Sbjct: 140 GVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLH 199
Query: 221 RSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKY 280
M++ +KPD T S+L A + K ++++LI+K G ++ + +LI+++ K
Sbjct: 200 EQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKC 259
Query: 281 GSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLM 340
G I A +++ ++ D+++ T++I+G AR K+A +LF+ M + + D V +
Sbjct: 260 GDIGDATKVFDNLPTRDLVTWTSMITGLAR-HGRFKQACNLFQRMEEEGVQPDKVAFVSL 318
Query: 341 LNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNV 400
L C + +L G+++HA + + VG A++ MY K G + DA FD + +NV
Sbjct: 319 LRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNV 378
Query: 401 ISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTD 460
+SWT++IAG+A+HG EA + KM G+ PN VTF+S+L ACS G ++
Sbjct: 379 VSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDH 438
Query: 461 MINK-YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
+I Y R + ++ ++A+ G L+ A+ + +++ K W+A++ A
Sbjct: 439 IIEAGYGSDDRVR--TALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMITA 488
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/578 (37%), Positives = 337/578 (58%), Gaps = 8/578 (1%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ G+ KQA + + P ++SLL+ C +A Q +HA + G+++ ++
Sbjct: 289 RHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIY 348
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ T ++ Y K G + A + FD + RNVVSWTAMI+G+AQ+G + A L F+ M+ SG
Sbjct: 349 VGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESG 408
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
+ N+ T+ S L AC+ L+ G+ IQ I + + + V++ALL +YAKCG ++DA
Sbjct: 409 IEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAH 468
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+FE+I +++VV+WNAMI D++ F++++++G+KP+ T SIL
Sbjct: 469 RVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSD 528
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
L +H LI+K GLES ++ +L+ ++ G + SA L+ M K D++S +I+
Sbjct: 529 SLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIA 588
Query: 307 GFARDDNHSKE--AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
GF + H K AFD FK M + D + +LN CA+ +L GR++HA +
Sbjct: 589 GFVQ---HGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAA 645
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
D VG LI MY K G I DA++ F ++ KNV SWTS+I GYA+HG G EA+EL+
Sbjct: 646 FDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFY 705
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
+M+ EG+ P+ +TF+ L AC+H GL EG F M ++ I PR EH+ C+VDLF R
Sbjct: 706 QMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRA 764
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLS 544
G L A I +M ++P + +W A+LGAC ++ N L E AA+ +++P + +V+LS
Sbjct: 765 GLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILS 824
Query: 545 NIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
NIY AAG W K RK+M +R + K PG S+++ K
Sbjct: 825 NIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGK 862
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 148/514 (28%), Positives = 276/514 (53%), Gaps = 20/514 (3%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T++S+L C D + + ++ I+ G++++L + T +I + K GD+ A K F
Sbjct: 210 DKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVF 269
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D +P R++V+WT+MI+G A++G + A +F M GV+ ++ + S LRAC L+
Sbjct: 270 DNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALE 329
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ + +++ + ++V +A+L +Y KCG +EDA +F+ ++ ++VVSW AMI G A
Sbjct: 330 QGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFA 389
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G D++F F M+ G++P+ T SIL A L + QI D II+ G S ++
Sbjct: 390 QHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDR 449
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +L+ +YAK GS++ A++++ + K ++++ A+I+ + + + + A F+ ++ +
Sbjct: 450 VRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDN-ALATFQALLKE 508
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ + +LN+C + SL LG+ +H K D V NAL+ M+ G++ A
Sbjct: 509 GIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSA 568
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
F++M ++++SW ++IAG+ +HG A + +K M+ G+ P+ +TF LL AC+
Sbjct: 569 KNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASP 628
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSC-------VVDLFARRGQLESAYNMIRQMNIKP 501
EG L + ++ A F C ++ ++ + G +E A+ + ++ K
Sbjct: 629 EALTEGRRL-------HALITEAA-FDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKN 680
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDMEPE 535
S S I G Y G+ A + M+ E
Sbjct: 681 VYSWTSMITG----YAQHGRGKEALELFYQMQQE 710
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 167/568 (29%), Positives = 289/568 (50%), Gaps = 22/568 (3%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K GQ +A++ + + TY +LLQ CI K I+ HI +G + ++
Sbjct: 87 KAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIF 146
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ +I YAK G+ +SA++ FD M E++V SW ++ GY Q+G E A + M++
Sbjct: 147 MWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDS 206
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
V+ ++ T+ S L ACA R + GR + I K + +LFV +AL++++ KCG I DA
Sbjct: 207 VKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDAT 266
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+F+ + +D+V+W +MI GLA G + LF+ M +G++PD S+LRA
Sbjct: 267 KVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPE 326
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
L + ++H + ++G ++ + +++ +Y K GS+ A +++ + +++S TA+I+
Sbjct: 327 ALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIA 386
Query: 307 GFARDDNHSK--EAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
GFA+ H + EAF F MI + + V +L C++ ++L G+QI +
Sbjct: 387 GFAQ---HGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAG 443
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
D V AL+ MYAK G + DA+R F+++ +NV++W ++I Y +H A+ ++
Sbjct: 444 YGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQ 503
Query: 425 KMKHEGMVPNDVTFLSLLFAC-SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFAR 483
+ EG+ PN TF S+L C S L W F +I K + + +V +F
Sbjct: 504 ALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHF--LIMKAGLESDLHVSNALVSMFVN 561
Query: 484 RGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDM------EPEKS 537
G L SA N+ M + S W+ I+ +G + A + F M +P+K
Sbjct: 562 CGDLMSAKNLFNDMPKRDLVS-WNTIIAGFVQHGKNQV----AFDYFKMMQESGIKPDK- 615
Query: 538 VNYVVLSNIYTAAGAWDNARKTRKLMEE 565
+ + L N + A R+ L+ E
Sbjct: 616 ITFTGLLNACASPEALTEGRRLHALITE 643
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 225/413 (54%), Gaps = 5/413 (1%)
Query: 101 AMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKG 160
A+++ ++ G A+ V + S ++ + TYS+ L+ C + + L G I I+K
Sbjct: 80 AVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKS 139
Query: 161 RFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLF 220
++F+ + L+++YAKCG A +F+ + KDV SWN ++GG G +++F L
Sbjct: 140 GVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLH 199
Query: 221 RSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKY 280
M++ +KPD T S+L A + K ++++LI+K G ++ + +LI+++ K
Sbjct: 200 EQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKC 259
Query: 281 GSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLM 340
G I A +++ ++ D+++ T++I+G AR K+A +LF+ M + + D V +
Sbjct: 260 GDIGDATKVFDNLPTRDLVTWTSMITGLAR-HGRFKQACNLFQRMEEEGVQPDKVAFVSL 318
Query: 341 LNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNV 400
L C + +L G+++HA + + VG A++ MY K G + DA FD + +NV
Sbjct: 319 LRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNV 378
Query: 401 ISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTD 460
+SWT++IAG+A+HG EA + KM G+ PN VTF+S+L ACS G ++
Sbjct: 379 VSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDH 438
Query: 461 MINK-YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
+I Y R + ++ ++A+ G L+ A+ + +++ K W+A++ A
Sbjct: 439 IIEAGYGSDDRVR--TALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMITA 488
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/549 (38%), Positives = 333/549 (60%), Gaps = 5/549 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFD-- 89
T S+L+ C + +IH ++ NG+E N+ + T ++ YAK V A F
Sbjct: 164 TLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGL 223
Query: 90 RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG 149
+N V WTAM++GYAQNG A+ F M GV NQ+T+ + L AC+ +
Sbjct: 224 EFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCF 283
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
G + G I K F N++V+SAL+D+YAKCG +++A + E +E DVVSWN+++ G
Sbjct: 284 GEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVR 343
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
G +++ LF++M + MK D +T S+L V G + +H LIIK G E+ +
Sbjct: 344 HGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGS--INPKSVHGLIIKTGFENYKLV 401
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+ +L+D+YAK G + AY ++ ML+ D+IS T+L++G+A++++H +E+ +F DM +
Sbjct: 402 SNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSH-EESLKIFCDMRVTG 460
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ D I+ +L+ CA + L G+Q+H K + +V N+L+ MYAK G + DA+
Sbjct: 461 VNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDAD 520
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
F M K+VI+WT++I GYA++G G +++ Y M G P+ +TF+ LLFACSH G
Sbjct: 521 AIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAG 580
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
L EG + F M Y I P EH++C++DLF R G+L+ A ++ QM++KP A++W ++
Sbjct: 581 LVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSL 640
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
L AC ++ N L E AA NLF++EP ++ YV+LSN+Y+A+ W++ K RKLM+ + +
Sbjct: 641 LSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIV 700
Query: 570 KNPGYSFLQ 578
K PG S+L+
Sbjct: 701 KEPGCSWLE 709
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 157/495 (31%), Positives = 254/495 (51%), Gaps = 38/495 (7%)
Query: 49 AHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAM------ 102
A L H T +++ + +++ +K G V ARK FD+MP+++ SW M
Sbjct: 49 AFLRSIHTTTAASYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVN 108
Query: 103 -------------------------ISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSA 137
ISGY + G A +F +M G +A+QFT S
Sbjct: 109 VGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSV 168
Query: 138 LRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE--RK 195
LR C+ + +Q G MI G + K F N+FV + L+D+YAKC + +A LF+ +E RK
Sbjct: 169 LRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRK 228
Query: 196 DVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIH 255
+ V W AM+ G A G + FR M QG++ + +T +IL A + Q+H
Sbjct: 229 NHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVH 288
Query: 256 DLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHS 315
I+K G S+ + +L+D+YAK G +++A + +M D++S +L+ GF R
Sbjct: 289 GFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVR-HGLE 347
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNAL 375
+EA LFK+M + M IDD +LN C V S+N + +H K V NAL
Sbjct: 348 EEALRLFKNMHGRNMKIDDYTFPSVLNCCV-VGSIN-PKSVHGLIIKTGFENYKLVSNAL 405
Query: 376 IDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND 435
+DMYAK+G++ A F++M +K+VISWTSL+ GYA++ E+++++ M+ G+ P+
Sbjct: 406 VDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQ 465
Query: 436 VTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIR 495
S+L AC+ L G ++ D I K + ++ +V ++A+ G L+ A +
Sbjct: 466 FIVASILSACAELTLLEFGKQVHLDFI-KSGLRWSQSVYNSLVAMYAKCGCLDDADAIFV 524
Query: 496 QMNIKPTASLWSAIL 510
M +K + W+AI+
Sbjct: 525 SMQVKDVIT-WTAII 538
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 193/386 (50%), Gaps = 47/386 (12%)
Query: 164 ENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG------------------ 205
E+++ + LL+ +K G + DA LF+++ +KD SWN MI
Sbjct: 63 ESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGC 122
Query: 206 -------------GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMK 250
G G ++F LFRSM +G K FTLGS+LR +S+G I+ +
Sbjct: 123 SCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGE 182
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML--KTDIISCTALISGF 308
+ IH ++K G E + + L+D+YAK + A L++ + + + + TA+++G+
Sbjct: 183 M--IHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGY 240
Query: 309 ARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYD 368
A++ + K A + F+ M + + + +L C++V + G Q+H F K +
Sbjct: 241 AQNGDGYK-AVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSN 299
Query: 369 AAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKH 428
V +AL+DMYAK G++ +A + M D +V+SW SL+ G+ +HG EA+ L+K M
Sbjct: 300 VYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHG 359
Query: 429 EGMVPNDVTFLSLLFAC---SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRG 485
M +D TF S+L C S + G + T N Y+++ A +VD++A+ G
Sbjct: 360 RNMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKTGFEN-YKLVSNA-----LVDMYAKTG 413
Query: 486 QLESAYNMIRQMNIKPTASLWSAILG 511
++ AY + +M K S S + G
Sbjct: 414 DMDCAYTVFEKMLEKDVISWTSLVTG 439
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 88/208 (42%), Gaps = 40/208 (19%)
Query: 336 ILCLMLNICANVASLNLGRQIHAF-AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE 394
+L N C +A L R IH A Y+S Y N L++ +KSG++ DA + FD+
Sbjct: 37 VLSFPHNPCKFMAFL---RSIHTTTAASYESIYQT---NQLLNQLSKSGQVNDARKLFDK 90
Query: 395 MGDKNVISWTSLIA-------------------------------GYAKHGYGHEAIELY 423
M K+ SW ++I+ GY K G EA +L+
Sbjct: 91 MPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLF 150
Query: 424 KKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFAR 483
+ M+ EG + T S+L CS GL G E+ + K + +VD++A+
Sbjct: 151 RSMRLEGWKASQFTLGSVLRVCSSLGLIQTG-EMIHGFVVKNGFEGNVFVVTGLVDMYAK 209
Query: 484 RGQLESAYNMIRQMNI-KPTASLWSAIL 510
+ A + + + + LW+A++
Sbjct: 210 CKCVSEAEFLFKGLEFDRKNHVLWTAMV 237
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/571 (38%), Positives = 329/571 (57%), Gaps = 8/571 (1%)
Query: 12 QLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLST 69
Q KQA + + P ++SLL+ C +A Q +HA + G ++ +++ T
Sbjct: 286 QFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGT 345
Query: 70 KVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA 129
++ Y K G + A + F+ + RNVVSWTAMI+G+AQ+G E A L F+ M+ SG+
Sbjct: 346 ALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEP 405
Query: 130 NQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILF 189
N+ T+ S L AC+R L+ GR I I K ++ + V++ALL +YAKCG + DA +F
Sbjct: 406 NRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVF 465
Query: 190 ERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA--SVGGIE 247
ERI +++VV+WNAMI D++ F++++++G+KPD T SIL S +E
Sbjct: 466 ERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALE 525
Query: 248 LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG 307
L K Q LII+ G ES + +L+ ++ G + SA L+ M + D++S +I+G
Sbjct: 526 LGKWVQ--SLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAG 583
Query: 308 FARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSY 367
F + ++ AFD FK M + D + +LN CA+ +L GR++HA +
Sbjct: 584 FVQ-HGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDC 642
Query: 368 DAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMK 427
D VG LI MY K G I DA+ F + KNV SWTS+I GYA+HG G EA+EL+ +M+
Sbjct: 643 DVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQ 702
Query: 428 HEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQL 487
EG+ P+ +TF+ L AC+H GL EG F M + I PR EH+ C+VDLF R G L
Sbjct: 703 QEGVKPDWITFVGALSACAHAGLIKEGLHHFESM-KDFNIEPRMEHYGCMVDLFGRAGLL 761
Query: 488 ESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIY 547
A I +M +KP + LW A+LGAC ++ + L E A+ +++P YV+LSNIY
Sbjct: 762 HEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIY 821
Query: 548 TAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
AAG W K RK+M +R + K PG S+++
Sbjct: 822 AAAGMWKEVTKMRKVMLDRGVVKKPGQSWIE 852
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 165/568 (29%), Positives = 281/568 (49%), Gaps = 16/568 (2%)
Query: 9 KTGQLKQALK--FSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K GQL +A+ S+ P + TY SLLQ CI K IH HI + + ++
Sbjct: 81 KAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIF 140
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ +I YAK G+ SA++ FD MP+++V SW ++ GY Q+ E A + M++ G
Sbjct: 141 MWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDG 200
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
V+ +++T+ L ACA + + G + I + +LFV +AL++++ KCG ++DA
Sbjct: 201 VKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDAL 260
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+F + R+D+++W +MI GLA + LF+ M +G++PD S+L+A
Sbjct: 261 KVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPE 320
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
L + ++H + ++GL++ + +L+ +Y K GS+ A +++ + +++S TA+I+
Sbjct: 321 ALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIA 380
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
GFA+ +EAF F MI + + V +L C+ ++L GRQIH K
Sbjct: 381 GFAQ-HGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYI 439
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
D V AL+ MYAK G + DA F+ + +NV++W ++I Y +H A+ ++ +
Sbjct: 440 TDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQAL 499
Query: 427 KHEGMVPNDVTFLSLLFAC-SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRG 485
EG+ P+ TF S+L C S L W +I + + +V +F G
Sbjct: 500 LKEGIKPDSSTFTSILNVCKSPDALELGKW--VQSLIIRAGFESDLHIRNALVSMFVNCG 557
Query: 486 QLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSV-----NY 540
L SA N+ M + S W+ I+ +G A + F M E V +
Sbjct: 558 DLMSAMNLFNDMPERDLVS-WNTIIAGFVQHGENQF----AFDYFKMMQESGVKPDQITF 612
Query: 541 VVLSNIYTAAGAWDNARKTRKLMEERSL 568
L N + A R+ L+ E +L
Sbjct: 613 TGLLNACASPEALTEGRRLHALITEAAL 640
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 150/558 (26%), Positives = 284/558 (50%), Gaps = 37/558 (6%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T++ +L C D K + + + I+ G++++L + T +I + K G V A K F
Sbjct: 204 DKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVF 263
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ +P R++++WT+MI+G A++ + A +F M GV+ ++ + S L+AC L+
Sbjct: 264 NNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALE 323
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ + +++ ++V +ALL +Y KCG +EDA +F ++ ++VVSW AMI G A
Sbjct: 324 QGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFA 383
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G +++F F M+ G++P+ T SIL A L + QIHD IIK G + ++
Sbjct: 384 QHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDR 443
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +L+ +YAK GS+ A ++ + K ++++ A+I+ + + + + A F+ ++ +
Sbjct: 444 VRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDN-AVATFQALLKE 502
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ D +LN+C + +L LG+ + + + D + NAL+ M+ G++ A
Sbjct: 503 GIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSA 562
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
F++M +++++SW ++IAG+ +HG A + +K M+ G+ P+ +TF LL AC+
Sbjct: 563 MNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASP 622
Query: 449 GLTCEGWELF---------------TDMINKY-------------RILPRAEHFS--CVV 478
EG L T +I+ Y LP+ +S ++
Sbjct: 623 EALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMI 682
Query: 479 DLFARRGQLESAYNMIRQMN---IKPTASLWSAILGACSIYG--NTSLGELAARNLFDME 533
+A+ G+ + A + QM +KP + L AC+ G L + F++E
Sbjct: 683 TGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESMKDFNIE 742
Query: 534 PEKSVNYVVLSNIYTAAG 551
P +Y + +++ AG
Sbjct: 743 PRME-HYGCMVDLFGRAG 759
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 225/419 (53%), Gaps = 3/419 (0%)
Query: 94 RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMI 153
+N A ++ ++ G A+LV ++ ++ ++ TYSS L+ C + + L G I
Sbjct: 67 KNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERI 126
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN 213
I+ + ++F+ + L+ +YAKCG A +F+ + KDV SWN ++GG
Sbjct: 127 HNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRY 186
Query: 214 DDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSL 273
+++F L M++ G+KPD +T +L A + K ++ LI+ G ++ + +L
Sbjct: 187 EEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTAL 246
Query: 274 IDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGID 333
I+++ K G + A +++ ++ + D+I+ T++I+G AR K+A +LF+ M + + D
Sbjct: 247 INMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLAR-HRQFKQACNLFQVMEEEGVQPD 305
Query: 334 DVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFD 393
V +L C + +L G+++HA + + VG AL+ MY K G + DA F+
Sbjct: 306 KVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFN 365
Query: 394 EMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCE 453
+ +NV+SWT++IAG+A+HG EA + KM G+ PN VTF+S+L ACS +
Sbjct: 366 LVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQ 425
Query: 454 GWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
G ++ D I K + + ++ ++A+ G L A N+ +++ K W+A++ A
Sbjct: 426 GRQIH-DRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERIS-KQNVVAWNAMITA 482
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/552 (38%), Positives = 325/552 (58%), Gaps = 5/552 (0%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
S + SLL + K+ Q IHA ++ +G + L TK + +G++ ARK FD
Sbjct: 72 SFFSSLLDHSVHKRHLNQ---IHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDE 128
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
PE +V W A+I GY+ + + +A+ ++S M SGV + FT L+AC+ + L+ G
Sbjct: 129 FPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVG 188
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ + G I + F ++FV++ L+ LYAKCG +E A I+FE ++ +++VSW +MI G
Sbjct: 189 KRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQN 248
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
G ++ +F M ++ +KPD L S+LRA +L + IH ++K+GLE L
Sbjct: 249 GLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLL 308
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
SL +YAK G + A + M +++ A+ISG+A+ + ++ EA LF++MI K +
Sbjct: 309 ISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAK-NGYTNEAVGLFQEMISKNI 367
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
D + + + CA V SL+L + + + K + D V ALIDM+AK G + A
Sbjct: 368 RTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLARE 427
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
FD DK+V+ W+++I GY HG G +AI+L+ MK G+ PNDVTF+ LL AC+H+GL
Sbjct: 428 VFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGL 487
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
EGWELF M Y I R +H++CVVDL R G L AY+ I M I+P S+W A+L
Sbjct: 488 VEEGWELFHSM-KYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALL 546
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
GAC IY + +LGE AA LF ++P + +YV LSN+Y ++ WD+ K R LM E+ L K
Sbjct: 547 GACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSK 606
Query: 571 NPGYSFLQSSKK 582
+ GYS ++ + K
Sbjct: 607 DLGYSLIEINGK 618
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 195/389 (50%), Gaps = 18/389 (4%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T +L+ C +H I G+ES++ + ++ YAK G V AR F
Sbjct: 168 DGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVF 227
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ + +RN+VSWT+MISGY QNG AL +F M + V+ + S LRA + L+
Sbjct: 228 EGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLE 287
Query: 149 GGRMIQGSIQKG--RFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
G+ I G + K F +L + +L +YAKCG + A F+++E +V+ WNAMI G
Sbjct: 288 QGKSIHGCVVKMGLEFEPDLLI--SLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISG 345
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLE 264
A G+ +++ LF+ M+ + ++ D T+ S + A VG ++L K + D I K
Sbjct: 346 YAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAK--WMGDYINKTEYR 403
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ + +LID++AK GS+ A +++ L D++ +A+I G+ ++A DLF
Sbjct: 404 NDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGL-HGRGQDAIDLFYA 462
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQI-HA---FAFKYQSSYDAAVGNALIDMYA 380
M + +DV +L C + + G ++ H+ + + + + A V +D+
Sbjct: 463 MKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGIEARHQHYACV----VDLLG 518
Query: 381 KSGEIADANRAFDEMG-DKNVISWTSLIA 408
+SG + +A M + V W +L+
Sbjct: 519 RSGHLNEAYDFITTMPIEPGVSVWGALLG 547
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/621 (35%), Positives = 338/621 (54%), Gaps = 51/621 (8%)
Query: 11 GQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTK 70
G L++A++ P L+ TY S+LQ C D K+ + IH+ I +N E + L +K
Sbjct: 82 GNLRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSK 141
Query: 71 VIIFYAKVGD-------------------------------------------------V 81
++ Y GD V
Sbjct: 142 LVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRV 201
Query: 82 LSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC 141
SARK FD + +R+V+SW +MISGY NG E L +F ML G+ + T S + C
Sbjct: 202 ESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGC 261
Query: 142 ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN 201
+ L GR + G K F + L + + LLD+Y+K G + A +FE + + VVSW
Sbjct: 262 SNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWT 321
Query: 202 AMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKL 261
+MI G A +G +D S LF M ++G+ PD FT+ +IL A L +H+ I +
Sbjct: 322 SMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKEN 381
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDL 321
++S ++ +L+D+YAK GS+ A+ ++ M DI+S +I G++++ + EA +L
Sbjct: 382 KMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKN-SLPNEALNL 440
Query: 322 FKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
F +M + + + +L CA++A+L G++IH + S D V NAL+DMY K
Sbjct: 441 FVEMQYNSKP-NSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLK 499
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
G + A FD + +K+++SWT +IAGY HGYG EAI + +M++ G+ P++V+F+S+
Sbjct: 500 CGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISI 559
Query: 442 LFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
L+ACSH+GL EGW F M N I P++EH++C+VDL AR G L AY I+ M I+P
Sbjct: 560 LYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEP 619
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRK 561
A++W A+L C IY + L E A ++F++EPE + YV+L+NIY A W+ +K R+
Sbjct: 620 DATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRE 679
Query: 562 LMEERSLRKNPGYSFLQSSKK 582
+ R LRKNPG S+++ K
Sbjct: 680 RIGRRGLRKNPGCSWIEIKGK 700
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/575 (35%), Positives = 334/575 (58%), Gaps = 3/575 (0%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K G+ A+K + P+ T+ S+L C + + +H +I+ G+ +
Sbjct: 50 KCGEPNSAVKVFEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPL 109
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
++ ++ Y+K G + A K F+ MP+ NVV+W MI+G+ QNG+ + A L+FS M+ +G
Sbjct: 110 VANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAG 169
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
V + T++S L + L+ G+ I G I + ++F+KSAL+D+Y KC + A
Sbjct: 170 VSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMAC 229
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+F++ D+V A+I G + G N+D+ +FR ++ + M P+ TL S+L A G
Sbjct: 230 KIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLA 289
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
L ++H I+K GL+ + +++D+YAK G + AYQ++R M + D + A+I+
Sbjct: 290 TLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIIT 349
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
+++ +EA DLF+ M + + D V + L+ CAN+ +L+ G+ IH+F K
Sbjct: 350 NCSQN-GKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFD 408
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
+ +ALIDMY K G ++ A FD M +KN +SW S+IA Y HG+ ++ L+ KM
Sbjct: 409 SEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKM 468
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
+G+ P+ VTFL++L AC H G +G + F M +Y I R EH++C+VDLF R G+
Sbjct: 469 LEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGR 528
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
L A+ I+ M P +W +LGAC ++GN L E+A+R L D++PE S YV+LSN+
Sbjct: 529 LNEAFETIKNMPFSPDDGVWGTLLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNV 588
Query: 547 YTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSK 581
+ AG W + RK R LM++R ++K PGYS+++ +K
Sbjct: 589 HADAGQWGSVRKIRSLMKKRGVQKVPGYSWIEVNK 623
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 147/508 (28%), Positives = 260/508 (51%), Gaps = 4/508 (0%)
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G+ + + + +I YA+ G + AR+ FD+MP ++ V W M++G+ + G +A+ VF
Sbjct: 2 GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
M + N T++S L CA + G + G + F + V +AL+ +Y+K
Sbjct: 62 EDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKF 121
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G + DA LF + +VV+WN MI G GF D++ LF M+ G+ PD T S L
Sbjct: 122 GQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFL 181
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
+ L + +IH I++ G+ L +LID+Y K + A ++++ DI+
Sbjct: 182 PSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIV 241
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
CTA+ISG+ + + +A ++F+ ++ +KM + V L +L CA +A+LNLG+++HA
Sbjct: 242 VCTAIISGYVL-NGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHAN 300
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
K+ VG+A++DMYAK G + A + F M +K+ + W ++I +++G EA
Sbjct: 301 ILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEA 360
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD 479
I+L+++M EG+ + V+ + L AC++ G + + MI K S ++D
Sbjct: 361 IDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMI-KGAFDSEVFAESALID 419
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLG-ELAARNLFDMEPEKSV 538
++ + G L A + M K S W++I+ A +G+ + L + L D V
Sbjct: 420 MYGKCGNLSVARCVFDMMREKNEVS-WNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHV 478
Query: 539 NYVVLSNIYTAAGAWDNARKTRKLMEER 566
++ + + AG D + + M E
Sbjct: 479 TFLTILSACGHAGQVDKGIQYFRCMTEE 506
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 104/197 (52%), Gaps = 1/197 (0%)
Query: 261 LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFD 320
+G + SLI +YA+ G I A +L+ M D + +++GF + A
Sbjct: 1 MGFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVK-CGEPNSAVK 59
Query: 321 LFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYA 380
+F+DM + + + +L+ICA+ A G Q+H +D V NAL+ MY+
Sbjct: 60 VFEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYS 119
Query: 381 KSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
K G+++DA + F+ M D NV++W +IAG+ ++G+ EA L+ +M G+ P+ +TF S
Sbjct: 120 KFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFAS 179
Query: 441 LLFACSHTGLTCEGWEL 457
L + + + +G E+
Sbjct: 180 FLPSVTESASLKQGKEI 196
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/552 (37%), Positives = 319/552 (57%), Gaps = 5/552 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T++S+L C A +H ++ G +N + +I YAK G V AR+ F
Sbjct: 144 DKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVF 203
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D M R+ VSWT + YA++GY + +L + AML+ GVR ++ TY + L AC + L+
Sbjct: 204 DAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALE 263
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ I I + ++ V +AL +Y KCG ++DA +FE + +DV++WN MIGGL
Sbjct: 264 KGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLV 323
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV--GGIELMKISQIHDLIIKLGLESS 266
G +++ +F M+++ + PD T +IL A GG+ K +IH +K GL S
Sbjct: 324 DSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGK--EIHARAVKDGLVSD 381
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ +LI++Y+K GS++ A Q++ M K D++S TAL+ G+A D E+F FK M+
Sbjct: 382 VRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYA-DCGQVVESFSTFKKML 440
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ + + + +L C+N +L G++IHA K D AV NAL+ MY K G +
Sbjct: 441 QQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVE 500
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
DA R + M ++V++W +LI G A++G G EA++ ++ MK E M PN TF++++ AC
Sbjct: 501 DAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACR 560
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
L EG F M Y I+P +H++C+VD+ AR G L A ++I M KP+A++W
Sbjct: 561 VRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMW 620
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
A+L AC +GN +GE AA +EP+ + YV LS IY AAG W + K RKLM+ER
Sbjct: 621 GALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKER 680
Query: 567 SLRKNPGYSFLQ 578
++K PG S+++
Sbjct: 681 GVKKEPGRSWIE 692
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 162/553 (29%), Positives = 282/553 (50%), Gaps = 21/553 (3%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D Y+ LLQ C+ K +H HI+ G + N+++ ++ Y G V AR+
Sbjct: 42 VDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRL 101
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD+ ++VVSW MISGYA G + A +F+ M + G+ ++FT+ S L AC+ L
Sbjct: 102 FDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAAL 161
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
GR + + + N V +AL+ +YAKCG + DA +F+ + +D VSW + G
Sbjct: 162 NWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAY 221
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A G+ +S + +M+++G++P T ++L A L K QIH I++ S
Sbjct: 222 AESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDV 281
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+++ +L +Y K G+++ A +++ + D+I+ +I G D +EA +F M+
Sbjct: 282 RVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLV-DSGQLEEAHGMFHRMLK 340
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ + D V +L+ CA L G++IHA A K D GNALI+MY+K+G + D
Sbjct: 341 ECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKD 400
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A + FD M ++V+SWT+L+ GYA G E+ +KKM +G+ N +T++ +L ACS+
Sbjct: 401 ARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSN 460
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
G E+ +++ K I + ++ ++ + G +E A + M+ + + W+
Sbjct: 461 PVALKWGKEIHAEVV-KAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVT-WN 518
Query: 508 AILGACSIYGN--TSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
++G + G +L + +M P N N+ +A + R L+EE
Sbjct: 519 TLIGGLAQNGRGLEALQKFEVMKSEEMRP----NATTFVNVMSAC-------RVRNLVEE 567
Query: 566 -----RSLRKNPG 573
S+RK+ G
Sbjct: 568 GRRQFASMRKDYG 580
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 211/395 (53%), Gaps = 3/395 (0%)
Query: 118 VFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYA 177
V + + G + + + Y L++C + + L G+ + I + N+++ + LL LY
Sbjct: 31 VLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYV 90
Query: 178 KCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGS 237
CG + +A LF++ K VVSWN MI G A +G ++F LF M ++G++PD FT S
Sbjct: 91 HCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVS 150
Query: 238 ILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
IL A L ++H +++ GL ++ + +LI +YAK GS+R A +++ +M D
Sbjct: 151 ILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRD 210
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
+S T L +A + +++E+ + M+ + + + +L+ C ++A+L G+QIH
Sbjct: 211 EVSWTTLTGAYA-ESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIH 269
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
A + + D V AL MY K G + DA F+ + +++VI+W ++I G G
Sbjct: 270 AQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLE 329
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
EA ++ +M E + P+ VT+L++L AC+ G G E+ + K ++ + +
Sbjct: 330 EAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAV-KDGLVSDVRFGNAL 388
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
++++++ G ++ A + +M + S W+A++G
Sbjct: 389 INMYSKAGSMKDARQVFDRMPKRDVVS-WTALVGG 422
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 115/245 (46%), Gaps = 8/245 (3%)
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMY 379
D+ + + K +D +L C L +G+Q+H ++ + + N L+ +Y
Sbjct: 30 DVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLY 89
Query: 380 AKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFL 439
G + +A R FD+ +K+V+SW +I+GYA G G EA L+ M+ EG+ P+ TF+
Sbjct: 90 VHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFV 149
Query: 440 SLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
S+L ACS G E+ ++ + + A + ++ ++A+ G + A + M
Sbjct: 150 SILSACSSPAALNWGREVHVRVM-EAGLANNATVGNALISMYAKCGSVRDARRVFDAMAS 208
Query: 500 KPTASLWSAILGAC--SIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNAR 557
+ S W+ + GA S Y SL A + P + + N+ +A G+
Sbjct: 209 RDEVS-WTTLTGAYAESGYAQESLKTYHAMLQEGVRPSR----ITYMNVLSACGSLAALE 263
Query: 558 KTRKL 562
K +++
Sbjct: 264 KGKQI 268
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/561 (36%), Positives = 329/561 (58%), Gaps = 4/561 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ S+L+ + +H I G+ S + +I FY V A+K FD +
Sbjct: 253 TFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDEL 312
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
+R+V+SW +MISGY +NG D+ + +F ML GV + T + ACA + L G+
Sbjct: 313 TDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGK 372
Query: 152 MIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
++ SI+ + + LLD+Y+KCG + A +FER++ K VVSW +MI G +
Sbjct: 373 VLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVRE 432
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
G +D + LF M +G+ PD + + SIL A L +HD I + LE+++ ++
Sbjct: 433 GLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVS 492
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
+L D+YAK GS++ A+ ++ M K D+IS +I G+ ++ + EA LF +M ++
Sbjct: 493 NALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKN-SLPNEALTLFAEM-QRES 550
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
D + +L CA++A+L+ GR+IH +A + S D V NA++DMY K G + A
Sbjct: 551 KPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARS 610
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
FD + +K+++SWT +IAGY HGYG EAI + +M+ G+ P++V+F+S+L+ACSH+GL
Sbjct: 611 LFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGL 670
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
EGW++F M + +I P EH++C+VDL AR G L A+ I+ M IKP A++W A+L
Sbjct: 671 LDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALL 730
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
C I+ + L E A +F++EPE + YV+L+NIY A W+ +K RK + +R L+K
Sbjct: 731 CGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKK 790
Query: 571 NPGYSFLQ-SSKKNILLLEPC 590
NPG S+++ K NI + C
Sbjct: 791 NPGCSWIEIKGKINIFVAGDC 811
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 157/563 (27%), Positives = 286/563 (50%), Gaps = 14/563 (2%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLS 68
+ G LK A++ S ++ D Y S+LQ C ++K+ R + + I ++G + L
Sbjct: 129 EVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILG 188
Query: 69 TKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR 128
K++ Y K GD+ R FD++ E + W MIS Y+ +G ++ +F ML G++
Sbjct: 189 VKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIK 248
Query: 129 ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWIL 188
N +T+SS L+ A + ++ GR + G I K F V ++L+ Y + A L
Sbjct: 249 PNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKL 308
Query: 189 FERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGI 246
F+ + +DV+SWN+MI G G +D +F M+ G+ D T+ ++ A++G +
Sbjct: 309 FDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTL 368
Query: 247 ELMKISQIHDLIIKLG-LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALI 305
L K+ +H IK L+ + +L+D+Y+K G + SA +++ M + ++S T++I
Sbjct: 369 LLGKV--LHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMI 426
Query: 306 SGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS 365
+G+ R + S A LF +M + + D + +LN CA +L G+ +H + +
Sbjct: 427 TGYVR-EGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNL 485
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKK 425
++ V NAL DMYAK G + DA+ F M K+VISW ++I GY K+ +EA+ L+ +
Sbjct: 486 ETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAE 545
Query: 426 MKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI-NKYRILPRAEHFSCVVDLFARR 484
M+ E P+ T +L AC+ +G E+ + N Y + VVD++ +
Sbjct: 546 MQRESK-PDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTN--AVVDMYVKC 602
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSI--YGNTSLGELAARNLFDMEPEKSVNYVV 542
G L A ++ + K S W+ ++ + YG+ ++ + +EP++ V+++
Sbjct: 603 GLLVLARSLFDMIPNKDLVS-WTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDE-VSFIS 660
Query: 543 LSNIYTAAGAWDNARKTRKLMEE 565
+ + +G D K +M++
Sbjct: 661 ILYACSHSGLLDEGWKIFNIMKK 683
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/549 (37%), Positives = 322/549 (58%), Gaps = 3/549 (0%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
LL+ C Q +HA + G+ +L ++ +I Y K V A FDRM ERN
Sbjct: 10 LLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERN 69
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG 155
VVSWTA++ GY Q G + +L + M SGV+ N+FT+S++L+AC + ++ G I G
Sbjct: 70 VVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHG 129
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD 215
K F V +A +D+Y+KCG I A +F ++ +++VSWNAMI G +G
Sbjct: 130 MCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRK 189
Query: 216 SFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS--NKLTGSL 273
S LF+ M QG PD FT S L+A + +QIH +I G S N + ++
Sbjct: 190 SLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAI 249
Query: 274 IDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGID 333
+D+YAK G + A +++ + + ++IS +ALI GFA++ N EA DLF+ + +D
Sbjct: 250 VDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGN-LLEAMDLFRQLRESVSNVD 308
Query: 334 DVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFD 393
+L +M+ + A++A + G+Q+H + K S D +V N++IDMY K G +A R F
Sbjct: 309 GFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFS 368
Query: 394 EMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCE 453
EM +NV+SWT +I GY KHG G +AI L+ +M+ +G+ ++V +L+LL ACSH+GL E
Sbjct: 369 EMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRE 428
Query: 454 GWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGAC 513
E F+ + N +++ P EH++C+VD+ R GQL+ A N+I M +KP +W +L AC
Sbjct: 429 SQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSAC 488
Query: 514 SIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPG 573
++GN +G LF M+ + VNYV++SNIY AG W + RKL++ + L+K G
Sbjct: 489 RVHGNLEIGREVGEILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKAKGLKKEAG 548
Query: 574 YSFLQSSKK 582
S+++ +K+
Sbjct: 549 QSWVEINKE 557
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 175/366 (47%), Gaps = 39/366 (10%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH--LSTKVIIFYAKVGDVLSARK 86
D T+ S L+ C A R IHA +IT G+ ++ +++ ++ YAK G + A+K
Sbjct: 205 DEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQK 264
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FDR+ ++N++SW+A+I G+AQ G A+ +F + S + F S + A +
Sbjct: 265 VFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLAL 324
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
++ G+ + I K ++ V ++++D+Y KCG E+A LF ++ ++VVSW MI G
Sbjct: 325 VEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITG 384
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
G + + LF R + GIEL D + L L S+
Sbjct: 385 YGKHGLGEKAIHLFN------------------RMQLDGIEL-------DEVAYLALLSA 419
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+G + + + + + +Q+ ++ + +C I G A KEA +L ++M
Sbjct: 420 CSHSGLIRESQEYFSRLCNNHQMKPNI---EHYACMVDILGRA---GQLKEAKNLIENMK 473
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALI-DMYAKSGEI 385
LK ++ I +L+ C +L +GR++ F+ + D V ++ ++YA++G
Sbjct: 474 LKP---NEGIWQTLLSACRVHGNLEIGREVGEILFRMDT--DNPVNYVMMSNIYAEAGYW 528
Query: 386 ADANRA 391
+ R
Sbjct: 529 KECERV 534
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 91/182 (50%), Gaps = 2/182 (1%)
Query: 337 LCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG 396
L +L C+ + G Q+HA A +D + N LIDMY K + A FD M
Sbjct: 7 LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRML 66
Query: 397 DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWE 456
++NV+SWT+L+ GY + G ++ L +M + G+ PN+ TF + L AC G+ G +
Sbjct: 67 ERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQ 126
Query: 457 LFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIY 516
+ M K + + +D++++ G++ A + +M + S W+A++ +
Sbjct: 127 IH-GMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVS-WNAMIAGHTHE 184
Query: 517 GN 518
GN
Sbjct: 185 GN 186
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/578 (35%), Positives = 337/578 (58%), Gaps = 23/578 (3%)
Query: 7 NFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+F+T ++ + L+C +L D S IHA ++TNG NL
Sbjct: 22 DFRTNYHSRSFNYLLNCCSSLPDLSR-------------------IHALVVTNGCGQNLL 62
Query: 67 LSTKVIIFYAKVGDVLS-ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
LSTK+II + + ARK FD+MP+R+V W +I GYA G E AL ++S M +
Sbjct: 63 LSTKLIITACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGA 122
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
G+ + +T+ +R+CA + L+ G+ + +I K F ++FV+S+L+ +Y++ G
Sbjct: 123 GLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGM 182
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGG 245
++F + +++VSW A+I G + + +FR M+ G +P+ TL S+L A G
Sbjct: 183 ELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPA-CAG 241
Query: 246 IELMKISQ-IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
+E + + + IH IKLG++ LT +LI +Y K G++ +A L+ M+ +++S A+
Sbjct: 242 LEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAM 301
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
I+ + ++ N A LF+ M +K+ D + + +++ CA++ +LN GR +H +
Sbjct: 302 IAAYEQN-NAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKG 360
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
+ ++ NALIDMYAK G I A F+ + ++V+SWTS+I A HG+G +A++L+
Sbjct: 361 LEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFS 420
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
+MK EG+ PN TF ++ AC H+GL EG + F M+ Y I+P EH +C+VDL R
Sbjct: 421 RMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRA 480
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLS 544
G L AY I +M ++P S+W A+LG+C I+ N L EL A LF ++P+ YV++S
Sbjct: 481 GSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMS 540
Query: 545 NIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
NIY AG W++A + RKLMEER L+K PG+S ++ +++
Sbjct: 541 NIYAEAGRWEDAARLRKLMEERELKKIPGHSLVEVNRR 578
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/557 (36%), Positives = 325/557 (58%), Gaps = 6/557 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY S+L+ C ++H H+I +G+ ++ + + + YAK A K F
Sbjct: 297 DAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLF 356
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D MPER+V SW +IS Y Q+G E AL +F M SG + + T ++ + +CAR+ L+
Sbjct: 357 DEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLE 416
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ I + + F + FV SAL+D+Y KCG +E A +FE+I+RK+VVSWN+MI G +
Sbjct: 417 RGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYS 476
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
++G + LFR M +G++P TL SIL A + L IH II+ +E+
Sbjct: 477 LKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIF 536
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ SLID+Y K G+I SA ++++M KT+++S +ISG+ + ++ EA +F DM +
Sbjct: 537 VNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSY-LEALVIFTDM--R 593
Query: 329 KMGI--DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
K G+ D + +L C+ +A L G++IH F + + + V AL+DMYAK G +
Sbjct: 594 KAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVD 653
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
+A F+++ +++ +SWTS+IA Y HG EA++L++KM+ P+ VTFL++L ACS
Sbjct: 654 EALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACS 713
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI-RQMNIKPTASL 505
H GL EG F MI +Y P EH+SC++DL R G+L AY ++ R +I+ L
Sbjct: 714 HAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGL 773
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
S + AC ++ LGE R L + +P+ Y++LSN+Y + WD RK R ++E
Sbjct: 774 LSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKE 833
Query: 566 RSLRKNPGYSFLQSSKK 582
L+KNPG S+++ K+
Sbjct: 834 LGLKKNPGCSWIEVGKR 850
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 140/521 (26%), Positives = 262/521 (50%), Gaps = 20/521 (3%)
Query: 46 ERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER-NVVSWTAMIS 104
E LIH I++ G ++N+ L +I Y SA+ F + ++ W +++
Sbjct: 211 ELLGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMA 270
Query: 105 GYAQNGYDENALLVFSAMLR-SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFV 163
+N L VF +L ++ + FTY S L+AC+ + + G+M+ + K F
Sbjct: 271 ACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFA 330
Query: 164 ENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM 223
++ V S+ + +YAKC EDA LF+ + +DV SWN +I G + + LF M
Sbjct: 331 MDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEM 390
Query: 224 MRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
G KPD TL +++ + ++L + +IH +++ G ++ +L+D+Y K G +
Sbjct: 391 KVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCL 450
Query: 284 RSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCL--ML 341
A +++ + + +++S ++I+G++ + SK +LF+ M + GI + L +L
Sbjct: 451 EMAKEVFEQIQRKNVVSWNSMIAGYSLKGD-SKSCIELFRRM--DEEGIRPTLTTLSSIL 507
Query: 342 NICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVI 401
C+ +L LG+ IH + + + D V ++LID+Y K G I A F M NV+
Sbjct: 508 MACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVV 567
Query: 402 SWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM 461
SW +I+GY K G EA+ ++ M+ G+ P+ +TF S+L ACS + +G E+ +
Sbjct: 568 SWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIH-NF 626
Query: 462 INKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSL 521
I + ++ ++D++A+ G ++ A ++ Q+ + S W++++ A +G
Sbjct: 627 IIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVS-WTSMIAAYGSHGQA-- 683
Query: 522 GELAARNLF------DMEPEKSVNYVVLSNIYTAAGAWDNA 556
A LF D +P+K V ++ + + + AG D
Sbjct: 684 --FEALKLFEKMQQSDAKPDK-VTFLAILSACSHAGLVDEG 721
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/557 (36%), Positives = 325/557 (58%), Gaps = 6/557 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY S+L+ C ++H H+I +G+ ++ + + + YAK A K F
Sbjct: 105 DAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLF 164
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D MPER+V SW +IS Y Q+G E AL +F M SG + + T ++ + +CAR+ L+
Sbjct: 165 DEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLE 224
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ I + + F + FV SAL+D+Y KCG +E A +FE+I+RK+VVSWN+MI G +
Sbjct: 225 RGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYS 284
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
++G + LFR M +G++P TL SIL A + L IH II+ +E+
Sbjct: 285 LKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIF 344
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ SLID+Y K G+I SA ++++M KT+++S +ISG+ + ++ EA +F DM +
Sbjct: 345 VNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYL-EALVIFTDM--R 401
Query: 329 KMGI--DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
K G+ D + +L C+ +A L G++IH F + + + V AL+DMYAK G +
Sbjct: 402 KAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVD 461
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
+A F+++ +++ +SWTS+IA Y HG EA++L++KM+ P+ VTFL++L ACS
Sbjct: 462 EALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACS 521
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI-RQMNIKPTASL 505
H GL EG F MI +Y P EH+SC++DL R G+L AY ++ R +I+ L
Sbjct: 522 HAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGL 581
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
S + AC ++ LGE R L + +P+ Y++LSN+Y + WD RK R ++E
Sbjct: 582 LSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKE 641
Query: 566 RSLRKNPGYSFLQSSKK 582
L+KNPG S+++ K+
Sbjct: 642 LGLKKNPGCSWIEVGKR 658
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 146/537 (27%), Positives = 272/537 (50%), Gaps = 16/537 (2%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D + +SLL+ CID K +Q LIH I++ G ++N+ L +I Y SA+
Sbjct: 1 MDTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLV 60
Query: 88 FDRMPER-NVVSWTAMISGYAQNGYDENALLVFSAMLR-SGVRANQFTYSSALRACARMR 145
F + ++ W +++ +N L VF +L ++ + FTY S L+AC+ +
Sbjct: 61 FQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLG 120
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
+ G+M+ + K F ++ V S+ + +YAKC EDA LF+ + +DV SWN +I
Sbjct: 121 RVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVIS 180
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
G + + LF M G KPD TL +++ + ++L + +IH +++ G
Sbjct: 181 CYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFAL 240
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
++ +L+D+Y K G + A +++ + + +++S ++I+G++ + SK +LF+ M
Sbjct: 241 DGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGD-SKSCIELFRRM 299
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ + L +L C+ +L LG+ IH + + + D V ++LID+Y K G I
Sbjct: 300 DEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNI 359
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A F M NV+SW +I+GY K G EA+ ++ M+ G+ P+ +TF S+L AC
Sbjct: 360 GSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPAC 419
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
S + +G E+ +I ++ ++D++A+ G ++ A ++ Q+ + S
Sbjct: 420 SQLAVLEKGKEIHNFIIES-KLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVS- 477
Query: 506 WSAILGACSIYGNTSLGELAARNLF------DMEPEKSVNYVVLSNIYTAAGAWDNA 556
W++++ A +G A LF D +P+K V ++ + + + AG D
Sbjct: 478 WTSMIAAYGSHGQA----FEALKLFEKMQQSDAKPDK-VTFLAILSACSHAGLVDEG 529
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/571 (35%), Positives = 327/571 (57%), Gaps = 3/571 (0%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPST--YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K G AL ++ + P++ ++ LL C + R +H +I +G+ES+
Sbjct: 255 KNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPT 314
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
++ +I Y+K G++ ARK FD MP+ + V+W +I+GY QNG+ + A+ +F AM+ SG
Sbjct: 315 VANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSG 374
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
V+ + T++S L + + L+ + + I + ++++KSAL+D+Y K G +E A
Sbjct: 375 VKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMAC 434
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
F++ DV AMI G + G N ++ LFR ++++GM P+C T+ S+L A
Sbjct: 435 KTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALA 494
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
L ++H I+K GLE+ ++ S+ +YAK G + AYQ +R M D + +I
Sbjct: 495 SLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIV 554
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
F+++ + A DLF+ M D V L L+ CAN +L G+++H F +
Sbjct: 555 SFSQNGK-PELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFI 613
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
D V + LIDMY+K G++A A FD M KN +SW S+IA Y HG E ++L+ +M
Sbjct: 614 SDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEM 673
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
G+ P+ VTFL ++ AC H GL EG F M +Y I R EHF+C+VDL+ R G+
Sbjct: 674 VEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGR 733
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
L A++ I+ M P A W ++LGAC ++GN L +LA+++L +++P S YV+LSN+
Sbjct: 734 LHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHLVELDPNNSGYYVLLSNV 793
Query: 547 YTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
+ AG W++ K R LM+E+ ++K PGYS++
Sbjct: 794 HAGAGEWESVLKVRSLMKEKGVQKIPGYSWI 824
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 253/492 (51%), Gaps = 10/492 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ +++ C ++H + G+ +L + + +I Y G + A+ F
Sbjct: 176 DKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLF 235
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D +P R+ + W M++GY +NG +AL F M S V+ N ++ L CA ++
Sbjct: 236 DELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVR 295
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G + G + + F + V + ++ +Y+KCG + DA +F+ + + D V+WN +I G
Sbjct: 296 AGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYV 355
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
GF D++ LF++M+ G+K D T S L + + L ++H I++ G+
Sbjct: 356 QNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVY 415
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
L +L+D+Y K G + A + ++ D+ CTA+ISG+ + + EA +LF+ +I +
Sbjct: 416 LKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVL-NGLNVEALNLFRWLIQE 474
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
M + + + +L CA +ASL LG+++H K VG+++ MYAKSG + A
Sbjct: 475 GMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLA 534
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ F M K+ + W +I ++++G AI+L+++M G + V+ + L AC++
Sbjct: 535 YQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANY 594
Query: 449 GLTCEGWELFTDMINKYRILPRAEHF--SCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
G EL ++ I ++ F S ++D++++ G+L A ++ M+ K S W
Sbjct: 595 PALYYGKELHCFVVRNSFI---SDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVS-W 650
Query: 507 SAILGACSIYGN 518
++I+ A YGN
Sbjct: 651 NSIIAA---YGN 659
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 128/479 (26%), Positives = 243/479 (50%), Gaps = 5/479 (1%)
Query: 45 AERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMIS 104
++Q IHA ++ G +L L ++++ Y F R+ + W +I
Sbjct: 91 VKQQVRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIR 150
Query: 105 GYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVE 164
G++ G + AL+ F ML S V +++T+ ++AC + + +M+ + F
Sbjct: 151 GFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHM 210
Query: 165 NLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMM 224
+LF+ S+L+ LY G+I DA LF+ + +D + WN M+ G G + + F+ M
Sbjct: 211 DLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMR 270
Query: 225 RQGMKPDCFTLGSILR-ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
+KP+ + +L + GI I Q+H L+I+ G ES + ++I +Y+K G++
Sbjct: 271 NSCVKPNSVSFVCLLSVCATRGIVRAGI-QLHGLVIRSGFESDPTVANTIITMYSKCGNL 329
Query: 284 RSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNI 343
A +++ M +TD ++ LI+G+ + + + EA LFK M+ + +D + L
Sbjct: 330 FDARKIFDIMPQTDTVTWNGLIAGYVQ-NGFTDEAVALFKAMVTSGVKLDSITFASFLPS 388
Query: 344 CANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISW 403
SL +++H++ ++ +D + +AL+D+Y K G++ A + F + +V
Sbjct: 389 VLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVC 448
Query: 404 TSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMIN 463
T++I+GY +G EA+ L++ + EGMVPN +T S+L AC+ G EL D++
Sbjct: 449 TAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILK 508
Query: 464 KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLG 522
K + + S + ++A+ G+L+ AY R+M +K + W+ ++ + S G L
Sbjct: 509 K-GLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVC-WNLMIVSFSQNGKPELA 565
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/559 (34%), Positives = 322/559 (57%), Gaps = 32/559 (5%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H H++ N S++ L + ++ Y+K G V A + F + ERN VS+ A+++GY Q G
Sbjct: 399 LHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGK 458
Query: 112 DENALLVFSAML-RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
E AL ++ M G++ +QFT+++ L CA R GR I + + +N+ V++
Sbjct: 459 AEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVET 518
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
L+ +Y++CG + A +F R+ ++ SWN+MI G G ++ LF+ M G+KP
Sbjct: 519 ELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKP 578
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
DCF+L S+L + V + K ++H+ I++ +E L L+D+YAK GS+ A+++Y
Sbjct: 579 DCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVY 638
Query: 291 RSMLKTDIISCTALISGF-----ARDDNH-------------------------SKEAFD 320
+K D+I ++S F A D + KE+F+
Sbjct: 639 DQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFN 698
Query: 321 LFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ-SSYDAAVGNALIDMY 379
F +M+ + D + + ++N+C+++ +L G Q+H+ K + + AL+DMY
Sbjct: 699 HFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMY 758
Query: 380 AKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFL 439
+K G I A FD M KN++SW ++I+GY+KHG EA+ LY++M +GM PN+VTFL
Sbjct: 759 SKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFL 818
Query: 440 SLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
++L ACSHTGL EG +FT M Y I +AEH++C+VDL R G+LE A + +M I
Sbjct: 819 AILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPI 878
Query: 500 KPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKT 559
+P S W A+LGAC ++ + +G LAA+ LF+++P+ YV++SNIY AAG W
Sbjct: 879 EPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDI 938
Query: 560 RKLMEERSLRKNPGYSFLQ 578
R++M+ + ++K+PG S+++
Sbjct: 939 RQMMKMKGVKKDPGVSWIE 957
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 170/574 (29%), Positives = 295/574 (51%), Gaps = 39/574 (6%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVG---D 80
P + ++P Y SL+Q CID + ++ IH +I+NGY + +L TK+++ YA+ G D
Sbjct: 65 PASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDD 124
Query: 81 VLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRA 140
+ ARK F+ MPERN+ +W MI YA+ L ++ M SG +++FT+ S ++A
Sbjct: 125 LCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKA 184
Query: 141 CARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSW 200
C M + G R +Q S+ K NLFV AL+D YA+ GW++DA + IE VV+W
Sbjct: 185 CIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTW 244
Query: 201 NAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIK 260
NA+I G ++++ +F M++ G+ PD FT S LR Q+H +I
Sbjct: 245 NAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIA 304
Query: 261 LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFD 320
G + + +LID+YAK S +++ M + + ++ ++IS A+ H +A
Sbjct: 305 CGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQ-FGHFNDALV 363
Query: 321 LFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYA 380
LF M + L +L A +A + GR++H + + D +G+AL+DMY+
Sbjct: 364 LFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYS 423
Query: 381 KSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE-GMVPNDVTFL 439
K G + +A++ F + ++N +S+ +L+AGY + G EA+ELY M+ E G+ P+ TF
Sbjct: 424 KCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFT 483
Query: 440 SLLFACSHTGLTCEGWELF---------------TDMINKY--------------RILPR 470
+LL C++ +G ++ T++++ Y R+ R
Sbjct: 484 TLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAER 543
Query: 471 -AEHFSCVVDLFARRGQLESAYNMIRQMN---IKPTASLWSAILGACSIYGNTSLG-ELA 525
A ++ +++ + + G+ + A + +QM IKP S++L +C ++ G EL
Sbjct: 544 NAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELH 603
Query: 526 ARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKT 559
+ + E+ + VVL ++Y G+ D A K
Sbjct: 604 NFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKV 637
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 154/512 (30%), Positives = 274/512 (53%), Gaps = 10/512 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ S+++ CI + + + ++ G NL + ++ YA+ G + A +
Sbjct: 174 DKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSL 233
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D + +VV+W A+I+GY + E A +F ML+ GV + FT++SALR C +R
Sbjct: 234 DEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRD 293
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
GG+ + + F + FV +AL+D+YAKC E +F+ + ++ V+WN++I A
Sbjct: 294 GGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEA 353
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G +D+ LF M G K + F LGSIL AS G ++ K ++H +++ L S
Sbjct: 354 QFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDII 413
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
L +L+D+Y+K G + A+Q++RS+L+ + +S AL++G+ + + ++EA +L+ DM
Sbjct: 414 LGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQ-EGKAEEALELYHDM-QS 471
Query: 329 KMGI--DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ GI D +L +CAN + N GRQIHA + + + V L+ MY++ G +
Sbjct: 472 EDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLN 531
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A F+ M ++N SW S+I GY ++G EA+ L+K+M+ G+ P+ + S+L +C
Sbjct: 532 YAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCV 591
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
+ +G EL + I + + +VD++A+ G ++ A+ + Q IK L
Sbjct: 592 SLSDSQKGRELH-NFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQ-TIKKDVILN 649
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSV 538
+ ++ A G + A+NLFD +++
Sbjct: 650 NVMVSAFVNSGRAN----DAKNLFDQMEQRNT 677
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/536 (37%), Positives = 310/536 (57%), Gaps = 2/536 (0%)
Query: 47 RQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGY 106
++ +H +++ G+ SN + +I Y K G V SA FD + E +VVSW +MI+G
Sbjct: 212 KECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGC 271
Query: 107 AQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENL 166
NG+ N L +F ML GV + T S L ACA + L GR + G K F E +
Sbjct: 272 VVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEV 331
Query: 167 FVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ 226
+ LLD+Y+KCG + A +F ++ +VSW ++I +G D+ LF M +
Sbjct: 332 VFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSK 391
Query: 227 GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSA 286
G++PD +T+ SI+ A L K +H +IK G+ S+ +T +LI++YAK GS+ A
Sbjct: 392 GVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEA 451
Query: 287 YQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICAN 346
++ + DI+S +I G++++ EA +LF DM K+ DD+ + +L CA
Sbjct: 452 RLVFSKIPVKDIVSWNTMIGGYSQNL-LPNEALELFLDM-QKQFKPDDITMACVLPACAG 509
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
+A+L+ GR+IH + D V AL+DMYAK G + A FD + K++ISWT +
Sbjct: 510 LAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVM 569
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYR 466
IAGY HG+G+EAI + +M+ G+ P++ +F ++L ACSH+GL EGW+ F M N+
Sbjct: 570 IAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECG 629
Query: 467 ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAA 526
+ P+ EH++CVVDL AR G L AY I M IKP ++W +L C I+ + L E A
Sbjct: 630 VEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVA 689
Query: 527 RNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
++F++EP+ + YVVL+N+Y A W+ +K RK M++R ++NPG S+++ K
Sbjct: 690 EHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGK 745
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 169/601 (28%), Positives = 301/601 (50%), Gaps = 50/601 (8%)
Query: 11 GQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTK 70
G L+ A++ L ++Y S+LQ C +KK+ +H+ II+NG + L K
Sbjct: 75 GDLRNAIELLTKSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAK 134
Query: 71 VIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
++ Y GD++ RK FD++ V W ++S YA+ G ++ +F M + GV N
Sbjct: 135 LVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGN 194
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE 190
+T++ L+ A + ++ + + G + K F N V ++L+ Y K G +E A LF+
Sbjct: 195 CYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFD 254
Query: 191 RIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIEL 248
+ DVVSWN+MI G + GF+ + +F M+ G++ D TL S+L A++G + L
Sbjct: 255 ELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSL 314
Query: 249 MKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGF 308
+ +H +K + +L+D+Y+K G++ A +++ M T I+S T++I+ +
Sbjct: 315 GR--ALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAY 372
Query: 309 ARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYD 368
R+ +S +A LF +M K + D + +++ CA +SL+ GR +H++ K +
Sbjct: 373 VREGLYS-DAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSN 431
Query: 369 AAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKH 428
V NALI+MYAK G + +A F ++ K+++SW ++I GY+++ +EA+EL+ M+
Sbjct: 432 LPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQK 491
Query: 429 EGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSC-VVDLFARRGQL 487
+ P+D+T +L AC+ +G E+ ++ R H +C +VD++A+ G L
Sbjct: 492 Q-FKPDDITMACVLPACAGLAALDKGREIHGHILR--RGYFSDLHVACALVDMYAKCGLL 548
Query: 488 E----------------------------------SAYNMIRQMNIKPTASLWSAILGAC 513
S +N +R I+P S +SAIL AC
Sbjct: 549 VLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNAC 608
Query: 514 SIYGNTSLGEL---AARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
S G + G + RN +EP K +Y + ++ G N K K +E ++
Sbjct: 609 SHSGLLNEGWKFFNSMRNECGVEP-KLEHYACVVDLLARMG---NLSKAYKFIESMPIKP 664
Query: 571 N 571
+
Sbjct: 665 D 665
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 95/180 (52%), Gaps = 2/180 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T +L C A + IH HI+ GY S+LH++ ++ YAK G ++ A+ F
Sbjct: 496 DDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLF 555
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D +P+++++SWT MI+GY +G+ A+ F+ M +G+ ++ ++S+ L AC+ L
Sbjct: 556 DMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLN 615
Query: 149 GGRMIQGSIQKGRFVE-NLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGG 206
G S++ VE L + ++DL A+ G + A+ E + + D W ++ G
Sbjct: 616 EGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSG 675
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/548 (35%), Positives = 323/548 (58%), Gaps = 1/548 (0%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
S++ C + + +IH ++I GY+ + + ++ YAKVGD+ A F+++ +
Sbjct: 263 SMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQP 322
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
++VSW A+I+G + + E AL + M RSG+ N FT SSAL+ACA M + GR +
Sbjct: 323 DIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLH 382
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND 214
S+ K +LFV L+D+Y+KC +EDA + F + KD+++WNA+I G + +
Sbjct: 383 SSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDM 442
Query: 215 DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLI 274
++ LF M ++G+ + TL +IL+++ G + Q+H L +K G S + SLI
Sbjct: 443 EALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLI 502
Query: 275 DVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD 334
D Y K + A +++ D++S T++I+ +A+ +EA LF +M ++ D
Sbjct: 503 DSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQY-GQGEEALKLFLEMQDMELKPDR 561
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE 394
+ +LN CAN+++ G+Q+H KY D GN+L++MYAK G I DA RAF E
Sbjct: 562 FVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSE 621
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG 454
+ ++ ++SW+++I G A+HG+G +A++L+ +M EG+ PN +T +S+L AC+H GL E
Sbjct: 622 LTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEA 681
Query: 455 WELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACS 514
F M + P EH++C++DL R G++ A ++ +M + AS+W A+LGA
Sbjct: 682 KLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAAR 741
Query: 515 IYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGY 574
I+ + LG AA LF +EPEKS +V+L+NIY +AG W+N + R+LM + ++K PG
Sbjct: 742 IHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGM 801
Query: 575 SFLQSSKK 582
S+++ K
Sbjct: 802 SWIEVKDK 809
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 174/586 (29%), Positives = 289/586 (49%), Gaps = 65/586 (11%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
+Y LL C K+ R IHAHI +G + + +I Y+K + ARK D
Sbjct: 58 SYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDES 117
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
E ++VSW+A+ISGYAQNG AL+ F M GV+ N+FT+SS L+AC+ ++ L+ G+
Sbjct: 118 SEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGK 177
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ G + F ++FV + L+ +YAKC D+ LF+ I ++VVSWNA+
Sbjct: 178 QVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQID 237
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
F ++ LF M+ G+KP+ F+L S++ A G + + IH +IKLG +
Sbjct: 238 FCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSAN 297
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
+L+D+YAK G + A ++ + + DI+S A+I+G ++H ++A +L M K+ G
Sbjct: 298 ALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHH-EQALELLGQM--KRSG 354
Query: 332 IDDVILCL--MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
I I L L CA + LGRQ+H+ K D V L+DMY+K + DA
Sbjct: 355 ICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDAR 414
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTF---------LS 440
AF+ + +K++I+W ++I+GY+++ EA+ L+ +M EG+ N T L
Sbjct: 415 MAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQ 474
Query: 441 LLFACSHT-GLTCE-GWE----LFTDMINKYRILPRAE---------------HFSCVVD 479
++ C GL+ + G+ + +I+ Y E F+ ++
Sbjct: 475 VVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMIT 534
Query: 480 LFARRGQLESAYNM---IRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEK 536
+A+ GQ E A + ++ M +KP + S++L AC+ NL E K
Sbjct: 535 AYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACA-------------NLSAFEQGK 581
Query: 537 SVNYVVLS--------------NIYTAAGAWDNARKTRKLMEERSL 568
++ +L N+Y G+ D+A + + ER +
Sbjct: 582 QLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGI 627
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 128/467 (27%), Positives = 222/467 (47%), Gaps = 17/467 (3%)
Query: 102 MISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGR 161
+I Q D + + + + +YS L C + L+ G I I K
Sbjct: 27 LIQTVPQFSQDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86
Query: 162 FVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFR 221
++ +++ L++LY+KC A L + D+VSW+A+I G A G + F
Sbjct: 87 LSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFH 146
Query: 222 SMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYG 281
M G+K + FT S+L+A +L Q+H +++ G E + +L+ +YAK
Sbjct: 147 EMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCD 206
Query: 282 SIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLML 341
+ +L+ + + +++S AL S + + D EA LF +M+L + ++ L M+
Sbjct: 207 EFLDSKRLFDEIPERNVVSWNALFSCYVQID-FCGEAVGLFYEMVLSGIKPNEFSLSSMV 265
Query: 342 NICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVI 401
N C + + G+ IH + K +D NAL+DMYAK G++ADA F+++ +++
Sbjct: 266 NACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIV 325
Query: 402 SWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM 461
SW ++IAG H + +A+EL +MK G+ PN T S L AC+ GL G +L + +
Sbjct: 326 SWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSL 385
Query: 462 INKYRILPRAEHFSCV--VDLFARRGQLESAYNMIRQMNIKPTASL--WSAILGACSIYG 517
+ ++ ++ F V VD++++ LE A N+ P L W+AI+ S Y
Sbjct: 386 M---KMDMESDLFVSVGLVDMYSKCDLLEDAR---MAFNLLPEKDLIAWNAIISGYSQYW 439
Query: 518 NTSLGELAARNLF-DMEPEK-SVNYVVLSNIYTAAGAWDNARKTRKL 562
++ A +LF +M E N LS I + R++
Sbjct: 440 E----DMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQV 482
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 202/408 (49%), Gaps = 15/408 (3%)
Query: 12 QLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKV 71
+L +K S CP+ T S L+ C + +H+ ++ ES+L +S +
Sbjct: 345 ELLGQMKRSGICPNIF----TLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGL 400
Query: 72 IIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQ 131
+ Y+K + AR AF+ +PE+++++W A+ISGY+Q D AL +F M + G+ NQ
Sbjct: 401 VDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQ 460
Query: 132 FTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER 191
T S+ L++ A ++ + R + G K F +++V ++L+D Y KC +EDA +FE
Sbjct: 461 TTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEE 520
Query: 192 IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI 251
D+VS+ +MI A G +++ LF M +KPD F S+L A +
Sbjct: 521 CTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQG 580
Query: 252 SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD 311
Q+H I+K G SL+++YAK GSI A + + + + I+S +A+I G A+
Sbjct: 581 KQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQ- 639
Query: 312 DNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV-----ASLNLGRQIHAFAFKYQSS 366
H ++A LF M+ + + + + L +L C + A L F FK
Sbjct: 640 HGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQE 699
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKH 413
+ A +ID+ ++G+I +A ++M + N W +L+ H
Sbjct: 700 HYA----CMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIH 743
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/531 (37%), Positives = 314/531 (59%), Gaps = 2/531 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IH + G+ S + +I Y K G+V SA K FD + +R+VVSW +MISG NG+
Sbjct: 575 IHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGF 634
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+AL F ML V + T +++ ACA + L GR + G K F + +
Sbjct: 635 SHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNT 694
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
LLD+Y+KCG + DA FE++ +K VVSW ++I +G DD+ LF M +G+ PD
Sbjct: 695 LLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPD 754
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
+++ S+L A G L K +H+ I K + ++ +L+D+YAK GS+ AY ++
Sbjct: 755 VYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFS 814
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
+ DI+S +I G++++ + EA LF +M K+ D + + +L C ++A+L
Sbjct: 815 QIPVKDIVSWNTMIGGYSKN-SLPNEALKLFAEM-QKESRPDGITMACLLPACGSLAALE 872
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
+GR IH + S + V NALIDMY K G + A FD + +K++I+WT +I+G
Sbjct: 873 IGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCG 932
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
HG G+EAI ++KM+ G+ P+++TF S+L+ACSH+GL EGW F MI++ + P+
Sbjct: 933 MHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKL 992
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
EH++C+VDL AR G L AYN+I M IKP A++W A+L C I+ + L E A ++F+
Sbjct: 993 EHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFE 1052
Query: 532 MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+EP+ + YV+L+NIY A W+ +K R+ + +R L+K+PG S+++ K
Sbjct: 1053 LEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGK 1103
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 145/541 (26%), Positives = 269/541 (49%), Gaps = 27/541 (4%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLS 68
+ G L+ A++ + LD + Y S+LQ C + K ++ ++H+ I +NG L
Sbjct: 430 EVGDLRNAVELLRMSQKSELDLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLG 489
Query: 69 TKVIIFYAKVGDVLSARKAFDRMPERN-VVSWTAMISGYAQNGYDENALLVFSAMLRSGV 127
K++ Y G + R+ FD + N V W M+S YA+ G ++ +F M + G+
Sbjct: 490 AKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGI 549
Query: 128 RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWI 187
N +T+S L+ A + + + I G + K F V ++L+ Y K G ++ A
Sbjct: 550 TGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHK 609
Query: 188 LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGG 245
LF+ + +DVVSWN+MI G M GF+ + F M+ + D TL + + A+VG
Sbjct: 610 LFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGS 669
Query: 246 IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALI 305
+ L + +H +K +L+D+Y+K G++ A Q + M + ++S T+LI
Sbjct: 670 LSLGR--ALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLI 727
Query: 306 SGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS 365
+ + R+ + +A LF +M K + D + +L+ CA SL+ GR +H + K
Sbjct: 728 AAYVREGLYD-DAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNM 786
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKK 425
+ V NAL+DMYAK G + +A F ++ K+++SW ++I GY+K+ +EA++L+ +
Sbjct: 787 ALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAE 846
Query: 426 MKHEGMVPNDVTFLSLLFACS-----HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDL 480
M+ E P+ +T LL AC G G L ++ + + ++D+
Sbjct: 847 MQKESR-PDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVA------NALIDM 899
Query: 481 FARRGQLESA---YNMIRQMNIKPTASLWSAILGACSIY--GNTSLGELAARNLFDMEPE 535
+ + G L A ++MI + ++ W+ ++ C ++ GN ++ + ++P+
Sbjct: 900 YVKCGSLVHARLLFDMIPEKDLIT----WTVMISGCGMHGLGNEAIATFQKMRIAGIKPD 955
Query: 536 K 536
+
Sbjct: 956 E 956
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 218/424 (51%), Gaps = 20/424 (4%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D +T ++ + C + + +H + + + + ++ Y+K G++ A +A
Sbjct: 652 VDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQA 711
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F++M ++ VVSWT++I+ Y + G ++A+ +F M GV + ++ +S L ACA L
Sbjct: 712 FEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSL 771
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
GR + I+K L V +AL+D+YAKCG +E+A+++F +I KD+VSWN MIGG
Sbjct: 772 DKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGY 831
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESS 266
+ +++ LF M ++ +PD T+ +L A G + ++I + IH I++ G S
Sbjct: 832 SKNSLPNEALKLFAEMQKES-RPDGITMACLLPA-CGSLAALEIGRGIHGCILRNGYSSE 889
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ +LID+Y K GS+ A L+ + + D+I+ T +ISG EA F+ M
Sbjct: 890 LHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGM-HGLGNEAIATFQKMR 948
Query: 327 LKKMGIDDVILCLMLNICANVASLNLG-----RQIHAFAFKYQSSYDAAVGNALIDMYAK 381
+ + D++ +L C++ LN G I + + + A ++D+ A+
Sbjct: 949 IAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYA----CMVDLLAR 1004
Query: 382 SGEIADANRAFDEMGDK-NVISWTSLIAGYAKHGYGHEAIELYKKMKHE--GMVPNDVTF 438
+G ++ A + M K + W +L+ G H H+ +EL +K+ + P++ +
Sbjct: 1005 TGNLSKAYNLIETMPIKPDATIWGALLCGCRIH---HD-VELAEKVAEHVFELEPDNAGY 1060
Query: 439 LSLL 442
LL
Sbjct: 1061 YVLL 1064
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/552 (37%), Positives = 312/552 (56%), Gaps = 30/552 (5%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ S+L+ C + IHAH I ++SN + T ++ YAK +L A F+
Sbjct: 140 TWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELA 199
Query: 92 PE-RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
P+ RN V WTAM++GY+QNG A+ F M G+ NQFT+ S L AC + G
Sbjct: 200 PDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFG 259
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ G I + F N+FV SAL+D+Y+KCG + +A + E +E D VSWN+MI G Q
Sbjct: 260 AQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQ 319
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
G +++ LFR M + MK D FT S+L +++ +H LI+K G E+ +
Sbjct: 320 GLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVN 379
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
+L+D+YAK G A+ ++ M D+IS T+L++G + ++ +EA LF +M + +
Sbjct: 380 NALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSY-EEALRLFCEMRIMGI 438
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
D +++ +L+ CA + L G+Q+HA K +V N+L+ MYAK G I DAN+
Sbjct: 439 HPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANK 498
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
FD M ++VI+WT+LI GYA++G G + H GL
Sbjct: 499 VFDSMEIQDVITWTALIVGYAQNGRGRD----------------------------HAGL 530
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
G F M Y I P EH++C++DL R G+L A ++ QM ++P A++W A+L
Sbjct: 531 VEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALL 590
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
AC ++GN LGE AA NLF++EP+ +V YV+LSN+Y+AAG W+ A KTR+LM+ R + K
Sbjct: 591 AACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSK 650
Query: 571 NPGYSFLQSSKK 582
PG S+++ S K
Sbjct: 651 EPGCSWIEMSSK 662
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/438 (32%), Positives = 232/438 (52%), Gaps = 6/438 (1%)
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
YA G + ARK F P R+ ++W+++ISGY + G D AL +F M G R NQFT+
Sbjct: 82 YANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTW 141
Query: 135 SSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE-RIE 193
S LR C+ L+ G+ I K +F N FV + L+D+YAKC I +A LFE +
Sbjct: 142 GSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPD 201
Query: 194 RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI-S 252
+++ V W AM+ G + G + FR M +G++ + FT SIL A G I +
Sbjct: 202 KRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTA-CGSISACGFGA 260
Query: 253 QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDD 312
Q+H I++ G ++ + +L+D+Y+K G + +A ++ +M D +S ++I G R
Sbjct: 261 QVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVR-Q 319
Query: 313 NHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG 372
+EA LF+ M L+ M ID+ +LN + V + +H+ K V
Sbjct: 320 GLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVN 379
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
NAL+DMYAK G A F++M DK+VISWTSL+ G +G EA+ L+ +M+ G+
Sbjct: 380 NALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIH 439
Query: 433 PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYN 492
P+ + ++L AC+ + G ++ + + K + + +V ++A+ G +E A
Sbjct: 440 PDQIVIAAVLSACAELTVLEFGKQVHANFL-KSGLGSSLSVDNSLVSMYAKCGCIEDANK 498
Query: 493 MIRQMNIKPTASLWSAIL 510
+ M I+ + W+A++
Sbjct: 499 VFDSMEIQDVIT-WTALI 515
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 195/389 (50%), Gaps = 28/389 (7%)
Query: 170 SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
+ ++ YA G + +A LF + ++W+++I G G + ++ LF M +G +
Sbjct: 76 NTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGER 135
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
P+ FT GS+LR + L K QIH IK +S+ + L+D+YAK I A L
Sbjct: 136 PNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYL 195
Query: 290 YR-SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
+ + K + + TA+++G++++ + K A + F+DM + + + +L C +++
Sbjct: 196 FELAPDKRNHVLWTAMVTGYSQNGDGHK-AIECFRDMRGEGIECNQFTFPSILTACGSIS 254
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA 408
+ G Q+H + + VG+AL+DMY+K G++++A R + M + +SW S+I
Sbjct: 255 ACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIV 314
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS-----------HTGLTCEGWEL 457
G + G G EA+ L++ M M ++ T+ S+L S H+ + G+E
Sbjct: 315 GCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFE- 373
Query: 458 FTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
Y+++ A +VD++A+RG + A+++ +M K S W++++ C G
Sbjct: 374 ------AYKLVNNA-----LVDMYAKRGYFDYAFDVFEKMTDKDVIS-WTSLVTGCVHNG 421
Query: 518 N--TSLGELAARNLFDMEPEKSVNYVVLS 544
+ +L + + P++ V VLS
Sbjct: 422 SYEEALRLFCEMRIMGIHPDQIVIAAVLS 450
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 93/193 (48%), Gaps = 5/193 (2%)
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
F D N +I YA SG + +A + F E ++ I+W+SLI+GY ++G EA+
Sbjct: 64 FDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEAL 123
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDL 480
EL+ +M++EG PN T+ S+L CS L +G ++ I K + A + +VD+
Sbjct: 124 ELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAI-KTQFDSNAFVVTGLVDM 182
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEK-SVN 539
+A+ + A + K LW+A++ S G+ G A DM E N
Sbjct: 183 YAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGD---GHKAIECFRDMRGEGIECN 239
Query: 540 YVVLSNIYTAAGA 552
+I TA G+
Sbjct: 240 QFTFPSILTACGS 252
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLL----DPSTYMSLLQFCIDKKAERQAHLIHAHII 57
++V G ++AL+ L C ++ D ++L C + +HA+ +
Sbjct: 412 SLVTGCVHNGSYEEALR--LFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFL 469
Query: 58 TNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
+G S+L + ++ YAK G + A K FD M ++V++WTA+I GYAQNG
Sbjct: 470 KSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNG 522
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/525 (38%), Positives = 316/525 (60%), Gaps = 3/525 (0%)
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G+ +L LS +I+ Y K G + A FDRM +RNVVSWTA++ G+ QNG +LL+F
Sbjct: 2 GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
S M SGV+ N FT+S+ L+AC + L GR I K F V ++++D+Y+KC
Sbjct: 62 SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKC 121
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G I +A +FE + ++++SWNAMI G + GF + + LF+ M G D FT S L
Sbjct: 122 GRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTL 181
Query: 240 RASVGGIELMKISQIHDLIIKLGLESS--NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
+A + + +QIH +I G S + G+LID+Y K G + A +++ + +
Sbjct: 182 KACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKH 241
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
+IS TALI G+A++ N + E+ +LF+ + + +D IL M+ + A+ A + G+Q+H
Sbjct: 242 VISWTALILGYAQEGNLA-ESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMH 300
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
AFA K S D +V N+++DMY K G I +A R F EM +NVISWT +I GY KHG G
Sbjct: 301 AFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGK 360
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
EAI L+ +M+ + P+DVT+L++L CSH+GL +G E F+ + + + I R EH++C+
Sbjct: 361 EAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACM 420
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKS 537
VDL R G+L+ A N++ M ++ +W +L AC ++G+ LG+ L ++ E
Sbjct: 421 VDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENP 480
Query: 538 VNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
VNYV++SNIY AG W + R+L++ + L+K G S+++ K+
Sbjct: 481 VNYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKE 525
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/368 (30%), Positives = 186/368 (50%), Gaps = 7/368 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IH + G++ + +I Y+K G + A F+ MP RN++SW AMI+GY G+
Sbjct: 95 IHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVRNLISWNAMIAGYTVAGF 154
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVE--NLFVK 169
E AL++F M G ++FT++S L+AC+ + ++ G I + G F+ N V
Sbjct: 155 CEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVA 214
Query: 170 SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
AL+DLY KCG + A +F IE K V+SW A+I G A +G +S LFR + ++
Sbjct: 215 GALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLAESMELFRQLRESSIQ 274
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
D F L S++ + + Q+H IK+ + S++D+Y K G I A +L
Sbjct: 275 VDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERL 334
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ M ++IS T +I+G+ + KEA LF +M L DDV +L C++
Sbjct: 335 FSEMPARNVISWTVMITGYGK-HGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGL 393
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGN--ALIDMYAKSGEIADANRAFDEMG-DKNVISWTSL 406
+ G++ + Y A V + ++D+ ++G + +A D M + NV W +L
Sbjct: 394 VEKGQEYFSRLCSYH-GIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTL 452
Query: 407 IAGYAKHG 414
++ HG
Sbjct: 453 LSACRVHG 460
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 133/270 (49%), Gaps = 3/270 (1%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG--YESNLHLSTKVIIFYAKVGDVLSA 84
LD T+ S L+ C D A ++ + IHA +IT G Y N ++ +I Y K G + A
Sbjct: 171 FLDEFTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMA 230
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
R+ F + E++V+SWTA+I GYAQ G ++ +F + S ++ + F SS + A
Sbjct: 231 RRVFSHIEEKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADF 290
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
+Q G+ + K ++ V +++LD+Y KCG I +A LF + ++V+SW MI
Sbjct: 291 ALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMI 350
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFT-LGSILRASVGGIELMKISQIHDLIIKLGL 263
G G ++ LF M +PD T L +L S G+ L G+
Sbjct: 351 TGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGI 410
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
++ + ++D+ + G ++ A L SM
Sbjct: 411 KARVEHYACMVDLLGRAGRLKEAKNLVDSM 440
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 10/171 (5%)
Query: 47 RQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGY 106
+Q +HA I ++ + ++ Y K G + A + F MP RNV+SWT MI+GY
Sbjct: 294 QQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGY 353
Query: 107 AQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG-----RMIQGSIQKGR 161
++G + A+ +F M + TY + L C+ ++ G R+ K R
Sbjct: 354 GKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKAR 413
Query: 162 FVENLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGGLAMQG 211
VE+ + ++DL + G +++A L + + +V W ++ + G
Sbjct: 414 -VEHY---ACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHG 460
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/556 (35%), Positives = 308/556 (55%), Gaps = 1/556 (0%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
+ D Y+ +L+ C+ +K A +H II + E N H+ ++ Y + G + AR
Sbjct: 25 ITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARC 84
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FD + +++ SW AMI+GY ++ + E+A+ +F M GV+ N TY L+ACA +
Sbjct: 85 VFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSA 144
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
L+ G+ + I+ G ++ V +ALL +Y KCG I +A +F+ + D++SW MIG
Sbjct: 145 LKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGA 204
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
A G +++ L M ++G KP+ T SIL A L + ++H + GLE
Sbjct: 205 YAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELD 264
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
++ +L+ +YAK GSI A ++ M D++S +I FA + EA+DLF M
Sbjct: 265 VRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFA-EHGRGHEAYDLFLQMQ 323
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ D ++ +LN CA+ +L ++IH A D VG AL+ MY+KSG I
Sbjct: 324 TEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSID 383
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
DA FD M +NV+SW ++I+G A+HG G +A+E++++M G+ P+ VTF+++L ACS
Sbjct: 384 DARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACS 443
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
H GL EG + M Y I P H +C+VDL R G+L A I M + P + W
Sbjct: 444 HAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATW 503
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
A+LG+C YGN LGEL A+ ++P+ + YV+LSNIY AG WD R +M ER
Sbjct: 504 GALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVRTMMRER 563
Query: 567 SLRKNPGYSFLQSSKK 582
+RK PG S+++ K
Sbjct: 564 GIRKEPGRSWIEVDNK 579
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 132/449 (29%), Positives = 232/449 (51%), Gaps = 14/449 (3%)
Query: 115 ALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLD 174
A++V L+ G+ + F Y L+ C + + L + + I K R +N V + LL
Sbjct: 12 AIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLH 71
Query: 175 LYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFT 234
+Y +CG +++A +F+ + +K SWNAMI G +D+ LFR M +G++P+ T
Sbjct: 72 VYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGT 131
Query: 235 LGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML 294
IL+A L ++H I GLES ++ +L+ +Y K GSI A +++ +++
Sbjct: 132 YMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLM 191
Query: 295 KTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGR 354
DIIS T +I +A+ N KEA+ L M + + + +LN CA+ +L +
Sbjct: 192 NHDIISWTVMIGAYAQSGN-GKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVK 250
Query: 355 QIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG 414
++H A D VG AL+ MYAKSG I DA FD M ++V+SW +I +A+HG
Sbjct: 251 RVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHG 310
Query: 415 YGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAE-- 472
GHEA +L+ +M+ EG P+ + FLS+L AC+ G + I+++ + E
Sbjct: 311 RGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGAL-----EWVKKIHRHALDSGLEVD 365
Query: 473 --HFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIY--GNTSLGELAARN 528
+ +V ++++ G ++ A + +M ++ S W+A++ + + G +L
Sbjct: 366 VRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVS-WNAMISGLAQHGLGQDALEVFRRMT 424
Query: 529 LFDMEPEKSVNYVVLSNIYTAAGAWDNAR 557
++P++ V +V + + + AG D R
Sbjct: 425 AHGVKPDR-VTFVAVLSACSHAGLVDEGR 452
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 128/295 (43%), Gaps = 44/295 (14%)
Query: 313 NHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG 372
N EA + + + + + D + +L C L +Q+H K + +A V
Sbjct: 7 NTLSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVM 66
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
N L+ +Y + G + +A FD + K+ SW ++IAGY +H + +A+ L+++M HEG+
Sbjct: 67 NNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQ 126
Query: 433 PNDVTFLSLLFACS----------------HTGLTC-------------------EGWEL 457
PN T++ +L AC+ H GL E +
Sbjct: 127 PNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRI 186
Query: 458 FTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMN---IKPTASLWSAILGACS 514
F +++N I ++ ++ +A+ G + AY ++ QM KP A + +IL AC+
Sbjct: 187 FDNLMNHDII-----SWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACA 241
Query: 515 IYGNTSLGELAARNLFDMEPEKSVNY-VVLSNIYTAAGAWDNARKTRKLMEERSL 568
G + R+ D E V L +Y +G+ D+AR M+ R +
Sbjct: 242 SEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDV 296
>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/581 (35%), Positives = 324/581 (55%), Gaps = 5/581 (0%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITN 59
+++ + GQ AL+F + + P T+ S+++ C +HAH++ +
Sbjct: 134 SVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKS 193
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
+ +++ +I Y K ++ A F RM R+++SW +MI+G++Q GY+ AL F
Sbjct: 194 EFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYF 253
Query: 120 SAMLRSGVR-ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
ML GV N+F + S AC+ + + GR + G K ++F +L D+YAK
Sbjct: 254 KEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAK 313
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
CG + A ++F +I R D+V+WNA+I G A G ++ F M QG+ PD T+ S+
Sbjct: 314 CGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSL 373
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTD 297
L A EL + Q+H I K+GL+ + +L+ +YAK +R A + M D
Sbjct: 374 LCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNAD 433
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
++S A+++ R D ++E F L K M + + D + L +L A S+ +G Q+H
Sbjct: 434 LVSWNAILTACMRHD-QAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVH 492
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
+A K + D +V N LID+YAK G + A++ FD M + +V+SW+SLI GYA+ GYG
Sbjct: 493 CYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGE 552
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
EA++L+K M+ + PN VTF+ +L ACSH GL EGW+L+ M ++ I P EH SC+
Sbjct: 553 EALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCM 612
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKS 537
VDL AR G L A I QM P +W +L AC +GN +G+ AA N+ ++P S
Sbjct: 613 VDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNS 672
Query: 538 VNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+V+L NIY + G W++ + R LM++R +RK PG S+++
Sbjct: 673 AAHVLLCNIYASKGNWEDVARLRSLMKQRGVRKVPGQSWIE 713
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 160/534 (29%), Positives = 269/534 (50%), Gaps = 25/534 (4%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L STY L+ C ++ IH H++ + +L L ++ Y K + A+K
Sbjct: 61 LTLSTYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKV 120
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD MPERNVVSWT++I+GY+QNG NAL + ML+SGV +QFT+ S ++AC+ + +
Sbjct: 121 FDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDI 180
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
GR + + K F ++ ++AL+ +Y K I DA +F R+ +D++SW +MI G
Sbjct: 181 GLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGF 240
Query: 208 AMQGFNDDSFWLFRSMMRQGMK-PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
+ G+ ++ F+ M+ QG+ P+ F GS+ A ++ Q+H + IK GL
Sbjct: 241 SQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRD 300
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
SL D+YAK G + A ++ + + D+++ A+I+GFA + +KEA F M
Sbjct: 301 VFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGD-AKEAIAFFSQMR 359
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ + D++ + +L C + + L G Q+H + K D V N L+ MYAK E+
Sbjct: 360 HQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELR 419
Query: 387 DANRAFDEM-GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
DA F+EM + +++SW +++ +H E L K M P+ +T ++L A
Sbjct: 420 DAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGAS 479
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSC-------VVDLFARRGQLESAYNMIRQMN 498
+ T + ++ N+ +C ++DL+A+ G L++A+ + M
Sbjct: 480 AET--------VSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSM- 530
Query: 499 IKPTASLWSA-ILGACSI-YGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAA 550
I P WS+ ILG YG +L D++P N+V + TA
Sbjct: 531 INPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKP----NHVTFVGVLTAC 580
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/536 (36%), Positives = 308/536 (57%), Gaps = 2/536 (0%)
Query: 47 RQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGY 106
++ +H +++ G+ SN + +I Y K G V SA FD + E +VVSW +MI+G
Sbjct: 487 KECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGC 546
Query: 107 AQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENL 166
NG+ N L +F ML GV + T S L A A + L GR + G K F E +
Sbjct: 547 VVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEV 606
Query: 167 FVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ 226
+ LLD+Y+KCG + A +F ++ +VSW + I +G D+ LF M +
Sbjct: 607 VFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSK 666
Query: 227 GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSA 286
G++PD +T+ SI+ A L K +H +IK G+ S+ +T +LI++YAK GS+ A
Sbjct: 667 GVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEA 726
Query: 287 YQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICAN 346
++ + DI+S +I G++++ + EA +LF DM K+ DD+ + +L CA
Sbjct: 727 RLVFSKIPVKDIVSWNTMIGGYSQN-SLPNEALELFLDM-QKQFKPDDITMACVLPACAG 784
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
+A+L+ GR+IH + D V AL+DMYAK G + A FD + K++ISWT +
Sbjct: 785 LAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVM 844
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYR 466
IAGY HG+G+EAI + +M+ G+ P++ +F +L ACSH+GL EGW+ F M N+
Sbjct: 845 IAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECG 904
Query: 467 ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAA 526
+ P+ EH++CVVDL AR G L AY I M IKP ++W +L C I+ + L E A
Sbjct: 905 VEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVA 964
Query: 527 RNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
++F++EP+ + YVVL+N+Y A W+ +K RK M++R ++NPG S+++ K
Sbjct: 965 EHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGK 1020
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 153/539 (28%), Positives = 285/539 (52%), Gaps = 12/539 (2%)
Query: 11 GQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTK 70
G L+ A++ L ++Y S+LQ C +KK+ +H+ II+NG + L K
Sbjct: 350 GDLRNAIELLTKSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAK 409
Query: 71 VIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
++ Y GD++ RK FD++ V W ++S YA+ G ++ +F M + GV N
Sbjct: 410 LVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGN 469
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE 190
+T++ L+ A + ++ + + G + K F N V ++L+ Y K G +E A LF+
Sbjct: 470 CYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFD 529
Query: 191 RIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIEL 248
+ DVVSWN+MI G + GF+ + +F M+ G++ D TL S+L A++G + L
Sbjct: 530 ELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSL 589
Query: 249 MKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGF 308
+ +H +K + +L+D+Y+K G++ A +++ M T I+S T+ I+ +
Sbjct: 590 GR--ALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAY 647
Query: 309 ARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYD 368
R+ +S +A LF +M K + D + +++ CA +SL+ GR +H++ K +
Sbjct: 648 VREGLYS-DAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSN 706
Query: 369 AAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKH 428
V NALI+MYAK G + +A F ++ K+++SW ++I GY+++ +EA+EL+ M+
Sbjct: 707 LPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQK 766
Query: 429 EGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSC-VVDLFARRGQL 487
+ P+D+T +L AC+ +G E+ ++ + H +C +VD++A+ G L
Sbjct: 767 Q-FKPDDITMACVLPACAGLAALDKGREIHGHILRRGYF--SDLHVACALVDMYAKCGLL 823
Query: 488 ESAYNMIRQMNIKPTASLWSAILGACSI--YGNTSLGELAARNLFDMEPEKSVNYVVLS 544
A ++ M K W+ ++ + +GN ++ + +EP++S V+L+
Sbjct: 824 VLA-QLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILN 881
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 94/180 (52%), Gaps = 2/180 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T +L C A + IH HI+ GY S+LH++ ++ YAK G ++ A+ F
Sbjct: 771 DDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLF 830
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D +P+++++SWT MI+GY +G+ A+ F+ M +G+ ++ ++S L AC+ L
Sbjct: 831 DMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLN 890
Query: 149 GGRMIQGSIQKGRFVE-NLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGG 206
G S++ VE L + ++DL A+ G + A+ E + + D W ++ G
Sbjct: 891 EGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSG 950
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/528 (36%), Positives = 312/528 (59%), Gaps = 2/528 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H +I+ +G+ + ++ FY K V SARK FD M ER+V+SW ++I+GY NG
Sbjct: 217 LHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGL 276
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
E L VF ML SG+ + T S CA R + GR + K F +
Sbjct: 277 AEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNT 336
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
LLD+Y+KCG ++ A ++F + + VVS+ +MI G A +G ++ LF M +G+ PD
Sbjct: 337 LLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPD 396
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
+T+ ++L L + ++H+ I + + ++ +L+D+YAK GS+R A ++
Sbjct: 397 VYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFS 456
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL-KKMGIDDVILCLMLNICANVASL 350
M DIIS +I G++++ ++ EA LF +++ K+ D+ + +L CA++++
Sbjct: 457 EMRVKDIISWNTVIGGYSKN-CYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAF 515
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
+ GR+IH + + D V N+L+DMYAK G + A FD++ K+++SWT +IAGY
Sbjct: 516 DKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGY 575
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
HG+G EAI L+ +M+ G+ P++++F+SLL+ACSH+GL EGW F M ++ +I P
Sbjct: 576 GMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPT 635
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
EH++C+VD+ AR G L AY I M I P A++W A+L C I+ + L E A +F
Sbjct: 636 VEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVF 695
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
++EPE + YV+++NIY A W+ ++ RK + +R LRKNPG S+++
Sbjct: 696 ELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIE 743
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 142/511 (27%), Positives = 265/511 (51%), Gaps = 6/511 (1%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLS 68
++G LK A+K +DP T S+LQ C D K+ + + I NG+ + +L
Sbjct: 73 ESGNLKNAVKLLHVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLG 132
Query: 69 TKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR 128
+K+ + Y GD+ A + FD++ + W +++ A++G ++ +F M+ SGV
Sbjct: 133 SKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVE 192
Query: 129 ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWIL 188
+ +T+S ++ + +R + GG + G I K F E V ++L+ Y K ++ A +
Sbjct: 193 MDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKV 252
Query: 189 FERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIEL 248
F+ + +DV+SWN++I G G + +F M+ G++ D T+ S+ A L
Sbjct: 253 FDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVF-AGCADSRL 311
Query: 249 MKISQ-IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG 307
+ + + +H +K ++ +L+D+Y+K G + SA ++R M ++S T++I+G
Sbjct: 312 ISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAG 371
Query: 308 FARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSY 367
+AR + + EA LF++M + + D + +LN CA L+ G+++H + + +
Sbjct: 372 YAR-EGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGF 430
Query: 368 DAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMK 427
D V NAL+DMYAK G + +A F EM K++ISW ++I GY+K+ Y +EA+ L+ +
Sbjct: 431 DIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLL 490
Query: 428 HEG-MVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
E P++ T +L AC+ +G E+ ++ R S +VD++A+ G
Sbjct: 491 VEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS-LVDMYAKCGA 549
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYG 517
L A + + K S W+ ++ ++G
Sbjct: 550 LLLARLLFDDITSKDLVS-WTVMIAGYGMHG 579
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 198/390 (50%), Gaps = 6/390 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D +T +S+ C D + +H + + ++ Y+K GD+ SA+
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVV 353
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F M R+VVS+T+MI+GYA+ G A+ +F M G+ + +T ++ L CAR R L
Sbjct: 354 FREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLL 413
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ + I++ ++FV +AL+D+YAKCG + +A ++F + KD++SWN +IGG
Sbjct: 414 DEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGY 473
Query: 208 AMQGFNDDSFWLFRSMM-RQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
+ + +++ LF ++ + PD T+ +L A K +IH I++ G S
Sbjct: 474 SKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSD 533
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ SL+D+YAK G++ A L+ + D++S T +I+G+ KEA LF M
Sbjct: 534 RHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGM-HGFGKEAIALFNQMR 592
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN--ALIDMYAKSGE 384
+ D++ +L C++ ++ G + +++ + V + ++DM A++G
Sbjct: 593 QAGIEPDEISFVSLLYACSHSGLVDEGWRFFNI-MRHECKIEPTVEHYACIVDMLARTGN 651
Query: 385 IADANRAFDEMG-DKNVISWTSLIAGYAKH 413
++ A R + M + W +L+ G H
Sbjct: 652 LSKAYRFIENMPIPPDATIWGALLCGCRIH 681
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/543 (35%), Positives = 318/543 (58%), Gaps = 6/543 (1%)
Query: 42 DKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTA 101
D +A RQ +H ++ GYE ++ + ++ Y+K+GD+ A F++MP +VVSW A
Sbjct: 220 DLEAGRQ---VHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNA 276
Query: 102 MISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGR 161
ISG +G+D AL + M SG+ N FT SS L+ACA GR I G + K
Sbjct: 277 FISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAV 336
Query: 162 FVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFR 221
+ FV L+D+YAK G+++DA +F+ + R+D++ WNA+I G + G + + LF
Sbjct: 337 ADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFH 396
Query: 222 SMMRQGMKPDC--FTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAK 279
M ++G+ D TL S+L+++ + Q+H L K+GL S + + LID Y K
Sbjct: 397 RMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWK 456
Query: 280 YGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCL 339
G + A ++++ DIIS T +++ ++ D H ++A LF M+ K + D +L
Sbjct: 457 CGQLDYAIKVFKESRSDDIISSTTMMTALSQCD-HGEDAIKLFVQMLRKGLEPDSFVLSS 515
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN 399
+LN C ++++ G+Q+HA K Q + D GNAL+ YAK G I DA+ AF + ++
Sbjct: 516 LLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERG 575
Query: 400 VISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFT 459
++SW+++I G A+HG+G A++L+ +M EG+ PN +T S+L AC+H GL + + F
Sbjct: 576 IVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFE 635
Query: 460 DMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNT 519
M + I EH++C++D+ R G+LE A ++ M + A++W A+LGA ++ +
Sbjct: 636 SMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDP 695
Query: 520 SLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQS 579
LG +AA LF +EPEKS +V+L+N Y +AG WD K RKLM++ +++K P S+++
Sbjct: 696 ELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEI 755
Query: 580 SKK 582
K
Sbjct: 756 KDK 758
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 164/527 (31%), Positives = 273/527 (51%), Gaps = 22/527 (4%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM----PERNVVSWTAMISGYA 107
+HA + ++ ++ ++ Y G V AR+ FD ERN VSW MIS Y
Sbjct: 122 VHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYV 181
Query: 108 QNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLF 167
+N +A+ VF M+ SG R N+F +S + AC R L+ GR + G++ + + +++F
Sbjct: 182 KNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVF 241
Query: 168 VKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
+AL+D+Y+K G IE A +FE++ DVVSWNA I G G + + L M G
Sbjct: 242 TANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSG 301
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
+ P+ FTL S+L+A G QIH ++K + + L+D+YAK+G + A
Sbjct: 302 LVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDAR 361
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGID-DV---ILCLMLNI 343
+++ M + D+I ALISG + D H E LF M +K G+D DV L +L
Sbjct: 362 KVFDFMPRRDLILWNALISGCSHDGRHG-EVLSLFHRM--RKEGLDLDVNRTTLASVLKS 418
Query: 344 CANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISW 403
A+ ++ RQ+HA A K D+ V N LID Y K G++ A + F E ++IS
Sbjct: 419 TASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISS 478
Query: 404 TSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMIN 463
T+++ ++ +G +AI+L+ +M +G+ P+ SLL AC+ +G ++ +I
Sbjct: 479 TTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLI- 537
Query: 464 KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGE 523
K + + +V +A+ G +E A + + S WSA++G + +G+
Sbjct: 538 KRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVS-WSAMIGGLAQHGHGK--- 593
Query: 524 LAARNLFDMEPEKSV--NYVVLSNIYTA---AGAWDNARKTRKLMEE 565
A +LF ++ V N++ L+++ +A AG D+A+K + M+E
Sbjct: 594 -RALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKE 639
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 135/474 (28%), Positives = 233/474 (49%), Gaps = 15/474 (3%)
Query: 30 PSTYMSLL-QFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
P T S L +F + AHL H+H++ +G + S ++ Y++ +AR F
Sbjct: 4 PETIGSALARFGTSRSLFAGAHL-HSHLLKSGLLAGF--SNHLLTLYSRCRLPSAARAVF 60
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D +P+ VSW+++++ Y+ NG +ALL F AM GV N+F L+ +R+
Sbjct: 61 DEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPDVRF-- 118
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI----ERKDVVSWNAMI 204
G + R V ++FV +AL+ +Y G +++A +F+ ++ VSWN MI
Sbjct: 119 -GAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMI 177
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
+ D+ +FR M+ G +P+ F ++ A G +L Q+H +++ G E
Sbjct: 178 SAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYE 237
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+L+D+Y+K G I A ++ M D++S A ISG H A +L
Sbjct: 238 KDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVT-HGHDHRALELLLQ 296
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M + + L +L CA + NLGRQIH F K + +D V L+DMYAK G
Sbjct: 297 MKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGF 356
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG--MVPNDVTFLSLL 442
+ DA + FD M +++I W +LI+G + G E + L+ +M+ EG + N T S+L
Sbjct: 357 LDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVL 416
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQ 496
+ + + C ++ + K +L + + ++D + + GQL+ A + ++
Sbjct: 417 KSTASSEAICHTRQVHA-LAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKE 469
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 193/416 (46%), Gaps = 21/416 (5%)
Query: 11 GQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLS 68
G +AL+ L + L P+ + S+L+ C A IH ++ + + ++
Sbjct: 285 GHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVA 344
Query: 69 TKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG-- 126
++ YAK G + ARK FD MP R+++ W A+ISG + +G L +F M + G
Sbjct: 345 VGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLD 404
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
+ N+ T +S L++ A + R + +K + + V + L+D Y KCG ++ A
Sbjct: 405 LDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAI 464
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+F+ D++S M+ L+ +D+ LF M+R+G++PD F L S+L A
Sbjct: 465 KVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLS 524
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
+ Q+H +IK S +L+ YAK GSI A + + + I+S +A+I
Sbjct: 525 AYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIG 584
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
G A+ H K A DLF M+ + + + + L +L+ C + ++ + KY S
Sbjct: 585 GLAQ-HGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAK-------KYFES 636
Query: 367 YDAAVG--------NALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKH 413
G +ID+ ++G++ DA + M N W +L+ H
Sbjct: 637 MKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVH 692
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/560 (34%), Positives = 321/560 (57%), Gaps = 34/560 (6%)
Query: 23 CPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVL 82
CPD T+ S L+ C ++ +H+ +I G++ + + +I YAK D
Sbjct: 172 CPDNF----TFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEE 227
Query: 83 SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS--GVRANQFTYSSALRA 140
S K FD M ERN V+W ++IS AQ G+ +AL++F M S G++ +QFT+++ L
Sbjct: 228 SCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTL 287
Query: 141 CARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSW 200
CA R GR I + + +N+ V++ L+ +Y++CG + A +F R+ ++ SW
Sbjct: 288 CANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSW 347
Query: 201 NAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIK 260
N+MI G G ++ LF+ M G+KPDCF+L S+L + V + K ++H+ I++
Sbjct: 348 NSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVR 407
Query: 261 LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC--TALISGFARDDNHSKEA 318
+E L L+D+YAK GS+ A+++Y +K D + ++++G+A + KE+
Sbjct: 408 NTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYA-NKGLKKES 466
Query: 319 FDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDM 378
F+ F +M+ + D + + ++N+ + AL+DM
Sbjct: 467 FNHFLEMLESDIEYDVLTMVTIVNL-------------------------LVLETALVDM 501
Query: 379 YAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTF 438
Y+K G I A FD M KN++SW ++I+GY+KHG EA+ LY++M +GM PN+VTF
Sbjct: 502 YSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTF 561
Query: 439 LSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMN 498
L++L ACSHTGL EG +FT M Y I +AEH++C+VDL R G+LE A + +M
Sbjct: 562 LAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMP 621
Query: 499 IKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARK 558
I+P S W A+LGAC ++ + +G LAA+ LF+++P+ YV++SNIY AAG W
Sbjct: 622 IEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVED 681
Query: 559 TRKLMEERSLRKNPGYSFLQ 578
R++M+ + ++K+PG S+++
Sbjct: 682 IRQMMKMKGVKKDPGVSWIE 701
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 159/560 (28%), Positives = 280/560 (50%), Gaps = 34/560 (6%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVG---D 80
P + ++P Y SL+Q CID + ++ IH +I+NGY + +L TK+++ YA+ G D
Sbjct: 65 PASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDD 124
Query: 81 VLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRA 140
+ ARK F+ MPERN+ +W MI YA+ A +F ML+ GV + FT++SALR
Sbjct: 125 LCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRV 184
Query: 141 CARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSW 200
C +R GG+ + + F + FV +AL+D+YAKC E +F+ + ++ V+W
Sbjct: 185 CGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTW 244
Query: 201 NAMIGGLAMQGFNDDSFWLFRSMM--RQGMKPDCFTLGSILRASVGGIELMKISQIHDLI 258
N++I A G +D+ LF M G++PD FT ++L + QIH +
Sbjct: 245 NSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHL 304
Query: 259 IKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEA 318
I+ + + + L+ +Y++ G + A +++ M + + S ++I G+ + + ++EA
Sbjct: 305 IRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGY-QQNGETQEA 363
Query: 319 FDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDM 378
LFK M L + D L ML+ C +++ GR++H F + + + L+DM
Sbjct: 364 LRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDM 423
Query: 379 YAKSGEIADANRAFDEM--GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGM---VP 433
YAK G + A + +D+ D+N W S++AGYA G E+ + +M + V
Sbjct: 424 YAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVL 483
Query: 434 NDVTFLSLLF-------ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
VT ++LL S G + +F +M K + ++ ++ +++ G
Sbjct: 484 TMVTIVNLLVLETALVDMYSKCGAITKARTVFDNMNGKNIV-----SWNAMISGYSKHGC 538
Query: 487 LESAYNMIRQMNIK---PTASLWSAILGACSIYGNTSLGELAARNLFDMEPE-----KSV 538
+ A + +M K P + AIL ACS +T L E R M+ + K+
Sbjct: 539 SKEALILYEEMPKKGMYPNEVTFLAILSACS---HTGLVEEGLRIFTSMQEDYNIEAKAE 595
Query: 539 NYVVLSNIYTAAGAWDNARK 558
+Y + ++ AG ++A++
Sbjct: 596 HYTCMVDLLGRAGRLEDAKE 615
>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 855
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/551 (35%), Positives = 310/551 (56%), Gaps = 3/551 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
DP T+ S+++ C +H H+I +GY+ +L +I Y + G ++ A F
Sbjct: 257 DPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVF 316
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV-RANQFTYSSALRACARMRWL 147
+ ++++SW +MI+G+ Q GY+ AL +F M R G + N+F + S AC +
Sbjct: 317 TMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEP 376
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ GR I G K N+F +L D+YAK G++ A F +IE D+VSWNA+I
Sbjct: 377 EFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAF 436
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
+ G +++ + F MM G+ PD T S+L A + + + +QIH IIK+GL+
Sbjct: 437 SDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEA 496
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKT-DIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ SL+ +Y K ++ A+ +++ + + +++S A++S + + E F LFK M+
Sbjct: 497 AVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQH-KQAGEVFRLFKLML 555
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ D++ + +L CA +ASL +G Q+H F+ K D +V N LIDMYAK G +
Sbjct: 556 FSENKPDNITITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLK 615
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A F + +++SW+SLI GYA+ G GHEA+ L++ MK+ G+ PN+VT+L +L ACS
Sbjct: 616 HARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACS 675
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
H GL EGW + M + I P EH SC+VDL AR G L A N I++M P ++W
Sbjct: 676 HIGLVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKMGFNPDITMW 735
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
+L +C +GN + E AA N+ ++P S V+LSNI+ + G W + R LM++
Sbjct: 736 KTLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASVGNWKEVARLRNLMKQM 795
Query: 567 SLRKNPGYSFL 577
++K PG S++
Sbjct: 796 GVQKVPGQSWI 806
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 155/512 (30%), Positives = 262/512 (51%), Gaps = 19/512 (3%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L+ STY +L+ C ++ + IH HI+ + + +L L ++ Y K G + ARKA
Sbjct: 155 LESSTYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKA 214
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD M RNVVSWT MISGY+QNG + +A++++ ML+SG + T+ S ++AC +
Sbjct: 215 FDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDI 274
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
GR + G + K + +L ++AL+ +Y + G I A +F I KD++SW +MI G
Sbjct: 275 DLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGF 334
Query: 208 AMQGFNDDSFWLFRSMMRQGM-KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
G+ ++ +LFR M RQG +P+ F GS+ A +E QIH + K GL +
Sbjct: 335 TQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRN 394
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
SL D+YAK+G + SA + + + D++S A+I+ F+ D EA F M+
Sbjct: 395 VFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFS-DSGDVNEAIYFFCQMM 453
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ D + +L C + ++N G QIH++ K +AAV N+L+ MY K +
Sbjct: 454 HTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLH 513
Query: 387 DANRAFDEMGDK-NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
DA F ++ + N++SW ++++ +H E L+K M P+++T ++L C
Sbjct: 514 DAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTC 573
Query: 446 S-----HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIK 500
+ G + + + ++ + R ++D++A+ G L+ A ++
Sbjct: 574 AELASLEVGNQVHCFSVKSGLVVDVSVSNR------LIDMYAKCGSLKHARDVFGSTQ-N 626
Query: 501 PTASLWSAILGACSIYGNTSLGELAARNLFDM 532
P WS+++ Y LG A NLF M
Sbjct: 627 PDIVSWSSLIVG---YAQFGLGH-EALNLFRM 654
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 211/392 (53%), Gaps = 7/392 (1%)
Query: 125 SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIED 184
S ++ TY + + AC +R L+ G+ I I K +L +++ +L++Y KCG ++D
Sbjct: 151 SSIQLESSTYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKD 210
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS-- 242
A F+ ++ ++VVSW MI G + G +D+ ++ M++ G PD T GSI++A
Sbjct: 211 ARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCI 270
Query: 243 VGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCT 302
G I+L + Q+H +IK G + +LI +Y ++G I A ++ + D+IS
Sbjct: 271 AGDIDLGR--QLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWA 328
Query: 303 ALISGFARDDNHSKEAFDLFKDMILKKM-GIDDVILCLMLNICANVASLNLGRQIHAFAF 361
++I+GF + + EA LF+DM + ++ I + + C ++ GRQIH
Sbjct: 329 SMITGFTQ-LGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCA 387
Query: 362 KYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIE 421
K+ + G +L DMYAK G + A RAF ++ +++SW ++IA ++ G +EAI
Sbjct: 388 KFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIY 447
Query: 422 LYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLF 481
+ +M H G++P+ +TFLSLL AC +G ++ + +I K + A + ++ ++
Sbjct: 448 FFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYII-KIGLDKEAAVCNSLLTMY 506
Query: 482 ARRGQLESAYNMIRQMNIKPTASLWSAILGAC 513
+ L A+N+ + ++ W+AIL AC
Sbjct: 507 TKCSNLHDAFNVFKDVSENANLVSWNAILSAC 538
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/550 (36%), Positives = 312/550 (56%), Gaps = 1/550 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T++S+L C IH ++ G ++ + +I YAK G V AR+ F
Sbjct: 128 DKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVF 187
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D M R+ VSWT + YA++GY E +L + AML+ VR ++ TY + L AC + L+
Sbjct: 188 DAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALE 247
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ I I + + ++ V +AL +Y KCG +DA +FE + +DV++WN MI G
Sbjct: 248 KGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFV 307
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G +++ F M+ +G+ PD T ++L A L + +IH K GL S +
Sbjct: 308 DSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVR 367
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+LI++Y+K GS++ A Q++ M K D++S T L+ +A D + E+F FK M+ +
Sbjct: 368 FGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYA-DCDQVVESFTTFKQMLQQ 426
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ + + +L C+N +L G++IHA K D AV NAL+ MY K G + DA
Sbjct: 427 GVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDA 486
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
R F+ M ++V++W +LI G ++G G EA++ Y+ MK EGM PN TF+++L AC
Sbjct: 487 IRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVC 546
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
L EG F M Y I+P +H++C+VD+ AR G L A ++I + +KP+A++W A
Sbjct: 547 NLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGA 606
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L AC I+ N +GE AA + +EP+ + YV LS IY AAG W + K RK M+ER +
Sbjct: 607 LLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGV 666
Query: 569 RKNPGYSFLQ 578
+K PG S+++
Sbjct: 667 KKEPGRSWIE 676
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 143/485 (29%), Positives = 256/485 (52%), Gaps = 3/485 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D Y+ LLQ C+ K +H HI+ G + N++++ ++ YA G V AR+
Sbjct: 26 VDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQL 85
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD+ ++VVSW MISGYA G + A +F+ M + + ++FT+ S L AC+ L
Sbjct: 86 FDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVL 145
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
GR I + + + V +AL+ +YAKCG + DA +F+ + +D VSW + G
Sbjct: 146 NWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAY 205
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A G+ ++S + +M+++ ++P T ++L A L K QIH I++ S
Sbjct: 206 AESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDV 265
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+++ +L +Y K G+ + A +++ + D+I+ +I GF D +EA F M+
Sbjct: 266 RVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFV-DSGQLEEAHGTFHRMLE 324
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ + D +L+ CA L G++IHA A K D GNALI+MY+K+G + D
Sbjct: 325 EGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKD 384
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A + FD M ++V+SWT+L+ YA E+ +K+M +G+ N +T++ +L ACS+
Sbjct: 385 ARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSN 444
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
G E+ +++ K +L + ++ ++ + G +E A + M+++ + W+
Sbjct: 445 PVALKWGKEIHAEVV-KAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVT-WN 502
Query: 508 AILGA 512
++G
Sbjct: 503 TLIGG 507
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 205/394 (52%), Gaps = 3/394 (0%)
Query: 118 VFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYA 177
V + R G + + + Y L++C + + L G+ + I + N+++ + LL LYA
Sbjct: 15 VLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYA 74
Query: 178 KCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGS 237
CG + +A LF++ K VVSWN MI G A +G ++F LF M ++ ++PD FT S
Sbjct: 75 HCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVS 134
Query: 238 ILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
IL A L +IH +++ GL + + +LI +YAK GS+R A +++ +M D
Sbjct: 135 ILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRD 194
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
+S T L +A + + +E+ + M+ +++ + +L+ C ++A+L G+QIH
Sbjct: 195 EVSWTTLTGAYA-ESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIH 253
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
A + + D V AL MY K G DA F+ + ++VI+W ++I G+ G
Sbjct: 254 AHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLE 313
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
EA + +M EG+ P+ T+ ++L AC+ G G E+ K ++ + +
Sbjct: 314 EAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAA-KDGLVSDVRFGNAL 372
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
++++++ G ++ A + +M + S W+ +LG
Sbjct: 373 INMYSKAGSMKDARQVFDRMPKRDVVS-WTTLLG 405
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 114/244 (46%), Gaps = 6/244 (2%)
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMY 379
D+ + + K +D +L C L +G+Q+H + + + N L+ +Y
Sbjct: 14 DVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLY 73
Query: 380 AKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFL 439
A G + +A + FD+ +K+V+SW +I+GYA G EA L+ M+ E + P+ TF+
Sbjct: 74 AHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFV 133
Query: 440 SLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
S+L ACS + G E+ ++ + + ++ ++A+ G + A + M
Sbjct: 134 SILSACSSPAVLNWGREIHVRVMEA-GLANDTTVGNALISMYAKCGSVRDARRVFDAMAS 192
Query: 500 KPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEK-SVNYVVLSNIYTAAGAWDNARK 558
+ S W+ + GA Y + GE + + M E+ + + N+ +A G+ K
Sbjct: 193 RDEVS-WTTLTGA---YAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEK 248
Query: 559 TRKL 562
+++
Sbjct: 249 GKQI 252
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/555 (34%), Positives = 317/555 (57%), Gaps = 1/555 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T +++ C D K + LIH + G + + + ++ Y K ++ AR F
Sbjct: 29 DNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLF 88
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D+M ER++V+WT MI GYA+ G +L++F M GV ++ + + ACA++ +
Sbjct: 89 DKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMH 148
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
R+I IQ+ +F ++ + +A++D+YAKCG +E A +F+R+E K+V+SW+AMI
Sbjct: 149 KARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYG 208
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G + LFR M+ GM PD TL S+L A L IH ++ K GL+ +
Sbjct: 209 YHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHF 268
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +L+D+Y K I A L+ M + D+++ T +I G+A N + E+ LF M +
Sbjct: 269 VCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGN-ANESLVLFDKMREE 327
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ D V + ++ CA + +++ R I + + + D +G A+IDM+AK G + A
Sbjct: 328 GVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESA 387
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
FD M +KNVISW+++IA Y HG G +A++L+ M G++PN +T +SLL+ACSH
Sbjct: 388 REIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHA 447
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
GL EG F+ M Y + +H++CVVDL R G+L+ A +I M ++ LW A
Sbjct: 448 GLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGA 507
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
LGAC + + L E AA +L +++P+ +Y++LSNIY AG W++ KTR LM +R L
Sbjct: 508 FLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRL 567
Query: 569 RKNPGYSFLQSSKKN 583
+K PG+++++ K+
Sbjct: 568 KKIPGWTWIEVDNKS 582
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 141/431 (32%), Positives = 238/431 (55%), Gaps = 7/431 (1%)
Query: 102 MISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGR 161
M+ G+A+ G N F ++R G R + +T +RAC ++ LQ GR+I + K
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 162 FVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFR 221
+ FV +AL+D+Y KC IEDA LF++++ +D+V+W MIGG A G ++S LF
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 222 SMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYG 281
M +G+ PD + +++ A + K I D I + + L ++ID+YAK G
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180
Query: 282 SIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLML 341
+ SA +++ M + ++IS +A+I+ + ++A DLF+ M+ M D + L +L
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGY-HGQGRKALDLFRMMLSSGMLPDKITLASLL 239
Query: 342 NICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVI 401
C+++ +L +GR IH +K+ D V AL+DMY K EI DA FD+M +++++
Sbjct: 240 YACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLV 299
Query: 402 SWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM 461
+WT +I GYA+ G +E++ L+ KM+ EG+VP+ V ++++FAC+ G + D
Sbjct: 300 TWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKA-RTIDDY 358
Query: 462 INKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSL 521
I + + + ++D+ A+ G +ESA + +M K S WSA++ A YG
Sbjct: 359 IQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVIS-WSAMIAA---YGYHGQ 414
Query: 522 GELAARNLFDM 532
G A +LF M
Sbjct: 415 GR-KALDLFPM 424
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 150/286 (52%), Gaps = 3/286 (1%)
Query: 11 GQLKQALK-FSLSCPDTLL-DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLS 68
GQ ++AL F + +L D T SLL C D K + LIH + G + + +
Sbjct: 211 GQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVC 270
Query: 69 TKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR 128
++ Y K ++ AR FD+MPER++V+WT MI GYA+ G +L++F M GV
Sbjct: 271 AALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVV 330
Query: 129 ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWIL 188
++ + + ACA++ + R I IQ+ +F ++ + +A++D++AKCG +E A +
Sbjct: 331 PDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREI 390
Query: 189 FERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIE 247
F+R+E K+V+SW+AMI G + LF M+R G+ P+ TL S+L A S G+
Sbjct: 391 FDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLV 450
Query: 248 LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ + + + K ++D+ + G + A +L SM
Sbjct: 451 EEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESM 496
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/565 (36%), Positives = 309/565 (54%), Gaps = 11/565 (1%)
Query: 18 KFSLSC--PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFY 75
K L C PD + T SLL C A + +H+++I G S+L + ++ Y
Sbjct: 304 KMQLDCMKPDCV----TVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLY 359
Query: 76 AKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYS 135
K D+ +A + F NVV W M+ Y Q G + +F M G+ NQ+TY
Sbjct: 360 VKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYP 419
Query: 136 SALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERK 195
S LR C + L G I + K F N++V S L+D+YAK G ++ A + +R+ +
Sbjct: 420 SILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREE 479
Query: 196 DVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIH 255
DVVSW AMI G ++ LF+ M QG++ D S + A G L + QIH
Sbjct: 480 DVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIH 539
Query: 256 DLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHS 315
G + +L+ +YA+ G + AY + + D IS ALISGFA+ H
Sbjct: 540 AQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQS-GHC 598
Query: 316 KEAFDLFKDMILKKMGIDDVILCL--MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN 373
+EA +F M + G++ + ++ AN A++ G+QIHA K + N
Sbjct: 599 EEALQVFSQM--NQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASN 656
Query: 374 ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP 433
LI +Y+K G I DA R F EM +KNV+SW ++I GY++HGYG EA+ L+++MK G++P
Sbjct: 657 VLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMP 716
Query: 434 NDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNM 493
N VTF+ +L ACSH GL EG F M ++ ++P+ EH+ CVVDL R L A
Sbjct: 717 NHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREF 776
Query: 494 IRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAW 553
I +M I+P A +W +L AC+++ N +GE AAR+L ++EPE S YV+LSN+Y +G W
Sbjct: 777 IEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKW 836
Query: 554 DNARKTRKLMEERSLRKNPGYSFLQ 578
D +TR++M++R ++K PG S+++
Sbjct: 837 DYRDRTRQMMKDRGVKKEPGRSWIE 861
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 159/505 (31%), Positives = 279/505 (55%), Gaps = 11/505 (2%)
Query: 19 FSLSCPDTLL-DPSTYMSLLQFCIDKKAERQ-AHLIHAHIITNGYESNLHLSTKVIIFYA 76
FSL + + D ST+ S+L+ C KA Q IHA II +G+ S+ + +I Y+
Sbjct: 99 FSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYS 158
Query: 77 KVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSS 136
K G V A+ F+R+ ++ VSW AMISG +QNG ++ A+L+F M +S V + +SS
Sbjct: 159 KNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSS 218
Query: 137 ALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKD 196
L AC ++ + G + G I K FV +AL+ LY++ G + A +F ++ R+D
Sbjct: 219 VLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRD 278
Query: 197 VVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHD 256
+S+N++I GLA +GF+D + LF M MKPDC T+ S+L A K Q+H
Sbjct: 279 RISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHS 338
Query: 257 LIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSK 316
+IK+G+ S + GSL+D+Y K I +A++ + + +++ ++ + + N S
Sbjct: 339 YVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLS- 397
Query: 317 EAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALI 376
E++ +F M ++ + + +L C ++ +L+LG QIH K ++ V + LI
Sbjct: 398 ESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLI 457
Query: 377 DMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDV 436
DMYAK GE+ A + +++V+SWT++IAGY +H EA++L+++M+++G+ +++
Sbjct: 458 DMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNI 517
Query: 437 TFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFS---CVVDLFARRGQLESAYNM 493
F S + AC+ +G ++ + I +E S +V L+AR G+ + AY
Sbjct: 518 GFSSAISACAGIQALNQGQQIHA----QSYISGYSEDLSIGNALVSLYARCGRAQDAYLA 573
Query: 494 IRQMNIKPTASLWSAILGACSIYGN 518
+++ K S W+A++ + G+
Sbjct: 574 FEKIDAKDNIS-WNALISGFAQSGH 597
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 150/483 (31%), Positives = 258/483 (53%), Gaps = 6/483 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
TY+ L + C + + A +HA I +G++ L +++I Y G+V +A K FD +
Sbjct: 12 TYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDI 71
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW-LQGG 150
P NV W +ISG L +FS M+ V ++ T++S LRAC+ + Q
Sbjct: 72 PSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVT 131
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
I I F + V + L+DLY+K G ++ A ++FER+ KD VSW AMI GL+
Sbjct: 132 EQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQN 191
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI-SQIHDLIIKLGLESSNKL 269
G D++ LF M + + P + S+L A IEL K+ Q+H I+K GL S +
Sbjct: 192 GREDEAILLFCQMHKSAVIPTPYVFSSVLSACT-KIELFKLGEQLHGFIVKWGLSSETFV 250
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+L+ +Y+++G++ +A Q++ M + D IS +LISG A+ S A LF+ M L
Sbjct: 251 CNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQ-RGFSDRALQLFEKMQLDC 309
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
M D V + +L+ CA+V + G+Q+H++ K S D + +L+D+Y K +I A+
Sbjct: 310 MKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAH 369
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
F +NV+ W ++ Y + G E+ ++ +M+ EG++PN T+ S+L C+ G
Sbjct: 370 EYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLG 429
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
G ++ T +I K S ++D++A+ G+L++A +++++ + S W+A+
Sbjct: 430 ALDLGEQIHTQVI-KSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVS-WTAM 487
Query: 510 LGA 512
+
Sbjct: 488 IAG 490
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 135/483 (27%), Positives = 224/483 (46%), Gaps = 38/483 (7%)
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
M G+RAN TY C L + + I K F + S L+D+Y G
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
+++A LF+ I +V WN +I GL + LF M+ + + PD T S+LRA
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 242 SVGGIELMKIS-QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
GG +++ QIH II G SS + LID+Y+K G + A ++ + D +S
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
A+ISG ++ + EA LF M + + +L+ C + LG Q+H F
Sbjct: 181 WVAMISGLSQ-NGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFI 239
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
K+ S + V NAL+ +Y++ G + A + F +M ++ IS+ SLI+G A+ G+ A+
Sbjct: 240 VKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRAL 299
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI------------------ 462
+L++KM+ + M P+ VT SLL AC+ G +G +L + +I
Sbjct: 300 QLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLY 359
Query: 463 ---------NKYRILPRAEH---FSCVVDLFARRGQLESAYNMIRQMNIK---PTASLWS 507
++Y + E+ ++ ++ + + G L +Y + QM I+ P +
Sbjct: 360 VKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYP 419
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYV--VLSNIYTAAGAWDNARKTRKLMEE 565
+IL C+ G LGE + + +V YV VL ++Y G D AR + + E
Sbjct: 420 SILRTCTSLGALDLGEQIHTQVIKSGFQFNV-YVCSVLIDMYAKHGELDTARGILQRLRE 478
Query: 566 RSL 568
+
Sbjct: 479 EDV 481
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/564 (35%), Positives = 336/564 (59%), Gaps = 7/564 (1%)
Query: 22 SCPDTLLDP--STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVG 79
S P L P ++ S+L+ D K +Q IHA IIT+G N LS ++ Y G
Sbjct: 14 SNPTQRLCPLAQSHASILRKLKDLKPLQQ---IHAQIITSGLTHNTFLSNSLMNAYVYCG 70
Query: 80 DVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALR 139
+ A++ F P +NVVSWT +ISG A+N A+ VF M + N T SS L
Sbjct: 71 LLADAKQIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLP 130
Query: 140 ACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS 199
A A + ++ + + +G F N+FV++AL+D+Y+K G + A LFE + ++VVS
Sbjct: 131 AFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVS 190
Query: 200 WNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLII 259
WNA++ G + GF++++ LF M R+G+ D +T+ S++ AS+ L + IH II
Sbjct: 191 WNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFII 250
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
+ G E+ + +L+D+Y + + A++++ M D+ + T +++GF+ H A
Sbjct: 251 RTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFS-SGRHWDRAI 309
Query: 320 DLFKDMI-LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDM 378
F M+ ++ + +D ++L +L+ C++ +L GR++HA A K + + VG+A+IDM
Sbjct: 310 KHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDM 369
Query: 379 YAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTF 438
YA G + DA R F MG+K+V+ W ++IAG +GYG +AI+L+ +MK G+ P++ TF
Sbjct: 370 YANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTF 429
Query: 439 LSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMN 498
+S+L+ACSH G+ EG ++F M+ +P +H++CV+D+ R GQL++AY+ I M
Sbjct: 430 VSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMP 489
Query: 499 IKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARK 558
+P ++S +LGAC I+GN LG ++ +F+MEP + YV+LSN+Y AG W+ +
Sbjct: 490 FQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKM 549
Query: 559 TRKLMEERSLRKNPGYSFLQSSKK 582
TR + + L+K+PG+S ++ +++
Sbjct: 550 TRASLRSKRLKKDPGFSSIEINQE 573
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/584 (35%), Positives = 333/584 (57%), Gaps = 8/584 (1%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLD--PSTYM---SLLQFCIDKKAERQAHLIHAHI 56
N ++F G + Q ++ SLS + L P T + +LLQ + K+ +Q +HAH+
Sbjct: 26 NSFTSHFSQGDVAQMVERSLSMREHPLQQYPLTSLQCGALLQSFTNTKSFKQGQQLHAHM 85
Query: 57 IT-NGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENA 115
I+ + E+N +L+TK+ FYA G + A FD + +N W MI GYA NG +
Sbjct: 86 ISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKS 145
Query: 116 LLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDL 175
L+++ ML G RA+ FTY L+AC + ++ GR + + +++V ++LL +
Sbjct: 146 LVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAM 205
Query: 176 YAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTL 235
YAK G + A ++F+R+ +D+ SWN MI G A + +F +F M + G+ DC TL
Sbjct: 206 YAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTL 265
Query: 236 GSILRASVGGIELMKISQIHDLIIKLGLESSNKL-TGSLIDVYAKYGSIRSAYQLYRSML 294
+L A + + IH ++ + + NK T SLI++Y + A +L+ +
Sbjct: 266 LGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVR 325
Query: 295 KTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGR 354
D +S ++I G+AR+ + + E+ LF+ M L G D V +L C +A+L G
Sbjct: 326 WKDTVSWNSMILGYARNGD-AFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGM 384
Query: 355 QIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG 414
IH++ K + VG AL+DMY+K G +A + R FDEM DK+++SW++++AGY HG
Sbjct: 385 SIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHG 444
Query: 415 YGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF 474
G EAI + MK ++P++ F S+L ACSH GL EG E+F M +Y + P H+
Sbjct: 445 RGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHY 504
Query: 475 SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEP 534
SC+VDL R G L+ AY +IR M IKPT+ +W+A+L A ++ N L E++A+ +FDM P
Sbjct: 505 SCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNP 564
Query: 535 EKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+ +Y+ LSNIY A WD+ + R ++ + L+K+PG SF++
Sbjct: 565 KVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIE 608
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/564 (34%), Positives = 336/564 (59%), Gaps = 7/564 (1%)
Query: 22 SCPDTLLDP--STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVG 79
S P L P + S+L+ D K +Q IHA IIT+G N LS ++ Y G
Sbjct: 14 SNPTQRLSPLAQPHASILRKLKDLKPLQQ---IHAQIITSGLTHNTFLSNSLMNAYVYCG 70
Query: 80 DVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALR 139
+ A++ F P +NVVSWT +ISG A+N A+ VF M+ + N T SS L
Sbjct: 71 LLADAKQIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLP 130
Query: 140 ACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS 199
A A + ++ + + +G F N+FV++AL+D+Y+K G + A LFE + ++VV+
Sbjct: 131 AFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVT 190
Query: 200 WNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLII 259
WNA++ G + GF++++ LF M R+G+ D +T+ S++ AS+ L + IH II
Sbjct: 191 WNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFII 250
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
+ G E+ + +L+D+Y + + A++++ M D+ + T +++GF+ H A
Sbjct: 251 RTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFS-SGRHWDRAI 309
Query: 320 DLFKDMI-LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDM 378
F M+ ++ + +D + L +L+ C++ +L GR++HA A K + + VG+A+IDM
Sbjct: 310 KHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDM 369
Query: 379 YAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTF 438
YA G + DA R F MG+K+V+ W ++IAG +GYG +AI+L+ +MK G+ P++ TF
Sbjct: 370 YANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTF 429
Query: 439 LSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMN 498
+S+L+ACSH G+ EG ++F M+ ++P +H++CV+D+ R GQL++AY+ I M
Sbjct: 430 VSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMP 489
Query: 499 IKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARK 558
+P ++S +LGAC I+GN LG ++ +F+MEP + YV+LSN+Y AG W+ +
Sbjct: 490 FQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKM 549
Query: 559 TRKLMEERSLRKNPGYSFLQSSKK 582
TR + + ++K+PG+S ++ +++
Sbjct: 550 TRASLRSKRMKKDPGFSSIEINQE 573
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 214/572 (37%), Positives = 329/572 (57%), Gaps = 4/572 (0%)
Query: 9 KTGQLKQALKFSLS--CPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K L AL F L C + L Y LLQ C + ++ IH IITNG+ESNL
Sbjct: 122 KNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLF 181
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ T V+ YAK + +A K F+RM +++VSWT +++GYAQNG+ + AL + M +G
Sbjct: 182 VMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAG 241
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
+ + T S L A A M+ L+ GR I G + F + V +ALLD+Y KCG A
Sbjct: 242 QKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIAR 301
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
++F+ + K VVSWN MI G A G ++++F F M+ +G P T+ +L A
Sbjct: 302 LVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLG 361
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
+L + +H L+ KL L+S+ + SLI +Y+K + A ++ ++ KT++ + A+I
Sbjct: 362 DLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNV-TWNAMIL 420
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
G+A++ KEA +LF M + + +D L ++ A+ + + IH A +
Sbjct: 421 GYAQN-GCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMD 479
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
+ V AL+DMYAK G I A + FD M +++VI+W ++I GY HG G E ++L+ +M
Sbjct: 480 NNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEM 539
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
+ + PND+TFLS++ ACSH+G EG LF M Y + P +H+S +VDL R GQ
Sbjct: 540 QKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQ 599
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
L+ A+N I++M IKP S+ A+LGAC I+ N LGE AA+ LF ++P++ +V+L+NI
Sbjct: 600 LDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANI 659
Query: 547 YTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
Y + WD K R ME++ L K PG S+++
Sbjct: 660 YASNSMWDKVAKVRTAMEDKGLHKTPGCSWVE 691
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 150/494 (30%), Positives = 246/494 (49%), Gaps = 22/494 (4%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
LL+ C KK Q I II NG+ + TKVI + K G A + F+ + +
Sbjct: 53 LLENCTSKKELYQ---ILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKL 109
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG 155
V + M+ GYA+N +AL F M+ VR Y+ L+ C L+ GR I G
Sbjct: 110 DVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHG 169
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD 215
I F NLFV +A++ LYAKC I++A+ +FER++ KD+VSW ++ G A G
Sbjct: 170 LIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKR 229
Query: 216 SFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKLTGSLI 274
+ L M G KPD TL SIL A V ++ ++I + IH + G ES +T +L+
Sbjct: 230 ALQLVLQMQEAGQKPDSVTLVSILPA-VADMKALRIGRSIHGYAFRSGFESLVNVTNALL 288
Query: 275 DVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD 334
D+Y K GS R A +++ M ++S +I G A+ + S+EAF F M+ +
Sbjct: 289 DMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQ-NGESEEAFATFLKMLDEGEVPTR 347
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE 394
V + +L CAN+ L G +H K + + +V N+LI MY+K + A F+
Sbjct: 348 VTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNN 407
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL-----FACSHTG 449
+ NV +W ++I GYA++G EA+ L+ M+ +G+ + T + ++ F+ +
Sbjct: 408 LEKTNV-TWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQA 466
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
G + M N + + +VD++A+ G +++A + M + + W+A+
Sbjct: 467 KWIHGLAVRACMDNNVFV------STALVDMYAKCGAIKTARKLFDMMQERHVIT-WNAM 519
Query: 510 LGACSIYGNTSLGE 523
+ YG +G+
Sbjct: 520 IDG---YGTHGVGK 530
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/576 (35%), Positives = 320/576 (55%), Gaps = 3/576 (0%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K G+LK+AL ++ T + + LLQ C ++ Q +HA I+ +G + N +
Sbjct: 73 KQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRY 132
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
L ++ YAK G + AR+ FD + +RN+VSWTAMI + + A + M +G
Sbjct: 133 LENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAG 192
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
+ ++ T+ S L A LQ G+ + I K V ++L+ +YAKCG I A
Sbjct: 193 CKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQ 252
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
++F+++ K+VV+W +I G A QG D + L M + + P+ T SIL+ +
Sbjct: 253 VIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPL 312
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
L ++H II+ G + +LI +Y K G ++ A +L+ + D+++ TA+++
Sbjct: 313 ALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVT 372
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
G+A+ H EA DLF+ M + + D + L C++ A L G+ IH S
Sbjct: 373 GYAQLGFHD-EAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYS 431
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
D + +AL+ MYAK G + DA F++M ++NV++WT++I G A+HG EA+E +++M
Sbjct: 432 LDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQM 491
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
K +G+ P+ VTF S+L AC+H GL EG + F M Y I P EH+SC VDL R G
Sbjct: 492 KKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGH 551
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
LE A N+I M +P S+W A+L AC I+ + GE AA N+ ++P+ YV LSNI
Sbjct: 552 LEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNI 611
Query: 547 YTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
Y AAG +++A K R++ME+R + K PG S+++ K
Sbjct: 612 YAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGK 647
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 139/510 (27%), Positives = 261/510 (51%), Gaps = 20/510 (3%)
Query: 56 IITNGYESNL----HLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
++ N Y+SN+ L+T + D L F ++ + ++ + +S + G
Sbjct: 25 LMFNRYQSNVDTAFELTTPTVSH-----DQLPGNAGFRKV---DTLANSGDVSILCKQGR 76
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ AL + + M+ G R + L+ CAR+R L+ GR + +I K N ++++
Sbjct: 77 LKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENT 136
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
LL +YAKCG + DA +F+ I +++VSW AMI N +++ + +M G KPD
Sbjct: 137 LLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPD 196
Query: 232 CFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
T S+L A EL+++ Q +H I K GLE ++ SL+ +YAK G I A ++
Sbjct: 197 KVTFVSLLNAFTNP-ELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIF 255
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
+ + ++++ T LI+G+A+ A +L + M ++ + + +L C +L
Sbjct: 256 DKLPEKNVVTWTLLIAGYAQ-QGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLAL 314
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
G+++H + + + V NALI MY K G + +A + F ++ ++V++WT+++ GY
Sbjct: 315 EHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGY 374
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
A+ G+ EAI+L+++M+ +G+ P+ +TF S L +CS EG + +++ L
Sbjct: 375 AQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDV 434
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNT--SLGELAARN 528
S +V ++A+ G ++ A + QM+ + + W+A++ C+ +G +L
Sbjct: 435 YLQ-SALVSMYAKCGSMDDARLVFNQMSERNVVA-WTAMITGCAQHGRCREALEYFEQMK 492
Query: 529 LFDMEPEKSVNYVVLSNIYTAAGAWDNARK 558
++P+K VLS T G + RK
Sbjct: 493 KQGIKPDKVTFTSVLSAC-THVGLVEEGRK 521
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/605 (32%), Positives = 335/605 (55%), Gaps = 40/605 (6%)
Query: 25 DTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVL 82
D ++P+ T++S+L+ C + + IH + G E+++ ++T +I Y+K G++
Sbjct: 150 DANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEIS 209
Query: 83 SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA 142
A + F +M ERNVVSWTA+I AQ+ A ++ ML++G+ N T+ S L +C
Sbjct: 210 VACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCN 269
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
L GR I I + ++ V +AL+ +Y KC +++A +F+R+ ++DV+SW+A
Sbjct: 270 TPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSA 329
Query: 203 MIGGLAMQGFND-----DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDL 257
MI G A G+ D + F L M R+G+ P+ T SILRA L + QIH
Sbjct: 330 MIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAE 389
Query: 258 IIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTA-------------- 303
+ K+G E L ++ ++YAK GSI A Q++ M ++++ T+
Sbjct: 390 LSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSA 449
Query: 304 -----------------LISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICAN 346
+I+G+A++ + K F+L M + D V + +L C
Sbjct: 450 EKVFSEMPTRNVVSWNLMIAGYAQNGDIVK-VFELLSSMKAEGFQPDRVTVITILEACGA 508
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
+A L G+ +HA A K D V +LI MY+K G++A+A FD+M +++ ++W ++
Sbjct: 509 LAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAM 568
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYR 466
+AGY +HG G EA++L+K+M E + PN++T +++ ACS GL EG E+F M ++
Sbjct: 569 LAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFK 628
Query: 467 ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAA 526
+ PR +H+ C+VDL R G+L+ A I+ M +P S+W A+LGAC + N L E AA
Sbjct: 629 MTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAA 688
Query: 527 RNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ-SSKKNIL 585
++ ++EP + Y+ LSNIY AG WD++ K R++M++R L+K+ G S ++ + +
Sbjct: 689 HHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTF 748
Query: 586 LLEPC 590
+ E C
Sbjct: 749 VAEDC 753
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 169/599 (28%), Positives = 299/599 (49%), Gaps = 48/599 (8%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K G+L++A++ + L++ +TY +++ C + ++H + G E +++
Sbjct: 33 KAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIY 92
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
L +I FY+K DV SA + F RM R+VV+W++MI+ YA N + A F M +
Sbjct: 93 LGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDAN 152
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
+ N+ T+ S L+AC L+ GR I ++ ++ V +AL+ +Y+KCG I A
Sbjct: 153 IEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVAC 212
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+F ++ ++VVSW A+I A +++F L+ M++ G+ P+ T S+L +
Sbjct: 213 EVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPE 272
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
L + +IH I + GLE+ + +LI +Y K S++ A +++ M K D+IS +A+I+
Sbjct: 273 ALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIA 332
Query: 307 GFA----RDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK 362
G+A +D E F L + M + + + V +L C +L GRQIHA K
Sbjct: 333 GYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSK 392
Query: 363 YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS----------------- 405
D ++ A+ +MYAK G I +A + F +M +KNV++WTS
Sbjct: 393 VGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKV 452
Query: 406 --------------LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLT 451
+IAGYA++G + EL MK EG P+ VT +++L AC
Sbjct: 453 FSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGL 512
Query: 452 CEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
G + + + K + + ++ ++++ GQ+ A + +M+ + T + W+A+L
Sbjct: 513 ERGKLVHAEAV-KLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVA-WNAMLA 570
Query: 512 ACSIYGNTSLGELAARNLFD--MEPEKSVNYVVLSNIYTA---AGAWDNARKTRKLMEE 565
YG G L A +LF ++ S N + L+ + +A AG R+ ++M+E
Sbjct: 571 G---YGQHGDG-LEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQE 625
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/605 (33%), Positives = 336/605 (55%), Gaps = 40/605 (6%)
Query: 25 DTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVL 82
D ++P+ T++S+L+ C + +A IH + +G E+++ ++T +I Y+K G++
Sbjct: 172 DANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEIS 231
Query: 83 SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA 142
A + F +M ERNVVSWTA+I AQ+ A ++ ML++G+ N T+ S L +C
Sbjct: 232 LACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCN 291
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
L GR I I + ++ V +AL+ +Y KC I+DA F+R+ ++DV+SW+A
Sbjct: 292 TPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSA 351
Query: 203 MIGGLAMQGFND-----DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDL 257
MI G A G+ D + F L M R+G+ P+ T SIL+A L + QIH
Sbjct: 352 MIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAE 411
Query: 258 IIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL------------- 304
I K+G ES L ++ ++YAK GSI A Q++ M ++++ +L
Sbjct: 412 ISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSA 471
Query: 305 ------------------ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICAN 346
I+G+A+ + +K F+L M ++ D V + +L C
Sbjct: 472 EKVFSEMSTRNVVSWNLMIAGYAQSGDIAK-VFELLSSMKVEGFQPDRVTIISILEACGA 530
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
+++L G+ +HA A K D V +LI MY+K GE+ +A FD++ +++ ++W ++
Sbjct: 531 LSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAM 590
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYR 466
+AGY +HG G EA++L+K+M E + PN++TF +++ AC GL EG E+F M +R
Sbjct: 591 LAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFR 650
Query: 467 ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAA 526
+ P +H+ C+VDL R G+L+ A I++M +P S+W A+LGAC + N L E AA
Sbjct: 651 MKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAA 710
Query: 527 RNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ-SSKKNIL 585
++ +EP + YV LSNIY AG WD++ K RK+M+++ L+K+ G S ++ + +
Sbjct: 711 HHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRIHTF 770
Query: 586 LLEPC 590
+ E C
Sbjct: 771 VAEDC 775
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 165/606 (27%), Positives = 298/606 (49%), Gaps = 47/606 (7%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K G+LK+A++ + L++ +TY +++ C + ++H + G +++
Sbjct: 55 KAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIY 114
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
L +I FY+K GDV S + F RM R+VV+W++MI+ YA N + A F M +
Sbjct: 115 LGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDAN 174
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
+ N+ T+ S L+AC L+ R I ++ ++ V +AL+ +Y+KCG I A
Sbjct: 175 IEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLAC 234
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+F++++ ++VVSW A+I A +++F L+ M++ G+ P+ T S+L +
Sbjct: 235 EIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPE 294
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
L + +IH I + GLE+ + +LI +Y K I+ A + + M K D+IS +A+I+
Sbjct: 295 ALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIA 354
Query: 307 GFARDDNHSKEAFDLFKDMI--LKKMGI--DDVILCLMLNICANVASLNLGRQIHAFAFK 362
G+A+ KE+ D ++ +++ G+ + V +L C+ +L GRQIHA K
Sbjct: 355 GYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISK 414
Query: 363 YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL---------------- 406
D ++ A+ +MYAK G I +A + F +M +KNV++W SL
Sbjct: 415 VGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKV 474
Query: 407 ---------------IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLT 451
IAGYA+ G + EL MK EG P+ VT +S+L AC
Sbjct: 475 FSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSAL 534
Query: 452 CEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
G + + + K + + ++ ++++ G++ A + +++ + T + W+A+L
Sbjct: 535 ERGKLVHAEAV-KLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVA-WNAMLA 592
Query: 512 ACSIYGNTSLG----ELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
YG +G +L R L + P + + + + AG R+ ++M+E
Sbjct: 593 G---YGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQE-D 648
Query: 568 LRKNPG 573
R PG
Sbjct: 649 FRMKPG 654
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/578 (36%), Positives = 322/578 (55%), Gaps = 10/578 (1%)
Query: 6 ANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFC--IDKKAERQAHLIHAHIITNGYES 63
A GQ +L + L + +TY+S+L A +H H G+ S
Sbjct: 208 AQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFIS 267
Query: 64 NLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML 123
+L + +I YAK G + AR FD M +R+V+SW AMI G AQNG A +F M
Sbjct: 268 DLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQ 327
Query: 124 RSGVRANQFTYSSALR---ACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
+ G + TY S L + W++ + + +++ G V +L V SA + +Y +CG
Sbjct: 328 QEGFVPDSTTYLSLLNTHVSTGAWEWVK--EVHKHAVEVG-LVSDLRVGSAFVHMYIRCG 384
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
I+DA ++F+++ ++V +WNAMIGG+A Q ++ LF M R+G PD T +IL
Sbjct: 385 SIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILS 444
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
A+VG L + ++H I GL ++ +L+ +YAK G+ A Q++ M++ ++ +
Sbjct: 445 ANVGEEALEWVKEVHSYAIDAGL-VDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTT 503
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
T +ISG A+ EAF LF M+ + + D +L+ CA+ +L +++H+ A
Sbjct: 504 WTVMISGLAQH-GCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHA 562
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
D VGNAL+ MYAK G + DA R FD+M +++V SWT +I G A+HG G +A+
Sbjct: 563 VNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDAL 622
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDL 480
+L+ KMK EG PN +F+++L ACSH GL EG F + Y I P EH++C+VDL
Sbjct: 623 DLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDL 682
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNY 540
R GQLE A + I M I+P + W A+LGAC YGN + E AA+ ++P+ + Y
Sbjct: 683 LGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTY 742
Query: 541 VVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
V+LSNIY A G W+ R +M+ R +RK PG S+++
Sbjct: 743 VLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIE 780
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 175/587 (29%), Positives = 278/587 (47%), Gaps = 66/587 (11%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
TY+S+L+ C + + IHAHII +G++S++ + T ++ Y K G + A+ FD+M
Sbjct: 32 TYLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQLIFDKM 91
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
ERNV+SWT MI G A G + A F M R G N +TY S L A A L+ +
Sbjct: 92 VERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWVK 151
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ +L V +AL+ +YAK G I+DA ++F+ + +D+ SW MIGGLA G
Sbjct: 152 EVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHG 211
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRA----SVGGIELMKISQIHDLIIKLGLESSN 267
++F LF M R G P+ T SIL A S G +E +K ++H K G S
Sbjct: 212 RGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVK--EVHKHAGKAGFISDL 269
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
++ +LI +YAK GSI A ++ M D+IS A+I G A+ + EAF +F M
Sbjct: 270 RVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQ-NGCGHEAFTIFLKMQQ 328
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ D +LN + + +++H A + D VG+A + MY + G I D
Sbjct: 329 EGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDD 388
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA--- 444
A FD++ +NV +W ++I G A+ G EA+ L+ +M+ EG P+ TF+++L A
Sbjct: 389 AQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVG 448
Query: 445 -------------------------------CSHTGLTCEGWELFTDMINKYRILPRAEH 473
+ G T ++F DM+ +
Sbjct: 449 EEALEWVKEVHSYAIDAGLVDLRVGNALVHMYAKCGNTMYAKQVFDDMVER-----NVTT 503
Query: 474 FSCVVDLFARRGQLESAYNMIRQM---NIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
++ ++ A+ G A+++ QM I P A+ + +IL AC+ G A
Sbjct: 504 WTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTG--------ALEWV 555
Query: 531 DMEPEKSVNYVVLSNI---------YTAAGAWDNARKTRKLMEERSL 568
+VN ++S++ Y G+ D+AR+ M ER +
Sbjct: 556 KEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDV 602
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 145/419 (34%), Positives = 234/419 (55%), Gaps = 13/419 (3%)
Query: 102 MISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGR 161
MI GYA+ GY E+A+ V+S M R G + N+ TY S L+AC L+ G+ I I +
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 162 FVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFR 221
F ++ V++AL+++Y KCG I+DA ++F+++ ++V+SW MIGGLA G ++F F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 222 SMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYG 281
M R+G P+ +T SIL A+ L + ++H + GL ++ +L+ +YAK G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180
Query: 282 SIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLML 341
SI A ++ M++ DI S T +I G A+ +EAF LF M + +L
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQ-HGRGQEAFSLFLQMERGGCLPNLTTYLSIL 239
Query: 342 NICA--NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN 399
N A + +L +++H A K D VGNALI MYAK G I DA FD M D++
Sbjct: 240 NASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRD 299
Query: 400 VISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFT 459
VISW ++I G A++G GHEA ++ KM+ EG VP+ T+LSLL +T ++ WE
Sbjct: 300 VISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLL----NTHVSTGAWEWVK 355
Query: 460 DMINKYRI----LPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACS 514
+ ++K+ + + S V ++ R G ++ A + ++ ++ + W+A++G +
Sbjct: 356 E-VHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVR-NVTTWNAMIGGVA 412
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/535 (36%), Positives = 315/535 (58%), Gaps = 5/535 (0%)
Query: 46 ERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISG 105
++ L+HAH I +GY SN+ + + ++ Y K V+ ARK FD MPER+ V W MI+G
Sbjct: 124 DKHLMLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMING 183
Query: 106 YAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVEN 165
+N ++++ +F M+ GVR + T ++ L A A ++ L+ G IQ K F
Sbjct: 184 LVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFC 243
Query: 166 LFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR 225
+V + L+ LY+KCG + A +LF RI R D++++NAMI G G + S LFR ++
Sbjct: 244 DYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLF 303
Query: 226 QGMKPDCFTLGSI--LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
G + T+ + L + G + L IH +K G+ + ++ + +Y K I
Sbjct: 304 SGERVSSSTIVGLIPLHSPFGHLHLA--CSIHGFCVKSGIILNPTVSTAFTAIYNKLNEI 361
Query: 284 RSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNI 343
A L+ + +++ A+ISG+ ++ + ++ A LFK+M+ + + V + +L+
Sbjct: 362 DLARHLFDESPEKTVVAWNAMISGYTQNGS-TETAISLFKEMMKTEFTPNAVTITTILSA 420
Query: 344 CANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISW 403
CA + SL+ G+ +H + V AL+DMYAK G I++A + FD M +KN ++W
Sbjct: 421 CAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTW 480
Query: 404 TSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMIN 463
++I GY HGYGHEA++LY +M H G P+ VTFLS+L+ACSH GL EG E+F +M+N
Sbjct: 481 NTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVN 540
Query: 464 KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGE 523
KYRI P EH++C+VD+ R GQLE A I++M ++P ++W +LGAC I+ +T +
Sbjct: 541 KYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIAR 600
Query: 524 LAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
LA+ LF+++P YV+LSNIY+ + A R+++++R L K+PG + ++
Sbjct: 601 LASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIE 655
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/486 (27%), Positives = 239/486 (49%), Gaps = 17/486 (3%)
Query: 39 FCIDKKAERQAHL--IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNV 96
F + KA HL HA I NGY +L TK+ AR F +P+ ++
Sbjct: 16 FSLINKASTFPHLAQTHAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPKPDI 75
Query: 97 VSWTAMISGYAQNGYDENALLVFSAMLR-SGVRANQFTYSSALRACA---RMRWLQGGRM 152
+ ++ G++ N +++ +++ + R + + + FTY+ A+ AC+ + L +
Sbjct: 76 FLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLMLLHAHSI 135
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF 212
I G + N+FV SAL+DLY K + A +F+ + +D V WN MI GL
Sbjct: 136 IDG------YGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCC 189
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS 272
DDS LFR M+ G++ D T+ ++L A+ EL I L +K+G + +
Sbjct: 190 FDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTG 249
Query: 273 LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI 332
LI +Y+K G + +A L+R + + D+I+ A+ISGF + ++ + LF++++ +
Sbjct: 250 LISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGG-TECSVKLFRELLFSGERV 308
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAF 392
+ ++ + + L+L IH F K + V A +Y K EI A F
Sbjct: 309 SSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLF 368
Query: 393 DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG-LT 451
DE +K V++W ++I+GY ++G AI L+K+M PN VT ++L AC+ G L+
Sbjct: 369 DESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLS 428
Query: 452 CEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
W +I + P + +VD++A+ G + A+ + M+ K T + W+ ++
Sbjct: 429 FGKW--VHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVT-WNTMIF 485
Query: 512 ACSIYG 517
++G
Sbjct: 486 GYGLHG 491
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/553 (36%), Positives = 323/553 (58%), Gaps = 7/553 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ S+L+ C + IHAH+I G+ES++ + +I Y K GD+ +AR FD+M
Sbjct: 200 TFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKM 259
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P+R+ +SW AMISGY +NG L +FS M V + T ++ AC + + GR
Sbjct: 260 PKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGR 319
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ G + K F ++ + ++L+ +Y+ G +E+A +F R+E KDVVSW AMI L
Sbjct: 320 GVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHK 379
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRAS--VGGIELMKISQIHDLIIKLGLESSNKL 269
+ ++ M +G+ PD TL S+L A +G ++L ++H++ IK GL S +
Sbjct: 380 LPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLG--IRLHEIAIKTGLVSHVIV 437
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+ SLID+Y+K + +A +++R++ +++S T+LI G R +N S EA F+ M +
Sbjct: 438 SNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGL-RINNRSFEALLFFRQM-KES 495
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
M + V L +L+ CA + +L G++IHA A + +D + NA++DMY + G A
Sbjct: 496 MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPAL 555
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
F+ K+V +W L+ GYA+ G A+EL+ KM + P+++TF+SLL ACS +G
Sbjct: 556 NQFNSQ-KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSG 614
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
+ EG E F M NKY + P +H++CVVD+ R GQL+ AY+ I+ M I+P A++W A+
Sbjct: 615 MVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGAL 674
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
L AC I+ N LGE+AA+ +F+ + + Y++L N+Y G WD K R LM ER L
Sbjct: 675 LNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLS 734
Query: 570 KNPGYSFLQSSKK 582
+PG S+++ K
Sbjct: 735 ADPGCSWVEIKGK 747
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 157/532 (29%), Positives = 268/532 (50%), Gaps = 29/532 (5%)
Query: 11 GQLKQALKFSLSCPDTLLD--PSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLS 68
G L+QA+K S + ++ Y++LL+ C ++A + ++ + ++ + L
Sbjct: 76 GNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLG 135
Query: 69 TKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR 128
++ + + G++L A F +M ER+V SW ++ GYA+ G + AL ++ ML + +R
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195
Query: 129 ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWIL 188
N +T+ S L+ CA + + G+ I + + F ++ V +AL+ +Y KCG I +A +L
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARML 255
Query: 189 FERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ-GMKPDCFTLGSILRASVGGIE 247
F+++ ++D +SWNAMI G G + LF SMMR+ + PD T+ ++ A E
Sbjct: 256 FDKMPKRDRISWNAMISGYFENGGGLEGLELF-SMMRELSVDPDLITMTTVASAC----E 310
Query: 248 LMKISQ----IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTA 303
L+ + +H ++K + SLI +Y+ G + A ++ M D++S TA
Sbjct: 311 LLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTA 370
Query: 304 LISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY 363
+I+ K A + +K M L+ + D++ L +L+ CA + L+LG ++H A K
Sbjct: 371 MIASLVSHKLPFK-AVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKT 429
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELY 423
V N+LIDMY+K + +A F + KNV+SWTSLI G + EA+ +
Sbjct: 430 GLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFF 489
Query: 424 KKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY----RILPRAEHFSCVVD 479
++MK E M PN VT +S+L AC+ G G E+ + LP A ++D
Sbjct: 490 RQMK-ESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNA-----ILD 543
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
++ R G+ A N TA W+ +L + G L A LFD
Sbjct: 544 MYVRCGRKVPALNQFNSQKKDVTA--WNILLTGYAQQGQAKL----AVELFD 589
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/553 (36%), Positives = 323/553 (58%), Gaps = 7/553 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ S+L+ C + IHAH+I G+ES++ + +I Y K GD+ +AR FD+M
Sbjct: 200 TFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKM 259
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P+R+ +SW AMISGY +NG L +FS M V + T ++ AC + + GR
Sbjct: 260 PKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGR 319
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ G + K F ++ + ++L+ +Y+ G +E+A +F R+E KDVVSW AMI L
Sbjct: 320 GVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHK 379
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRAS--VGGIELMKISQIHDLIIKLGLESSNKL 269
+ ++ M +G+ PD TL S+L A +G ++L ++H++ IK GL S +
Sbjct: 380 LPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLG--IRLHEIAIKTGLVSHVIV 437
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+ SLID+Y+K + +A +++R++ +++S T+LI G R +N S EA F+ M +
Sbjct: 438 SNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGL-RINNRSFEALLFFRQM-KES 495
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
M + V L +L+ CA + +L G++IHA A + +D + NA++DMY + G A
Sbjct: 496 MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPAL 555
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
F+ K+V +W L+ GYA+ G A+EL+ KM + P+++TF+SLL ACS +G
Sbjct: 556 NQFNSQ-KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSG 614
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
+ EG E F M NKY + P +H++CVVD+ R GQL+ AY+ I+ M I+P A++W A+
Sbjct: 615 MVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGAL 674
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
L AC I+ N LGE+AA+ +F+ + + Y++L N+Y G WD K R LM ER L
Sbjct: 675 LNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLS 734
Query: 570 KNPGYSFLQSSKK 582
+PG S+++ K
Sbjct: 735 ADPGCSWVEIKGK 747
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 157/532 (29%), Positives = 268/532 (50%), Gaps = 29/532 (5%)
Query: 11 GQLKQALKFSLSCPDTLLD--PSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLS 68
G L+QA+K S + ++ Y++LL+ C ++A + ++ + ++ + L
Sbjct: 76 GNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLG 135
Query: 69 TKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR 128
++ + + G++L A F +M ER+V SW ++ GYA+ G + AL ++ ML + +R
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195
Query: 129 ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWIL 188
N +T+ S L+ CA + + G+ I + + F ++ V +AL+ +Y KCG I +A +L
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARML 255
Query: 189 FERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ-GMKPDCFTLGSILRASVGGIE 247
F+++ ++D +SWNAMI G G + LF SMMR+ + PD T+ ++ A E
Sbjct: 256 FDKMPKRDRISWNAMISGYFENGGGLEGLELF-SMMRELSVDPDLITMTTVASAC----E 310
Query: 248 LMKISQ----IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTA 303
L+ + +H ++K + SLI +Y+ G + A ++ M D++S TA
Sbjct: 311 LLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTA 370
Query: 304 LISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY 363
+I+ K A + +K M L+ + D++ L +L+ CA + L+LG ++H A K
Sbjct: 371 MIASLVSHKLPFK-AVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKT 429
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELY 423
V N+LIDMY+K + +A F + KNV+SWTSLI G + EA+ +
Sbjct: 430 GLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFF 489
Query: 424 KKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY----RILPRAEHFSCVVD 479
++MK E M PN VT +S+L AC+ G G E+ + LP A ++D
Sbjct: 490 RQMK-ESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNA-----ILD 543
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
++ R G+ A N TA W+ +L + G L A LFD
Sbjct: 544 MYVRCGRKVPALNQFNSQKKDVTA--WNILLTGYAQQGQAKL----AVELFD 589
>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15130
gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/553 (36%), Positives = 322/553 (58%), Gaps = 5/553 (0%)
Query: 34 MSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPE 93
+S+L+ C K Q +H +++ +G NL S +I Y K + L A K FD MPE
Sbjct: 10 VSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPE 69
Query: 94 RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMI 153
RNVVSW+A++SG+ NG + +L +FS M R G+ N+FT+S+ L+AC + L+ G I
Sbjct: 70 RNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQI 129
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN 213
G K F + V ++L+D+Y+KCG I +A +F RI + ++SWNAMI G G+
Sbjct: 130 HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYG 189
Query: 214 DDSFWLFRSMMRQGMK--PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE--SSNKL 269
+ F M +K PD FTL S+L+A + QIH +++ G SS +
Sbjct: 190 SKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATI 249
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
TGSL+D+Y K G + SA + + + + +IS ++LI G+A++ EA LFK +
Sbjct: 250 TGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFV-EAMGLFKRLQELN 308
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
ID L ++ + A+ A L G+Q+ A A K S + +V N+++DMY K G + +A
Sbjct: 309 SQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAE 368
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
+ F EM K+VISWT +I GY KHG G +++ ++ +M + P++V +L++L ACSH+G
Sbjct: 369 KCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSG 428
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
+ EG ELF+ ++ + I PR EH++CVVDL R G+L+ A ++I M IKP +W +
Sbjct: 429 MIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTL 488
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
L C ++G+ LG+ + L ++ + NYV++SN+Y AG W+ R+L + L+
Sbjct: 489 LSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLK 548
Query: 570 KNPGYSFLQSSKK 582
K G S+++ ++
Sbjct: 549 KEAGMSWVEIERE 561
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 206/407 (50%), Gaps = 23/407 (5%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ + L+ C A + IH + G+E + + ++ Y+K G + A K F R+
Sbjct: 109 TFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI 168
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV--RANQFTYSSALRACARMRWLQG 149
+R+++SW AMI+G+ GY AL F M + + R ++FT +S L+AC+ +
Sbjct: 169 VDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYA 228
Query: 150 GRMIQGSIQKGRF--VENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ I G + + F + + +L+DLY KCG++ A F++I+ K ++SW+++I G
Sbjct: 229 GKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGY 288
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKL--GLES 265
A +G ++ LF+ + + D F L SI+ L + Q+ L +KL GLE+
Sbjct: 289 AQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLET 348
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
S + S++D+Y K G + A + + M D+IS T +I+G+ + K++ +F +M
Sbjct: 349 S--VLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGK-HGLGKKSVRIFYEM 405
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQ-----IHAFAFKYQSSYDAAVGNALIDMYA 380
+ + D+V +L+ C++ + G + + K + + A V +D+
Sbjct: 406 LRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACV----VDLLG 461
Query: 381 KSGEIADANRAFDEMGDK-NVISWTSLIAGYAKHGYGHEAIELYKKM 426
++G + +A D M K NV W +L++ HG IEL K++
Sbjct: 462 RAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHG----DIELGKEV 504
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/576 (35%), Positives = 313/576 (54%), Gaps = 11/576 (1%)
Query: 12 QLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKV 71
++ + ++FS PD + T SLL C ++ +H+++ G S+ + +
Sbjct: 230 EIFEEMQFSGLSPDCV----TISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSL 285
Query: 72 IIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQ 131
+ Y K GDV +A F+ NVV W M+ + Q + +F M +G+R NQ
Sbjct: 286 LDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQ 345
Query: 132 FTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER 191
FTY LR C R + G I K F +++V L+D+Y+K GW+E A + E
Sbjct: 346 FTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEM 405
Query: 192 IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI 251
++ KDVVSW +MI G D+ F+ M + G+ PD L S + G + +
Sbjct: 406 LKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQG 465
Query: 252 SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD 311
QIH I G + +L+++YA+ G IR A+ + M D I+ L+SGFA+
Sbjct: 466 LQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQS 525
Query: 312 DNHSKEAFDLFKDMILKKMGIDDVILCLM--LNICANVASLNLGRQIHAFAFKYQSSYDA 369
H +EA +F M + + G+ + + L+ AN+A + G+QIHA K S++
Sbjct: 526 GLH-EEALKVF--MRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFET 582
Query: 370 AVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE 429
VGNALI +Y K G DA F EM ++N +SW ++I ++HG G EA++L+ +MK E
Sbjct: 583 EVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKE 642
Query: 430 GMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLES 489
G+ PNDVTF+ +L ACSH GL EG F M ++Y I PR +H++CV+D+F R GQL+
Sbjct: 643 GIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDR 702
Query: 490 AYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTA 549
A I +M I A +W +L AC ++ N +GE AA++L ++EP S +YV+LSN Y
Sbjct: 703 AKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAV 762
Query: 550 AGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKNIL 585
W N + RK+M +R +RK PG S+++ KN++
Sbjct: 763 TEKWANRDQVRKMMRDRGVRKEPGRSWIEV--KNVV 796
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 166/508 (32%), Positives = 274/508 (53%), Gaps = 17/508 (3%)
Query: 30 PSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
P+ Y+ S+L C + Q LIHA +G+ S + + VI Y + G A +
Sbjct: 141 PTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERV 200
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F MP R+ V++ +ISG+AQ G+ E+AL +F M SG+ + T SS L ACA + L
Sbjct: 201 FCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDL 260
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
Q G + + K + ++ +LLDLY KCG +E A ++F +R +VV WN M+ +
Sbjct: 261 QKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLML--V 318
Query: 208 AMQGFND--DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
A ND SF LF M G++P+ FT ILR E+ QIH L +K G ES
Sbjct: 319 AFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFES 378
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
++G LID+Y+KYG + A ++ + + D++S T++I+G+ + + K+A FK+M
Sbjct: 379 DMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEC-CKDALAAFKEM 437
Query: 326 ILKKMGI--DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
+K GI D++ L ++ CA + ++ G QIHA + S D ++ NAL+++YA+ G
Sbjct: 438 --QKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCG 495
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
I +A +F+EM K+ I+ L++G+A+ G EA++++ +M G+ N TF+S L
Sbjct: 496 RIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALS 555
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
A ++ +G ++ +I E + ++ L+ + G E A +M+ +
Sbjct: 556 ASANLAEIKQGKQIHARVIKTGHSF-ETEVGNALISLYGKCGSFEDAKMEFSEMSERNEV 614
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFD 531
S W+ I+ +CS +G L A +LFD
Sbjct: 615 S-WNTIITSCSQHGRG----LEALDLFD 637
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 139/450 (30%), Positives = 240/450 (53%), Gaps = 4/450 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IHA +T G + +I Y+K G VL AR+ F+ + R+ VSW AM+SGYAQNG
Sbjct: 64 IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
E AL ++ M R+GV + SS L +C + GR+I K F +FV +A
Sbjct: 124 GEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNA 183
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
++ LY +CG A +F + +D V++N +I G A G + + +F M G+ PD
Sbjct: 184 VITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPD 243
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
C T+ S+L A +L K +Q+H + K G+ S + GSL+D+Y K G + +A ++
Sbjct: 244 CVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFN 303
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
S +T+++ ++ F + ++ +K +F+LF M + + +L C ++
Sbjct: 304 SSDRTNVVLWNLMLVAFGQINDLAK-SFELFCQMQAAGIRPNQFTYPCILRTCTCTREID 362
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
LG QIH+ + K D V LIDMY+K G + A R + + +K+V+SWTS+IAGY
Sbjct: 363 LGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYV 422
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM-INKYRILPR 470
+H +A+ +K+M+ G+ P+++ S + C+ +G ++ + ++ Y
Sbjct: 423 QHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYS--GD 480
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIK 500
++ +V+L+AR G++ A++ +M +K
Sbjct: 481 VSIWNALVNLYARCGRIREAFSSFEEMELK 510
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 198/431 (45%), Gaps = 21/431 (4%)
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA--RMRWLQ 148
M R S ++G+ + L +F+ R ++ ALRAC RW
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 149 GGRMIQGSIQKG----RFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
+ ++ +G R V NL L+DLY+K G + A +FE + +D VSW AM+
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNL-----LIDLYSKNGLVLPARRVFEELSARDNVSWVAML 115
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G A G +++ L+R M R G+ P + L S+L + + IH K G
Sbjct: 116 SGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFC 175
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
S + ++I +Y + GS R A +++ M D ++ LISG A+ H + A ++F++
Sbjct: 176 SEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQ-CGHGEHALEIFEE 234
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M + D V + +L CA++ L G Q+H++ FK S D + +L+D+Y K G+
Sbjct: 235 MQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGD 294
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ A F+ NV+ W ++ + + ++ EL+ +M+ G+ PN T+ +L
Sbjct: 295 VETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRT 354
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEH----FSCVVDLFARRGQLESAYNMIRQMNIK 500
C TC + I+ + E ++D++++ G LE A ++ + K
Sbjct: 355 C-----TCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK 409
Query: 501 PTASLWSAILG 511
S S I G
Sbjct: 410 DVVSWTSMIAG 420
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 184/397 (46%), Gaps = 60/397 (15%)
Query: 219 LFRSMMRQ--GMKPDCFTLGSILRASVG-GIELMKISQIHDLIIKLGLESSNKLTGSLID 275
LF RQ G+ P LRA G G + +IH + GL + LID
Sbjct: 28 LFADKARQHGGLGP--LDFACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLID 85
Query: 276 VYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDV 335
+Y+K G + A +++ + D +S A++SG+A+ + +EA L++ M +
Sbjct: 86 LYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ-NGLGEEALGLYRQMHRAGVVPTPY 144
Query: 336 ILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEM 395
+L +L+ C GR IHA +K+ + VGNA+I +Y + G A R F +M
Sbjct: 145 VLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDM 204
Query: 396 GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGW 455
++ +++ +LI+G+A+ G+G A+E++++M+ G+ P+ VT SLL AC+ G +G
Sbjct: 205 PHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGT 264
Query: 456 E----LFTDMINKYRILPRAEHFSCVVDLFARRGQLESA--------------------- 490
+ LF I+ I+ + ++DL+ + G +E+A
Sbjct: 265 QLHSYLFKAGISSDYIMEGS-----LLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVA 319
Query: 491 ----------YNMIRQMN---IKPTASLWSAILGACSIYGNTSLGE----LAARNLFDME 533
+ + QM I+P + IL C+ LGE L+ + F+
Sbjct: 320 FGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFE-- 377
Query: 534 PEKSVNYV--VLSNIYTAAGAWDNARKTRKLMEERSL 568
S YV VL ++Y+ G + AR+ ++++E+ +
Sbjct: 378 ---SDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDV 411
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 123/272 (45%), Gaps = 8/272 (2%)
Query: 293 MLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNIC-ANVASLN 351
M + S ++GF ++ +K LF D + G+ + L C N
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAK-VLSLFADKARQHGGLGPLDFACALRACRGNGRRWQ 59
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
+ +IHA A VGN LID+Y+K+G + A R F+E+ ++ +SW ++++GYA
Sbjct: 60 VVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYA 119
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
++G G EA+ LY++M G+VP S+L +C+ L +G L K+
Sbjct: 120 QNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQG-RLIHAQGYKHGFCSEI 178
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
+ V+ L+ R G A + M + T + + I G + GE A +
Sbjct: 179 FVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISG----HAQCGHGEHALEIFEE 234
Query: 532 MEPEK-SVNYVVLSNIYTAAGAWDNARKTRKL 562
M+ S + V +S++ A + + +K +L
Sbjct: 235 MQFSGLSPDCVTISSLLAACASLGDLQKGTQL 266
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/538 (34%), Positives = 320/538 (59%), Gaps = 7/538 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HA ++ +G+E + + +I Y+++G + AR FD+M R+ V+W +MI+GY +NG
Sbjct: 216 VHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQ 275
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
D +F+ M +GV+ T++S +++CA +R L +++Q K F + V +A
Sbjct: 276 DLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITA 335
Query: 172 LLDLYAKCGWIEDAWILFERIER-KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
L+ +KC ++DA LF +E K+VVSW AMI G G ND + LF M R+G+KP
Sbjct: 336 LMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKP 395
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
+ FT +IL + +S++H +IK E S+ + +L+D Y K G+ A +++
Sbjct: 396 NHFTYSAILTVHYP----VFVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVF 451
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICAN-VAS 349
+ D+++ +A+++G+A+ ++EA LF +I + + ++ ++N CA+ A+
Sbjct: 452 EIIEAKDLMAWSAMLAGYAQT-GETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAA 510
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
G+Q HA+A K + + V +AL+ MYAK G I A+ F +++++SW S+I+G
Sbjct: 511 AEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISG 570
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
Y++HG +A+E++ +M+ M + VTF+ ++ AC+H GL +G + F MIN + I P
Sbjct: 571 YSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINP 630
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
+H+SC++DL++R G LE A +I +M P A++W +LGA ++ N LGELAA L
Sbjct: 631 TMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKL 690
Query: 530 FDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKNILLL 587
++PE S YV+LSN+Y AAG W RKLM++R ++K PGYS+++ K L
Sbjct: 691 ISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFL 748
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 157/564 (27%), Positives = 285/564 (50%), Gaps = 36/564 (6%)
Query: 12 QLKQALKFSLSCPDTLLDP--STYMSLLQFC---IDKKAERQAHLIHAHIITNGYESNLH 66
Q K+AL +S + L P ST + C +D K RQ +H + G ++
Sbjct: 73 QTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQ---VHCQCVKFGLVDHVS 129
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ T ++ Y K +V R+ FD M ERNVVSWT++++GY+ NG +F M G
Sbjct: 130 VGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEG 189
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
V N++T S+ + A + G + + K F E + V ++L+ LY++ G + DA
Sbjct: 190 VLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDAR 249
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVG 244
+F+++E +D V+WN+MI G G + + F +F M G+KP T S+++ AS+
Sbjct: 250 DVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLR 309
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLK-TDIISCTA 303
+ L+K+ Q L K G + + +L+ +K + A L+ M + +++S TA
Sbjct: 310 ELALVKLMQCKAL--KSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTA 367
Query: 304 LISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY 363
+ISG ++ + +A +LF M + + + +L + V ++HA K
Sbjct: 368 MISGCLQNGGND-QAVNLFSQMRREGVKPNHFTYSAILTVHYPV----FVSEMHAEVIKT 422
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELY 423
++VG AL+D Y K G DA + F+ + K++++W++++AGYA+ G EA +L+
Sbjct: 423 NYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLF 482
Query: 424 KKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV----VD 479
++ EG+ PN+ TF S++ AC+ E + F + Y I R + CV V
Sbjct: 483 HQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQF----HAYAIKMRLNNALCVSSALVT 538
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTS-----LGELAARNLFDMEP 534
++A+RG ++SA+ + ++ + S W++++ S +G E+ RN+ D++
Sbjct: 539 MYAKRGNIDSAHEVFKRQKERDLVS-WNSMISGYSQHGQAKKALEVFDEMQKRNM-DVD- 595
Query: 535 EKSVNYVVLSNIYTAAGAWDNARK 558
+V ++ + T AG + +K
Sbjct: 596 --AVTFIGVITACTHAGLVEKGQK 617
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 120/209 (57%), Gaps = 4/209 (1%)
Query: 304 LISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY 363
L+ ++RD +KEA +LF ++ + D+ L + NICA LGRQ+H K+
Sbjct: 64 LLFSYSRD-KQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKF 122
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG-YGHEAIEL 422
+VG +L+DMY K+ + D R FDEMG++NV+SWTSL+AGY+ +G YG+ EL
Sbjct: 123 GLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGY-VWEL 181
Query: 423 YKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFA 482
+ +M++EG++PN T +++ A + G+ G ++ M+ K+ F+ ++ L++
Sbjct: 182 FCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHA-MVVKHGFEEAIPVFNSLISLYS 240
Query: 483 RRGQLESAYNMIRQMNIKPTASLWSAILG 511
R G L A ++ +M I+ + S I G
Sbjct: 241 RLGMLRDARDVFDKMEIRDWVTWNSMIAG 269
>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 777
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/557 (35%), Positives = 313/557 (56%), Gaps = 8/557 (1%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS 83
PD L T+ S+++ C +H H+I +GY+ +L +I Y K G +
Sbjct: 179 PDQL----TFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAH 234
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV-RANQFTYSSALRACA 142
A F + ++++SW +MI+G+ Q GY+ AL +F M R GV + N+F + S AC
Sbjct: 235 ASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACR 294
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
+ + GR IQG K N+F +L D+YAK G++ A F +IE D+VSWNA
Sbjct: 295 SLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNA 354
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
+I LA N+ + + F M+ G+ PD T ++L A + L + QIH IIK+G
Sbjct: 355 IIAALANSDVNE-AIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMG 413
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT-DIISCTALISGFARDDNHSKEAFDL 321
L+ + SL+ +Y K ++ A+ +++ + + +++S A++S ++ EAF L
Sbjct: 414 LDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQH-KQPGEAFRL 472
Query: 322 FKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
FK M+ + D++ + +L CA + SL +G Q+H F+ K D +V N LIDMYAK
Sbjct: 473 FKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAK 532
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
G + A FD + +++SW+SLI GYA+ G G EA+ L++ M++ G+ PN+VT+L +
Sbjct: 533 CGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEVTYLGV 592
Query: 442 LFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
L ACSH GL EGW L+ M + I P EH SC+VDL AR G L A N I++ P
Sbjct: 593 LSACSHIGLVEEGWHLYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKTGFDP 652
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRK 561
++W +L +C +GN + E AA N+ ++P S V+LSNI+ +AG W + R
Sbjct: 653 DITMWKTLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASAGNWKEVARLRN 712
Query: 562 LMEERSLRKNPGYSFLQ 578
LM++ ++K PG S+++
Sbjct: 713 LMKQMGVQKVPGQSWIE 729
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 161/524 (30%), Positives = 268/524 (51%), Gaps = 20/524 (3%)
Query: 16 ALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFY 75
F L L+PSTY++L+ C + ++ + IH HI+ + + +L L ++ Y
Sbjct: 66 TFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHDHILKSNCQPDLVLQNHILNMY 125
Query: 76 AKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYS 135
K G + ARKAFD M R+VVSWT MISGY+QNG + +A++++ MLRSG +Q T+
Sbjct: 126 GKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFG 185
Query: 136 SALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERK 195
S ++AC + G + G + K + +L ++AL+ +Y K G I A +F I K
Sbjct: 186 SIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTK 245
Query: 196 DVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGM-KPDCFTLGSILRASVGGIELMKISQI 254
D++SW +MI G G+ ++ +LFR M RQG+ +P+ F GS+ A ++ QI
Sbjct: 246 DLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQI 305
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH 314
+ K GL + SL D+YAK+G + SA + + + D++S A+I+ A D
Sbjct: 306 QGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALANSD-- 363
Query: 315 SKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNA 374
EA F MI + DD+ +L C + +LN G QIH++ K AAV N+
Sbjct: 364 VNEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMGLDKVAAVCNS 423
Query: 375 LIDMYAKSGEIADANRAFDEMGDK-NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP 433
L+ MY K + DA F ++ + N++SW ++++ ++H EA L+K M P
Sbjct: 424 LLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKP 483
Query: 434 NDVTFLSLLFACS-----HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLE 488
+++T ++L C+ G + + + ++ + R ++D++A+ G L+
Sbjct: 484 DNITITTILGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSNR------LIDMYAKCGLLK 537
Query: 489 SAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDM 532
A + P WS+++ Y LG+ A NLF M
Sbjct: 538 HARYVFDSTQ-NPDIVSWSSLIVG---YAQFGLGQ-EALNLFRM 576
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/548 (34%), Positives = 319/548 (58%), Gaps = 1/548 (0%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
S++ C + Q IH ++I GY+S+ + ++ YAKVG + A FD + +
Sbjct: 116 SMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKP 175
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
++VSW A+I+G + Y AL + M +SG+ N FT SSAL+ACA M + GR +
Sbjct: 176 DIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLH 235
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND 214
S+ K + F+ L+D+Y+KC ++DA ++F+ + +D+++WNA+I G + ++
Sbjct: 236 SSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDE 295
Query: 215 DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLI 274
++ LF M +G+ + TL ++L++ QIH L +K G E N + SLI
Sbjct: 296 EAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLI 355
Query: 275 DVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD 334
D Y K G + A +++ D++ T+L++ +A+D +EA L+ +M + + D
Sbjct: 356 DTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQD-GQGEEALRLYLEMQDRGIKPDS 414
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE 394
+ +LN CA++++ G+Q+H K+ D GN+L++MYAK G I DA+ AF
Sbjct: 415 FVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSR 474
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG 454
+ + ++SW+++I G A+HGYG EA++L+K+M G+ PN +T +S+L AC+H GL E
Sbjct: 475 IPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEA 534
Query: 455 WELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACS 514
F M + I P EH++C++DL R G+LE+A ++ +M + A +W A+LGA
Sbjct: 535 KHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAAR 594
Query: 515 IYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGY 574
I+ N LGE AA L +EPEKS +V+L+NIY + G WD + R+LM++ ++K PG
Sbjct: 595 IHKNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGM 654
Query: 575 SFLQSSKK 582
S+L+ K
Sbjct: 655 SWLEVKDK 662
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 157/487 (32%), Positives = 271/487 (55%), Gaps = 5/487 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
+ S+L+ C K +H ++ G++S+ ++ ++I YAK G AR FD +
Sbjct: 12 AFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAI 71
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P+R+VVSW A+ S Y + A+ +F M+ SG+R N+F+ SS + C + GR
Sbjct: 72 PDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGR 131
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I G + K + + F +AL+D+YAK G +EDA +F+ I + D+VSWNA+I G +
Sbjct: 132 KIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHE 191
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLGLESSNKLT 270
++ + L R M + GM P+ FTL S L+A G+ L ++ Q+H +IK+ + S + L
Sbjct: 192 YHHRALELLREMNKSGMCPNMFTLSSALKA-CAGMALRELGRQLHSSLIKMDMGSDSFLG 250
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
LID+Y+K S+ A +++ M + D+I+ A+ISG ++++ +EA LF M + +
Sbjct: 251 VGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEE-DEEAASLFPLMHTEGI 309
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
G + L +L A + + + RQIHA + K +D V N+LID Y K G + DA R
Sbjct: 310 GFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATR 369
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
F+E +++ +TSL+ YA+ G G EA+ LY +M+ G+ P+ SLL AC+
Sbjct: 370 VFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSA 429
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
+G ++ ++ K+ + + +V+++A+ G +E A ++ ++ S WSA++
Sbjct: 430 YEQGKQVHVHIL-KFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVS-WSAMI 487
Query: 511 GACSIYG 517
G + +G
Sbjct: 488 GGLAQHG 494
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/422 (29%), Positives = 210/422 (49%), Gaps = 34/422 (8%)
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
G++ N+F + S L+AC + L G+ + G + F + FV ++L+ LYAKCG DA
Sbjct: 5 GIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDA 64
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGG 245
LF+ I + VVSWNA+ + ++ LF M+ G++P+ F+L S++ G
Sbjct: 65 RSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGL 124
Query: 246 IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALI 305
+ ++ +IH +IKLG +S +L+D+YAK G + A ++ + K DI+S A+I
Sbjct: 125 EDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAII 184
Query: 306 SGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS 365
+G + H + A +L ++M M + L L CA +A LGRQ+H+ K
Sbjct: 185 AGCVLHEYHHR-ALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDM 243
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKK 425
D+ +G LIDMY+K + DA F M ++++I+W ++I+G++++ EA L+
Sbjct: 244 GSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPL 303
Query: 426 MKHEGMVPNDVTFLSLL--FACSHTGLTCE---------GWE----LFTDMINKYRILPR 470
M EG+ N T ++L A C G+E + +I+ Y
Sbjct: 304 MHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGH 363
Query: 471 AEH---------------FSCVVDLFARRGQLESAYNMIRQMN---IKPTASLWSAILGA 512
E F+ +V +A+ GQ E A + +M IKP + + S++L A
Sbjct: 364 VEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNA 423
Query: 513 CS 514
C+
Sbjct: 424 CA 425
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 200/420 (47%), Gaps = 26/420 (6%)
Query: 23 CPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVL 82
CP+ T S L+ C +H+ +I S+ L +I Y+K +
Sbjct: 209 CPNMF----TLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMD 264
Query: 83 SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA 142
AR F MPER++++W A+ISG++QN DE A +F M G+ NQ T S+ L++ A
Sbjct: 265 DARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIA 324
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
++ R I K F + +V ++L+D Y KCG +EDA +FE D+V + +
Sbjct: 325 ALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTS 384
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
++ A G +++ L+ M +G+KPD F S+L A + Q+H I+K G
Sbjct: 385 LVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFG 444
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
S SL+++YAK GSI A + + I+S +A+I G A+ + KEA LF
Sbjct: 445 FMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQ-HGYGKEALQLF 503
Query: 323 KDMILKKMGIDDVILCLMLNICA-NVASLNLGRQIHAFAFKYQSSYDAAVG--------N 373
K M+ K+G+ + L+ +CA N A L A A Y +S G
Sbjct: 504 KQML--KVGVPPNHITLVSVLCACNHAGLV------AEAKHYFNSMKILFGIEPMQEHYA 555
Query: 374 ALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKH---GYGHEAIELYKKMKHE 429
+ID+ ++G++ A ++M N + W +L+ H G +A E+ ++ E
Sbjct: 556 CMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEMLLALEPE 615
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/576 (34%), Positives = 313/576 (54%), Gaps = 11/576 (1%)
Query: 12 QLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKV 71
++ + ++FS PD + T SLL C ++ +H+++ G S+ + +
Sbjct: 230 EIFEEMQFSGLSPDCV----TISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSL 285
Query: 72 IIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQ 131
+ Y K GDV +A F+ NVV W M+ + Q + +F M +G+R NQ
Sbjct: 286 LDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQ 345
Query: 132 FTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER 191
FTY LR C R + G I K F +++V L+D+Y+K GW+E A + E
Sbjct: 346 FTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEM 405
Query: 192 IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI 251
++ KDVVSW +MI G D+ F+ M + G+ PD L S + G + +
Sbjct: 406 LKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQG 465
Query: 252 SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD 311
QIH I G + +L+++YA+ G IR A+ + + D I+ L+SGFA+
Sbjct: 466 LQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQS 525
Query: 312 DNHSKEAFDLFKDMILKKMGIDDVILCLM--LNICANVASLNLGRQIHAFAFKYQSSYDA 369
H +EA +F M + + G+ + + L+ AN+A + G+QIHA K S++
Sbjct: 526 GLH-EEALKVF--MRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFET 582
Query: 370 AVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE 429
VGNALI +Y K G DA F EM ++N +SW ++I ++HG G EA++L+ +MK E
Sbjct: 583 EVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKE 642
Query: 430 GMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLES 489
G+ PNDVTF+ +L ACSH GL EG F M ++Y I PR +H++CV+D+F R GQL+
Sbjct: 643 GIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDR 702
Query: 490 AYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTA 549
A I +M I A +W +L AC ++ N +GE AA++L ++EP S +YV+LSN Y
Sbjct: 703 AKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAV 762
Query: 550 AGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKNIL 585
W N + RK+M +R +RK PG S+++ KN++
Sbjct: 763 TEKWANRDQVRKMMRDRGVRKEPGRSWIEV--KNVV 796
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 166/508 (32%), Positives = 275/508 (54%), Gaps = 17/508 (3%)
Query: 30 PSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
P+ Y+ S+L C + Q LIHA +G+ S + + VI Y + G A +
Sbjct: 141 PTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERV 200
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F MP R+ V++ +ISG+AQ G+ E+AL +F M SG+ + T SS L ACA + L
Sbjct: 201 FCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDL 260
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
Q G + + K + ++ +LLDLY KCG +E A ++F +R +VV WN M+ +
Sbjct: 261 QKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLML--V 318
Query: 208 AMQGFND--DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
A ND SF LF M G++P+ FT ILR E+ QIH L +K G ES
Sbjct: 319 AFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFES 378
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
++G LID+Y+KYG + A ++ + + D++S T++I+G+ + + K+A FK+M
Sbjct: 379 DMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEC-CKDALAAFKEM 437
Query: 326 ILKKMGI--DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
+K GI D++ L ++ CA + ++ G QIHA + S D ++ NAL+++YA+ G
Sbjct: 438 --QKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCG 495
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
I +A +F+E+ K+ I+W L++G+A+ G EA++++ +M G+ N TF+S L
Sbjct: 496 RIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALS 555
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
A ++ +G ++ +I E + ++ L+ + G E A +M+ +
Sbjct: 556 ASANLAEIKQGKQIHARVIKTGHSF-ETEVGNALISLYGKCGSFEDAKMEFSEMSERNEV 614
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFD 531
S W+ I+ +CS +G L A +LFD
Sbjct: 615 S-WNTIITSCSQHGRG----LEALDLFD 637
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 153/527 (29%), Positives = 273/527 (51%), Gaps = 12/527 (2%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IHA +T G + +I Y+K G VL AR+ F+ + R+ VSW AM+SGYAQNG
Sbjct: 64 IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
E AL ++ M R+GV + SS L +C + GR+I K F +FV +A
Sbjct: 124 GEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNA 183
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
++ LY +CG A +F + +D V++N +I G A G + + +F M G+ PD
Sbjct: 184 VITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPD 243
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
C T+ S+L A +L K +Q+H + K G+ S + GSL+D+Y K G + +A ++
Sbjct: 244 CVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFN 303
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
S +T+++ ++ F + ++ +K +F+LF M + + +L C ++
Sbjct: 304 SSDRTNVVLWNLMLVAFGQINDLAK-SFELFCQMQAAGIRPNQFTYPCILRTCTCTREID 362
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
LG QIH+ + K D V LIDMY+K G + A R + + +K+V+SWTS+IAGY
Sbjct: 363 LGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYV 422
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM-INKYRILPR 470
+H +A+ +K+M+ G+ P+++ S + C+ +G ++ + ++ Y
Sbjct: 423 QHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYS--GD 480
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
++ +V+L+AR G++ A++ ++ K + W+ ++ S + + L E A +
Sbjct: 481 VSIWNALVNLYARCGRIREAFSSFEEIEHKDEIT-WNGLV---SGFAQSGLHEEALKVFM 536
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNAR-KTRKLMEERSLRKNPGYSF 576
M+ + V + V + + + + + A K K + R ++ G+SF
Sbjct: 537 RMD-QSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKT--GHSF 580
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 198/431 (45%), Gaps = 21/431 (4%)
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA--RMRWLQ 148
M R S ++G+ + L +F+ R ++ ALRAC RW
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 149 GGRMIQGSIQKG----RFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
+ ++ +G R V NL L+DLY+K G + A +FE + +D VSW AM+
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNL-----LIDLYSKNGLVLPARRVFEELSARDNVSWVAML 115
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G A G +++ L+R M R G+ P + L S+L + + IH K G
Sbjct: 116 SGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFC 175
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
S + ++I +Y + GS R A +++ M D ++ LISG A+ H + A ++F++
Sbjct: 176 SEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQ-CGHGEHALEIFEE 234
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M + D V + +L CA++ L G Q+H++ FK S D + +L+D+Y K G+
Sbjct: 235 MQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGD 294
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ A F+ NV+ W ++ + + ++ EL+ +M+ G+ PN T+ +L
Sbjct: 295 VETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRT 354
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEH----FSCVVDLFARRGQLESAYNMIRQMNIK 500
C TC + I+ + E ++D++++ G LE A ++ + K
Sbjct: 355 C-----TCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK 409
Query: 501 PTASLWSAILG 511
S S I G
Sbjct: 410 DVVSWTSMIAG 420
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 183/397 (46%), Gaps = 60/397 (15%)
Query: 219 LFRSMMRQ--GMKPDCFTLGSILRASVG-GIELMKISQIHDLIIKLGLESSNKLTGSLID 275
LF RQ G+ P LRA G G + +IH + GL + LID
Sbjct: 28 LFADKARQHGGLGP--LDFACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLID 85
Query: 276 VYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDV 335
+Y+K G + A +++ + D +S A++SG+A+ + +EA L++ M +
Sbjct: 86 LYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ-NGLGEEALGLYRQMHRAGVVPTPY 144
Query: 336 ILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEM 395
+L +L+ C GR IHA +K+ + VGNA+I +Y + G A R F +M
Sbjct: 145 VLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDM 204
Query: 396 GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGW 455
++ +++ +LI+G+A+ G+G A+E++++M+ G+ P+ VT SLL AC+ G +G
Sbjct: 205 PHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGT 264
Query: 456 E----LFTDMINKYRILPRAEHFSCVVDLFARRGQLESA--------------------- 490
+ LF I+ I+ ++DL+ + G +E+A
Sbjct: 265 QLHSYLFKAGISSDYIME-----GSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVA 319
Query: 491 ----------YNMIRQMN---IKPTASLWSAILGACSIYGNTSLGE----LAARNLFDME 533
+ + QM I+P + IL C+ LGE L+ + F+
Sbjct: 320 FGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFE-- 377
Query: 534 PEKSVNYV--VLSNIYTAAGAWDNARKTRKLMEERSL 568
S YV VL ++Y+ G + AR+ ++++E+ +
Sbjct: 378 ---SDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDV 411
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 123/272 (45%), Gaps = 8/272 (2%)
Query: 293 MLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNIC-ANVASLN 351
M + S ++GF ++ +K LF D + G+ + L C N
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAK-VLSLFADKARQHGGLGPLDFACALRACRGNGRRWQ 59
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
+ +IHA A VGN LID+Y+K+G + A R F+E+ ++ +SW ++++GYA
Sbjct: 60 VVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYA 119
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
++G G EA+ LY++M G+VP S+L +C+ L +G L K+
Sbjct: 120 QNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQG-RLIHAQGYKHGFCSEI 178
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
+ V+ L+ R G A + M + T + + I G + GE A +
Sbjct: 179 FVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISG----HAQCGHGEHALEIFEE 234
Query: 532 MEPEK-SVNYVVLSNIYTAAGAWDNARKTRKL 562
M+ S + V +S++ A + + +K +L
Sbjct: 235 MQFSGLSPDCVTISSLLAACASLGDLQKGTQL 266
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/576 (34%), Positives = 313/576 (54%), Gaps = 11/576 (1%)
Query: 12 QLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKV 71
++ + ++FS PD + T SLL C ++ +H+++ G S+ + +
Sbjct: 230 EIFEEMQFSGLSPDCV----TISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSL 285
Query: 72 IIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQ 131
+ Y K GDV +A F+ NVV W M+ + Q + +F M +G+R NQ
Sbjct: 286 LDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQ 345
Query: 132 FTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER 191
FTY LR C R + G I K F +++V L+D+Y+K GW+E A + E
Sbjct: 346 FTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEM 405
Query: 192 IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI 251
++ KDVVSW +MI G D+ F+ M + G+ PD L S + G + +
Sbjct: 406 LKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQG 465
Query: 252 SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD 311
QIH I G + +L+++YA+ G IR A+ + + D I+ L+SGFA+
Sbjct: 466 LQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQS 525
Query: 312 DNHSKEAFDLFKDMILKKMGIDDVILCLM--LNICANVASLNLGRQIHAFAFKYQSSYDA 369
H +EA +F M + + G+ + + L+ AN+A + G+QIHA K S++
Sbjct: 526 GLH-EEALKVF--MRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFET 582
Query: 370 AVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE 429
VGNALI +Y K G DA F EM ++N +SW ++I ++HG G EA++L+ +MK E
Sbjct: 583 EVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKE 642
Query: 430 GMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLES 489
G+ PNDVTF+ +L ACSH GL EG F M ++Y I PR +H++CV+D+F R GQL+
Sbjct: 643 GIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDR 702
Query: 490 AYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTA 549
A I +M I A +W +L AC ++ N +GE AA++L ++EP S +YV+LSN Y
Sbjct: 703 AKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAV 762
Query: 550 AGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKNIL 585
W N + RK+M +R +RK PG S+++ KN++
Sbjct: 763 TEKWANRDQVRKMMRDRGVRKEPGRSWIEV--KNVV 796
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 166/508 (32%), Positives = 275/508 (54%), Gaps = 17/508 (3%)
Query: 30 PSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
P+ Y+ S+L C + Q LIHA +G+ S + + VI Y + G A +
Sbjct: 141 PTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERV 200
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F MP R+ V++ +ISG+AQ G+ E+AL +F M SG+ + T SS L ACA + L
Sbjct: 201 FCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDL 260
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
Q G + + K + ++ +LLDLY KCG +E A ++F +R +VV WN M+ +
Sbjct: 261 QKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLML--V 318
Query: 208 AMQGFND--DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
A ND SF LF M G++P+ FT ILR E+ QIH L +K G ES
Sbjct: 319 AFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFES 378
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
++G LID+Y+KYG + A ++ + + D++S T++I+G+ + + K+A FK+M
Sbjct: 379 DMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEC-CKDALAAFKEM 437
Query: 326 ILKKMGI--DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
+K GI D++ L ++ CA + ++ G QIHA + S D ++ NAL+++YA+ G
Sbjct: 438 --QKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCG 495
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
I +A +F+E+ K+ I+W L++G+A+ G EA++++ +M G+ N TF+S L
Sbjct: 496 RIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALS 555
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
A ++ +G ++ +I E + ++ L+ + G E A +M+ +
Sbjct: 556 ASANLAEIKQGKQIHARVIKTGHSF-ETEVGNALISLYGKCGSFEDAKMEFSEMSERNEV 614
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFD 531
S W+ I+ +CS +G L A +LFD
Sbjct: 615 S-WNTIITSCSQHGRG----LEALDLFD 637
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 154/527 (29%), Positives = 272/527 (51%), Gaps = 12/527 (2%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IHA +T G + +I Y+K G VL AR+ F+ + R+ VSW AM+SGYAQNG
Sbjct: 64 IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
E AL ++ M R+GV + SS L +C + GR+I K F +FV +A
Sbjct: 124 GEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNA 183
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
++ LY +CG A +F + +D V++N +I G A G + + +F M G+ PD
Sbjct: 184 VITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPD 243
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
C T+ S+L A +L K +Q+H + K G+ S + GSL+D+Y K G + +A ++
Sbjct: 244 CVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFN 303
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
S +T+++ ++ F + ++ +K +F+LF M + + +L C ++
Sbjct: 304 SSDRTNVVLWNLMLVAFGQINDLAK-SFELFCQMQAAGIRPNQFTYPCILRTCTCTREID 362
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
LG QIH+ + K D V LIDMY+K G + A R + + +K+V+SWTS+IAGY
Sbjct: 363 LGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYV 422
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM-INKYRILPR 470
+H +A+ +K+M+ G+ P+++ S + C+ +G ++ + ++ Y
Sbjct: 423 QHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYS--GD 480
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
++ +V+L+AR G++ A++ ++ K + W+ G S + + L E A +
Sbjct: 481 VSIWNALVNLYARCGRIREAFSSFEEIEHKDEIT-WN---GLVSGFAQSGLHEEALKVFM 536
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNAR-KTRKLMEERSLRKNPGYSF 576
M+ + V + V + + + + + A K K + R ++ G+SF
Sbjct: 537 RMD-QSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKT--GHSF 580
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 198/431 (45%), Gaps = 21/431 (4%)
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA--RMRWLQ 148
M R S ++G+ + L +F+ R ++ ALRAC RW
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 149 GGRMIQGSIQKG----RFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
+ ++ +G R V NL L+DLY+K G + A +FE + +D VSW AM+
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNL-----LIDLYSKNGLVLPARRVFEELSARDNVSWVAML 115
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G A G +++ L+R M R G+ P + L S+L + + IH K G
Sbjct: 116 SGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFC 175
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
S + ++I +Y + GS R A +++ M D ++ LISG A+ H + A ++F++
Sbjct: 176 SEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQ-CGHGEHALEIFEE 234
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M + D V + +L CA++ L G Q+H++ FK S D + +L+D+Y K G+
Sbjct: 235 MQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGD 294
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ A F+ NV+ W ++ + + ++ EL+ +M+ G+ PN T+ +L
Sbjct: 295 VETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRT 354
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEH----FSCVVDLFARRGQLESAYNMIRQMNIK 500
C TC + I+ + E ++D++++ G LE A ++ + K
Sbjct: 355 C-----TCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK 409
Query: 501 PTASLWSAILG 511
S S I G
Sbjct: 410 DVVSWTSMIAG 420
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 183/397 (46%), Gaps = 60/397 (15%)
Query: 219 LFRSMMRQ--GMKPDCFTLGSILRASVG-GIELMKISQIHDLIIKLGLESSNKLTGSLID 275
LF RQ G+ P LRA G G + +IH + GL + LID
Sbjct: 28 LFADKARQHGGLGP--LDFACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLID 85
Query: 276 VYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDV 335
+Y+K G + A +++ + D +S A++SG+A+ + +EA L++ M +
Sbjct: 86 LYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ-NGLGEEALGLYRQMHRAGVVPTPY 144
Query: 336 ILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEM 395
+L +L+ C GR IHA +K+ + VGNA+I +Y + G A R F +M
Sbjct: 145 VLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDM 204
Query: 396 GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGW 455
++ +++ +LI+G+A+ G+G A+E++++M+ G+ P+ VT SLL AC+ G +G
Sbjct: 205 PHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGT 264
Query: 456 E----LFTDMINKYRILPRAEHFSCVVDLFARRGQLESA--------------------- 490
+ LF I+ I+ ++DL+ + G +E+A
Sbjct: 265 QLHSYLFKAGISSDYIME-----GSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVA 319
Query: 491 ----------YNMIRQMN---IKPTASLWSAILGACSIYGNTSLGE----LAARNLFDME 533
+ + QM I+P + IL C+ LGE L+ + F+
Sbjct: 320 FGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFE-- 377
Query: 534 PEKSVNYV--VLSNIYTAAGAWDNARKTRKLMEERSL 568
S YV VL ++Y+ G + AR+ ++++E+ +
Sbjct: 378 ---SDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDV 411
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 123/272 (45%), Gaps = 8/272 (2%)
Query: 293 MLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNIC-ANVASLN 351
M + S ++GF ++ +K LF D + G+ + L C N
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAK-VLSLFADKARQHGGLGPLDFACALRACRGNGRRWQ 59
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
+ +IHA A VGN LID+Y+K+G + A R F+E+ ++ +SW ++++GYA
Sbjct: 60 VVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYA 119
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
++G G EA+ LY++M G+VP S+L +C+ L +G L K+
Sbjct: 120 QNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQG-RLIHAQGYKHGFCSEI 178
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
+ V+ L+ R G A + M + T + + I G + GE A +
Sbjct: 179 FVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISG----HAQCGHGEHALEIFEE 234
Query: 532 MEPEK-SVNYVVLSNIYTAAGAWDNARKTRKL 562
M+ S + V +S++ A + + +K +L
Sbjct: 235 MQFSGLSPDCVTISSLLAACASLGDLQKGTQL 266
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/528 (35%), Positives = 309/528 (58%), Gaps = 2/528 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H I+ +G+ + ++ FY K V SARK FD M ER+V+SW ++I+GY NG
Sbjct: 217 LHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGL 276
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
E L VF ML SG+ + T S CA R + GR + K F +
Sbjct: 277 AEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNT 336
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
LLD+Y+KCG ++ A +F + + VVS+ +MI G A +G ++ LF M +G+ PD
Sbjct: 337 LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPD 396
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
+T+ ++L L + ++H+ I + L ++ +L+D+YAK GS++ A ++
Sbjct: 397 VYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFS 456
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL-KKMGIDDVILCLMLNICANVASL 350
M DIIS +I G++++ ++ EA LF ++ K+ D+ + +L CA++++
Sbjct: 457 EMRVKDIISWNTIIGGYSKN-CYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAF 515
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
+ GR+IH + + D V N+L+DMYAK G + A+ FD++ K+++SWT +IAGY
Sbjct: 516 DKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGY 575
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
HG+G EAI L+ +M+ G+ ++++F+SLL+ACSH+GL EGW F M ++ +I P
Sbjct: 576 GMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPT 635
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
EH++C+VD+ AR G L AY I M I P A++W A+L C I+ + L E A +F
Sbjct: 636 VEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVF 695
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
++EPE + YV+++NIY A W+ ++ RK + +R LRKNPG S+++
Sbjct: 696 ELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIE 743
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 141/511 (27%), Positives = 266/511 (52%), Gaps = 6/511 (1%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLS 68
++G L+ A+K +DP T S+LQ C D K+ + + I NG+ + +L
Sbjct: 73 ESGNLENAVKLLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLG 132
Query: 69 TKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR 128
+K+ + Y GD+ A + FD + + W +++ A++G ++ +F M+ SGV
Sbjct: 133 SKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVE 192
Query: 129 ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWIL 188
+ +T+S ++ + +R + GG + G I K F E V ++L+ Y K ++ A +
Sbjct: 193 MDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKV 252
Query: 189 FERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIEL 248
F+ + +DV+SWN++I G G + +F M+ G++ D T+ S+ A L
Sbjct: 253 FDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVF-AGCADSRL 311
Query: 249 MKISQ-IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG 307
+ + + +H + +K ++ +L+D+Y+K G + SA ++R M ++S T++I+G
Sbjct: 312 ISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAG 371
Query: 308 FARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSY 367
+AR + + EA LF++M + + D + +LN CA L+ G+++H + + +
Sbjct: 372 YAR-EGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF 430
Query: 368 DAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMK 427
D V NAL+DMYAK G + +A F EM K++ISW ++I GY+K+ Y +EA+ L+ +
Sbjct: 431 DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLL 490
Query: 428 HEG-MVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
E P++ T +L AC+ +G E+ ++ R S +VD++A+ G
Sbjct: 491 EEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS-LVDMYAKCGA 549
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYG 517
L A+ + + K S W+ ++ ++G
Sbjct: 550 LLLAHMLFDDIASKDLVS-WTVMIAGYGMHG 579
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 202/390 (51%), Gaps = 6/390 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D +T +S+ C D + +H+ + + ++ Y+K GD+ SA+
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 353
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F M +R+VVS+T+MI+GYA+ G A+ +F M G+ + +T ++ L CAR R L
Sbjct: 354 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLL 413
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ + I++ ++FV +AL+D+YAKCG +++A ++F + KD++SWN +IGG
Sbjct: 414 DEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGY 473
Query: 208 AMQGFNDDSFWLFRSMMRQG-MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
+ + +++ LF ++ + PD T+ +L A K +IH I++ G S
Sbjct: 474 SKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSD 533
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ SL+D+YAK G++ A+ L+ + D++S T +I+G+ KEA LF M
Sbjct: 534 RHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGM-HGFGKEAIALFNQMR 592
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN--ALIDMYAKSGE 384
+ D++ +L C++ ++ G + +++ + V + ++DM A++G+
Sbjct: 593 QAGIEADEISFVSLLYACSHSGLVDEGWRFFNI-MRHECKIEPTVEHYACIVDMLARTGD 651
Query: 385 IADANRAFDEMG-DKNVISWTSLIAGYAKH 413
+ A R + M + W +L+ G H
Sbjct: 652 LIKAYRFIENMPIPPDATIWGALLCGCRIH 681
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/548 (34%), Positives = 320/548 (58%), Gaps = 1/548 (0%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
S Y SL + C A R +H+H + + + S++ + T + YAK G + A+K
Sbjct: 283 SIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSS 342
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
MP+ ++ S+ A+I GYA++ AL F +L++G+ ++ T S AL ACA +R G
Sbjct: 343 MPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEG 402
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
R + G K + N+ V +A+LD+Y KC + +A LF+ +ER+D VSWNA+I
Sbjct: 403 RQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQN 462
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
G +++ F SM+ M+PD FT GS+L+A G L +IH IIK G+ + +
Sbjct: 463 GNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVG 522
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
+L+D+Y K G I A +++ + ++S A+ISGF+ S++A F M+ +
Sbjct: 523 AALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLL-QQSEDAHKFFSRMLEMGV 581
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
D+ +L+ CAN+A++ LG+QIHA K + D + + L+DMY+K G + D+
Sbjct: 582 NPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQL 641
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
F++ +++ ++W +++ GYA HG G EA++L++ M+ + PN TF+S+L AC+H GL
Sbjct: 642 MFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGL 701
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
+G F M+++Y + P++EH+SC+VD+ R G+++ A N++++M + A +W +L
Sbjct: 702 VDKGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLL 761
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
C I+GN + E A R L ++P+ S V+LSNIY AG W N + RK+M L+K
Sbjct: 762 SVCKIHGNVEVAEKATRALLQLDPQDSSACVLLSNIYADAGMWGNVSEMRKMMRHNKLKK 821
Query: 571 NPGYSFLQ 578
PG S+++
Sbjct: 822 EPGCSWIE 829
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 141/450 (31%), Positives = 228/450 (50%), Gaps = 13/450 (2%)
Query: 71 VIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
+I YA G++ ARK F MPER+VVSW ++ISG+ QNG ++ VF M R GV +
Sbjct: 121 IISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFD 180
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE 190
+ + + L+AC + G + G + K F ++ SALL +YAKC ++D+ +F
Sbjct: 181 RASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFS 240
Query: 191 RIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMK 250
+ K+ VSW+AMI G N + LF+ M G+ S+ R+ L
Sbjct: 241 ELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRL 300
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR 310
++H +K S + + +D+YAK G + A ++ SM K + S A+I G+AR
Sbjct: 301 GKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYAR 360
Query: 311 DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA 370
D +A F+ ++ +G D++ L LN CA++ GRQ+H A K S +
Sbjct: 361 SD-RGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNIC 419
Query: 371 VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG 430
V NA++DMY K +A+A+ FD M ++ +SW ++IA ++G E + + M H
Sbjct: 420 VANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSR 479
Query: 431 MVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF-----SCVVDLFARRG 485
M P+D T+ S+L AC+ G E+ T RI+ F + +VD++ + G
Sbjct: 480 MEPDDFTYGSVLKACAGRQALNTGMEIHT------RIIKSGMGFDSFVGAALVDMYCKCG 533
Query: 486 QLESAYNMIRQMNIKPTASLWSAILGACSI 515
+E A + I + T W+AI+ S+
Sbjct: 534 MIEKA-DKIHDRTEQKTMVSWNAIISGFSL 562
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/497 (26%), Positives = 247/497 (49%), Gaps = 11/497 (2%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H ++ G++ ++ + ++ YAK + + F +PE+N VSW+AMI+G QN
Sbjct: 203 VHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDR 262
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ L +F M GV +Q Y+S R+CA + L+ G+ + K F ++ V +A
Sbjct: 263 NVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTA 322
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
LD+YAKCG + DA + + + + S+NA+I G A + F+ +++ G+ D
Sbjct: 323 TLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFD 382
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
TL L A ++ Q+H L +K S+ + +++D+Y K ++ A L+
Sbjct: 383 EITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFD 442
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
M + D +S A+I+ ++ N +E F MI +M DD +L CA +LN
Sbjct: 443 MMERRDAVSWNAIIAACEQNGNE-EETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALN 501
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
G +IH K +D+ VG AL+DMY K G I A++ D K ++SW ++I+G++
Sbjct: 502 TGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFS 561
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
+A + + +M G+ P++ T+ ++L C++ G ++ +I K +
Sbjct: 562 LLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQII-KQELQSDV 620
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAAR---- 527
S +VD++++ G ++ + M + + + W+A+L Y + LGE A +
Sbjct: 621 YICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVT-WNAMLCG---YAHHGLGEEALKLFES 676
Query: 528 -NLFDMEPEKSVNYVVL 543
L +++P + VL
Sbjct: 677 MQLVNVKPNHATFVSVL 693
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 200/393 (50%), Gaps = 11/393 (2%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
D T L C + + + +H + + SN+ ++ ++ Y K + A
Sbjct: 381 FDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDL 440
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD M R+ VSW A+I+ QNG +E L F++M+ S + + FTY S L+ACA + L
Sbjct: 441 FDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQAL 500
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G I I K + FV +AL+D+Y KCG IE A + +R E+K +VSWNA+I G
Sbjct: 501 NTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGF 560
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLES 265
++ ++D+ F M+ G+ PD FT ++L A++ + L K QIH IIK L+S
Sbjct: 561 SLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGK--QIHAQIIKQELQS 618
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ +L+D+Y+K G+++ + ++ D ++ A++ G+A +EA LF+ M
Sbjct: 619 DVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAH-HGLGEEALKLFESM 677
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF---KYQSSYDAAVGNALIDMYAKS 382
L + + +L CA++ ++ G +H F +Y + + ++D+ +S
Sbjct: 678 QLVNVKPNHATFVSVLRACAHMGLVDKG--LHYFDVMLSEYGLDPQSEHYSCMVDILGRS 735
Query: 383 GEIADANRAFDEMG-DKNVISWTSLIAGYAKHG 414
G I +A +M + + + W +L++ HG
Sbjct: 736 GRIDEALNLVQKMPFEADAVIWRNLLSVCKIHG 768
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 153/294 (52%), Gaps = 3/294 (1%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNG 60
I+ A + G ++ L S + ++P TY S+L+ C ++A IH II +G
Sbjct: 455 IIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSG 514
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+ + ++ Y K G + A K DR ++ +VSW A+ISG++ E+A FS
Sbjct: 515 MGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFS 574
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
ML GV + FTY++ L CA + + G+ I I K ++++ S L+D+Y+KCG
Sbjct: 575 RMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCG 634
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
++D+ ++FE+ +D V+WNAM+ G A G +++ LF SM +KP+ T S+LR
Sbjct: 635 NMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLR 694
Query: 241 ASVG-GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
A G+ + ++ + GL+ ++ ++D+ + G I A L + M
Sbjct: 695 ACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKM 748
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 208/437 (47%), Gaps = 38/437 (8%)
Query: 133 TYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI 192
T+S + C++ L G+ + F FV + L+ +Y KC +++ A +F+++
Sbjct: 51 TFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110
Query: 193 ERKDVVSWNAMIGGLAMQGFND-------------------------------DSFWLFR 221
+DVVS+N++I G A G D S +F
Sbjct: 111 YLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFL 170
Query: 222 SMMRQGMKPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLGLESSNKLTGSLIDVYAKY 280
M R G+ D +L +L+A G +E + Q+H L++K G + +L+ +YAK
Sbjct: 171 EMGRCGVGFDRASLAVVLKA-CGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKC 229
Query: 281 GSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLM 340
+ + ++ + + + +S +A+I+G ++D + E +LFK+M +G+ I +
Sbjct: 230 KRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNV-EGLELFKEMQGVGVGVSQSIYASL 288
Query: 341 LNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNV 400
CA +++L LG+++H+ A K D VG A +DMYAK G +ADA + M ++
Sbjct: 289 FRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSL 348
Query: 401 ISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTD 460
S+ ++I GYA+ G +A++ ++ + G+ +++T L AC+ EG ++
Sbjct: 349 QSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVH-G 407
Query: 461 MINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN-- 518
+ K + + ++D++ + L A ++ M + S W+AI+ AC GN
Sbjct: 408 LAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVS-WNAIIAACEQNGNEE 466
Query: 519 TSLGELAARNLFDMEPE 535
+L A+ MEP+
Sbjct: 467 ETLAHFASMIHSRMEPD 483
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/528 (35%), Positives = 309/528 (58%), Gaps = 2/528 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H I+ +G+ + ++ FY K V SARK FD M ER+V+SW ++I+GY NG
Sbjct: 66 LHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGL 125
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
E L VF ML SG+ + T S CA R + GR + K F +
Sbjct: 126 AEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNT 185
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
LLD+Y+KCG ++ A +F + + VVS+ +MI G A +G ++ LF M +G+ PD
Sbjct: 186 LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPD 245
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
+T+ ++L L + ++H+ I + L ++ +L+D+YAK GS++ A ++
Sbjct: 246 VYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFS 305
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL-KKMGIDDVILCLMLNICANVASL 350
M DIIS +I G++++ ++ EA LF ++ K+ D+ + +L CA++++
Sbjct: 306 EMRVKDIISWNTIIGGYSKN-CYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAF 364
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
+ GR+IH + + D V N+L+DMYAK G + A+ FD++ K+++SWT +IAGY
Sbjct: 365 DKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGY 424
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
HG+G EAI L+ +M+ G+ ++++F+SLL+ACSH+GL EGW F M ++ +I P
Sbjct: 425 GMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPT 484
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
EH++C+VD+ AR G L AY I M I P A++W A+L C I+ + L E A +F
Sbjct: 485 VEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVF 544
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
++EPE + YV+++NIY A W+ ++ RK + +R LRKNPG S+++
Sbjct: 545 ELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIE 592
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 227/432 (52%), Gaps = 6/432 (1%)
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD + + W +++ A++G ++ +F M+ SGV + +T+S ++ + +R +
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
GG + G I K F E V ++L+ Y K ++ A +F+ + +DV+SWN++I G
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESS 266
G + +F M+ G++ D T+ S+ A L+ + + +H + +K
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVF-AGCADSRLISLGRAVHSIGVKACFSRE 179
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
++ +L+D+Y+K G + SA ++R M ++S T++I+G+AR + + EA LF++M
Sbjct: 180 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAR-EGLAGEAVKLFEEME 238
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ + D + +LN CA L+ G+++H + + +D V NAL+DMYAK G +
Sbjct: 239 EEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQ 298
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG-MVPNDVTFLSLLFAC 445
+A F EM K++ISW ++I GY+K+ Y +EA+ L+ + E P++ T +L AC
Sbjct: 299 EAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPAC 358
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
+ +G E+ ++ R S +VD++A+ G L A+ + + K S
Sbjct: 359 ASLSAFDKGREIHGYIMRNGYFSDRHVANS-LVDMYAKCGALLLAHMLFDDIASKDLVS- 416
Query: 506 WSAILGACSIYG 517
W+ ++ ++G
Sbjct: 417 WTVMIAGYGMHG 428
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 202/390 (51%), Gaps = 6/390 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D +T +S+ C D + +H+ + + ++ Y+K GD+ SA+
Sbjct: 143 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 202
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F M +R+VVS+T+MI+GYA+ G A+ +F M G+ + +T ++ L CAR R L
Sbjct: 203 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLL 262
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ + I++ ++FV +AL+D+YAKCG +++A ++F + KD++SWN +IGG
Sbjct: 263 DEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGY 322
Query: 208 AMQGFNDDSFWLFRSMMRQG-MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
+ + +++ LF ++ + PD T+ +L A K +IH I++ G S
Sbjct: 323 SKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSD 382
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ SL+D+YAK G++ A+ L+ + D++S T +I+G+ KEA LF M
Sbjct: 383 RHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGM-HGFGKEAIALFNQMR 441
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN--ALIDMYAKSGE 384
+ D++ +L C++ ++ G + +++ + V + ++DM A++G+
Sbjct: 442 QAGIEADEISFVSLLYACSHSGLVDEGWRFFNI-MRHECKIEPTVEHYACIVDMLARTGD 500
Query: 385 IADANRAFDEMG-DKNVISWTSLIAGYAKH 413
+ A R + M + W +L+ G H
Sbjct: 501 LIKAYRFIENMPIPPDATIWGALLCGCRIH 530
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/552 (38%), Positives = 308/552 (55%), Gaps = 5/552 (0%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
S Y SL+ + +R IH ++ +G + N L TK++ + +G + ARK FD
Sbjct: 57 SFYASLID---NSTHKRHLDQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDE 113
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+V W A+I Y++N + + ++ M +GV + FT+ L+AC +
Sbjct: 114 FCYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLS 173
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+I G I K F ++FV++ L+ LYAKCG I A ++F+ + + +VSW ++I G A
Sbjct: 174 CIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQN 233
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
G ++ +F M G+KPD L SILRA +L + IH +IK+GLE L
Sbjct: 234 GKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALL 293
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
SL YAK G + A + M T++I A+ISG+A+ + H++EA +LF MI + +
Sbjct: 294 ISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAK-NGHAEEAVNLFHYMISRNI 352
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
D V + + A V SL L + + + K D V +LIDMYAK G + A R
Sbjct: 353 KPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARR 412
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
FD DK+V+ W+++I GY HG G EAI LY MK G+ PNDVTF+ LL AC+H+GL
Sbjct: 413 VFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGL 472
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
EGWELF M + I+PR EH+SCVVDL R G L A I ++ I+P S+W A+L
Sbjct: 473 VKEGWELFHCM-KDFEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALL 531
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
AC IY +LGE AA LF ++P + +YV LSN+Y ++ WD R LM E+ L K
Sbjct: 532 SACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNK 591
Query: 571 NPGYSFLQSSKK 582
+ GYS ++ + K
Sbjct: 592 DLGYSVIEINGK 603
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 188/364 (51%), Gaps = 9/364 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ +L+ C + + +IH II G+ S++ + ++ YAK G + A+ F
Sbjct: 153 DGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVF 212
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D + R +VSWT++ISGYAQNG AL +FS M +GV+ + S LRA + L+
Sbjct: 213 DGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLE 272
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
GR I G + K + + +L YAKCG + A F++++ +V+ WNAMI G A
Sbjct: 273 QGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYA 332
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS--VGGIELMKISQIHDLIIKLGLESS 266
G +++ LF M+ + +KPD T+ S + AS VG +EL + + D + K S
Sbjct: 333 KNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQ--WMDDYVSKSNYGSD 390
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ SLID+YAK GS+ A +++ D++ +A+I G+ EA +L+ +
Sbjct: 391 IFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGL-HGQGWEAINLYH--V 447
Query: 327 LKKMGI--DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
+K+ G+ +DV +L C + + G ++ ++ + ++D+ ++G
Sbjct: 448 MKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMKDFEIVPRNEHYSCVVDLLGRAGY 507
Query: 385 IADA 388
+ +A
Sbjct: 508 LGEA 511
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/550 (36%), Positives = 319/550 (58%), Gaps = 7/550 (1%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
S Y SL+ K RQ IHA ++ G + + L TK+I + GD+ AR+ FD
Sbjct: 22 SFYASLIDSSTHKAQLRQ---IHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDD 78
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+P V W A+I GY++N + ++ALL++S M + V + FT+ L+AC + LQ G
Sbjct: 79 LPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMG 138
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE--RIERKDVVSWNAMIGGLA 208
R + + + F ++FV++ L+ LYAKC + A +FE + + +VSW A++ A
Sbjct: 139 RFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYA 198
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G ++ +F M + +KPDC L S+L A +L + IH ++K+GLE+
Sbjct: 199 QNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPD 258
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
L SL +YAK G + +A L+ M ++I A+ISG+A++ +K+A DLF +MI K
Sbjct: 259 LLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKN-GFAKDAIDLFHEMINK 317
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ D + + ++ CA V SL R + + + D + +ALIDM+AK G + A
Sbjct: 318 DVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECA 377
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
FD D++V+ W+++I GY HG EAI LY+ M+ +G+ PNDVTFL LL AC+H+
Sbjct: 378 RSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHS 437
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
G+ EGW F M + ++I P+ +H++C++DL R G L+ AY +I+ M ++P ++W A
Sbjct: 438 GMVREGWWFFNRMAD-HKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGA 496
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L AC + + LG+ AA+ LF ++P + +YV LSN+Y AA WD + R M+E+ L
Sbjct: 497 LLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGL 556
Query: 569 RKNPGYSFLQ 578
K+ G S+++
Sbjct: 557 NKDVGCSWVE 566
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 198/420 (47%), Gaps = 14/420 (3%)
Query: 3 IVRANFKTGQLKQAL------KFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHI 56
I+R + + AL + + PD+ T+ LL+ C + +HA +
Sbjct: 90 IIRGYSRNNHFQDALLMYSKMQLARVSPDSF----TFPHLLKACGGLSHLQMGRFVHAQV 145
Query: 57 ITNGYESNLHLSTKVIIFYAKVGDVLSARKAFD--RMPERNVVSWTAMISGYAQNGYDEN 114
G+E+++ + +I YAK + AR F+ +PER +VSWTA++S YAQNG
Sbjct: 146 FRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVE 205
Query: 115 ALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLD 174
AL +FS M + V+ + S L A ++ L+ GR I S+ K + +L
Sbjct: 206 ALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNT 265
Query: 175 LYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFT 234
+YAKCG + A ILF++++ +++ WNAMI G A GF D+ LF M+ + ++PD +
Sbjct: 266 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTIS 325
Query: 235 LGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML 294
+ S + A L + + + + + ++ +LID++AK GS+ A ++ L
Sbjct: 326 ITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTL 385
Query: 295 KTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGR 354
D++ +A+I G+ ++EA L++ M + +DV +L C + + G
Sbjct: 386 DRDVVVWSAMIVGYGL-HGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGW 444
Query: 355 QIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKH 413
++ + +ID+ ++G + A M V W +L++ KH
Sbjct: 445 WFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/550 (36%), Positives = 315/550 (57%), Gaps = 3/550 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ +L+ C + IH H+I G+ES++ + +I Y K GDV +AR F
Sbjct: 206 DVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVF 265
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D+MP R+ +SW AMISGY +NG L +F M++ V + T +S + AC + +
Sbjct: 266 DKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDR 325
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
GR I G + + F + + ++L+ +Y+ G IE+A +F R E +D+VSW AMI G
Sbjct: 326 LGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYE 385
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
+ ++ M +G+ PD T+ +L A L +H++ + GL S +
Sbjct: 386 NCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSI 445
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ SLID+YAK I A +++ S L+ +I+S T++I G R +N EA F++MI +
Sbjct: 446 VANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGL-RINNRCFEALFFFREMI-R 503
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
++ + V L +L+ CA + +L G++IHA A + S+D + NA++DMY + G + A
Sbjct: 504 RLKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYA 563
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ F + D V SW L+ GYA+ G G A EL+++M + PN+VTF+S+L ACS +
Sbjct: 564 WKQFFSV-DHEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSRS 622
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
G+ EG E F M KY I+P +H++CVVDL R G+LE AY I++M +KP ++W A
Sbjct: 623 GMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGA 682
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L +C I+ + LGELAA N+F + Y++LSN+Y G WD + RK+M + L
Sbjct: 683 LLNSCRIHHHVELGELAAENIFQDDTTSVGYYILLSNLYADNGKWDKVAEVRKMMRQNGL 742
Query: 569 RKNPGYSFLQ 578
+PG S+++
Sbjct: 743 IVDPGCSWVE 752
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 137/490 (27%), Positives = 259/490 (52%), Gaps = 19/490 (3%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
++ Y++L++ C K+A ++ +++++ + +L L ++ + + G+++ A
Sbjct: 104 VEDDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYV 163
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F RM +RN+ SW ++ GYA+ G + AL ++ ML GV+ + +T+ LR C M L
Sbjct: 164 FGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNL 223
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
GR I + + F ++ V +AL+ +Y KCG + A ++F+++ +D +SWNAMI G
Sbjct: 224 VRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGY 283
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS--VGGIELMKISQIHDLIIKLGLES 265
G + LF M++ + PD T+ S++ A +G L + QIH +++
Sbjct: 284 FENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGR--QIHGYVLRTEFGR 341
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ SLI +Y+ G I A ++ D++S TA+ISG+ + ++A + +K M
Sbjct: 342 DPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGY-ENCLMPQKALETYKMM 400
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ + D++ + ++L+ C+ + +L++G +H A + + V N+LIDMYAK I
Sbjct: 401 EAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCI 460
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A F +KN++SWTS+I G + EA+ +++M + PN VT + +L AC
Sbjct: 461 DKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIRR-LKPNSVTLVCVLSAC 519
Query: 446 SHTG-LTCEGWELFTDMINKY----RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIK 500
+ G LTC G E+ + +P A ++D++ R G++E A+ ++ +
Sbjct: 520 ARIGALTC-GKEIHAHALRTGVSFDGFMPNA-----ILDMYVRCGRMEYAWKQFFSVDHE 573
Query: 501 PTASLWSAIL 510
T+ W+ +L
Sbjct: 574 VTS--WNILL 581
>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera]
gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/552 (34%), Positives = 318/552 (57%), Gaps = 3/552 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY +++ C D LIHA + +G++S+ + ++ Y G++ AR+ F
Sbjct: 122 DNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVF 181
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D M ER +VSW MI+GY +NG + AL+VF M+ G+ + T S L C+ ++ L+
Sbjct: 182 DLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELE 241
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
GR + ++ E++ V ++LLD+YAKCG +++A ++F ++++DVVSW M+ G
Sbjct: 242 VGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYI 301
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
+ G + L + M + +KP+ TL S+L A L +H I+ LES
Sbjct: 302 LNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVI 361
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +LID+YAK ++ +++++ K A+ISG + S++A +LFK M+++
Sbjct: 362 VETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHN-GLSRKAIELFKQMLME 420
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ +D L +L A + L R +H + + V LID+Y+K G + A
Sbjct: 421 AVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESA 480
Query: 389 NRAFDEMG--DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
+ F+ + DK++I+W+++IAGY HG+G AI L+ +M G+ PN++TF S+L ACS
Sbjct: 481 HNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACS 540
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
H GL EG LF M+ ++ R +H++CV+DL R G+LE AY +IR M +P ++W
Sbjct: 541 HAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVW 600
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
A+LG+C I+ N LGE+AA+ LF++EP + NYV+L+NIY+A G W +A R +M
Sbjct: 601 GALLGSCVIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNI 660
Query: 567 SLRKNPGYSFLQ 578
LRK P +S ++
Sbjct: 661 GLRKTPAHSLIE 672
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 172/552 (31%), Positives = 279/552 (50%), Gaps = 34/552 (6%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNL---HLSTKVIIFYAKVGDVLSARKAFD 89
Y SLLQ C +K+ IHAH IT G S+ HL + + YA G ARK FD
Sbjct: 21 YQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFD 80
Query: 90 RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR-ANQFTYSSALRACARMRWLQ 148
+ ++ SW AMI Y +G +AL +F ML SG R + +TY ++AC +
Sbjct: 81 ELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPE 140
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G +I F + FV+++L+ +Y CG +E A +F+ + + +VSWN MI G
Sbjct: 141 MGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYF 200
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G ++ +F M+ +G++PDC T+ S+L EL ++H L+ L
Sbjct: 201 KNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDIS 260
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ SL+D+YAK G++ A ++ M K D++S T +++G+ + + ++ A L + M +
Sbjct: 261 VWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGD-ARSALLLCQMMQFE 319
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ + V L +L+ CA++ SL GR +H +A + + + V ALIDMYAK + +
Sbjct: 320 SVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLS 379
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
R F + + W ++I+G +G +AIEL+K+M E + PND T SLL A
Sbjct: 380 FRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPA---- 435
Query: 449 GLTCEGWELFTDM-----INKYRI----LPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
+ TD+ ++ Y I L R E + ++D++++ G LESA+N+ +
Sbjct: 436 ------YAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPK 489
Query: 500 KPTASL-WSAILGACSIYGNTSLGELAARNLFDMEPEKSV--NYVVLSNIYTA---AGAW 553
K + WSAI+ ++G+ GE A +LFD + V N + ++I A AG
Sbjct: 490 KDKDIITWSAIIAGYGMHGH---GETAI-SLFDQMVQSGVKPNEITFTSILHACSHAGLV 545
Query: 554 DNARKTRKLMEE 565
D K M E
Sbjct: 546 DEGLGLFKFMLE 557
>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/552 (34%), Positives = 318/552 (57%), Gaps = 3/552 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY +++ C D LIHA + +G++S+ + ++ Y G++ AR+ F
Sbjct: 122 DNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVF 181
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D M ER +VSW MI+GY +NG + AL+VF M+ G+ + T S L C+ ++ L+
Sbjct: 182 DLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELE 241
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
GR + ++ E++ V ++LLD+YAKCG +++A ++F ++++DVVSW M+ G
Sbjct: 242 VGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYI 301
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
+ G + L + M + +KP+ TL S+L A L +H I+ LES
Sbjct: 302 LNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVI 361
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +LID+YAK ++ +++++ K A+ISG + S++A +LFK M+++
Sbjct: 362 VETALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHN-GLSRKAIELFKQMLME 420
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ +D L +L A + L R +H + + V LID+Y+K G + A
Sbjct: 421 AVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESA 480
Query: 389 NRAFDEMG--DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
+ F+ + DK++I+W+++IAGY HG+G AI L+ +M G+ PN++TF S+L ACS
Sbjct: 481 HNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACS 540
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
H GL EG LF M+ ++ R +H++CV+DL R G+LE AY +IR M +P ++W
Sbjct: 541 HAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVW 600
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
A+LG+C I+ N LGE+AA+ LF++EP + NYV+L+NIY+A G W +A R +M
Sbjct: 601 GALLGSCVIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNI 660
Query: 567 SLRKNPGYSFLQ 578
LRK P +S ++
Sbjct: 661 GLRKTPAHSLIE 672
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 172/552 (31%), Positives = 279/552 (50%), Gaps = 34/552 (6%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNL---HLSTKVIIFYAKVGDVLSARKAFD 89
Y SLLQ C +K+ IHAH IT G S+ HL + + YA G ARK FD
Sbjct: 21 YQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFD 80
Query: 90 RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR-ANQFTYSSALRACARMRWLQ 148
+ ++ SW AMI Y +G +AL +F ML SG R + +TY ++AC +
Sbjct: 81 ELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPE 140
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G +I F + FV+++L+ +Y CG +E A +F+ + + +VSWN MI G
Sbjct: 141 MGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYF 200
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G ++ +F M+ +G++PDC T+ S+L EL ++H L+ L
Sbjct: 201 KNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDIS 260
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ SL+D+YAK G++ A ++ M K D++S T +++G+ + + ++ A L + M +
Sbjct: 261 VWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGD-ARSALLLCQMMQFE 319
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ + V L +L+ CA++ SL GR +H +A + + + V ALIDMYAK + +
Sbjct: 320 SVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLS 379
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
R F + + W ++I+G +G +AIEL+K+M E + PND T SLL A
Sbjct: 380 FRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPA---- 435
Query: 449 GLTCEGWELFTDM-----INKYRI----LPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
+ TD+ ++ Y I L R E + ++D++++ G LESA+N+ +
Sbjct: 436 ------YAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPK 489
Query: 500 KPTASL-WSAILGACSIYGNTSLGELAARNLFDMEPEKSV--NYVVLSNIYTA---AGAW 553
K + WSAI+ ++G+ GE A +LFD + V N + ++I A AG
Sbjct: 490 KDKDIITWSAIIAGYGMHGH---GETAI-SLFDQMVQSGVKPNEITFTSILHACSHAGLV 545
Query: 554 DNARKTRKLMEE 565
D K M E
Sbjct: 546 DEGLGLFKFMLE 557
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/613 (34%), Positives = 336/613 (54%), Gaps = 44/613 (7%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDP--STYMSLLQFCIDKKAERQAHLIHAHIITNG 60
+V++ K G+L++AL + + P STY SLLQ C++ K+ A L+HAH+I
Sbjct: 35 LVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQ 94
Query: 61 YE-SNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
+E ++ L K++ Y K+G ++ AR+ FD MP +NVVSWTAMI+ YA++ + + AL F
Sbjct: 95 FECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFF 154
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
M G++ N FT++S L AC + L I KG F N+FV + L+D+YAK
Sbjct: 155 YEMQDVGIQPNHFTFASILPACTDLEVLG---EFHDEIVKGGFESNVFVGNGLVDMYAKR 211
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G IE A LF+++ ++DVVSWNAMI G G +D+ LF+ + ++ D T +++
Sbjct: 212 GCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKR----DVITWNTMM 267
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
++ ++ + + + L S N ++I Y + GS++ A++L++ M + ++I
Sbjct: 268 AGYAQCGDVENAVELFEKMPEQNLVSWN----TMIAGYVQNGSVKEAFKLFQIMPERNVI 323
Query: 300 SCTALISGFARD------------------------------DNHSKEAFDLFKDMILKK 329
S A+ISGFA++ + ++ A LF M +
Sbjct: 324 SWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVD 383
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
M + ++L CA +A L G + H + D VGN L+ MYAK G I DA
Sbjct: 384 MKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDAR 443
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
+ FD M ++ S +++I GYA +G E++EL+++M+ G+ P+ VTF+ +L AC H G
Sbjct: 444 KVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAG 503
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
L EG + F M Y I P EH+ C++DL R G + A ++I +M IKP A +W ++
Sbjct: 504 LVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSL 563
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
L AC + N LGE A++L + P+ YV+LSNIY AAG WD+ R M++R ++
Sbjct: 564 LSACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGSVRNRMKDRKVK 623
Query: 570 KNPGYSFLQSSKK 582
K G S++ K+
Sbjct: 624 KKLGCSWIVIKKQ 636
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 370 bits (951), Expect = e-99, Method: Compositional matrix adjust.
Identities = 197/571 (34%), Positives = 326/571 (57%), Gaps = 3/571 (0%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K G A + T +P+ T+ +L C + +H ++++G E +
Sbjct: 225 KNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSP 284
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
++ ++ YAK G + AR+ FD MP+ ++V+W MISGY QNG+ + A +F M+ +
Sbjct: 285 VANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISAR 344
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
++ + T+SS L + L+ G+ I I + ++F+KSAL+D+Y KC +E A
Sbjct: 345 MKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMAR 404
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+F++ D+V AMI G + G N+++ +FR ++++ M+ + TL S+L A G
Sbjct: 405 KIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLA 464
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
L ++H I+K G S + +++D+YAK G + A+Q + + D + ++I+
Sbjct: 465 ALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMIT 524
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
+++ +EA DLF+ M + D V + L+ CAN+ +L+ G++IHAF +
Sbjct: 525 SCSQNGK-PEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFR 583
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
D +ALIDMY+K G + A R FD M +KN +SW S+IA Y HG +++ L+ M
Sbjct: 584 SDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGM 643
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
+G+ P+ VTFL+++ AC H G EG F M + I+ R EH++C+VDLF R G+
Sbjct: 644 LGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGR 703
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
L A+ MI M P A +W +LGAC ++GN L E+A+RNLFD++P+ S YV+LSN+
Sbjct: 704 LNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNV 763
Query: 547 YTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
+ AG W++ K R LM+ER ++K PG S++
Sbjct: 764 HANAGQWESVLKIRSLMKERGVQKVPGCSWI 794
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 163/521 (31%), Positives = 271/521 (52%), Gaps = 14/521 (2%)
Query: 3 IVRANFKTGQLKQALKF---SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
++R GQ AL F L C TL D T+ +++ C + ++H I
Sbjct: 118 MIRGFTMMGQFDFALLFYFKMLGC-GTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFM 176
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G+E ++ + + +I FY++ G + AR FDRMP ++ V W M++GY +NG +NA VF
Sbjct: 177 GFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVF 236
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
M R+ N T++ L CA + G + G + + V + LL +YAKC
Sbjct: 237 MEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKC 296
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G + DA LF+ + + D+V+WN MI G GF D++ LF M+ MKPD T S L
Sbjct: 297 GHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFL 356
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
G L + +IH II+ G+ L +LID+Y K + A +++ DI+
Sbjct: 357 PLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIV 416
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
CTA+ISG+ + + A ++F+ ++ ++M + V L +L CA +A+L LG+++H
Sbjct: 417 VCTAMISGYVL-NGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGH 475
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
K VG+A++DMYAK G + A++ F + DK+ + W S+I +++G EA
Sbjct: 476 ILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEA 535
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF--SCV 477
I+L+++M G + V+ + L AC++ G E+ M+ R R++ F S +
Sbjct: 536 IDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMM---RGAFRSDLFAESAL 592
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
+D++++ G L+ A + M K S W++I+ A YGN
Sbjct: 593 IDMYSKCGNLDLACRVFDTMEEKNEVS-WNSIIAA---YGN 629
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 151/511 (29%), Positives = 258/511 (50%), Gaps = 15/511 (2%)
Query: 12 QLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKV 71
+ + L+FS+ D+L +S+LQ C D Q HA ++ NG N L TK+
Sbjct: 30 NIGKPLQFSIHNDDSL--APQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKL 87
Query: 72 IIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQ 131
+ Y G L A+ F ++ W MI G+ G + ALL + ML G ++
Sbjct: 88 LGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDK 147
Query: 132 FTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER 191
+T+ ++AC + + GR++ IQ F ++FV S+L+ Y++ G I DA LF+R
Sbjct: 148 YTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDR 207
Query: 192 IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI 251
+ KD V WN M+ G G D++ +F M R P+ T +L I +
Sbjct: 208 MPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFG 267
Query: 252 SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD 311
SQ+H L++ GLE + + +L+ +YAK G + A +L+ M KTD+++ +ISG+ +
Sbjct: 268 SQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQ- 326
Query: 312 DNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAV 371
+ EA LF +MI +M D + L + + A+L G++IH + + S D +
Sbjct: 327 NGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFL 386
Query: 372 GNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGM 431
+ALID+Y K ++ A + FD+ +++ T++I+GY +G + A+E+++ + E M
Sbjct: 387 KSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERM 446
Query: 432 VPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSC-----VVDLFARRGQ 486
N VT S+L AC+ G EL IL SC ++D++A+ G+
Sbjct: 447 RANSVTLASVLPACAGLAALTLGKELHG------HILKNGHGGSCYVGSAIMDMYAKCGR 500
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYG 517
L+ A+ ++ K A W++++ +CS G
Sbjct: 501 LDLAHQTFIGISDK-DAVCWNSMITSCSQNG 530
>gi|356502497|ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 852
Score = 370 bits (950), Expect = e-99, Method: Compositional matrix adjust.
Identities = 197/557 (35%), Positives = 320/557 (57%), Gaps = 42/557 (7%)
Query: 30 PSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
PS Y S+L+ C ++ +IH +++ NG+ESN+++ ++ YAK + A
Sbjct: 210 PSQYTLGSILRGCSALGLIQKGEMIHGYVVKNGFESNVYVVAGLVDMYAKCRHISEAEIL 269
Query: 88 FDRMP--ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
F + + N V WTAM++GYAQNG D A+ F M GV +NQFT+ S L AC+ +
Sbjct: 270 FKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEFFRYMHTEGVESNQFTFPSILTACSSVS 329
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
G + G I + F N +V+SAL+D+YAKCG + A + E +E DVVSWN+MI
Sbjct: 330 AHCFGEQVHGCIVRNGFGCNAYVQSALVDMYAKCGDLGSAKRVLENMEDDDVVSWNSMIV 389
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
G GF +++ LF+ M + MK D +T S+L + G + +H L+IK G E+
Sbjct: 390 GCVRHGFEEEAILLFKKMHARNMKIDHYTFPSVLNCCIVG--RIDGKSVHCLVIKTGFEN 447
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
++ +L+D+YAK + AY ++ M + D+IS T+L++G+ ++ +H +E+ F DM
Sbjct: 448 YKLVSNALVDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVTGYTQNGSH-EESLKTFCDM 506
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ + D I+ +L+ CA + L G+Q+H+ K +V N+L+ MYAK G +
Sbjct: 507 RISGVSPDQFIVASILSACAELTLLEFGKQVHSDFIKLGLRSSLSVNNSLVTMYAKCGCL 566
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
DA+ F M ++VI+WT+LI GYA++G G ++++ +++MK
Sbjct: 567 DDADAIFVSMHVRDVITWTALIVGYARNGKGRDSLKYFQQMK------------------ 608
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
Y I P EH++C++DLF R G+L+ A ++ QM++KP A++
Sbjct: 609 -----------------KIYGIEPGPEHYACMIDLFGRLGKLDEAKEILNQMDVKPDATV 651
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
W A+L AC ++GN LGE AA NLF++EP ++ YV+LSN+Y AA WD+A K R+LM+
Sbjct: 652 WKALLAACRVHGNLELGERAATNLFELEPMNAMPYVMLSNMYLAARKWDDAAKIRRLMKS 711
Query: 566 RSLRKNPGYSFLQSSKK 582
+ + K PG S+++ + +
Sbjct: 712 KGITKEPGCSWIEMNSR 728
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 194/550 (35%), Positives = 319/550 (58%), Gaps = 5/550 (0%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
ST+ S+ + C A R +H H + + +++ + T + Y K ++ A+K F+
Sbjct: 276 STFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNS 335
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+P N+ S+ A+I GYA++ AL +F + +SG+ ++ + S A RACA ++ G
Sbjct: 336 LPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEG 395
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ G K N+ V +A+LD+Y KCG + +A ++FE + +D VSWNA+I
Sbjct: 396 LQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQN 455
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIK--LGLESSNK 268
G + + LF M++ GM+PD FT GS+L+A G L +IH+ IIK LGL+S
Sbjct: 456 GNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVG 515
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +LID+Y+K G + A +L+ + + ++S A+ISGF+ S+EA F M+
Sbjct: 516 I--ALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQ-KQSEEAQKTFSKMLEM 572
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ D+ +L+ CAN+ ++ LG+QIHA K + DA + + L+DMY+K G + D
Sbjct: 573 GVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDF 632
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
F++ +++ ++W +++ GYA+HG G EA+++++ M+ E + PN TFL++L AC H
Sbjct: 633 QLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHM 692
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
GL +G F M++ Y + P+ EH+SCVVD+ R GQ+ A +I M + A +W
Sbjct: 693 GLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRT 752
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L C I+GN + E AA ++ +EPE S YV+LSNIY AG W+ K RK+M L
Sbjct: 753 LLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGL 812
Query: 569 RKNPGYSFLQ 578
+K PG S+++
Sbjct: 813 KKEPGCSWIE 822
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 152/536 (28%), Positives = 259/536 (48%), Gaps = 42/536 (7%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYE----------------SNLHLSTKV---- 71
T+ + Q C D+KA HA +I ++ S+L + KV
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 72 -----------IIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+ YA GD+ A+K FD MPER+VVSW ++ISGY NG + VF
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M R G ++ T++ L++C+ + GG I G K F ++ SALLD+YAKC
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCK 223
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD---SFWLFRSMMRQGMKPDCFTLGS 237
++ + F + K+ VSW+A+I G NDD LF+ M + G+ T S
Sbjct: 224 KLDCSIQFFHSMPEKNWVSWSAIIAGCVQ---NDDLRGGLELFKEMQKAGVGVSQSTFAS 280
Query: 238 ILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
+ R+ G L SQ+H +K + + + +D+Y K ++ A +L+ S+ +
Sbjct: 281 VFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHN 340
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
+ S A+I G+AR D EA +F+ + +G+D+V L CA + G Q+H
Sbjct: 341 LQSYNAIIVGYARSDK-GIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVH 399
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
+ K + V NA++DMY K G + +A F+EM ++ +SW ++IA + ++G
Sbjct: 400 GLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEE 459
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSH-TGLTCEGWELFTDMINKYRILPRAEHFSC 476
+ + L+ M GM P++ T+ S+L AC+ L C G E+ +I K R+ +
Sbjct: 460 KTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNC-GMEIHNRII-KSRLGLDSFVGIA 517
Query: 477 VVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDM 532
++D++++ G +E A + ++ + S W+AI+ S+ + + + +M
Sbjct: 518 LIDMYSKCGMMEKAEKLHDRLAEQTVVS-WNAIISGFSLQKQSEEAQKTFSKMLEM 572
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 144/530 (27%), Positives = 264/530 (49%), Gaps = 13/530 (2%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
T+ D +T+ +L+ C + IH + G++ ++ + ++ YAK + +
Sbjct: 170 TVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSI 229
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
+ F MPE+N VSW+A+I+G QN L +F M ++GV +Q T++S R+CA +
Sbjct: 230 QFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLS 289
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
L+ G + G K F ++ + +A LD+Y KC + DA LF + ++ S+NA+I
Sbjct: 290 ALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIV 349
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV---GGIELMKISQIHDLIIKLG 262
G A ++ +FR + + G+ D +L RA G +E + Q+H L +K
Sbjct: 350 GYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGL---QVHGLSMKSL 406
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
+S+ + +++D+Y K G++ A ++ M+ D +S A+I+ ++ N K LF
Sbjct: 407 CQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEK-TLSLF 465
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
M+ M D+ +L CA +LN G +IH K + D+ VG ALIDMY+K
Sbjct: 466 VWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKC 525
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
G + A + D + ++ V+SW ++I+G++ EA + + KM G+ P++ T+ ++L
Sbjct: 526 GMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATIL 585
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
C++ G ++ +I K + A S +VD++++ G ++ + +I +
Sbjct: 586 DTCANLVTVELGKQIHAQIIKK-ELQSDAYISSTLVDMYSKCGNMQD-FQLIFEKAPNRD 643
Query: 503 ASLWSAILGACSIYGNTSLGELAARNLFDMEPEK-SVNYVVLSNIYTAAG 551
W+A++ Y LGE A + M+ E N+ + A G
Sbjct: 644 FVTWNAMVCG---YAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACG 690
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 202/389 (51%), Gaps = 3/389 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD + + C K + + +H + + +SN+ ++ ++ Y K G ++ A
Sbjct: 374 LDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLV 433
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F+ M R+ VSW A+I+ + QNG +E L +F ML+SG+ ++FTY S L+ACA + L
Sbjct: 434 FEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQAL 493
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G I I K R + FV AL+D+Y+KCG +E A L +R+ + VVSWNA+I G
Sbjct: 494 NCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGF 553
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
++Q ++++ F M+ G+ PD FT +IL + + QIH IIK L+S
Sbjct: 554 SLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDA 613
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
++ +L+D+Y+K G+++ ++ D ++ A++ G+A+ +EA +F+ M L
Sbjct: 614 YISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQ-HGLGEEALKIFEYMQL 672
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQ-IHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ + + +L C ++ + G H+ Y + ++D+ +SG+++
Sbjct: 673 ENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVS 732
Query: 387 DANRAFDEMG-DKNVISWTSLIAGYAKHG 414
A + M + + + W +L++ HG
Sbjct: 733 KALELIEGMPFEADAVIWRTLLSICKIHG 761
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 186/547 (34%), Positives = 310/547 (56%), Gaps = 1/547 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T++ LL C + A +IH I+ +G +SN HL+ ++ Y + G ++ A+ F+
Sbjct: 433 TFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGT 492
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
R+V+SW +MI+G+AQ+G E A +F M + + T++S L C L+ G+
Sbjct: 493 QARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGK 552
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I G I + ++ + +AL+++Y +CG ++DA +F ++ +DV+SW AMIGG A QG
Sbjct: 553 QIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQG 612
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
+ + LF M +G +P T SIL+ L + ++ I+ G E +
Sbjct: 613 EDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGN 672
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
+LI Y+K GS+ A +++ M DI+S +I+G+A++ + A + M + +
Sbjct: 673 ALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQN-GLGQTAVEFAYQMQEQDVV 731
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
+ +LN C++ ++L G+++HA K + D VG ALI MYAK G +A
Sbjct: 732 PNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEV 791
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLT 451
FD + +KNV++W ++I YA+HG +A+ + M+ EG+ P+ TF S+L AC+H GL
Sbjct: 792 FDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLV 851
Query: 452 CEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
EG+++F+ M ++Y +LP EH+ C+V L R + + A +I QM P A++W +LG
Sbjct: 852 LEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLG 911
Query: 512 ACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKN 571
AC I+GN +L E AA N + Y++LSN+Y AAG WD+ K R++ME R +RK
Sbjct: 912 ACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKE 971
Query: 572 PGYSFLQ 578
PG S+++
Sbjct: 972 PGRSWIE 978
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 163/528 (30%), Positives = 273/528 (51%), Gaps = 44/528 (8%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L+ +TY+S+L C KA LIH+HI +G+ S++ + +I YA+ GD+ AR+
Sbjct: 328 LNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKAREL 387
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F MP+R+++SW A+I+GYA+ A+ ++ M GV+ + T+ L ACA
Sbjct: 388 FYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAY 447
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+MI I + N + +AL+++Y +CG + +A +FE + +DV+SWN+MI G
Sbjct: 448 ADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGH 507
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A G + ++ LF+ M + ++PD T S+L L QIH I + GL+
Sbjct: 508 AQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDV 567
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
L +LI++Y + GS++ A ++ S+ D++S TA+I G A D +A +LF M
Sbjct: 568 NLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCA-DQGEDMKAIELFWQMQN 626
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ +L +C + A L+ G+++ A+ D VGNALI Y+KSG + D
Sbjct: 627 EGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTD 686
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS- 446
A FD+M ++++SW +IAGYA++G G A+E +M+ + +VPN +F+SLL ACS
Sbjct: 687 AREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSS 746
Query: 447 ----------------------------------HTGLTCEGWELFTDMINKYRILPRAE 472
G E E+F ++I K +
Sbjct: 747 FSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVT---- 802
Query: 473 HFSCVVDLFARRGQLESA---YNMIRQMNIKPTASLWSAILGACSIYG 517
++ +++ +A+ G A +N + + IKP S +++IL AC+ G
Sbjct: 803 -WNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAG 849
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 171/577 (29%), Positives = 289/577 (50%), Gaps = 35/577 (6%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
T + +TY++LLQ C K+ +A IHA ++ ++ LS +I Y K VL A
Sbjct: 23 TETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAH 82
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
+ F MP R+V+SW ++IS YAQ G+ + A +F M +G N+ TY S L AC
Sbjct: 83 QVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPA 142
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
L+ G+ I I K + + V+++LL +Y KCG + A +F I +DVVS+N M+G
Sbjct: 143 ELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLG 202
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
A + + + LF M +G+ PD T ++L A L + +IH L ++ GL S
Sbjct: 203 LYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNS 262
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
++ +L+ + + G + SA Q ++ D++ ALI+ A+ H+ EAF+ + M
Sbjct: 263 DIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQ-HGHNVEAFEQYYRM 321
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ ++ +LN C+ +L G+ IH+ + S D +GNALI MYA+ G++
Sbjct: 322 RSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDL 381
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A F M +++ISW ++IAGYA+ EA+ LYK+M+ EG+ P VTFL LL AC
Sbjct: 382 PKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSAC 441
Query: 446 SHTGLTCEGWELFTD---------------MINKYR---ILPRAEH------------FS 475
+++ +G + D ++N YR L A++ ++
Sbjct: 442 ANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWN 501
Query: 476 CVVDLFARRGQLESAYNMIRQMN---IKPTASLWSAILGACSIYGNTSLGELAARNLFDM 532
++ A+ G E+AY + ++M ++P ++++L C LG+ + +
Sbjct: 502 SMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITES 561
Query: 533 EPEKSVNY-VVLSNIYTAAGAWDNARKTRKLMEERSL 568
+ VN L N+Y G+ +AR ++ R +
Sbjct: 562 GLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDV 598
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 151/545 (27%), Positives = 284/545 (52%), Gaps = 10/545 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY++LL + IH + G S++ + T ++ + GDV SA++AF
Sbjct: 228 DKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAF 287
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+R+VV + A+I+ AQ+G++ A + M GV N+ TY S L AC+ + L+
Sbjct: 288 KGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALE 347
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G++I I + ++ + +AL+ +YA+CG + A LF + ++D++SWNA+I G A
Sbjct: 348 AGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYA 407
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
+ ++ L++ M +G+KP T +L A IH+ I++ G++S+
Sbjct: 408 RREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGH 467
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
L +L+++Y + GS+ A ++ D+IS ++I+G A+ ++ + A+ LF++M +
Sbjct: 468 LANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSY-ETAYKLFQEMQNE 526
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
++ D++ +L+ C N +L LG+QIH + D +GNALI+MY + G + DA
Sbjct: 527 ELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDA 586
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
F + ++V+SWT++I G A G +AIEL+ +M++EG P TF S+L C+ +
Sbjct: 587 RNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSS 646
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
EG ++ ++N L + ++ +++ G + A + +M + S W+
Sbjct: 647 ACLDEGKKVIAYILNSGYELDTGVG-NALISAYSKSGSMTDAREVFDKMPSRDIVS-WNK 704
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSV----NYVVLSNIYTAAGAWDNARKTRKLME 564
I+ Y LG+ A + M+ + V ++V L N ++ A + ++ +
Sbjct: 705 IIAG---YAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIV 761
Query: 565 ERSLR 569
+R L+
Sbjct: 762 KRKLQ 766
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 2/203 (0%)
Query: 11 GQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTK 70
GQ + + D + + +++SLL C A + +HA I+ + ++ +
Sbjct: 715 GQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAA 774
Query: 71 VIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
+I YAK G A++ FD + E+NVV+W AMI+ YAQ+G AL F+ M + G++ +
Sbjct: 775 LISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPD 834
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFV-ENLFVKSALLDLYAKCGWIEDAWILF 189
T++S L AC + G I S++ V + L+ L + ++A L
Sbjct: 835 GSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLI 894
Query: 190 ERIE-RKDVVSWNAMIGGLAMQG 211
++ D W ++G + G
Sbjct: 895 NQMPFPPDAAVWETLLGACRIHG 917
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 196/550 (35%), Positives = 319/550 (58%), Gaps = 7/550 (1%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
S Y SL+ K +Q IHA ++ G + + L TK+I + GD+ AR+ FD
Sbjct: 22 SFYASLIDSATHKAQLKQ---IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDD 78
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+P + W A+I GY++N + ++ALL++S M + V + FT+ L+AC+ + LQ G
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE--RIERKDVVSWNAMIGGLA 208
R + + + F ++FV++ L+ LYAKC + A +FE + + +VSW A++ A
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYA 198
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G ++ +F M + +KPD L S+L A +L + IH ++K+GLE
Sbjct: 199 QNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPD 258
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
L SL +YAK G + +A L+ M ++I A+ISG+A++ +++EA D+F +MI K
Sbjct: 259 LLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKN-GYAREAIDMFHEMINK 317
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ D + + ++ CA V SL R ++ + + D + +ALIDM+AK G + A
Sbjct: 318 DVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGA 377
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
FD D++V+ W+++I GY HG EAI LY+ M+ G+ PNDVTFL LL AC+H+
Sbjct: 378 RLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHS 437
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
G+ EGW F M + ++I P+ +H++CV+DL R G L+ AY +I+ M ++P ++W A
Sbjct: 438 GMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGA 496
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L AC + + LGE AA+ LF ++P + +YV LSN+Y AA WD + R M+E+ L
Sbjct: 497 LLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGL 556
Query: 569 RKNPGYSFLQ 578
K+ G S+++
Sbjct: 557 NKDVGCSWVE 566
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 205/425 (48%), Gaps = 24/425 (5%)
Query: 3 IVRANFKTGQLKQAL------KFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHI 56
I+R + + AL + + PD+ T+ LL+ C + +HA +
Sbjct: 90 IIRGYSRNNHFQDALLMYSNMQLARVSPDSF----TFPHLLKACSGLSHLQMGRFVHAQV 145
Query: 57 ITNGYESNLHLSTKVIIFYAKVGDVLSARKAFD--RMPERNVVSWTAMISGYAQNGYDEN 114
G+++++ + +I YAK + SAR F+ +PER +VSWTA++S YAQNG
Sbjct: 146 FRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPME 205
Query: 115 ALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQK-GRFVENLFVKSALL 173
AL +FS M + V+ + S L A ++ L+ GR I S+ K G +E + S L
Sbjct: 206 ALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS-LN 264
Query: 174 DLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCF 233
+YAKCG + A ILF++++ +++ WNAMI G A G+ ++ +F M+ + ++PD
Sbjct: 265 TMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTI 324
Query: 234 TLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
++ S + A L + +++ + + ++ +LID++AK GS+ A ++
Sbjct: 325 SITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRT 384
Query: 294 LKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG 353
L D++ +A+I G+ ++EA L++ M + +DV +L C + + G
Sbjct: 385 LDRDVVVWSAMIVGYGL-HGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG 443
Query: 354 ----RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIA 408
++ Q + A V ID+ ++G + A M V W +L++
Sbjct: 444 WWFFNRMADHKINPQQQHYACV----IDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLS 499
Query: 409 GYAKH 413
KH
Sbjct: 500 ACKKH 504
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 200/577 (34%), Positives = 321/577 (55%), Gaps = 4/577 (0%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
KTG+LK+AL ++ T + + LLQ C ++ Q +HA I+ +G + N +
Sbjct: 24 KTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRY 83
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
L ++ YAK G + AR+ FD + +RN+VSWTAMI + + A + M +G
Sbjct: 84 LENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAG 143
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
+ ++ T+ S L A LQ G+ + I + V ++L+ +YAKCG I A
Sbjct: 144 CKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKAR 203
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
++F+R+ K+VV+W +I G A QG D + L +M + + P+ T SIL+
Sbjct: 204 VIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPA 263
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
L ++H II+ G + SLI +Y K G + A +L+ + D+++ TA+++
Sbjct: 264 ALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVT 323
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
G+A+ H EA +LF+ M + + D + +L C++ A L G++IH +
Sbjct: 324 GYAQLGFHD-EAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYN 382
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG-YAKHGYGHEAIELYKK 425
D + +AL+ MYAK G + DA+ F++M ++NV++WT++I G A+HG EA+E + +
Sbjct: 383 LDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQ 442
Query: 426 MKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRG 485
MK +G+ P+ VTF S+L AC+H GL EG + F M Y I P EH+SC VDL R G
Sbjct: 443 MKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAG 502
Query: 486 QLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSN 545
LE A N+I M P S+W A+L AC ++ + GE AA N+ ++P+ YV LS+
Sbjct: 503 HLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSS 562
Query: 546 IYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
IY AAG +++A K R++ME+R + K PG S+++ K
Sbjct: 563 IYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGK 599
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 134/465 (28%), Positives = 246/465 (52%), Gaps = 19/465 (4%)
Query: 103 ISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRF 162
+S + G + AL + + M+ G R + L+ CAR+R L+ GR + +I K
Sbjct: 19 VSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 78
Query: 163 VENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRS 222
N ++++ LL +YAKCG + DA +F+ I +++VSW AMI N ++F + +
Sbjct: 79 QPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYET 138
Query: 223 MMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKLTGSLIDVYAKYG 281
M G KPD T S+L A EL+++ Q +H I++ GLE ++ SL+ +YAK G
Sbjct: 139 MKLAGCKPDKVTFVSLLNAFTNP-ELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCG 197
Query: 282 SIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLML 341
I A ++ + + ++++ T LI+G+A+ A +L + M ++ + + +L
Sbjct: 198 DISKARVIFDRLPEKNVVTWTLLIAGYAQ-QGQVDVALELLETMQQAEVAPNKITFASIL 256
Query: 342 NICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVI 401
C A+L G+++H + + + V N+LI MY K G + +A + F ++ ++V+
Sbjct: 257 QGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVV 316
Query: 402 SWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM 461
+WT+++ GYA+ G+ EAI L+++M+ +G+ P+ +TF S+L +CS EG + +
Sbjct: 317 TWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQL 376
Query: 462 INK-YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL-GACSIYGNT 519
++ Y + + S +V ++A+ G ++ A + QM+ + + W+AI+ G C+ +G
Sbjct: 377 VHAGYNLDVYLQ--SALVSMYAKCGSMDDASLVFNQMSERNVVA-WTAIITGCCAQHGRC 433
Query: 520 SLGELAARNLFD------MEPEKSVNYVVLSNIYTAAGAWDNARK 558
A FD ++P+K VLS T G + RK
Sbjct: 434 R----EALEYFDQMKKQGIKPDKVTFTSVLSAC-THVGLVEEGRK 473
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 190/550 (34%), Positives = 316/550 (57%), Gaps = 1/550 (0%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
+ ++ C + +HA +I GY+ ++ + ++ Y+K+GD+ A F ++P
Sbjct: 205 FSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVP 264
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
E +VVSW A ISG +G+D++AL + M SG+ N FT SS L+ACA GR
Sbjct: 265 ETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQ 324
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF 212
I G + K + ++ L+D+YAK G ++DA +F+ I ++D+V WNA+I G +
Sbjct: 325 IHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQ 384
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS 272
+ ++ LF M ++G + TL ++L+++ + Q+H L KLG S + +
Sbjct: 385 HAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNG 444
Query: 273 LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI 332
LID Y K + AY+++ DII+ T++I+ ++ D H ++A LF +M+ K +
Sbjct: 445 LIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCD-HGEDAIKLFMEMLRKGLDP 503
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAF 392
D +L +LN CA++++ G+Q+HA K Q D GNAL+ YAK G I DA+ AF
Sbjct: 504 DPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAF 563
Query: 393 DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTC 452
+ +K V+SW+++I G A+HG+G A++++ +M E + PN +T S+L AC+H GL
Sbjct: 564 SGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVD 623
Query: 453 EGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
E F M + I EH++C++DL R G+L+ A ++ M + A++W A+L A
Sbjct: 624 EAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAA 683
Query: 513 CSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNP 572
++ + LG LAA LF +EPEKS +V+L+N Y +AG WD+ K RKLM++ ++K P
Sbjct: 684 SRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKEP 743
Query: 573 GYSFLQSSKK 582
S+++ K
Sbjct: 744 AMSWVELKDK 753
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 156/519 (30%), Positives = 270/519 (52%), Gaps = 11/519 (2%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP-ERNVVSWTAMISGYAQNG 110
+HA + G ++ ++ ++ Y G V AR FD ERN VSW ++S Y +N
Sbjct: 122 LHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKND 181
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
+A+ VF M+ GV+ N+F +S + AC R L+ GR + + + + +++F +
Sbjct: 182 RCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTAN 241
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
AL+D+Y+K G I A ++F ++ DVVSWNA I G + G + + L M G+ P
Sbjct: 242 ALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVP 301
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
+ FTL SIL+A G QIH ++K +S N + L+D+YAK+G + A +++
Sbjct: 302 NVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVF 361
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
+ + D++ ALISG + H+ EA LF M + ++ L +L A++ ++
Sbjct: 362 DWIPQRDLVLWNALISGCSHGAQHA-EALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAI 420
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
+ RQ+HA A K D+ V N LID Y K + A R F++ G ++I++TS+I
Sbjct: 421 SDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITAL 480
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
++ +G +AI+L+ +M +G+ P+ SLL AC+ +G ++ +I K + +
Sbjct: 481 SQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLI-KRQFMSD 539
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
+ +V +A+ G +E A + K S WSA++G + +G+ G+ A
Sbjct: 540 VFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVS-WSAMIGGLAQHGH---GKRALDVFH 595
Query: 531 DMEPEK-SVNYVVLSNIYTA---AGAWDNARKTRKLMEE 565
M E S N++ ++++ A AG D A++ M+E
Sbjct: 596 RMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKE 634
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 200/397 (50%), Gaps = 9/397 (2%)
Query: 48 QAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYA 107
Q IHAH++ +G + ++ FY+K SAR+ FD +P+ VSW+++++ Y+
Sbjct: 22 QGAHIHAHLLKSGLFAVFR--NHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVTAYS 79
Query: 108 QNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLF 167
N +AL F +M VR N+F L+ + G + ++F
Sbjct: 80 NNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAGF---GTQLHALAMATGLGGDIF 136
Query: 168 VKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ 226
V +AL+ +Y G++++A ++F+ ++ VSWN ++ + +F M+
Sbjct: 137 VANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWG 196
Query: 227 GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSA 286
G++P+ F ++ A G +L ++H ++I+ G + +L+D+Y+K G IR A
Sbjct: 197 GVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMA 256
Query: 287 YQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICAN 346
++ + +TD++S A ISG H + A +L M + + L +L CA
Sbjct: 257 AVVFGKVPETDVVSWNAFISGCVL-HGHDQHALELLLQMKSSGLVPNVFTLSSILKACAG 315
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
+ NLGRQIH F K + D + L+DMYAK G + DA + FD + ++++ W +L
Sbjct: 316 SGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNAL 375
Query: 407 IAGYAKHGYGH-EAIELYKKMKHEGMVPNDVTFLSLL 442
I+G HG H EA+ L+ +M+ EG N T ++L
Sbjct: 376 ISG-CSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVL 411
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 198/411 (48%), Gaps = 13/411 (3%)
Query: 11 GQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLS 68
G + AL+ L + L P+ + S+L+ C A IH ++ +S+ +++
Sbjct: 282 GHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIA 341
Query: 69 TKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR 128
++ YAK G + A+K FD +P+R++V W A+ISG + AL +F M + G
Sbjct: 342 FGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFD 401
Query: 129 ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWIL 188
N+ T ++ L++ A + + R + +K F+ + V + L+D Y KC + A+ +
Sbjct: 402 VNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRV 461
Query: 189 FERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIEL 248
FE+ D++++ +MI L+ +D+ LF M+R+G+ PD F L S+L A
Sbjct: 462 FEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAY 521
Query: 249 MKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGF 308
+ Q+H +IK S +L+ YAK GSI A + + + ++S +A+I G
Sbjct: 522 EQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGL 581
Query: 309 ARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI-----HAFAFKY 363
A+ H K A D+F M+ + + + + + +L C + ++ ++ F +
Sbjct: 582 AQ-HGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIER 640
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKH 413
+ A +ID+ ++G++ DA + M N W +L+A H
Sbjct: 641 TEEHYA----CMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVH 687
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 195/550 (35%), Positives = 320/550 (58%), Gaps = 7/550 (1%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
S Y SL+ K +Q IHA ++ G + + L TK+I + GD+ AR+ FD
Sbjct: 22 SFYASLIDSATHKAQLKQ---IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDD 78
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+P + W A+I GY++N + ++ALL++S M + V + FT+ L+AC+ + LQ G
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE--RIERKDVVSWNAMIGGLA 208
R + + + F ++FV++ L+ LYAKC + A +FE + + +VSW A++ A
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYA 198
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G ++ +F M + +KPD L S+L A +L + IH ++K+GLE
Sbjct: 199 QNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPD 258
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
L SL +YAK G + +A L+ M ++I A+ISG+A++ +++EA D+F +MI K
Sbjct: 259 LLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKN-GYAREAIDMFHEMINK 317
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ D + + ++ CA V SL R ++ + + D + +ALIDM+AK G + A
Sbjct: 318 DVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGA 377
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
FD D++V+ W+++I GY HG EAI LY+ M+ G+ PNDVTFL LL AC+H+
Sbjct: 378 RLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHS 437
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
G+ EGW F +++ ++I P+ +H++CV+DL R G L+ AY +I+ M ++P ++W A
Sbjct: 438 GMVREGWWFF-NLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGA 496
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L AC + + LGE AA+ LF ++P + +YV LSN+Y AA WD + R M+E+ L
Sbjct: 497 LLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGL 556
Query: 569 RKNPGYSFLQ 578
K+ G S+++
Sbjct: 557 NKDVGCSWVE 566
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 203/421 (48%), Gaps = 16/421 (3%)
Query: 3 IVRANFKTGQLKQAL------KFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHI 56
I+R + + AL + + PD+ T+ LL+ C + +HA +
Sbjct: 90 IIRGYSRNNHFQDALLMYSNMQLARVSPDSF----TFPHLLKACSGLSHLQMGRFVHAQV 145
Query: 57 ITNGYESNLHLSTKVIIFYAKVGDVLSARKAFD--RMPERNVVSWTAMISGYAQNGYDEN 114
G+++++ + +I YAK + SAR F+ +PER +VSWTA++S YAQNG
Sbjct: 146 FRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPME 205
Query: 115 ALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQK-GRFVENLFVKSALL 173
AL +FS M + V+ + S L A ++ L+ GR I S+ K G +E + S L
Sbjct: 206 ALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS-LN 264
Query: 174 DLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCF 233
+YAKCG + A ILF++++ +++ WNAMI G A G+ ++ +F M+ + ++PD
Sbjct: 265 TMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTI 324
Query: 234 TLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
++ S + A L + +++ + + ++ +LID++AK GS+ A ++
Sbjct: 325 SITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRT 384
Query: 294 LKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG 353
L D++ +A+I G+ ++EA L++ M + +DV +L C + + G
Sbjct: 385 LDRDVVVWSAMIVGYGL-HGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG 443
Query: 354 RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAK 412
++ + +ID+ ++G + A M V W +L++ K
Sbjct: 444 WWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKK 503
Query: 413 H 413
H
Sbjct: 504 H 504
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 187/547 (34%), Positives = 312/547 (57%), Gaps = 1/547 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T++ LL C + A +IH I+ +G +SN HL+ ++ Y + G ++ A+ F+
Sbjct: 488 TFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGT 547
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
R+++SW +MI+G+AQ+G E A +F M + G+ ++ T++S L C L+ GR
Sbjct: 548 RARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGR 607
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I I + ++ + +AL+++Y +CG ++DA+ +F + ++V+SW AMIGG A QG
Sbjct: 608 QIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQG 667
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
+ +F LF M G KP T SIL+A + L + ++ I+ G E +
Sbjct: 668 EDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGN 727
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
+LI Y+K GS+ A +++ M DI+S +I+G+A++ A M + +
Sbjct: 728 ALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQN-GLGGTALQFAYQMQEQGVV 786
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
++ +LN C++ ++L G+++HA K + D VG ALI MYAK G + +A
Sbjct: 787 LNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEV 846
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLT 451
FD +KNV++W ++I YA+HG +A++ + M EG+ P+ TF S+L AC+H+GL
Sbjct: 847 FDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLV 906
Query: 452 CEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
EG +F+ + +++ + P EH+ C+V L R G+ + A +I QM P A++W +LG
Sbjct: 907 MEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLG 966
Query: 512 ACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKN 571
AC I+GN +L E AA N + YV+LSN+Y AAG WD+ K R++ME R +RK
Sbjct: 967 ACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKE 1026
Query: 572 PGYSFLQ 578
PG S+++
Sbjct: 1027 PGRSWIE 1033
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 161/517 (31%), Positives = 285/517 (55%), Gaps = 5/517 (0%)
Query: 3 IVRANFKTGQLKQALK--FSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
++ A + G ++A + + + +++ +TY+S+L C KA LIH+HI G
Sbjct: 356 LIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVG 415
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+ S++ + +I YA+ GD+ AR+ F+ MP+R+++SW A+I+GYA+ A+ ++
Sbjct: 416 HSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYK 475
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M GV+ + T+ L AC G+MI I + N + +AL+++Y +CG
Sbjct: 476 QMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCG 535
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
I +A +FE +D++SWN+MI G A G + ++ LF M ++G++PD T S+L
Sbjct: 536 SIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLV 595
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
L QIH LII+ GL+ L +LI++Y + GS++ AY+++ S+ +++S
Sbjct: 596 GCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMS 655
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
TA+I GFA D ++AF+LF M +L C + A L+ G+++ A
Sbjct: 656 WTAMIGGFA-DQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHI 714
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
D VGNALI Y+KSG + DA + FD+M +++++SW +IAGYA++G G A+
Sbjct: 715 LNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTAL 774
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDL 480
+ +M+ +G+V N +F+S+L ACS EG + +++ K ++ + ++ +
Sbjct: 775 QFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIV-KRKMQGDVRVGAALISM 833
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
+A+ G LE A + K + W+A++ A + +G
Sbjct: 834 YAKCGSLEEAQEVFDNFTEKNVVT-WNAMINAYAQHG 869
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 158/542 (29%), Positives = 280/542 (51%), Gaps = 13/542 (2%)
Query: 1 MNIVRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
+ ++R G ++ L + T + + Y+ L+Q C K++ +A IHA ++ G
Sbjct: 53 VKVMRDEQHRGSEREDLSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAG 112
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
++ LS +I Y K V A + F +MP R+V+SW ++IS YAQ G+ + A +F
Sbjct: 113 VGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFE 172
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M +G ++ TY S L AC L+ G+ I I + + + V+++LL++Y KC
Sbjct: 173 EMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCE 232
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+ A +F I R+DVVS+N M+G A + + ++ LF M +G+ PD T ++L
Sbjct: 233 DLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLD 292
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
A L + +IH L + GL S ++ +L ++ + G + A Q + D++
Sbjct: 293 AFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVV 352
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
ALI+ A+ H +EAF+ + M + ++ +LN C+ +L G IH+
Sbjct: 353 YNALIAALAQ-HGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHI 411
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
+ S D +GN+LI MYA+ G++ A F+ M +++ISW ++IAGYA+ EA+
Sbjct: 412 SEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAM 471
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDL 480
+LYK+M+ EG+ P VTFL LL AC+++ +G + D++ + I + ++++
Sbjct: 472 KLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDIL-RSGIKSNGHLANALMNM 530
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF------DMEP 534
+ R G + A N+ + S W++++ + +G+ AA LF +EP
Sbjct: 531 YRRCGSIMEAQNVFEGTRARDIIS-WNSMIAGHAQHGSYE----AAYKLFLEMKKEGLEP 585
Query: 535 EK 536
+K
Sbjct: 586 DK 587
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 91/264 (34%), Positives = 143/264 (54%), Gaps = 1/264 (0%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
ST+ S+L+ C+ + + AHI+ +GYE + + +I Y+K G + ARK FD+
Sbjct: 689 STFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDK 748
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
MP R+++SW MI+GYAQNG AL M GV N+F++ S L AC+ L+ G
Sbjct: 749 MPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEG 808
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ + I K + ++ V +AL+ +YAKCG +E+A +F+ K+VV+WNAMI A
Sbjct: 809 KRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQH 868
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQI-HDLIIKLGLESSNKL 269
G + F M ++G+KPD T SIL A +M+ ++I L + GL + +
Sbjct: 869 GLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEH 928
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSM 293
G L+ + + G + A L M
Sbjct: 929 YGCLVGLLGRAGRFQEAETLINQM 952
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 202/418 (48%), Gaps = 7/418 (1%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITN 59
+++ + + G + A K L L+P T+ S+L C + +A IH II +
Sbjct: 557 SMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIES 616
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G + +++L +I Y + G + A + F + RNV+SWTAMI G+A G D A +F
Sbjct: 617 GLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELF 676
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
M G + + T+SS L+AC L G+ + I + + V +AL+ Y+K
Sbjct: 677 WQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKS 736
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G + DA +F+++ +D++SWN MI G A G + M QG+ + F+ SIL
Sbjct: 737 GSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSIL 796
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
A L + ++H I+K ++ ++ +LI +YAK GS+ A +++ + + +++
Sbjct: 797 NACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVV 856
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
+ A+I+ +A+ SK A D F M + + D +L+ C + + G +I +
Sbjct: 857 TWNAMINAYAQHGLASK-ALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFS- 914
Query: 360 AFKYQSSYDAAVGN--ALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHG 414
+ + Q + + L+ + ++G +A ++M + W +L+ HG
Sbjct: 915 SLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHG 972
>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 201/580 (34%), Positives = 330/580 (56%), Gaps = 10/580 (1%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K+G+L AL+ S+ + P Y SLLQ C A IHAH+I +G E +
Sbjct: 95 KSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRF 154
Query: 67 LSTKVIIFYAKVG-DVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
+ ++ Y K+G D RK FD + ++V+SWT+MISGY + G N+L +F ML
Sbjct: 155 VGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAY 214
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
GV N FT S+ ++AC+ + L+ GR+ G + F N + SAL+D++ + ++DA
Sbjct: 215 GVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDA 274
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR-QGMKPDCFTLGSILRASVG 244
LF+ + D + W ++I L F D++ F SM R GM PD FT G++L A
Sbjct: 275 RQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGN 334
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
L + ++H +I G + + SL+D+Y K GS+ + +++ M + +S +AL
Sbjct: 335 LGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSAL 394
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
+ G+ ++ + K +F+ M +D +L CA +A++ G+++H +
Sbjct: 395 LGGYCQNGDF-KSVIQIFRKM----EKVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKG 449
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
D V +AL+D+YAK G I A FD+M +N+I+W S+I G+A++G G EA+ ++
Sbjct: 450 GWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFN 509
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
+M EG+ P+ ++F+ +LFACSH GL EG E F M Y I EH+SC+VDL R
Sbjct: 510 QMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRA 569
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLS 544
G LE A +I + + +SLW+A+LGAC+ N + E A+ + ++EP+ ++YV+L+
Sbjct: 570 GLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLA 629
Query: 545 NIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKNI 584
N+Y A G W++A + R+LM++R + K PG S+++ +K N+
Sbjct: 630 NVYKAVGRWNDALRIRRLMKDRGVNKMPGKSWIE-TKNNL 668
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 196/556 (35%), Positives = 328/556 (58%), Gaps = 7/556 (1%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGY-ESNLHLSTKVIIFYAK-VGDVLSARKAFDR 90
+ + + C +K+ +I ++ GY ES++ + +I + K GD+ SA K FDR
Sbjct: 45 FTGVFRACSNKENISLGKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDR 104
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
MP+RNVV+WT MI+ + Q G+ +A+ +F M+ SG ++FT S + ACA M L G
Sbjct: 105 MPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLG 164
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKC---GWIEDAWILFERIERKDVVSWNAMIGGL 207
R + K ++ V +L+D+YAKC G ++DA +F+R+ +V+SW A+I G
Sbjct: 165 RQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGY 224
Query: 208 AMQGFND-DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
G D ++ LF M++ +KP+ FT S+L+A ++ Q++ L++K+ L S
Sbjct: 225 VQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASI 284
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
N + SLI +Y++ G++ +A + + + + +++S +++ +A+ N S+EAF+LF ++
Sbjct: 285 NCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLN-SEEAFELFNEIE 343
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
G++ +L+ +++ ++ G QIH+ K + + NALI MY++ G I
Sbjct: 344 GAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIE 403
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A + F+EMGD NVISWTS+I G+AKHG+ A+E + KM G+ PN+VT++++L ACS
Sbjct: 404 AAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACS 463
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
H GL EG + F M ++ I+PR EH++CVVDL R G LE A ++ M K A +
Sbjct: 464 HVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVL 523
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
LGAC ++GN LG+ AA + + +P Y++LSN++ +AG W+ + RK M+ER
Sbjct: 524 RTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKER 583
Query: 567 SLRKNPGYSFLQSSKK 582
+L K G S+++ K
Sbjct: 584 NLTKEAGCSWIEVENK 599
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 131/424 (30%), Positives = 231/424 (54%), Gaps = 6/424 (1%)
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
+R++VSW+A+IS YA N A+ F ML G N++ ++ RAC+ + G++
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 153 IQGSIQK-GRFVENLFVKSALLDLYAKC-GWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
I G + K G F ++ V AL+D++ K G +E A+ +F+R+ ++VV+W MI
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
GF+ D+ LF M+ G PD FTL ++ A L Q H L++K GL+ +
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVG 183
Query: 271 GSLIDVYAKY---GSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
SL+D+YAK GS+ A +++ M +++S TA+I+G+ + +EA +LF +M+
Sbjct: 184 CSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQ 243
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
++ + +L CAN++ + LG Q++A K + + VGN+LI MY++ G + +
Sbjct: 244 GQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMEN 303
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A +AFD + +KN++S+ +++ YAK EA EL+ +++ G N TF SLL S
Sbjct: 304 ARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASS 363
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
G +G ++ + ++ K + ++ +++R G +E+A+ + +M S S
Sbjct: 364 IGAIGKGEQIHSRIL-KSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTS 422
Query: 508 AILG 511
I G
Sbjct: 423 MITG 426
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 144/283 (50%), Gaps = 3/283 (1%)
Query: 14 KQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKV 71
++A++ L + P+ T+ S+L+ C + ++A ++ S + +
Sbjct: 232 REAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSL 291
Query: 72 IIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQ 131
I Y++ G++ +ARKAFD + E+N+VS+ +++ YA++ E A +F+ + +G N
Sbjct: 292 ISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNA 351
Query: 132 FTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER 191
FT++S L + + + G I I K F NL + +AL+ +Y++CG IE A+ +F
Sbjct: 352 FTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNE 411
Query: 192 IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMK 250
+ +V+SW +MI G A GF + F M+ G+ P+ T ++L A S G+
Sbjct: 412 MGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEG 471
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ + ++ G+ + ++D+ + G + A +L SM
Sbjct: 472 LKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSM 514
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 194/550 (35%), Positives = 300/550 (54%), Gaps = 1/550 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T SLL C A + +H+++I G S++ + ++ Y D+ +A + F
Sbjct: 313 DCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMF 372
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
NVV W M+ + + + +F M G+ NQFTY S LR C + L
Sbjct: 373 LTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALD 432
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G I + K F N++V S L+D+YAK G ++ A ++ + DVVSW A+I G A
Sbjct: 433 LGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYA 492
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
++ F+ M+ +G++ D S + A G L + QIH G
Sbjct: 493 QHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLS 552
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +L+ +YA+ G I+ AY + + D IS LISGFA+ + ++A +F M
Sbjct: 553 IGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQS-GYCEDALKVFAQMNRA 611
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
K+ ++ AN+A++ G+QIHA K D V NALI YAK G I DA
Sbjct: 612 KLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDA 671
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
R F EM +KN +SW ++I GY++HGYG+EA+ L++KMK G +PN VTF+ +L ACSH
Sbjct: 672 RREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHV 731
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
GL +G F M ++ ++P+ H++CVVDL +R G L A I +M I+P A++W
Sbjct: 732 GLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRT 791
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L AC+++ N +GE AA++L ++EPE S YV+LSN+Y +G WD +TR++M R +
Sbjct: 792 LLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGV 851
Query: 569 RKNPGYSFLQ 578
+K PG S+++
Sbjct: 852 KKEPGRSWIE 861
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 163/537 (30%), Positives = 291/537 (54%), Gaps = 16/537 (2%)
Query: 32 TYMSLLQFCIDKK-AERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
++ S+L+ C + R A IHA II +G + +S +I YAK G ++SARK FD
Sbjct: 113 SFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDN 172
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+ ++ VSW AMISG++QNGY+E A+ +F M +G+ + +SS L C +++ G
Sbjct: 173 LCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVG 232
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ + K +V +AL+ LY++ A +F +++ KD VS+N++I GLA Q
Sbjct: 233 EQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQ 292
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
GF+D + LF M R +KPDC T+ S+L A L K Q+H +IK G+ S +
Sbjct: 293 GFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVE 352
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
G+L+D+Y I++A++++ + +++ ++ F + DN S E+F +F+ M +K +
Sbjct: 353 GALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLS-ESFRIFRQMQIKGL 411
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
+ +L C +V +L+LG QIH K ++ V + LIDMYAK G++ A+
Sbjct: 412 IPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHV 471
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
+ + +V+SWT+LI+GYA+H EA++ +K+M + G+ +++ F S + AC+
Sbjct: 472 ILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQA 531
Query: 451 TCEGWELFTDMINKYRILPRAEHFS---CVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
+G ++ + + +E S +V L+AR G+++ AY +++ K + S W+
Sbjct: 532 LNQGRQIHA----QSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSIS-WN 586
Query: 508 AILG--ACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKL 562
++ A S Y +L A N +E ++ + +AA N ++ +++
Sbjct: 587 GLISGFAQSGYCEDALKVFAQMNRAKLE----ASFFTFGSAVSAAANIANIKQGKQI 639
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 158/504 (31%), Positives = 273/504 (54%), Gaps = 11/504 (2%)
Query: 30 PSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFD 89
P + S+L C K +HA + G ++ ++ Y+++ + +SA K F
Sbjct: 213 PYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFS 272
Query: 90 RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG 149
+M ++ VS+ ++ISG AQ G+ + AL +F+ M R ++ + T +S L ACA L
Sbjct: 273 KMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCK 332
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
G + + K ++ V+ ALLDLY C I+ A +F + ++VV WN M+
Sbjct: 333 GEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGK 392
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGLESSN 267
+SF +FR M +G+ P+ FT SILR SVG ++L + QIH +IK G + +
Sbjct: 393 LDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGE--QIHTQVIKTGFQFNV 450
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ LID+YAK+G + +A+ + R++ + D++S TALISG+A+ N EA FK+M+
Sbjct: 451 YVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQ-HNLFAEALKHFKEMLN 509
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ + D++ ++ CA + +LN GRQIHA ++ S D ++GNAL+ +YA+ G I +
Sbjct: 510 RGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKE 569
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A F+++ K+ ISW LI+G+A+ GY +A++++ +M + + TF S + A ++
Sbjct: 570 AYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAAN 629
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
+G ++ MI K E + ++ +A+ G +E A +M K S W+
Sbjct: 630 IANIKQGKQIHA-MIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVS-WN 687
Query: 508 AILGACSIYGNTSLGELAARNLFD 531
A++ S +G + A NLF+
Sbjct: 688 AMITGYSQHGYGN----EAVNLFE 707
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 135/481 (28%), Positives = 244/481 (50%), Gaps = 6/481 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
TY+ LL C++ + + +H I+ G+ + L K++ Y +GD+ K F+ M
Sbjct: 12 TYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDM 71
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR-WLQGG 150
P R+V SW +ISG+ + L +FS M+ V + +++S LRAC+ R ++
Sbjct: 72 PNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYA 131
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
I I + + + + L+ LYAK G I A +F+ + KD VSW AMI G +
Sbjct: 132 EQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQN 191
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI-SQIHDLIIKLGLESSNKL 269
G+ +++ LF M G+ P + S+L I+L + Q+H L+ K G +
Sbjct: 192 GYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCT-KIKLFDVGEQLHALVFKYGSSLETYV 250
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+L+ +Y++ + SA +++ M D +S +LISG A+ S A +LF M
Sbjct: 251 CNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQ-QGFSDGALELFTKMKRDY 309
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ D V + +L+ CA+ +L G Q+H++ K S D V AL+D+Y +I A+
Sbjct: 310 LKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAH 369
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
F +NV+ W ++ + K E+ ++++M+ +G++PN T+ S+L C+ G
Sbjct: 370 EMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVG 429
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
G ++ T +I K S ++D++A+ G+L++A+ ++R + S W+A+
Sbjct: 430 ALDLGEQIHTQVI-KTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVS-WTAL 487
Query: 510 L 510
+
Sbjct: 488 I 488
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 138/480 (28%), Positives = 228/480 (47%), Gaps = 38/480 (7%)
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
M G+ AN TY L C L + + G I K F + + L+D+Y G
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
++ +FE + + V SW+ +I G + ++ LF M+ + + P + S+LRA
Sbjct: 61 LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120
Query: 242 SVGG-IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
G I + QIH II GL S ++ LI +YAK G I SA +++ ++ D +S
Sbjct: 121 CSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVS 180
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
A+ISGF++ + + +EA LF +M + + +L+ C + ++G Q+HA
Sbjct: 181 WVAMISGFSQ-NGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALV 239
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
FKY SS + V NAL+ +Y++ A + F +M K+ +S+ SLI+G A+ G+ A+
Sbjct: 240 FKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGAL 299
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELF---------TDMINKYRILP-- 469
EL+ KMK + + P+ VT SLL AC+ G C+G +L +DMI + +L
Sbjct: 300 ELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLY 359
Query: 470 ------RAEH-------------FSCVVDLFARRGQLESAYNMIRQMNIK---PTASLWS 507
+ H ++ ++ F + L ++ + RQM IK P +
Sbjct: 360 VNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYP 419
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYV--VLSNIYTAAGAWDNARKTRKLMEE 565
+IL C+ G LGE + + +V YV VL ++Y G D A + + E
Sbjct: 420 SILRTCTSVGALDLGEQIHTQVIKTGFQFNV-YVCSVLIDMYAKHGKLDTAHVILRTLTE 478
>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 201/580 (34%), Positives = 330/580 (56%), Gaps = 10/580 (1%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K+G+L AL+ S+ + P Y SLLQ C A IHAH+I +G E +
Sbjct: 36 KSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRF 95
Query: 67 LSTKVIIFYAKVG-DVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
+ ++ Y K+G D RK FD + ++V+SWT+MISGY + G N+L +F ML
Sbjct: 96 VGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAY 155
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
GV N FT S+ ++AC+ + L+ GR+ G + F N + SAL+D++ + ++DA
Sbjct: 156 GVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDA 215
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR-QGMKPDCFTLGSILRASVG 244
LF+ + D + W ++I L F D++ F SM R GM PD FT G++L A
Sbjct: 216 RQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGN 275
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
L + ++H +I G + + SL+D+Y K GS+ + +++ M + +S +AL
Sbjct: 276 LGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSAL 335
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
+ G+ ++ + K +F+ M +D +L CA +A++ G+++H +
Sbjct: 336 LGGYCQNGDF-KSVIQIFRKM----EKVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKG 390
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
D V +AL+D+YAK G I A FD+M +N+I+W S+I G+A++G G EA+ ++
Sbjct: 391 GWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFN 450
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
+M EG+ P+ ++F+ +LFACSH GL EG E F M Y I EH+SC+VDL R
Sbjct: 451 QMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRA 510
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLS 544
G LE A +I + + +SLW+A+LGAC+ N + E A+ + ++EP+ ++YV+L+
Sbjct: 511 GLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLA 570
Query: 545 NIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKNI 584
N+Y A G W++A + R+LM++R + K PG S+++ +K N+
Sbjct: 571 NVYKAVGRWNDALRIRRLMKDRGVNKMPGKSWIE-TKNNL 609
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 367 bits (942), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 185/548 (33%), Positives = 314/548 (57%), Gaps = 1/548 (0%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
S Y S+ + C A + +HAH + + S++ + T + YAK G + A++ F+
Sbjct: 278 SIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNS 337
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+P+ ++ + A+I G +N AL F +L+SG+ N+ + S A ACA ++ G
Sbjct: 338 LPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDG 397
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
R + K N+ V +++LD+Y KC + +A +F+ +ER+D VSWNA+I
Sbjct: 398 RQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQN 457
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
G +++ LF SM+R M+PD FT GS+L+A L +IH+ IIK GL + +
Sbjct: 458 GNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVG 517
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
G+LID+Y K G I A +++ + + ++S A+I+GF HS++A F +M+ +
Sbjct: 518 GALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLL-KHSEDAHSFFYEMLKMSV 576
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
D+ ++L+ CAN+AS+ LG+QIH K + D + + L+DMY+K G + D+
Sbjct: 577 KPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSAL 636
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
F++ +K+ ++W ++I GYA+HG G EA+ +++M+ E + PN TF+S+L AC+H G
Sbjct: 637 VFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGF 696
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
+G F M+ +Y + P+ EH+SC++D+ R G++ A +I++M + A +W +L
Sbjct: 697 IDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLL 756
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
C I+GN + E A + +EPE S ++LSNIY AG W + RK+M L+K
Sbjct: 757 SICKIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADAGMWGKVSEMRKMMRYNKLKK 816
Query: 571 NPGYSFLQ 578
PG S+++
Sbjct: 817 EPGCSWIE 824
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 149/592 (25%), Positives = 274/592 (46%), Gaps = 79/592 (13%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ ++Q C D + + HA +I +G+ ++++S ++ Y + + A K F++M
Sbjct: 45 TFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKM 104
Query: 92 PERNVVSWTAMISGYA-------------------------------QNGYDENALLVFS 120
+R+V+S+ MISGYA QNG ++ VF
Sbjct: 105 SQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFL 164
Query: 121 AMLRS-GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
M RS V +Q T++ L+AC+ + G + G I + F +++ SALLD+YAKC
Sbjct: 165 DMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKC 224
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
++D+ +F I K+ V W+A+I G + LF+ M + G+ S+
Sbjct: 225 KRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVF 284
Query: 240 RASVGGIELMKI-SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
R S G+ +K+ +Q+H +K S + + +D+YAK GS+ A +++ S+ K +
Sbjct: 285 R-SCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSL 343
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
A+I G R++ EA F+ ++ +G +++ L + CA++ GRQ+H+
Sbjct: 344 QCYNAIIVGCVRNEK-GFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHS 402
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHE 418
+ K + V N+++DMY K +++A FDEM ++ +SW ++IA + ++G E
Sbjct: 403 LSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEE 462
Query: 419 AIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF--SC 476
+ L+ M M P+ T+ S+L ACS G E+ +I L + F
Sbjct: 463 TLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGL---DSFVGGA 519
Query: 477 VVDLFARRGQLESA-----------------------------------YNMIRQMNIKP 501
++D++ + G +E A Y M++ M++KP
Sbjct: 520 LIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLK-MSVKP 578
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYV--VLSNIYTAAG 551
++ +L AC+ + LG+ + +E V Y+ L ++Y+ G
Sbjct: 579 DNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDV-YITSTLVDMYSKCG 629
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/498 (25%), Positives = 242/498 (48%), Gaps = 6/498 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
D +T+ +L+ C + +H I+ G+ ++ + ++ YAK + + K
Sbjct: 174 FDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKI 233
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F +P +N V W+A+I+G QN L +F M + G+ +Q Y+S R+CA + L
Sbjct: 234 FSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSAL 293
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G + K F ++ V +A LD+YAKCG + DA +F + + + +NA+I G
Sbjct: 294 KVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGC 353
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
++ F+ +++ G+ + +L A + Q+H L +K L S+
Sbjct: 354 VRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNI 413
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ S++D+Y K ++ A ++ M + D +S A+I+ ++ N +E +LF M+
Sbjct: 414 CVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGN-EEETLNLFASMLR 472
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+M D +L C++ +LN G +IH K D+ VG ALIDMY K G I +
Sbjct: 473 LRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEE 532
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A + D + + ++SW ++IAG+ + +A + +M + P++ T+ +L AC++
Sbjct: 533 AKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACAN 592
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
G ++ +I K + S +VD++++ G ++ + + + K + W+
Sbjct: 593 LASVGLGKQIHGQII-KLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVT-WN 650
Query: 508 AILGACSIYGNTSLGELA 525
A++ Y LGE A
Sbjct: 651 AMICG---YAQHGLGEEA 665
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 155/294 (52%), Gaps = 3/294 (1%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNG 60
++ A+ + G ++ L S ++P TY S+L+ C ++A IH II +G
Sbjct: 450 VIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSG 509
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+ + +I Y K G + A+K DR+ ++ +VSW A+I+G+ + E+A F
Sbjct: 510 LGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFY 569
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
ML+ V+ + FTY+ L ACA + + G+ I G I K ++++ S L+D+Y+KCG
Sbjct: 570 EMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCG 629
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
++D+ ++FE+ KD V+WNAMI G A G +++ F M + ++P+ T SILR
Sbjct: 630 NMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILR 689
Query: 241 ASVG-GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
A G + + ++ + GLE + +ID+ + G I A +L + M
Sbjct: 690 ACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEM 743
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 199/561 (35%), Positives = 318/561 (56%), Gaps = 6/561 (1%)
Query: 23 CPDTLLDPST-YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDV 81
C ++ P Y SL+ I K Q I+A ++ G + L K++ + +G+V
Sbjct: 67 CNESTFKPDKFYASLIDDSIHKTHLNQ---IYAKLLVTGLQYGGFLIAKLVNKASNIGEV 123
Query: 82 LSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC 141
ARK FD+ P+ +V W A++ Y+++G+ +A+ +++ M + V + F++ L+AC
Sbjct: 124 SCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKAC 183
Query: 142 ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN 201
+ + L+ GR + G I + F ++FV++ L+ LYAKCG I A +F R+ + +VSW
Sbjct: 184 SALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWT 243
Query: 202 AMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKL 261
++I G A G ++ +F M + ++PD L S+LRA +L IH +IK+
Sbjct: 244 SIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKM 303
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDL 321
GLE L SL +YAK G + A + + +I A+ISG+ + + +++EA +L
Sbjct: 304 GLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVK-NGYAEEAIEL 362
Query: 322 FKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
F+ M K + D + + + CA + SL L R + + + D V +LID YAK
Sbjct: 363 FRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAK 422
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
G + A FD + DK+V+ W++++ GY HG G E+I L+ M+ G+ PNDVTF+ L
Sbjct: 423 CGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGL 482
Query: 442 LFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
L AC ++GL EGW+LF M Y I PR +H++CVVDL R G L+ AYN + M I+P
Sbjct: 483 LTACKNSGLVEEGWDLFHRM-RDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEP 541
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRK 561
S+W A+L AC I+ + +LGE AA LF ++P + +YV LSN+Y ++ WD K R
Sbjct: 542 GVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLSNLYASSCLWDCVAKVRV 601
Query: 562 LMEERSLRKNPGYSFLQSSKK 582
LM E+ L K+ GYS ++ + K
Sbjct: 602 LMREKGLTKHLGYSVIEINGK 622
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 187/532 (35%), Positives = 317/532 (59%), Gaps = 3/532 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IH ++ G + + + ++ Y+K G++ A F + +VVSW A+I+G +
Sbjct: 205 IHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDC 264
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
++ AL++ M SG R N FT SSAL+ACA M + + GR + S+ K +LF
Sbjct: 265 NDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVG 324
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+D+Y+KC ++DA ++ + +KD+++WNA+I G + G + D+ LF M + + +
Sbjct: 325 LVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFN 384
Query: 232 CFTLGSILRASVGGIELMKI-SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
TL ++L+ SV ++ +K+ QIH + IK G+ S + SL+D Y K I A +++
Sbjct: 385 QTTLSTVLK-SVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIF 443
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
D+++ T++I+ +++ + +EA L+ M + D I +LN CAN+++
Sbjct: 444 EERTWEDLVAYTSMITAYSQYGD-GEEALKLYLQMQDADIKPDPFICSSLLNACANLSAY 502
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
G+Q+H A K+ D N+L++MYAK G I DA+RAF E+ ++ ++SW+++I GY
Sbjct: 503 EQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGY 562
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
A+HG+G EA+ L+ +M +G+ PN +T +S+L AC+H GL EG + F M + I P
Sbjct: 563 AQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPT 622
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
EH++C++DL R G+L A ++ + + +W A+LGA I+ N LG+ AA+ LF
Sbjct: 623 QEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLF 682
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
D+EPEKS +V+L+NIY +AG W+N K RK M++ ++K PG S+++ K
Sbjct: 683 DLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDK 734
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 170/540 (31%), Positives = 292/540 (54%), Gaps = 16/540 (2%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ S+L+ C K+ +H + G+ES+ ++ +++ YAK G + +R+ F +
Sbjct: 84 TFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGI 143
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
ERNVVSW A+ S Y Q+ A+ +F M+RSG+ N+F+ S L ACA ++ GR
Sbjct: 144 VERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGR 203
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I G + K + F +AL+D+Y+K G IE A +F+ I DVVSWNA+I G +
Sbjct: 204 KIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHD 263
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLESSNKL 269
ND + L M G +P+ FTL S L+ A++G EL + Q+H +IK+ S
Sbjct: 264 CNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGR--QLHSSLIKMDAHSDLFA 321
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
L+D+Y+K + A + Y SM K DII+ ALISG+++ +H +A LF M +
Sbjct: 322 AVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDH-LDAVSLFSKMFSED 380
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ + L +L A++ ++ + +QIH + K D V N+L+D Y K I +A+
Sbjct: 381 IDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEAS 440
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
+ F+E ++++++TS+I Y+++G G EA++LY +M+ + P+ SLL AC++
Sbjct: 441 KIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLS 500
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
+G +L I K+ + + +V+++A+ G +E A ++ + S WSA+
Sbjct: 501 AYEQGKQLHVHAI-KFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVS-WSAM 558
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSV--NYVVLSNIYTA---AGAWDNARKTRKLME 564
+G + +G+ G+ A R LF+ V N++ L ++ A AG + ++ + ME
Sbjct: 559 IGGYAQHGH---GKEALR-LFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKME 614
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 152/496 (30%), Positives = 251/496 (50%), Gaps = 34/496 (6%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HAH+I G+ + L ++ Y+K ARK D E +VVSW++++SGY QNG+
Sbjct: 3 LHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGF 62
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
E ALLVF+ M GV+ N+FT+ S L+AC+ R L GR + G F + FV +
Sbjct: 63 VEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANT 122
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+ +YAKCG ++D+ LF I ++VVSWNA+ ++ LF+ M+R G+ P+
Sbjct: 123 LVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPN 182
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
F++ IL A G E +IH L++K+GL+ +L+D+Y+K G I A +++
Sbjct: 183 EFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQ 242
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
+ D++S A+I+G D + A L +M + L L CA +
Sbjct: 243 DIAHPDVVSWNAIIAGCVLHDCNDL-ALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKE 301
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
LGRQ+H+ K + D L+DMY+K + DA RA+D M K++I+W +LI+GY+
Sbjct: 302 LGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYS 361
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS-----------HTGLTCEG----WE 456
+ G +A+ L+ KM E + N T ++L + + HT G +
Sbjct: 362 QCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFY 421
Query: 457 LFTDMINKY---------------RILPRAEHFSCVVDLFARRGQLESAYNMIRQM---N 498
+ +++ Y R ++ ++ +++ G E A + QM +
Sbjct: 422 VINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDAD 481
Query: 499 IKPTASLWSAILGACS 514
IKP + S++L AC+
Sbjct: 482 IKPDPFICSSLLNACA 497
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 140/270 (51%), Gaps = 1/270 (0%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
D + +T ++L+ +A + IH I +G S+ ++ ++ Y K + A
Sbjct: 380 DIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEA 439
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
K F+ ++V++T+MI+ Y+Q G E AL ++ M + ++ + F SS L ACA +
Sbjct: 440 SKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANL 499
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
+ G+ + K F+ ++F ++L+++YAKCG IEDA F I + +VSW+AMI
Sbjct: 500 SAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMI 559
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGL 263
GG A G ++ LF M+R G+ P+ TL S+L A + G+ + + G+
Sbjct: 560 GGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGI 619
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ + + +ID+ + G + A +L S+
Sbjct: 620 KPTQEHYACMIDLLGRSGKLNEAVELVNSI 649
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 138/271 (50%), Gaps = 7/271 (2%)
Query: 253 QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDD 312
++H +IK G L L+ +Y+K A +L + D++S ++L+SG+ ++
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQN- 60
Query: 313 NHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG 372
+EA +F +M L + ++ +L C+ LN+GR++H A D V
Sbjct: 61 GFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA 120
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
N L+ MYAK G + D+ R F + ++NV+SW +L + Y + EA+ L+K+M G++
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIM 180
Query: 433 PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFS--CVVDLFARRGQLESA 490
PN+ + +L AC+ G ++ M+ ++ + FS +VD++++ G++E A
Sbjct: 181 PNEFSISIILNACAGLQEGDLGRKIHGLML---KMGLDLDQFSANALVDMYSKAGEIEGA 237
Query: 491 YNMIRQMNIKPTASLWSAILGACSIYGNTSL 521
+ + + P W+AI+ C ++ L
Sbjct: 238 VAVFQDI-AHPDVVSWNAIIAGCVLHDCNDL 267
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 107/214 (50%), Gaps = 16/214 (7%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITN 59
+++ A + G ++ALK L D + P ++ SLL C + A Q +H H I
Sbjct: 456 SMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKF 515
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G+ ++ S ++ YAK G + A +AF +P R +VSW+AMI GYAQ+G+ + AL +F
Sbjct: 516 GFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLF 575
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLF-VK------SAL 172
+ MLR GV N T S L AC + G+ Q +E +F +K + +
Sbjct: 576 NQMLRDGVPPNHITLVSVLCACNHAGLVNEGK------QYFEKMEVMFGIKPTQEHYACM 629
Query: 173 LDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIG 205
+DL + G + +A L I D W A++G
Sbjct: 630 IDLLGRSGKLNEAVELVNSIPFEADGFVWGALLG 663
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 192/568 (33%), Positives = 318/568 (55%), Gaps = 13/568 (2%)
Query: 15 QALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIF 74
Q +F SC ++ C + +HA ++ GYE ++ + ++
Sbjct: 199 QPTEFGFSC------------VVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDM 246
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
Y K+G V A F++MP+ +VVSW A+ISG NG+D A+ + M SG+ N F
Sbjct: 247 YVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFML 306
Query: 135 SSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER 194
SS L+ACA GR I G + K + ++ L+D+YAK +++DA +F+ +
Sbjct: 307 SSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSH 366
Query: 195 KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQI 254
+D++ WNA+I G + G +D++F +F + ++G+ + TL ++L+++ Q+
Sbjct: 367 RDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQV 426
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH 314
H L K+G + LID Y K + A +++ DII+ T++I+ ++ D H
Sbjct: 427 HALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCD-H 485
Query: 315 SKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNA 374
+ A LF +M+ K + D +L +LN CA++++ G+Q+HA K Q DA GNA
Sbjct: 486 GEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNA 545
Query: 375 LIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
L+ YAK G I DA AF + ++ V+SW+++I G A+HG+G A+EL+ +M EG+ PN
Sbjct: 546 LVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPN 605
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI 494
+T S+L AC+H GL E F M + I EH+SC++DL R G+L+ A ++
Sbjct: 606 HITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELV 665
Query: 495 RQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWD 554
M + AS+W A+LGA ++ + LG+LAA LF +EPEKS +V+L+N Y ++G W+
Sbjct: 666 NSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWN 725
Query: 555 NARKTRKLMEERSLRKNPGYSFLQSSKK 582
K RKLM++ +++K P S+++ K
Sbjct: 726 EVAKVRKLMKDSNIKKEPAMSWVEVKDK 753
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 154/520 (29%), Positives = 272/520 (52%), Gaps = 13/520 (2%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM-PERNVVSWTAMISGYAQNG 110
+HA + G+ S++ ++ ++ Y G + AR+ FD ERN VSW ++S Y +N
Sbjct: 122 VHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKND 181
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
+A+ VF M+ SG++ +F +S + AC R + GR + + + + +++F +
Sbjct: 182 QCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTAN 241
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
AL+D+Y K G ++ A ++FE++ DVVSWNA+I G + G + + L M G+ P
Sbjct: 242 ALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVP 301
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
+ F L SIL+A G QIH +IK +S + + L+D+YAK + A +++
Sbjct: 302 NVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVF 361
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
M D+I ALISG + H EAF +F + + +G++ L +L A++ +
Sbjct: 362 DWMSHRDLILWNALISGCSHGGRHD-EAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAA 420
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
+ RQ+HA A K +DA V N LID Y K ++DA R F+E ++I+ TS+I
Sbjct: 421 SATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITAL 480
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
++ +G AI+L+ +M +G+ P+ SLL AC+ +G ++ +I K + +
Sbjct: 481 SQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLI-KRQFMSD 539
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
A + +V +A+ G +E A + + S WSA++G + +G+ A LF
Sbjct: 540 AFAGNALVYTYAKCGSIEDAELAFSSLPERGVVS-WSAMIGGLAQHGHGK----RALELF 594
Query: 531 DMEPEKSV--NYVVLSNIYTA---AGAWDNARKTRKLMEE 565
++ + N++ ++++ A AG D A++ M+E
Sbjct: 595 GRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKE 634
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 201/395 (50%), Gaps = 8/395 (2%)
Query: 49 AHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQ 108
AHL HA+++ +G+ ++L +I FY+K AR+ FD +P+ VSW+++++ Y+
Sbjct: 24 AHL-HANLLKSGFLASLR--NHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80
Query: 109 NGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFV 168
NG +A+ F M GV N+F L+ Q G + F ++FV
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDA---QLGAQVHAMAMATGFGSDVFV 137
Query: 169 KSALLDLYAKCGWIEDAWILFERI-ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
+AL+ +Y G+++DA +F+ ++ VSWN ++ D+ +F M+ G
Sbjct: 138 ANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
++P F ++ A G + Q+H +++++G E +L+D+Y K G + A
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIAS 257
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
++ M +D++S ALISG + H A +L M + + +L +L CA
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVL-NGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGA 316
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI 407
+ +LGRQIH F K + D +G L+DMYAK+ + DA + FD M +++I W +LI
Sbjct: 317 GAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALI 376
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
+G + G EA ++ ++ EG+ N T ++L
Sbjct: 377 SGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVL 411
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 194/415 (46%), Gaps = 19/415 (4%)
Query: 10 TGQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLHL 67
G +A++ L + L P+ +M S+L+ C A IH +I +S+ ++
Sbjct: 281 NGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYI 340
Query: 68 STKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV 127
++ YAK + A K FD M R+++ W A+ISG + G + A +F + + G+
Sbjct: 341 GVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGL 400
Query: 128 RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWI 187
N+ T ++ L++ A + R + +K F+ + V + L+D Y KC + DA
Sbjct: 401 GVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIR 460
Query: 188 LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIE 247
+FE D+++ +MI L+ + + LF M+R+G++PD F L S+L A
Sbjct: 461 VFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSA 520
Query: 248 LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG 307
+ Q+H +IK S +L+ YAK GSI A + S+ + ++S +A+I G
Sbjct: 521 YEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGG 580
Query: 308 FARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSY 367
A+ H K A +LF M+ + + + + + +L C + ++ + +Y +S
Sbjct: 581 LAQ-HGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK-------RYFNSM 632
Query: 368 DAAVG--------NALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKH 413
G + +ID+ ++G++ DA + M N W +L+ H
Sbjct: 633 KEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVH 687
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWT 404
A +L G +HA K S + A++ N LI Y+K A R FDE+ D +SW+
Sbjct: 15 AAAQALLPGAHLHANLLK--SGFLASLRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWS 72
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
SL+ Y+ +G AI+ + M+ EG+ N+ L ++ C
Sbjct: 73 SLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFA-LPVVLKC 112
>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 758
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 196/560 (35%), Positives = 312/560 (55%), Gaps = 10/560 (1%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y+ LLQ C+D ++ + ++H H++ G N + + ++ YAK G++ AR+ FD M
Sbjct: 70 YVPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNML 129
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
RNVV+WT ++ G+ QN ++A+ VF ML +G + +T S+ L AC+ ++ L+ G
Sbjct: 130 RRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQ 189
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF 212
I K + V SAL LY+KCG +EDA F RI K+V+SW + + A G
Sbjct: 190 FHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGA 249
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS 272
LF M+ +KP+ FTL S L + L +Q++ L IK G ES+ ++ S
Sbjct: 250 PVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNS 309
Query: 273 LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR-----DDNHS-----KEAFDLF 322
L+ +Y K G I A++L+ M +++ A+I+G A+ DN S EA LF
Sbjct: 310 LLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLF 369
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
+ L M D L +L++C+ + ++ G QIHA K D V +LI MY+K
Sbjct: 370 SKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKC 429
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
G I A++AF EM + +I+WTS+I G+++HG +A+ +++ M G+ PN VTF+ +L
Sbjct: 430 GSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVL 489
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
ACSH G+ + F M KY+I P +H+ C+VD+F R G+LE A N I++MN +P+
Sbjct: 490 SACSHAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPS 549
Query: 503 ASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKL 562
+WS + C +GN LG AA L ++P+ YV+L N+Y +A +++ + RK+
Sbjct: 550 EFIWSNFIAGCKSHGNLELGFYAAEQLLSLKPKDPETYVLLLNMYLSAERFEDVSRVRKM 609
Query: 563 MEERSLRKNPGYSFLQSSKK 582
MEE + K +S++ K
Sbjct: 610 MEEEKVGKLKDWSWISIKDK 629
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 203/402 (50%), Gaps = 20/402 (4%)
Query: 30 PSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
PS Y ++L C ++ + HA+II + + + + + Y+K G + A K
Sbjct: 166 PSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKT 225
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F R+ E+NV+SWT+ +S A NG L +F M+ ++ N+FT +SAL C + L
Sbjct: 226 FSRIREKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSL 285
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G + K + NL V+++LL LY K G I +A LF R++ +V+WNAMI G
Sbjct: 286 ELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGH 345
Query: 208 A--MQGFND---------DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHD 256
A M+ D ++ LF + GMKPD FTL S+L + + + QIH
Sbjct: 346 AQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHA 405
Query: 257 LIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSK 316
IK G S ++ SLI +Y+K GSI A + + M +I+ T++I+GF++ S+
Sbjct: 406 QTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRTMIAWTSMITGFSQ-HGMSQ 464
Query: 317 EAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGR---QIHAFAFKYQSSYDAAVGN 373
+A +F+DM L + + V +L+ C++ ++ +I +K + + D
Sbjct: 465 QALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPAMDHY--E 522
Query: 374 ALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHG 414
++DM+ + G + A +M + + W++ IAG HG
Sbjct: 523 CMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSHG 564
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 5/211 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T S+L C A Q IHA I G+ S++ +ST +I Y+K G + A KAF
Sbjct: 380 DLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAF 439
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL- 147
M R +++WT+MI+G++Q+G + AL +F M +GVR N T+ L AC+ +
Sbjct: 440 LEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVS 499
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI--ERKDVVSWNAMIG 205
Q + +K + + ++D++ + G +E A +++ E + + W+ I
Sbjct: 500 QALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFI-WSNFIA 558
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMK-PDCFTL 235
G G + F+ ++ K P+ + L
Sbjct: 559 GCKSHGNLELGFYAAEQLLSLKPKDPETYVL 589
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 198/550 (36%), Positives = 314/550 (57%), Gaps = 3/550 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ +L+ C + +H H+I G+ES++ + +I Y K GD+ SAR F
Sbjct: 194 DVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVF 253
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
DRMP R+ +SW AMISGY +N L +F M V + T +S + AC + +
Sbjct: 254 DRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDER 313
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
GR + G + K FV + V ++L+ +++ G ++A ++F ++E KD+VSW AMI G
Sbjct: 314 LGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYE 373
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G + + + M +G+ PD T+ S+L A G L K +H+ + GL S
Sbjct: 374 KNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVI 433
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ SLID+Y+K I A +++ + ++IS T++I G R + S EA F+ MIL
Sbjct: 434 VANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGL-RLNYRSFEALFFFQQMILS 492
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ + V L +L+ CA + +L+ G++IHA A + +D + NAL+DMY + G + A
Sbjct: 493 -LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPA 551
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
F+ +K+V SW L+ GYA+ G G A+EL+ KM + P+++TF SLL ACS +
Sbjct: 552 WNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRS 610
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
G+ +G E F M +K+ I P +H++ VVDL R G+LE AY I++M I P ++W A
Sbjct: 611 GMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGA 670
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L AC IY N LGELAA+++F+M+ + Y++L N+Y +G WD + RK+M E L
Sbjct: 671 LLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRL 730
Query: 569 RKNPGYSFLQ 578
+PG S+++
Sbjct: 731 TVDPGCSWVE 740
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 154/518 (29%), Positives = 263/518 (50%), Gaps = 21/518 (4%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
++ TY++LL+ C K+A + +H+++ + L ++ + + GD++ A
Sbjct: 92 VEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYV 151
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F +M ER++ SW ++ GYA+ GY + AL ++ ML G+R + +T+ LR C + L
Sbjct: 152 FGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDL 211
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
GR + + + F ++ V +AL+ +Y KCG I A ++F+R+ R+D +SWNAMI G
Sbjct: 212 ARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGY 271
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGLES 265
+ LF M + PD T+ S++ A ++G L + ++H +IK G +
Sbjct: 272 FENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGR--EVHGYVIKTGFVA 329
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ SLI +++ G A ++ M D++S TA+ISG+ ++ K A + + M
Sbjct: 330 EVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEK-AVETYTIM 388
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ + D++ + +L+ CA + L+ G +H FA + + V N+LIDMY+K I
Sbjct: 389 EHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCI 448
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A F + +KNVISWTS+I G + EA+ +++M + PN VT +S+L AC
Sbjct: 449 DKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSAC 507
Query: 446 SHTGLTCEGWELFTDMINKYR----ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
+ G G E+ + LP A ++D++ R G++E A+N K
Sbjct: 508 ARIGALSCGKEIHAHALRTGLGFDGFLPNA-----LLDMYVRCGRMEPAWNQFNSCE-KD 561
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVN 539
AS W+ +L Y G LA LF E VN
Sbjct: 562 VAS-WNILLTG---YAQQGKGGLAVE-LFHKMIESDVN 594
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 121/275 (44%), Gaps = 36/275 (13%)
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
++ +++ +L +C + + G ++H++ K + +GNAL+ M+ + G++ +A
Sbjct: 89 QVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEA 148
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS-- 446
F +M ++++ SW L+ GYAK GY EA+ LY +M G+ P+ TF +L C
Sbjct: 149 WYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGL 208
Query: 447 ---------HTGLTCEGWELFTDMINK-----------------YRILPRAEHFS---CV 477
H + G+E D++N + +PR + S +
Sbjct: 209 PDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMI 268
Query: 478 VDLFARRGQLES--AYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD--ME 533
F LE + M+R+ + P ++++ AC G+ LG +
Sbjct: 269 SGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFV 328
Query: 534 PEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
E SVN ++ ++++ G WD A ME + L
Sbjct: 329 AEVSVNNSLI-QMHSSVGCWDEAEMVFSKMEFKDL 362
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 192/568 (33%), Positives = 318/568 (55%), Gaps = 13/568 (2%)
Query: 15 QALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIF 74
Q +F SC ++ C + +HA ++ GYE ++ + ++
Sbjct: 106 QPTEFGFSC------------VVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDM 153
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
Y K+G V A F++MP+ +VVSW A+ISG NG+D A+ + M SG+ N F
Sbjct: 154 YVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFML 213
Query: 135 SSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER 194
SS L+ACA GR I G + K + ++ L+D+YAK +++DA +F+ +
Sbjct: 214 SSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSH 273
Query: 195 KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQI 254
+D++ WNA+I G + G +D++F +F + ++G+ + TL ++L+++ Q+
Sbjct: 274 RDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQV 333
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH 314
H L K+G + LID Y K + A +++ DII+ T++I+ ++ D H
Sbjct: 334 HALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCD-H 392
Query: 315 SKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNA 374
+ A LF +M+ K + D +L +LN CA++++ G+Q+HA K Q DA GNA
Sbjct: 393 GEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNA 452
Query: 375 LIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
L+ YAK G I DA AF + ++ V+SW+++I G A+HG+G A+EL+ +M EG+ PN
Sbjct: 453 LVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPN 512
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI 494
+T S+L AC+H GL E F M + I EH+SC++DL R G+L+ A ++
Sbjct: 513 HITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELV 572
Query: 495 RQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWD 554
M + AS+W A+LGA ++ + LG+LAA LF +EPEKS +V+L+N Y ++G W+
Sbjct: 573 NSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWN 632
Query: 555 NARKTRKLMEERSLRKNPGYSFLQSSKK 582
K RKLM++ +++K P S+++ K
Sbjct: 633 EVAKVRKLMKDSNIKKEPAMSWVEVKDK 660
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 154/520 (29%), Positives = 272/520 (52%), Gaps = 13/520 (2%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM-PERNVVSWTAMISGYAQNG 110
+HA + G+ S++ ++ ++ Y G + AR+ FD ERN VSW ++S Y +N
Sbjct: 29 VHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKND 88
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
+A+ VF M+ SG++ +F +S + AC R + GR + + + + +++F +
Sbjct: 89 QCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTAN 148
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
AL+D+Y K G ++ A ++FE++ DVVSWNA+I G + G + + L M G+ P
Sbjct: 149 ALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVP 208
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
+ F L SIL+A G QIH +IK +S + + L+D+YAK + A +++
Sbjct: 209 NVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVF 268
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
M D+I ALISG + H EAF +F + + +G++ L +L A++ +
Sbjct: 269 DWMSHRDLILWNALISGCSHGGRHD-EAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAA 327
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
+ RQ+HA A K +DA V N LID Y K ++DA R F+E ++I+ TS+I
Sbjct: 328 SATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITAL 387
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
++ +G AI+L+ +M +G+ P+ SLL AC+ +G ++ +I K + +
Sbjct: 388 SQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLI-KRQFMSD 446
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
A + +V +A+ G +E A + + S WSA++G + +G+ A LF
Sbjct: 447 AFAGNALVYTYAKCGSIEDAELAFSSLPERGVVS-WSAMIGGLAQHGHGK----RALELF 501
Query: 531 DMEPEKSV--NYVVLSNIYTA---AGAWDNARKTRKLMEE 565
++ + N++ ++++ A AG D A++ M+E
Sbjct: 502 GRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKE 541
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 157/322 (48%), Gaps = 5/322 (1%)
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
M GV N+F L+ Q G + F ++FV +AL+ +Y G+
Sbjct: 1 MRAEGVCCNEFALPVVLKCVPDA---QLGAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57
Query: 182 IEDAWILFERI-ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
++DA +F+ ++ VSWN ++ D+ +F M+ G++P F ++
Sbjct: 58 MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 117
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
A G + Q+H +++++G E +L+D+Y K G + A ++ M +D++S
Sbjct: 118 ACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVS 177
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
ALISG + H A +L M + + +L +L CA + +LGRQIH F
Sbjct: 178 WNALISGCVL-NGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFM 236
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
K + D +G L+DMYAK+ + DA + FD M +++I W +LI+G + G EA
Sbjct: 237 IKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAF 296
Query: 421 ELYKKMKHEGMVPNDVTFLSLL 442
++ ++ EG+ N T ++L
Sbjct: 297 SIFYGLRKEGLGVNRTTLAAVL 318
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 194/415 (46%), Gaps = 19/415 (4%)
Query: 10 TGQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLHL 67
G +A++ L + L P+ +M S+L+ C A IH +I +S+ ++
Sbjct: 188 NGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYI 247
Query: 68 STKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV 127
++ YAK + A K FD M R+++ W A+ISG + G + A +F + + G+
Sbjct: 248 GVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGL 307
Query: 128 RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWI 187
N+ T ++ L++ A + R + +K F+ + V + L+D Y KC + DA
Sbjct: 308 GVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIR 367
Query: 188 LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIE 247
+FE D+++ +MI L+ + + LF M+R+G++PD F L S+L A
Sbjct: 368 VFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSA 427
Query: 248 LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG 307
+ Q+H +IK S +L+ YAK GSI A + S+ + ++S +A+I G
Sbjct: 428 YEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGG 487
Query: 308 FARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSY 367
A+ H K A +LF M+ + + + + + +L C + ++ + +Y +S
Sbjct: 488 LAQ-HGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK-------RYFNSM 539
Query: 368 DAAVG--------NALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKH 413
G + +ID+ ++G++ DA + M N W +L+ H
Sbjct: 540 KEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVH 594
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 14/224 (6%)
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTS 405
V LG Q+HA A D V NAL+ MY G + DA R FDE G ++N +SW
Sbjct: 20 VPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNG 79
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
L++ Y K+ +AI+++ +M G+ P + F ++ AC+ + G ++ ++
Sbjct: 80 LMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVV--- 136
Query: 466 RILPRAEHFS--CVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGE 523
R+ + F+ +VD++ + G+++ A + +M S W+A++ C + G+
Sbjct: 137 RMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVS-WNALISGCVLNGHD---H 192
Query: 524 LAARNLFDMEPEKSV-NYVVLSNIYTA---AGAWDNARKTRKLM 563
A L M+ V N +LS+I A AGA+D R+ M
Sbjct: 193 RAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFM 236
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 192/568 (33%), Positives = 319/568 (56%), Gaps = 13/568 (2%)
Query: 15 QALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIF 74
Q +F SC ++ C + +HA ++ GY+ ++ + ++
Sbjct: 199 QPTEFGFSC------------VVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDM 246
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
Y K+G V A F++MP+ +VVSW A+ISG NG+D A+ + M SG+ N FT
Sbjct: 247 YMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTL 306
Query: 135 SSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER 194
SS L+AC+ GR I G + K + ++ L+D+YAK +++DA +F+ +
Sbjct: 307 SSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFH 366
Query: 195 KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQI 254
+D++ NA+I G + G +D++ LF + ++G+ + TL ++L+++ Q+
Sbjct: 367 RDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQV 426
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH 314
H L +K+G + LID Y K + A +++ DII+CT++I+ ++ D H
Sbjct: 427 HALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCD-H 485
Query: 315 SKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNA 374
+ A LF +M+ K + D +L +LN CA++++ G+Q+HA K Q DA GNA
Sbjct: 486 GEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNA 545
Query: 375 LIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
L+ YAK G I DA AF + ++ V+SW+++I G A+HG+G A+EL+ +M EG+ PN
Sbjct: 546 LVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPN 605
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI 494
+T S+L AC+H GL E F M + I EH+SC++DL R G+L+ A ++
Sbjct: 606 HITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELV 665
Query: 495 RQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWD 554
M + AS+W A+LGA ++ + LG+LAA LF +EPEKS +V+L+N Y +AG W+
Sbjct: 666 NSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWN 725
Query: 555 NARKTRKLMEERSLRKNPGYSFLQSSKK 582
K RKLM++ +++K P S+++ K
Sbjct: 726 EVAKVRKLMKDSNIKKEPAMSWIEVKDK 753
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 156/520 (30%), Positives = 276/520 (53%), Gaps = 13/520 (2%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM-PERNVVSWTAMISGYAQNG 110
+HA + G+ S++ ++ ++ Y G + AR+ F+ ERN VSW ++S Y +N
Sbjct: 122 VHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKND 181
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
+A+ VF M+ SG++ +F +S + AC R ++ GR + + + + +++F +
Sbjct: 182 QCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTAN 241
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
AL+D+Y K G ++ A ++FE++ DVVSWNA+I G + G + + L M G+ P
Sbjct: 242 ALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVP 301
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
+ FTL SIL+A G QIH +IK +S + + L+D+YAK + A +++
Sbjct: 302 NVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVF 361
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
M D+I C ALISG + H EA LF ++ + +G++ L +L A++ +
Sbjct: 362 DWMFHRDLILCNALISGCSHGGRHD-EALSLFYELRKEGLGVNRTTLAAVLKSTASLEAA 420
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
+ RQ+HA A K +DA V N LID Y K ++DANR F+E ++I+ TS+I
Sbjct: 421 STTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITAL 480
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
++ +G AI+L+ +M +G+ P+ SLL AC+ +G ++ +I K + +
Sbjct: 481 SQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLI-KRQFMSD 539
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
A + +V +A+ G +E A + + S WSA++G + +G+ A LF
Sbjct: 540 AFAGNALVYTYAKCGSIEDAELAFSSLPERGVVS-WSAMIGGLAQHGHGK----RALELF 594
Query: 531 DMEPEKSV--NYVVLSNIYTA---AGAWDNARKTRKLMEE 565
++ + N++ ++++ A AG D A++ M+E
Sbjct: 595 GRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKE 634
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 197/395 (49%), Gaps = 8/395 (2%)
Query: 49 AHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQ 108
AHL HA ++ +G S +I FY+K AR+ FD +P+ VSW+++++ Y+
Sbjct: 24 AHL-HASLLKSG--SLASFRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSN 80
Query: 109 NGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFV 168
NG +A+ F M GV N+F L+ R G + F ++FV
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARL---GAQVHAMAMATGFGSDVFV 137
Query: 169 KSALLDLYAKCGWIEDAWILF-ERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
+AL+ +Y G+++DA +F E ++ VSWN ++ D+ +F M+ G
Sbjct: 138 ANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
++P F ++ A G + Q+H +++++G + +L+D+Y K G + A
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIAS 257
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
++ M +D++S ALISG + H A +L M + + L +L C+
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVL-NGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGA 316
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI 407
+ +LGRQIH F K + D +G L+DMYAK+ + DA + FD M +++I +LI
Sbjct: 317 GAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALI 376
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
+G + G EA+ L+ +++ EG+ N T ++L
Sbjct: 377 SGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVL 411
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 191/411 (46%), Gaps = 21/411 (5%)
Query: 12 QLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKV 71
+L +K+S P+ T S+L+ C A IH +I +S+ ++ +
Sbjct: 289 ELLLQMKYSGLVPNVF----TLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGL 344
Query: 72 IIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQ 131
+ YAK + ARK FD M R+++ A+ISG + G + AL +F + + G+ N+
Sbjct: 345 VDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNR 404
Query: 132 FTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER 191
T ++ L++ A + R + K F+ + V + L+D Y KC + DA +FE
Sbjct: 405 TTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEE 464
Query: 192 IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI 251
D+++ +MI L+ + + LF M+R+G++PD F L S+L A +
Sbjct: 465 CSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQG 524
Query: 252 SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD 311
Q+H +IK S +L+ YAK GSI A + S+ + ++S +A+I G A+
Sbjct: 525 KQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQ- 583
Query: 312 DNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAV 371
H K A +LF M+ + + + + + +L C + ++ + +Y +S
Sbjct: 584 HGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK-------RYFNSMKEMF 636
Query: 372 G--------NALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKH 413
G + +ID+ ++G++ DA + M N W +L+ H
Sbjct: 637 GIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVH 687
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWT 404
A +L G +HA K S A+ N LI Y+K A R FDE+ D +SW+
Sbjct: 15 AAAQALLPGAHLHASLLKSGSL--ASFRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWS 72
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
SL+ Y+ +G AI+ + M+ EG+ N+ L ++ C
Sbjct: 73 SLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFA-LPVVLKC 112
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 192/568 (33%), Positives = 319/568 (56%), Gaps = 13/568 (2%)
Query: 15 QALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIF 74
Q +F SC ++ C + +HA ++ GY+ ++ + ++
Sbjct: 199 QPTEFGFSC------------VVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDM 246
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
Y K+G V A F++MP+ +VVSW A+ISG NG+D A+ + M SG+ N FT
Sbjct: 247 YMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTL 306
Query: 135 SSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER 194
SS L+AC+ GR I G + K + ++ L+D+YAK +++DA +F+ +
Sbjct: 307 SSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFH 366
Query: 195 KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQI 254
+D++ NA+I G + G +D++ LF + ++G+ + TL ++L+++ Q+
Sbjct: 367 RDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQV 426
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH 314
H L +K+G + LID Y K + A +++ DII+CT++I+ ++ D H
Sbjct: 427 HALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCD-H 485
Query: 315 SKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNA 374
+ A LF +M+ K + D +L +LN CA++++ G+Q+HA K Q DA GNA
Sbjct: 486 GEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNA 545
Query: 375 LIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
L+ YAK G I DA AF + ++ V+SW+++I G A+HG+G A+EL+ +M EG+ PN
Sbjct: 546 LVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPN 605
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI 494
+T S+L AC+H GL E F M + I EH+SC++DL R G+L+ A ++
Sbjct: 606 HITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELV 665
Query: 495 RQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWD 554
M + AS+W A+LGA ++ + LG+LAA LF +EPEKS +V+L+N Y +AG W+
Sbjct: 666 NSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWN 725
Query: 555 NARKTRKLMEERSLRKNPGYSFLQSSKK 582
K RKLM++ +++K P S+++ K
Sbjct: 726 EVAKVRKLMKDSNIKKEPAMSWIEVKDK 753
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 156/520 (30%), Positives = 276/520 (53%), Gaps = 13/520 (2%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM-PERNVVSWTAMISGYAQNG 110
+HA + G+ S++ ++ ++ Y G + AR+ F+ ERN VSW ++S Y +N
Sbjct: 122 VHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKND 181
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
+A+ VF M+ SG++ +F +S + AC R ++ GR + + + + +++F +
Sbjct: 182 QCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTAN 241
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
AL+D+Y K G ++ A ++FE++ DVVSWNA+I G + G + + L M G+ P
Sbjct: 242 ALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVP 301
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
+ FTL SIL+A G QIH +IK +S + + L+D+YAK + A +++
Sbjct: 302 NVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVF 361
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
M D+I C ALISG + H EA LF ++ + +G++ L +L A++ +
Sbjct: 362 DWMFHRDLILCNALISGCSHGGRHD-EALSLFYELRKEGLGVNRTTLAAVLKSTASLEAA 420
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
+ RQ+HA A K +DA V N LID Y K ++DANR F+E ++I+ TS+I
Sbjct: 421 STTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITAL 480
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
++ +G AI+L+ +M +G+ P+ SLL AC+ +G ++ +I K + +
Sbjct: 481 SQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLI-KRQFMSD 539
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
A + +V +A+ G +E A + + S WSA++G + +G+ A LF
Sbjct: 540 AFAGNALVYTYAKCGSIEDAELAFSSLPERGVVS-WSAMIGGLAQHGHGK----RALELF 594
Query: 531 DMEPEKSV--NYVVLSNIYTA---AGAWDNARKTRKLMEE 565
++ + N++ ++++ A AG D A++ M+E
Sbjct: 595 GRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKE 634
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 197/395 (49%), Gaps = 8/395 (2%)
Query: 49 AHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQ 108
AHL HA ++ +G S +I FY+K AR+ FD +P+ VSW+++++ Y+
Sbjct: 24 AHL-HASLLKSG--SLASFRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80
Query: 109 NGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFV 168
NG +A+ F M GV N+F L+ R G + F ++FV
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARL---GAQVHAMAMATGFGSDVFV 137
Query: 169 KSALLDLYAKCGWIEDAWILF-ERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
+AL+ +Y G+++DA +F E ++ VSWN ++ D+ +F M+ G
Sbjct: 138 ANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
++P F ++ A G + Q+H +++++G + +L+D+Y K G + A
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIAS 257
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
++ M +D++S ALISG + H A +L M + + L +L C+
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVL-NGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGA 316
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI 407
+ +LGRQIH F K + D +G L+DMYAK+ + DA + FD M +++I +LI
Sbjct: 317 GAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALI 376
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
+G + G EA+ L+ +++ EG+ N T ++L
Sbjct: 377 SGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVL 411
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 191/411 (46%), Gaps = 21/411 (5%)
Query: 12 QLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKV 71
+L +K+S P+ T S+L+ C A IH +I +S+ ++ +
Sbjct: 289 ELLLQMKYSGLVPNVF----TLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGL 344
Query: 72 IIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQ 131
+ YAK + ARK FD M R+++ A+ISG + G + AL +F + + G+ N+
Sbjct: 345 VDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNR 404
Query: 132 FTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER 191
T ++ L++ A + R + K F+ + V + L+D Y KC + DA +FE
Sbjct: 405 TTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEE 464
Query: 192 IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI 251
D+++ +MI L+ + + LF M+R+G++PD F L S+L A +
Sbjct: 465 CSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQG 524
Query: 252 SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD 311
Q+H +IK S +L+ YAK GSI A + S+ + ++S +A+I G A+
Sbjct: 525 KQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQ- 583
Query: 312 DNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAV 371
H K A +LF M+ + + + + + +L C + ++ + +Y +S
Sbjct: 584 HGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK-------RYFNSMKEMF 636
Query: 372 G--------NALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKH 413
G + +ID+ ++G++ DA + M N W +L+ H
Sbjct: 637 GIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVH 687
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWT 404
A +L G +HA K S A+ N LI Y+K A R FDE+ D +SW+
Sbjct: 15 AAAQALLPGAHLHASLLKSGSL--ASFRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWS 72
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
SL+ Y+ +G AI+ + M+ EG+ N+ L ++ C
Sbjct: 73 SLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFA-LPVVLKC 112
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 208/572 (36%), Positives = 309/572 (54%), Gaps = 3/572 (0%)
Query: 9 KTGQLKQALK-FSLSCPDTL-LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ G +AL+ F C D L D T SLL C A H++ I G S++
Sbjct: 349 QQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDII 408
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
L ++ Y K D+ +A + F NVV W M+ Y + +F+ M G
Sbjct: 409 LEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEG 468
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
+ NQFTY S LR C+ +R + G I + K F N++V S L+D+YAK G ++ A
Sbjct: 469 IEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHAL 528
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+F R++ KDVVSW AMI G A ++ LF+ M QG+ D S + A G
Sbjct: 529 KIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQ 588
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
L + QIH G + +L+ +YA+ G +R AY + + D IS +LIS
Sbjct: 589 ALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLIS 648
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
GFA+ H +EA LF M I+ ++ ANVA++ LG+QIHA K
Sbjct: 649 GFAQS-GHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHD 707
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
+ V N LI +YAK G I DA R F EM +KN ISW +++ GY++HG+G +A+ L++ M
Sbjct: 708 SETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDM 767
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
K G++PN VTF+ +L ACSH GL EG + F M + ++P+ EH++CVVDL R G
Sbjct: 768 KQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGL 827
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
L A + +M I+P A + +L AC ++ N +GE AA +L ++EP+ S YV+LSN+
Sbjct: 828 LSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNM 887
Query: 547 YTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
Y G W +TR++M++R ++K PG S+++
Sbjct: 888 YAVTGKWGCRDRTRQMMKDRGVKKEPGRSWIE 919
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 158/489 (32%), Positives = 271/489 (55%), Gaps = 13/489 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQ-AHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
D TY +L+ C IHA IT+GYE++L + +I Y K G + SA+K
Sbjct: 168 DERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKV 227
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD + +R+ VSW AM+SG +Q+G +E A+L+F M SGV + +SS L AC ++ +
Sbjct: 228 FDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFY 287
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G + G + K F +V +AL+ LY++ G A +F + ++D VS+N++I GL
Sbjct: 288 KVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGL 347
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGLES 265
+ QG++D + LF+ M +KPDC T+ S+L A SVG + + K Q H IK G+ S
Sbjct: 348 SQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGK--QFHSYAIKAGMSS 405
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
L G+L+D+Y K I++A++ + S +++ ++ + DN + E+F +F M
Sbjct: 406 DIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLN-ESFKIFTQM 464
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
++ + + +L C+++ +++LG QIH K ++ V + LIDMYAK G++
Sbjct: 465 QMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKL 524
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A + F + +K+V+SWT++IAGYA+H EA+ L+K+M+ +G+ +++ F S + AC
Sbjct: 525 DHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISAC 584
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFS---CVVDLFARRGQLESAYNMIRQMNIKPT 502
+ +G ++ + ++ S +V L+AR G++ AY ++ K
Sbjct: 585 AGIQALNQGQQIHAQAC----VSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDN 640
Query: 503 ASLWSAILG 511
S S I G
Sbjct: 641 ISWNSLISG 649
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 138/497 (27%), Positives = 253/497 (50%), Gaps = 28/497 (5%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
+ TY+ LL C+ +H I+ G+ + + L +++ Y GD+ A F
Sbjct: 67 NSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVF 126
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D MP R + W ++ + L +F ML+ V+ ++ TY+ LR C
Sbjct: 127 DEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCG------ 180
Query: 149 GGRMIQGSIQKGR-------FVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN 201
GG + ++K + +LFV + L+DLY K G++ A +F+ ++++D VSW
Sbjct: 181 GGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWV 240
Query: 202 AMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI-SQIHDLIIK 260
AM+ GL+ G +++ LF M G+ P + S+L A +E K+ Q+H L++K
Sbjct: 241 AMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACT-KVEFYKVGEQLHGLVLK 299
Query: 261 LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFD 320
G + +L+ +Y++ G+ A Q++ +ML+ D +S +LISG ++ +S +A +
Sbjct: 300 QGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQ-QGYSDKALE 358
Query: 321 LFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYA 380
LFK M L + D V + +L+ C++V +L +G+Q H++A K S D + AL+D+Y
Sbjct: 359 LFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYV 418
Query: 381 KSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
K +I A+ F +NV+ W ++ Y +E+ +++ +M+ EG+ PN T+ S
Sbjct: 419 KCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPS 478
Query: 441 LLFACSHTGLTCEGWELFTDMINKYRILPRAEHF-----SCVVDLFARRGQLESAYNMIR 495
+L CS G ++ T ++L F S ++D++A+ G+L+ A + R
Sbjct: 479 ILRTCSSLRAVDLGEQIHT------QVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFR 532
Query: 496 QMNIKPTASLWSAILGA 512
++ K S W+A++
Sbjct: 533 RLKEKDVVS-WTAMIAG 548
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 138/517 (26%), Positives = 229/517 (44%), Gaps = 42/517 (8%)
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F + E N TA+ Y+ + + N + M GVRAN TY L C W
Sbjct: 29 FQKFLEHN----TALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWF 84
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G + G I K F + + L+DLY G ++ A +F+ + + + WN ++
Sbjct: 85 SDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRF 144
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGG-IELMKISQIHDLIIKLGLESS 266
LFR M+++ +KPD T +LR GG + + +IH I G E+S
Sbjct: 145 VAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENS 204
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ LID+Y K G + SA +++ + K D +S A++SG ++ +EA LF M
Sbjct: 205 LFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQ-SGCEEEAVLLFCQMH 263
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ I +L+ C V +G Q+H K S + V NAL+ +Y++ G
Sbjct: 264 TSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFI 323
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A + F+ M ++ +S+ SLI+G ++ GY +A+EL+KKM + + P+ VT SLL ACS
Sbjct: 324 PAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACS 383
Query: 447 HTGLTCEGWELFT------------------DMINKYRILPRAEHF------------SC 476
G G + + D+ K + A F +
Sbjct: 384 SVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNV 443
Query: 477 VVDLFARRGQLESAYNMIRQMN---IKPTASLWSAILGACSIYGNTSLGELAARNLFDME 533
++ + L ++ + QM I+P + +IL CS LGE +
Sbjct: 444 MLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTG 503
Query: 534 PEKSVNYV--VLSNIYTAAGAWDNARKTRKLMEERSL 568
+ +V YV VL ++Y G D+A K + ++E+ +
Sbjct: 504 FQFNV-YVSSVLIDMYAKLGKLDHALKIFRRLKEKDV 539
>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 846
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 193/552 (34%), Positives = 325/552 (58%), Gaps = 1/552 (0%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
++++ TY +L C + +H +I +G+E + ++ ++ Y+K G++ AR
Sbjct: 242 SMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDAR 301
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
K F+ MP+ + V+W +I+GY QNG+ + A +F+AM+ +GV+ + T++S L +
Sbjct: 302 KLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESG 361
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
L+ + + I + R ++++KSAL+D+Y K G +E A +F++ DV AMI
Sbjct: 362 SLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMIS 421
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
G + G N D+ FR ++++GM P+ T+ S+L A L ++H I+K LE+
Sbjct: 422 GYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQLEN 481
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ ++ D+YAK G + AY+ +R M +TD I ++IS F+++ + A DLF+ M
Sbjct: 482 IVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGK-PEMAVDLFRQM 540
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ D V L L+ AN+ +L G+++H + + S D V +ALIDMY+K G++
Sbjct: 541 GMSGAKFDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVASALIDMYSKCGKL 600
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A A F+ M KN +SW S+IA Y HG E ++L+ +M G+ P+ VTFL ++ AC
Sbjct: 601 ALARCVFNLMAGKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDHVTFLVIISAC 660
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
H GL EG F M +Y I R EH++C+VDL+ R G+L A++ I+ M P A +
Sbjct: 661 GHAGLVGEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRLHEAFDAIKSMPFTPDAGV 720
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
W +LGAC ++GN L +LA+R+L +++P+ S YV+LSN++ AG W + K R+LM+E
Sbjct: 721 WGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWGSVLKVRRLMKE 780
Query: 566 RSLRKNPGYSFL 577
+ ++K PGYS++
Sbjct: 781 KGVQKIPGYSWI 792
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 144/527 (27%), Positives = 259/527 (49%), Gaps = 11/527 (2%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPST--YM-----SLLQFCIDKKAERQAHLIHA 54
+I R F +L S+ C + + P T Y+ SL + C D +QA +H
Sbjct: 10 SIFRLAFSRSKLMHTAGTSI-CNNVMSKPETQDYLTTQLESLFRACSDASVVQQARQVHT 68
Query: 55 HIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDEN 114
II G LS++V+ Y G + F + N + W MI G G+ +
Sbjct: 69 QIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELCNALPWNWMIRGLYMLGWFDF 128
Query: 115 ALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLD 174
ALL + ML S V +++T+ ++AC + + ++ + + F +LFV SAL+
Sbjct: 129 ALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIK 188
Query: 175 LYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFT 234
LYA G+I DA +F+ + ++D + WN M+ G G +++ F M + T
Sbjct: 189 LYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVT 248
Query: 235 LGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML 294
IL + +Q+H L+I G E ++ +L+ +Y+K G++ A +L+ +M
Sbjct: 249 YTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMP 308
Query: 295 KTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGR 354
+TD ++ LI+G+ + + + EA LF MI + D V L SL +
Sbjct: 309 QTDTVTWNGLIAGYVQ-NGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCK 367
Query: 355 QIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG 414
++H++ +++ +D + +ALID+Y K G++ A + F + +V T++I+GY HG
Sbjct: 368 EVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHG 427
Query: 415 YGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF 474
+AI ++ + EGMVPN +T S+L AC+ G EL D++ K ++
Sbjct: 428 LNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKK-QLENIVNVG 486
Query: 475 SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSL 521
S + D++A+ G+L+ AY R+M+ + + W++++ + S G +
Sbjct: 487 SAITDMYAKCGRLDLAYEFFRRMS-ETDSICWNSMISSFSQNGKPEM 532
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 215/430 (50%), Gaps = 3/430 (0%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNG 60
++R + G AL F + + P T+ +++ C ++H + G
Sbjct: 116 MIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTARSLG 175
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+ +L + + +I YA G + AR+ FD +P+R+ + W M+ GY ++G NA+ F
Sbjct: 176 FHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFC 235
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M S N TY+ L CA G + G + F + V + L+ +Y+KCG
Sbjct: 236 GMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCG 295
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+ DA LF + + D V+WN +I G GF D++ LF +M+ G+KPD T S L
Sbjct: 296 NLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLP 355
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
+ + L ++H I++ + L +LID+Y K G + A ++++ D+
Sbjct: 356 SILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAV 415
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
CTA+ISG+ + +A + F+ +I + M + + + +L CA +A+L LG+++H
Sbjct: 416 CTAMISGYVL-HGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDI 474
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
K Q VG+A+ DMYAK G + A F M + + I W S+I+ ++++G A+
Sbjct: 475 LKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAV 534
Query: 421 ELYKKMKHEG 430
+L+++M G
Sbjct: 535 DLFRQMGMSG 544
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 195/573 (34%), Positives = 320/573 (55%), Gaps = 3/573 (0%)
Query: 9 KTGQLKQALKFSLSC--PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ Q QAL F L ++P + +LL+ + +HA + G+ ++
Sbjct: 113 RDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAF 172
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ T +I Y+ G+V AR FD + +++VSWT M++ YA+N + E +L +F+ M G
Sbjct: 173 VGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMG 232
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
+ N FT S AL++C + G+ + G KG + +LFV ALL+LYAK G I DA
Sbjct: 233 YKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQ 292
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
LFE + + D++ W+ MI A + ++ LF M + + P+ FT S+L+A +
Sbjct: 293 RLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSV 352
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
L QIH ++K GL S+ ++ +++DVYAK G I ++ +L+ + + ++ +I
Sbjct: 353 SLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIV 412
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
G+ + + + A +LF M+ M +V +L A++A+L G QIH+ K +
Sbjct: 413 GYVQLGD-GERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYN 471
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
D V N+LIDMYAK G I DA FD+M ++ +SW ++I GY+ HG EA+ L+ M
Sbjct: 472 KDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMM 531
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
+H PN +TF+ +L ACS+ GL +G F M Y I P EH++C+V L R G+
Sbjct: 532 QHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGR 591
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
+ A +I ++ +P+ +W A+LGAC I+ LG + A+++ +MEP +V+LSN+
Sbjct: 592 FDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNM 651
Query: 547 YTAAGAWDNARKTRKLMEERSLRKNPGYSFLQS 579
Y AG WDN RK M+++ +RK PG S++++
Sbjct: 652 YATAGRWDNVAFVRKYMQKKKVRKEPGLSWVEN 684
Score = 231 bits (589), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 162/540 (30%), Positives = 276/540 (51%), Gaps = 23/540 (4%)
Query: 2 NIVRANFKTGQL-KQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQA--HLIHAHIIT 58
IVR + K QL Q + LD +Y +LQ I A+ A HL H HI+
Sbjct: 5 TIVRDSTKLSQLLHQCRNIHHQQCLSALDSHSYAHMLQQIIRNGADPIAGKHL-HCHILK 63
Query: 59 NGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLV 118
G +L ++ FY + + A K FD MP+ N +S+ + GY+++ AL
Sbjct: 64 RGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHF 123
Query: 119 FSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
+ + G N F +++ L+ M + + K + FV +AL+D Y+
Sbjct: 124 ILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSV 183
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
G ++ A +F+ I KD+VSW M+ A F ++S LF M G KP+ FT+
Sbjct: 184 RGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGA 243
Query: 239 LRASVGGIELMKISQ-IHDLIIKLGLESSNKLTG-SLIDVYAKYGSIRSAYQLYRSMLKT 296
L++ + G+E + + +H +K G + G +L+++YAK G I A +L+ M KT
Sbjct: 244 LKSCL-GLEAFNVGKSVHGCALK-GCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKT 301
Query: 297 DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI 356
D+I + +I+ +A+ D SKEA DLF M + ++ +L CA+ SL+LG+QI
Sbjct: 302 DLIPWSLMIARYAQSDR-SKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQI 360
Query: 357 HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYG 416
H+ K+ + + V NA++D+YAK GEI ++ + F+E+ D+N ++W ++I GY + G G
Sbjct: 361 HSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDG 420
Query: 417 HEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFT----DMINKYRILPRAE 472
A+ L+ M M P +VT+ S+L A + G ++ + M NK ++ +
Sbjct: 421 ERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANS- 479
Query: 473 HFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDM 532
++D++A+ G++ A +MN + S W+A++ S++G + + A NLFDM
Sbjct: 480 ----LIDMYAKCGRINDARLTFDKMNKRDEVS-WNAMICGYSMHGMS----MEALNLFDM 530
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 198/550 (36%), Positives = 314/550 (57%), Gaps = 3/550 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ +L+ C + +H H+I G+ES++ + +I Y K GD+ SAR F
Sbjct: 194 DVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVF 253
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
DRMP R+ +SW AMISGY +N L +F M V + T +S + AC + +
Sbjct: 254 DRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDER 313
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
GR + G + K FV + V ++L+ +++ G ++A ++F ++E KD+VSW AMI G
Sbjct: 314 LGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYE 373
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G + + + M +G+ PD T+ S+L A G L K +H+ + GL S
Sbjct: 374 KNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVI 433
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ SLID+Y+K I A +++ + ++IS T++I G R + S EA F+ MIL
Sbjct: 434 VANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGL-RLNYRSFEALFFFQQMILS 492
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ + V L +L+ CA + +L+ G++IHA A + +D + NAL+DMY + G + A
Sbjct: 493 -LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPA 551
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
F+ +K+V SW L+ GYA+ G G A+EL+ KM + P+++TF SLL ACS +
Sbjct: 552 WNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRS 610
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
G+ +G E F M +K+ I P +H++ VVDL R G+LE AY I++M I P ++W A
Sbjct: 611 GMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGA 670
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L AC IY N LGELAA+++F+M+ + Y++L N+Y +G WD + RK+M E L
Sbjct: 671 LLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRL 730
Query: 569 RKNPGYSFLQ 578
+PG S+++
Sbjct: 731 TVDPGCSWVE 740
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 154/518 (29%), Positives = 263/518 (50%), Gaps = 21/518 (4%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
++ TY++LL+ C K+A + +H+++ + L ++ + + GD++ A
Sbjct: 92 VEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYV 151
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F +M ER++ SW ++ GYA+ GY + AL ++ ML G+R + +T+ LR C + L
Sbjct: 152 FGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDL 211
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
GR + + + F ++ V +AL+ +Y KCG I A ++F+R+ R+D +SWNAMI G
Sbjct: 212 ARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGY 271
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGLES 265
+ LF M + PD T+ S++ A ++G L + ++H +IK G +
Sbjct: 272 FENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGR--EVHGYVIKTGFVA 329
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ SLI +++ G A ++ M D++S TA+ISG+ ++ K A + + M
Sbjct: 330 EVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEK-AVETYTIM 388
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ + D++ + +L+ CA + L+ G +H FA + + V N+LIDMY+K I
Sbjct: 389 EHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCI 448
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A F + +KNVISWTS+I G + EA+ +++M + PN VT +S+L AC
Sbjct: 449 DKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSAC 507
Query: 446 SHTGLTCEGWELFTDMINKY----RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
+ G G E+ + LP A ++D++ R G++E A+N K
Sbjct: 508 ARIGALSCGKEIHAHALRTGLGFDGFLPNA-----LLDMYVRCGRMEPAWNQFNSCE-KD 561
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVN 539
AS W+ +L Y G LA LF E VN
Sbjct: 562 VAS-WNILLTG---YAQQGKGGLAVE-LFHKMIESDVN 594
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 121/275 (44%), Gaps = 36/275 (13%)
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
++ +++ +L +C + + G ++H++ K + +GNAL+ M+ + G++ +A
Sbjct: 89 QVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEA 148
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS-- 446
F +M ++++ SW L+ GYAK GY EA+ LY +M G+ P+ TF +L C
Sbjct: 149 WYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGL 208
Query: 447 ---------HTGLTCEGWELFTDMINK-----------------YRILPRAEHFS---CV 477
H + G+E D++N + +PR + S +
Sbjct: 209 PDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMI 268
Query: 478 VDLFARRGQLES--AYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD--ME 533
F LE + M+R+ + P ++++ AC G+ LG +
Sbjct: 269 SGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFV 328
Query: 534 PEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
E SVN ++ ++++ G WD A ME + L
Sbjct: 329 AEVSVNNSLI-QMHSSVGCWDEAEMVFSKMEFKDL 362
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 198/548 (36%), Positives = 311/548 (56%), Gaps = 5/548 (0%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
+ LL+ C D R+ IH +I NG+ SN+ T V+ YAK V A K FDRMP
Sbjct: 178 FTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMP 237
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
ER++V W +ISGYAQNG+ + AL + M G R + T S L A A + L+ GR
Sbjct: 238 ERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRS 297
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF 212
I G + F + V +AL+D+Y+KCG + A ++F+R+ K VVSWN+MI G G
Sbjct: 298 IHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGD 357
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGLESSNKLT 270
+ +F+ MM + ++ T+ L A +G +E + +H L+ +L L S +
Sbjct: 358 PGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRF--VHKLLDQLELGSDVSVM 415
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
SLI +Y+K + A +++ ++ ++S A+I G+A++ EA D F M L+ +
Sbjct: 416 NSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQN-GRINEAIDYFCKMQLQNI 474
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
D + ++ A ++ L + IH + + V AL+DMYAK G + A +
Sbjct: 475 KPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARK 534
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
FD M +++V +W ++I GY HG G A+EL++KMK E + PN+VTFL +L ACSH+GL
Sbjct: 535 LFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGL 594
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
EG++ F M Y + P +H+ +VDL R +L A++ I++M I+P S++ A+L
Sbjct: 595 VEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAML 654
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
GAC I+ N LGE AA +FD++P+ +V+L+NIY A WD + R ME++ ++K
Sbjct: 655 GACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKKGIQK 714
Query: 571 NPGYSFLQ 578
PG+S ++
Sbjct: 715 TPGWSVVE 722
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/497 (26%), Positives = 262/497 (52%), Gaps = 12/497 (2%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
LL+ C K + H II NG S TK++ + K G + A + F + ++
Sbjct: 83 LLELCTSMK---ELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKI 139
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG 155
+ M+ GYA+N ++A+ F M GVR + ++ L+ C L+ G+ I
Sbjct: 140 DELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHC 199
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD 215
+ F N+F + ++++YAKC +E+A+ +F+R+ +D+V WN +I G A GF
Sbjct: 200 QLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKT 259
Query: 216 SFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKLTGSLI 274
+ L M +G +PD T+ SIL A V + ++I + IH ++ G ES ++ +L+
Sbjct: 260 ALELVLRMQEEGKRPDSITIVSILPA-VADVGSLRIGRSIHGYSMRAGFESFVNVSTALV 318
Query: 275 DVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD 334
D+Y+K GS+ +A ++ M ++S ++I G+ ++ + A ++F+ M+ +++ + +
Sbjct: 319 DMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGD-PGAAMEIFQKMMDEQVEMTN 377
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE 394
V + L+ CA++ + GR +H + + D +V N+LI MY+K + A F+
Sbjct: 378 VTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFEN 437
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG 454
+ K ++SW ++I GYA++G +EAI+ + KM+ + + P+ T +S++ A + + +
Sbjct: 438 LQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQA 497
Query: 455 WELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACS 514
+ ++ + + + +VD++A+ G + +A + M+ + + W+A++
Sbjct: 498 -KWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTT-WNAMIDG-- 553
Query: 515 IYGNTSLGELAARNLFD 531
YG LG+ AA LF+
Sbjct: 554 -YGTHGLGK-AALELFE 568
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 121/423 (28%), Positives = 219/423 (51%), Gaps = 13/423 (3%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS 83
PD++ T +S+L D + R IH + + G+ES +++ST ++ Y+K G V +
Sbjct: 274 PDSI----TIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGT 329
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
AR FDRM + VVSW +MI GY QNG A+ +F M+ V T AL ACA
Sbjct: 330 ARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACAD 389
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
+ ++ GR + + + ++ V ++L+ +Y+KC ++ A +FE ++ K +VSWNAM
Sbjct: 390 LGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAM 449
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGL 263
I G A G +++ F M Q +KPD FT+ S++ A L + IH L+I+ L
Sbjct: 450 ILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCL 509
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
+ + + +L+D+YAK G++ +A +L+ M + + + A+I G+ K A +LF+
Sbjct: 510 DKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYG-THGLGKAALELFE 568
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN--ALIDMYAK 381
M + + ++V +L+ C++ + G Q + K + A+ + A++D+ +
Sbjct: 569 KMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFG-SMKKDYGLEPAMDHYGAMVDLLGR 627
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE--GMVPNDVTFL 439
+ + +A +M + IS + G + H+ +EL +K + + P+D +
Sbjct: 628 ANRLNEAWDFIQKMPIEPAISVFGAMLGACR---IHKNVELGEKAANRIFDLDPDDGGYH 684
Query: 440 SLL 442
LL
Sbjct: 685 VLL 687
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 208/564 (36%), Positives = 313/564 (55%), Gaps = 9/564 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY S+L C + +H+ II + +E NL + ++ YAK G + AR+ F
Sbjct: 449 DEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQF 508
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ + R+ VSW A+I GY Q ++ A +F M+ G+ ++ + +S L CA ++ L+
Sbjct: 509 EFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALE 568
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G + + K L+ S+L+D+Y KCG IE A +F + + VVS NA+I G A
Sbjct: 569 QGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYA 628
Query: 209 MQGFND--DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
ND ++ LF+ M +G+ P T S+L A G +L QIH LI K GL
Sbjct: 629 Q---NDLVEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYD 685
Query: 267 NKLTG-SLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALISGFARDDNHSKEAFDLFKD 324
G SL+ +Y A L+ I TA+ISG ++ S+EA L+++
Sbjct: 686 GDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQN-GCSEEALQLYQE 744
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M D +L C+ +ASL GR IH+ F D G+A++DMYAK G+
Sbjct: 745 MHRNNARPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGD 804
Query: 385 IADANRAFDEMGDKN-VISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
+ + + F+EMG KN VISW S+I G+AK+GY A++++ +MKH + P+DVTFL +L
Sbjct: 805 MKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDDVTFLGVLT 864
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
ACSH G EG E+F M++ Y+I+PR +H +C++DL R G L+ A I ++N +P A
Sbjct: 865 ACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGFLKEAEEFIDKLNFEPNA 924
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
+W+ +LGAC I+G+ G AA L ++EPE S YV+LSNIY A+G WD R+ M
Sbjct: 925 MIWATLLGACRIHGDDIRGRRAAEKLIELEPENSSPYVLLSNIYAASGNWDEVNSVRRAM 984
Query: 564 EERSLRKNPGYSFLQSSKKNILLL 587
E+ LRK PG S++ +K L +
Sbjct: 985 REKGLRKLPGCSWIVVGQKTNLFV 1008
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 170/482 (35%), Positives = 266/482 (55%), Gaps = 5/482 (1%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
ST S+L +A L+HA I G SN+++ + +I YAK + +A+K FD
Sbjct: 350 STLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDA 409
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+ ERN+V W AM+ GYAQNGY + +FS M G ++FTY+S L ACA + L+ G
Sbjct: 410 LDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMG 469
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
R + I K F NLFV++ L+D+YAKCG +E+A FE I +D VSWNA+I G +
Sbjct: 470 RQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQE 529
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
D++F +FR M+ G+ PD +L SIL L + Q+H ++K GL++
Sbjct: 530 EDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAG 589
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
SLID+Y K G+I +A ++ M ++S A+I+G+A++D EA DLF++M + +
Sbjct: 590 SSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQND--LVEAIDLFQEMQNEGL 647
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA-VGNALIDMYAKSGEIADAN 389
++ +L+ C LNLGRQIH K YD +G +L+ MY S DA+
Sbjct: 648 NPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDAD 707
Query: 390 RAFDEMG-DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
F E K+ I WT++I+G+ ++G EA++LY++M P+ TF S+L ACS
Sbjct: 708 ILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSIL 767
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
+G + +I + S VVD++A+ G ++S+ + +M K W++
Sbjct: 768 ASLGDG-RMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNS 826
Query: 509 IL 510
++
Sbjct: 827 MI 828
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 132/470 (28%), Positives = 240/470 (51%), Gaps = 44/470 (9%)
Query: 44 KAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMI 103
+A R + IHA + G+ S L + ++ YAK G+V A KAF+++ +R++++W +++
Sbjct: 95 QASRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVL 154
Query: 104 SGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFV 163
S Y++ G E + F ++ GV NQFTY+ L +CAR+ + G+ + + K F
Sbjct: 155 SMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFE 214
Query: 164 ENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM 223
N F + +L+D+Y+KCG + DA +F+ + D VSW AMI G G +++ +F M
Sbjct: 215 FNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDM 274
Query: 224 MRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
+ G+ PD +++ A VG G +
Sbjct: 275 QKLGLVPDQVAFVTVITACVG-----------------------------------LGRL 299
Query: 284 RSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNI 343
A L+ M T++++ +ISG + EA D FK+M + L +L+
Sbjct: 300 DDACDLFVQMPNTNVVAWNVMISGHVK-RGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSA 358
Query: 344 CANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISW 403
A++ +LN G +HA A K + + VG++LI+MYAK ++ A + FD + ++N++ W
Sbjct: 359 IASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLW 418
Query: 404 TSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMIN 463
+++ GYA++GY + ++L+ +M+ G P++ T+ S+L AC+ G +L + +I
Sbjct: 419 NAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIK 478
Query: 464 ---KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
+Y + + +VD++A+ G LE A + + S W+AI+
Sbjct: 479 HNFEYNLFVE----NTLVDMYAKCGALEEARQQFEFIRNRDNVS-WNAII 523
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 187/533 (35%), Positives = 311/533 (58%), Gaps = 2/533 (0%)
Query: 46 ERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISG 105
ER L+HAH I +G SNL + + ++ Y K ARK FD MPER+ V W MISG
Sbjct: 129 ERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISG 188
Query: 106 YAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVEN 165
+++N Y E+++ VF ML G+ + T ++ L A A ++ + G IQ K +
Sbjct: 189 FSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSD 248
Query: 166 LFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR 225
++V + L+ LY+KCG ILF++I++ D++S+NAMI G + + LFR ++
Sbjct: 249 VYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLA 308
Query: 226 QGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRS 285
G + + TL ++ + L I +L +K+G+ ++ +L VY + ++
Sbjct: 309 SGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQF 368
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
A QL+ + + S A+ISG+ ++ + A LF++M + ++ + V + +L+ CA
Sbjct: 369 ARQLFDESPEKSLASWNAMISGYTQN-GLTDRAISLFQEM-MPQLSPNPVTVTSILSACA 426
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
+ +L++G+ +H + + V AL+DMYAK G I +A + FD M DKNV++W +
Sbjct: 427 QLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNA 486
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
+I GY HG+G EA++L+ +M G+ P VTFLS+L+ACSH+GL EG E+F M N Y
Sbjct: 487 MITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNY 546
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
P +EH++C+VD+ R GQL +A I +M ++P ++W A+LGAC I+ NT + +A
Sbjct: 547 GFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVA 606
Query: 526 ARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
++ LF ++PE YV+LSNIY+ + A R+++++R L K PG + ++
Sbjct: 607 SKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIE 659
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/484 (27%), Positives = 241/484 (49%), Gaps = 12/484 (2%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
I A +I +G +L TK+ + +G V R+ F+++ + ++ + +I G++ NG
Sbjct: 33 IQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGL 92
Query: 112 DENALLVFSAMLR-SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
++++ +++ + + + +R + FTY+ A+ A +R+ + G ++ NLFV S
Sbjct: 93 PKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGS 152
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
A++DLY K E A +F+ + +D V WN MI G + + +DS +F M+ G+
Sbjct: 153 AIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSF 212
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
D TL ++L A E I L K GL S + LI +Y+K G L+
Sbjct: 213 DSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILF 272
Query: 291 RSMLKTDIISCTALISGFARDDNHSKE-AFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ + D+IS A+ISG+ NH E A LF++++ ++ L ++ +
Sbjct: 273 DQIDQPDLISYNAMISGYTF--NHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNH 330
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
L L R I + K +V AL +Y + E+ A + FDE +K++ SW ++I+G
Sbjct: 331 LQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISG 390
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG-LTCEGWELFTDMINKYRIL 468
Y ++G AI L+++M + + PN VT S+L AC+ G L+ W +I R+
Sbjct: 391 YTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKW--VHGLIKSERLE 447
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARN 528
+ +VD++A+ G + A + M K + W+A++ ++G+ G+ A +
Sbjct: 448 SNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVT-WNAMITGYGLHGH---GKEALKL 503
Query: 529 LFDM 532
++M
Sbjct: 504 FYEM 507
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 94/185 (50%), Gaps = 2/185 (1%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS 83
P +P T S+L C A +H I + ESN+++ST ++ YAK G ++
Sbjct: 409 PQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVE 468
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
AR+ FD M ++NVV+W AMI+GY +G+ + AL +F ML+SG+ T+ S L AC+
Sbjct: 469 ARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSH 528
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSA-LLDLYAKCGWIEDAWILFERIE-RKDVVSWN 201
+ G I S+ + + A ++D+ + G + +A ER+ W
Sbjct: 529 SGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWG 588
Query: 202 AMIGG 206
A++G
Sbjct: 589 ALLGA 593
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 187/533 (35%), Positives = 311/533 (58%), Gaps = 2/533 (0%)
Query: 46 ERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISG 105
ER L+HAH I +G SNL + + ++ Y K ARK FD MPER+ V W MISG
Sbjct: 129 ERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISG 188
Query: 106 YAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVEN 165
+++N Y E+++ VF ML G+ + T ++ L A A ++ + G IQ K +
Sbjct: 189 FSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSD 248
Query: 166 LFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR 225
++V + L+ LY+KCG ILF++I++ D++S+NAMI G + + LFR ++
Sbjct: 249 VYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLA 308
Query: 226 QGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRS 285
G + + TL ++ + L I +L +K+G+ ++ +L VY + ++
Sbjct: 309 SGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQF 368
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
A QL+ + + S A+ISG+ ++ + A LF++M + ++ + V + +L+ CA
Sbjct: 369 ARQLFDESPEKSLASWNAMISGYTQN-GLTDRAISLFQEM-MPQLSPNPVTVTSILSACA 426
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
+ +L++G+ +H + + V AL+DMYAK G I +A + FD M DKNV++W +
Sbjct: 427 QLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNA 486
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
+I GY HG+G EA++L+ +M G+ P VTFLS+L+ACSH+GL EG E+F M N Y
Sbjct: 487 MITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNY 546
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
P +EH++C+VD+ R GQL +A I +M ++P ++W A+LGAC I+ NT + +A
Sbjct: 547 GFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVA 606
Query: 526 ARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
++ LF ++PE YV+LSNIY+ + A R+++++R L K PG + ++
Sbjct: 607 SKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIE 659
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/484 (27%), Positives = 241/484 (49%), Gaps = 12/484 (2%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
I A +I +G +L TK+ + +G V R+ F+++ + ++ + +I G++ NG
Sbjct: 33 IQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGL 92
Query: 112 DENALLVFSAMLR-SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
++++ +++ + + + +R + FTY+ A+ A +R+ + G ++ NLFV S
Sbjct: 93 PKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGS 152
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
A++DLY K E A +F+ + +D V WN MI G + + +DS +F M+ G+
Sbjct: 153 AIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSF 212
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
D TL ++L A E I L K GL S + LI +Y+K G L+
Sbjct: 213 DSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILF 272
Query: 291 RSMLKTDIISCTALISGFARDDNHSKE-AFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ + D+IS A+ISG+ NH E A LF++++ ++ L ++ +
Sbjct: 273 DQIDQPDLISYNAMISGYTF--NHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNH 330
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
L L R I + K +V AL +Y + E+ A + FDE +K++ SW ++I+G
Sbjct: 331 LQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISG 390
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG-LTCEGWELFTDMINKYRIL 468
Y ++G AI L+++M + + PN VT S+L AC+ G L+ W +I R+
Sbjct: 391 YTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKW--VHGLIKSERLE 447
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARN 528
+ +VD++A+ G + A + M K + W+A++ ++G+ G+ A +
Sbjct: 448 SNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVT-WNAMITGYGLHGH---GKEALKL 503
Query: 529 LFDM 532
++M
Sbjct: 504 FYEM 507
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 94/185 (50%), Gaps = 2/185 (1%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS 83
P +P T S+L C A +H I + ESN+++ST ++ YAK G ++
Sbjct: 409 PQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVE 468
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
AR+ FD M ++NVV+W AMI+GY +G+ + AL +F ML+SG+ T+ S L AC+
Sbjct: 469 ARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSH 528
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSA-LLDLYAKCGWIEDAWILFERIE-RKDVVSWN 201
+ G I S+ + + A ++D+ + G + +A ER+ W
Sbjct: 529 SGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWG 588
Query: 202 AMIGG 206
A++G
Sbjct: 589 ALLGA 593
>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 195/564 (34%), Positives = 307/564 (54%), Gaps = 13/564 (2%)
Query: 24 PDTLLDPSTYMSLLQFCI---DKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGD 80
PD L T+ S+++ C D RQ +HAH+I + + +L +I Y G
Sbjct: 258 PDQL----TFGSVIKACYIAGDIDLGRQ---LHAHVIKSWFGHHLTSQNALISMYTNFGQ 310
Query: 81 VLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV-RANQFTYSSALR 139
+ A F R+P ++++SW MI+GY Q GY AL +F +LR G + N+F + S
Sbjct: 311 IEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFS 370
Query: 140 ACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS 199
AC+ + L+ G+ + G K N+F +L D+YAK G++ A + F +I+ D+VS
Sbjct: 371 ACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVS 430
Query: 200 WNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLII 259
WNA+I A G +++ FR M+ G+ PD T S+L + L + QIH I+
Sbjct: 431 WNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIV 490
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT-DIISCTALISGFARDDNHSKEA 318
K+G + + SL+ +Y K + A ++R + + +++S A++S + E
Sbjct: 491 KIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEG-ET 549
Query: 319 FDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDM 378
F L+K+M D + + +L CA + SL +G Q+H ++ K D +V N LIDM
Sbjct: 550 FRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDM 609
Query: 379 YAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTF 438
YAK G + A FD + +++SW+SLI GYA+ G GHEA+ L++ M + G+ PN+VT+
Sbjct: 610 YAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTY 669
Query: 439 LSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMN 498
L L ACSH GL EGW L+ M ++ I P EHFSC+VDL AR G L A I++
Sbjct: 670 LGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSG 729
Query: 499 IKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARK 558
+ + W +L AC + N + E A N+ ++P S V+L NI+ +AG W+ K
Sbjct: 730 LDADITAWKTLLAACKTHNNVDIAERGAGNILKLDPSNSAAMVMLCNIHASAGNWEEVAK 789
Query: 559 TRKLMEERSLRKNPGYSFLQSSKK 582
RKLM++ ++K PG S+++ K
Sbjct: 790 LRKLMKQMGVQKVPGQSWIEVKDK 813
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 168/518 (32%), Positives = 269/518 (51%), Gaps = 9/518 (1%)
Query: 15 QALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIF 74
+A F L ++ +PSTY SL+ C + ++ A IH H++ + Y+ ++ L +I
Sbjct: 144 EAFDFHLKNSNSHFEPSTYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINM 203
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
Y K G + ARK FD M NVVSWT+MISGY+QNG +A++++ M RSG +Q T+
Sbjct: 204 YGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTF 263
Query: 135 SSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER 194
S ++AC + GR + + K F +L ++AL+ +Y G IE A +F RI
Sbjct: 264 GSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPT 323
Query: 195 KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGM-KPDCFTLGSILRASVGGIELMKISQ 253
KD++SW MI G G+ ++ +LFR ++RQG +P+ F GS+ A +EL Q
Sbjct: 324 KDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQ 383
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN 313
+H + +K GL + SL D+YAK+G + SA + + DI+S A+I+ FA D+
Sbjct: 384 VHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFA-DNG 442
Query: 314 HSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN 373
+ EA D F+ MI + D + +L C + LN GRQIH++ K + V N
Sbjct: 443 DANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCN 502
Query: 374 ALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
+L+ MY K + DA F ++ + N++SW ++++ + E LYK+M G
Sbjct: 503 SLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNK 562
Query: 433 PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYN 492
P+ +T +LL C+ G ++ I IL + + ++D++A+ G L+ A +
Sbjct: 563 PDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSV-CNGLIDMYAKCGSLKHARD 621
Query: 493 MIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
+ S S I+G Y LG A NLF
Sbjct: 622 VFDSTQNLDIVSWSSLIVG----YAQCGLGH-EALNLF 654
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 200/576 (34%), Positives = 316/576 (54%), Gaps = 4/576 (0%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K G L++ + + C D T +L+ + ++H + G+ S
Sbjct: 173 KAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCA 232
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ ++ FYAK A FD MP R+V+SW +MISG NG + A+ +F M G
Sbjct: 233 VGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEG 292
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
+ T S L ACA + L GR++ G K F+ + + LLD+Y+ C
Sbjct: 293 EELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTN 352
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+F + +K+VVSW AMI G D LF+ M +G +PD F + S L A G
Sbjct: 353 KIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNE 412
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
L +H I+ G+E +T +L+++Y K G++ A ++ ++ D+IS LI
Sbjct: 413 LLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIG 472
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
G++R+ N + EAF LF +M+L+ + + V + +L A+++SL GR++HA+A +
Sbjct: 473 GYSRN-NLANEAFSLFTEMLLQ-LRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYL 530
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
D V NALIDMY K G + A R FD + +KN+ISWT ++AGY HG G +AI L+++M
Sbjct: 531 EDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQM 590
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
+ G+ P+ +F ++L+ACSH+GL EGW F M +++I PR +H++C+VDL G
Sbjct: 591 RVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGN 650
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
L+ AY I M I+P +S+W ++L C I+ N L E A +F++EPE + YV+L+NI
Sbjct: 651 LKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAERVFELEPENTGYYVLLANI 710
Query: 547 YTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
Y A W+ RK + + R LR+N G S++++ K
Sbjct: 711 YAEAERWEAVRKLKNKIGGRGLRENTGCSWIEAKGK 746
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 163/547 (29%), Positives = 272/547 (49%), Gaps = 44/547 (8%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKA---ERQAH-LIHAHIITNGYESN 64
++G L++AL S +D +Y ++LQ C + ++ ++AH L+ A + N
Sbjct: 73 RSGDLEEALGLLGS---DGVDDRSYGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDN 129
Query: 65 LHLSTKVIIFYAKVGDVLSARKAFDRMPE-RNVVSWTAMISGYAQNGYDENALLVFSAML 123
+ L K+++ Y K GD+ +AR+ FD MP+ +V WTA++SGYA+ G +L+F M
Sbjct: 130 V-LGQKLVLMYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMH 188
Query: 124 RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIE 183
GVR + +T S L+ A + ++ G ++ G ++K F V +AL+ YAK +
Sbjct: 189 CCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTK 248
Query: 184 DAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV 243
DA ++F+ + +DV+SWN+MI G G D + LF M +G + D TL S+L A
Sbjct: 249 DAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACA 308
Query: 244 GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTA 303
L +H +K G S L L+D+Y+ RS +++R+M++ +++S TA
Sbjct: 309 ELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTA 368
Query: 304 LISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY 363
+I+ + R + K A LF++M L+ D + L+ A L G+ +H +A +
Sbjct: 369 MITSYTRAGLYDKVA-GLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRN 427
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELY 423
AV NAL++MY K G + +A FD + K++ISW +LI GY+++ +EA L+
Sbjct: 428 GMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLF 487
Query: 424 KKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWEL------------------FTDMINK- 464
+M + + PN VT +L A + G E+ DM K
Sbjct: 488 TEMLLQ-LRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKC 546
Query: 465 ------YRILPRAEH-----FSCVVDLFARRGQLESAYNMIRQM---NIKPTASLWSAIL 510
R+ R + ++ +V + G+ A + QM I P A+ +SAIL
Sbjct: 547 GALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAIL 606
Query: 511 GACSIYG 517
ACS G
Sbjct: 607 YACSHSG 613
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 187/546 (34%), Positives = 312/546 (57%), Gaps = 1/546 (0%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y S + C A +HAH I N + S+ + T ++ YAK G+++ AR+AF +P
Sbjct: 255 YASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLP 314
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
NV + AM+ G + G A+ +F M RSGV + + S ACA ++ G
Sbjct: 315 HHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQ 374
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF 212
+ K F ++ V++A+LDLY KC + +A+++F+ +E++D VSWNA+I L
Sbjct: 375 VHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNEC 434
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS 272
+D+ M+R GM+PD FT GS+L+A G L +H IK GL ++ +
Sbjct: 435 YEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSST 494
Query: 273 LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI 332
++D+Y K G+I A +L+ + +++S ++ISGF+ S+EA F +M+ +
Sbjct: 495 VVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLT-KQSEEAQRFFSEMLDMGVKP 553
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAF 392
D +L+ CAN+A++ LG+QIH K + D + + L+DMYAK G + D+ F
Sbjct: 554 DHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMF 613
Query: 393 DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTC 452
++ + +SW ++I GYA HG G EA+E++++M+ +VPN TF+++L ACSH GL
Sbjct: 614 EKARKLDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLD 673
Query: 453 EGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
+G + F M ++Y+++P+ EHF+C+VD+ R + A IR M I+ A +W +L
Sbjct: 674 DGCQYFHLMTSRYKLVPQLEHFACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLLSI 733
Query: 513 CSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNP 572
C I + + E AA N+ ++P+ + Y++LSN+Y +G W + +TR+LM + LRK P
Sbjct: 734 CKIRQDVEVAETAASNVLRLDPDDASVYILLSNVYAGSGKWVDVSRTRRLMRQGRLRKEP 793
Query: 573 GYSFLQ 578
G S+++
Sbjct: 794 GCSWIE 799
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 140/513 (27%), Positives = 235/513 (45%), Gaps = 25/513 (4%)
Query: 30 PSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLST----KVIIFYAKVGDVLSAR 85
P+T++S C+ + R HAH + +++ H T ++ Y GD +A
Sbjct: 52 PTTFVS---NCLLQMYARCGGTAHAHGV---FDTMPHRDTVSWNTMLTAYVHAGDTDTAA 105
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
F MP+ +VVSW +ISGY Q+G N++ + M R GV ++ T + L++C +
Sbjct: 106 SLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLD 165
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
L G I K ++ SAL+D+Y KC ++DA F + ++ VSW A I
Sbjct: 166 DLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIA 225
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
G LF M R G+ S R+ L Q+H IK + S
Sbjct: 226 GCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIK-NVFS 284
Query: 266 SNKLTGS-LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
S+++ G+ ++DVYAK G++ A + + + ++ +C A++ G R EA LF+
Sbjct: 285 SDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVR-TGLGAEAMQLFQF 343
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M +G D + L + + CA V G Q+H A K D V NA++D+Y K
Sbjct: 344 MTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKA 403
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ +A F EM ++ +SW ++IA ++ + I +M GM P+D T+ S+L A
Sbjct: 404 LVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKA 463
Query: 445 CS-----HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
C+ GL G + K + A S VVD++ + G + A + ++
Sbjct: 464 CAGLQSLEYGLVVHGKAI------KSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGG 517
Query: 500 KPTASLWSAILGACSIYGNTSLGELAARNLFDM 532
+ S W++I+ S+ + + + DM
Sbjct: 518 QELVS-WNSIISGFSLTKQSEEAQRFFSEMLDM 549
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 197/422 (46%), Gaps = 44/422 (10%)
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
V F++ L A A L G+ + F+ FV + LL +YA+CG A
Sbjct: 15 VATATFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAH 74
Query: 187 ILFERIERKDVVSWNAM-------------------------------IGGLAMQGFNDD 215
+F+ + +D VSWN M I G G +
Sbjct: 75 GVFDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRN 134
Query: 216 SFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLGLESSNKLTGSLI 274
S L M R+G+ D TL +L+ S GG++ + + QIH L +K GLE+ + +L+
Sbjct: 135 SVGLSMEMSRRGVALDRTTLAVLLK-SCGGLDDLALGVQIHALAVKTGLETDVRAGSALV 193
Query: 275 DVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD 334
D+Y K S+ A + + M + + +S A I+G +++ +++ +LF M +G+
Sbjct: 194 DMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTR-GMELFVQMQRLGLGVSQ 252
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE 394
CA + L+ RQ+HA A K S D VG A++D+YAK+G + DA RAF
Sbjct: 253 PAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIG 312
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF-ACSHTGLTCE 453
+ NV + +++ G + G G EA++L++ M G V DV LS +F AC+ +
Sbjct: 313 LPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSG-VGFDVISLSGVFSACAEVKGYFQ 371
Query: 454 GWELFTDMINK---YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
G ++ + + R + ++DL+ + L AY + ++M + + S W+AI+
Sbjct: 372 GLQVHCLAVKSGFDVDVCVR----NAILDLYGKCKALVEAYLVFQEMEQRDSVS-WNAII 426
Query: 511 GA 512
A
Sbjct: 427 AA 428
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 147/280 (52%), Gaps = 2/280 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY S+L+ C ++ ++H I +G + +S+ V+ Y K G + A+K
Sbjct: 453 DDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLH 512
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
DR+ + +VSW ++ISG++ E A FS ML GV+ + FTY++ L CA + ++
Sbjct: 513 DRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIE 572
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ I G I K + + ++ S L+D+YAKCG + D+ ++FE+ + D VSWNAMI G A
Sbjct: 573 LGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSWNAMICGYA 632
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSN 267
+ G ++ +F M R + P+ T ++LRA S G+ H + + L
Sbjct: 633 LHGQGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQYFHLMTSRYKLVPQL 692
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALIS 306
+ ++D+ + + A + RSM ++ D + L+S
Sbjct: 693 EHFACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLLS 732
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 185/528 (35%), Positives = 300/528 (56%), Gaps = 1/528 (0%)
Query: 51 LIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
L+H + + G +++ + + ++ Y K G + R+ F MP RNVVSWTA+I+G + G
Sbjct: 137 LLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAG 196
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
Y++ AL+ FS M RS V + +T++ AL+ACA L GR I K F + FV +
Sbjct: 197 YNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVAN 256
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
L +Y KCG +E LFE++ +DVVSW +I L G + + F M + P
Sbjct: 257 TLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSP 316
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
+ +T +++ + Q+H LI+ LGL +S + S++ +YAK G + S+ ++
Sbjct: 317 NEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIF 376
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
M + DI+S + +I+G+++ H EAF+L M ++ + L +L+ C N+A L
Sbjct: 377 HEMTRRDIVSWSTIIAGYSQG-GHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAIL 435
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
G+Q+HA+ + A V +ALI+MY K G I +A+R FD + +++SWT++I GY
Sbjct: 436 EHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGY 495
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
A+HGY E I+L++K+ G+ P+ VTF+ +L ACSH GL G+ F M KY+I P
Sbjct: 496 AEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPS 555
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
EH+ C++DL R G+L A +MI M +WS +L AC ++G+ G A +
Sbjct: 556 KEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERIL 615
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+EP + ++ L+NIY + G W A RKLM+ + + K PG+S+++
Sbjct: 616 QLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIK 663
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 139/495 (28%), Positives = 244/495 (49%), Gaps = 35/495 (7%)
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSA 121
+++L S K + K G + +AR+ FD+M +++ +SWT +ISGY ALL+F
Sbjct: 46 QTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKN 105
Query: 122 M-LRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M + SG+R + F S A +AC + G ++ G K V ++FV SALLD+Y K G
Sbjct: 106 MRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNG 165
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
I + +F + ++VVSW A+I GL G+N ++ F M R ++ D +T L+
Sbjct: 166 KIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALK 225
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
A L +IH +K G + S+ + +L +Y K G + L+ M D++S
Sbjct: 226 ACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVS 285
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
T +I+ + + A F M + ++ +++ CAN+A + G Q+HA
Sbjct: 286 WTTIITTLVQ-MGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALI 344
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
+ +V N+++ MYAK G++ ++ F EM ++++SW+++IAGY++ G+ EA
Sbjct: 345 LHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAF 404
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWEL---------------FTDMINKY 465
EL M+ EG P + S+L AC + + G +L + +IN Y
Sbjct: 405 ELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMY 464
Query: 466 ----------RILPRAEH-----FSCVVDLFARRG---QLESAYNMIRQMNIKPTASLWS 507
RI AE+ ++ +++ +A G ++ + I ++ ++P + +
Sbjct: 465 CKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFI 524
Query: 508 AILGACSIYGNTSLG 522
+L ACS G LG
Sbjct: 525 GVLSACSHAGLVDLG 539
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 204/388 (52%), Gaps = 3/388 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ L+ C D A IHA + G++ + ++ + Y K G + F
Sbjct: 216 DSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLF 275
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
++M R+VVSWT +I+ Q G +E A+ F M S V N++T+++ + CA + ++
Sbjct: 276 EKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIE 335
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G + I +L V+++++ +YAKCG + + ++F + R+D+VSW+ +I G +
Sbjct: 336 WGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYS 395
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G ++F L M +G KP F L S+L A L Q+H ++ +GLE +
Sbjct: 396 QGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAM 455
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +LI++Y K GSI A +++ + DI+S TA+I+G+A + +S+E DLF+ +
Sbjct: 456 VLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYA-EHGYSREVIDLFEKIPRV 514
Query: 329 KMGIDDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ D V +L+ C++ ++LG R +A + KYQ S +ID+ ++G ++D
Sbjct: 515 GLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSD 574
Query: 388 ANRAFDEMG-DKNVISWTSLIAGYAKHG 414
A + M ++ + W++L+ HG
Sbjct: 575 AEHMIEAMPFHRDDVVWSTLLRACRVHG 602
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 134/262 (51%), Gaps = 10/262 (3%)
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR 310
+SQ I + L SNK L+ K G + +A +++ M + D IS T LISG+
Sbjct: 37 LSQNIHFISQTDLPESNKQLKELV----KTGHLGNARRMFDKMSQKDEISWTTLISGYV- 91
Query: 311 DDNHSKEAFDLFKDMILKK-MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDA 369
+ N S EA LFK+M ++ + ID IL L C + +N G +H +A K
Sbjct: 92 NANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSV 151
Query: 370 AVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE 429
VG+AL+DMY K+G+I + R F EM +NV+SWT++I G + GY EA+ + +M
Sbjct: 152 FVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRS 211
Query: 430 GMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK-YRILPRAEHFSCVVDLFARRGQLE 488
+ + TF L AC+ +G G E+ + K + + + + ++ + G+LE
Sbjct: 212 RVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVAN--TLATMYNKCGKLE 269
Query: 489 SAYNMIRQMNIKPTASLWSAIL 510
+ +M+++ S W+ I+
Sbjct: 270 YGLTLFEKMSMRDVVS-WTTII 290
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 203/575 (35%), Positives = 317/575 (55%), Gaps = 9/575 (1%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPSTY--MSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K+ L AL F + P Y LL+ C D ++ IH +IT+G+ NL
Sbjct: 7 KSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSGFSWNLF 66
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
T V+ YAK + A FDRMPER++V W MISGYAQNG+ + AL++ M G
Sbjct: 67 AMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEG 126
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
R + T S L A A R L+ G + G + + F + V +AL+D+Y+KCG + A
Sbjct: 127 HRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIAR 186
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
++F+ ++ + VVSWN+MI G G + + +F+ M+ +G++P T+ L A
Sbjct: 187 VIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLG 246
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
+L + +H L+ +L L+S + SLI +Y+K + A +++++ ++S A+I
Sbjct: 247 DLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMIL 306
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQ---IHAFAFKY 363
G+A++ EA + F +M + + D M+++ +A L++ RQ IH +
Sbjct: 307 GYAQN-GCVNEALNAFCEMQSRNIKPDSFT---MVSVIPALAELSIPRQAKWIHGLVIRR 362
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELY 423
+ V AL+DMYAK G I A + FD M ++VI+W ++I GY HG G ++EL+
Sbjct: 363 FLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELF 422
Query: 424 KKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFAR 483
K+MK + PND+TFL L ACSH+GL EG F M Y I P +H+ +VDL R
Sbjct: 423 KEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGR 482
Query: 484 RGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVL 543
G+L A++ I++M IKP +++ A+LGAC I+ N LGE AA +F + P+ +V+L
Sbjct: 483 AGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLL 542
Query: 544 SNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+NIY A W K R +ME+ L+K PG S ++
Sbjct: 543 ANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVE 577
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 231/433 (53%), Gaps = 8/433 (1%)
Query: 102 MISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGR 161
M+ GYA++ ++AL FS M VR + ++ L+ C L+ G+ I GS+
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 162 FVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFR 221
F NLF + ++++YAKC I DA+ +F+R+ +D+V WN MI G A GF + L
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 222 SMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKLTGSLIDVYAKY 280
M +G +PD T+ SIL A V L++I +H +++ G ES ++ +L+D+Y+K
Sbjct: 121 RMSEEGHRPDSITIVSILPA-VADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKC 179
Query: 281 GSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLM 340
GS+ A ++ M ++S ++I G+ + + ++ A +F+ M+ + + +V +
Sbjct: 180 GSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGD-AEGAMLIFQKMLDEGVQPTNVTVMGA 238
Query: 341 LNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNV 400
L+ CA++ L G+ +H + + D +V N+LI MY+K + A F + +K +
Sbjct: 239 LHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTL 298
Query: 401 ISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTD 460
+SW ++I GYA++G +EA+ + +M+ + P+ T +S++ A + + + +
Sbjct: 299 VSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGL 358
Query: 461 MINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTS 520
+I ++ + + +VD++A+ G + +A + MN + + W+A++ YG
Sbjct: 359 VIRRF-LDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVIT-WNAMIDG---YGTHG 413
Query: 521 LGELAARNLFDME 533
LG+ + +M+
Sbjct: 414 LGKTSVELFKEMK 426
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 363 bits (933), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 185/528 (35%), Positives = 299/528 (56%), Gaps = 1/528 (0%)
Query: 51 LIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
L+H + + G +++ + + ++ Y K G + R+ F MP RNVVSWTA+I+G + G
Sbjct: 137 LLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAG 196
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
Y++ AL+ FS M RS V + +T++ AL+ACA L GR I K F + FV +
Sbjct: 197 YNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVAN 256
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
L +Y KCG +E LFE++ +DVVSW +I L G + + F M + P
Sbjct: 257 TLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSP 316
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
+ +T +++ + Q+H LI+ LGL +S + S++ +YAK G + S+ ++
Sbjct: 317 NEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIF 376
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
M + DI+S + +I+G+ + H EAF+L M ++ + L +L+ C N+A L
Sbjct: 377 HEMTRRDIVSWSTIIAGYXQG-GHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAIL 435
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
G+Q+HA+ + A V +ALI+MY K G I +A+R FD + +++SWT++I GY
Sbjct: 436 EHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGY 495
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
A+HGY E I+L++K+ G+ P+ VTF+ +L ACSH GL G+ F M KY+I P
Sbjct: 496 AEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPS 555
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
EH+ C++DL R G+L A +MI M +WS +L AC ++G+ G A +
Sbjct: 556 KEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERIL 615
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+EP + ++ L+NIY + G W A RKLM+ + + K PG+S+++
Sbjct: 616 QLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIK 663
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 139/495 (28%), Positives = 243/495 (49%), Gaps = 35/495 (7%)
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSA 121
+++L S K + K G + +AR+ FD+M +++ +SWT +ISGY ALL+F
Sbjct: 46 QTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKN 105
Query: 122 M-LRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M + SG+R + F S A +AC + G ++ G K V ++FV SALLD+Y K G
Sbjct: 106 MRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNG 165
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
I + +F + ++VVSW A+I GL G+N ++ F M R ++ D +T L+
Sbjct: 166 KIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALK 225
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
A L +IH +K G + S+ + +L +Y K G + L+ M D++S
Sbjct: 226 ACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVS 285
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
T +I+ + + A F M + ++ +++ CAN+A + G Q+HA
Sbjct: 286 WTTIITTLVQ-MGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALI 344
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
+ +V N+++ MYAK G++ ++ F EM ++++SW+++IAGY + G+ EA
Sbjct: 345 LHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAF 404
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWEL---------------FTDMINKY 465
EL M+ EG P + S+L AC + + G +L + +IN Y
Sbjct: 405 ELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMY 464
Query: 466 ----------RILPRAEH-----FSCVVDLFARRG---QLESAYNMIRQMNIKPTASLWS 507
RI AE+ ++ +++ +A G ++ + I ++ ++P + +
Sbjct: 465 CKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFI 524
Query: 508 AILGACSIYGNTSLG 522
+L ACS G LG
Sbjct: 525 GVLSACSHAGLVDLG 539
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 202/388 (52%), Gaps = 3/388 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ L+ C D A IHA + G++ + ++ + Y K G + F
Sbjct: 216 DSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLF 275
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
++M R+VVSWT +I+ Q G +E A+ F M S V N++T+++ + CA + ++
Sbjct: 276 EKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIE 335
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G + I +L V+++++ +YAKCG + + ++F + R+D+VSW+ +I G
Sbjct: 336 WGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYX 395
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G ++F L M +G KP F L S+L A L Q+H ++ +GLE +
Sbjct: 396 QGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAM 455
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +LI++Y K GSI A +++ + DI+S TA+I+G+A + +S+E DLF+ +
Sbjct: 456 VLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYA-EHGYSREVIDLFEKIPRV 514
Query: 329 KMGIDDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ D V +L+ C++ ++LG +A + KYQ S +ID+ ++G ++D
Sbjct: 515 GLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSD 574
Query: 388 ANRAFDEMG-DKNVISWTSLIAGYAKHG 414
A + M ++ + W++L+ HG
Sbjct: 575 AEHMIEAMPFHRDDVVWSTLLRACRVHG 602
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 134/262 (51%), Gaps = 10/262 (3%)
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR 310
+SQ I + L SNK L+ K G + +A +++ M + D IS T LISG+
Sbjct: 37 LSQNIHFISQTDLPESNKQLKELV----KTGHLGNARRMFDKMSQKDEISWTTLISGYV- 91
Query: 311 DDNHSKEAFDLFKDMILKK-MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDA 369
+ N S EA LFK+M ++ + ID IL L C + +N G +H +A K
Sbjct: 92 NANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSV 151
Query: 370 AVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE 429
VG+AL+DMY K+G+I + R F EM +NV+SWT++I G + GY EA+ + +M
Sbjct: 152 FVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRS 211
Query: 430 GMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK-YRILPRAEHFSCVVDLFARRGQLE 488
+ + TF L AC+ +G G E+ + K + + + + ++ + G+LE
Sbjct: 212 RVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVA--NTLATMYNKCGKLE 269
Query: 489 SAYNMIRQMNIKPTASLWSAIL 510
+ +M+++ S W+ I+
Sbjct: 270 YGLTLFEKMSMRDVVS-WTTII 290
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 188/554 (33%), Positives = 325/554 (58%), Gaps = 5/554 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L+P + ++L+ + + A+ +HA I G+ESN + T +I YA G V SAR+A
Sbjct: 39 LNPFVFTTILKLLVSVECAELAYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQA 98
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD + +++VSWT M++ YA+N +++L +F+ M G N FT++ L+AC +
Sbjct: 99 FDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAF 158
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ + G + K + +L+V LLDLY K G D +FE + + DV+ W+ MI
Sbjct: 159 SVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRY 218
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLES 265
A + ++ LF M R + P+ FT S+L+ AS+ ++L K Q+H ++K+GL+
Sbjct: 219 AQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGK--QVHCHVLKVGLDG 276
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ ++ +L+DVYAK G + ++ +L+ + + ++ +I G+ + + K A L+K+M
Sbjct: 277 NVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDK-ALSLYKNM 335
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ ++ +V +L CA++A++ LG QIH+ + K D VGNALIDMYAK G I
Sbjct: 336 LECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSI 395
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
+A FD + +++ ISW ++I+GY+ HG EA++ ++ M+ VPN +TF+S+L AC
Sbjct: 396 KNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSAC 455
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
S+ GL G F M+ Y I P EH++C+V L R G L+ A +I ++ ++P +
Sbjct: 456 SNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKV 515
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
W A+LGAC I+ + LG ++A+ + ++P+ +V+LSNIY W++ RK M+
Sbjct: 516 WRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKN 575
Query: 566 RSLRKNPGYSFLQS 579
+ ++K PG S++++
Sbjct: 576 KGVKKEPGLSWIEN 589
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 141/518 (27%), Positives = 245/518 (47%), Gaps = 43/518 (8%)
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
MP+RN VS+ +I GY Q+ + + +FS + R G N F +++ L+ + +
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ I K N FV +AL+D YA CG + A F+ I KD+VSW M+ A
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKL 269
DS LF M G P+ FT +L+A + G+E + + +H ++K E +
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACI-GLEAFSVGKSVHGCVLKTCYEMDLYV 179
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
L+D+Y K+G +++ M K D+I + +IS +A+ N S+EA +LF M
Sbjct: 180 GVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQ-SNQSREAVELFGQMRRAF 238
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ + +L CA++ +L LG+Q+H K + V NAL+D+YAK G + ++
Sbjct: 239 VLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSM 298
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
+ F E+ ++N ++W ++I GY + G G +A+ LYK M + ++VT+ S+L AC+
Sbjct: 299 KLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLA 358
Query: 450 LTCEGWELFT---------------DMINKYRILPRAEHFSCVVDLFARR---------- 484
G ++ + +I+ Y ++ V D+ + R
Sbjct: 359 AMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMIS 418
Query: 485 --------GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL---FDME 533
G+ A+ M+++ P + +IL ACS G +G+ +++ + +E
Sbjct: 419 GYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIE 478
Query: 534 PEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKN 571
P +Y + + +G D K KL+EE L N
Sbjct: 479 PCME-HYTCMVWLLGRSGHLD---KAVKLIEEIPLEPN 512
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 186/547 (34%), Positives = 309/547 (56%), Gaps = 1/547 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
+Y S + C +HAH I N + S+ + T ++ YAK + AR+AF +
Sbjct: 252 SYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGL 311
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P V + AM+ G + G A+ +F M+RS +R + + S ACA + G+
Sbjct: 312 PNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQ 371
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ K F ++ V +A+LDLY KC + +A+++F+ +++KD VSWNA+I L G
Sbjct: 372 QVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNG 431
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
DD+ F M+R GMKPD FT GS+L+A L +HD +IK GL S +
Sbjct: 432 HYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVAS 491
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
+++D+Y K G I A +L+ + ++S A++SGF+ + S+EA F +M+ +
Sbjct: 492 TVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLN-KESEEAQKFFSEMLDMGLK 550
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
D +L+ CAN+A++ LG+QIH K + D + + L+DMYAK G++ D+
Sbjct: 551 PDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLV 610
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLT 451
F+++ ++ +SW ++I GYA HG G EA+ ++++M+ E +VPN TF+++L ACSH GL
Sbjct: 611 FEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLF 670
Query: 452 CEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
+G F M Y++ P+ EHF+C+VD+ R + A I M + A +W +L
Sbjct: 671 DDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 730
Query: 512 ACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKN 571
C I + + ELAA N+ ++P+ S Y++LSN+Y +G W + +TR+L+++ L+K
Sbjct: 731 ICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKE 790
Query: 572 PGYSFLQ 578
PG S+++
Sbjct: 791 PGCSWIE 797
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 147/539 (27%), Positives = 261/539 (48%), Gaps = 10/539 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D +T+ LL+ C + +HA + G E ++ + ++ Y K + A F
Sbjct: 148 DRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFF 207
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
MPERN VSW A I+G QN L +F M R G+ +Q +Y+SA R+CA M L
Sbjct: 208 YGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLN 267
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
GR + K +F + V +A++D+YAK + DA F + V + NAM+ GL
Sbjct: 268 TGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLV 327
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G ++ LF+ M+R ++ D +L + A + Q+H L IK G +
Sbjct: 328 RAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDIC 387
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +++D+Y K ++ AY +++ M + D +S A+I+ + + H + F +M+
Sbjct: 388 VNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQ-NGHYDDTILHFNEMLRF 446
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
M DD +L CA + SL G +H K DA V + ++DMY K G I +A
Sbjct: 447 GMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEA 506
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ D +G + V+SW ++++G++ + EA + + +M G+ P+ TF ++L C++
Sbjct: 507 QKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANL 566
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
G ++ +I K +L S +VD++A+ G + + + ++ + S W+A
Sbjct: 567 ATIELGKQIHGQII-KQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVS-WNA 624
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSV----NYVVLSNIYTAAGAWDNARKTRKLM 563
++ +++G LG A R M+ E V +V + + G +D+ + LM
Sbjct: 625 MICGYALHG---LGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLM 680
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 217/458 (47%), Gaps = 3/458 (0%)
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
Y+ GD+ +A FD MP+ +VVSW A++SGY Q G + ++ +F M R GV ++ T+
Sbjct: 93 YSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTF 152
Query: 135 SSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER 194
+ L++C+ + L G + K ++ SAL+D+Y KC ++DA F +
Sbjct: 153 AVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPE 212
Query: 195 KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQI 254
++ VSW A I G LF M R G+ + S R+ L Q+
Sbjct: 213 RNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQL 272
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH 314
H IK S + +++DVYAK S+ A + + + + + A++ G R
Sbjct: 273 HAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVR-AGL 331
Query: 315 SKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNA 374
EA LF+ MI + D V L + + CA G+Q+H A K D V NA
Sbjct: 332 GIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNA 391
Query: 375 LIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
++D+Y K + +A F M K+ +SW ++IA ++G+ + I + +M GM P+
Sbjct: 392 VLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPD 451
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI 494
D T+ S+L AC+ + E + D + K + A S VVD++ + G ++ A +
Sbjct: 452 DFTYGSVLKACAAL-RSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLH 510
Query: 495 RQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDM 532
++ + S W+AIL S+ + + + DM
Sbjct: 511 DRIGGQQVVS-WNAILSGFSLNKESEEAQKFFSEMLDM 547
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 159/297 (53%), Gaps = 7/297 (2%)
Query: 12 QLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKV 71
+ L+F + PD TY S+L+ C ++ ++H +I +G S+ +++ V
Sbjct: 439 HFNEMLRFGMK-PDDF----TYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTV 493
Query: 72 IIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQ 131
+ Y K G + A+K DR+ + VVSW A++SG++ N E A FS ML G++ +
Sbjct: 494 VDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDH 553
Query: 132 FTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER 191
FT+++ L CA + ++ G+ I G I K +++ ++ S L+D+YAKCG + D+ ++FE+
Sbjct: 554 FTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEK 613
Query: 192 IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMK 250
+E++D VSWNAMI G A+ G ++ +F M ++ + P+ T ++LRA S G+
Sbjct: 614 VEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDG 673
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALIS 306
H + LE + ++D+ + + A + SM + D + L+S
Sbjct: 674 CRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 730
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 177/349 (50%), Gaps = 3/349 (0%)
Query: 170 SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
+ +L Y+ G I A LF+ + DVVSWNA++ G +G +S LF M R+G+
Sbjct: 87 NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVS 146
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
PD T +L++ EL Q+H L +K GLE + +L+D+Y K S+ A
Sbjct: 147 PDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCF 206
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ M + + +S A I+G +++ + + +LF +M +G+ CA ++
Sbjct: 207 FYGMPERNWVSWGAAIAGCVQNEQYVR-GLELFIEMQRLGLGVSQPSYASAFRSCAAMSC 265
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
LN GRQ+HA A K + S D VG A++D+YAK+ + DA RAF + + V + +++ G
Sbjct: 266 LNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVG 325
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
+ G G EA+ L++ M + + V+ + AC+ T +G ++ I +
Sbjct: 326 LVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVD 385
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
+ + V+DL+ + L AY + + M K + S W+AI+ A G+
Sbjct: 386 ICVN-NAVLDLYGKCKALMEAYLIFQGMKQKDSVS-WNAIIAALEQNGH 432
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%)
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
F D N ++ Y+ +G+I+ A FD M D +V+SW +L++GY + G E++
Sbjct: 75 FDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESV 134
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACS 446
+L+ +M G+ P+ TF LL +CS
Sbjct: 135 DLFVEMARRGVSPDRTTFAVLLKSCS 160
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 186/547 (34%), Positives = 309/547 (56%), Gaps = 1/547 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
+Y S + C +HAH I N + S+ + T ++ YAK + AR+AF +
Sbjct: 252 SYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGL 311
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P V + AM+ G + G A+ +F M+RS +R + + S ACA + G+
Sbjct: 312 PNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQ 371
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ K F ++ V +A+LDLY KC + +A+++F+ +++KD VSWNA+I L G
Sbjct: 372 QVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNG 431
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
DD+ F M+R GMKPD FT GS+L+A L +HD +IK GL S +
Sbjct: 432 HYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVAS 491
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
+++D+Y K G I A +L+ + ++S A++SGF+ + S+EA F +M+ +
Sbjct: 492 TVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLN-KESEEAQKFFSEMLDMGLK 550
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
D +L+ CAN+A++ LG+QIH K + D + + L+DMYAK G++ D+
Sbjct: 551 PDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLV 610
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLT 451
F+++ ++ +SW ++I GYA HG G EA+ ++++M+ E +VPN TF+++L ACSH GL
Sbjct: 611 FEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLF 670
Query: 452 CEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
+G F M Y++ P+ EHF+C+VD+ R + A I M + A +W +L
Sbjct: 671 DDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 730
Query: 512 ACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKN 571
C I + + ELAA N+ ++P+ S Y++LSN+Y +G W + +TR+L+++ L+K
Sbjct: 731 ICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKE 790
Query: 572 PGYSFLQ 578
PG S+++
Sbjct: 791 PGCSWIE 797
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 147/539 (27%), Positives = 261/539 (48%), Gaps = 10/539 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D +T+ LL+ C + +HA + G E ++ + ++ Y K + A F
Sbjct: 148 DRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFF 207
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
MPERN VSW A I+G QN L +F M R G+ +Q +Y+SA R+CA M L
Sbjct: 208 YGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLN 267
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
GR + K +F + V +A++D+YAK + DA F + V + NAM+ GL
Sbjct: 268 TGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLV 327
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G ++ LF+ M+R ++ D +L + A + Q+H L IK G +
Sbjct: 328 RAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDIC 387
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +++D+Y K ++ AY +++ M + D +S A+I+ + + H + F +M+
Sbjct: 388 VNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQ-NGHYDDTILHFNEMLRF 446
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
M DD +L CA + SL G +H K DA V + ++DMY K G I +A
Sbjct: 447 GMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEA 506
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ D +G + V+SW ++++G++ + EA + + +M G+ P+ TF ++L C++
Sbjct: 507 QKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANL 566
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
G ++ +I K +L S +VD++A+ G + + + ++ + S W+A
Sbjct: 567 ATIELGKQIHGQII-KQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVS-WNA 624
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSV----NYVVLSNIYTAAGAWDNARKTRKLM 563
++ +++G LG A R M+ E V +V + + G +D+ + LM
Sbjct: 625 MICGYALHG---LGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLM 680
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 217/458 (47%), Gaps = 3/458 (0%)
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
Y+ GD+ +A FD MP+ +VVSW A++SGY Q G + ++ +F M R GV ++ T+
Sbjct: 93 YSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTF 152
Query: 135 SSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER 194
+ L++C+ + L G + K ++ SAL+D+Y KC ++DA F +
Sbjct: 153 AVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPE 212
Query: 195 KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQI 254
++ VSW A I G LF M R G+ + S R+ L Q+
Sbjct: 213 RNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQL 272
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH 314
H IK S + +++DVYAK S+ A + + + + + A++ G R
Sbjct: 273 HAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVR-AGL 331
Query: 315 SKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNA 374
EA LF+ MI + D V L + + CA G+Q+H A K D V NA
Sbjct: 332 GIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNA 391
Query: 375 LIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
++D+Y K + +A F M K+ +SW ++IA ++G+ + I + +M GM P+
Sbjct: 392 VLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPD 451
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI 494
D T+ S+L AC+ + E + D + K + A S VVD++ + G ++ A +
Sbjct: 452 DFTYGSVLKACAAL-RSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLH 510
Query: 495 RQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDM 532
++ + S W+AIL S+ + + + DM
Sbjct: 511 DRIGGQQVVS-WNAILSGFSLNKESEEAQKFFSEMLDM 547
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 159/297 (53%), Gaps = 7/297 (2%)
Query: 12 QLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKV 71
+ L+F + PD TY S+L+ C ++ ++H +I +G S+ +++ V
Sbjct: 439 HFNEMLRFGMK-PDDF----TYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTV 493
Query: 72 IIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQ 131
+ Y K G + A+K DR+ + VVSW A++SG++ N E A FS ML G++ +
Sbjct: 494 VDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDH 553
Query: 132 FTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER 191
FT+++ L CA + ++ G+ I G I K +++ ++ S L+D+YAKCG + D+ ++FE+
Sbjct: 554 FTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEK 613
Query: 192 IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMK 250
+E++D VSWNAMI G A+ G ++ +F M ++ + P+ T ++LRA S G+
Sbjct: 614 VEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDG 673
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALIS 306
H + LE + ++D+ + + A + SM + D + L+S
Sbjct: 674 CRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 730
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 177/349 (50%), Gaps = 3/349 (0%)
Query: 170 SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
+ +L Y+ G I A LF+ + DVVSWNA++ G +G +S LF M R+G+
Sbjct: 87 NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVS 146
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
PD T +L++ EL Q+H L +K GLE + +L+D+Y K S+ A
Sbjct: 147 PDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCF 206
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ M + + +S A I+G +++ + + +LF +M +G+ CA ++
Sbjct: 207 FYGMPERNWVSWGAAIAGCVQNEQYVR-GLELFIEMQRLGLGVSQPSYASAFRSCAAMSC 265
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
LN GRQ+HA A K + S D VG A++D+YAK+ + DA RAF + + V + +++ G
Sbjct: 266 LNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVG 325
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
+ G G EA+ L++ M + + V+ + AC+ T +G ++ I +
Sbjct: 326 LVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVD 385
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
+ + V+DL+ + L AY + + M K + S W+AI+ A G+
Sbjct: 386 ICVN-NAVLDLYGKCKALMEAYLIFQGMKQKDSVS-WNAIIAALEQNGH 432
>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial [Vitis vinifera]
gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
Length = 700
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 195/556 (35%), Positives = 311/556 (55%), Gaps = 4/556 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D + +L+ C + + + +H I+ G + L T ++ YAK +V +R+ F
Sbjct: 137 DNVVFSIVLKACSELRETDEGRKLHCQIVKVGSPDSFVL-TGLVDMYAKCREVEDSRRVF 195
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D + +RNVV WT+MI GY QN + L++F+ M V NQ+T S + AC ++ L
Sbjct: 196 DEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALH 255
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ + G + K F N F+ + LLDLY KCG I DA+ +F+ + D+VSW AMI G A
Sbjct: 256 QGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYA 315
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
+G+ ++ LF + + P+ T S+L A L +H L IKLG E +
Sbjct: 316 QRGYPREALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLGSEDAT- 374
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+L+D+YAK I A ++ ++ D+I+ ++ISG+ ++ ++ EA +LF M
Sbjct: 375 FENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQN-GYAYEALELFDQMRSD 433
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS-SYDAAVGNALIDMYAKSGEIAD 387
+ D + L +L+ CA+V + +G +H +A K S VG AL++ YAK G+
Sbjct: 434 SVYPDAITLVSVLSACASVGAYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAES 493
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A FDEMG+KN I+W+++I GY G ++EL+ M E + PN+V F ++L ACSH
Sbjct: 494 ARVIFDEMGEKNTITWSAMIGGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTTILSACSH 553
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
+G+ EGW F M Y +P +H++C+VDL AR G+LE A + I ++ I+P SL
Sbjct: 554 SGMLGEGWRYFNTMCQVYNFVPSMKHYACMVDLLARAGRLEEALDFIEKIPIQPDVSLLG 613
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
A L C ++ LGE+A R + ++ P+K+ YV++SN+Y + G W A + +LM++R
Sbjct: 614 AFLHGCRLHSRFDLGEVAVRRMLELHPDKACYYVLMSNLYASEGRWSQANQVMELMKQRG 673
Query: 568 LRKNPGYSFLQSSKKN 583
L K PG+S + N
Sbjct: 674 LAKLPGWSLVDIETSN 689
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 167/519 (32%), Positives = 270/519 (52%), Gaps = 14/519 (2%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
SLL C + R+ IHA ++ +G +L TK++ Y G V AR FDR+
Sbjct: 44 SLLGICKTVSSLRK---IHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNP 100
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA-NQFTYSSALRACARMRWLQGGRMI 153
++ SW MI Y N + ++ LR + + +S L+AC+ +R GR +
Sbjct: 101 DLYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKL 160
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN 213
I K ++ FV + L+D+YAKC +ED+ +F+ I ++VV W +MI G
Sbjct: 161 HCQIVKVGSPDS-FVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCL 219
Query: 214 DDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSL 273
+ LF M ++ + +TLGS++ A L + +H +IK G + ++ L L
Sbjct: 220 KEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPL 279
Query: 274 IDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGID 333
+D+Y K G IR A+ ++ + D++S TA+I G+A+ + +EA LF D K + +
Sbjct: 280 LDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQ-RGYPREALKLFTDERWKDLLPN 338
Query: 334 DVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFD 393
V +L+ CA SLN+GR +H K S DA NAL+DMYAK I DA F+
Sbjct: 339 TVTTSSVLSACAQTGSLNMGRSVHCLGIKLGSE-DATFENALVDMYAKCHMIGDARYVFE 397
Query: 394 EMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCE 453
+ DK+VI+W S+I+GY ++GY +EA+EL+ +M+ + + P+ +T +S+L AC+ G
Sbjct: 398 TVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYRV 457
Query: 454 GWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGAC 513
G L I + + +++ +A+ G ESA + +M K T + WSA++G
Sbjct: 458 GSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNTIT-WSAMIGGY 516
Query: 514 SIYGNTSLGELAARNLF-DMEPEK-SVNYVVLSNIYTAA 550
I G+ S + LF DM EK N V+ + I +A
Sbjct: 517 GIQGDCS----RSLELFGDMLKEKLEPNEVIFTTILSAC 551
>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 813
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 194/577 (33%), Positives = 329/577 (57%), Gaps = 3/577 (0%)
Query: 3 IVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
++R K+G A+ + ++++ TY +L C + +H +I +G
Sbjct: 184 MLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSG 243
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+E + ++ ++ Y+K G++L ARK F+ MP+ + V+W +I+GY QNG+ + A +F+
Sbjct: 244 FEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFN 303
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
AM+ +GV+ + T++S L + L+ + + I + R ++++KSAL+D+Y K G
Sbjct: 304 AMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGG 363
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+E A +F++ DV AMI G + G N D+ FR ++++GM + T+ S+L
Sbjct: 364 DVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLP 423
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
A L ++H I+K LE+ + ++ D+YAK G + AY+ +R M D +
Sbjct: 424 ACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVC 483
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
++IS F+++ + A DLF+ M + D V L L+ AN+ +L G+++H +
Sbjct: 484 WNSMISSFSQNGK-PEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYV 542
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
+ S D V + LIDMY+K G +A A F+ M KN +SW S+IA Y HG E +
Sbjct: 543 IRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPRECL 602
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDL 480
+LY +M G+ P+ VTFL ++ AC H GL EG F M +Y I R EH++C+VDL
Sbjct: 603 DLYHEMLRAGIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYGIGARMEHYACMVDL 662
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNY 540
+ R G++ A++ I+ M P A +W +LGAC ++GN L +LA+R+L +++P+ S Y
Sbjct: 663 YGRAGRVHEAFDTIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYY 722
Query: 541 VVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
V+LSN++ AG W + K R LM+E+ ++K PGYS++
Sbjct: 723 VLLSNVHADAGEWASVLKVRSLMKEKGVQKIPGYSWI 759
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 145/520 (27%), Positives = 257/520 (49%), Gaps = 12/520 (2%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNG 60
++R + G AL F + + P T+ +++ C ++H + G
Sbjct: 83 MIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHDTARSLG 142
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+ +L + +I YA G + AR+ FD +P R+ + W M+ GY ++G +NA+ F
Sbjct: 143 FHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFC 202
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M S N TY+ L CA G + G + F + V + L+ +Y+KCG
Sbjct: 203 EMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCG 262
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+ A LF + + D V+WN +I G GF D++ LF +M+ G+KPD T S L
Sbjct: 263 NLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLP 322
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
+ + L ++H I++ + L +LIDVY K G + A ++++ + D+
Sbjct: 323 SILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAV 382
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
CTA+ISG+ + +A + F+ +I + M + + + +L CA VA+L G+++H
Sbjct: 383 CTAMISGYVL-HGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHI 441
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
K + VG+A+ DMYAK G + A F M D++ + W S+I+ ++++G AI
Sbjct: 442 LKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAI 501
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF--SCVV 478
+L+++M G + V+ S L A ++ G E+ +I R ++ F S ++
Sbjct: 502 DLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVI---RNAFSSDTFVASTLI 558
Query: 479 DLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
D++++ G L A+ + M+ K S W++I+ A YGN
Sbjct: 559 DMYSKCGNLALAWCVFNLMDGKNEVS-WNSIIAA---YGN 594
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/499 (27%), Positives = 245/499 (49%), Gaps = 4/499 (0%)
Query: 24 PDTLLDPSTYM-SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVL 82
P+TL +T + SL + C D +QA +H +I G S++V+ Y G
Sbjct: 4 PETLDSLTTQLESLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFR 63
Query: 83 SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA 142
A F + R + W MI G G+ + ALL + ML S V +++T+ ++AC
Sbjct: 64 DAGNLFFELELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACG 123
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
+ + ++ + + F +LF SAL+ LYA G+I DA +F+ + +D + WN
Sbjct: 124 GLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNV 183
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
M+ G G D++ F M + T IL +Q+H L+I G
Sbjct: 184 MLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSG 243
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
E ++ +L+ +Y+K G++ A +L+ +M +TD ++ LI+G+ + + + EA LF
Sbjct: 244 FEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQ-NGFTDEAAPLF 302
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
MI + D V L SL +++H++ +++ +D + +ALID+Y K
Sbjct: 303 NAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKG 362
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
G++ A + F + +V T++I+GY HG +AI ++ + EGMV N +T S+L
Sbjct: 363 GDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVL 422
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
AC+ G EL ++ K R+ S + D++A+ G+L+ AY R+M+ + +
Sbjct: 423 PACAAVAALKPGKELHCHILKK-RLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDS 481
Query: 503 ASLWSAILGACSIYGNTSL 521
W++++ + S G +
Sbjct: 482 VC-WNSMISSFSQNGKPEI 499
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 186/551 (33%), Positives = 317/551 (57%), Gaps = 2/551 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY++LL + IH + G S++ + T ++ + GDV SA++AF
Sbjct: 228 DKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAF 287
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ +R+VV + A+I+ AQ+G++ A + M GV N+ TY S L AC+ + L+
Sbjct: 288 KGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALE 347
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G++I I + ++ + +AL+ +YA+CG + A LF + ++D++SWNA+I G A
Sbjct: 348 AGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYA 407
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
+ ++ L++ M +G+KP T +L A IH+ I++ G++S+
Sbjct: 408 RREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGH 467
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
L +L+++Y + GS+ A ++ D+IS ++I+G A+ ++ + A+ LF++M +
Sbjct: 468 LANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSY-ETAYKLFQEMQNE 526
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
++ D++ +L+ C N +L LG+QIH + D +GNALI+MY + G + DA
Sbjct: 527 ELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDA 586
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND-VTFLSLLFACSH 447
F + ++V+SWT++I G A G +AIEL+ +M++EG P D TF S+L AC+H
Sbjct: 587 RNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNH 646
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
GL EG+++F+ M ++Y +LP EH+ C+V L R + + A +I QM P A++W
Sbjct: 647 AGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWE 706
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
+LGAC I+GN +L E AA N + Y++LSN+Y AAG WD+ K R++ME R
Sbjct: 707 TLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRG 766
Query: 568 LRKNPGYSFLQ 578
+RK PG S+++
Sbjct: 767 IRKEPGRSWIE 777
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 173/577 (29%), Positives = 291/577 (50%), Gaps = 35/577 (6%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
T D +TY++LLQ C K+ +A IHA ++ G ++ LS +I Y K VL A
Sbjct: 23 TETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAH 82
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
+ F MP R+V+SW ++IS YAQ G+ + A +F M +G N+ TY S L AC
Sbjct: 83 QVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPA 142
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
L+ G+ I I K + + V+++LL +Y KCG + A +F I +DVVS+N M+G
Sbjct: 143 ELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLG 202
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
A + + + LF M +G+ PD T ++L A L + +IH L ++ GL S
Sbjct: 203 LYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNS 262
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
++ +L+ + + G + SA Q ++ + D++ ALI+ A+ H+ EAF+ + M
Sbjct: 263 DIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQ-HGHNVEAFEQYYRM 321
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ ++ +LN C+ +L G+ IH+ + S D +GNALI MYA+ G++
Sbjct: 322 RSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDL 381
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A F M +++ISW ++IAGYA+ EA+ LYK+M+ EG+ P VTFL LL AC
Sbjct: 382 PKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSAC 441
Query: 446 SHTGLTCEGWELFTD---------------MINKYR---ILPRAEH------------FS 475
+++ +G + D ++N YR L A++ ++
Sbjct: 442 ANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWN 501
Query: 476 CVVDLFARRGQLESAYNMIRQMN---IKPTASLWSAILGACSIYGNTSLGELAARNLFDM 532
++ A+ G E+AY + ++M ++P ++++L C LG+ + +
Sbjct: 502 SMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITES 561
Query: 533 EPEKSVNY-VVLSNIYTAAGAWDNARKTRKLMEERSL 568
+ VN L N+Y G+ +AR ++ R +
Sbjct: 562 GLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDV 598
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 166/298 (55%), Gaps = 1/298 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L+ +TY+S+L C KA LIH+HI +G+ S++ + +I YA+ GD+ AR+
Sbjct: 328 LNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKAREL 387
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F MP+R+++SW A+I+GYA+ A+ ++ M GV+ + T+ L ACA
Sbjct: 388 FYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAY 447
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+MI I + N + +AL+++Y +CG + +A +FE + +DV+SWN+MI G
Sbjct: 448 ADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGH 507
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A G + ++ LF+ M + ++PD T S+L L QIH I + GL+
Sbjct: 508 AQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDV 567
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
L +LI++Y + GS++ A ++ S+ D++S TA+I G A D +A +LF M
Sbjct: 568 NLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCA-DQGEDMKAIELFWQM 624
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 205/621 (33%), Positives = 335/621 (53%), Gaps = 70/621 (11%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
LD S + LL C ++ R +HA II + + S + ++I Y K G V ARK
Sbjct: 16 FLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARK 75
Query: 87 AFDRMPERNV-------------------------------VSWTAMISGYAQNGYDENA 115
FDRM ERN+ SW +MISG+ Q+G + A
Sbjct: 76 LFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEA 135
Query: 116 LLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDL 175
L+ F+ M G N++++ SAL ACA ++ L+ G I + + ++ ++++ SAL+D+
Sbjct: 136 LVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDM 195
Query: 176 YAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTL 235
Y+KCG +E A +F+ + + VSWN++I G D++ +F M++ G++PD TL
Sbjct: 196 YSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTL 255
Query: 236 GSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG-SLIDVYAKYGSIRSAYQLYRSML 294
S++ A + + QIH ++K ++ + G +L+D+YAK I A ++ M
Sbjct: 256 ASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMP 315
Query: 295 KTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM-------------GIDDVILCL-- 339
++S T+++SG+A+ + K A +F +M++K + G ++ L L
Sbjct: 316 IRSVVSETSMVSGYAKA-SKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFR 374
Query: 340 ----------------MLNICANVASLNLGRQIHA------FAFKYQSSYDAAVGNALID 377
+LN CAN+A L LGRQ H+ F F+Y D VGN+LID
Sbjct: 375 LLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLID 434
Query: 378 MYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVT 437
MY K G + + R F M +K+ +SW ++I GYA++G+G++A+E++ KM G P+ VT
Sbjct: 435 MYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVT 494
Query: 438 FLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
+ +L ACSH GL EG F M ++ ++P +H++C+VDL R G LE A N+I +M
Sbjct: 495 MIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEM 554
Query: 498 NIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNAR 557
+++P A +W ++L AC ++ N LGE + L +++PE S YV+LSN+Y W N
Sbjct: 555 SMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVV 614
Query: 558 KTRKLMEERSLRKNPGYSFLQ 578
+ RKLM +R + K PG S+++
Sbjct: 615 RVRKLMRQRGVVKQPGCSWIE 635
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 221/645 (34%), Positives = 331/645 (51%), Gaps = 83/645 (12%)
Query: 15 QALKFSLSCPDTLLD--PSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVI 72
QAL S T+L+ ST SL Q RQAH AHI+ G ++ HL+TK++
Sbjct: 6 QALALLDSVQHTILNCLNSTTASLSQ-------TRQAH---AHILKTGLFNDTHLATKLL 55
Query: 73 IFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQF 132
YA A D +PE NV S++ +I +++ +AL FS ML G+ +
Sbjct: 56 SHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNR 115
Query: 133 TYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI 192
SA++ACA + L+ R + G F + FV+S+L+ +Y KC I DA +F+R+
Sbjct: 116 VLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRM 175
Query: 193 ERKDVVSWNAMIGGLAMQG------------------------------FNDDSFW---- 218
DVVSW+A++ A QG FN +
Sbjct: 176 FEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAV 235
Query: 219 -LFRSMMRQGMKPDCFTLGSILRASVGGIE-LMKISQIHDLIIKLGLESSNKLTGSLIDV 276
+F M +G +PD T+ S+L A VG +E L+ IH +IK GL S ++ +LID+
Sbjct: 236 LMFLDMHLRGFEPDGTTISSVLPA-VGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDM 294
Query: 277 YAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD------------------------- 311
Y K Q++ M D+ SC A I G +R+
Sbjct: 295 YGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSW 354
Query: 312 ---------DNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK 362
+ EA +LF++M + + + V + +L C N+A+L G+ H F+ +
Sbjct: 355 TSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLR 414
Query: 363 YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIEL 422
S D VG+ALIDMYAK G I + FD + KN++ W ++IAGYA HG EA+E+
Sbjct: 415 RGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEI 474
Query: 423 YKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFA 482
+ M+ G P+ ++F +L ACS +GLT EG F M +KY I R EH++C+V L +
Sbjct: 475 FDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLS 534
Query: 483 RRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVV 542
R G+LE AY MIR+M + P A +W A+L +C ++ N SLGE+AA LF++EP NY++
Sbjct: 535 RAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYIL 594
Query: 543 LSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKNILLL 587
LSNIY + G W+ + R +M+ + LRKNPG S+++ K +LL
Sbjct: 595 LSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLL 639
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 186/547 (34%), Positives = 309/547 (56%), Gaps = 1/547 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
+Y S + C +HAH I N + S+ + T ++ YAK + AR+AF +
Sbjct: 294 SYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGL 353
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P V + AM+ G + G A+ +F M+RS +R + + S ACA + G+
Sbjct: 354 PNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQ 413
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ K F ++ V +A+LDLY KC + +A+++F+ +++KD VSWNA+I L G
Sbjct: 414 QVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNG 473
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
DD+ F M+R GMKPD FT GS+L+A L +HD +IK GL S +
Sbjct: 474 HYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVAS 533
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
+++D+Y K G I A +L+ + ++S A++SGF+ + S+EA F +M+ +
Sbjct: 534 TVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLN-KESEEAQKFFSEMLDMGLK 592
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
D +L+ CAN+A++ LG+QIH K + D + + L+DMYAK G++ D+
Sbjct: 593 PDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLV 652
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLT 451
F+++ ++ +SW ++I GYA HG G EA+ ++++M+ E +VPN TF+++L ACSH GL
Sbjct: 653 FEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLF 712
Query: 452 CEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
+G F M Y++ P+ EHF+C+VD+ R + A I M + A +W +L
Sbjct: 713 DDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 772
Query: 512 ACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKN 571
C I + + ELAA N+ ++P+ S Y++LSN+Y +G W + +TR+L+++ L+K
Sbjct: 773 ICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKE 832
Query: 572 PGYSFLQ 578
PG S+++
Sbjct: 833 PGCSWIE 839
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 147/539 (27%), Positives = 261/539 (48%), Gaps = 10/539 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D +T+ LL+ C + +HA + G E ++ + ++ Y K + A F
Sbjct: 190 DRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFF 249
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
MPERN VSW A I+G QN L +F M R G+ +Q +Y+SA R+CA M L
Sbjct: 250 YGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLN 309
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
GR + K +F + V +A++D+YAK + DA F + V + NAM+ GL
Sbjct: 310 TGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLV 369
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G ++ LF+ M+R ++ D +L + A + Q+H L IK G +
Sbjct: 370 RAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDIC 429
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +++D+Y K ++ AY +++ M + D +S A+I+ + + H + F +M+
Sbjct: 430 VNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQ-NGHYDDTILHFNEMLRF 488
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
M DD +L CA + SL G +H K DA V + ++DMY K G I +A
Sbjct: 489 GMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEA 548
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ D +G + V+SW ++++G++ + EA + + +M G+ P+ TF ++L C++
Sbjct: 549 QKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANL 608
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
G ++ +I K +L S +VD++A+ G + + + ++ + S W+A
Sbjct: 609 ATIELGKQIHGQII-KQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVS-WNA 666
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSV----NYVVLSNIYTAAGAWDNARKTRKLM 563
++ +++G LG A R M+ E V +V + + G +D+ + LM
Sbjct: 667 MICGYALHG---LGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLM 722
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 217/458 (47%), Gaps = 3/458 (0%)
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
Y+ GD+ +A FD MP+ +VVSW A++SGY Q G + ++ +F M R GV ++ T+
Sbjct: 135 YSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTF 194
Query: 135 SSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER 194
+ L++C+ + L G + K ++ SAL+D+Y KC ++DA F +
Sbjct: 195 AVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPE 254
Query: 195 KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQI 254
++ VSW A I G LF M R G+ + S R+ L Q+
Sbjct: 255 RNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQL 314
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH 314
H IK S + +++DVYAK S+ A + + + + + A++ G R
Sbjct: 315 HAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVR-AGL 373
Query: 315 SKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNA 374
EA LF+ MI + D V L + + CA G+Q+H A K D V NA
Sbjct: 374 GIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNA 433
Query: 375 LIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
++D+Y K + +A F M K+ +SW ++IA ++G+ + I + +M GM P+
Sbjct: 434 VLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPD 493
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI 494
D T+ S+L AC+ + E + D + K + A S VVD++ + G ++ A +
Sbjct: 494 DFTYGSVLKACAAL-RSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLH 552
Query: 495 RQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDM 532
++ + S W+AIL S+ + + + DM
Sbjct: 553 DRIGGQQVVS-WNAILSGFSLNKESEEAQKFFSEMLDM 589
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 159/297 (53%), Gaps = 7/297 (2%)
Query: 12 QLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKV 71
+ L+F + PD TY S+L+ C ++ ++H +I +G S+ +++ V
Sbjct: 481 HFNEMLRFGMK-PDDF----TYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTV 535
Query: 72 IIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQ 131
+ Y K G + A+K DR+ + VVSW A++SG++ N E A FS ML G++ +
Sbjct: 536 VDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDH 595
Query: 132 FTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER 191
FT+++ L CA + ++ G+ I G I K +++ ++ S L+D+YAKCG + D+ ++FE+
Sbjct: 596 FTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEK 655
Query: 192 IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMK 250
+E++D VSWNAMI G A+ G ++ +F M ++ + P+ T ++LRA S G+
Sbjct: 656 VEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDG 715
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALIS 306
H + LE + ++D+ + + A + SM + D + L+S
Sbjct: 716 CRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 772
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 177/349 (50%), Gaps = 3/349 (0%)
Query: 170 SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
+ +L Y+ G I A LF+ + DVVSWNA++ G +G +S LF M R+G+
Sbjct: 129 NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVS 188
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
PD T +L++ EL Q+H L +K GLE + +L+D+Y K S+ A
Sbjct: 189 PDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCF 248
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ M + + +S A I+G +++ + + +LF +M +G+ CA ++
Sbjct: 249 FYGMPERNWVSWGAAIAGCVQNEQYVR-GLELFIEMQRLGLGVSQPSYASAFRSCAAMSC 307
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
LN GRQ+HA A K + S D VG A++D+YAK+ + DA RAF + + V + +++ G
Sbjct: 308 LNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVG 367
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
+ G G EA+ L++ M + + V+ + AC+ T +G ++ I +
Sbjct: 368 LVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVD 427
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
+ + V+DL+ + L AY + + M K + S W+AI+ A G+
Sbjct: 428 ICVN-NAVLDLYGKCKALMEAYLIFQGMKQKDSVS-WNAIIAALEQNGH 474
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%)
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
F D N ++ Y+ +G+I+ A FD M D +V+SW +L++GY + G E++
Sbjct: 117 FDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESV 176
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACS 446
+L+ +M G+ P+ TF LL +CS
Sbjct: 177 DLFVEMARRGVSPDRTTFAVLLKSCS 202
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 196/574 (34%), Positives = 320/574 (55%), Gaps = 11/574 (1%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
T ++ S Y LLQ CID+ +A +IH HI+ G+ +L + T ++ Y+K G + SA
Sbjct: 60 TRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAH 119
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
K FD +P RNV +WT +++GY QN + AL +F ML +G + +T L AC+ ++
Sbjct: 120 KVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQ 179
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
++ G+ + + K + + ++L Y+K +E A F+ I+ KDV+SW ++I
Sbjct: 180 SIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVIS 239
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
G S F M+ GMKP+ +TL S+L A + L +QIH L IKLG S
Sbjct: 240 SCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGS 299
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR------DD----NHS 315
S + S++ +Y K G + A +L+ M ++++ A+I+G A+ DD
Sbjct: 300 SILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSG 359
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNAL 375
A +F+ + M D +L++C+N+ +L G QIH K D VG AL
Sbjct: 360 STALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTAL 419
Query: 376 IDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND 435
+ MY K G I A++AF EM + +ISWTS+I G+A+HG +A++L++ M+ G+ PN
Sbjct: 420 VSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQ 479
Query: 436 VTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIR 495
VTF+ +L ACSH GL E F M +Y I P +HF+C++D++ R G++E A++++
Sbjct: 480 VTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVH 539
Query: 496 QMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDN 555
+MN +P ++WS ++ C +G + LG AA L ++P+ YV L N++ +AG W +
Sbjct: 540 KMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKD 599
Query: 556 ARKTRKLMEERSLRKNPGYSFLQSSKKNILLLEP 589
K RKLM+E + K +S++ S K+ + +P
Sbjct: 600 VSKVRKLMKEEKVGKLKDWSWI-SIKEKVYSFKP 632
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/456 (26%), Positives = 226/456 (49%), Gaps = 21/456 (4%)
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
G R Y L+ C RMI G I K F E+LFV + L+++Y+KCG +E A
Sbjct: 59 GTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESA 118
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA--SV 243
+F+ + R++V +W ++ G + LF M+ G P +TLG +L A S+
Sbjct: 119 HKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL 178
Query: 244 GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTA 303
IE K Q+H +IK ++ + SL Y+K+ + A + ++ + + D+IS T+
Sbjct: 179 QSIEFGK--QVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTS 236
Query: 304 LISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY 363
+IS D+ + + F DM+ M ++ L +L+ C + +L+LG QIH+ + K
Sbjct: 237 VISSCC-DNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKL 295
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAK----------- 412
+ N+++ +Y K G + +A + F+ M N+++W ++IAG+AK
Sbjct: 296 GYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAA 355
Query: 413 HGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAE 472
H G A+ +++K+ GM P+ TF S+L CS+ +G ++ +I K +L
Sbjct: 356 HKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQII-KSGVLADVV 414
Query: 473 HFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG--NTSLGELAARNLF 530
+ +V ++ + G ++ A +M + S W++++ + +G +L L
Sbjct: 415 VGTALVSMYNKCGSIDKASKAFLEMPSRTMIS-WTSMITGFARHGLSQQALQLFEDMRLV 473
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
++P + V +V + + + AG D A +LM+++
Sbjct: 474 GIKPNQ-VTFVGVLSACSHAGLADEALYYFELMQKQ 508
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 196/537 (36%), Positives = 308/537 (57%), Gaps = 7/537 (1%)
Query: 52 IHAHIITNGY-ESNLHLSTKVIIFYAK-VGDVLSARKAFDRMPERNVVSWTAMISGYAQN 109
I +I GY +S++ + +I + K GD++SA K F++MPERN V+WT MI+ Q
Sbjct: 190 IFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQF 249
Query: 110 GYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK 169
GY A+ +F M+ SG ++FT S + ACA M L G+ + + + V
Sbjct: 250 GYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVG 309
Query: 170 SALLDLYAKC---GWIEDAWILFERIERKDVVSWNAMIGGLAMQG-FNDDSFWLFRSMMR 225
L+++YAKC G + A +F++I +V SW AMI G +G +++++ LFR M+
Sbjct: 310 CCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMIL 369
Query: 226 QGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRS 285
+ P+ FT S L+A L Q+ +KLG S N + SLI +YA+ G I
Sbjct: 370 THVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDD 429
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
A + + + + ++IS +I +A++ N S+EA +LF ++ + MG +L+ A
Sbjct: 430 ARKAFDILFEKNLISYNTVIDAYAKNLN-SEEALELFNEIEDQGMGASAFTFASLLSGAA 488
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
++ ++ G QIHA K + +V NALI MY++ G I A + F++M D+NVISWTS
Sbjct: 489 SIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTS 548
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
+I G+AKHG+ +A+EL+ KM EG+ PN+VT++++L ACSH GL EGW+ F M ++
Sbjct: 549 IITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEH 608
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
++PR EH++C+VD+ R G L A I M K A +W LGAC ++GN LG+ A
Sbjct: 609 GVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHA 668
Query: 526 ARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
A+ + + EP Y++LSN+Y + WD RK M+E+ L K G S+++ K
Sbjct: 669 AKMIIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENK 725
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 160/542 (29%), Positives = 280/542 (51%), Gaps = 9/542 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY L+ CI ++ L+H + + + + +I Y+K G A F
Sbjct: 65 DLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIF 124
Query: 89 DRM-PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
M R+++SW+AM+S +A N ALL F M+ +G N++ +++A RAC+ ++
Sbjct: 125 RLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFV 184
Query: 148 QGGRMIQG-SIQKGRFVENLFVKSALLDLYAKC-GWIEDAWILFERIERKDVVSWNAMIG 205
G I G I+ G ++ V L+D++ K G + A+ +FE++ ++ V+W MI
Sbjct: 185 SVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMIT 244
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
L G+ ++ LF M+ G +PD FTL ++ A L+ Q+H I+ GL
Sbjct: 245 RLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTL 304
Query: 266 SNKLTGSLIDVYAKY---GSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
+ LI++YAK GS+ +A +++ +L ++ S TA+I+G+ + + +EA DLF
Sbjct: 305 DRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLF 364
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
+ MIL + + L CAN+A+L +G Q+ A K S V N+LI MYA+S
Sbjct: 365 RGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARS 424
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
G I DA +AFD + +KN+IS+ ++I YAK+ EA+EL+ +++ +GM + TF SLL
Sbjct: 425 GRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLL 484
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
+ G +G ++ +I L ++ + ++ +++R G +ESA+ + M +
Sbjct: 485 SGAASIGTIGKGEQIHARVIKSGLKLNQSV-CNALISMYSRCGNIESAFQVFEDMEDRNV 543
Query: 503 ASLWSAILGACSIYG-NTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRK 561
S W++I+ + +G T EL + L + V Y+ + + + G + K K
Sbjct: 544 IS-WTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFK 602
Query: 562 LM 563
M
Sbjct: 603 SM 604
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 195/393 (49%), Gaps = 17/393 (4%)
Query: 109 NGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFV 168
NG A+ M+ G + TYS L+ C R R G ++ + + +
Sbjct: 44 NGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVT 103
Query: 169 KSALLDLYAKCGWIEDAWILFERI-ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
++L+ LY+KCG E A +F + +D++SW+AM+ A + F M+ G
Sbjct: 104 LNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENG 163
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG-SLIDVYAK-YGSIRS 285
P+ + + RA + I +IK G S+ G LID++ K G + S
Sbjct: 164 YYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVS 223
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
A++++ M + + ++ T +I+ + ++ EA DLF DMI D L +++ CA
Sbjct: 224 AFKVFEKMPERNAVTWTLMITRLMQ-FGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACA 282
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK---SGEIADANRAFDEMGDKNVIS 402
N+ L LG+Q+H+ A ++ + D VG LI+MYAK G + A + FD++ D NV S
Sbjct: 283 NMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFS 342
Query: 403 WTSLIAGYA-KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM 461
WT++I GY K GY EA++L++ M ++PN TF S L AC++ G ++FT
Sbjct: 343 WTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFT-- 400
Query: 462 INKYRILPRAEHFSCV----VDLFARRGQLESA 490
+ + +CV + ++AR G+++ A
Sbjct: 401 ---HAVKLGFSSVNCVANSLISMYARSGRIDDA 430
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 138/263 (52%), Gaps = 1/263 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ S L+ C + A R + H + G+ S ++ +I YA+ G + ARKAFD +
Sbjct: 378 TFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDIL 437
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
E+N++S+ +I YA+N E AL +F+ + G+ A+ FT++S L A + + G
Sbjct: 438 FEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGE 497
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I + K N V +AL+ +Y++CG IE A+ +FE +E ++V+SW ++I G A G
Sbjct: 498 QIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHG 557
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLT 270
F + LF M+ +G++P+ T ++L A S G+ + + G+ +
Sbjct: 558 FATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHY 617
Query: 271 GSLIDVYAKYGSIRSAYQLYRSM 293
++D+ + GS+ A Q SM
Sbjct: 618 ACIVDILGRSGSLSEAIQFINSM 640
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 194/582 (33%), Positives = 319/582 (54%), Gaps = 3/582 (0%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNG 60
I+ + G +K+A D ++PS T++ +L C + HA +I G
Sbjct: 133 IIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVG 192
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+ S+ + T ++ Y K G + AR+ FD + +R+V ++ MI GYA++G E A +F
Sbjct: 193 FVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFY 252
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M + G + N+ ++ S L C+ L G+ + V+++ V +AL+ +Y CG
Sbjct: 253 RMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCG 312
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
IE A +F++++ +DVVSW MI G A +D+F LF +M +G++PD T I+
Sbjct: 313 SIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIIN 372
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
A +L +IH +++ G + + +L+ +YAK G+I+ A Q++ +M + D++S
Sbjct: 373 ACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVS 432
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
+A+I + ++ +EAF+ F M + D V +LN C ++ +L+LG +I+ A
Sbjct: 433 WSAMIGAYV-ENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQA 491
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
K VGNALI+M K G I A F+ M ++V++W +I GY+ HG EA+
Sbjct: 492 IKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREAL 551
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDL 480
+L+ +M E PN VTF+ +L ACS G EG F+ +++ I+P E + C+VDL
Sbjct: 552 DLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDL 611
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNY 540
R G+L+ A +I +M +KP +S+WS +L AC IYGN + E AA EP Y
Sbjct: 612 LGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVY 671
Query: 541 VVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
V LS++Y AAG W+N K RK+ME R +RK G ++++ K
Sbjct: 672 VQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIEVEGK 713
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 162/536 (30%), Positives = 282/536 (52%), Gaps = 12/536 (2%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D TY+ L Q C+ + + HII +G + N++ +I ++ G++L AR+
Sbjct: 59 IDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQT 118
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD + + VV+W A+I+GYAQ G+ + A +F M+ + + T+ L AC+ L
Sbjct: 119 FDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGL 178
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G+ + K FV + + +AL+ +Y K G ++ A +F+ + ++DV ++N MIGG
Sbjct: 179 KLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGY 238
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A G + +F LF M ++G KP+ + SIL L +H + GL
Sbjct: 239 AKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDV 298
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
++ +LI +Y GSI A +++ M D++S T +I G+A + N ++AF LF M
Sbjct: 299 RVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSN-IEDAFGLFATMQE 357
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ + D + ++N CA+ A L+L R+IH+ + D V AL+ MYAK G I D
Sbjct: 358 EGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKD 417
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A + FD M ++V+SW+++I Y ++G G EA E + MK + P+ VT+++LL AC H
Sbjct: 418 ARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGH 477
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
G G E++T I K ++ + ++++ + G +E A + M ++ W+
Sbjct: 478 LGALDLGMEIYTQAI-KADLVSHIPVGNALINMNVKHGSIERARYIFENM-VQRDVVTWN 535
Query: 508 AILGACSIYGNTSLGELAARNLFD-MEPEK----SVNYVVLSNIYTAAGAWDNARK 558
++G S++GN A +LFD M E+ SV +V + + + AG + R+
Sbjct: 536 VMIGGYSLHGNAR----EALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRR 587
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 203/583 (34%), Positives = 325/583 (55%), Gaps = 13/583 (2%)
Query: 3 IVRANFKTGQLKQALKF---SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
++R GQ AL F L C TL D T+ +++ C + ++H I
Sbjct: 118 MIRGFTMMGQFDFALLFYFKMLGC-GTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFM 176
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G+E ++ + + +I FY++ G + AR FDRMP ++ V W M++GY +NG +NA VF
Sbjct: 177 GFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVF 236
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG-----SIQKGRFVENLFVKSALLD 174
M R+ N T++ L CA + G + G ++ V N F AL+D
Sbjct: 237 MEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTF---ALID 293
Query: 175 LYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFT 234
+Y KC +E A +F++ D+V AMI G + G N+++ +FR ++++ M+ + T
Sbjct: 294 IYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVT 353
Query: 235 LGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML 294
L S+L A G L ++H I+K G S + +++D+YAK G + A+Q + +
Sbjct: 354 LASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGIS 413
Query: 295 KTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGR 354
D + ++I+ +++ +EA DLF+ M + D V + L+ CAN+ +L+ G+
Sbjct: 414 DKDAVCWNSMITSCSQNGK-PEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGK 472
Query: 355 QIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG 414
+IHAF + D +ALIDMY+K G + A R FD M +KN +SW S+IA Y HG
Sbjct: 473 EIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHG 532
Query: 415 YGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF 474
+++ L+ M +G+ P+ VTFL+++ AC H G EG F M + I+ R EH+
Sbjct: 533 RLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHY 592
Query: 475 SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEP 534
+C+VDLF R G+L A+ MI M P A +W +LGAC ++GN L E+A+RNLFD++P
Sbjct: 593 ACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDP 652
Query: 535 EKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
+ S YV+LSN++ AG W++ K R LM+ER ++K PG S++
Sbjct: 653 QNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWI 695
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 166/566 (29%), Positives = 284/566 (50%), Gaps = 24/566 (4%)
Query: 12 QLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKV 71
+ + L+FS+ D+L +S+LQ C D Q HA ++ NG N L TK+
Sbjct: 30 NIGKPLQFSIHNDDSL--APQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKL 87
Query: 72 IIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQ 131
+ Y G L A+ F ++ W MI G+ G + ALL + ML G ++
Sbjct: 88 LGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDK 147
Query: 132 FTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER 191
+T+ ++AC + + GR++ IQ F ++FV S+L+ Y++ G I DA LF+R
Sbjct: 148 YTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDR 207
Query: 192 IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI 251
+ KD V WN M+ G G D++ +F M R P+ T +L I +
Sbjct: 208 MPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFG 267
Query: 252 SQIHDLIIKLGLESSNKL--TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFA 309
SQ+H L++ GLE + + T +LID+Y K + A +++ DI+ CTA+ISG+
Sbjct: 268 SQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYV 327
Query: 310 RDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDA 369
+ + A ++F+ ++ ++M + V L +L CA +A+L LG+++H K
Sbjct: 328 L-NGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSC 386
Query: 370 AVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE 429
VG+A++DMYAK G + A++ F + DK+ + W S+I +++G EAI+L+++M
Sbjct: 387 YVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMA 446
Query: 430 GMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF--SCVVDLFARRGQL 487
G + V+ + L AC++ G E+ M+ R R++ F S ++D++++ G L
Sbjct: 447 GTKYDCVSISAALSACANLPALHYGKEIHAFMM---RGAFRSDLFAESALIDMYSKCGNL 503
Query: 488 ESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA-ARNLFD------MEPEKSVNY 540
+ A + M K S W++I+ A YGN G L + NLF ++P+ V +
Sbjct: 504 DLACRVFDTMEEKNEVS-WNSIIAA---YGNH--GRLKDSLNLFHGMLGDGIQPDH-VTF 556
Query: 541 VVLSNIYTAAGAWDNARKTRKLMEER 566
+ + + AG D + M E
Sbjct: 557 LAIISACGHAGQVDEGIHYFRCMTEE 582
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 196/574 (34%), Positives = 320/574 (55%), Gaps = 11/574 (1%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
T ++ S Y LLQ CID+ +A +IH HI+ G+ +L + T ++ Y+K G + SA
Sbjct: 54 TRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAH 113
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
K FD +P RNV +WT +++GY QN + AL +F ML +G + +T L AC+ ++
Sbjct: 114 KVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQ 173
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
++ G+ + + K + + ++L Y+K +E A F+ I+ KDV+SW ++I
Sbjct: 174 SIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVIS 233
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
G S F M+ GMKP+ +TL S+L A + L +QIH L IKLG S
Sbjct: 234 SCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGS 293
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR------DD----NHS 315
S + S++ +Y K G + A +L+ M ++++ A+I+G A+ DD
Sbjct: 294 SILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSG 353
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNAL 375
A +F+ + M D +L++C+N+ +L G QIH K D VG AL
Sbjct: 354 STALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTAL 413
Query: 376 IDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND 435
+ MY K G I A++AF EM + +ISWTS+I G+A+HG +A++L++ M+ G+ PN
Sbjct: 414 VSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQ 473
Query: 436 VTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIR 495
VTF+ +L ACSH GL E F M +Y I P +HF+C++D++ R G++E A++++
Sbjct: 474 VTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVH 533
Query: 496 QMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDN 555
+MN +P ++WS ++ C +G + LG AA L ++P+ YV L N++ +AG W +
Sbjct: 534 KMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKD 593
Query: 556 ARKTRKLMEERSLRKNPGYSFLQSSKKNILLLEP 589
K RKLM+E + K +S++ S K+ + +P
Sbjct: 594 VSKVRKLMKEEKVGKLKDWSWI-SIKEKVYSFKP 626
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/456 (26%), Positives = 226/456 (49%), Gaps = 21/456 (4%)
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
G R Y L+ C RMI G I K F E+LFV + L+++Y+KCG +E A
Sbjct: 53 GTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESA 112
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA--SV 243
+F+ + R++V +W ++ G + LF M+ G P +TLG +L A S+
Sbjct: 113 HKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL 172
Query: 244 GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTA 303
IE K Q+H +IK ++ + SL Y+K+ + A + ++ + + D+IS T+
Sbjct: 173 QSIEFGK--QVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTS 230
Query: 304 LISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY 363
+IS D+ + + F DM+ M ++ L +L+ C + +L+LG QIH+ + K
Sbjct: 231 VISSCC-DNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKL 289
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAK----------- 412
+ N+++ +Y K G + +A + F+ M N+++W ++IAG+AK
Sbjct: 290 GYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAA 349
Query: 413 HGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAE 472
H G A+ +++K+ GM P+ TF S+L CS+ +G ++ +I K +L
Sbjct: 350 HKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQII-KSGVLADVV 408
Query: 473 HFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG--NTSLGELAARNLF 530
+ +V ++ + G ++ A +M + S W++++ + +G +L L
Sbjct: 409 VGTALVSMYNKCGSIDKASKAFLEMPSRTMIS-WTSMITGFARHGLSQQALQLFEDMRLV 467
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
++P + V +V + + + AG D A +LM+++
Sbjct: 468 GIKPNQ-VTFVGVLSACSHAGLADEALYYFELMQKQ 502
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 201/559 (35%), Positives = 311/559 (55%), Gaps = 4/559 (0%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L D + ++Q K R+ +HA +I GY L+ ++ Y+K G++ A K
Sbjct: 2 LRDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALK 61
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FD MP+RN+VSWTAMISG +QN A+ F M G QF +SSA+RACA +
Sbjct: 62 LFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGS 121
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
++ G+ + K LFV S L D+Y+KCG + DA +FE + KD VSW AMI G
Sbjct: 122 IEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDG 181
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLES 265
+ G +++ F+ M+ + + D L S L A G ++ K + +H ++KLG ES
Sbjct: 182 YSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGA-CGALKACKFGRSVHSSVVKLGFES 240
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT-DIISCTALISGFARDDNHSKEAFDLFKD 324
+ +L D+Y+K G + SA ++ + +++S T LI G+ + K +F +
Sbjct: 241 DIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEK-GLSVFVE 299
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
+ + + ++ ++ CAN A+L G Q+HA K D V + L+DMY K G
Sbjct: 300 LRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGL 359
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ A +AFDE+GD I+W SL++ + +HG G +AI+++++M G+ PN +TF+SLL
Sbjct: 360 LEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTG 419
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
CSH GL EG + F M Y ++P EH+SCV+DL R G+L+ A I +M +P A
Sbjct: 420 CSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAF 479
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
W + LGAC I+G+ +G+LAA L +EP+ S V+LSNIY W++ R R M
Sbjct: 480 GWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMR 539
Query: 565 ERSLRKNPGYSFLQSSKKN 583
+ +++K PGYS++ K
Sbjct: 540 DGNVKKLPGYSWVDVGYKT 558
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 134/271 (49%), Gaps = 2/271 (0%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
+ +D S L C KA + +H+ ++ G+ES++ + + Y+K GD+ SA
Sbjct: 202 EVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESA 261
Query: 85 RKAFDRMPE-RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
F E RNVVS+T +I GY + E L VF + R G+ N+FT+SS ++ACA
Sbjct: 262 SNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACAN 321
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
L+ G + + K F E+ FV S L+D+Y KCG +E A F+ I ++WN++
Sbjct: 322 QAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSL 381
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLG 262
+ G D+ +F M+ +G+KP+ T S+L S G+ + + + G
Sbjct: 382 VSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYG 441
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ + +ID+ + G ++ A + M
Sbjct: 442 VVPGEEHYSCVIDLLGRAGRLKEAKEFINRM 472
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 172/367 (46%), Gaps = 42/367 (11%)
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
M D L +++ L + Q+H L+I G LT L+++Y+K G + A
Sbjct: 1 MLRDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHAL 60
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
+L+ +M + +++S TA+ISG +++ S EA F M + + CA++
Sbjct: 61 KLFDTMPQRNLVSWTAMISGLSQNSKFS-EAIRTFCGMRICGEVPTQFAFSSAIRACASL 119
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI 407
S+ +G+Q+H A K+ + VG+ L DMY+K G + DA + F+EM K+ +SWT++I
Sbjct: 120 GSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMI 179
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS-----------HTGLTCEGWE 456
GY+K G EA+ +KKM E + + S L AC H+ + G+E
Sbjct: 180 DGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFE 239
Query: 457 -------LFTDMINKYRILPRAEH-------------FSCVVDLFARRGQLE---SAYNM 493
TDM +K + A + ++C++D + Q+E S +
Sbjct: 240 SDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVE 299
Query: 494 IRQMNIKPTASLWSAILGAC----SIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTA 549
+R+ I+P +S+++ AC ++ T L + FD +P S +L ++Y
Sbjct: 300 LRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS---SILVDMYGK 356
Query: 550 AGAWDNA 556
G + A
Sbjct: 357 CGLLEQA 363
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 187/555 (33%), Positives = 318/555 (57%), Gaps = 1/555 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L+P + ++L+ + + + +HA + G++S+ + T +I Y+ G AR+
Sbjct: 143 LNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQV 202
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD + +++VSWT M++ Y +N E +L +FS M G + N FT++S L+AC +
Sbjct: 203 FDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVF 262
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ + G K ++E LFV L+DLY K G ++DA +FE + + DV+ W+ MI
Sbjct: 263 NVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARY 322
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A ++++ +F M R + P+ FTL S+L+A ++L +QIH ++K+GL+ +
Sbjct: 323 AQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNV 382
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
++ +L+D+YAK G + ++ QL+ +S +I G+ + N K A LFKDM+
Sbjct: 383 FVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEK-ALILFKDMLE 441
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
++ +V +L CA +A+L G QIH+ + K + VGNALIDMYAK G I D
Sbjct: 442 CQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKD 501
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A FD + + + +SW ++I+GY+ HG EA++ ++ M P+ VTF+ +L ACS+
Sbjct: 502 ARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSN 561
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
GL G F M+ +Y I P AEH++C+V L R G L+ A ++ ++ +P+ +W
Sbjct: 562 AGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWR 621
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
A+L AC I+ + LG ++A+ + ++EPE +V+LSNIY A W N R M+ +
Sbjct: 622 ALLSACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRWGNVASIRTSMKRKG 681
Query: 568 LRKNPGYSFLQSSKK 582
+RK PG S++++ +
Sbjct: 682 IRKEPGLSWIENQGR 696
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 164/561 (29%), Positives = 278/561 (49%), Gaps = 24/561 (4%)
Query: 16 ALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFY 75
A + S S P+ + Y SLLQ CI +H II G +L + ++ FY
Sbjct: 32 AQRTSHSSPE--FNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFY 89
Query: 76 AKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYS 135
K + A K FD MP+RN VS+ +I GY+Q A+ +FS + G N F +S
Sbjct: 90 VKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFS 149
Query: 136 SALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERK 195
+ L+ W + G + + K F + FV +AL+D Y+ CG+ E A +F+ IE K
Sbjct: 150 TVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYK 209
Query: 196 DVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-I 254
D+VSW M+ ++S LF M G KP+ FT S+L+A V G+E+ + + +
Sbjct: 210 DMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACV-GLEVFNVGKAV 268
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH 314
H K + LID+Y K G + A Q++ M K D+I + +I+ +A+ +
Sbjct: 269 HGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSE-Q 327
Query: 315 SKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNA 374
S+EA ++F M + + L +L CA++ L LG QIH K + V NA
Sbjct: 328 SEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNA 387
Query: 375 LIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
L+DMYAK G + ++ + F E + +SW ++I GY + G G +A+ L+K M +
Sbjct: 388 LMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGT 447
Query: 435 DVTFLSLLFACSHTGLTCEGWELFT----DMINKYRILPRAEHFSCVVDLFARRGQLESA 490
+VT+ S+L AC+ G ++ + + +K ++ A ++D++A+ G ++ A
Sbjct: 448 EVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNA-----LIDMYAKCGNIKDA 502
Query: 491 ---YNMIRQMNIKPTASLWSAILGACSIYG--NTSLGELAARNLFDMEPEKSVNYVVLSN 545
++M+R+ + W+A++ S++G +L + + +P+K V +V + +
Sbjct: 503 RLVFDMLREHD----QVSWNAMISGYSVHGLYGEALKTFESMLETECKPDK-VTFVGILS 557
Query: 546 IYTAAGAWDNARKTRKLMEER 566
+ AG D + K M E
Sbjct: 558 ACSNAGLLDRGQAYFKSMVEE 578
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 190/553 (34%), Positives = 314/553 (56%), Gaps = 3/553 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L+P + ++L+ + + ++H ++ GY SN + T +I Y+ G V AR+
Sbjct: 44 LNPFVFTTVLKLLVSMEWAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREV 103
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD + +++VSWT MI+ YA+N AL FS M +G + N FT++ L+AC ++
Sbjct: 104 FDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNF 163
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ + S+ K + +L+V LL+LY +CG +DAW F + + DV+ W+ MI
Sbjct: 164 DAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRF 223
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESS 266
A G ++ + +F M R + P+ FT S+L+AS IE + +S+ IH +K GL +
Sbjct: 224 AQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQAS-ADIESLDLSKTIHGHALKAGLSTD 282
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
++ +L+ YAK G I + +L+ ++ + +S +I + + + + A LF +M+
Sbjct: 283 VFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGD-GERALSLFSNML 341
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
++ +V +L CA +A+L LG Q+H K D AVGNALIDMYAK G I
Sbjct: 342 RYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIK 401
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
DA FD + ++ +SW ++I GY+ HG G EAI+++ MK P+++TF+ +L ACS
Sbjct: 402 DARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACS 461
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
+TG EG + FT M Y I P EH++C+V L R G L+ A I + +P+ +W
Sbjct: 462 NTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIW 521
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
A+LGAC I+ + LG ++A+ + ++EP ++V+LSNIY A W N RK M+ +
Sbjct: 522 RALLGACVIHNDVELGRISAQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRK 581
Query: 567 SLRKNPGYSFLQS 579
++K PG S++++
Sbjct: 582 GVKKEPGLSWIEN 594
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/430 (28%), Positives = 214/430 (49%), Gaps = 3/430 (0%)
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD MPERN VS+ +I GYAQ+ A +F+ + G N F +++ L+ M W
Sbjct: 3 FDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEWA 62
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ GR++ G + K + N F+ +AL+D Y+ G + A +F+ I KD+VSW MI
Sbjct: 63 ELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASY 122
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A ++ F M G KP+ FT +L+A +G +H ++K E
Sbjct: 123 AENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDL 182
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ L+++Y + G A++ + M K D+I + +IS FA+ S++A ++F M
Sbjct: 183 YVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQ-SGQSEKALEIFCQMRR 241
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ + +L A++ SL+L + IH A K S D V NAL+ YAK G I
Sbjct: 242 AFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQ 301
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
+ F+ + D+N +SW ++I Y + G G A+ L+ M + +VT+ S+L AC+
Sbjct: 302 SMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACAT 361
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
G ++ + K + ++D++A+ G ++ A M ++++ S W+
Sbjct: 362 LAALELGLQVHC-LTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVS-WN 419
Query: 508 AILGACSIYG 517
AI+ S++G
Sbjct: 420 AIICGYSMHG 429
>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 674
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 189/534 (35%), Positives = 314/534 (58%), Gaps = 9/534 (1%)
Query: 51 LIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
+IH I+ + + + ++ ++ Y G V AR FD M R+V+SW MISGY +NG
Sbjct: 138 VIHGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVMKNRDVISWNTMISGYYRNG 197
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
Y +AL++F M+ GV + T S L C ++ L+ GR + +++ R + + VK+
Sbjct: 198 YMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVKN 257
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
AL+++Y KCG +++A +F R+ER+DV++W MI G G +++ L R M +G++P
Sbjct: 258 ALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDGDVENALELCRLMQFEGVRP 317
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
+ T+ S++ A ++L +H I+ + S + SLI +YAK I ++++
Sbjct: 318 NAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCFRVF 377
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
+ +A+I+G +++ ++A DLFK M + + + L +L A +A L
Sbjct: 378 SGASRNHTGPWSAIIAGCVQNE-LVRDALDLFKRMRREDVEPNIATLNSLLPAYATLADL 436
Query: 351 NLGRQIHAFAFK--YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK----NVISWT 404
IH + K + SS DAA G L+ +Y+K G + A++ F+ + +K +V+ W
Sbjct: 437 RQTMNIHCYLTKTGFMSSLDAATG--LVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWG 494
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK 464
+LI+GY HG GH A++++ +M G+ PN++TF S L ACSH+GL EG LF+ M+
Sbjct: 495 ALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFSFMLEH 554
Query: 465 YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGEL 524
Y+ L R+ H++C+VDL R G+L+ AYN+I + +PT+++W A+L AC + N LGE+
Sbjct: 555 YKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTIWGALLAACVTHENVQLGEM 614
Query: 525 AARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
AA LF++EPE + NYV+L+NIY A G W + K R +ME LRK PG+S ++
Sbjct: 615 AANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRNMMENVGLRKKPGHSTIE 668
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 132/498 (26%), Positives = 259/498 (52%), Gaps = 12/498 (2%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L Y SLL ++ + +H H+IT G S H+ + + + YA G + ARK
Sbjct: 13 LSVKQYQSLLNHYAATQSISKTKALHCHVITGGRVSG-HILSTLSVTYALCGHIAYARKL 71
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR--ANQFTYSSALRACARMR 145
FD MP+ +++S+ +I Y ++G +A+ VF M+ G++ + +TY +A ++
Sbjct: 72 FDEMPQSSLLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYPFVAKAAGELK 131
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
+ G +I G I + F + +V++ALL +Y G +E A +F+ ++ +DV+SWN MI
Sbjct: 132 SISLGLVIHGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVMKNRDVISWNTMIS 191
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGL 263
G G+ +D+ +F M+ +G+ PD T+ S+L + G+E+ + +H L+ + L
Sbjct: 192 GYYRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGR--NVHKLVEEKRL 249
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
++ +L+++Y K G + A ++ M + D+I+ T +I+G+ D + + A +L +
Sbjct: 250 GDKIEVKNALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDGD-VENALELCR 308
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
M + + + V + +++ C + LN G+ +H +A + + D + +LI MYAK
Sbjct: 309 LMQFEGVRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCK 368
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
I R F + W+++IAG ++ +A++L+K+M+ E + PN T SLL
Sbjct: 369 HIDLCFRVFSGASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRREDVEPNIATLNSLLP 428
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA---YNMIRQMNIK 500
A + + + + K + + + +V ++++ G LESA +N I++ +
Sbjct: 429 AYATLADLRQTMNIHC-YLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKS 487
Query: 501 PTASLWSAILGACSIYGN 518
LW A++ ++G+
Sbjct: 488 KDVVLWGALISGYGMHGD 505
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 210/611 (34%), Positives = 318/611 (52%), Gaps = 74/611 (12%)
Query: 47 RQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGY 106
RQAH AHI+ G ++ HL+TK++ YA A D +PE NV S++ +I +
Sbjct: 33 RQAH---AHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAF 89
Query: 107 AQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENL 166
++ +AL FS ML G+ + SA++ACA + L+ R + G F +
Sbjct: 90 SKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDS 149
Query: 167 FVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG--------------- 211
FV+S+L+ +Y KC I DA +F+R+ DVVSW+A++ A QG
Sbjct: 150 FVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDS 209
Query: 212 ---------------FNDDSFW-----LFRSMMRQGMKPDCFTLGSILRASVGGIE-LMK 250
FN + +F M +G +PD T+ S+L A VG +E L+
Sbjct: 210 GVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPA-VGDLEDLVM 268
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR 310
IH +IK GL S ++ +LID+Y K Q++ M D+ SC A I G +R
Sbjct: 269 GILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSR 328
Query: 311 D----------------------------------DNHSKEAFDLFKDMILKKMGIDDVI 336
+ + EA +LF++M + + + V
Sbjct: 329 NGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVT 388
Query: 337 LCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG 396
+ +L C N+A+L G+ H F+ + S D VG+ALIDMYAK G I + FD +
Sbjct: 389 IPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIP 448
Query: 397 DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWE 456
KN++ W ++IAGYA HG EA+E++ M+ G P+ ++F +L ACS +GLT EG
Sbjct: 449 TKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSY 508
Query: 457 LFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIY 516
F M +KY I R EH++C+V L +R G+LE AY MIR+M + P A +W A+L +C ++
Sbjct: 509 YFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVH 568
Query: 517 GNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSF 576
N SLGE+AA LF++EP NY++LSNIY + G W+ + R +M+ + LRKNPG S+
Sbjct: 569 NNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSW 628
Query: 577 LQSSKKNILLL 587
++ K +LL
Sbjct: 629 IEVKNKVHMLL 639
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 110/214 (51%), Gaps = 1/214 (0%)
Query: 248 LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG 307
L + Q H I+K GL + L L+ YA A + + + ++ S + LI
Sbjct: 29 LSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYA 88
Query: 308 FARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSY 367
F++ + A F M+ + + D+ +L + CA +++L RQ+H A
Sbjct: 89 FSKF-HQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDS 147
Query: 368 DAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMK 427
D+ V ++L+ MY K +I DA+R FD M + +V+SW++L+A YA+ G EA L+ +M
Sbjct: 148 DSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMG 207
Query: 428 HEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM 461
G+ PN +++ ++ +H+GL E +F DM
Sbjct: 208 DSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDM 241
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 6/170 (3%)
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWT 404
+ ASL+ RQ HA K D + L+ YA + ADA D + + NV S++
Sbjct: 24 STTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFS 83
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK 464
+LI ++K H A+ + +M G++P++ S + AC+ GL+ I
Sbjct: 84 TLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACA--GLSALKPARQVHGIAS 141
Query: 465 YRILPRAEHF--SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
++ F S +V ++ + Q+ A+ + +M +P WSA++ A
Sbjct: 142 VSGF-DSDSFVQSSLVHMYIKCNQIRDAHRVFDRM-FEPDVVSWSALVAA 189
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 193/576 (33%), Positives = 319/576 (55%), Gaps = 3/576 (0%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ G +K+A D L+PS T++S+L C +HA ++T G+ S+
Sbjct: 135 QVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFR 194
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ T ++ Y K G + AR+ FD + R+V ++ M+ GYA++G E A +F M + G
Sbjct: 195 IGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVG 254
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
++ N+ ++ S L C L G+ + V+++ V ++L+ +Y CG IE A
Sbjct: 255 LKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGAR 314
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+F+ ++ +DVVSW MI G A G +D+F LF +M +G++PD T I+ A
Sbjct: 315 RVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISA 374
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
L +IH + G + ++ +L+ +YAK G+I+ A Q++ +M + D++S +A+I
Sbjct: 375 NLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIG 434
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
+ ++ + EAF+ F M + D V +LN C ++ +L++G +I+ A K
Sbjct: 435 AYV-ENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLV 493
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
+GNALI M AK G + A FD M ++VI+W ++I GY+ HG EA+ L+ +M
Sbjct: 494 SHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRM 553
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
E PN VTF+ +L ACS G EG FT ++ I+P + + C+VDL R G+
Sbjct: 554 LKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGE 613
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
L+ A +I+ M +KPT+S+WS++L AC I+GN + E AA ++P YV LS++
Sbjct: 614 LDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHM 673
Query: 547 YTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
Y AAG W+N K RK+ME R +RK G ++++ + K
Sbjct: 674 YAAAGMWENVAKVRKVMESRGIRKEQGCTWIEVAGK 709
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 169/536 (31%), Positives = 281/536 (52%), Gaps = 12/536 (2%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D TY+ L Q C + + + HII G + N++ +I Y+ G+V AR+
Sbjct: 55 IDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQI 114
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD + + VV+W A+I+GYAQ G+ + A +F M+ G+ + T+ S L AC+ L
Sbjct: 115 FDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGL 174
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ + + FV + + +AL+ +Y K G ++DA +F+ + +DV ++N M+GG
Sbjct: 175 NWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGY 234
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A G + +F LF M + G+KP+ + SIL L +H + GL
Sbjct: 235 AKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDI 294
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
++ SLI +Y GSI A +++ +M D++S T +I G+A + N ++AF LF M
Sbjct: 295 RVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGN-IEDAFGLFATMQE 353
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ + D + ++N CA A+LN R+IH+ D V AL+ MYAK G I D
Sbjct: 354 EGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKD 413
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A + FD M ++V+SW+++I Y ++GYG EA E + MK + P+ VT+++LL AC H
Sbjct: 414 ARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGH 473
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
G G E++T I K ++ + ++ + A+ G +E A + M ++ W+
Sbjct: 474 LGALDVGMEIYTQAI-KADLVSHVPLGNALIIMNAKHGSVERARYIFDTM-VRRDVITWN 531
Query: 508 AILGACSIYGNTSLGELAARNLFD-MEPEK----SVNYVVLSNIYTAAGAWDNARK 558
A++G S++GN A LFD M E+ SV +V + + + AG D R+
Sbjct: 532 AMIGGYSLHGNAR----EALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRR 583
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/450 (27%), Positives = 218/450 (48%), Gaps = 28/450 (6%)
Query: 118 VFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYA 177
V + G + TY + C +R G+ ++ I +G N++ + L+ LY+
Sbjct: 44 VLQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYS 103
Query: 178 KCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGS 237
CG + +A +F+ +E K VV+WNA+I G A G ++F LFR M+ +G++P T S
Sbjct: 104 ICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLS 163
Query: 238 ILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
+L A L ++H ++ G S ++ +L+ +Y K GS+ A Q++ + D
Sbjct: 164 VLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRD 223
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
+ + ++ G+A+ + K AF+LF M + + + +L+ C +L G+ +H
Sbjct: 224 VSTFNVMVGGYAKSGDWEK-AFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVH 282
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
A D V +LI MY G I A R FD M ++V+SWT +I GYA++G
Sbjct: 283 AQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIE 342
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACS-----------HTGLTCEGWELFTDMINKYR 466
+A L+ M+ EG+ P+ +T++ ++ AC+ H+ + G+ TD++
Sbjct: 343 DAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFG--TDLLVS-- 398
Query: 467 ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGAC--SIYGNTSLGEL 524
+ +V ++A+ G ++ A + M + S WSA++GA + YG +
Sbjct: 399 --------TALVHMYAKCGAIKDARQVFDAMPRRDVVS-WSAMIGAYVENGYGTEAFETF 449
Query: 525 AARNLFDMEPEKSVNYVVLSNIYTAAGAWD 554
++EP+ V Y+ L N GA D
Sbjct: 450 HLMKRSNIEPD-GVTYINLLNACGHLGALD 478
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 201/559 (35%), Positives = 310/559 (55%), Gaps = 4/559 (0%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L D + ++Q K R+ +HA +I GY L+ ++ Y+K G++ A K
Sbjct: 2 LRDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALK 61
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FD MP+RN+VSWTAMISG +QN A+ F M G QF +SSA+RACA +
Sbjct: 62 LFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGS 121
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
++ G+ + K LFV S L D+Y+KCG + DA +FE + KD VSW AMI G
Sbjct: 122 IEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDG 181
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLES 265
+ G +++ F+ M+ + + D L S L A G ++ K + +H ++KLG ES
Sbjct: 182 YSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGA-CGALKACKFGRSVHSSVVKLGFES 240
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT-DIISCTALISGFARDDNHSKEAFDLFKD 324
+ +L D+Y+K G + SA ++ + +++S T LI G+ + K +F +
Sbjct: 241 DIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEK-GLSVFVE 299
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
+ + + ++ ++ CAN A+L G Q+HA K D V + L+DMY K G
Sbjct: 300 LRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGL 359
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ A +AFDE+GD I+W SL++ + +HG G +AI+ +++M G+ PN +TF+SLL
Sbjct: 360 LEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTG 419
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
CSH GL EG + F M Y ++P EH+SCV+DL R G+L+ A I +M +P A
Sbjct: 420 CSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAF 479
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
W + LGAC I+G+ +G+LAA L +EP+ S V+LSNIY W++ R R M
Sbjct: 480 GWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMR 539
Query: 565 ERSLRKNPGYSFLQSSKKN 583
+ +++K PGYS++ K
Sbjct: 540 DGNVKKLPGYSWVDVGYKT 558
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 133/271 (49%), Gaps = 2/271 (0%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
+ +D S L C KA + +H+ ++ G+ES++ + + Y+K GD+ SA
Sbjct: 202 EVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESA 261
Query: 85 RKAFDRMPE-RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
F E RNVVS+T +I GY + E L VF + R G+ N+FT+SS ++ACA
Sbjct: 262 SNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACAN 321
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
L+ G + + K F E+ FV S L+D+Y KCG +E A F+ I ++WN++
Sbjct: 322 QAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSL 381
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLG 262
+ G D+ F M+ +G+KP+ T S+L S G+ + + + G
Sbjct: 382 VSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYG 441
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ + +ID+ + G ++ A + M
Sbjct: 442 VVPGEEHYSCVIDLLGRAGRLKEAKEFINRM 472
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 173/367 (47%), Gaps = 42/367 (11%)
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
M D L +++ L + Q+H L+I G LT L+++Y+K G + A
Sbjct: 1 MLRDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHAL 60
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
+L+ +M + +++S TA+ISG +++ S EA F M + + CA++
Sbjct: 61 KLFDTMPQRNLVSWTAMISGLSQNSKFS-EAIRTFCGMRICGEVPTQFAFSSAIRACASL 119
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI 407
S+ +G+Q+H A K+ + VG+ L DMY+K G + DA + F+EM K+ +SWT++I
Sbjct: 120 GSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMI 179
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS-----------HTGLTCEGWE 456
GY+K G EA+ +KKM E + + S L AC H+ + G+E
Sbjct: 180 DGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFE 239
Query: 457 -------LFTDMINKYRILPRAEH-------------FSCVVDLFARRGQLE---SAYNM 493
TDM +K + A + ++C++D + Q+E S +
Sbjct: 240 SDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVE 299
Query: 494 IRQMNIKPTASLWSAILGAC----SIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTA 549
+R+ I+P +S+++ AC ++ T L + FD +P S +L ++Y
Sbjct: 300 LRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS---SILVDMYGK 356
Query: 550 AGAWDNA 556
G ++A
Sbjct: 357 CGLLEHA 363
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 360 bits (925), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 191/556 (34%), Positives = 325/556 (58%), Gaps = 7/556 (1%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGY-ESNLHLSTKVIIFYAK-VGDVLSARKAFDR 90
+ ++++ C + +I+ ++ GY E+++ + ++I + K GD+ SA K FD+
Sbjct: 131 FAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDK 190
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
MPERN+V+WT MI+ +AQ G +A+ +F M SG ++FTYSS L AC + L G
Sbjct: 191 MPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALG 250
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKC---GWIEDAWILFERIERKDVVSWNAMIGGL 207
+ + + + ++ V +L+D+YAKC G ++D+ +FE++ +V+SW A+I
Sbjct: 251 KQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAY 310
Query: 208 AMQGFND-DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
G D ++ LF M+ ++P+ F+ S+L+A + Q++ +KLG+ S
Sbjct: 311 VQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASV 370
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
N + SLI +YA+ G + A + + + + +++S A++ G+A++ S+EAF LF ++
Sbjct: 371 NCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLK-SEEAFLLFNEIA 429
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+GI +L+ A++ ++ G QIH K + + NALI MY++ G I
Sbjct: 430 DTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIE 489
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A + F+EM D+NVISWTS+I G+AKHG+ A+E++ KM G PN++T++++L ACS
Sbjct: 490 AAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACS 549
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
H G+ EG + F M ++ I+PR EH++C+VDL R G L A I M + A +W
Sbjct: 550 HVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVW 609
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
+LGAC ++GNT LG AA + + EP+ Y++LSN++ +AG W + K RK M+ER
Sbjct: 610 RTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKER 669
Query: 567 SLRKNPGYSFLQSSKK 582
+L K G S+++ +
Sbjct: 670 NLIKEAGCSWIEVENR 685
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 147/493 (29%), Positives = 267/493 (54%), Gaps = 15/493 (3%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D +TY LL+ CI + + L+H ++ +G E + + +I Y+K GD +AR F
Sbjct: 25 DLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIF 84
Query: 89 DRMP-ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
+ M +R++VSW+AM+S +A N + A+ F ML G N++ +++ +RAC+ +
Sbjct: 85 EGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYA 144
Query: 148 QGGRMIQGSIQKGRFVE-NLFVKSALLDLYAK-CGWIEDAWILFERIERKDVVSWNAMIG 205
G +I G + K ++E ++ V L+D++ K G + A+ +F+++ +++V+W MI
Sbjct: 145 WVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMIT 204
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGL 263
A G D+ LF M G PD FT S+L A +G + L K Q+H +I+LGL
Sbjct: 205 RFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGK--QLHSRVIRLGL 262
Query: 264 ESSNKLTGSLIDVYAKY---GSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFD 320
+ SL+D+YAK GS+ + +++ M + +++S TA+I+ + + KEA +
Sbjct: 263 ALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIE 322
Query: 321 LFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYA 380
LF MI + + +L C N++ G Q++++A K + VGN+LI MYA
Sbjct: 323 LFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYA 382
Query: 381 KSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
+SG + DA +AFD + +KN++S+ +++ GYAK+ EA L+ ++ G+ + TF S
Sbjct: 383 RSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFAS 442
Query: 441 LLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSC--VVDLFARRGQLESAYNMIRQMN 498
LL + G +G ++ ++ ++ C ++ +++R G +E+A+ + +M
Sbjct: 443 LLSGAASIGAMGKGEQIHGRLLKGGY---KSNQCICNALISMYSRCGNIEAAFQVFNEME 499
Query: 499 IKPTASLWSAILG 511
+ S S I G
Sbjct: 500 DRNVISWTSMITG 512
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 201/392 (51%), Gaps = 17/392 (4%)
Query: 110 GYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK 169
G +A M + + TYS L++C R R Q G+++ + + + V
Sbjct: 5 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 64
Query: 170 SALLDLYAKCGWIEDAWILFERI-ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGM 228
+ L+ LY+KCG E A ++FE + ++D+VSW+AM+ A + W F M+ G
Sbjct: 65 NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 124
Query: 229 KPDCFTLGSILRASVGGIELMKISQIHDLIIKLG-LESSNKLTGSLIDVYAK-YGSIRSA 286
P+ + +++RA I+ ++K G LE+ + LID++ K G + SA
Sbjct: 125 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 184
Query: 287 YQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICAN 346
Y+++ M + ++++ T +I+ FA+ +++A DLF DM L D +L+ C
Sbjct: 185 YKVFDKMPERNLVTWTLMITRFAQ-LGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 243
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK---SGEIADANRAFDEMGDKNVISW 403
+ L LG+Q+H+ + + D VG +L+DMYAK G + D+ + F++M + NV+SW
Sbjct: 244 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 303
Query: 404 TSLIAGYAKHGY-GHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI 462
T++I Y + G EAIEL+ KM + PN +F S+L AC + G ++++
Sbjct: 304 TAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS--- 360
Query: 463 NKYRILPRAEHFSCV----VDLFARRGQLESA 490
Y + +CV + ++AR G++E A
Sbjct: 361 --YAVKLGIASVNCVGNSLISMYARSGRMEDA 390
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 206/451 (45%), Gaps = 54/451 (11%)
Query: 3 IVRANFKTGQL-KQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITN 59
I+ A ++G+ K+A++ + P+ ++ S+L+ C + ++++ +
Sbjct: 306 IITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKL 365
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G S + +I YA+ G + ARKAFD + E+N+VS+ A++ GYA+N E A L+F
Sbjct: 366 GIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF 425
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
+ + +G+ + FT++S L A + + G I G + KG + N + +AL+ +Y++C
Sbjct: 426 NEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRC 485
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G IE A+ +F +E ++V+SW +MI G A GF + +F M+ G KP+ T ++L
Sbjct: 486 GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVL 545
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
A H +I G + N + Y ++G I + Y M+ D++
Sbjct: 546 SACS-----------HVGMISEGQKHFNSM-------YKEHG-IVPRMEHYACMV--DLL 584
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
+ L+ EA + M L D ++ +L C + LGR
Sbjct: 585 GRSGLLV----------EAMEFINSMPLMA---DALVWRTLLGACRVHGNTELGRHAAEM 631
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVI-----SWTSL-------I 407
+ Q D A L +++A +G+ D + M ++N+I SW +
Sbjct: 632 ILE-QEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFH 690
Query: 408 AGYAKHGYG----HEAIELYKKMKHEGMVPN 434
G H E +L K+K G +P+
Sbjct: 691 VGETSHPQAWQIYQELDQLASKIKEMGYIPD 721
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 191/556 (34%), Positives = 325/556 (58%), Gaps = 7/556 (1%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGY-ESNLHLSTKVIIFYAK-VGDVLSARKAFDR 90
+ ++++ C + +I+ ++ GY E+++ + ++I + K GD+ SA K FD+
Sbjct: 149 FAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDK 208
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
MPERN+V+WT MI+ +AQ G +A+ +F M SG ++FTYSS L AC + L G
Sbjct: 209 MPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALG 268
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKC---GWIEDAWILFERIERKDVVSWNAMIGGL 207
+ + + + ++ V +L+D+YAKC G ++D+ +FE++ +V+SW A+I
Sbjct: 269 KQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAY 328
Query: 208 AMQGFND-DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
G D ++ LF M+ ++P+ F+ S+L+A + Q++ +KLG+ S
Sbjct: 329 VQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASV 388
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
N + SLI +YA+ G + A + + + + +++S A++ G+A++ S+EAF LF ++
Sbjct: 389 NCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLK-SEEAFLLFNEIA 447
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+GI +L+ A++ ++ G QIH K + + NALI MY++ G I
Sbjct: 448 DTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIE 507
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A + F+EM D+NVISWTS+I G+AKHG+ A+E++ KM G PN++T++++L ACS
Sbjct: 508 AAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACS 567
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
H G+ EG + F M ++ I+PR EH++C+VDL R G L A I M + A +W
Sbjct: 568 HVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVW 627
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
+LGAC ++GNT LG AA + + EP+ Y++LSN++ +AG W + K RK M+ER
Sbjct: 628 RTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKER 687
Query: 567 SLRKNPGYSFLQSSKK 582
+L K G S+++ +
Sbjct: 688 NLIKEAGCSWIEVENR 703
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 147/493 (29%), Positives = 267/493 (54%), Gaps = 15/493 (3%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D +TY LL+ CI + + L+H ++ +G E + + +I Y+K GD +AR F
Sbjct: 43 DLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIF 102
Query: 89 DRMP-ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
+ M +R++VSW+AM+S +A N + A+ F ML G N++ +++ +RAC+ +
Sbjct: 103 EGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYA 162
Query: 148 QGGRMIQGSIQKGRFVE-NLFVKSALLDLYAK-CGWIEDAWILFERIERKDVVSWNAMIG 205
G +I G + K ++E ++ V L+D++ K G + A+ +F+++ +++V+W MI
Sbjct: 163 WVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMIT 222
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGL 263
A G D+ LF M G PD FT S+L A +G + L K Q+H +I+LGL
Sbjct: 223 RFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGK--QLHSRVIRLGL 280
Query: 264 ESSNKLTGSLIDVYAKY---GSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFD 320
+ SL+D+YAK GS+ + +++ M + +++S TA+I+ + + KEA +
Sbjct: 281 ALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIE 340
Query: 321 LFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYA 380
LF MI + + +L C N++ G Q++++A K + VGN+LI MYA
Sbjct: 341 LFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYA 400
Query: 381 KSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
+SG + DA +AFD + +KN++S+ +++ GYAK+ EA L+ ++ G+ + TF S
Sbjct: 401 RSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFAS 460
Query: 441 LLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSC--VVDLFARRGQLESAYNMIRQMN 498
LL + G +G ++ ++ ++ C ++ +++R G +E+A+ + +M
Sbjct: 461 LLSGAASIGAMGKGEQIHGRLLKGGY---KSNQCICNALISMYSRCGNIEAAFQVFNEME 517
Query: 499 IKPTASLWSAILG 511
+ S S I G
Sbjct: 518 DRNVISWTSMITG 530
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 201/392 (51%), Gaps = 17/392 (4%)
Query: 110 GYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK 169
G +A M + + TYS L++C R R Q G+++ + + + V
Sbjct: 23 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 82
Query: 170 SALLDLYAKCGWIEDAWILFERI-ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGM 228
+ L+ LY+KCG E A ++FE + ++D+VSW+AM+ A + W F M+ G
Sbjct: 83 NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 142
Query: 229 KPDCFTLGSILRASVGGIELMKISQIHDLIIKLG-LESSNKLTGSLIDVYAK-YGSIRSA 286
P+ + +++RA I+ ++K G LE+ + LID++ K G + SA
Sbjct: 143 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 202
Query: 287 YQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICAN 346
Y+++ M + ++++ T +I+ FA+ +++A DLF DM L D +L+ C
Sbjct: 203 YKVFDKMPERNLVTWTLMITRFAQ-LGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 261
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK---SGEIADANRAFDEMGDKNVISW 403
+ L LG+Q+H+ + + D VG +L+DMYAK G + D+ + F++M + NV+SW
Sbjct: 262 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 321
Query: 404 TSLIAGYAKHGY-GHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI 462
T++I Y + G EAIEL+ KM + PN +F S+L AC + G ++++
Sbjct: 322 TAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS--- 378
Query: 463 NKYRILPRAEHFSCV----VDLFARRGQLESA 490
Y + +CV + ++AR G++E A
Sbjct: 379 --YAVKLGIASVNCVGNSLISMYARSGRMEDA 408
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 206/451 (45%), Gaps = 54/451 (11%)
Query: 3 IVRANFKTGQL-KQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITN 59
I+ A ++G+ K+A++ + P+ ++ S+L+ C + ++++ +
Sbjct: 324 IITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKL 383
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G S + +I YA+ G + ARKAFD + E+N+VS+ A++ GYA+N E A L+F
Sbjct: 384 GIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF 443
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
+ + +G+ + FT++S L A + + G I G + KG + N + +AL+ +Y++C
Sbjct: 444 NEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRC 503
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G IE A+ +F +E ++V+SW +MI G A GF + +F M+ G KP+ T ++L
Sbjct: 504 GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVL 563
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
A H +I G + N + Y ++G I + Y M+ D++
Sbjct: 564 SACS-----------HVGMISEGQKHFNSM-------YKEHG-IVPRMEHYACMV--DLL 602
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
+ L+ EA + M L D ++ +L C + LGR
Sbjct: 603 GRSGLLV----------EAMEFINSMPLMA---DALVWRTLLGACRVHGNTELGRHAAEM 649
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVI-----SWTSL-------I 407
+ Q D A L +++A +G+ D + M ++N+I SW +
Sbjct: 650 ILE-QEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFH 708
Query: 408 AGYAKHGYG----HEAIELYKKMKHEGMVPN 434
G H E +L K+K G +P+
Sbjct: 709 VGETSHPQAWQIYQELDQLASKIKEMGYIPD 739
>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
Length = 1161
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 194/523 (37%), Positives = 307/523 (58%), Gaps = 5/523 (0%)
Query: 64 NLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML 123
NL S +I Y K + L A K FD MPERNVVSW+A++SG+ NG + +L +FS M
Sbjct: 411 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 470
Query: 124 RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIE 183
R G+ N+FT+S+ L+AC + L+ G I G K F + V ++L+D+Y+KCG I
Sbjct: 471 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 530
Query: 184 DAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK--PDCFTLGSILRA 241
+A +F RI + ++SWNAMI G G+ + F M +K PD FTL S+L+A
Sbjct: 531 EAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKA 590
Query: 242 SVGGIELMKISQIHDLIIKLGLE--SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
+ QIH +++ G SS +TGSL+D+Y K G + SA + + + + +I
Sbjct: 591 CSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMI 650
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
S ++LI G+A++ EA LFK + ID L ++ + A+ A L G+Q+ A
Sbjct: 651 SWSSLILGYAQEGEFV-EAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQAL 709
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
A K S + +V N+++DMY K G + +A + F EM K+VISWT +I GY KHG G ++
Sbjct: 710 AVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKS 769
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD 479
+ ++ +M + P++V +L++L ACSH+G+ EG ELF+ ++ + I PR EH++CVVD
Sbjct: 770 VRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVD 829
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVN 539
L R G+L+ A ++I M IKP +W +L C ++G+ LG+ + L ++ + N
Sbjct: 830 LLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPAN 889
Query: 540 YVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
YV++SN+Y AG W+ R+L + L+K G S+++ ++
Sbjct: 890 YVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIERE 932
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 206/407 (50%), Gaps = 23/407 (5%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ + L+ C A + IH + G+E + + ++ Y+K G + A K F R+
Sbjct: 480 TFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI 539
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV--RANQFTYSSALRACARMRWLQG 149
+R+++SW AMI+G+ GY AL F M + + R ++FT +S L+AC+ +
Sbjct: 540 VDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYA 599
Query: 150 GRMIQGSIQKGRF--VENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ I G + + F + + +L+DLY KCG++ A F++I+ K ++SW+++I G
Sbjct: 600 GKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGY 659
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKL--GLES 265
A +G ++ LF+ + + D F L SI+ L + Q+ L +KL GLE+
Sbjct: 660 AQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLET 719
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
S + S++D+Y K G + A + + M D+IS T +I+G+ + K++ +F +M
Sbjct: 720 S--VLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGK-HGLGKKSVRIFYEM 776
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQ-----IHAFAFKYQSSYDAAVGNALIDMYA 380
+ + D+V +L+ C++ + G + + K + + A V +D+
Sbjct: 777 LRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACV----VDLLG 832
Query: 381 KSGEIADANRAFDEMGDK-NVISWTSLIAGYAKHGYGHEAIELYKKM 426
++G + +A D M K NV W +L++ HG IEL K++
Sbjct: 833 RAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHG----DIELGKEV 875
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 11/272 (4%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYE--SNLHLSTKVIIFYAKVGDVLSARK 86
D T SLL+ C IH ++ +G+ S+ ++ ++ Y K G + SARK
Sbjct: 580 DEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARK 639
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
AFD++ E+ ++SW+++I GYAQ G A+ +F + + + F SS + A
Sbjct: 640 AFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFAL 699
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
L+ G+ +Q K V ++++D+Y KCG +++A F ++ KDV+SW +I G
Sbjct: 700 LRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITG 759
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKL---- 261
G S +F M+R ++PD ++L A S G+ I + +L KL
Sbjct: 760 YGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGM----IKEGEELFSKLLETH 815
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
G++ + ++D+ + G ++ A L +M
Sbjct: 816 GIKPRVEHYACVVDLLGRAGRLKEAKHLIDTM 847
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 195/537 (36%), Positives = 308/537 (57%), Gaps = 7/537 (1%)
Query: 52 IHAHIITNGY-ESNLHLSTKVIIFYAK-VGDVLSARKAFDRMPERNVVSWTAMISGYAQN 109
I ++ GY +S++ + +I + K GD++SA K F++MPERN V+WT MI+ Q
Sbjct: 190 IFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQF 249
Query: 110 GYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK 169
GY A+ +F M+ SG ++FT S + ACA M L G+ + + + V
Sbjct: 250 GYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVG 309
Query: 170 SALLDLYAKC---GWIEDAWILFERIERKDVVSWNAMIGGLAMQG-FNDDSFWLFRSMMR 225
L+++YAKC G + A +F++I +V SW AMI G +G +++++ LFR M+
Sbjct: 310 CCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMIL 369
Query: 226 QGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRS 285
+ P+ FT S L+A L Q+ +KLG S N + SLI +YA+ G I
Sbjct: 370 THVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDD 429
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
A + + + + ++IS +I +A++ N S+EA +LF ++ + MG +L+ A
Sbjct: 430 ARKAFDILFEKNLISYNTVIDAYAKNLN-SEEALELFNEIEDQGMGASAFTFASLLSGAA 488
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
++ ++ G QIHA K + +V NALI MY++ G I A + F++M D+NVISWTS
Sbjct: 489 SIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTS 548
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
+I G+AKHG+ +A+EL+ KM EG+ PN VT++++L ACSH GL EGW+ F M ++
Sbjct: 549 IITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEH 608
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
++PR EH++C+VD+ R G L A I M K A +W LGAC ++GN LG+ A
Sbjct: 609 GVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHA 668
Query: 526 ARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
A+ + + EP Y++LSN+Y + WD RK M+E++L K G S+++ K
Sbjct: 669 AKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENK 725
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 149/495 (30%), Positives = 265/495 (53%), Gaps = 8/495 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY L+ CI ++ L+H + + + + +I Y+K G A F
Sbjct: 65 DLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIF 124
Query: 89 DRM-PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
M R+++SW+AM+S +A N ALL F M+ +G N++ +++A RAC+ ++
Sbjct: 125 QLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFV 184
Query: 148 QGGRMIQGSIQKGRFVE-NLFVKSALLDLYAKC-GWIEDAWILFERIERKDVVSWNAMIG 205
G I G + K +++ ++ V L+D++ K G + A+ +FE++ ++ V+W MI
Sbjct: 185 SVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMIT 244
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
L G+ ++ LF M+ G +PD FTL ++ A L+ Q+H I+ GL
Sbjct: 245 RLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTL 304
Query: 266 SNKLTGSLIDVYAKY---GSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
+ LI++YAK GS+ +A +++ +L ++ S TA+I+G+ + + +EA DLF
Sbjct: 305 DRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLF 364
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
+ MIL + + L CAN+A+L +G Q+ A K S V N+LI MYA+S
Sbjct: 365 RGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARS 424
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
G I DA +AFD + +KN+IS+ ++I YAK+ EA+EL+ +++ +GM + TF SLL
Sbjct: 425 GRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLL 484
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
+ G +G ++ +I L ++ + ++ +++R G +ESA+ + M +
Sbjct: 485 SGAASIGTIGKGEQIHARVIKSGLKLNQSV-CNALISMYSRCGNIESAFQVFEDMEDRNV 543
Query: 503 ASLWSAILGACSIYG 517
S W++I+ + +G
Sbjct: 544 IS-WTSIITGFAKHG 557
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 197/393 (50%), Gaps = 17/393 (4%)
Query: 109 NGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFV 168
NG A+ M+ G + TYS L+ C R R G ++ + + +
Sbjct: 44 NGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVT 103
Query: 169 KSALLDLYAKCGWIEDAWILFERI-ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
++L+ LY+KCG E A +F+ + +D++SW+AM+ A + F M+ G
Sbjct: 104 LNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENG 163
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG-SLIDVYAK-YGSIRS 285
P+ + + RA + I ++K G S+ G LID++ K G + S
Sbjct: 164 YYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVS 223
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
A++++ M + + ++ T +I+ + ++ EA DLF +MIL D L +++ CA
Sbjct: 224 AFKVFEKMPERNAVTWTLMITRLMQ-FGYAGEAIDLFLEMILSGYEPDRFTLSGVISACA 282
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK---SGEIADANRAFDEMGDKNVIS 402
N+ L LG+Q+H+ A ++ + D VG LI+MYAK G + A + FD++ D NV S
Sbjct: 283 NMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFS 342
Query: 403 WTSLIAGYA-KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM 461
WT++I GY K GY EA++L++ M ++PN TF S L AC++ G ++FT
Sbjct: 343 WTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFT-- 400
Query: 462 INKYRILPRAEHFSCV----VDLFARRGQLESA 490
+ + +CV + ++AR G+++ A
Sbjct: 401 ---HAVKLGFSSVNCVANSLISMYARSGRIDDA 430
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 138/263 (52%), Gaps = 1/263 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ S L+ C + A R + H + G+ S ++ +I YA+ G + ARKAFD +
Sbjct: 378 TFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDIL 437
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
E+N++S+ +I YA+N E AL +F+ + G+ A+ FT++S L A + + G
Sbjct: 438 FEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGE 497
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I + K N V +AL+ +Y++CG IE A+ +FE +E ++V+SW ++I G A G
Sbjct: 498 QIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHG 557
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLT 270
F + LF M+ +G++P+ T ++L A S G+ + + G+ +
Sbjct: 558 FATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHY 617
Query: 271 GSLIDVYAKYGSIRSAYQLYRSM 293
++D+ + GS+ A Q SM
Sbjct: 618 ACMVDILGRSGSLSEAIQFINSM 640
>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
Length = 1134
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 193/523 (36%), Positives = 306/523 (58%), Gaps = 5/523 (0%)
Query: 64 NLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML 123
NL S +I Y K + L A K FD MPERNVVSWTA++SG+ NG +L +F+ M
Sbjct: 403 NLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMG 462
Query: 124 RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIE 183
R G+ N+FT+S+ L+AC + L+ G I G K F + V ++L+D+Y+KCG I
Sbjct: 463 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 522
Query: 184 DAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK--PDCFTLGSILRA 241
+A +F + + ++SWNAMI G G+ + F M +K PD FTL S+L+A
Sbjct: 523 EAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKA 582
Query: 242 SVGGIELMKISQIHDLIIKLGLE--SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
+ QIH +++ G SS +TGSL+D+Y K G++ SA + + + + +I
Sbjct: 583 CSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMI 642
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
S ++LI G+A++ + EA LFK + ID +L ++ + A+ A L G+Q+ A
Sbjct: 643 SWSSLILGYAQEGDFV-EAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQAL 701
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
K S + +V N+L+DMY K G + +A + F EM K+VISWT +I GY KHG G +A
Sbjct: 702 VVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKA 761
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD 479
+ ++ KM + P++V +L++L ACSH+G+ EG ELF+ ++ I PR EH++CVVD
Sbjct: 762 VSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVD 821
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVN 539
L R G+L+ A +++ M IKP +W +L C ++G+ LG+ + L ++ + N
Sbjct: 822 LLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDGKNPAN 881
Query: 540 YVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
YV++SN+Y AG W+ R+L + L+K G S+++ ++
Sbjct: 882 YVMMSNLYGQAGYWNEQGNARELGSIKGLQKEAGMSWVEIERE 924
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 213/426 (50%), Gaps = 20/426 (4%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ + L+ C A + IH + G+E + + ++ Y+K G + A K F M
Sbjct: 472 TFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRWM 531
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV--RANQFTYSSALRACARMRWLQG 149
R+++SW AMI+GY GY AL F M + + R ++FT +S L+AC+ +
Sbjct: 532 VGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSSTGMIYA 591
Query: 150 GRMIQGSIQKGRF--VENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ I G + + F + + +L+DLY KCG + A F++I+ K ++SW+++I G
Sbjct: 592 GKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLILGY 651
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKL--GLES 265
A +G ++ LF+ + + D F L SI+ L + Q+ L++KL GLE+
Sbjct: 652 AQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLET 711
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
S ++ SL+D+Y K G + A + + M D+IS T +I+G+ + K+A +F M
Sbjct: 712 S--VSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGK-HGLGKKAVSIFNKM 768
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNA-LIDMYAKSGE 384
+ + D+V +L+ C++ + G ++ + + Q A ++D+ ++G
Sbjct: 769 LRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRAGR 828
Query: 385 IADANRAFDEMGDK-NVISWTSLIAGYAKHGYGHEAIELYKK-----MKHEGMVPNDVTF 438
+ +A D M K NV W +L++ HG IEL K+ ++ +G P +
Sbjct: 829 LKEAKHLVDTMPIKPNVGIWQTLLSLCRVHG----DIELGKEVGKILLRIDGKNPANYVM 884
Query: 439 LSLLFA 444
+S L+
Sbjct: 885 MSNLYG 890
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 190/554 (34%), Positives = 313/554 (56%), Gaps = 2/554 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ +L+ R+ +H +++ G+ S + +I Y K G+V SAR F
Sbjct: 157 DSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILF 216
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D + +R+VVSW +MISG NG+ N L F ML GV + T + L ACA + L
Sbjct: 217 DELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLT 276
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
GR + K F + + LLD+Y+KCG + A +F ++ +VSW ++I
Sbjct: 277 LGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHV 336
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
+G + ++ LF M +G++PD + + S++ A L K ++H+ I K + S+
Sbjct: 337 REGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLP 396
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
++ +L+++YAK GS+ A ++ + +I+S +I G++++ + EA LF DM K
Sbjct: 397 VSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQN-SLPNEALQLFLDM-QK 454
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
++ DDV + +L CA +A+L GR+IH + D V AL+DMY K G + A
Sbjct: 455 QLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLA 514
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ FD + K++I WT +IAGY HG+G EAI ++KM+ G+ P + +F S+L+AC+H+
Sbjct: 515 QQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHS 574
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
GL EGW+LF M ++ I P+ EH++C+VDL R G L AY I M IKP A++W A
Sbjct: 575 GLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGA 634
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L C I+ + L E A ++F++EPE + YV+L+N+Y A W+ +K ++ + + L
Sbjct: 635 LLSGCRIHHDVELAEKVAEHIFELEPENTRYYVLLANVYAEAEKWEEVKKIQRRISKGGL 694
Query: 569 RKNPGYSFLQSSKK 582
+ + G S+++ K
Sbjct: 695 KNDQGCSWIEVQGK 708
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 154/534 (28%), Positives = 278/534 (52%), Gaps = 12/534 (2%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLS 68
+ G L+ A+K + L+ +TY S+LQ C + K+ +H+ I +NG + L
Sbjct: 36 EMGDLRNAMKLLSRSQRSELELNTYCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLG 95
Query: 69 TKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR 128
K++ Y GD++ R+ FD + + W ++S YA+ G ++ +F M G+R
Sbjct: 96 AKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIR 155
Query: 129 ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWIL 188
+ +T++ L+ A ++ + + G + K F V ++L+ Y KCG +E A IL
Sbjct: 156 GDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARIL 215
Query: 189 FERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGI 246
F+ + +DVVSWN+MI G M GF+ + F M+ G+ D TL ++L A+VG +
Sbjct: 216 FDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNL 275
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
L + +H +K G +L+D+Y+K G++ A +++ M +T I+S T++I+
Sbjct: 276 TLGR--ALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIA 333
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
R+ H EA LF +M K + D + +++ CA SL+ GR++H K
Sbjct: 334 AHVREGLHY-EAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMG 392
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
+ V NAL++MYAK G + +AN F ++ KN++SW ++I GY+++ +EA++L+ M
Sbjct: 393 SNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDM 452
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSC-VVDLFARRG 485
+ + + P+DVT +L AC+ +G E+ ++ K H +C +VD++ + G
Sbjct: 453 QKQ-LKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYF--SDLHVACALVDMYVKCG 509
Query: 486 QLESAYNMIRQMNIKPTASLWSAILGACSI--YGNTSLGELAARNLFDMEPEKS 537
L A + M K LW+ ++ + +G ++ + +EPE+S
Sbjct: 510 LLVLAQQLF-DMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEES 562
>gi|449439011|ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 787
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 188/534 (35%), Positives = 307/534 (57%), Gaps = 3/534 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ +++ C LIH + +G+ SN+ + ++ Y G V AR+ F
Sbjct: 183 DKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVF 242
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ M +R+VVSW MISG+ QNG E AL VF++M+ + V + T SAL +C ++ L+
Sbjct: 243 NVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLKELE 302
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G + +QK E + V++AL+D+Y++CG +++A ++F + KDV++W +MI G
Sbjct: 303 LGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAETKEKDVITWTSMINGYI 362
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
M G + L +M G+ P+ TL S+L A L + +H +++ L+S
Sbjct: 363 MNGNAKSALALCPAMQLDGVVPNAVTLASLLSACASLCCLKQGKSLHAWVMRKKLDSDVL 422
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +LID+YAK ++ ++Q++ + AL+SG ++ ++EA LFK M+++
Sbjct: 423 VVTALIDMYAKCNAVSYSFQVFAKTSMKRTVPWNALLSGLIHNE-LAREAVGLFKSMLIE 481
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
++ + ++ A +A L +H++ + AV LIDMY+K G + A
Sbjct: 482 EVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYA 541
Query: 389 NRAFDEMG--DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
++ FDE+ +K++I W+ LIAGY HG+G A+ L+ +M H GM PN++TF S+L ACS
Sbjct: 542 HKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACS 601
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
H GL +G LF MI Y P H++CVVDL R G+L+ AY++I+ M + S+W
Sbjct: 602 HRGLVDDGLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIW 661
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTR 560
A+LGAC I+ N LGE+AA LF++EPE + NY++L+NIY A G W +A +
Sbjct: 662 GALLGACLIHQNVELGEVAAERLFELEPESTGNYILLANIYAAVGRWKDAENHK 715
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 142/506 (28%), Positives = 265/506 (52%), Gaps = 30/506 (5%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNG--YESN-LHLSTKVIIFYAKVGDVLSARKAFDRM 91
SLL ++ + ++H H IT+G + N +HL + + + YA G V ARK FD +
Sbjct: 84 SLLCHYAATRSLNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDL 143
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG-VRANQFTYSSALRACARMRWLQGG 150
+ ++ W A+I Y G+ +AL VF +M+ SG +++T+ ++AC+ M L G
Sbjct: 144 SDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKACSVMSMLNVG 203
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+I G F N+FV+++LL +Y CG + A +F + ++ VVSWN MI G
Sbjct: 204 VLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQN 263
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLGLESSNKL 269
G +++ +F SMM ++PD T+ S L S G ++ +++ ++H L+ K L+ ++
Sbjct: 264 GRPEEALAVFNSMMDARVEPDSATIVSAL-PSCGHLKELELGIKVHKLVQKNHLQEKIEV 322
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+L+D+Y++ G + A ++ + D+I+ T++I+G+ + N +K A L M L
Sbjct: 323 RNALVDMYSRCGGMDEASLVFAETKEKDVITWTSMINGYIMNGN-AKSALALCPAMQLDG 381
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ + V L +L+ CA++ L G+ +HA+ + + D V ALIDMYAK ++ +
Sbjct: 382 VVPNAVTLASLLSACASLCCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSF 441
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
+ F + K + W +L++G + EA+ L+K M E + N TF S++ A
Sbjct: 442 QVFAKTSMKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPA----- 496
Query: 450 LTCEGWELFTDM---INKYRILPRAEHFSCV------VDLFARRGQLESAYNMIRQM-NI 499
+ + D+ +N + L R+ S + +D++++ G L+ A+ + ++ N
Sbjct: 497 -----YAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNK 551
Query: 500 KPTASLWSAILGACSIYGNTSLGELA 525
+ +WS ++ ++G+ GE A
Sbjct: 552 EKDIIVWSVLIAGYGMHGH---GETA 574
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 183/527 (34%), Positives = 309/527 (58%), Gaps = 1/527 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HAH + +G++SNL +++ ++ Y K V ARK FD+MP+R+ V W MI+G +N
Sbjct: 125 LHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCC 184
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
++++ VF M+ GVR + T ++ L A A M+ ++ G IQ K F + +V +
Sbjct: 185 YDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTG 244
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+ +++KC ++ A +LF I + D+VS+NA+I G + G + + FR ++ G +
Sbjct: 245 LISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVS 304
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
T+ ++ S L I +K G ++ +L +Y++ I A QL+
Sbjct: 305 SSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFD 364
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
+ + + A+ISG+A+ ++ A LF++M+ + + V + +L+ CA + +L+
Sbjct: 365 ESSEKTVAAWNAMISGYAQS-GLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALS 423
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
G+ +H + V ALIDMYAK G I++A++ FD +KN ++W ++I GY
Sbjct: 424 FGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYG 483
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
HGYG EA++L+ +M H G P+ VTFLS+L+ACSH GL EG E+F M+NKYRI P A
Sbjct: 484 LHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLA 543
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
EH++C+VD+ R GQLE A IR+M ++P ++W +LGAC I+ +T+L +A+ LF+
Sbjct: 544 EHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFE 603
Query: 532 MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
++P YV+LSNIY+ + A R+ +++R+L K PG + ++
Sbjct: 604 LDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIE 650
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 133/482 (27%), Positives = 239/482 (49%), Gaps = 13/482 (2%)
Query: 53 HAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYD 112
HA +I NGY+ +L TK+ VG AR F +P+ ++ + +I G++ + D
Sbjct: 28 HAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGFSFSP-D 86
Query: 113 ENALLVFSAMLR-SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+++ ++ +L+ + + + FTY+ A+ A G + F NLFV SA
Sbjct: 87 ASSISFYTHLLKNTTLSPDNFTYAFAISASPDDNL---GMCLHAHAVVDGFDSNLFVASA 143
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+DLY K + A +F+++ +D V WN MI GL DDS +F+ M+ QG++ D
Sbjct: 144 LVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLD 203
Query: 232 CFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
T+ ++L A V ++ +K+ I L +KLG + + LI V++K + +A L+
Sbjct: 204 STTVATVLPA-VAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLF 262
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
+ K D++S ALISGF+ + ++ A F+++++ + + ++ + + L
Sbjct: 263 GMIRKPDLVSYNALISGFSC-NGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHL 321
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
+L I F K + +V AL +Y++ EI A + FDE +K V +W ++I+GY
Sbjct: 322 HLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGY 381
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
A+ G AI L+++M PN VT S+L AC+ G G + +I +
Sbjct: 382 AQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVH-QLIKSKNLEQN 440
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
+ ++D++A+ G + A + + K T + + I G YG G+ A +
Sbjct: 441 IYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFG----YGLHGYGDEALKLFN 496
Query: 531 DM 532
+M
Sbjct: 497 EM 498
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 182/390 (46%), Gaps = 7/390 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD +T ++L + + + I + G+ + ++ T +I ++K DV +AR
Sbjct: 202 LDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLL 261
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F + + ++VS+ A+ISG++ NG E A+ F +L SG R + T + + L
Sbjct: 262 FGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHL 321
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
IQG K + V +AL +Y++ I+ A LF+ K V +WNAMI G
Sbjct: 322 HLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGY 381
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLES 265
A G + + LF+ MM P+ T+ SIL A +G + K +H LI LE
Sbjct: 382 AQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGK--SVHQLIKSKNLEQ 439
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ ++ +LID+YAK G+I A QL+ + + ++ +I G+ + EA LF +M
Sbjct: 440 NIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGL-HGYGDEALKLFNEM 498
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQI-HAFAFKYQSSYDAAVGNALIDMYAKSGE 384
+ V +L C++ + G +I HA KY+ A ++D+ ++G+
Sbjct: 499 LHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQ 558
Query: 385 IADANRAFDEMG-DKNVISWTSLIAGYAKH 413
+ A +M + W +L+ H
Sbjct: 559 LEKALEFIRKMPVEPGPAVWGTLLGACMIH 588
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 132/283 (46%), Gaps = 34/283 (12%)
Query: 251 ISQIHDLIIKLG----LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
+++ H +I+ G L + KLT L DV G+ R A L+ S+ K DI LI
Sbjct: 24 LAETHAQLIRNGYQHDLATVTKLTQKLFDV----GATRHARALFFSVPKPDIFLFNVLIK 79
Query: 307 GFARDDNHSKEAF--DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
GF+ + S +F L K+ L D+ ++ + NLG +HA A
Sbjct: 80 GFSFSPDASSISFYTHLLKNTTLSP---DNFTYAFAISASPDD---NLGMCLHAHAVVDG 133
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
+ V +AL+D+Y K +A A + FD+M D++ + W ++I G ++ ++++++K
Sbjct: 134 FDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFK 193
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF-----SCVVD 479
M +G+ + T ++L A + E E+ M + L HF + ++
Sbjct: 194 DMVAQGVRLDSTTVATVLPAVA------EMQEVKVGMGIQCLALKLGFHFDDYVLTGLIS 247
Query: 480 LFARRGQLESA---YNMIRQMNIKPTASLWSAILGACSIYGNT 519
+F++ +++A + MIR KP ++A++ S G T
Sbjct: 248 VFSKCEDVDTARLLFGMIR----KPDLVSYNALISGFSCNGET 286
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 188/538 (34%), Positives = 313/538 (58%), Gaps = 7/538 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H ++ NG + + +S +I Y K G+V AR FD+ ++VV+W +MISGYA NG
Sbjct: 216 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
D AL +F +M + VR ++ +++S ++ CA ++ L+ + S+ K F+ + +++A
Sbjct: 276 DLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTA 335
Query: 172 LLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
L+ Y+KC + DA LF+ I +VVSW AMI G +++ LF M R+G++P
Sbjct: 336 LMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRP 395
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
+ FT IL A + ++ S++H ++K E S+ + +L+D Y K G + A +++
Sbjct: 396 NEFTYSVILTA----LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVF 451
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV-AS 349
+ DI++ +A+++G+A+ ++ A +F ++ + ++ +LN+CA AS
Sbjct: 452 SGIDDKDIVAWSAMLAGYAQT-GETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNAS 510
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
+ G+Q H FA K + V +AL+ MYAK G I A F +K+++SW S+I+G
Sbjct: 511 MGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISG 570
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
YA+HG +A++++K+MK + + VTF+ + AC+H GL EG + F M+ +I P
Sbjct: 571 YAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAP 630
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
EH SC+VDL++R GQLE A +I M +++W IL AC ++ T LG LAA +
Sbjct: 631 TKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKI 690
Query: 530 FDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKNILLL 587
M+PE S YV+LSN+Y +G W K RKLM ER+++K PGYS+++ K L
Sbjct: 691 IAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFL 748
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 139/492 (28%), Positives = 258/492 (52%), Gaps = 7/492 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D S + S+L+ E +H I G+ ++ + T ++ Y K + RK
Sbjct: 91 MDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKV 150
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD M ERNVV+WT +ISGYA+N ++ L +F M G + N FT+++AL A
Sbjct: 151 FDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVG 210
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G + + K + + V ++L++LY KCG + A ILF++ E K VV+WN+MI G
Sbjct: 211 GRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGY 270
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A G + ++ +F SM ++ + S+++ EL Q+H ++K G
Sbjct: 271 AANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQ 330
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ +L+ Y+K ++ A +L++ + +++S TA+ISGF ++D +EA DLF +M
Sbjct: 331 NIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDG-KEEAVDLFSEMK 389
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
K + ++ ++L ++ ++HA K + VG AL+D Y K G++
Sbjct: 390 RKGVRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVE 445
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
+A + F + DK++++W++++AGYA+ G AI+++ ++ G+ PN+ TF S+L C+
Sbjct: 446 EAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCA 505
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
T + + F K R+ S ++ ++A++G +ESA + ++ K S W
Sbjct: 506 ATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVS-W 564
Query: 507 SAILGACSIYGN 518
++++ + +G
Sbjct: 565 NSMISGYAQHGQ 576
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 141/523 (26%), Positives = 261/523 (49%), Gaps = 43/523 (8%)
Query: 83 SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA 142
+A FD+ P R+ S+ +++ G++++G + A +F + R G+ + +SS L+ A
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
+ GR + K F++++ V ++L+D Y K +D +F+ ++ ++VV+W
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFT----LGSILRASVGGIELMKISQIHDLI 258
+I G A ND+ LF M +G +P+ FT LG + VGG L Q+H ++
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGL----QVHTVV 220
Query: 259 IKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEA 318
+K GL+ + ++ SLI++Y K G++R A L+ +++ ++ISG+A + EA
Sbjct: 221 VKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA-NGLDLEA 279
Query: 319 FDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDM 378
+F M L + + + ++ +CAN+ L Q+H KY +D + AL+
Sbjct: 280 LGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVA 339
Query: 379 YAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVT 437
Y+K + DA R F E+G NV+SWT++I+G+ ++ EA++L+ +MK +G+ PN+ T
Sbjct: 340 YSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFT 399
Query: 438 FLSLLFACS-------HTGLTCEGWE----LFTDMINKYRILPRAEH----FSCVVDL-- 480
+ +L A H + +E + T +++ Y L + E FS + D
Sbjct: 400 YSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDI 459
Query: 481 ---------FARRGQLESAYNMIRQMN---IKPTASLWSAILGACSIYGNTSLGELAARN 528
+A+ G+ E+A M ++ IKP +S+IL C+ N S+G+ +
Sbjct: 460 VAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAAT-NASMGQGKQFH 518
Query: 529 LFDMEPEKSVNYVVLS---NIYTAAGAWDNARKTRKLMEERSL 568
F ++ + V S +Y G ++A + K E+ L
Sbjct: 519 GFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDL 561
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 4/188 (2%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAER-QAHLIHAHIITNGYESNL 65
+TG+ + A+K + P+ T+ S+L C A Q H I + +S+L
Sbjct: 471 QTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSL 530
Query: 66 HLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
+S+ ++ YAK G++ SA + F R E+++VSW +MISGYAQ+G AL VF M +
Sbjct: 531 CVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKR 590
Query: 126 GVRANQFTYSSALRACARMRWL-QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIED 184
V+ + T+ AC + +G + ++ + S ++DLY++ G +E
Sbjct: 591 KVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEK 650
Query: 185 AWILFERI 192
A + E +
Sbjct: 651 AMKVIENM 658
>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 198/563 (35%), Positives = 311/563 (55%), Gaps = 4/563 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ S+++ C + A +HAH++ + + ++L +I Y K + A F
Sbjct: 198 DHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVF 257
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV-RANQFTYSSALRACARMRWL 147
R+ ++++SW +MI+G++Q GY+ AL F ML V + N+F + SA AC+++
Sbjct: 258 SRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEP 317
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
GR I G K +LF +L D+YAKCG++E A +F IE+ D+V+WNA+I G
Sbjct: 318 DCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGF 377
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A +S F M G+ P+ T+ S+L A + L Q+H I+K+G
Sbjct: 378 ASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDI 437
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ SL+ +Y+K ++ A Q++ + K DI+S L++ N + E L K M
Sbjct: 438 PVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTA-CLQQNQAGEVLRLTKLMF 496
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
++ D V L +L +AS +G QIH F K + D +V NALI+MY K G +
Sbjct: 497 ASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLE 556
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A + FD +G+ ++ISW+SLI GYA+ G G EA EL++ M+ G+ PN++TF+ +L ACS
Sbjct: 557 CARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACS 616
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
H G+ EG +L+ M YRI P EH SC+VDL AR G L+ A + IRQM P +W
Sbjct: 617 HIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVW 676
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
+L AC ++GN +G+ AA N+ ++P S V+L NI+ ++G W + + R M
Sbjct: 677 KTLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRM 736
Query: 567 SLRKNPGYSFLQ-SSKKNILLLE 588
+ K PG S+++ K ++ L E
Sbjct: 737 DVGKVPGQSWIEIKDKVHVFLAE 759
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 153/512 (29%), Positives = 263/512 (51%), Gaps = 6/512 (1%)
Query: 1 MNIVRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
+++ + N LK A C + L TY L+ C ++ IH H++T
Sbjct: 70 ISLCKKNLHREALK-AFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCN 128
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
Y+ ++ L ++ Y K G + AR FD MP +NVVSWT+MISGY++ G ++NA+ ++
Sbjct: 129 YQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYV 188
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
MLRSG + FT+ S +++C+ + + R + + K F +L ++AL+ +Y K
Sbjct: 189 QMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFS 248
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGM-KPDCFTLGSIL 239
+ DA +F RI KD++SW +MI G + G+ ++ FR M+ Q + +P+ F GS
Sbjct: 249 QMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAF 308
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
A +E QIH L IK GL S SL D+YAK G + SA ++ + K D++
Sbjct: 309 SACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLV 368
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
+ A+I+GFA N +KE+ F M + +DV + +L C+ LN G Q+H++
Sbjct: 369 AWNAIIAGFASVSN-AKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSY 427
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK-NVISWTSLIAGYAKHGYGHE 418
K + D V N+L+ MY+K + DA + F+++G+K +++SW +L+ + E
Sbjct: 428 IVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGE 487
Query: 419 AIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVV 478
+ L K M + P+ VT ++L + G ++ I K + + ++
Sbjct: 488 VLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHC-FIMKSGLNLDISVSNALI 546
Query: 479 DLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
+++ + G LE A M + P WS+++
Sbjct: 547 NMYTKCGSLECARKMFDSIG-NPDIISWSSLI 577
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 200/579 (34%), Positives = 308/579 (53%), Gaps = 4/579 (0%)
Query: 6 ANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCI--DKKAERQAHLIHAHIITNGYES 63
A GQ +L + L + +TY+S+L A ++H H G+ S
Sbjct: 397 AQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFIS 456
Query: 64 NLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML 123
+L + +I YAK G + AR FD M +R+V+SW AM+ G AQNG A VF M
Sbjct: 457 DLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQ 516
Query: 124 RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIE 183
+ G+ + TY S L L+ + + + + V SA + +Y +CG I+
Sbjct: 517 QEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSID 576
Query: 184 DAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV 243
DA +LF+++ + V +WNAMIGG A Q ++ LF M R+G PD T +IL A+V
Sbjct: 577 DARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANV 636
Query: 244 GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTA 303
L + ++H GL ++ +L+ Y+K G+++ A Q++ M++ ++ + T
Sbjct: 637 DEEALEWVKEVHSHATDAGL-VDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTM 695
Query: 304 LISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY 363
+I G A+ +AF F M+ + + D +L+ CA+ +L +++H A
Sbjct: 696 MIGGLAQH-GCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSA 754
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELY 423
D VGNAL+ MYAK G I DA FD+M +++V SWT +I G A+HG G EA++ +
Sbjct: 755 GLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFF 814
Query: 424 KKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFAR 483
KMK EG PN +++++L ACSH GL EG F M Y I P EH++C+VDL R
Sbjct: 815 VKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGR 874
Query: 484 RGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVL 543
G LE A I M I+P + W A+LGAC YGN + E AA+ ++P+ + YV+L
Sbjct: 875 AGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLL 934
Query: 544 SNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
SNIY A G W+ R +M+ + +RK PG S+++ +
Sbjct: 935 SNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNR 973
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 162/498 (32%), Positives = 281/498 (56%), Gaps = 23/498 (4%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D +Y+++LQ C+ ++ A +H II +G E NL+++ K++ Y + G + AR+
Sbjct: 116 IDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQV 175
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD++ ++N+ WT MI GYA+ G+ E+A+ V+ M + + N+ TY S L+AC L
Sbjct: 176 FDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNL 235
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G+ I I + F ++ V++AL+++Y KCG IEDA ++F+++ ++V+SW MIGGL
Sbjct: 236 KWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGL 295
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A G ++F LF M R+G P+ +T SIL A+ L + ++H + GL
Sbjct: 296 AHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDL 355
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
++ +L+ +YAK GSI A ++ M + DI S T +I G A+ +EAF LF M
Sbjct: 356 RVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQ-HGRGQEAFSLFLQM-- 412
Query: 328 KKMG----IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
++ G + + L + A+ ++L + +H A + D +GNALI MYAK G
Sbjct: 413 QRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCG 472
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
I DA FD M D++VISW +++ G A++G GHEA ++ +M+ EG+VP+ T+LSLL
Sbjct: 473 SIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLN 532
Query: 444 ACSHTGLTCEGW-------ELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQ 496
+H W + T +I+ +R+ S + ++ R G ++ A + +
Sbjct: 533 --THGSTDALEWVNEVHKHAVETGLISDFRV------GSAFIHMYIRCGSIDDARLLFDK 584
Query: 497 MNIKPTASLWSAILGACS 514
++++ + W+A++G +
Sbjct: 585 LSVRHVTT-WNAMIGGAA 601
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 195/582 (33%), Positives = 330/582 (56%), Gaps = 9/582 (1%)
Query: 9 KTGQLKQALKF-SLSCPDTLLDPSTYMS----LLQFCIDKKAERQAHLIHAHI-ITNGYE 62
++G LK+AL F D +LD + LLQ C +K +H + + +
Sbjct: 79 ESGNLKEALDFLQRESDDVVLDSAQRSEAMGVLLQACGQRKDIEVGRRLHEMVSASTQFC 138
Query: 63 SNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAM 122
++ L+T++I Y+ G +R FD++ +N+ W A++S Y +N E+A+ +FS +
Sbjct: 139 NDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSEL 198
Query: 123 LR-SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
+ + + + FT ++ACA + L G++I G K V ++FV +AL+ +Y KCG
Sbjct: 199 ISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGL 258
Query: 182 IEDAWI-LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+E+A +F+ ++ K V SWNA++ G A + L+ M G+ PD FT+GS+L
Sbjct: 259 VEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLL 318
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
A L +IH ++ GL + SL+ +Y G +A L+ M ++S
Sbjct: 319 ACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVS 378
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
+I+G++++ EA +LF+ M+ + ++ + + C+ +++L LG+++H FA
Sbjct: 379 WNVMIAGYSQN-GLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFA 437
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
K + D V +++IDMYAK G I + R FD + +K+V SW +IAGY HG G EA+
Sbjct: 438 LKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEAL 497
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDL 480
EL++KM G+ P+D TF +L ACSH GL +G E F M+N + I P+ EH++CVVD+
Sbjct: 498 ELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDM 557
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNY 540
R G+++ A +I +M P + +WS++L +C I+GN LGE A L ++EPEK NY
Sbjct: 558 LGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENY 617
Query: 541 VVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
V++SN++ +G WD+ R+ R M++ L+K+ G S+++ K
Sbjct: 618 VLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGK 659
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 195/584 (33%), Positives = 321/584 (54%), Gaps = 5/584 (0%)
Query: 2 NIVRANF-KTGQLKQALKFSLSCPDTLLDPSTY-MSLLQFCIDK-KAERQAHLIHAHIIT 58
N++ + K G+ +++L + + + P + +S L CI R + H +I+
Sbjct: 386 NLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVK 445
Query: 59 NGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLV 118
G+ + + +I FYAK + A F+RMP ++ +SW ++ISG + NG + A+ +
Sbjct: 446 LGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIEL 505
Query: 119 FSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
F M G + T S L ACA+ R+ GR++ G K + + +ALLD+Y+
Sbjct: 506 FIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSN 565
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
C + +F + +K+VVSW AMI G D L + M+ G++PD F + S
Sbjct: 566 CSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSA 625
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
L A G L + +H I+ G+E + +L+++Y K ++ A ++ + D+
Sbjct: 626 LHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDV 685
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
IS LI G++R+ N E+F LF DM+L+ + V + +L A+++SL GR+IHA
Sbjct: 686 ISWNTLIGGYSRN-NFPNESFSLFSDMLLQ-FRPNAVTMTCILPAAASISSLERGREIHA 743
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHE 418
+A + D+ NAL+DMY K G + A FD + KN+ISWT +IAGY HG+G
Sbjct: 744 YALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKH 803
Query: 419 AIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVV 478
AI L+++M+ G+ P+ +F ++L+AC H+GL EG F M +Y+I P+ +H++C+V
Sbjct: 804 AIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIV 863
Query: 479 DLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSV 538
DL +R G L+ A I M I+P +S+W ++L C I+ N L E A +F +EPE +
Sbjct: 864 DLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEPENTG 923
Query: 539 NYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
YV+L+NIY A W+ +K + + R LR+N GYS+++ K
Sbjct: 924 YYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGYSWIEVRSK 967
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 146/523 (27%), Positives = 245/523 (46%), Gaps = 42/523 (8%)
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPER-NVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
L +K++ Y K GD+ SAR+ FD M + NV W ++ GYA+ G E +L +F M
Sbjct: 352 LGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHEL 411
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
G+ ++ S L+ + + G + G I K F V +AL+ YAK I DA
Sbjct: 412 GIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDA 471
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGG 245
++F R+ R+D +SWN++I G + G N ++ LF M QG + D TL S+L A
Sbjct: 472 VLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQS 531
Query: 246 IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALI 305
+H +K GL L +L+D+Y+ +S Q++RSM + +++S TA+I
Sbjct: 532 RYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMI 591
Query: 306 SGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS 365
+ + R K A L ++M+L + D + L+ A SL G+ +H + +
Sbjct: 592 TSYMRAGLFDKVA-GLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGM 650
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKK 425
V NAL++MY K + +A FD + +K+VISW +LI GY+++ + +E+ L+
Sbjct: 651 EKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSD 710
Query: 426 MKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRG 485
M + PN VT +L A + G E+ + + L + + +VD++ + G
Sbjct: 711 MLLQ-FRPNAVTMTCILPAAASISSLERGREIHAYALRR-GFLEDSYASNALVDMYVKCG 768
Query: 486 QLESA----------------------------------YNMIRQMNIKPTASLWSAILG 511
L A + +R I+P A+ +SAIL
Sbjct: 769 ALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILY 828
Query: 512 ACSIYGNTSLGEL---AARNLFDMEPEKSVNYVVLSNIYTAAG 551
AC G + G A + + +EP K +Y + ++ + G
Sbjct: 829 ACCHSGLAAEGRRFFKAMQKEYKIEP-KLKHYTCIVDLLSRTG 870
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 150/526 (28%), Positives = 250/526 (47%), Gaps = 36/526 (6%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHI------ITNGYE 62
+ G L AL+ S D +D +Y ++Q C ++++ A HA I T G
Sbjct: 78 QAGDLAGALRLLGS--DGGVDVRSYCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKG 135
Query: 63 SNLHLSTKVIIFYAKVGDVLSARKAFDRMPER--NVVSWTAMISGYAQNGYDENALLVFS 120
S L ++++ Y K GD+ AR FD MP + +V WT+++S YA+ G + A+ +F
Sbjct: 136 SVL--GKRLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFR 193
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M GV + S L+ + + L G +I G ++K + V +AL+ +Y++CG
Sbjct: 194 QMQCCGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCG 253
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+EDA +F+ + +D +SWN+MIGG G++ + LF M QG + T+ S+L
Sbjct: 254 RMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLP 313
Query: 241 ASVG-GIELMKISQIHDLIIKLGLE----------SSNKLTGSLIDVYAKYGSIRSAYQL 289
A G G L+ +H +K GL L L+ +Y K G + SA ++
Sbjct: 314 ACAGLGYGLIG-KAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRV 372
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ +M + LI G +E+ LF M + D+ + +L ++
Sbjct: 373 FDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSC 432
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
G H + K AV NALI YAKS I DA F+ M ++ ISW S+I+G
Sbjct: 433 ARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISG 492
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT-----GLTCEGWELFTDMINK 464
+ +G EAIEL+ +M +G + VT LS+L AC+ + G G+ + T +I +
Sbjct: 493 CSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGE 552
Query: 465 YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
+ + ++D+++ +S + R M K S W+A++
Sbjct: 553 TSLA------NALLDMYSNCSDWQSTNQIFRSMGQKNVVS-WTAMI 591
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 200/619 (32%), Positives = 317/619 (51%), Gaps = 73/619 (11%)
Query: 11 GQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTK 70
G L+ A++ C + L+ TY S+LQ C K+ +H+ I +N + L K
Sbjct: 80 GDLENAMELICMCKKSELETKTYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLK 139
Query: 71 VIIFYAKVGDVLSARKAFDRM--------------------------------------- 91
++ FYA GD+ R+ FD M
Sbjct: 140 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 199
Query: 92 -PE-----------RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALR 139
PE R+V+SW +MISGY NG E L ++ M+ G+ + T S L
Sbjct: 200 RPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 259
Query: 140 ACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS 199
CA L G+ + K F + + LLD+Y+KCG ++ A +FE++ ++VVS
Sbjct: 260 GCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS 319
Query: 200 WNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLII 259
W +MI G G +D + L + M ++G+K D + SIL A L +HD I
Sbjct: 320 WTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIK 379
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
+ES+ + +L+D+YAK GS+ +A ++ +M+ DIIS +I
Sbjct: 380 ANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIG------------- 426
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMY 379
++ D + +L CA++++L G++IH + + S D V NAL+D+Y
Sbjct: 427 ---------ELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLY 477
Query: 380 AKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFL 439
K G + A FD + K+++SWT +IAGY HGYG+EAI + +M+ G+ P++V+F+
Sbjct: 478 VKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFI 537
Query: 440 SLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
S+L+ACSH+GL +GW F M N + I P+ EH++C+VDL +R G L AY I + I
Sbjct: 538 SILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPI 597
Query: 500 KPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKT 559
P A++W A+L C Y + L E A +F++EPE S YV+L+NIY A W+ ++
Sbjct: 598 APDATIWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRL 657
Query: 560 RKLMEERSLRKNPGYSFLQ 578
R+ + ++ LRKNPG S+++
Sbjct: 658 REKIGKQGLRKNPGCSWIE 676
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 10/212 (4%)
Query: 1 MNIVRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
M + F T +K + ++ + D T +L C A + IH +I+ NG
Sbjct: 403 MEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGYILRNG 462
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
Y S+ H++ ++ Y K G + AR FD +P +++VSWT MI+GY +GY A+ F+
Sbjct: 463 YSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFN 522
Query: 121 AMLRSGVRANQFTYSSALRACARMRWL-QGGRMIQGSIQKGRFVENLFVK----SALLDL 175
M +G+ ++ ++ S L AC+ L QG R I K F N+ K + ++DL
Sbjct: 523 EMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFY--IMKNDF--NIEPKLEHYACMVDL 578
Query: 176 YAKCGWIEDAWILFERIE-RKDVVSWNAMIGG 206
++ G + A+ E + D W A++ G
Sbjct: 579 LSRTGNLSKAYEFIETLPIAPDATIWGALLCG 610
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 187/547 (34%), Positives = 316/547 (57%), Gaps = 3/547 (0%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y S+ + C A +HAH I N + ++ + T ++ YAK ++ AR+AF +P
Sbjct: 240 YASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLP 299
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR-WLQGGR 151
V + AM+ G + G AL +F M RSG+ + + S ACA ++ +LQG +
Sbjct: 300 NHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQ 359
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ +I+ G F ++ V++A+LDLY KC + +A+++F+ +E++D VSWNA+I L
Sbjct: 360 VHCLAIKSG-FDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNE 418
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
+D+ M+R GM+PD FT GS+L+A G L S +H IK GL ++
Sbjct: 419 CYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSS 478
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
+++D+Y K G I A +L+ + +++S ++ISGF+ + S+EA F +M+ +
Sbjct: 479 TVVDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLN-KQSEEAQKFFSEMLDIGVK 537
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
D +L+ CAN+A++ LG+QIH K + D + + L+DMYAK G + D+
Sbjct: 538 PDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLM 597
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLT 451
F++ + +SW ++I GYA HG G EA+E++++M+ +VPN TF+++L ACSH GL
Sbjct: 598 FEKAQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLL 657
Query: 452 CEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
+G F M ++Y++ P+ EHF+C+VD+ R + A IR M ++ A +W +L
Sbjct: 658 DDGCRYFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLS 717
Query: 512 ACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKN 571
C I + + E AA N+ ++P+ S Y++LSN+Y +G W + +TR+LM + L+K
Sbjct: 718 ICKIRQDVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKE 777
Query: 572 PGYSFLQ 578
PG S+++
Sbjct: 778 PGCSWIE 784
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/490 (27%), Positives = 238/490 (48%), Gaps = 3/490 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D +T LL+ C + IHA + G E ++ + ++ Y K + A + F
Sbjct: 135 DRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFF 194
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
M ERN VSW A I+G QN L +F M R G+ +Q Y+S R+CA + L
Sbjct: 195 HGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLS 254
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
R + K +F + V +A++D+YAK + DA F + V + NAM+ GL
Sbjct: 255 TARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLV 314
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G ++ LF+ M R G+ D +L + A ++ Q+H L IK G +
Sbjct: 315 RTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVC 374
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +++D+Y K ++ AY +++ M + D +S A+I+ +++ + ++ +M+
Sbjct: 375 VRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECY-EDTIAYLNEMLRY 433
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
M DD +L CA + SL G +H A K DA V + ++DMY K G I +A
Sbjct: 434 GMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEA 493
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ D +G + ++SW S+I+G++ + EA + + +M G+ P+ T+ ++L C++
Sbjct: 494 QKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANL 553
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
G ++ +I K +L S +VD++A+ G + + M + S W+A
Sbjct: 554 ATIELGKQIHGQII-KQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVS-WNA 611
Query: 509 ILGACSIYGN 518
++ +++G
Sbjct: 612 MICGYALHGQ 621
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 142/559 (25%), Positives = 230/559 (41%), Gaps = 67/559 (11%)
Query: 31 STYMSLLQFCID--KKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
+T+ L Q C + A HA ++ +G+ +S ++ YA+ G AR F
Sbjct: 3 ATFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVF 62
Query: 89 DRMPERN-------------------------------VVSWTAMISGYAQNGYDENALL 117
D MP R+ VVSW A++SGY Q G +++
Sbjct: 63 DVMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVG 122
Query: 118 VFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYA 177
+ M R GV ++ T + L+AC + L G I K ++ SAL+D+Y
Sbjct: 123 LSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYG 182
Query: 178 KCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGS 237
KC +EDA F + ++ VSW A I G LF M R G+ S
Sbjct: 183 KCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYAS 242
Query: 238 ILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
+ R+ L Q+H IK + + +++DVYAK S+ A + + S+
Sbjct: 243 VFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHT 302
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
+ +C A++ G R EA LF+ M +G D V L + + CA V G Q+H
Sbjct: 303 VQACNAMMVGLVR-TGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVH 361
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
A K D V NA++D+Y K + +A F EM ++ +SW ++IA ++
Sbjct: 362 CLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYE 421
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACS----------------HTGLTCEGW--ELFT 459
+ I +M GM P+D T+ S+L AC+ +GL + +
Sbjct: 422 DTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVV 481
Query: 460 DMINKYRILPRAEHF------------SCVVDLFARRGQLESAYNMIRQM---NIKPTAS 504
DM K ++ A+ + ++ F+ Q E A +M +KP
Sbjct: 482 DMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHF 541
Query: 505 LWSAILGACSIYGNTSLGE 523
++ +L C+ LG+
Sbjct: 542 TYATVLDTCANLATIELGK 560
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 157/296 (53%), Gaps = 7/296 (2%)
Query: 13 LKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVI 72
L + L++ + PD TY S+L+ C ++ ++H I +G + +S+ V+
Sbjct: 427 LNEMLRYGME-PDDF----TYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVV 481
Query: 73 IFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQF 132
Y K G + A+K DR+ + +VSW ++ISG++ N E A FS ML GV+ + F
Sbjct: 482 DMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHF 541
Query: 133 TYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI 192
TY++ L CA + ++ G+ I G I K + + ++ S L+D+YAKCG + D+ ++FE+
Sbjct: 542 TYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKA 601
Query: 193 ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKI 251
++ D VSWNAMI G A+ G ++ +F M + + P+ T ++LRA S G+
Sbjct: 602 QKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGC 661
Query: 252 SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALIS 306
+ + + LE + ++D+ + + A + RSM L+ D + L+S
Sbjct: 662 RYFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLS 717
>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 754
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 191/555 (34%), Positives = 306/555 (55%), Gaps = 10/555 (1%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y+ LLQ C+DK++ ++H H++ G N + + ++ YAK G++ AR+ F+ MP
Sbjct: 67 YVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENMP 126
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
RNVV+WT ++ G+ QN ++A+ VF ML +G + +T S+ L AC+ ++ L+ G
Sbjct: 127 RRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQ 186
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF 212
I K + V SAL LY+KCG +EDA F RI K+V+SW + + G
Sbjct: 187 FHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACGDNGA 246
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS 272
LF M+ + +KP+ FTL S L L +Q+ L IK G ES+ ++ S
Sbjct: 247 PVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNS 306
Query: 273 LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR-----DDNHS-----KEAFDLF 322
L+ +Y K G I A++ + M +++ A+I+G A+ DN S EA +F
Sbjct: 307 LLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIF 366
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
+ M D L +L++C+ + ++ G QIHA K D V +LI MY K
Sbjct: 367 SKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKC 426
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
G I A++AF EM + +I+WTS+I G+++HG +A+ +++ M G+ PN VTF+ +L
Sbjct: 427 GSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVL 486
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
ACSH G+ + F M KY+I P +H+ C+VD+F R G+LE A N I++MN +P+
Sbjct: 487 SACSHAGMVSQALNYFEIMQKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIKKMNYEPS 546
Query: 503 ASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKL 562
+WS + C +GN LG A+ L ++P+ YV+L N+Y +A +D+ + RK+
Sbjct: 547 EFIWSNFIAGCRSHGNLELGFYASEQLLSLKPKDPETYVLLLNMYLSADRFDDVSRVRKM 606
Query: 563 MEERSLRKNPGYSFL 577
ME + K +S++
Sbjct: 607 MEVEKVGKLKDWSWI 621
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 202/402 (50%), Gaps = 20/402 (4%)
Query: 30 PSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
PS Y ++L C ++ + HA+II + + + + + Y+K G + A KA
Sbjct: 163 PSIYTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKA 222
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F R+ E+NV+SWT+ +S NG L +F M+ ++ N+FT +SAL C + L
Sbjct: 223 FSRIREKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSL 282
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G + K + NL V+++LL LY K G+I +A F R++ +V+WNAMI G
Sbjct: 283 ELGTQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGH 342
Query: 208 A--MQGFND---------DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHD 256
A M+ D ++ +F + + GMKPD FTL S+L + + + QIH
Sbjct: 343 AQMMELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHA 402
Query: 257 LIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSK 316
IK G S ++ SLI +Y K GSI A + + M +I+ T++I+GF++ S+
Sbjct: 403 QTIKTGFLSDVIVSTSLISMYNKCGSIERASKAFLEMSTRTMIAWTSMITGFSQ-HGMSQ 461
Query: 317 EAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGR---QIHAFAFKYQSSYDAAVGN 373
+A +F+DM L + + V +L+ C++ ++ +I +K + D
Sbjct: 462 QALHIFEDMSLAGVRPNTVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPVMDHY--E 519
Query: 374 ALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHG 414
++DM+ + G + A +M + + W++ IAG HG
Sbjct: 520 CMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCRSHG 561
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 5/211 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T S+L C A Q IHA I G+ S++ +ST +I Y K G + A KAF
Sbjct: 377 DLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERASKAF 436
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
M R +++WT+MI+G++Q+G + AL +F M +GVR N T+ L AC+ +
Sbjct: 437 LEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSACSHAGMVS 496
Query: 149 GGRMIQGSIQKGRFVENLFVK-SALLDLYAKCGWIEDAWILFERI--ERKDVVSWNAMIG 205
+QK ++ + ++D++ + G +E A +++ E + + W+ I
Sbjct: 497 QALNYFEIMQKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFI-WSNFIA 555
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMK-PDCFTL 235
G G + F+ ++ K P+ + L
Sbjct: 556 GCRSHGNLELGFYASEQLLSLKPKDPETYVL 586
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 185/545 (33%), Positives = 303/545 (55%), Gaps = 27/545 (4%)
Query: 66 HLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
+L ++ Y K ++ AR FD+M ER++V+WT MI GYA+ G +L++F M
Sbjct: 194 NLQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREE 253
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
GV ++ + + ACA++ + R+I IQ+ +F ++ + +A++D+YAKCG +E A
Sbjct: 254 GVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESA 313
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGG 245
+F+R+E K+V+SW+AMI G + LFR M+ GM PD TL S+L A +
Sbjct: 314 REIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINC 373
Query: 246 IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALI 305
L ++ Q+H G+ + + L+ Y+ Y ++ AY L+ M D +S + ++
Sbjct: 374 RNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMV 433
Query: 306 SGFA--------------------RDDNHS-------KEAFDLFKDMILKKMGIDDVILC 338
GFA R DN++ E+ LF M + + D V +
Sbjct: 434 GGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMV 493
Query: 339 LMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK 398
++ CA + +++ R I + + + D +G A+IDM+AK G + A FD M +K
Sbjct: 494 TVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEK 553
Query: 399 NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELF 458
NVISW+++IA Y HG G +A++L+ M G++PN +T +SLL+ACSH GL EG F
Sbjct: 554 NVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFF 613
Query: 459 TDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
+ M Y + +H++CVVDL R G+L+ A +I M ++ LW A LGAC + +
Sbjct: 614 SLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKD 673
Query: 519 TSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
L E AA +L +++P+ +Y++LSNIY AG W++ KTR LM +R L+K PG+++++
Sbjct: 674 VVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIE 733
Query: 579 SSKKN 583
K+
Sbjct: 734 VDNKS 738
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 154/533 (28%), Positives = 258/533 (48%), Gaps = 59/533 (11%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L+P Y+S L C + RQ +HA +G N+ ++ K+I FY+ + A
Sbjct: 79 LNPKFYISALVNCRNLTQVRQ---VHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGL 135
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD M R+ VSW+ M+ G+A+ G N F ++R G R + +T +RAC ++ L
Sbjct: 136 FDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNL 195
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
Q AL+D+Y KC IEDA LF++++ +D+V+W MIGG
Sbjct: 196 Q---------------------MALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGY 234
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A G ++S LF M +G+ PD + +++ A + K I D I + +
Sbjct: 235 AECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDV 294
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
L ++ID+YAK G + SA +++ M + ++IS +A+I+ + ++A DLF+ M+
Sbjct: 295 ILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGY-HGQGRKALDLFRMMLS 353
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
M D + L +L C N +L RQ+HA A + + V N L+ Y+ + D
Sbjct: 354 SGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDD 413
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHG-----YG-----------------------HEA 419
A FD M ++ +SW+ ++ G+AK G +G +E+
Sbjct: 414 AYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANES 473
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD 479
+ L+ KM+ EG+VP+ V ++++FAC+ G + D I + + + ++D
Sbjct: 474 LVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKA-RTIDDYIQRKKFQLDVILGTAMID 532
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDM 532
+ A+ G +ESA + +M K S WSA++ A YG G A +LF M
Sbjct: 533 MHAKCGCVESAREIFDRMEEKNVIS-WSAMIAA---YGYHGQGR-KALDLFPM 580
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 148/314 (47%), Gaps = 31/314 (9%)
Query: 11 GQLKQALK-FSLSCPDTLL-DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLS 68
GQ ++AL F + +L D T SLL CI+ + Q +HA +G NL ++
Sbjct: 339 GQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVA 398
Query: 69 TKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR 128
K++ FY+ + A FD M R+ VSW+ M+ G+A+ G N F ++R G R
Sbjct: 399 NKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGAR 458
Query: 129 ANQFTYS----------------------------SALRACARMRWLQGGRMIQGSIQKG 160
+ +T + + ACA++ + R I IQ+
Sbjct: 459 PDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRK 518
Query: 161 RFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLF 220
+F ++ + +A++D++AKCG +E A +F+R+E K+V+SW+AMI G + LF
Sbjct: 519 KFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLF 578
Query: 221 RSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAK 279
M+R G+ P+ TL S+L A S G+ + + + + K ++D+ +
Sbjct: 579 PMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGR 638
Query: 280 YGSIRSAYQLYRSM 293
G + A +L SM
Sbjct: 639 AGRLDEALKLIESM 652
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 93/180 (51%), Gaps = 2/180 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D ++++ C A +A I +I ++ ++ L T +I +AK G V SAR+ F
Sbjct: 488 DKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIF 547
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
DRM E+NV+SW+AMI+ Y +G AL +F MLRSG+ N+ T S L AC+ ++
Sbjct: 548 DRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVE 607
Query: 149 GG-RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGG 206
G R + ++ + ++DL + G +++A L E + KD W A +G
Sbjct: 608 EGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGA 667
>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 197/563 (34%), Positives = 311/563 (55%), Gaps = 4/563 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ S+++ C + A +HAH++ + + ++L +I Y K + A F
Sbjct: 198 DHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVF 257
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV-RANQFTYSSALRACARMRWL 147
R+ ++++SW +MI+G++Q GY+ AL F ML V + N+F + SA AC+++
Sbjct: 258 SRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEP 317
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
GR I G K +LF +L D+YAKCG++E A +F IE+ D+V+WNA+I G
Sbjct: 318 DCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGF 377
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A +S F M G+ P+ T+ S+L A + L Q+H I+K+G
Sbjct: 378 ASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDI 437
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ SL+ +Y+K ++ A Q++ + K DI+S L++ N + E L K M
Sbjct: 438 PVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTA-CLQQNQAGEVLRLTKLMF 496
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
++ D V L +L +AS +G QIH F K + D +V NALI+MY K G +
Sbjct: 497 ASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLE 556
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A + FD +G+ ++ISW+SLI GYA+ G G EA EL++ M+ G+ PN++TF+ +L ACS
Sbjct: 557 CARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACS 616
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
H G+ EG +L+ M YRI P EH SC+VDL AR G L+ A + I+QM P +W
Sbjct: 617 HIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVW 676
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
+L AC ++GN +G+ AA N+ ++P S V+L NI+ ++G W + + R M
Sbjct: 677 KTLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRM 736
Query: 567 SLRKNPGYSFLQ-SSKKNILLLE 588
+ K PG S+++ K ++ L E
Sbjct: 737 DVGKVPGQSWIEIKDKVHVFLAE 759
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 173/601 (28%), Positives = 288/601 (47%), Gaps = 41/601 (6%)
Query: 1 MNIVRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
+++ + N LK A C + L TY L+ C ++ IH H++T
Sbjct: 70 ISLCKKNLHREALK-AFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCN 128
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
Y+ ++ L ++ Y K G + AR FD MP +NVVSWT+MISGY++ G ++NA+ ++
Sbjct: 129 YQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYV 188
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
MLRSG + FT+ S +++C+ + + R + + K F +L ++AL+ +Y K
Sbjct: 189 QMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFS 248
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGM-KPDCFTLGSIL 239
+ DA +F RI KD++SW +MI G + G+ ++ FR M+ Q + +P+ F GS
Sbjct: 249 QMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAF 308
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
A +E QIH L IK GL S SL D+YAK G + SA ++ + K D++
Sbjct: 309 SACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLV 368
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
+ A+I+GFA N +KE+ F M + +DV + +L C+ LN G Q+H++
Sbjct: 369 AWNAIIAGFASVSN-AKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSY 427
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK-NVISWTSLIAGYAKHGYGHE 418
K + D V N+L+ MY+K + DA + F+++G+K +++SW +L+ + E
Sbjct: 428 IVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGE 487
Query: 419 AIELYKKMKHEGMVPNDVTFLSLLFACS-----------HTGLTCEGWELFTD----MIN 463
+ L K M + P+ VT ++L + H + G L +IN
Sbjct: 488 VLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALIN 547
Query: 464 KYRIL---------------PRAEHFSCVVDLFARRGQLESAYNMIRQM---NIKPTASL 505
Y P +S ++ +A+ G + A+ + R M +KP
Sbjct: 548 MYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEIT 607
Query: 506 WSAILGACSIYGNTSLGELAARNL---FDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKL 562
+ IL ACS G G R + + + P K + + ++ AG D A K
Sbjct: 608 FVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKE-HCSCMVDLLARAGCLDVAEDFIKQ 666
Query: 563 M 563
M
Sbjct: 667 M 667
>gi|242092246|ref|XP_002436613.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
gi|241914836|gb|EER87980.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
Length = 683
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 188/563 (33%), Positives = 311/563 (55%), Gaps = 3/563 (0%)
Query: 13 LKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVI 72
L Q ++ CP+ D ++L + CI +H + G +++ ++
Sbjct: 117 LHQDMRRRRPCPEAQDDFVLSLAL-KACIRSADYGYGTRLHCDAVKVGGADGFVMNS-LV 174
Query: 73 IFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQF 132
YAK GD+ ARK F+R+P RNVVSWT+M+SG QNG+ + LL+F+ M + V +++
Sbjct: 175 DMYAKAGDLECARKVFERIPGRNVVSWTSMLSGCVQNGFAADGLLLFNKMRQDNVPPSEY 234
Query: 133 TYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI 192
T ++ + AC+ + L GR + GS+ K + N F+ +ALLD+Y KCG +EDA +F+ +
Sbjct: 235 TIATVITACSALIGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELEDAQCVFDEL 294
Query: 193 ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS 252
D+V W MI G G D+ LF + P+ T+ ++L AS +L
Sbjct: 295 SYIDLVLWTTMIVGYTQNGNPLDALRLFLDKKFANIVPNSVTIATVLSASAQLRDLSLGR 354
Query: 253 QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDD 312
IH + +KLGL + +L+D+YAK ++ A +++ S+ D+++ +++SG+A ++
Sbjct: 355 SIHGIAVKLGLVEYTVVVNALVDMYAKCQAVSEANRIFGSISNKDVVAWNSMLSGYA-EN 413
Query: 313 NHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG 372
N +A LFK M LK D + + L+ + L +G+ H +A K+ + V
Sbjct: 414 NMCNDALMLFKQMSLKGPSPDAISVVHALSASVCLGDLLIGKSFHGYAVKHAFLSNIYVS 473
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
AL+++Y K G++ A R FDEM D+N ++W ++I GY G +I+L+ +M +G+
Sbjct: 474 TALLNLYNKCGDLPSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDLFGEMLKDGVH 533
Query: 433 PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYN 492
PNDV F S+L CSHTG+ F M + I P +H++C+VD+ AR G LE A
Sbjct: 534 PNDVAFTSILSTCSHTGMVTAAKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEEALE 593
Query: 493 MIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGA 552
I M ++ S+W A L C ++ GE A + + + PE+ YV++SN+YT+ G
Sbjct: 594 FIDNMPMQADTSVWGAFLHGCELHSRLQFGEEAIKRMMVLHPERPDLYVLISNLYTSNGM 653
Query: 553 WDNARKTRKLMEERSLRKNPGYS 575
W+ ++ R+ M+E+ L K PGYS
Sbjct: 654 WEKSQAIRRWMQEKGLVKLPGYS 676
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 139/477 (29%), Positives = 250/477 (52%), Gaps = 12/477 (2%)
Query: 51 LIHAHIITNGYE---SNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYA 107
++HA ++T+ +L TK++ YA +GD+ SAR FD P + S+ M+
Sbjct: 47 VLHARLLTHTQGLLLGSLRARTKLLSCYAALGDLASARMVFDGTPRPDAYSYGVMLWCLV 106
Query: 108 QNGYDENALLVFSAMLR---SGVRANQFTYSSALRACAR-MRWLQGGRMIQGSIQKGRFV 163
Q A+ + M R + F S AL+AC R + G R+ +++ G
Sbjct: 107 QAERHAEAVALHQDMRRRRPCPEAQDDFVLSLALKACIRSADYGYGTRLHCDAVKVGG-- 164
Query: 164 ENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM 223
+ FV ++L+D+YAK G +E A +FERI ++VVSW +M+ G GF D LF M
Sbjct: 165 ADGFVMNSLVDMYAKAGDLECARKVFERIPGRNVVSWTSMLSGCVQNGFAADGLLLFNKM 224
Query: 224 MRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
+ + P +T+ +++ A I L + +H +IK GL S++ ++ +L+D+Y K G +
Sbjct: 225 RQDNVPPSEYTIATVITACSALIGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGEL 284
Query: 284 RSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNI 343
A ++ + D++ T +I G+ ++ N +A LF D + + V + +L+
Sbjct: 285 EDAQCVFDELSYIDLVLWTTMIVGYTQNGN-PLDALRLFLDKKFANIVPNSVTIATVLSA 343
Query: 344 CANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISW 403
A + L+LGR IH A K V NAL+DMYAK +++ANR F + +K+V++W
Sbjct: 344 SAQLRDLSLGRSIHGIAVKLGLVEYTVVVNALVDMYAKCQAVSEANRIFGSISNKDVVAW 403
Query: 404 TSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMIN 463
S+++GYA++ ++A+ L+K+M +G P+ ++ + L A G G + F
Sbjct: 404 NSMLSGYAENNMCNDALMLFKQMSLKGPSPDAISVVHALSASVCLGDLLIG-KSFHGYAV 462
Query: 464 KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTS 520
K+ L + +++L+ + G L SA + +MN + + + W A++G + G+++
Sbjct: 463 KHAFLSNIYVSTALLNLYNKCGDLPSARRVFDEMNDRNSVT-WCAMIGGYGMQGDSA 518
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 190/554 (34%), Positives = 313/554 (56%), Gaps = 1/554 (0%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
+T T ++L+ C + + R+ ++HA + +G E + L ++ Y+K G V A
Sbjct: 46 ETKFSKFTLSTVLKGCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDA 105
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
K F ++ +VV+W+AMI+G Q G+ + A +F M R G R NQFT SS + M
Sbjct: 106 LKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNM 165
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
L+ G+ I G I K F + V + L+ +Y K +ED +FE + D+VSWNA++
Sbjct: 166 GDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALL 225
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G +F M+ +G KP+ FT S+LR+ ++ Q+H IIK +
Sbjct: 226 SGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSD 285
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ + +L+D+YAK + A + ++ DI S T +ISG+A+ D +++A F+
Sbjct: 286 DDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTD-QAEKAVKYFRQ 344
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M + + ++ L L+ C+++A+L GRQ+HA A K D VG+AL+D+Y K G
Sbjct: 345 MQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGC 404
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ A F + ++++SW ++I+GY++HG G +A+E ++ M EG++P++ TF+ +L A
Sbjct: 405 MEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSA 464
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
CS GL EG + F M Y I P EH++C+VD+ R G+ I +MN+ P +
Sbjct: 465 CSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSL 524
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
+W +LGAC ++GN GE AA+ LF+MEP +Y++LSNI+ + G WD+ R R LM
Sbjct: 525 IWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMT 584
Query: 565 ERSLRKNPGYSFLQ 578
R ++K PG S+++
Sbjct: 585 SRGIKKEPGCSWVE 598
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 142/441 (32%), Positives = 235/441 (53%), Gaps = 15/441 (3%)
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
A + F MPE+N VSW A+++GYAQ G + L +F M + ++FT S+ L+ CA
Sbjct: 4 AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
L+ G+++ + + F+ +L+D+Y+KCG + DA +F +I DVV+W+AM
Sbjct: 64 TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAM 123
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGL 263
I GL QG ++ LF M R+G +P+ FTL S++ + +L IH I K G
Sbjct: 124 ITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGF 183
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
ES N ++ LI +Y K + +++ +M D++S AL+SGF D +F
Sbjct: 184 ESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGF-YDSQTCGRGPRIFY 242
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
M+L+ + +L C+++ G+Q+HA K S D VG AL+DMYAK+
Sbjct: 243 QMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKAR 302
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
+ DA AFD + ++++ SWT +I+GYA+ +A++ +++M+ EG+ PN+ T S L
Sbjct: 303 CLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLS 362
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHF------SCVVDLFARRGQLESAYNMIRQM 497
CSH G +L + + +A HF S +VDL+ + G +E A + + +
Sbjct: 363 GCSHMATLENGRQL-------HAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGL 415
Query: 498 NIKPTASLWSAILGACSIYGN 518
+ S W+ I+ S +G
Sbjct: 416 ISRDIVS-WNTIISGYSQHGQ 435
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 190/548 (34%), Positives = 319/548 (58%), Gaps = 3/548 (0%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
+ ++ C + +HA ++ GY+ ++ + ++ Y+K+GD+ A F ++P
Sbjct: 205 FSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVP 264
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG-- 150
+ +VVSW A ISG +G+D++AL + M SG+ N FT SS L+ACA
Sbjct: 265 KTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALG 324
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
R I G + K + ++ AL+D+YAK G ++DA +FE I RKD++ WNA+I G +
Sbjct: 325 RQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHG 384
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
G + +S LF M ++G + TL ++L+++ + +Q+H L K+G S + +
Sbjct: 385 GCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVV 444
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
LID Y K +R A +++ +II+ T++I+ ++ D H ++A LF +M+ K +
Sbjct: 445 NGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCD-HGEDAIKLFMEMLRKGL 503
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
D +L +LN CA++++ G+Q+HA K + D GNAL+ YAK G I DA+
Sbjct: 504 EPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADL 563
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
AF + DK V+SW+++I G A+HG+G A++++++M E + PN +T S+L AC+H GL
Sbjct: 564 AFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGL 623
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
E F+ M + I EH+SC++DL R G+L+ A ++ M + A++W A+L
Sbjct: 624 VDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALL 683
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
A ++ + LG+LAA LF +EPEKS +V+L+N Y +AG WD K RKLM++ ++K
Sbjct: 684 AASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVKK 743
Query: 571 NPGYSFLQ 578
P S+++
Sbjct: 744 EPAMSWVE 751
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 155/520 (29%), Positives = 270/520 (51%), Gaps = 11/520 (2%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP-ERNVVSWTAMISGYAQNG 110
+HA ++ G ++ ++ ++ Y G V AR+ FD +RN VSW M+S + +N
Sbjct: 122 VHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKND 181
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
+A+ +F M+ SGVR N+F +S + AC R L+ GR + + + + +++F +
Sbjct: 182 RCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTAN 241
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
AL+D+Y+K G I A ++F ++ + DVVSWNA I G + G + + L M G+ P
Sbjct: 242 ALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVP 301
Query: 231 DCFTLGSILRASVGGIELMKIS--QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQ 288
+ FTL SIL+A G QIH +IK +S + + +L+D+YAKYG + A +
Sbjct: 302 NVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARK 361
Query: 289 LYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
++ + + D++ ALISG + H E+ LF M + I+ L +L A++
Sbjct: 362 VFEWIPRKDLLLWNALISGCSHGGCHG-ESLSLFCRMRKEGSDINRTTLAAVLKSTASLE 420
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA 408
+++ Q+HA A K D+ V N LID Y K + AN+ F+E N+I++TS+I
Sbjct: 421 AISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMIT 480
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
++ +G +AI+L+ +M +G+ P+ SLL AC+ +G ++ +I K + +
Sbjct: 481 ALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLI-KRKFM 539
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARN 528
+ +V +A+ G +E A + K S WSA++G + +G+ R
Sbjct: 540 TDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVS-WSAMIGGLAQHGHGKRALDVFRR 598
Query: 529 LFDMEPEKSVNYVVLSNIYTA---AGAWDNARKTRKLMEE 565
+ D + N++ L+++ A AG D A+ M+E
Sbjct: 599 MVD--ERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKE 636
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 200/395 (50%), Gaps = 11/395 (2%)
Query: 52 IHAHIITNGYESNLH-LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
IHAH++ +G LH ++ FY+K SAR+ FD P+ VSW+++++ Y+ N
Sbjct: 26 IHAHLLKSGL---LHAFRNHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNA 82
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
AL F AM GVR N+F L+ CA L G + ++FV +
Sbjct: 83 LPREALAAFRAMRARGVRCNEFALPIVLK-CAPDAGL--GVQVHAVAVSTGLSGDIFVAN 139
Query: 171 ALLDLYAKCGWIEDAWILFERIER-KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
AL+ +Y G++++A +F+ R ++ VSWN M+ D+ LF M+ G++
Sbjct: 140 ALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVR 199
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
P+ F ++ A G +L ++H ++++ G + +L+D+Y+K G I A +
Sbjct: 200 PNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALV 259
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLN--ICANV 347
+ + KTD++S A ISG H + A +L M + + L +L A
Sbjct: 260 FGKVPKTDVVSWNAFISGCVL-HGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGA 318
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI 407
+ LGRQIH F K + D +G AL+DMYAK G + DA + F+ + K+++ W +LI
Sbjct: 319 GAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALI 378
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
+G + G E++ L+ +M+ EG N T ++L
Sbjct: 379 SGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVL 413
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 144/270 (53%), Gaps = 7/270 (2%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
++ +T ++L+ +A +HA G+ S+ H+ +I Y K + A K
Sbjct: 404 INRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKV 463
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F+ N++++T+MI+ +Q + E+A+ +F MLR G+ + F SS L ACA +
Sbjct: 464 FEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAY 523
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G+ + + K +F+ ++F +AL+ YAKCG IEDA + F + K VVSW+AMIGGL
Sbjct: 524 EQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGL 583
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA--SVGGIELMK--ISQIHDLIIKLGL 263
A G + +FR M+ + + P+ TL S+L A G ++ K S + ++ G+
Sbjct: 584 AQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEM---FGI 640
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ + + +ID+ + G + A +L SM
Sbjct: 641 DRTEEHYSCMIDLLGRAGKLDDAMELVNSM 670
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN 399
+L A SL LG IHA K S A N L+ Y+K A R FDE D
Sbjct: 10 LLTRYAATQSLFLGAHIHAHLLK--SGLLHAFRNHLLSFYSKCRLPGSARRVFDETPDPC 67
Query: 400 VISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
+SW+SL+ Y+ + EA+ ++ M+ G+ N+ +L GL
Sbjct: 68 HVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAGL 118
>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
Length = 673
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 184/539 (34%), Positives = 307/539 (56%), Gaps = 2/539 (0%)
Query: 37 LQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNV 96
L+ C+ R +H ++ G +++ ++ YAK GD+ +ARK FDR+PERNV
Sbjct: 130 LKACVRSADFRYGRRLHCDVVKAGGADGFVMNS-LVDMYAKAGDLENARKVFDRVPERNV 188
Query: 97 VSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGS 156
VSWT+M+SG QNG E L++F+ M + V +++T S L ACA + L GR I GS
Sbjct: 189 VSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGGLHQGRWIHGS 248
Query: 157 IQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDS 216
+ K N F+ ++LLD+YAKC +EDA +F+ +E D+V W AMI G D+
Sbjct: 249 VIKYGLSTNSFISASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVGYTQNKRPLDA 308
Query: 217 FWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDV 276
LF + P+ T+ +++ AS L +H + +KLG S+ + +L+D+
Sbjct: 309 LQLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMESDVVRNALVDM 368
Query: 277 YAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVI 336
YAK ++ A ++ +L D+++ ++++G++ ++ + E+ LF M ++ + D +
Sbjct: 369 YAKCQALPEANSIFGRILIKDVVAWNSMMAGYS-ENGMANESLVLFNRMRMQGISPDAIS 427
Query: 337 LCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG 396
+ L+ C +A L++G+ H +A KY + V AL+++Y+K ++ A R F++M
Sbjct: 428 VVNALSACVCLADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVFNDMT 487
Query: 397 DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWE 456
D+N ++W+++I GY G +I+L+ +M E + PN+V F S+L ACSHTG+ G E
Sbjct: 488 DRNSVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHTGMVTAGKE 547
Query: 457 LFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIY 516
F M + I P +H++C+VD+ AR G LE A I+ M IK S+W + L C ++
Sbjct: 548 YFDSMARHFNITPSMKHYACMVDVMARAGNLEEALEFIQNMPIKAGISVWGSFLHGCKLH 607
Query: 517 GNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYS 575
GE A + + + PE YV++SN+YT+ G WD ++ R+ M+E+ L K PG S
Sbjct: 608 SRLEFGEEAIKKMAALHPETPDFYVLMSNLYTSYGRWDKSQTIRRWMQEQGLVKLPGCS 666
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 137/487 (28%), Positives = 257/487 (52%), Gaps = 16/487 (3%)
Query: 69 TKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR 128
TK++ YA +GD+ SAR D P + ++ M+ G +A+ + M R
Sbjct: 59 TKLLSCYAALGDLASARGVLDGTPRPDAYAYRVMLGWLVDAGSHADAVALHRDMRRRCPA 118
Query: 129 ANQ--FTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
A Q S AL+AC R + GR + + K + FV ++L+D+YAK G +E+A
Sbjct: 119 AAQADVVLSLALKACVRSADFRYGRRLHCDVVKAGGADG-FVMNSLVDMYAKAGDLENAR 177
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS--VG 244
+F+R+ ++VVSW +M+ G G ++ LF M + + P +T+ S+L A +G
Sbjct: 178 KVFDRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLG 237
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
G+ + IH +IK GL +++ ++ SL+D+YAK + A +++ + DI+ TA+
Sbjct: 238 GLHQGR--WIHGSVIKYGLSTNSFISASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAM 295
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
I G+ + + +A LF + + V + +++ A + L LGR +HA K
Sbjct: 296 IVGYTQ-NKRPLDALQLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLG 354
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
+ V NAL+DMYAK + +AN F + K+V++W S++AGY+++G +E++ L+
Sbjct: 355 TMESDVVRNALVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFN 414
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
+M+ +G+ P+ ++ ++ L AC G T I KY + + +++L+++
Sbjct: 415 RMRMQGISPDAISVVNALSACVCLADLHIGKGFHTYAI-KYAFMSNIYVNTALLNLYSKC 473
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSV--NYVV 542
L SA + M + + + WSA++G + G+++ + +LF+ ++++ N VV
Sbjct: 474 ADLPSAQRVFNDMTDRNSVT-WSAMIGGYGMQGDSA----GSIDLFNEMLKENIHPNEVV 528
Query: 543 LSNIYTA 549
++I +A
Sbjct: 529 FTSILSA 535
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 197/619 (31%), Positives = 314/619 (50%), Gaps = 73/619 (11%)
Query: 11 GQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTK 70
G L+ A++ C + L+ TY S+LQ C K+ +H+ I +N + L K
Sbjct: 80 GNLENAMELVCMCQKSELETKTYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLK 139
Query: 71 VIIFYAKVGDVLSARKAFDRM--------------------------------------- 91
++ YA GD+ R+ FD M
Sbjct: 140 LVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 199
Query: 92 -PE-----------RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALR 139
PE R+V+SW +MISGY NG E L ++ M+ G+ + T S L
Sbjct: 200 RPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLV 259
Query: 140 ACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS 199
CA L G+ + K F + + LLD+Y+KCG ++ A +FE++ ++VVS
Sbjct: 260 GCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS 319
Query: 200 WNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLII 259
W +MI G G +D + L + M ++G+K D SIL A L +HD I
Sbjct: 320 WTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIK 379
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
+ES+ + +L+D+Y K GS+ A ++ +M+ DIIS +I
Sbjct: 380 ANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIG------------- 426
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMY 379
++ D + +L CA++++L G++IH + + S D V NAL+D+Y
Sbjct: 427 ---------ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLY 477
Query: 380 AKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFL 439
K G + A FD + K+++SWT +I+GY HGYG+EAI + +M+ G+ P++V+F+
Sbjct: 478 VKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFI 537
Query: 440 SLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
S+L+ACSH+GL +GW F M N + I P+ EH++C+VDL +R G L AY I + I
Sbjct: 538 SILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPI 597
Query: 500 KPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKT 559
P A++W A+L C IY + L E A +F++EPE + YV+L+NIY A W+ ++
Sbjct: 598 APDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRM 657
Query: 560 RKLMEERSLRKNPGYSFLQ 578
R+ + ++ LRKNPG S+++
Sbjct: 658 REKIGKKGLRKNPGCSWIE 676
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 10/212 (4%)
Query: 1 MNIVRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
M+ + F T +K + ++ + D T +L C A + IH +I+ NG
Sbjct: 403 MDGANSVFSTMVVKDIISWNTMIGELKPDSRTMACILPACASLSALERGKEIHGYILRNG 462
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
Y S+ H++ ++ Y K G + AR FD +P +++VSWT MISGY +GY A+ F+
Sbjct: 463 YSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFN 522
Query: 121 AMLRSGVRANQFTYSSALRACARMRWL-QGGRMIQGSIQKGRFVENLFVK----SALLDL 175
M +G+ ++ ++ S L AC+ L QG R I K F N+ K + ++DL
Sbjct: 523 EMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFY--IMKNDF--NIEPKLEHYACMVDL 578
Query: 176 YAKCGWIEDAWILFERIE-RKDVVSWNAMIGG 206
++ G + A+ E + D W A++ G
Sbjct: 579 LSRTGNLSKAYEFIETLPIAPDATIWGALLCG 610
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 188/538 (34%), Positives = 311/538 (57%), Gaps = 7/538 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H ++ NG + + +S +I Y K G+V AR FD+ ++VV+W +MISGYA NG
Sbjct: 220 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 279
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
D AL +F +M + VR ++ +++S ++ CA ++ L+ + S+ K FV + +++A
Sbjct: 280 DLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTA 339
Query: 172 LLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
L+ Y+KC + DA LF+ +VVSW AMI G +++ LF M R+G++P
Sbjct: 340 LMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRP 399
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
+ FT IL A + ++ S++H ++K E S+ + +L+D Y K G + A +++
Sbjct: 400 NEFTYSVILTA----LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVF 455
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA-NVAS 349
+ DI++ +A+++G+A+ ++ A +F ++ + ++ +LN+CA AS
Sbjct: 456 SGIDNKDIVAWSAMLAGYAQA-GETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTAS 514
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
+ G+Q H FA K + V +AL+ MYAK G I A F +K+++SW S+I+G
Sbjct: 515 MGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISG 574
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
YA+HG +A++++K+MK + + VTF+ + AC+H GL EG + F M+ +I P
Sbjct: 575 YAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAP 634
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
EH SC+VDL++R GQLE A +I M +++W IL AC ++ T LG LAA +
Sbjct: 635 TKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKI 694
Query: 530 FDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKNILLL 587
M PE S YV+LSN+Y +G W K RKLM ER+++K PGYS+++ K L
Sbjct: 695 IAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFL 752
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 149/542 (27%), Positives = 276/542 (50%), Gaps = 16/542 (2%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D S + S+L+ E +H I G+ ++ + T ++ Y K + R
Sbjct: 95 MDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNV 154
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD M ERNVV+WT +ISGYA+N +E L +F M G + N FT+++AL A
Sbjct: 155 FDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVG 214
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G + + K + + V ++L++LY KCG + A ILF++ E K VV+WN+MI G
Sbjct: 215 GRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGY 274
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A G + ++ +F SM ++ + SI++ EL Q+H ++K G
Sbjct: 275 AANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQ 334
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ +L+ Y+K ++ A +L++ +++S TA+ISGF ++D +EA LF +M
Sbjct: 335 NIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDG-KEEAVGLFSEMK 393
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
K + ++ ++L ++ ++HA K + VG AL+D Y K G++
Sbjct: 394 RKGVRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVD 449
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
+A + F + +K++++W++++AGYA+ G AI+++ ++ G+ PN+ TF S+L C+
Sbjct: 450 EAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCA 509
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
T + + F K R+ S ++ ++A++G +ESA + ++ K S W
Sbjct: 510 ATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVS-W 568
Query: 507 SAILGACSIYGNTSLGELAARNLF-DMEPEK----SVNYVVLSNIYTAAGAWDNARKTRK 561
++++ + +G + A ++F +M+ K SV ++ + T AG + K
Sbjct: 569 NSMISGYAQHGQA----MKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFD 624
Query: 562 LM 563
+M
Sbjct: 625 IM 626
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 134/522 (25%), Positives = 258/522 (49%), Gaps = 43/522 (8%)
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
A FD+ P+R+ S+T+++ G++++G + A +F + G+ + +SS L+ A
Sbjct: 50 AHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSAT 109
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
+ GR + K F++++ V ++L+D Y K +D +F+ ++ ++VV+W +
Sbjct: 110 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTL 169
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFT----LGSILRASVGGIELMKISQIHDLII 259
I G A N++ LF M +G +P+ FT LG + VGG L Q+H +++
Sbjct: 170 ISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGL----QVHTVVV 225
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
K GL+ + ++ SLI++Y K G++R A L+ +++ ++ISG+A + EA
Sbjct: 226 KNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA-NGLDLEAL 284
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMY 379
+F M L + + + ++ +CAN+ L Q+H KY +D + AL+ Y
Sbjct: 285 GMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAY 344
Query: 380 AKSGEIADANRAFDEMGD-KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTF 438
+K + DA R F E G NV+SWT++I+G+ ++ EA+ L+ +MK +G+ PN+ T+
Sbjct: 345 SKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTY 404
Query: 439 LSLLFACS-------HTGLTCEGWE----LFTDMINKYRILPRAEH-------------- 473
+L A H + +E + T +++ Y L + +
Sbjct: 405 SVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIV 464
Query: 474 -FSCVVDLFARRGQLESAYNMIRQMN---IKPTASLWSAILGACSIYGNTSLGELAARNL 529
+S ++ +A+ G+ E+A + ++ +KP +S+IL C+ S+G+ +
Sbjct: 465 AWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAA-TTASMGQGKQFHG 523
Query: 530 FDMEPEKSVNYVVLS---NIYTAAGAWDNARKTRKLMEERSL 568
F ++ + V S +Y G ++A + K E+ L
Sbjct: 524 FAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDL 565
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 380 AKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFL 439
A S + A+ FD+ D++ S+TSL+ G+++ G EA L+ ++H GM D +
Sbjct: 42 ASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGM-EMDCSIF 100
Query: 440 SLLFACSHTGLTCEGWELFTDMIN----KYRILPRAEHFSCVVDLFARRGQLESAYNMIR 495
S + S T C+ ELF ++ K+ L + +VD + + + N+
Sbjct: 101 SSVLKVSAT--LCD--ELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFD 156
Query: 496 QMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPE 535
+M + + W+ ++ S Y SL E M+ E
Sbjct: 157 EMKERNVVT-WTTLI---SGYARNSLNEEVLTLFMRMQDE 192
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 191/539 (35%), Positives = 305/539 (56%), Gaps = 3/539 (0%)
Query: 51 LIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
++H +++ G+ + + +I FYAK + A FD MP+R+++SW ++I G A NG
Sbjct: 5 VVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNG 64
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
+ A+ +F M G + T S + AC + + G ++ G + + + +
Sbjct: 65 LYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGN 124
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
ALLD+Y+ C +F +E+K+VVSW AMI G D LF+ M +G++P
Sbjct: 125 ALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRP 184
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
D F + S L A G L +H I+ G+E + +L+++Y K G + A ++
Sbjct: 185 DVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIF 244
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
+ K D IS LI G++R N + EAF LF +M+L+ + + V + +L A+++SL
Sbjct: 245 DHVTKKDTISWNTLIGGYSRS-NLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLSSL 302
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
GR++HA+A + D V NAL+DMY K G + A R FD + +KN+ISWT +IAGY
Sbjct: 303 ERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGY 362
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
HG G +AI L+++MK G+ P+ +F ++L+ACSH+GL EGW F M N++RI P+
Sbjct: 363 GMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPK 422
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
+H++C+VDL G L+ AY I M I+P +S+W ++L C I+ N L E A +F
Sbjct: 423 LKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMVF 482
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ-SSKKNILLLE 588
++EPE + YV+L+NIY A W+ RK + + R LR+N G S+++ K +I E
Sbjct: 483 ELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFFAE 541
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 194/388 (50%), Gaps = 4/388 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD +T +S++ C+ ++H + + G S L ++ Y+ D S K
Sbjct: 83 LDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKI 142
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F M ++NVVSWTAMI+ Y + G+ + +F M G+R + F +SAL A A L
Sbjct: 143 FRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESL 202
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G+ + G + E L V +AL+++Y KCG++E+A +F+ + +KD +SWN +IGG
Sbjct: 203 KHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGY 262
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
+ +++F LF M+ Q ++P+ T+ IL A+ L + ++H ++ G N
Sbjct: 263 SRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDN 321
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ +L+D+Y K G++ A +L+ + ++IS T +I+G+ ++A LF+ M
Sbjct: 322 FVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGM-HGRGRDAIALFEQMKG 380
Query: 328 KKMGIDDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ D +L C++ + G R +A +++ ++D+ +G +
Sbjct: 381 SGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLK 440
Query: 387 DANRAFDEMG-DKNVISWTSLIAGYAKH 413
+A + M + + W SL+ G H
Sbjct: 441 EAYEFIETMPIEPDSSIWVSLLRGCRIH 468
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 205/438 (46%), Gaps = 39/438 (8%)
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
G ++ G + K F V +AL+ YAK IEDA ++F+ + ++D++SWN++IGG A
Sbjct: 3 GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
G D + LF M +G + D TL S++ A V +H ++ GL S L
Sbjct: 63 NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSL 122
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+L+D+Y+ RS +++R+M + +++S TA+I+ + R + K A LF++M L+
Sbjct: 123 GNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVA-GLFQEMGLEG 181
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ D + L+ A SL G+ +H +A + V NAL++MY K G + +A
Sbjct: 182 IRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEAR 241
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
FD + K+ ISW +LI GY++ +EA L+ +M + + PN VT +L A +
Sbjct: 242 FIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLS 300
Query: 450 LTCEGWELFTDMINKYRILPR-------AEHFSCVVDLFARR------------------ 484
G E+ + + + + C L ARR
Sbjct: 301 SLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIA 360
Query: 485 -----GQLESAYNMIRQM---NIKPTASLWSAILGACSIYGNTSLGEL---AARNLFDME 533
G+ A + QM I+P A +SAIL ACS G G A RN +E
Sbjct: 361 GYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIE 420
Query: 534 PEKSVNYVVLSNIYTAAG 551
P K +Y + ++ G
Sbjct: 421 P-KLKHYACMVDLLCHTG 437
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 198/619 (31%), Positives = 317/619 (51%), Gaps = 73/619 (11%)
Query: 11 GQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTK 70
G L+ A++ C + L+ TY S+LQ C K+ +H+ I +N + L K
Sbjct: 80 GDLENAMELICMCQKSELETKTYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLK 139
Query: 71 VIIFYAKVGDVLSARKAFDRM--------------------------------------- 91
++ FYA GD+ R+ FD M
Sbjct: 140 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 199
Query: 92 -PE-----------RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALR 139
PE R+V+SW +MISGY NG E L ++ M+ G+ + T S L
Sbjct: 200 RPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 259
Query: 140 ACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS 199
CA L G+ + K F + + LLD+Y+KCG ++ A +FE++ ++VVS
Sbjct: 260 GCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS 319
Query: 200 WNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLII 259
W +MI G G +D + L + M ++G+K D + SIL A L +HD I
Sbjct: 320 WTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIK 379
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
+ES+ + +L+D+YAK GS+ +A ++ +M+ DIIS +I
Sbjct: 380 ANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIG------------- 426
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMY 379
++ D + +L CA++++L G++IH + + S D V NAL+D+Y
Sbjct: 427 ---------ELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLY 477
Query: 380 AKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFL 439
K G + A FD + K+++SWT +IAGY HGYG+EAI + +M+ G+ P++V+F+
Sbjct: 478 VKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFI 537
Query: 440 SLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
S+L+ACSH+GL +GW F M N + I P+ EH++C+VDL +R G L AY + + I
Sbjct: 538 SILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPI 597
Query: 500 KPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKT 559
P A++W A+L C Y + L E A +F++EPE + YV+L+NIY A W+ ++
Sbjct: 598 APDATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRL 657
Query: 560 RKLMEERSLRKNPGYSFLQ 578
R+ + ++ LRKNPG S+++
Sbjct: 658 REKIGKQGLRKNPGCSWIE 676
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 10/212 (4%)
Query: 1 MNIVRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
M + F T +K + ++ + D T +L C A + IH +I+ NG
Sbjct: 403 MEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGYILRNG 462
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
Y S+ H++ ++ Y K G + AR FD +P +++VSWT MI+GY +GY A+ F+
Sbjct: 463 YSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFN 522
Query: 121 AMLRSGVRANQFTYSSALRACARMRWL-QGGRMIQGSIQKGRFVENLFVK----SALLDL 175
M +G+ ++ ++ S L AC+ L QG R I K F N+ K + ++DL
Sbjct: 523 EMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFY--IMKNDF--NIEPKLEHYACMVDL 578
Query: 176 YAKCGWIEDAWILFERIE-RKDVVSWNAMIGG 206
++ G + A+ E + D W A++ G
Sbjct: 579 LSRTGNLSKAYEFMETLPIAPDATIWGALLCG 610
>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 186/563 (33%), Positives = 323/563 (57%), Gaps = 8/563 (1%)
Query: 23 CPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVL 82
CPD TY +++ C + ++H + + + S+L + ++ Y G+V
Sbjct: 119 CPDNY----TYPFVIKACSELLLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVE 174
Query: 83 SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA 142
ARK FD M E++VVSW MI+GY +NG+ AL+VF+ M+ SGV + + S L AC
Sbjct: 175 EARKVFDAMKEKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACG 234
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
++ L+ GR + G +++ + + V +AL+D+YAKCG +++A ++F+ + +DVVSW +
Sbjct: 235 YLKELEVGRRVHGLVEE-KVLGKKIVSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTS 293
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
MI G + G + LF+ M +G++P+ T+ IL A L +H ++K
Sbjct: 294 MINGYILNGDAKSALSLFKIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQR 353
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
L S + SLID+YAK + ++ ++ + + AL+SG + + EA LF
Sbjct: 354 LYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWNALLSGCVH-NKLATEAIGLF 412
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
K M+++ + I+ +L +A L I+++ + + V +LID+Y+K
Sbjct: 413 KKMLMEGVEINAATCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKC 472
Query: 383 GEIADANRAFD--EMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
G + A++ F+ + +++ W+ +IAGY HG+G A+ L+K+M G+ PNDVTF S
Sbjct: 473 GSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGVKPNDVTFTS 532
Query: 441 LLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIK 500
+L +CSH G+ +G LF M+ ++ +P +H++C+VDL R G+++ AY++I+ M
Sbjct: 533 VLQSCSHAGMVDDGLYLFKFMLKDHQTIPNDDHYTCMVDLLGRAGRMDEAYDLIKTMPFM 592
Query: 501 PTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTR 560
P ++W A+LGAC ++ N LGE+AAR LF++EP + NYV+L+ +Y A G W++A R
Sbjct: 593 PGHAVWGALLGACVMHENVELGEVAARWLFELEPGNTGNYVLLAKLYAALGRWEDAENVR 652
Query: 561 KLMEERSLRKNPGYSFLQSSKKN 583
+ M++ LRK P +S +++ N
Sbjct: 653 QRMDDIGLRKAPAHSLIEAGTVN 675
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 153/513 (29%), Positives = 269/513 (52%), Gaps = 29/513 (5%)
Query: 27 LLDPST--YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
LL P T Y SLL+ ++ +HAH+IT+G S + + + ++ YA G V +A
Sbjct: 16 LLAPKTTQYQSLLKHYGAAQSLTSTKQLHAHLITSGLLS-IDIRSVLVATYAHCGYVHNA 74
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS-GVRANQFTYSSALRACAR 143
RK FD + +R + + MI Y G A+ VF ML S + +TY ++AC+
Sbjct: 75 RKLFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSE 134
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
+ ++ GR++ G +F +LFV ++LL +Y CG +E+A +F+ ++ K VVSWN M
Sbjct: 135 LLLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTM 194
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGL 263
I G GF + + +F M+ G++ D ++ S+L A EL ++H L+ + L
Sbjct: 195 INGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGLVEEKVL 254
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
++ +L+D+YAK GS+ A ++ +M++ D++S T++I+G+ + + +K A LFK
Sbjct: 255 -GKKIVSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGD-AKSALSLFK 312
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
M ++ + + V + L+L CA++ +L GR +H + K + + AV +LIDMYAK
Sbjct: 313 IMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCN 372
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
+ + F K + W +L++G + EAI L+KKM EG+ N T SLL
Sbjct: 373 CLGLSFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLP 432
Query: 444 ACSHTGLTCEGWELFTDM-----INKYRI----LPRAEHFSCVVDLFARRGQLESAYNMI 494
A + + D+ IN Y + + + + ++D++++ G LESA+ +
Sbjct: 433 A----------YGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIF 482
Query: 495 RQMNIK-PTASLWSAILGACSIYGNTSLGELAA 526
+ + +WS I+ ++G+ GE A
Sbjct: 483 NTIPVDVQDIFVWSIIIAGYGMHGH---GETAV 512
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 200/579 (34%), Positives = 323/579 (55%), Gaps = 5/579 (0%)
Query: 4 VRANFKTGQLKQALK-FSLSCPDTLLDP--STYMSLLQFCIDKKAERQAHLIHAHIITNG 60
+RA L+ AL F+ P + P T+ SLL+ C + +HA + G
Sbjct: 196 LRAAASRSDLRGALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARG 255
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENAL-LVF 119
+T + YAK AR+ FDRMP R+ V+W A+++GYA+NG E A+ +V
Sbjct: 256 LSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVV 315
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
G R + T S L ACA + L R + +G F E + V +A+LD+Y KC
Sbjct: 316 RMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKC 375
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G ++ A +F+ ++ ++ VSWNAMI G A G ++ LF+ M+ +G+ ++ + L
Sbjct: 376 GAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAAL 435
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
A L + ++H+L++++GLES+ + +LI +Y K A Q++ + +
Sbjct: 436 HACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRV 495
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
S A+I G ++ + S++A LF M L+ + D L ++ A+++ R IH +
Sbjct: 496 SWNAMILGCTQNGS-SEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGY 554
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
+ + D V ALIDMYAK G ++ A F+ D++VI+W ++I GY HG G A
Sbjct: 555 SIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVA 614
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD 479
+EL+++MK G VPN+ TFLS+L ACSH GL EG E F+ M Y + P EH+ +VD
Sbjct: 615 VELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVD 674
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVN 539
L R G+L A++ I++M ++P S++ A+LGAC ++ N L E +A+ +F++EPE+ V
Sbjct: 675 LLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVY 734
Query: 540 YVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+V+L+NIY A W + + R ME++ L+K PG+S +Q
Sbjct: 735 HVLLANIYANASLWKDVARVRTAMEKKGLQKTPGWSIVQ 773
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 188/539 (34%), Positives = 313/539 (58%), Gaps = 6/539 (1%)
Query: 43 KKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS-ARKAFDRMPERNVVSWTA 101
+KA A +H H + + +++ + T + Y K ++ + + F+ +P N+ S+ A
Sbjct: 224 QKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNA 283
Query: 102 MISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGR 161
+I GYA++ AL +F + +SG+ ++ + S A RACA ++ G + G K
Sbjct: 284 IIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSL 343
Query: 162 FVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFR 221
N+ V +A+LD+Y KCG + +A ++FE + +D VSWNA+I G + + LF
Sbjct: 344 CQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFV 403
Query: 222 SMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIK--LGLESSNKLTGSLIDVYAK 279
M++ GM+PD FT GS+L+A G L +IH+ IIK +GL+S + +LID+Y+K
Sbjct: 404 WMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGI--ALIDMYSK 461
Query: 280 YGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCL 339
G + A +L+ + + ++S A+ISGF+ S+EA F M+ + D+
Sbjct: 462 CGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQ-KQSEEAQKTFSKMLEMGVDPDNFTYAT 520
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN 399
+L+ CAN+ ++ LG+QIHA K + DA + + L+DMY+K G + D F++ +++
Sbjct: 521 ILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRD 580
Query: 400 VISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFT 459
++W +++ GYA+HG G EA+++++ M+ E + PN TFL++L AC H GL +G F
Sbjct: 581 FVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFH 640
Query: 460 DMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNT 519
M++ Y + P+ EH+SCVVD+ R GQ+ A +I M + A +W +L C I+GN
Sbjct: 641 SMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNV 700
Query: 520 SLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+ E AA ++ +EPE S YV+LSNIY AG W+ K RK+M L+K PG S+++
Sbjct: 701 EVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIE 759
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 202/389 (51%), Gaps = 3/389 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD + + C K + + +H + + +SN+ ++ ++ Y K G ++ A
Sbjct: 311 LDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLV 370
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F+ M R+ VSW A+I+ + QNG +E L +F ML+SG+ ++FTY S L+ACA + L
Sbjct: 371 FEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQAL 430
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G I I K R + FV AL+D+Y+KCG +E A L +R+ + VVSWNA+I G
Sbjct: 431 NCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGF 490
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
++Q ++++ F M+ G+ PD FT +IL + + QIH IIK L+S
Sbjct: 491 SLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDA 550
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
++ +L+D+Y+K G+++ ++ D ++ A++ G+A+ +EA +F+ M L
Sbjct: 551 YISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQ-HGLGEEALKIFEYMQL 609
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQ-IHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ + + +L C ++ + G H+ Y + ++D+ +SG+++
Sbjct: 610 ENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVS 669
Query: 387 DANRAFDEMG-DKNVISWTSLIAGYAKHG 414
A + M + + + W +L++ HG
Sbjct: 670 KALELIEGMPFEADAVIWRTLLSXCKIHG 698
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 152/589 (25%), Positives = 263/589 (44%), Gaps = 86/589 (14%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ + Q C D+KA HA +I ++ + ++ +I Y K D+ A K FD M
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGM 103
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAML---------------RSGVRANQFTYSS 136
P+R+ VSW AM+ GYA G A +F AM R G ++ T++
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAV 163
Query: 137 ALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIED----AWILFERI 192
L++C+ + GG I G K F ++ SALLD+YAKC D LF+ +
Sbjct: 164 VLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEM 223
Query: 193 ER------------------KDVV--------------------------------SWNA 202
++ DVV S+NA
Sbjct: 224 QKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNA 283
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV---GGIELMKISQIHDLII 259
+I G A ++ +FR + + G+ D +L RA G +E + Q+H L +
Sbjct: 284 IIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGL---QVHGLSM 340
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
K +S+ + +++D+Y K G++ A ++ M+ D +S A+I+ ++ N K
Sbjct: 341 KSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEK-TL 399
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMY 379
LF M+ M D+ +L CA +LN G +IH K + D+ VG ALIDMY
Sbjct: 400 SLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMY 459
Query: 380 AKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFL 439
+K G + A + D + ++ V+SW ++I+G++ EA + + KM G+ P++ T+
Sbjct: 460 SKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYA 519
Query: 440 SLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
++L C++ G ++ +I K + A S +VD++++ G ++ + +I +
Sbjct: 520 TILDTCANLVTVELGKQIHAQIIKK-ELQSDAYISSTLVDMYSKCGNMQD-FQLIFEKAP 577
Query: 500 KPTASLWSAILGACSIYGNTSLGELAAR-----NLFDMEPEKSVNYVVL 543
W+A++ Y LGE A + L +++P + VL
Sbjct: 578 NRDFVTWNAMVCG---YAQHGLGEEALKIFEYMQLENVKPNHATFLAVL 623
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 188/557 (33%), Positives = 309/557 (55%), Gaps = 1/557 (0%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
+T L C +H+ + G E + ++ ++ YAK + A + F+
Sbjct: 243 ATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFEL 302
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
MP+ ++V+W MISG QNG A +F M RSG R + T S L A + L+ G
Sbjct: 303 MPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQG 362
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ + G I + ++F+ SAL+D+Y KC + A L++ DVV + MI G +
Sbjct: 363 KEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLN 422
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
G ++++ +FR ++ Q +KP+ T+ S+L L QIH +++ E +
Sbjct: 423 GMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVE 482
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
+L+D+YAK G + ++ ++ M + D ++ ++IS F+++ +EA DLF+ M ++ +
Sbjct: 483 SALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQN-GKPQEALDLFRQMCMEGI 541
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
+++ + L+ CA++ ++ G++IH K D +ALIDMYAK G + A R
Sbjct: 542 KYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALR 601
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
F+ M DKN +SW S+I+ Y HG E++ L M+ EG P+ VTFL+L+ AC+H GL
Sbjct: 602 VFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGL 661
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
EG +LF M KY I PR EHF+C+VDL++R G+L+ A I M KP A +W A+L
Sbjct: 662 VEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALL 721
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
AC ++ N L ++A++ LF ++P S YV++SNI AG WD K R+LM++ + K
Sbjct: 722 HACRVHRNVELADIASQELFKLDPANSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILK 781
Query: 571 NPGYSFLQSSKKNILLL 587
PGYS++ + + L +
Sbjct: 782 IPGYSWVDVNNSSHLFV 798
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 160/546 (29%), Positives = 277/546 (50%), Gaps = 14/546 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T +++ C A L+H G +++++ + ++ YA G + +AR AF
Sbjct: 140 DAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAF 199
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D +PER+ V W M+ G + G + A+ +F M SG N T + L CA L
Sbjct: 200 DGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLL 259
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G + K + V + LL +YAKC ++DAW LFE + + D+V+WN MI G
Sbjct: 260 SGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCV 319
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G ++F LF M R G +PD TL S+L A L + ++H I++ +
Sbjct: 320 QNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVF 379
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
L +L+D+Y K +R A LY + D++ + +ISG+ + S+EA +F+ ++ +
Sbjct: 380 LVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVL-NGMSEEALQMFRYLLEQ 438
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ + V + +L CA++A+L LG+QIH + + V +AL+DMYAK G + +
Sbjct: 439 CIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLS 498
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ F +M K+ ++W S+I+ ++++G EA++L+++M EG+ N++T + L AC+
Sbjct: 499 HYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASL 558
Query: 449 GLTCEGWELFTDMINKYRILPRAEHF--SCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
G E+ I K I +A+ F S ++D++A+ G LE A + M K S W
Sbjct: 559 PAIYYGKEIHGVTI-KGPI--KADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVS-W 614
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPE----KSVNYVVLSNIYTAAGAWDNARKTRKL 562
++I+ A YG L + + L M+ E V ++ L + AG + + +
Sbjct: 615 NSIISA---YGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQC 671
Query: 563 MEERSL 568
M ++ L
Sbjct: 672 MTKKYL 677
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 188/376 (50%), Gaps = 6/376 (1%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS 83
PD++ T +SLL D +Q +H +I+ N ++ L + ++ Y K DV
Sbjct: 341 PDSI----TLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRM 396
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
A+ +D +VV + MISGY NG E AL +F +L ++ N T +S L CA
Sbjct: 397 AQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCAS 456
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
M L G+ I G + + + +V+SAL+D+YAKCG ++ + +F ++ +KD V+WN+M
Sbjct: 457 MAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSM 516
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGL 263
I + G ++ LFR M +G+K + T+ + L A + +IH + IK +
Sbjct: 517 ISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPI 576
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
++ +LID+YAK G++ A +++ M + +S ++IS + KE+ L
Sbjct: 577 KADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGA-HGLVKESVSLLH 635
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQI-HAFAFKYQSSYDAAVGNALIDMYAKS 382
M + D V +++ CA+ + G Q+ KY + ++D+Y++S
Sbjct: 636 GMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRS 695
Query: 383 GEIADANRAFDEMGDK 398
G++ A + +M K
Sbjct: 696 GKLDKAIQFIADMPFK 711
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 202/578 (34%), Positives = 314/578 (54%), Gaps = 7/578 (1%)
Query: 3 IVRANFKTGQLKQALKFSLSC--PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
+V+ F L+ K C PD + T SLL C A + +H+H I G
Sbjct: 337 LVQQGFSDRALELFTKMQRDCLKPDCI----TVASLLSACASVGALHKGMQLHSHAIKAG 392
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+++ L ++ Y+K DV +A K F N+V W M+ Y Q ++ +F
Sbjct: 393 MSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFR 452
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M G+ NQFTY S LR C + L G I + K F N++V S L+D+YAK G
Sbjct: 453 QMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYG 512
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+ A + R+ DVVSW AMI G ++ LF M +G++ D S +
Sbjct: 513 QLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAIS 572
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
A G L + QIH G + + +LI +YA+ G I+ AY + + + IS
Sbjct: 573 ACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNIS 632
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
+L+SG A+ + +EA +F M+ + ++ ++ A++A++ G+QIH+
Sbjct: 633 WNSLVSGLAQS-GYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMV 691
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
K + V N+LI +YAKSG I+DA R F++M ++NVISW ++I GY++HG G EA+
Sbjct: 692 LKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEAL 751
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDL 480
L+++MK G++PN VTF+ +L ACSH GL EG + F M + ++P++EH+ CVVDL
Sbjct: 752 RLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDL 811
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNY 540
R GQL+ A I++M I A +W +L AC I+ N +GE AA +L ++EPE S Y
Sbjct: 812 LGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATY 871
Query: 541 VVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
V++SNIY + W + +RKLM++R ++K PG S+++
Sbjct: 872 VLISNIYAVSRQWIHRDWSRKLMKDRGVKKEPGRSWIE 909
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 164/555 (29%), Positives = 277/555 (49%), Gaps = 52/555 (9%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H +I G+ S ++ ++ Y++ ++SA + F M R+ VS+ ++ISG Q G+
Sbjct: 283 LHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGF 342
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ AL +F+ M R ++ + T +S L ACA + L G + K ++ ++ +
Sbjct: 343 SDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGS 402
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
LLDLY+KC +E A F E +++V WN M+ DSF +FR M +GM P+
Sbjct: 403 LLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPN 462
Query: 232 CFTLGSILRA--SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
FT SILR S+G + L + QIH +IK G + + + LID+YAKYG + A ++
Sbjct: 463 QFTYPSILRTCTSLGALYLGE--QIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRI 520
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
R + + D++S TA+I+G+ + D S EA LF++M + + D++ ++ CA + +
Sbjct: 521 LRRLPEDDVVSWTAMIAGYVQHDMFS-EALQLFEEMEYRGIQFDNIGFASAISACAGIRA 579
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
L G+QIHA ++ D ++ NALI +YA+ G I +A AF+++GDKN ISW SL++G
Sbjct: 580 LRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSG 639
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTF------------------------------- 438
A+ GY EA++++ +M N T+
Sbjct: 640 LAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSE 699
Query: 439 ----LSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI 494
SL+ + +G + W F DM + I ++ ++ +++ G A +
Sbjct: 700 REVSNSLISLYAKSGSISDAWREFNDMSERNVI-----SWNAMITGYSQHGCGMEALRLF 754
Query: 495 RQMN---IKPTASLWSAILGACSIYGNTSLGELAARNLF---DMEPEKSVNYVVLSNIYT 548
+M I P + +L ACS G G ++F D+ P KS +YV + ++
Sbjct: 755 EEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVP-KSEHYVCVVDLLG 813
Query: 549 AAGAWDNARKTRKLM 563
AG D A + K M
Sbjct: 814 RAGQLDRAMEYIKEM 828
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 142/494 (28%), Positives = 263/494 (53%), Gaps = 18/494 (3%)
Query: 32 TYMSLLQFCIDKK-AERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
T+ +L+ C+ A +H+ G++S+ ++ +I Y+K G + SA+K F+
Sbjct: 161 TFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNC 220
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+ +++V+W AMISG +QNG +E A+L+F M S + + SS L A +++ + G
Sbjct: 221 ICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELG 280
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ + K F +V + L+ LY++ + A +F + +D VS+N++I GL Q
Sbjct: 281 EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQ 340
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
GF+D + LF M R +KPDC T+ S+L A L K Q+H IK G+ + L
Sbjct: 341 GFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILE 400
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
GSL+D+Y+K + +A++ + + +I+ ++ + + DN S ++F++F+ M ++ M
Sbjct: 401 GSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLS-DSFEIFRQMQMEGM 459
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
+ +L C ++ +L LG QIH K + V + LIDMYAK G++A A R
Sbjct: 460 IPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALR 519
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
+ + +V+SWT++IAGY +H EA++L+++M++ G+ +++ F S + AC+
Sbjct: 520 ILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRA 579
Query: 451 TCEGWELFTDMINKYRILPRAEHF-------SCVVDLFARRGQLESAYNMIRQMNIKPTA 503
+G ++ A F + ++ L+AR G+++ AY ++ K
Sbjct: 580 LRQGQQIHAQ--------SYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNI 631
Query: 504 SLWSAILGACSIYG 517
S W++++ + G
Sbjct: 632 S-WNSLVSGLAQSG 644
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 138/488 (28%), Positives = 248/488 (50%), Gaps = 18/488 (3%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y+ LL+ C+ + + +H I +G++ L ++ Y + GD A K FD
Sbjct: 61 YLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENS 120
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
R+V SW MI + + +F ML G+ N +T++ L+AC GG +
Sbjct: 121 NRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACV------GGDI 174
Query: 153 IQGSIQKGR-------FVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
+++ F + V + L+DLY+K G+IE A +F I KD+V+W AMI
Sbjct: 175 AFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMIS 234
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI-SQIHDLIIKLGLE 264
GL+ G +++ LF M + P + L S+L AS I+L ++ Q+H L+IK G
Sbjct: 235 GLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSAST-KIQLFELGEQLHCLVIKWGFH 293
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
S + L+ +Y++ + SA +++ +M D +S +LISG + S A +LF
Sbjct: 294 SETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQ-QGFSDRALELFTK 352
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M + D + + +L+ CA+V +L+ G Q+H+ A K S D + +L+D+Y+K +
Sbjct: 353 MQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCAD 412
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ A++ F +N++ W ++ Y + ++ E++++M+ EGM+PN T+ S+L
Sbjct: 413 VETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRT 472
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
C+ G G ++ T +I K S ++D++A+ GQL A ++R++ S
Sbjct: 473 CTSLGALYLGEQIHTHVI-KTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVS 531
Query: 505 LWSAILGA 512
W+A++
Sbjct: 532 -WTAMIAG 538
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 132/481 (27%), Positives = 221/481 (45%), Gaps = 39/481 (8%)
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
M GVR+N Y L C L + I K F + +L+D Y + G
Sbjct: 49 MEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGD 108
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
A +F+ + V SWN MI Q N F LFR M+ +G+ P+ +T +L+A
Sbjct: 109 QHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKA 168
Query: 242 SVGG-IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
VGG I + Q+H G +SS + LID+Y+K G I SA +++ + DI++
Sbjct: 169 CVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVT 228
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
A+ISG ++ + +EA LF DM ++ +L +L+ + LG Q+H
Sbjct: 229 WVAMISGLSQ-NGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLV 287
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
K+ + V N L+ +Y++S ++ A R F M ++ +S+ SLI+G + G+ A+
Sbjct: 288 IKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRAL 347
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI------------------ 462
EL+ KM+ + + P+ +T SLL AC+ G +G +L + I
Sbjct: 348 ELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLY 407
Query: 463 ---------NKYRILPRAEHFSCVVDLFARRGQLES---AYNMIRQMNIK---PTASLWS 507
+K+ + E+ + GQL++ ++ + RQM ++ P +
Sbjct: 408 SKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYP 467
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYV--VLSNIYTAAGAWDNA-RKTRKLME 564
+IL C+ G LGE ++ + +V YV VL ++Y G A R R+L E
Sbjct: 468 SILRTCTSLGALYLGEQIHTHVIKTGFQLNV-YVCSVLIDMYAKYGQLALALRILRRLPE 526
Query: 565 E 565
+
Sbjct: 527 D 527
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 139/308 (45%), Gaps = 7/308 (2%)
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
L M+ L M +G++ + +L + L + ++H I K G +
Sbjct: 33 LHMEQGKSKRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGE 92
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
L SL+D Y ++G A +++ + S +I F ++ + F LF+ M+
Sbjct: 93 PLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNF-QVFCLFRRML 151
Query: 327 LKKMGIDDVILCLMLNIC-ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ + + +L C + N +Q+H+ F Y V N LID+Y+K+G I
Sbjct: 152 AEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYI 211
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A + F+ + K++++W ++I+G +++G EAI L+ M + P S+L A
Sbjct: 212 ESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSAS 271
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSC--VVDLFARRGQLESAYNMIRQMNIKPTA 503
+ L G +L ++ K+ +E + C +V L++R +L SA + MN +
Sbjct: 272 TKIQLFELGEQLHC-LVIKWGF--HSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGV 328
Query: 504 SLWSAILG 511
S S I G
Sbjct: 329 SYNSLISG 336
>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 762
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 198/567 (34%), Positives = 315/567 (55%), Gaps = 10/567 (1%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
T ++ + Y+ +LQ CIDKK A IHAHI+ G + L T ++ YAK G + +AR
Sbjct: 65 TKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETAR 124
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
K FD +P RNVVSWT +++GY + E A+ VF ML +G +T +AL A + +
Sbjct: 125 KVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASSDLH 184
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
+ G+ I G K R + + ++L LY+KCG +E A F RI K+V+SW +I
Sbjct: 185 SKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVIS 244
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
G F M+ + ++P+ FTL S L L +QIH L IKLG ES
Sbjct: 245 AWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFES 304
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG------FARDD----NHS 315
+ + S++ +Y K G I A +L+ M +++ A+I+G FA+DD
Sbjct: 305 NLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCG 364
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNAL 375
EA +F + M D +L++C+++ +L G Q+HA K D VG AL
Sbjct: 365 TEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVGTAL 424
Query: 376 IDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND 435
++MY K G I A++AF EM + +ISWTS+I GYA++G +A+ L++ M+ G+ PN
Sbjct: 425 VNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVRPNK 484
Query: 436 VTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIR 495
+TF+ +L ACSH G+ E + F M N+Y+I P +H++C++D+F R G+L+ A++ I+
Sbjct: 485 ITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMDHYACLIDMFVRLGRLDEAFDFIK 544
Query: 496 QMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDN 555
+M+++P +WS ++ C G LG AA L +++P+ + Y +L N+Y +AG W
Sbjct: 545 EMDLEPNEFIWSILIAGCRSQGKLELGFYAAEQLLNLKPKDTETYNLLLNMYLSAGKWKE 604
Query: 556 ARKTRKLMEERSLRKNPGYSFLQSSKK 582
+ RK+M+E L + +S++ K
Sbjct: 605 VSRVRKMMKEEKLGRLKDWSWISIKDK 631
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 203/404 (50%), Gaps = 17/404 (4%)
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
+ +R G + Y L+ C + + + I I K ++ F+ + L+++YAKCG
Sbjct: 59 SFIREGTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCG 118
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+E A +F+ + R++VVSW ++ G + + +FR M+ G P +TLG+ L
Sbjct: 119 TMETARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALS 178
Query: 241 AS--VGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
AS + EL K QIH IK +E + SL +Y+K GS+ A + +R + ++
Sbjct: 179 ASSDLHSKELGK--QIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNV 236
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
IS T +IS + D+ + F +M+ + + ++ L L++C + SL++G QIH+
Sbjct: 237 ISWTTVISAWG-DNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHS 295
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAK------ 412
K + + N+++ +Y K G I +A + FDEM ++++W ++IAG+A+
Sbjct: 296 LTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFAK 355
Query: 413 -----HGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRI 467
H G EA+ ++ K+ GM P+ TF S+L CS +G ++ I K
Sbjct: 356 DDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTI-KTGF 414
Query: 468 LPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
L + +V+++ + G +E A +M+I+ S S I G
Sbjct: 415 LSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITG 458
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 197/619 (31%), Positives = 316/619 (51%), Gaps = 73/619 (11%)
Query: 11 GQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTK 70
G L+ A++ C + L+ TY S+LQ C K+ +H+ I +N + L K
Sbjct: 80 GDLENAMELVCMCQKSELETKTYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLK 139
Query: 71 VIIFYAKVGDVLSARKAFDRM--------------------------------------- 91
++ FYA GD+ R+ FD M
Sbjct: 140 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 199
Query: 92 -PE-----------RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALR 139
PE R+V+SW +MISGY NG E L ++ M+ G+ + T S L
Sbjct: 200 RPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 259
Query: 140 ACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS 199
CA L G+ + K F + + LLD+Y+KCG ++ A +FE++ ++VVS
Sbjct: 260 GCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS 319
Query: 200 WNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLII 259
W +MI G G++D + L + M ++G+K D + SIL A L +HD I
Sbjct: 320 WTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIK 379
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
+ S+ + +L+D+YAK GS+ A ++ +M+ DIIS ++
Sbjct: 380 ANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG------------- 426
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMY 379
++ D + +L CA++++L G++IH + + S D V NAL+D+Y
Sbjct: 427 ---------ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLY 477
Query: 380 AKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFL 439
K G + A FD + K+++SWT +IAGY HGYG+EAI + +M+ G+ P++V+F+
Sbjct: 478 VKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFI 537
Query: 440 SLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
S+L+ACSH+GL +GW F M N + I P+ EH++C+VDL +R G L AY I + I
Sbjct: 538 SILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPI 597
Query: 500 KPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKT 559
P A++W A+L C IY + L E A +F++EPE + YV+L+NIY A + ++
Sbjct: 598 APDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRM 657
Query: 560 RKLMEERSLRKNPGYSFLQ 578
R+ + ++ LRKNPG S+++
Sbjct: 658 REKIGKKGLRKNPGCSWIE 676
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 10/205 (4%)
Query: 8 FKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHL 67
F T +K + ++ + D T +L C A + IH +I+ NGY S+ H+
Sbjct: 410 FSTMVVKDIISWNTMVGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHV 469
Query: 68 STKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV 127
+ ++ Y K G + AR FD +P +++VSWT MI+GY +GY A+ F+ M +G+
Sbjct: 470 ANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGI 529
Query: 128 RANQFTYSSALRACARMRWL-QGGRMIQGSIQKGRFVENLFVK----SALLDLYAKCGWI 182
++ ++ S L AC+ L QG R I K F N+ K + ++DL ++ G +
Sbjct: 530 EPDEVSFISILYACSHSGLLEQGWRFFY--IMKNDF--NIEPKLEHYACMVDLLSRTGNL 585
Query: 183 EDAWILFERIE-RKDVVSWNAMIGG 206
A+ E + D W A++ G
Sbjct: 586 SKAYKFIETLPIAPDATIWGALLCG 610
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 196/588 (33%), Positives = 325/588 (55%), Gaps = 37/588 (6%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYA--KVGDV 81
P +L + LL C + +Q IHAHII G + L +K+I F A + GD+
Sbjct: 23 PYRVLQEHPSLKLLSKCQSIRTFKQ---IHAHIIKTGLHNTLFALSKLIEFSAVSRSGDI 79
Query: 82 LSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC 141
A F+ + E N+ W +MI G + + AL+ F M+ SGV N +T+ L++C
Sbjct: 80 SYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSC 139
Query: 142 ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWI-------------- 187
A++ G+ I + K FV ++F+ ++L+++YA+ G + +A +
Sbjct: 140 AKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFT 199
Query: 188 -----------------LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
LF+ + KDVVSWNAMI G A G + ++ LF M + + P
Sbjct: 200 ALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPP 259
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
+ T+ S+L A L + + I GL S+ KL +LID+Y+K G +++A +L+
Sbjct: 260 NESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELF 319
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
ML+ D+IS +I G+ ++ KEA LF++M+ + ++ +L CA++ ++
Sbjct: 320 DDMLERDVISWNVMIGGYTHMCSY-KEALALFREMLASGVEPTEITFLSILPSCAHLGAI 378
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
+LG+ IHA+ K +S ++ +LID+YAK G I A + FD M K++ SW ++I G
Sbjct: 379 DLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGL 438
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
A HG +A EL+ KM +G+ PN++TF+ +L AC H GL G + F+ M+ Y+I P+
Sbjct: 439 AMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPK 498
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
++H+ C++DL R G E A ++++ M +KP ++W ++LGAC +G LGEL A LF
Sbjct: 499 SQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLF 558
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
++EP+ YV+LSNIY AG WD+ + R + +R ++K PG + ++
Sbjct: 559 ELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIE 606
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 188/549 (34%), Positives = 311/549 (56%), Gaps = 5/549 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T ++L+ C + R ++H+ I G E + +S ++ Y+K G A K F R+
Sbjct: 332 TLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRI 391
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
+ +VVSW+A+I+ Q G A VF M SGV NQFT +S + A + L G
Sbjct: 392 EDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGE 451
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I + K F + V +AL+ +Y K G ++D +FE +D++SWNA++ G
Sbjct: 452 SIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNE 511
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGLESSNKL 269
D +F M+ +G P+ +T SILR+ S+ ++L K Q+H I+K L+ ++ +
Sbjct: 512 TCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGK--QVHAQIVKNSLDGNDFV 569
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+L+D+YAK + A ++ ++K D+ + T +++G+A+D ++A F M +
Sbjct: 570 GTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQD-GQGEKAVKCFIQMQREG 628
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ ++ L L+ C+ +A+L+ GRQ+H+ A K S D V +AL+DMYAK G + DA
Sbjct: 629 VKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAE 688
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
FD + ++ +SW ++I GY++HG G +A++ ++ M EG VP++VTF+ +L ACSH G
Sbjct: 689 VVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMG 748
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
L EG + F + Y I P EH++C+VD+ R G+ + I +M + +W +
Sbjct: 749 LIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETV 808
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
LGAC ++GN GE AA LF++EPE NY++LSN++ A G WD+ R LM R ++
Sbjct: 809 LGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVK 868
Query: 570 KNPGYSFLQ 578
K PG S+++
Sbjct: 869 KEPGCSWVE 877
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 164/538 (30%), Positives = 271/538 (50%), Gaps = 13/538 (2%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y +L+ C K + IH +I +G + HL ++ YAK G A K F +P
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
ER+VVSWTA+I+G+ GY A+ +F M R GV AN+FTY++AL+AC+ L+ G+
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQ 250
Query: 153 IQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ +I+ G F +LFV SAL+DLYAKCG + A +F + +++ VSWNA++ G A G
Sbjct: 251 VHAEAIKVGDF-SDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMG 309
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
+ LF M + FTL ++L+ L +H L I++G E ++
Sbjct: 310 DAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISC 369
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
L+D+Y+K G A +++ + D++S +A+I+ + S+EA ++FK M +
Sbjct: 370 CLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQ-KGQSREAAEVFKRMRHSGVI 428
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
+ L +++ ++ L G IHA KY YD V NAL+ MY K G + D R
Sbjct: 429 PNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRV 488
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLT 451
F+ ++++ISW +L++G+ + + ++ +M EG PN TF+S+L +CS
Sbjct: 489 FEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDV 548
Query: 452 CEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
G ++ ++ K + + +VD++A+ LE A + ++ IK W+ I+
Sbjct: 549 DLGKQVHAQIV-KNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRL-IKRDLFAWTVIVA 606
Query: 512 ACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
Y GE A + M+ E V N +T A + + L R L
Sbjct: 607 G---YAQDGQGEKAVKCFIQMQREG-----VKPNEFTLASSLSGCSRIATLDSGRQLH 656
>gi|356495419|ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Glycine max]
Length = 666
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 194/555 (34%), Positives = 318/555 (57%), Gaps = 3/555 (0%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
TL D TY +++ C D IH GY+S+ + ++ Y G+ +A+
Sbjct: 109 TLPDKFTYPVVIKACGDLSLIDVGVGIHGQTFKFGYDSDTFVQNTLLAMYMNAGEKEAAQ 168
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
FD M ER V+SW MI+GY +N E+A+ V+ M+ GV + T S L AC ++
Sbjct: 169 LVFDPMQERTVISWNTMINGYFRNNCAEDAVNVYGRMMDVGVEPDCATVVSVLPACGLLK 228
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
++ GR + +Q+ F N+ V++AL+D+Y KCG +++AW+L + ++ KDVV+W +I
Sbjct: 229 NVELGREVHTLVQEKGFWGNIVVRNALVDMYVKCGQMKEAWLLAKGMDDKDVVTWTTLIN 288
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
G + G + L M +G+KP+ ++ S+L A + L +H I+ +ES
Sbjct: 289 GYILNGDARSALMLCGMMQCEGVKPNSVSIASLLSACGSLVYLNHGKCLHAWAIRQKIES 348
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ +LI++YAK +Y+++ K AL+SGF ++ ++EA +LFK M
Sbjct: 349 EVIVETALINMYAKCNCGNLSYKVFMGTSKKRTAPWNALLSGFIQN-RLAREAIELFKQM 407
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
++K + D +L A +A L IH + + Y V + L+D+Y+K G +
Sbjct: 408 LVKDVQPDHATFNSLLPAYAILADLQQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSL 467
Query: 386 ADANRAFD--EMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
A++ F+ + DK++I W+++IA Y KHG+G A++L+ +M G+ PN VTF S+L
Sbjct: 468 GYAHQIFNIISLKDKDIIIWSAIIAAYGKHGHGKMAVKLFNQMVQSGVKPNHVTFTSVLH 527
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
ACSH GL EG+ LF M+ +++I+ +H++C++DL R G+L AYN+IR M I P
Sbjct: 528 ACSHAGLVNEGFSLFNFMLKQHQIISHVDHYTCMIDLLGRAGRLNDAYNLIRTMPITPNH 587
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
++W A+LGAC I+ N LGE+AAR F +EPE + NYV+L+ +Y A G W +A + R ++
Sbjct: 588 AVWGALLGACVIHENVELGEVAARWTFKLEPENTGNYVLLAKLYAAVGRWGDAERVRDMV 647
Query: 564 EERSLRKNPGYSFLQ 578
E LRK P +S ++
Sbjct: 648 NEVGLRKLPAHSLIE 662
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 141/511 (27%), Positives = 262/511 (51%), Gaps = 12/511 (2%)
Query: 44 KAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMI 103
++ + +HA I+T G S+ +L +K+ YA+ A FD++ + + SW AM+
Sbjct: 25 QSHSETKRLHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDKLSQPCLFSWNAMM 84
Query: 104 SGYAQNGYDENALLVFSAMLRSG-VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRF 162
Y Q G +AL +F ML SG ++FTY ++AC + + G I G K +
Sbjct: 85 RMYVQIGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGIHGQTFKFGY 144
Query: 163 VENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRS 222
+ FV++ LL +Y G E A ++F+ ++ + V+SWN MI G +D+ ++
Sbjct: 145 DSDTFVQNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRNNCAEDAVNVYGR 204
Query: 223 MMRQGMKPDCFTLGSILRAS--VGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKY 280
MM G++PDC T+ S+L A + +EL + ++H L+ + G + + +L+D+Y K
Sbjct: 205 MMDVGVEPDCATVVSVLPACGLLKNVELGR--EVHTLVQEKGFWGNIVVRNALVDMYVKC 262
Query: 281 GSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLM 340
G ++ A+ L + M D+++ T LI+G+ + + ++ A L M + + + V + +
Sbjct: 263 GQMKEAWLLAKGMDDKDVVTWTTLINGYILNGD-ARSALMLCGMMQCEGVKPNSVSIASL 321
Query: 341 LNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNV 400
L+ C ++ LN G+ +HA+A + + + V ALI+MYAK + + F K
Sbjct: 322 LSACGSLVYLNHGKCLHAWAIRQKIESEVIVETALINMYAKCNCGNLSYKVFMGTSKKRT 381
Query: 401 ISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTD 460
W +L++G+ ++ EAIEL+K+M + + P+ TF SLL A + + +
Sbjct: 382 APWNALLSGFIQNRLAREAIELFKQMLVKDVQPDHATFNSLLPAYAILADLQQAMNIHCY 441
Query: 461 MINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTS 520
+I + L R E S +VD++++ G L A+ + +++K + YG
Sbjct: 442 LI-RSGFLYRLEVASILVDIYSKCGSLGYAHQIFNIISLKDKDI--IIWSAIIAAYGKHG 498
Query: 521 LGELAARNLFDMEPEKSV--NYVVLSNIYTA 549
G++A + LF+ + V N+V +++ A
Sbjct: 499 HGKMAVK-LFNQMVQSGVKPNHVTFTSVLHA 528
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 128/279 (45%), Gaps = 3/279 (1%)
Query: 21 LSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGD 80
+ C + + SLL C +HA I ES + + T +I YAK
Sbjct: 306 MQCEGVKPNSVSIASLLSACGSLVYLNHGKCLHAWAIRQKIESEVIVETALINMYAKCNC 365
Query: 81 VLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRA 140
+ K F ++ W A++SG+ QN A+ +F ML V+ + T++S L A
Sbjct: 366 GNLSYKVFMGTSKKRTAPWNALLSGFIQNRLAREAIELFKQMLVKDVQPDHATFNSLLPA 425
Query: 141 CARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI--ERKDVV 198
A + LQ I + + F+ L V S L+D+Y+KCG + A +F I + KD++
Sbjct: 426 YAILADLQQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHQIFNIISLKDKDII 485
Query: 199 SWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDL 257
W+A+I G + LF M++ G+KP+ T S+L A S G+ S + +
Sbjct: 486 IWSAIIAAYGKHGHGKMAVKLFNQMVQSGVKPNHVTFTSVLHACSHAGLVNEGFSLFNFM 545
Query: 258 IIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT 296
+ + + S +ID+ + G + AY L R+M T
Sbjct: 546 LKQHQIISHVDHYTCMIDLLGRAGRLNDAYNLIRTMPIT 584
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 189/574 (32%), Positives = 309/574 (53%), Gaps = 7/574 (1%)
Query: 12 QLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKV 71
++ + ++ S PD + T SLL C + +H++++ G + + +
Sbjct: 230 EIFEEMRLSGWTPDCV----TIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSL 285
Query: 72 IIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQ 131
+ Y K G ++ A + F NVV W M+ Y Q + +F M+ +GVR N+
Sbjct: 286 LDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNE 345
Query: 132 FTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER 191
FTY LR C + G I K F +++V L+D+Y+K GW++ A + E
Sbjct: 346 FTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEV 405
Query: 192 IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI 251
+E KDVVSW +MI G F ++ F+ M G+ PD L S + A G + +
Sbjct: 406 LEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQG 465
Query: 252 SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD 311
QIH + G + + +L+++YA+ G + A+ L+ ++ D I+ ++SGFA+
Sbjct: 466 QQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQS 525
Query: 312 DNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAV 371
+ +EA ++F M + + ++ AN+A + G+QIHA K + + V
Sbjct: 526 GLY-EEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEV 584
Query: 372 GNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGM 431
NALI +Y K G I DA F EM ++N +SW ++I ++HG+G EA++L+ +MK EG+
Sbjct: 585 ANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGL 644
Query: 432 VPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAY 491
PNDVTF+ +L ACSH GL EG F M +++ I PR +H++CVVD+ R GQL+ A
Sbjct: 645 KPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRAR 704
Query: 492 NMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAG 551
+ +M + A +W +L AC ++ N +GELAA+ L ++EP S +YV+LSN Y G
Sbjct: 705 KFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTG 764
Query: 552 AWDNARKTRKLMEERSLRKNPGYSFLQSSKKNIL 585
W RK+M++R +RK PG S+++ KN++
Sbjct: 765 KWACRDHVRKMMKDRGVRKEPGRSWIEV--KNVV 796
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 157/521 (30%), Positives = 267/521 (51%), Gaps = 7/521 (1%)
Query: 11 GQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTK 70
G+ L + C + P S+L C Q L+HA + G S +
Sbjct: 124 GEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNA 183
Query: 71 VIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
+I Y + G + A + F MP + V++ +IS +AQ G E+AL +F M SG +
Sbjct: 184 LIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPD 243
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE 190
T +S L ACA + L G+ + + K + ++ +LLDLY KCG I +A +F+
Sbjct: 244 CVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFK 303
Query: 191 RIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMK 250
+R +VV WN M+ SF LF M+ G++P+ FT +LR E+
Sbjct: 304 SGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINL 363
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR 310
QIH L IK G ES ++G LID+Y+KYG + A ++ + D++S T++I+G+ +
Sbjct: 364 GEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQ 423
Query: 311 DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA 370
+ KEA + FKDM L + D++ L ++ CA + ++ G+QIH+ + S D +
Sbjct: 424 HE-FCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVS 482
Query: 371 VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG 430
+ NAL+++YA+ G +A F+ + K+ I+W +++G+A+ G EA+E++ KM G
Sbjct: 483 IWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAG 542
Query: 431 MVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA 490
+ N TF+S + A ++ +G ++ +I K E + ++ L+ + G +E A
Sbjct: 543 VKYNVFTFVSSISASANLADIKQGKQIHATVI-KTGCTSETEVANALISLYGKCGSIEDA 601
Query: 491 YNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
+M+ + S W+ I+ +CS +G L A +LFD
Sbjct: 602 KMQFFEMSERNHVS-WNTIITSCSQHG----WGLEALDLFD 637
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 138/451 (30%), Positives = 237/451 (52%), Gaps = 4/451 (0%)
Query: 51 LIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
+IHA IT G + +I YAK G V AR+ F+++ R+ VSW AM+SGYA+NG
Sbjct: 63 VIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNG 122
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
E A+ ++ M SGV + SS L AC + + GR++ + K V +
Sbjct: 123 LGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGN 182
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
AL+ LY + G + A +F + D V++N +I A G + + +F M G P
Sbjct: 183 ALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTP 242
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
DC T+ S+L A +L K Q+H ++K G+ + GSL+D+Y K G I A +++
Sbjct: 243 DCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIF 302
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
+S +T+++ ++ + + + +K +FDLF M+ + ++ +L C +
Sbjct: 303 KSGDRTNVVLWNLMLVAYGQISDLAK-SFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEI 361
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
NLG QIH + K D V LIDMY+K G + A R + + K+V+SWTS+IAGY
Sbjct: 362 NLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGY 421
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM-INKYRILP 469
+H + EA+E +K M+ G+ P+++ S + AC+ +G ++ + + ++ Y
Sbjct: 422 VQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYS--A 479
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIK 500
++ +V+L+AR G+ + A+++ + K
Sbjct: 480 DVSIWNALVNLYARCGRSKEAFSLFEAIEHK 510
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 201/427 (47%), Gaps = 13/427 (3%)
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC--ARMRW-- 146
M R S ++G+ + E L +F+A +R ++ ALR C + W
Sbjct: 1 MTRRAAASLNKSLTGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFACALRECRGSVKHWPL 60
Query: 147 --LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
+ + I + + R NL L+DLYAK G ++ A +FE++ +D VSW AM+
Sbjct: 61 VPVIHAKAITCGLGEDRIAGNL-----LIDLYAKKGLVQRARRVFEQLSARDNVSWVAML 115
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G A G +++ L+ M G+ P + L S+L A + +H + K G
Sbjct: 116 SGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSC 175
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
S + +LI +Y ++GS+ A +++ M D ++ LIS A+ N + A ++F++
Sbjct: 176 SETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGN-GESALEIFEE 234
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M L D V + +L CA++ LN G+Q+H++ K S D + +L+D+Y K G
Sbjct: 235 MRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGV 294
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
I +A F NV+ W ++ Y + ++ +L+ +M G+ PN+ T+ LL
Sbjct: 295 IVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRT 354
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
C++ G G ++ I K ++D++++ G L+ A ++ + K S
Sbjct: 355 CTYAGEINLGEQIHLLSI-KTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVS 413
Query: 505 LWSAILG 511
S I G
Sbjct: 414 WTSMIAG 420
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 192/578 (33%), Positives = 327/578 (56%), Gaps = 9/578 (1%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ G +QALK + +P T+ ++L A + +H +I +G +S +
Sbjct: 170 QNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIF 229
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ ++ Y+K V A+ FD M RN VSW +MI+G+ NG D A +F M G
Sbjct: 230 VGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEG 289
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
V+ Q +++ ++ CA ++ + + + + K +L +K+AL+ Y+KC I+DA+
Sbjct: 290 VKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAF 349
Query: 187 ILFERIER-KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGG 245
LF + ++VVSW A+I G G D + LF M R+G++P+ FT +IL A+
Sbjct: 350 KLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAA- 408
Query: 246 IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALI 305
+ SQIH L++K E+S + +L D Y+K G A +++ + + DI++ +A++
Sbjct: 409 ---VSPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAML 465
Query: 306 SGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA-NVASLNLGRQIHAFAFKYQ 364
SG+A+ + + A +F + + + ++ +LN CA AS+ G+Q H+ + K
Sbjct: 466 SGYAQMGD-IEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSG 524
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
S V +AL+ MYAK G I AN F D++++SW S+I+GYA+HG G +++++++
Sbjct: 525 FSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFE 584
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
+M+ + + + +TF+ ++ AC+H GL EG F M+ Y I+P EH+SC+VDL++R
Sbjct: 585 EMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRA 644
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLS 544
G LE A ++I +M A++W +L AC ++ N LGELAA L ++P+ S YV+LS
Sbjct: 645 GMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLS 704
Query: 545 NIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
NIY AG W K RKLM+ + ++K GYS+++ K
Sbjct: 705 NIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNK 742
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 140/515 (27%), Positives = 266/515 (51%), Gaps = 15/515 (2%)
Query: 9 KTGQLKQALKFSLSC--PDTLLDPSTYMSLLQFC---IDKKAERQAHLIHAHIITNGYES 63
+ Q K+AL L + D S+ +L+ C D+ +Q +H I G+
Sbjct: 69 RNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQ---VHCQCIKCGFVE 125
Query: 64 NLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML 123
++ + T ++ Y K V + FD M +NVVSWT++++GY QNG +E AL +FS M
Sbjct: 126 DVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQ 185
Query: 124 RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIE 183
G++ N FT+++ L A ++ G + + K +FV ++++++Y+K +
Sbjct: 186 LEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVS 245
Query: 184 DAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV 243
DA +F+ +E ++ VSWN+MI G G + ++F LF M +G+K ++++
Sbjct: 246 DAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCA 305
Query: 244 GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT-DIISCT 302
E+ Q+H +IK G + + +L+ Y+K I A++L+ M +++S T
Sbjct: 306 NIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWT 365
Query: 303 ALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK 362
A+ISG+ + + + A +LF M + + + +L A V+ QIHA K
Sbjct: 366 AIISGYVQ-NGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSP----SQIHALVVK 420
Query: 363 YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIEL 422
+VG AL D Y+K G+ +A + F+ + +K++++W+++++GYA+ G A+++
Sbjct: 421 TNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKI 480
Query: 423 YKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFA 482
+ ++ EG+ PN+ TF S+L AC+ + E + F K S +V ++A
Sbjct: 481 FLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYA 540
Query: 483 RRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
+RG +ESA + ++ + S W++++ + +G
Sbjct: 541 KRGNIESANEVFKRQVDRDLVS-WNSMISGYAQHG 574
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/463 (27%), Positives = 243/463 (52%), Gaps = 35/463 (7%)
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
+++ FD P++ + ++ +++N ++ AL +F + RSG + + S L+ C
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
+ G+ + K FVE++ V ++L+D+Y K +ED +F+ + K+VVSW ++
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKL 261
+ G G N+ + LF M +G+KP+ FT ++L A+ G +E K Q+H ++IK
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVE--KGVQVHTMVIKS 222
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDL 321
GL+S+ + S++++Y+K + A ++ SM + +S ++I+GF + EAF+L
Sbjct: 223 GLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFV-TNGLDLEAFEL 281
Query: 322 FKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
F M L+ + + I ++ +CAN+ ++ +Q+H K S +D + AL+ Y+K
Sbjct: 282 FYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSK 341
Query: 382 SGEIADANRAFDEM-GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
EI DA + F M G +NV+SWT++I+GY ++G A+ L+ +M+ EG+ PN T+ +
Sbjct: 342 CSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYST 401
Query: 441 LLFACS-------HTGLTCEGWE----LFTDMINKYRILPRAEHFSCVVDL--------- 480
+L A + H + +E + T + + Y + A + + +L
Sbjct: 402 ILTANAAVSPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAW 461
Query: 481 ------FARRGQLESAYNMIRQM---NIKPTASLWSAILGACS 514
+A+ G +E A + Q+ ++P +S++L AC+
Sbjct: 462 SAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACA 504
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 187/553 (33%), Positives = 316/553 (57%), Gaps = 3/553 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T++++L +D A R+ IH+ + + + ++ ++T ++ Y K G + ARK FD M
Sbjct: 12 TFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGM 71
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P R+V +W +MIS Y+ + A +F M G R ++ T+ S L AC LQ G+
Sbjct: 72 PCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGK 131
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
++ SI + F +LFV +AL+ +YA+C E+A +F R+++K++++W+A+I A G
Sbjct: 132 HVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHG 191
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
++ FR M ++G+ P+ T S+L L ++S+IH LI + GL+ + ++
Sbjct: 192 HCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSN 251
Query: 272 SLIDVYAK--YGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+L++VY + G + A + + M + I + LI+G+ S+EA + ++ + L+
Sbjct: 252 ALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLH-GRSREALETYQRLQLEA 310
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ +D V +LN C + SL G+ IH+ A + D V NAL +MY+K G + +A
Sbjct: 311 IPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENAR 370
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
R FD M ++ +SW ++ YA+HG E ++L +KM+ EG+ N +TF+S+L +CSH G
Sbjct: 371 RIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAG 430
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
L EG + F + + I + EH+ C+VDL R G+L+ A I +M +P W+++
Sbjct: 431 LIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASL 490
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
LGAC ++ + G+LAAR L +++P S VVLSNIY+ G W NA K R+ M R ++
Sbjct: 491 LGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVK 550
Query: 570 KNPGYSFLQSSKK 582
K PG S +Q K
Sbjct: 551 KVPGISSIQVKNK 563
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 208/404 (51%), Gaps = 13/404 (3%)
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
ML GV+AN T+ + L + L+ G+ I +++ ++FV +AL++ Y KCG
Sbjct: 1 MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
+ DA +F+ + + V +WN+MI ++ + ++F++F+ M +G + D T SIL A
Sbjct: 61 LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC 301
V L + + I + E + +LI +YA+ S +A Q++ M + ++I+
Sbjct: 121 CVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITW 180
Query: 302 TALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF 361
+A+I+ FA D H EA F+ M + + + V +LN + L +IH
Sbjct: 181 SAIITAFA-DHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLIT 239
Query: 362 KYQSSYDAAVGNALIDMYAK--SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
++ + NAL+++Y + +GE+ A EM ++ + +W LI GY HG EA
Sbjct: 240 EHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREA 299
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI----NKYRILPRAEHFS 475
+E Y++++ E + + VTF+S+L AC+ + EG + ++ + + I+ A
Sbjct: 300 LETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNA---- 355
Query: 476 CVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNT 519
+ +++++ G +E+A + M I+ S W+ +L A + +G +
Sbjct: 356 -LTNMYSKCGSMENARRIFDSMPIRSAVS-WNGMLQAYAQHGES 397
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 190/389 (48%), Gaps = 5/389 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T++S+L C++ + + + I +E +L + T +I YA+ +A + F
Sbjct: 110 DRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVF 169
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
RM ++N+++W+A+I+ +A +G+ AL F M + G+ N+ T+ S L L+
Sbjct: 170 GRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLE 229
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKC--GWIEDAWILFERIERKDVVSWNAMIGG 206
I I + + + +AL+++Y +C G ++ A ++ + ++ + + +WN +I G
Sbjct: 230 ELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLING 289
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
+ G + ++ ++ + + + D T S+L A L + IH ++ GL+S
Sbjct: 290 YTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSD 349
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ +L ++Y+K GS+ +A +++ SM +S ++ +A+ S+E L + M
Sbjct: 350 VIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQ-HGESEEVLKLIRKME 408
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQ-IHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ + ++ + +L+ C++ + G Q H+ L+D+ ++G++
Sbjct: 409 QEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKL 468
Query: 386 ADANRAFDEM-GDKNVISWTSLIAGYAKH 413
+A + +M + +++W SL+ H
Sbjct: 469 QEAEKYISKMPSEPEIVTWASLLGACRVH 497
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 97/184 (52%), Gaps = 8/184 (4%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D T++S+L C + + +IH++ + G +S++ + + Y+K G + +AR+
Sbjct: 313 VDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRI 372
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD MP R+ VSW M+ YAQ+G E L + M + GV+ N T+ S L +C+ +
Sbjct: 373 FDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLI 432
Query: 148 QGGRMIQGSIQKGRFVENLFVKS----ALLDLYAKCGWIEDAWILFERIERK-DVVSWNA 202
G S+ R +E VK+ L+DL + G +++A ++ + ++V+W +
Sbjct: 433 AEGCQYFHSLGHDRGIE---VKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWAS 489
Query: 203 MIGG 206
++G
Sbjct: 490 LLGA 493
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 188/550 (34%), Positives = 305/550 (55%), Gaps = 3/550 (0%)
Query: 34 MSLLQFCIDK-KAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
+S L CI R + H +++ G+ + + +I FYAK + +A FDRMP
Sbjct: 413 LSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMP 472
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
++ +SW ++ISG NG + A+ +F M G + T S L ACAR + GR+
Sbjct: 473 HQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRV 532
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF 212
+ G K + + +ALLD+Y+ C +F + +K+VVSW AMI G
Sbjct: 533 VHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGL 592
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS 272
D L + M+ G+KPD F + S+L G L + +H I+ G+E + +
Sbjct: 593 FDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANA 652
Query: 273 LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI 332
L+++Y ++ A ++ + DIIS LI G++R+ N + E+F LF DM+L+
Sbjct: 653 LMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRN-NFANESFSLFSDMLLQ-FKP 710
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAF 392
+ V + +L A+++SL GR+IHA+A + D+ NAL+DMY K G + A F
Sbjct: 711 NTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLF 770
Query: 393 DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTC 452
D + KN+ISWT +IAGY HG G +A+ L+++M+ G+ P+ +F ++L+AC H+GLT
Sbjct: 771 DRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTA 830
Query: 453 EGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
EGW+ F M +Y+I P+ +H++C+VDL + G L+ A+ I M I+P +S+W ++L
Sbjct: 831 EGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHG 890
Query: 513 CSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNP 572
C I+ + L E A +F +EPE + YV+L+NIY A W+ +K + + R LR+N
Sbjct: 891 CRIHRDVKLAEKVADRVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENT 950
Query: 573 GYSFLQSSKK 582
G S+++ K
Sbjct: 951 GCSWIEVRGK 960
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 151/573 (26%), Positives = 265/573 (46%), Gaps = 51/573 (8%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH---------LSTKVIIFYA 76
T + T +S+L C + E ++H + + +G +L L +K++ Y
Sbjct: 295 TEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYV 354
Query: 77 KVGDVLSARKAFDRMPER-NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYS 135
K GD+ SAR+ FD MP + NV W ++ GYA+ E +LL+F M G+ ++ S
Sbjct: 355 KCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALS 414
Query: 136 SALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERK 195
L+ + + G + G + K F V +AL+ YAK I++A ++F+R+ +
Sbjct: 415 CLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQ 474
Query: 196 DVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIH 255
D +SWN++I G G N ++ LF M QG + D TL S+L A +H
Sbjct: 475 DTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVH 534
Query: 256 DLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHS 315
+K GL L +L+D+Y+ S Q++R+M + +++S TA+I+ + R
Sbjct: 535 GYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFD 594
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNAL 375
K A L ++M+L + D + +L+ A SL G+ +H +A + V NAL
Sbjct: 595 KVA-GLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANAL 653
Query: 376 IDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND 435
++MY + +A FD + +K++ISW +LI GY+++ + +E+ L+ M + PN
Sbjct: 654 MEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQ-FKPNT 712
Query: 436 VTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA----- 490
VT +L A + G E+ + + L + + +VD++ + G L A
Sbjct: 713 VTMTCILPAVASISSLERGREIHAYALRR-GFLEDSYTSNALVDMYVKCGALLVARVLFD 771
Query: 491 -----------------------------YNMIRQMNIKPTASLWSAILGACSIYGNTSL 521
+ +R ++P + +SAIL AC G T+
Sbjct: 772 RLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAE 831
Query: 522 GEL---AARNLFDMEPEKSVNYVVLSNIYTAAG 551
G A R + +EP K +Y + ++ + G
Sbjct: 832 GWKFFNAMRKEYKIEP-KLKHYTCIVDLLSHTG 863
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 149/521 (28%), Positives = 249/521 (47%), Gaps = 30/521 (5%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHII--TNGYESNLH 66
+ G L AL+ S D + +Y +++Q C ++++ A HA + T G ++
Sbjct: 75 QAGDLAAALRLLGS--DGGVGVRSYCAVVQLCGEERSLEAARRAHALVRAGTGGIIGSV- 131
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPER--NVVSWTAMISGYAQNGYDENALLVFSAMLR 124
L ++++ Y K GD+ AR FD MP R +V WT+++S YA+ G + + +F M
Sbjct: 132 LGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQC 191
Query: 125 SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIED 184
GV + S L+ A + + G +I G ++K E V +AL+ LY++CG +ED
Sbjct: 192 CGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMED 251
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG 244
A +F+ + +D +SWN+ I G G++D + LF M +G + T+ S+L A
Sbjct: 252 AMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAE 311
Query: 245 -GIELMKISQIHDLIIKLG----LES-----SNKLTGSLIDVYAKYGSIRSAYQLYRSML 294
G EL+ +H +K G LES L L+ +Y K G + SA +++ +M
Sbjct: 312 LGFELVG-KVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMP 370
Query: 295 KTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGR 354
+ LI G +E+ LF+ M + D+ L +L ++ G
Sbjct: 371 SKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGL 430
Query: 355 QIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG 414
H + K AV NALI YAKS I +A FD M ++ ISW S+I+G +G
Sbjct: 431 VAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNG 490
Query: 415 YGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT-----GLTCEGWELFTDMINKYRILP 469
EAIEL+ +M +G + T LS+L AC+ + G G+ + T +I + +
Sbjct: 491 LNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLA- 549
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
+ ++D+++ S + R M K S W+A++
Sbjct: 550 -----NALLDMYSNCSDWHSTNQIFRNMAQKNVVS-WTAMI 584
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 186/388 (47%), Gaps = 4/388 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD +T +S+L C ++H + + G L+ ++ Y+ D S +
Sbjct: 509 LDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQI 568
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F M ++NVVSWTAMI+ Y + G + + M+ G++ + F +S L A L
Sbjct: 569 FRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESL 628
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G+ + G + + L V +AL+++Y C +E+A ++F+ + KD++SWN +IGG
Sbjct: 629 KQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGY 688
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
+ F ++SF LF M+ Q KP+ T+ IL A L + +IH ++ G +
Sbjct: 689 SRNNFANESFSLFSDMLLQ-FKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDS 747
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ +L+D+Y K G++ A L+ + K ++IS T +I+G+ K+A LF+ M
Sbjct: 748 YTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGM-HGCGKDAVALFEQMRG 806
Query: 328 KKMGIDDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ D +L C + G + +A +Y+ ++D+ + +G +
Sbjct: 807 SGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLK 866
Query: 387 DANRAFDEMG-DKNVISWTSLIAGYAKH 413
+A + M + + W SL+ G H
Sbjct: 867 EAFEFIESMPIEPDSSIWVSLLHGCRIH 894
>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 840
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 188/553 (33%), Positives = 308/553 (55%), Gaps = 41/553 (7%)
Query: 30 PSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
PS Y S+L+ C +IH + I E+N+ ++T ++ Y+K +L A
Sbjct: 132 PSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYL 191
Query: 88 FDRMPER-NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
F +P+R N V WTAM++GYAQNG A+ F M G+ +N FT+ S L AC +
Sbjct: 192 FFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISA 251
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
GR + G I F N++V+SAL+D+YAKCG + A ++ + +E DVV WN+MI G
Sbjct: 252 YAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVG 311
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLES 265
G+ +++ LF M + ++ D FT S+L+ S+ + +KI + +H L IK G ++
Sbjct: 312 CVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLK-SLASCKNLKIGESVHSLTIKTGFDA 370
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
++ +L+D+YAK G++ A ++ +L D+IS T+L++G+ + H K A LF DM
Sbjct: 371 CKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEK-ALQLFCDM 429
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
++ +D ++ + + CA + + GRQ+HA K + + N+LI MYAK G +
Sbjct: 430 RTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCL 489
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
DA R FD M +NVISWT++I GYA++
Sbjct: 490 EDAIRVFDSMETRNVISWTAIIVGYAQN-------------------------------- 517
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
GL G F M Y I P ++H++C++DL R G++ A +++ +M+++P A++
Sbjct: 518 ---GLVETGQSYFESMEKVYGIKPASDHYACMIDLLGRAGKINEAEHLLNRMDVEPDATI 574
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
W ++L AC ++GN LGE A +NL +EP S+ YV+LSN+++ AG W++A R+ M+
Sbjct: 575 WKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKT 634
Query: 566 RSLRKNPGYSFLQ 578
+ K PGYS+++
Sbjct: 635 MGINKEPGYSWIE 647
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 188/389 (48%), Gaps = 37/389 (9%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
D +D TY S+L+ K + +H+ I G+++ +S ++ YAK G++ A
Sbjct: 332 DIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCA 391
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
F+++ +++V+SWT++++GY NG+ E AL +F M + V +QF + ACA +
Sbjct: 392 LDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAEL 451
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
++ GR + + K L +++L+ +YAKCG +EDA +F+ +E ++V+SW A+I
Sbjct: 452 TVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVFDSMETRNVISWTAII 511
Query: 205 GGLAMQGFNDDSFWLFRSMMR-QGMKP--DCFTLGSILRASVGGIELMKISQIHDLIIKL 261
G A G + F SM + G+KP D + L G KI++ L+ ++
Sbjct: 512 VGYAQNGLVETGQSYFESMEKVYGIKPASDHYACMIDLLGRAG-----KINEAEHLLNRM 566
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD--------IISCTALISGFARDDN 313
+E + SL+ +G++ + ++++K + ++S ++G D
Sbjct: 567 DVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAA 626
Query: 314 HSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN 373
H + A +K MGI N + + + Q+H F + +S AA
Sbjct: 627 HIRRA--------MKTMGI---------NKEPGYSWIEMKSQVHTFISEDRSHPLAAEIY 669
Query: 374 ALID----MYAKSGEIADANRAFDEMGDK 398
+ ID + ++G + D N A +M ++
Sbjct: 670 SKIDEMMILIKEAGHVPDMNFALRDMDEE 698
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 9/147 (6%)
Query: 368 DAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMK 427
D N +I YA G + +A + F+E KN I+W+SL++GY K+G E + + +M
Sbjct: 67 DKYTWNIMISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQMW 126
Query: 428 HEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEH----FSCVVDLFAR 483
+G P+ T S+L ACS L G MI+ Y I + E + +VD++++
Sbjct: 127 SDGQKPSQYTLGSVLRACSTLSLLHTG-----KMIHCYAIKIQLEANIFVATGLVDMYSK 181
Query: 484 RGQLESAYNMIRQMNIKPTASLWSAIL 510
L A + + + W+A+L
Sbjct: 182 CKCLLEAEYLFFSLPDRKNYVQWTAML 208
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 354 bits (908), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 192/552 (34%), Positives = 309/552 (55%), Gaps = 7/552 (1%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNG-YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPE 93
+LLQ + K+ QA +HAH+ T G N +L+TK+ YA G + A+ FD++
Sbjct: 27 TLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVL 86
Query: 94 RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMI 153
+N W +MI GYA N AL ++ ML G + + FTY L+AC + + GR +
Sbjct: 87 KNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKV 146
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN 213
+ G E+++V +++L +Y K G +E A ++F+R+ +D+ SWN M+ G G
Sbjct: 147 HALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEA 206
Query: 214 DDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG-- 271
+F +F M R G D TL ++L A ++L +IH +++ G ES G
Sbjct: 207 RGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNG-ESGRVCNGFL 265
Query: 272 --SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
S+ID+Y S+ A +L+ + D++S +LISG+ + + + +A +LF M++
Sbjct: 266 MNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGD-AFQALELFGRMVVVG 324
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
D+V + +L C +++L LG + ++ K + VG ALI MYA G + A
Sbjct: 325 AVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCAC 384
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
R FDEM +KN+ + T ++ G+ HG G EAI ++ +M +G+ P++ F ++L ACSH+G
Sbjct: 385 RVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSG 444
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
L EG E+F M Y + PR H+SC+VDL R G L+ AY +I M +KP +W+A+
Sbjct: 445 LVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTAL 504
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
L AC ++ N L ++A+ LF++ P+ YV LSNIY A W++ R L+ +R LR
Sbjct: 505 LSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVENVRALVAKRRLR 564
Query: 570 KNPGYSFLQSSK 581
K P YSF++ +K
Sbjct: 565 KPPSYSFVELNK 576
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 201/392 (51%), Gaps = 10/392 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY +L+ C D +HA ++ G E ++++ ++ Y K GDV +AR F
Sbjct: 123 DNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVF 182
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
DRM R++ SW M+SG+ +NG A VF M R G ++ T + L AC + L+
Sbjct: 183 DRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLK 242
Query: 149 GGRMIQGSI----QKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
G+ I G + + GR V N F+ ++++D+Y C + A LFE + KDVVSWN++I
Sbjct: 243 VGKEIHGYVVRNGESGR-VCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLI 301
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI-SQIHDLIIKLGL 263
G G + LF M+ G PD T+ S+L A+ I +++ + + ++K G
Sbjct: 302 SGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVL-AACNQISALRLGATVQSYVVKRGY 360
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
+ + +LI +YA GS+ A +++ M + ++ +CT +++GF +EA +F
Sbjct: 361 VVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGI-HGRGREAISIFY 419
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQI-HAFAFKYQSSYDAAVGNALIDMYAKS 382
+M+ K + D+ I +L+ C++ ++ G++I + Y + L+D+ ++
Sbjct: 420 EMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRA 479
Query: 383 GEIADANRAFDEMGDK-NVISWTSLIAGYAKH 413
G + +A + M K N WT+L++ H
Sbjct: 480 GYLDEAYAVIENMKLKPNEDVWTALLSACRLH 511
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 192/574 (33%), Positives = 324/574 (56%), Gaps = 7/574 (1%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K L+ A++F + C + + + LLQ + R+ IH +ITNG++SNL
Sbjct: 119 KNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLF 178
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
T V+ YAK + A K F+RMP+R++VSW +++GYAQNG+ A+ V M +G
Sbjct: 179 AMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAG 238
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
+ + T S L A A ++ L+ GR I G + F + V +A+LD Y KCG + A
Sbjct: 239 QKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSAR 298
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
++F+ + ++VVSWN MI G A G ++++F F M+ +G++P ++ L A
Sbjct: 299 LVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLG 358
Query: 247 ELMKISQIHDLI--IKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
+L + +H L+ K+G + S + SLI +Y+K + A ++ ++ +++ A+
Sbjct: 359 DLERGRYVHRLLDEKKIGFDVS--VMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAM 416
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
I G+A++ EA +LF +M + D L ++ A+++ + IH A +
Sbjct: 417 ILGYAQN-GCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTL 475
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
+ V ALID +AK G I A + FD M +++VI+W ++I GY +G+G EA++L+
Sbjct: 476 MDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFN 535
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
+M++ + PN++TFLS++ ACSH+GL EG F M Y + P +H+ +VDL R
Sbjct: 536 EMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRA 595
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLS 544
G+L+ A+ I+ M +KP ++ A+LGAC I+ N LGE A LFD++P+ +V+L+
Sbjct: 596 GRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLA 655
Query: 545 NIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
N+Y +A WD + R ME++ ++K PG S ++
Sbjct: 656 NMYASASMWDKVARVRTAMEKKGIQKTPGCSLVE 689
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 148/506 (29%), Positives = 258/506 (50%), Gaps = 16/506 (3%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
LL+ C K + H I II NG+ + TK+I + K + A + F+ + +
Sbjct: 50 LLELCTSLK---ELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKL 106
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG 155
V + M+ GYA+N +A+ + M V + ++ L+ L+ GR I G
Sbjct: 107 DVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHG 166
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD 215
+ F NLF +A+++LYAKC IEDA+ +FER+ ++D+VSWN ++ G A GF
Sbjct: 167 MVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARR 226
Query: 216 SFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKLTGSLI 274
+ + M G KPD TL S+L A V ++ ++I + IH + G E + +++
Sbjct: 227 AVQVVLQMQEAGQKPDSITLVSVLPA-VADLKALRIGRSIHGYAFRAGFEYMVNVATAML 285
Query: 275 DVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD 334
D Y K GS+RSA +++ M +++S +I G+A+ + S+EAF F M+ + + +
Sbjct: 286 DTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQ-NGESEEAFATFLKMLDEGVEPTN 344
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE 394
V + L+ CAN+ L GR +H + + +D +V N+LI MY+K + A F
Sbjct: 345 VSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGN 404
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG 454
+ K V++W ++I GYA++G +EA+ L+ +M+ + P+ T +S++ A + +T +
Sbjct: 405 LKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQA 464
Query: 455 WELFTDMINKYRILPRAEHFSC--VVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
+ I R L F C ++D A+ G +++A + M + + W+A++
Sbjct: 465 KWIHGLAI---RTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVIT-WNAMIDG 520
Query: 513 CSIYGNTSLGELAARNLFDMEPEKSV 538
YG G A +LF+ SV
Sbjct: 521 ---YGTNGHGR-EALDLFNEMQNGSV 542
>gi|255572826|ref|XP_002527345.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533264|gb|EEF35017.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 687
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 188/565 (33%), Positives = 319/565 (56%), Gaps = 10/565 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
++PS Y+ LLQ C K + +A +IHAHII G +L + T ++ YAK G + +ARK
Sbjct: 72 IEPSYYLPLLQECTKKNSVSEAQVIHAHIIKTGTHKDLAVMTSLVNVYAKCGAMGNARKI 131
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD + RNVV+WTA+++GY QN A+ VF ML SG + +T AL AC+ + +
Sbjct: 132 FDSLHRRNVVAWTALMTGYVQNSQPNIAIDVFQDMLESGTLPSNYTLGIALNACSAINSI 191
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G+ + + K + + + +AL LY+K G ++ + +F+ I K+V+SW A+I
Sbjct: 192 KLGKQLHAFVIKYKLDYDPSIGNALCSLYSKLGSLDSSINVFQSIGEKNVISWTAVISAC 251
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
G F M+ + +KP+ FTL ++L + L+ +H L IKLG + +
Sbjct: 252 GENGKAAMGLRFFNEMLLEDIKPNEFTLTTVLSLCCVTLALVLGRLVHSLSIKLGYQYNL 311
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG------FARDDNHSK----E 317
++T S++ +Y K G + A L+ M T++++ A+ISG A+DD ++ E
Sbjct: 312 RITNSIMYLYLKCGHMDEAQILFHKMGSTNLVTWNAMISGHAQAMDLAKDDFSAQRSGIE 371
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
A +F ++ D L +L +C+ +++L G Q+HA K D VG AL++
Sbjct: 372 ALSIFLELNRTGKKPDLFTLSSVLTVCSRLSALGQGEQLHAQTIKSGYLSDVVVGTALVN 431
Query: 378 MYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVT 437
MY+K G I A++AF EM + +ISWT++I G A+HG+ +A++L++ M+ G+ PN +T
Sbjct: 432 MYSKCGSIGKASKAFVEMSTRTLISWTTMITGLAQHGHSEQALQLFEDMRLAGVRPNQIT 491
Query: 438 FLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
F+ +L AC H+G+ E F M +YRI P +H+ C++ +F + +L+ A+++I +M
Sbjct: 492 FVGVLAACCHSGMVDEALGYFEMMQKEYRIKPVMDHYGCLIAMFVKLRRLDEAFDIINKM 551
Query: 498 NIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNAR 557
+ +P+ +WS ++ C G LG AA L ++ + + YV L N+Y +A W +
Sbjct: 552 DFEPSEFIWSILIAGCRNLGKQELGFYAAEQLLKLKLKDTETYVTLLNMYISAKRWQDVS 611
Query: 558 KTRKLMEERSLRKNPGYSFLQSSKK 582
+ RKLM+E L K +S++ +K
Sbjct: 612 RVRKLMKEEKLGKFNDWSWITIKEK 636
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 194/550 (35%), Positives = 308/550 (56%), Gaps = 36/550 (6%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
TY + +A + +HAH++ G + + K++ FY + G + +ARK FD++
Sbjct: 805 TYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKI 864
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P N+ W + A+ G+ E AL FS M + G+R NQF S L+AC + + G
Sbjct: 865 PNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGE 924
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ I K F + ++ SAL+ +Y+KCG +E A +F+ I KD+V NAM+ G A G
Sbjct: 925 NMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHG 984
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLESSNKL 269
F ++ L + M + G+KP+ + +++ + VG + +S++ L+ G+E
Sbjct: 985 FVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSM--VSEVFRLMTANGVEP---- 1038
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
D++S T++ISGF ++ H+ E FD FK+M+ +
Sbjct: 1039 ---------------------------DVVSWTSVISGFVQN-FHNHEGFDAFKEMLDQG 1070
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
V + +L C NVA+L G++IH +A D V +AL+DMYAK G I++A
Sbjct: 1071 FCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAK 1130
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
F M ++N ++W SLI GYA HGY +EAIEL+ +M+ + +TF ++L ACSH G
Sbjct: 1131 ILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAG 1190
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
+ G LF M KYRI PR EH++C+VDL R G+L AY++I+ M ++P +W A+
Sbjct: 1191 MVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGAL 1250
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
LGAC +GN L E+AA +LF++EPE + ++LSN+Y AG W NA K +K+M++R
Sbjct: 1251 LGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFG 1310
Query: 570 KNPGYSFLQS 579
K PG S++++
Sbjct: 1311 KFPGCSWIEA 1320
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 182/550 (33%), Positives = 300/550 (54%), Gaps = 4/550 (0%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
S L FC + H ++ G S+ + T +I YAK G+V SA + +D+M
Sbjct: 118 SALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSL 177
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
+ + +IS YA+NG+ A VF + G R N +TYS+ L C + +Q G+ +
Sbjct: 178 DAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLH 237
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND 214
+ K +++ V +ALL LY+KCG +E+A I+FE + +++++SW A I G G
Sbjct: 238 AHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFK 297
Query: 215 DSFWLFRSMMRQGMKPDCFTLGSILRASVGGI-ELMKISQIHDLIIKLGLESSNKLTGSL 273
+ F M G++P+ FT SI+ AS G + + + H +IK G+ S + ++
Sbjct: 298 KALKQFSMMRESGIEPNEFTF-SIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAI 356
Query: 274 IDVYAKYGSIRSAYQLYRSMLKT-DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI 332
ID+Y+ G + A + ++ M + +S ALI+G+ ++ K A + F M+ + +
Sbjct: 357 IDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEK-AMEAFCRMVKEDVAC 415
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAF 392
++ + C++ SL QIH+ K + V ++LI+ Y + G + +A + F
Sbjct: 416 NEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVF 475
Query: 393 DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTC 452
++ D +V+SW S+I Y+++G +AI L +KM EG P TFL++L ACSH+GL
Sbjct: 476 TQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQ 535
Query: 453 EGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
EG E F M+ Y I P H SC+VD+ R GQLE+A + I+++ +KPTAS+W +L A
Sbjct: 536 EGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAA 595
Query: 513 CSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNP 572
C N + E A + D+EP + YV LSN+Y G W +A R+LME++ + K P
Sbjct: 596 CRYNSNLQMAEYVAEKILDLEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQKEISKEP 655
Query: 573 GYSFLQSSKK 582
G S+++ + K
Sbjct: 656 GCSWIEVNNK 665
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 217/440 (49%), Gaps = 8/440 (1%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNG 60
++ A + G QA + + + P+ TY ++L C A ++ +HAH++
Sbjct: 185 LISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQ 244
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
Y S + ++ Y+K G + A F+ + +RN++SWTA I+G+ Q+G + AL FS
Sbjct: 245 YLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFS 304
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M SG+ N+FT+S L +C ++ GRM + K +FV +A++D+Y+ G
Sbjct: 305 MMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLG 364
Query: 181 WIEDAWILFERIER-KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
+++A F+++ R VSWNA+I G + + + F M+++ + + FT +I
Sbjct: 365 EMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIF 424
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
+A L QIH +IK +ES+ + SLI+ Y + GS+ +A Q++ + D++
Sbjct: 425 KACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVV 484
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQ-IHA 358
S ++I ++++ + K F L + MI + +L+ C++ + G++ +
Sbjct: 485 SWNSIIKAYSQNGDPWKAIF-LLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKS 543
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVIS-WTSLIAGYAKHGYGH 417
Y + + ++D+ ++G++ +A ++ K S W L+A ++
Sbjct: 544 MVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAA-CRYNSNL 602
Query: 418 EAIELYKKMKHEGMVPNDVT 437
+ E Y K + PND T
Sbjct: 603 QMAE-YVAEKILDLEPNDAT 621
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 204/613 (33%), Positives = 322/613 (52%), Gaps = 64/613 (10%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR------- 85
Y + L+FC + + Q +H II L +I Y K+GD+ +AR
Sbjct: 8 YTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIP 67
Query: 86 ------------------------KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSA 121
+ FD MP +VVSW +++SGYA NG ++ V++
Sbjct: 68 QPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNM 127
Query: 122 MLRSG-VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
ML+ G V N+ T+S+ L + ++ GR I G I K + LFV S L+D+YAK G
Sbjct: 128 MLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTG 187
Query: 181 WIEDAWILFERIERKDVV-------------------------------SWNAMIGGLAM 209
+I DA +FE I K++V SW +I GL
Sbjct: 188 FINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQ 247
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
G ++ F+ M +G D FT GS+L A G + L + QIH II+ + + +
Sbjct: 248 NGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFV 307
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+L+D+Y K +++ A ++R M ++IS TA++ G+ ++ +S+EA +F DM +
Sbjct: 308 GSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQN-GYSEEAVRIFCDMQRNE 366
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ DD L +++ CAN+ASL G Q H A V NALI +Y K G + A+
Sbjct: 367 IHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAH 426
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
+ F EM ++ +SWT+L++GYA+ G +E I L++ M G+VP+ VTF+ +L ACS G
Sbjct: 427 QLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAG 486
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
L +G+ F M+ ++RI P +H++C++DL +R G+LE A N I QM P A W+ +
Sbjct: 487 LVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATL 546
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
L +C + GN +G+ AA +L +EP+ +Y++LS+IY A G WD+ K RK M E ++
Sbjct: 547 LSSCRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVK 606
Query: 570 KNPGYSFLQSSKK 582
K PG+S+++ K
Sbjct: 607 KEPGHSWIKYKNK 619
>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 677
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 188/556 (33%), Positives = 320/556 (57%), Gaps = 9/556 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY + + + K+ + ++H I+ + + + ++ ++ Y G V AR F
Sbjct: 116 DGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVF 175
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D M R+V+SW MISGY +NGY +AL++F M+ V + T S L C ++ L+
Sbjct: 176 DVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLE 235
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
GR + +++ R + + VK+AL+++Y KCG +++A +F+R+ER+DV++W MI G
Sbjct: 236 MGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYT 295
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G +++ L R M +G++P+ T+ S++ +++ +H ++ + S
Sbjct: 296 EDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDII 355
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ SLI +YAK + ++++ K +A+I+G +++ S +A LFK M +
Sbjct: 356 IETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVS-DALGLFKRMRRE 414
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFK--YQSSYDAAVGNALIDMYAKSGEIA 386
+ + L +L A +A L IH + K + SS DAA G L+ +Y+K G +
Sbjct: 415 DVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATG--LVHVYSKCGTLE 472
Query: 387 DANRAFDEMGDK----NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
A++ F+ + +K +V+ W +LI+GY HG GH A++++ +M G+ PN++TF S L
Sbjct: 473 SAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSAL 532
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
ACSH+GL EG LF M+ Y+ L R+ H++C+VDL R G+L+ AYN+I + +PT
Sbjct: 533 NACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPT 592
Query: 503 ASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKL 562
+++W A+L AC + N LGE+AA LF++EPE + NYV+L+NIY A G W + K R +
Sbjct: 593 STVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSM 652
Query: 563 MEERSLRKNPGYSFLQ 578
ME LRK PG+S ++
Sbjct: 653 MENVGLRKKPGHSTIE 668
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/491 (25%), Positives = 252/491 (51%), Gaps = 8/491 (1%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y SLL ++ + +H H+IT G S H+ + + + YA G + ARK F+ MP
Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVITGGRVSG-HILSTLSVTYALCGHITYARKLFEEMP 76
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR--ANQFTYSSALRACARMRWLQGG 150
+ +++S+ +I Y + G +A+ VF M+ GV+ + +TY +A ++ ++ G
Sbjct: 77 QSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLG 136
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
++ G I + F + +V++ALL +Y G +E A +F+ ++ +DV+SWN MI G
Sbjct: 137 LVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRN 196
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
G+ +D+ +F M+ + + D T+ S+L +L +H L+ + L ++
Sbjct: 197 GYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVK 256
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
+L+++Y K G + A ++ M + D+I+ T +I+G+ D + + A +L + M + +
Sbjct: 257 NALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGD-VENALELCRLMQFEGV 315
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
+ V + ++++C + +N G+ +H +A + Q D + +LI MYAK + R
Sbjct: 316 RPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFR 375
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
F + W+++IAG ++ +A+ L+K+M+ E + PN T SLL A +
Sbjct: 376 VFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALAD 435
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA---YNMIRQMNIKPTASLWS 507
+ + + K + + + +V ++++ G LESA +N I++ + LW
Sbjct: 436 LRQAMNIHC-YLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWG 494
Query: 508 AILGACSIYGN 518
A++ ++G+
Sbjct: 495 ALISGYGMHGD 505
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 188/393 (47%), Gaps = 9/393 (2%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD +T +S+L C K +H + + + ++ Y K G + AR
Sbjct: 216 LDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFV 275
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FDRM R+V++WT MI+GY ++G ENAL + M GVR N T +S + C +
Sbjct: 276 FDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKV 335
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ + G + + ++ ++++L+ +YAKC ++ + +F + W+A+I G
Sbjct: 336 NDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGC 395
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
D+ LF+ M R+ ++P+ TL S+L A +L + IH + K G SS
Sbjct: 396 VQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSL 455
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLK----TDIISCTALISGFA-RDDNHSKEAFDLF 322
L+ VY+K G++ SA++++ + + D++ ALISG+ D H+ A +F
Sbjct: 456 DAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHN--ALQVF 513
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK-YQSSYDAAVGNALIDMYAK 381
+M+ + +++ LN C++ + G + F + Y++ + ++D+ +
Sbjct: 514 MEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGR 573
Query: 382 SGEIADANRAFDEMG-DKNVISWTSLIAGYAKH 413
+G + +A + + W +L+A H
Sbjct: 574 AGRLDEAYNLITTIPFEPTSTVWGALLAACVTH 606
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 201/578 (34%), Positives = 313/578 (54%), Gaps = 7/578 (1%)
Query: 3 IVRANFKTGQLKQALKFSLSC--PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
+V+ F L+ K C PD + T SLL C A + +H+H I G
Sbjct: 337 LVQQGFSDRALELFTKMQRDCLKPDCI----TVASLLSACASVGALHKGMQLHSHAIKAG 392
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+++ L ++ Y+K DV +A K F N+V W M+ Y Q ++ +F
Sbjct: 393 MSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFR 452
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M G+ NQFTY S LR C + L G I + K F N++V S L+D+YAK G
Sbjct: 453 QMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYG 512
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+ A + R+ DVVSW AMI G ++ LF M +G++ D S +
Sbjct: 513 QLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAIS 572
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
A G L + QIH G + + +LI +YA+ G I+ AY + + + IS
Sbjct: 573 ACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNIS 632
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
+L+SG A+ + +EA +F M+ + ++ ++ A++A++ G+QIH+
Sbjct: 633 WNSLVSGLAQS-GYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMV 691
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
K + V N+LI +YAKSG I+DA R F++M ++NVISW ++I GY++HG G EA+
Sbjct: 692 LKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEAL 751
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDL 480
L+++MK G++PN VTF+ +L ACSH GL EG + F M + ++P++EH+ CVVDL
Sbjct: 752 RLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDL 811
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNY 540
R GQL+ A I++M I A +W +L AC I+ N +GE AA +L ++EPE S Y
Sbjct: 812 LGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATY 871
Query: 541 VVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
V++SNIY + W + +RKLM++ ++K PG S+++
Sbjct: 872 VLISNIYAVSRQWIHRDWSRKLMKDXGVKKEPGRSWIE 909
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 164/555 (29%), Positives = 277/555 (49%), Gaps = 52/555 (9%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H +I G+ S ++ ++ Y++ ++SA + F M R+ VS+ ++ISG Q G+
Sbjct: 283 LHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGF 342
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ AL +F+ M R ++ + T +S L ACA + L G + K ++ ++ +
Sbjct: 343 SDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGS 402
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
LLDLY+KC +E A F E +++V WN M+ DSF +FR M +GM P+
Sbjct: 403 LLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPN 462
Query: 232 CFTLGSILRA--SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
FT SILR S+G + L + QIH +IK G + + + LID+YAKYG + A ++
Sbjct: 463 QFTYPSILRTCTSLGALYLGE--QIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRI 520
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
R + + D++S TA+I+G+ + D S EA LF++M + + D++ ++ CA + +
Sbjct: 521 LRRLPEDDVVSWTAMIAGYVQHDMFS-EALQLFEEMEYRGIQFDNIGFASAISACAGIRA 579
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
L G+QIHA ++ D ++ NALI +YA+ G I +A AF+++GDKN ISW SL++G
Sbjct: 580 LRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSG 639
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTF------------------------------- 438
A+ GY EA++++ +M N T+
Sbjct: 640 LAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSE 699
Query: 439 ----LSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI 494
SL+ + +G + W F DM + I ++ ++ +++ G A +
Sbjct: 700 REVSNSLISLYAKSGSISDAWREFNDMSERNVI-----SWNAMITGYSQHGCGMEALRLF 754
Query: 495 RQMN---IKPTASLWSAILGACSIYGNTSLGELAARNLF---DMEPEKSVNYVVLSNIYT 548
+M I P + +L ACS G G ++F D+ P KS +YV + ++
Sbjct: 755 EEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVP-KSEHYVCVVDLLG 813
Query: 549 AAGAWDNARKTRKLM 563
AG D A + K M
Sbjct: 814 RAGQLDRAMEYIKEM 828
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 142/494 (28%), Positives = 262/494 (53%), Gaps = 18/494 (3%)
Query: 32 TYMSLLQFCIDKK-AERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
T+ +L+ C+ A +H+ G++S+ ++ +I Y+K G + SA+K F+
Sbjct: 161 TFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNC 220
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+ +++V+W AMISG +QNG +E A+L+F M S + + SS L A +++ + G
Sbjct: 221 ICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELG 280
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ + K F +V + L+ LY++ + A +F + +D VS+N++I GL Q
Sbjct: 281 EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQ 340
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
GF+D + LF M R +KPDC T+ S+L A L K Q+H IK G+ + L
Sbjct: 341 GFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILE 400
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
GSL+D+Y+K + +A++ + +I+ ++ + + DN S ++F++F+ M ++ M
Sbjct: 401 GSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLS-DSFEIFRQMQMEGM 459
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
+ +L C ++ +L LG QIH K + V + LIDMYAK G++A A R
Sbjct: 460 IPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALR 519
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
+ + +V+SWT++IAGY +H EA++L+++M++ G+ +++ F S + AC+
Sbjct: 520 ILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRA 579
Query: 451 TCEGWELFTDMINKYRILPRAEHF-------SCVVDLFARRGQLESAYNMIRQMNIKPTA 503
+G ++ A F + ++ L+AR G+++ AY ++ K
Sbjct: 580 LRQGQQIHAQ--------SYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNI 631
Query: 504 SLWSAILGACSIYG 517
S W++++ + G
Sbjct: 632 S-WNSLVSGLAQSG 644
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 138/488 (28%), Positives = 248/488 (50%), Gaps = 18/488 (3%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y+ LL+ C+ + + +H I +G++ L ++ Y + GD A K FD
Sbjct: 61 YLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENS 120
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
R+V SW MI + + +F ML G+ N +T++ L+AC GG +
Sbjct: 121 NRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACV------GGDI 174
Query: 153 IQGSIQKGR-------FVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
+++ F + V + L+DLY+K G+IE A +F I KD+V+W AMI
Sbjct: 175 AFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMIS 234
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI-SQIHDLIIKLGLE 264
GL+ G +++ LF M + P + L S+L AS I+L ++ Q+H L+IK G
Sbjct: 235 GLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSAST-KIQLFELGEQLHCLVIKWGFH 293
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
S + L+ +Y++ + SA +++ +M D +S +LISG + S A +LF
Sbjct: 294 SETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQ-QGFSDRALELFTK 352
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M + D + + +L+ CA+V +L+ G Q+H+ A K S D + +L+D+Y+K +
Sbjct: 353 MQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCAD 412
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ A++ F +N++ W ++ Y + ++ E++++M+ EGM+PN T+ S+L
Sbjct: 413 VETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRT 472
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
C+ G G ++ T +I K S ++D++A+ GQL A ++R++ S
Sbjct: 473 CTSLGALYLGEQIHTHVI-KTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVS 531
Query: 505 LWSAILGA 512
W+A++
Sbjct: 532 -WTAMIAG 538
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 132/481 (27%), Positives = 221/481 (45%), Gaps = 39/481 (8%)
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
M GVR+N Y L C L + I K F + +L+D Y + G
Sbjct: 49 MEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGD 108
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
A +F+ + V SWN MI Q N F LFR M+ +G+ P+ +T +L+A
Sbjct: 109 QHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKA 168
Query: 242 SVGG-IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
VGG I + Q+H G +SS + LID+Y+K G I SA +++ + DI++
Sbjct: 169 CVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVT 228
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
A+ISG ++ + +EA LF DM ++ +L +L+ + LG Q+H
Sbjct: 229 WVAMISGLSQ-NGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLV 287
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
K+ + V N L+ +Y++S ++ A R F M ++ +S+ SLI+G + G+ A+
Sbjct: 288 IKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRAL 347
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI------------------ 462
EL+ KM+ + + P+ +T SLL AC+ G +G +L + I
Sbjct: 348 ELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLY 407
Query: 463 ---------NKYRILPRAEHFSCVVDLFARRGQLES---AYNMIRQMNIK---PTASLWS 507
+K+ + E+ + GQL++ ++ + RQM ++ P +
Sbjct: 408 SKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYP 467
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYV--VLSNIYTAAGAWDNA-RKTRKLME 564
+IL C+ G LGE ++ + +V YV VL ++Y G A R R+L E
Sbjct: 468 SILRTCTSLGALYLGEQIHTHVIKTGFQLNV-YVCSVLIDMYAKYGQLALALRILRRLPE 526
Query: 565 E 565
+
Sbjct: 527 D 527
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 139/308 (45%), Gaps = 7/308 (2%)
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
L M+ L M +G++ + +L + L + ++H I K G +
Sbjct: 33 LHMEQGKSKRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGE 92
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
L SL+D Y ++G A +++ + S +I F ++ + F LF+ M+
Sbjct: 93 PLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNF-QVFCLFRRML 151
Query: 327 LKKMGIDDVILCLMLNIC-ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ + + +L C + N +Q+H+ F Y V N LID+Y+K+G I
Sbjct: 152 AEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYI 211
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A + F+ + K++++W ++I+G +++G EAI L+ M + P S+L A
Sbjct: 212 ESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSAS 271
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSC--VVDLFARRGQLESAYNMIRQMNIKPTA 503
+ L G +L ++ K+ +E + C +V L++R +L SA + MN +
Sbjct: 272 TKIQLFELGEQLHC-LVIKWGF--HSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGV 328
Query: 504 SLWSAILG 511
S S I G
Sbjct: 329 SYNSLISG 336
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 189/555 (34%), Positives = 305/555 (54%), Gaps = 2/555 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY S+L+ C +IH ++ G ++ + + ++ YAK A F
Sbjct: 105 DSYTYPSVLKACGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLF 164
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ MPE++V W +IS Y Q+G + AL F M R G N T ++A+ +CAR+ L
Sbjct: 165 NEMPEKDVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLN 224
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G I + F+ + F+ SAL+D+Y KCG +E A +FE++ +K VV+WN+MI G
Sbjct: 225 RGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYG 284
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
++G + LF+ M +G+KP TL S++ L++ +H I+ ++S
Sbjct: 285 LKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVF 344
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ SL+D+Y K G + A +++ + K+ ++S +ISG+ + EA LF +M
Sbjct: 345 INSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLF-EALGLFSEMRKS 403
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ D + +L C+ +A+L G +IH + + + V AL+DMYAK G + +A
Sbjct: 404 YVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEA 463
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
F + ++++SWTS+I Y HG + A+EL+ +M M P+ VTFL++L AC H
Sbjct: 464 FSVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHA 523
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQ-MNIKPTASLWS 507
GL EG F M+N Y I+PR EH+SC++DL R G+L AY +++Q I+ L S
Sbjct: 524 GLVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLS 583
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
+ AC ++ N LG AR L D +P+ S Y++LSN+Y +A WD R R M+E
Sbjct: 584 TLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELG 643
Query: 568 LRKNPGYSFLQSSKK 582
L+KNPG S+++ ++K
Sbjct: 644 LKKNPGCSWIEINQK 658
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 135/521 (25%), Positives = 263/521 (50%), Gaps = 7/521 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D + LL+ C++ K+ +Q LIH ++T G ++++ L +I Y A+
Sbjct: 1 MDTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCV 60
Query: 88 FDRMPERNVVS-WTAMISGYAQNGYDENALLVFSAMLRSG-VRANQFTYSSALRACARMR 145
FD M +S W +++GY +N AL +F +L ++ + +TY S L+AC +
Sbjct: 61 FDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLY 120
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
G+MI + K + ++ V S+L+ +YAKC E A LF + KDV WN +I
Sbjct: 121 KYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVIS 180
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
G ++ F M R G +P+ T+ + + + ++L + +IH+ +I G
Sbjct: 181 CYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLL 240
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ ++ +L+D+Y K G + A +++ M K +++ ++ISG+ + S LFK M
Sbjct: 241 DSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGD-SISCIQLFKRM 299
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ + L ++ +C+ A L G+ +H + + + D + ++L+D+Y K G++
Sbjct: 300 YNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKV 359
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A F + V+SW +I+GY G EA+ L+ +M+ + P+ +TF S+L AC
Sbjct: 360 ELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTAC 419
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
S +G E+ +I K ++ ++D++A+ G ++ A+++ + + + S
Sbjct: 420 SQLAALEKGEEIHNLIIEK-KLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVS- 477
Query: 506 WSAILGACSIYGNTSLG-ELAARNL-FDMEPEKSVNYVVLS 544
W++++ A +G + EL A L +M+P++ +LS
Sbjct: 478 WTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILS 518
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 124/447 (27%), Positives = 223/447 (49%), Gaps = 37/447 (8%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITN 59
++ +++G K+AL++ +P+ T + + C + IH +I +
Sbjct: 177 TVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINS 236
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G+ + +S+ ++ Y K G + A + F++MP++ VV+W +MISGY G + + +F
Sbjct: 237 GFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLF 296
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
M GV+ T SS + C+R L G+ + G + R ++F+ S+L+DLY KC
Sbjct: 297 KRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKC 356
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G +E A +F+ I + VVSWN MI G +G ++ LF M + ++PD T S+L
Sbjct: 357 GKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVL 416
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
A L K +IH+LII+ L+++ + G+L+D+YAK G++ A+ +++ + K D++
Sbjct: 417 TACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLV 476
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
S T++I+ + + A +LF +M+ M D V +L+ C + ++ G +
Sbjct: 477 SWTSMITAYG-SHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEG----CY 531
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
F N ++++Y G I V ++ LI + G HEA
Sbjct: 532 YF-----------NQMVNVY---GIIP------------RVEHYSCLIDLLGRAGRLHEA 565
Query: 420 IELYKKMKHEGMVPNDVTFLSLLF-AC 445
E+ ++ + +DV LS LF AC
Sbjct: 566 YEI---LQQNPEIRDDVELLSTLFSAC 589
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 186/544 (34%), Positives = 310/544 (56%), Gaps = 8/544 (1%)
Query: 53 HAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYD 112
HA I ++ + + ++ Y K G + AR+ FDRMPERN V+W MISGYA
Sbjct: 134 HAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLA 193
Query: 113 ENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSAL 172
A VF M R N+F ++S L A A ++ G+ I K + L + +AL
Sbjct: 194 GEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNAL 253
Query: 173 LDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDC 232
+ +YAKCG ++D+ +FE K+ ++W+AMI G A G + + LF M G+ P
Sbjct: 254 VTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSE 313
Query: 233 FTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRS 292
FTL +L A + + Q+H+ ++KLG ES + +L+D+YAK G A + +
Sbjct: 314 FTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNY 373
Query: 293 MLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNL 352
+ + D++ T++I+G+ ++ +++A L+ M ++ + +++ + +L C+N+A+ +
Sbjct: 374 LQQPDLVLWTSMIAGYVQN-GENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQ 432
Query: 353 GRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAK 412
GRQIHA KY + +G+AL MYAK G + + N F M ++++ISW ++I+G ++
Sbjct: 433 GRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQ 492
Query: 413 HGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAE 472
+GYG EA+EL+++M+ + P+DVTF+++L ACSH GL GW F M +++ +LP+ E
Sbjct: 493 NGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVE 552
Query: 473 HFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDM 532
H++C+VD+ +R G+L A I I LW +LGAC Y N LG A L ++
Sbjct: 553 HYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYELGAYAGEKLMEL 612
Query: 533 EPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKNILL------ 586
++S YV+LS IYTA G ++ + R +M+ R + K PG S+++ K N+ +
Sbjct: 613 GSQESSAYVLLSGIYTALGRPEDVERVRSMMKVRGVSKEPGCSWIE-LKSNVHVFVVGDQ 671
Query: 587 LEPC 590
+ PC
Sbjct: 672 MHPC 675
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 152/519 (29%), Positives = 271/519 (52%), Gaps = 9/519 (1%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESN-LHLSTKVIIFYAKVGDVLSARKAFD 89
S++ SL+QF +K+ ++ +HA II S+ ++L+ +I FYAK + A+ FD
Sbjct: 9 SSFNSLVQF-THQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFD 67
Query: 90 RMPERNVVSWTAMISGYAQNGYDENALL--VFSAMLRSGVRANQFTYSSALRACARMRWL 147
R+ ++V+SW +I+GY+Q G ++ + +F M + N T+S A + + +
Sbjct: 68 RIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSI 127
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ K ++FV S+LL++Y K G + +A +F+R+ ++ V+W MI G
Sbjct: 128 FFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGY 187
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A+Q ++F +F M R+ + F S+L A + QIH L +K GL
Sbjct: 188 AIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFL 247
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ +L+ +YAK GS+ + Q++ + I+ +A+I+G+A+ + S +A LF M
Sbjct: 248 SILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGD-SHKALKLFSRMHF 306
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ + L +LN C++ ++ G+Q+H + K + AL+DMYAKSG D
Sbjct: 307 AGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTED 366
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A + F+ + +++ WTS+IAGY ++G +A+ LY +M+ EG++PN++T S+L ACS+
Sbjct: 367 ARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSN 426
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
+G ++ I KY + S + ++A+ G LE + R+M + S W+
Sbjct: 427 LAAFDQGRQIHARTI-KYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIIS-WN 484
Query: 508 AILGACSI--YGNTSLGELAARNLFDMEPEKSVNYVVLS 544
A++ S YG +L D +P+ VLS
Sbjct: 485 AMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLS 523
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 166/302 (54%), Gaps = 1/302 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IH + G L + ++ YAK G + + + F+ ++N ++W+AMI+GYAQ+G
Sbjct: 234 IHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGD 293
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
AL +FS M +G+ ++FT L AC+ ++ G+ + + K F L++ +A
Sbjct: 294 SHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTA 353
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+D+YAK G EDA F +++ D+V W +MI G G N+D+ L+ M +G+ P+
Sbjct: 354 LVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPN 413
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
T+ S+L+A + QIH IK GL + +L +YAK G++ ++R
Sbjct: 414 ELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFR 473
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
M + DIIS A+ISG ++ + + KEA +LF++M + DDV +L+ C+++ ++
Sbjct: 474 RMPERDIISWNAMISGLSQ-NGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVD 532
Query: 352 LG 353
G
Sbjct: 533 SG 534
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 133/235 (56%), Gaps = 2/235 (0%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
++G +ALK ++PS T + +L C D A + +H +++ G+ES L+
Sbjct: 290 QSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLY 349
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ T ++ YAK G ARK F+ + + ++V WT+MI+GY QNG +E+AL ++ M G
Sbjct: 350 IMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEG 409
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
+ N+ T +S L+AC+ + GR I K + + SAL +YAKCG +E+
Sbjct: 410 ILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGN 469
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
I+F R+ +D++SWNAMI GL+ G+ ++ LF M +Q KPD T ++L A
Sbjct: 470 IVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSA 524
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 193/620 (31%), Positives = 337/620 (54%), Gaps = 55/620 (8%)
Query: 21 LSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGD 80
LS D +D STY SLL+ C +Q +HAH + G+ + + TK++ Y + G
Sbjct: 53 LSLLDKQIDSSTYASLLESCRTLNLGKQ---VHAHTLKTGFHGHEFVETKLLQMYGRFGC 109
Query: 81 VLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRA 140
+ A F +MP+RN+ SWTA++S + +GY E AL +F + + F + L+
Sbjct: 110 LDDANLVFVKMPQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKL 169
Query: 141 CARMRWLQGGRMIQGSIQK-------------GRFVENLFVKSALLDLYAKCGWIEDAWI 187
C +R L+ GR + G + K G V+N+ + ++ Y + G +E A
Sbjct: 170 CGGLRVLELGRQLHGVVIKRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKE 229
Query: 188 LFERIE--RKDVVSWNAMIGGLAMQGFNDDSFWLFRSM-MRQGMKPDCFTLGSILRASVG 244
LF+++E KD +SWN+MI G A D++ +FR + M +G++ D FTLGS+L A
Sbjct: 230 LFDQMELVGKDTISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACAD 289
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
L + ++H + GL + + G+L+++Y+K +++A + + + D + L
Sbjct: 290 MASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDGVTERDTATWNVL 349
Query: 305 ISGFA----------------------------------RDDNHSKEAFDLFKDMILKKM 330
ISG+A ++ H++ A LF +M +
Sbjct: 350 ISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTSSL 409
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
D + ++L CA +A++ G+Q+HA + + D +G AL+DMYAK G I A +
Sbjct: 410 RPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQ 469
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
++ + + N++S +++ YA HG+G E I L++ M G P+ VTFLS+L +C H G
Sbjct: 470 VYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGA 529
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
G E F D++ Y + P +H++C+VDL +R G+L+ AY +++++ KP + +W A+L
Sbjct: 530 VETGHEFF-DLMTYYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGALL 588
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
G C I+GN LGE+AA +L ++EP + NYV+L+N+Y AG W + +TR+++++R + K
Sbjct: 589 GGCVIWGNVELGEIAAESLIELEPNNTGNYVLLANLYAYAGRWHDLDRTRQMIKDRGMHK 648
Query: 571 NPGYSFLQSSKKNILLLEPC 590
+PG S+++ +++I + C
Sbjct: 649 SPGCSWIE-DREDIHVFLSC 667
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 187/554 (33%), Positives = 318/554 (57%), Gaps = 9/554 (1%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGY-ESNLHLSTKVIIFYAK---VGDVLSARKAF 88
+ ++++ C+ + + ++ GY +S++ + ++I + K + D+ SARK F
Sbjct: 159 FTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVF 218
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAML-RSGVRANQFTYSSALRACARMRWL 147
D+M E+NVV+WT MI+ AQ GY++ A+ +F ML SG ++FT + + CA +++L
Sbjct: 219 DKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFL 278
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ + + + V +L V +L+D+YAKCG +++A +F+ + +V+SW A++ G
Sbjct: 279 SLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGY 338
Query: 208 AMQG--FNDDSFWLFRSMMRQG-MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G + ++ +F +M+ QG + P+CFT +L+A + Q+H IKLGL
Sbjct: 339 VRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLS 398
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ + + L+ VYAK G + SA + + + + +++S T + +D N + E DL ++
Sbjct: 399 AIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQ-DLDRE 457
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
+ G+ +L+ A + ++ G QIHA K D +V NALI MY+K G
Sbjct: 458 VEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGN 517
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
A + F++M D NVI+WTS+I G+AKHG+ +A+EL+ M G+ PNDVT++++L A
Sbjct: 518 KEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSA 577
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
CSH GL E W+ FT M + + I+PR EH++C+VDL R G L A I M A
Sbjct: 578 CSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADAL 637
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
+W LG+C ++ NT LGE AA+ + + EP Y++LSN+Y G W++ RK M+
Sbjct: 638 VWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYATEGRWEDVAAIRKNMK 697
Query: 565 ERSLRKNPGYSFLQ 578
++ + K G S+++
Sbjct: 698 QKQITKEAGSSWIE 711
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 145/527 (27%), Positives = 265/527 (50%), Gaps = 47/527 (8%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP--E 93
LL+ CI K L+H + T+ + L +I Y+K D ++A F M +
Sbjct: 58 LLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSK 117
Query: 94 RNVVSWTAMISGYAQNGYDENALLVFSA-MLRSGVRANQFTYSSALRACARMRWLQGGRM 152
R+VVS++++IS +A N A+ +F +L+ GV N++ +++ +RAC + + + G
Sbjct: 118 RDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLC 177
Query: 153 IQGSIQK-GRFVENLFVKSALLDLYAK-CGW--IEDAWILFERIERKDVVSWNAMIGGLA 208
+ G + K G F ++ V L+D++ K C +E A +F+++ K+VV+W MI LA
Sbjct: 178 LFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLA 237
Query: 209 MQGFNDDSFWLFRSMM-RQGMKPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLGLESS 266
G+ND++ LF M+ G PD FTL ++ + I+ + + ++H +I+ GL
Sbjct: 238 QYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLI-SVCAEIQFLSLGKELHSWVIRSGLVLD 296
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR-DDNHSKEAFDLFKDM 325
+ SL+D+YAK G ++ A +++ M + +++S TAL++G+ R + +EA +F +M
Sbjct: 297 LCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNM 356
Query: 326 ILK-KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
+L+ + + +L CA++ + G Q+H K S VGN L+ +YAKSG
Sbjct: 357 LLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGR 416
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ A + FD + +KN++S T + K + +L +++++ G + T+ SLL
Sbjct: 417 MESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSG 476
Query: 445 CSHTGLTCEGWELF---------TD------MINKYRILPRAE---------------HF 474
+ G +G ++ TD +I+ Y E +
Sbjct: 477 AACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITW 536
Query: 475 SCVVDLFARRG----QLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
+ +++ FA+ G LE YNM+ + +KP + A+L ACS G
Sbjct: 537 TSIINGFAKHGFASKALELFYNML-ETGVKPNDVTYIAVLSACSHVG 582
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 213/432 (49%), Gaps = 27/432 (6%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T L+ C + + +H+ +I +G +L + ++ YAK G V ARK F
Sbjct: 261 DRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVF 320
Query: 89 DRMPERNVVSWTAMISGYAQ--NGYDENALLVFSAM-LRSGVRANQFTYSSALRACARMR 145
D M E NV+SWTA+++GY + GY+ A+ +FS M L+ GV N FT+S L+ACA +
Sbjct: 321 DGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLP 380
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
G + G K V + L+ +YAK G +E A F+ + K++VS ++
Sbjct: 381 DFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVS-ETVVD 439
Query: 206 GLAMQGFNDDSFW-LFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
++ FN +S L R + G FT S+L + + K QIH +++K+G
Sbjct: 440 DTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFR 499
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ + +LI +Y+K G+ +A Q++ M ++I+ T++I+GFA+ SK A +LF +
Sbjct: 500 TDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASK-ALELFYN 558
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG--------NALI 376
M+ + +DV +L+ C++V ++ A+K+ +S G ++
Sbjct: 559 MLETGVKPNDVTYIAVLSACSHVGLIDE-------AWKHFTSMRDNHGIVPRMEHYACMV 611
Query: 377 DMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKH---GYGHEAIELYKKMKHEGMV 432
D+ +SG +++A + M D + + W + + H G A ++ ++ E
Sbjct: 612 DLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMI--LEREPHD 669
Query: 433 PNDVTFLSLLFA 444
P LS L+A
Sbjct: 670 PATYILLSNLYA 681
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 197/373 (52%), Gaps = 21/373 (5%)
Query: 133 TYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI 192
T S L+ C R + G+++ + + + ++L+ LY+K A+ +F+ +
Sbjct: 54 TSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSM 113
Query: 193 E--RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ-GMKPDCFTLGSILRASVGGIELM 249
E ++DVVS++++I A + +F ++ Q G+ P+ + +++RA + G
Sbjct: 114 ENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFK 173
Query: 250 KISQIHDLIIKLGLESSNKLTG-SLIDVYAK---YGSIRSAYQLYRSMLKTDIISCTALI 305
+ ++K G S+ G LID++ K + SA +++ M + ++++ T +I
Sbjct: 174 TGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMI 233
Query: 306 SGFARDDNHSKEAFDLFKDMILKKMGIDD-VILCLMLNICANVASLNLGRQIHAFAFKYQ 364
+ A+ ++ EA DLF +M++ + D L ++++CA + L+LG+++H++ +
Sbjct: 234 TRLAQ-YGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSG 292
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH--EAIEL 422
D VG +L+DMYAK G + +A + FD M + NV+SWT+L+ GY + G G+ EA+ +
Sbjct: 293 LVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRM 352
Query: 423 YKKMKHEGMV-PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV---- 477
+ M +G V PN TF +L AC+ + ++ F + ++ I CV
Sbjct: 353 FSNMLLQGGVAPNCFTFSGVLKACA----SLPDFD-FGEQVHGQTIKLGLSAIDCVGNGL 407
Query: 478 VDLFARRGQLESA 490
V ++A+ G++ESA
Sbjct: 408 VSVYAKSGRMESA 420
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 90/186 (48%), Gaps = 9/186 (4%)
Query: 339 LMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD- 397
L+L C + +LG+ +H D + N+LI +Y+KS + A F M +
Sbjct: 57 LLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENS 116
Query: 398 -KNVISWTSLIAGYAKHGYGHEAIELYKK-MKHEGMVPNDVTFLSLLFACSHTGLTCEGW 455
++V+S++S+I+ +A + +A+E++ + + +G+ PN+ F +++ AC G G
Sbjct: 117 KRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGL 176
Query: 456 ELFTDMINKYRILPRAEHFSC-VVDLFARR---GQLESAYNMIRQMNIKPTASLWSAILG 511
LF + K C ++D+F + LESA + +M K + W+ ++
Sbjct: 177 CLF-GFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVT-WTLMIT 234
Query: 512 ACSIYG 517
+ YG
Sbjct: 235 RLAQYG 240
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 194/550 (35%), Positives = 311/550 (56%), Gaps = 4/550 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ +LL+ C + +HA + G S ST + Y K AR+ FDRM
Sbjct: 18 TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAML--RSGVRANQFTYSSALRACARMRWLQG 149
P R+ V+W A+++GYA+NG +A+ M G R + T S L ACA R L
Sbjct: 78 PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHA 137
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
R + + E + V +A+LD Y KCG +E A +F+ + ++ VSWNAMI G A
Sbjct: 138 CREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYAD 197
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
G ++ LF M+++G+ ++ + L+A L ++ ++H+L++++GL S+ +
Sbjct: 198 NGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSV 257
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSML-KTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
T +LI YAK A Q++ + K IS A+I GF +++ ++A LF M L+
Sbjct: 258 TNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNEC-PEDAERLFARMQLE 316
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ D L ++ A+++ R IH ++ ++Q D V ALIDMY+K G ++ A
Sbjct: 317 NVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIA 376
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
R FD D++VI+W ++I GY HG+G A+EL+++MK G +PN+ TFLS+L ACSH
Sbjct: 377 RRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHA 436
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
GL EG + F M Y + P EH+ +VDL R G+L+ A++ I+ M I+P S++ A
Sbjct: 437 GLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGA 496
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+LGAC ++ N L E +A+ +F++ PE+ V +V+L+NIY A W + + R ME++ L
Sbjct: 497 MLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAMEKKGL 556
Query: 569 RKNPGYSFLQ 578
+K PG+S +Q
Sbjct: 557 QKTPGWSIIQ 566
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 182/365 (49%), Gaps = 9/365 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T +S+L C D +A +HA + G + +++ST V+ Y K G V +AR F
Sbjct: 118 DSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVF 177
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D MP RN VSW AMI GYA NG A+ +F M++ GV + +AL+AC + +L
Sbjct: 178 DCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLD 237
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI-ERKDVVSWNAMIGGL 207
R + + + N+ V +AL+ YAKC + A +F + +K +SWNAMI G
Sbjct: 238 EVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGF 297
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
+D+ LF M + ++PD FTL S++ A + ++ IH I+ L+
Sbjct: 298 TQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDV 357
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ +LID+Y+K G + A +L+ S +I+ A+I G+ + A +LF++M
Sbjct: 358 YVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYG-SHGFGQAAVELFEEMKG 416
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG----NALIDMYAKSG 383
++ +L C++ ++ G++ A + Y G ++D+ ++G
Sbjct: 417 TGSLPNETTFLSVLAACSHAGLVDEGQKYFA---SMKKDYGLEPGMEHYGTMVDLLGRAG 473
Query: 384 EIADA 388
++ +A
Sbjct: 474 KLDEA 478
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 198/608 (32%), Positives = 323/608 (53%), Gaps = 64/608 (10%)
Query: 38 QFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNV- 96
+ C + + + QA +H II + L +I Y+K+G++ AR FD+MP+ N
Sbjct: 13 KLCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSF 72
Query: 97 ------------------------------VSWTAMISGYAQNGYDENALLVFSAMLRSG 126
VSW ++ISGY G A+ +++M++ G
Sbjct: 73 SWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDG 132
Query: 127 V-RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK------- 178
V N+ T+S+ L + + GR I G I K F +FV S+L+D+YAK
Sbjct: 133 VLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVA 192
Query: 179 ------------------------CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND 214
G ++D+ LF ++ +D +SW MI GL G
Sbjct: 193 SQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEA 252
Query: 215 DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLI 274
++ LFR M ++GM D +T GS+L A G L + +IH LII+ G + + +L+
Sbjct: 253 EAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALV 312
Query: 275 DVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD 334
D+Y K S+R A +++ M +++S TA++ G+ + + S+EA +F DM + DD
Sbjct: 313 DMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQ-NGFSEEAVRVFCDMQRNGIEPDD 371
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE 394
L +++ CAN+ASL G Q H A V NALI +Y K G I D+N+ FDE
Sbjct: 372 FTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDE 431
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG 454
M ++ +SWT+L++GYA+ G +E I+L+++M +G+ P+ VTF+++L ACS GL G
Sbjct: 432 MSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERG 491
Query: 455 WELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACS 514
+ F M+ + I+P ++H++C++DLF R G+LE A N I +M P + W+ +L +C
Sbjct: 492 QQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCR 551
Query: 515 IYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGY 574
+YGN +G+ AA +L +++P+ Y++LS+IY A G W N + R+ M E+ RK PG+
Sbjct: 552 LYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGF 611
Query: 575 SFLQSSKK 582
S+++ K
Sbjct: 612 SWIKYKSK 619
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 142/281 (50%), Gaps = 2/281 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D T+ S+L C +A ++ IH II +GY N+ + + ++ Y K V A
Sbjct: 268 MDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAV 327
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F RM +NVVSWTAM+ GY QNG+ E A+ VF M R+G+ + FT S + +CA + L
Sbjct: 328 FKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASL 387
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G + + V +AL+ LY KCG IED+ LF+ + +D VSW A++ G
Sbjct: 388 EEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGY 447
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESS 266
A G +++ LF M+ QG+KPD T ++L A S G+ ++ G+
Sbjct: 448 AQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPF 507
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALIS 306
+ +ID++ + G + A M D I L+S
Sbjct: 508 SDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLS 548
>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Glycine max]
Length = 916
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 199/563 (35%), Positives = 320/563 (56%), Gaps = 7/563 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY S+L C + +H+ II + SNL ++ +I YAK G + A K F
Sbjct: 317 DEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHF 376
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ M R+ +SW A+I GY Q + A +F M+ G+ ++ + +S L AC ++ L+
Sbjct: 377 EHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLE 436
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ K NLF S+L+D+Y+KCG I+DA + + + VVS NA+I G A
Sbjct: 437 AGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYA 496
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
++ +S L M G+KP T S++ G +++ QIH I+K GL ++
Sbjct: 497 LKN-TKESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSE 555
Query: 269 LTG-SLIDVYAKYGSIRSAYQLYR--SMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
G SL+ +Y + A L+ S LK+ I+ TALISG +++ S A +L+++M
Sbjct: 556 FLGTSLLGMYMDSQRLADANILFSEFSSLKS-IVMWTALISGHIQNEC-SDVALNLYREM 613
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ D +L CA ++SL+ GR+IH+ F D +AL+DMYAK G++
Sbjct: 614 RDNNISPDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDV 673
Query: 386 ADANRAFDEMG-DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ + F+E+ K+VISW S+I G+AK+GY A++++ +M + P+DVTFL +L A
Sbjct: 674 KSSVQVFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTA 733
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
CSH G EG ++F M+N Y I PR +H++C+VDL R G L+ A I ++ ++P A
Sbjct: 734 CSHAGWVYEGRQIFDVMVNYYGIEPRVDHYACMVDLLGRWGFLKEAEEFIDKLEVEPNAM 793
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
+W+ +LGAC I+G+ G+ AA+ L ++EP+ S YV+LSN+Y A+G WD AR R+ M
Sbjct: 794 IWANLLGACRIHGDEKRGQRAAKKLIELEPQSSSPYVLLSNMYAASGNWDEARSLRRTMI 853
Query: 565 ERSLRKNPGYSFLQSSKKNILLL 587
++ ++K PG S++ ++ L +
Sbjct: 854 KKDIQKIPGCSWIVVGQETNLFV 876
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 164/513 (31%), Positives = 288/513 (56%), Gaps = 9/513 (1%)
Query: 3 IVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
++ + KT ++AL F +S ST S+L A L+HAH I G
Sbjct: 188 MISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQG 247
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+ES++++++ +I Y K AR+ FD + ++N++ W AM+ Y+QNG+ N + +F
Sbjct: 248 FESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFL 307
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M+ G+ ++FTY+S L CA +L+ GR + +I K RF NLFV +AL+D+YAK G
Sbjct: 308 DMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAG 367
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+++A FE + +D +SWNA+I G + +F LFR M+ G+ PD +L SIL
Sbjct: 368 ALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILS 427
Query: 241 ASVGGIELMKI-SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
A G I++++ Q H L +KLGLE++ SLID+Y+K G I+ A++ Y SM + ++
Sbjct: 428 A-CGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVV 486
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
S ALI+G+A + +KE+ +L +M + + ++ ++++C A + LG QIH
Sbjct: 487 SVNALIAGYALKN--TKESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCA 544
Query: 360 AFKYQSSYDAA-VGNALIDMYAKSGEIADANRAFDEMGD-KNVISWTSLIAGYAKHGYGH 417
K + +G +L+ MY S +ADAN F E K+++ WT+LI+G+ ++
Sbjct: 545 IVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECSD 604
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
A+ LY++M+ + P+ TF+++L AC+ +G E+ + + + L S +
Sbjct: 605 VALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDLDELTS-SAL 663
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
VD++A+ G ++S+ + ++ K W++++
Sbjct: 664 VDMYAKCGDVKSSVQVFEELATKKDVISWNSMI 696
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 162/539 (30%), Positives = 277/539 (51%), Gaps = 51/539 (9%)
Query: 75 YAKVGDVLSARKAFDRMPE--RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQF 132
Y +G + A + F +MP RNVV+W MISG+A+ + E AL F M + GV++++
Sbjct: 159 YISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRS 218
Query: 133 TYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI 192
T +S L A A + L G ++ K F +++V S+L+++Y KC +DA +F+ I
Sbjct: 219 TLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAI 278
Query: 193 ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS 252
+K+++ WNAM+G + GF + LF M+ G+ PD FT SIL ++ E +++
Sbjct: 279 SQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSIL-STCACFEYLEVG 337
Query: 253 -QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD 311
Q+H IIK S+ + +LID+YAK G+++ A + + M D IS A+I G+ ++
Sbjct: 338 RQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQE 397
Query: 312 DNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAV 371
+ + AF LF+ MIL + D+V L +L+ C N+ L G+Q H + K +
Sbjct: 398 EVEAG-AFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFA 456
Query: 372 GNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGM 431
G++LIDMY+K G+I DA++ + M +++V+S +LIAGYA E+I L +M+ G+
Sbjct: 457 GSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKN-TKESINLLHEMQILGL 515
Query: 432 VPNDVTFLSLLFACSHT----------------GLTCEGWELFTDMINKYRILPRAEHFS 475
P+++TF SL+ C + GL C L T ++ Y R +
Sbjct: 516 KPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADAN 575
Query: 476 CVVDLFAR-----------RGQLES-----AYNMIRQM---NIKPTASLWSAILGAC--- 513
+ F+ G +++ A N+ R+M NI P + + +L AC
Sbjct: 576 ILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALL 635
Query: 514 -SIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKN 571
S++ + L FD++ S L ++Y G + + + ++ EE + +K+
Sbjct: 636 SSLHDGREIHSLIFHTGFDLDELTS---SALVDMYAKCG---DVKSSVQVFEELATKKD 688
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 139/512 (27%), Positives = 234/512 (45%), Gaps = 42/512 (8%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ L C + +H+ +I +G ES +I YAK + AR F
Sbjct: 46 DQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHLYAKCNSLTCARTIF 105
Query: 89 DR--MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
P + VSWTA+ISGY Q G AL +F M S V +Q + L A
Sbjct: 106 ASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAV-PDQVALVTVLNA------ 158
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER--IERKDVVSWNAMI 204
Y G ++DA LF++ I ++VV+WN MI
Sbjct: 159 -----------------------------YISLGKLDDACQLFQQMPIPIRNVVAWNVMI 189
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G A +++ F M + G+K TL S+L A L +H IK G E
Sbjct: 190 SGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFE 249
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
SS + SLI++Y K A Q++ ++ + ++I A++ ++++ S +LF D
Sbjct: 250 SSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSN-VMELFLD 308
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
MI + D+ +L+ CA L +GRQ+H+ K + + + V NALIDMYAK+G
Sbjct: 309 MISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGA 368
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ +A + F+ M ++ ISW ++I GY + A L+++M +G+VP++V+ S+L A
Sbjct: 369 LKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSA 428
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
C + + E + F + K + S ++D++++ G ++ A+ M + S
Sbjct: 429 CGNIKVL-EAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVS 487
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEK 536
+ + I G S+ L + ++P +
Sbjct: 488 VNALIAGYALKNTKESINLLHEMQILGLKPSE 519
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 185/419 (44%), Gaps = 44/419 (10%)
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG 155
V W + G ++ E L +++ + SG +QFT++ L ACA+++ L GR +
Sbjct: 13 VRQWNWRVQG-TKHYSSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHS 71
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER--IERKDVVSWNAMIGGLAMQGFN 213
+ K F + AL+ LYAKC + A +F VSW A+I G G
Sbjct: 72 CVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLP 131
Query: 214 DDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSL 273
++ +F MR PD L ++L A
Sbjct: 132 HEALHIFDK-MRNSAVPDQVALVTVLNA-------------------------------- 158
Query: 274 IDVYAKYGSIRSAYQLYRSMLKT--DIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
Y G + A QL++ M ++++ +ISG A+ H +EA F M +
Sbjct: 159 ---YISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAK-TAHYEEALAFFHQMSKHGVK 214
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
L +L+ A++A+LN G +HA A K V ++LI+MY K DA +
Sbjct: 215 SSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQV 274
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLT 451
FD + KN+I W +++ Y+++G+ +EL+ M G+ P++ T+ S+L C+
Sbjct: 275 FDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYL 334
Query: 452 CEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
G +L + +I K R + ++D++A+ G L+ A M + S W+AI+
Sbjct: 335 EVGRQLHSAIIKK-RFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHIS-WNAII 391
>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53360, mitochondrial; Flags: Precursor
gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 189/585 (32%), Positives = 316/585 (54%), Gaps = 5/585 (0%)
Query: 2 NIVRANFKTGQLKQALKFSLSC--PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
+++ + GQ +A++ L D + D + S+++ C +HA +I
Sbjct: 138 SVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKL 197
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
S+L +I Y + + A + F +P ++++SW+++I+G++Q G++ AL
Sbjct: 198 ESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHL 257
Query: 120 SAMLRSGV-RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
ML GV N++ + S+L+AC+ + G I G K N +L D+YA+
Sbjct: 258 KEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYAR 317
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
CG++ A +F++IER D SWN +I GLA G+ D++ +F M G PD +L S+
Sbjct: 318 CGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSL 377
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT-D 297
L A + L + QIH IIK G + + SL+ +Y + + L+ D
Sbjct: 378 LCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNAD 437
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
+S +++ + + E LFK M++ + D + + +L C ++SL LG Q+H
Sbjct: 438 SVSWNTILTACLQHE-QPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVH 496
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
++ K + + + N LIDMYAK G + A R FD M +++V+SW++LI GYA+ G+G
Sbjct: 497 CYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGE 556
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
EA+ L+K+MK G+ PN VTF+ +L ACSH GL EG +L+ M ++ I P EH SCV
Sbjct: 557 EALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCV 616
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKS 537
VDL AR G+L A I +M ++P +W +L AC GN L + AA N+ ++P S
Sbjct: 617 VDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNS 676
Query: 538 VNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+V+L +++ ++G W+NA R M++ ++K PG S+++ K
Sbjct: 677 TAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDK 721
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 144/526 (27%), Positives = 260/526 (49%), Gaps = 19/526 (3%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
TY+SL+ C ++ Q IH HI+ + + + L+ ++ Y K G + AR+ FD M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
PERN+VS+T++I+GY+QNG A+ ++ ML+ + +QF + S ++ACA + G+
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ + K +L ++AL+ +Y + + DA +F I KD++SW+++I G + G
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 212 FNDDSFWLFRSMMRQGM-KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
F ++ + M+ G+ P+ + GS L+A + SQIH L IK L + N +
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSEL-AGNAIA 307
Query: 271 G-SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
G SL D+YA+ G + SA +++ + + D S +I+G A ++ ++ EA +F M
Sbjct: 308 GCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLA-NNGYADEAVSVFSQMRSSG 366
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
D + L +L +L+ G QIH++ K+ D V N+L+ MY ++
Sbjct: 367 FIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCF 426
Query: 390 RAFDEM-GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
F++ + + +SW +++ +H E + L+K M P+ +T +LL C
Sbjct: 427 NLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEI 486
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
G ++ + K + P + ++D++A+ G L A + M+ + S +
Sbjct: 487 SSLKLGSQVHCYSL-KTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTL 545
Query: 509 ILGACSIYGNTSLGELAARNLFDM-----EPEKSVNYVVLSNIYTA 549
I+G Y + GE A +M EP N+V + TA
Sbjct: 546 IVG----YAQSGFGEEALILFKEMKSAGIEP----NHVTFVGVLTA 583
>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 853
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 191/552 (34%), Positives = 306/552 (55%), Gaps = 4/552 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ +L C K +H ++ +G + + ++ Y+K G A K F M
Sbjct: 237 TFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMM 296
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
+ V+W MISGY Q+G E +L+ F M+ SGV + T+SS L + ++ L+ R
Sbjct: 297 SRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCR 356
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I I + ++F+ SAL+D Y KC + A +F + DVV + AMI G G
Sbjct: 357 QIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNG 416
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLGLESSNKLT 270
N D+ +FR +++ + P+ TL SIL +GG+ +K+ ++H IIK G ++ +
Sbjct: 417 LNIDALEMFRWLVKVKISPNEITLVSILPV-IGGLLALKLGRELHGFIIKKGFDNRCNIG 475
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
++ID+YAK G + AY+++ + K DI+S ++I+ A+ DN S A D+F+ M + +
Sbjct: 476 CAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITRCAQSDNPSA-AIDIFRQMGVSGI 534
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
D V + L+ CAN+ S + G+ IH F K+ + D + LIDMYAK G + A
Sbjct: 535 CFDCVSISAALSACANLPSESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMN 594
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM-KHEGMVPNDVTFLSLLFACSHTG 449
FD M +KN++SW S+IA Y HG +++ L+ +M + G P+ +TFL ++ C H G
Sbjct: 595 VFDTMKEKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVG 654
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
EG F M Y I P+ EH++CVVDLF R G+L AY ++ M P A +W +
Sbjct: 655 DVDEGVRFFRSMTQDYGIQPQQEHYACVVDLFGRAGRLSEAYETVKSMPFPPDAGVWGTL 714
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
LGA ++ N L ++A+ L D++P S YV++SN + G W++ K R LM+ER ++
Sbjct: 715 LGASRLHKNVELAKVASSRLMDLDPWNSGYYVLISNAHANTGEWESVTKVRSLMKEREVQ 774
Query: 570 KNPGYSFLQSSK 581
K PGYS+++ +K
Sbjct: 775 KIPGYSWIEINK 786
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 145/519 (27%), Positives = 259/519 (49%), Gaps = 8/519 (1%)
Query: 2 NIVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
+I+ + + G L QAL F + C D ST+ L++ C+ K + + + +
Sbjct: 104 SIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIEFLSDTVSSL 163
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G + N +++ +I Y + G + A K FDR+ +++ V W M++GYA+ G ++ + F
Sbjct: 164 GMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGF 223
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
S M + N T+ L CA + G + G + +K++LL +Y+KC
Sbjct: 224 SLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKC 283
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G +DA LF + R D V+WN MI G G ++S F M+ G+ PD T S+L
Sbjct: 284 GRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLL 343
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
+ L QIH I++ + LT +LID Y K + A +++ D++
Sbjct: 344 PSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVV 403
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
TA+ISG+ + + +A ++F+ ++ K+ +++ L +L + + +L LGR++H F
Sbjct: 404 VFTAMISGYLH-NGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGRELHGF 462
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
K +G A+IDMYAK G + A F + ++++SW S+I A+ A
Sbjct: 463 IIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITRCAQSDNPSAA 522
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD 479
I+++++M G+ + V+ + L AC++ G + MI K+ + S ++D
Sbjct: 523 IDIFRQMGVSGICFDCVSISAALSACANLPSESFGKAIHGFMI-KHSLALDVYSESTLID 581
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
++A+ G L++A N+ M K S W++I+ A YGN
Sbjct: 582 MYAKCGNLKAAMNVFDTMKEKNIVS-WNSIIAA---YGN 616
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/493 (25%), Positives = 237/493 (48%), Gaps = 5/493 (1%)
Query: 30 PSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFD 89
P LLQ C + RQ +HA +I N + + +++ YA G + K F
Sbjct: 31 PRRLSLLLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFY 90
Query: 90 RMPER--NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
R+ R ++ W ++IS + + G AL + ML GV + T+ ++AC ++
Sbjct: 91 RLDSRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNF 150
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+G + ++ N FV S+L+ Y + G I+ A LF+R+ +KD V WN M+ G
Sbjct: 151 KGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGY 210
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A G +D F M + P+ T +L + + Q+H L++ GL+
Sbjct: 211 AKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEG 270
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ SL+ +Y+K G A +L+R M + D ++ +ISG+ + +E+ F +MI
Sbjct: 271 SIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQ-SGLMEESLIFFYEMIS 329
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ D + +L + +L RQIH + ++ S D + +ALID Y K ++
Sbjct: 330 SGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSM 389
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A + F + +V+ +T++I+GY +G +A+E+++ + + PN++T +S+L
Sbjct: 390 AQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGG 449
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
G EL +I K R V+D++A+ G++ AY + +++ + S W+
Sbjct: 450 LLALKLGRELHGFIIKK-GFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVS-WN 507
Query: 508 AILGACSIYGNTS 520
+++ C+ N S
Sbjct: 508 SMITRCAQSDNPS 520
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 191/550 (34%), Positives = 290/550 (52%), Gaps = 1/550 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D +T SL+ C +HA+ G+ SN + ++ YAK D+ +A F
Sbjct: 371 DSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYF 430
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
NVV W M+ Y N+ +F M + NQ+TY S L+ C R+ L+
Sbjct: 431 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 490
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G I I K F N +V S L+D+YAK G ++ AW + R KDVVSW MI G
Sbjct: 491 LGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 550
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
F+D + FR M+ +G++ D L + + A G L + QIH G S
Sbjct: 551 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 610
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+L+ +Y+K G+I AY + D I+ AL+SGF + N+ +EA +F M +
Sbjct: 611 FQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNN-EEALRVFARMNRE 669
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ ++ + + A++ G+Q+HA K + V NA+I MYAK G I+DA
Sbjct: 670 GIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDA 729
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ F E+ KN +SW ++I Y+KHG+G EA++ + +M H + PN VT + +L ACSH
Sbjct: 730 KKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHI 789
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
GL +G E F M +Y + P+ EH+ CVVD+ R G L A + I +M I+P A +W
Sbjct: 790 GLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRT 849
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L AC ++ N +GE AA +L ++EPE S YV+LSN+Y WD TR+ M+E+ +
Sbjct: 850 LLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKGV 909
Query: 569 RKNPGYSFLQ 578
+K PG S+++
Sbjct: 910 KKEPGQSWIE 919
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 156/527 (29%), Positives = 271/527 (51%), Gaps = 19/527 (3%)
Query: 30 PSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFD 89
P + S+L C ++ +H ++ G+ S+ ++ ++ Y +G ++SA F
Sbjct: 271 PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFS 330
Query: 90 RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG 149
M +R+ V++ +I+G +Q GY E A+ +F M G+ + T +S + AC+ L
Sbjct: 331 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFS 390
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
G+ + K F N ++ ALL+LYAKC IE A F E ++VV WN M L
Sbjct: 391 GQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVM---LVA 447
Query: 210 QGFNDD---SFWLFRSMMRQGMKPDCFTLGSILRASV--GGIELMKISQIHDLIIKLGLE 264
G DD SF +FR M + + P+ +T SIL+ + G +EL + QIH IIK +
Sbjct: 448 YGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE--QIHSQIIKTSFQ 505
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ + LID+YAK G + +A+ + D++S T +I+G+ + N +A F+
Sbjct: 506 LNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQ-YNFDDKALTTFRQ 564
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M+ + + D+V L ++ CA + +L G+QIHA A S D NAL+ +Y+K G
Sbjct: 565 MLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGN 624
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
I +A AF++ + I+W +L++G+ + G EA+ ++ +M EG+ N+ TF S + A
Sbjct: 625 IEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKA 684
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
S T +G ++ +I K E + ++ ++A+ G + A ++++K S
Sbjct: 685 ASETANMKQGKQVHA-VITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVS 743
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSV--NYVVLSNIYTA 549
W+A++ A S +G S A + FD +V N+V L + +A
Sbjct: 744 -WNAMINAYSKHGFGS----EALDSFDQMIHSNVRPNHVTLVGVLSA 785
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 141/520 (27%), Positives = 257/520 (49%), Gaps = 15/520 (2%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IHA II G + + +I Y++ G V AR+ FD + ++ SW AMISG ++N
Sbjct: 192 IHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNEC 251
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ A+ +F M G+ + +SS L AC ++ L+ G + G + K F + +V +A
Sbjct: 252 EVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA 311
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+ LY G + A +F + ++D V++N +I GL+ G+ + + LF+ M G++PD
Sbjct: 312 LVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPD 371
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
TL S++ A L Q+H KLG S++K+ G+L+++YAK I +A +
Sbjct: 372 SNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFL 431
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
+++ ++ + D+ + +F +F+ M ++++ + +L C + L
Sbjct: 432 ETEVENVVLWNVMLVAYGLLDD-LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 490
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
LG QIH+ K +A V + LIDMYAK G++ A K+V+SWT++IAGY
Sbjct: 491 LGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 550
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM-INKYRI-LP 469
++ + +A+ +++M G+ ++V + + AC+ EG ++ ++ + LP
Sbjct: 551 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 610
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
+ +V L+++ G +E AY Q + W+A++ GN E A R
Sbjct: 611 FQ---NALVTLYSKCGNIEEAYLAFEQTEAGDNIA-WNALVSGFQQSGNN---EEALRVF 663
Query: 530 FDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
M E + SN +T A A +T + + + +
Sbjct: 664 ARMNREG-----IDSNNFTFGSAVKAASETANMKQGKQVH 698
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 137/490 (27%), Positives = 248/490 (50%), Gaps = 19/490 (3%)
Query: 36 LLQFCIDKKAE-RQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
LL+ C+ + +H+ I+ G+++N LS K++ FY GD+ A K FD MPER
Sbjct: 73 LLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPER 132
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM-- 152
+ +W MI A +F M+ V N+ T+S L AC +GG +
Sbjct: 133 TIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEAC------RGGSVAF 186
Query: 153 -----IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
I I ++ V + L+DLY++ G+++ A +F+ + KD SW AMI GL
Sbjct: 187 DVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGL 246
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI-SQIHDLIIKLGLESS 266
+ ++ LF M G+ P + S+L A IE ++I Q+H L++KLG S
Sbjct: 247 SKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSA-CKKIESLEIGEQLHGLVLKLGFSSD 305
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ +L+ +Y GS+ SA ++ +M + D ++ LI+G ++ + ++A +LFK M
Sbjct: 306 TYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQ-CGYGEKAMELFKRMQ 364
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
L + D L ++ C++ +L G+Q+HA+ K + + + AL+++YAK +I
Sbjct: 365 LDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIE 424
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A F E +NV+ W ++ Y + ++++M+ E +VPN T+ S+L C
Sbjct: 425 TALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCI 484
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
G G ++ + +I K A S ++D++A+ G+L++A++++ + K S W
Sbjct: 485 RLGDLELGEQIHSQII-KTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS-W 542
Query: 507 SAILGACSIY 516
+ ++ + Y
Sbjct: 543 TTMIAGYTQY 552
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 193/553 (34%), Positives = 308/553 (55%), Gaps = 42/553 (7%)
Query: 71 VIIFYAKVGDVLSARKAFDRMP-----ERNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
+I YA+ G A K F M + NVVSWTA+I+G QNGYD AL VF M+
Sbjct: 297 IISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLE 356
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIED 184
GV+ N T +SA+ AC + L+ GR I G I+ +L V ++L+D YAKC +E
Sbjct: 357 GVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEV 416
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR---- 240
A F I++ D+VSWNAM+ G A++G ++++ L M QG++PD T ++
Sbjct: 417 ARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQ 476
Query: 241 ------------------------------ASVGGIELMKIS-QIHDLIIKLGLESSNKL 269
A+ G + +K+ +IH +++ +E S +
Sbjct: 477 YGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGV 536
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+LI +Y+ S+ A ++ + D++ ++IS A+ S A DL ++M L
Sbjct: 537 GSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQS-GRSVNALDLLREMNLSN 595
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ ++ V + L C+ +A+L G++IH F + + N+LIDMY + G I +
Sbjct: 596 VEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSR 655
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
R FD M ++++SW +I+ Y HG+G +A+ L+++ + G+ PN +TF +LL ACSH+G
Sbjct: 656 RIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSG 715
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
L EGW+ F M +Y + P E ++C+VDL +R GQ I +M +P A++W ++
Sbjct: 716 LIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSL 775
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
LGAC I+ N L E AAR LF++EP+ S NYV+++NIY+AAG W++A K R LM+ER +
Sbjct: 776 LGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVT 835
Query: 570 KNPGYSFLQSSKK 582
K PG S+++ +K
Sbjct: 836 KPPGCSWIEVKRK 848
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 130/447 (29%), Positives = 215/447 (48%), Gaps = 44/447 (9%)
Query: 21 LSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGD 80
L+ PD ++ Y S+LQ C R +HA ++ NG + L ++++ Y + G
Sbjct: 82 LTNPDECIE--IYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGC 139
Query: 81 VLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRA 140
V AR+ FD+M ERNV SWTA++ Y G E + +F M+ GVR + F + +A
Sbjct: 140 VEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKA 199
Query: 141 CARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSW 200
C+ ++ + G+ + + F N VK ++LD++ KCG ++ A FE IE KDV W
Sbjct: 200 CSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMW 259
Query: 201 NAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIK 260
N M+ G +G + M G+KPD T +I+
Sbjct: 260 NIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG------------------- 300
Query: 261 LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM-----LKTDIISCTALISGFARDDNHS 315
YA+ G A + + M K +++S TALI+G + + +
Sbjct: 301 ----------------YAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAG-SEQNGYD 343
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS-SYDAAVGNA 374
EA +F+ M+L+ + + + + ++ C N++ L GR+IH + K + D VGN+
Sbjct: 344 FEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNS 403
Query: 375 LIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
L+D YAK + A R F + +++SW +++AGYA G EAIEL +MK +G+ P+
Sbjct: 404 LVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPD 463
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDM 461
+T+ L+ + G E F M
Sbjct: 464 IITWNGLVTGFTQYGDGKAALEFFQRM 490
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 196/419 (46%), Gaps = 48/419 (11%)
Query: 108 QNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLF 167
+NG NA ++ S+M + Y+S L+ C ++ L+ G + + F
Sbjct: 66 RNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEF 125
Query: 168 VKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
+ S LL++Y + G +EDA +F+++ ++V SW A++ G +++ LF M+ +G
Sbjct: 126 LGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEG 185
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
++PD F + +A ++D ++ +G E ++ + GS++D++ K G + A
Sbjct: 186 VRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIAR 245
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
+ + + D+ ++SG+ K+A DM L + D V
Sbjct: 246 RFFEEIEFKDVFMWNIMVSGYT-SKGEFKKALKCISDMKLSGVKPDQVTW---------- 294
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-----DKNVIS 402
NA+I YA+SG+ +A++ F EMG NV+S
Sbjct: 295 -------------------------NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVS 329
Query: 403 WTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI 462
WT+LIAG ++GY EA+ +++KM EG+ PN +T S + AC++ L G E+ I
Sbjct: 330 WTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCI 389
Query: 463 NKYRILPRAEHFSCVVDLFARRGQLESA---YNMIRQMNIKPTASLWSAILGACSIYGN 518
+ + +VD +A+ +E A + MI+Q ++ W+A+L ++ G+
Sbjct: 390 KVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVS----WNAMLAGYALRGS 444
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 117/233 (50%), Gaps = 2/233 (0%)
Query: 11 GQLKQALKFSLSCPDTLLDP--STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLS 68
G K AL+F +DP +T L C + + IH +++ N E + +
Sbjct: 478 GDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVG 537
Query: 69 TKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR 128
+ +I Y+ + A F + R+VV W ++IS AQ+G NAL + M S V
Sbjct: 538 SALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVE 597
Query: 129 ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWIL 188
N T SAL AC+++ L+ G+ I I + F+ ++L+D+Y +CG I+ + +
Sbjct: 598 VNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRI 657
Query: 189 FERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
F+ + ++D+VSWN MI M GF D+ LF+ G+KP+ T ++L A
Sbjct: 658 FDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSA 710
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 102/211 (48%), Gaps = 10/211 (4%)
Query: 2 NIVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
+I+ A ++G+ AL ++ + ++ T +S L C A RQ IH II
Sbjct: 570 SIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRC 629
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G ++ + +I Y + G + +R+ FD MP+R++VSW MIS Y +G+ +A+ +F
Sbjct: 630 GLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLF 689
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGG----RMIQGSIQKGRFVENLFVKSALLDL 175
G++ N T+++ L AC+ ++ G +M++ VE + ++DL
Sbjct: 690 QQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQY---ACMVDL 746
Query: 176 YAKCGWIEDAWILFERIE-RKDVVSWNAMIG 205
++ G + E++ + W +++G
Sbjct: 747 LSRAGQFNETLEFIEKMPFEPNAAVWGSLLG 777
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 191/585 (32%), Positives = 305/585 (52%), Gaps = 36/585 (6%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
DP T +L C D + + IH + +G N+ +S ++ Y V A+ F
Sbjct: 241 DPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVF 300
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D MP RNV++W ++ S Y G+ + L VF M +GV+ + SS L AC++++ L+
Sbjct: 301 DLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLK 360
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ I G K VE++FV +AL++LYA C + +A +F+ + ++VV+WN++
Sbjct: 361 SGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYV 420
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
GF +FR M+ G+KPD T+ SIL A +L IH ++ G+
Sbjct: 421 NCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVF 480
Query: 269 LTGSLIDVYAKYGSIRSAY-----------------------------------QLYRSM 293
+ +L+ +YAK +R A Q+ R
Sbjct: 481 VCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDE 540
Query: 294 LKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG 353
+K D I+ + +I G ++ + +EA ++F+ M D+ + +L C+ L +G
Sbjct: 541 VKADEITWSVVIGGCVKN-SRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMG 599
Query: 354 RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKH 413
++IH + F++ +D A NAL+DMYAK G ++ + FD M K+V SW ++I H
Sbjct: 600 KEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMH 659
Query: 414 GYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEH 473
G G EA+ L++KM + P+ TF +L ACSH+ L EG ++F M + + P AEH
Sbjct: 660 GNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEH 719
Query: 474 FSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDME 533
++CVVD+++R G LE AY I++M ++PTA W A L C +Y N L +++A+ LF+++
Sbjct: 720 YTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEID 779
Query: 534 PEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
P S NYV L NI A W A K RKLM+ER + K PG S+
Sbjct: 780 PNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFH 824
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 144/525 (27%), Positives = 259/525 (49%), Gaps = 38/525 (7%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
+P T S+L C D + + IH ++ +G ++ +S+ + FYAK V A+ F
Sbjct: 140 NPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVF 199
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D MP R+VV+W ++ S Y G+ + L VF M+ GV+ + T S L AC+ ++ L+
Sbjct: 200 DLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLK 259
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ I G K VEN+FV +AL++LY C + +A +F+ + ++V++WN++
Sbjct: 260 SGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYV 319
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
GF +FR M G+KPD + SIL A +L IH +K G+
Sbjct: 320 NCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVF 379
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +L+++YA +R A ++ M ++++ +L S + + ++ ++F++M+L
Sbjct: 380 VCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYV-NCGFPQKGLNVFREMVLN 438
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ D V + +L+ C+++ L G+ IH FA ++ D V NAL+ +YAK + +A
Sbjct: 439 GVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREA 498
Query: 389 NRAFDEMGDKNV-----------------------------------ISWTSLIAGYAKH 413
FD + + V I+W+ +I G K+
Sbjct: 499 QVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKN 558
Query: 414 GYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEH 473
EA+E+++KM+ G P++ T S+L ACS + G E+ + ++ A
Sbjct: 559 SRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLART 618
Query: 474 FSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
+ +VD++A+ G L + N+ M IK S W+ ++ A ++GN
Sbjct: 619 -NALVDMYAKCGGLSLSRNVFDMMPIKDVFS-WNTMIFANGMHGN 661
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 135/518 (26%), Positives = 247/518 (47%), Gaps = 34/518 (6%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D +M++ + C + + H G S++ + I Y K V AR+ F
Sbjct: 39 DKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGARRVF 98
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D + R+VV+W ++ + Y G+ + L VF M + V+AN T SS L C+ ++ L+
Sbjct: 99 DDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLK 158
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ I G + + VE++FV SA ++ YAKC + +A +F+ + +DVV+WN++
Sbjct: 159 SGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYV 218
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
GF +FR M+ G+KPD T+ IL A +L IH +K G+ +
Sbjct: 219 NCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVF 278
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
++ +L+++Y +R A ++ M ++I+ +L S + + ++ ++F++M L
Sbjct: 279 VSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYV-NCGFPQKGLNVFREMGLN 337
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ D + + +L C+ + L G+ IH FA K+ D V AL+++YA + +A
Sbjct: 338 GVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREA 397
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS-- 446
FD M +NV++W SL + Y G+ + + ++++M G+ P+ VT LS+L ACS
Sbjct: 398 QTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDL 457
Query: 447 ---HTGLTCEGWELFTDMINK-----------------------YRILPRAE--HFSCVV 478
+G G+ + M+ + ++P E ++ ++
Sbjct: 458 QDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGIL 517
Query: 479 DLFARRGQLESAYNMIRQMN---IKPTASLWSAILGAC 513
+ + E M QMN +K WS ++G C
Sbjct: 518 TAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGC 555
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 204/439 (46%), Gaps = 34/439 (7%)
Query: 109 NGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFV 168
+G A+ ++++ G++ ++ + + +ACA R + + + ++ +
Sbjct: 18 HGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSI 77
Query: 169 KSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGM 228
+A + Y KC +E A +F+ + +DVV+WN++ GF +FR M +
Sbjct: 78 GNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKV 137
Query: 229 KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQ 288
K + T+ SIL +L +IH +++ G+ ++ + ++ YAK +R A
Sbjct: 138 KANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQT 197
Query: 289 LYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
++ M D+++ +L S + + ++ ++F++M+L + D V + +L+ C+++
Sbjct: 198 VFDLMPHRDVVTWNSLSSCYV-NCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQ 256
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA 408
L G+ IH FA K+ + V NAL+++Y + +A FD M +NVI+W SL +
Sbjct: 257 DLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLAS 316
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH-----TGLTCEGW-------- 455
Y G+ + + ++++M G+ P+ + S+L ACS +G T G+
Sbjct: 317 CYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVE 376
Query: 456 ELF--TDMINKYRILPRAEHFSCVVDLFARR-----GQLESAY----------NMIRQM- 497
++F T ++N Y V DL R L S Y N+ R+M
Sbjct: 377 DVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMV 436
Query: 498 --NIKPTASLWSAILGACS 514
+KP +IL ACS
Sbjct: 437 LNGVKPDLVTMLSILHACS 455
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 179/554 (32%), Positives = 308/554 (55%), Gaps = 4/554 (0%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L D Y +++Q CI + ++HA I+ G+ +++ +ST ++ YAK+G + +
Sbjct: 164 LPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYW 223
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
F+ M E N VSW AMISG NG A +F M N +T S +A ++
Sbjct: 224 VFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVD 283
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER--IERKDVVSWNAMI 204
+ G+ +Q + N+ V +AL+D+Y+KCG + DA +F+ I WNAMI
Sbjct: 284 VNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMI 343
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G + G + ++ L+ M + G+ D +T S+ A L +H +++K GL+
Sbjct: 344 SGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLD 403
Query: 265 -SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
+ ++ D Y+K G + +++ M + DI+S T L++ +++ + +EA F
Sbjct: 404 LMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQS-SLGEEALATFC 462
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
M + + +L CA++ L GRQ+H K + + +ALIDMYAK G
Sbjct: 463 LMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCG 522
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
I +A + FD++ + +++SWT++I+GYA+HG +A++L+++M+ G+ N VT L +LF
Sbjct: 523 SITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLF 582
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
ACSH G+ EG F M + Y ++P EH++C++DL R G+L+ A IR+M ++P
Sbjct: 583 ACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNE 642
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
+W +LG C ++GN LGE+AAR + + PE S YV+LSN Y G++++ R +M
Sbjct: 643 MVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVM 702
Query: 564 EERSLRKNPGYSFL 577
+++ ++K PGYS++
Sbjct: 703 KDQGVKKEPGYSWI 716
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 146/495 (29%), Positives = 260/495 (52%), Gaps = 20/495 (4%)
Query: 34 MSLLQFCIDKKAERQAHLIHAHIITNGYESN--LHLSTKVIIFYAKVGDVLSARKAFDRM 91
+ +L+ C +K + R+A +H ++ + +E + L Y+K + +A FD M
Sbjct: 68 IDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEM 127
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P+RNV SWT MI G ++G + F ML SG+ ++F YS+ +++C + L+ G+
Sbjct: 128 PQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGK 187
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
M+ I F ++FV ++LL++YAK G IED++ +F + + VSWNAMI G G
Sbjct: 188 MVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNG 247
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
+ ++F LF M P+ +TL S+ +A +++ ++ + +LG+E + +
Sbjct: 248 LHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGT 307
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISC------TALISGFARDDNHSKEAFDLFKDM 325
+LID+Y+K GS+ A RS+ T+ I+C A+ISG+++ S+EA +L+ M
Sbjct: 308 ALIDMYSKCGSLHDA----RSVFDTNFINCGVNTPWNAMISGYSQ-SGCSQEALELYVQM 362
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYD---AAVGNALIDMYAKS 382
+ D C + N A SL GR +H K D +V NA+ D Y+K
Sbjct: 363 CQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLK--CGLDLMVVSVNNAIADAYSKC 420
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
G + D + FD M +++++SWT+L+ Y++ G EA+ + M+ EG PN TF S+L
Sbjct: 421 GFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVL 480
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
+C+ G ++ ++ K + S ++D++A+ G + A + +++ P
Sbjct: 481 ISCASLCFLEYGRQVH-GLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKIS-NPD 538
Query: 503 ASLWSAILGACSIYG 517
W+AI+ + +G
Sbjct: 539 IVSWTAIISGYAQHG 553
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 186/550 (33%), Positives = 292/550 (53%), Gaps = 1/550 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T SLL C ++ +H++++ G + ++ Y K GD+ +A F
Sbjct: 244 DCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIF 303
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ NVV W M+ Y Q + +F M +G+ NQFTY LR C ++
Sbjct: 304 NLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIE 363
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G I K F +++V L+D+Y+K G ++ A + E +E++DVVSW +MI G
Sbjct: 364 LGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYV 423
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
F +++ F+ M G+ PD L S A G + + QIH + G +
Sbjct: 424 QHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADIS 483
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +L+++YA+ G A+ L+R + D I+ LISGF + + K+A +F M
Sbjct: 484 IWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLY-KQALMVFMKMGQA 542
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ ++ AN+A + G+Q+H A K + + V NALI +Y K G I DA
Sbjct: 543 GAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDA 602
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
F EM +N +SW ++I ++HG G EA++L+ +MK EG+ PNDVTF+ +L ACSH
Sbjct: 603 KMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHV 662
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
GL EG F M N Y + P +H++CVVD+ R GQL+ A + +M I A +W
Sbjct: 663 GLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRT 722
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L AC ++ N +GELAA++L ++EP S +YV+LSN Y G W N + RK+M++R +
Sbjct: 723 LLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGI 782
Query: 569 RKNPGYSFLQ 578
RK PG S+++
Sbjct: 783 RKEPGRSWIE 792
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 161/527 (30%), Positives = 267/527 (50%), Gaps = 13/527 (2%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
++G K+A + T + P+ Y+ S+L C K Q +IHA + + S
Sbjct: 121 QSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETF 180
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ +I Y G A + F M + V++ +ISG+AQ G+ E AL +F M SG
Sbjct: 181 VGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSG 240
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
+R + T +S L ACA + LQ G+ + + K + + +LLDLY KCG IE A
Sbjct: 241 LRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAH 300
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVG 244
+F +R +VV WN M+ SF +F M G+ P+ FT ILR G
Sbjct: 301 DIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTG 360
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
IEL + QIH L IK G ES ++G LID+Y+KYG + A ++ + K D++S T++
Sbjct: 361 QIELGE--QIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSM 418
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
I+G+ + D +EA FK+M + D++ L + CA + ++ G QIHA +
Sbjct: 419 IAGYVQHD-FCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSG 477
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
+ D ++ N L+++YA+ G +A F E+ K+ I+W LI+G+ + +A+ ++
Sbjct: 478 YAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFM 537
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
KM G N TF+S + A ++ +G ++ + K E + ++ L+ +
Sbjct: 538 KMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAV-KTGHTSETEVANALISLYGKC 596
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
G +E A + +M+++ S W+ I+ +CS +G L A +LFD
Sbjct: 597 GSIEDAKMIFSEMSLRNEVS-WNTIITSCSQHGRG----LEALDLFD 638
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 135/460 (29%), Positives = 239/460 (51%), Gaps = 5/460 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IHA + G ++ + +I YAK G V AR+ F + R+ VSW AM+SGYAQ+G
Sbjct: 65 IHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGL 124
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ A ++S M + V + SS L AC + + GRMI + K F FV +A
Sbjct: 125 GKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNA 184
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+ LY G + A +F + D V++N +I G A G + + +F M G++PD
Sbjct: 185 LIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPD 244
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
C T+ S+L A +L K Q+H ++K G+ GSL+D+Y K G I +A+ ++
Sbjct: 245 CVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFN 304
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
+T+++ ++ + + + +K +F++F M + + +L C +
Sbjct: 305 LGDRTNVVLWNLMLVAYGQISDLAK-SFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIE 363
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
LG QIH+ + K D V LIDMY+K G + A + + + ++V+SWTS+IAGY
Sbjct: 364 LGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYV 423
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM-INKYRILPR 470
+H + EA+ +K+M+ G+ P+++ S AC+ +G ++ + ++ Y
Sbjct: 424 QHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYA--AD 481
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
++ +V+L+AR G+ E A+++ R++ K + W+ ++
Sbjct: 482 ISIWNTLVNLYARCGRSEEAFSLFREIEHKDEIT-WNGLI 520
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 169/358 (47%), Gaps = 47/358 (13%)
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR 310
+ +IH + GL + + LID+YAK G + A Q+++ + D +S A++SG+A+
Sbjct: 62 VLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQ 121
Query: 311 DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA 370
KEAF L+ M + +L +L+ C GR IHA +K +
Sbjct: 122 -SGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETF 180
Query: 371 VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG 430
VGNALI +Y G A R F +M + +++ +LI+G+A+ G+G A++++ +M+ G
Sbjct: 181 VGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSG 240
Query: 431 MVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA 490
+ P+ VT SLL AC+ G +G +L + ++ S ++DL+ + G +E+A
Sbjct: 241 LRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGS-LLDLYVKCGDIETA 299
Query: 491 YNM----------------------------------IRQMNIKPTASLWSAILGACSIY 516
+++ ++ I P + IL C+
Sbjct: 300 HDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCT 359
Query: 517 GNTSLGE----LAARNLFDMEPEKSVNYV--VLSNIYTAAGAWDNARKTRKLMEERSL 568
G LGE L+ +N F+ S YV VL ++Y+ G D ARK +++E+R +
Sbjct: 360 GQIELGEQIHSLSIKNGFE-----SDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDV 412
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 182/503 (36%), Positives = 298/503 (59%), Gaps = 5/503 (0%)
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
A K FD+MPERN+V+WT MI+ +AQ G +A+ +F M SG ++FTYSS L AC
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC---GWIEDAWILFERIERKDVVSW 200
+ L G+ + + + ++ V +L+D+YAKC G ++D+ +FE++ +V+SW
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128
Query: 201 NAMIGGLAMQGFND-DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLII 259
A+I A G D ++ LF M+ ++P+ F+ S+L+A + Q++ +
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
KLG+ S N + SLI +YA+ G + A + + + + +++S A++ G+A++ S+EAF
Sbjct: 189 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLK-SEEAF 247
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMY 379
LF ++ +GI +L+ A++ ++ G QIH K + + NALI MY
Sbjct: 248 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMY 307
Query: 380 AKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFL 439
++ G I A + F+EM D+NVISWTS+I G+AKHG+ A+E++ KM G PN++T++
Sbjct: 308 SRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYV 367
Query: 440 SLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
++L ACSH G+ EG + F M ++ I+PR EH++C+VDL R G L A I M +
Sbjct: 368 AVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPL 427
Query: 500 KPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKT 559
A +W +LGAC ++GNT LG AA + + EP+ Y++LSN++ +AG W + K
Sbjct: 428 MADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKI 487
Query: 560 RKLMEERSLRKNPGYSFLQSSKK 582
RK M+ER+L K G S+++ +
Sbjct: 488 RKSMKERNLIKEAGCSWIEVENR 510
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 217/425 (51%), Gaps = 12/425 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKV---GDVLSAR 85
D TY S+L C + +H+ +I G ++ + ++ YAK G V +R
Sbjct: 55 DRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSR 114
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGY-DENALLVFSAMLRSGVRANQFTYSSALRACARM 144
K F++MPE NV+SWTA+I+ YAQ+G D+ A+ +F M+ +R N F++SS L+AC +
Sbjct: 115 KVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNL 174
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
G + K V ++L+ +YA+ G +EDA F+ + K++VS+NA++
Sbjct: 175 SDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIV 234
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G A ++++F LF + G+ FT S+L + + K QIH ++K G +
Sbjct: 235 DGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYK 294
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
S+ + +LI +Y++ G+I +A+Q++ M ++IS T++I+GFA+ + A ++F
Sbjct: 295 SNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAK-HGFATRALEMFHK 353
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNA-LIDMYAKSG 383
M+ +++ +L+ C++V ++ G++ +K A ++D+ +SG
Sbjct: 354 MLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSG 413
Query: 384 EIADANRAFDEMG-DKNVISWTSLIAGYAKHG---YGHEAIELYKKMKHEGMVPNDVTFL 439
+ +A + M + + W +L+ HG G A E+ ++ E P L
Sbjct: 414 LLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMI--LEQEPDDPAAYILL 471
Query: 440 SLLFA 444
S L A
Sbjct: 472 SNLHA 476
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 206/451 (45%), Gaps = 54/451 (11%)
Query: 3 IVRANFKTGQL-KQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITN 59
I+ A ++G+ K+A++ + P+ ++ S+L+ C + ++++ +
Sbjct: 131 IITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKL 190
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G S + +I YA+ G + ARKAFD + E+N+VS+ A++ GYA+N E A L+F
Sbjct: 191 GIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF 250
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
+ + +G+ + FT++S L A + + G I G + KG + N + +AL+ +Y++C
Sbjct: 251 NEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRC 310
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G IE A+ +F +E ++V+SW +MI G A GF + +F M+ G KP+ T ++L
Sbjct: 311 GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVL 370
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
A H +I G + N + Y ++G I + Y M+ D++
Sbjct: 371 SACS-----------HVGMISEGQKHFNSM-------YKEHG-IVPRMEHYACMV--DLL 409
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
+ L+ EA + M L D ++ +L C + LGR
Sbjct: 410 GRSGLLV----------EAMEFINSMPLMA---DALVWRTLLGACRVHGNTELGRHAAEM 456
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVI-----SWTSL-------I 407
+ Q D A L +++A +G+ D + M ++N+I SW +
Sbjct: 457 ILE-QEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFH 515
Query: 408 AGYAKHGYG----HEAIELYKKMKHEGMVPN 434
G H E +L K+K G +P+
Sbjct: 516 VGETSHPQAWQIYQELDQLASKIKEMGYIPD 546
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A A + FD+M ++N+++WT +I +A+ G +AI+L+ M+ G VP+ T+ S+L AC
Sbjct: 7 APAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 66
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFAR---RGQLESAYNMIRQMNIKPT 502
+ GL G +L + +I L S +VD++A+ G ++ + + QM
Sbjct: 67 TELGLLALGKQLHSRVIRLGLALDVCVGCS-LVDMYAKCAADGSVDDSRKVFEQMPEHNV 125
Query: 503 ASLWSAILGA 512
S W+AI+ A
Sbjct: 126 MS-WTAIITA 134
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 196/563 (34%), Positives = 312/563 (55%), Gaps = 10/563 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T +L+ C++ A +H + I G E ++ +S ++ Y+K G + AR FD M
Sbjct: 185 TLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWM 244
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC--ARMRWLQG 149
ER+VV W M+ GY Q G ++ A +FS RSG+R ++F+ L C A L+
Sbjct: 245 RERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLEL 304
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
G+ + G K ++ V ++L+++Y+K G A +F ++ D++SWN+MI A
Sbjct: 305 GKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQ 364
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGG-----IELMKISQIHDLIIKLGLE 264
++S LF ++ +G+KPD FTL SI A+ + L + QIH IK G +
Sbjct: 365 SSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFD 424
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
S + ++D+Y K G + +A ++ + D ++ T++ISG D+ + +A ++
Sbjct: 425 SDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCV-DNGNEDQALRIYHR 483
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M ++ D+ ++ + V +L GRQ+HA K D VG +L+DMYAK G
Sbjct: 484 MRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGN 543
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
I DA R F +M +N+ W +++ G A+HG EA+ L+K MK G+ P+ V+F+ +L A
Sbjct: 544 IEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSA 603
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
CSH GLT E +E M N Y I P EH+SC+VD R G ++ A +I M K +AS
Sbjct: 604 CSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASAS 663
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
+ A+LGAC I G+ G+ A LF +EP S YV+LSNIY AA WD+ RK+M+
Sbjct: 664 INRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMK 723
Query: 565 ERSLRKNPGYSFLQSSKKNILLL 587
++++K+PG+S++ KN+L L
Sbjct: 724 RKNVKKDPGFSWIDV--KNMLHL 744
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 153/519 (29%), Positives = 275/519 (52%), Gaps = 30/519 (5%)
Query: 53 HAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYA----- 107
HA I+ +G + LS ++ Y+K G + SAR+ FD PER++V+W A++ YA
Sbjct: 100 HARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDS 159
Query: 108 QNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLF 167
+G + L +F + S + T + L+ C L + G K ++F
Sbjct: 160 NDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVF 219
Query: 168 VKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
V AL+++Y+KCG + DA +LF+ + +DVV WN M+ G G ++F LF R G
Sbjct: 220 VSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSG 279
Query: 228 MKPDCFTLGSILR----ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
++PD F++ IL A +EL K Q+H + +K GL+S + SL+++Y+K G
Sbjct: 280 LRPDEFSVQLILNGCLWAGTDDLELGK--QVHGIAVKSGLDSDVSVANSLVNMYSKMGCA 337
Query: 284 RSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGID-----DVILC 338
A +++ M D+IS ++IS A+ + +E+ +LF D++ + + D + L
Sbjct: 338 YFAREVFNDMKHLDLISWNSMISSCAQ-SSLEEESVNLFIDLLHEGLKPDHFTLASITLA 396
Query: 339 LMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK 398
C + L+ G+QIHA A K D V + ++DMY K G++ +A F+ +
Sbjct: 397 TAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAP 456
Query: 399 NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELF 458
+ ++WTS+I+G +G +A+ +Y +M+ ++P++ TF +L+ A S +G +L
Sbjct: 457 DDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLH 516
Query: 459 TDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
++I K + + +VD++A+ G +E AY + ++MN++ A LW+A+L + +GN
Sbjct: 517 ANVI-KLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIA-LWNAMLVGLAQHGN 574
Query: 519 TSLGELAARNLFD------MEPEKSVNYVVLSNIYTAAG 551
A NLF +EP++ V+++ + + + AG
Sbjct: 575 AE----EAVNLFKSMKSHGIEPDR-VSFIGILSACSHAG 608
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 108/212 (50%), Gaps = 4/212 (1%)
Query: 238 ILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
+LR ++ L+ H I+ G + L+ +L+ +Y+K GS+ SA Q++ + + D
Sbjct: 83 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142
Query: 298 IISCTALISGFA----RDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG 353
+++ A++ +A +D +++E LF+ + + L +L +C N L
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 202
Query: 354 RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKH 413
+H +A K +D V AL+++Y+K G + DA FD M +++V+ W ++ GY +
Sbjct: 203 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 262
Query: 414 GYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
G EA +L+ + G+ P++ + +L C
Sbjct: 263 GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGC 294
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 2/185 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ +L++ A Q +HA++I S+ + T ++ YAK G++ A + F
Sbjct: 492 DEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLF 551
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+M RN+ W AM+ G AQ+G E A+ +F +M G+ ++ ++ L AC+
Sbjct: 552 KKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTS 611
Query: 149 GGRMIQGSIQKGRFVE-NLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN-AMIGG 206
S+ +E + S L+D + G +++A + E + K S N A++G
Sbjct: 612 EAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGA 671
Query: 207 LAMQG 211
+QG
Sbjct: 672 CRIQG 676
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 190/572 (33%), Positives = 313/572 (54%), Gaps = 3/572 (0%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPSTY--MSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K L+ AL F + P Y LL+ C D ++ IH +ITN + +N+
Sbjct: 124 KNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVF 183
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
T V+ YAK + A K FDRMPER++VSW +I+G++QNG+ + AL + M G
Sbjct: 184 AMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEG 243
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
R + T + L A A + L G+ I G + F + + + +AL D+Y+KCG +E A
Sbjct: 244 QRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETAR 303
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
++F+ +++K VVSWN+M+ G G + + +F M+ +G+ P T+ L A
Sbjct: 304 LIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLG 363
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
+L + +H + +L L S + SLI +Y+K + A ++ ++ +S A+I
Sbjct: 364 DLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMIL 423
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
G+A++ S EA + F +M M D + ++ A ++ + IH +
Sbjct: 424 GYAQNGRVS-EALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLD 482
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
+ V AL+DMY+K G I A + FD + D++VI+W ++I GY HG G A++L+ KM
Sbjct: 483 KNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKM 542
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
K + PND+T+LS++ ACSH+GL EG F M Y + P +H+ +VDL R G+
Sbjct: 543 KKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGR 602
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
++ A++ I M I P +++ A+LGAC I+ N +GE AA+ LF++ P++ +V+L+NI
Sbjct: 603 IKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANI 662
Query: 547 YTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
Y + W + RK ME++ L+K PG S ++
Sbjct: 663 YASTSKWSKVAEVRKTMEKKGLKKTPGCSVVE 694
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 144/539 (26%), Positives = 272/539 (50%), Gaps = 23/539 (4%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
LL+ C K + H I +I NG + TK++ ++K G + A + F+ + ++
Sbjct: 55 LLELCTSMK---ELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKL 111
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG 155
+ M+ GYA+N E AL M V+ + ++ L+ C L+ G+ I G
Sbjct: 112 DALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHG 171
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD 215
+ F N+F + ++++YAKC I+DA+ +F+R+ +D+VSWN +I G + GF
Sbjct: 172 QLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKK 231
Query: 216 SFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLID 275
+ L M +G +PD TL ++L A+ LM IH I+ G ++ +L D
Sbjct: 232 ALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALAD 291
Query: 276 VYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDV 335
+Y+K GS+ +A ++ M + ++S +++ G+ ++ K A +F+ M+ + GID
Sbjct: 292 MYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEK-AIAVFEKML--EEGIDPT 348
Query: 336 ILCLM--LNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFD 393
+ +M L+ CA++ L G+ +H F + D +V N+LI MY+K + A+ F+
Sbjct: 349 GVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFN 408
Query: 394 EMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCE 453
+ + +SW ++I GYA++G EA+ + +MK GM P+ T +S++ A + +T
Sbjct: 409 NLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRH 468
Query: 454 G-WELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
W +I + + + +VD++++ G + A + ++ + + W+A++
Sbjct: 469 AKW--IHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVIT-WNAMIDG 525
Query: 513 CSIYGNTSLGELAARNLFD------MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
YG LG AA +LFD +EP + Y+ + + + +G D + K M++
Sbjct: 526 ---YGTHGLGR-AALDLFDKMKKGAVEP-NDITYLSVISACSHSGLVDEGLRHFKSMKQ 579
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 187/557 (33%), Positives = 310/557 (55%), Gaps = 1/557 (0%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
+T L C + +H+ + G E + ++ ++ YAK + A + F+
Sbjct: 243 ATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFEL 302
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+P ++V+W MISG QNG + AL +F MLRSG R + T S L A + L+ G
Sbjct: 303 LPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQG 362
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ + G I + + F+ SAL+D+Y KC + A L++ DVV + +I G +
Sbjct: 363 KEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLN 422
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
G ++ + +FR ++ Q +KP+ T+ S+L A L +IH +++ E +
Sbjct: 423 GMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVE 482
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
+L+D+YAK G + ++ ++ M D ++ ++IS F+++ +EA DLF+ M ++ +
Sbjct: 483 SALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQN-GEPQEALDLFRQMCMEGI 541
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
++V + L+ CA++ ++ G++IH K D +ALIDMYAK G + A R
Sbjct: 542 KYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALR 601
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
F+ M DKN +SW S+I+ Y HG E++ +M+ EG P+ VTFL+L+ AC+H GL
Sbjct: 602 VFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGL 661
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
EG +LF M +Y I PR EHF+C+VDL++R G+L+ A I M KP A +W A+L
Sbjct: 662 VEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALL 721
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
AC ++ N L ++A++ LF ++P S YV++SNI AG WD K R+LM++ + K
Sbjct: 722 HACRVHRNVELADIASQELFKLDPGNSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILK 781
Query: 571 NPGYSFLQSSKKNILLL 587
PGYS++ + + L +
Sbjct: 782 IPGYSWVDVNNSSHLFV 798
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 156/509 (30%), Positives = 265/509 (52%), Gaps = 10/509 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T +++ C A L+H G S++++ + +I Y+ G + AR AF
Sbjct: 140 DAHTLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAF 199
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D MP R+ V W M+ GY + G A+ +F M SG N T + L CA L
Sbjct: 200 DGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLL 259
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G + K + + V + LL +YAKC ++DAW LFE + R D+V+WN MI G
Sbjct: 260 SGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCV 319
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G D++ LF M+R G +PD TL S+L A L + ++H II+ +
Sbjct: 320 QNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAF 379
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
L +L+D+Y K +R+A LY + D++ + +ISG+ + S++A +F+ ++ +
Sbjct: 380 LVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVL-NGMSEKALQMFRYLLEQ 438
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ + V + +L CA++++L LG++IH + + V +AL+DMYAK G + +
Sbjct: 439 CIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLS 498
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ F +M K+ ++W S+I+ ++++G EA++L+++M EG+ N+VT S L AC+
Sbjct: 499 HYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASL 558
Query: 449 GLTCEGWELFTDMINKYRILPRAEHF--SCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
G E+ +I K I +A+ F S ++D++A+ G +E A + M K S W
Sbjct: 559 PAIYYGKEIHGVII-KGPI--KADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVS-W 614
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPE 535
++I+ A YG L + + L M+ E
Sbjct: 615 NSIISA---YGAHGLVKESVSFLHRMQEE 640
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 182/503 (36%), Positives = 298/503 (59%), Gaps = 5/503 (0%)
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
A K FD+MPERN+V+WT MI+ +AQ G +A+ +F M SG ++FTYSS L AC
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC---GWIEDAWILFERIERKDVVSW 200
+ L G+ + + + ++ V +L+D+YAKC G ++D+ +FE++ +V+SW
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123
Query: 201 NAMIGGLAMQGFND-DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLII 259
A+I A G D ++ LF M+ ++P+ F+ S+L+A + Q++ +
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
KLG+ S N + SLI +YA+ G + A + + + + +++S A++ G+A++ S+EAF
Sbjct: 184 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLK-SEEAF 242
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMY 379
LF ++ +GI +L+ A++ ++ G QIH K + + NALI MY
Sbjct: 243 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMY 302
Query: 380 AKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFL 439
++ G I A + F+EM D+NVISWTS+I G+AKHG+ A+E++ KM G PN++T++
Sbjct: 303 SRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYV 362
Query: 440 SLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
++L ACSH G+ EG + F M ++ I+PR EH++C+VDL R G L A I M +
Sbjct: 363 AVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPL 422
Query: 500 KPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKT 559
A +W +LGAC ++GNT LG AA + + EP+ Y++LSN++ +AG W + K
Sbjct: 423 MADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKI 482
Query: 560 RKLMEERSLRKNPGYSFLQSSKK 582
RK M+ER+L K G S+++ +
Sbjct: 483 RKSMKERNLIKEAGCSWIEVENR 505
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 217/425 (51%), Gaps = 12/425 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKV---GDVLSAR 85
D TY S+L C + +H+ +I G ++ + ++ YAK G V +R
Sbjct: 50 DRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSR 109
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGY-DENALLVFSAMLRSGVRANQFTYSSALRACARM 144
K F++MPE NV+SWTA+I+ YAQ+G D+ A+ +F M+ +R N F++SS L+AC +
Sbjct: 110 KVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNL 169
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
G + K V ++L+ +YA+ G +EDA F+ + K++VS+NA++
Sbjct: 170 SDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIV 229
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G A ++++F LF + G+ FT S+L + + K QIH ++K G +
Sbjct: 230 DGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYK 289
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
S+ + +LI +Y++ G+I +A+Q++ M ++IS T++I+GFA+ + A ++F
Sbjct: 290 SNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAK-HGFATRALEMFHK 348
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNA-LIDMYAKSG 383
M+ +++ +L+ C++V ++ G++ +K A ++D+ +SG
Sbjct: 349 MLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSG 408
Query: 384 EIADANRAFDEMG-DKNVISWTSLIAGYAKHG---YGHEAIELYKKMKHEGMVPNDVTFL 439
+ +A + M + + W +L+ HG G A E+ ++ E P L
Sbjct: 409 LLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMI--LEQEPDDPAAYILL 466
Query: 440 SLLFA 444
S L A
Sbjct: 467 SNLHA 471
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 206/451 (45%), Gaps = 54/451 (11%)
Query: 3 IVRANFKTGQL-KQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITN 59
I+ A ++G+ K+A++ + P+ ++ S+L+ C + ++++ +
Sbjct: 126 IITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKL 185
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G S + +I YA+ G + ARKAFD + E+N+VS+ A++ GYA+N E A L+F
Sbjct: 186 GIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF 245
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
+ + +G+ + FT++S L A + + G I G + KG + N + +AL+ +Y++C
Sbjct: 246 NEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRC 305
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G IE A+ +F +E ++V+SW +MI G A GF + +F M+ G KP+ T ++L
Sbjct: 306 GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVL 365
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
A H +I G + N + Y ++G I + Y M+ D++
Sbjct: 366 SACS-----------HVGMISEGQKHFNSM-------YKEHG-IVPRMEHYACMV--DLL 404
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
+ L+ EA + M L D ++ +L C + LGR
Sbjct: 405 GRSGLLV----------EAMEFINSMPLMA---DALVWRTLLGACRVHGNTELGRHAAEM 451
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVI-----SWTSL-------I 407
+ Q D A L +++A +G+ D + M ++N+I SW +
Sbjct: 452 ILE-QEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFH 510
Query: 408 AGYAKHGYG----HEAIELYKKMKHEGMVPN 434
G H E +L K+K G +P+
Sbjct: 511 VGETSHPQAWQIYQELDQLASKIKEMGYIPD 541
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A A + FD+M ++N+++WT +I +A+ G +AI+L+ M+ G VP+ T+ S+L AC
Sbjct: 2 APAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 61
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFAR---RGQLESAYNMIRQMNIKPT 502
+ GL G +L + +I L S +VD++A+ G ++ + + QM
Sbjct: 62 TELGLLALGKQLHSRVIRLGLALDVCVGCS-LVDMYAKCAADGSVDDSRKVFEQMPEHNV 120
Query: 503 ASLWSAILGA 512
S W+AI+ A
Sbjct: 121 MS-WTAIITA 129
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 179/554 (32%), Positives = 308/554 (55%), Gaps = 4/554 (0%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L D Y +++Q CI + ++HA I+ G+ +++ +ST ++ YAK+G + +
Sbjct: 218 LPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYW 277
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
F+ M E N VSW AMISG NG A +F M N +T S +A ++
Sbjct: 278 VFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVD 337
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER--IERKDVVSWNAMI 204
+ G+ +Q + N+ V +AL+D+Y+KCG + DA +F+ I WNAMI
Sbjct: 338 VNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMI 397
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G + G + ++ L+ M + G+ D +T S+ A L +H +++K GL+
Sbjct: 398 SGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLD 457
Query: 265 -SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
+ ++ D Y+K G + +++ M + DI+S T L++ +++ + +EA F
Sbjct: 458 LMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQS-SLGEEALATFC 516
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
M + + +L CA++ L GRQ+H K + + +ALIDMYAK G
Sbjct: 517 LMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCG 576
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
I +A + FD++ + +++SWT++I+GYA+HG +A++L+++M+ G+ N VT L +LF
Sbjct: 577 SITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLF 636
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
ACSH G+ EG F M + Y ++P EH++C++DL R G+L+ A IR+M ++P
Sbjct: 637 ACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNE 696
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
+W +LG C ++GN LGE+AAR + + PE S YV+LSN Y G++++ R +M
Sbjct: 697 MVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVM 756
Query: 564 EERSLRKNPGYSFL 577
+++ ++K PGYS++
Sbjct: 757 KDQGVKKEPGYSWI 770
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 146/495 (29%), Positives = 260/495 (52%), Gaps = 20/495 (4%)
Query: 34 MSLLQFCIDKKAERQAHLIHAHIITNGYESN--LHLSTKVIIFYAKVGDVLSARKAFDRM 91
+ +L+ C +K + R+A +H ++ + +E + L Y+K + +A FD M
Sbjct: 122 IDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEM 181
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P+RNV SWT MI G ++G + F ML SG+ ++F YS+ +++C + L+ G+
Sbjct: 182 PQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGK 241
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
M+ I F ++FV ++LL++YAK G IED++ +F + + VSWNAMI G G
Sbjct: 242 MVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNG 301
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
+ ++F LF M P+ +TL S+ +A +++ ++ + +LG+E + +
Sbjct: 302 LHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGT 361
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISC------TALISGFARDDNHSKEAFDLFKDM 325
+LID+Y+K GS+ A RS+ T+ I+C A+ISG+++ S+EA +L+ M
Sbjct: 362 ALIDMYSKCGSLHDA----RSVFDTNFINCGVNTPWNAMISGYSQ-SGCSQEALELYVQM 416
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYD---AAVGNALIDMYAKS 382
+ D C + N A SL GR +H K D +V NA+ D Y+K
Sbjct: 417 CQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLK--CGLDLMVVSVNNAIADAYSKC 474
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
G + D + FD M +++++SWT+L+ Y++ G EA+ + M+ EG PN TF S+L
Sbjct: 475 GFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVL 534
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
+C+ G ++ ++ K + S ++D++A+ G + A + +++ P
Sbjct: 535 ISCASLCFLEYGRQVH-GLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKIS-NPD 592
Query: 503 ASLWSAILGACSIYG 517
W+AI+ + +G
Sbjct: 593 IVSWTAIISGYAQHG 607
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 193/553 (34%), Positives = 307/553 (55%), Gaps = 42/553 (7%)
Query: 71 VIIFYAKVGDVLSARKAFDRMP-----ERNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
+I YA+ G A K F M + NVVSWTA+I+G QNGYD AL VF M+
Sbjct: 297 IISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLE 356
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIED 184
GV+ N T +SA+ AC + L+ GR I G I+ +L V ++L+D YAKC +E
Sbjct: 357 GVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEV 416
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR---- 240
A F I++ D+VSWNAM+ G A++G ++++ L M QG++PD T ++
Sbjct: 417 ARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQ 476
Query: 241 ------------------------------ASVGGIELMKIS-QIHDLIIKLGLESSNKL 269
A+ G + +K+ +IH +++ +E S +
Sbjct: 477 YGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGV 536
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+LI +Y+ S+ A ++ + D++ ++IS A+ S A DL ++M L
Sbjct: 537 GSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQS-GRSVNALDLLREMNLSN 595
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ ++ V + L C+ +A+L G++IH F + + N+LIDMY + G I +
Sbjct: 596 VEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSR 655
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
R FD M ++++SW +I+ Y HG+G +A+ L++ + G+ PN +TF +LL ACSH+G
Sbjct: 656 RIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSG 715
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
L EGW+ F M +Y + P E ++C+VDL +R GQ I +M +P A++W ++
Sbjct: 716 LIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSL 775
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
LGAC I+ N L E AAR LF++EP+ S NYV+++NIY+AAG W++A K R LM+ER +
Sbjct: 776 LGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVT 835
Query: 570 KNPGYSFLQSSKK 582
K PG S+++ +K
Sbjct: 836 KPPGCSWIEVKRK 848
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/447 (29%), Positives = 215/447 (48%), Gaps = 44/447 (9%)
Query: 21 LSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGD 80
L+ PD ++ Y S+LQ C R +HA ++ NG + L ++++ Y + G
Sbjct: 82 LTNPDECIE--IYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGC 139
Query: 81 VLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRA 140
V AR+ FD+M ERNV SWTA++ Y G E + +F M+ GVR + F + +A
Sbjct: 140 VEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKA 199
Query: 141 CARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSW 200
C+ ++ + G+ + + F N VK ++LD++ KCG ++ A FE IE KDV W
Sbjct: 200 CSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMW 259
Query: 201 NAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIK 260
N M+ G +G + M G+KPD T +I+
Sbjct: 260 NIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG------------------- 300
Query: 261 LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM-----LKTDIISCTALISGFARDDNHS 315
YA+ G A + + M K +++S TALI+G + + +
Sbjct: 301 ----------------YAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAG-SEQNGYD 343
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS-SYDAAVGNA 374
EA +F+ M+L+ + + + + ++ C N++ L GR+IH + K + D VGN+
Sbjct: 344 FEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNS 403
Query: 375 LIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
L+D YAK + A R F + +++SW +++AGYA G EAIEL +MK +G+ P+
Sbjct: 404 LVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPD 463
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDM 461
+T+ L+ + G E F M
Sbjct: 464 IITWNGLVTGFTQYGDGKAALEFFQRM 490
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 196/419 (46%), Gaps = 48/419 (11%)
Query: 108 QNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLF 167
+NG NA ++ S+M + Y+S L+ C ++ L+ G + + F
Sbjct: 66 RNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEF 125
Query: 168 VKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
+ S LL++Y + G +EDA +F+++ ++V SW A++ G +++ LF M+ +G
Sbjct: 126 LGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEG 185
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
++PD F + +A ++D ++ +G E ++ + GS++D++ K G + A
Sbjct: 186 VRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIAR 245
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
+ + + D+ ++SG+ K+A DM L + D V
Sbjct: 246 RFFEEIEFKDVFMWNIMVSGYT-SKGEFKKALKCISDMKLSGVKPDQVTW---------- 294
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-----DKNVIS 402
NA+I YA+SG+ +A++ F EMG NV+S
Sbjct: 295 -------------------------NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVS 329
Query: 403 WTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI 462
WT+LIAG ++GY EA+ +++KM EG+ PN +T S + AC++ L G E+ I
Sbjct: 330 WTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCI 389
Query: 463 NKYRILPRAEHFSCVVDLFARRGQLESA---YNMIRQMNIKPTASLWSAILGACSIYGN 518
+ + +VD +A+ +E A + MI+Q ++ W+A+L ++ G+
Sbjct: 390 KVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVS----WNAMLAGYALRGS 444
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 117/233 (50%), Gaps = 2/233 (0%)
Query: 11 GQLKQALKFSLSCPDTLLDP--STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLS 68
G K AL+F +DP +T L C + + IH +++ N E + +
Sbjct: 478 GDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVG 537
Query: 69 TKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR 128
+ +I Y+ + A F + R+VV W ++IS AQ+G NAL + M S V
Sbjct: 538 SALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVE 597
Query: 129 ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWIL 188
N T SAL AC+++ L+ G+ I I + F+ ++L+D+Y +CG I+ + +
Sbjct: 598 VNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRI 657
Query: 189 FERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
F+ + ++D+VSWN MI M GF D+ LF+ G+KP+ T ++L A
Sbjct: 658 FDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSA 710
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 102/211 (48%), Gaps = 10/211 (4%)
Query: 2 NIVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
+I+ A ++G+ AL ++ + ++ T +S L C A RQ IH II
Sbjct: 570 SIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRC 629
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G ++ + +I Y + G + +R+ FD MP+R++VSW MIS Y +G+ +A+ +F
Sbjct: 630 GLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLF 689
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGG----RMIQGSIQKGRFVENLFVKSALLDL 175
G++ N T+++ L AC+ ++ G +M++ VE + ++DL
Sbjct: 690 QXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQY---ACMVDL 746
Query: 176 YAKCGWIEDAWILFERIE-RKDVVSWNAMIG 205
++ G + E++ + W +++G
Sbjct: 747 LSRAGQFNETLEFIEKMPFEPNAAVWGSLLG 777
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 182/537 (33%), Positives = 309/537 (57%), Gaps = 3/537 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H + G ES + ++ ++ YAK + K F MP ++V+W MISG QNG+
Sbjct: 269 LHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGF 328
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ ALL+F M +SG+R + T S L A + G+ + G I + ++F+ SA
Sbjct: 329 VDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSA 388
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+D+Y KC + A +++ + DVV + MI G + G + ++ +FR ++ QG++P+
Sbjct: 389 LVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPN 448
Query: 232 CFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
+ S+L A + MK+ Q +H +K E + +L+D+YAK G + ++ ++
Sbjct: 449 AVAIASVLPA-CASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIF 507
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
+ D ++ ++IS FA++ +EA +LF++M ++ + +V + +L+ CA++ ++
Sbjct: 508 SKISAKDEVTWNSMISSFAQN-GEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAI 566
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
G++IH K D +ALIDMY K G + A+R F+ M +KN +SW S+IA Y
Sbjct: 567 YYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASY 626
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
+G E++ L + M+ EG + VTFL+L+ AC+H G EG LF M +Y+I PR
Sbjct: 627 GAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPR 686
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
EHF+C+VDL++R G+L+ A +I M KP A +W A+L AC ++ N L E+A++ LF
Sbjct: 687 MEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELF 746
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKNILLL 587
++P S YV++SNI AG WD K R+LM++ ++K PGYS++ + + L +
Sbjct: 747 KLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFV 803
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 155/524 (29%), Positives = 268/524 (51%), Gaps = 17/524 (3%)
Query: 3 IVRANFKTGQLKQALKFSL------SCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHI 56
++R G + AL F L S P L D T+ +++ C A L+H
Sbjct: 115 LIRGLTMAGDYRSALLFYLKMWAHPSAP--LPDSHTFPYVVKSCAALGAIALGRLVHRTA 172
Query: 57 ITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENAL 116
T G + ++ + + +I YA G + AR+ FD M ER+ V W M+ GY + G +A+
Sbjct: 173 RTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAV 232
Query: 117 LVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLY 176
+F M SG N T + L A L G + K + V + L+ +Y
Sbjct: 233 ELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMY 292
Query: 177 AKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLG 236
AKC ++D W LF + R D+V+WN MI G GF D + LF M + G++PD TL
Sbjct: 293 AKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLV 352
Query: 237 SILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT 296
S+L A + ++H I++ + L +L+D+Y K ++R A +Y S
Sbjct: 353 SLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAI 412
Query: 297 DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI 356
D++ + +ISG+ + S+EA +F+ ++ + + + V + +L CA++A++ LG+++
Sbjct: 413 DVVIGSTMISGYVL-NGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQEL 471
Query: 357 HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYG 416
H++A K V +AL+DMYAK G + ++ F ++ K+ ++W S+I+ +A++G
Sbjct: 472 HSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEP 531
Query: 417 HEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP-RAEHF- 474
EA+ L+++M EG+ ++VT S+L AC+ G E+ +I P RA+ F
Sbjct: 532 EEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKG----PIRADLFA 587
Query: 475 -SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
S ++D++ + G LE A+ + M K S W++I+ + YG
Sbjct: 588 ESALIDMYGKCGNLEWAHRVFESMPEKNEVS-WNSIIASYGAYG 630
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 185/371 (49%), Gaps = 2/371 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T +SLL D Q +H +I+ N ++ L + ++ Y K V A+ +
Sbjct: 347 DSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVY 406
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D +VV + MISGY NG + A+ +F +L G+R N +S L ACA M ++
Sbjct: 407 DSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMK 466
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ + K + +V+SAL+D+YAKCG ++ + +F +I KD V+WN+MI A
Sbjct: 467 LGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFA 526
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G +++ LFR M +G+K T+ S+L A + +IH ++IK + +
Sbjct: 527 QNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLF 586
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+LID+Y K G++ A++++ SM + + +S ++I+ + KE+ L + M +
Sbjct: 587 AESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGA-YGLVKESVSLLRHMQEE 645
Query: 329 KMGIDDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
D V +++ CA+ + G R +YQ + ++D+Y+++G++
Sbjct: 646 GFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDK 705
Query: 388 ANRAFDEMGDK 398
A +M K
Sbjct: 706 AMELIVDMPFK 716
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 189/557 (33%), Positives = 299/557 (53%), Gaps = 3/557 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T SLL C R+ +H++++ G + + ++ Y K GD+ A + F
Sbjct: 243 DSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIF 302
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D NVV W M+ Y Q + +F ML +GVR N+FTY LR C +
Sbjct: 303 DSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIG 362
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G I K F +++V L+D+Y+K GW++ A + + IE KDVVSW +MI G
Sbjct: 363 LGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYV 422
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
F ++ F+ M G+ PD L S + A G + + SQIH + G +
Sbjct: 423 QHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVS 482
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ L+ +YA+ G + A+ + ++ + I+ LISGFA+ + +EA +F M
Sbjct: 483 IWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLY-EEALKVFMKMDQA 541
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ ++ AN+A + G+QIHA K + + + NALI +Y K G I DA
Sbjct: 542 GAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDA 601
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
F EM +N +SW ++I ++HG G EA++L+ +MK +G+ P+DVTF+ +L ACSH
Sbjct: 602 KMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHV 661
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
GL EG F M N++ I PR +H++CVVD+ R GQL+ A + +M I + +W
Sbjct: 662 GLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRT 721
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L AC ++ N +GE AA++L ++EP S +YV+LSN Y G W + + RK+M++R +
Sbjct: 722 LLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGV 781
Query: 569 RKNPGYSFLQSSKKNIL 585
RK PG S+++ KN++
Sbjct: 782 RKEPGRSWIEV--KNVV 796
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 136/395 (34%), Positives = 211/395 (53%), Gaps = 1/395 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IHA I G + +I YAK G V AR+ F+ + R+ VSW A++SGYAQNG
Sbjct: 64 IHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGL 123
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
E A+ ++ M RSGV + SS L AC + Q GR+I + K F FV +A
Sbjct: 124 GEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNA 183
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+ LY +C A +F + D V++N +I G A G D + +F M G+ PD
Sbjct: 184 LISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPD 243
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
T+ S+L A +L K Q+H ++K G+ + GSL+D+Y K G I A Q++
Sbjct: 244 SVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFD 303
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
S +T+++ ++ + + D+ +K +FD+F M+ + + ML C + +
Sbjct: 304 SGDRTNVVLWNLMLVAYGQIDDLAK-SFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIG 362
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
LG QIH+ K D V LIDMY+K G + A R D + +K+V+SWTS+IAGY
Sbjct: 363 LGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYV 422
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
+H + EA+E +K+M+ G+ P+++ S + AC+
Sbjct: 423 QHEFCKEALETFKEMQACGIWPDNIGLASAISACA 457
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 152/515 (29%), Positives = 266/515 (51%), Gaps = 15/515 (2%)
Query: 30 PSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
P+ Y+ S+L C + + LIH + G+ S + +I Y + A +
Sbjct: 141 PTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRV 200
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F M + V++ +ISG+AQ G+ + AL +F M SG+ + T +S L AC+ + L
Sbjct: 201 FCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDL 260
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G+ + + K + ++ +LLDLY K G IE+A +F+ +R +VV WN M L
Sbjct: 261 RKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLM---L 317
Query: 208 AMQGFNDD---SFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G DD SF +F M+ G++P+ FT +LR E+ QIH L IK G +
Sbjct: 318 VAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQ 377
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
S ++G LID+Y+KYG + A ++ + + D++S T++I+G+ + + KEA + FK+
Sbjct: 378 SDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHE-FCKEALETFKE 436
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M + D++ L ++ CA + +++ G QIHA + S D ++ N L+ +YA+ G
Sbjct: 437 MQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGI 496
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+A +F+ + K I+W LI+G+A+ G EA++++ KM G N TF+S + A
Sbjct: 497 SKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISA 556
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
++ +G ++ +I K E + ++ L+ + G +E A +M + S
Sbjct: 557 SANLADIKQGKQIHARVI-KTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVS 615
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVN 539
W+ I+ CS +G L A +LFD ++ +
Sbjct: 616 -WNTIITCCSQHGRG----LEALDLFDQMKQQGLK 645
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 124/428 (28%), Positives = 209/428 (48%), Gaps = 15/428 (3%)
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC--ARMRWLQ 148
M R S+ ++G+ E L +F+A R + ++ ALRAC + RW
Sbjct: 1 MTPRGAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPL 60
Query: 149 GGRMIQGSIQKG----RFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
+ +I G R + NL L+DLYAK G++ A +FE + +D VSW A++
Sbjct: 61 VPEIHAKAIICGLSGYRIIGNL-----LIDLYAKKGFVRRARRVFEELSVRDNVSWVAVL 115
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGL 263
G A G +++ L+R M R G+ P + L SIL A EL ++ + IH + K G
Sbjct: 116 SGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACT-KTELFQLGRLIHVQVYKQGF 174
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
S + +LI +Y + S R A +++ ML D ++ LISG A+ H A +F
Sbjct: 175 FSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQ-CGHGDRALGIFD 233
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
+M L + D V + +L C+ V L G+Q+H++ K S D + +L+D+Y KSG
Sbjct: 234 EMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSG 293
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
+I +A + FD NV+ W ++ Y + ++ +++ +M G+ PN T+ +L
Sbjct: 294 DIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLR 353
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
C+HTG G ++ + I K ++D++++ G L+ A ++ + K
Sbjct: 354 TCTHTGEIGLGEQIHSLTI-KNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVV 412
Query: 504 SLWSAILG 511
S S I G
Sbjct: 413 SWTSMIAG 420
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 185/415 (44%), Gaps = 48/415 (11%)
Query: 195 KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG-GIELMKISQ 253
+ S+N + G + LF + RQ M LRA G G + +
Sbjct: 4 RGAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPLVPE 63
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN 313
IH I GL + LID+YAK G +R A +++ + D +S A++SG+A+ +
Sbjct: 64 IHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQ-NG 122
Query: 314 HSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN 373
+EA L+++M + +L +L+ C LGR IH +K + VGN
Sbjct: 123 LGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGN 182
Query: 374 ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP 433
ALI +Y + A+R F +M + +++ +LI+G+A+ G+G A+ ++ +M+ G+ P
Sbjct: 183 ALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSP 242
Query: 434 NDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLES---- 489
+ VT SLL ACS G +G +L + ++ L S ++DL+ + G +E
Sbjct: 243 DSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGS-LLDLYVKSGDIEEALQI 301
Query: 490 -----------------AYNMIRQM-------------NIKPTASLWSAILGACSIYGNT 519
AY I + ++P + +L C+ G
Sbjct: 302 FDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEI 361
Query: 520 SLGE----LAARNLFDMEPEKSVNYV--VLSNIYTAAGAWDNARKTRKLMEERSL 568
LGE L +N F +S YV VL ++Y+ G D A++ ++EE+ +
Sbjct: 362 GLGEQIHSLTIKNGF-----QSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDV 411
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 182/533 (34%), Positives = 307/533 (57%), Gaps = 7/533 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IHA ++ G+E+ + +I +K G + AR FD M ++ VSW +MI+G+ NG
Sbjct: 225 IHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQ 284
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
D A F+ M +G + T++S +++CA ++ L R++ K N V +A
Sbjct: 285 DLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTA 344
Query: 172 LLDLYAKCGWIEDAWILFERIER-KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
L+ KC I+DA+ LF + + VVSW AMI G G D + LF M R+G+KP
Sbjct: 345 LMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKP 404
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
+ FT +IL + IS+IH +IK E S+ + +L+D + K G+I A +++
Sbjct: 405 NHFTYSTILTVQ----HAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVF 460
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNIC-ANVAS 349
+ D+I+ +A+++G+A+ ++EA +F + + + ++ C ++N C A AS
Sbjct: 461 ELIETKDVIAWSAMLAGYAQA-GETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTAS 519
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
+ G+Q HA+A K + + V ++L+ +YAK G I A+ F +++++SW S+I+G
Sbjct: 520 VEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISG 579
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
YA+HG +A+E++++M+ + + +TF+ ++ AC+H GL +G F MIN + I P
Sbjct: 580 YAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINP 639
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
EH+SC++DL++R G L A ++I M P A++W +L A ++ N LG+LAA +
Sbjct: 640 TMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKI 699
Query: 530 FDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+EP+ S YV+LSNIY AAG W RKLM++R ++K PGYS+++ K
Sbjct: 700 ISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNK 752
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 147/533 (27%), Positives = 269/533 (50%), Gaps = 22/533 (4%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ Q ++AL +S + L P +Y +L C +H + G +L
Sbjct: 79 RCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLS 138
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ ++ Y K G+V R+ FD M +R+VVSW ++++GY+ N +++ +F M G
Sbjct: 139 VGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEG 198
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
R + +T S+ + A A + G I + K F V ++L+ + +K G + DA
Sbjct: 199 YRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDAR 258
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
++F+ +E KD VSWN+MI G + G + ++F F +M G KP T S++++
Sbjct: 259 VVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLK 318
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD-IISCTALI 305
EL + +H +K GL ++ + +L+ K I A+ L+ M ++S TA+I
Sbjct: 319 ELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMI 378
Query: 306 SGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS 365
SG+ ++ + + +A +LF M + + + +L + V +IHA K
Sbjct: 379 SGYLQNGD-TDQAVNLFSLMRREGVKPNHFTYSTILTVQHAV----FISEIHAEVIKTNY 433
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKK 425
++VG AL+D + K G I+DA + F+ + K+VI+W++++AGYA+ G EA +++ +
Sbjct: 434 EKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQ 493
Query: 426 MKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV----VDLF 481
+ EG+ PN+ TF S++ AC+ + E + F + Y I R + CV V L+
Sbjct: 494 LTREGIKPNEFTFCSIINACTAPTASVEQGKQF----HAYAIKLRLNNALCVSSSLVTLY 549
Query: 482 ARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTS-----LGELAARNL 529
A+RG +ESA+ + ++ + S W++++ + +G E+ RNL
Sbjct: 550 AKRGNIESAHEIFKRQKERDLVS-WNSMISGYAQHGQAKKALEVFEEMQKRNL 601
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 132/467 (28%), Positives = 225/467 (48%), Gaps = 20/467 (4%)
Query: 62 ESNLHLSTKVIIFYAKV----GDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALL 117
+N L + V+ A+ D A++ FD+ P R++ ++ Y++ + AL
Sbjct: 29 HANPLLQSHVVALNARTLLRDSDPRFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALH 88
Query: 118 VFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYA 177
+F ++ RSG+ + +T S L CA G + K V +L V ++L+D+Y
Sbjct: 89 LFVSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYT 148
Query: 178 KCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGS 237
K G + D +F+ + +DVVSWN+++ G + FND + LF M +G +PD +T+ +
Sbjct: 149 KTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVST 208
Query: 238 ILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
++ A + QIH L++KLG E+ + SLI + +K G +R A ++ +M D
Sbjct: 209 VIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKD 268
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
+S ++I+G + EAF+ F +M L ++ CA++ L L R +H
Sbjct: 269 SVSWNSMIAGHVI-NGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLH 327
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEM-GDKNVISWTSLIAGYAKHGYG 416
K S + V AL+ K EI DA F M G ++V+SWT++I+GY ++G
Sbjct: 328 CKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDT 387
Query: 417 HEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSC 476
+A+ L+ M+ EG+ PN T+ S + H +F I+ I E S
Sbjct: 388 DQAVNLFSLMRREGVKPNHFTY-STILTVQHA--------VFISEIHAEVIKTNYEKSSS 438
Query: 477 V----VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNT 519
V +D F + G + A + + K + WSA+L + G T
Sbjct: 439 VGTALLDAFVKIGNISDAVKVFELIETKDVIA-WSAMLAGYAQAGET 484
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 24/191 (12%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAE-RQAHLIHAHIITNGYESNL 65
+ G+ ++A K + P+ T+ S++ C A Q HA+ I + L
Sbjct: 480 QAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNAL 539
Query: 66 HLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
+S+ ++ YAK G++ SA + F R ER++VSW +MISGYAQ+G + AL VF M +
Sbjct: 540 CVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKR 599
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK-----------SALLD 174
+ + T+ + ACA G + KG+ N+ + S ++D
Sbjct: 600 NLEVDAITFIGVISACAH----------AGLVGKGQNYFNIMINDHHINPTMEHYSCMID 649
Query: 175 LYAKCGWIEDA 185
LY++ G + A
Sbjct: 650 LYSRAGMLGKA 660
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 195/555 (35%), Positives = 306/555 (55%), Gaps = 2/555 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY S+L+ C + +IH ++ G ++ + + ++ YAK + A K F
Sbjct: 105 DSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLF 164
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D MP+++V W +IS Y Q+G E AL F M R G + T ++A+ +CAR+ L
Sbjct: 165 DEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLD 224
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
GR I + F + FV +AL+D+Y KCG +E A +FE++ K VV+WN+MI G
Sbjct: 225 RGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYG 284
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
+G LF+ M +G+KP TL S L A +L++ +H II+ ++
Sbjct: 285 FKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIF 344
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
L SL+D+Y K G + SA +++ M KT +S +ISG+ + +A LF +M
Sbjct: 345 LNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVT-EGKLFDALRLFGEMSKS 403
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ D + +L C+ +A+L GR+IH + + V AL+DMYAK G + +A
Sbjct: 404 FVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEA 463
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
F + +++++SWTS+I Y HG +EA+EL+ +M + P+ VTFL++L ACSH
Sbjct: 464 FGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHA 523
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIR-QMNIKPTASLWS 507
GL +G F MIN Y I+PR EH+SC++ L R G+L AY +++ I L S
Sbjct: 524 GLVDDGLYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLS 583
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
+ AC ++ N LG A NL D +P+ S Y++LSN+Y + G WD R R M++
Sbjct: 584 TLFSACRLHKNLDLGVEIAENLIDKDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLG 643
Query: 568 LRKNPGYSFLQSSKK 582
L+KNPG S+++ ++K
Sbjct: 644 LKKNPGCSWIEINEK 658
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 206/645 (31%), Positives = 347/645 (53%), Gaps = 71/645 (11%)
Query: 3 IVRANFKTGQLKQALKFSLSC----PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIIT 58
++R + K G+L A+ ++SC T D T +L+ C + + R H I
Sbjct: 133 LIREHIKQGRLDSAI--NVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICC 190
Query: 59 NGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER---NVVSWTAMISGYAQNGYDENA 115
NG+ESN+ + ++ Y++ G + A FD + +R +V+SW +++S + ++ A
Sbjct: 191 NGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTA 250
Query: 116 LLVFSAML------RSGVRANQFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFV 168
L +FS M + R++ + + L AC ++ + + + G +I+ G F ++FV
Sbjct: 251 LDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTF-PDVFV 309
Query: 169 KSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSF----------- 217
+AL+D YAKCG +E+A +F +E KDVVSWNAM+ G + G + +F
Sbjct: 310 GNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENI 369
Query: 218 ------W------------------LFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ 253
W LFR M+ G P+C T+ S+L A + ++
Sbjct: 370 PLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTE 429
Query: 254 IHDLIIK---------LGLESSNKLT-GSLIDVYAKYGSIRSAYQLYR--SMLKTDIISC 301
IH +K G E + + +LID+Y+K S ++A ++ + + ++++
Sbjct: 430 IHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTW 489
Query: 302 TALISGFARDDNHSKEAFDLFKDMILKKMGIDD---VILCLMLNICANVASLNLGRQIHA 358
T +I G A+ + S +A LF +MI + G+ I C+++ CA++A++ +G+QIHA
Sbjct: 490 TVMIGGHAQYGD-SNDALKLFVEMISEPYGVAPNAYTISCILM-ACAHLAAIRIGKQIHA 547
Query: 359 FAFKYQSSYDAA--VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYG 416
+ ++ +A V N LIDMY+K G++ A FD M K+ ISWTS++ GY HG G
Sbjct: 548 YVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRG 607
Query: 417 HEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSC 476
EA++++ KM+ G VP+D+TFL +L+ACSH G+ +G F M Y + PRAEH++C
Sbjct: 608 SEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAC 667
Query: 477 VVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEK 536
+DL AR G+L+ A+ ++ M ++PTA +W A+L AC ++ N L E A L +M E
Sbjct: 668 AIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAEN 727
Query: 537 SVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSK 581
+Y ++SNIY AG W + + R LM++ ++K PG S++Q K
Sbjct: 728 DGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQK 772
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 146/580 (25%), Positives = 267/580 (46%), Gaps = 86/580 (14%)
Query: 30 PSTYMSLLQFCIDKKAERQAHLIHAHIITNG--------------------YESNLHLST 69
PS + SLL+ C K+ H IH II +G + S L T
Sbjct: 44 PSHFASLLKEC---KSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGT 100
Query: 70 KVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA 129
V+ Y G A +R+ V W +I + + G ++A+ V MLR+G R
Sbjct: 101 GVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRP 160
Query: 130 NQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILF 189
+ FT L+AC + + G G I F N+F+ +AL+ +Y++CG +E+A ++F
Sbjct: 161 DHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIF 220
Query: 190 ERIERK---DVVSWNAMIGGLAMQGFNDDSFWLFRSMM------RQGMKPDCFTLGSILR 240
+ I ++ DV+SWN+++ + LF M + D ++ +IL
Sbjct: 221 DEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILP 280
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
A + + ++H I+ G + +LID YAK G + +A +++ M D++S
Sbjct: 281 ACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVS 340
Query: 301 CTALISGFARDDNH----------------------------------SKEAFDLFKDMI 326
A+++G+++ N S EA +LF+ MI
Sbjct: 341 WNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMI 400
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY----------QSSYDAAVGNALI 376
+ V + +L+ CA++ + + G +IHA++ K D V NALI
Sbjct: 401 FSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALI 460
Query: 377 DMYAKSGEIADANRAFDEMG--DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE--GMV 432
DMY+K A FD++ ++NV++WT +I G+A++G ++A++L+ +M E G+
Sbjct: 461 DMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVA 520
Query: 433 PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFS-CVVDLFARRGQLESAY 491
PN T +L AC+H G ++ ++ +R A + C++D++++ G +++A
Sbjct: 521 PNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTAR 580
Query: 492 NMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
++ M+ K S W++++ ++G S A ++FD
Sbjct: 581 HVFDSMSQKSAIS-WTSMMTGYGMHGRGS----EALDIFD 615
>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
Length = 766
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 191/581 (32%), Positives = 323/581 (55%), Gaps = 5/581 (0%)
Query: 2 NIVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
+++ A+ + G+ AL S+ T D S ++ C + +HAH + +
Sbjct: 122 SVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKS 181
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
S+L + ++ Y+K G V F+R+ +++++SW ++I+G+AQ G++ AL VF
Sbjct: 182 ERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVF 241
Query: 120 SAMLRSGVR-ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
M+ G N+F + SA RAC + + G I G K R +L+V +L D+YA+
Sbjct: 242 REMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYAR 301
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
C ++ A + F RIE D+VSWN+++ +++G ++ LF M G++PD T+ +
Sbjct: 302 CKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGL 361
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
L A VG L IH ++KLGL+ + SL+ +YA+ + SA ++ + D+
Sbjct: 362 LCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDV 421
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
++ ++++ A+ NH +E LF + + +D + L +L+ A + + +Q+HA
Sbjct: 422 VTWNSILTACAQH-NHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHA 480
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD-KNVISWTSLIAGYAKHGYGH 417
+AFK D + N LID YAK G + DA R F+ MG+ ++V SW+SLI GYA+ GY
Sbjct: 481 YAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAK 540
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
EA +L+ +M+ G+ PN VTF+ +L ACS G EG ++ M +Y I+P EH SC+
Sbjct: 541 EAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCI 600
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKS 537
VDL AR G+L A N I QM +P +W +L A ++ + +G+ AA + +++P S
Sbjct: 601 VDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHS 660
Query: 538 VNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
YV+L NIY A+G W+ + +K M ++K+PG S+++
Sbjct: 661 AAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVK 701
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 146/500 (29%), Positives = 260/500 (52%), Gaps = 24/500 (4%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYES-------NLHLSTKVIIFYAKVGDVLSAR 85
Y +L+ C ++ Q +H H++ + S N L +I Y + SAR
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
+ FD MP RN VSW ++I+ + QNG +AL +FS+MLRSG A+QF SA+RAC +
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
+ GR + K +L V++AL+ +Y+K G ++D ++LFERI+ KD++SW ++I
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 226
Query: 206 GLAMQGFNDDSFWLFRSMMRQG-MKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLG 262
G A QGF ++ +FR M+ +G P+ F GS RA +VG E + QIH L IK
Sbjct: 227 GFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGE--QIHGLSIKYR 284
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
L+ + SL D+YA+ ++ SA + + D++S ++++ ++ + S EA LF
Sbjct: 285 LDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLS-EALVLF 343
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
+M + D + + +L C +L GR IH++ K D +V N+L+ MYA+
Sbjct: 344 SEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARC 403
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
+++ A F E+ D++V++W S++ A+H + E ++L+ + + ++ ++L
Sbjct: 404 SDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVL 463
Query: 443 FACSHTGL-----TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
A + G + +++ R+L + ++D +A+ G L+ A + M
Sbjct: 464 SASAELGYFEMVKQVHAYAFKAGLVDD-RMLS-----NTLIDTYAKCGSLDDAMRLFEIM 517
Query: 498 NIKPTASLWSAILGACSIYG 517
WS+++ + +G
Sbjct: 518 GNNRDVFSWSSLIVGYAQFG 537
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 206/645 (31%), Positives = 347/645 (53%), Gaps = 71/645 (11%)
Query: 3 IVRANFKTGQLKQALKFSLSC----PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIIT 58
++R + K G+L A+ ++SC T D T +L+ C + + R H I
Sbjct: 126 LIREHIKQGRLDSAI--NVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICC 183
Query: 59 NGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER---NVVSWTAMISGYAQNGYDENA 115
NG+ESN+ + ++ Y++ G + A FD + +R +V+SW +++S + ++ A
Sbjct: 184 NGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTA 243
Query: 116 LLVFSAML------RSGVRANQFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFV 168
L +FS M + R++ + + L AC ++ + + + G +I+ G F ++FV
Sbjct: 244 LDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTF-PDVFV 302
Query: 169 KSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSF----------- 217
+AL+D YAKCG +E+A +F +E KDVVSWNAM+ G + G + +F
Sbjct: 303 GNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENI 362
Query: 218 ------W------------------LFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ 253
W LFR M+ G P+C T+ S+L A + ++
Sbjct: 363 PLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTE 422
Query: 254 IHDLIIK---------LGLESSNKLT-GSLIDVYAKYGSIRSAYQLYR--SMLKTDIISC 301
IH +K G E + + +LID+Y+K S ++A ++ + + ++++
Sbjct: 423 IHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTW 482
Query: 302 TALISGFARDDNHSKEAFDLFKDMILKKMGIDD---VILCLMLNICANVASLNLGRQIHA 358
T +I G A+ + S +A LF +MI + G+ I C+++ CA++A++ +G+QIHA
Sbjct: 483 TVMIGGHAQYGD-SNDALKLFVEMISEPYGVAPNAYTISCILM-ACAHLAAIRIGKQIHA 540
Query: 359 FAFKYQSSYDAA--VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYG 416
+ ++ +A V N LIDMY+K G++ A FD M K+ ISWTS++ GY HG G
Sbjct: 541 YVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRG 600
Query: 417 HEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSC 476
EA++++ KM+ G VP+D+TFL +L+ACSH G+ +G F M Y + PRAEH++C
Sbjct: 601 SEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAC 660
Query: 477 VVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEK 536
+DL AR G+L+ A+ ++ M ++PTA +W A+L AC ++ N L E A L +M E
Sbjct: 661 AIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAEN 720
Query: 537 SVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSK 581
+Y ++SNIY AG W + + R LM++ ++K PG S++Q K
Sbjct: 721 DGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQK 765
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 146/580 (25%), Positives = 267/580 (46%), Gaps = 86/580 (14%)
Query: 30 PSTYMSLLQFCIDKKAERQAHLIHAHIITNG--------------------YESNLHLST 69
PS + SLL+ C K+ H IH II +G + S L T
Sbjct: 37 PSHFASLLKEC---KSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGT 93
Query: 70 KVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA 129
V+ Y G A +R+ V W +I + + G ++A+ V MLR+G R
Sbjct: 94 GVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRP 153
Query: 130 NQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILF 189
+ FT L+AC + + G G I F N+F+ +AL+ +Y++CG +E+A ++F
Sbjct: 154 DHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIF 213
Query: 190 ERIERK---DVVSWNAMIGGLAMQGFNDDSFWLFRSMM------RQGMKPDCFTLGSILR 240
+ I ++ DV+SWN+++ + LF M + D ++ +IL
Sbjct: 214 DEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILP 273
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
A + + ++H I+ G + +LID YAK G + +A +++ M D++S
Sbjct: 274 ACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVS 333
Query: 301 CTALISGFARDDNH----------------------------------SKEAFDLFKDMI 326
A+++G+++ N S EA +LF+ MI
Sbjct: 334 WNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMI 393
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY----------QSSYDAAVGNALI 376
+ V + +L+ CA++ + + G +IHA++ K D V NALI
Sbjct: 394 FSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALI 453
Query: 377 DMYAKSGEIADANRAFDEMG--DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE--GMV 432
DMY+K A FD++ ++NV++WT +I G+A++G ++A++L+ +M E G+
Sbjct: 454 DMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVA 513
Query: 433 PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFS-CVVDLFARRGQLESAY 491
PN T +L AC+H G ++ ++ +R A + C++D++++ G +++A
Sbjct: 514 PNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTAR 573
Query: 492 NMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
++ M+ K S W++++ ++G S A ++FD
Sbjct: 574 HVFDSMSQKSAIS-WTSMMTGYGMHGRGS----EALDIFD 608
>gi|224122888|ref|XP_002318941.1| predicted protein [Populus trichocarpa]
gi|222857317|gb|EEE94864.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 201/517 (38%), Positives = 294/517 (56%), Gaps = 9/517 (1%)
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
L+T ++ Y + G AR FD MPER+VV+WT MISGY A VF M+++G
Sbjct: 46 LATDLLKSYFERGLTSQARNLFDEMPERDVVAWTTMISGYTHCNEYTQAWSVFVDMVKNG 105
Query: 127 V-RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVEN-LFVKSALLDLYAKCG-WIE 183
N FT SS L+AC M+ + GR++ G K RF+E ++V +AL+D+YA CG +
Sbjct: 106 NDPPNAFTISSVLKACKGMKRVFCGRLVHGLAIKRRFMEGFIYVDNALMDMYASCGVGMR 165
Query: 184 DAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG--MKPDCFTLGSILRA 241
DA ++F I+ K+VVSW +I G +G + + +FR M+ G + P ++ A
Sbjct: 166 DACVVFHDIKEKNVVSWTTLIAGYTHRGNGNRALQIFREMLLDGVALNPHSISIAVRACA 225
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC 301
S+G + QIH +IK G ES +T S++D+Y + G + A + + M + D+I+
Sbjct: 226 SIGSQNFGR--QIHTAVIKHGFESDLPVTNSILDMYCRCGCLSEANKYFNDMTEKDLITW 283
Query: 302 TALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF 361
LI+G+ R D S E F +F M + + ++ CAN A+L G+Q+H F
Sbjct: 284 NTLIAGYERSD--SIEPFFIFSQMESEGFSPNCFTFTSLVAACANAAALQCGQQVHGGIF 341
Query: 362 KYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIE 421
+ + + NALIDMYAK G I D+ + F EM N++SWTS++ GY HGYG EA+E
Sbjct: 342 RRGLDGNLELANALIDMYAKCGNIIDSQKNFSEMSCTNLVSWTSMMIGYGTHGYGKEAVE 401
Query: 422 LYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLF 481
L+ +M G+ P+ V F+++L ACSH GL +G MIN Y I P E + CVVDL
Sbjct: 402 LFDEMVRSGIRPDQVVFMAVLHACSHAGLVDQGLRYINCMINDYHIKPNQEIYGCVVDLL 461
Query: 482 ARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYV 541
R G++E AY +IR M S+W A+LGAC + + LG+LAA+ + P YV
Sbjct: 462 GRPGRVEDAYQLIRSMPFMADESVWGALLGACKAHNFSRLGKLAAKKALALRPNMVETYV 521
Query: 542 VLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+LSNIY A G W A + RKLM+ RK G S+++
Sbjct: 522 MLSNIYAAEGKWGEAARMRKLMKRAGCRKVAGRSWIE 558
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 145/267 (54%), Gaps = 2/267 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L+P + ++ C ++ IH +I +G+ES+L ++ ++ Y + G + A K
Sbjct: 212 LNPHSISIAVRACASIGSQNFGRQIHTAVIKHGFESDLPVTNSILDMYCRCGCLSEANKY 271
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F+ M E+++++W +I+GY ++ E +FS M G N FT++S + ACA L
Sbjct: 272 FNDMTEKDLITWNTLIAGYERSDSIE-PFFIFSQMESEGFSPNCFTFTSLVAACANAAAL 330
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
Q G+ + G I + NL + +AL+D+YAKCG I D+ F + ++VSW +M+ G
Sbjct: 331 QCGQQVHGGIFRRGLDGNLELANALIDMYAKCGNIIDSQKNFSEMSCTNLVSWTSMMIGY 390
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESS 266
G+ ++ LF M+R G++PD ++L A S G+ + I+ +I ++ +
Sbjct: 391 GTHGYGKEAVELFDEMVRSGIRPDQVVFMAVLHACSHAGLVDQGLRYINCMINDYHIKPN 450
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSM 293
++ G ++D+ + G + AYQL RSM
Sbjct: 451 QEIYGCVVDLLGRPGRVEDAYQLIRSM 477
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 95/184 (51%), Gaps = 2/184 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ SL+ C + A + +H I G + NL L+ +I YAK G+++ ++K F M
Sbjct: 316 TFTSLVAACANAAALQCGQQVHGGIFRRGLDGNLELANALIDMYAKCGNIIDSQKNFSEM 375
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL-QGG 150
N+VSWT+M+ GY +GY + A+ +F M+RSG+R +Q + + L AC+ + QG
Sbjct: 376 SCTNLVSWTSMMIGYGTHGYGKEAVELFDEMVRSGIRPDQVVFMAVLHACSHAGLVDQGL 435
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGGLAM 209
R I I N + ++DL + G +EDA+ L + D W A++G
Sbjct: 436 RYINCMINDYHIKPNQEIYGCVVDLLGRPGRVEDAYQLIRSMPFMADESVWGALLGACKA 495
Query: 210 QGFN 213
F+
Sbjct: 496 HNFS 499
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 182/537 (33%), Positives = 309/537 (57%), Gaps = 3/537 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H + G ES + ++ ++ YAK + K F MP ++V+W MISG QNG+
Sbjct: 269 LHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGF 328
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ ALL+F M +SG+R + T S L A + G+ + G I + ++F+ SA
Sbjct: 329 VDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSA 388
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+D+Y KC + A +++ + DVV + MI G + G + ++ +FR ++ QG++P+
Sbjct: 389 LVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPN 448
Query: 232 CFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
+ S+L A + MK+ Q +H +K E + +L+D+YAK G + ++ ++
Sbjct: 449 AVAIASVLPA-CASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIF 507
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
+ D ++ ++IS FA++ +EA +LF++M ++ + +V + +L+ CA++ ++
Sbjct: 508 SKISAKDEVTWNSMISSFAQN-GEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAI 566
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
G++IH K D +ALIDMY K G + A+R F+ M +KN +SW S+IA Y
Sbjct: 567 YYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASY 626
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
+G E++ L + M+ EG + VTFL+L+ AC+H G EG LF M +Y+I PR
Sbjct: 627 GAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPR 686
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
EHF+C+VDL++R G+L+ A +I M KP A +W A+L AC ++ N L E+A++ LF
Sbjct: 687 MEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELF 746
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKNILLL 587
++P S YV++SNI AG WD K R+LM++ ++K PGYS++ + + L +
Sbjct: 747 KLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFV 803
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 155/524 (29%), Positives = 268/524 (51%), Gaps = 17/524 (3%)
Query: 3 IVRANFKTGQLKQALKFSL------SCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHI 56
++R G + AL F L S P L D T+ +++ C A L+H
Sbjct: 115 LIRGLTMAGDYRSALLFYLKMWAHPSAP--LPDSHTFPYVVKSCAALGAIALGRLVHRTA 172
Query: 57 ITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENAL 116
T G + ++ + + +I YA G + AR+ FD M ER+ V W M+ GY + G +A+
Sbjct: 173 RTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAV 232
Query: 117 LVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLY 176
+F M SG N T + L A L G + K + V + L+ +Y
Sbjct: 233 ELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMY 292
Query: 177 AKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLG 236
AKC ++D W LF + R D+V+WN MI G GF D + LF M + G++PD TL
Sbjct: 293 AKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLV 352
Query: 237 SILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT 296
S+L A + ++H I++ + L +L+D+Y K ++R A +Y S
Sbjct: 353 SLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAI 412
Query: 297 DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI 356
D++ + +ISG+ + S+EA +F+ ++ + + + V + +L CA++A++ LG+++
Sbjct: 413 DVVIGSTMISGYVL-NGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQEL 471
Query: 357 HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYG 416
H++A K V +AL+DMYAK G + ++ F ++ K+ ++W S+I+ +A++G
Sbjct: 472 HSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEP 531
Query: 417 HEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP-RAEHF- 474
EA+ L+++M EG+ ++VT S+L AC+ G E+ +I P RA+ F
Sbjct: 532 EEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKG----PIRADLFA 587
Query: 475 -SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
S ++D++ + G LE A+ + M K S W++I+ + YG
Sbjct: 588 ESALIDMYGKCGNLEWAHRVFESMPEKNEVS-WNSIIASYGAYG 630
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 184/368 (50%), Gaps = 2/368 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T +SLL D Q +H +I+ N ++ L + ++ Y K V A+ +
Sbjct: 347 DSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVY 406
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D +VV + MISGY NG + A+ +F +L G+R N +S L ACA M ++
Sbjct: 407 DSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMK 466
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ + K + +V+SAL+D+YAKCG ++ + +F +I KD V+WN+MI A
Sbjct: 467 LGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFA 526
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G +++ LFR M +G+K T+ S+L A + +IH ++IK + +
Sbjct: 527 QNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLF 586
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+LID+Y K G++ A++++ SM + + +S ++I+ + KE+ L + M +
Sbjct: 587 AESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGA-YGLVKESVSLLRHMQEE 645
Query: 329 KMGIDDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
D V +++ CA+ + G R +YQ + ++D+Y+++G++
Sbjct: 646 GFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDK 705
Query: 388 ANRAFDEM 395
A +M
Sbjct: 706 AMELIVDM 713
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 196/527 (37%), Positives = 292/527 (55%), Gaps = 2/527 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
++ +I +G L K I GDV A KAF + E +++ W A+I GY Q
Sbjct: 6 VYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNI 65
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ + ++ M S V N FT+ L+AC G+ I G K F N+FV+++
Sbjct: 66 VDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNS 125
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+ +YAK G I A I+F+++ + VVSW ++I G G ++ +F+ M + +KPD
Sbjct: 126 LVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPD 185
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
L S++ A +L + IH L+ KLGLE + SL +YAK G + A +
Sbjct: 186 WIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFN 245
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
M K ++I A+ISG+A ++ + +EA LF++MI K + +D + + + A V SL
Sbjct: 246 RMEKPNLILWNAMISGYA-NNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLE 304
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
L R + + K + D V LIDMYAK G I A FD + DK+V+ W+ +I GY
Sbjct: 305 LARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYG 364
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
HG+G EAI LY +MK G+ PND TF+ LL AC ++GL EGWELF ++ + I P
Sbjct: 365 LHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELF-HLMPDHGIEPHH 423
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
+H+SCVVDL R G L AY+ I M IKP S+W A+L AC I+ LGE+AA LF
Sbjct: 424 QHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFI 483
Query: 532 MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
++P + +YV LSN+Y +A W R +M ++ L K+ G+S ++
Sbjct: 484 LDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIE 530
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 183/385 (47%), Gaps = 6/385 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T++ +L+ C E IH G+ SN+ + ++ YAK G + AR FD++
Sbjct: 87 TFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKL 146
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
+R VVSWT++ISGY QNG AL VF M + V+ + S + A + L G+
Sbjct: 147 HDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGK 206
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I G + K + +L +YAK G +E A F R+E+ +++ WNAMI G A G
Sbjct: 207 SIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNG 266
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRAS--VGGIELMKISQIHDLIIKLGLESSNKL 269
+ +++ LFR M+ + ++ D T+ S + AS VG +EL + + I K +
Sbjct: 267 YGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELAR--WLDGYISKSEYRDDTFV 324
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
LID+YAK GSI A ++ + D++ + +I G+ H +EA L+ +M
Sbjct: 325 NTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGL-HGHGQEAICLYNEMKQAG 383
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ +D +L C N + G ++ + + ++D+ ++G + A
Sbjct: 384 VCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAY 443
Query: 390 RAFDEMGDKNVIS-WTSLIAGYAKH 413
M K +S W +L++ H
Sbjct: 444 DFIMSMPIKPGVSVWGALLSACKIH 468
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 167/458 (36%), Positives = 278/458 (60%), Gaps = 2/458 (0%)
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
S M G A Y +A+ AC R L GR + + R+ +F+ + L+ +Y +C
Sbjct: 31 SGMALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRC 90
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G ++DA + +R+ + VVSW MI G + + ++ LF M+R G P+ +TL ++L
Sbjct: 91 GALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVL 150
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
+ G + + Q+H L++K ES + SL+D+YAK +I+ A +++ ++ + D++
Sbjct: 151 TSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVV 210
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
SCTA+ISG+A+ +EA DLF+ + + M + V ++ + +ASL+ G+Q+HA
Sbjct: 211 SCTAIISGYAQK-GLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHAL 269
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
+ + + A+ N+LIDMY+K G++ + R FD M +++V+SW +++ GY +HG GHE
Sbjct: 270 ILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEV 329
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD 479
I L+K + H+ + P+ VT L++L CSH GL EG ++F ++ + L H+ C++D
Sbjct: 330 ISLFKDL-HKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIID 388
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVN 539
L R G+LE A N+I M + T S+W ++LGAC ++ N +GEL A+ L +MEPE + N
Sbjct: 389 LLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGN 448
Query: 540 YVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
YV+LSNIY AAG W + K RKLM E+++ K PG S++
Sbjct: 449 YVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWI 486
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 123/387 (31%), Positives = 210/387 (54%), Gaps = 4/387 (1%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y + + CI+++A + +HA +IT Y + L T+++ Y + G + AR DRMP
Sbjct: 45 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 104
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
ER+VVSWT MISGY+Q AL +F MLR+G N++T ++ L +C+ + + G+
Sbjct: 105 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 164
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF 212
+ + K F ++FV S+LLD+YAK I++A +F+ + +DVVS A+I G A +G
Sbjct: 165 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGL 224
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS 272
++++ LFR + +GM+ + T +++ A G L Q+H LI++ L L S
Sbjct: 225 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS 284
Query: 273 LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI 332
LID+Y+K G + + +++ +ML+ ++S A++ G+ R E LFKD+ K++
Sbjct: 285 LIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGR-HGLGHEVISLFKDL-HKEVKP 342
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAFKYQSS-YDAAVGNALIDMYAKSGEIADANRA 391
D V L +L+ C++ ++ G I K QS+ +ID+ +SG + A
Sbjct: 343 DSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNL 402
Query: 392 FDEMGDKNVIS-WTSLIAGYAKHGYGH 417
+ M ++ S W SL+ H H
Sbjct: 403 IENMPFESTPSIWGSLLGACRVHANVH 429
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 145/266 (54%), Gaps = 8/266 (3%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T ++L C ++ Q +H+ ++ +ES++ + + ++ YAK ++ AR+ FD +
Sbjct: 145 TLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTL 204
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
PER+VVS TA+ISGYAQ G DE AL +F + G++ N T+++ + A + + L G+
Sbjct: 205 PERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGK 264
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ I + + ++++L+D+Y+KCG + + +F+ + + VVSWNAM+ G G
Sbjct: 265 QVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHG 324
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT- 270
+ LF+ + ++ +KPD TL ++L G + + I D ++K E S L
Sbjct: 325 LGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVK---EQSALLHT 380
Query: 271 ---GSLIDVYAKYGSIRSAYQLYRSM 293
G +ID+ + G + A L +M
Sbjct: 381 GHYGCIIDLLGRSGRLEKALNLIENM 406
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 190/550 (34%), Positives = 291/550 (52%), Gaps = 1/550 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D +T SL+ C + +HA+ G+ SN + ++ YAK D+ +A F
Sbjct: 348 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 407
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
NVV W M+ Y N+ +F M + NQ+TY S L+ C R+ L+
Sbjct: 408 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 467
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G I I K F N +V S L+D+YAK G ++ AW + R KDVVSW MI G
Sbjct: 468 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 527
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
F+D + FR M+ +G++ D L + + A G L + QIH G S
Sbjct: 528 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 587
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+L+ +Y++ G I +Y + D I+ AL+SGF + N+ +EA +F M +
Sbjct: 588 FQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNN-EEALRVFVRMNRE 646
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ ++ + + A++ G+Q+HA K + V NALI MYAK G I+DA
Sbjct: 647 GIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDA 706
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ F E+ KN +SW ++I Y+KHG+G EA++ + +M H + PN VT + +L ACSH
Sbjct: 707 EKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHI 766
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
GL +G F M ++Y + P+ EH+ CVVD+ R G L A I++M IKP A +W
Sbjct: 767 GLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRT 826
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L AC ++ N +GE AA +L ++EPE S YV+LSN+Y + WD TR+ M+E+ +
Sbjct: 827 LLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGV 886
Query: 569 RKNPGYSFLQ 578
+K PG S+++
Sbjct: 887 KKEPGQSWIE 896
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 155/527 (29%), Positives = 272/527 (51%), Gaps = 19/527 (3%)
Query: 30 PSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFD 89
P + S+L C ++ +H ++ G+ S+ ++ ++ Y +G+++SA F
Sbjct: 248 PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFS 307
Query: 90 RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG 149
M +R+ V++ +I+G +Q GY E A+ +F M G+ + T +S + AC+ L
Sbjct: 308 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 367
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
G+ + K F N ++ ALL+LYAKC IE A F E ++VV WN M L
Sbjct: 368 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVM---LVA 424
Query: 210 QGFNDD---SFWLFRSMMRQGMKPDCFTLGSILRASV--GGIELMKISQIHDLIIKLGLE 264
G DD SF +FR M + + P+ +T SIL+ + G +EL + QIH IIK +
Sbjct: 425 YGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE--QIHSQIIKTNFQ 482
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ + LID+YAK G + +A+ + D++S T +I+G+ + N +A F+
Sbjct: 483 LNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQ-YNFDDKALTTFRQ 541
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M+ + + D+V L ++ CA + +L G+QIHA A S D NAL+ +Y++ G+
Sbjct: 542 MLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGK 601
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
I ++ AF++ + I+W +L++G+ + G EA+ ++ +M EG+ N+ TF S + A
Sbjct: 602 IEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKA 661
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
S T +G ++ +I K E + ++ ++A+ G + A +++ K S
Sbjct: 662 ASETANMKQGKQVHA-VITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVS 720
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSV--NYVVLSNIYTA 549
W+AI+ A S +G S A + FD +V N+V L + +A
Sbjct: 721 -WNAIINAYSKHGFGS----EALDSFDQMIHSNVRPNHVTLVGVLSA 762
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/469 (27%), Positives = 241/469 (51%), Gaps = 7/469 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IHA I+ G + + +I Y++ G V AR+ FD + ++ SW AMISG ++N
Sbjct: 169 IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNEC 228
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ A+ +F M G+ + +SS L AC ++ L+ G + G + K F + +V +A
Sbjct: 229 EAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA 288
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+ LY G + A +F + ++D V++N +I GL+ G+ + + LF+ M G++PD
Sbjct: 289 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 348
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
TL S++ A L + Q+H KLG S+NK+ G+L+++YAK I +A +
Sbjct: 349 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 408
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
+++ ++ + D+ + +F +F+ M ++++ + +L C + L
Sbjct: 409 ETEVENVVLWNVMLVAYGLLDD-LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 467
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
LG QIH+ K +A V + LIDMYAK G++ A K+V+SWT++IAGY
Sbjct: 468 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 527
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM-INKYRI-LP 469
++ + +A+ +++M G+ ++V + + AC+ EG ++ ++ + LP
Sbjct: 528 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 587
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
+ +V L++R G++E +Y Q + W+A++ GN
Sbjct: 588 FQ---NALVTLYSRCGKIEESYLAFEQTEAGDNIA-WNALVSGFQQSGN 632
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 137/490 (27%), Positives = 245/490 (50%), Gaps = 19/490 (3%)
Query: 36 LLQFCIDKKAE-RQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
LL+ C+ + +H+ I+ G +SN LS K+ FY GD+ A K FD MPER
Sbjct: 50 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPER 109
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM-- 152
+ +W MI A +F M+ V N+ T+S L AC +GG +
Sbjct: 110 TIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC------RGGSVAF 163
Query: 153 -----IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
I I ++ V + L+DLY++ G+++ A +F+ + KD SW AMI GL
Sbjct: 164 DVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGL 223
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI-SQIHDLIIKLGLESS 266
+ ++ LF M G+ P + S+L A IE ++I Q+H L++KLG S
Sbjct: 224 SKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSA-CKKIESLEIGEQLHGLVLKLGFSSD 282
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ +L+ +Y G++ SA ++ +M + D ++ LI+G ++ + ++A +LFK M
Sbjct: 283 TYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQ-CGYGEKAMELFKRMH 341
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
L + D L ++ C+ +L G+Q+HA+ K + + + AL+++YAK +I
Sbjct: 342 LDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIE 401
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A F E +NV+ W ++ Y + ++++M+ E +VPN T+ S+L C
Sbjct: 402 TALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCI 461
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
G G ++ + +I K A S ++D++A+ G+L++A++++ + K S W
Sbjct: 462 RLGDLELGEQIHSQII-KTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS-W 519
Query: 507 SAILGACSIY 516
+ ++ + Y
Sbjct: 520 TTMIAGYTQY 529
>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
Length = 749
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 191/581 (32%), Positives = 323/581 (55%), Gaps = 5/581 (0%)
Query: 2 NIVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
+++ A+ + G+ AL S+ T D S ++ C + +HAH + +
Sbjct: 105 SVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKS 164
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
S+L + ++ Y+K G V F+R+ +++++SW ++I+G+AQ G++ AL VF
Sbjct: 165 ERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVF 224
Query: 120 SAMLRSGVR-ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
M+ G N+F + SA RAC + + G I G K R +L+V +L D+YA+
Sbjct: 225 REMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYAR 284
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
C ++ A + F RIE D+VSWN+++ +++G ++ LF M G++PD T+ +
Sbjct: 285 CKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGL 344
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
L A VG L IH ++KLGL+ + SL+ +YA+ + SA ++ + D+
Sbjct: 345 LCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDV 404
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
++ ++++ A+ NH +E LF + + +D + L +L+ A + + +Q+HA
Sbjct: 405 VTWNSILTACAQH-NHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHA 463
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD-KNVISWTSLIAGYAKHGYGH 417
+AFK D + N LID YAK G + DA R F+ MG+ ++V SW+SLI GYA+ GY
Sbjct: 464 YAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAK 523
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
EA +L+ +M+ G+ PN VTF+ +L ACS G EG ++ M +Y I+P EH SC+
Sbjct: 524 EAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCI 583
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKS 537
VDL AR G+L A N I QM +P +W +L A ++ + +G+ AA + +++P S
Sbjct: 584 VDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHS 643
Query: 538 VNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
YV+L NIY A+G W+ + +K M ++K+PG S+++
Sbjct: 644 AAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVK 684
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 139/500 (27%), Positives = 251/500 (50%), Gaps = 41/500 (8%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYES-------NLHLSTKVIIFYAKVGDVLSAR 85
Y +L+ C ++ Q +H H++ + S N L +I Y
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYG--------- 97
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
RN VSW ++I+ + QNG +AL +FS+MLRSG A+QF SA+RAC +
Sbjct: 98 --------RNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 149
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
+ GR + K +L V++AL+ +Y+K G ++D ++LFERI+ KD++SW ++I
Sbjct: 150 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 209
Query: 206 GLAMQGFNDDSFWLFRSMMRQG-MKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLG 262
G A QGF ++ +FR M+ +G P+ F GS RA +VG E + QIH L IK
Sbjct: 210 GFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGE--QIHGLSIKYR 267
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
L+ + SL D+YA+ ++ SA + + D++S ++++ ++ + S EA LF
Sbjct: 268 LDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLS-EALVLF 326
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
+M + D + + +L C +L GR IH++ K D +V N+L+ MYA+
Sbjct: 327 SEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARC 386
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
+++ A F E+ D++V++W S++ A+H + E ++L+ + + ++ ++L
Sbjct: 387 SDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVL 446
Query: 443 FACSHTGL-----TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
A + G + +++ R+L + ++D +A+ G L+ A + M
Sbjct: 447 SASAELGYFEMVKQVHAYAFKAGLVDD-RMLS-----NTLIDTYAKCGSLDDAMRLFEIM 500
Query: 498 NIKPTASLWSAILGACSIYG 517
WS+++ + +G
Sbjct: 501 GNNRDVFSWSSLIVGYAQFG 520
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 190/550 (34%), Positives = 291/550 (52%), Gaps = 1/550 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D +T SL+ C + +HA+ G+ SN + ++ YAK D+ +A F
Sbjct: 388 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 447
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
NVV W M+ Y N+ +F M + NQ+TY S L+ C R+ L+
Sbjct: 448 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 507
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G I I K F N +V S L+D+YAK G ++ AW + R KDVVSW MI G
Sbjct: 508 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 567
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
F+D + FR M+ +G++ D L + + A G L + QIH G S
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 627
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+L+ +Y++ G I +Y + D I+ AL+SGF + N ++EA +F M +
Sbjct: 628 FQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGN-NEEALRVFVRMNRE 686
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ ++ + + A++ G+Q+HA K + V NALI MYAK G I+DA
Sbjct: 687 GIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDA 746
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ F E+ KN +SW ++I Y+KHG+G EA++ + +M H + PN VT + +L ACSH
Sbjct: 747 EKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHI 806
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
GL +G F M ++Y + P+ EH+ CVVD+ R G L A I++M IKP A +W
Sbjct: 807 GLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRT 866
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L AC ++ N +GE AA +L ++EPE S YV+LSN+Y + WD TR+ M+E+ +
Sbjct: 867 LLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGV 926
Query: 569 RKNPGYSFLQ 578
+K PG S+++
Sbjct: 927 KKEPGQSWIE 936
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 155/527 (29%), Positives = 272/527 (51%), Gaps = 19/527 (3%)
Query: 30 PSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFD 89
P + S+L C ++ +H ++ G+ S+ ++ ++ Y +G+++SA F
Sbjct: 288 PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFS 347
Query: 90 RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG 149
M +R+ V++ +I+G +Q GY E A+ +F M G+ + T +S + AC+ L
Sbjct: 348 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 407
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
G+ + K F N ++ ALL+LYAKC IE A F E ++VV WN M L
Sbjct: 408 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVM---LVA 464
Query: 210 QGFNDD---SFWLFRSMMRQGMKPDCFTLGSILRASV--GGIELMKISQIHDLIIKLGLE 264
G DD SF +FR M + + P+ +T SIL+ + G +EL + QIH IIK +
Sbjct: 465 YGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE--QIHSQIIKTNFQ 522
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ + LID+YAK G + +A+ + D++S T +I+G+ + N +A F+
Sbjct: 523 LNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQ-YNFDDKALTTFRQ 581
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M+ + + D+V L ++ CA + +L G+QIHA A S D NAL+ +Y++ G+
Sbjct: 582 MLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGK 641
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
I ++ AF++ + I+W +L++G+ + G EA+ ++ +M EG+ N+ TF S + A
Sbjct: 642 IEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKA 701
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
S T +G ++ +I K E + ++ ++A+ G + A +++ K S
Sbjct: 702 ASETANMKQGKQVHA-VITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVS 760
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSV--NYVVLSNIYTA 549
W+AI+ A S +G S A + FD +V N+V L + +A
Sbjct: 761 -WNAIINAYSKHGFGS----EALDSFDQMIHSNVRPNHVTLVGVLSA 802
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/469 (27%), Positives = 241/469 (51%), Gaps = 7/469 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IHA I+ G + + +I Y++ G V AR+ FD + ++ SW AMISG ++N
Sbjct: 209 IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNEC 268
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ A+ +F M G+ + +SS L AC ++ L+ G + G + K F + +V +A
Sbjct: 269 EAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA 328
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+ LY G + A +F + ++D V++N +I GL+ G+ + + LF+ M G++PD
Sbjct: 329 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 388
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
TL S++ A L + Q+H KLG S+NK+ G+L+++YAK I +A +
Sbjct: 389 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 448
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
+++ ++ + D+ + +F +F+ M ++++ + +L C + L
Sbjct: 449 ETEVENVVLWNVMLVAYGLLDD-LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 507
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
LG QIH+ K +A V + LIDMYAK G++ A K+V+SWT++IAGY
Sbjct: 508 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 567
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM-INKYRI-LP 469
++ + +A+ +++M G+ ++V + + AC+ EG ++ ++ + LP
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 627
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
+ +V L++R G++E +Y Q + W+A++ GN
Sbjct: 628 FQ---NALVTLYSRCGKIEESYLAFEQTEAGDNIA-WNALVSGFQQSGN 672
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 137/490 (27%), Positives = 245/490 (50%), Gaps = 19/490 (3%)
Query: 36 LLQFCIDKKAE-RQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
LL+ C+ + +H+ I+ G +SN LS K+ FY GD+ A K FD MPER
Sbjct: 90 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPER 149
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM-- 152
+ +W MI A +F M+ V N+ T+S L AC +GG +
Sbjct: 150 TIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC------RGGSVAF 203
Query: 153 -----IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
I I ++ V + L+DLY++ G+++ A +F+ + KD SW AMI GL
Sbjct: 204 DVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGL 263
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI-SQIHDLIIKLGLESS 266
+ ++ LF M G+ P + S+L A IE ++I Q+H L++KLG S
Sbjct: 264 SKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSA-CKKIESLEIGEQLHGLVLKLGFSSD 322
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ +L+ +Y G++ SA ++ +M + D ++ LI+G ++ + ++A +LFK M
Sbjct: 323 TYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQ-CGYGEKAMELFKRMH 381
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
L + D L ++ C+ +L G+Q+HA+ K + + + AL+++YAK +I
Sbjct: 382 LDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIE 441
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A F E +NV+ W ++ Y + ++++M+ E +VPN T+ S+L C
Sbjct: 442 TALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCI 501
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
G G ++ + +I K A S ++D++A+ G+L++A++++ + K S W
Sbjct: 502 RLGDLELGEQIHSQII-KTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS-W 559
Query: 507 SAILGACSIY 516
+ ++ + Y
Sbjct: 560 TTMIAGYTQY 569
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 186/548 (33%), Positives = 303/548 (55%), Gaps = 1/548 (0%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
STY S+ + C A R +H H + + S++ + T + YAK ++ A K F
Sbjct: 259 STYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSL 318
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+P+ N+ S+ AMI GYA+N A +F + ++ ++ + S AL A A ++ G
Sbjct: 319 LPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEG 378
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ G K N+ V +A+LD+Y KCG + +A LF+ +E +D VSWNA+I
Sbjct: 379 LQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQN 438
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
+ F +M+R M+PD FT GS+L+A G ++H IIK G+ +
Sbjct: 439 ESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVG 498
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
+L+D+Y+K G + A +++ + + ++S A+ISGF+ S+++ F M+ +
Sbjct: 499 SALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK-SEDSQRFFSHMLEMGV 557
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
D+ +L+ CAN+A++ LG+QIHA K + D + + L+DMY+K G + D+
Sbjct: 558 EPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLL 617
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
F + ++ ++W ++I G+A HG G EA+EL++ M HE + PN TF+S+L ACSH G
Sbjct: 618 MFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGN 677
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
+G F M + Y + P+ EH+SC+VD+ R GQ+E A +I+ M + A +W +L
Sbjct: 678 AKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLL 737
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
C I GN + E AA +L ++PE S Y +LSNIY AG W K R+ M +L+K
Sbjct: 738 SICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKK 797
Query: 571 NPGYSFLQ 578
PG S+++
Sbjct: 798 EPGCSWIE 805
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 142/563 (25%), Positives = 274/563 (48%), Gaps = 15/563 (2%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPD--TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
+++ + G +++++ L D + D +T L+ C + + IH +
Sbjct: 127 SLISGYLQNGDIQKSIAVFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQM 186
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G++ ++ + ++ YAK + + F +P++N +SW+A I+G QN L +F
Sbjct: 187 GFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLF 246
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
M R G+ +Q TY+S R+CA + + G + K F ++ V +A LD+YAKC
Sbjct: 247 KEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKC 306
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAM--QGFNDDSFWLFRSMMRQGMKPDCFTLGS 237
+ DA+ LF + ++ S+NAMI G A QGF +F LF + + D +L
Sbjct: 307 DNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQ--AFKLFLQLQKNSFSFDEVSLSG 364
Query: 238 ILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
L A+ + Q+H L IK L S+ + +++D+Y K G++ A L+ M D
Sbjct: 365 ALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRD 424
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
+S A+I+ ++++ K F M+ KM D+ +L CA + + G ++H
Sbjct: 425 PVSWNAIITACEQNESEGK-TLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVH 483
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
K VG+AL+DMY+K G + +A + + ++ ++SW ++I+G++
Sbjct: 484 GRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSE 543
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
++ + M G+ P++ T+ ++L C++ G ++ MI K +L S +
Sbjct: 544 DSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMI-KLELLSDVYITSTL 602
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKS 537
VD++++ G + + M R+ + + + W+A++ + +G LGE A LF+ ++
Sbjct: 603 VDMYSKCGNMHDSLLMFRKAPKRDSVT-WNAMICGFAYHG---LGE-EALELFEHMLHEN 657
Query: 538 V--NYVVLSNIYTAAGAWDNARK 558
+ N+ ++ A NA+K
Sbjct: 658 IKPNHATFVSVLRACSHVGNAKK 680
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 145/547 (26%), Positives = 260/547 (47%), Gaps = 39/547 (7%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ + Q C +++A + HAH+I +G+ + ++ +I Y K + A K F+ M
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85
Query: 92 PERN--------------------------------VVSWTAMISGYAQNGYDENALLVF 119
P+R+ VVSW ++ISGY QNG + ++ VF
Sbjct: 86 PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAK 178
M GV + T + +L+ C+ + G I G ++Q G F ++ SAL+D+YAK
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMG-FDYDVVTGSALVDMYAK 204
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
C +ED+ +F + K+ +SW+A I G LF+ M R+G+ T S+
Sbjct: 205 CNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASV 264
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
R+ G +Q+H +K S + + +D+YAK ++ AY+L+ + ++
Sbjct: 265 FRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNL 324
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
S A+I G+AR++ +AF LF + D+V L L+ A + + G Q+H
Sbjct: 325 QSYNAMIIGYARNE-QGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHG 383
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHE 418
A K S + V NA++DMY K G + +A+ FDEM ++ +SW ++I ++ +
Sbjct: 384 LAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGK 443
Query: 419 AIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVV 478
+ + M M P++ T+ S+L AC+ G E+ +I K + + S +V
Sbjct: 444 TLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRII-KSGMGLKMFVGSALV 502
Query: 479 DLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDM--EPEK 536
D++++ G +E A + ++ + S W+AI+ S+ + + ++ +M EP+
Sbjct: 503 DMYSKCGMMEEAEKIHYRLEEQTMVS-WNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDN 561
Query: 537 SVNYVVL 543
VL
Sbjct: 562 FTYATVL 568
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 151/286 (52%), Gaps = 14/286 (4%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY S+L+ C ++A +H II +G + + + ++ Y+K G + A K
Sbjct: 459 DEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIH 518
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
R+ E+ +VSW A+ISG++ E++ FS ML GV + FTY++ L CA + +
Sbjct: 519 YRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVG 578
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ I + K + ++++ S L+D+Y+KCG + D+ ++F + ++D V+WNAMI G A
Sbjct: 579 LGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFA 638
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS--VGGIE-----LMKISQIHDLIIKL 261
G +++ LF M+ + +KP+ T S+LRA VG + K++ I+
Sbjct: 639 YHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIY------ 692
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALIS 306
LE + ++D+ + G + A +L + M + D I L+S
Sbjct: 693 ALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLS 738
>gi|297606175|ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group]
gi|255677226|dbj|BAF19983.2| Os06g0613100 [Oryza sativa Japonica Group]
Length = 590
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 166/456 (36%), Positives = 277/456 (60%), Gaps = 2/456 (0%)
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
M G A Y +A+ AC R L GR + + R+ +F+ + L+ +Y +CG
Sbjct: 1 MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 60
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
++DA + +R+ + VVSW MI G + + ++ LF M+R G P+ +TL ++L +
Sbjct: 61 LDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTS 120
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC 301
G + + Q+H L++K ES + SL+D+YAK +I+ A +++ ++ + D++SC
Sbjct: 121 CSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSC 180
Query: 302 TALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF 361
TA+ISG+A+ +EA DLF+ + + M + V ++ + +ASL+ G+Q+HA
Sbjct: 181 TAIISGYAQK-GLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALIL 239
Query: 362 KYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIE 421
+ + + A+ N+LIDMY+K G++ + R FD M +++V+SW +++ GY +HG GHE I
Sbjct: 240 RKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVIS 299
Query: 422 LYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLF 481
L+K + H+ + P+ VT L++L CSH GL EG ++F ++ + L H+ C++DL
Sbjct: 300 LFKDL-HKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLL 358
Query: 482 ARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYV 541
R G+LE A N+I M + T S+W ++LGAC ++ N +GEL A+ L +MEPE + NYV
Sbjct: 359 GRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYV 418
Query: 542 VLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
+LSNIY AAG W + K RKLM E+++ K PG S++
Sbjct: 419 ILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWI 454
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 123/387 (31%), Positives = 210/387 (54%), Gaps = 4/387 (1%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y + + CI+++A + +HA +IT Y + L T+++ Y + G + AR DRMP
Sbjct: 13 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
ER+VVSWT MISGY+Q AL +F MLR+G N++T ++ L +C+ + + G+
Sbjct: 73 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 132
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF 212
+ + K F ++FV S+LLD+YAK I++A +F+ + +DVVS A+I G A +G
Sbjct: 133 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGL 192
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS 272
++++ LFR + +GM+ + T +++ A G L Q+H LI++ L L S
Sbjct: 193 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS 252
Query: 273 LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI 332
LID+Y+K G + + +++ +ML+ ++S A++ G+ R E LFKD+ K++
Sbjct: 253 LIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGR-HGLGHEVISLFKDL-HKEVKP 310
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAFKYQSS-YDAAVGNALIDMYAKSGEIADANRA 391
D V L +L+ C++ ++ G I K QS+ +ID+ +SG + A
Sbjct: 311 DSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNL 370
Query: 392 FDEMGDKNVIS-WTSLIAGYAKHGYGH 417
+ M ++ S W SL+ H H
Sbjct: 371 IENMPFESTPSIWGSLLGACRVHANVH 397
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 145/266 (54%), Gaps = 8/266 (3%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T ++L C ++ Q +H+ ++ +ES++ + + ++ YAK ++ AR+ FD +
Sbjct: 113 TLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTL 172
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
PER+VVS TA+ISGYAQ G DE AL +F + G++ N T+++ + A + + L G+
Sbjct: 173 PERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGK 232
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ I + + ++++L+D+Y+KCG + + +F+ + + VVSWNAM+ G G
Sbjct: 233 QVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHG 292
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT- 270
+ LF+ + ++ +KPD TL ++L G + + I D ++K E S L
Sbjct: 293 LGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVK---EQSALLHT 348
Query: 271 ---GSLIDVYAKYGSIRSAYQLYRSM 293
G +ID+ + G + A L +M
Sbjct: 349 GHYGCIIDLLGRSGRLEKALNLIENM 374
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 196/527 (37%), Positives = 292/527 (55%), Gaps = 2/527 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
++ +I +G L K I GDV A KAF + E +++ W A+I GY Q
Sbjct: 21 VYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNI 80
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ + ++ M S V N FT+ L+AC G+ I G K F N+FV+++
Sbjct: 81 VDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNS 140
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+ +YAK G I A I+F+++ + VVSW ++I G G ++ +F+ M + +KPD
Sbjct: 141 LVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPD 200
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
L S++ A +L + IH L+ KLGLE + SL +YAK G + A +
Sbjct: 201 WIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFN 260
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
M K ++I A+ISG+A ++ + +EA LF++MI K + +D + + + A V SL
Sbjct: 261 RMEKPNLILWNAMISGYA-NNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLE 319
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
L R + + K + D V LIDMYAK G I A FD + DK+V+ W+ +I GY
Sbjct: 320 LARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYG 379
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
HG+G EAI LY +MK G+ PND TF+ LL AC ++GL EGWELF ++ + I P
Sbjct: 380 LHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELF-HLMPDHGIEPHH 438
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
+H+SCVVDL R G L AY+ I M IKP S+W A+L AC I+ LGE+AA LF
Sbjct: 439 QHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFI 498
Query: 532 MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
++P + +YV LSN+Y +A W R +M ++ L K+ G+S ++
Sbjct: 499 LDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIE 545
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 183/385 (47%), Gaps = 6/385 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T++ +L+ C E IH G+ SN+ + ++ YAK G + AR FD++
Sbjct: 102 TFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKL 161
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
+R VVSWT++ISGY QNG AL VF M + V+ + S + A + L G+
Sbjct: 162 HDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGK 221
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I G + K + +L +YAK G +E A F R+E+ +++ WNAMI G A G
Sbjct: 222 SIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNG 281
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRAS--VGGIELMKISQIHDLIIKLGLESSNKL 269
+ +++ LFR M+ + ++ D T+ S + AS VG +EL + + I K +
Sbjct: 282 YGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELAR--WLDGYISKSEYRDDTFV 339
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
LID+YAK GSI A ++ + D++ + +I G+ H +EA L+ +M
Sbjct: 340 NTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGL-HGHGQEAICLYNEMKQAG 398
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ +D +L C N + G ++ + + ++D+ ++G + A
Sbjct: 399 VCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAY 458
Query: 390 RAFDEMGDKNVIS-WTSLIAGYAKH 413
M K +S W +L++ H
Sbjct: 459 DFIMSMPIKPGVSVWGALLSACKIH 483
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 183/551 (33%), Positives = 309/551 (56%), Gaps = 2/551 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ + LQ C D + IHA I+ +G +++++ ++ Y + G + A F +
Sbjct: 162 TFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNL 221
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
+++V+W +M++G+ QNG AL F + + ++ +Q + S + A R+ +L G+
Sbjct: 222 EGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGK 281
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I K F N+ V + L+D+YAKC + F+ + KD++SW G A
Sbjct: 282 EIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNK 341
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
+ L R + +GM D +GSIL A G L KI +IH I+ GL S L
Sbjct: 342 CYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGL-SDPVLQN 400
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
++IDVY + G I A +++ S+ D++S T++IS + + +K A ++F M +
Sbjct: 401 TIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANK-ALEVFSSMKETGLE 459
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
D V L +L+ ++++L G++IH F + + ++ N L+DMYA+ G + DA +
Sbjct: 460 PDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKI 519
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLT 451
F ++N+I WT++I+ Y HGYG A+EL+ +MK E ++P+ +TFL+LL+ACSH+GL
Sbjct: 520 FTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLV 579
Query: 452 CEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
EG M +Y++ P EH++C+VDL RR LE AY +++ M +PT +W A+LG
Sbjct: 580 NEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLG 639
Query: 512 ACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKN 571
AC I+ N +GE+AA L +++ + NYV++SN++ A G W + + R M+ L KN
Sbjct: 640 ACRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKN 699
Query: 572 PGYSFLQSSKK 582
PG S+++ K
Sbjct: 700 PGCSWIEVGNK 710
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 165/513 (32%), Positives = 277/513 (53%), Gaps = 10/513 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
D T+ LL+ C + IH I G +S + + ++ YAK D+ ARK
Sbjct: 56 FDSYTFPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKL 115
Query: 88 FDRMPERN-VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FDRM RN VVSW ++IS Y+ NG AL +FS ML++GV N +T+++AL+AC +
Sbjct: 116 FDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSF 175
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
++ G I +I K V +++V +AL+ +Y + G + +A ++F +E KD+V+WN+M+ G
Sbjct: 176 IKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTG 235
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
G ++ F + +KPD ++ SI+ AS L+ +IH IK G +S+
Sbjct: 236 FIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSN 295
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ +LID+YAK + + + M D+IS T +G+A++ + +A +L + +
Sbjct: 296 ILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCY-LQALELLRQLQ 354
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
++ M +D ++ +L C + L ++IH + + S D + N +ID+Y + G I
Sbjct: 355 MEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLS-DPVLQNTIIDVYGECGIID 413
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA-C 445
A R F+ + K+V+SWTS+I+ Y +G ++A+E++ MK G+ P+ VT +S+L A C
Sbjct: 414 YAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVC 473
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
S + L +G E+ +I K IL + +VD++AR G +E AY I L
Sbjct: 474 SLSTLK-KGKEIHGFIIRKGFIL-EGSISNTLVDMYARCGSVEDAYK-IFTCTKNRNLIL 530
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSV 538
W+A++ A YG GE A M+ EK +
Sbjct: 531 WTAMISA---YGMHGYGEAAVELFMRMKDEKII 560
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 148/495 (29%), Positives = 255/495 (51%), Gaps = 19/495 (3%)
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
Y K G VL A FD+M ER++ +W AM+ GY NG AL ++ M GV + +T+
Sbjct: 2 YGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTF 61
Query: 135 SSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE- 193
L+AC + L G I G K +FV ++L+ LYAKC I A LF+R+
Sbjct: 62 PVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYV 121
Query: 194 RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ 253
R DVVSWN++I + G ++ LF M++ G+ + +T + L+A + Q
Sbjct: 122 RNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQ 181
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN 313
IH I+K G + +L+ +Y ++G + A ++ ++ DI++ ++++GF ++
Sbjct: 182 IHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGL 241
Query: 314 HSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN 373
+S EA + F D+ + D V + ++ + L G++IHA+A K + VGN
Sbjct: 242 YS-EALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGN 300
Query: 374 ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP 433
LIDMYAK ++ RAFD M K++ISWT+ AGYA++ +A+EL ++++ EGM
Sbjct: 301 TLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDV 360
Query: 434 NDVTFLSLLFACSHTGLTCEGWELFTDMINKYRI---LPRAEHFSCVVDLFARRGQLESA 490
+ S+L AC GL C G I+ Y I L + ++D++ G ++ A
Sbjct: 361 DATMIGSILLACR--GLNCLGK---IKEIHGYTIRGGLSDPVLQNTIIDVYGECGIIDYA 415
Query: 491 YNMIRQMNIKPTASLWSAILGACSIY---GNTSLGELAARNLFDMEPEKSVNYVVLSNIY 547
+ + K S W++++ +C ++ N +L ++ +EP+ YV L +I
Sbjct: 416 VRIFESIECKDVVS-WTSMI-SCYVHNGLANKALEVFSSMKETGLEPD----YVTLVSIL 469
Query: 548 TAAGAWDNARKTRKL 562
+A + +K +++
Sbjct: 470 SAVCSLSTLKKGKEI 484
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 151/284 (53%), Gaps = 2/284 (0%)
Query: 175 LYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFT 234
+Y KCG + DA ++F+++ + + +WNAM+GG G + ++R M G+ D +T
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 235 LGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM- 293
+L+A +L ++IH L IK G +S + SL+ +YAK I A +L+ M
Sbjct: 61 FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120
Query: 294 LKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG 353
++ D++S ++IS ++ + EA LF +M+ + + L C + + + LG
Sbjct: 121 VRNDVVSWNSIISAYS-GNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLG 179
Query: 354 RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKH 413
QIHA K D V NAL+ MY + G++ +A F + K++++W S++ G+ ++
Sbjct: 180 MQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQN 239
Query: 414 GYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWEL 457
G EA+E + +++ + P+ V+ +S++ A G G E+
Sbjct: 240 GLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEI 283
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 10/211 (4%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITN 59
+++ G +AL+ S +T L+P T +S+L ++ IH II
Sbjct: 432 SMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRK 491
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G+ +S ++ YA+ G V A K F RN++ WTAMIS Y +GY E A+ +F
Sbjct: 492 GFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELF 551
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGR----MIQGSIQKGRFVENLFVKSALLDL 175
M + + T+ + L AC+ + G+ +++ Q + E+ + L+DL
Sbjct: 552 MRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHY---TCLVDL 608
Query: 176 YAKCGWIEDAWILFERIERKDVVS-WNAMIG 205
+ +E+A+ + + ++ + W A++G
Sbjct: 609 LGRRNCLEEAYQIVKSMQNEPTPEVWCALLG 639
>gi|413952893|gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]
Length = 716
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 186/563 (33%), Positives = 306/563 (54%), Gaps = 3/563 (0%)
Query: 13 LKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVI 72
L ++ CP+ D ++L + CI +H I G +++ ++
Sbjct: 150 LHHDMRRRRPCPEAQDDFVLSLAL-KACIRSAEYSYGRSLHCDAIKVGGADGFVMNS-LV 207
Query: 73 IFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQF 132
YAK D+ ARK F+R+P+RNVVSWT+MISG QNG+ + LL+F+ M + V +++
Sbjct: 208 DMYAKAEDLECARKVFERIPDRNVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEY 267
Query: 133 TYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI 192
T ++ + AC+ + L GR + GS+ K + N F+ +ALLD+Y KCG ++ A +F+ +
Sbjct: 268 TIATVITACSALFGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDHARCVFDEL 327
Query: 193 ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS 252
D+V W MI G G D+ LF + P+ T ++L AS +L
Sbjct: 328 SYIDLVLWTTMIVGYTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGK 387
Query: 253 QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDD 312
IH L +KLGL N + +L+D+YAK ++ A +++ + D+++ ++ISG+A ++
Sbjct: 388 SIHGLAVKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISGYA-EN 446
Query: 313 NHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG 372
N +A LFK M L+ D + + L+ + L +G+ IH +A K+ + V
Sbjct: 447 NMGDDALMLFKQMSLQGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVSNIYVD 506
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
AL+++Y K G++ A R FDEM D+N ++W ++I GY G +I L+ +M +G+
Sbjct: 507 TALLNLYNKCGDLLSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLKDGVY 566
Query: 433 PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYN 492
PND+ F S+L CSH+G+ G F M + I P +H++C+VD+ AR G LE A
Sbjct: 567 PNDIAFTSILSTCSHSGMVTAGKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEDALE 626
Query: 493 MIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGA 552
I M ++ S+W A L C ++ E A + + + PE+ YV++SN+YT+ G
Sbjct: 627 FIDNMPMQADTSVWGAFLHGCELHSRLQFAEEAIKRMMVLHPERPDLYVLISNLYTSNGM 686
Query: 553 WDNARKTRKLMEERSLRKNPGYS 575
WD + R+ M+E+ L K PG S
Sbjct: 687 WDKSLAIRRWMQEKGLVKLPGCS 709
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 140/480 (29%), Positives = 248/480 (51%), Gaps = 18/480 (3%)
Query: 51 LIHAHIITNGYE---SNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYA 107
++HA ++T+ +L TK++ YA +GD+ SAR FD P + S+ AM+
Sbjct: 80 VLHARLLTHPQGLLLGSLRARTKLLSCYAALGDLASARMVFDGTPRPDAYSYGAMLWCLV 139
Query: 108 QNGYDENALLVFSAMLR---SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVE 164
Q +A+ + M R + F S AL+AC R GR + K +
Sbjct: 140 QTERHADAVALHHDMRRRRPCPEAQDDFVLSLALKACIRSAEYSYGRSLHCDAIKVGGAD 199
Query: 165 NLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMM 224
FV ++L+D+YAK +E A +FERI ++VVSW +MI G GF D LF M
Sbjct: 200 G-FVMNSLVDMYAKAEDLECARKVFERIPDRNVVSWTSMISGCVQNGFASDGLLLFNKMR 258
Query: 225 RQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIR 284
+ + P +T+ +++ A L + +H +IK GL S++ ++ +L+D+Y K G +
Sbjct: 259 QDNVPPSEYTIATVITACSALFGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELD 318
Query: 285 SAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNIC 344
A ++ + D++ T +I G+ ++ N +A LF D + + V +L+
Sbjct: 319 HARCVFDELSYIDLVLWTTMIVGYTQNGN-PLDALRLFLDKRFANIAPNSVTTATVLSAS 377
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWT 404
A + L+LG+ IH A K VGNAL+DMYAK +++A+R F + +K+V++W
Sbjct: 378 AQLRDLSLGKSIHGLAVKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWN 437
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK 464
S+I+GYA++ G +A+ L+K+M +G P+ ++ ++ L A C G L I+
Sbjct: 438 SMISGYAENNMGDDALMLFKQMSLQGSSPDAISVVNALSAS-----VCLGDLLIGKSIHG 492
Query: 465 YRI----LPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTS 520
Y + + + +++L+ + G L SA + +MN + + + W A++G + G+++
Sbjct: 493 YAVKHAFVSNIYVDTALLNLYNKCGDLLSARRVFDEMNDRNSVT-WCAMIGGYGMQGDSA 551
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 187/528 (35%), Positives = 300/528 (56%), Gaps = 1/528 (0%)
Query: 51 LIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
L HA I ++ + + ++ Y K G ARK FD MPERN VSW MISGYA
Sbjct: 129 LAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQK 188
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
AL +F M R N+F ++S L A + G+ I K + + V +
Sbjct: 189 LAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGN 248
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
AL+ +YAKCG ++DA FE K+ ++W+AMI G A G +D + LF SM G++P
Sbjct: 249 ALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRP 308
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
FT ++ A + Q+HD ++KLG ES + +L+D+YAK SI A + +
Sbjct: 309 SEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGF 368
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
+ + DI+ T++I G+ ++ +++A L+ M ++ + +++ + +L C+++A+L
Sbjct: 369 DYLQEPDIVLWTSMIGGYVQN-GENEDALSLYGRMEMEGILPNELTMASVLKACSSLAAL 427
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
G+QIHA KY + +G+AL MYAK G + D F M ++VISW ++I+G
Sbjct: 428 EQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGL 487
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
+++G G EA+EL+++M+ EG P+ VTF+++L ACSH GL GW F M +++ + PR
Sbjct: 488 SQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPR 547
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
EH++C+VD+ +R G+L+ A I LW ILGAC Y N LG A L
Sbjct: 548 VEHYACMVDILSRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLM 607
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
++ ++S YV+LS+IY+A G W++ + R++M+ R + K PG S+++
Sbjct: 608 ELGSQESSAYVLLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIE 655
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 148/522 (28%), Positives = 268/522 (51%), Gaps = 11/522 (2%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
S + +LLQ+ ++ ++ +HA II + S ++++ ++ YAK + A+ F+R
Sbjct: 8 SFFTALLQYTHNRSLQK-GKALHAQIIKSS-SSCVYIANSLVNLYAKCQRLREAKFVFER 65
Query: 91 MPERNVVSWTAMISGYAQNGYD--ENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ ++VVSW +I+GY+Q+G + + +F M N T++ A + +
Sbjct: 66 IQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAA 125
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
GGR+ K ++FV S+L+++Y K G +A +F+ + ++ VSW MI G A
Sbjct: 126 GGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYA 185
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
Q ++ LFR M R+ + F S+L A + QIH + +K GL S
Sbjct: 186 SQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVS 245
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +L+ +YAK GS+ A Q + + + I+ +A+I+G+A+ + S +A LF M L
Sbjct: 246 VGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGD-SDKALKLFSSMHLS 304
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ + ++N C+++ + G+Q+H + K V AL+DMYAK I DA
Sbjct: 305 GIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDA 364
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ FD + + +++ WTS+I GY ++G +A+ LY +M+ EG++PN++T S+L ACS
Sbjct: 365 RKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSL 424
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
+G ++ + KY S + ++A+ G L+ + R+M + S W+A
Sbjct: 425 AALEQGKQIHARTV-KYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVIS-WNA 482
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKS-VNYVVLSNIYTA 549
++ S G G+ A +M+ E + +YV NI +A
Sbjct: 483 MISGLSQNG---CGKEALELFEEMQLEGTKPDYVTFVNILSA 521
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 158/287 (55%), Gaps = 3/287 (1%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
++G +ALK S + + PS T++ ++ C D A + +H +++ G+ES ++
Sbjct: 287 QSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIY 346
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ T ++ YAK ++ ARK FD + E ++V WT+MI GY QNG +E+AL ++ M G
Sbjct: 347 VMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEG 406
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
+ N+ T +S L+AC+ + L+ G+ I K F + + SAL +YAKCG ++D
Sbjct: 407 ILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGT 466
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGG 245
++F R+ +DV+SWNAMI GL+ G ++ LF M +G KPD T +IL A S G
Sbjct: 467 LVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMG 526
Query: 246 IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRS 292
+ + + G++ + ++D+ ++ G ++ A + S
Sbjct: 527 LVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFTES 573
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 150/313 (47%), Gaps = 6/313 (1%)
Query: 248 LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG 307
L K +H IIK S + SL+++YAK +R A ++ + D++S +I+G
Sbjct: 22 LQKGKALHAQIIKSS-SSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIING 80
Query: 308 FARD-DNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
+++ + S +LF+ M + + + + + GR HA A K S
Sbjct: 81 YSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSC 140
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
D VG++L++MY K+G +A + FD M ++N +SW ++I+GYA EA+ L++ M
Sbjct: 141 RDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLM 200
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
+ E N+ F S+L A + L G ++ + K +L + +V ++A+ G
Sbjct: 201 RREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAV-KNGLLSIVSVGNALVTMYAKCGS 259
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNT--SLGELAARNLFDMEPEKSVNYVVLS 544
L+ A + K + + WSA++ + G++ +L ++ +L + P + V++
Sbjct: 260 LDDALQTFETSSDKNSIT-WSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVIN 318
Query: 545 NIYTAAGAWDNAR 557
AW+ +
Sbjct: 319 ACSDLGAAWEGKQ 331
>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 708
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 189/555 (34%), Positives = 316/555 (56%), Gaps = 9/555 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D + L+ C + + IH I+ N+ L T ++ YAK G++ S+ K F
Sbjct: 153 DDIVFSKALKACTEVQDLDNGKKIHCQIVKVPSFDNVVL-TGLLDMYAKCGEIKSSYKVF 211
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ + RNVV WT+MI+GY +N E L++F+ M + V N++TY + + AC ++R L
Sbjct: 212 EDITLRNVVCWTSMIAGYVKNDLYEEGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALH 271
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ G + K + + ++LLD+Y KCG I +A +F D+V W AMI G
Sbjct: 272 QGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYT 331
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS--VGGIELMKISQIHDLIIKLGLESS 266
G +++ LF+ M G+KP+C T+ S+L VG +EL + IH L IK+G+ +
Sbjct: 332 HNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGR--SIHGLSIKVGIWDT 389
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
N + +L+ +YAK R A ++ + DI++ ++ISGF+++ + EA LF M
Sbjct: 390 N-VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGS-IHEALFLFHRMN 447
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK--YQSSYDAAVGNALIDMYAKSGE 384
+ + + V + + + CA++ SL +G +HA++ K + +S VG AL+D YAK G+
Sbjct: 448 TESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGD 507
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
A FD + +KN I+W+++I GY K G ++EL+++M + PN+ TF S+L A
Sbjct: 508 AESARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSVLSA 567
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
CSHTG+ EG + F+ M Y P +H++C+VD+ AR G+LE A ++I +M I+P
Sbjct: 568 CSHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVR 627
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
+ A L C ++ LGE+ + + D+ P+ + YV++SN+Y + G W A++ R LM+
Sbjct: 628 CFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWSQAKEVRNLMK 687
Query: 565 ERSLRKNPGYSFLQS 579
+R L K G+S ++S
Sbjct: 688 QRGLSKIAGHSIMES 702
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 157/556 (28%), Positives = 280/556 (50%), Gaps = 18/556 (3%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
LL C + + RQAH + + NG ++ ++TK++ Y G AR FD++PE +
Sbjct: 62 LLSKCTNIDSLRQAHGV---LTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPEPD 118
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG 155
W ++ Y N + + +++ G + +S AL+AC ++ L G+ I
Sbjct: 119 FYLWKVILRCYCLNNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHC 178
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD 215
I K +N+ V + LLD+YAKCG I+ ++ +FE I ++VV W +MI G ++
Sbjct: 179 QIVKVPSFDNV-VLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEE 237
Query: 216 SFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLID 275
LF M + + +T G+++ A L + H +IK G+E S+ L SL+D
Sbjct: 238 GLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLD 297
Query: 276 VYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDV 335
+Y K G I +A +++ D++ TA+I G+ + + EA LF+ M + + V
Sbjct: 298 MYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGS-VNEALSLFQKMSGVGIKPNCV 356
Query: 336 ILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEM 395
+ +L+ C V +L LGR IH + K +D V NAL+ MYAK + DA F+
Sbjct: 357 TIASVLSGCGLVGNLELGRSIHGLSIKV-GIWDTNVANALVHMYAKCYQNRDAKYVFEME 415
Query: 396 GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGW 455
+K++++W S+I+G++++G HEA+ L+ +M E ++PN VT SL AC+ G G
Sbjct: 416 SEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGS 475
Query: 456 ELFTDMINKYRILPRAEHF-SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACS 514
L + + + H + ++D +A+ G ESA + + K T + WSA++G
Sbjct: 476 SLHAYSVKLGFLASSSVHVGTALLDFYAKCGDAESARLIFDTIEEKNTIT-WSAMIGGYG 534
Query: 515 IYGNTSLGELAARNLFD--MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNP 572
G+T + LF+ ++ ++ N +++ +A + +K S+ K+
Sbjct: 535 KQGDTK----GSLELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEGKKYFS--SMYKD- 587
Query: 573 GYSFLQSSKKNILLLE 588
Y+F S+K +++
Sbjct: 588 -YNFTPSTKHYTCMVD 602
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 217/639 (33%), Positives = 338/639 (52%), Gaps = 66/639 (10%)
Query: 3 IVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
++R + K G L L F + L D T+ +L+ C + + R +HA + NG
Sbjct: 98 LIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANG 157
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER---NVVSWTAMISGYAQNGYDENALL 117
SN+ + ++ Y + G + A + FD + ER ++VSW ++++ Y Q G AL
Sbjct: 158 LGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALR 217
Query: 118 VFSAMLRSG------VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ R G +R + T + L ACA + LQ G+ + G + V+++FV +A
Sbjct: 218 I---AFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNA 274
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAM---------------------------- 203
L+ +YAKC + +A +FE I++KDVVSWNAM
Sbjct: 275 LVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLD 334
Query: 204 -------IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQI 254
I G A +G ++ +FR M G++P+ TL S+L ASVG L+ Q
Sbjct: 335 VITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGA--LLYGKQT 392
Query: 255 HDLIIK--LGLESSNK-----LTGSLIDVYAKYGSIRSAYQLYRSMLKTD--IISCTALI 305
H +IK L L ++K + LID+YAK S R A ++ S+ D +++ T +I
Sbjct: 393 HAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMI 452
Query: 306 SGFARDDNHSKEAFDLFKDMILKKMGI--DDVILCLMLNICANVASLNLGRQIHAFAFKY 363
G+A+ + +A LF + +K + + L L CA + L LGRQ+HA+A +
Sbjct: 453 GGYAQH-GEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRN 511
Query: 364 QSSYDAA-VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIEL 422
++ + VGN LIDMY+KSG+I A FD M +NV+SWTSL+ GY HG G EA+ L
Sbjct: 512 ENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHL 571
Query: 423 YKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFA 482
+ +M+ G + +TFL +L+ACSH+G+ +G F DM+ + I P AEH++C+VDL
Sbjct: 572 FDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLG 631
Query: 483 RRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVV 542
R G+L A +I+ M+++PTA +W A+L A I+ N LGE AA L ++ E +Y +
Sbjct: 632 RAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGSYTL 691
Query: 543 LSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSK 581
LSN+Y A W + + R LM+ +RK PG S++Q K
Sbjct: 692 LSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKK 730
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 157/573 (27%), Positives = 264/573 (46%), Gaps = 83/573 (14%)
Query: 19 FSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKV 78
F+ S P L +SLL+ C K A L H I +G+ + + + Y +
Sbjct: 24 FTTSPPTIPL-----ISLLRQC---KTLINAKLAHQQIFVHGFTE---MFSYAVGAYIEC 72
Query: 79 GDVLSARKAFDRM-PERNVVSW-TAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSS 136
G A R+ P + V W A+I + G ++ L + M R G + +T+
Sbjct: 73 GASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPF 132
Query: 137 ALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI-ERK 195
L+AC + L+ G + + N+F+ ++++ +Y +CG ++DA +F+ + ERK
Sbjct: 133 VLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERK 192
Query: 196 --DVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG------MKPDCFTLGSILRASVGGIE 247
D+VSWN+++ G S R R G ++PD TL +IL A
Sbjct: 193 IEDIVSWNSILAAYVQGG---QSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFA 249
Query: 248 LMKISQIHDLIIKLGLESSNKLTGSLIDVYAK---------------------------- 279
L Q+H ++ GL + +L+ +YAK
Sbjct: 250 LQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTG 309
Query: 280 ---YGSIRSAYQLYRSM----LKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI 332
GS SA L++ M +K D+I+ +A+I+G+A+ H EA D+F+ M L +
Sbjct: 310 YSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQ-KGHGFEALDVFRQMQLYGLEP 368
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAFK-------YQSSYDAAVGNALIDMYAKSGEI 385
+ V L +L+ CA+V +L G+Q HA+ K D V N LIDMYAK
Sbjct: 369 NVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSY 428
Query: 386 ADANRAFD--EMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM--KHEGMVPNDVTFLSL 441
A FD E DKNV++WT +I GYA+HG ++A++L+ ++ + + PN T
Sbjct: 429 RVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCA 488
Query: 442 LFACSHTGLTCEGWELFTDMI---NKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMN 498
L AC+ G G +L + N+ +L +C++D++++ G +++A + M
Sbjct: 489 LMACARLGELRLGRQLHAYALRNENESEVLYVG---NCLIDMYSKSGDIDAARAVFDNMK 545
Query: 499 IKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
++ S W++++ YG GE A +LFD
Sbjct: 546 LRNVVS-WTSLMTG---YGMHGRGE-EALHLFD 573
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 210/482 (43%), Gaps = 90/482 (18%)
Query: 176 YAKCGWIEDAWILFERI--ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCF 233
Y +CG +A L +R+ V WNA+I G DD+ + M R G PD +
Sbjct: 69 YIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHY 128
Query: 234 TLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
T +L+A L + +H ++ GL S+ + S++ +Y + G++ A+Q++ +
Sbjct: 129 TFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEV 188
Query: 294 LK---TDIISCTALISGFARDDNHS---KEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
L+ DI+S ++++ + + + AF + L K+ D + L +L CA+V
Sbjct: 189 LERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSL-KLRPDAITLVNILPACASV 247
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVIS----- 402
+L G+Q+H F+ + D VGNAL+ MYAK ++ +AN+ F+ + K+V+S
Sbjct: 248 FALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMV 307
Query: 403 ------------------------------WTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
W+++IAGYA+ G+G EA++++++M+ G+
Sbjct: 308 TGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLE 367
Query: 433 PNDVTFLSLLFACSHTGLTCEGWEL-------------------------FTDMINK--- 464
PN VT SLL C+ G G + DM K
Sbjct: 368 PNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKS 427
Query: 465 YRIL-----------PRAEHFSCVVDLFARRGQLESAYNMIRQM-----NIKPTASLWSA 508
YR+ ++ ++ +A+ G+ A + Q+ ++KP A S
Sbjct: 428 YRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSC 487
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYV--VLSNIYTAAGAWDNARKTRKLMEER 566
L AC+ G LG E E V YV L ++Y+ +G D AR M+ R
Sbjct: 488 ALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLR 547
Query: 567 SL 568
++
Sbjct: 548 NV 549
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 198/612 (32%), Positives = 329/612 (53%), Gaps = 69/612 (11%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y +LL+ C + +A +H+HII L +I YAK+G + A K FD+MP
Sbjct: 12 YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71
Query: 93 ERNV-------------------------------VSWTAMISGYAQNGYDENALLVFSA 121
N+ VSW ++ISGYA G ++ ++
Sbjct: 72 HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNL 131
Query: 122 MLRS--GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK- 178
ML++ N+ T+S+ L ++ ++ GR I G + K F+ +FV S L+D+Y+K
Sbjct: 132 MLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKM 191
Query: 179 ------------------------------CGWIEDAWILFERIERKDVVSWNAMIGGLA 208
CG +ED+ LF + +D +SW +MI G
Sbjct: 192 GMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFT 251
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G + D+ +FR M + ++ D +T GS+L A G + L + Q+H II+ + +
Sbjct: 252 QNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIF 311
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +L+D+Y K +I+SA +++ M +++S TA++ G+ ++ +S+EA F DM +
Sbjct: 312 VASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQN-GYSEEAVKTFSDM--Q 368
Query: 329 KMGI--DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
K GI DD L +++ CAN+ASL G Q HA A V NAL+ +Y K G I
Sbjct: 369 KYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIE 428
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
D++R F+E+ K+ ++WT+L++GYA+ G +E I L++ M G+ P+ VTF+ +L ACS
Sbjct: 429 DSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACS 488
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
GL +G ++F MIN++ I+P +H++C++DLF+R G++E A N I +M P A W
Sbjct: 489 RAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISW 548
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
+ +L +C YGN +G+ AA L +++P + +YV+LS++Y A G W+ + RK M ++
Sbjct: 549 ATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDK 608
Query: 567 SLRKNPGYSFLQ 578
LRK PG S+++
Sbjct: 609 GLRKEPGCSWIK 620
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 218/426 (51%), Gaps = 46/426 (10%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L+ T+ +LL + + IH H++ G+ S + + + ++ Y+K+G + ARK
Sbjct: 141 LNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKV 200
Query: 88 FDRMPERNVV-------------------------------SWTAMISGYAQNGYDENAL 116
FD +PE+NVV SWT+MI+G+ QNG D +A+
Sbjct: 201 FDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAI 260
Query: 117 LVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLY 176
+F M ++ +Q+T+ S L AC + LQ G+ + I + + +N+FV SAL+D+Y
Sbjct: 261 DIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMY 320
Query: 177 AKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLG 236
KC I+ A +F+++ K+VVSW AM+ G G+++++ F M + G++PD FTLG
Sbjct: 321 CKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLG 380
Query: 237 SILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT 296
S++ + L + +Q H + GL S ++ +L+ +Y K GSI +++L+ +
Sbjct: 381 SVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFK 440
Query: 297 DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI 356
D ++ TAL+SG+A+ + E LF+ M+ + D V +L+ C+ + G QI
Sbjct: 441 DEVTWTALVSGYAQ-FGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQI 499
Query: 357 -------HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIA 408
H Q Y +ID+++++G I +A ++M + ISW +L++
Sbjct: 500 FESMINEHGIV-PIQDHY-----TCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLS 553
Query: 409 GYAKHG 414
+G
Sbjct: 554 SCRFYG 559
>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 769
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 190/585 (32%), Positives = 314/585 (53%), Gaps = 5/585 (0%)
Query: 2 NIVRANFKTGQLKQALKFSLSC--PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
+++ + GQ +A+ L D + D + S+++ C +HA +I
Sbjct: 135 SVITGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIKL 194
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
S+L +I Y + + A K F +P ++++SW+++I+G++Q G++ AL
Sbjct: 195 ESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGFEFEALSHL 254
Query: 120 SAMLRSGV-RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
ML GV N++ + S+L+AC+ + G I G K N +L D+YA+
Sbjct: 255 KEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAGCSLCDMYAR 314
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
CG+++ A +F +IER D SWN +I GLA G+ D++ +F M G PD +L S+
Sbjct: 315 CGFLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISLRSL 374
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML-KTD 297
L A + L + QIH IIK G + + SL+ +Y + + L+ K D
Sbjct: 375 LCAQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKAD 434
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
+S A+++ + + E LFK M++ + D + + +L C ++SL LG Q+H
Sbjct: 435 SVSWNAILTACLQHE-QPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVH 493
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
+++K + + N LIDMYAK G + A R FD M + +V+SW++LI GYA+ G+G
Sbjct: 494 CYSWKTGLVLEQFIKNGLIDMYAKCGSLRQARRIFDSMDNGDVVSWSTLIVGYAQSGFGE 553
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
EA+ L+++MK G+ PN VTF+ +L ACSH GL EG +L+ M ++ I P EH SCV
Sbjct: 554 EALILFREMKSSGIEPNHVTFVGVLTACSHVGLVEEGLKLYAIMQTEHGISPTKEHCSCV 613
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKS 537
VDL AR G L A I +M ++P +W +L AC GN L + AA N+ ++P S
Sbjct: 614 VDLLARAGHLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVDLAQKAAENILKIDPFNS 673
Query: 538 VNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+V+L +++ ++G W++A R M++ ++K PG S++ K
Sbjct: 674 TAHVLLCSMHASSGNWEDAALLRSSMKKHDVKKIPGQSWIDVEDK 718
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 148/534 (27%), Positives = 267/534 (50%), Gaps = 33/534 (6%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
TY+SL+ C ++ Q IH HI+ + + + L+ ++ Y K G + AR+ FD M
Sbjct: 66 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 125
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
PERN+VS+T++I+GY+QNG + A+ ++ ML++ + +QF + S ++ACA + G+
Sbjct: 126 PERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSIIKACACAGDVVLGK 185
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ + K +L ++AL+ +Y + + DA +F I KD++SW+++I G + G
Sbjct: 186 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLG 245
Query: 212 FNDDSFWLFRSMMRQGM-KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
F ++ + M+ G+ P+ + GS L+A + SQIH L IKL L + N +
Sbjct: 246 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLEL-TGNAIA 304
Query: 271 G-SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
G SL D+YA+ G + SA +++ + + D S +I+G A ++ ++ EA +F +M +
Sbjct: 305 GCSLCDMYARCGFLDSARRVFNQIERPDTASWNVIIAGLA-NNGYADEAVSVFSEM--RN 361
Query: 330 MGIDDVILCLMLNICANVASLNL--GRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
G + L +CA + L G QIH+F K D +V N+L+ MY ++
Sbjct: 362 SGFIPDAISLRSLLCAQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYC 421
Query: 388 ANRAFDEMGDK-NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
F++ +K + +SW +++ +H E + L+K M P+ +T +LL C
Sbjct: 422 CFNLFEDFRNKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCV 481
Query: 447 H-------TGLTCEGWELFTDMINKYRILPRAEHF--SCVVDLFARRGQLESAYNMIRQM 497
+ + C W+ T ++ E F + ++D++A+ G L A + M
Sbjct: 482 EISSLKLGSQVHCYSWK--TGLV--------LEQFIKNGLIDMYAKCGSLRQARRIFDSM 531
Query: 498 NIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEK-SVNYVVLSNIYTAA 550
+ S + I+G Y + GE A +M+ N+V + TA
Sbjct: 532 DNGDVVSWSTLIVG----YAQSGFGEEALILFREMKSSGIEPNHVTFVGVLTAC 581
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 212/417 (50%), Gaps = 12/417 (2%)
Query: 103 ISGYAQNGYDENALLVFS-AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGR 161
I+ +N + AL F A S + TY S + AC+ R L GR I I
Sbjct: 35 INSLCRNSFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSN 94
Query: 162 FVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFR 221
+ + + +L +Y KCG + DA +F+ + +++VS+ ++I G + G ++ L+
Sbjct: 95 CKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAITLYL 154
Query: 222 SMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG--SLIDVYAK 279
M++ + PD F GSI++A +++ Q+H +IK LESS+ L +LI +Y +
Sbjct: 155 KMLQADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIK--LESSSHLIAQNALIAMYVR 212
Query: 280 YGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI---DDVI 336
+ + A +++ + D+IS +++I+GF++ EA K+M+ G+ ++ I
Sbjct: 213 FNQMSDASKVFYGIPAKDLISWSSIIAGFSQ-LGFEFEALSHLKEML--SFGVFHPNEYI 269
Query: 337 LCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG 396
L C+++ + G QIH K + + +A G +L DMYA+ G + A R F+++
Sbjct: 270 FGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQIE 329
Query: 397 DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWE 456
+ SW +IAG A +GY EA+ ++ +M++ G +P+ ++ SLL A + C+G +
Sbjct: 330 RPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQGMQ 389
Query: 457 LFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGAC 513
+ + +I K L + ++ ++ L +N+ K + W+AIL AC
Sbjct: 390 IHSFII-KCGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTAC 445
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 184/553 (33%), Positives = 312/553 (56%), Gaps = 6/553 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D Y +LQ CI + +++HA I+ G+ S+ +ST ++ YAK+ ++ + K F
Sbjct: 170 DQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVF 229
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ M E NVVSW AMI+G+ N +A +F M+ GV + T+ +A +R +
Sbjct: 230 NTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVN 289
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER--IERKDVVSWNAMIGG 206
+ + G + N V +AL+D+ +KCG +++A +F I + WNAMI G
Sbjct: 290 KAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISG 349
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLES 265
GFN+ + LF M + + D +T S+ A + ++ + + + +H IK GLE
Sbjct: 350 YLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNA-IAALKCLSLGKKVHARAIKSGLEV 408
Query: 266 SN-KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ ++ ++ + YAK GS+ +++ M D+IS T+L++ +++ K A ++F +
Sbjct: 409 NYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDK-AIEIFSN 467
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M + + + +L CAN+ L G+Q+H K D + +AL+DMYAK G
Sbjct: 468 MRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGC 527
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ DA + F+ + + + +SWT++IAG+A+HG +A++L+++M G+ PN VTFL +LFA
Sbjct: 528 LGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFA 587
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
CSH GL EG + F M Y ++P EH++C+VDL +R G L A I +M ++P
Sbjct: 588 CSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEM 647
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
+W +LGAC ++GN LGELAA+ + + E S YV+LSN Y +G++ + R LM+
Sbjct: 648 VWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHLMK 707
Query: 565 ERSLRKNPGYSFL 577
E+ ++K PG S++
Sbjct: 708 EQGVKKEPGCSWI 720
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 163/525 (31%), Positives = 279/525 (53%), Gaps = 20/525 (3%)
Query: 4 VRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYES 63
++ F T +K + D+ L + LL+ C+D + +QA +H ++ + + S
Sbjct: 42 IQKPFATSGIKTPNSVKVDKTDSHLQIQPLVDLLRDCVDARFLKQAKTVHGFLLKSKF-S 100
Query: 64 NLH---LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
N H L V Y+K D+ +A + FD+M +RN SWT +I+G A+NG + F
Sbjct: 101 NHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFC 160
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M G+ +QF YS L+ C + ++ G M+ I F + FV +ALL++YAK
Sbjct: 161 EMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQ 220
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
IED++ +F + +VVSWNAMI G D+F LF MM +G+ PD T + +
Sbjct: 221 EIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAK 280
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
A ++ K ++ ++LG++S+ + +LID+ +K GS++ A RS+ + I+
Sbjct: 281 AIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEA----RSIFNSHFIT 336
Query: 301 C------TALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGR 354
C A+ISG+ R + K A +LF M + +D C + N A + L+LG+
Sbjct: 337 CRFNAPWNAMISGYLRSGFNEK-ALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGK 395
Query: 355 QIHAFAFK--YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAK 412
++HA A K + +Y ++ NA+ + YAK G + D + F+ M D+++ISWTSL+ Y++
Sbjct: 396 KVHARAIKSGLEVNY-VSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQ 454
Query: 413 HGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAE 472
+AIE++ M+ EG+ PN TF S+L +C++ L G ++ +I K +
Sbjct: 455 CSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVH-GIICKVGLDMDKC 513
Query: 473 HFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
S +VD++A+ G L A + +++ T S W+AI+ + +G
Sbjct: 514 IESALVDMYAKCGCLGDAKKVFNRISNADTVS-WTAIIAGHAQHG 557
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 189/572 (33%), Positives = 311/572 (54%), Gaps = 3/572 (0%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPSTY--MSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K L+ AL F + P Y LL+ C D ++ IH +ITN + +N+
Sbjct: 124 KNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVF 183
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
T V+ YAK + A K FDRMPER++VSW +I+G++QNG+ + AL + M G
Sbjct: 184 AMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEG 243
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
R + T + L A A + L G+ I G + F + + + +AL D+Y+KCG +E A
Sbjct: 244 QRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETAR 303
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
++F+ +++K VVSWN+M+ G G + + +F M+ +G+ P T+ L A
Sbjct: 304 LIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLG 363
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
+L + +H + +L L S + SLI +Y+K + A ++ ++ +S A+I
Sbjct: 364 DLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMIL 423
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
G+A++ S EA + F +M M D + ++ A ++ + IH +
Sbjct: 424 GYAQNGRVS-EALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLD 482
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
+ V AL+DMY+K G I A + FD + D++VI+W ++I GY HG G A++L+ KM
Sbjct: 483 KNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKM 542
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
K + PND+T+LS++ ACSH+GL EG F M Y + P +H+ +VDL R G+
Sbjct: 543 KKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGR 602
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
++ A++ I M I P +++ A GAC I+ N +GE AA+ LF++ P++ +V+L+NI
Sbjct: 603 IKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANI 662
Query: 547 YTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
Y + W + RK ME++ L+K PG S ++
Sbjct: 663 YASTSKWSKVAEVRKTMEKKGLKKTPGCSVVE 694
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 143/538 (26%), Positives = 272/538 (50%), Gaps = 21/538 (3%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
LL+ C K + H I +I NG + TK++ ++K G + A + F+ + ++
Sbjct: 55 LLELCTSMK---ELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKL 111
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG 155
+ M+ GYA+N E AL M V+ + ++ L+ C L+ G+ I G
Sbjct: 112 DALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHG 171
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD 215
+ F N+F + ++++YAKC I+DA+ +F+R+ +D+VSWN +I G + GF
Sbjct: 172 QLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKK 231
Query: 216 SFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLID 275
+ L M +G +PD TL ++L A+ LM IH I+ G ++ +L D
Sbjct: 232 ALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALAD 291
Query: 276 VYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDV 335
+Y+K GS+ +A ++ M + ++S +++ G+ ++ K A +F+ M+ + GID
Sbjct: 292 MYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEK-AIAVFEKML--EEGIDPT 348
Query: 336 ILCLM--LNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFD 393
+ +M L+ CA++ L G+ +H F + D +V N+LI MY+K + A+ F+
Sbjct: 349 GVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFN 408
Query: 394 EMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCE 453
+ + +SW ++I GYA++G EA+ + +MK GM P+ T +S++ A + +T
Sbjct: 409 NLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRH 468
Query: 454 GWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGAC 513
+ +I + + + +VD++++ G + A + ++ + + W+A++
Sbjct: 469 A-KWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVIT-WNAMIDG- 525
Query: 514 SIYGNTSLGELAARNLFD------MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
YG LG AA +LFD +EP + Y+ + + + +G D + K M++
Sbjct: 526 --YGTHGLGR-AALDLFDKMKKGAVEP-NDITYLSVISACSHSGLVDEGLRHFKSMKQ 579
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 197/548 (35%), Positives = 311/548 (56%), Gaps = 19/548 (3%)
Query: 40 CIDKKAERQAH--LIHAHIITNGYESNLHLSTKVIIFYA--KVGDVLSARKAFDRMPERN 95
C +QAH L+ H++ N S+K+I F A GD+ ARK F +M +
Sbjct: 21 CTSISKTKQAHALLLRTHLLHNPL-----FSSKLISFLALSHSGDLNYARKLFTQMQNPD 75
Query: 96 VVSWTAMISGYA--QNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMI 153
MI GYA QN Y+ +L F M+ GV + +TY L ACAR+ ++ GR
Sbjct: 76 PFICNTMIRGYARSQNPYEAVSLYYF--MVERGVPVDNYTYPFVLAACARLGAVKLGRRF 133
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN 213
+ K F +LFV +AL+ Y CG A +F+ +DVV+WN MI +G +
Sbjct: 134 HCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLS 193
Query: 214 DDSFWLFRSMMR-QGMKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGLESSNKLT 270
+ +F L M + ++PD T+ S++ A +G +E K +H +LGL+ + ++
Sbjct: 194 EKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKF--LHSYSKELGLDENLRVN 251
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
+++D+Y K I SA +++ + + D++S T+++SG A+ + +EA LF+ M L K+
Sbjct: 252 NAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKS-GYFQEALALFQKMQLNKI 310
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
+D++ L +L+ CA +L+ G+ IH K++ + D + AL+DMYAK G I A +
Sbjct: 311 ELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQ 370
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
F M +NV +W +LI G A HG+G +AI L+ +M+H+ ++P+DVTF++LL ACSH GL
Sbjct: 371 VFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGL 430
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
EG +F M NK++I PR EH+ CVVDL R +++ A I M IK + LW+ +L
Sbjct: 431 VDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLL 490
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
GAC G+ L E R + ++EP+ YV+LSN+Y WD+A K RK M+ + + K
Sbjct: 491 GACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEK 550
Query: 571 NPGYSFLQ 578
PG S+++
Sbjct: 551 TPGCSWIE 558
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/405 (30%), Positives = 194/405 (47%), Gaps = 11/405 (2%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D TY +L C A + H ++ NG+ S+L + +I FY G A
Sbjct: 109 VDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDV 168
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLR-SGVRANQFTYSSALRACARMRW 146
FD R+VV+W MI+ + G E A + M + +R ++ T S + ACA++
Sbjct: 169 FDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGN 228
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
L+ G+ + ++ ENL V +A+LD+Y KC IE A +F RI KDV+SW +M+ G
Sbjct: 229 LERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSG 288
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
LA G+ ++ LF+ M ++ D TL +L A L + IH LI K +
Sbjct: 289 LAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCD 348
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
L +L+D+YAK GSI A Q++R M ++ + ALI G A H ++A LF M
Sbjct: 349 LVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAM-HGHGEDAISLFDQME 407
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQI-HAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
K+ DDV +L C++ ++ G + A K+Q ++D+ ++ ++
Sbjct: 408 HDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKV 467
Query: 386 ADANRAFDEMGDK-NVISWTSLIAGYAKHGY-------GHEAIEL 422
DA + M K N + W +L+ G+ G IEL
Sbjct: 468 DDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIEL 512
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 6/227 (2%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K+G ++AL + LD T + +L C A Q IH I +L
Sbjct: 291 KSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLV 350
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
L T ++ YAK G + A + F RM RNV +W A+I G A +G+ E+A+ +F M
Sbjct: 351 LETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDK 410
Query: 127 VRANQFTYSSALRACARMRWL-QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
+ + T+ + L AC+ + +G M Q K + + ++DL + ++DA
Sbjct: 411 LMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDA 470
Query: 186 WILFERIERK-DVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
E + K + V W ++G G D + + R ++ ++PD
Sbjct: 471 LAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIE--LEPD 515
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 186/555 (33%), Positives = 296/555 (53%), Gaps = 1/555 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+ P +Y L + C K+ L H + L V+ Y K G + ARK
Sbjct: 8 VSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKV 67
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD M ERN+VSW +IS YA+NG + +FS ML + N TY LR+ L
Sbjct: 68 FDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGL 127
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G+ I + N V +A+ ++Y KCGW+E A ++FE++ K+ V+W ++ G
Sbjct: 128 EIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGY 187
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
D+ LF M+ +G++ D + +L+A G EL QIH I+KLGLES
Sbjct: 188 TQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEV 247
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ L+D Y K ++ SA + + + + + +S +ALI+G+ + +EA F+ +
Sbjct: 248 SVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEF-EEALKTFESLRT 306
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ + I+ + C+ +A N G Q HA A K +A+I MY++ G +
Sbjct: 307 RSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDY 366
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A R F+ + D + ++WT++IAGYA G EA++L+++M+ G+ PN VTF+++L ACSH
Sbjct: 367 ATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSH 426
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
+GL EG + M + Y + +H+ C+VD+++R G L+ A +IR M P A W
Sbjct: 427 SGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWK 486
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
+LG C Y N +GELAA NLF ++PE + Y+++ N+Y + G W A RK+M ER+
Sbjct: 487 CLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRKMMAERN 546
Query: 568 LRKNPGYSFLQSSKK 582
LRK S++ K
Sbjct: 547 LRKELSCSWITVKGK 561
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 206/399 (51%), Gaps = 7/399 (1%)
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
M +G+ + +Y AC +++ L GR+ +Q+ F+++++L +Y KCG
Sbjct: 1 MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
+ DA +F+ + +++VSWN +I A G D F +F +M+ KP+ T LR+
Sbjct: 61 LADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRS 120
Query: 242 --SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
+ G+E+ K QIH I+ GL S+ + ++ ++Y K G + A ++ M + + +
Sbjct: 121 LLNPSGLEIGK--QIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAV 178
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
+ T ++ G+ + + +A LF M+ + + +D+ + ++L CA + LN GRQIH
Sbjct: 179 AWTGIMVGYTQAERQ-MDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGH 237
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
K + +VG L+D Y K + A +AF+ + + N +SW++LI GY + G EA
Sbjct: 238 IVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEA 297
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD 479
++ ++ ++ + N T+ S+ ACS G + D I K ++ S ++
Sbjct: 298 LKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAI-KSSLVAYQHGESAMIT 356
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
+++R G+L+ A + ++ P A W+AI+ + GN
Sbjct: 357 MYSRCGRLDYATRVFESID-DPDAVAWTAIIAGYAYQGN 394
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 193/387 (49%), Gaps = 3/387 (0%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
+T + STY+ L+ ++ IH+H I +G SN ++T + Y K G + A
Sbjct: 106 ETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGA 165
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
F++M E+N V+WT ++ GY Q +AL +F+ M+ GV +++ +S L+ACA +
Sbjct: 166 ELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGL 225
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
L GR I G I K + V + L+D Y KC +E A FE I + VSW+A+I
Sbjct: 226 EELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALI 285
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G G +++ F S+ + + + FT SI +A + +Q H IK L
Sbjct: 286 TGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLV 345
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ ++I +Y++ G + A +++ S+ D ++ TA+I+G+A N + EA LF+
Sbjct: 346 AYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGN-APEALKLFRR 404
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQ-IHAFAFKYQSSYDAAVGNALIDMYAKSG 383
M + + V +L C++ + GRQ + + + Y + + ++D+Y+++G
Sbjct: 405 MQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAG 464
Query: 384 EIADANRAFDEMG-DKNVISWTSLIAG 409
+ +A M + +SW L+ G
Sbjct: 465 FLQEALELIRSMPFSPDAMSWKCLLGG 491
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 185/561 (32%), Positives = 319/561 (56%), Gaps = 12/561 (2%)
Query: 29 DPSTYMSLLQFC---IDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
D S+ +L+ C D+ +Q +H I G+ ++ + T ++ Y K V
Sbjct: 91 DGSSLSCVLKVCGCLFDRIVGKQ---VHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGE 147
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
+ FD M +NVVSWT++++GY QNG +E AL +FS M G++ N FT+++ L A
Sbjct: 148 RVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADG 207
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
++ G + + K +FV ++++++Y+K + DA +F+ +E ++ VSWN+MI
Sbjct: 208 AVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIA 267
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
G G + ++F LF M +G+K ++++ E+ Q+H +IK G +
Sbjct: 268 GFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDF 327
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT-DIISCTALISGFARDDNHSKEAFDLFKD 324
+ +L+ Y+K I A++L+ M +++S TA+ISG+ ++ + A +LF
Sbjct: 328 DLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQN-GRTDRAMNLFCQ 386
Query: 325 MILKKMGID--DVILCLMLNICA-NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
M ++ G++ + +LN CA AS+ G+Q H+ + K S V +AL+ MYAK
Sbjct: 387 M-RREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAK 445
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
G I AN F D++++SW S+I+GYA+HG G ++++++++M+ + + + +TF+ +
Sbjct: 446 RGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGV 505
Query: 442 LFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
+ AC+H GL EG F M+ Y I+P EH+SC+VDL++R G LE A ++I +M
Sbjct: 506 ISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPA 565
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRK 561
A++W +L AC ++ N LGELAA L ++P+ S YV+LSNIY AG W K RK
Sbjct: 566 GATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRK 625
Query: 562 LMEERSLRKNPGYSFLQSSKK 582
LM+ + ++K GYS+++ K
Sbjct: 626 LMDMKKVKKEAGYSWIEVKNK 646
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/438 (28%), Positives = 240/438 (54%), Gaps = 8/438 (1%)
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
+++ FD P++ + ++ +++N ++ AL +F + RSG + + S L+ C
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
+ G+ + K FVE++ V ++L+D+Y K +ED +F+ + K+VVSW ++
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKL 261
+ G G N+ + LF M +G+KP+ FT ++L A+ G +E K Q+H ++IK
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVE--KGVQVHTMVIKS 222
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDL 321
GL+S+ + S++++Y+K + A ++ SM + +S ++I+GF + EAF+L
Sbjct: 223 GLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFV-TNGLDLEAFEL 281
Query: 322 FKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
F M L+ + + I ++ +CAN+ ++ +Q+H K S +D + AL+ Y+K
Sbjct: 282 FYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSK 341
Query: 382 SGEIADANRAFDEM-GDKNVISWTSLIAGYAKHGYGHEAIELYKKM-KHEGMVPNDVTFL 439
EI DA + F M G +NV+SWT++I+GY ++G A+ L+ +M + EG+ PN+ TF
Sbjct: 342 CSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFS 401
Query: 440 SLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
S+L AC+ + E + F K S +V ++A+RG +ESA + ++
Sbjct: 402 SVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVD 461
Query: 500 KPTASLWSAILGACSIYG 517
+ S W++++ + +G
Sbjct: 462 RDLVS-WNSMISGYAQHG 478
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 166/456 (36%), Positives = 277/456 (60%), Gaps = 2/456 (0%)
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
M G A Y +A+ AC R L GR + + R+ +F+ + L+ +Y +CG
Sbjct: 1 MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 60
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
++DA + +R+ + VVSW MI G + + ++ LF M+R G P+ +TL ++L +
Sbjct: 61 LDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTS 120
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC 301
G + + Q+H L++K ES + SL+D+YAK +I+ A +++ ++ + D++SC
Sbjct: 121 CSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSC 180
Query: 302 TALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF 361
TA+ISG+A+ +EA DLF+ + + M + V ++ + +ASL+ G+Q+HA
Sbjct: 181 TAIISGYAQK-GLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALIL 239
Query: 362 KYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIE 421
+ + + A+ N+LIDMY+K G++ + R FD M +++V+SW +++ GY +HG GHE I
Sbjct: 240 RKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVIS 299
Query: 422 LYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLF 481
L+K + H+ + P+ VT L++L CSH GL EG ++F ++ + L H+ C++DL
Sbjct: 300 LFKDL-HKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLL 358
Query: 482 ARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYV 541
R G+LE A N+I M + T S+W ++LGAC ++ N +GEL A+ L +MEPE + NYV
Sbjct: 359 GRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYV 418
Query: 542 VLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
+LSNIY AAG W + K RKLM E+++ K PG S++
Sbjct: 419 ILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWI 454
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 123/387 (31%), Positives = 210/387 (54%), Gaps = 4/387 (1%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y + + CI+++A + +HA +IT Y + L T+++ Y + G + AR DRMP
Sbjct: 13 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
ER+VVSWT MISGY+Q AL +F MLR+G N++T ++ L +C+ + + G+
Sbjct: 73 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 132
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF 212
+ + K F ++FV S+LLD+YAK I++A +F+ + +DVVS A+I G A +G
Sbjct: 133 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGL 192
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS 272
++++ LFR + +GM+ + T +++ A G L Q+H LI++ L L S
Sbjct: 193 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS 252
Query: 273 LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI 332
LID+Y+K G + + +++ +ML+ ++S A++ G+ R E LFKD+ K++
Sbjct: 253 LIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGR-HGLGHEVISLFKDL-HKEVKP 310
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAFKYQSS-YDAAVGNALIDMYAKSGEIADANRA 391
D V L +L+ C++ ++ G I K QS+ +ID+ +SG + A
Sbjct: 311 DSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNL 370
Query: 392 FDEMGDKNVIS-WTSLIAGYAKHGYGH 417
+ M ++ S W SL+ H H
Sbjct: 371 IENMPFESTPSIWGSLLGACRVHANVH 397
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 145/266 (54%), Gaps = 8/266 (3%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T ++L C ++ Q +H+ ++ +ES++ + + ++ YAK ++ AR+ FD +
Sbjct: 113 TLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTL 172
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
PER+VVS TA+ISGYAQ G DE AL +F + G++ N T+++ + A + + L G+
Sbjct: 173 PERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGK 232
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ I + + ++++L+D+Y+KCG + + +F+ + + VVSWNAM+ G G
Sbjct: 233 QVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHG 292
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT- 270
+ LF+ + ++ +KPD TL ++L G + + I D ++K E S L
Sbjct: 293 LGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVK---EQSALLHT 348
Query: 271 ---GSLIDVYAKYGSIRSAYQLYRSM 293
G +ID+ + G + A L +M
Sbjct: 349 GHYGCIIDLLGRSGRLEKALNLIENM 374
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 178/548 (32%), Positives = 319/548 (58%), Gaps = 1/548 (0%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
++L C + E +H ++I GY+S+ + ++ YAK G +A F +P+
Sbjct: 193 TVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKP 252
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
++VSW A+I+G + ++ AL + M V + FT SSAL+ACA + ++ GR +
Sbjct: 253 DIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLH 312
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND 214
++ K + FV L+D+Y+KCG ++DA ++F+ + KDV+ WN++I G + G++
Sbjct: 313 SALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDI 372
Query: 215 DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLI 274
++ LF +M ++G++ + TL +IL+++ G Q+H + IK G + + SL+
Sbjct: 373 EAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLL 432
Query: 275 DVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD 334
D Y K + A +++ D+++ T++I+ +++ +EA ++ M + + D
Sbjct: 433 DSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQY-GLGEEALKMYLRMQDRDIKPDA 491
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE 394
I + N CAN+++ G+QIH K D GN+L++MYAK G I DA+ F+E
Sbjct: 492 FIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNE 551
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG 454
+ + ++SW+++I G A+HG+G +A++L+ +M G++PN +T +S+L AC+H GL E
Sbjct: 552 ISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEA 611
Query: 455 WELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACS 514
F M + I P EH++C+VD+ R G+L+ A ++++M + +A++W A+LGA
Sbjct: 612 RRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAAR 671
Query: 515 IYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGY 574
I+ N LG AA L +EPEKS +++L+NIY + G WDN K R+ M+ ++K PG
Sbjct: 672 IHKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGM 731
Query: 575 SFLQSSKK 582
S+++ K
Sbjct: 732 SWIELKDK 739
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 164/575 (28%), Positives = 281/575 (48%), Gaps = 56/575 (9%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
LLQF K IHA II L L +++ Y+K ARK E +
Sbjct: 57 LLQFTASKDVS-SGMAIHARIIRL---GLLGLRNRLVNLYSKCQCFRVARKLVIDSSEPD 112
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ- 154
+VSW+A+ISGY QNG E ALL + M G + N+FT+SS L+ C+ R L+ G+ I
Sbjct: 113 LVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIHR 172
Query: 155 ---------------------------------------GSIQKGRFVENLFVKSALLDL 175
G + K + + F +ALLD+
Sbjct: 173 VALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDM 232
Query: 176 YAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTL 235
YAK G E A +F I + D+VSWNA+I G + ND + L M + P FTL
Sbjct: 233 YAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTL 292
Query: 236 GSILRASVGGIELMKIS-QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML 294
S L+A I L+K+ Q+H ++K+ +E + + LID+Y+K G ++ A ++ M
Sbjct: 293 SSALKA-CAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMP 351
Query: 295 KTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGR 354
D+I ++ISG++ + + EA LF +M + + + L +L A +
Sbjct: 352 XKDVIVWNSIISGYS-NCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCE 410
Query: 355 QIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG 414
Q+H + K YD V N+L+D Y K + DA + F+ ++++++TS+I Y+++G
Sbjct: 411 QVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYG 470
Query: 415 YGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF 474
G EA+++Y +M+ + P+ F SL AC++ +G ++ ++ K +L
Sbjct: 471 LGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVL-KCGLLSDVFAG 529
Query: 475 SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEP 534
+ +V+++A+ G ++ A + +++ + S WSA++G + +G+ G A + + M
Sbjct: 530 NSLVNMYAKCGSIDDASCIFNEISWRGIVS-WSAMIGGLAQHGH---GRKALQLFYQMLK 585
Query: 535 EKSV-NYVVLSNIYTA---AGAWDNARKTRKLMEE 565
+ N++ L ++ +A AG AR+ LME+
Sbjct: 586 NGILPNHITLVSVLSACNHAGLVTEARRFFGLMEK 620
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 147/285 (51%), Gaps = 10/285 (3%)
Query: 10 TGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLST 69
T K+ L+F+ + T+L + FC Q H I I +GY+ + +++
Sbjct: 379 TNMYKEGLEFNQTTLSTILKSTAGSQANGFC------EQVHTIS---IKSGYQYDGYVAN 429
Query: 70 KVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA 129
++ Y K + A K F+ P ++V++T+MI+ Y+Q G E AL ++ M ++
Sbjct: 430 SLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKP 489
Query: 130 NQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILF 189
+ F +SS ACA + + G+ I + K + ++F ++L+++YAKCG I+DA +F
Sbjct: 490 DAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIF 549
Query: 190 ERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELM 249
I + +VSW+AMIGGLA G + LF M++ G+ P+ TL S+L A +
Sbjct: 550 NEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVT 609
Query: 250 KISQIHDLIIKL-GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ + L+ KL G+ + + ++D+ + G + A L + M
Sbjct: 610 EARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEM 654
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 197/583 (33%), Positives = 318/583 (54%), Gaps = 6/583 (1%)
Query: 9 KTGQLKQALK-FSLSCPDTL-LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K G L +K FS+ D + + T+ +L C K +H ++ +G +
Sbjct: 216 KCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGS 275
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ ++ Y+K G A K F M + V+W MISGY Q+G E +L F M+ SG
Sbjct: 276 IKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSG 335
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
V + T+SS L + ++ L+ + I I + ++F+ SAL+D Y KC + A
Sbjct: 336 VLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQ 395
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+F + DVV + AMI G G DS +FR +++ + P+ TL SIL +G +
Sbjct: 396 NIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPV-IGIL 454
Query: 247 ELMKIS-QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALI 305
+K+ ++H IIK G ++ + ++ID+YAK G + AY+++ + K DI+S ++I
Sbjct: 455 LALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMI 514
Query: 306 SGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS 365
+ A+ DN S A D+F+ M + + D V + L+ CAN+ S + G+ IH F K+
Sbjct: 515 TRCAQSDNPSA-AIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSL 573
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKK 425
+ D + LIDMYAK G + A F M +KN++SW S+IA HG +++ L+ +
Sbjct: 574 ASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHE 633
Query: 426 M-KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
M + G+ P+ +TFL ++ +C H G EG F M Y I P+ EH++CVVDLF R
Sbjct: 634 MVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRA 693
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLS 544
G+L AY ++ M P A +W +LGAC ++ N L E+A+ L D++P S YV++S
Sbjct: 694 GRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLIS 753
Query: 545 NIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKNILLL 587
N + A W++ K R LM+ER ++K PGYS+++ +K+ L +
Sbjct: 754 NAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFV 796
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 142/518 (27%), Positives = 259/518 (50%), Gaps = 5/518 (0%)
Query: 2 NIVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
+I+ + + G L QAL F + C D ST+ L++ C+ K + + + +
Sbjct: 108 SIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSL 167
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G + N +++ +I Y + G + K FDR+ +++ V W M++GYA+ G ++ + F
Sbjct: 168 GMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGF 227
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
S M + N T+ L CA + G + G + +K++LL +Y+KC
Sbjct: 228 SVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKC 287
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G +DA LF + R D V+WN MI G G ++S F M+ G+ PD T S+L
Sbjct: 288 GRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLL 347
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
+ L QIH I++ + LT +LID Y K + A ++ D++
Sbjct: 348 PSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVV 407
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
TA+ISG+ + + ++ ++F+ ++ K+ +++ L +L + + +L LGR++H F
Sbjct: 408 VFTAMISGYLHNGLY-IDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGF 466
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
K +G A+IDMYAK G + A F+ + ++++SW S+I A+ A
Sbjct: 467 IIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAA 526
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD 479
I+++++M G+ + V+ + L AC++ G + MI K+ + S ++D
Sbjct: 527 IDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMI-KHSLASDVYSESTLID 585
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
++A+ G L++A N+ + M K S W++I+ AC +G
Sbjct: 586 MYAKCGNLKAAMNVFKTMKEKNIVS-WNSIIAACGNHG 622
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 124/487 (25%), Positives = 233/487 (47%), Gaps = 5/487 (1%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER- 94
LLQ C + RQ +HA +I N + + +++ YA G K F R+ R
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 95 -NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMI 153
++ W ++IS + +NG AL + ML GV + T+ ++AC ++ +G +
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN 213
++ N FV S+L+ Y + G I+ LF+R+ +KD V WN M+ G A G
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 214 DDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSL 273
D F M + P+ T +L + + Q+H L++ G++ + SL
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280
Query: 274 IDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGID 333
+ +Y+K G A +L+R M + D ++ +ISG+ + +E+ F +MI + D
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQ-SGLMEESLTFFYEMISSGVLPD 339
Query: 334 DVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFD 393
+ +L + +L +QIH + ++ S D + +ALID Y K ++ A F
Sbjct: 340 AITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFS 399
Query: 394 EMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCE 453
+ +V+ +T++I+GY +G +++E+++ + + PN++T +S+L
Sbjct: 400 QCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKL 459
Query: 454 GWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGAC 513
G EL +I K R V+D++A+ G++ AY + +++ + S W++++ C
Sbjct: 460 GRELHGFIIKK-GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVS-WNSMITRC 517
Query: 514 SIYGNTS 520
+ N S
Sbjct: 518 AQSDNPS 524
>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1028
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 194/558 (34%), Positives = 305/558 (54%), Gaps = 5/558 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D T+ SLL C H+ II NL + ++ YAK G + AR+
Sbjct: 426 IDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQI 485
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F+ M +R+ VSW +I GY Q+ + A +F M G+ ++ +S L+AC + L
Sbjct: 486 FEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGL 545
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ + K L S+L+D+Y+KCG IEDA +F + VVS NA+I G
Sbjct: 546 YQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGY 605
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
+ +++ LF+ M+ +G+ P T +I+ A L +Q H IIK G S
Sbjct: 606 SQNNL-EEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEG 664
Query: 268 KLTG-SLIDVYAKYGSIRSAYQLYRSMLKT-DIISCTALISGFARDDNHSKEAFDLFKDM 325
+ G SL+ +Y + A L+ + I+ T ++SG +++ + +EA +K+M
Sbjct: 665 EYLGISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFY-EEALKFYKEM 723
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
D +L +C+ ++SL GR IH+ F D N LIDMYAK G++
Sbjct: 724 RHDGALPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDM 783
Query: 386 ADANRAFDEMGDK-NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+++ FDEM + NV+SW SLI GYAK+GY +A++++ M+ ++P+++TFL +L A
Sbjct: 784 KSSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTA 843
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
CSH G +G ++F MI +Y I R +H +C+VDL R G L+ A + I N+KP A
Sbjct: 844 CSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDAR 903
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
LWS++LGAC I+G+ GE+AA L ++EP+ S YV+LSNIY + G W+ A RK M
Sbjct: 904 LWSSLLGACRIHGDDMRGEIAAERLIELEPQNSSAYVLLSNIYASQGRWEEANALRKAMR 963
Query: 565 ERSLRKNPGYSFLQSSKK 582
+R ++K PGYS++ ++
Sbjct: 964 DRGVKKVPGYSWIDVGQR 981
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 160/520 (30%), Positives = 278/520 (53%), Gaps = 14/520 (2%)
Query: 51 LIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
++HA I G SN+++ + ++ Y+K + +A K F+ + ERN V W AMI GYA NG
Sbjct: 348 VVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNG 407
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
+ +F M SG + FT++S L CA L+ G I K + +NLFV +
Sbjct: 408 ESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGN 467
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
AL+D+YAKCG +EDA +FE + +D VSWN +IGG ++F LF M G+
Sbjct: 468 ALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVS 527
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
D L S L+A L + Q+H L +K GL+ SLID+Y+K G I A +++
Sbjct: 528 DGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVF 587
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
SM + ++S ALI+G+++ N+ +EA LF++M+ K + ++ ++ C SL
Sbjct: 588 SSMPEWSVVSMNALIAGYSQ--NNLEEAVVLFQEMLTKGVNPSEITFATIVEACHKPESL 645
Query: 351 NLGRQIHAFAFKYQ-SSYDAAVGNALIDMYAKSGEIADANRAFDEMGD-KNVISWTSLIA 408
LG Q H K+ SS +G +L+ +Y S +A+A F E+ K+++ WT +++
Sbjct: 646 TLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMS 705
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
G++++G+ EA++ YK+M+H+G +P+ TF+++L CS EG + + + + L
Sbjct: 706 GHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDL 765
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARN 528
+ ++D++A+ G ++S+ + +M + W++++ Y E A +
Sbjct: 766 DELTS-NTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLING---YAKNGYAEDALK- 820
Query: 529 LFDMEPEKSV--NYVVLSNIYTA---AGAWDNARKTRKLM 563
+FD + + + + + TA AG + RK ++M
Sbjct: 821 IFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMM 860
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 151/498 (30%), Positives = 249/498 (50%), Gaps = 10/498 (2%)
Query: 25 DTLLDPST--YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVL 82
D ++DP+T + L + +A ++ + G+ + VI Y +G +
Sbjct: 219 DGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTVINTYISLGKLK 278
Query: 83 SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA 142
AR F MP +VV+W MISG+ + G + A+ F M +S V++ + T S L A
Sbjct: 279 DARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIG 338
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
+ L G ++ K N++V S+L+ +Y+KC +E A +FE +E ++ V WNA
Sbjct: 339 IVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNA 398
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
MI G A G + LF M G D FT S+L +L SQ H +IIK
Sbjct: 399 MIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKK 458
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
L + + +L+D+YAK G++ A Q++ M D +S +I G+ +D+N S EAFDLF
Sbjct: 459 LTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENES-EAFDLF 517
Query: 323 KDMILKKMGI--DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYA 380
M + GI D L L C NV L G+Q+H + K G++LIDMY+
Sbjct: 518 --MRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYS 575
Query: 381 KSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
K G I DA + F M + +V+S +LIAGY+++ EA+ L+++M +G+ P+++TF +
Sbjct: 576 KCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTKGVNPSEITFAT 634
Query: 441 LLFACSHTGLTCEGWELFTDMINKYRILPRAEHFS-CVVDLFARRGQLESAYNMIRQMNI 499
++ AC G + F I K+ E+ ++ L+ ++ A + +++
Sbjct: 635 IVEACHKPESLTLGTQ-FHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSS 693
Query: 500 KPTASLWSAILGACSIYG 517
+ LW+ ++ S G
Sbjct: 694 PKSIVLWTGMMSGHSQNG 711
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/473 (26%), Positives = 214/473 (45%), Gaps = 49/473 (10%)
Query: 45 AERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMIS 104
A R +H+ + G +S L ++ YAK V A K F+ + E++V +W +M+S
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLS 133
Query: 105 GYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVE 164
Y+ G L F ++ + + N+FT+S L AR ++ GR I S+ K
Sbjct: 134 MYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLER 193
Query: 165 NLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMM 224
N + AL+D+YAKC + DA +F+ I + V W + G G +++ +F M
Sbjct: 194 NSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMR 253
Query: 225 RQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIR 284
+G +PD ++ I+ Y G ++
Sbjct: 254 GEGHRPDHLAFVTV-----------------------------------INTYISLGKLK 278
Query: 285 SAYQLYRSMLKTDIISCTALISGFARDDNHSKE-----AFDLFKDMILKKMGIDDVILCL 339
A L+ M D+++ +ISG H K A + F +M + L
Sbjct: 279 DARLLFGEMPSPDVVAWNVMISG------HGKRGCEIVAIEYFLNMRKSSVKSTRSTLGS 332
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN 399
+L+ VA+L+LG +HA A K + + VG++L+ MY+K ++ A + F+ + ++N
Sbjct: 333 VLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERN 392
Query: 400 VISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFT 459
+ W ++I GYA +G H+ +EL+ MK G +D TF SLL C+ E F
Sbjct: 393 DVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCA-VSHDLEMGSQFH 451
Query: 460 DMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
+I K ++ + +VD++A+ G LE A + M + S W+ I+G
Sbjct: 452 SIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVS-WNTIIGG 503
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 157/323 (48%), Gaps = 21/323 (6%)
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN 313
+H + LG++S +L +++D+YAK + A + + S L+ D+ + +++S ++
Sbjct: 82 VHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNS-LEKDVTAWNSMLSMYSSIGQ 140
Query: 314 HSK---EAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA 370
K LF+++I + ++L+ A ++ GRQIH K ++
Sbjct: 141 PGKVLRSFVSLFENLIFP----NKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSY 196
Query: 371 VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG 430
G AL+DMYAK + DA R FD + D N + WT L +GY K G EA+ ++++M+ EG
Sbjct: 197 CGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEG 256
Query: 431 MVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRG----Q 486
P+ + F++++ G + LF +M + P ++ ++ +RG
Sbjct: 257 HRPDHLAFVTVINTYISLGKLKDARLLFGEMPS-----PDVVAWNVMISGHGKRGCEIVA 311
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYV--VLS 544
+E NM R+ ++K T S ++L A I N LG + + ++ YV L
Sbjct: 312 IEYFLNM-RKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNI-YVGSSLV 369
Query: 545 NIYTAAGAWDNARKTRKLMEERS 567
++Y+ + A K + +EER+
Sbjct: 370 SMYSKCEKMEAAAKVFEALEERN 392
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 114/211 (54%), Gaps = 11/211 (5%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ G ++ALKF + L D +T++++L+ C + R+ IH+ I ++ +
Sbjct: 709 QNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDEL 768
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPER-NVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
S +I YAK GD+ S+ + FD M R NVVSW ++I+GYA+NGY E+AL +F +M +S
Sbjct: 769 TSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQS 828
Query: 126 GVRANQFTYSSALRACARMRWLQGGR----MIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
+ ++ T+ L AC+ + GR M+ G V+++ + ++DL + G+
Sbjct: 829 HIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHV---ACMVDLLGRWGY 885
Query: 182 IEDAWILFERIERK-DVVSWNAMIGGLAMQG 211
+++A E K D W++++G + G
Sbjct: 886 LQEADDFIEAQNLKPDARLWSSLLGACRIHG 916
>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Brachypodium distachyon]
Length = 707
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 190/540 (35%), Positives = 311/540 (57%), Gaps = 10/540 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H ++ G+ S+ L +I YAK G++ A + F MPERNVVSWTA++ G+ ++G
Sbjct: 26 LHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERNVVSWTALMVGFLRHGD 85
Query: 112 DENALLVFSAMLR-SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
L + AM S V N+FT S++L+AC + + G I G+ + F + V +
Sbjct: 86 ARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHGACVRAGFEGHHVVAN 145
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR----- 225
+L+ LY+K G I DA +F+ +++V+WNAMI G A G DS +FR M +
Sbjct: 146 SLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQEE 205
Query: 226 QGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK--LTGSLIDVYAKYGSI 283
+ +PD FT S+L+A + +Q+H ++ G+ +++ L G+L+D+Y K +
Sbjct: 206 EDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRCL 265
Query: 284 RS-AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLN 342
A Q++ + + + I T +I G A++ KEA +LF + D +L ++
Sbjct: 266 LPMAMQVFNRLEQKNAIQWTTVIVGHAQE-GQVKEAMELFGRFWSSGVRADGHVLSSVVG 324
Query: 343 ICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVIS 402
+ A+ A + GRQ+H + K + D +V N+LIDMY K G +A R F E+ +NV+S
Sbjct: 325 VFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARNVVS 384
Query: 403 WTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI 462
WT++I G KHG+G EAI ++++M+ EG+ P++V +L+LL ACSH+GL E F+ +
Sbjct: 385 WTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLVEECRRYFSAIR 444
Query: 463 NKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLG 522
+ R+ PRAEH++C+VDL R G+L A +++ M + PT +W +L AC ++ N ++G
Sbjct: 445 HDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMPMAPTVGVWQTLLSACRVHKNVTVG 504
Query: 523 ELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
A L ++ + VNYV+LSNI+ AG W ++ R M R LRK G S+++ K+
Sbjct: 505 REAGETLLAIDGDNPVNYVMLSNIFAEAGDWRECQRVRGAMRRRGLRKQGGCSWVEVGKE 564
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 210/435 (48%), Gaps = 21/435 (4%)
Query: 138 LRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDV 197
LRA A + GG + G++ K F + + + L+D+YAKCG + A +F + ++V
Sbjct: 11 LRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERNV 70
Query: 198 VSWNAMIGGLAMQGFNDDSFWLFRSMMR-QGMKPDCFTLGSILRASVGGIELMKISQIHD 256
VSW A++ G G + L +M + P+ FTL + L+A ++ IH
Sbjct: 71 VSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHG 130
Query: 257 LIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSK 316
++ G E + + SL+ +Y+K G I A +++ + ++++ A+ISG+A H +
Sbjct: 131 ACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAH-AGHGR 189
Query: 317 EAFDLFKDMILKKM-----GIDDVILCLMLNICANVASLNLGRQIHAFAF--KYQSSYDA 369
++ +F++M ++ D+ +L C ++ + G Q+HA ++ +A
Sbjct: 190 DSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNA 249
Query: 370 AVGNALIDMYAKSGEIAD-ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKH 428
+ AL+DMY K + A + F+ + KN I WT++I G+A+ G EA+EL+ +
Sbjct: 250 ILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWS 309
Query: 429 EGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLE 488
G+ + S++ + L +G ++ + L + S ++D++ + G +
Sbjct: 310 SGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANS-LIDMYHKCGLTD 368
Query: 489 SAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDM-----EPEKSVNYVVL 543
A R++ + S W+A++ +G+ G+ A +M EP++ V Y+ L
Sbjct: 369 EAARRFREVPARNVVS-WTAMINGLGKHGH---GQEAIHMFEEMRAEGVEPDE-VAYLAL 423
Query: 544 SNIYTAAGAWDNARK 558
+ + +G + R+
Sbjct: 424 LSACSHSGLVEECRR 438
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 124/234 (52%), Gaps = 7/234 (2%)
Query: 235 LGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML 294
+ +LRAS + +Q+H ++KLG S L +LID+YAK G +R A +++ M
Sbjct: 7 IADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMP 66
Query: 295 KTDIISCTALISGFARDDNHSKEAFDLFKDM-ILKKMGIDDVILCLMLNICANVASLNLG 353
+ +++S TAL+ GF R + ++E L M L + ++ L L C V + G
Sbjct: 67 ERNVVSWTALMVGFLRHGD-ARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAG 125
Query: 354 RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKH 413
IH + V N+L+ +Y+K G I DA R FD +N+++W ++I+GYA
Sbjct: 126 VWIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHA 185
Query: 414 GYGHEAIELYKKMKH-----EGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI 462
G+G +++ ++++M+ E P++ TF SLL AC G EG ++ M+
Sbjct: 186 GHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMV 239
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 109/210 (51%), Gaps = 3/210 (1%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYE--SNLHLSTKVIIFYAKVGDVL 82
D D T+ SLL+ C A R+ +HA ++ G SN L+ ++ Y K +L
Sbjct: 207 DHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRCLL 266
Query: 83 S-ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC 141
A + F+R+ ++N + WT +I G+AQ G + A+ +F SGVRA+ SS +
Sbjct: 267 PMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVF 326
Query: 142 ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN 201
A ++ GR + K ++ V ++L+D+Y KCG ++A F + ++VVSW
Sbjct: 327 ADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARNVVSWT 386
Query: 202 AMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
AMI GL G ++ +F M +G++PD
Sbjct: 387 AMINGLGKHGHGQEAIHMFEEMRAEGVEPD 416
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 86/187 (45%), Gaps = 3/187 (1%)
Query: 2 NIVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
++ + + GQ+K+A++ D S++ D Q +H + +
Sbjct: 286 TVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKT 345
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
++ ++ +I Y K G A + F +P RNVVSWTAMI+G ++G+ + A+ +F
Sbjct: 346 PAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMF 405
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA-LLDLYAK 178
M GV ++ Y + L AC+ ++ R +I+ R + A ++DL +
Sbjct: 406 EEMRAEGVEPDEVAYLALLSACSHSGLVEECRRYFSAIRHDRRLRPRAEHYACMVDLLGR 465
Query: 179 CGWIEDA 185
G + +A
Sbjct: 466 AGELSEA 472
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 189/572 (33%), Positives = 311/572 (54%), Gaps = 3/572 (0%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K G A+K L + + P+ T+ +L C + +H ++ G E +
Sbjct: 136 KNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSP 195
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
++ ++ Y+K + +ARK FD P+ ++VSW +ISGY QNG A +F M+ +G
Sbjct: 196 VANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAG 255
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
++ + T++S L + L+ + I G I + V ++F+KSAL+D+Y KC +E A
Sbjct: 256 IKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQ 315
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+ + D V MI G + G N ++ FR ++++ MKP T SI A G
Sbjct: 316 KILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLA 375
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
L ++H IIK L+ + +++D+YAK G + A +++ + + D I ++I+
Sbjct: 376 ALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMIT 435
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
+++ EA +LF+ M ++ D V + L+ CAN+ +L+ G++IH K
Sbjct: 436 SCSQN-GRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLR 494
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
D ++LIDMYAK G + + R FD M ++N +SW S+I+ Y HG E + L+ +M
Sbjct: 495 SDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEM 554
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
G+ P+ VTFL ++ AC H G EG + M +Y I R EH++CV D+F R G+
Sbjct: 555 LRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGR 614
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
L+ A+ I M P A +W +LGAC I+GN L E+A+++LFD++P S YV+L+N+
Sbjct: 615 LDEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANV 674
Query: 547 YTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
AG W K R +M+ER +RK PGYS+++
Sbjct: 675 QAGAGKWRKVLKVRSIMKERGVRKVPGYSWIE 706
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 150/519 (28%), Positives = 258/519 (49%), Gaps = 10/519 (1%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNG 60
++R GQ AL F L + P T+ +++ C K+ + ++H + G
Sbjct: 29 MIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPYVVKACCGLKSVKMGKIVHETVNLMG 88
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+ ++ + + +I YA+ G + A+ FD +P+++ V W M++GY +NG NA+ +F
Sbjct: 89 LKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFL 148
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M S ++ N T++ L CA L G + G + V + LL +Y+KC
Sbjct: 149 EMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQ 208
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
++ A LF+ + D+VSWN +I G G ++ LFR M+ G+KPD T S L
Sbjct: 209 CLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLP 268
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
+ L +IH II+ + L +LID+Y K + A ++ D +
Sbjct: 269 CVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVV 328
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
CT +ISG+ + +KEA + F+ ++ ++M V + A +A+LNLG+++H
Sbjct: 329 CTTMISGYVLNGK-NKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSI 387
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
K + VG+A++DMYAK G + A R F+ + +K+ I W S+I +++G EAI
Sbjct: 388 IKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAI 447
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI-NKYRILPRAEHFSCVVD 479
L+++M EG + V+ L AC++ G E+ MI R AE S ++D
Sbjct: 448 NLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAE--SSLID 505
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
++A+ G L + + +M + S W++I+ A YGN
Sbjct: 506 MYAKCGNLNFSRRVFDRMQERNEVS-WNSIISA---YGN 540
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 123/456 (26%), Positives = 233/456 (51%), Gaps = 7/456 (1%)
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
Y + G + A+ F + +W MI G+ G ALL + ML +GV +++T+
Sbjct: 2 YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTF 61
Query: 135 SSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER 194
++AC ++ ++ G+++ ++ E++FV S+L+ LYA+ G + DA LF+ I +
Sbjct: 62 PYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQ 121
Query: 195 KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQI 254
KD V WN M+ G G + ++ +F M +KP+ T +L L +Q+
Sbjct: 122 KDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQL 181
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH 314
H + + GLE + + +L+ +Y+K +++A +L+ + ++D++S +ISG+ + +
Sbjct: 182 HGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQ-NGL 240
Query: 315 SKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNA 374
EA LF+ MI + D + L + SL ++IH + ++ D + +A
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSA 300
Query: 375 LIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
LID+Y K ++ A + + + + T++I+GY +G EA+E ++ + E M P
Sbjct: 301 LIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPT 360
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI 494
VTF S+ A + G EL +I K ++ + S ++D++A+ G+L+ A +
Sbjct: 361 SVTFSSIFPAFAGLAALNLGKELHGSII-KTKLDEKCHVGSAILDMYAKCGRLDLACRVF 419
Query: 495 RQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
++ K A W++++ +CS G GE A NLF
Sbjct: 420 NRITEK-DAICWNSMITSCSQNGRP--GE--AINLF 450
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 168/324 (51%), Gaps = 6/324 (1%)
Query: 175 LYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFT 234
+Y + G ++DA LF ++ +WN MI G M G + + + M+ G+ PD +T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 235 LGSILRASVG--GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRS 292
+++A G +++ KI +H+ + +GL+ + SLI +YA+ G + A L+ +
Sbjct: 61 FPYVVKACCGLKSVKMGKI--VHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDN 118
Query: 293 MLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNL 352
+ + D + +++G+ ++ + S A +F +M ++ + V +L++CA+ A L+L
Sbjct: 119 IPQKDSVLWNVMLNGYVKNGD-SGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDL 177
Query: 353 GRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAK 412
G Q+H A D+ V N L+ MY+K + A + FD +++SW +I+GY +
Sbjct: 178 GTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQ 237
Query: 413 HGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAE 472
+G EA L++ M G+ P+ +TF S L C + L+ + + I ++ ++
Sbjct: 238 NGLMGEAEHLFRGMISAGIKPDSITFASFL-PCVNELLSLKHCKEIHGYIIRHAVVLDVF 296
Query: 473 HFSCVVDLFARRGQLESAYNMIRQ 496
S ++D++ + +E A ++ Q
Sbjct: 297 LKSALIDIYFKCRDVEMAQKILCQ 320
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 185/560 (33%), Positives = 308/560 (55%), Gaps = 12/560 (2%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIIT---NGYESNLHLSTKVIIFYAKVGDVLS 83
L P++ SL++ + + R HA II N S ++ ++ Y+K+ S
Sbjct: 3 FLSPNSLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIY--NHLVNMYSKLDRPNS 60
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
A+ P R+VV+WTA+I+G QNG +AL FS M R ++ N FT+ A +A
Sbjct: 61 AQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGS 120
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
+R G+ + K + ++FV + D+Y+K G E+A +F+ + +++ +WNA
Sbjct: 121 LRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAY 180
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGL 263
+ ++G DD+ F +G +P+ T + L A G L Q+H +++ G
Sbjct: 181 LSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGF 240
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
E+ + LID Y K + + ++ + K + +S ++I + ++D K +
Sbjct: 241 EADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLR 300
Query: 324 DMILKKMGID--DVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
+K GI+ D ++ +L+ CA ++ L +G+ +H A K + VG+AL+DMY K
Sbjct: 301 ---ARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGK 357
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMK--HEGMVPNDVTFL 439
G I DA RAFDEM ++N+++W ++I GYA G A+ L+ +M + PN VTF+
Sbjct: 358 CGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFV 417
Query: 440 SLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
+L ACS G G E+F M +Y I P AEH++CVVDL R G +E AY I++M I
Sbjct: 418 CVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPI 477
Query: 500 KPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKT 559
+PT S+W A+LGA ++G + LG++AA NLF+++P S N+V+LSN++ AAG W+ A
Sbjct: 478 RPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLV 537
Query: 560 RKLMEERSLRKNPGYSFLQS 579
RK M++ ++K G S++ +
Sbjct: 538 RKEMKDVGIKKGAGCSWITA 557
>gi|296087156|emb|CBI33530.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 194/547 (35%), Positives = 307/547 (56%), Gaps = 3/547 (0%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
+ +LQ C D R +H +++ + + K++ Y K G + A + FD MP
Sbjct: 62 FSQILQECTDAGDLRTGMSVHTYLVKLNINGFILIWNKLLSLYLKFGHIHHAHQLFDTMP 121
Query: 93 ERNVVSWTAMISGYAQNGYDENALL-VFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
R+VVS+ MIS +N YD L+ ++S M + V+ N T++ + AC + L+
Sbjct: 122 RRDVVSFNTMISASVRNNYDALDLVGLYSKMKKEDVKPNHITFAGLIGACDGLIALRLRG 181
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ + N FV S+L+D YAK +EDA F I D+VSWN MI G A
Sbjct: 182 IFHAHTVRCGLSSNEFVGSSLVDGYAKQMKLEDAIKAFNEIMELDLVSWNIMIDGCARNN 241
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
+ + +F M++ ++ D FTL SI++ +L Q H IKLGL +
Sbjct: 242 SKEHAVRMFSQMLKGNVRVDGFTLTSIIKTCSKPGDLKHGMQFHGSAIKLGLAHETPIYN 301
Query: 272 SLIDVYAK-YGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
+LI +Y+K + S +++ S+ + +IIS TA+ISGF +++ ++EA LFK+M+ +
Sbjct: 302 ALITMYSKCEKGVASPVKIFGSISEPNIISWTAMISGFMQNEQ-NEEAIGLFKEMLRLGV 360
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
+D +L + N+A+L G+QIHA K D +V NALIDMY+K G + DA+
Sbjct: 361 RENDFSFSSILPVYGNLANLEQGKQIHARIIKSWFGLDLSVNNALIDMYSKCGSLEDAHL 420
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
F +MG +V+S T++I Y +HG G EA+E+ +MK EG+VP+ VTFL L+ACSH GL
Sbjct: 421 VFMKMGKHDVVSCTTMIMSYGQHGKGKEALEILAEMKSEGLVPDGVTFLGCLYACSHGGL 480
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
EG +F MI + + P+ EHF+CVVD+ R G+L A N I +M I+ +W +L
Sbjct: 481 VEEGVRVFKIMIEDHNLKPKREHFACVVDMLGRAGRLNEAENFIDEMGIESDVLVWETLL 540
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
GAC ++G LGE +A+ + +++P + YV+L+NIY G+W++ R+ + L+K
Sbjct: 541 GACRVHGEMVLGEKSAQKIMELQPGRHGPYVLLANIYAERGSWEDKVMVREKLVSHGLKK 600
Query: 571 NPGYSFL 577
G S++
Sbjct: 601 QVGCSWV 607
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 198/392 (50%), Gaps = 16/392 (4%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ L+ C A R + HAH + G SN + + ++ YAK + A KAF+ +
Sbjct: 163 TFAGLIGACDGLIALRLRGIFHAHTVRCGLSSNEFVGSSLVDGYAKQMKLEDAIKAFNEI 222
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
E ++VSW MI G A+N E+A+ +FS ML+ VR + FT +S ++ C++ L+ G
Sbjct: 223 MELDLVSWNIMIDGCARNNSKEHAVRMFSQMLKGNVRVDGFTLTSIIKTCSKPGDLKHGM 282
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKC-GWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
GS K + +AL+ +Y+KC + +F I +++SW AMI G
Sbjct: 283 QFHGSAIKLGLAHETPIYNALITMYSKCEKGVASPVKIFGSISEPNIISWTAMISGFMQN 342
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIK--LGLESSNK 268
N+++ LF+ M+R G++ + F+ SIL L + QIH IIK GL+ S
Sbjct: 343 EQNEEAIGLFKEMLRLGVRENDFSFSSILPVYGNLANLEQGKQIHARIIKSWFGLDLS-- 400
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +LID+Y+K GS+ A+ ++ M K D++SCT +I + + KEA ++ +M +
Sbjct: 401 VNNALIDMYSKCGSLEDAHLVFMKMGKHDVVSCTTMIMSYGQHGK-GKEALEILAEMKSE 459
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQ-----IHAFAFKYQSSYDAAVGNALIDMYAKSG 383
+ D V L C++ + G + I K + + A V +DM ++G
Sbjct: 460 GLVPDGVTFLGCLYACSHGGLVEEGVRVFKIMIEDHNLKPKREHFACV----VDMLGRAG 515
Query: 384 EIADANRAFDEMG-DKNVISWTSLIAGYAKHG 414
+ +A DEMG + +V+ W +L+ HG
Sbjct: 516 RLNEAENFIDEMGIESDVLVWETLLGACRVHG 547
>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic [Vitis vinifera]
gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 187/555 (33%), Positives = 310/555 (55%), Gaps = 2/555 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY +++ C + +H +I +G + ++++ +II YAK+G + SA F
Sbjct: 125 DNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVF 184
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
MP R++VSW +MISGY G +L F M SG++ ++F+ L AC+ +L+
Sbjct: 185 REMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLR 244
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ I + + R ++ V+++L+D+YAKCG ++ A LF++I K +V+WNAMIGG +
Sbjct: 245 NGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYS 304
Query: 209 MQGFNDDSFWLFRSMMRQG-MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
+ + +SF R M G + PD T+ ++L ++ +H I+ G
Sbjct: 305 LNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHL 364
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
L +L+D+Y + G ++ A L+ M + ++IS A+I+ + ++ +++A LF+D+
Sbjct: 365 VLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKN-GENRKAMTLFQDLCN 423
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
K + D + +L A +ASL QIH + K + + V N+++ MY K G +
Sbjct: 424 KTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLR 483
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A FD M K+VISW ++I YA HG+G +IEL+ +M+ +G PN TF+SLL +CS
Sbjct: 484 AREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSV 543
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
GL EGWE F M Y I P EH+ C++DL R G L+ A N I +M + PTA +W
Sbjct: 544 AGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPTARIWG 603
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
++L A G+ L E+AA ++ +E + + YV+LSN+Y AG W++ + + M++
Sbjct: 604 SLLTASRNKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVERIKFHMKKEG 663
Query: 568 LRKNPGYSFLQSSKK 582
L K+ G S + S K
Sbjct: 664 LEKSVGCSVVDLSSK 678
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 128/451 (28%), Positives = 231/451 (51%), Gaps = 6/451 (1%)
Query: 69 TKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR 128
T+ + Y + G + +A F+ M + + W MI G+ NG +A+ + M GVR
Sbjct: 64 TRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVR 123
Query: 129 ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWIL 188
+ FTY ++AC + L G + G + K ++++ ++L+ +YAK G IE A ++
Sbjct: 124 GDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMV 183
Query: 189 FERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIE 247
F + +D+VSWN+MI G G S FR M G+K D F++ IL A S+ G
Sbjct: 184 FREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGF- 242
Query: 248 LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG 307
L +IH +++ LE + SL+D+YAK G + A +L+ + I++ A+I G
Sbjct: 243 LRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGG 302
Query: 308 FARDDNHSKEAFDLFKDMIL-KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
++ + S E+F + M K+ D + + +L CA + ++ LG+ +H FA +
Sbjct: 303 YSL-NAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFL 361
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
+ AL+DMY + G++ A F +M ++N+ISW ++IA Y K+G +A+ L++ +
Sbjct: 362 PHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDL 421
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
++ + P+ T S+L A + E E + K ++ + +V ++ + G
Sbjct: 422 CNKTLKPDATTIASILPAYAELASLREA-EQIHGYVTKLKLDSNTFVSNSIVFMYGKCGN 480
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYG 517
L A + +M K S W+ ++ A +I+G
Sbjct: 481 LLRAREIFDRMTFKDVIS-WNTVIMAYAIHG 510
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 189/384 (49%), Gaps = 9/384 (2%)
Query: 20 SLSCPDTL------LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVII 73
SLSC + LD + + +L C + R IH ++ + E ++ + T ++
Sbjct: 211 SLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVD 270
Query: 74 FYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG-VRANQF 132
YAK G + A + FD++ ++++V+W AMI GY+ N + M G + +
Sbjct: 271 MYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWI 330
Query: 133 TYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI 192
T + L CA++ + G+ + G + F+ +L +++AL+D+Y +CG ++ A LF ++
Sbjct: 331 TMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQM 390
Query: 193 ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS 252
++++SWNAMI G N + LF+ + + +KPD T+ SIL A L +
Sbjct: 391 NERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAE 450
Query: 253 QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDD 312
QIH + KL L+S+ ++ S++ +Y K G++ A +++ M D+IS +I +A
Sbjct: 451 QIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYA-IH 509
Query: 313 NHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQ-IHAFAFKYQSSYDAAV 371
+ + +LF +M K + +L C+ +N G + ++ Y +
Sbjct: 510 GFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEH 569
Query: 372 GNALIDMYAKSGEIADANRAFDEM 395
++D+ ++G + A +EM
Sbjct: 570 YGCILDLIGRTGNLDHAKNFIEEM 593
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 186/555 (33%), Positives = 304/555 (54%), Gaps = 2/555 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY S+ + C +IH +I G ++ + + ++ Y K A F
Sbjct: 105 DSYTYPSVFKACGGLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLF 164
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ MPE++V W +IS Y Q+G ++AL F M R G N T ++A+ +CAR+ L
Sbjct: 165 NEMPEKDVACWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLN 224
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G I + F+ + F+ SAL+D+Y KCG +E A +FE++ +K VV+WN+MI G
Sbjct: 225 RGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYG 284
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
++G LF+ M +G+KP TL S++ L++ +H I+ ++
Sbjct: 285 LKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVF 344
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ SL+D+Y K G + A ++++ + K+ ++S +ISG+ + EA LF +M
Sbjct: 345 VNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLF-EALGLFSEMRKS 403
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ D + +L C+ +A+L G++IH + + + V AL+DMYAK G + +A
Sbjct: 404 YVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEA 463
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
F + ++++SWTS+I Y HG+ + A+EL+ +M + P+ V FL++L AC H
Sbjct: 464 FSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHA 523
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQ-MNIKPTASLWS 507
GL EG F MIN Y I+PR EH+SC++DL R G+L AY +++Q I+ L S
Sbjct: 524 GLVDEGCYYFNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLS 583
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
+ AC ++ N LG AR L D +P+ S Y++LSN+Y +A WD R R M+E
Sbjct: 584 TLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELG 643
Query: 568 LRKNPGYSFLQSSKK 582
L+KNPG S+++ ++K
Sbjct: 644 LKKNPGCSWIEINQK 658
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/493 (25%), Positives = 247/493 (50%), Gaps = 5/493 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D + LL+ C++ K+ +Q LIH ++T G ++++ L +I Y A+
Sbjct: 1 MDTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCV 60
Query: 88 FDRMPERNVVS-WTAMISGYAQNGYDENALLVFSAMLRSG-VRANQFTYSSALRACARMR 145
FD M +S W +++GY +N AL +F +L ++ + +TY S +AC +
Sbjct: 61 FDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLH 120
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
G+MI + K + ++ V S+L+ +Y KC E A LF + KDV WN +I
Sbjct: 121 RYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVIS 180
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
G D+ F M R G +P+ T+ + + + ++L + +IH+ +I G
Sbjct: 181 CYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLL 240
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ ++ +L+D+Y K G + A +++ M K +++ ++ISG+ + LFK M
Sbjct: 241 DSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGD-IISCIQLFKRM 299
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ + L ++ +C+ A L G+ +H + + + D V ++L+D+Y K G++
Sbjct: 300 YNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKV 359
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A + F + V+SW +I+GY G EA+ L+ +M+ + + +TF S+L AC
Sbjct: 360 ELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTAC 419
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
S +G E+ +I K ++ ++D++A+ G ++ A+++ + + + S
Sbjct: 420 SQLAALEKGKEIHNLIIEK-KLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVS- 477
Query: 506 WSAILGACSIYGN 518
W++++ A +G+
Sbjct: 478 WTSMITAYGSHGH 490
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 125/447 (27%), Positives = 222/447 (49%), Gaps = 37/447 (8%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITN 59
++ +++G K AL++ +P+ T + + C + IH +I +
Sbjct: 177 TVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINS 236
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G+ + +S+ ++ Y K G + A + F++MP++ VV+W +MISGY G + + +F
Sbjct: 237 GFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLF 296
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
M GV+ T SS + C+R L G+ + G + R ++FV S+L+DLY KC
Sbjct: 297 KRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKC 356
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G +E A +F+ I + VVSWN MI G +G ++ LF M + ++ D T S+L
Sbjct: 357 GKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVL 416
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
A L K +IH+LII+ L+++ + G+L+D+YAK G++ A+ +++ + K D++
Sbjct: 417 TACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLV 476
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
S T++I+ + H+ A +LF +M+ + D V +L+ C + ++ G +
Sbjct: 477 SWTSMITAYG-SHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEG----CY 531
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
F N +I++Y G I V ++ LI + G HEA
Sbjct: 532 YF-----------NQMINVY---GIIP------------RVEHYSCLIDLLGRAGRLHEA 565
Query: 420 IELYKKMKHEGMVPNDVTFLSLLF-AC 445
E+ ++ + +DV LS LF AC
Sbjct: 566 YEI---LQQNPEIRDDVELLSTLFSAC 589
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 183/553 (33%), Positives = 312/553 (56%), Gaps = 6/553 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D Y +LQ CI + +++HA I+ G+ S+ +ST ++ YAK+ ++ + K F
Sbjct: 170 DQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVF 229
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ M E NVVSW AMI+G+ N +A +F M+ GV + T+ +A +R +
Sbjct: 230 NTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVN 289
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER--IERKDVVSWNAMIGG 206
+ + G + N V +AL+D+ +KCG +++A +F I + WNAMI G
Sbjct: 290 KAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISG 349
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLES 265
GFN+ + LF M + + D +T S+ A + ++ + + + +H IK GLE
Sbjct: 350 YLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNA-IAALKCLSLGKKVHARAIKSGLEV 408
Query: 266 SN-KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ ++ ++ + YAK GS+ +++ M D+IS T+L++ +++ K A ++F +
Sbjct: 409 NYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDK-AIEIFSN 467
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M + + + +L CAN+ L G+Q+H K D + +AL+DMYAK G
Sbjct: 468 MRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGC 527
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ DA + F+ + + + +SWT++IAG+A+HG +A++L+++M G+ PN VTFL +LFA
Sbjct: 528 LGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFA 587
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
CSH GL EG + F M Y ++P EH++C+VDL +R G L A I +M ++P
Sbjct: 588 CSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEM 647
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
+W +LGAC ++GN LGELAA+ + + E S YV+LSN Y +G++ + R +M+
Sbjct: 648 VWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHVMK 707
Query: 565 ERSLRKNPGYSFL 577
E+ ++K PG S++
Sbjct: 708 EQGVKKEPGCSWI 720
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 163/525 (31%), Positives = 279/525 (53%), Gaps = 20/525 (3%)
Query: 4 VRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYES 63
++ F T +K + D+ L + LL+ C+D + +QA +H ++ + + S
Sbjct: 42 IQKPFATSGIKTPNSVKVDKTDSHLQIQPLVDLLRDCVDARFLKQAKTVHGFLLKSKF-S 100
Query: 64 NLH---LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
N H L V Y+K D+ +A + FD+M +RN SWT +I+G A+NG + F
Sbjct: 101 NHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFC 160
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M G+ +QF YS L+ C + ++ G M+ I F + FV +ALL++YAK
Sbjct: 161 EMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQ 220
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
IED++ +F + +VVSWNAMI G D+F LF MM +G+ PD T + +
Sbjct: 221 EIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAK 280
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
A ++ K ++ ++LG++S+ + +LID+ +K GS++ A RS+ + I+
Sbjct: 281 AIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEA----RSIFNSHFIT 336
Query: 301 C------TALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGR 354
C A+ISG+ R + K A +LF M + +D C + N A + L+LG+
Sbjct: 337 CRFNAPWNAMISGYLRSGFNEK-ALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGK 395
Query: 355 QIHAFAFK--YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAK 412
++HA A K + +Y ++ NA+ + YAK G + D + F+ M D+++ISWTSL+ Y++
Sbjct: 396 KVHARAIKSGLEVNY-VSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQ 454
Query: 413 HGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAE 472
+AIE++ M+ EG+ PN TF S+L +C++ L G ++ +I K +
Sbjct: 455 CSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVH-GIICKVGLDMDKC 513
Query: 473 HFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
S +VD++A+ G L A + +++ T S W+AI+ + +G
Sbjct: 514 IESALVDMYAKCGCLGDAKKVFNRISNADTVS-WTAIIAGHAQHG 557
>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 181/550 (32%), Positives = 312/550 (56%), Gaps = 1/550 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ +L + +H ++ +G + + ++ Y+K + ARK F
Sbjct: 110 DSVTFACVLSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLF 169
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D MP+ ++V W MI GY QNG+ ++A ++F+ M+ +G++ + T++S L + A L+
Sbjct: 170 DMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLK 229
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
+ I G I + + ++++ SAL+DLY KC A +F + D+V + AMI G
Sbjct: 230 QIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYV 289
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
+ G N D+ +FR ++++ M P+ T SIL A G + ++H IIK LE
Sbjct: 290 LNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCP 349
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +++++YAK G + A+ ++ + D I ++I+ F++D +EA LF+ M ++
Sbjct: 350 VGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQD-GKPEEAIYLFRQMGME 408
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ D V + L+ CAN+ +L+ G++IH F K D +ALI+MYAK G++ A
Sbjct: 409 GVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIA 468
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
F+ M +KN ++W S+IA Y HGY +++ L+ M EG+ P+ +TFL++L +C H
Sbjct: 469 RLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHA 528
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
G +G F M +Y I + EH++C+ DLF R G L+ A+ +I M P AS+W
Sbjct: 529 GQVEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGT 588
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+LGAC ++GN L E+A+R L D+EP+ S Y++L+++ AG W + K + LM+ER +
Sbjct: 589 LLGACRVHGNVELAEVASRYLLDLEPKNSGYYLLLTHVLADAGKWRSVHKIQHLMKERGV 648
Query: 569 RKNPGYSFLQ 578
+K PG S+++
Sbjct: 649 QKVPGCSWIE 658
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 153/545 (28%), Positives = 279/545 (51%), Gaps = 11/545 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ +++ C R +I I+ G++ ++ +++ +I YA G + AR+ F
Sbjct: 9 DKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRFF 68
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D+M +++ V W MI+GY Q G ++A+ +F M+ S + + T++ L ++
Sbjct: 69 DKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVE 128
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
GR + G + + V + L+ +Y+K + DA LF+ + + D+V WN MIGG
Sbjct: 129 YGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYV 188
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
GF DD+ LF M+ G+KPD T S L + L +I +IH I++ G+
Sbjct: 189 QNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVY 248
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
L +LID+Y K A +++ K DI+ TA+ISG+ + +K+A ++F+ ++ K
Sbjct: 249 LNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVL-NGMNKDALEIFRWLLQK 307
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
KM + + +L CA +A++ LGR++H + K + VG+A+++MYAK G + A
Sbjct: 308 KMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLA 367
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ F + K+ I W S+I +++ G EAI L+++M EG+ + VT + L AC++
Sbjct: 368 HLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANI 427
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA---YNMIRQMNIKPTASL 505
G E+ MI K S +++++A+ G+L A +N++++ N
Sbjct: 428 PALHYGKEIHGFMI-KGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKN----EVA 482
Query: 506 WSAILGACSIYGNTSLGELAARNLFD--MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
W++I+ A +G + N+ + ++P+ +LS+ A D R R +
Sbjct: 483 WNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMT 542
Query: 564 EERSL 568
EE +
Sbjct: 543 EEYGI 547
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 208/389 (53%), Gaps = 3/389 (0%)
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
ML GV +++T+ ++ C + ++ G++IQ I + F ++FV S+L+ LYA G
Sbjct: 1 MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
IEDA F+++ KD V WN MI G G +D + LF+ MM KPD T +L
Sbjct: 61 IEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSI 120
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC 301
S + Q+H L+++ GL+ + +L+ VY+K + A +L+ M + D++
Sbjct: 121 SCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVW 180
Query: 302 TALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF 361
+I G+ + + +A LF +MI + D + L A +SL ++IH +
Sbjct: 181 NRMIGGYVQ-NGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIV 239
Query: 362 KYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIE 421
++ D + +ALID+Y K + A + F+ +++ +T++I+GY +G +A+E
Sbjct: 240 RHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALE 299
Query: 422 LYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLF 481
+++ + + M+PN +TF S+L AC+ G EL +I K + + S +++++
Sbjct: 300 IFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYII-KNELEEKCPVGSAIMNMY 358
Query: 482 ARRGQLESAYNMIRQMNIKPTASLWSAIL 510
A+ G+L+ A+ + +++IK A W++I+
Sbjct: 359 AKCGRLDLAHLIFGRISIK-DAICWNSII 386
>gi|218191314|gb|EEC73741.1| hypothetical protein OsI_08374 [Oryza sativa Indica Group]
Length = 667
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 194/555 (34%), Positives = 302/555 (54%), Gaps = 6/555 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
D T+ + C + R +H + G+ + ++ +I Y GDV +A
Sbjct: 106 FDHLTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAV 165
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F M R VVSW A+I+G +NGY E AL VF M GV ++ T S L ACA+ + L
Sbjct: 166 FGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDL 225
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER-KDVVSWNAMIGG 206
GR + ++ + + VK+AL+D+Y KC +EDA +F+ + KDVVSW AMIG
Sbjct: 226 NTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGA 285
Query: 207 LAMQGFNDDSFWLFRSMMRQGMK-PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
+ ++ L M+ G P+ T+ +L A H L I+LGL+S
Sbjct: 286 YVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKS 345
Query: 266 SNKLTGSLIDVYAKYGSIR-SAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ +LID YA+ G ++ L R + + + A +SG+ K+A +LFK
Sbjct: 346 DIAVETALIDAYARCGKMKLMRLTLERGSWRAE--TWNAALSGYTVS-GREKKAIELFKR 402
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
MI + + D + +L A A L G+ IH F + LID+Y+K+G+
Sbjct: 403 MIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGD 462
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ A F + +K+V++WT++IAGY+ HG+ AI LY +M G PN VT +LL+A
Sbjct: 463 LDAAWALFQWLPEKDVVAWTTIIAGYSIHGHARTAILLYDRMVESGGKPNTVTIATLLYA 522
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
CSH G+ EG ++F DM N + ++P EH+SC+VD+ R G++E A+ +I+ M +P+ S
Sbjct: 523 CSHAGMIDEGIKVFKDMRNVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTS 582
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
+W A+LGAC ++ N GE+AA+ LF ++PE + +YV+L NIY AA W + + R++M
Sbjct: 583 VWGALLGACVLHKNVEFGEVAAKRLFQLDPENTGSYVLLGNIYAAADRWRDVQDVRRMMV 642
Query: 565 ERSLRKNPGYSFLQS 579
ER L K PG S +++
Sbjct: 643 ERGLLKEPGSSLVEA 657
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 140/515 (27%), Positives = 243/515 (47%), Gaps = 22/515 (4%)
Query: 58 TNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWT-AMISGYAQNGYDENAL 116
T+G+ H + + Y G SA +MP+ VS++ +++ Y G AL
Sbjct: 38 TSGHLLRYHGLHPLFMVYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREAL 97
Query: 117 LVFSAMLRSGVRA-NQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDL 175
V+SAM RA + T+ A +ACA +R + GR + F + +V++AL+ +
Sbjct: 98 AVYSAM-----RAFDHLTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISM 152
Query: 176 YAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTL 235
Y CG + A +F + + VVSWNA+I G G+ + + +F M G+ D T+
Sbjct: 153 YMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATV 212
Query: 236 GSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY-RSML 294
S+L A +L +H L+ GL + +LID+Y K S+ A +++
Sbjct: 213 VSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKH 272
Query: 295 KTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG-IDDVILCLMLNICANVASLNLG 353
D++S TA+I + +D + EA L M++ + V + +L+ CA++ S
Sbjct: 273 DKDVVSWTAMIGAYVLNDR-AFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHA 331
Query: 354 RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKH 413
+ HA + D AV ALID YA+ G++ R E G +W + ++GY
Sbjct: 332 KCTHALCIRLGLKSDIAVETALIDAYARCGKM-KLMRLTLERGSWRAETWNAALSGYTVS 390
Query: 414 GYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEH 473
G +AIEL+K+M E + P+ T S+L A + + EG + ++ L E
Sbjct: 391 GREKKAIELFKRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLT-LGFLRSTEI 449
Query: 474 FSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD-- 531
+ ++D++++ G L++A+ + + + K + W+ I+ SI+G+ L L+D
Sbjct: 450 ATGLIDVYSKAGDLDAAWALFQWLPEKDVVA-WTTIIAGYSIHGHARTAIL----LYDRM 504
Query: 532 MEPEKSVNYVVLSNIYTA---AGAWDNARKTRKLM 563
+E N V ++ + A AG D K K M
Sbjct: 505 VESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDM 539
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 199/421 (47%), Gaps = 16/421 (3%)
Query: 3 IVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
++ K G ++AL+ ++ +D +T +S+L C K +H + G
Sbjct: 180 VIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDKG 239
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMP-ERNVVSWTAMISGYAQNGYDENALLVF 119
+ + +I Y K + AR+ FD +++VVSWTAMI Y N A+ +
Sbjct: 240 LGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVLNDRAFEAISLG 299
Query: 120 SAMLRSGVR-ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
ML SG N T L ACA M + + + ++ V++AL+D YA+
Sbjct: 300 CQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYAR 359
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
CG ++ + ER + +WNA + G + G + LF+ M+ + ++PD T+ SI
Sbjct: 360 CGKMKLMRLTLERGSWR-AETWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASI 418
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
L A +L + IH ++ LG S ++ LIDVY+K G + +A+ L++ + + D+
Sbjct: 419 LPAYAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDV 478
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
++ T +I+G++ H++ A L+ M+ + V + +L C++ ++ G ++
Sbjct: 479 VAWTTIIAGYS-IHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKV-- 535
Query: 359 FAFKYQSSYDAAVGNA-----LIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAK 412
FK + + N L+DM ++G I +A+R +M + + W +L+
Sbjct: 536 --FKDMRNVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVL 593
Query: 413 H 413
H
Sbjct: 594 H 594
>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g09040, mitochondrial; Flags: Precursor
gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1028
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 190/559 (33%), Positives = 307/559 (54%), Gaps = 5/559 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D T+ SLL C H+ II NL + ++ YAK G + AR+
Sbjct: 426 IDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQI 485
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F+RM +R+ V+W +I Y Q+ + A +F M G+ ++ +S L+AC + L
Sbjct: 486 FERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGL 545
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ + K +L S+L+D+Y+KCG I+DA +F + VVS NA+I G
Sbjct: 546 YQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGY 605
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
+ +++ LF+ M+ +G+ P T +I+ A L +Q H I K G S
Sbjct: 606 SQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEG 664
Query: 268 KLTG-SLIDVYAKYGSIRSAYQLYRSMLKT-DIISCTALISGFARDDNHSKEAFDLFKDM 325
+ G SL+ +Y + A L+ + I+ T ++SG +++ + +EA +K+M
Sbjct: 665 EYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFY-EEALKFYKEM 723
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ D +L +C+ ++SL GR IH+ F D N LIDMYAK G++
Sbjct: 724 RHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDM 783
Query: 386 ADANRAFDEMGDK-NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+++ FDEM + NV+SW SLI GYAK+GY +A++++ M+ ++P+++TFL +L A
Sbjct: 784 KGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTA 843
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
CSH G +G ++F MI +Y I R +H +C+VDL R G L+ A + I N+KP A
Sbjct: 844 CSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDAR 903
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
LWS++LGAC I+G+ GE++A L ++EP+ S YV+LSNIY + G W+ A RK+M
Sbjct: 904 LWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMR 963
Query: 565 ERSLRKNPGYSFLQSSKKN 583
+R ++K PGYS++ ++
Sbjct: 964 DRGVKKVPGYSWIDVEQRT 982
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 155/520 (29%), Positives = 278/520 (53%), Gaps = 14/520 (2%)
Query: 51 LIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
++HA I G SN+++ + ++ Y+K + +A K F+ + E+N V W AMI GYA NG
Sbjct: 348 VVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNG 407
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
+ +F M SG + FT++S L CA L+ G I K + +NLFV +
Sbjct: 408 ESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGN 467
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
AL+D+YAKCG +EDA +FER+ +D V+WN +IG ++F LF+ M G+
Sbjct: 468 ALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVS 527
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
D L S L+A L + Q+H L +K GL+ SLID+Y+K G I+ A +++
Sbjct: 528 DGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVF 587
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
S+ + ++S ALI+G+++ N+ +EA LF++M+ + + ++ ++ C SL
Sbjct: 588 SSLPEWSVVSMNALIAGYSQ--NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESL 645
Query: 351 NLGRQIHAFAFKYQ-SSYDAAVGNALIDMYAKSGEIADANRAFDEMGD-KNVISWTSLIA 408
LG Q H K SS +G +L+ MY S + +A F E+ K+++ WT +++
Sbjct: 646 TLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMS 705
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
G++++G+ EA++ YK+M+H+G++P+ TF+++L CS EG + + + + L
Sbjct: 706 GHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDL 765
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARN 528
+ ++D++A+ G ++ + + +M + W++++ Y E A +
Sbjct: 766 DELTS-NTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLING---YAKNGYAEDALK- 820
Query: 529 LFDMEPEKSV--NYVVLSNIYTA---AGAWDNARKTRKLM 563
+FD + + + + + TA AG + RK ++M
Sbjct: 821 IFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMM 860
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 147/494 (29%), Positives = 245/494 (49%), Gaps = 6/494 (1%)
Query: 27 LLDPST--YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
++DP+T + L + +A L+ + G+ + VI Y ++G + A
Sbjct: 221 IVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDA 280
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
R F M +VV+W MISG+ + G + A+ F M +S V++ + T S L A +
Sbjct: 281 RLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIV 340
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
L G ++ K N++V S+L+ +Y+KC +E A +FE +E K+ V WNAMI
Sbjct: 341 ANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMI 400
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G A G + LF M G D FT S+L +L SQ H +IIK L
Sbjct: 401 RGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLA 460
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ + +L+D+YAK G++ A Q++ M D ++ +I + +D+N S EAFDLFK
Sbjct: 461 KNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENES-EAFDLFKR 519
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M L + D L L C +V L G+Q+H + K D G++LIDMY+K G
Sbjct: 520 MNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGI 579
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
I DA + F + + +V+S +LIAGY+++ EA+ L+++M G+ P+++TF +++ A
Sbjct: 580 IKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEA 638
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFS-CVVDLFARRGQLESAYNMIRQMNIKPTA 503
C G + F I K E+ ++ ++ + A + +++ +
Sbjct: 639 CHKPESLTLGTQ-FHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSI 697
Query: 504 SLWSAILGACSIYG 517
LW+ ++ S G
Sbjct: 698 VLWTGMMSGHSQNG 711
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 201/419 (47%), Gaps = 40/419 (9%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ +L C + IH +I G E N + ++ YAK + AR+ F+ +
Sbjct: 162 TFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWI 221
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
+ N V WT + SGY + G E A+LVF M G R + + +
Sbjct: 222 VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVT--------------- 266
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+++ Y + G ++DA +LF + DVV+WN MI G +G
Sbjct: 267 --------------------VINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRG 306
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGLESSNKL 269
+ F +M + +K TLGS+L A V ++L + +H IKLGL S+ +
Sbjct: 307 CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLV--VHAEAIKLGLASNIYV 364
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
SL+ +Y+K + +A +++ ++ + + + A+I G+A + S + +LF DM
Sbjct: 365 GSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAH-NGESHKVMELFMDMKSSG 423
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
IDD +L+ CA L +G Q H+ K + + + VGNAL+DMYAK G + DA
Sbjct: 424 YNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDAR 483
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ F+ M D++ ++W ++I Y + EA +L+K+M G+V + S L AC+H
Sbjct: 484 QIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHV 542
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 127/468 (27%), Positives = 219/468 (46%), Gaps = 39/468 (8%)
Query: 45 AERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMIS 104
A R +H+ + G +S L ++ YAK V A K FD + E++V +W +M+S
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 105 GYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVE 164
Y+ G L F ++ + + N+FT+S L CAR ++ GR I S+ K
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 165 NLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMM 224
N + AL+D+YAKC I DA +FE I + V W + G G +++ +F M
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 225 RQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIR 284
+G +PD ++ I+ Y + G ++
Sbjct: 254 DEGHRPDHLAFVTV-----------------------------------INTYIRLGKLK 278
Query: 285 SAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNIC 344
A L+ M D+++ +ISG + + A + F +M + L +L+
Sbjct: 279 DARLLFGEMSSPDVVAWNVMISGHGKRGCETV-AIEYFFNMRKSSVKSTRSTLGSVLSAI 337
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWT 404
VA+L+LG +HA A K + + VG++L+ MY+K ++ A + F+ + +KN + W
Sbjct: 338 GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWN 397
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK 464
++I GYA +G H+ +EL+ MK G +D TF SLL C+ + E F +I K
Sbjct: 398 AMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASH-DLEMGSQFHSIIIK 456
Query: 465 YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
++ + +VD++A+ G LE A + +M + + W+ I+G+
Sbjct: 457 KKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVT-WNTIIGS 503
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 158/323 (48%), Gaps = 21/323 (6%)
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN 313
+H + LG++S +L +++D+YAK + A + + L+ D+ + +++S ++
Sbjct: 82 VHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLSMYSSIGK 140
Query: 314 HSK---EAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA 370
K LF++ I + ++L+ CA ++ GRQIH K ++
Sbjct: 141 PGKVLRSFVSLFENQIFP----NKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSY 196
Query: 371 VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG 430
G AL+DMYAK I+DA R F+ + D N + WT L +GY K G EA+ ++++M+ EG
Sbjct: 197 CGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEG 256
Query: 431 MVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRG----Q 486
P+ + F++++ G + LF +M + P ++ ++ +RG
Sbjct: 257 HRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGKRGCETVA 311
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYV--VLS 544
+E +NM R+ ++K T S ++L A I N LG + + ++ YV L
Sbjct: 312 IEYFFNM-RKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNI-YVGSSLV 369
Query: 545 NIYTAAGAWDNARKTRKLMEERS 567
++Y+ + A K + +EE++
Sbjct: 370 SMYSKCEKMEAAAKVFEALEEKN 392
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 113/211 (53%), Gaps = 11/211 (5%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ G ++ALKF + L D +T++++L+ C + R+ IH+ I ++ +
Sbjct: 709 QNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDEL 768
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPER-NVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
S +I YAK GD+ + + FD M R NVVSW ++I+GYA+NGY E+AL +F +M +S
Sbjct: 769 TSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQS 828
Query: 126 GVRANQFTYSSALRACARMRWLQGGR----MIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
+ ++ T+ L AC+ + GR M+ G V+++ + ++DL + G+
Sbjct: 829 HIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHV---ACMVDLLGRWGY 885
Query: 182 IEDAWILFERIERK-DVVSWNAMIGGLAMQG 211
+++A E K D W++++G + G
Sbjct: 886 LQEADDFIEAQNLKPDARLWSSLLGACRIHG 916
>gi|115461454|ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza sativa Japonica Group]
gi|113565898|dbj|BAF16241.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|215766744|dbj|BAG98972.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629815|gb|EEE61947.1| hypothetical protein OsJ_16704 [Oryza sativa Japonica Group]
Length = 690
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 188/534 (35%), Positives = 302/534 (56%), Gaps = 6/534 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HA ++ G+ S+ L+ +I YAK G + A + FD MPERNVVSWTA++ G+ +G
Sbjct: 26 LHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGE 85
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
L +F M SG N+FT S+ L+AC + G I G + F + V ++
Sbjct: 86 ARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQIHGVCVRTGFEGHDVVANS 143
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ-GMKP 230
L+ +Y+K W DA +F+ I +++ +WN+MI G A G DS +FR M R+ +P
Sbjct: 144 LVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQP 203
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK--LTGSLIDVYAKYGSIRSAYQ 288
D FT S+L+A G + +Q+H + G+ ++ L G+L+DVY K + A Q
Sbjct: 204 DEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQ 263
Query: 289 LYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
++ + + + I T +I G A++ KEA LF+ + D +L ++ + A+ A
Sbjct: 264 VFDGLERRNAIQWTTVIVGHAQE-GQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFA 322
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA 408
+ G+Q+H + K + D +V N+L+DMY K G +A R F EM +NV+SWT++I
Sbjct: 323 LVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMIN 382
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
G KHG+G EAI+L+++M+ EG+ ++V +L+LL ACSH+GL E F+ + R+
Sbjct: 383 GVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMR 442
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARN 528
P+AEH++C+VDL R G+L A +I M ++PT +W +L AC ++ + ++G
Sbjct: 443 PKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDV 502
Query: 529 LFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
L ++ + VNYV+LSNI AG W + R M + LRK G S+ + K+
Sbjct: 503 LLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDKE 556
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 214/441 (48%), Gaps = 18/441 (4%)
Query: 138 LRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDV 197
LRA AR L+GG + ++ K F + + + L+D+YAKCG + A +F+ + ++V
Sbjct: 11 LRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNV 70
Query: 198 VSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDL 257
VSW A++ G G + LF M G P+ FTL + L+A GG QIH +
Sbjct: 71 VSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAG--VQIHGV 128
Query: 258 IIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKE 317
++ G E + + SL+ +Y+K A +++ + ++ + ++ISG+A ++
Sbjct: 129 CVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAH-AGQGRD 187
Query: 318 AFDLFKDMILKK-MGIDDVILCLMLNICANVASLNLGRQIH-AFAFKYQS-SYDAAVGNA 374
+ +F++M + D+ +L C+ + + G Q+H A A + S + +A + A
Sbjct: 188 SLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGA 247
Query: 375 LIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
L+D+Y K + A + FD + +N I WT++I G+A+ G EA+ L+++ G+ +
Sbjct: 248 LLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRAD 307
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI 494
S++ + L +G ++ L + S +VD++ + G A
Sbjct: 308 GHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANS-LVDMYLKCGLTGEAGRRF 366
Query: 495 RQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVN-----YVVLSNIYTA 549
R+M + S W+A++ +G+ A +LF+ E+ V Y+ L + +
Sbjct: 367 REMPARNVVS-WTAMINGVGKHGHGR----EAIDLFEEMQEEGVEADEVAYLALLSACSH 421
Query: 550 AGAWDNARKT-RKLMEERSLR 569
+G D R+ ++ ++R +R
Sbjct: 422 SGLVDECRRYFSRICQDRRMR 442
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 116/228 (50%), Gaps = 4/228 (1%)
Query: 235 LGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML 294
+ +LRAS G L Q+H ++KLG S L +LID+YAK G + A +++ M
Sbjct: 7 IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP 66
Query: 295 KTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGR 354
+ +++S TAL+ GF ++E LF +M ++ L L C G
Sbjct: 67 ERNVVSWTALMVGFLH-HGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGV 123
Query: 355 QIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG 414
QIH + V N+L+ MY+K DA R FD + +N+ +W S+I+GYA G
Sbjct: 124 QIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAG 183
Query: 415 YGHEAIELYKKM-KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM 461
G +++ ++++M + P++ TF SLL ACS G EG ++ M
Sbjct: 184 QGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAM 231
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 3/272 (1%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYE--SNLHLSTKVIIFYAKVGDVL 82
D D T+ SLL+ C A R+ +HA + G SN L+ ++ Y K +
Sbjct: 200 DEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLP 259
Query: 83 SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA 142
A + FD + RN + WT +I G+AQ G + A+ +F SGVRA+ SS + A
Sbjct: 260 VAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFA 319
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
++ G+ + K ++ V ++L+D+Y KCG +A F + ++VVSW A
Sbjct: 320 DFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTA 379
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKL 261
MI G+ G ++ LF M +G++ D ++L A S G+ +
Sbjct: 380 MINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDR 439
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ + ++D+ + G +R A +L SM
Sbjct: 440 RMRPKAEHYACMVDLLGRAGELREAKELILSM 471
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 6/145 (4%)
Query: 2 NIVRANFKTGQLKQAL----KFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHII 57
++ + + GQ+K+A+ +F S D S++ D Q +H +
Sbjct: 278 TVIVGHAQEGQVKEAMCLFRRFWSS--GVRADGHVLSSVVAVFADFALVEQGKQVHCYTA 335
Query: 58 TNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALL 117
++ ++ ++ Y K G A + F MP RNVVSWTAMI+G ++G+ A+
Sbjct: 336 KTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAID 395
Query: 118 VFSAMLRSGVRANQFTYSSALRACA 142
+F M GV A++ Y + L AC+
Sbjct: 396 LFEEMQEEGVEADEVAYLALLSACS 420
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 183/537 (34%), Positives = 309/537 (57%), Gaps = 4/537 (0%)
Query: 42 DKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTA 101
D A +QAH + + G ++++ + ++ Y K G V ARK FDRMPERN VSW
Sbjct: 133 DVVAGKQAHSV---AVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWAT 189
Query: 102 MISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGR 161
MISGYA + + A+ VF M R N+F +S L A ++ GR + K
Sbjct: 190 MISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNG 249
Query: 162 FVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFR 221
+ + V +AL+ +YAKCG ++DA FE K+ ++W+AM+ G A G +D + LF
Sbjct: 250 LLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFN 309
Query: 222 SMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYG 281
M G+ P FTL ++ A +++ Q+H KLG + +++D+YAK G
Sbjct: 310 KMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCG 369
Query: 282 SIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLML 341
S+ A + + + + D++ T++I+G+ ++ ++ + +L+ M ++++ +++ + +L
Sbjct: 370 SLADARKGFECVQQPDVVLWTSIITGYVQNGDY-EGGLNLYGKMQMERVIPNELTMASVL 428
Query: 342 NICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVI 401
C+++A+L+ G+Q+HA KY + +G+AL MY K G + D F M ++VI
Sbjct: 429 RACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVI 488
Query: 402 SWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM 461
SW ++I+G +++G+G++A+EL++KM EG+ P+ VTF++LL ACSH GL GWE F M
Sbjct: 489 SWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMM 548
Query: 462 INKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSL 521
+++ I P EH++C+VD+ +R G+L A I + LW +LGAC + N L
Sbjct: 549 FDEFNIAPMVEHYACMVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYEL 608
Query: 522 GELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
G A L ++ +S YV+LS+IYTA G +N + R++M+ R + K PG S+++
Sbjct: 609 GVYAGEKLVELGSPESSAYVLLSSIYTALGDRENVERVRRIMKARGVNKEPGCSWIE 665
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 153/545 (28%), Positives = 276/545 (50%), Gaps = 15/545 (2%)
Query: 30 PSTYMSLLQ---FCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
P + LLQ C K + +HA I+ G S+++++ + YAK + A
Sbjct: 8 PPQHRQLLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALT 67
Query: 87 AFDRMPE--RNVVSWTAMISGYAQNGYDEN---ALLVFSAMLRSG-VRANQFTYSSALRA 140
FD + + ++ VSW ++I+ ++QN + A+ +F M+R+ V N T + A
Sbjct: 68 LFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSA 127
Query: 141 CARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSW 200
+ + + G+ K +++V S+LL++Y K G++ DA LF+R+ ++ VSW
Sbjct: 128 ASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSW 187
Query: 201 NAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIK 260
MI G A D + +F M R+ + F L S+L A + + Q+H L IK
Sbjct: 188 ATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIK 247
Query: 261 LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFD 320
GL + + +L+ +YAK GS+ A + + + I+ +A+++G+A+ + S +A
Sbjct: 248 NGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGD-SDKALK 306
Query: 321 LFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYA 380
LF M + + L ++N C+++ ++ G+Q+H+FAFK V +A++DMYA
Sbjct: 307 LFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYA 366
Query: 381 KSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
K G +ADA + F+ + +V+ WTS+I GY ++G + LY KM+ E ++PN++T S
Sbjct: 367 KCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMAS 426
Query: 441 LLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIK 500
+L ACS +G ++ +I KY S + ++ + G L+ Y + +M +
Sbjct: 427 VLRACSSLAALDQGKQMHARII-KYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSR 485
Query: 501 PTASLWSAILGACSI--YGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARK 558
S W+A++ S +GN +L EL + L + V +V L + + G D +
Sbjct: 486 DVIS-WNAMISGLSQNGHGNKAL-ELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWE 543
Query: 559 TRKLM 563
K+M
Sbjct: 544 YFKMM 548
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 129/235 (54%), Gaps = 2/235 (0%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ G +ALK + + PS T + ++ C D A + +H+ G+ L+
Sbjct: 297 QGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLY 356
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ + V+ YAK G + ARK F+ + + +VV WT++I+GY QNG E L ++ M
Sbjct: 357 VLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMER 416
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
V N+ T +S LRAC+ + L G+ + I K F + + SAL +Y KCG ++D +
Sbjct: 417 VIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGY 476
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
++F R+ +DV+SWNAMI GL+ G + + LF M+ +G+KPD T ++L A
Sbjct: 477 LIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSA 531
>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 840
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 185/553 (33%), Positives = 306/553 (55%), Gaps = 41/553 (7%)
Query: 30 PSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
PS Y S+L+ C +IH + I E+N+ ++T ++ Y+K +L A
Sbjct: 132 PSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYL 191
Query: 88 FDRMPER-NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
F +P+R N V WTAM++GYAQNG A+ F M G+ +N FT+ S L AC +
Sbjct: 192 FFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISA 251
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
GR + G I F N++V+SAL+D+YAKCG + A ++ + +E DVV WN+MI G
Sbjct: 252 YAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVG 311
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLES 265
G+ +++ LF M + ++ D FT S+L+ S+ + +KI + +H L IK G ++
Sbjct: 312 CVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLK-SLASCKNLKIGESVHSLTIKTGFDA 370
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
++ +L+D+YAK G++ A ++ +L D+IS T+L++G+ + H K A LF DM
Sbjct: 371 CKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEK-ALQLFCDM 429
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
++ +D ++ + + CA + + GRQ+HA K + + N+LI MYAK G +
Sbjct: 430 RTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCL 489
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
DA R D M +NVISWT++I GYA++
Sbjct: 490 EDAIRVXDSMETRNVISWTAIIVGYAQN-------------------------------- 517
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
GL G F M Y I P ++ ++C++DL R G++ A +++ +M+++P A++
Sbjct: 518 ---GLVETGQSYFESMEKVYGIKPASDRYACMIDLLGRAGKINEAEHLLNRMDVEPDATI 574
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
W ++L AC ++GN LGE A +NL +EP S+ YV+LSN+++ AG W++A R+ M+
Sbjct: 575 WKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKT 634
Query: 566 RSLRKNPGYSFLQ 578
+ + PGYS+++
Sbjct: 635 MGIXQEPGYSWIE 647
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 186/389 (47%), Gaps = 37/389 (9%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
D +D TY S+L+ K + +H+ I G+++ +S ++ YAK G++ A
Sbjct: 332 DIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCA 391
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
F+++ +++V+SWT++++GY NG+ E AL +F M + V +QF + ACA +
Sbjct: 392 LDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAEL 451
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
++ GR + + K L +++L+ +YAKCG +EDA + + +E ++V+SW A+I
Sbjct: 452 TVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVXDSMETRNVISWTAII 511
Query: 205 GGLAMQGFNDDSFWLFRSMMR-QGMKP--DCFTLGSILRASVGGIELMKISQIHDLIIKL 261
G A G + F SM + G+KP D + L G KI++ L+ ++
Sbjct: 512 VGYAQNGLVETGQSYFESMEKVYGIKPASDRYACMIDLLGRAG-----KINEAEHLLNRM 566
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD--------IISCTALISGFARDDN 313
+E + SL+ +G++ + ++++K + ++S ++G D
Sbjct: 567 DVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAA 626
Query: 314 HSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN 373
H + A +K MGI + + + Q+H F + +S AA
Sbjct: 627 HIRRA--------MKTMGIXQE---------PGYSWIEMKSQVHTFISEDRSHPLAAEIY 669
Query: 374 ALID----MYAKSGEIADANRAFDEMGDK 398
+ ID + ++G + D N A +M ++
Sbjct: 670 SKIDEMMILIKEAGHVPDMNFALRDMDEE 698
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 9/147 (6%)
Query: 368 DAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMK 427
D N +I YA G + +A + F+E N I+W+SL++GY K+G E + + +M
Sbjct: 67 DKYTWNIMISAYANLGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGLRQFSQMW 126
Query: 428 HEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEH----FSCVVDLFAR 483
+G P+ T S+L ACS L G MI+ Y I + E + +VD++++
Sbjct: 127 SDGQKPSQYTLGSVLRACSTLSLLHTG-----KMIHCYAIKIQLEANIFVATGLVDMYSK 181
Query: 484 RGQLESAYNMIRQMNIKPTASLWSAIL 510
L A + + + W+A+L
Sbjct: 182 CKCLLEAEYLFFSLPDRKNYVQWTAML 208
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 190/572 (33%), Positives = 309/572 (54%), Gaps = 3/572 (0%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K G A+K L + + P+ T+ +L C + +H + G E +
Sbjct: 136 KNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSP 195
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
++ ++ Y+K + +ARK FD +P+ ++VSW +ISGY QNG A +F M+ +G
Sbjct: 196 VANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAG 255
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
++ + T++S L + L+ + I G I + V ++F+KSAL+D+Y KC +E A
Sbjct: 256 IKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQ 315
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+ D V MI G + G N ++ FR ++++ MKP T SI A G
Sbjct: 316 KNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLA 375
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
L ++H IIK L+ + +++D+YAK G + A +++ + + D I ++I+
Sbjct: 376 ALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMIT 435
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
+++ EA +LF+ M ++ D V + L+ CAN+ +L+ G++IH K
Sbjct: 436 SCSQN-GRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLR 494
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
D ++LIDMYAK G + + R FD M +KN +SW S+I+ Y HG E + L+ +M
Sbjct: 495 SDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEM 554
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
G+ P+ VTFL ++ AC H G EG + M +Y I R EH++CV D+F R G+
Sbjct: 555 LRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGR 614
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
L A+ I M P A +W +LGAC I+GN L E+A+++LFD++P S YV+L+N+
Sbjct: 615 LHEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANV 674
Query: 547 YTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
AG W K R +M+ER +RK PGYS+++
Sbjct: 675 QAGAGKWRKVLKVRSIMKERGVRKVPGYSWIE 706
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 154/520 (29%), Positives = 262/520 (50%), Gaps = 12/520 (2%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNG 60
++R GQ AL F L + P T+ +++ C K+ + ++H + G
Sbjct: 29 MIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPYVVKACCGLKSVKMGKIVHETVNLMG 88
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+ ++ + + +I YA+ G + A+ FD +P+++ V W M++GY +NG NA+ +F
Sbjct: 89 LKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFL 148
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVE-NLFVKSALLDLYAKC 179
M S ++ N T++ L CA L G + G I G +E + V + LL +Y+KC
Sbjct: 149 EMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHG-IAVGCGLELDSPVANTLLAMYSKC 207
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
++ A LF+ + + D+VSWN +I G G ++ LFR M+ G+KPD T S L
Sbjct: 208 QCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFL 267
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
+ L +IH II+ + L +LID+Y K + A + D +
Sbjct: 268 PCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTV 327
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
CT +ISG+ + +KEA + F+ ++ ++M V + A +A+LNLG+++H
Sbjct: 328 VCTTMISGYVLNGK-NKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGS 386
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
K + VG+A++DMYAK G + A R F+ + +K+ I W S+I +++G EA
Sbjct: 387 IIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEA 446
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI-NKYRILPRAEHFSCVV 478
I L+++M EG + V+ L AC++ G E+ MI R AE S ++
Sbjct: 447 INLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAE--SSLI 504
Query: 479 DLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
D++A+ G L + + +M K S W++I+ A YGN
Sbjct: 505 DMYAKCGNLNFSRRVFDRMQEKNEVS-WNSIISA---YGN 540
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/456 (26%), Positives = 234/456 (51%), Gaps = 7/456 (1%)
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
Y + G + A+ F + +W MI G+ G ALL + ML +GV +++T+
Sbjct: 2 YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTF 61
Query: 135 SSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER 194
++AC ++ ++ G+++ ++ E++FV S+L+ LYA+ G + DA LF+ I +
Sbjct: 62 PYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQ 121
Query: 195 KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQI 254
KD V WN M+ G G + ++ +F M +KP+ T +L L +Q+
Sbjct: 122 KDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQL 181
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH 314
H + + GLE + + +L+ +Y+K +++A +L+ ++ ++D++S +ISG+ + +
Sbjct: 182 HGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQ-NGL 240
Query: 315 SKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNA 374
EA LF+ MI + D + L + SL ++IH + ++ D + +A
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSA 300
Query: 375 LIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
LID+Y K ++ A + + + + T++I+GY +G EA+E ++ + E M P
Sbjct: 301 LIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPT 360
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI 494
VTF S+ A + G EL +I K ++ + S ++D++A+ G+L+ A +
Sbjct: 361 SVTFSSIFPAFAGLAALNLGKELHGSII-KTKLDEKCHVGSAILDMYAKCGRLDLACRVF 419
Query: 495 RQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
++ K A W++++ +CS G GE A NLF
Sbjct: 420 NRITEK-DAICWNSMITSCSQNGRP--GE--AINLF 450
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 145/270 (53%), Gaps = 5/270 (1%)
Query: 175 LYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFT 234
+Y + G ++DA LF ++ +WN MI G M G + + + M+ G+ PD +T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 235 LGSILRASVG--GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRS 292
+++A G +++ KI +H+ + +GL+ + SLI +YA+ G + A L+ +
Sbjct: 61 FPYVVKACCGLKSVKMGKI--VHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDN 118
Query: 293 MLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNL 352
+ + D + +++G+ ++ + S A +F +M ++ + V +L++CA+ A L+L
Sbjct: 119 IPQKDSVLWNVMLNGYVKNGD-SGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDL 177
Query: 353 GRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAK 412
G Q+H A D+ V N L+ MY+K + A + FD + +++SW +I+GY +
Sbjct: 178 GTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQ 237
Query: 413 HGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
+G EA L++ M G+ P+ +TF S L
Sbjct: 238 NGLMGEAEHLFRGMISAGIKPDSITFASFL 267
>gi|224106429|ref|XP_002314162.1| predicted protein [Populus trichocarpa]
gi|222850570|gb|EEE88117.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 186/553 (33%), Positives = 313/553 (56%), Gaps = 3/553 (0%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
+L +P ++ FC + H+ I+ G+ SN+++ + V+ YAK G++ SAR
Sbjct: 65 SLSNPYFLNKIVSFCAKSGSFHLGIQAHSTILKLGFISNVYICSAVVDMYAKCGEISSAR 124
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
FD+MP+R VV+W ++I GY + A+ +F ML++ + + F+ SS L C+++
Sbjct: 125 VLFDQMPQRTVVTWNSLIYGYLAVNCPKIAIELFIKMLKAAINVSAFSVSSCLAGCSQLE 184
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
+ G + G I K N+ V ++L+D+Y+KCG ++D+ ++F+ + ++V++W +M+
Sbjct: 185 AREVGTQVHGLILKTGLGYNVVVGTSLVDMYSKCGDVDDSRLVFDHMVNRNVITWTSMVT 244
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
G + D++ L + M+ Q ++P+C T S+L + G L Q+H II+LGLES
Sbjct: 245 GYSQIEKPDEAMALVKEMVLQDLRPNCVTYNSLLSSFSGPDCLSYCLQVHCCIIQLGLES 304
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT-DIISCTALISGFARDDNHSKEAFDLFKD 324
+ + +L+ VY+K S ++ S++ T D I+ A+I+G+++ H +EA F +
Sbjct: 305 NVYIAATLVTVYSKCSSSLEDFKKVCSVVMTCDNIAWNAVIAGYSKLGRH-EEALRCFHE 363
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M + ID L ++ N + L G+ +HA + V N L+ MYA+ G
Sbjct: 364 MKQAGIDIDSYTLTSVVGAIGNSSFLEEGKAMHALIHRTGYISHLNVQNGLVSMYARCGA 423
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
I D+ R F M + +VISW +L+ +A HGYG EA+EL+++M+ + PN TFL++L A
Sbjct: 424 IGDSKRVFWFMEEHDVISWNALLTAFAHHGYGREAVELFEQMRKTEIKPNSSTFLAVLCA 483
Query: 445 CSHTGLTCEGWELFTDMINKYRILP-RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
CSH G +G E F M + + P + EH++ +VD F R G L A I M I P
Sbjct: 484 CSHVGFVDKGIEYFDTMKSDILLEPLKVEHYASLVDTFGRAGYLNEAEAFINSMPIVPAP 543
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
S++ A+L A ++GN + +A+ L ++ P YV+LS++ T G WD+A RKLM
Sbjct: 544 SVYKALLSASLVHGNREIAARSAKKLLELWPNDPATYVLLSSVLTVDGNWDDAADLRKLM 603
Query: 564 EERSLRKNPGYSF 576
+R LRK PGYS+
Sbjct: 604 CDRGLRKKPGYSW 616
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 114/477 (23%), Positives = 224/477 (46%), Gaps = 50/477 (10%)
Query: 124 RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIE 183
R G +N + + + CA+ G +I K F+ N+++ SA++D+YAKCG I
Sbjct: 62 RHGSLSNPYFLNKIVSFCAKSGSFHLGIQAHSTILKLGFISNVYICSAVVDMYAKCGEIS 121
Query: 184 DAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV 243
A +LF+++ ++ VV+WN++I G + LF M++ + F++ S L A
Sbjct: 122 SARVLFDQMPQRTVVTWNSLIYGYLAVNCPKIAIELFIKMLKAAINVSAFSVSSCL-AGC 180
Query: 244 GGIELMKI-SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCT 302
+E ++ +Q+H LI+K GL + + SL+D+Y+K G + + ++ M+ ++I+ T
Sbjct: 181 SQLEAREVGTQVHGLILKTGLGYNVVVGTSLVDMYSKCGDVDDSRLVFDHMVNRNVITWT 240
Query: 303 ALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK 362
++++G+++ + EA L K+M+L+ + + V +L+ + L+ Q+H +
Sbjct: 241 SMVTGYSQIEK-PDEAMALVKEMVLQDLRPNCVTYNSLLSSFSGPDCLSYCLQVHCCIIQ 299
Query: 363 YQSSYDAAVGNALIDMYAK-SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIE 421
+ + L+ +Y+K S + D + + + I+W ++IAGY+K G EA+
Sbjct: 300 LGLESNVYIAATLVTVYSKCSSSLEDFKKVCSVVMTCDNIAWNAVIAGYSKLGRHEEALR 359
Query: 422 LYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLF 481
+ +MK G+ + T S++ A ++ EG + +I++ + + +V ++
Sbjct: 360 CFHEMKQAGIDIDSYTLTSVVGAIGNSSFLEEGKAMHA-LIHRTGYISHLNVQNGLVSMY 418
Query: 482 ARRGQLESA----------------------------------YNMIRQMNIKPTASLWS 507
AR G + + + +R+ IKP +S +
Sbjct: 419 ARCGAIGDSKRVFWFMEEHDVISWNALLTAFAHHGYGREAVELFEQMRKTEIKPNSSTFL 478
Query: 508 AILGACSIYGNTSLGELAARNLFD-------MEPEKSVNYVVLSNIYTAAGAWDNAR 557
A+L ACS G G FD +EP K +Y L + + AG + A
Sbjct: 479 AVLCACSHVGFVDKG----IEYFDTMKSDILLEPLKVEHYASLVDTFGRAGYLNEAE 531
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 178/548 (32%), Positives = 305/548 (55%), Gaps = 28/548 (5%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
S++ C + + +IH ++I GY+ + + ++ YAKVGD+ A F+++ +
Sbjct: 263 SMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQP 322
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
++VSW A+I+G + + E AL + M R +
Sbjct: 323 DIVSWNAVIAGCVLHEHHEQALELLGQM---------------------------KRQLH 355
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND 214
S+ K +LFV L+D+Y+KC +EDA + F + KD+++WNA+I G + +
Sbjct: 356 SSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDM 415
Query: 215 DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLI 274
++ LF M ++G+ + TL +IL+++ G + Q+H L +K G S + SLI
Sbjct: 416 EALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLI 475
Query: 275 DVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD 334
D Y K + A +++ D++S T++I+ +A+ +EA LF +M ++ D
Sbjct: 476 DSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQY-GQGEEALKLFLEMQDMELKPDR 534
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE 394
+ +LN CAN+++ G+Q+H KY D GN+L++MYAK G I DA RAF E
Sbjct: 535 FVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSE 594
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG 454
+ ++ ++SW+++I G A+HG+G +A++L+ +M EG+ PN +T +S+L AC+H GL E
Sbjct: 595 LTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEA 654
Query: 455 WELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACS 514
F M + P EH++C++DL R G++ A ++ +M + AS+W A+LGA
Sbjct: 655 KLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAAR 714
Query: 515 IYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGY 574
I+ + LG AA LF +EPEKS +V+L+NIY +AG W+N + R+LM + ++K PG
Sbjct: 715 IHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGM 774
Query: 575 SFLQSSKK 582
S+++ K
Sbjct: 775 SWIEVKDK 782
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 164/584 (28%), Positives = 276/584 (47%), Gaps = 88/584 (15%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
+Y LL C K+ R IHAHI +G + + +I Y+K ARK D
Sbjct: 58 SYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDES 117
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
E ++VSW+A+ISGYAQNG AL+ F M GV+ N+FT+SS L+AC+ ++ L+ G+
Sbjct: 118 SEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGK 177
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ G + F ++FV + L+ +YAKC D+ LF+ I ++VVSWNA+
Sbjct: 178 QVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXD 237
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
F ++ LF M+ G+KP+ F+L S++ A G + + IH +IKLG +
Sbjct: 238 FCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSAN 297
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
+L+D+YAK G + A ++ + + DI+S A+I+G ++H ++A +L M
Sbjct: 298 ALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHH-EQALELLGQM------ 350
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
RQ+H+ K D V L+DMY+K + DA A
Sbjct: 351 ---------------------KRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMA 389
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTF---------LSLL 442
F+ + +K++I+W ++I+GY+++ EA+ L+ +M EG+ N T L ++
Sbjct: 390 FNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVV 449
Query: 443 FACSHT-GLTCE-GWE----LFTDMINKYRILPRAE---------------HFSCVVDLF 481
C GL+ + G+ + +I+ Y E F+ ++ +
Sbjct: 450 HVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAY 509
Query: 482 ARRGQLESAYNM---IRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSV 538
A+ GQ E A + ++ M +KP + S++L AC+ NL E K +
Sbjct: 510 AQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACA-------------NLSAFEQGKQL 556
Query: 539 NYVVLS--------------NIYTAAGAWDNARKTRKLMEERSL 568
+ +L N+Y G+ D+A + + ER +
Sbjct: 557 HVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGI 600
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 162/328 (49%), Gaps = 1/328 (0%)
Query: 102 MISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGR 161
+I Q D + + + + +YS L C + L+ G I I K
Sbjct: 27 LIQTVPQFSEDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86
Query: 162 FVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFR 221
++ +++ L++LY+KC A L + D+VSW+A+I G A G + F
Sbjct: 87 LSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFH 146
Query: 222 SMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYG 281
M G+K + FT S+L+A +L Q+H +++ G E + +L+ +YAK
Sbjct: 147 EMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCD 206
Query: 282 SIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLML 341
+ +L+ + + +++S AL S + + D EA LF +M+L + ++ L M+
Sbjct: 207 EFLDSKRLFDEIPERNVVSWNALFSCYVQXD-FCGEAVGLFYEMVLSGIKPNEFSLSSMV 265
Query: 342 NICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVI 401
N C + + G+ IH + K +D NAL+DMYAK G++ADA F+++ +++
Sbjct: 266 NACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIV 325
Query: 402 SWTSLIAGYAKHGYGHEAIELYKKMKHE 429
SW ++IAG H + +A+EL +MK +
Sbjct: 326 SWNAVIAGCVLHEHHEQALELLGQMKRQ 353
>gi|147862014|emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
Length = 822
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 202/608 (33%), Positives = 330/608 (54%), Gaps = 44/608 (7%)
Query: 8 FKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHL 67
FKT L + L S + D ++ P + SLL C D K+ + +H HII+ G+E + L
Sbjct: 155 FKTVSLIR-LHASSASQDLIVHPIS--SLLSSCTDVKSLAEGRQLHGHIISLGFEQHPIL 211
Query: 68 STKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV 127
K++ FY+ ++ A + + W +IS Y +NG+ + AL + M++ G+
Sbjct: 212 VPKLVTFYSAFNLLVDAHVITENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGI 271
Query: 128 RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWI 187
R + FTY S L+AC L G+ + SI R +L V +AL+ +Y KCG + A
Sbjct: 272 RPDNFTYPSVLKACGEELDLGFGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARD 331
Query: 188 LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM-------------------MRQGM 228
LF++I +D VSWN+MI A G +++F LF SM +R G
Sbjct: 332 LFDKIPERDAVSWNSMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGN 391
Query: 229 KPDCFTLGSILR------------------ASVGGIELMKISQIHDLIIKLGLESSNKLT 270
L S +R + +G +L K +IH I+ + +
Sbjct: 392 YKGALELLSQMRKXGSHLDSVALIIGLGACSHIGDAKLGK--EIHSFAIRSCFGEVDTVK 449
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
SLI +Y++ ++ AY L++ M +IS ++ISG D S+EA L ++M+L +
Sbjct: 450 NSLITMYSRCKDLKHAYLLFQLMEAKSLISWNSIISGCCHMDR-SEEASFLLREMLLSGI 508
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAV-GNALIDMYAKSGEIADAN 389
+ V + +L +CA VA+L G++ H + + + D + NAL+DMYA+SG++ +A
Sbjct: 509 EPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEAR 568
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
R FD +G+++ +++TS+IAGY G G A++L+++M + + P+ +T +++L ACSH+G
Sbjct: 569 RVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSG 628
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
L +G LF M + Y + P EHF+C+ DLF R G L A +IR M KPT ++W+ +
Sbjct: 629 LVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATL 688
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
+GAC I+ NT +GE AA L +M+PE YV+++N+Y AAG W+ K R M + +R
Sbjct: 689 IGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANMYAAAGCWNKLAKVRXFMRDLGVR 748
Query: 570 KNPGYSFL 577
K PG +++
Sbjct: 749 KAPGCAWV 756
>gi|50251760|dbj|BAD27693.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|222623393|gb|EEE57525.1| hypothetical protein OsJ_07836 [Oryza sativa Japonica Group]
Length = 667
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 194/555 (34%), Positives = 301/555 (54%), Gaps = 6/555 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
D T+ + C + R +H + G+ + ++ +I Y GDV +A
Sbjct: 106 FDHLTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAV 165
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F M R VVSW A+I+G +NGY E AL VF M GV ++ T S L ACA+ + L
Sbjct: 166 FGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDL 225
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER-KDVVSWNAMIGG 206
GR + ++ + + VK+AL+D+Y KC +EDA +F+ + KDVVSW AMIG
Sbjct: 226 NTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGA 285
Query: 207 LAMQGFNDDSFWLFRSMMRQGMK-PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
+ ++ L M+ G P+ T+ +L A H L I+LGL+S
Sbjct: 286 YVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKS 345
Query: 266 SNKLTGSLIDVYAKYGSIR-SAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ +LID YA+ G ++ L R + + + A +SG+ K+A +LFK
Sbjct: 346 DIAVETALIDAYARCGKMKLMRLTLERGSWRAE--TWNAALSGYTVS-GREKKAIELFKR 402
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
MI + + D + +L A A L G+ IH F + LID+Y+K+G+
Sbjct: 403 MIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGD 462
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ A F + +K+V++WT++IAGY HG+ AI LY +M G PN VT +LL+A
Sbjct: 463 LDAAWALFQWLPEKDVVAWTTIIAGYGIHGHARTAILLYDRMVESGGKPNTVTIATLLYA 522
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
CSH G+ EG ++F DM N + ++P EH+SC+VD+ R G++E A+ +I+ M +P+ S
Sbjct: 523 CSHAGMIDEGIKVFKDMRNVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTS 582
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
+W A+LGAC ++ N GE+AA+ LF ++PE + +YV+L NIY AA W + + R++M
Sbjct: 583 VWGALLGACVLHKNVEFGEVAAKRLFQLDPENTGSYVLLGNIYAAADRWRDVQDVRRMMV 642
Query: 565 ERSLRKNPGYSFLQS 579
ER L K PG S +++
Sbjct: 643 ERGLLKEPGSSLVEA 657
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 139/516 (26%), Positives = 243/516 (47%), Gaps = 22/516 (4%)
Query: 57 ITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWT-AMISGYAQNGYDENA 115
+T+G+ H + + Y G SA +MP+ VS++ +++ Y G A
Sbjct: 37 LTSGHLLRYHGLHPLFMVYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREA 96
Query: 116 LLVFSAMLRSGVRA-NQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLD 174
L V+SAM RA + T+ A +ACA +R + GR + F + +V++AL+
Sbjct: 97 LAVYSAM-----RAFDHLTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALIS 151
Query: 175 LYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFT 234
+Y CG + A +F + + VVSWNA+I G G+ + + +F M G+ D T
Sbjct: 152 MYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRAT 211
Query: 235 LGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY-RSM 293
+ S+L A +L +H L+ GL + +LID+Y K S+ A +++
Sbjct: 212 VVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCK 271
Query: 294 LKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG-IDDVILCLMLNICANVASLNL 352
D++S TA+I + +D + EA L M++ + V + +L+ CA++ S
Sbjct: 272 HDKDVVSWTAMIGAYVLNDR-AFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKH 330
Query: 353 GRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAK 412
+ HA + D AV ALID YA+ G++ R E G +W + ++GY
Sbjct: 331 AKCTHALCIRLGLKSDIAVETALIDAYARCGKM-KLMRLTLERGSWRAETWNAALSGYTV 389
Query: 413 HGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAE 472
G +AIEL+K+M E + P+ T S+L A + + EG + ++ L E
Sbjct: 390 SGREKKAIELFKRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLT-LGFLRSTE 448
Query: 473 HFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD- 531
+ ++D++++ G L++A+ + + + K + W+ I+ I+G+ L L+D
Sbjct: 449 IATGLIDVYSKAGDLDAAWALFQWLPEKDVVA-WTTIIAGYGIHGHARTAIL----LYDR 503
Query: 532 -MEPEKSVNYVVLSNIYTA---AGAWDNARKTRKLM 563
+E N V ++ + A AG D K K M
Sbjct: 504 MVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDM 539
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 198/421 (47%), Gaps = 16/421 (3%)
Query: 3 IVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
++ K G ++AL+ ++ +D +T +S+L C K +H + G
Sbjct: 180 VIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDKG 239
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMP-ERNVVSWTAMISGYAQNGYDENALLVF 119
+ + +I Y K + AR+ FD +++VVSWTAMI Y N A+ +
Sbjct: 240 LGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVLNDRAFEAISLG 299
Query: 120 SAMLRSGVR-ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
ML SG N T L ACA M + + + ++ V++AL+D YA+
Sbjct: 300 CQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYAR 359
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
CG ++ + ER + +WNA + G + G + LF+ M+ + ++PD T+ SI
Sbjct: 360 CGKMKLMRLTLERGSWR-AETWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASI 418
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
L A +L + IH ++ LG S ++ LIDVY+K G + +A+ L++ + + D+
Sbjct: 419 LPAYAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDV 478
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
++ T +I+G+ H++ A L+ M+ + V + +L C++ ++ G ++
Sbjct: 479 VAWTTIIAGYG-IHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKV-- 535
Query: 359 FAFKYQSSYDAAVGNA-----LIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAK 412
FK + + N L+DM ++G I +A+R +M + + W +L+
Sbjct: 536 --FKDMRNVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVL 593
Query: 413 H 413
H
Sbjct: 594 H 594
>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
Length = 886
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 188/534 (35%), Positives = 302/534 (56%), Gaps = 6/534 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HA ++ G+ S+ L+ +I YAK G + A + FD MPERNVVSWTA++ G+ +G
Sbjct: 222 LHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGE 281
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
L +F M SG N+FT S+ L+AC + G I G + F + V ++
Sbjct: 282 ARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQIHGVCVRTGFEGHDVVANS 339
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ-GMKP 230
L+ +Y+K W DA +F+ I +++ +WN+MI G A G DS +FR M R+ +P
Sbjct: 340 LVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQP 399
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK--LTGSLIDVYAKYGSIRSAYQ 288
D FT S+L+A G + +Q+H + G+ ++ L G+L+DVY K + A Q
Sbjct: 400 DEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQ 459
Query: 289 LYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
++ + + + I T +I G A++ KEA LF+ + D +L ++ + A+ A
Sbjct: 460 VFDGLERRNAIQWTTVIVGHAQE-GQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFA 518
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA 408
+ G+Q+H + K + D +V N+L+DMY K G +A R F EM +NV+SWT++I
Sbjct: 519 LVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMIN 578
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
G KHG+G EAI+L+++M+ EG+ ++V +L+LL ACSH+GL E F+ + R+
Sbjct: 579 GVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMR 638
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARN 528
P+AEH++C+VDL R G+L A +I M ++PT +W +L AC ++ + ++G
Sbjct: 639 PKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDV 698
Query: 529 LFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
L ++ + VNYV+LSNI AG W + R M + LRK G S+ + K+
Sbjct: 699 LLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDKE 752
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 213/442 (48%), Gaps = 16/442 (3%)
Query: 138 LRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDV 197
LRA AR L+GG + ++ K F + + + L+D+YAKCG + A +F+ + ++V
Sbjct: 207 LRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNV 266
Query: 198 VSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDL 257
VSW A++ G G + LF M G P+ FTL + L+A GG QIH +
Sbjct: 267 VSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTR--AGVQIHGV 324
Query: 258 IIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKE 317
++ G E + + SL+ +Y+K A +++ + ++ + ++ISG+A ++
Sbjct: 325 CVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAH-AGQGRD 383
Query: 318 AFDLFKDMILKK-MGIDDVILCLMLNICANVASLNLGRQIH-AFAFKYQS-SYDAAVGNA 374
+ +F++M + D+ +L C+ + + G Q+H A A + S + +A + A
Sbjct: 384 SLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGA 443
Query: 375 LIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
L+D+Y K + A + FD + +N I WT++I G+A+ G EA+ L+++ G+ +
Sbjct: 444 LLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRAD 503
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI 494
S++ + L +G ++ L + S +VD++ + G A
Sbjct: 504 GHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANS-LVDMYLKCGLTGEAGRRF 562
Query: 495 RQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPE----KSVNYVVLSNIYTAA 550
R+M + S W+A++ +G+ G A +M+ E V Y+ L + + +
Sbjct: 563 REMPARNVVS-WTAMINGVGKHGH---GREAIDLFEEMQAEGVEADEVAYLALLSACSHS 618
Query: 551 GAWDNARKT-RKLMEERSLRKN 571
G D R+ ++ ++R +R
Sbjct: 619 GLVDECRRYFSRICQDRRMRPK 640
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 123/244 (50%), Gaps = 12/244 (4%)
Query: 220 FRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAK 279
F M R+ M D +LRAS G L Q+H ++KLG S L +LID+YAK
Sbjct: 194 FLPMERRRMIAD------LLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAK 247
Query: 280 YGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCL 339
G + A +++ M + +++S TAL+ GF ++E LF +M ++ L
Sbjct: 248 CGKLHMAGEVFDGMPERNVVSWTALMVGFLH-HGEARECLRLFGEMRGSGTSPNEFTLSA 306
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN 399
L C G QIH + V N+L+ MY+K DA R FD + +N
Sbjct: 307 TLKACG--GGTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRN 364
Query: 400 VISWTSLIAGYAKHGYGHEAIELYKKM--KHEGMVPNDVTFLSLLFACSHTGLTCEGWEL 457
+ +W S+I+GYA G G +++ ++++M +H+ P++ TF SLL ACS G EG ++
Sbjct: 365 LATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQ-PDEFTFASLLKACSGLGAAREGAQV 423
Query: 458 FTDM 461
M
Sbjct: 424 HAAM 427
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 3/272 (1%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYE--SNLHLSTKVIIFYAKVGDVL 82
D D T+ SLL+ C A R+ +HA + G SN L+ ++ Y K +
Sbjct: 396 DEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLP 455
Query: 83 SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA 142
A + FD + RN + WT +I G+AQ G + A+ +F SGVRA+ SS + A
Sbjct: 456 VAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFA 515
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
++ G+ + K ++ V ++L+D+Y KCG +A F + ++VVSW A
Sbjct: 516 DFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTA 575
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKL 261
MI G+ G ++ LF M +G++ D ++L A S G+ +
Sbjct: 576 MINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDR 635
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ + ++D+ + G +R A +L SM
Sbjct: 636 RMRPKAEHYACMVDLLGRAGELREAKELILSM 667
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 6/145 (4%)
Query: 2 NIVRANFKTGQLKQAL----KFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHII 57
++ + + GQ+K+A+ +F S D S++ D Q +H +
Sbjct: 474 TVIVGHAQEGQVKEAMCLFRRFWSS--GVRADGHVLSSVVAVFADFALVEQGKQVHCYTA 531
Query: 58 TNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALL 117
++ ++ ++ Y K G A + F MP RNVVSWTAMI+G ++G+ A+
Sbjct: 532 KTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAID 591
Query: 118 VFSAMLRSGVRANQFTYSSALRACA 142
+F M GV A++ Y + L AC+
Sbjct: 592 LFEEMQAEGVEADEVAYLALLSACS 616
>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
Length = 690
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 188/534 (35%), Positives = 302/534 (56%), Gaps = 6/534 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HA ++ G+ S+ L+ +I YAK G + A + FD MPERNVVSWTA++ G+ +G
Sbjct: 26 LHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGE 85
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
L +F M SG N+FT S+ L+AC + G I G + F + V ++
Sbjct: 86 ARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQIHGVCVRTGFEGHDVVANS 143
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ-GMKP 230
L+ +Y+K W DA +F+ I +++ +WN+MI G A G DS +FR M R+ +P
Sbjct: 144 LVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQP 203
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK--LTGSLIDVYAKYGSIRSAYQ 288
D FT S+L+A G + +Q+H + G+ ++ L G+L+DVY K + A Q
Sbjct: 204 DEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQ 263
Query: 289 LYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
++ + + + I T +I G A++ KEA LF+ + D +L ++ + A+ A
Sbjct: 264 VFDGLERRNAIQWTTVIVGHAQE-GQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFA 322
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA 408
+ G+Q+H + K + D +V N+L+DMY K G +A R F EM +NV+SWT++I
Sbjct: 323 LVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMIN 382
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
G KHG+G EAI+L+++M+ EG+ ++V +L+LL ACSH+GL E F+ + R+
Sbjct: 383 GVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMR 442
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARN 528
P+AEH++C+VDL R G+L A +I M ++PT +W +L AC ++ + ++G
Sbjct: 443 PKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDV 502
Query: 529 LFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
L ++ + VNYV+LSNI AG W + R M + LRK G S+ + K+
Sbjct: 503 LLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDKE 556
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 213/440 (48%), Gaps = 16/440 (3%)
Query: 138 LRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDV 197
LRA AR L+GG + ++ K F + + + L+D+YAKCG + A +F+ + ++V
Sbjct: 11 LRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNV 70
Query: 198 VSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDL 257
VSW A++ G G + LF M G P+ FTL + L+A GG QIH +
Sbjct: 71 VSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAG--VQIHGV 128
Query: 258 IIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKE 317
++ G E + + SL+ +Y+K A +++ + ++ + ++ISG+A ++
Sbjct: 129 CVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAH-AGQGRD 187
Query: 318 AFDLFKDMILKK-MGIDDVILCLMLNICANVASLNLGRQIH-AFAFKYQS-SYDAAVGNA 374
+ +F++M + D+ +L C+ + + G Q+H A A + S + +A + A
Sbjct: 188 SLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGA 247
Query: 375 LIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
L+D+Y K + A + FD + +N I WT++I G+A+ G EA+ L+++ G+ +
Sbjct: 248 LLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRAD 307
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI 494
S++ + L +G ++ L + S +VD++ + G A
Sbjct: 308 GHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANS-LVDMYLKCGLTGEAGRRF 366
Query: 495 RQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPE----KSVNYVVLSNIYTAA 550
R+M + S W+A++ +G+ G A +M+ E V Y+ L + + +
Sbjct: 367 REMPARNVVS-WTAMINGVGKHGH---GREAIDLFEEMQAEGVEADEVAYLALLSACSHS 422
Query: 551 GAWDNARKT-RKLMEERSLR 569
G D R+ ++ ++R +R
Sbjct: 423 GLVDECRRYFSRICQDRRMR 442
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 118/229 (51%), Gaps = 6/229 (2%)
Query: 235 LGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML 294
+ +LRAS G L Q+H ++KLG S L +LID+YAK G + A +++ M
Sbjct: 7 IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP 66
Query: 295 KTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGR 354
+ +++S TAL+ GF ++E LF +M ++ L L C G
Sbjct: 67 ERNVVSWTALMVGFLH-HGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGV 123
Query: 355 QIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG 414
QIH + V N+L+ MY+K DA R FD + +N+ +W S+I+GYA G
Sbjct: 124 QIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAG 183
Query: 415 YGHEAIELYKKM--KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM 461
G +++ ++++M +H+ P++ TF SLL ACS G EG ++ M
Sbjct: 184 QGRDSLLVFREMQRRHDEQ-PDEFTFASLLKACSGLGAAREGAQVHAAM 231
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 3/272 (1%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYE--SNLHLSTKVIIFYAKVGDVL 82
D D T+ SLL+ C A R+ +HA + G SN L+ ++ Y K +
Sbjct: 200 DEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLP 259
Query: 83 SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA 142
A + FD + RN + WT +I G+AQ G + A+ +F SGVRA+ SS + A
Sbjct: 260 VAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFA 319
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
++ G+ + K ++ V ++L+D+Y KCG +A F + ++VVSW A
Sbjct: 320 DFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTA 379
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKL 261
MI G+ G ++ LF M +G++ D ++L A S G+ +
Sbjct: 380 MINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDR 439
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ + ++D+ + G +R A +L SM
Sbjct: 440 RMRPKAEHYACMVDLLGRAGELREAKELILSM 471
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 6/145 (4%)
Query: 2 NIVRANFKTGQLKQAL----KFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHII 57
++ + + GQ+K+A+ +F S D S++ D Q +H +
Sbjct: 278 TVIVGHAQEGQVKEAMCLFRRFWSS--GVRADGHVLSSVVAVFADFALVEQGKQVHCYTA 335
Query: 58 TNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALL 117
++ ++ ++ Y K G A + F MP RNVVSWTAMI+G ++G+ A+
Sbjct: 336 KTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAID 395
Query: 118 VFSAMLRSGVRANQFTYSSALRACA 142
+F M GV A++ Y + L AC+
Sbjct: 396 LFEEMQAEGVEADEVAYLALLSACS 420
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 198/588 (33%), Positives = 329/588 (55%), Gaps = 15/588 (2%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNG 60
++RA G ++A+ + P+ T+ +L+ C K + IH I
Sbjct: 90 LIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEASEGREIHCDIKRLR 149
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYA--QNGYDENALLV 118
ESN+++ST ++ FYAK G + A++ FD+M +R+VV+W +MISG++ + YDE A L+
Sbjct: 150 LESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLL 209
Query: 119 FSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
+++ V N T L A A++ L+ G+ I G + FV ++ V + +LD+Y K
Sbjct: 210 --VQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGK 267
Query: 179 CGWIEDAWILFERIE-RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCF---- 233
C I+ A +F+ + K+ V+W+AM+G + F ++ LF ++ +K D
Sbjct: 268 CQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLM--LKDDVIVLSA 325
Query: 234 -TLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRS 292
TL +++R +L + +H IK G + +L+ +YAK G I A + +
Sbjct: 326 VTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNE 385
Query: 293 MLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNL 352
M D +S TA+ISG+ ++ N S+E +F +M L + + L +L CA++A L+
Sbjct: 386 MDLRDAVSFTAIISGYVQNGN-SEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHY 444
Query: 353 GRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAK 412
G H +A + D + NALIDMYAK G+I A + FD M + ++SW ++I Y
Sbjct: 445 GSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGI 504
Query: 413 HGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAE 472
HG G EA+ L+ M+ EG+ P+DVTF+ L+ ACSH+GL EG F M + I+PR E
Sbjct: 505 HGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRME 564
Query: 473 HFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDM 532
H++C+VDL +R G + ++ I +M ++P +W A+L AC +Y N LGE ++ + +
Sbjct: 565 HYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKL 624
Query: 533 EPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSS 580
PE + N+V+LSN+Y+A G WD+A + R +E+ K+PG S+++ S
Sbjct: 625 GPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEIS 672
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 160/522 (30%), Positives = 278/522 (53%), Gaps = 37/522 (7%)
Query: 36 LLQFCIDKKAERQAHLIHAHIIT---NGYESNLH----LSTKVIIFYAKVGDVLSARKAF 88
LL+ CI K+ + LIH H++ +E+NL K++ Y ++ AR F
Sbjct: 15 LLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIARHVF 74
Query: 89 DRMPER--NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
D+MP R NVV W +I YA NG E A+ ++ ML G+ N+FT+ L+AC+ ++
Sbjct: 75 DKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKE 134
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
GR I I++ R N++V +AL+D YAKCG ++DA +F+++ ++DVV+WN+MI G
Sbjct: 135 ASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISG 194
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
++ + D M+ + P+ T+ +L A L +IH ++ G
Sbjct: 195 FSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGD 254
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ ++DVY K I A +++ M + + ++ +A++ + D +EA +LF +
Sbjct: 255 VVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCD-FMREALELFCQL 313
Query: 326 ILKKMGIDDVI------LCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMY 379
++ K DDVI L ++ +CAN+ L+ G +H +A K D VGN L+ MY
Sbjct: 314 LMLK---DDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMY 370
Query: 380 AKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFL 439
AK G I A R F+EM ++ +S+T++I+GY ++G E + ++ +M+ G+ P T
Sbjct: 371 AKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLA 430
Query: 440 SLLFACSH-TGLTCEGWELFTDMINKYRILP--RAEHFSC--VVDLFARRGQLESAYNMI 494
S+L AC+H GL + + Y I+ A+ C ++D++A+ G++++A +
Sbjct: 431 SVLPACAHLAGLH------YGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVF 484
Query: 495 RQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD-MEPE 535
+M+ + S W+ ++ A I+G +G L A LFD M+ E
Sbjct: 485 DRMHKRGIVS-WNTMIIAYGIHG---IG-LEALLLFDNMQSE 521
>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
Length = 766
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 190/581 (32%), Positives = 323/581 (55%), Gaps = 5/581 (0%)
Query: 2 NIVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
+++ A+ + G+ AL S+ T D S ++ C + +HAH + +
Sbjct: 122 SVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKS 181
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
S+L + ++ Y+K G V F+R+ +++++SW ++I+G+AQ G++ AL VF
Sbjct: 182 ERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVF 241
Query: 120 SAMLRSGVR-ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
M+ G N+F + SA RAC + + G I G K R +L+V +L D+YA+
Sbjct: 242 RKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYAR 301
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
++ A + F RIE D+VSWN+++ +++G ++ LF M G++PD T+ +
Sbjct: 302 FKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGL 361
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
L A VG L IH ++KLGL+ + SL+ +YA+ + SA ++ + D+
Sbjct: 362 LCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDV 421
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
++ ++++ A+ NH +E LF + + +D + L +L+ A + + +Q+HA
Sbjct: 422 VTWNSILTACAQH-NHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHA 480
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD-KNVISWTSLIAGYAKHGYGH 417
+AFK D + N LID YAK G + DA R F+ MG+ ++V SW+SLI GYA+ GY
Sbjct: 481 YAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAK 540
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
EA++L+ +M+ G+ PN VTF+ +L ACS G EG ++ M +Y I+P EH SC+
Sbjct: 541 EALDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCI 600
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKS 537
VDL AR G+L A N I QM +P +W +L A ++ + +G+ AA + +++P S
Sbjct: 601 VDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHS 660
Query: 538 VNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
YV+L NIY A+G W+ + +K M ++K+PG S+++
Sbjct: 661 AAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVK 701
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 146/500 (29%), Positives = 261/500 (52%), Gaps = 24/500 (4%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYES-------NLHLSTKVIIFYAKVGDVLSAR 85
Y +L+ C ++ Q +H H++ + S N L +I Y + SAR
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
+ FD MP RN VSW ++I+ + QNG +AL +FS+MLRSG A+QF SA+RAC +
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
+ GR + K +L V++AL+ +Y+K G ++D ++LFERI+ KD++SW ++I
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 226
Query: 206 GLAMQGFNDDSFWLFRSMMRQG-MKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLG 262
G A QGF ++ +FR M+ +G P+ F GS RA +VG E + QIH L IK
Sbjct: 227 GFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGE--QIHGLSIKYR 284
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
L+ + SL D+YA++ ++ SA + + D++S ++++ ++ + S EA LF
Sbjct: 285 LDRDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLS-EALVLF 343
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
+M + D + + +L C +L GR IH++ K D +V N+L+ MYA+
Sbjct: 344 SEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARC 403
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
+++ A F E+ D++V++W S++ A+H + E ++L+ + + ++ ++L
Sbjct: 404 SDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVL 463
Query: 443 FACSHTGL-----TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
A + G + +++ R+L + ++D +A+ G L+ A + M
Sbjct: 464 SASAELGYFEMVKQVHAYAFKAGLVDD-RMLS-----NTLIDTYAKCGSLDDAMRLFEIM 517
Query: 498 NIKPTASLWSAILGACSIYG 517
WS+++ + +G
Sbjct: 518 GNNRDVFSWSSLIVGYAQFG 537
>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 190/529 (35%), Positives = 301/529 (56%), Gaps = 5/529 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H +I ++ + ++ T ++ YAK G V A+K FD++ ++ V AMIS + NG
Sbjct: 671 VHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGR 730
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+AL +++ M + FT SS L C+ + GR + + K N+ ++SA
Sbjct: 731 AYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSA 790
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
LL +Y KCG EDA +F ++ +DVV+W +MI G D+ LFR+M ++G+K D
Sbjct: 791 LLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKAD 850
Query: 232 CFTLGSILRASVG--GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
+ S++ A +G +EL + IH IK GLES + SL+D+Y+K+G SA +
Sbjct: 851 SDVMTSVISAGLGLENVELGHL--IHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMV 908
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ SM ++++ ++IS ++ + + + +L ++ +D V + +L ++VA+
Sbjct: 909 FSSMPNKNLVAWNSMISCYSWN-GLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAA 967
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
L G+ +HA+ + Q D V NALIDMY K G + A F+ M +N+++W S+IAG
Sbjct: 968 LLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAG 1027
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
Y HG EA+ L+K+MK P++VTFL+L+ +CSH+G+ EG LF M +Y + P
Sbjct: 1028 YGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEP 1087
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
R EH++ VVDL R G+L+ AY+ IR M I S+W +L AC + N LGEL A NL
Sbjct: 1088 RMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNL 1147
Query: 530 FDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
MEP + NYV L N+Y WD A R M+ R L+K+PG S+++
Sbjct: 1148 LKMEPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWIE 1196
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 152/534 (28%), Positives = 268/534 (50%), Gaps = 22/534 (4%)
Query: 4 VRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGY 61
++A + G+ QAL+ P + L + T+ SLL+ C IHA I+T G
Sbjct: 413 IKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGL 472
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER-----NVVSWTAMISGYAQNGYDENAL 116
+S+ +++T +I Y K G + SA + FD+M E ++ W +I GY + G+ E L
Sbjct: 473 QSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGL 532
Query: 117 LVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLY 176
F M G+R + ++ S L C R+ W GR I G I + F + ++++AL+ +Y
Sbjct: 533 AQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMY 592
Query: 177 AKCGWIEDAWILFERIE-RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTL 235
+ C +AW LF ++E R ++V+WN MIGG G + S L+ + K +
Sbjct: 593 SSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASF 652
Query: 236 GSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLK 295
A G L Q+H +IK+ + + SL+ +YAK GS+ A +++ +L
Sbjct: 653 TGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLD 712
Query: 296 TDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQ 355
++ A+IS F + + +A L+ M + +D + +L+ C+ V S + GR
Sbjct: 713 KEVELRNAMISAFI-GNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRT 771
Query: 356 IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGY 415
+HA K + A+ +AL+ MY K G DA+ F M +++V++W S+IAG+ ++
Sbjct: 772 VHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRR 831
Query: 416 GHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRI---LPRAE 472
+A++L++ M+ EG+ + S++ A GL E EL +I+ + I L
Sbjct: 832 FKDALDLFRAMEKEGVKADSDVMTSVISA----GLGLENVEL-GHLIHGFAIKRGLESDV 886
Query: 473 HFSC-VVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
+C +VD++++ G ESA + M K + W++++ S Y L E++
Sbjct: 887 FVACSLVDMYSKFGFAESAEMVFSSMPNKNLVA-WNSMI---SCYSWNGLPEMS 936
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 240/471 (50%), Gaps = 10/471 (2%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER-NVVSWTAMISGYAQNG 110
IH +II N +E + +L T +I Y+ + A F ++ R N+V+W MI G+ +NG
Sbjct: 569 IHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENG 628
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
E +L ++S + +++ A AC+ L GR + + K F ++ +V +
Sbjct: 629 MWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCT 688
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
+LL +YAK G +EDA +F+++ K+V NAMI G D+ L+ M+ G P
Sbjct: 689 SLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNK-MKAGETP 747
Query: 231 -DCFTLGSILRAS--VGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
D FT+ S+L VG + + +H +IK ++S+ + +L+ +Y K GS A
Sbjct: 748 VDSFTISSLLSGCSVVGSYDFGRT--VHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDAD 805
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
++ +M + D+++ ++I+GF ++ K+A DLF+ M + + D ++ +++ +
Sbjct: 806 SVFYTMKERDVVAWGSMIAGFCQNRRF-KDALDLFRAMEKEGVKADSDVMTSVISAGLGL 864
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI 407
++ LG IH FA K D V +L+DMY+K G A F M +KN+++W S+I
Sbjct: 865 ENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMI 924
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRI 467
+ Y+ +G +I L ++ G + V+ ++L A S +G L I + +I
Sbjct: 925 SCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQI-RLQI 983
Query: 468 LPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
+ + ++D++ + G L+ A + M + + W++++ +GN
Sbjct: 984 PSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVT-WNSMIAGYGSHGN 1033
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 144/281 (51%), Gaps = 2/281 (0%)
Query: 49 AHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQ 108
HLIH I G ES++ ++ ++ Y+K G SA F MP +N+V+W +MIS Y+
Sbjct: 870 GHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSW 929
Query: 109 NGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFV 168
NG E ++ + +L+ G + + ++ L A + + L G+ + + + +L V
Sbjct: 930 NGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQV 989
Query: 169 KSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGM 228
++AL+D+Y KCG ++ A ++FE + R+++V+WN+MI G G +++ LF+ M R
Sbjct: 990 ENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSET 1049
Query: 229 KPDCFT-LGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
PD T L I S G+ ++ + I+ G+E + S++D+ + G + AY
Sbjct: 1050 APDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAY 1109
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
R M D L FA + + E +L D +LK
Sbjct: 1110 SFIRGM-PIDADRSVWLCLLFACRAHRNMELGELVADNLLK 1149
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 189/551 (34%), Positives = 304/551 (55%), Gaps = 2/551 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D +T ++++ C R ++H G + ++ ++ Y+K G + AR F
Sbjct: 298 DVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALF 357
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS-GVRANQFTYSSALRACARMRWL 147
D +NVVSW +I GY++ G + M R VR N+ T + L AC+ L
Sbjct: 358 DMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQL 417
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ I G + F+++ V +A + YAKC ++ A +F +E K V SWNA+IG
Sbjct: 418 LSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAH 477
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A GF S LF MM GM PD FT+GS+L A L +IH +++ GLE
Sbjct: 478 AQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDE 537
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ SL+ +Y + S+ ++ M ++ +I+GF++++ EA D F+ M+
Sbjct: 538 FIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPC-EALDTFRQMLS 596
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ ++ + +L C+ V++L LG+++H+FA K S DA V ALIDMYAK G +
Sbjct: 597 GGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQ 656
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
+ FD + +K+ W +IAGY HG+G +AIEL++ M+++G P+ TFL +L AC+H
Sbjct: 657 SQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNH 716
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
GL EG + M N Y + P+ EH++CVVD+ R GQL A ++ +M +P + +WS
Sbjct: 717 AGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWS 776
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
++L +C YG+ +GE ++ L ++EP K+ NYV+LSN+Y G WD RK R+ M+E
Sbjct: 777 SLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENG 836
Query: 568 LRKNPGYSFLQ 578
L K+ G S+++
Sbjct: 837 LHKDAGCSWIE 847
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 138/521 (26%), Positives = 254/521 (48%), Gaps = 13/521 (2%)
Query: 21 LSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGD 80
LS D D T + + C +HA + G S+ + +I Y K G
Sbjct: 186 LSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGF 245
Query: 81 VLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS---GVRANQFTYSSA 137
V SA K F+ M RN+VSW +++ ++NG VF +L S G+ + T +
Sbjct: 246 VESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTV 305
Query: 138 LRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDV 197
+ ACA + ++ G ++ G K E + V ++L+D+Y+KCG++ +A LF+ K+V
Sbjct: 306 IPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNV 365
Query: 198 VSWNAMIGGLAMQGFNDDSFWLFRSMMR-QGMKPDCFTLGSILRASVGGIELMKISQIHD 256
VSWN +I G + +G F L + M R + ++ + T+ ++L A G +L+ + +IH
Sbjct: 366 VSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHG 425
Query: 257 LIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSK 316
+ G + + + YAK S+ A +++ M + S ALI A++ K
Sbjct: 426 YAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGK 485
Query: 317 EAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALI 376
+ DLF M+ M D + +L CA + L G++IH F + D +G +L+
Sbjct: 486 -SLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLM 544
Query: 377 DMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDV 436
+Y + + FD+M +K+++ W +I G++++ EA++ +++M G+ P ++
Sbjct: 545 SLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEI 604
Query: 437 TFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSC-VVDLFARRGQLESAYNMIR 495
+L ACS G E+ + + + L +C ++D++A+ G +E + N+
Sbjct: 605 AVTGVLGACSQVSALRLGKEVHSFALKAH--LSEDAFVTCALIDMYAKCGCMEQSQNIFD 662
Query: 496 QMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEK 536
++N K A +W+ I+ I+G+ L A LF++ K
Sbjct: 663 RVNEKDEA-VWNVIIAGYGIHGHG----LKAIELFELMQNK 698
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 144/571 (25%), Positives = 272/571 (47%), Gaps = 41/571 (7%)
Query: 36 LLQFCIDKKAERQAHLIHAHI-ITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
LL+ C K +HA + ++ +++ LST++I Y+ G +R FD E+
Sbjct: 98 LLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEK 157
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLR-SGVRANQFTYSSALRACARMRWLQGGRMI 153
++ + A++SGY++N +A+ +F +L + + + FT +ACA + ++ G +
Sbjct: 158 DLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAV 217
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN 213
K + FV +AL+ +Y KCG++E A +FE + +++VSWN+++ + G
Sbjct: 218 HALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGF 277
Query: 214 DDSFWLFRSMM---RQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
+ +F+ ++ +G+ PD T+ +++ A E+ +H L KLG+ +
Sbjct: 278 GECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVN 337
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL-KK 329
SL+D+Y+K G + A L+ +++S +I G++++ + + F+L ++M +K
Sbjct: 338 NSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDF-RGVFELLQEMQREEK 396
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ +++V + +L C+ L ++IH +AF++ D V NA + YAK + A
Sbjct: 397 VRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAE 456
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS--- 446
R F M K V SW +LI +A++G+ ++++L+ M GM P+ T SLL AC+
Sbjct: 457 RVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLK 516
Query: 447 --------HTGLTCEGWEL--------------FTDMINKYRILPRAEHFSCV-----VD 479
H + G EL + M+ I + E+ S V +
Sbjct: 517 FLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMIT 576
Query: 480 LFARRGQLESAYNMIRQM---NIKPTASLWSAILGACSIYGNTSLG-ELAARNLFDMEPE 535
F++ A + RQM IKP + +LGACS LG E+ + L E
Sbjct: 577 GFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSE 636
Query: 536 KSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
+ L ++Y G + ++ + E+
Sbjct: 637 DAFVTCALIDMYAKCGCMEQSQNIFDRVNEK 667
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 156/322 (48%), Gaps = 17/322 (5%)
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI-L 327
L+ +I +Y+ GS + ++ + + D+ AL+SG++R+ ++A LF +++
Sbjct: 130 LSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALF-RDAISLFLELLSA 188
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ D+ L + CA VA + LG +HA A K DA VGNALI MY K G +
Sbjct: 189 TDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVES 248
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM---KHEGMVPNDVTFLSLLFA 444
A + F+ M ++N++SW S++ +++G E ++K++ + EG+VP+ T ++++ A
Sbjct: 249 AVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPA 308
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
C+ G G + + K I + +VD++++ G L A + MN
Sbjct: 309 CAAVGEVRMGM-VVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALF-DMNGGKNVV 366
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
W+ I I+G + G+ R +F++ E V N T +L+
Sbjct: 367 SWNTI-----IWGYSKEGDF--RGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLL- 418
Query: 565 ERSLRKNPGYSFLQSSKKNILL 586
SL++ GY+F K+ L+
Sbjct: 419 --SLKEIHGYAFRHGFLKDELV 438
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 194/538 (36%), Positives = 314/538 (58%), Gaps = 10/538 (1%)
Query: 47 RQAHLIHAHIITNGY-ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISG 105
R+ +H + I G ++ + + +I YAK GD+ AR F M +++ VSW +MI+G
Sbjct: 119 RKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITG 178
Query: 106 YAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVEN 165
QN E+A+ +++M ++G+ + F SAL +CA + + G+ G K +
Sbjct: 179 LDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMD 238
Query: 166 LFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN-DDSFWLFRSMM 224
+ V + LL LYA+ + + +F + +D VSWN +IG LA G + ++ +F MM
Sbjct: 239 VSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMM 298
Query: 225 RQGMKPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
R G P+ T ++L A+V + K+S QIH LI+K ++ N + +L+ Y K G +
Sbjct: 299 RAGWSPNRVTFINLL-ATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEM 357
Query: 284 RSAYQLYRSML-KTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLN 342
+ +++ M + D +S ++ISG+ ++ K A DL M+ + +D +L+
Sbjct: 358 ENCEEIFSRMSERRDEVSWNSMISGYIHNELLCK-AMDLVWLMMQRGQRLDCFTFATVLS 416
Query: 343 ICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVIS 402
CA VA+L G ++HA A + D +G+AL+DMY+K G I A+R F+ M +N+ S
Sbjct: 417 ACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYS 476
Query: 403 WTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI 462
W S+I+GYA+HG+G A+ L+ +MK G +P+ +TF+ +L ACSH GL EG+E F M
Sbjct: 477 WNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMT 536
Query: 463 NKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN---T 519
Y ++PR EH+SC+VDL R G+L+ N I +M IKP +W +LGAC GN T
Sbjct: 537 EVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACC-RGNGRKT 595
Query: 520 SLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
LG AA LF+M+P+ +VNYV+LSN+Y + G W++ +TR+ M E +++K G S++
Sbjct: 596 ELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSWV 653
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 152/464 (32%), Positives = 249/464 (53%), Gaps = 11/464 (2%)
Query: 49 AHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQ 108
A+L H +++ +G++S+L L +I Y ++GD +SARK FD MP+RN V+W +ISGY Q
Sbjct: 19 ANLFHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQ 78
Query: 109 NGYDENALLVFSAMLRSGVRANQFTYSSALRACAR-MRWLQGGRMIQG-SIQKGRFVENL 166
NG E+A V M+ G N+F + SA+RAC M W + GR + G +I+ G +
Sbjct: 79 NGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKV 138
Query: 167 FVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ 226
V + L+++YAKCG I+ A +F + KD VSWN+MI GL +D+ + SM +
Sbjct: 139 AVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKT 198
Query: 227 GMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIR 284
G+ P F L S L AS+G I L + Q H IKLGL+ ++ +L+ +YA+ +
Sbjct: 199 GLMPSNFALISALSSCASLGCILLGQ--QTHGEGIKLGLDMDVSVSNTLLALYAETSRLA 256
Query: 285 SAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNIC 344
+++ ML+ D +S +I A EA ++F +M+ + V +L
Sbjct: 257 ECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATV 316
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD-KNVISW 403
+++++ L QIHA KY D A+ NAL+ Y KSGE+ + F M + ++ +SW
Sbjct: 317 SSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSW 376
Query: 404 TSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMIN 463
S+I+GY + +A++L M G + TF ++L AC+ G E+ I
Sbjct: 377 NSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAI- 435
Query: 464 KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
+ + S +VD++++ G+++ A R N+ P +L+S
Sbjct: 436 RACLESDVVIGSALVDMYSKCGRIDYAS---RFFNLMPVRNLYS 476
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 184/424 (43%), Gaps = 60/424 (14%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+++LL + +H IHA I+ + + + ++ Y K G++ + + F RM
Sbjct: 308 TFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRM 367
Query: 92 PE-RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
E R+ VSW +MISGY N A+ + M++ G R + FT+++ L ACA + L+ G
Sbjct: 368 SERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECG 427
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ + ++ + SAL+D+Y+KCG I+ A F + +++ SWN+MI G A
Sbjct: 428 MEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARH 487
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
G D++ LF M G PD T +L A S I
Sbjct: 488 GHGDNALRLFTRMKLSGQLPDHITFVGVLSAC---------SHI---------------- 522
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
L+D +Y +S ++Y + + + SC + G A + D ++ I KM
Sbjct: 523 -GLVDEGFEY--FKSMTEVYGLVPRVEHYSCMVDLLGRAGE-------LDKIENFI-NKM 571
Query: 331 GIDDVILC--LMLNIC--ANVASLNLGRQIHAFAFKYQSSYDAAVGNALI-DMYAKSGEI 385
I IL +L C N LGR+ F AV L+ +MYA G+
Sbjct: 572 PIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQ--NAVNYVLLSNMYASGGKW 629
Query: 386 ADANRAFDEMGDKNV-----ISWTSL-------IAGYAKH---GYGHEAI-ELYKKMKHE 429
D R M + V SW ++ +AG H G + + EL KK++
Sbjct: 630 EDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEKGLIYAKLKELDKKIRDA 689
Query: 430 GMVP 433
G VP
Sbjct: 690 GYVP 693
>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
Length = 673
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 189/537 (35%), Positives = 297/537 (55%), Gaps = 14/537 (2%)
Query: 51 LIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
++HAH+I G + + ++ YAK G +++ARK FD +P RNVV WT +++GY QN
Sbjct: 1 MVHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNS 60
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
E A+ VF ML SG + FT S AL AC+ + + G+ I K R + + +
Sbjct: 61 QPEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGN 120
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
AL LY+K G ++ + F KDV+SW +I G LF M+ + ++P
Sbjct: 121 ALCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEP 180
Query: 231 DCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQ 288
+ FTL S+L +++ +L Q+H L KLG ES+ ++T SL+ +Y K G I A
Sbjct: 181 NDFTLTSVLSLCSTIQSSDLGM--QVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKN 238
Query: 289 LYRSMLKTDIISCTALISGFAR-----DDNHS-----KEAFDLFKDMILKKMGIDDVILC 338
L+ M ++I+ A+I+G A+ DN S EA ++ + D L
Sbjct: 239 LFNRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLS 298
Query: 339 LMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK 398
+L +C+ +A+L G QIHA K D VG AL+DMY K G I A +AF +M +
Sbjct: 299 SILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTR 358
Query: 399 NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELF 458
+ISWTS+I +A+HG A++L++ M+ G PN +TF+ +L ACSH G+ E E F
Sbjct: 359 TLISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYF 418
Query: 459 TDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
M +Y+I P +H+ C+VD+F R G+L+ A+++I++M+++P +W ++ C +GN
Sbjct: 419 EIMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGN 478
Query: 519 TSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYS 575
LG AA L ++P + YVVL N+Y +A W++ R+LM+E + K +S
Sbjct: 479 EELGFYAAEQLLKLKPRSTETYVVLLNMYISAERWEDVSMVRRLMKEEKVGKLKDWS 535
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 133/274 (48%), Gaps = 12/274 (4%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T S+L C ++ +H+ G+ESNL ++ ++ Y K G + A+ F+RM
Sbjct: 184 TLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRM 243
Query: 92 PERNVVSWTAMISGYAQ-----------NGYDENALLVFSAMLRSGVRANQFTYSSALRA 140
+N+++W AMI+G+AQ AL ++ + RSG + + FT SS L
Sbjct: 244 EYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTV 303
Query: 141 CARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSW 200
C+R+ L+ G I K F+ ++ V +AL+D+Y KCG IE A F + + ++SW
Sbjct: 304 CSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLISW 363
Query: 201 NAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLII 259
+MI A G + + LF M G +P+ T +L A S G+ + +
Sbjct: 364 TSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIMQK 423
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ ++ G L+D++ + G + A+ + + M
Sbjct: 424 EYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRM 457
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 116/238 (48%), Gaps = 13/238 (5%)
Query: 1 MNIVRANF---KTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHII 57
M++ + NF +TG + L+ D T S+L C A Q IHA I
Sbjct: 262 MDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQTI 321
Query: 58 TNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALL 117
+G+ S++ + T ++ Y K G + ARKAF M R ++SWT+MI+ +A++G ++AL
Sbjct: 322 KSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLISWTSMITSFARHGQSQHALQ 381
Query: 118 VFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK-SALLDLY 176
+F M +G R NQ T+ L AC+ + +QK ++ + L+D++
Sbjct: 382 LFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIMQKEYKIKPVMDHYGCLVDMF 441
Query: 177 AKCGWIEDAWILFERIERKDVVS----WNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
+ G +++A F+ I+R DV W +I G G + F+ +++ +KP
Sbjct: 442 VRLGRLDEA---FDVIKRMDVEPNEFIWLLLIAGCRNHGNEELGFYAAEQLLK--LKP 494
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 189/550 (34%), Positives = 321/550 (58%), Gaps = 4/550 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
+ +LL+ + +HA++ G++++ + T +I Y+ G+V +AR+ FD +
Sbjct: 106 VFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGI 165
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
+++VSWT M++ YA+N E++LL+F M G R N FT S+AL++C + + G+
Sbjct: 166 YFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGK 225
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ G K + +L+V ALL+LY K G I +A FE + + D++ W+ MI A
Sbjct: 226 SVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSD 285
Query: 212 FNDDSFWLFRSMMRQG--MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
+ ++ LF MRQ + P+ FT S+L+A + L +QIH ++K+GL+S+ +
Sbjct: 286 KSKEALELF-CRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFV 344
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+ +L+DVYAK G I ++ +L+ + + ++ +I G+ + + K A +LF +M+
Sbjct: 345 SNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEK-ALNLFSNMLGLD 403
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ +V +L A++ +L GRQIH+ K + D+ V N+LIDMYAK G I DA
Sbjct: 404 IQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDAR 463
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
FD+M ++ +SW +LI GY+ HG G EA+ L+ M+ PN +TF+ +L ACS+ G
Sbjct: 464 LTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAG 523
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
L +G F M+ Y I P EH++C+V L R GQ + A +I ++ +P+ +W A+
Sbjct: 524 LLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRAL 583
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
LGAC I+ N LG++ A+ + +MEP+ +V+LSN+Y A WDN RK M+++ ++
Sbjct: 584 LGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVK 643
Query: 570 KNPGYSFLQS 579
K PG S++++
Sbjct: 644 KEPGLSWVEN 653
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 159/548 (29%), Positives = 278/548 (50%), Gaps = 25/548 (4%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D +Y ++LQ I + +H HI+ +G +L ++ Y G + A K
Sbjct: 1 MDSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKL 60
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD MP N VS+ + G++++ + A + + R G NQF +++ L+ M
Sbjct: 61 FDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLA 120
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ + K + FV +AL+D Y+ CG ++ A +F+ I KD+VSW M+
Sbjct: 121 DTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACY 180
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESS 266
A ++DS LF M G +P+ FT+ + L+ S G+E K+ + +H +K+ +
Sbjct: 181 AENYCHEDSLLLFCQMRIMGYRPNNFTISAALK-SCNGLEAFKVGKSVHGCALKVCYDRD 239
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ +L+++Y K G I A Q + M K D+I + +IS +A+ D SKEA +LF M
Sbjct: 240 LYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDK-SKEALELFCRMR 298
Query: 327 LKKMGI-DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ + ++ +L CA++ LNLG QIH+ K + V NAL+D+YAK GEI
Sbjct: 299 QSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEI 358
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
++ + F +KN ++W ++I GY + G G +A+ L+ M + P +VT+ S+L A
Sbjct: 359 ENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRAS 418
Query: 446 SHTGLTCEGWELFT----DMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
+ G ++ + M NK ++ + ++D++A+ G+++ A +M+ +
Sbjct: 419 ASLVALEPGRQIHSLTIKTMYNKDSVVANS-----LIDMYAKCGRIDDARLTFDKMDKQD 473
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDM------EPEKSVNYVVLSNIYTAAGAWDN 555
S W+A++ SI+G LG + A NLFDM +P K + +V + + + AG D
Sbjct: 474 EVS-WNALICGYSIHG---LG-MEALNLFDMMQQSNSKPNK-LTFVGVLSACSNAGLLDK 527
Query: 556 ARKTRKLM 563
R K M
Sbjct: 528 GRAHFKSM 535
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 183/555 (32%), Positives = 306/555 (55%), Gaps = 2/555 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY+ +L IH ++ G++ + ++ I Y K G V AR+ F
Sbjct: 296 DSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMF 355
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+M E +++SW +ISG A++G +E +L +F +LRSG+ +QFT +S LRAC+ +
Sbjct: 356 GQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESY 415
Query: 149 G-GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
GR + K V + FV +AL+D+Y+K G +E+A +LF + D+ SWNAM+ G
Sbjct: 416 CVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGF 475
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
+ ++ LF M +G K D T + +A+ + L + QIH ++IK+
Sbjct: 476 TVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDL 535
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ ++D+Y K G ++SA +++ + D ++ T +ISG ++ ++A + M L
Sbjct: 536 FVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCV-ENGEEEQALFTYHQMRL 594
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ D+ ++ C+ + +L G+QIHA K ++D V +L+DMYAK G I D
Sbjct: 595 AGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIED 654
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A F M ++V W ++I G A+HG EA+ + +MK G+ P+ VTF+ +L ACSH
Sbjct: 655 AYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSH 714
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
+GLT + ++ F M Y + P EH+SC+VD +R G ++ A ++ M + +A+++
Sbjct: 715 SGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYR 774
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
+L AC + G+ GE A LF M+P S YV+LSNIY AA W+NA R +M+ +
Sbjct: 775 TLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVN 834
Query: 568 LRKNPGYSFLQSSKK 582
++K PG+S++ K
Sbjct: 835 VKKEPGFSWIDMKNK 849
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/436 (29%), Positives = 230/436 (52%), Gaps = 4/436 (0%)
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
A K F + +V W +S Y Q G A+ F M++S V + TY L A
Sbjct: 250 ATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVAS 309
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
+ L+ G+ I G++ + + + + V ++ +++Y K G + A +F +++ D++SWN +
Sbjct: 310 LNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTV 369
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLG 262
I G A G + S LF ++R G+ PD FT+ S+LRA E + Q+H +K G
Sbjct: 370 ISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAG 429
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
+ + ++ +LIDVY+K G + A L+ + D+ S A++ GF DN+ +EA LF
Sbjct: 430 IVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNY-REALRLF 488
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
M + D + + L G+QIHA K + YD V + ++DMY K
Sbjct: 489 SLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKC 548
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
GE+ A + F+++ + ++WT++I+G ++G +A+ Y +M+ G+ P++ TF +L+
Sbjct: 549 GEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLV 608
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
ACS +G ++ +++ K + +VD++A+ G +E AY + R+MN +
Sbjct: 609 KACSLLTALEQGKQIHANIM-KLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSV 667
Query: 503 ASLWSAILGACSIYGN 518
A LW+A++ + +GN
Sbjct: 668 A-LWNAMIVGLAQHGN 682
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 141/539 (26%), Positives = 257/539 (47%), Gaps = 47/539 (8%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS 83
P +LL + S+L+ I HA I+T+G + +++ +I YAK G + S
Sbjct: 9 PSSLL--PQWFSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFS 66
Query: 84 ARKAFDRMPE--RNVVSWTAMISGYAQNG--YD----ENALLVFSAMLRSGVRANQFTYS 135
ARK FD P+ R++V++ A+++ YA G +D A +F + +S + + T S
Sbjct: 67 ARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLS 126
Query: 136 SALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERK 195
+ C +QG K ++FV AL+++YAK I +A +LF+R+ +
Sbjct: 127 PLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVR 186
Query: 196 DVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIH 255
DVV WN M+ G D+ LF + R G++PDC ++ +IL
Sbjct: 187 DVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL---------------- 230
Query: 256 DLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHS 315
+G+ L V A A +L+ +D+ +S + +
Sbjct: 231 -----MGVGKKTVFERELEQVRAY------ATKLFVCDDDSDVTVWNKTLSSYLQ-AGEG 278
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNAL 375
EA D F+DMI ++ D + ++L++ A++ L LG+QIH ++ +V N+
Sbjct: 279 WEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSA 338
Query: 376 IDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND 435
I+MY K+G + A R F +M + ++ISW ++I+G A+ G ++ L+ + G++P+
Sbjct: 339 INMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQ 398
Query: 436 VTFLSLLFACSHTGLT-CEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI 494
T S+L ACS + C G ++ T + K I+ + + ++D++++ G++E A +
Sbjct: 399 FTITSVLRACSSLEESYCVGRQVHTCAL-KAGIVLDSFVSTALIDVYSKGGKMEEAELLF 457
Query: 495 RQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEK--SVNYVVLSNIYTAAG 551
+ AS W+A++ ++ N A LF + E+ + + +N AAG
Sbjct: 458 HNQDGFDLAS-WNAMMHGFTVSDNYR----EALRLFSLMHERGEKADQITFANAAKAAG 511
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 181/537 (33%), Positives = 296/537 (55%), Gaps = 42/537 (7%)
Query: 62 ESNLHLSTKVIIFYAKVGDVL--------------------SARKAFDRMPERNVVSWTA 101
+ N++L ++ YAK+GD SA + FD++ +R+V+SW +
Sbjct: 24 KKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRSESASELFDKLCDRDVISWNS 83
Query: 102 MISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGR 161
MISGY NG E L ++ M+ G+ + T S L CA+ L G+ + K
Sbjct: 84 MISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSS 143
Query: 162 FVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFR 221
F + + LLD+Y+KCG ++ A +FE++ ++VVSW +MI G G++D + L +
Sbjct: 144 FERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQ 203
Query: 222 SMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYG 281
M ++G+K D + SIL A L +HD I + S+ + +L+D+YAK G
Sbjct: 204 QMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCG 263
Query: 282 SIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLML 341
S+ A ++ +M+ DIIS ++ ++ D + +L
Sbjct: 264 SMEGANSVFSTMVVKDIISWNTMVG----------------------ELKPDSRTMACIL 301
Query: 342 NICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVI 401
CA++++L G++IH + + S D V NAL+D+Y K G + A FD + K+++
Sbjct: 302 PACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLV 361
Query: 402 SWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM 461
SWT +IAGY HGYG+EAI + +M+ G+ P++V+F+S+L+ACSH+GL +GW F M
Sbjct: 362 SWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIM 421
Query: 462 INKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSL 521
N + I P+ EH++C+VDL +R G L AY I + I P A++W A+L C IY + L
Sbjct: 422 KNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIEL 481
Query: 522 GELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
E A +F++EPE + YV+L+NIY A W+ ++ R+ + ++ LRKNPG S+++
Sbjct: 482 AEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIE 538
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 189/384 (49%), Gaps = 24/384 (6%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D +T +S+L C +H+ I + +E ++ S ++ Y+K GD+ A +
Sbjct: 111 VDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRV 170
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F++M ERNVVSWT+MI+GY ++G+ + A+++ M + GV+ + +S L ACAR L
Sbjct: 171 FEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSL 230
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ + I+ NLFV +AL+D+YAKCG +E A +F + KD++SWN M+G L
Sbjct: 231 DNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGEL 290
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
KPD T+ IL A L + +IH I++ G S
Sbjct: 291 ---------------------KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDR 329
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ +L+D+Y K G + A L+ + D++S T +I+G+ + EA F +M
Sbjct: 330 HVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGM-HGYGNEAIATFNEMRD 388
Query: 328 KKMGIDDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ D+V +L C++ L G R + + ++D+ +++G ++
Sbjct: 389 AGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLS 448
Query: 387 DANRAFDEMG-DKNVISWTSLIAG 409
A + + + + W +L+ G
Sbjct: 449 KAYKFIETLPIAPDATIWGALLCG 472
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 6/203 (2%)
Query: 8 FKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHL 67
F T +K + ++ + D T +L C A + IH +I+ NGY S+ H+
Sbjct: 272 FSTMVVKDIISWNTMVGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHV 331
Query: 68 STKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV 127
+ ++ Y K G + AR FD +P +++VSWT MI+GY +GY A+ F+ M +G+
Sbjct: 332 ANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGI 391
Query: 128 RANQFTYSSALRACARMRWL-QGGRMIQGSIQKGRF--VENLFVKSALLDLYAKCGWIED 184
++ ++ S L AC+ L QG R I K F L + ++DL ++ G +
Sbjct: 392 EPDEVSFISILYACSHSGLLEQGWRFFY--IMKNDFNIEPKLEHYACMVDLLSRTGNLSK 449
Query: 185 AWILFERIE-RKDVVSWNAMIGG 206
A+ E + D W A++ G
Sbjct: 450 AYKFIETLPIAPDATIWGALLCG 472
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 24/198 (12%)
Query: 375 LIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
L+ YA G++ + R FD M KNV W +++ YAK G E+I L+K M +G+
Sbjct: 2 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI 494
S ELF + ++ I ++ ++ + G E +
Sbjct: 62 RSESAS---------------ELFDKLCDRDVI-----SWNSMISGYVSNGLTERGLGIY 101
Query: 495 RQM---NIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYV-VLSNIYTAA 550
+QM I + ++L C+ G SLG+ E+ +N+ L ++Y+
Sbjct: 102 KQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKC 161
Query: 551 GAWDNARKTRKLMEERSL 568
G D A + + M ER++
Sbjct: 162 GDLDGALRVFEKMGERNV 179
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 187/557 (33%), Positives = 312/557 (56%), Gaps = 5/557 (0%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS 83
P +DP L+ C + +H + + + +++ + + ++ Y K+G V
Sbjct: 62 PGLHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDE 121
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
F MP RNVVSWTA+I+G + GY++ AL FS M V + +T+SSAL+ACA
Sbjct: 122 GCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACAD 181
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
L GR I K F FV + L +Y KCG ++ LFE + ++DVVSW +
Sbjct: 182 SGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTI 241
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKL 261
I G +++ FR M + P+ FT +++ A++G IE + Q+H +I+
Sbjct: 242 IMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGE--QLHAHVIRR 299
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDL 321
GL S + S++ +Y+K + A +++ + + DIIS + +ISG+A+ +EAFD
Sbjct: 300 GLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQG-GCGEEAFDY 358
Query: 322 FKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
M + ++ +L++C N+A L G+Q+HA + V +ALI+MY+K
Sbjct: 359 LSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSK 418
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
G I +A++ FDE N++SWT++I GYA+HGY EAI+L+KK+ G+ P+ VTF+++
Sbjct: 419 CGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAV 478
Query: 442 LFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
L ACSH GL G+ F + ++I P +H+ C++DL R G+L A +MI+ M +
Sbjct: 479 LAACSHAGLVDLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQR 538
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRK 561
+WS +L AC I+G+ G+ AA + ++P +V ++ L+N+Y A G W A + RK
Sbjct: 539 DDVVWSTLLRACRIHGDVDCGKRAAEKILQLDPNCAVTHITLANMYAAKGKWKEAAEVRK 598
Query: 562 LMEERSLRKNPGYSFLQ 578
+M+ + + K PG+S+++
Sbjct: 599 MMKSKGVVKEPGWSWIK 615
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 239/480 (49%), Gaps = 35/480 (7%)
Query: 77 KVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAM-LRSGVRANQFTYS 135
K G + +AR+ FD+M +R+ +SWT +ISGY AL +FS M + G+ + F S
Sbjct: 13 KTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFILS 72
Query: 136 SALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERK 195
AL+AC + G + G K FV ++FV SAL+D+Y K G +++ I+F+ + +
Sbjct: 73 LALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLR 132
Query: 196 DVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIH 255
+VVSW A+I GL G+N ++ F M Q + D +T S L+A L +IH
Sbjct: 133 NVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIH 192
Query: 256 DLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHS 315
+K G + + + +L +Y K G + +L+ SM + D++S T +I +
Sbjct: 193 CQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQ-IGQE 251
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNAL 375
+ A F+ M + ++ +++ CA + + G Q+HA + +V N++
Sbjct: 252 ENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSI 311
Query: 376 IDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND 435
+ MY+K ++ A+ F + +++ISW+++I+GYA+ G G EA + M+ EG PN+
Sbjct: 312 MAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNE 371
Query: 436 VTFLSLLFACS-----------HTGLTCEGWELFT----DMINKY----------RILPR 470
F S+L C H + C G E T +IN Y +I
Sbjct: 372 FAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDE 431
Query: 471 AEH-----FSCVVDLFARRGQLESAYNMIRQM---NIKPTASLWSAILGACSIYGNTSLG 522
AE+ ++ +++ +A G + A ++ +++ ++P + + A+L ACS G LG
Sbjct: 432 AEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLG 491
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 129/279 (46%), Gaps = 35/279 (12%)
Query: 279 KYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK-MGIDDVIL 337
K G + +A QL+ ML+ D IS T +ISG+ N + EA LF M ++ + +D IL
Sbjct: 13 KTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMN-TTEALSLFSKMWVEPGLHMDPFIL 71
Query: 338 CLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD 397
L L C S++ G +H ++ K VG+AL+DMY K G++ + F EM
Sbjct: 72 SLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPL 131
Query: 398 KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWEL 457
+NV+SWT++IAG + GY EA+ + M + + + TF S L AC+ +G G E+
Sbjct: 132 RNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREI 191
Query: 458 FTDMINK---------------YRILPRAEHFSCVVDLFARR---------------GQL 487
+ K Y + ++ + + +R GQ
Sbjct: 192 HCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQE 251
Query: 488 ESAYNMIRQM---NIKPTASLWSAILGACSIYGNTSLGE 523
E+A R+M ++ P ++A++ C+ G GE
Sbjct: 252 ENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGE 290
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 13/146 (8%)
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
N ++ K+G + +A + FD+M ++ ISWT++I+GY EA+ L+ KM E +
Sbjct: 5 NLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGL 64
Query: 433 PNDVTFLSL-LFACSHT-----GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
D LSL L AC G + G+ + TD +N + S +VD++ + G+
Sbjct: 65 HMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFV------GSALVDMYMKIGK 118
Query: 487 LESAYNMIRQMNIKPTASLWSAILGA 512
++ + ++M ++ S W+AI+
Sbjct: 119 VDEGCIVFKEMPLRNVVS-WTAIIAG 143
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 204/607 (33%), Positives = 330/607 (54%), Gaps = 58/607 (9%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ +L+ C + + R +HA + +G+E N+ + ++ Y + G +AR+ F
Sbjct: 144 DHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVF 203
Query: 89 DRMPERNV---VSWTAMISGYAQNGYDENALLVFSAMLRS-GVRANQFTYSSALRACARM 144
D M ER V VSW ++++ Y Q G A+ +F M G+R + + + L ACA +
Sbjct: 204 DEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASV 263
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
G+ + G + E++FV +A++D+YAKCG +E+A +FER++ KDVVSWNAM+
Sbjct: 264 GAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMV 323
Query: 205 GGLAMQGFNDDSFWLF-----------------------------------RSMMRQGMK 229
G + G DD+ LF R M+ G +
Sbjct: 324 TGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSE 383
Query: 230 PDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLESSNK-----LTGSLIDVYAKYGS 282
P+ TL S+L AS G + K + H + L L+ ++ + +LID+Y+K S
Sbjct: 384 PNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKS 443
Query: 283 IRSAYQLYRSMLKTD--IISCTALISGFARDDNHSKEAFDLFKDMILKK---MGIDDVIL 337
++A ++ + D +++ T LI G A+ + EA +LF M+ M I
Sbjct: 444 PKAARAMFDLIPPKDRSVVTWTVLIGGNAQH-GEANEALELFSQMLQPDNFVMPNAFTIS 502
Query: 338 CLMLNICANVASLNLGRQIHAFAFKYQSSYDAA---VGNALIDMYAKSGEIADANRAFDE 394
C ++ CA + +L GRQIHA+ + + +++A V N LIDMY+KSG++ A FD
Sbjct: 503 CALM-ACARLGALRFGRQIHAYVLR--NRFESAMLFVANCLIDMYSKSGDVDAARVVFDN 559
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG 454
M +N +SWTSL+ GY HG G EA++++ +M+ +VP+ VTF+ +L+ACSH+G+ +G
Sbjct: 560 MHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQG 619
Query: 455 WELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACS 514
F M + ++P AEH++C+VDL +R G+L+ A +IR M +KPT ++W A+L AC
Sbjct: 620 INYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACR 679
Query: 515 IYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGY 574
+Y N LGE AA L ++E +Y +LSNIY A W + + R LM+ ++K PG
Sbjct: 680 VYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGC 739
Query: 575 SFLQSSK 581
S++Q K
Sbjct: 740 SWVQGRK 746
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 138/546 (25%), Positives = 248/546 (45%), Gaps = 68/546 (12%)
Query: 44 KAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM-PERNVVSW-TA 101
K+ A L H ++ G H T +I Y A R+ P + V W
Sbjct: 59 KSLASAELTHQQLLVQGLP---HDPTHIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQ 115
Query: 102 MISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGR 161
+I G+ E+ L ++ M R G R + +T+ L+AC + + G + +
Sbjct: 116 LIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASG 175
Query: 162 FVENLFVKSALLDLYAKCGWIEDAWILFERIERK---DVVSWNAMIGGLAMQGFNDDSFW 218
F N+FV + L+ +Y +CG E+A +F+ + + D+VSWN+++ G + +
Sbjct: 176 FEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMK 235
Query: 219 LFRSMMRQ-GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVY 277
+F M G++PD +L ++L A + Q+H ++ GL + +++D+Y
Sbjct: 236 MFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMY 295
Query: 278 AKYGSIRSAYQLYRSMLKTDIISCTALISGFAR----DD--------------------- 312
AK G + A +++ M D++S A+++G+++ DD
Sbjct: 296 AKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWS 355
Query: 313 ---------NHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY 363
EA D+F+ M+L + V L +L+ CA+ +L G++ H A K+
Sbjct: 356 AVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKW 415
Query: 364 -------QSSYDAAVGNALIDMYAKSGEIADANRAFDEMG--DKNVISWTSLIAGYAKHG 414
D V NALIDMY+K A FD + D++V++WT LI G A+HG
Sbjct: 416 ILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHG 475
Query: 415 YGHEAIELYKKMKHEG--MVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAE 472
+EA+EL+ +M ++PN T L AC+ G F I+ Y + R E
Sbjct: 476 EANEALELFSQMLQPDNFVMPNAFTISCALMACARLGAL-----RFGRQIHAYVLRNRFE 530
Query: 473 H-----FSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAAR 527
+C++D++++ G +++A + M+ + S W++++ YG GE A +
Sbjct: 531 SAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVS-WTSLMTG---YGMHGRGEEALQ 586
Query: 528 NLFDME 533
++M+
Sbjct: 587 IFYEMQ 592
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 180/548 (32%), Positives = 309/548 (56%), Gaps = 2/548 (0%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
S+++ C + +H ++ +G++ ++++ T +I FY+K G++ AR FD++ E+
Sbjct: 156 SVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEK 215
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
V+WT +I+GY + G +L +F+ M + V +++ SS L AC+ + +L+GG+ I
Sbjct: 216 TAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIH 275
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND 214
+ + ++ V + L+D Y KC ++ LF+++ K+++SW MI G F+
Sbjct: 276 AYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDW 335
Query: 215 DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLI 274
++ LF M R G KPD F S+L + L + Q+H IK LES + LI
Sbjct: 336 EAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLI 395
Query: 275 DVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD 334
D+YAK + A +++ M + ++IS A+I G++ + S EA +LF +M ++ ++
Sbjct: 396 DMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLS-EALELFHEMRVRLQKPNE 454
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE 394
++ +N+ASL G+Q H K + V NAL+DMYAK G I +A + F+
Sbjct: 455 FTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNS 514
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG 454
++V+ W S+I+ +A+HG EA+ ++++M EG+ PN VTF+++L ACSH G +G
Sbjct: 515 SIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDG 574
Query: 455 WELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACS 514
F M + I P EH++CVV L R G+L A I +M I+P A +W ++L AC
Sbjct: 575 LNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACR 633
Query: 515 IYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGY 574
I GN LG+ AA +P+ S +Y++LSNI+ + G W + +K R M+ + K PG
Sbjct: 634 IAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGR 693
Query: 575 SFLQSSKK 582
S+++ + K
Sbjct: 694 SWIEVNNK 701
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 173/556 (31%), Positives = 276/556 (49%), Gaps = 48/556 (8%)
Query: 14 KQALKFSLSC-PDTLL-DP-----------STYMSLLQFCIDKKAERQAHLIHAHIITNG 60
KQA FS S P LL +P + +LLQ I + +IH II +G
Sbjct: 20 KQAFNFSTSVSPQFLLQNPCLQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSG 79
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+S+ L+ +I +K V +AR FD+MP +N+++W++M+S Y+Q GY E AL+VF
Sbjct: 80 LQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFV 139
Query: 121 AMLR-SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
+ R SG N+F +S +RAC ++ ++ G + G + + F ++++V ++L+D Y+K
Sbjct: 140 DLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKN 199
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G IE+A ++F+++ K V+W +I G G + S LF M + PD + + S+L
Sbjct: 200 GNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVL 259
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
A L QIH +++ G E + LID Y K +++ +L+ M+ +II
Sbjct: 260 SACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNII 319
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
S T +ISG+ + ++ EA LF +M D +L C + +L GRQ+HA+
Sbjct: 320 SWTTMISGYMQ-NSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAY 378
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
K D V N LIDMYAKS + DA + FD M ++NVIS+ ++I GY+ EA
Sbjct: 379 TIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEA 438
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACS-----------HTGLTCEGWEL-------FTDM 461
+EL+ +M+ PN+ TF +L+ A S H L G + DM
Sbjct: 439 LELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDM 498
Query: 462 INKYRILPRAEH------------FSCVVDLFARRGQLESAYNMIRQM---NIKPTASLW 506
K + A ++ ++ A+ G+ E A M R+M I+P +
Sbjct: 499 YAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTF 558
Query: 507 SAILGACSIYGNTSLG 522
A+L ACS G G
Sbjct: 559 VAVLSACSHAGRVEDG 574
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 215/414 (51%), Gaps = 12/414 (2%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITNG 60
I+ K G+ +L+ +T + P Y+ S+L C + IHA+++ G
Sbjct: 223 IIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRG 282
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
E ++ + +I FY K V + RK FD+M +N++SWT MISGY QN +D A+ +F
Sbjct: 283 TEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFG 342
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M R G + + F +S L +C L+ GR + K + FVK+ L+D+YAK
Sbjct: 343 EMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSN 402
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+ DA +F+ + ++V+S+NAMI G + Q ++ LF M + KP+ FT +++
Sbjct: 403 LLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALIT 462
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
A+ L Q H+ ++K+GL+ +T +L+D+YAK GSI A +++ S + D++
Sbjct: 463 AASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVC 522
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA----SLNLGRQI 356
++IS A+ ++EA +F++M+ + + + V +L+ C++ LN +
Sbjct: 523 WNSMISTHAQ-HGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSM 581
Query: 357 HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAG 409
F K + + A V + + +SG++ +A ++M + I W SL++
Sbjct: 582 PGFGIKPGTEHYACV----VSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSA 631
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 204/607 (33%), Positives = 328/607 (54%), Gaps = 58/607 (9%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ +L+ C + + R +HA + +G+E N+ + ++ Y + G +AR+ F
Sbjct: 125 DHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVF 184
Query: 89 DRMPERNV---VSWTAMISGYAQNGYDENALLVFSAMLRS-GVRANQFTYSSALRACARM 144
D M ER V VSW ++++ Y Q G A+ +F M G+R + + + L ACA +
Sbjct: 185 DEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASV 244
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
G+ + G + E++FV +A++D+YAKCG +E+A +FER++ KDVVSWNAM+
Sbjct: 245 GAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMV 304
Query: 205 GGLAMQGFNDDSFWLF-----------------------------------RSMMRQGMK 229
G + G DD+ LF R M G +
Sbjct: 305 TGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSE 364
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIK--LGLESSNK-----LTGSLIDVYAKYGS 282
P+ TL S+L L+ + H IK L L+ ++ + +LID+Y+K S
Sbjct: 365 PNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKS 424
Query: 283 IRSAYQLYRSMLKTD--IISCTALISGFARDDNHSKEAFDLFKDMILKK---MGIDDVIL 337
++A ++ + D +++ T LI G A+ + EA +LF M+ M I
Sbjct: 425 PKAARAMFDLIPPKDRSVVTWTVLIGGNAQH-GEANEALELFSQMLQPDNFVMPNAFTIS 483
Query: 338 CLMLNICANVASLNLGRQIHAFAFKYQSSYDAA---VGNALIDMYAKSGEIADANRAFDE 394
C ++ CA + +L GRQIHA+ + + +++A V N LIDMY+KSG++ A FD
Sbjct: 484 CALM-ACARLGALRFGRQIHAYVLR--NRFESAMLFVANCLIDMYSKSGDVDAARVVFDN 540
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG 454
M +N +SWTSL+ GY HG G EA++++ +M+ G+VP+ VTF+ +L+ACSH+G+ +G
Sbjct: 541 MHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQG 600
Query: 455 WELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACS 514
F M + ++P AEH++C+VDL +R G+L+ A +IR M +KPT ++W A+L AC
Sbjct: 601 INYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACR 660
Query: 515 IYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGY 574
+Y N LGE AA L ++E +Y +LSNIY A W + + R LM+ ++K PG
Sbjct: 661 VYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGC 720
Query: 575 SFLQSSK 581
S++Q K
Sbjct: 721 SWVQGRK 727
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 139/546 (25%), Positives = 247/546 (45%), Gaps = 68/546 (12%)
Query: 44 KAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM-PERNVVSW-TA 101
K+ A LIH ++ G H T +I Y A R+ P + V W
Sbjct: 40 KSLASAELIHQQLLVQGLP---HDPTHIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQ 96
Query: 102 MISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGR 161
+I G+ E+ L ++ M R G R + +T+ L+AC + + G + +
Sbjct: 97 LIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASG 156
Query: 162 FVENLFVKSALLDLYAKCGWIEDAWILFERIERK---DVVSWNAMIGGLAMQGFNDDSFW 218
F N+FV + L+ +Y +CG E+A +F+ + + D+VSWN+++ G + +
Sbjct: 157 FEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMK 216
Query: 219 LFRSMMRQ-GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVY 277
+F M G++PD +L ++L A + Q+H ++ GL + +++D+Y
Sbjct: 217 MFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMY 276
Query: 278 AKYGSIRSAYQLYRSMLKTDIISCTALISGFAR----DD--------------------- 312
AK G + A +++ M D++S A+++G+++ DD
Sbjct: 277 AKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWS 336
Query: 313 ---------NHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY 363
EA D+F+ M L + V L +L+ CA +L G++ H A K+
Sbjct: 337 AVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKW 396
Query: 364 -------QSSYDAAVGNALIDMYAKSGEIADANRAFDEMG--DKNVISWTSLIAGYAKHG 414
D V NALIDMY+K A FD + D++V++WT LI G A+HG
Sbjct: 397 ILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHG 456
Query: 415 YGHEAIELYKKMKHEG--MVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAE 472
+EA+EL+ +M ++PN T L AC+ G F I+ Y + R E
Sbjct: 457 EANEALELFSQMLQPDNFVMPNAFTISCALMACARLGAL-----RFGRQIHAYVLRNRFE 511
Query: 473 H-----FSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAAR 527
+C++D++++ G +++A + M+ + S W++++ YG GE A +
Sbjct: 512 SAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVS-WTSLMTG---YGMHGRGEEALQ 567
Query: 528 NLFDME 533
++M+
Sbjct: 568 IFYEMQ 573
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 192/572 (33%), Positives = 311/572 (54%), Gaps = 3/572 (0%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPSTY--MSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K L +ALKF + D ++P Y LL+ C D+ R IH ++ +G+ +L
Sbjct: 112 KVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLF 171
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
T + YAK V ARK FDRMPER++VSW +++GY+QNG AL + + M
Sbjct: 172 AMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEEN 231
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
++ + T S L A + +R ++ G+ I G + F + + +AL+D+YAKCG ++ A
Sbjct: 232 LKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTAR 291
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+LF+ + ++VVSWN+MI ++ +F+ M+ +G+KP ++ L A
Sbjct: 292 LLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLG 351
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
+L + IH L ++L L+ + + SLI +Y K + +A ++ + I+S A+I
Sbjct: 352 DLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMIL 411
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
GFA++ EA + F M + + D ++ A ++ + + IH +
Sbjct: 412 GFAQN-GRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLD 470
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
+ V AL+DMYAK G I A FD M +++V +W ++I GY HG G A+EL+++M
Sbjct: 471 KNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEM 530
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
+ + PN VTFLS++ ACSH+GL G + F M Y I P +H+ +VDL R G+
Sbjct: 531 QKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGR 590
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
L A++ I QM +KP +++ A+LGAC I+ N + E A LF++ PE +V+L+NI
Sbjct: 591 LNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANI 650
Query: 547 YTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
Y AA W+ + R M + LRK PG S ++
Sbjct: 651 YRAASMWEKVGQVRVSMLRQGLRKTPGCSMVE 682
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 135/501 (26%), Positives = 259/501 (51%), Gaps = 20/501 (3%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
LL+ C K R I I NG TK++ + + G V A + F+ + ++
Sbjct: 43 LLERCSSLKELRH---ILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKL 99
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG 155
V + M+ G+A+ + AL F M V + ++ L+ C L+ G+ I G
Sbjct: 100 NVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD 215
+ K F +LF + L ++YAKC + +A +F+R+ +D+VSWN ++ G + G
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARM 219
Query: 216 SFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI-SQIHDLIIKLGLESSNKLTGSLI 274
+ + M + +KP T+ S+L A V + L++I +IH ++ G +S + +L+
Sbjct: 220 ALEMVNLMCEENLKPSFITIVSVLPA-VSALRLIRIGKEIHGYAMRAGFDSLVNIATALV 278
Query: 275 DVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD 334
D+YAK GS+++A L+ ML+ +++S ++I + +++N KEA +F+ M+ + + D
Sbjct: 279 DMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNEN-PKEAMVIFQKMLDEGVKPTD 337
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE 394
V + L+ CA++ L GR IH + + + + +V N+LI MY K E+ A F +
Sbjct: 338 VSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGK 397
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG 454
+ + ++SW ++I G+A++G EA+ + +M+ + P+ T++S++ A + +T
Sbjct: 398 LQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHA 457
Query: 455 -W---ELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
W + + ++K + A +VD++A+ G + A +I M + + W+A++
Sbjct: 458 KWIHGVVMRNCLDKNVFVTTA-----LVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMI 511
Query: 511 GACSIYGNTSLGELAARNLFD 531
YG +G+ AA LF+
Sbjct: 512 DG---YGTHGIGK-AALELFE 528
>gi|302805550|ref|XP_002984526.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
gi|300147914|gb|EFJ14576.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
Length = 792
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 188/560 (33%), Positives = 323/560 (57%), Gaps = 18/560 (3%)
Query: 24 PDTLLDPSTYMSLLQFC---IDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGD 80
PD++ T+ S L C +D KA IHA I+++ ES+ + + +I YA+ GD
Sbjct: 245 PDSI----TFTSALLACTKLVDGKA------IHARIVSSNMESDF-VGSALINMYARCGD 293
Query: 81 VLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRA 140
V SAR+AF+++ ++VV WT++++ Y Q + AL ++ M GV A+ TY +AL A
Sbjct: 294 VSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHADGVTYVTALGA 353
Query: 141 CARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI-ERKDVVS 199
CA + L+ G+ I + + F ++L V +ALL +YAKCG ++ A +F R+ ++++V
Sbjct: 354 CASLGALKEGKAIHSRVFECGF-QSLVVHTALLTMYAKCGELDAARAVFNRVRQKRNVYC 412
Query: 200 WNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLII 259
W AMI A G ++ L+ M+ +G +P+ +T ++L A +L +IH +
Sbjct: 413 WTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGDLEAGMKIHGHVE 472
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
L S+ + +L+ +YAK GS+ A + + + D++S A+I +A+ +EA
Sbjct: 473 NSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQH-GLGREAL 531
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDA-AVGNALIDM 378
DL++ M + + D+V + L+ CA SL LGR+IH+ K QS + V AL++M
Sbjct: 532 DLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFRSSLMVQTALVNM 591
Query: 379 YAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTF 438
Y + G + A F++MG ++V+SWT++ + YA+ G+ + ++LY +M G+ PN++TF
Sbjct: 592 YGRCGRLETARSMFEDMGQRDVLSWTAMTSAYAQQGHADQVLDLYLEMVLHGIRPNEITF 651
Query: 439 LSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMN 498
S+L CSH GL G E F +M +++ ++P EHF C+VDL R G+L A ++ M
Sbjct: 652 TSILVGCSHAGLLARGVECFLEMQSEHEVVPIREHFLCMVDLLGRSGRLRDAEALVESMP 711
Query: 499 IKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARK 558
+P + W +LG+C + + + AAR + +++PE + Y +LS+I+TAAG A +
Sbjct: 712 YQPDSVAWLTVLGSCKTHSDADTAKRAARRVKELDPENTSLYSLLSSIFTAAGLPQEALE 771
Query: 559 TRKLMEERSLRKNPGYSFLQ 578
+ M+E L+K PG S ++
Sbjct: 772 VQLSMKEMGLKKPPGQSLIE 791
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 156/493 (31%), Positives = 261/493 (52%), Gaps = 10/493 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGY--ESNLHLSTKVIIFYAKVGDVLSARK 86
D TY +L C + R+A IHA II NL L ++ Y K G V ARK
Sbjct: 143 DKITYFIVLGSCSAVGSLREAREIHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARK 202
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FD + R+ VSWT+MIS YA NG+ + AL ++ M G++ + T++SAL AC +
Sbjct: 203 VFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSITFTSALLACTK--- 259
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
L G+ I I +E+ FV SAL+++YA+CG + A FE+I+ K VV W +++
Sbjct: 260 LVDGKAIHARIVSSN-MESDFVGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTA 318
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
++ L+ M +G+ D T + L A L + IH + + G +S
Sbjct: 319 YVQTCHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHSRVFECGFQSL 378
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC-TALISGFARDDNHSKEAFDLFKDM 325
T +L+ +YAK G + +A ++ + + + C TA+IS +A+ H++EA +L+ M
Sbjct: 379 VVHT-ALLTMYAKCGELDAARAVFNRVRQKRNVYCWTAMISAYAQ-AGHTQEALELYDQM 436
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ + ++ +L C++ L G +IH + + + AV NAL+ MYAK G +
Sbjct: 437 VAEGTRPNEYTFSNVLAACSSSGDLEAGMKIHGHVENSELASNVAVQNALVTMYAKCGSL 496
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A AF+ G K+++SW ++I YA+HG G EA++LY+ M +G++P++VT S L AC
Sbjct: 497 ELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSAC 556
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
+ +G G E+ + ++ + +V+++ R G+LE+A +M M + S
Sbjct: 557 AISGSLQLGREIHSRVLKNQSFRSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLS- 615
Query: 506 WSAILGACSIYGN 518
W+A+ A + G+
Sbjct: 616 WTAMTSAYAQQGH 628
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 154/491 (31%), Positives = 258/491 (52%), Gaps = 16/491 (3%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y LLQ C + + L+H H++ G+ N L +I Y G++ AR AF
Sbjct: 45 YDELLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFA 104
Query: 93 E-RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
+ V + M+S Y +NG AL ++ M G ++ TY L +C+ + L+ R
Sbjct: 105 SIKAVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAR 164
Query: 152 MIQGSIQKGRFV--ENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
I SI + + +NL +++AL+++Y KCG +E+A +F+ I+ +D VSW +MI A
Sbjct: 165 EIHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYAN 224
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
GF D++ L++ M G++PD T S L A +L+ IH I+ +E S+ +
Sbjct: 225 NGFCDEALDLYQQMDADGIQPDSITFTSALLACT---KLVDGKAIHARIVSSNME-SDFV 280
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+LI++YA+ G + SA Q + + ++ T+L++ + + H +EA DL+ M +
Sbjct: 281 GSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQ-TCHYREALDLYGRMDHEG 339
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFK--YQSSYDAAVGNALIDMYAKSGEIAD 387
+ D V L CA++ +L G+ IH+ F+ +QS V AL+ MYAK GE+
Sbjct: 340 VHADGVTYVTALGACASLGALKEGKAIHSRVFECGFQS---LVVHTALLTMYAKCGELDA 396
Query: 388 ANRAFDEMGDK-NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A F+ + K NV WT++I+ YA+ G+ EA+ELY +M EG PN+ TF ++L ACS
Sbjct: 397 ARAVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACS 456
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
+G G ++ + N + + +V ++A+ G LE A + K S W
Sbjct: 457 SSGDLEAGMKIHGHVENS-ELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVS-W 514
Query: 507 SAILGACSIYG 517
+A++GA + +G
Sbjct: 515 NAMIGAYAQHG 525
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 187/583 (32%), Positives = 328/583 (56%), Gaps = 4/583 (0%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPSTY--MSLLQFCIDKKAERQAHLIHAHIITN 59
+I+ A GQ +AL + +TY ++ LQ C D ++ IHA I+ +
Sbjct: 82 SIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKS 141
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
+++++ ++ + + G + A + FD + E++ ++W +MI+G+ QNG AL F
Sbjct: 142 NQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFF 201
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
+ + ++ ++ + S L A R+ +L G+ I K NL + + L+D+Y+KC
Sbjct: 202 CGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKC 261
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
+ A ++F+++ KD++SW +I A + ++ L R + +GM D +GS L
Sbjct: 262 CCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTL 321
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
A G L ++H +K GL S + +IDVYA G+I A +++ S+ D++
Sbjct: 322 LACSGLRCLSHAKEVHGYTLKRGL-SDLMMQNMIIDVYADCGNINYATRMFESIKCKDVV 380
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
S T++IS + + + EA +F M + D + L +L+ A++++LN G++IH F
Sbjct: 381 SWTSMISCYVHN-GLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGF 439
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
F+ + + N+L+DMYA G + +A + F K+++ WT++I Y HG G A
Sbjct: 440 IFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAA 499
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD 479
+EL+ M+ + ++P+ +TFL+LL+ACSH+GL EG L M KY++ P EH++C+VD
Sbjct: 500 VELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVD 559
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVN 539
L R LE AY+ ++ M I+PTA +W A LGAC I+ N LGE+AA+ L D++P+ +
Sbjct: 560 LLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGS 619
Query: 540 YVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
YV++SN++ A+G W + + R M+ L+KNPG S+++ K
Sbjct: 620 YVLISNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNK 662
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 161/512 (31%), Positives = 278/512 (54%), Gaps = 8/512 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
D T+ +L+ C + + IH II GY+S + ++ ++ YAK D+L ARK
Sbjct: 8 FDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKL 67
Query: 88 FDRMPERN-VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FDRM ERN VVSW ++IS Y+ NG AL +F M ++GV AN +T +AL+AC +
Sbjct: 68 FDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSF 127
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
+ G I +I K V +++V +AL+ ++ + G + A +F+ ++ KD ++WN+MI G
Sbjct: 128 KKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAG 187
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
G +++ F + +KPD +L SIL AS L+ +IH +K L+S+
Sbjct: 188 FTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSN 247
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
++ +LID+Y+K + A ++ M+ D+IS T +I+ +A+++ H+ EA L + +
Sbjct: 248 LRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHT-EALKLLRKVQ 306
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
K M +D +++ L C+ + L+ +++H + K S D + N +ID+YA G I
Sbjct: 307 TKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLS-DLMMQNMIIDVYADCGNIN 365
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A R F+ + K+V+SWTS+I+ Y +G +EA+ ++ MK + P+ +T +S+L A +
Sbjct: 366 YATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAA 425
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
+G E+ + K +L + +VD++A G LE+AY + K LW
Sbjct: 426 SLSALNKGKEIHGFIFRKGFML-EGSTVNSLVDMYACCGSLENAYKVFICTRSKSLV-LW 483
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSV 538
+ ++ A YG G+ A ME +K +
Sbjct: 484 TTMINA---YGMHGRGKAAVELFSIMEDQKLI 512
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 214/414 (51%), Gaps = 9/414 (2%)
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
GV + FT+ L+AC + + G I G I K + +FV ++L+ +YAKC I A
Sbjct: 5 GVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGA 64
Query: 186 WILFERI-ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG 244
LF+R+ ER DVVSWN++I ++ G ++ LFR M + G+ + +TL + L+A
Sbjct: 65 RKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACED 124
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
+IH I+K + +L+ ++ ++G + A +++ + + D I+ ++
Sbjct: 125 SSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSM 184
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
I+GF ++ ++ EA F + + D+V L +L + L G++IHA+A K
Sbjct: 185 IAGFTQNGLYN-EALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNW 243
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
+ +GN LIDMY+K +A A FD+M +K++ISWT++IA YA++ EA++L +
Sbjct: 244 LDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLR 303
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
K++ +GM + + S L ACS GL C R L + ++D++A
Sbjct: 304 KVQTKGMDVDTMMIGSTLLACS--GLRCLSHAKEVHGYTLKRGLSDLMMQNMIIDVYADC 361
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIY---GNTSLGELAARNLFDMEPE 535
G + A M + K S W++++ +C ++ N +LG +EP+
Sbjct: 362 GNINYATRMFESIKCKDVVS-WTSMI-SCYVHNGLANEALGVFYLMKETSVEPD 413
>gi|255574235|ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532562|gb|EEF34350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 730
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 195/570 (34%), Positives = 313/570 (54%), Gaps = 37/570 (6%)
Query: 44 KAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMI 103
K+ Q +H II+ G+E + + K++ FY + A + + + W +I
Sbjct: 107 KSLSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNLLI 166
Query: 104 SGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFV 163
S Y +NG AL + M G+R ++FTY S L+AC + G+ + SI
Sbjct: 167 SSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINASCLG 226
Query: 164 ENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM 223
NLFV ++L+ +YAK G + A LFE + +D VSWN MI G A +G ++F LF M
Sbjct: 227 WNLFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFGKM 286
Query: 224 MRQGMKPDCFTLGSILRASVG-----------------GIELMKISQI-------HDLII 259
+G++ + T +I V GI++ ++ I H I
Sbjct: 287 RVEGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIGAI 346
Query: 260 KLGLE-----------SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGF 308
KLG E + + +LI +Y++ +R AY L++S +II+ +++SG+
Sbjct: 347 KLGREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSGY 406
Query: 309 ARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYD 368
D S+EA LF++M+L + + V + +L +CA VA+L G++ H + + D
Sbjct: 407 THMDR-SEEASFLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKD 465
Query: 369 -AAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMK 427
+ N+L+DMYA+SG++ +A R FD + ++ +++TSLIAGY G G EA++L+ +MK
Sbjct: 466 YLLLWNSLVDMYARSGKVLEAKRLFDSISRRDEVTYTSLIAGYGIQGEGREALKLFDEMK 525
Query: 428 HEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQL 487
+ P+ VT +++L ACSH+GL EG +LF M + Y I+PR EHF+C+VDLF R G L
Sbjct: 526 KRHIKPDHVTMVAVLSACSHSGLVTEGIKLFELMPSAYGIIPRLEHFACMVDLFGRAGLL 585
Query: 488 ESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIY 547
A MI +M +P++++W+ +LGAC I+GN +GE AA L +M PE S YV+++N+Y
Sbjct: 586 HKAKEMITRMPYRPSSAMWATLLGACRIHGNAEIGEWAAEKLLEMRPENSGYYVLIANMY 645
Query: 548 TAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
AAG W K R M + +RK PG +++
Sbjct: 646 AAAGCWSKLAKVRTYMRDLGVRKAPGCAWV 675
>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 188/539 (34%), Positives = 302/539 (56%), Gaps = 6/539 (1%)
Query: 42 DKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTA 101
D +A RQAH A + ++ ++ ++ Y K G V AR FD MPERN VSW
Sbjct: 131 DSRAGRQAH---ALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWAT 187
Query: 102 MISGYAQNGYDENALLVFSAMLRS--GVRANQFTYSSALRACARMRWLQGGRMIQGSIQK 159
MISGYA + A +F M G N+F ++S L A + GR + K
Sbjct: 188 MISGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMK 247
Query: 160 GRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWL 219
V + V +AL+ +Y KCG +EDA FE K+ ++W+AM+ G A G +D + L
Sbjct: 248 NGLVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKL 307
Query: 220 FRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAK 279
F M + G P FTL ++ A +++ Q+H +KLG E + +L+D+YAK
Sbjct: 308 FYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAK 367
Query: 280 YGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCL 339
GSI A + + + + D++ T++I+G+ ++ ++ + A +L+ M L + +D+ +
Sbjct: 368 CGSIVDARKGFECIQQPDVVLWTSIITGYVQNGDY-EGALNLYGKMQLGGVIPNDLTMAS 426
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN 399
+L C+N+A+L+ G+Q+HA KY S + +G+AL MYAK G + D R F M ++
Sbjct: 427 VLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARD 486
Query: 400 VISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFT 459
VISW ++I+G +++G G+E +EL++KM EG P++VTF++LL ACSH GL GW F
Sbjct: 487 VISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWVYFK 546
Query: 460 DMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNT 519
M +++ I P EH++C+VD+ +R G+L A I + LW +L A + +
Sbjct: 547 MMFDEFNIAPTVEHYACMVDILSRAGKLHEAKEFIESATVDHGLCLWRILLAASKNHRDY 606
Query: 520 SLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
LG A L ++ +S YV+LS+IYTA G W++ + R +M+ R + K PG S+++
Sbjct: 607 DLGAYAGEKLMELGSLESSAYVLLSSIYTALGKWEDVERVRGMMKARGVTKEPGCSWIE 665
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 151/535 (28%), Positives = 258/535 (48%), Gaps = 11/535 (2%)
Query: 37 LQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNV 96
L C K R+ +HA I+ G S+ ++ +I YAK A FD + ++V
Sbjct: 17 LVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDV 76
Query: 97 VSWTAMISGYAQNGYDENALLVFS-----AMLRSGVRANQFTYSSALRACARMRWLQGGR 151
VSW +I+ ++Q +L V M + N T + A + + + GR
Sbjct: 77 VSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGR 136
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
K ++F S+LL++Y K G + +A LF+ + ++ VSW MI G A Q
Sbjct: 137 QAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQE 196
Query: 212 FNDDSFWLFRSMMRQ--GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
D++F LF+ M + G + F S+L A + + Q+H L +K GL +
Sbjct: 197 LADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSV 256
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+L+ +Y K GS+ A + + + I+ +A+++GFA+ + S +A LF DM
Sbjct: 257 ANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGD-SDKALKLFYDMHQSG 315
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ L ++N C++ ++ GRQ+H ++ K V +AL+DMYAK G I DA
Sbjct: 316 ELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDAR 375
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
+ F+ + +V+ WTS+I GY ++G A+ LY KM+ G++PND+T S+L ACS+
Sbjct: 376 KGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLA 435
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
+G ++ +I KY S + ++A+ G L+ Y + +M + S W+A+
Sbjct: 436 ALDQGKQMHAGII-KYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVIS-WNAM 493
Query: 510 LGACSIYGNTSLG-ELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
+ S G + G EL + + +V +V L + + G D K+M
Sbjct: 494 ISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWVYFKMM 548
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 204/413 (49%), Gaps = 26/413 (6%)
Query: 137 ALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKD 196
AL C R + L+ GR + I + + ++L++LYAKC A ++F+ I KD
Sbjct: 16 ALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKD 75
Query: 197 VVSWNAMIGGLAMQGFNDDSF---WLFRS--MMRQGMKPDCFTLGSILRASVGGIELMKI 251
VVSWN +I + Q + S LFR M + + P+ TL + A+ +
Sbjct: 76 VVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAG 135
Query: 252 SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD 311
Q H L +K SL+++Y K G + A L+ M + + +S +ISG+A
Sbjct: 136 RQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQ 195
Query: 312 DNHSKEAFDLFKDMILKKMGI--DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDA 369
+ + EAF+LFK M ++ G ++ + +L+ +N GRQ+H+ A K
Sbjct: 196 E-LADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIV 254
Query: 370 AVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE 429
+V NAL+ MY K G + DA + F+ G+KN I+W++++ G+A+ G +A++L+ M
Sbjct: 255 SVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQS 314
Query: 430 GMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLES 489
G +P++ T + ++ ACS EG ++ + K + S +VD++A+ G +
Sbjct: 315 GELPSEFTLVGVINACSDACAIVEGRQMHGYSL-KLGYELQLYVLSALVDMYAKCGSIVD 373
Query: 490 A---YNMIRQMNIKPTASLWSAIL----------GACSIYGNTSLGELAARNL 529
A + I+Q P LW++I+ GA ++YG LG + +L
Sbjct: 374 ARKGFECIQQ----PDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDL 422
>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Vitis vinifera]
Length = 836
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 190/529 (35%), Positives = 301/529 (56%), Gaps = 5/529 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H +I ++ + ++ T ++ YAK G V A+K FD++ ++ V AMIS + NG
Sbjct: 266 VHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGR 325
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+AL +++ M + FT SS L C+ + GR + + K N+ ++SA
Sbjct: 326 AYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSA 385
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
LL +Y KCG EDA +F ++ +DVV+W +MI G D+ LFR+M ++G+K D
Sbjct: 386 LLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKAD 445
Query: 232 CFTLGSILRASVG--GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
+ S++ A +G +EL + IH IK GLES + SL+D+Y+K+G SA +
Sbjct: 446 SDVMTSVISAGLGLENVELGHL--IHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMV 503
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ SM ++++ ++IS ++ + + + +L ++ +D V + +L ++VA+
Sbjct: 504 FSSMPNKNLVAWNSMISCYSWN-GLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAA 562
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
L G+ +HA+ + Q D V NALIDMY K G + A F+ M +N+++W S+IAG
Sbjct: 563 LLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAG 622
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
Y HG EA+ L+K+MK P++VTFL+L+ +CSH+G+ EG LF M +Y + P
Sbjct: 623 YGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEP 682
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
R EH++ VVDL R G+L+ AY+ IR M I S+W +L AC + N LGEL A NL
Sbjct: 683 RMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNL 742
Query: 530 FDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
MEP + NYV L N+Y WD A R M+ R L+K+PG S+++
Sbjct: 743 LKMEPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWIE 791
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 146/534 (27%), Positives = 258/534 (48%), Gaps = 41/534 (7%)
Query: 4 VRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGY 61
++A + G+ QAL+ P + L + T+ SLL+ C IHA I+T G
Sbjct: 27 IKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGL 86
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER-----NVVSWTAMISGYAQNGYDENAL 116
+S+ +++T +I Y K G + SA + FD+M E ++ W +I GY + G+ E L
Sbjct: 87 QSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGL 146
Query: 117 LVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLY 176
F M + W GR I G I + F + ++++AL+ +Y
Sbjct: 147 AQFCRM-------------------QELSWYMAGRQIHGYIIRNMFEGDPYLETALIGMY 187
Query: 177 AKCGWIEDAWILFERIE-RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTL 235
+ C +AW LF ++E R ++V+WN MIGG G + S L+ + K +
Sbjct: 188 SSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASF 247
Query: 236 GSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLK 295
A G L Q+H +IK+ + + SL+ +YAK GS+ A +++ +L
Sbjct: 248 TGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLD 307
Query: 296 TDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQ 355
++ A+IS F + + +A L+ M + +D + +L+ C+ V S + GR
Sbjct: 308 KEVELRNAMISAFI-GNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRT 366
Query: 356 IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGY 415
+HA K + A+ +AL+ MY K G DA+ F M +++V++W S+IAG+ ++
Sbjct: 367 VHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRR 426
Query: 416 GHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRI---LPRAE 472
+A++L++ M+ EG+ + S++ A GL E EL +I+ + I L
Sbjct: 427 FKDALDLFRAMEKEGVKADSDVMTSVISA----GLGLENVEL-GHLIHGFAIKRGLESDV 481
Query: 473 HFSC-VVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
+C +VD++++ G ESA + M K + W++++ S Y L E++
Sbjct: 482 FVACSLVDMYSKFGFAESAEMVFSSMPNKNLVA-WNSMI---SCYSWNGLPEMS 531
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/491 (27%), Positives = 246/491 (50%), Gaps = 16/491 (3%)
Query: 36 LLQFCIDKK-----AERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
L QFC ++ A RQ IH +II N +E + +L T +I Y+ + A F +
Sbjct: 146 LAQFCRMQELSWYMAGRQ---IHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGK 202
Query: 91 MPER-NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG 149
+ R N+V+W MI G+ +NG E +L ++S + +++ A AC+ L
Sbjct: 203 LENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDF 262
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
GR + + K F ++ +V ++LL +YAK G +EDA +F+++ K+V NAMI
Sbjct: 263 GRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIG 322
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS--VGGIELMKISQIHDLIIKLGLESSN 267
G D+ L+ M D FT+ S+L VG + + +H +IK ++S+
Sbjct: 323 NGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRT--VHAEVIKRSMQSNV 380
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ +L+ +Y K GS A ++ +M + D+++ ++I+GF ++ K+A DLF+ M
Sbjct: 381 AIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRF-KDALDLFRAMEK 439
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ + D ++ +++ + ++ LG IH FA K D V +L+DMY+K G
Sbjct: 440 EGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAES 499
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A F M +KN+++W S+I+ Y+ +G +I L ++ G + V+ ++L A S
Sbjct: 500 AEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSS 559
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
+G L I + +I + + ++D++ + G L+ A + M + + W+
Sbjct: 560 VAALLKGKTLHAYQI-RLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVT-WN 617
Query: 508 AILGACSIYGN 518
+++ +GN
Sbjct: 618 SMIAGYGSHGN 628
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 144/281 (51%), Gaps = 2/281 (0%)
Query: 49 AHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQ 108
HLIH I G ES++ ++ ++ Y+K G SA F MP +N+V+W +MIS Y+
Sbjct: 465 GHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSW 524
Query: 109 NGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFV 168
NG E ++ + +L+ G + + ++ L A + + L G+ + + + +L V
Sbjct: 525 NGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQV 584
Query: 169 KSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGM 228
++AL+D+Y KCG ++ A ++FE + R+++V+WN+MI G G +++ LF+ M R
Sbjct: 585 ENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSET 644
Query: 229 KPDCFT-LGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
PD T L I S G+ ++ + I+ G+E + S++D+ + G + AY
Sbjct: 645 APDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAY 704
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
R M D L FA + + E +L D +LK
Sbjct: 705 SFIRGM-PIDADRSVWLCLLFACRAHRNMELGELVADNLLK 744
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 182/425 (42%), Gaps = 33/425 (7%)
Query: 98 SWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSI 157
S + I Q G AL + S S + +FT+ S L+ CA + L GR I SI
Sbjct: 22 SINSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASI 81
Query: 158 QKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER-----KDVVSWNAMIGGLAMQGF 212
+ ++ ++L+++Y KCG + A +F+++ D+ WN +I G G
Sbjct: 82 VTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGH 141
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS 272
++ F M M QIH II+ E L +
Sbjct: 142 FEEGLAQFCRMQELSW-------------------YMAGRQIHGYIIRNMFEGDPYLETA 182
Query: 273 LIDVYAKYGSIRSAYQLYRSML-KTDIISCTALISGFARDD--NHSKEAFDLFKDMILKK 329
LI +Y+ A+ L+ + +++I++ +I GF + S E + L K+ K
Sbjct: 183 LIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKL 242
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ C++ L+ GRQ+H K D V +L+ MYAKSG + DA
Sbjct: 243 VSAS---FTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAK 299
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND-VTFLSLLFACSHT 448
+ FD++ DK V ++I+ + +G ++A+ LY KMK G P D T SLL CS
Sbjct: 300 KVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMK-AGETPVDSFTISSLLSGCSVV 358
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
G G + ++I K + S ++ ++ + G E A ++ M + + S
Sbjct: 359 GSYDFGRTVHAEVI-KRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSM 417
Query: 509 ILGAC 513
I G C
Sbjct: 418 IAGFC 422
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 183/550 (33%), Positives = 291/550 (52%), Gaps = 1/550 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T SLL C ++ +H++++ G + ++ Y K GD+ +A F
Sbjct: 244 DCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIF 303
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ NVV W M+ Y Q + +F M +G+ N+FTY LR C ++
Sbjct: 304 NLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIE 363
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G I K F +++V L+D+Y+K ++ A + E +E++DVVSW +MI G
Sbjct: 364 LGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYV 423
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
F +++ F+ M G+ PD L S A G + + QIH + G +
Sbjct: 424 QHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADIS 483
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +L+++YA+ G A+ L+R + D I+ LISGF + + ++A +F M
Sbjct: 484 IWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLY-EQALMVFMKMSQA 542
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ ++ AN+A + G+Q+H A K + + V NALI +Y K G I DA
Sbjct: 543 GAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDA 602
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
F EM +N +SW ++I ++HG G EA++L+ +MK EG+ PNDVTF+ +L ACSH
Sbjct: 603 KMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHV 662
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
GL EG F M N Y + P +H++CVVD+ R GQL+ A + +M I A +W
Sbjct: 663 GLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRT 722
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L AC ++ N +GELAA++L ++EP S +YV+LSN Y G W N + RK+M++R +
Sbjct: 723 LLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGI 782
Query: 569 RKNPGYSFLQ 578
RK PG S+++
Sbjct: 783 RKEPGRSWIE 792
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 160/527 (30%), Positives = 265/527 (50%), Gaps = 13/527 (2%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ G K+A + T + P+ Y+ S+L C K Q +IHA + + S
Sbjct: 121 QRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETF 180
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ +I Y G A + F M + V++ +ISG+AQ G+ E AL +F M SG
Sbjct: 181 VGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSG 240
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
+R + T +S L ACA + LQ G+ + + K + + +LLDLY KCG IE A
Sbjct: 241 LRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAH 300
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVG 244
+F +R +VV WN M+ SF +F M G+ P+ FT ILR G
Sbjct: 301 DIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTG 360
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
IEL + QIH L IK G ES ++G LID+Y+KY + A ++ + K D++S T++
Sbjct: 361 QIELGE--QIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSM 418
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
I+G+ + D +EA FK+M + D++ L + CA + ++ G QIHA +
Sbjct: 419 IAGYVQHD-FCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSG 477
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
+ D ++ N L+++YA+ G +A F E+ K+ I+W LI+G+ + +A+ ++
Sbjct: 478 YAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFM 537
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
KM G N TF+S + A ++ +G ++ + K E + ++ L+ +
Sbjct: 538 KMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAV-KTGHTSETEVANALISLYGKC 596
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
G +E A + +M+++ S W+ I+ +CS +G L A +LFD
Sbjct: 597 GSIEDAKMIFSEMSLRNEVS-WNTIITSCSQHGRG----LEALDLFD 638
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 139/475 (29%), Positives = 245/475 (51%), Gaps = 8/475 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IHA + G ++ + +I YAK G V AR+ F + R+ VSW AM+SGYAQ G
Sbjct: 65 IHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGL 124
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ A ++S M + V + SS L AC + + GRMI + K F FV +A
Sbjct: 125 GKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNA 184
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+ LY G + A +F + D V++N +I G A G + + +F M G++PD
Sbjct: 185 LIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPD 244
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
C T+ S+L A +L K Q+H ++K G+ GSL+D+Y K G I +A+ ++
Sbjct: 245 CVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFN 304
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
+T+++ ++ + + + +K +F++F M + + +L C +
Sbjct: 305 LGDRTNVVLWNLMLVAYGQISDLAK-SFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIE 363
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
LG QIH+ + K D V LIDMY+K + A + + + ++V+SWTS+IAGY
Sbjct: 364 LGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYV 423
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM-INKYRILPR 470
+H + EA+ +K+M+ G+ P+++ S AC+ +G ++ + ++ Y
Sbjct: 424 QHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYA--AD 481
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
++ +V+L+AR G+ E A+++ R+++ K + W+ ++ S +G + L E A
Sbjct: 482 ISIWNTLVNLYARCGRSEEAFSLFREIDHKDEIT-WNGLI---SGFGQSRLYEQA 532
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 168/358 (46%), Gaps = 47/358 (13%)
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR 310
+ +IH + GL + + LID+YAK G + A Q+++ + D +S A++SG+A+
Sbjct: 62 VLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQ 121
Query: 311 DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA 370
KEAF L+ M + +L +L+ C GR IHA +K +
Sbjct: 122 -RGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETF 180
Query: 371 VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG 430
VGNALI +Y G A R F +M + +++ +LI+G+A+ G+G A++++ +M+ G
Sbjct: 181 VGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSG 240
Query: 431 MVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA 490
+ P+ VT SLL AC+ G +G +L + ++ S ++DL+ + G +E+A
Sbjct: 241 LRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGS-LLDLYVKCGDIETA 299
Query: 491 YNM----------------------------------IRQMNIKPTASLWSAILGACSIY 516
+++ ++ I P + IL C+
Sbjct: 300 HDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCT 359
Query: 517 GNTSLGE----LAARNLFDMEPEKSVNYV--VLSNIYTAAGAWDNARKTRKLMEERSL 568
G LGE L+ +N F+ S YV VL ++Y+ D ARK +++E+R +
Sbjct: 360 GQIELGEQIHSLSIKNGFE-----SDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDV 412
>gi|359478617|ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 628
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 190/530 (35%), Positives = 298/530 (56%), Gaps = 6/530 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H+ II G++SN+++ + ++ Y K G V SA++ FD MP RNVV+W ++ISGY G
Sbjct: 101 LHSTIIKVGFDSNVYICSALVDMYGKCGAVSSAQRLFDEMPHRNVVTWNSLISGYLHVGC 160
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
E A+ +F M++ G+ F+ S+ L C RM + G + G K F N+ V +
Sbjct: 161 PEIAIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDTKLGIQVHGLSMKCGFCYNIVVGTC 220
Query: 172 LLDLYAKCGW-IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
L+DLY+K GW I+ + ++F+ + +++++W +M+ G A + L R M R G++
Sbjct: 221 LIDLYSK-GWNIDASRLMFDLMPERNIITWTSMVAGYAHCQQPVAAMVLVRDMQRLGIRL 279
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAK--YGSIRSAYQ 288
+ T +L + +L Q+H II+ GLES++ L +L+ VY++ S+ +
Sbjct: 280 NYVTYNCLLSSFSSSNDLDHCKQVHCRIIREGLESNSYLEVTLVTVYSECSSSSLEDFNK 339
Query: 289 LYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
+ + + D IS A+I G + N + A F M + +D +L ++
Sbjct: 340 VCSGVTRWDQISWNAVIGGLSNLGN-GEAALKCFSKMRQAGIDMDLFTFTSVLRAIGMIS 398
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA 408
+L+ G+QIHA K + V N L+ MYA+ G I DA R F M +VISW SL++
Sbjct: 399 TLDEGKQIHALVLKAGYGSNLNVQNGLVSMYARCGSINDAKRVFSLMDRHDVISWNSLLS 458
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRI- 467
G A HGYG EA+EL+++M+ G+ P++ TFL +L AC H GL +G E F M N Y +
Sbjct: 459 GCAYHGYGREAVELFEQMRRSGVKPDNTTFLVVLSACRHVGLLDKGLEYFDLMRNDYSLE 518
Query: 468 LPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAAR 527
P EH+S +VDLF+R G L A + I M I+P S++ A+L AC ++GN + A+
Sbjct: 519 SPTTEHYSSMVDLFSRAGYLSEAEDFINTMPIEPGPSVYKALLSACQVHGNVEIAVRCAK 578
Query: 528 NLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
L M P V YV+LSN+ G WDN RK+M +R +RK PGYS++
Sbjct: 579 KLLQMCPNDPVIYVLLSNVQATVGYWDNVASIRKVMCDRGVRKEPGYSWI 628
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 119/454 (26%), Positives = 227/454 (50%), Gaps = 22/454 (4%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITN 59
+++ G + A++ L +DP+ + ++L C + + +H +
Sbjct: 150 SLISGYLHVGCPEIAIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDTKLGIQVHGLSMKC 209
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G+ N+ + T +I Y+K ++ ++R FD MPERN+++WT+M++GYA A+++
Sbjct: 210 GFCYNIVVGTCLIDLYSKGWNIDASRLMFDLMPERNIITWTSMVAGYAHCQQPVAAMVLV 269
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
M R G+R N TY+ L + + L + + I + N +++ L+ +Y++C
Sbjct: 270 RDMQRLGIRLNYVTYNCLLSSFSSSNDLDHCKQVHCRIIREGLESNSYLEVTLVTVYSEC 329
Query: 180 --GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGS 237
+ED + + R D +SWNA+IGGL+ G + + F M + G+ D FT S
Sbjct: 330 SSSSLEDFNKVCSGVTRWDQISWNAVIGGLSNLGNGEAALKCFSKMRQAGIDMDLFTFTS 389
Query: 238 ILRASVGGIELM-KISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT 296
+LRA +G I + + QIH L++K G S+ + L+ +YA+ GSI A +++ M +
Sbjct: 390 VLRA-IGMISTLDEGKQIHALVLKAGYGSNLNVQNGLVSMYARCGSINDAKRVFSLMDRH 448
Query: 297 DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG--- 353
D+IS +L+SG A + +EA +LF+ M + D+ ++L+ C +V L+ G
Sbjct: 449 DVISWNSLLSGCAY-HGYGREAVELFEQMRRSGVKPDNTTFLVVLSACRHVGLLDKGLEY 507
Query: 354 ----RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIA 408
R ++ Y ++++D+++++G +++A + M + + +L++
Sbjct: 508 FDLMRNDYSLESPTTEHY-----SSMVDLFSRAGYLSEAEDFINTMPIEPGPSVYKALLS 562
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
HG A+ KK+ M PND LL
Sbjct: 563 ACQVHGNVEIAVRCAKKLLQ--MCPNDPVIYVLL 594
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 204/412 (49%), Gaps = 9/412 (2%)
Query: 138 LRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDV 197
+ +CA+ + G + +I K F N+++ SAL+D+Y KCG + A LF+ + ++V
Sbjct: 86 VSSCAKSGSVFVGIQLHSTIIKVGFDSNVYICSALVDMYGKCGAVSSAQRLFDEMPHRNV 145
Query: 198 VSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS-QIHD 256
V+WN++I G G + + LF M++ G+ P F++ ++L +E K+ Q+H
Sbjct: 146 VTWNSLISGYLHVGCPEIAIELFLEMVKVGIDPTPFSVSAVL-VGCWRMEDTKLGIQVHG 204
Query: 257 LIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSK 316
L +K G + + LID+Y+K +I ++ ++ M + +II+ T++++G+A
Sbjct: 205 LSMKCGFCYNIVVGTCLIDLYSKGWNIDASRLMFDLMPERNIITWTSMVAGYAH-CQQPV 263
Query: 317 EAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALI 376
A L +DM + ++ V +L+ ++ L+ +Q+H + ++ + L+
Sbjct: 264 AAMVLVRDMQRLGIRLNYVTYNCLLSSFSSSNDLDHCKQVHCRIIREGLESNSYLEVTLV 323
Query: 377 DMYAK--SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
+Y++ S + D N+ + + ISW ++I G + G G A++ + KM+ G+ +
Sbjct: 324 TVYSECSSSSLEDFNKVCSGVTRWDQISWNAVIGGLSNLGNGEAALKCFSKMRQAGIDMD 383
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI 494
TF S+L A EG ++ ++ K + +V ++AR G + A +
Sbjct: 384 LFTFTSVLRAIGMISTLDEGKQIHA-LVLKAGYGSNLNVQNGLVSMYARCGSINDAKRVF 442
Query: 495 RQMNIKPTASLWSAILGACSI--YGNTSLGELAARNLFDMEPEKSVNYVVLS 544
M+ S W+++L C+ YG ++ ++P+ + VVLS
Sbjct: 443 SLMDRHDVIS-WNSLLSGCAYHGYGREAVELFEQMRRSGVKPDNTTFLVVLS 493
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 118/226 (52%), Gaps = 5/226 (2%)
Query: 219 LFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYA 278
L + + G P L ++ + + Q+H IIK+G +S+ + +L+D+Y
Sbjct: 66 LLAQLQQHGSAPTAHILNRMVSSCAKSGSVFVGIQLHSTIIKVGFDSNVYICSALVDMYG 125
Query: 279 KYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILC 338
K G++ SA +L+ M ++++ +LISG+ + A +LF +M+ K+GID
Sbjct: 126 KCGAVSSAQRLFDEMPHRNVVTWNSLISGYLH-VGCPEIAIELFLEMV--KVGIDPTPFS 182
Query: 339 L--MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG 396
+ +L C + LG Q+H + K Y+ VG LID+Y+K I + FD M
Sbjct: 183 VSAVLVGCWRMEDTKLGIQVHGLSMKCGFCYNIVVGTCLIDLYSKGWNIDASRLMFDLMP 242
Query: 397 DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
++N+I+WTS++AGYA A+ L + M+ G+ N VT+ LL
Sbjct: 243 ERNIITWTSMVAGYAHCQQPVAAMVLVRDMQRLGIRLNYVTYNCLL 288
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 107/213 (50%), Gaps = 19/213 (8%)
Query: 297 DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDV--ILCLMLNICANVASLNLGR 354
D SC + I A D + + + DL L++ G IL M++ CA S+ +G
Sbjct: 43 DFFSCNSHI---ACDTDEKQSSVDLKLLAQLQQHGSAPTAHILNRMVSSCAKSGSVFVGI 99
Query: 355 QIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG 414
Q+H+ K + + +AL+DMY K G ++ A R FDEM +NV++W SLI+GY G
Sbjct: 100 QLHSTIIKVGFDSNVYICSALVDMYGKCGAVSSAQRLFDEMPHRNVVTWNSLISGYLHVG 159
Query: 415 YGHEAIELYKKMKHEGMVPNDVTFLSLLFAC-----SHTGLTCEGWELFTDMINKYRILP 469
AIEL+ +M G+ P + ++L C + G+ G + Y I+
Sbjct: 160 CPEIAIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDTKLGIQVHGLSMKCGFC--YNIVV 217
Query: 470 RAEHFSCVVDLFARRGQLESA---YNMIRQMNI 499
+C++DL+++ ++++ ++++ + NI
Sbjct: 218 G----TCLIDLYSKGWNIDASRLMFDLMPERNI 246
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 192/551 (34%), Positives = 301/551 (54%), Gaps = 5/551 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
+ STY + + +R +IH I +G +S L L + ++ Y K V ARK F
Sbjct: 118 NSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVF 177
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAML-RSGVRANQFTYSSALRACARMRWL 147
DRMPE++ + W MISGY +N ++ VF ++ S R + T L A A ++ L
Sbjct: 178 DRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQEL 237
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G I K + +V + + LY+KCG I+ A LF R D+V++NAMI G
Sbjct: 238 RLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGY 297
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
G + S LF+ +M G K TL S++ V G LM I IH +K S
Sbjct: 298 TSNGETELSLSLFKELMLSGAKLKSSTLVSLV--PVSG-HLMLIYAIHGYSLKSNFLSHT 354
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
++ +L VY+K I SA +L+ + + S A+ISG+ ++ +++A LF++M
Sbjct: 355 SVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQN-GLTEDAISLFREMQN 413
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ + V + +L+ CA + +L+LG+ +H V ALI MYAK G IA+
Sbjct: 414 SEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAE 473
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A R FD M KN ++W ++I+GY HG+G EA+ ++ +M + G+ P VTFL +L+ACSH
Sbjct: 474 ARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSH 533
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
GL EG E+F MI++Y P +H++CVVD+ R G L+ A I M I+P S+W
Sbjct: 534 AGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWE 593
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
+LGAC I+ +T+L + LF+++P+ +V+LSNI++A + A R+ ++R
Sbjct: 594 TLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRK 653
Query: 568 LRKNPGYSFLQ 578
L K PGY+ ++
Sbjct: 654 LAKAPGYTLIE 664
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 127/481 (26%), Positives = 237/481 (49%), Gaps = 12/481 (2%)
Query: 43 KKAERQAHL--IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWT 100
K++ +HL HA I+ +G+ +++ L TK+ + +G + AR F + +V +
Sbjct: 28 KRSTSISHLAQTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFN 87
Query: 101 AMISGYAQNGYDENALLVFSAMLRS-GVRANQFTYSSALRACARMRWLQGGRMIQGSIQK 159
++ G++ N ++L VF+ + +S ++ N TY+ A+ A + R + G +I G
Sbjct: 88 VLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIV 147
Query: 160 GRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWL 219
L + S ++ +Y K +EDA +F+R+ KD + WN MI G +S +
Sbjct: 148 DGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQV 207
Query: 220 FRSMMRQG-MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYA 278
FR ++ + + D TL IL A EL QIH L K G S + + I +Y+
Sbjct: 208 FRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYS 267
Query: 279 KYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILC 338
K G I+ A L+R + DI++ A+I G+ + ++ + LFK+++L + L
Sbjct: 268 KCGKIKMASTLFREFRRPDIVAYNAMIHGYT-SNGETELSLSLFKELMLSGAKLKSSTLV 326
Query: 339 LMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK 398
++ + + L L IH ++ K +V AL +Y+K EI A + FDE +K
Sbjct: 327 SLVPVSGH---LMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEK 383
Query: 399 NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG-LTCEGWEL 457
++ SW ++I+GY ++G +AI L+++M++ PN VT +L AC+ G L+ W
Sbjct: 384 SLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKW-- 441
Query: 458 FTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
D++ + ++ ++A+ G + A + M K + W+ ++ ++G
Sbjct: 442 VHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVT-WNTMISGYGLHG 500
Query: 518 N 518
+
Sbjct: 501 H 501
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 185/400 (46%), Gaps = 20/400 (5%)
Query: 22 SCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDV 81
SC T LD +T + +L + + R IH+ G S+ ++ T I Y+K G +
Sbjct: 215 SC--TRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKI 272
Query: 82 LSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC 141
A F ++V++ AMI GY NG E +L +F ++ SG + T S +
Sbjct: 273 KMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVS 332
Query: 142 ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN 201
+ + I G K F+ + V +AL +Y+K IE A LF+ K + SWN
Sbjct: 333 GHLMLIYA---IHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWN 389
Query: 202 AMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLII 259
AMI G G +D+ LFR M P+ T+ IL A +G + L K +HDL+
Sbjct: 390 AMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGK--WVHDLVR 447
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
ESS ++ +LI +YAK GSI A +L+ M K + ++ +ISG+ H +EA
Sbjct: 448 STDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGL-HGHGQEAL 506
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQ-----IHAFAFKYQSSYDAAVGNA 374
+F +M+ + V +L C++ + G + IH + F+ + A V
Sbjct: 507 TIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACV--- 563
Query: 375 LIDMYAKSGEIADANRAFDEMGDKNVIS-WTSLIAGYAKH 413
+D+ ++G + A + + M + S W +L+ H
Sbjct: 564 -VDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIH 602
>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
Length = 838
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 189/530 (35%), Positives = 304/530 (57%), Gaps = 3/530 (0%)
Query: 51 LIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
+IH + + ++ + + +I Y K G + A K F P+ +VV WT++ISGY Q+G
Sbjct: 263 VIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSG 322
Query: 111 YDENALLVFSAMLRS-GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK 169
E AL FS M+ S V + T S ACA++ + GR + G +++ L +
Sbjct: 323 SPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLA 382
Query: 170 SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
++LL LY K G I++A LF + KD++SW+ M+ A G D LF M+ + +K
Sbjct: 383 NSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIK 442
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
P+ T+ S+LRA L + +IH+L + G E ++ +L+D+Y K S A L
Sbjct: 443 PNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDL 502
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ M K D+I+ L SG+A D+ E+ +F++M+ D + L +L + +
Sbjct: 503 FNRMPKKDVIAWAVLFSGYA-DNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGI 561
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
L +HAF K + +G +LI++YAK I DAN+ F M K+V++W+S+IA
Sbjct: 562 LQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAA 621
Query: 410 YAKHGYGHEAIELYKKM-KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
Y HG G EA++L+ +M H PN+VTF+S+L ACSH+GL EG +F M+NKY++
Sbjct: 622 YGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLK 681
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARN 528
P +EH++ +VDL R G+L+ A ++I M ++ +W A+LGAC I+ N +GE+AA+N
Sbjct: 682 PNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKN 741
Query: 529 LFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
LF ++P + Y++LSNIY+ W +A K R+L++E+ L K G S ++
Sbjct: 742 LFSLDPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVE 791
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 148/508 (29%), Positives = 252/508 (49%), Gaps = 21/508 (4%)
Query: 34 MSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPE 93
+ LL+ C K + Q +H+ + G + + TK+ + YA+ + A K F P
Sbjct: 143 VKLLETCCSKLSISQ---LHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPH 199
Query: 94 RNVVSWTAMISGYAQNGYDENALLVFSAM-----LRSGVRANQFTYSSALRACARMRWLQ 148
R V W A++ Y G L +F M + R + ++ S AL++CA +R L
Sbjct: 200 RTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLL 259
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G++I G ++K R ++FV SAL+DLY KCG + DA +F + DVV W ++I G
Sbjct: 260 LGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYE 319
Query: 209 MQGFNDDSFWLF-RSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
G + + F R ++ + + PD TL S+ A +H + + GL++
Sbjct: 320 QSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKL 379
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
L SL+ +Y K GSI++A L+R M DIIS + +++ +A D+ + DLF +M+
Sbjct: 380 CLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYA-DNGAETDVLDLFNEMLD 438
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
K++ + V + +L CA +++L G +IH A Y + V AL+DMY K
Sbjct: 439 KRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEK 498
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A F+ M K+VI+W L +GYA +G HE++ +++ M G P+ + + +L S
Sbjct: 499 AVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISE 558
Query: 448 TGLTCEGWELFTDMI-NKYRILPRAEHF--SCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
G+ + L +I N + F + +++++A+ +E A + + M K +
Sbjct: 559 LGILQQAVCLHAFVIKNGF----ENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVT 614
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDM 532
WS+I+ A YG GE A + + M
Sbjct: 615 -WSSIIAA---YGFHGQGEEALKLFYQM 638
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 186/372 (50%), Gaps = 9/372 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
DP T +S+ C + +H + G ++ L L+ ++ Y K G + +A F
Sbjct: 343 DPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLF 402
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
M +++++SW+ M++ YA NG + + L +F+ ML ++ N T S LRACA + L+
Sbjct: 403 REMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLE 462
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G I F V +AL+D+Y KC E A LF R+ +KDV++W + G A
Sbjct: 463 EGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYA 522
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSN 267
G +S W+FR+M+ G +PD L IL S GI L + +H +IK G E++
Sbjct: 523 DNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGI-LQQAVCLHAFVIKNGFENNQ 581
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI- 326
+ SLI+VYAK SI A ++++ M D+++ +++I+ + +EA LF M
Sbjct: 582 FIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGF-HGQGEEALKLFYQMAN 640
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF---KYQSSYDAAVGNALIDMYAKSG 383
++V +L+ C++ + G I+ F KY+ ++ ++D+ + G
Sbjct: 641 HSDTKPNNVTFISILSACSHSGLIKEG--INMFDIMVNKYKLKPNSEHYAIMVDLLGRMG 698
Query: 384 EIADANRAFDEM 395
E+ A + M
Sbjct: 699 ELDMALDVINNM 710
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 189/548 (34%), Positives = 310/548 (56%), Gaps = 7/548 (1%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
S+L+ C + IH ++ G + ++ + +++ Y + V AR FD+M ER
Sbjct: 99 SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 158
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
+VVSW+ MI ++N + AL + M VR ++ S + A ++ G+ +
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 218
Query: 155 GSIQKGRFVENLFVKS--ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF 212
+ + E++ V + ALLD+YAKCG + A LF + +K VVSW AMI G
Sbjct: 219 AYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNR 278
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRAS--VGGIELMKISQIHDLIIKLGLESSNKLT 270
++ LF M + + P+ T+ S++ G ++L K Q+H I++ G S L
Sbjct: 279 LEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGK--QLHAYILRNGFSVSLALA 336
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
+L+D+Y K IR+A L+ S D++ TA++S +A+ N +AF+LF M +
Sbjct: 337 TALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQA-NCIDQAFNLFDQMRTSGV 395
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
V + +L++CA +L+LG+ +H++ K + D + AL+DMYAK G+I A R
Sbjct: 396 RPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGR 455
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
F E +++ W ++I G+A HGYG EA++++ +M+ +G+ PND+TF+ LL ACSH GL
Sbjct: 456 LFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGL 515
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
EG +LF M++ + ++P+ EH+ C+VDL R G L+ A+ MI+ M IKP +W A++
Sbjct: 516 VTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALV 575
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
AC ++ N LGELAA L ++EPE V++SNIY AA W +A RK M+ ++K
Sbjct: 576 AACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKK 635
Query: 571 NPGYSFLQ 578
PG+S ++
Sbjct: 636 EPGHSVIE 643
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 197/585 (33%), Positives = 317/585 (54%), Gaps = 8/585 (1%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITN 59
I+ K G+ +L+ +T + P Y+ S+L C + IHA+++
Sbjct: 108 TIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRR 167
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G E ++ + +I FY K V + RK FD+M +N++SWT MISGY QN +D A+ +F
Sbjct: 168 GTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLF 227
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
M R G + + F +S L +C + L+ GR + K N FVK+ L+D+YAK
Sbjct: 228 GEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKS 287
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
+ DA +F+ + ++V+S+NAMI G + Q ++ LF M + P T S+L
Sbjct: 288 NLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLL 347
Query: 240 --RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
AS+ +EL K QIH LIIK G+ +LIDVY+K ++ A ++ M + D
Sbjct: 348 GVSASLFALELSK--QIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKD 405
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
I+ A+ G+ + ++EA L+ + + ++ ++ +N+ASL G+Q H
Sbjct: 406 IVVWNAMFFGYTQH-LENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFH 464
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
K + V NAL+DMYAK G I +A + F+ ++V+ W S+I+ +A+HG
Sbjct: 465 NQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAE 524
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
EA+ ++++M EG+ PN VTF+++L ACSH G +G F M + I P EH++CV
Sbjct: 525 EALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSMPG-FGIKPGTEHYACV 583
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKS 537
V L R G+L A I +M I+P A +W ++L AC I GN LG+ AA +P+ S
Sbjct: 584 VSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDS 643
Query: 538 VNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+Y++LSNI+ + G W + +K R M+ + K PG S+++ + K
Sbjct: 644 GSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNK 688
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 152/522 (29%), Positives = 266/522 (50%), Gaps = 36/522 (6%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
S+++ C + +H ++ +G++ ++++ T +I FY+K GB+ AR FD++ E+
Sbjct: 42 SVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGBIEVARLVFDQLLEK 101
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
V+WT +I+GY + G +L +F+ M + V +++ SS L AC+ + +L+GG+ I
Sbjct: 102 TAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIH 161
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND 214
+ + ++ V + L+D Y KC ++ LF+++ K+++SW MI G F+
Sbjct: 162 AYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDW 221
Query: 215 DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIE-LMKISQIHDLIIKLGLESSNKLTGSL 273
++ LF M R G KPD F S+L S G +E L + Q+H IK LES+ + L
Sbjct: 222 EAMKLFGEMNRLGWKPDGFACTSVL-TSCGSLEALEQGRQVHAYTIKANLESNEFVKNGL 280
Query: 274 IDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGID 333
ID+YAK + A +++ M + ++IS A+I G++ + S EA +LF +M ++
Sbjct: 281 IDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLS-EALELFHEMRVRLFPPS 339
Query: 334 DVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFD 393
+ +L + A++ +L L +QIH K S D G+ALID+Y+K + DA F+
Sbjct: 340 LLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFE 399
Query: 394 EMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS------- 446
EM +K+++ W ++ GY +H EA++LY ++ PN+ TF +L+ A S
Sbjct: 400 EMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRH 459
Query: 447 ----HTGLTCEGWEL-------FTDMINKYRILPRAEH------------FSCVVDLFAR 483
H L G + DM K + A ++ ++ A+
Sbjct: 460 GQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQ 519
Query: 484 RGQLESAYNMIRQM---NIKPTASLWSAILGACSIYGNTSLG 522
G+ E A M R+M I+P + A+L ACS G G
Sbjct: 520 HGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDG 561
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 213/402 (52%), Gaps = 4/402 (0%)
Query: 110 GYDENALLVFSAMLR-SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFV 168
GY E AL+VF + R SG N+F +S +RAC ++ ++ G + G + + F ++++V
Sbjct: 15 GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYV 74
Query: 169 KSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGM 228
++L+D Y+K G IE A ++F+++ K V+W +I G G + S LF M +
Sbjct: 75 GTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNV 134
Query: 229 KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQ 288
PD + + S+L A L QIH +++ G E + LID Y K +++ +
Sbjct: 135 VPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRK 194
Query: 289 LYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
L+ M+ +IIS T +ISG+ + ++ EA LF +M D +L C ++
Sbjct: 195 LFDQMVVKNIISWTTMISGYMQ-NSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLE 253
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA 408
+L GRQ+HA+ K + V N LIDMYAKS + DA + FD M ++NVIS+ ++I
Sbjct: 254 ALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIE 313
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
GY+ EA+EL+ +M+ P+ +TF+SLL S + E + +I K +
Sbjct: 314 GYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLL-GVSASLFALELSKQIHGLIIKXGVS 372
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
S ++D++++ ++ A ++ +MN K +W+A+
Sbjct: 373 LDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIV-VWNAMF 413
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 106/215 (49%), Gaps = 26/215 (12%)
Query: 310 RDDNHSKEAFDLFKDMILKKMG--IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSY 367
D+ +S+EA +F D+ +K G ++ +L ++ C + + G Q+H F +
Sbjct: 12 EDEGYSEEALMVFVDL-QRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQ 70
Query: 368 DAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMK 427
D VG +LID Y+K+G+I A FD++ +K ++WT++IAGY K G ++EL+ +M+
Sbjct: 71 DVYVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMR 130
Query: 428 HEGMVPNDVTFLSLLFACS-----------HTGLTCEGWELFTDMINKYRILPRAEHFSC 476
+VP+ S+L ACS H + G E+ ++N
Sbjct: 131 ETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVN------------V 178
Query: 477 VVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
++D + + ++++ + QM +K S + I G
Sbjct: 179 LIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISG 213
>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic [Vitis vinifera]
gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
Length = 893
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 183/545 (33%), Positives = 319/545 (58%), Gaps = 5/545 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T S+L C + ++A +H+ I G+ + ++S+ +I Y+K+G V + + F M
Sbjct: 351 TITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREM 410
Query: 92 PE-RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+N+ W MIS +AQ+G A+ +F ML+ G+R ++F SS L + + L G
Sbjct: 411 ESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVL---SIIDSLSLG 467
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
R+I I K ++ V S+L +Y+KCG +E+++ +FE++ KD VSW +MI G +
Sbjct: 468 RLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEH 527
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
+ + LFR M+ + ++PD TL + L A L K ++H ++ + +
Sbjct: 528 DHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVG 587
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
G+L+++Y+K G+I A +++ + + D SC++L+SG+A++ + ++A LF ++ + +
Sbjct: 588 GALVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQN-GYIEDALLLFHEIRMADL 646
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
ID + ++ A + SL++G Q+HA K + + +VG++L+ MY+K G I + ++
Sbjct: 647 WIDSFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHK 706
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
F+++ ++ISWT++I YA+HG G EA+++Y M+ EG P+ VTF+ +L ACSH G+
Sbjct: 707 VFEQIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGM 766
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
EG+ M +Y I P H++C+VDL R G+L+ A I M I+P A LW +L
Sbjct: 767 VEEGYSHLNSMAKEYGIEPGYYHYACMVDLLGRSGRLKEAERFINNMPIEPDALLWGILL 826
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
AC ++G+ LG LAA+ + ++EP ++ YV LSNI G W++ K R LME ++K
Sbjct: 827 AACKVHGDIELGRLAAKRVIELEPCEAGAYVTLSNICADMGWWEDVMKIRSLMEGTGVKK 886
Query: 571 NPGYS 575
PG+S
Sbjct: 887 EPGWS 891
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 167/582 (28%), Positives = 300/582 (51%), Gaps = 49/582 (8%)
Query: 28 LDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
DP+ TY S+L C + L+++ + NG+ SN ++ +I +AK+ A
Sbjct: 143 FDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFAKLCSFEDAL 202
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
+ F + NVV W A+ISG +N + AL +F M N FT+SS L ACA +
Sbjct: 203 RVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACAALE 262
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
L+ GR +QG + K E++FV +A++DLYAKC ++ A F R+ ++VVSW +I
Sbjct: 263 ELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIIS 322
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
G + + +F F+ M + G K + +T+ S+L A + + + Q+H I K G
Sbjct: 323 GFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYL 382
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTA-LISGFARDDNHSKEAFDLFKD 324
+ ++ +LI++Y+K G + + +++R M T ++ A +IS FA+ + + A +LF+
Sbjct: 383 DSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGR-AVELFQR 441
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M+ + + D +L+I + SL+LGR IH + K D +VG++L MY+K G
Sbjct: 442 MLQEGLRPDKFCSSSVLSI---IDSLSLGRLIHCYILKIGLFTDISVGSSLFTMYSKCGS 498
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ ++ F++M DK+ +SW S+I G+++H + +A++L+++M E + P+ +T + L A
Sbjct: 499 LEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTA 558
Query: 445 CS-----HTGLTCEGWEL-------------FTDMINK----------YRILPRAEHFSC 476
CS G G+ L +M +K + +LP+ + FSC
Sbjct: 559 CSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFDMLPQKDQFSC 618
Query: 477 --VVDLFARRGQLESAYNMIRQMNIKPTASLW------SAILGACSIYGNTSLGEL--AA 526
+V +A+ G +E A + ++ + A LW S+++GA +I + +G A
Sbjct: 619 SSLVSGYAQNGYIEDALLLFHEIRM---ADLWIDSFTVSSVIGAVAILNSLDIGTQLHAC 675
Query: 527 RNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+ E SV +++ +Y+ G+ D K + +E+ L
Sbjct: 676 VTKMGLNAEVSVGSSLVT-MYSKCGSIDECHKVFEQIEKPDL 716
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 145/469 (30%), Positives = 232/469 (49%), Gaps = 11/469 (2%)
Query: 47 RQAHLIHAHII-TNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISG 105
R ++HAH + T +SN ++ ++ +Y K ++ A + FD+ P NV+SW +ISG
Sbjct: 62 RNTKILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILISG 121
Query: 106 YAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVEN 165
QN E++ F M SG NQFTY S L AC + G ++ K F N
Sbjct: 122 CNQNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSN 181
Query: 166 LFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR 225
+V++ ++DL+AK EDA +F+ + ++VV WNA+I G N + LF M
Sbjct: 182 GYVRAGMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCC 241
Query: 226 QGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRS 285
+ P+ FT SIL A EL + +IK G + ++ID+YAK +
Sbjct: 242 RFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQ 301
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG--IDDVILCLMLNI 343
A + + M +++S T +ISGF + D+ S AF FK+M +K+G I++ + +L
Sbjct: 302 AVKEFLRMPIRNVVSWTTIISGFVQKDD-SISAFHFFKEM--RKVGEKINNYTITSVLTA 358
Query: 344 CANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEM-GDKNVIS 402
C + Q+H++ FK D+ V +ALI+MY+K G + + R F EM KN+
Sbjct: 359 CTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAM 418
Query: 403 WTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI 462
W +I+ +A+ G A+EL+++M EG+ P+ S+L L L I
Sbjct: 419 WAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSIIDSLSLG----RLIHCYI 474
Query: 463 NKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
K + S + ++++ G LE +Y + QM K S S I G
Sbjct: 475 LKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITG 523
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 138/266 (51%), Gaps = 1/266 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T + L C + + +H + + + + ++ Y+K G ++ AR+ F
Sbjct: 548 DQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVF 607
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D +P+++ S ++++SGYAQNGY E+ALL+F + + + + FT SS + A A + L
Sbjct: 608 DMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLD 667
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G + + K + V S+L+ +Y+KCG I++ +FE+IE+ D++SW AMI A
Sbjct: 668 IGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIEKPDLISWTAMIVSYA 727
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSN 267
G ++ ++ M ++G KPD T +L A S G+ S ++ + + G+E
Sbjct: 728 QHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGMVEEGYSHLNSMAKEYGIEPGY 787
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSM 293
++D+ + G ++ A + +M
Sbjct: 788 YHYACMVDLLGRSGRLKEAERFINNM 813
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 171/449 (38%), Positives = 279/449 (62%), Gaps = 7/449 (1%)
Query: 134 YSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE 193
Y S L C ++ G+ + + K + +++++ L+ LY KC + DA + + +
Sbjct: 13 YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 72
Query: 194 RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA--SVGGIELMKI 251
++VVSW AMI G + +G+ ++ LF M+ G P+ FT ++L + S G +L +
Sbjct: 73 ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGR- 131
Query: 252 SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD 311
QIH L+IK ES + SL+D+YAK G I A +++ + + D++SCTA+ISG+A+
Sbjct: 132 -QIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQL 190
Query: 312 DNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAV 371
+EA DLF+ + + M + V +L + +A+L+ GRQ+H+ + + + +
Sbjct: 191 -GLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVL 249
Query: 372 GNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGM 431
N+LIDMY+K G + + R FD M ++ VISW +++ GY+KHG G EA+EL+K MK E
Sbjct: 250 QNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENK 309
Query: 432 V-PNDVTFLSLLFACSHTGLTCEGWELFTDMIN-KYRILPRAEHFSCVVDLFARRGQLES 489
V P+ VTFL++L CSH G+ G E+F +M+N K P EH+ CVVDLF R G++E
Sbjct: 310 VKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEE 369
Query: 490 AYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTA 549
A+ I++M +PTA++W ++LGAC ++ N +GE AR L ++E E + NYV+LSN+Y +
Sbjct: 370 AFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYAS 429
Query: 550 AGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
AG WD+ R R+LM+E+++ K PG S+++
Sbjct: 430 AGRWDDVRTVRELMKEKAVIKEPGRSWIE 458
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 132/389 (33%), Positives = 215/389 (55%), Gaps = 5/389 (1%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y S+L CI + A R+ +HAH+I YE ++L T++I+ Y K + AR+ D MP
Sbjct: 13 YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 72
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
ERNVVSWTAMISGY+Q GY AL +F ML SG N+FT+++ L +C Q GR
Sbjct: 73 ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQ 132
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF 212
I + K F ++FV S+LLD+YAK G I +A +F+ + +DVVS A+I G A G
Sbjct: 133 IHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGL 192
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS 272
++++ LFR + R+GM+ + T S+L A G L Q+H +++ L L S
Sbjct: 193 DEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNS 252
Query: 273 LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK-KMG 331
LID+Y+K GS+ + +++ SM + +IS A++ G+++ +EA +LFK M + K+
Sbjct: 253 LIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSK-HGLGREAVELFKLMKEENKVK 311
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN--ALIDMYAKSGEIADAN 389
D V +L+ C++ + G +I + ++ + + ++D++ ++G + +A
Sbjct: 312 PDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAF 371
Query: 390 RAFDEMG-DKNVISWTSLIAGYAKHGYGH 417
+M + W SL+ H H
Sbjct: 372 EFIKKMPFEPTAAIWGSLLGACRVHQNVH 400
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 152/265 (57%), Gaps = 3/265 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ ++L C + IH+ +I +ES++ + + ++ YAK G + AR+ FD +
Sbjct: 113 TFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGL 172
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
PER+VVS TA+ISGYAQ G DE AL +F + R G+R+N TY+S L A + + L GR
Sbjct: 173 PERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGR 232
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ + + + + ++++L+D+Y+KCG + + +F+ + + V+SWNAM+ G + G
Sbjct: 233 QVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHG 292
Query: 212 FNDDSFWLFRSMMRQG-MKPDCFTLGSILRA-SVGGIELMKISQIHDLI-IKLGLESSNK 268
++ LF+ M + +KPD T ++L S GG+E + ++++ K G E +
Sbjct: 293 LGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIE 352
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSM 293
G ++D++ + G + A++ + M
Sbjct: 353 HYGCVVDLFGRAGRVEEAFEFIKKM 377
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 159/296 (53%), Gaps = 11/296 (3%)
Query: 226 QGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRS 285
QG++ + S+L + + + ++H +IK E L LI +Y K +
Sbjct: 4 QGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGD 63
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
A ++ M + +++S TA+ISG+++ ++ EA LF +M++ ++ +L C
Sbjct: 64 ARRVLDEMPERNVVSWTAMISGYSQ-RGYASEALHLFVEMLMSGTAPNEFTFATVLTSCT 122
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
+ + LGRQIH+ K VG++L+DMYAK+G+I +A R FD + +++V+S T+
Sbjct: 123 SSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTA 182
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK- 464
+I+GYA+ G EA++L+++++ EGM N VT+ S+L A S G ++ + ++
Sbjct: 183 IISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAK 242
Query: 465 ---YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
Y +L + ++D++++ G L + + M + S W+A+L S +G
Sbjct: 243 LPFYVVLQNS-----LIDMYSKCGSLTYSRRIFDSMPERTVIS-WNAMLVGYSKHG 292
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 174/465 (37%), Positives = 286/465 (61%), Gaps = 10/465 (2%)
Query: 121 AMLRSGVRANQFT---YSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYA 177
A+L G++ + Y S L C ++ G+ + + K + +++++ L+ LY
Sbjct: 464 ALLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYN 523
Query: 178 KCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGS 237
KC + DA + + + ++VVSW AMI G + +G+ ++ LF M+ G P+ FT +
Sbjct: 524 KCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFAT 583
Query: 238 ILRA--SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLK 295
+L + S G +L + QIH L+IK ES + SL+D+YAK G I A +++ + +
Sbjct: 584 VLTSCTSSSGFQLGR--QIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPE 641
Query: 296 TDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQ 355
D++SCTA+ISG+A+ +EA DLF+ + + M + V +L + +A+L+ GRQ
Sbjct: 642 RDVVSCTAIISGYAQL-GLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQ 700
Query: 356 IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGY 415
+H+ + + + + N+LIDMY+K G + + R FD M ++ VISW +++ GY+KHG
Sbjct: 701 VHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGL 760
Query: 416 GHEAIELYKKMKHEGMV-PNDVTFLSLLFACSHTGLTCEGWELFTDMIN-KYRILPRAEH 473
G EA+EL+K MK E V P+ VTFL++L CSH G+ G E+F +M+N K P EH
Sbjct: 761 GREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEH 820
Query: 474 FSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDME 533
+ CVVDLF R G++E A+ I++M +PTA++W ++LGAC ++ N +GE AR L ++E
Sbjct: 821 YGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIE 880
Query: 534 PEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
E + NYV+LSN+Y +AG WD+ R R+LM+E+++ K PG S+++
Sbjct: 881 SENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIE 925
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 137/410 (33%), Positives = 224/410 (54%), Gaps = 6/410 (1%)
Query: 12 QLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKV 71
QLK+AL + ++ Y S+L CI + A R+ +HAH+I YE ++L T++
Sbjct: 460 QLKEAL-LEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRL 518
Query: 72 IIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQ 131
I+ Y K + AR+ D MPERNVVSWTAMISGY+Q GY AL +F ML SG N+
Sbjct: 519 IVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNE 578
Query: 132 FTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER 191
FT+++ L +C Q GR I + K F ++FV S+LLD+YAK G I +A +F+
Sbjct: 579 FTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDG 638
Query: 192 IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI 251
+ +DVVS A+I G A G ++++ LFR + R+GM+ + T S+L A G L
Sbjct: 639 LPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHG 698
Query: 252 SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD 311
Q+H +++ L L SLID+Y+K GS+ + +++ SM + +IS A++ G+++
Sbjct: 699 RQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSK- 757
Query: 312 DNHSKEAFDLFKDMILK-KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA 370
+EA +LFK M + K+ D V +L+ C++ + G +I + ++
Sbjct: 758 HGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPE 817
Query: 371 VGN--ALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHGYGH 417
+ + ++D++ ++G + +A +M + W SL+ H H
Sbjct: 818 IEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVH 867
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 182/579 (31%), Positives = 321/579 (55%), Gaps = 5/579 (0%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPSTYMSL--LQFCIDKKAERQAHLIHAHIITN 59
+++ + G QAL +L ++Y ++ LQ C + +HA ++ +
Sbjct: 236 SMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKS 295
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G E N+ + +++ Y K G V SA + F + E++ +SW +M+S Y QNG A+
Sbjct: 296 GSEVNIQCNA-LLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFI 354
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
S MLR G + + S A + WL G+ + K R + V + L+D+Y KC
Sbjct: 355 SEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKC 414
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
+IE + +F+R+ KD +SW +I A + ++ +FR ++G+K D +GSIL
Sbjct: 415 RYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSIL 474
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
A G ++ Q+H I+ GL + +ID+Y + G + + +++ ++ + DI+
Sbjct: 475 EACSGLETILLAKQLHCYAIRNGLLDL-VVKNRIIDIYGECGEVYHSLKMFETVEQKDIV 533
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
+ T++I+ +A + EA LF +M + D V L +L ++SL G+++H F
Sbjct: 534 TWTSMINCYA-NSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGF 592
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
+ + A+ ++L+DMY+ G ++ A + F+ + K+++ WT++I HG+G +A
Sbjct: 593 LIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQA 652
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD 479
I+L+K+M G+ P+ V+FL+LL+ACSH+ L EG M++ YR+ P EH++CVVD
Sbjct: 653 IDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVD 712
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVN 539
L R GQ E AY I+ M +KP + +W ++LGAC ++ N L +AA L ++EP+ N
Sbjct: 713 LLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGN 772
Query: 540 YVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
YV++SN++ G W+NA++ R + ER LRK+P S+++
Sbjct: 773 YVLVSNVFAEMGKWNNAKEVRARISERGLRKDPACSWIE 811
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 162/571 (28%), Positives = 273/571 (47%), Gaps = 34/571 (5%)
Query: 9 KTGQLKQALKFSLS-CPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGY--ESNL 65
K G L+QAL+ S P Y +L KKA Q +HAH + G +
Sbjct: 36 KEGNLRQALRLLTSQTPGRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDG 95
Query: 66 HLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAM--- 122
L+TK++ Y K G V AR FD M R V SW A+I Y +G AL V+ AM
Sbjct: 96 FLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLS 155
Query: 123 LRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWI 182
SGV + T +S L+A + G + G K + FV +AL+ +YAKCG +
Sbjct: 156 AASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGIL 215
Query: 183 EDAWILFERI-ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
+ A +FE + + +DV SWN+MI G G + LFR M R + + +T +L+
Sbjct: 216 DSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQV 275
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC 301
+L ++H ++K G E N +L+ +Y K G + SA +++R + + D IS
Sbjct: 276 CTELAQLNLGRELHAALLKSGSE-VNIQCNALLVMYTKCGRVDSALRVFREIDEKDYISW 334
Query: 302 TALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF 361
+++S + ++ ++ EA + +M+ D + + + ++ L G+++HA+A
Sbjct: 335 NSMLSCYVQNGLYA-EAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAI 393
Query: 362 KYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIE 421
K + D VGN L+DMY K I + FD M K+ ISWT++I YA+ EA+E
Sbjct: 394 KQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALE 453
Query: 422 LYKKMKHEGMVPNDVTFLSLLFACS--HTGLTCEGWELFT------DMINKYRILPRAEH 473
++++ + EG+ + + S+L ACS T L + + D++ K RI
Sbjct: 454 IFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGLLDLVVKNRI------ 507
Query: 474 FSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG--NTSLGELAARNLFD 531
+D++ G++ + M + K + W++++ + G N +L A D
Sbjct: 508 ----IDIYGECGEVYHSLKMFETVEQKDIVT-WTSMINCYANSGLLNEALVLFAEMQSTD 562
Query: 532 MEPEKSVNYVVLSNIYTAAGAWDNARKTRKL 562
++P+ V L +I A G + K +++
Sbjct: 563 VQPDS----VALVSILGAIGGLSSLAKGKEV 589
>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
Length = 1026
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 202/554 (36%), Positives = 314/554 (56%), Gaps = 9/554 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY S+L C K H +H+ II N + SNL + ++ YAK G + AR+ F
Sbjct: 427 DDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQF 486
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ + R+ VSW +I GY Q + A +F M G+ ++ + +S L ACA +R L+
Sbjct: 487 ELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLE 546
Query: 149 GGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ + S++ G+ + L+ S+L+D+YAKCG I+ A + + + VVS NA+I G
Sbjct: 547 QGKQVHCLSVKTGQETK-LYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGY 605
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A + + LFR M+ +G+ T S+L A +L QIH LI+K+GL+ +
Sbjct: 606 AQINL-EQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDD 664
Query: 268 KLTG-SLIDVYAKYGSIRSAYQLYR--SMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ G SL+ +Y A L+ S K+ ++ TA+ISG +++D S A L+K+
Sbjct: 665 EFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVV-WTAMISGLSQNDC-SVVALQLYKE 722
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M + D L CA V+S+ G + H+ F D +AL+DMYAK G+
Sbjct: 723 MRSCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGD 782
Query: 385 IADANRAFDEMG-DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
+ + + F EM K+VISW S+I G+AK+GY +A+ ++ +MK + P+DVTFL +L
Sbjct: 783 VKSSMQVFKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLT 842
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
ACSH+G EG +F M+N Y + PRA+H +C+VDL R G L+ A I ++N +P A
Sbjct: 843 ACSHSGRVSEGRLIFDMMVNLYGMQPRADHCACMVDLLGRWGSLKEAEEFINKLNFEPDA 902
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
+W+ +LGAC I+G+ G+ AA L ++EP+ S YV+LSNIY A+G WD R+ M
Sbjct: 903 KVWATMLGACRIHGDDIRGQQAAEKLIELEPQNSSPYVLLSNIYAASGNWDEVNTLRREM 962
Query: 564 EERSLRKNPGYSFL 577
E+ ++K PG S++
Sbjct: 963 REKGVKKLPGCSWI 976
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 178/529 (33%), Positives = 283/529 (53%), Gaps = 53/529 (10%)
Query: 51 LIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
L+HA + G SN+++ + ++ YAK G + +A+K FD + E+NVV W AM+ GY QNG
Sbjct: 348 LVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNG 407
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
Y + +F M G + FTYSS L ACA +++L G + I K +F NLFV +
Sbjct: 408 YANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGN 467
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
AL+D+YAK G +EDA FE I +D VSWN +I G + ++F LFR M G+ P
Sbjct: 468 ALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILP 527
Query: 231 DCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQ 288
D +L SIL ASV G+E K Q+H L +K G E+ SLID+YAK G+I SA++
Sbjct: 528 DEVSLASILSACASVRGLEQGK--QVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHK 585
Query: 289 LYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
+ M + ++S ALI+G+A+ + ++A +LF+DM+++ + ++ +L+ C
Sbjct: 586 ILACMPERSVVSMNALIAGYAQIN--LEQAVNLFRDMLVEGINSTEITFASLLDACHEQQ 643
Query: 349 SLNLGRQIHAFAFKYQSSYDAA-VGNALIDMYAKSGEIADANRAFDEMGD-KNVISWTSL 406
LNLGRQIH+ K D +G +L+ MY S DA+ F E + K+ + WT++
Sbjct: 644 KLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAM 703
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS----------------HTGL 450
I+G +++ A++LYK+M+ ++P+ TF+S L AC+ HTG
Sbjct: 704 ISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFHTGF 763
Query: 451 TCE-------------------GWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA- 490
+ ++F +M K ++ ++ ++ FA+ G E A
Sbjct: 764 DSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVIS----WNSMIVGFAKNGYAEDAL 819
Query: 491 --YNMIRQMNIKPTASLWSAILGACSIYGNTSLGEL---AARNLFDMEP 534
++ ++Q ++ P + +L ACS G S G L NL+ M+P
Sbjct: 820 RVFDEMKQSHVTPDDVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGMQP 868
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 143/418 (34%), Positives = 227/418 (54%), Gaps = 2/418 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD ++ S++ I +A + + G E + VI Y +G + +A
Sbjct: 224 LDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYVDLGRLDNASDL 283
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F RMP RNVV+W MISG+A+ GY A+ F M ++G+++ + T S L A A + L
Sbjct: 284 FSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAAL 343
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G ++ K N++V S+L+ +YAKCG +E A +F+ + ++VV WNAM+GG
Sbjct: 344 DFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGY 403
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
G+ ++ LF +M G PD FT SIL A L Q+H +IIK S+
Sbjct: 404 VQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNL 463
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ +L+D+YAK G++ A Q + + D +S +I G+ ++++ EAF LF+ M L
Sbjct: 464 FVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEV-EAFHLFRRMNL 522
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ D+V L +L+ CA+V L G+Q+H + K G++LIDMYAK G I
Sbjct: 523 LGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDS 582
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A++ M +++V+S +LIAGYA+ +A+ L++ M EG+ ++TF SLL AC
Sbjct: 583 AHKILACMPERSVVSMNALIAGYAQINL-EQAVNLFRDMLVEGINSTEITFASLLDAC 639
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 156/600 (26%), Positives = 282/600 (47%), Gaps = 94/600 (15%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAH------------------LIHAHIITNGYESNL 65
P L P Y +LQ C+ K + + H +IHA + G+ S
Sbjct: 35 PSHTLKPRIYTHILQNCLQKSKQVKTHSLFDEIPQRLSQFSTTNKIIHAQSLKLGFWSKG 94
Query: 66 HLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
L ++ YAK DV A +AF ++ ++++++W +++S +++ G+ + F + S
Sbjct: 95 VLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGFPHLVVKYFGLLWNS 154
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
GV N+FT++ L +CAR+ ++ GR + ++ K F + + AL+ +YAKC ++ DA
Sbjct: 155 GVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDA 214
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGG 245
+F+ D VSW +MIGG G +++ +F+ M + G +PD +++ A
Sbjct: 215 RSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINA---- 270
Query: 246 IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALI 305
Y G + +A L+ M ++++ +I
Sbjct: 271 -------------------------------YVDLGRLDNASDLFSRMPNRNVVAWNLMI 299
Query: 306 SGFARDDNHSKEAFDLFKDMILKKMGIDDV--ILCLMLNICANVASLNLGRQIHAFAFKY 363
SG A+ + EA + F++M +K GI L +L+ A++A+L+ G +HA A K
Sbjct: 300 SGHAK-GGYGVEAIEFFQNM--RKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQ 356
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELY 423
+ VG++L+ MYAK G++ A + FD + ++NV+ W +++ GY ++GY +E +EL+
Sbjct: 357 GLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELF 416
Query: 424 KKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFAR 483
MK G P+D T+ S+L AC+ G +L + +I K + + +VD++A+
Sbjct: 417 FNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVII-KNKFASNLFVGNALVDMYAK 475
Query: 484 RGQLE-------------------------------SAYNMIRQMN---IKPTASLWSAI 509
G LE A+++ R+MN I P ++I
Sbjct: 476 SGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASI 535
Query: 510 LGAC-SIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
L AC S+ G ++ ++ + K + L ++Y GA D+A K M ERS+
Sbjct: 536 LSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSV 595
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 209/428 (48%), Gaps = 12/428 (2%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L D + S+L C + Q +H + G E+ L+ + +I YAK G + SA K
Sbjct: 526 LPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHK 585
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
MPER+VVS A+I+GYAQ E A+ +F ML G+ + + T++S L AC +
Sbjct: 586 ILACMPERSVVSMNALIAGYAQINL-EQAVNLFRDMLVEGINSTEITFASLLDACHEQQK 644
Query: 147 LQGGRMIQGSIQK-GRFVENLFVKSALLDLYAKCGWIEDAWILFERIER-KDVVSWNAMI 204
L GR I I K G +++ F+ +LL +Y DA +LF K V W AMI
Sbjct: 645 LNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMI 704
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
GL+ + + L++ M + PD T S LRA + ++ H LI G +
Sbjct: 705 SGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFHTGFD 764
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALISGFARDDNHSKEAFDLFK 323
S + +L+D+YAK G ++S+ Q+++ M K D+IS ++I GFA+ + ++++A +F
Sbjct: 765 SDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAK-NGYAEDALRVFD 823
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK-YQSSYDAAVGNALIDMYAKS 382
+M + DDV +L C++ ++ GR I Y A ++D+ +
Sbjct: 824 EMKQSHVTPDDVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGMQPRADHCACMVDLLGRW 883
Query: 383 GEIADANRAFDEMG-DKNVISWTSLIAGYAKHG---YGHEAIELYKKMKHEGMVPNDVTF 438
G + +A +++ + + W +++ HG G +A E +++ + P
Sbjct: 884 GSLKEAEEFINKLNFEPDAKVWATMLGACRIHGDDIRGQQAAEKLIELEPQNSSP--YVL 941
Query: 439 LSLLFACS 446
LS ++A S
Sbjct: 942 LSNIYAAS 949
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 24/203 (11%)
Query: 22 SCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDV 81
SC + L D +T++S L+ C + + H+ I G++S+ S+ ++ YAK GDV
Sbjct: 725 SC-NVLPDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDV 783
Query: 82 LSARKAFDRMP-ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRA 140
S+ + F M +++V+SW +MI G+A+NGY E+AL VF M +S V + T+ L A
Sbjct: 784 KSSMQVFKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLTA 843
Query: 141 CARMRWLQGGRMIQGSIQKGRFVENLFVK-----------SALLDLYAKCGWIEDAWILF 189
C+ G + +GR + ++ V + ++DL + G +++A
Sbjct: 844 CSH----------SGRVSEGRLIFDMMVNLYGMQPRADHCACMVDLLGRWGSLKEAEEFI 893
Query: 190 ERIE-RKDVVSWNAMIGGLAMQG 211
++ D W M+G + G
Sbjct: 894 NKLNFEPDAKVWATMLGACRIHG 916
>gi|15223562|ref|NP_176050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173051|sp|Q9FXA9.1|PPR83_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g56570
gi|9954755|gb|AAG09106.1|AC009323_17 Hypothetical protein [Arabidopsis thaliana]
gi|332195289|gb|AEE33410.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 611
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 186/516 (36%), Positives = 295/516 (57%), Gaps = 9/516 (1%)
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
L+T +I+ Y + G V AR FD MP+R+VV+WTAMI+GYA + Y+ A F M++ G
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG-WIEDA 185
N+FT SS L++C M+ L G ++ G + K +L+V +A++++YA C +E A
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAA 166
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG--MKPDCFTLGSILRASV 243
++F I+ K+ V+W +I G G +++ M+ + + P C T+ AS+
Sbjct: 167 CLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASI 226
Query: 244 GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTA 303
+ K QIH +IK G +S+ + S++D+Y + G + A + M D+I+
Sbjct: 227 DSVTTGK--QIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNT 284
Query: 304 LISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY 363
LIS R D S EA +F+ + + ++ CAN+A+LN G+Q+H F+
Sbjct: 285 LISELERSD--SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRR 342
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK-NVISWTSLIAGYAKHGYGHEAIEL 422
+ + + NALIDMYAK G I D+ R F E+ D+ N++SWTS++ GY HGYG EA+EL
Sbjct: 343 GFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVEL 402
Query: 423 YKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFA 482
+ KM G+ P+ + F+++L AC H GL +G + F M ++Y I P + ++CVVDL
Sbjct: 403 FDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLG 462
Query: 483 RRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSL-GELAARNLFDMEPEKSVNYV 541
R G++ AY ++ +M KP S W AILGAC + + L LAAR + +++P+ YV
Sbjct: 463 RAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYV 522
Query: 542 VLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
+LS IY A G W + + RK+M +K G S++
Sbjct: 523 MLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWI 558
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 195/388 (50%), Gaps = 6/388 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR-KAFDR 90
T S+L+ C + K L+H ++ G E +L++ ++ YA + A F
Sbjct: 113 TLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRD 172
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+ +N V+WT +I+G+ G L ++ ML + + A+RA A + + G
Sbjct: 173 IKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTG 232
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ I S+ K F NL V +++LDLY +CG++ +A F +E KD+++WN +I L +
Sbjct: 233 KQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELE-R 291
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
+ ++ +F+ QG P+C+T S++ A L Q+H I + G + +L
Sbjct: 292 SDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELA 351
Query: 271 GSLIDVYAKYGSIRSAYQLYRSML-KTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+LID+YAK G+I + +++ ++ + +++S T+++ G+ + EA +LF M+
Sbjct: 352 NALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYG-SHGYGAEAVELFDKMVSSG 410
Query: 330 MGIDDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ D ++ +L+ C + + G + + +Y + D + N ++D+ ++G+I +A
Sbjct: 411 IRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEA 470
Query: 389 NRAFDEMGDK-NVISWTSLIAGYAKHGY 415
+ M K + +W +++ H +
Sbjct: 471 YELVERMPFKPDESTWGAILGACKAHKH 498
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 204/646 (31%), Positives = 349/646 (54%), Gaps = 73/646 (11%)
Query: 3 IVRANFKTGQLKQALKFSLSC----PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIIT 58
++R + K G+L A+ ++SC T LD T +L+ C + + R H I
Sbjct: 88 LIREHIKQGRLDSAI--NVSCRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICC 145
Query: 59 NGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER---NVVSWTAMISGYAQNGYDENA 115
NG+ESN+ + ++ Y++ G + A FD + +R +V+SW +++S + ++ A
Sbjct: 146 NGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTA 205
Query: 116 LLVFSAML------RSGVRANQFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFV 168
L +FS M + R++ + + L AC ++ + + + G +I+ G F++ +FV
Sbjct: 206 LDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLD-VFV 264
Query: 169 KSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ-- 226
+AL+D YAKCG +E+A +F +E KDVVSWNAM+ G + G +F LF++M ++
Sbjct: 265 GNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENI 324
Query: 227 ---------------------------------GMKPDCFTLGSILRASVGGIELMKISQ 253
G P+C T+ S+L A + +
Sbjct: 325 PLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGME 384
Query: 254 IHDLIIK---------LGLESSNKLT-GSLIDVYAKYGSIRSAYQLYR--SMLKTDIISC 301
IH +K G E + + +LID+Y+K S ++A ++ + + ++++
Sbjct: 385 IHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTW 444
Query: 302 TALISGFARDDNHSKEAFDLFKDMILKKMGIDD---VILCLMLNICANVASLNLGRQIHA 358
T +I G A+ + S +A LF +MI + G+ I C+++ CA++A++ +G+QIHA
Sbjct: 445 TVMIGGHAQYGD-SNDALKLFVEMISEPYGVAPNAYTISCILM-ACAHLAAIRIGKQIHA 502
Query: 359 FAFKYQSSYDAA---VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGY 415
+ ++ YD++ V N LI+MY+K G++ A FD M K+ ISWTS++ GY HG
Sbjct: 503 YVLRHHQ-YDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGR 561
Query: 416 GHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFS 475
G EA++++ KM+ G VP+D+TFL +L+ACSH G+ +G F M Y + PRAEH++
Sbjct: 562 GSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYA 621
Query: 476 CVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPE 535
+DL AR G+L+ A+ ++ M ++PTA +W A+L AC ++ N L E A L +M E
Sbjct: 622 YAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAE 681
Query: 536 KSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSK 581
+Y ++SNIY AG W + + R LM++ ++K PG S++Q K
Sbjct: 682 NDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQK 727
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 131/524 (25%), Positives = 251/524 (47%), Gaps = 65/524 (12%)
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
L T V+ Y G A +R+ V W +I + + G ++A+ V MLR+G
Sbjct: 53 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 112
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
R + FT L+AC + + G G I F N+F+ +AL+ +Y++CG +E+A
Sbjct: 113 TRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 172
Query: 187 ILFERIERK---DVVSWNAMIGGLAMQGFNDDSFWLFRSMM------RQGMKPDCFTLGS 237
++F+ I ++ DV+SWN+++ + LF M + D ++ +
Sbjct: 173 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 232
Query: 238 ILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
IL A + + ++H I+ G + +LID YAK G + +A +++ M D
Sbjct: 233 ILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 292
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGID------------------------ 333
++S A+++G+++ N K AF+LFK+M + + +D
Sbjct: 293 VVSWNAMVAGYSQSGNF-KAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVF 351
Query: 334 -----------DVILCLMLNICANVASLNLGRQIHAFAFKY----------QSSYDAAVG 372
V + +L+ CA++ + + G +IHA++ K D V
Sbjct: 352 RQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVY 411
Query: 373 NALIDMYAKSGEIADANRAFDEMG--DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE- 429
NALIDMY+K A FD++ ++NV++WT +I G+A++G ++A++L+ +M E
Sbjct: 412 NALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEP 471
Query: 430 -GMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFS-CVVDLFARRGQL 487
G+ PN T +L AC+H G ++ ++ ++ A + C+++++++ G +
Sbjct: 472 YGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDV 531
Query: 488 ESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
++A ++ M+ K S W++++ ++G S A ++FD
Sbjct: 532 DTARHVFDSMSQKSAIS-WTSMMTGYGMHGRGS----EALDIFD 570
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 155/310 (50%), Gaps = 10/310 (3%)
Query: 162 FVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFR 221
F+ + + ++ Y CG + A ++ ER+ V WN +I QG D + +
Sbjct: 47 FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 106
Query: 222 SMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYG 281
M+R G + D FTL +L+A S H LI G ES+ + +L+ +Y++ G
Sbjct: 107 RMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCG 166
Query: 282 SIRSAYQLYRSMLK---TDIISCTALISGFARDDNHSKEAFDLFKDMIL------KKMGI 332
S+ A ++ + + D+IS +++S + N + A DLF M L
Sbjct: 167 SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSN-AWTALDLFSKMTLIVHEKPTNERS 225
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAF 392
D + + +L C ++ ++ +++H A + + D VGNALID YAK G + +A + F
Sbjct: 226 DIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVF 285
Query: 393 DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTC 452
+ M K+V+SW +++AGY++ G A EL+K M+ E + + VT+ +++ S G +
Sbjct: 286 NMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSH 345
Query: 453 EGWELFTDMI 462
E +F MI
Sbjct: 346 EALNVFRQMI 355
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 197/613 (32%), Positives = 320/613 (52%), Gaps = 64/613 (10%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y SLL+ C + + + QA +H I+ + LS +I Y K+G++ A FD +P
Sbjct: 8 YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67
Query: 93 ERNV-------------------------------VSWTAMISGYAQNGYDENALLVFSA 121
+ N+ VSW ISGYA G +A+ V+
Sbjct: 68 QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKL 127
Query: 122 MLR-SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK-- 178
ML+ + + N+ T+S+ L C++ R + GR I G I K F ++FV S L+D+Y K
Sbjct: 128 MLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLG 187
Query: 179 -----------------------------CGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
CG IE++ LF ++ +D +SW MI GL
Sbjct: 188 LIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQ 247
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
G ++ +FR M G D FT GS+L A + L + QIH +I+ + + +
Sbjct: 248 NGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFV 307
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+L+D+Y+K SI+SA +++ M + ++IS TA++ G+ + + S+EA +F +M
Sbjct: 308 GSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQ-NGFSEEAVKIFFEMQRNG 366
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ DD L +++ CAN+ASL G Q H A V NALI +Y K G +++
Sbjct: 367 VEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSH 426
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
R F EM ++ +SWT+L+AGYA+ G +E I L+++M G+ P+ VTF+ +L ACS G
Sbjct: 427 RLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAG 486
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
L +G + F MI ++ I+P +H +C++DL R G+LE A N I M P W+ +
Sbjct: 487 LVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATL 546
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
L +C ++G+ +G+ AA +L +EP+ +YV+LS++Y + G WD + R+ M ++ +R
Sbjct: 547 LSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVR 606
Query: 570 KNPGYSFLQSSKK 582
K PGYS+++ K
Sbjct: 607 KEPGYSWIKYKGK 619
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 143/281 (50%), Gaps = 2/281 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D T+ S+L C A + IHA++I ++ N+ + + ++ Y+K + SA
Sbjct: 268 MDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETV 327
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F RMP++NV+SWTAM+ GY QNG+ E A+ +F M R+GV + FT S + +CA + L
Sbjct: 328 FKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASL 387
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G + + V +AL+ LY KCG E++ LF + +D VSW A++ G
Sbjct: 388 EEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGY 447
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESS 266
A G +++ LF M+ G+KPD T +L A S G+ + +I + G+
Sbjct: 448 AQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPI 507
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALIS 306
+ID+ + G + A +M D++ L+S
Sbjct: 508 VDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLS 548
>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
Length = 785
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 192/561 (34%), Positives = 308/561 (54%), Gaps = 13/561 (2%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D TY + L C R +HA + +G + + LS + YA G++ AR+
Sbjct: 101 VDRFTYAAALAACSRALDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRV 160
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD E + VSW +++SGY + G E L VFS M G+ N F S ++ CA +
Sbjct: 161 FDAAEEHDDVSWNSLLSGYVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDV 220
Query: 148 QGGRMI----QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
GR I G + K +LF+ SA++D+YAK G + +A LF+ + +V+ +NAM
Sbjct: 221 --GRHIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAM 278
Query: 204 IGGLAM------QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDL 257
I G + + ++ L+ M +GM+P FT SILRA E QIH
Sbjct: 279 IAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQ 338
Query: 258 IIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKE 317
++K + + +LID+Y+ G + Y+ +RS+ K DI++ T++ISG +++ K
Sbjct: 339 VLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEK- 397
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
A LF++ I + D + ++N CA++A G QI A KY + A+GN+ I
Sbjct: 398 ALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIH 457
Query: 378 MYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVT 437
M A+SG++ R F EM ++V+SW+++I+ +A+HG +A+ ++ +M + + PN+VT
Sbjct: 458 MCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVT 517
Query: 438 FLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
FL++L ACSH GL +G + M N+Y + P +H +CVVDL R G+L A IR
Sbjct: 518 FLNVLTACSHGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDS 577
Query: 498 NIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNAR 557
A +W ++L +C I+G+ G+L A + D+EP S +YV+L N+Y AG A
Sbjct: 578 AFHDDAVVWRSLLASCRIHGDMERGQLVADQIMDLEPTSSASYVILYNMYLDAGELSLAS 637
Query: 558 KTRKLMEERSLRKNPGYSFLQ 578
KTR LM+ER ++K PG S+++
Sbjct: 638 KTRDLMKERGVKKEPGLSWIE 658
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 154/558 (27%), Positives = 279/558 (50%), Gaps = 46/558 (8%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAK--VGDVLSARKAFDR 90
Y+ LL+ C A +HAHI ++L L ++ Y + VG L A + D
Sbjct: 5 YLDLLRSCT---ALPHVAAVHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLIDE 61
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS-GVRANQFTYSSALRACARMRWLQG 149
MP RN VS+ +IS Y++ G AL F+ + G+R ++FTY++AL AC+R L+
Sbjct: 62 MPRRNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRT 121
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
G+ + +F+ ++L +YA CG + +A +F+ E D VSWN+++ G
Sbjct: 122 GKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVR 181
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMK--ISQIHDLIIKLGLESSN 267
G +++ +F M G+ + F LGSI++ G ++ + +H ++K GL++
Sbjct: 182 AGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADL 241
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDD-----NHSKEAFDLF 322
L ++ID+YAK G++ +A L++S+ ++I A+I+GF RD+ S+EA L+
Sbjct: 242 FLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLY 301
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
+M + M + +L C G+QIH K+ D +G+ALID+Y+ S
Sbjct: 302 SEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDS 361
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
G + D R F + +++++WTS+I+G ++ +A+ L+++ G+ P+ T S++
Sbjct: 362 GCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVM 421
Query: 443 FAC-----SHTG--LTC----EGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAY 491
AC + TG + C G+ FT M N + + + AR G +++
Sbjct: 422 NACASLAVARTGEQIQCLAIKYGFNRFTAMGNSF------------IHMCARSGDVDAVT 469
Query: 492 NMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD--MEPEKSVNYVVLSNIYTA 549
++M + S WSA++ + + +G A +F+ M + + N V N+ TA
Sbjct: 470 RRFQEMESRDVVS-WSAVISSHAQHGCAR----DALRIFNEMMNAKVAPNEVTFLNVLTA 524
Query: 550 ---AGAWDNARKTRKLME 564
G D+ + ++M+
Sbjct: 525 CSHGGLVDDGLRYYEIMK 542
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 190/579 (32%), Positives = 319/579 (55%), Gaps = 6/579 (1%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNG 60
I+R G +A+ F S + P TY +L+ C A + +H +
Sbjct: 104 ILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKACSSLHALQLGRWVH-ETMHGK 162
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
++N+++ VI +AK G V AR+ F+ MP+R++ SWTA+I G NG ALL+F
Sbjct: 163 TKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWTALICGTMWNGECLEALLLFR 222
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M G+ + +S L AC R+ ++ G +Q + F +L+V +A++D+Y KCG
Sbjct: 223 KMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCG 282
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+A +F + DVVSW+ +I G + +S+ L+ M+ G+ + S+L
Sbjct: 283 DPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLP 342
Query: 241 ASVGGIELMKIS-QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
A +G +EL+K ++H+ ++K GL S + +LI +YA GSI+ A ++ DI+
Sbjct: 343 A-LGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIM 401
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
++I G+ + + AF F+ + + + + + +L IC + +L G++IH +
Sbjct: 402 VWNSMIVGYNLVGDF-ESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGY 460
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
K + +VGN+LIDMY+K G + + F +M +NV ++ ++I+ HG G +
Sbjct: 461 VTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKG 520
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD 479
+ Y++MK EG PN VTF+SLL ACSH GL GW L+ MIN Y I P EH+SC+VD
Sbjct: 521 LAFYEQMKEEGNRPNKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVD 580
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVN 539
L R G L+ AY I +M + P A+++ ++LGAC ++ L EL A + ++ + S +
Sbjct: 581 LIGRAGDLDGAYKFITRMPMTPDANVFGSLLGACRLHNKVELTELLAERILQLKADDSGH 640
Query: 540 YVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
YV+LSN+Y + W++ K R +++++ L K PG S++Q
Sbjct: 641 YVLLSNLYASGKRWEDMSKVRSMIKDKGLEKKPGSSWIQ 679
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 129/482 (26%), Positives = 255/482 (52%), Gaps = 11/482 (2%)
Query: 47 RQAHLIHAHIITNGY-----ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTA 101
+A +HA ++ G+ + +++++ Y G + A F +P + +++W A
Sbjct: 44 HEARTLHALLLVLGFFQPTCPHSSSFASQLVNVYVNFGSLQHAFLTFRALPHKPIIAWNA 103
Query: 102 MISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGR 161
++ G G+ A+ + +ML+ GV + +TY L+AC+ + LQ GR + ++ G+
Sbjct: 104 ILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKACSSLHALQLGRWVHETMH-GK 162
Query: 162 FVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFR 221
N++V+ A++D++AKCG +EDA +FE + +D+ SW A+I G G ++ LFR
Sbjct: 163 TKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWTALICGTMWNGECLEALLLFR 222
Query: 222 SMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKLTGSLIDVYAKY 280
M +G+ PD + SIL A G +E +K+ + ++ G ES ++ ++ID+Y K
Sbjct: 223 KMRSEGLMPDSVIVASILPA-CGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKC 281
Query: 281 GSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLM 340
G A++++ M+ +D++S + LI+G++++ + +E++ L+ MI + + ++ +
Sbjct: 282 GDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLY-QESYKLYIGMINVGLATNAIVATSV 340
Query: 341 LNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNV 400
L + L G+++H F K D VG+ALI MYA G I +A F+ DK++
Sbjct: 341 LPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDI 400
Query: 401 ISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTD 460
+ W S+I GY G A ++++ PN +T +S+L C+ G +G E+
Sbjct: 401 MVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIH-G 459
Query: 461 MINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTS 520
+ K + + ++D++++ G LE + +QM ++ + ++ ++ AC +G
Sbjct: 460 YVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMVR-NVTTYNTMISACGSHGQGE 518
Query: 521 LG 522
G
Sbjct: 519 KG 520
>gi|15221304|ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74600, chloroplastic; Flags: Precursor
gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical protein; 84160-81473 [Arabidopsis thaliana]
gi|332197493|gb|AEE35614.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 895
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 182/547 (33%), Positives = 308/547 (56%), Gaps = 9/547 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF--- 88
T S++ C +A +HA + +G+ + ++ +I Y+K GD+ + + F
Sbjct: 353 TVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDL 412
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D + +N+V+ MI+ ++Q+ A+ +F+ ML+ G+R ++F+ S L + L
Sbjct: 413 DDIQRQNIVN--VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLN 467
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ + G K V +L V S+L LY+KCG +E+++ LF+ I KD W +MI G
Sbjct: 468 LGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFN 527
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G+ ++ LF M+ G PD TL ++L L + +IH ++ G++
Sbjct: 528 EYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMD 587
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
L +L+++Y+K GS++ A Q+Y + + D +SC++LISG+++ ++ F LF+DM++
Sbjct: 588 LGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQH-GLIQDGFLLFRDMVMS 646
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+D + +L A +LG Q+HA+ K + +VG++L+ MY+K G I D
Sbjct: 647 GFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDC 706
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+AF ++ ++I+WT+LIA YA+HG +EA+++Y MK +G P+ VTF+ +L ACSH
Sbjct: 707 CKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHG 766
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
GL E + M+ Y I P H+ C+VD R G+L A + I M+IKP A +W
Sbjct: 767 GLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGT 826
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L AC I+G LG++AA+ ++EP + Y+ LSNI G WD +TRKLM+ +
Sbjct: 827 LLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGV 886
Query: 569 RKNPGYS 575
+K PG+S
Sbjct: 887 QKEPGWS 893
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 252/492 (51%), Gaps = 12/492 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY S+L C + R ++ A +I G E ++ + T ++ YAK G + A + F
Sbjct: 250 DSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVF 308
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
R+P +VVSWT M+SGY ++ +AL +F M SGV N T +S + AC R +
Sbjct: 309 SRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVC 368
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE---RIERKDVVSWNAMIG 205
+ + K F + V +AL+ +Y+K G I+ + +FE I+R+++V N MI
Sbjct: 369 EASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMIT 426
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
+ + LF M+++G++ D F++ S+L + + L K Q+H +K GL
Sbjct: 427 SFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV-LDCLNLGK--QVHGYTLKSGLVL 483
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ SL +Y+K GS+ +Y+L++ + D ++ISGF + + +EA LF +M
Sbjct: 484 DLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGF-NEYGYLREAIGLFSEM 542
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ D+ L +L +C++ SL G++IH + + +G+AL++MY+K G +
Sbjct: 543 LDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSL 602
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A + +D + + + +S +SLI+GY++HG + L++ M G + S+L A
Sbjct: 603 KLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAA 662
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
+ + + G ++ I K + S ++ ++++ G ++ Q+N P
Sbjct: 663 ALSDESSLGAQVHA-YITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQIN-GPDLIA 720
Query: 506 WSAILGACSIYG 517
W+A++ + + +G
Sbjct: 721 WTALIASYAQHG 732
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 137/527 (25%), Positives = 254/527 (48%), Gaps = 43/527 (8%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
+Y S++ C +A + L+ H I GY + + +I ++K A K F
Sbjct: 152 SYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDS 211
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
NV W +I+G +N +F M + + +TYSS L ACA + L+ G+
Sbjct: 212 LSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGK 271
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
++Q + K E++FV +A++DLYAKCG + +A +F RI VVSW M+ G
Sbjct: 272 VVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSN 330
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
+ +F+ M G++ + T+ S++ A + + SQ+H + K G + +
Sbjct: 331 DAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAA 390
Query: 272 SLIDVYAKYGSIRSAYQLYRSM---LKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+LI +Y+K G I + Q++ + + +I++ +I+ F++ K A LF M+ +
Sbjct: 391 ALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN--VMITSFSQSKKPGK-AIRLFTRMLQE 447
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ D+ +C +L++ + LNLG+Q+H + K D VG++L +Y+K G + ++
Sbjct: 448 GLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEES 504
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC-SH 447
+ F + K+ W S+I+G+ ++GY EAI L+ +M +G P++ T ++L C SH
Sbjct: 505 YKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSH 564
Query: 448 TGLT--------------CEGWELFTDMINKYRI-------------LPRAEHFSC--VV 478
L +G +L + ++N Y LP + SC ++
Sbjct: 565 PSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLI 624
Query: 479 DLFARRGQLESAYNMIRQM---NIKPTASLWSAILGACSIYGNTSLG 522
+++ G ++ + + R M + S+IL A ++ +SLG
Sbjct: 625 SGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLG 671
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 248/477 (51%), Gaps = 24/477 (5%)
Query: 48 QAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYA 107
QAHL+ +++ ++ L+ ++ +Y+ G + A K FD +P+ +VVS MISGY
Sbjct: 71 QAHLLRRYLLP----FDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYK 126
Query: 108 QNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMI-QGSIQKGRFVENL 166
Q+ E +L FS M G AN+ +Y S + AC+ ++ ++ +I+ G F +
Sbjct: 127 QHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEV 186
Query: 167 FVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ 226
V+SAL+D+++K EDA+ +F +V WN +I G F LF M
Sbjct: 187 -VESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVG 245
Query: 227 GMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRS 285
KPD +T S+L A+ +E ++ + + +IK G E T +++D+YAK G +
Sbjct: 246 FQKPDSYTYSSVL-AACASLEKLRFGKVVQARVIKCGAEDVFVCT-AIVDLYAKCGHMAE 303
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
A +++ + ++S T ++SG+ + N + A ++FK+M + I++ + +++ C
Sbjct: 304 AMEVFSRIPNPSVVSWTVMLSGYTK-SNDAFSALEIFKEMRHSGVEINNCTVTSVISACG 362
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD---KNVIS 402
+ + Q+HA+ FK D++V ALI MY+KSG+I + + F+++ D +N+++
Sbjct: 363 RPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN 422
Query: 403 WTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL--FACSHTGLTCEGWELFTD 460
+I +++ +AI L+ +M EG+ ++ + SLL C + G G+ L +
Sbjct: 423 --VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSG 480
Query: 461 MINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
++ + S + L+++ G LE +Y + + + K A W++++ + YG
Sbjct: 481 LVLDLTV------GSSLFTLYSKCGSLEESYKLFQGIPFKDNA-CWASMISGFNEYG 530
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 147/293 (50%), Gaps = 4/293 (1%)
Query: 11 GQLKQALK-FSLSCPD-TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLS 68
G L++A+ FS D T D ST ++L C + + IH + + G + + L
Sbjct: 530 GYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLG 589
Query: 69 TKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR 128
+ ++ Y+K G + AR+ +DR+PE + VS +++ISGY+Q+G ++ L+F M+ SG
Sbjct: 590 SALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFT 649
Query: 129 ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWIL 188
+ F SS L+A A G + I K V S+LL +Y+K G I+D
Sbjct: 650 MDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKA 709
Query: 189 FERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIE 247
F +I D+++W A+I A G +++ ++ M +G KPD T +L A S GG+
Sbjct: 710 FSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLV 769
Query: 248 LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDII 299
++ ++ G+E N+ ++D + G +R A +M +K D +
Sbjct: 770 EESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDAL 822
>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
Length = 693
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 183/555 (32%), Positives = 310/555 (55%), Gaps = 2/555 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY +L+ C IH H++ G ++ + + ++ YAK + A K F
Sbjct: 105 DFYTYPVVLKACGGLGRVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLF 164
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D P+R+V W A+IS Y ++G E AL F M G N T++ + +C R+ L+
Sbjct: 165 DEFPQRDVGCWNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLE 224
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ + + + R + + FV SAL+D+Y KCG +E A +FE+I RK+ ++WNAMI G +
Sbjct: 225 RGKEVHRELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYS 284
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
++G + L M +G KP TL SI+ AS ++L IH I++ ++
Sbjct: 285 LKGDSRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIF 344
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ SLID Y K G + SA ++R++ K +++S +ISG NH +A ++ +M
Sbjct: 345 IDVSLIDFYFKCGYVSSAETIFRTISKNEVVSWNVMISGHVMVGNHI-QALHIYDNMKEH 403
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ D + L+ C+ +A+L+ GR++H ++ + V AL+DMYAK G++ +A
Sbjct: 404 HVKPDALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEA 463
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ F ++ ++++SWTS+I Y HG EA+ L+ +M+ + + VTFL++L ACSH
Sbjct: 464 RKLFHQLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHA 523
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI-RQMNIKPTASLWS 507
GL EG+ F +M+ +Y I P EH+SC++DL R G+L AY ++ R + L S
Sbjct: 524 GLVDEGYMYFNEMVVQYDIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLS 583
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
+ AC ++ N LG + L +++P+ Y++LSN+Y + WD RK R+ M+E
Sbjct: 584 TLFSACLLHNNFVLGIQIGKMLIEVDPDDPSTYILLSNMYASVNKWDEVRKVRRKMKELG 643
Query: 568 LRKNPGYSFLQSSKK 582
L+K+PG S+++ +++
Sbjct: 644 LKKSPGCSWIEINQR 658
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 146/539 (27%), Positives = 260/539 (48%), Gaps = 20/539 (3%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D T +S L+ C K +Q LIH I + G++SN+ LS +I FY D SA
Sbjct: 1 MDYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELV 60
Query: 88 FDRMP-ERNVVSWTAMISGYAQNGYDENALLVFSAM-LRSGVRANQFTYSSALRACARMR 145
F +V W A++S Y N AL +F + S VR + +TY L+AC +
Sbjct: 61 FQTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLG 120
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
+ GR I + K + ++FV S+L+++YAKC DA LF+ ++DV WNA+I
Sbjct: 121 RVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVIS 180
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
G + + F M G +P+ T ++ + + L + ++H +I+ +
Sbjct: 181 CYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILL 240
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ +L+D+Y K G + A +++ + + + I+ A+I+G++ + S+ +L M
Sbjct: 241 DAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGD-SRSCIELL--M 297
Query: 326 ILKKMGIDDVILCLMLNICANVASLNL--GRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
+ G ++ L I A+ S+ L G+ IH + + + D + +LID Y K G
Sbjct: 298 RMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCG 357
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
++ A F + V+SW +I+G+ G +A+ +Y MK + P+ +TF S L
Sbjct: 358 YVSSAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLS 417
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
ACS +G EL +IN +++ ++D++A+ G ++ A + Q+ +
Sbjct: 418 ACSQLAALDKGRELHYCIIN-HKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLV 476
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEK------SVNYVVLSNIYTAAGAWDNA 556
S W++++ A +G S A LFD E +K SV ++ + + + AG D
Sbjct: 477 S-WTSMIFAYGSHGQAS----EALRLFD-EMQKLNVRADSVTFLAVLSACSHAGLVDEG 529
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 190/544 (34%), Positives = 300/544 (55%), Gaps = 1/544 (0%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
++L+ + A IHA G++ N + + +I Y+ G V AR FD + +
Sbjct: 155 TILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWK 214
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
+ V+WTAM+S Y++N E+AL FS M +G + N F +S L+A + G+ I
Sbjct: 215 DAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIH 274
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND 214
G K V ALLD+YAKCG+IEDA +FE I DV+ W+ +I A N+
Sbjct: 275 GCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNE 334
Query: 215 DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLI 274
+F +F MMR + P+ F+L +L+A L QIH+L+IKLG ES + +L+
Sbjct: 335 QAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALM 394
Query: 275 DVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD 334
DVYAK ++ ++ +++RS+ + +S +I G+ + +++A +F++M +
Sbjct: 395 DVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQS-GFAEDALSVFQEMRAAHVLSTQ 453
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE 394
V +L CAN AS+ QIH+ K + D V N+LID YAK G I DA + F+
Sbjct: 454 VTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFES 513
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG 454
+ +V+SW ++I+GYA HG +A+EL+ +M PNDVTF++LL C TGL +G
Sbjct: 514 IIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQG 573
Query: 455 WELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACS 514
LF M +RI P +H++C+V L R G+L A I + P+ +W A+L +C
Sbjct: 574 LSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCV 633
Query: 515 IYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGY 574
++ N +LG+ +A + ++EP+ YV+LSN+Y AAG D RK M ++K G
Sbjct: 634 VHKNVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGL 693
Query: 575 SFLQ 578
S+++
Sbjct: 694 SWVE 697
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 161/536 (30%), Positives = 272/536 (50%), Gaps = 10/536 (1%)
Query: 20 SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH--LSTKVIIFYAK 77
SL+ P LD LLQ CI + R +HA ++ G + L + ++ YAK
Sbjct: 39 SLALPK--LDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAK 96
Query: 78 VGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSA 137
+G + +AR+ FD MPERN+VS+ ++ GYA G E A +F + R G N F ++
Sbjct: 97 LGPLAAARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTI 156
Query: 138 LRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDV 197
L+ M I K N FV S+L+D Y+ CG + A +F+ I KD
Sbjct: 157 LKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDA 216
Query: 198 VSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDL 257
V+W AM+ + +D+ F M G KP+ F L S+L+A+V + IH
Sbjct: 217 VTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGC 276
Query: 258 IIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKE 317
+K ++ + G+L+D+YAK G I A ++ + D+I + LIS +A+ +++
Sbjct: 277 AVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQ-SYQNEQ 335
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
AF++F M+ + ++ L +L CANVA L+LG+QIH K + VGNAL+D
Sbjct: 336 AFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMD 395
Query: 378 MYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVT 437
+YAK + ++ F + D N +SW ++I GY + G+ +A+ ++++M+ ++ VT
Sbjct: 396 VYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVT 455
Query: 438 FLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
F S+L AC++T ++ + +I K + ++D +A+ G + A + +
Sbjct: 456 FSSVLRACANTASIKHTVQIHS-LIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESI 514
Query: 498 NIKPTASLWSAILGACSIYGN-TSLGELAAR-NLFDMEPEKSVNYVVLSNIYTAAG 551
I+ W+AI+ +++G T EL R N D +P V +V L ++ + G
Sbjct: 515 -IQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKP-NDVTFVALLSVCGSTG 568
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 186/392 (47%), Gaps = 30/392 (7%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
+LQ C + IH +I GYES L + ++ YAK ++ ++ + F + + N
Sbjct: 358 VLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDAN 417
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG 155
VSW +I GY Q+G+ E+AL VF M + V + Q T+SS LRACA ++ I
Sbjct: 418 EVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHS 477
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD 215
I+K F + V ++L+D YAKCG I DA +FE I + DVVSWNA+I G A+ G D
Sbjct: 478 LIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATD 537
Query: 216 SFWLFRSMMRQGMKPDCFTLGSILR--ASVG----GIELMKISQIHDLIIKLGLESSNKL 269
+ LF M + KP+ T ++L S G G+ L S D IK ++ +
Sbjct: 538 ALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFN-SMTMDHRIKPSMDHYTCI 596
Query: 270 T------GSLIDVYAKYGSIRS--AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDL 321
G L D G I S + ++R++L + ++ + F+ + E D
Sbjct: 597 VRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFSAEKVLEIEPQDE 656
Query: 322 FKDMILKKM----GIDDVILCL---MLNICAN----VASLNLGRQIHAFAFKYQSSYDAA 370
++L M GI D + L M NI ++ + + ++HAF+ D
Sbjct: 657 TTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGLSWVEIKGEVHAFSVGSADHPDMR 716
Query: 371 VGNALIDMY----AKSGEIADANRAFDEMGDK 398
+ NA+++ ++ G + D N ++ ++
Sbjct: 717 IINAMLEWLNLKASREGYVPDINVVLHDVDEE 748
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 189/537 (35%), Positives = 306/537 (56%), Gaps = 21/537 (3%)
Query: 58 TNGYESNLHLSTKVIIFYAKVGDVL-SARKAFDRMPERNVVSWTAMISGYAQNGYDENAL 116
T +ES++ + +I + K + +A K FD+M E NVV+WT MI+ Q G+ A+
Sbjct: 195 TGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAI 254
Query: 117 LVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLY 176
F M+ SG +++FT SS ACA + L G+ + + V++ V+ +L+D+Y
Sbjct: 255 RFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMY 312
Query: 177 AKC---GWIEDAWILFERIERKDVVSWNAMIGG------LAMQGFNDDSFWLFRSMMRQG 227
AKC G ++D +F+R+E V+SW A+I G LA + N LF M+ QG
Sbjct: 313 AKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAIN-----LFSEMITQG 367
Query: 228 -MKPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRS 285
++P+ FT S +A G + ++ Q+ K GL S++ + S+I ++ K +
Sbjct: 368 HVEPNHFTFSSAFKA-CGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMED 426
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
A + + S+ + +++S + G R+ N ++AF L ++ +++G+ +L+ A
Sbjct: 427 AQRAFESLSEKNLVSYNTFLDGTCRNLNF-EQAFKLLSEITERELGVSAFTFASLLSGVA 485
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
NV S+ G QIH+ K S + V NALI MY+K G I A+R F+ M ++NVISWTS
Sbjct: 486 NVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTS 545
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
+I G+AKHG+ +E + +M EG+ PN+VT++++L ACSH GL EGW F M +
Sbjct: 546 MITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDH 605
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
+I P+ EH++C+VDL R G L A+ I M + +W LGAC ++ NT LG+LA
Sbjct: 606 KIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLA 665
Query: 526 ARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
AR + +++P + Y+ LSNIY AG W+ + + R+ M+ER+L K G S+++ K
Sbjct: 666 ARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDK 722
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 153/574 (26%), Positives = 284/574 (49%), Gaps = 48/574 (8%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D T+ SLL+ CI + R L+HA +I E + L +I Y+K GD A
Sbjct: 60 MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDV 119
Query: 88 FD---RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
F+ R +R+VVSW+AM++ Y NG + +A+ VF L G+ N + Y++ +RAC+
Sbjct: 120 FETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNS 179
Query: 145 RWLQGGRMIQGSIQK-GRFVENLFVKSALLDLYAKC-GWIEDAWILFERIERKDVVSWNA 202
++ GR+ G + K G F ++ V +L+D++ K E+A+ +F+++ +VV+W
Sbjct: 180 DFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTL 239
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
MI GF ++ F M+ G + D FTL S+ A L Q+H I+ G
Sbjct: 240 MITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSG 299
Query: 263 LESSNKLTGSLIDVYAKY---GSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
L + + SL+D+YAK GS+ +++ M ++S TALI+G+ ++ N + EA
Sbjct: 300 L--VDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAI 357
Query: 320 DLFKDMILK-KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDM 378
+LF +MI + + + C N++ +G+Q+ AFK + +++V N++I M
Sbjct: 358 NLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISM 417
Query: 379 YAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTF 438
+ KS + DA RAF+ + +KN++S+ + + G ++ +A +L ++ + + TF
Sbjct: 418 FVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTF 477
Query: 439 LSLLFACSHTGLTCEGWELFTDMI-------------------------NKYRILPRAEH 473
SLL ++ G +G ++ + ++ R+ E+
Sbjct: 478 ASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMEN 537
Query: 474 -----FSCVVDLFARRG---QLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
++ ++ FA+ G ++ +N + + +KP + AIL ACS G S G
Sbjct: 538 RNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRH 597
Query: 526 ARNLFD---MEPEKSVNYVVLSNIYTAAGAWDNA 556
++++ ++P K +Y + ++ AG +A
Sbjct: 598 FNSMYEDHKIKP-KMEHYACMVDLLCRAGLLTDA 630
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 221/465 (47%), Gaps = 56/465 (12%)
Query: 65 LHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLR 124
++++ ++I+ + GD+ A A D M A++G + FS++L+
Sbjct: 26 INVADRLILRHLNAGDLRGAVSALDLM---------------ARDGIRPMDSVTFSSLLK 70
Query: 125 SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG---W 181
S +RA F R+ L R+I+ I+ + N +L+ LY+K G
Sbjct: 71 SCIRARDF----------RLGKLVHARLIEFDIEPDSVLYN-----SLISLYSKSGDSAK 115
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
ED + R ++DVVSW+AM+ G D+ +F + G+ P+ + +++RA
Sbjct: 116 AEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRA 175
Query: 242 SVGGIELMKISQIH-DLIIKLGLESSNKLTG-SLIDVYAK-YGSIRSAYQLYRSMLKTDI 298
+ + + ++ ++K G S+ G SLID++ K S +AY+++ M + ++
Sbjct: 176 CSNS-DFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNV 234
Query: 299 ISCTALIS-----GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG 353
++ T +I+ GF R EA F DM+L D L + + CA + +L+LG
Sbjct: 235 VTWTLMITRCMQMGFPR------EAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288
Query: 354 RQIHAFAFKYQSSYDAAVGNALIDMYAK---SGEIADANRAFDEMGDKNVISWTSLIAGY 410
+Q+H++A + S V +L+DMYAK G + D + FD M D +V+SWT+LI GY
Sbjct: 289 KQLHSWAIR--SGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGY 346
Query: 411 AKH-GYGHEAIELYKKMKHEGMV-PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
K+ EAI L+ +M +G V PN TF S AC + G ++ K +
Sbjct: 347 MKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAF-KRGLA 405
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGAC 513
+ + V+ +F + ++E A ++ K S + + G C
Sbjct: 406 SNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTC 450
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 92/177 (51%), Gaps = 2/177 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ SLL + + R+ IH+ ++ G N + +I Y+K G + +A + F+ M
Sbjct: 476 TFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFM 535
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL-QGG 150
RNV+SWT+MI+G+A++G+ L F+ M+ GV+ N+ TY + L AC+ + + +G
Sbjct: 536 ENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGW 595
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGG 206
R + + + + ++DL + G + DA+ + + DV+ W +G
Sbjct: 596 RHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGA 652
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 187/533 (35%), Positives = 302/533 (56%), Gaps = 5/533 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H I G ++++ + ++ Y K G + +AR+ F M +++ V++ AM+ G ++ G
Sbjct: 157 LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGL 216
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
AL +F+AM R+G+ A FT+SS L A M L G + + + V N+FV ++
Sbjct: 217 HTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNS 276
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
LLD Y+KC ++D LF+ + +D VS+N +I A LFR M + G
Sbjct: 277 LLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQ 336
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
++L + ++ QIH ++ LGL S + L +LID+Y+K G + +A +
Sbjct: 337 VLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFS 396
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
+ + IS TALI+G+ ++ H +EA LF DM + D ++ +++A +
Sbjct: 397 NRSEKSAISWTALITGYVQNGQH-EEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIG 455
Query: 352 LGRQIHAFAFKYQSSYDAAV--GNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
LGRQ+H++ + S Y ++V G+ L+DMYAK G + +A R FDEM ++N ISW ++I+
Sbjct: 456 LGRQLHSYLIR--SGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISA 513
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
YA +G AI++++ M H G P+ VTFLS+L ACSH GL E + F M ++Y I P
Sbjct: 514 YAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISP 573
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
EH++CV+D R G M+ +M K +W++IL +C I+GN L +AA L
Sbjct: 574 WKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKL 633
Query: 530 FDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
F MEP + YV+LSNIY AG W++A +K+M +R +RK GYS+++ +K
Sbjct: 634 FGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQK 686
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 141/465 (30%), Positives = 241/465 (51%), Gaps = 25/465 (5%)
Query: 59 NGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLV 118
N + NL LS Y+ GD+ +A+ F P RN +WT M+ +A G +AL +
Sbjct: 73 NIFSLNLILSA-----YSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSL 127
Query: 119 FSAMLRSGVRANQFTYSSALRACARMRWLQGGRM--IQGSIQKGRFVENLFVKSALLDLY 176
F AML GV ++ T ++ L L G + + K ++FV + LLD Y
Sbjct: 128 FRAMLGEGVIPDRVTVTTVLN-------LPGCTVPSLHPFAIKFGLDTHVFVCNTLLDAY 180
Query: 177 AKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLG 236
K G + A +F + KD V++NAM+ G + +G + + LF +M R G+ FT
Sbjct: 181 CKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFS 240
Query: 237 SILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT 296
SIL + G L+ Q+H L+++ + + SL+D Y+K + +L+ M +
Sbjct: 241 SILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPER 300
Query: 297 DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVIL--CLMLNICANVASLNLGR 354
D +S +I+ +A + + LF++M +K+G D +L ML++ ++ +++G+
Sbjct: 301 DNVSYNVIIAAYAWNQC-AATVLRLFREM--QKLGFDRQVLPYATMLSVAGSLPDVHIGK 357
Query: 355 QIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG 414
QIHA + + +GNALIDMY+K G + A F +K+ ISWT+LI GY ++G
Sbjct: 358 QIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNG 417
Query: 415 YGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF 474
EA++L+ M+ G+ P+ TF S++ A S + G +L + +I R ++ F
Sbjct: 418 QHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLI---RSGYKSSVF 474
Query: 475 --SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
S +VD++A+ G L+ A +M + + S W+A++ A + YG
Sbjct: 475 SGSVLVDMYAKCGCLDEALRTFDEMPERNSIS-WNAVISAYAHYG 518
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 180/390 (46%), Gaps = 5/390 (1%)
Query: 50 HLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQN 109
H +HA ++ + N+ ++ ++ FY+K + R+ FD MPER+ VS+ +I+ YA N
Sbjct: 256 HQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWN 315
Query: 110 GYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK 169
L +F M + G Y++ L + + G+ I + +
Sbjct: 316 QCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLG 375
Query: 170 SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
+AL+D+Y+KCG ++ A F K +SW A+I G G ++++ LF M R G++
Sbjct: 376 NALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLR 435
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
PD T SI++AS + Q+H +I+ G +SS L+D+YAK G + A +
Sbjct: 436 PDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRT 495
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA-NVA 348
+ M + + IS A+IS +A +K A +F+ M+ D V +L C+ N
Sbjct: 496 FDEMPERNSISWNAVISAYAH-YGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGL 554
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK-NVISWTSLI 407
+ + H +Y S +ID + G + + EM K + I WTS++
Sbjct: 555 ADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSIL 614
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVT 437
H G++ + K GM P D T
Sbjct: 615 HSCRIH--GNQELARVAADKLFGMEPTDAT 642
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 198/438 (45%), Gaps = 40/438 (9%)
Query: 164 ENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM 223
+N+F + +L Y+ G + A LF ++ +W M+ A G D+ LFR+M
Sbjct: 72 KNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAM 131
Query: 224 MRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
+ +G+ PD T+ ++L + + +H IK GL++ + +L+D Y K+G +
Sbjct: 132 LGEGVIPDRVTVTTVL-----NLPGCTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLL 186
Query: 284 RSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNI 343
+A +++ M D ++ A++ G +++ H+ +A LF M + +L +
Sbjct: 187 AAARRVFLEMHDKDAVTYNAMMMGCSKEGLHT-QALQLFAAMRRAGIPATHFTFSSILTV 245
Query: 344 CANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISW 403
A +A L LG Q+HA + S + V N+L+D Y+K + D R FDEM +++ +S+
Sbjct: 246 AAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSY 305
Query: 404 TSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS-----------HTGLTC 452
+IA YA + + L+++M+ G + + ++L H L
Sbjct: 306 NVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVL 365
Query: 453 EGW-------ELFTDMINKYRILPRAE------------HFSCVVDLFARRGQLESAYNM 493
G DM +K +L A+ ++ ++ + + GQ E A +
Sbjct: 366 LGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQL 425
Query: 494 ---IRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSV-NYVVLSNIYTA 549
+R+ ++P + +S+I+ A S LG L + SV + VL ++Y
Sbjct: 426 FSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAK 485
Query: 550 AGAWDNARKTRKLMEERS 567
G D A +T M ER+
Sbjct: 486 CGCLDEALRTFDEMPERN 503
>gi|225460143|ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Vitis vinifera]
Length = 748
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 200/608 (32%), Positives = 330/608 (54%), Gaps = 44/608 (7%)
Query: 8 FKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHL 67
FKT L + L S + D ++ P + SLL C D K+ + +H HII+ G+E + L
Sbjct: 81 FKTVSLIR-LHASSASQDLIVHPIS--SLLSSCTDVKSLAEGRQLHGHIISLGFEQHPIL 137
Query: 68 STKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV 127
K++ FY+ ++ A + + W +IS Y +NG+ + AL + M++ G+
Sbjct: 138 VPKLVTFYSAFNLLVDAHVITENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGI 197
Query: 128 RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWI 187
R + FTY S L+AC L G+ + SI R +L V +AL+ +Y KCG + A
Sbjct: 198 RPDNFTYPSVLKACGEELDLGFGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARD 257
Query: 188 LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM-------------------MRQGM 228
LF++I +D VSWN+MI A G +++F LF SM +R G
Sbjct: 258 LFDKIPERDAVSWNSMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGN 317
Query: 229 KPDCFTLGSILR------------------ASVGGIELMKISQIHDLIIKLGLESSNKLT 270
L S +R + +G +L K +IH I+ + +
Sbjct: 318 YKGALELLSQMRKCGSHLDSVALIIGLGACSHIGDAKLGK--EIHSFAIRSCFGEVDTVK 375
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
+LI +Y++ ++ AY L++ M +I+ ++ISG D S+EA L ++M+L +
Sbjct: 376 NALITMYSRCKDLKHAYLLFQLMEAKSLITWNSIISGCCHMDR-SEEASFLLREMLLFGI 434
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAV-GNALIDMYAKSGEIADAN 389
+ V + +L +CA VA+L G++ H + + + D + NAL+DMYA+SG++ +A
Sbjct: 435 EPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEAR 494
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
R FD +G+++ +++TS+IAGY G G A++L+++M + + P+ +T +++L ACSH+G
Sbjct: 495 RVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSG 554
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
L +G LF M + Y + P EHF+C+ DLF R G L A +IR M KPT ++W+ +
Sbjct: 555 LVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATL 614
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
+GAC I+ NT +GE AA L +M+PE YV+++N+Y AAG W+ K R M + +R
Sbjct: 615 IGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANMYAAAGCWNKLAKVRIFMRDLGVR 674
Query: 570 KNPGYSFL 577
K PG +++
Sbjct: 675 KAPGCAWV 682
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 192/584 (32%), Positives = 324/584 (55%), Gaps = 12/584 (2%)
Query: 3 IVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHII-TN 59
IV A + G ++AL + + D + ++ + C K +Q L+HA I+ T
Sbjct: 29 IVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETR 88
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
E ++ L T +I YA+ D+ ARK FD M ++ +V+W A+I+GY++NG AL ++
Sbjct: 89 LLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIY 148
Query: 120 SAMLR---SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLY 176
M+ G++ + T+SSAL AC + + GR I+ + + V++AL+++Y
Sbjct: 149 QDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMY 208
Query: 177 AKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLG 236
+KCG +E A +F+R++ +DV++WN MI G A QG + LF+ M KP+ T
Sbjct: 209 SKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFI 268
Query: 237 SILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAK-YGSIRSAYQLYRSMLK 295
+L A +L + IH + + G ES + L+++Y K S+ A Q++ M
Sbjct: 269 GLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRT 328
Query: 296 TDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQ 355
D+I+ LI + + +K+A D+FK M L+ + +++ L +L+ CA + + G+
Sbjct: 329 RDVITWNILIVAYVQY-GQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKA 387
Query: 356 IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGY 415
+HA + D + N+L++MY + G + D F + DK+++SW++LIA YA+HG+
Sbjct: 388 VHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGH 447
Query: 416 GHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFS 475
+E + ++ EG+ +DVT +S L ACSH G+ EG + F M+ + + P HF
Sbjct: 448 SRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFL 507
Query: 476 CVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPE 535
C+VDL +R G+LE+A N+I M P A W+++L C ++ +T A LF++E E
Sbjct: 508 CMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESE 567
Query: 536 KSVNYV-VLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+ V +LSN+Y AG WD+ RKTR R+ RKNPG S+++
Sbjct: 568 DEHSTVTLLSNVYAEAGRWDDVRKTRN---RRAARKNPGCSYIE 608
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 239/454 (52%), Gaps = 8/454 (1%)
Query: 74 FYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFT 133
Y K G V A F + N VSWT +++ +A+NG+ AL + M+ G+R +
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 134 YSSALRACARMRWLQGGRMIQGSIQKGRFVE-NLFVKSALLDLYAKCGWIEDAWILFERI 192
+ A+ C+ + L+ G+++ I + R +E ++ + +AL+ +YA+C +E A F+ +
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 193 ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR---QGMKPDCFTLGSILRASVGGIELM 249
+K +V+WNA+I G + G + + +++ M+ +GMKPD T S L A ++
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180
Query: 250 KISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFA 309
+ +I + G S + + +LI++Y+K GS+ SA +++ + D+I+ +ISG+A
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 310 RDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDA 369
+ + +A +LF+ M + V +L C N+ L GR IH + D
Sbjct: 241 K-QGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDL 299
Query: 370 AVGNALIDMYAK-SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKH 428
+GN L++MY K S + +A + F+ M ++VI+W LI Y ++G +A++++K+M+
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQL 359
Query: 429 EGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLE 488
E + PN++T ++L AC+ G +G + +I R + +++++ R G L+
Sbjct: 360 ENVAPNEITLSNVLSACAVLGAKRQGKAVHA-LIASGRCKADVVLENSLMNMYNRCGSLD 418
Query: 489 SAYNMIRQMNIKPTASLWSAILGACSIYGNTSLG 522
+ + K S WS ++ A + +G++ G
Sbjct: 419 DTVGVFAAIRDKSLVS-WSTLIAAYAQHGHSRTG 451
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 199/560 (35%), Positives = 311/560 (55%), Gaps = 12/560 (2%)
Query: 28 LDPSTYMSLL----QFCIDKKAERQAHLIHAHIITNGYESN-LHLSTKVIIFYAKVGDVL 82
++ +Y+ LL +F + ++ R+ +HAH+I G N + + ++ YAK G +
Sbjct: 380 INSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIA 439
Query: 83 SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA 142
A F+ M E++ VSW ++ISG QN E+A F M R+G + FT S L +CA
Sbjct: 440 DACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCA 499
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
+ W+ G I K ++ V +ALL LYA+ G + +F + D VSWN+
Sbjct: 500 SLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNS 559
Query: 203 MIGGLA-MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS-QIHDLIIK 260
+IG L+ + + F MMR G T +IL A V + L ++S QIH L++K
Sbjct: 560 VIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSA-VSSLSLHEVSHQIHALVLK 618
Query: 261 LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT-DIISCTALISGFARDDNHSKEAF 319
L + +L+ Y K G + +++ M +T D +S ++ISG+ ++ K A
Sbjct: 619 YCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHK-AM 677
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMY 379
DL M+ K +D +L+ CA+VA+L G ++HA + D VG+AL+DMY
Sbjct: 678 DLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMY 737
Query: 380 AKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFL 439
+K G I A+R F+ M +NV SW S+I+GYA+HG+G +A++L+ +M +G P+ VTF+
Sbjct: 738 SKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFV 797
Query: 440 SLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
+L ACSH G EG+E F M YR+ PR EHFSC+VDL R G+L+ + I M +
Sbjct: 798 GVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPM 857
Query: 500 KPTASLWSAILGACSIYG--NTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNAR 557
KP +W +LGAC NT LG AA L ++EP+ +VNYV+L+N+Y + W++
Sbjct: 858 KPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVA 917
Query: 558 KTRKLMEERSLRKNPGYSFL 577
K R M+E +++K G S++
Sbjct: 918 KARTAMKEAAVKKEAGCSWV 937
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 254/509 (49%), Gaps = 23/509 (4%)
Query: 23 CPDTLLDPS-TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDV 81
C TL S T+ SL+ +A +H I G+ NL LS +I Y ++GD+
Sbjct: 63 CNTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDL 122
Query: 82 LSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC 141
SA+K FD M RN+V+W +ISGY QNG + A F M+R+G N + + SALRAC
Sbjct: 123 GSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRAC 182
Query: 142 ARM--RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC-GWIEDAWILFERIERKDVV 198
+ G I G I K R+ ++ V + L+ +Y C DA +F+ I ++ +
Sbjct: 183 QESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSI 242
Query: 199 SWNAMIGGLAMQGFNDDSFWLFRSMMRQGM----KPDCFTLGSILRASVGGIE--LMKIS 252
SWN++I + +G ++ LF SM ++G+ KP+ +T GS++ + ++ L +
Sbjct: 243 SWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLE 302
Query: 253 QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDD 312
Q+ + K G ++ +L+ +A++G A ++ M +++S L+ G +
Sbjct: 303 QMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQK 362
Query: 313 NHSKEA--FDLFKDMILKKMGIDDVILCLMLNICANVASLN----LGRQIHAFAFKYQ-S 365
A F KD++ GI+ ++L+ + + L GR++HA + +
Sbjct: 363 QGEAAAKVFHEMKDLV----GINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLN 418
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKK 425
A+GN L++MYAKSG IADA F+ M +K+ +SW SLI+G ++ +A E + +
Sbjct: 419 DNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHR 478
Query: 426 MKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRG 485
M+ G +P++ T +S L +C+ G G ++ D + K + + ++ L+A G
Sbjct: 479 MRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGL-KLGLDTDVSVSNALLALYAETG 537
Query: 486 QLESAYNMIRQMNIKPTASLWSAILGACS 514
+ M S W++++GA S
Sbjct: 538 CFTECLKVFSLMPEYDQVS-WNSVIGALS 565
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 189/537 (35%), Positives = 306/537 (56%), Gaps = 21/537 (3%)
Query: 58 TNGYESNLHLSTKVIIFYAKVGDVL-SARKAFDRMPERNVVSWTAMISGYAQNGYDENAL 116
T +ES++ + +I + K + +A K FD+M E NVV+WT MI+ Q G+ A+
Sbjct: 195 TGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAI 254
Query: 117 LVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLY 176
F M+ SG +++FT SS ACA + L G+ + + V++ V+ +L+D+Y
Sbjct: 255 RFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMY 312
Query: 177 AKC---GWIEDAWILFERIERKDVVSWNAMIGG------LAMQGFNDDSFWLFRSMMRQG 227
AKC G ++D +F+R+E V+SW A+I G LA + N LF M+ QG
Sbjct: 313 AKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAIN-----LFSEMITQG 367
Query: 228 -MKPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRS 285
++P+ FT S +A G + ++ Q+ K GL S++ + S+I ++ K +
Sbjct: 368 HVEPNHFTFSSAFKA-CGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMED 426
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
A + + S+ + +++S + G R+ N ++AF L ++ +++G+ +L+ A
Sbjct: 427 AQRAFESLSEKNLVSYNTFLDGTCRNLNF-EQAFKLLSEITERELGVSAFTFASLLSGVA 485
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
NV S+ G QIH+ K S + V NALI MY+K G I A+R F+ M ++NVISWTS
Sbjct: 486 NVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTS 545
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
+I G+AKHG+ +E + +M EG+ PN+VT++++L ACSH GL EGW F M +
Sbjct: 546 MITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDH 605
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
+I P+ EH++C+VDL R G L A+ I M + +W LGAC ++ NT LG+LA
Sbjct: 606 KIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLA 665
Query: 526 ARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
AR + +++P + Y+ LSNIY AG W+ + + R+ M+ER+L K G S+++ K
Sbjct: 666 ARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDK 722
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 147/537 (27%), Positives = 267/537 (49%), Gaps = 44/537 (8%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D T+ SLL+ CI + R L+HA +I E + L +I Y+K GD A
Sbjct: 60 MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDV 119
Query: 88 FD---RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
F+ R +R+VVSW+AM++ Y NG + +A+ VF L G+ N + Y++ +RAC+
Sbjct: 120 FETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNS 179
Query: 145 RWLQGGRMIQGSIQK-GRFVENLFVKSALLDLYAKC-GWIEDAWILFERIERKDVVSWNA 202
++ GR+ G + K G F ++ V +L+D++ K E+A+ +F+++ +VV+W
Sbjct: 180 DFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTL 239
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
MI GF ++ F M+ G + D FTL S+ A L Q+H I+ G
Sbjct: 240 MITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSG 299
Query: 263 LESSNKLTGSLIDVYAKY---GSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
L + + SL+D+YAK GS+ +++ M ++S TALI+G+ ++ N + EA
Sbjct: 300 L--VDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAI 357
Query: 320 DLFKDMILK-KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDM 378
+LF +MI + + + C N++ +G+Q+ AFK + +++V N++I M
Sbjct: 358 NLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISM 417
Query: 379 YAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTF 438
+ KS + DA RAF+ + +KN++S+ + + G ++ +A +L ++ + + TF
Sbjct: 418 FVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTF 477
Query: 439 LSLLFACSHTGLTCEGWELFTDMI-------------------------NKYRILPRAEH 473
SLL ++ G +G ++ + ++ R+ E+
Sbjct: 478 ASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMEN 537
Query: 474 -----FSCVVDLFARRG---QLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLG 522
++ ++ FA+ G ++ +N + + +KP + AIL ACS G S G
Sbjct: 538 RNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEG 594
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 221/465 (47%), Gaps = 56/465 (12%)
Query: 65 LHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLR 124
++++ ++I+ + GD+ A A D M A++G + FS++L+
Sbjct: 26 INVADRLILRHLNAGDLRGAVSALDLM---------------ARDGIRPMDSVTFSSLLK 70
Query: 125 SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG---W 181
S +RA F R+ L R+I+ I+ + N +L+ LY+K G
Sbjct: 71 SCIRARDF----------RLGKLVHARLIEFDIEPDSVLYN-----SLISLYSKSGDSAK 115
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
ED + R ++DVVSW+AM+ G D+ +F + G+ P+ + +++RA
Sbjct: 116 AEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRA 175
Query: 242 SVGGIELMKISQIH-DLIIKLGLESSNKLTG-SLIDVYAK-YGSIRSAYQLYRSMLKTDI 298
+ + + ++ ++K G S+ G SLID++ K S +AY+++ M + ++
Sbjct: 176 CSNS-DFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNV 234
Query: 299 ISCTALIS-----GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG 353
++ T +I+ GF R EA F DM+L D L + + CA + +L+LG
Sbjct: 235 VTWTLMITRCMQMGFPR------EAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288
Query: 354 RQIHAFAFKYQSSYDAAVGNALIDMYAK---SGEIADANRAFDEMGDKNVISWTSLIAGY 410
+Q+H++A + S V +L+DMYAK G + D + FD M D +V+SWT+LI GY
Sbjct: 289 KQLHSWAIR--SGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGY 346
Query: 411 AKH-GYGHEAIELYKKMKHEGMV-PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
K+ EAI L+ +M +G V PN TF S AC + G ++ K +
Sbjct: 347 MKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAF-KRGLA 405
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGAC 513
+ + V+ +F + ++E A ++ K S + + G C
Sbjct: 406 SNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTC 450
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 92/177 (51%), Gaps = 2/177 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ SLL + + R+ IH+ ++ G N + +I Y+K G + +A + F+ M
Sbjct: 476 TFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFM 535
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL-QGG 150
RNV+SWT+MI+G+A++G+ L F+ M+ GV+ N+ TY + L AC+ + + +G
Sbjct: 536 ENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGW 595
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGG 206
R + + + + ++DL + G + DA+ + + DV+ W +G
Sbjct: 596 RHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGA 652
>gi|297848206|ref|XP_002891984.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337826|gb|EFH68243.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 611
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 185/517 (35%), Positives = 296/517 (57%), Gaps = 9/517 (1%)
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
L+T +I+ Y + G V AR FD MPER+VV+WTAMI+GYA + Y+ A F M + G
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPERDVVAWTAMITGYASSNYNSCAWECFHEMFKQG 106
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG-WIEDA 185
N+FT SS L++C M+ L G ++ G + K +L+V +AL+++YA C +E A
Sbjct: 107 RSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTMEAA 166
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG--MKPDCFTLGSILRASV 243
+++F I+ K+ V+W +I G G +++ M+ + + P C T+ AS+
Sbjct: 167 FLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENADVTPYCITIAVRASASI 226
Query: 244 GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTA 303
+ K QIH ++K G +S+ + S++D Y + G + A + + M D+I+
Sbjct: 227 DSVTTGK--QIHASVVKRGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEMEDKDLITWNT 284
Query: 304 LISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY 363
LIS R D S EA +F+ + + ++ CAN+A+LN G+Q+H ++
Sbjct: 285 LISELERSD--SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIYRR 342
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK-NVISWTSLIAGYAKHGYGHEAIEL 422
+ + + NALIDMYAK G+I D+ R F E+ ++ N++SWTS++ GY HGYG EA+EL
Sbjct: 343 GFNKNVELANALIDMYAKCGDIPDSERVFGEIEERRNLVSWTSMMIGYGSHGYGAEAVEL 402
Query: 423 YKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFA 482
+ KM G+ P+ + F+++L AC H GL +G + F M ++Y I P + ++CVVDL
Sbjct: 403 FDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLG 462
Query: 483 RRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSL-GELAARNLFDMEPEKSVNYV 541
R G++ AY ++ +M KP S W AILGAC + +T L LAA+ + +++P YV
Sbjct: 463 RAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHTGLISRLAAKKVMELKPRMVGTYV 522
Query: 542 VLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+LS IY A G W + RK+M +K G S+++
Sbjct: 523 MLSYIYAAEGKWVEFARVRKMMRMMGNKKEAGMSWIE 559
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 192/388 (49%), Gaps = 6/388 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR-KAFDR 90
T S+L+ C + K L+H ++ G E +L++ ++ YA + A F
Sbjct: 113 TLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTMEAAFLIFRD 172
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+ +N V+WT +I+G+ G L ++ ML + + A+RA A + + G
Sbjct: 173 IKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENADVTPYCITIAVRASASIDSVTTG 232
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ I S+ K F NL V +++LD Y +CG++ +A F +E KD+++WN +I L +
Sbjct: 233 KQIHASVVKRGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEMEDKDLITWNTLISELE-R 291
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
+ ++ +F+ QG P+C+T S++ A L Q+H I + G + +L
Sbjct: 292 SDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIYRRGFNKNVELA 351
Query: 271 GSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+LID+YAK G I + +++ + + +++S T+++ G+ + EA +LF M+
Sbjct: 352 NALIDMYAKCGDIPDSERVFGEIEERRNLVSWTSMMIGYG-SHGYGAEAVELFDKMVSSG 410
Query: 330 MGIDDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ D ++ +L+ C + + G + + +Y + D + N ++D+ ++G+I +A
Sbjct: 411 IRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEA 470
Query: 389 NRAFDEMGDK-NVISWTSLIAGYAKHGY 415
+ M K + +W +++ H +
Sbjct: 471 YELVERMPFKPDESTWGAILGACKAHKH 498
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 179/522 (34%), Positives = 299/522 (57%), Gaps = 14/522 (2%)
Query: 63 SNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAM 122
+++ + +I +AK GD+++ R+ FD + ER VV WT +I+ YAQ+GY + A+ +F M
Sbjct: 187 TDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDM 246
Query: 123 LRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG-- 180
L +G + +Q+T SS L AC + + G+ + + + V L+D+YAK
Sbjct: 247 LENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNG 306
Query: 181 -WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFW-LFRSMMRQGMKPDCFTLGSI 238
+ +A +F R+ + +V++W A++ G +G D+ LF M+ +G++P+ T S+
Sbjct: 307 QSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSM 366
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
L+A + QIH +K L N + +L+ +YA+ GSI A + + + ++
Sbjct: 367 LKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNM 426
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKM--GIDDVILCLMLNICANVASLNLGRQI 356
+S + + G R + ++D +++M GI +++ A+V L G+++
Sbjct: 427 VSFSGNLDGDGRSNT--------YQDYQIERMELGISTFTFGSLISAAASVGMLTKGQRL 478
Query: 357 HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYG 416
HA + K D A+GN+L+ MY++ G + DA + FDEM D NVISWTS+I+G AKHGY
Sbjct: 479 HALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYA 538
Query: 417 HEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSC 476
A+EL+ M G+ PNDVT++++L ACSH GL EG E F M + ++PR EH++C
Sbjct: 539 ARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYAC 598
Query: 477 VVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEK 536
+VDL R G +E A + I +M + A +W +LGAC + N +GE+AA ++ +EP+
Sbjct: 599 MVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQD 658
Query: 537 SVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
YV+LSN+Y AG WD + R LM +++L K G S++
Sbjct: 659 PAPYVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMH 700
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 158/538 (29%), Positives = 278/538 (51%), Gaps = 43/538 (7%)
Query: 52 IHAHIITNG--YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPE--RNVVSWTAMISGYA 107
+ H++ G E++ ++ ++ Y+K V +AR FD MP R++VSWTAM S +
Sbjct: 69 LQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMASCLS 128
Query: 108 QNGYDENALLVFSAMLRSGVRANQFTYSSALRAC--ARMRWLQGGRMIQGSIQKGRFVEN 165
+NG + AL +F L G+ N FT +A +AC + + L GG ++ + G + +
Sbjct: 129 RNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFWGTD 188
Query: 166 LFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR 225
+ V AL+D++AK G + +F+ + + VV W +I A G++D++ LF M+
Sbjct: 189 VSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLE 248
Query: 226 QGMKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKY--- 280
G +PD +TL S+L A +G L + Q+H L ++LGLES + ++ L+D+YAK
Sbjct: 249 NGFQPDQYTLSSMLSACTELGSFRLGQ--QLHSLALRLGLESDSCVSCGLVDMYAKSHNG 306
Query: 281 GSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLM 340
S+ +A +++ M K ++++ TAL+SG+ + + + LF M+ + + + + M
Sbjct: 307 QSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSM 366
Query: 341 LNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNV 400
L CAN+ + GRQIH K + VGNAL+ MYA+SG I +A AFD++ +KN+
Sbjct: 367 LKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNM 426
Query: 401 ISWTSLIAGYAK----HGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWE 456
+S++ + G + Y E +EL G+ + TF SL+ A + G+ +G
Sbjct: 427 VSFSGNLDGDGRSNTYQDYQIERMEL-------GI--STFTFGSLISAAASVGMLTKGQR 477
Query: 457 LFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIY 516
L + RA S +V +++R G L A + +MN S W++++ + +
Sbjct: 478 LHALSLKAGFGSDRAIGNS-LVSMYSRCGYLVDACQVFDEMNDHNVIS-WTSMISGLAKH 535
Query: 517 GNTSLGELAARNL---FDM-----EPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
G AAR L DM +P V Y+ + + + AG ++ ++M++
Sbjct: 536 G------YAARALELFHDMIAAGVKP-NDVTYIAVLSACSHAGLVKEGKEHFRMMQKH 586
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 85/156 (54%), Gaps = 2/156 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HA + G+ S+ + ++ Y++ G ++ A + FD M + NV+SWT+MISG A++GY
Sbjct: 478 LHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGY 537
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGR-FVENLFVKS 170
AL +F M+ +GV+ N TY + L AC+ ++ G+ +QK + + +
Sbjct: 538 AARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYA 597
Query: 171 ALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIG 205
++DL + G +EDA + + D + W ++G
Sbjct: 598 CMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLG 633
>gi|357118484|ref|XP_003560984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like [Brachypodium distachyon]
Length = 678
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 178/524 (33%), Positives = 293/524 (55%), Gaps = 2/524 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H ++ G +L + ++ YAK GD+ +ARK FDR+P+RNVVSWT+M+SG QNG
Sbjct: 150 LHCDVVKAG-GGDLFVMNNLVDMYAKGGDLKNARKVFDRIPDRNVVSWTSMLSGCLQNGL 208
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ L++F+ M + + +++T +S L AC + L GR+I GS+ K V N F+ +A
Sbjct: 209 AKEGLVLFNEMRQESILPSEYTMASVLMACTMLGSLHQGRLIHGSVMKHGLVSNHFITAA 268
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
+LD+Y KCG EDA +F+ + D+V W MI G G D+ LF + P+
Sbjct: 269 MLDMYVKCGEAEDARQVFDELSFVDLVLWTTMIVGYTQNGSPLDALLLFVDDKFMRIVPN 328
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
T+ ++L AS L IH + +KLG ++ + +L+D+YAK ++ A ++
Sbjct: 329 SVTIATVLSASAQLRNLSLGRSIHGISVKLGAVENDVVMNALVDMYAKCKALSDAKGIFG 388
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
+L D+++ +LI+G+A +D S +A LF M ++ D + + L+ C + L
Sbjct: 389 RVLNKDVVTWNSLIAGYAENDMGS-DALMLFSHMRVQGSLPDAISVVNALSACVCLGDLL 447
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
+G+ H +A K+ + V AL+++Y K ++ A R F EM D+N ++W ++I GY
Sbjct: 448 IGKCFHTYAVKHAFMSNIYVNTALLNLYNKCADLPSAQRVFSEMNDRNTVTWGAMIGGYG 507
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
G +I+L+ +M + + PN+ F S+L CSHTG+ G + F M + + I P
Sbjct: 508 MQGDSAGSIDLFNEMLKDNIQPNEAVFTSILSTCSHTGMVTVGKKCFESMAHYFNITPSM 567
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
+H++C+VD+ AR G LE A I++M ++ S+W A L C ++ E A +
Sbjct: 568 KHYACMVDVLARAGNLEEALEFIQKMPMQADTSIWQAFLHGCKLHSRLEFAEEAVNRMMV 627
Query: 532 MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYS 575
+ P+ V++SN+YT+ G WD + RKLM+ER L K PG S
Sbjct: 628 LHPDTPDFCVMMSNLYTSYGRWDKSLAIRKLMKERGLVKLPGCS 671
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 145/518 (27%), Positives = 267/518 (51%), Gaps = 19/518 (3%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
LL C + R +HA ++ +G L TK++ YA +GD+ SAR+ D P +
Sbjct: 34 LLPACTTLPSLRA---LHARLLAHGLLRGLRAHTKLLSCYAALGDLASARRVLDETPHPD 90
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLR--SGVRANQFTYSSALRACARMRWLQGGRMI 153
++ + +A G A+ V M R + + S AL+A R GR +
Sbjct: 91 AYTYKVALGWHAAAGRHAEAVAVHRDMRRRCPAEQEDVVVLSLALKAAVRSADFGYGRRL 150
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN 213
+ K +LFV + L+D+YAK G +++A +F+RI ++VVSW +M+ G G
Sbjct: 151 HCDVVKAGG-GDLFVMNNLVDMYAKGGDLKNARKVFDRIPDRNVVSWTSMLSGCLQNGLA 209
Query: 214 DDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSL 273
+ LF M ++ + P +T+ S+L A L + IH ++K GL S++ +T ++
Sbjct: 210 KEGLVLFNEMRQESILPSEYTMASVLMACTMLGSLHQGRLIHGSVMKHGLVSNHFITAAM 269
Query: 274 IDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGID 333
+D+Y K G A Q++ + D++ T +I G+ ++ + +A LF D ++ +
Sbjct: 270 LDMYVKCGEAEDARQVFDELSFVDLVLWTTMIVGYTQNGS-PLDALLLFVDDKFMRIVPN 328
Query: 334 DVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFD 393
V + +L+ A + +L+LGR IH + K + + V NAL+DMYAK ++DA F
Sbjct: 329 SVTIATVLSASAQLRNLSLGRSIHGISVKLGAVENDVVMNALVDMYAKCKALSDAKGIFG 388
Query: 394 EMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCE 453
+ +K+V++W SLIAGYA++ G +A+ L+ M+ +G +P+ ++ ++ L AC G
Sbjct: 389 RVLNKDVVTWNSLIAGYAENDMGSDALMLFSHMRVQGSLPDAISVVNALSACVCLGDLLI 448
Query: 454 GWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGAC 513
G + F K+ + + +++L+ + L SA + +MN + T + W A++G
Sbjct: 449 G-KCFHTYAVKHAFMSNIYVNTALLNLYNKCADLPSAQRVFSEMNDRNTVT-WGAMIGGY 506
Query: 514 SIYGNTSLGELAARNLF------DMEPEKSVNYVVLSN 545
+ G+++ + +LF +++P ++V +LS
Sbjct: 507 GMQGDSA----GSIDLFNEMLKDNIQPNEAVFTSILST 540
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 198/401 (49%), Gaps = 5/401 (1%)
Query: 30 PSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
PS Y S+L C + Q LIH ++ +G SN ++ ++ Y K G+ AR+
Sbjct: 226 PSEYTMASVLMACTMLGSLHQGRLIHGSVMKHGLVSNHFITAAMLDMYVKCGEAEDARQV 285
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD + ++V WT MI GY QNG +ALL+F + N T ++ L A A++R L
Sbjct: 286 FDELSFVDLVLWTTMIVGYTQNGSPLDALLLFVDDKFMRIVPNSVTIATVLSASAQLRNL 345
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
GR I G K VEN V +AL+D+YAKC + DA +F R+ KDVV+WN++I G
Sbjct: 346 SLGRSIHGISVKLGAVENDVVMNALVDMYAKCKALSDAKGIFGRVLNKDVVTWNSLIAGY 405
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A D+ LF M QG PD ++ + L A V +L+ H +K S+
Sbjct: 406 AENDMGSDALMLFSHMRVQGSLPDAISVVNALSACVCLGDLLIGKCFHTYAVKHAFMSNI 465
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ +L+++Y K + SA +++ M + ++ A+I G+ + S + DLF +M+
Sbjct: 466 YVNTALLNLYNKCADLPSAQRVFSEMNDRNTVTWGAMIGGYGMQGD-SAGSIDLFNEMLK 524
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQ-IHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ ++ + +L+ C++ + +G++ + A + + ++D+ A++G +
Sbjct: 525 DNIQPNEAVFTSILSTCSHTGMVTVGKKCFESMAHYFNITPSMKHYACMVDVLARAGNLE 584
Query: 387 DANRAFDEMGDKNVIS-WTSLIAGYAKHGYGHEAIELYKKM 426
+A +M + S W + + G H A E +M
Sbjct: 585 EALEFIQKMPMQADTSIWQAFLHGCKLHSRLEFAEEAVNRM 625
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 185/556 (33%), Positives = 312/556 (56%), Gaps = 6/556 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T +S+ + C + + R +H +++ ESN L+ +I+ Y K+GD+ SA + F
Sbjct: 200 DSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLF 259
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ +P R WT MIS Y Q+G + AL VF+ M + NQ T L ACAR+ ++
Sbjct: 260 ENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVK 319
Query: 149 GGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
GR + G I++ E F+ AL++LYA G + D +FE I+ K ++SWN +I
Sbjct: 320 EGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIF 379
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI-SQIHDLIIKLGLESS 266
G +++ LF M QG+ PD + ++ G I ++ +QIH IIK G +
Sbjct: 380 TRNGQPEEALLLFVQMQTQGLMPD-SYSLASSLSACGTISFSQLGAQIHGYIIKTG-NFN 437
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ + +LID+YAK G + SA +++ + + +++ ++I GF+++ +S EA LF M
Sbjct: 438 DFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQN-GYSVEAITLFDQMY 496
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ + +D + ++ C+++ L G+ +H Y D+ + AL DMY+K GE+
Sbjct: 497 MNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQ 556
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A+ FD M +++++SW+ +IAGY HG + I L+ +M G+ PND+TF+ +L ACS
Sbjct: 557 MAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACS 616
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
H G EG +L+ + ++++ + P+ +HF+C+VDL +R G L AY +I + +S+W
Sbjct: 617 HAGAVEEG-KLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIW 675
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
A+L C I+ + + +NL D++ + Y +LSNIY G WD K R +M+ +
Sbjct: 676 GALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSK 735
Query: 567 SLRKNPGYSFLQSSKK 582
LRK PGYS ++ KK
Sbjct: 736 GLRKVPGYSTIEIDKK 751
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 150/541 (27%), Positives = 267/541 (49%), Gaps = 39/541 (7%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H +I G+ES+ + T ++ Y ++ + A KAFD MP R+VV+W++++ + QNG
Sbjct: 122 VHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQ 181
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
L +FS M+ V + T S AC+ + L+ GR + G + + N + ++
Sbjct: 182 ASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNS 241
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+ +Y K G + A LFE + + W MI G ++ +F M M+P+
Sbjct: 242 LIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPN 301
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG-SLIDVYAKYGSIRSAYQLY 290
T+ +L A + + +H +I+ ++ G +L+++YA G++R ++++
Sbjct: 302 QVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVF 361
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
++ + I+S LIS F R + +EA LF M + + D L L+ C ++
Sbjct: 362 ETIKEKTILSWNTLISIFTR-NGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFS 420
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
LG QIH + K +++ V NALIDMYAK G + AN+ F+++ +K++++W S+I G+
Sbjct: 421 QLGAQIHGYIIK-TGNFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGF 479
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG-W-------------- 455
+++GY EAI L+ +M + + +TFLS++ ACSH G +G W
Sbjct: 480 SQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDS 539
Query: 456 ---ELFTDMINKYRILPRAE------------HFSCVVDLFARRGQLESAYNMIRQM--- 497
TDM +K L A +S ++ + GQ+ + ++ QM
Sbjct: 540 YLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGS 599
Query: 498 NIKPTASLWSAILGACSIYGNTSLGELAARNL--FDMEPEKSVNYVVLSNIYTAAGAWDN 555
IKP + IL ACS G G+L ++ F +EP K ++ + ++ + AG +
Sbjct: 600 GIKPNDITFMHILSACSHAGAVEEGKLYFNSMSEFGVEP-KHDHFACMVDLLSRAGDLNG 658
Query: 556 A 556
A
Sbjct: 659 A 659
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/488 (26%), Positives = 246/488 (50%), Gaps = 22/488 (4%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
YM L + C Q +HAH+ G + STK+I YA++G S+++ FD P
Sbjct: 4 YMPLFRRCATSTTLTQ---LHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFP 60
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAML-RSGVRANQFTYSSALRACARMRWLQGGR 151
+ + W +I Y G+ E A+ ++ M+ + + + F + S L+AC+ L G
Sbjct: 61 KPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGG 120
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ G + K F + V+++LL +Y + ++DA F+ + +DVV+W++++ G
Sbjct: 121 KVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNG 180
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGLESSNKL 269
+ +F M+ + ++PD T+ S+ A +G + L + +H +++ +ES+ L
Sbjct: 181 QASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGR--SVHGYVVRREIESNASL 238
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
SLI +Y K G + SA +L+ ++ T +IS + + +EA ++F M K
Sbjct: 239 NNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCF-QEALNVFAKMQEFK 297
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA-VGNALIDMYAKSGEIADA 388
M + V + +L CA + + GR +H F + + +G AL+++YA +G + D
Sbjct: 298 MEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDC 357
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC--- 445
++ F+ + +K ++SW +LI+ + ++G EA+ L+ +M+ +G++P+ + S L AC
Sbjct: 358 HKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTI 417
Query: 446 --SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
S G G+ + T N + + ++D++A+ G + SA M ++ K
Sbjct: 418 SFSQLGAQIHGYIIKTGNFNDFVQ-------NALIDMYAKCGFVHSANKMFEKIKEKSLV 470
Query: 504 SLWSAILG 511
+ S I G
Sbjct: 471 TWNSMICG 478
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 147/315 (46%), Gaps = 10/315 (3%)
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR 310
++Q+H + GL + LI+ YA+ G S+ +++ + K D LI +
Sbjct: 17 LTQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVW 76
Query: 311 DDNHSKEAFDLFKDMILK-KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDA 369
+EA L+ +M+ + + I + + +L C+ L++G ++H K DA
Sbjct: 77 G-GFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDA 135
Query: 370 AVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE 429
V +L+ MY + + DA +AFD M ++V++W+S++ + ++G E ++++ +M E
Sbjct: 136 VVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISE 195
Query: 430 GMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLES 489
+ P+ VT LS+ ACS G G + ++ + I A + ++ ++ + G L S
Sbjct: 196 AVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRR-EIESNASLNNSLIVMYGKLGDLYS 254
Query: 490 AYNMIRQMNIKPTASLWSAILGACSIYG--NTSLGELAARNLFDMEPEKSVNYVVLSNIY 547
A + + + TA W+ ++ + G +L A F MEP N V + +
Sbjct: 255 AERLFENVPCRMTAP-WTPMISCYNQSGCFQEALNVFAKMQEFKMEP----NQVTMVGVL 309
Query: 548 TAAGAWDNARKTRKL 562
A ++ R +
Sbjct: 310 CACARLGRVKEGRSV 324
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 193/535 (36%), Positives = 305/535 (57%), Gaps = 12/535 (2%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IHAH G ++L +ST +I Y + A F +MP R+VV+W AM++GYA +G
Sbjct: 121 IHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGM 180
Query: 112 DENALLVFSAML-RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVEN---LF 167
+A+ M R G+R N T S L A+ L G + + +N +
Sbjct: 181 YHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVL 240
Query: 168 VKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
+ +ALLD+YAKC + A +F + ++ V+W+A+IGG + ++F LF+ M+ +G
Sbjct: 241 IGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEG 300
Query: 228 MKPDCF----TLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
M CF ++ S LR +L +Q+H L+ K G+ + SL+ +YAK G I
Sbjct: 301 M---CFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLI 357
Query: 284 RSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNI 343
A L+ + D IS AL+SG+ ++ ++EAF +FK M + D + ++
Sbjct: 358 NEATMLFDEIAIKDTISYGALLSGYVQNGK-AEEAFLVFKKMQACNVQPDIATMVSLIPA 416
Query: 344 CANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISW 403
C+++A+L GR H + + ++ N+LIDMYAK G I + + FD+M ++++SW
Sbjct: 417 CSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSW 476
Query: 404 TSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMIN 463
++IAGY HG G EA L+ MK++G P+DVTF+ L+ ACSH+GL EG F M +
Sbjct: 477 NTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTH 536
Query: 464 KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGE 523
KY ILPR EH+ C+VDL AR G L+ AY I+ M +K +W A+LGAC I+ N LG+
Sbjct: 537 KYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGK 596
Query: 524 LAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+R + + PE + N+V+LSNI++AAG +D A + R + + + +K+PG S+++
Sbjct: 597 QVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGCSWIE 651
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 144/475 (30%), Positives = 250/475 (52%), Gaps = 17/475 (3%)
Query: 79 GDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSAL 138
G + AR+ FDR+P + ++ A+I Y+ G A+ ++ +ML V N++T+ L
Sbjct: 47 GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 139 RACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVV 198
+AC+ + L GR I +LFV +AL+DLY +C A +F ++ +DVV
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166
Query: 199 SWNAMIGGLAMQGFNDDSFWLFRSMM-RQGMKPDCFTLGSILRASVGGIELMKISQIHDL 257
+WNAM+ G A G + M R G++P+ TL S+L L + + +H
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAY 226
Query: 258 IIKLGLESSNK--LTGS-LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH 314
++ L+ + + L G+ L+D+YAK + A +++ M + ++ +ALI GF D
Sbjct: 227 CLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRM 286
Query: 315 SKEAFDLFKDMILKKMG-IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN 373
+ EAF+LFKDM+++ M + + L +CA++A L +G Q+HA K D GN
Sbjct: 287 T-EAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGN 345
Query: 374 ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP 433
+L+ MYAK+G I +A FDE+ K+ IS+ +L++GY ++G EA ++KKM+ + P
Sbjct: 346 SLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQP 405
Query: 434 NDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNM 493
+ T +SL+ ACSH G +I + L + S ++D++A+ G+++ + +
Sbjct: 406 DIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNS-LIDMYAKCGRIDLSRQV 464
Query: 494 IRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDM-----EPEKSVNYVVL 543
+M + S W+ ++ I+G LG+ A M EP+ V ++ L
Sbjct: 465 FDKMPARDIVS-WNTMIAGYGIHG---LGKEATTLFLSMKNQGFEPD-DVTFICL 514
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 140/275 (50%), Gaps = 4/275 (1%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L ++ S L+ C R +HA + +G ++L ++ YAK G + A
Sbjct: 303 FLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATM 362
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FD + ++ +S+ A++SGY QNG E A LVF M V+ + T S + AC+ +
Sbjct: 363 LFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAA 422
Query: 147 LQGGRMIQGS-IQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
LQ GR GS I +G +E S L+D+YAKCG I+ + +F+++ +D+VSWN MI
Sbjct: 423 LQHGRCSHGSVIIRGLALETSICNS-LIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIA 481
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLE 264
G + G ++ LF SM QG +PD T ++ A S G+ + K G+
Sbjct: 482 GYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGIL 541
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDI 298
+ ++D+ A+ G + AYQ +SM LK D+
Sbjct: 542 PRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADV 576
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 23/167 (13%)
Query: 376 IDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND 435
++ + G++A A + FD + + ++ +LI Y+ G H AI+LY+ M + + PN
Sbjct: 40 LEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNK 99
Query: 436 VTFLSLLFACSHTGLTCEGWE---------LFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
TF +L ACS C G L TD+ + ++DL+ R +
Sbjct: 100 YTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVS----------TALIDLYIRCAR 149
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDME 533
A N+ +M ++ + W+A+L Y N + A +L DM+
Sbjct: 150 FGPAANVFAKMPMRDVVA-WNAMLAG---YANHGMYHHAIAHLLDMQ 192
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 195/581 (33%), Positives = 322/581 (55%), Gaps = 32/581 (5%)
Query: 28 LDPSTY--MSLLQFCID-KKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
+DP+++ +S+ C + R +HA+ + NG + + + ++ YA++G V A
Sbjct: 429 VDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYTNNALVTMYARLGRVNDA 487
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
+ F +++VSW +IS +QN E AL+ M+ GVR + T +S L AC+++
Sbjct: 488 KALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQL 547
Query: 145 RWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
L+ GR I +++ G +EN FV +AL+D+Y C + ++F+ + R+ V WNA+
Sbjct: 548 ERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNAL 607
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQG-MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
+ G A F+D + LF M+ + P+ T S+L A V IH I+K G
Sbjct: 608 LAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRG 667
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFA------------- 309
+ +L+D+Y++ G + + ++ M K DI+S +I+G
Sbjct: 668 FGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLH 727
Query: 310 ----RDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS 365
R + F ++D + V L +L CA +A+L G++IHA+A K +
Sbjct: 728 EMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKL 787
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKK 425
+ D AVG+AL+DMYAK G + A+R FD+M +NVI+W LI Y HG G EA+EL++
Sbjct: 788 AMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRI 847
Query: 426 M------KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD 479
M E + PN+VT++++ ACSH+G+ EG LF M + + PR +H++C+VD
Sbjct: 848 MTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVD 907
Query: 480 LFARRGQLESAYNMIRQM--NIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKS 537
L R G+++ AY +I M N+ + WS++LGAC I+ + GE+AA++LF +EP +
Sbjct: 908 LLGRSGRVKEAYELINTMPSNLNKVDA-WSSLLGACRIHQSVEFGEIAAKHLFVLEPNVA 966
Query: 538 VNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+YV++SNIY++AG WD A RK M+E +RK PG S+++
Sbjct: 967 SHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIE 1007
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/491 (26%), Positives = 240/491 (48%), Gaps = 31/491 (6%)
Query: 52 IHAHIITNGY--ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQN 109
IHAH+ G+ S++ ++ ++ Y K GD+ +AR+ FD +P+R+ VSW +MI+ +
Sbjct: 352 IHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRF 411
Query: 110 GYDENALLVFSAMLRSGVRANQFTYSSALRACARMR-WLQGGRMIQG-SIQKGRFVENLF 167
E +L +F ML V FT S AC+ +R ++ G+ + +++ G +
Sbjct: 412 EEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDL--RTY 469
Query: 168 VKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
+AL+ +YA+ G + DA LF + KD+VSWN +I L+ +++ M+ G
Sbjct: 470 TNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDG 529
Query: 228 MKPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLGLESSNKLTGS-LIDVYAKYGSIRS 285
++PD TL S+L A +E ++I +IH ++ G N G+ L+D+Y +
Sbjct: 530 VRPDGVTLASVLPA-CSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKK 588
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK-KMGIDDVILCLMLNIC 344
++ +++ + AL++G+AR++ +A LF +MI + + + +L C
Sbjct: 589 GRLVFDGVVRRTVAVWNALLAGYARNE-FDDQALRLFVEMISESEFCPNATTFASVLPAC 647
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWT 404
+ IH + K D V NAL+DMY++ G + + F M ++++SW
Sbjct: 648 VRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWN 707
Query: 405 SLIAGYAKHGYGHEAIELYKKMKH---------------EGMV---PNDVTFLSLLFACS 446
++I G G +A+ L +M+ +G V PN VT +++L C+
Sbjct: 708 TMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCA 767
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
+G E+ + K ++ S +VD++A+ G L A + QM I+ + W
Sbjct: 768 ALAALGKGKEIHAYAV-KQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVIT-W 825
Query: 507 SAILGACSIYG 517
+ ++ A ++G
Sbjct: 826 NVLIMAYGMHG 836
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 166/363 (45%), Gaps = 11/363 (3%)
Query: 192 IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI 251
+ER+ W ++ D+ + +M+ PD F ++L+A+ +L
Sbjct: 290 VERRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLG 349
Query: 252 SQIHDLIIKLG--LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFA 309
QIH + K G SS + SL+++Y K G + +A Q++ + D +S ++I+
Sbjct: 350 KQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLC 409
Query: 310 RDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV-ASLNLGRQIHAFAFKYQSSYD 368
R + + + LF+ M+ + + L + + C++V + LG+Q+HA+ +
Sbjct: 410 RFEEW-ELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLR-NGDLR 467
Query: 369 AAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKH 428
NAL+ MYA+ G + DA F K+++SW ++I+ +++ EA+ M
Sbjct: 468 TYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIV 527
Query: 429 EGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLE 488
+G+ P+ VT S+L ACS G E+ + ++ + + +VD++ Q +
Sbjct: 528 DGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPK 587
Query: 489 SAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDM--EPEKSVNYVVLSNI 546
++ ++ T ++W+A+L Y + A R +M E E N +++
Sbjct: 588 KG-RLVFDGVVRRTVAVWNALLAG---YARNEFDDQALRLFVEMISESEFCPNATTFASV 643
Query: 547 YTA 549
A
Sbjct: 644 LPA 646
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 181/571 (31%), Positives = 313/571 (54%), Gaps = 3/571 (0%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K G+LK+A F + D + P +Y L + C ++ LIH + +
Sbjct: 64 KQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGS 123
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ ++ Y G + +K FD M +N+VSW +IS YA+NG E A+ +FS M SG
Sbjct: 124 IENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASG 183
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
+R N Y S L++C +L+ G+ I + + + N+ V++A+ ++Y +CGW+E A
Sbjct: 184 IRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAK 243
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
++F+ ++ ++ V+W ++ G + + LF M +G++ D F +L+ G
Sbjct: 244 LVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLE 303
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
+ QIH I+KLG ES + L+D Y K G I SAY+ + + + + +S +ALIS
Sbjct: 304 DWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALIS 363
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
GF++ ++ +F + + + ++ I + CA A+LN+G Q H A K
Sbjct: 364 GFSQS-GRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLV 422
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
+A++ MY+K G + A RAF+ + + + ++WT++I+GYA HG EA+ +++M
Sbjct: 423 SYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRM 482
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
+ G+ PN VTF+++L ACSH+GL E + M Y + P +H+ C++D ++R G
Sbjct: 483 QSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGL 542
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
L+ A +I +M +P A W ++LG C + + LG++AA NLF ++P + Y++L N+
Sbjct: 543 LQEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNL 602
Query: 547 YTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
Y+A G W+ A RKLM ER L+K S++
Sbjct: 603 YSAFGKWEEAGHVRKLMAERELKKEVSCSWI 633
>gi|357474955|ref|XP_003607763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508818|gb|AES89960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 871
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 179/522 (34%), Positives = 297/522 (56%), Gaps = 9/522 (1%)
Query: 69 TKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR 128
T ++ Y+K G + ARK FD +P+R+VVSWT+MI Y QN E L++F+ M +
Sbjct: 173 TSLVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRMREGFLD 232
Query: 129 ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWIL 188
N FT S + AC ++ L G+ + G + K N ++ ++LL++Y KCG I DA +
Sbjct: 233 GNVFTVGSLVTACTKLGCLHQGKWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDARSV 292
Query: 189 FERIERK------DVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS 242
F+ D+V W AMI G +G+ + LF + P+ TL S+L A
Sbjct: 293 FDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLSAC 352
Query: 243 VGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCT 302
++ +H L++K GL+ ++ L SL+D+YAK G I A+ ++ + + D++S
Sbjct: 353 AQLENIVMGKLLHVLVVKYGLDDTS-LRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWN 411
Query: 303 ALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK 362
++ISG+A+ + + EA DLF M ++ D V + +L+ CA+V + +G +H FA K
Sbjct: 412 SVISGYAQSGS-AYEALDLFNRMRMESFLPDAVTVVGVLSACASVGAHQIGLSLHGFALK 470
Query: 363 YQ-SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIE 421
Y S VG AL++ YAK G+ A FD MG+KN ++W ++I G G G ++
Sbjct: 471 YGLVSSSIYVGTALLNFYAKCGDATSARMVFDGMGEKNAVTWAAMIGGCGMQGDGVGSLA 530
Query: 422 LYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLF 481
L++ M E +VPN+V F +LL ACSH+G+ EG +F M + +P +H++C+VDL
Sbjct: 531 LFRDMLKEELVPNEVVFTTLLAACSHSGMVEEGLMIFDFMCKELNFVPSMKHYACMVDLL 590
Query: 482 ARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYV 541
AR G L+ A + I +M ++P ++ A L C ++ N GE+A R + ++ P+++ YV
Sbjct: 591 ARAGNLQEALDFIDKMPVQPGVGVFGAFLHGCGLHSNFDFGEVAIRRMLELHPDQACYYV 650
Query: 542 VLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKN 583
++SN+Y + G W ++ R+++++R L K PG S ++ N
Sbjct: 651 LISNLYASDGRWGMVKEVREMIKQRGLNKVPGVSLVEMDVNN 692
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 153/537 (28%), Positives = 273/537 (50%), Gaps = 38/537 (7%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L P+ ++S + C K +HA +I +G+ + T +I YA G + AR
Sbjct: 40 LPPTIHLS--RIC---KHPTTVKTLHASLIISGHPPD----TTLISLYASFGFLRHARTL 90
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFS-AMLRSGVRANQFTYSSALRACARMRW 146
F R+P S+ +I + N + + ++ A G + +S L+ +++R
Sbjct: 91 FHRLPSPTHHSFKLIIRWHFLNDVHSHVVSFYNLARTTLGSFNDLVVFSILLKTASQLRD 150
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
+ + +I K ++ FV ++L+D Y+KCG + DA +F+ I + VVSW +MI
Sbjct: 151 IVLTTKLHCNILKSNAADS-FVLTSLVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMIVA 209
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
++ LF M + + FT+GS++ A L + +H +IK G+E +
Sbjct: 210 YVQNECAEEGLMLFNRMREGFLDGNVFTVGSLVTACTKLGCLHQGKWVHGYVIKNGIEIN 269
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKT------DIISCTALISGFARDDNHSKEAFD 320
+ L SL+++Y K G I A ++ + D++ TA+I G+ + + + A +
Sbjct: 270 SYLATSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFWTAMIVGYTQ-RGYPQAALE 328
Query: 321 LFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYA 380
LF D ++ + V L +L+ CA + ++ +G+ +H KY D ++ N+L+DMYA
Sbjct: 329 LFTDKKWYRILPNSVTLASLLSACAQLENIVMGKLLHVLVVKYGLD-DTSLRNSLVDMYA 387
Query: 381 KSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
K G I DA+ F DK+V+SW S+I+GYA+ G +EA++L+ +M+ E +P+ VT +
Sbjct: 388 KCGLIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEALDLFNRMRMESFLPDAVTVVG 447
Query: 441 LLFACS-----HTGLTCEGWELFTDMINKYRILPRAEHF-SCVVDLFARRGQLESAYNMI 494
+L AC+ GL+ G+ L KY ++ + + + +++ +A+ G SA +
Sbjct: 448 VLSACASVGAHQIGLSLHGFAL------KYGLVSSSIYVGTALLNFYAKCGDATSARMVF 501
Query: 495 RQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF-DMEPEKSV-NYVVLSNIYTA 549
M K A W+A++G C + G+ +G LA LF DM E+ V N VV + + A
Sbjct: 502 DGMGEK-NAVTWAAMIGGCGMQGD-GVGSLA---LFRDMLKEELVPNEVVFTTLLAA 553
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 113/374 (30%), Positives = 192/374 (51%), Gaps = 14/374 (3%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T SL+ C Q +H ++I NG E N +L+T ++ Y K GD+ AR FD
Sbjct: 237 TVGSLVTACTKLGCLHQGKWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDARSVFDEF 296
Query: 92 PER------NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
++V WTAMI GY Q GY + AL +F+ + N T +S L ACA++
Sbjct: 297 SVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLSACAQLE 356
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
+ G+++ + K +++ ++++L+D+YAKCG I DA +F KDVVSWN++I
Sbjct: 357 NIVMGKLLHVLVVK-YGLDDTSLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVIS 415
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGL 263
G A G ++ LF M + PD T+ +L ASVG ++ +H +K GL
Sbjct: 416 GYAQSGSAYEALDLFNRMRMESFLPDAVTVVGVLSACASVGAHQIGL--SLHGFALKYGL 473
Query: 264 ESSNKLTGS-LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
SS+ G+ L++ YAK G SA ++ M + + ++ A+I G + + LF
Sbjct: 474 VSSSIYVGTALLNFYAKCGDATSARMVFDGMGEKNAVTWAAMIGGCGMQGD-GVGSLALF 532
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNA-LIDMYAK 381
+DM+ +++ ++V+ +L C++ + G I F K + + A ++D+ A+
Sbjct: 533 RDMLKEELVPNEVVFTTLLAACSHSGMVEEGLMIFDFMCKELNFVPSMKHYACMVDLLAR 592
Query: 382 SGEIADANRAFDEM 395
+G + +A D+M
Sbjct: 593 AGNLQEALDFIDKM 606
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 191/584 (32%), Positives = 325/584 (55%), Gaps = 12/584 (2%)
Query: 3 IVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHII-TN 59
IV A + G ++AL + + D + ++ + C K +Q L+HA I+ T
Sbjct: 29 IVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETQ 88
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
E ++ L T +I YA+ D+ ARK FD M ++ +V+W A+I+GY++NG AL ++
Sbjct: 89 LLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIY 148
Query: 120 SAMLR---SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLY 176
M+ G++ + T+SSAL AC+ + + GR I+ + + V++AL+++Y
Sbjct: 149 QDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMY 208
Query: 177 AKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLG 236
+KCG +E A +F+R++ +DV++WN MI G A QG + LF+ M KP+ T
Sbjct: 209 SKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFI 268
Query: 237 SILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAK-YGSIRSAYQLYRSMLK 295
+L A +L + IH + + G ES + L+++Y K S+ A Q++ +
Sbjct: 269 GLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRT 328
Query: 296 TDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQ 355
D+I+ LI + + +K+A D+FK M L+ + +++ L +L+ CA + + G+
Sbjct: 329 RDVITWNILIVAYVQY-GQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKA 387
Query: 356 IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGY 415
+HA + D + N+L++MY + G + D F + DK+++SW++LIA YA+HG+
Sbjct: 388 VHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGH 447
Query: 416 GHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFS 475
+E + ++ EG+ +DVT +S L ACSH G+ EG + F M+ + + P HF
Sbjct: 448 SRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFL 507
Query: 476 CVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPE 535
C+VDL +R G+LE+A N+I M P A W+++L C ++ +T A LF++E E
Sbjct: 508 CMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESE 567
Query: 536 KSVNYV-VLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+ V +LSN+Y AG WD+ RKTR R+ RKNPG S+++
Sbjct: 568 DEHSTVTLLSNVYAEAGRWDDVRKTRN---RRAARKNPGCSYIE 608
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 240/454 (52%), Gaps = 8/454 (1%)
Query: 74 FYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFT 133
Y K G V A F + N VSWT +++ +A+NG+ AL + M+ G+R +
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 134 YSSALRACARMRWLQGGRMIQGSIQKGRFVE-NLFVKSALLDLYAKCGWIEDAWILFERI 192
+ A+ C+ + L+ G+++ I + + +E ++ + +AL+ +YA+C +E A F+ +
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 193 ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR---QGMKPDCFTLGSILRASVGGIELM 249
+K +V+WNA+I G + G + + +++ M+ +GMKPD T S L A ++
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180
Query: 250 KISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFA 309
+ +I + G S + + +LI++Y+K GS+ SA +++ + D+I+ +ISG+A
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 310 RDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDA 369
+ + +A +LF+ M + V +L C N+ L GR IH ++ D
Sbjct: 241 K-QGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDL 299
Query: 370 AVGNALIDMYAK-SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKH 428
+GN L++MY K S + +A + F+ + ++VI+W LI Y ++G +A++++K+M+
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQL 359
Query: 429 EGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLE 488
E + PN++T ++L AC+ G +G + +I R + +++++ R G L+
Sbjct: 360 ENVAPNEITLSNVLSACAVLGAKRQGKAVHA-LIASGRCKADVVLENSLMNMYNRCGSLD 418
Query: 489 SAYNMIRQMNIKPTASLWSAILGACSIYGNTSLG 522
+ + K S WS ++ A + +G++ G
Sbjct: 419 DTVGVFAAIRDKSLVS-WSTLIAAYAQHGHSRTG 451
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 187/533 (35%), Positives = 302/533 (56%), Gaps = 5/533 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H I G ++++ + ++ Y K G + +AR+ F M +++ V++ AM+ G ++ G
Sbjct: 157 LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGL 216
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
AL +F+AM R+G+ A FT+SS L A M L G + + + V N+FV ++
Sbjct: 217 HTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNS 276
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
LLD Y+KC ++D LF+ + +D VS+N +I A LFR M + G
Sbjct: 277 LLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQ 336
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
++L + ++ QIH ++ LGL S + L +LID+Y+K G + +A +
Sbjct: 337 VLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFS 396
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
+ + IS TALI+G+ ++ H +EA LF DM + D ++ +++A +
Sbjct: 397 NRSEKSAISWTALITGYVQNGQH-EEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIG 455
Query: 352 LGRQIHAFAFKYQSSYDAAV--GNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
LGRQ+H++ + S Y ++V G+ L+DMYAK G + +A R FDEM ++N ISW ++I+
Sbjct: 456 LGRQLHSYLIR--SGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISA 513
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
YA +G AI++++ M H G P+ VTFLS+L ACSH GL E + F M ++Y I P
Sbjct: 514 YAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISP 573
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
EH++CV+D R G M+ +M K +W++IL +C I+GN L +AA L
Sbjct: 574 WKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKL 633
Query: 530 FDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
F MEP + YV+LSNIY AG W++A +K+M +R +RK GYS+++ +K
Sbjct: 634 FGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQK 686
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 136/450 (30%), Positives = 235/450 (52%), Gaps = 20/450 (4%)
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
Y+ GD+ +A+ F P RN +WT M+ +A G +AL +F AML GV ++ T
Sbjct: 84 YSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTV 143
Query: 135 SSALRACARMRWLQGGRM--IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI 192
++ L L G + + K ++FV + LLD Y K G + A +F +
Sbjct: 144 TTVLN-------LPGCTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEM 196
Query: 193 ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS 252
KD V++NAM+ G + +G + + LF +M R G+ FT SIL + G L+
Sbjct: 197 HDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGH 256
Query: 253 QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDD 312
Q+H L+++ + + SL+D Y+K + +L+ M + D +S +I+ +A +
Sbjct: 257 QVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQ 316
Query: 313 NHSKEAFDLFKDMILKKMGIDDVIL--CLMLNICANVASLNLGRQIHAFAFKYQSSYDAA 370
+ LF++M +K+G D +L ML++ ++ +++G+QIHA + +
Sbjct: 317 C-AATVLRLFREM--QKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDL 373
Query: 371 VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG 430
+GNALIDMY+K G + A F +K+ ISWT+LI GY ++G EA++L+ M+ G
Sbjct: 374 LGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAG 433
Query: 431 MVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF--SCVVDLFARRGQLE 488
+ P+ TF S++ A S + G +L + +I R ++ F S +VD++A+ G L+
Sbjct: 434 LRPDRATFSSIIKASSSLAMIGLGRQLHSYLI---RSGYKSSVFSGSVLVDMYAKCGCLD 490
Query: 489 SAYNMIRQMNIKPTASLWSAILGACSIYGN 518
A +M + + S W+A++ A + YG
Sbjct: 491 EALRTFDEMPERNSIS-WNAVISAYAHYGE 519
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 182/395 (46%), Gaps = 5/395 (1%)
Query: 50 HLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQN 109
H +HA ++ + N+ ++ ++ FY+K + R+ FD MPER+ VS+ +I+ YA N
Sbjct: 256 HQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWN 315
Query: 110 GYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK 169
L +F M + G Y++ L + + G+ I + +
Sbjct: 316 QCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLG 375
Query: 170 SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
+AL+D+Y+KCG ++ A F K +SW A+I G G ++++ LF M R G++
Sbjct: 376 NALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLR 435
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
PD T SI++AS + Q+H +I+ G +SS L+D+YAK G + A +
Sbjct: 436 PDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRT 495
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA-NVA 348
+ M + + IS A+IS +A +K A +F+ M+ D V +L C+ N
Sbjct: 496 FDEMPERNSISWNAVISAYAH-YGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGL 554
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK-NVISWTSLI 407
+ + H +Y S +ID + G + + EM K + I WTS++
Sbjct: 555 ADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSIL 614
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
H G++ + K GM P D T +L
Sbjct: 615 HSCRIH--GNQELARVAADKLFGMEPTDATPYVIL 647
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 198/438 (45%), Gaps = 40/438 (9%)
Query: 164 ENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM 223
+N+F + +L Y+ G + A LF ++ +W M+ A G D+ LFR+M
Sbjct: 72 KNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAM 131
Query: 224 MRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
+ +G+ PD T+ ++L + + +H IK GL++ + +L+D Y K+G +
Sbjct: 132 LGEGVIPDRVTVTTVL-----NLPGCTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLL 186
Query: 284 RSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNI 343
+A +++ M D ++ A++ G +++ H+ +A LF M + +L +
Sbjct: 187 AAARRVFLEMHDKDAVTYNAMMMGCSKEGLHT-QALQLFAAMRRAGIPATHFTFSSILTV 245
Query: 344 CANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISW 403
A +A L LG Q+HA + S + V N+L+D Y+K + D R FDEM +++ +S+
Sbjct: 246 AAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSY 305
Query: 404 TSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS-----------HTGLTC 452
+IA YA + + L+++M+ G + + ++L H L
Sbjct: 306 NVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVL 365
Query: 453 EGW-------ELFTDMINKYRILPRAE------------HFSCVVDLFARRGQLESAYNM 493
G DM +K +L A+ ++ ++ + + GQ E A +
Sbjct: 366 LGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQL 425
Query: 494 ---IRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSV-NYVVLSNIYTA 549
+R+ ++P + +S+I+ A S LG L + SV + VL ++Y
Sbjct: 426 FSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAK 485
Query: 550 AGAWDNARKTRKLMEERS 567
G D A +T M ER+
Sbjct: 486 CGCLDEALRTFDEMPERN 503
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 181/532 (34%), Positives = 302/532 (56%), Gaps = 1/532 (0%)
Query: 51 LIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
L+H + +G +++ +S+ +I Y KVG + + F +M +RNVVSWTA+I+G G
Sbjct: 178 LLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAG 237
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
Y+ ALL FS M S V + T++ AL+A A L G+ I K F E+ FV +
Sbjct: 238 YNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVIN 297
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
L +Y KCG + LFE+++ DVVSW +I +G + + F+ M + + P
Sbjct: 298 TLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSP 357
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
+ +T +++ A QIH +++LGL + + S++ +Y+K G ++SA ++
Sbjct: 358 NKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVF 417
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
+ + DIIS + +I+ +++ ++KEAFD M + ++ L +L++C ++A L
Sbjct: 418 HGITRKDIISWSTIIAVYSQG-GYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALL 476
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
G+Q+HA ++A V +ALI MY+K G + +A++ F+ M N+ISWT++I GY
Sbjct: 477 EQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGY 536
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
A+HGY EAI L++K+ G+ P+ VTF+ +L ACSH G+ G+ F M N+Y+I P
Sbjct: 537 AEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGMVDLGFYYFMLMTNEYQISPS 596
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
EH+ C++DL R G+L A +MIR M +WS +L +C ++G+ G A L
Sbjct: 597 KEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVHGDVDRGRWTAEQLL 656
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
++P + ++ L+NIY A G W A RKLM+ + + K G+S++ + K
Sbjct: 657 RLDPNSAGTHIALANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVNVNDK 708
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 154/539 (28%), Positives = 262/539 (48%), Gaps = 29/539 (5%)
Query: 20 SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVG 79
+L P T P T + K E+ A +A+ + N E N L V K G
Sbjct: 52 NLDSPLTYSSPGTATECRELIQQAKQEQLAQ--NAYSVHNMLELNSELKQLV-----KQG 104
Query: 80 DVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAM-LRSGVRANQFTYSSAL 138
+ +R FD+M R+ +SWT +I+GY AL++FS M ++ G++ +QF S AL
Sbjct: 105 QLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMISVAL 164
Query: 139 RACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVV 198
+AC + G ++ G K + ++FV SAL+D+Y K G IE +F+++ +++VV
Sbjct: 165 KACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVV 224
Query: 199 SWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLI 258
SW A+I GL G+N ++ F M + D T L+AS L IH
Sbjct: 225 SWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQT 284
Query: 259 IKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR--DDNHSK 316
IK G + S+ + +L +Y K G +L+ M D++S T LI+ + + ++ H+
Sbjct: 285 IKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAV 344
Query: 317 EAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALI 376
EA FK M + + +++ CAN+A G QIH + +V N+++
Sbjct: 345 EA---FKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIV 401
Query: 377 DMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDV 436
+Y+KSG + A+ F + K++ISW+++IA Y++ GY EA + M+ EG PN+
Sbjct: 402 TLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEF 461
Query: 437 TFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQ 496
S+L C L +G ++ ++ I A S ++ ++++ G +E A +
Sbjct: 462 ALSSVLSVCGSMALLEQGKQVHAHVLC-IGIDHEAMVHSALISMYSKCGSVEEASKIFNG 520
Query: 497 MNIKPTASLWSAILGACSIYGNTSLGELAARNLFD------MEPEKSVNYVVLSNIYTA 549
M I S W+A++ + +G + A NLF+ ++P+ YV + TA
Sbjct: 521 MKINNIIS-WTAMINGYAEHGYSQ----EAINLFEKISSVGLKPD----YVTFIGVLTA 570
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/514 (25%), Positives = 235/514 (45%), Gaps = 67/514 (13%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ L+ D IH I G++ + + + Y K G + F
Sbjct: 257 DSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLF 316
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
++M +VVSWT +I+ Y Q G +E+A+ F M +S V N++T+++ + ACA + +
Sbjct: 317 EKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAK 376
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G I G + + V+ L V ++++ LY+K G ++ A ++F I RKD++SW+ +I +
Sbjct: 377 WGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYS 436
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G+ ++F M R+G KP+ F L S+L L + Q+H ++ +G++
Sbjct: 437 QGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAM 496
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +LI +Y+K GS+ A +++ M +IIS TA+I+G+A + +S+EA +LF+ +
Sbjct: 497 VHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYA-EHGYSQEAINLFEKISSV 555
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAF---KYQSSYDAAVGNALIDMYAKSGEI 385
+ D V +L C++ ++LG + F +YQ S +ID+ ++G +
Sbjct: 556 GLKPDYVTFIGVLTACSHAGMVDLG--FYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRL 613
Query: 386 ADANRAFDEM-------------------GDKNVISWT----------------SLIAGY 410
++A M GD + WT +L Y
Sbjct: 614 SEAEHMIRSMPCYTDDVVWSTLLRSCRVHGDVDRGRWTAEQLLRLDPNSAGTHIALANIY 673
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWEL--FTDMINKY--- 465
A G EA + K MK +G++ GW D +N +
Sbjct: 674 AAKGRWKEAAHIRKLMKSKGVIKE------------------RGWSWVNVNDKLNAFVAG 715
Query: 466 -RILPRAEHFSCVVDLFARRGQLESAYNMIRQMN 498
+ P++EH + V++L + + A IR +N
Sbjct: 716 DQAHPQSEHITTVLELLS--ANIGDARQEIRSLN 747
>gi|357512007|ref|XP_003626292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355501307|gb|AES82510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 650
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 201/576 (34%), Positives = 313/576 (54%), Gaps = 16/576 (2%)
Query: 22 SCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIIT-------NGYESN-LHLSTKVII 73
S +LL+ + SLL C + IHA II +G + N L + ++
Sbjct: 26 STTKSLLNHADLTSLLTLCGRDRNLTLGSSIHARIIKQPPSFDFDGSQRNALFIWNSLLS 85
Query: 74 FYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG---VRAN 130
Y+K G+ +A FD MP R+ VSW MISG+ +NG + + F M S R +
Sbjct: 86 MYSKCGEFRNAGNVFDYMPVRDTVSWNTMISGFLRNGDFDTSFKFFKQMTESNRVCCRFD 145
Query: 131 QFTYSSALRACARMRW---LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWI 187
+ T ++ L C +R +MI G + G F + V +AL+ Y KC
Sbjct: 146 KATLTTMLSGCDGLRLGISTSVTQMIHGLVFVGGFEREITVGNALITSYFKCECFSQGRK 205
Query: 188 LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG-MKPDCFTLGSILRASVGGI 246
+F+ + ++VV+W A+I GLA F +DS LF M G + P+ T S L A G
Sbjct: 206 VFDEMIERNVVTWTAVISGLAQNEFYEDSLRLFAQMRCCGSVSPNVLTYLSSLMACSGLQ 265
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
L +IH L+ KLG++S + +L+D+Y+K GS+ +A+Q++ S + D +S T ++
Sbjct: 266 VLRDGQKIHGLLWKLGMQSDLCIESALMDLYSKCGSLDAAWQIFESAEELDGVSLTVILV 325
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
FA++ +EA +F M+ M +D ++ +L + L LG+QIH+ K
Sbjct: 326 AFAQN-GFEEEAIQIFTKMVALGMEVDANMVSAVLGVFGVGTYLALGKQIHSLIIKKNFC 384
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
+ VGN L++MY+K G+++D+ F +M KN +SW S+IA +A+HG G +A++ Y++M
Sbjct: 385 ENPFVGNGLVNMYSKCGDLSDSLLVFYQMTQKNSVSWNSVIAAFARHGDGFKALQFYEEM 444
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
+ EG+ P DVTFLSLL ACSH GL +G EL M N + I PR+EH++CVVD+ R G
Sbjct: 445 RVEGVAPTDVTFLSLLHACSHAGLVEKGMELLESMTNDHGISPRSEHYACVVDMLGRAGH 504
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
L A I + +W A+LGACSI+G++ +G+ AA LF P YV+++NI
Sbjct: 505 LNEAKKFIEGLPEHGGVLVWQALLGACSIHGDSEMGKYAADRLFSAAPASPAPYVLMANI 564
Query: 547 YTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
Y++ G W + K M+E + K G S+++ KK
Sbjct: 565 YSSEGNWKERASSIKRMKEMGVAKEVGISWIEIEKK 600
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 177/529 (33%), Positives = 298/529 (56%), Gaps = 6/529 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IHA + G+ES++ +S + Y K V + + F M N+ S ++SG+
Sbjct: 112 IHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTET 171
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ + +L G N +T+ S L+ CA L G+ I G + K + + ++
Sbjct: 172 CDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNS 231
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+++YAKCG A +F I +DVVSW A+I G +G+ +F M+ +G P+
Sbjct: 232 LVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGS-GLRIFNQMLAEGFNPN 290
Query: 232 CFTLGSILRA--SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
+T SILR+ S+ ++L K Q+H I+K L+ ++ + +L+D+YAK + A +
Sbjct: 291 MYTFISILRSCSSLSDVDLGK--QVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETI 348
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ ++K D+ + T +++G+A+D ++A F M + + ++ L L+ C+ +A+
Sbjct: 349 FNRLIKRDLFAWTVIVAGYAQD-GQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIAT 407
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
L+ GRQ+H+ A K S D V +AL+DMYAK G + DA FD + ++ +SW ++I G
Sbjct: 408 LDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICG 467
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
Y++HG G +A++ ++ M EG VP++VTF+ +L ACSH GL EG + F + Y I P
Sbjct: 468 YSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITP 527
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
EH++C+VD+ R G+ + I +M + +W +LGAC ++GN GE AA L
Sbjct: 528 TIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKL 587
Query: 530 FDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
F++EPE NY++LSN++ A G WD+ R LM R ++K PG S+++
Sbjct: 588 FELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVE 636
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 129/465 (27%), Positives = 239/465 (51%), Gaps = 10/465 (2%)
Query: 56 IITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYD-EN 114
+I NG + HL + ++ Y K + AR+ + MP ++V W +S A + Y +
Sbjct: 15 VIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSS-ANSPYPLQE 73
Query: 115 ALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLD 174
A+ +F M + +R NQF ++S + A A + G I + K F ++ + +A +
Sbjct: 74 AVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVT 133
Query: 175 LYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFT 234
+Y K +E+ W F+ + +++ S N ++ G D + ++ +G +P+ +T
Sbjct: 134 MYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYT 193
Query: 235 LGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML 294
SIL+ +L + IH +IK G+ + L SL++VYAK GS A +++ +
Sbjct: 194 FISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 253
Query: 295 KTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGR 354
+ D++S TALI+GF + S +F M+ + + +L C++++ ++LG+
Sbjct: 254 ERDVVSWTALITGFVAEGYGS--GLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGK 311
Query: 355 QIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG 414
Q+HA K + VG AL+DMYAK+ + DA F+ + +++ +WT ++AGYA+ G
Sbjct: 312 QVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDG 371
Query: 415 YGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF 474
G +A++ + +M+ EG+ PN+ T S L CS G +L + I + + F
Sbjct: 372 QGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQ---SGDMF 428
Query: 475 --SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
S +VD++A+ G +E A + + + T S W+ I+ S +G
Sbjct: 429 VASALVDMYAKCGCVEDAEVVFDGLVSRDTVS-WNTIICGYSQHG 472
>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 181/551 (32%), Positives = 307/551 (55%), Gaps = 4/551 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D + +L+ C + + + +H I+ G + + T ++ YAK G++ +R F
Sbjct: 102 DNVVFSHVLKACSESRNFDEGRKVHCQIVKFGNPDSF-VFTGLVDMYAKCGEIECSRSVF 160
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D +RNV SW++MI+GY QN ++ L++F+ M + ANQ T + AC ++ L
Sbjct: 161 DENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEANQITLGILVHACKKLGALH 220
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ + G + K ++ +ALLDLYAKCG + DA +F+ + D+VSW AMI G
Sbjct: 221 QGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFDELHGIDIVSWTAMIVGYT 280
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G +++ LF + + P+ T+ S+ + + L IH L IKLG
Sbjct: 281 QNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLNLGRSIHGLSIKLG-SRDPI 339
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+T SL+D YAK R A ++ ++ D+++ ++IS F+++ + + EA +LF M +
Sbjct: 340 VTNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISAFSQNGS-AYEALELFHQMRMG 398
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS-SYDAAVGNALIDMYAKSGEIAD 387
+ D V L +L+ CA++ +L +G HA+A K S + VG AL+ YAK G+
Sbjct: 399 SVLPDAVTLVSVLSACASLNALQVGSSFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAES 458
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A FD M K+ ++W+++I+GY G G ++ ++ M + PN+ F S+L ACSH
Sbjct: 459 ARVIFDGMDQKSTVTWSAMISGYGIQGNGRGSLSIFGDMLKAELKPNEEIFTSILSACSH 518
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
TG+ EGW LFT + Y ++P +H++C+VDL AR G+L+ A + I++M ++P SL+
Sbjct: 519 TGMIGEGWRLFTMICQDYNLVPSTKHYTCMVDLLARAGRLKEALDFIQKMPVQPDVSLFG 578
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
A L C ++ LGELA + + ++ P + YV++ N+Y + W ++ R+LM++R
Sbjct: 579 AFLHGCGLHSRFDLGELAIKRMLELHPGDACYYVLMCNLYASDARWSKVKQVRELMKQRG 638
Query: 568 LRKNPGYSFLQ 578
L K PG S ++
Sbjct: 639 LMKTPGCSLME 649
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 137/467 (29%), Positives = 241/467 (51%), Gaps = 4/467 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HA+++ G +L STK++ Y G + AR FD +P + +SW +I Y N
Sbjct: 24 MHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNSE 83
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ + ++ M + +S L+AC+ R GR + I K ++ FV +
Sbjct: 84 FRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFGNPDS-FVFTG 142
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+D+YAKCG IE + +F+ ++V SW++MI G D LF M + ++ +
Sbjct: 143 LVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEAN 202
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
TLG ++ A L + +H +IK G+E + L +L+D+YAK G +R A ++
Sbjct: 203 QITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFD 262
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
+ DI+S TA+I G+ + + +EA LF + +DV + + + C+ + +LN
Sbjct: 263 ELHGIDIVSWTAMIVGYTQ-NGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLN 321
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
LGR IH + K S D V N+L+D YAK DA F+ + D++V++W S+I+ ++
Sbjct: 322 LGRSIHGLSIKL-GSRDPIVTNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISAFS 380
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
++G +EA+EL+ +M+ ++P+ VT +S+L AC+ G + + +
Sbjct: 381 QNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACASLNALQVGSSFHAYAVKRGLLSSNV 440
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
+ ++ +A+ G ESA + M+ K T + WSA++ I GN
Sbjct: 441 YVGTALLTFYAKCGDAESARVIFDGMDQKSTVT-WSAMISGYGIQGN 486
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 85/183 (46%), Gaps = 6/183 (3%)
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
M + ++ ++C N+ +L ++HA+ + D + L+ +Y G + A
Sbjct: 1 MPLPPILHNFFYSLCDNINTL---MEMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLAR 57
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
FD + + +SW +I Y + + + Y +M+ ++V F +L ACS +
Sbjct: 58 LVFDTIPHPDFLSWKVIIRWYFLNSEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESR 117
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
EG ++ ++ P + F+ +VD++A+ G++E + ++ + N+ WS++
Sbjct: 118 NFDEGRKVHCQIVKFGN--PDSFVFTGLVDMYAKCGEIECSRSVFDE-NLDRNVFSWSSM 174
Query: 510 LGA 512
+
Sbjct: 175 IAG 177
>gi|222630191|gb|EEE62323.1| hypothetical protein OsJ_17112 [Oryza sativa Japonica Group]
Length = 591
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 200/570 (35%), Positives = 306/570 (53%), Gaps = 19/570 (3%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLS-----------TKVIIFY 75
LL+ + + LL C + R +HA ++ N L S ++ Y
Sbjct: 8 LLNYARFSGLLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNSLVSMY 67
Query: 76 AKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA-NQFTY 134
A+ G A + FD M R+ VSW ++I+ G +AL +F MLRS RA ++ T+
Sbjct: 68 ARCGRREDAARVFDEMRVRDAVSWNSLIAASRGAG---DALALFRRMLRSDARACDRATF 124
Query: 135 SSALRACARM--RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI 192
++ L CAR L M+ G + F + V +AL+ Y +CG A +F +
Sbjct: 125 TTVLSECARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGM 184
Query: 193 ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS 252
K+V++W AMI G+A +SF LF M+R + + T L A + +
Sbjct: 185 AEKNVITWTAMISGMARAELYKESFSLFGQMIRT-VDANNATYSCALLACARSLAAREGQ 243
Query: 253 QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDD 312
Q+H L++K G E + L+DVY+K G + A ++RS + D + T ++ GFA++
Sbjct: 244 QVHGLVVKAGFEDDLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQNG 303
Query: 313 NHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG 372
K AF+LF +M+ ID+ + +L A LG+QIHA K + V
Sbjct: 304 LEEK-AFELFAEMVGAGNEIDENTVSAVLGAFGASAPFALGKQIHALVIKRCFGVNTYVC 362
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
N L++MY+K GE+ ++ R FDEM KN +SW S+IA +A+HG+G E +L++ MK +G
Sbjct: 363 NGLVNMYSKCGELRESVRVFDEMPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAK 422
Query: 433 PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYN 492
P DVTFLSLL ACSH G +G E+ M ++Y +LPR EH++CVVD+ R G L+ A +
Sbjct: 423 PTDVTFLSLLHACSHVGSAKKGLEILNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDAKS 482
Query: 493 MIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGA 552
I A LW A++GACS +GN+ +G+ AA L ++P + YV+LSNIY++ G
Sbjct: 483 FIEDGPFTDNALLWQALMGACSFHGNSEVGKYAAEKLLLLDPSCTAAYVLLSNIYSSEGR 542
Query: 553 WDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
WD+ K K M E LRK+ G S+++ K+
Sbjct: 543 WDDRAKVMKRMSEMGLRKDTGKSWIELEKE 572
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 182/532 (34%), Positives = 301/532 (56%), Gaps = 2/532 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IH + +S++ ++T +++ YAK G+ A++ F + R++V+W+A+I+ Q GY
Sbjct: 351 IHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGY 410
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
E AL +F M ++ N+ T S L ACA + L+ G+ I K +L +A
Sbjct: 411 PEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTA 470
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+ +YAKCG+ A F R+ +D+V+WN++I G A G ++ +F + + PD
Sbjct: 471 LVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPD 530
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY- 290
T+ ++ A +L + + IH LI+KLG ES + +LID+YAK GS+ SA L+
Sbjct: 531 AGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFN 590
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
++ D ++ +I+ + ++ H+KEA F M L+ + V +L A +A+
Sbjct: 591 KTDFTKDEVTWNVIIAAYMQN-GHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAF 649
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
G HA + + VGN+LIDMYAK G++ + + F+EM K+ +SW ++++GY
Sbjct: 650 REGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGY 709
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
A HG+G AI L+ M+ + + V+F+S+L AC H GL EG ++F M +KY I P
Sbjct: 710 AVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPD 769
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
EH++C+VDL R G + I+ M ++P A +W A+LG+C ++ N LGE+A +L
Sbjct: 770 LEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLV 829
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+EP ++VVLS+IY +G W +A K R M + L+K PG S+++ K
Sbjct: 830 KLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNK 881
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 164/522 (31%), Positives = 271/522 (51%), Gaps = 17/522 (3%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IH ++ + S + S +I Y+K GDV AR+ FD+M +++ VSW M++GYA NG
Sbjct: 252 IHGYVFRRDFSSAV--SNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGC 309
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
L +F M VR N+ + SA A A L+ G+ I G + R ++ V +
Sbjct: 310 FVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATP 369
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+ +YAKCG E A LF ++ +D+V+W+A+I L G+ +++ LF+ M Q MKP+
Sbjct: 370 LMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPN 429
Query: 232 CFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
TL SIL A + L+K+ + IH +K ++S +L+ +YAK G +A +
Sbjct: 430 RVTLMSILPA-CADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTF 488
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
M DI++ +LI+G+A+ + A D+F + L + D + ++ CA + L
Sbjct: 489 NRMSSRDIVTWNSLINGYAQIGD-PYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDL 547
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAG 409
+ G IH K D V NALIDMYAK G + A F++ K+ ++W +IA
Sbjct: 548 DQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAA 607
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
Y ++G+ EAI + +M+ E PN VTF+S+L A ++ EG F I + L
Sbjct: 608 YMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMA-FHACIIQMGFLS 666
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
+ ++D++A+ GQL + + +M+ K T S W+A+L +++G+ G+ A L
Sbjct: 667 NTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVS-WNAMLSGYAVHGH---GDRAIA-L 721
Query: 530 FDMEPEK-----SVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
F + E SV++V + + G + RK M ++
Sbjct: 722 FSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDK 763
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 213/401 (53%), Gaps = 8/401 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IHA II +G++ + H T +I Y+ AR FD P + + W +MI Y ++
Sbjct: 51 IHAQIIVSGFKHH-HSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQ 109
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
AL ++ M+ G+ +++T++ L+AC LQ G G I + ++F+ +
Sbjct: 110 YNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAG 169
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+D+Y+K G ++ A +F+++ ++DVV+WNAMI GL+ ++ FRSM G++P
Sbjct: 170 LVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPS 229
Query: 232 CFTLGSILRA--SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
+L ++ + IEL + IH + + S+ ++ LID+Y+K G + A ++
Sbjct: 230 SVSLLNLFPGICKLSNIELCR--SIHGYVFRRDFSSA--VSNGLIDLYSKCGDVDVARRV 285
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ M+ D +S +++G+A + E +LF M L + I+ V A
Sbjct: 286 FDQMVDQDDVSWGTMMAGYAHNGCFV-EVLELFDKMKLGNVRINKVSAVSAFLAAAETID 344
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
L G++IH A + + D V L+ MYAK GE A + F + +++++W+++IA
Sbjct: 345 LEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAA 404
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
+ GY EA+ L+++M+++ M PN VT +S+L AC+ L
Sbjct: 405 LVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSL 445
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 189/385 (49%), Gaps = 5/385 (1%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNG 60
I+ A +TG ++AL + + P+ T MS+L C D + IH +
Sbjct: 401 IIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKAD 460
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+S+L T ++ YAK G +A F+RM R++V+W ++I+GYAQ G NA+ +F
Sbjct: 461 MDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFY 520
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
+ S + + T + ACA + L G I G I K F + VK+AL+D+YAKCG
Sbjct: 521 KLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCG 580
Query: 181 WIEDAWILFERIE-RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
+ A LF + + KD V+WN +I G ++ F M + P+ T S+L
Sbjct: 581 SLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVL 640
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
A+ + H II++G S+ + SLID+YAK G + + +L+ M D +
Sbjct: 641 PAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTV 700
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI-HA 358
S A++SG+A H A LF M ++ ID V +L+ C + + GR+I H+
Sbjct: 701 SWNAMLSGYAV-HGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHS 759
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSG 383
+ KY D ++D+ ++G
Sbjct: 760 MSDKYHIKPDLEHYACMVDLLGRAG 784
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 181/507 (35%), Positives = 292/507 (57%), Gaps = 14/507 (2%)
Query: 85 RKAFDRMPER-NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
R F + ++ +V SW ++I+ +A++G AL FS+M + + N+ T+ +++C+
Sbjct: 39 RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
+ L G+ I + ++FV SAL+D+Y+KCG++ DA LF+ I ++VVSW +M
Sbjct: 99 LYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSM 158
Query: 204 IGGLAMQGFNDDSFWLFRSMM-----------RQGMKPDCFTLGSILRASVGGIELMKIS 252
I G ++ +LF+ + G+ D LG ++ A
Sbjct: 159 ISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTE 218
Query: 253 QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDD 312
+H L +K G E + +L+D YAK G I + +++ M +TD+ S +LI+ +A++
Sbjct: 219 CVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQN- 277
Query: 313 NHSKEAFDLFKDMILK-KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAV 371
S EAF LF DM+ + ++ + V L +L CA+ +L +G+ IH K + + V
Sbjct: 278 GLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVV 337
Query: 372 GNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGM 431
G +++DMY K G + A +AFD + KNV SWT ++AGY HG+G EA++++ +M G+
Sbjct: 338 GTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGI 397
Query: 432 VPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAY 491
PN +TF+S+L ACSH GL EGW F M ++ + P EH+SC+VDL R G L+ AY
Sbjct: 398 KPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAY 457
Query: 492 NMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAG 551
+I++M +KP +W ++LGAC I+ N LGE++AR LF ++P YV+LSNIY AG
Sbjct: 458 GLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAG 517
Query: 552 AWDNARKTRKLMEERSLRKNPGYSFLQ 578
WD+ + R LM+ L K PGYS ++
Sbjct: 518 RWDDVERMRILMKNHGLLKTPGYSIVE 544
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/440 (29%), Positives = 213/440 (48%), Gaps = 40/440 (9%)
Query: 2 NIVRANF-KTGQLKQAL-------KFSLSCPDTLLDPSTYMS---LLQFCIDKKAERQAH 50
N + A+F ++G QAL K SL P+ P T S L C K+ +QA
Sbjct: 55 NSIIADFARSGDSLQALYAFSSMRKLSLH-PNRSTFPCTIKSCSSLYDLCAGKQIHQQAF 113
Query: 51 LIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
+ GY S++ +++ +I Y+K G + ARK FD +PERNVVSWT+MISGY QN
Sbjct: 114 VF-------GYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNE 166
Query: 111 YDENALLVFSAML-----------RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQK 159
A+ +F L GV + + ACAR+ + G K
Sbjct: 167 RAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVK 226
Query: 160 GRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWL 219
F L V + L+D YAKCG I + +F+ +E DV SWN++I A G + ++F L
Sbjct: 227 KGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSL 286
Query: 220 FRSMMRQG-MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYA 278
F M+++G ++ + TL ++L A L IHD ++K+ LE + + S++D+Y
Sbjct: 287 FSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYC 346
Query: 279 KYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILC 338
K G + A + + + + ++ S T +++G+ H KEA +F +MI + + +
Sbjct: 347 KCGRVEMARKAFDRLKRKNVKSWTVMVAGYGM-HGHGKEAMKVFYEMIRCGIKPNYITFV 405
Query: 339 LMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG----NALIDMYAKSGEIADANRAFDE 394
+L C++ L G H F K + +D G + ++D+ ++G + +A E
Sbjct: 406 SVLAACSHAGLLKEGW--HWFN-KMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQE 462
Query: 395 MGDK-NVISWTSLIAGYAKH 413
M K + I W SL+ H
Sbjct: 463 MKVKPDFIVWGSLLGACRIH 482
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 191/571 (33%), Positives = 299/571 (52%), Gaps = 38/571 (6%)
Query: 15 QALKFSLSCPDTLLD---PSTYMSLLQFCIDKKAE-RQAHLIHAHIITNGYESNLHLSTK 70
Q+ K S S P LD P + LL +D + R +H+ II N L K
Sbjct: 20 QSRKVSSSLPKLELDQKSPQETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVK 79
Query: 71 VIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
++ YA + DV SARK FD +PERNV+ MI Y NG+ + VF M VR +
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE 190
+T+ L+AC+ + GR I GS K LFV + L+ +Y KCG++ +A ++ +
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 191 RIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMK 250
+ R+DVVSWN+++ G A DD+ + R M + D T+ S+L A V
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA-VSNTTTEN 258
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR 310
+ + D+ K+G K ++S +I G
Sbjct: 259 VMYVKDMFFKMG--------------------------------KKSLVSWNVMI-GVYM 285
Query: 311 DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA 370
+ EA +L+ M D V + +L C + ++L+LG++IH + + + +
Sbjct: 286 KNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL 345
Query: 371 VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG 430
+ NALIDMYAK G + A F+ M ++V+SWT++I+ Y G G +A+ L+ K++ G
Sbjct: 346 LENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSG 405
Query: 431 MVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA 490
+VP+ + F++ L ACSH GL EG F M + Y+I PR EH +C+VDL R G+++ A
Sbjct: 406 LVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEA 465
Query: 491 YNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAA 550
Y I+ M+++P +W A+LGAC ++ +T +G LAA LF + PE+S YV+LSNIY A
Sbjct: 466 YRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKA 525
Query: 551 GAWDNARKTRKLMEERSLRKNPGYSFLQSSK 581
G W+ R +M+ + L+KNPG S ++ ++
Sbjct: 526 GRWEEVTNIRNIMKSKGLKKNPGASNVEVNR 556
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 197/563 (34%), Positives = 309/563 (54%), Gaps = 12/563 (2%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
D LD T+ + L C R LIHA I +G + L+ +I Y K G + A
Sbjct: 115 DLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWA 174
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR- 143
R F+ E + VSW ++I+GY + G ++ L + MLR G+ N + SAL+AC
Sbjct: 175 RLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSN 234
Query: 144 -MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
++ G+M+ G K ++ V +ALLD YAK G +EDA +F+ + +VV +NA
Sbjct: 235 FSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNA 294
Query: 203 MIGG-LAMQG----FNDDSFWLFRSMMRQGMKPDCFTLGSILRA--SVGGIELMKISQIH 255
MI G L M+ F +++ +LF M +GMKP FT SIL+A ++ E K QIH
Sbjct: 295 MIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGK--QIH 352
Query: 256 DLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHS 315
I K L+S + +L+++Y+ GSI + + S K D++S T+LI G ++
Sbjct: 353 AQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQN-GQF 411
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNAL 375
+ LF +++ D+ + +ML+ CAN+A++ G QIHA+A K + N+
Sbjct: 412 EGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQ 471
Query: 376 IDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND 435
I MYAK G+I AN F E + +++SW+ +I+ A+HG EA++L++ MK G+ PN
Sbjct: 472 ICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNH 531
Query: 436 VTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIR 495
+TFL +L ACSH GL EG F M + I P +H +C+VDL R G+L A + I
Sbjct: 532 ITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIM 591
Query: 496 QMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDN 555
+ +W ++L AC ++ T G+ A + ++EPE + +YV+L NIY AG
Sbjct: 592 DSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMP 651
Query: 556 ARKTRKLMEERSLRKNPGYSFLQ 578
A + R LM++R ++K PG S+++
Sbjct: 652 ATEIRNLMKDRGVKKEPGLSWIE 674
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 157/502 (31%), Positives = 261/502 (51%), Gaps = 20/502 (3%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD TY L+Q + L H H+I ++ L L ++ Y K G+ A+K
Sbjct: 17 LDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKL 76
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FDRMP+RNVVSW ++ISGY Q G+ + +F S +R ++FT+S+AL C R L
Sbjct: 77 FDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDL 136
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ GR+I I + + ++L+D+Y KCG I+ A ++FE + D VSWN++I G
Sbjct: 137 RLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGY 196
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS----VGGIELMKISQIHDLIIKLGL 263
G ND+ L M+R G+ + + LGS L+A IE K+ +H +KLGL
Sbjct: 197 VRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKM--LHGCAVKLGL 254
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR----DDNHSKEAF 319
+ + +L+D YAK G + A ++++ M +++ A+I+GF + D + EA
Sbjct: 255 DLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAM 314
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMY 379
LF +M + M + +L C+ + + G+QIHA FKY D +GNAL+++Y
Sbjct: 315 YLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELY 374
Query: 380 AKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFL 439
+ SG I D + F +V+SWTSLI G+ ++G + L+ ++ G P++ T
Sbjct: 375 SLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTIS 434
Query: 440 SLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV----VDLFARRGQLESAYNMIR 495
+L AC++ G + I+ Y I +F+ + + ++A+ G ++SA NM
Sbjct: 435 IMLSACANLAAVKSG-----EQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSA-NMTF 488
Query: 496 QMNIKPTASLWSAILGACSIYG 517
+ P WS ++ + + +G
Sbjct: 489 KETKNPDIVSWSVMISSNAQHG 510
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 197/398 (49%), Gaps = 19/398 (4%)
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
G+ + TY+ ++ R L G++ + K F LF+ + LL +Y KCG + A
Sbjct: 14 GLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVA 73
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGG 245
LF+R+ +++VVSWN++I G GF + LF+ ++ D FT + L
Sbjct: 74 KKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRT 133
Query: 246 IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALI 305
++L IH LI GL LT SLID+Y K G I A ++ S + D +S +LI
Sbjct: 134 LDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLI 193
Query: 306 SGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICAN--VASLNLGRQIHAFAFKY 363
+G+ R ++ E L M+ + ++ L L C + +S+ G+ +H A K
Sbjct: 194 AGYVRIGSND-EMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKL 252
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAK-----HGYGHE 418
D VG AL+D YAK G++ DA + F M D NV+ + ++IAG+ + + +E
Sbjct: 253 GLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANE 312
Query: 419 AIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM---INKYRILPRAEHF- 474
A+ L+ +M+ GM P++ TF S+L ACS T E +E + I KY + +++ F
Sbjct: 313 AMYLFFEMQSRGMKPSEFTFSSILKACS----TIEAFECGKQIHAQIFKYNL--QSDEFI 366
Query: 475 -SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
+ +V+L++ G +E S S I+G
Sbjct: 367 GNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVG 404
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 187/578 (32%), Positives = 319/578 (55%), Gaps = 32/578 (5%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP-E 93
+LLQ K++ QA +HA I+ S LST ++ Y+ + + + F+ +P
Sbjct: 10 TLLQNPSSVKSKSQAKQLHAQILRTSLPSPSLLST-ILSIYSNLNLLHDSLLIFNSLPSP 68
Query: 94 RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMI 153
++W ++I Y +G ++L F ML SG + + S L++C M+ L+ G +
Sbjct: 69 PTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESV 128
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWI-------------------------- 187
G I + +L+ +AL+++Y+K +E+
Sbjct: 129 HGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGS 188
Query: 188 ---LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG 244
+FE + ++D+VSWN +I G A G ++D+ + R M ++PD FTL S+L
Sbjct: 189 LRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAE 248
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
+ L+K +IH I+ G ++ + SLID+YAK + + +++ + + D IS ++
Sbjct: 249 YVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSI 308
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
I+G ++ E F+ M++ K+ + V ++ CA++ +L+LG+Q+H + + +
Sbjct: 309 IAGCVQNGMFD-EGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSR 367
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
+ + +AL+DMYAK G I A FD+M +++SWT++I GYA HG+ ++AI L+K
Sbjct: 368 FDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFK 427
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
+M+ EG+ PN V F+++L ACSH GL E W+ F M YRI+P EH++ V DL R
Sbjct: 428 RMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRV 487
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLS 544
G+LE AY I M+I+PT S+WS +L AC ++ N L E ++ LF ++P+ YV+LS
Sbjct: 488 GRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLS 547
Query: 545 NIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
NIY+AAG W +ARK R M ++ ++K P S+++ K
Sbjct: 548 NIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNK 585
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 208/429 (48%), Gaps = 36/429 (8%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYA------------ 76
D + + S+L+ C K R +H II G +L+ ++ Y+
Sbjct: 105 DHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYK 164
Query: 77 ------KVGDVLSA-----------RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
K DV S RK F+ MP+R++VSW +ISG AQNG E+AL++
Sbjct: 165 KVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMV 224
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
M + +R + FT SS L A L G+ I G + + ++F+ S+L+D+YAKC
Sbjct: 225 REMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKC 284
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
++D+ +F + + D +SWN++I G G D+ F+ M+ +KP+ + SI+
Sbjct: 285 TRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIM 344
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
A L Q+H II+ + + + +L+D+YAK G+IR+A ++ M D++
Sbjct: 345 PACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMV 404
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG-RQIHA 358
S TA+I G+A H+ +A LFK M ++ + + V +L C++ ++ + ++
Sbjct: 405 SWTAMIMGYAL-HGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNS 463
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVIS-WTSLIAGYAKHGYGH 417
Y+ A+ D+ + G + +A +M + S W++L+A H
Sbjct: 464 MTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRV----H 519
Query: 418 EAIELYKKM 426
+ IEL +K+
Sbjct: 520 KNIELAEKV 528
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 96/188 (51%), Gaps = 3/188 (1%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITN 59
+I+ + G + LKF + P+ ++ S++ C +H +II +
Sbjct: 307 SIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRS 366
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
++ N+ +++ ++ YAK G++ +AR FD+M ++VSWTAMI GYA +G+ +A+ +F
Sbjct: 367 RFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLF 426
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWL-QGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
M GV+ N + + L AC+ + + + Q R + L +A+ DL +
Sbjct: 427 KRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGR 486
Query: 179 CGWIEDAW 186
G +E+A+
Sbjct: 487 VGRLEEAY 494
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 185/534 (34%), Positives = 301/534 (56%), Gaps = 5/534 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IHAHI+ G+E + L +I Y K G V +A K FD MP +N++SWT ++SGY QN
Sbjct: 271 IHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSL 330
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ A+ +F++M + G++ + F SS L +CA + L+ G + K + +V ++
Sbjct: 331 HKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNS 390
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN---DDSFWLFRSMMRQGM 228
L+D+YAKC + +A +F+ DVV +NAMI G + G D+ +F M + +
Sbjct: 391 LIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLI 450
Query: 229 KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQ 288
+P T S+LRAS L QIH L+ K GL +LI VY+ ++ +
Sbjct: 451 RPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRL 510
Query: 289 LYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
++ M D++ ++ SG+ + + ++EA +LF ++ L + D+ M+ N+A
Sbjct: 511 VFDEMKVKDLVIWNSMFSGYVQQ-SENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLA 569
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA 408
SL LG++ H K + + NAL+DMYAK G DA++AFD ++V+ W S+I+
Sbjct: 570 SLQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVIS 629
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
YA HG G +A+++ +KM EG+ PN +TF+ +L ACSH GL +G + F M+ ++ I
Sbjct: 630 SYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIE 688
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARN 528
P EH+ C+V L R G+L A +I +M KP A +W ++L C+ GN L E AA
Sbjct: 689 PETEHYVCMVSLLGRAGRLNEARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEYAAEM 748
Query: 529 LFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+P+ S ++ +LSNIY + G W +A+K R+ M+ + K PG S+++ +K+
Sbjct: 749 AILSDPKDSGSFTLLSNIYASKGMWTDAKKVRERMKFEGVVKEPGRSWIEINKE 802
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/405 (33%), Positives = 229/405 (56%), Gaps = 15/405 (3%)
Query: 50 HLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQN 109
+++H II +G E + +LS ++ Y++ G ++ ARK F++MPERN+V+W+ M+S +
Sbjct: 64 NVVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHH 123
Query: 110 GYDENALLVFSAMLRSGVRA-NQFTYSSALRACARM----RWLQGGRMIQGSIQKGRFVE 164
G+ E +L+VF R+ + N++ SS ++AC+ + RW+ +Q + K RF
Sbjct: 124 GFYEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMV--FQLQSFLVKSRFDR 181
Query: 165 NLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMM 224
+++V + L+D Y K G I+ A ++F+ + K V+W MI G G + S LF +M
Sbjct: 182 DVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLM 241
Query: 225 RQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIR 284
+ PD + L ++L A L QIH I++ G E L LID Y K G +R
Sbjct: 242 EGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVR 301
Query: 285 SAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI-DDVILC-LMLN 342
+A++L+ M +IIS T L+SG+ ++ H KEA +LF M K G+ D+ C +L
Sbjct: 302 AAHKLFDGMPNKNIISWTTLLSGYKQNSLH-KEAMELFTSM--PKFGLKPDMFACSSILT 358
Query: 343 ICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVIS 402
CA++ +L G Q+HA+ K D+ V N+LIDMYAK + +A + FD +V+
Sbjct: 359 SCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVL 418
Query: 403 WTSLIAGYAKHGYG---HEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ ++I GY++ G H+A+ ++ M+ + P+ +TF+SLL A
Sbjct: 419 FNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRA 463
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 157/581 (27%), Positives = 281/581 (48%), Gaps = 48/581 (8%)
Query: 30 PSTYM--SLLQFC--IDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
P+ Y+ S +Q C +D + + ++ + ++ ++++ T +I FY K G++ AR
Sbjct: 144 PNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYAR 203
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
FD +PE++ V+WT MISG + G +L +F ++ V + + S+ L AC+ +
Sbjct: 204 LVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILP 263
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
+L+GG+ I I + ++ + + L+D Y KCG + A LF+ + K+++SW ++
Sbjct: 264 FLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLS 323
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
G + ++ LF SM + G+KPD F SIL + L +Q+H IK L +
Sbjct: 324 GYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGN 383
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSK--EAFDLFK 323
+ +T SLID+YAK + A +++ D++ A+I G++R + +A ++F
Sbjct: 384 DSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFH 443
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
DM + + + +L A++ SL L +QIH FK+ + D G+ALI +Y+
Sbjct: 444 DMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCY 503
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL- 442
+ D+ FDEM K+++ W S+ +GY + EA+ L+ +++ P++ TF+ ++
Sbjct: 504 CLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVT 563
Query: 443 -------------FACS--HTGLTCEGW--ELFTDMINKYRILPRAEH------------ 473
F C GL C + DM K P H
Sbjct: 564 AAGNLASLQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGS-PEDAHKAFDSAASRDVV 622
Query: 474 -FSCVVDLFARRGQLESAYNMIRQM---NIKPTASLWSAILGACSIYGNTSLG----ELA 525
++ V+ +A G+ A M+ +M I+P + +L ACS G G EL
Sbjct: 623 CWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELM 682
Query: 526 ARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
R F +EPE +YV + ++ AG + AR+ + M +
Sbjct: 683 LR--FGIEPETE-HYVCMVSLLGRAGRLNEARELIEKMPTK 720
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 193/570 (33%), Positives = 310/570 (54%), Gaps = 4/570 (0%)
Query: 12 QLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLST 69
Q K+A + + +P T+++LL C + Q + II GY+S L +
Sbjct: 129 QFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGN 188
Query: 70 KVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA 129
++ Y K + A + F MPE + VS+ AMI+GY+++G DE A+ +F M SG++
Sbjct: 189 TLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKP 248
Query: 130 NQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILF 189
+FT+++ L A + + G+ I + K FV N+FV +ALLD Y+K + DA LF
Sbjct: 249 TEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLF 308
Query: 190 ERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELM 249
+ + +D VS+N +I G A G + +F LFR + F ++L + ++
Sbjct: 309 DEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWE 368
Query: 250 KISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFA 309
QIH I +S + SL+D+YAK G A ++ ++ + TA+IS +
Sbjct: 369 MGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYV 428
Query: 310 RDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDA 369
+ + +E LF M + D +L A++ASL+LG+Q+H+F K +
Sbjct: 429 QKGFY-EEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNV 487
Query: 370 AVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE 429
G+AL+D+YAK G I DA + F EM D+N++SW ++I+ YA++G ++ +K+M
Sbjct: 488 FSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLS 547
Query: 430 GMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLES 489
G+ P+ V+FL +L ACSH+GL EG F M Y++ PR EH++ VVD+ R G+
Sbjct: 548 GLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNE 607
Query: 490 AYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEP-EKSVNYVVLSNIYT 548
A ++ +M I P +WS++L AC I+ N L AA LF+ME + YV +SNIY
Sbjct: 608 AEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYA 667
Query: 549 AAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
AAG W+N K K M +R ++K P YS+++
Sbjct: 668 AAGQWENVSKVHKAMRDRGVKKLPAYSWVE 697
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 139/447 (31%), Positives = 234/447 (52%), Gaps = 4/447 (0%)
Query: 67 LSTKVIIF-YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
+ST ++I Y K G++ ARK FD M ER V+WT +I GY+Q + A +F M R
Sbjct: 84 VSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRC 143
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
G + T+ + L C +Q I K + L V + L+D Y K ++ A
Sbjct: 144 GTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLA 203
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGG 245
LF+ + D VS+NAMI G + G ++ + LF M G+KP FT ++L A++G
Sbjct: 204 CQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGL 263
Query: 246 IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALI 305
+++ QIH +IK + ++ +L+D Y+K+ S+ A +L+ M + D +S +I
Sbjct: 264 DDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVII 323
Query: 306 SGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS 365
SG+A D H K AFDLF+++ ML+I +N +GRQIHA +
Sbjct: 324 SGYAWDGKH-KYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTA 382
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKK 425
+ VGN+L+DMYAK G+ +A F + ++ + WT++I+ Y + G+ E ++L+ K
Sbjct: 383 DSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNK 442
Query: 426 MKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRG 485
M+ ++ + TF SLL A + G +L + +I K + S ++D++A+ G
Sbjct: 443 MRQASVIADQATFASLLRASASIASLSLGKQLHSFII-KSGFMSNVFSGSALLDVYAKCG 501
Query: 486 QLESAYNMIRQMNIKPTASLWSAILGA 512
++ A ++M + S W+A++ A
Sbjct: 502 SIKDAVQTFQEMPDRNIVS-WNAMISA 527
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 182/355 (51%), Gaps = 15/355 (4%)
Query: 164 ENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM 223
+N + ++ Y K G + +A LF+ + + V+W +IGG + ++F LF M
Sbjct: 81 KNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQM 140
Query: 224 MRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
R G +PD T ++L G +I+Q+ IIKLG +S + +L+D Y K +
Sbjct: 141 QRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRL 200
Query: 284 RSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNI 343
A QL++ M + D +S A+I+G+++D K A +LF +M + G+ +
Sbjct: 201 DLACQLFKEMPEIDSVSYNAMITGYSKDGLDEK-AVNLFVEM--QNSGLKPTEFTFAAVL 257
Query: 344 CANVA--SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVI 401
CAN+ + LG+QIH+F K ++ V NAL+D Y+K + DA + FDEM +++ +
Sbjct: 258 CANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGV 317
Query: 402 SWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM 461
S+ +I+GYA G A +L+++++ F ++L S+T WE+
Sbjct: 318 SYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNT----LDWEM-GRQ 372
Query: 462 INKYRILPRAEHF----SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
I+ I+ A+ + +VD++A+ G+ E A MI +A W+A++ A
Sbjct: 373 IHAQTIVTTADSEILVGNSLVDMYAKCGKFEEA-EMIFTNLTHRSAVPWTAMISA 426
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 37/212 (17%)
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVIS------- 402
LN+ I A K D + N + + K+GE++ A + F++M KN +S
Sbjct: 33 LNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISG 92
Query: 403 ------------------------WTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTF 438
WT LI GY++ EA EL+ +M+ G P+ VTF
Sbjct: 93 YVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTF 152
Query: 439 LSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMN 498
++LL C+ + + ++ T +I K R + +VD + + +L+ A + ++M
Sbjct: 153 VTLLSGCNGHEMGNQITQVQTQII-KLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMP 211
Query: 499 IKPTASLWSAILGACSIYGNTSLGELAARNLF 530
+ S + I G Y L E A NLF
Sbjct: 212 EIDSVSYNAMITG----YSKDGLDEKAV-NLF 238
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 185/524 (35%), Positives = 303/524 (57%), Gaps = 5/524 (0%)
Query: 57 ITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENAL 116
I G+ S+L + + ++ Y K V +ARK FD M ER+ V W M+SG +N + A+
Sbjct: 133 IVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAI 192
Query: 117 LVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLY 176
L+F M++ G+ + T ++ L A ++ L G IQ K F + +V + L LY
Sbjct: 193 LIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLY 252
Query: 177 AKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLG 236
+KCG IE A +LF +I + D+VS+NAMI G + S LF+ ++ G K + ++
Sbjct: 253 SKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIV 312
Query: 237 SILRA--SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML 294
++ G + L + IH K G+ S++ ++ +L VY++ I SA L+
Sbjct: 313 GLIPVFFPFGHLHLTRC--IHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESS 370
Query: 295 KTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGR 354
+ + S A+ISG+A++ +++A LF++M ++ + V + +L+ CA + +L+LG+
Sbjct: 371 EKSLASWNAMISGYAQN-GLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGK 429
Query: 355 QIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG 414
+H + + V ALIDMYAK G I +A R F M +KN ++W ++I+GY HG
Sbjct: 430 WVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHG 489
Query: 415 YGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF 474
YGHEA+ L+ +M H + P VTFLS+L+ACSH GL EG E+F M++ + P EH+
Sbjct: 490 YGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHY 549
Query: 475 SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEP 534
+C+VDL R G L+ A + IR+M ++P +W A+LGAC I+ + +L LA+ LF+++P
Sbjct: 550 ACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDP 609
Query: 535 EKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+ YV+LSNIY+A + A R +++ R L K PG + ++
Sbjct: 610 QNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIE 653
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 236/473 (49%), Gaps = 9/473 (1%)
Query: 47 RQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGY 106
Q + HA II NG ++L TK+ + + + A F +P ++ + +I +
Sbjct: 24 HQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNVLIRAF 83
Query: 107 AQNGYDENALLVFSAMLRS-GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVEN 165
+ N +A+ +++ + +S + + FTY+ + + + + SI G F +
Sbjct: 84 SLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGL--LLHAHSIVAG-FGSD 140
Query: 166 LFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR 225
LFV SA++ Y K + A +F+ + +D V WN M+ GL D++ +F M++
Sbjct: 141 LFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVK 200
Query: 226 QGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRS 285
G+ D T+ ++L +L I L +K+G S + L +Y+K G I +
Sbjct: 201 GGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIET 260
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
A L+ + + D++S A+ISG+ +N ++ + LFK++++ ++ + ++ +
Sbjct: 261 ARLLFGQIGQPDLVSYNAMISGYTC-NNETESSVRLFKELLVSGEKVNSSSIVGLIPVFF 319
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
L+L R IH F K +++V AL +Y++ EI A FDE +K++ SW +
Sbjct: 320 PFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNA 379
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG-LTCEGWELFTDMINK 464
+I+GYA++G +AI L+++M+ + PN VT S+L AC+ G L+ W D+IN+
Sbjct: 380 MISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKW--VHDLINR 437
Query: 465 YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
+ ++D++A+ G + A + M K A W+A++ ++G
Sbjct: 438 ESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEK-NAVTWNAMISGYGLHG 489
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 90/181 (49%), Gaps = 4/181 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
+P T S+L C A +H I +ESN+ +ST +I YAK G + A++ F
Sbjct: 408 NPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLF 467
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
MPE+N V+W AMISGY +GY AL +F+ ML S V T+ S L AC+ ++
Sbjct: 468 SMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVR 527
Query: 149 GGRMIQGSIQKGRFVENLFVKSA-LLDLYAKCGWIEDAWILFER--IERKDVVSWNAMIG 205
G I S+ E L A ++DL + G ++ A + +E V W A++G
Sbjct: 528 EGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPV-WGALLG 586
Query: 206 G 206
Sbjct: 587 A 587
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 83/199 (41%), Gaps = 11/199 (5%)
Query: 248 LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG 307
L +++Q H II GL + L + +I A L+ ++ D+ LI
Sbjct: 23 LHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNVLIRA 82
Query: 308 FARDDNHSKEAFDLF----KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY 363
F+ +++ S A L+ K L+ + + L+ + F
Sbjct: 83 FSLNNSPSS-AVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHAHSIVAGFG--- 138
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELY 423
D VG+A++ Y K +A A + FD M +++ + W ++++G K+ EAI ++
Sbjct: 139 ---SDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIF 195
Query: 424 KKMKHEGMVPNDVTFLSLL 442
M G+ + T ++L
Sbjct: 196 GDMVKGGIGFDSTTVAAVL 214
>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 183/534 (34%), Positives = 309/534 (57%), Gaps = 8/534 (1%)
Query: 47 RQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGY 106
RQ H++ I ++ + + ++ FY KVG V ARK FDRMPERN+VSWT MISGY
Sbjct: 132 RQVHVLG---IKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGY 188
Query: 107 AQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENL 166
A + AL VF M N+F ++S L A ++ G+ + + K +E +
Sbjct: 189 ASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFV 248
Query: 167 FVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ 226
V +AL+ +YAKCG + + +LFE K+ ++W+A+I G + G + + LF M
Sbjct: 249 SVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYA 308
Query: 227 GMKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIR 284
G P FTL +L+A V IE K Q H ++K G E+ +L+D+YAK+G
Sbjct: 309 GFVPSEFTLVGVLKACSDVAAIEEGK--QTHGYLLKSGYETQIYTATALVDMYAKFGFTG 366
Query: 285 SAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNIC 344
A + + +L+ D++ T++I+G+ ++ ++EA ++ M ++K+ +++ + +L C
Sbjct: 367 DARKGFDFLLEPDLVLWTSIIAGYVQNGK-NEEALSMYGRMQMRKILPNELTMASVLKAC 425
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWT 404
+N+A+L G+QIHA KY + ++ +AL MYAK G + + F M ++++SW
Sbjct: 426 SNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWN 485
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK 464
++I+G +++G+G EA+EL+++M+ EG P+ +TF+++L ACSH G+ GW F M ++
Sbjct: 486 AMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMMFDE 545
Query: 465 YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGEL 524
+ ++PR EH++C+VD+ +R G+L A I I LW +L AC + N LG
Sbjct: 546 FCLVPRVEHYACMVDVLSRAGKLNEAKEFIESAIIDHGMCLWRILLPACRNHCNYELGAY 605
Query: 525 AARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
A L ++ +S YV+LS+IYTA G + + R++M+ R +RK G S+++
Sbjct: 606 AGEKLMELGSRESSAYVLLSSIYTAMGRLADVVRVRRMMKVRGVRKETGCSWIE 659
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 148/527 (28%), Positives = 267/527 (50%), Gaps = 10/527 (1%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNL-HLSTKVIIFYAKVGDVL 82
P + S Y L+Q+ D+K+ ++ ++HAHII Y S+ +L+ +I FYAK G +
Sbjct: 2 PHPPQNRSFYNLLIQYA-DQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLH 60
Query: 83 SARKAFDRMPERNVVSWTAMISGYAQNGYDEN--ALLVFSAMLRSGVRANQFTYSSALRA 140
A+ F+ + +NVVS+ +I G + NG + L +F M+ + + + T+ A
Sbjct: 61 GAKLVFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTA 120
Query: 141 CA-RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS 199
A + R + K ++++FV S+L++ Y K G + +A LF+R+ +++VS
Sbjct: 121 AALNLGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVS 180
Query: 200 WNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLII 259
W MI G A + ++ +F M + F S+L A V + Q+H +++
Sbjct: 181 WTTMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVV 240
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
K G+ + +L+ +YAK G++ + L+ + I+ +ALI+G+++ + S +A
Sbjct: 241 KNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGD-SHKAL 299
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMY 379
LF M + L +L C++VA++ G+Q H + K AL+DMY
Sbjct: 300 KLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMY 359
Query: 380 AKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFL 439
AK G DA + FD + + +++ WTS+IAGY ++G EA+ +Y +M+ ++PN++T
Sbjct: 360 AKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMA 419
Query: 440 SLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
S+L ACS+ +G ++ I KY + P S + ++A+ G LE + R+M
Sbjct: 420 SVLKACSNLAALEQGKQIHARTI-KYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQ 478
Query: 500 KPTASLWSAILGACSI--YGNTSLGELAARNLFDMEPEKSVNYVVLS 544
+ S W+A++ S +G +L L +P+ VLS
Sbjct: 479 RDIVS-WNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLS 524
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 145/264 (54%), Gaps = 1/264 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T + +L+ C D A + H +++ +GYE+ ++ +T ++ YAK G ARK FD +
Sbjct: 316 TLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFL 375
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
E ++V WT++I+GY QNG +E AL ++ M + N+ T +S L+AC+ + L+ G+
Sbjct: 376 LEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGK 435
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I K L ++SAL +YAKCG +E+ ++F R+ ++D+VSWNAMI GL+ G
Sbjct: 436 QIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNG 495
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLT 270
++ LF M +G KPD T ++L A S GI + + + + L +
Sbjct: 496 HGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMMFDEFCLVPRVEHY 555
Query: 271 GSLIDVYAKYGSIRSAYQLYRSML 294
++DV ++ G + A + S +
Sbjct: 556 ACMVDVLSRAGKLNEAKEFIESAI 579
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 182/532 (34%), Positives = 301/532 (56%), Gaps = 2/532 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IH + +S++ ++T +++ YAK G+ A++ F + R++V+W+A+I+ Q GY
Sbjct: 351 IHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGY 410
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
E AL +F M ++ N+ T S L ACA + L+ G+ I K +L +A
Sbjct: 411 PEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTA 470
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+ +YAKCG+ A F R+ +D+V+WN++I G A G ++ +F + + PD
Sbjct: 471 LVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPD 530
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY- 290
T+ ++ A +L + + IH LI+KLG ES + +LID+YAK GS+ SA L+
Sbjct: 531 AGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFN 590
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
++ D ++ +I+ + ++ H+KEA F M L+ + V +L A +A+
Sbjct: 591 KTDFTKDEVTWNVIIAAYMQN-GHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAF 649
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
G HA + + VGN+LIDMYAK G++ + + F+EM K+ +SW ++++GY
Sbjct: 650 REGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGY 709
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
A HG+G AI L+ M+ + + V+F+S+L AC H GL EG ++F M +KY I P
Sbjct: 710 AVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPD 769
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
EH++C+VDL R G + I+ M ++P A +W A+LG+C ++ N LGE+A +L
Sbjct: 770 LEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLV 829
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+EP ++VVLS+IY +G W +A K R M + L+K PG S+++ K
Sbjct: 830 KLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNK 881
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 164/522 (31%), Positives = 271/522 (51%), Gaps = 17/522 (3%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IH ++ + S + S +I Y+K GDV AR+ FD+M +++ VSW M++GYA NG
Sbjct: 252 IHGYVFRRDFSSAV--SNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGC 309
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
L +F M VR N+ + SA A A L+ G+ I G + R ++ V +
Sbjct: 310 FVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATP 369
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+ +YAKCG E A LF ++ +D+V+W+A+I L G+ +++ LF+ M Q MKP+
Sbjct: 370 LMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPN 429
Query: 232 CFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
TL SIL A + L+K+ + IH +K ++S +L+ +YAK G +A +
Sbjct: 430 RVTLMSILPA-CADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTF 488
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
M DI++ +LI+G+A+ + A D+F + L + D + ++ CA + L
Sbjct: 489 NRMSSRDIVTWNSLINGYAQIGD-PYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDL 547
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAG 409
+ G IH K D V NALIDMYAK G + A F++ K+ ++W +IA
Sbjct: 548 DQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAA 607
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
Y ++G+ EAI + +M+ E PN VTF+S+L A ++ EG F I + L
Sbjct: 608 YMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMA-FHACIIQMGFLS 666
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
+ ++D++A+ GQL+ + + +M+ K T S W+A+L +++G+ A L
Sbjct: 667 NTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVS-WNAMLSGYAVHGHGD----RAIAL 721
Query: 530 FDMEPEK-----SVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
F + E SV++V + + AG + RK M ++
Sbjct: 722 FSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDK 763
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 213/401 (53%), Gaps = 8/401 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IHA II +G++ + H T +I Y+ AR FD P + + W +MI Y ++
Sbjct: 51 IHAQIIVSGFKHH-HSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQ 109
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
AL ++ M+ G+ +++T++ L+AC LQ G G I + ++F+ +
Sbjct: 110 YNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAG 169
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+D+Y+K G ++ A +F+++ ++DVV+WNAMI GL+ ++ FRSM G++P
Sbjct: 170 LVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPS 229
Query: 232 CFTLGSILRA--SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
+L ++ + IEL + IH + + S+ ++ LID+Y+K G + A ++
Sbjct: 230 SVSLLNLFPGICKLSNIELCR--SIHGYVFRRDFSSA--VSNGLIDLYSKCGDVDVARRV 285
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ M+ D +S +++G+A + E +LF M L + I+ V A
Sbjct: 286 FDQMVDQDDVSWGTMMAGYAHNGCFV-EVLELFDKMKLGNVRINKVSAVSAFLAAAETID 344
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
L G++IH A + + D V L+ MYAK GE A + F + +++++W+++IA
Sbjct: 345 LEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAA 404
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
+ GY EA+ L+++M+++ M PN VT +S+L AC+ L
Sbjct: 405 LVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSL 445
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 189/385 (49%), Gaps = 5/385 (1%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNG 60
I+ A +TG ++AL + + P+ T MS+L C D + IH +
Sbjct: 401 IIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKAD 460
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+S+L T ++ YAK G +A F+RM R++V+W ++I+GYAQ G NA+ +F
Sbjct: 461 MDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFY 520
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
+ S + + T + ACA + L G I G I K F + VK+AL+D+YAKCG
Sbjct: 521 KLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCG 580
Query: 181 WIEDAWILFERIE-RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
+ A LF + + KD V+WN +I G ++ F M + P+ T S+L
Sbjct: 581 SLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVL 640
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
A+ + H II++G S+ + SLID+YAK G + + +L+ M D +
Sbjct: 641 PAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTV 700
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI-HA 358
S A++SG+A H A LF M ++ ID V +L+ C + + GR+I H+
Sbjct: 701 SWNAMLSGYAV-HGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHS 759
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSG 383
+ KY D ++D+ ++G
Sbjct: 760 MSDKYHIKPDLEHYACMVDLLGRAG 784
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 197/563 (34%), Positives = 309/563 (54%), Gaps = 12/563 (2%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
D LD T+ + L C R LIHA I +G + L+ +I Y K G + A
Sbjct: 36 DLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWA 95
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR- 143
R F+ E + VSW ++I+GY + G ++ L + MLR G+ N + SAL+AC
Sbjct: 96 RLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSN 155
Query: 144 -MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
++ G+M+ G K ++ V +ALLD YAK G +EDA +F+ + +VV +NA
Sbjct: 156 FSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNA 215
Query: 203 MIGG-LAMQG----FNDDSFWLFRSMMRQGMKPDCFTLGSILRA--SVGGIELMKISQIH 255
MI G L M+ F +++ +LF M +GMKP FT SIL+A ++ E K QIH
Sbjct: 216 MIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGK--QIH 273
Query: 256 DLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHS 315
I K L+S + +L+++Y+ GSI + + S K D++S T+LI G ++
Sbjct: 274 AQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQN-GQF 332
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNAL 375
+ LF +++ D+ + +ML+ CAN+A++ G QIHA+A K + N+
Sbjct: 333 EGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQ 392
Query: 376 IDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND 435
I MYAK G+I AN F E + +++SW+ +I+ A+HG EA++L++ MK G+ PN
Sbjct: 393 ICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNH 452
Query: 436 VTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIR 495
+TFL +L ACSH GL EG F M + I P +H +C+VDL R G+L A + I
Sbjct: 453 ITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIM 512
Query: 496 QMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDN 555
+ +W ++L AC ++ T G+ A + ++EPE + +YV+L NIY AG
Sbjct: 513 DSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMP 572
Query: 556 ARKTRKLMEERSLRKNPGYSFLQ 578
A + R LM++R ++K PG S+++
Sbjct: 573 ATEIRNLMKDRGVKKEPGLSWIE 595
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 137/439 (31%), Positives = 232/439 (52%), Gaps = 20/439 (4%)
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
MP+RNVVSW ++ISGY Q G+ + +F S +R ++FT+S+AL C R L+ G
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
R+I I + + ++L+D+Y KCG I+ A ++FE + D VSWN++I G
Sbjct: 61 RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS----VGGIELMKISQIHDLIIKLGLESS 266
G ND+ L M+R G+ + + LGS L+A IE K+ +H +KLGL+
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKM--LHGCAVKLGLDLD 178
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR----DDNHSKEAFDLF 322
+ +L+D YAK G + A ++++ M +++ A+I+GF + D + EA LF
Sbjct: 179 VVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLF 238
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
+M + M + +L C+ + + G+QIHA FKY D +GNAL+++Y+ S
Sbjct: 239 FEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLS 298
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
G I D + F +V+SWTSLI G+ ++G + L+ ++ G P++ T +L
Sbjct: 299 GSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIML 358
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV----VDLFARRGQLESAYNMIRQMN 498
AC++ G + I+ Y I +F+ + + ++A+ G ++SA NM +
Sbjct: 359 SACANLAAVKSG-----EQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSA-NMTFKET 412
Query: 499 IKPTASLWSAILGACSIYG 517
P WS ++ + + +G
Sbjct: 413 KNPDIVSWSVMISSNAQHG 431
>gi|125550837|gb|EAY96546.1| hypothetical protein OsI_18451 [Oryza sativa Indica Group]
Length = 591
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 199/570 (34%), Positives = 308/570 (54%), Gaps = 19/570 (3%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLS-----------TKVIIFY 75
LL+ + + LL C + R +HA ++ N L S ++ Y
Sbjct: 8 LLNYARFSGLLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNALVSMY 67
Query: 76 AKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA-NQFTY 134
A+ G A + FD M R+ VSW ++I+ G +AL +F MLRS RA ++ T+
Sbjct: 68 ARCGRREDAARVFDEMRVRDAVSWNSLIAASRGAG---DALALFRRMLRSDARACDRATF 124
Query: 135 SSALRACARM--RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI 192
++ L CAR L M+ G + F + V +AL+ Y +CG A +F +
Sbjct: 125 TTVLSECARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGM 184
Query: 193 ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS 252
K+V++W AMI G+A +SF LF M+R + + T L A + +
Sbjct: 185 AEKNVITWTAMISGMARAELYKESFSLFGQMIRT-VDANNATYSCTLLACARSLAAREGQ 243
Query: 253 QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDD 312
Q+H L++K G E+ + L+DVY+K G + A ++RS + D + T ++ GFA++
Sbjct: 244 QVHGLVVKAGFEADLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQNG 303
Query: 313 NHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG 372
K AF+LF +M+ ID+ + +L A LG+QIHA K + V
Sbjct: 304 LEEK-AFELFAEMVGAGNEIDENTVSTVLGAFGASAPFALGKQIHALVIKRCFGVNTYVC 362
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
N L++MY+K GE+ ++ + FDEM KN +SW S+IA +A+HG+G E +L++ MK +G
Sbjct: 363 NGLVNMYSKCGELRESVQVFDEMPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAK 422
Query: 433 PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYN 492
P DVTFLSLL ACSH G +G E+ M ++Y +LPR EH++CVVD+ R G L+ A +
Sbjct: 423 PTDVTFLSLLHACSHVGSAKKGLEILNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDAKS 482
Query: 493 MIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGA 552
I +A LW A++GACS +GN+ +G+ AA L ++P + YV+LSNIY++ G
Sbjct: 483 FIEDGPFTDSALLWQALMGACSFHGNSEVGKHAAEKLLLLDPSCTAAYVLLSNIYSSEGR 542
Query: 553 WDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
WD+ K K M E LRK+ G S+++ K+
Sbjct: 543 WDDRAKVMKRMSEMGLRKDTGKSWIELEKE 572
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 191/571 (33%), Positives = 299/571 (52%), Gaps = 38/571 (6%)
Query: 15 QALKFSLSCPDTLLD---PSTYMSLLQFCIDKKAE-RQAHLIHAHIITNGYESNLHLSTK 70
Q+ K S S P LD P + LL +D + R +H+ II N L K
Sbjct: 20 QSRKVSSSLPKLELDQKSPQETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVK 79
Query: 71 VIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
++ YA + DV SARK FD +PERNV+ MI Y NG+ + VF M VR +
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE 190
+T+ L+AC+ + GR I GS K LFV + L+ +Y KCG++ +A ++ +
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 191 RIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMK 250
+ R+DVVSWN+++ G A DD+ + R M + D T+ S+L A V
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA-VSNTTTEN 258
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR 310
+ + D+ K+G K ++S +I G
Sbjct: 259 VMYVKDMFFKMG--------------------------------KKSLVSWNVMI-GVYM 285
Query: 311 DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA 370
+ EA +L+ M D V + +L C + ++L+LG++IH + + + +
Sbjct: 286 KNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL 345
Query: 371 VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG 430
+ NALIDMYAK G + A F+ M ++V+SWT++I+ Y G G +A+ L+ K++ G
Sbjct: 346 LENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSG 405
Query: 431 MVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA 490
+VP+ + F++ L ACSH GL EG F M + Y+I PR EH +C+VDL R G+++ A
Sbjct: 406 LVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEA 465
Query: 491 YNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAA 550
Y I+ M+++P +W A+LGAC ++ +T +G LAA LF + PE+S YV+LSNIY A
Sbjct: 466 YRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKA 525
Query: 551 GAWDNARKTRKLMEERSLRKNPGYSFLQSSK 581
G W+ R +M+ + L+KNPG S ++ ++
Sbjct: 526 GRWEEVTNIRNIMKSKGLKKNPGASNVEVNR 556
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 201/557 (36%), Positives = 302/557 (54%), Gaps = 8/557 (1%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHII-TNGYESNLHLSTKVIIFYAKVGDVLSA 84
+LL LL+ I + R ++HA I+ T L+ +I Y+K+ SA
Sbjct: 2 SLLTADALGLLLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESA 61
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
R P RNVVSWT+++SG AQNG+ AL F M R GV N FT+ +A A +
Sbjct: 62 RLVLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASL 121
Query: 145 RWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
R G+ I +++ GR ++ +FV + D+Y K +DA LF+ I +++ +WNA
Sbjct: 122 RLPVTGKQIHALAVKCGRILD-VFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAY 180
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGL 263
I G ++ F R G +P+ T L A G+ L Q+H L+ + G
Sbjct: 181 ISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGF 240
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKE-AFDLF 322
++ + LID Y K IRS+ ++ M + +S +L++ + + NH E A L+
Sbjct: 241 DTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQ--NHEDEKASVLY 298
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
+ + D ++ +L+ CA +A L LGR IHA A K + VG+AL+DMY K
Sbjct: 299 LRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKC 358
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGM--VPNDVTFLS 440
G I D+ +AFDEM +KN+++ SLI GYA G A+ L++ M G PN +TF+S
Sbjct: 359 GCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVS 418
Query: 441 LLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIK 500
LL ACS G G ++F M + Y I P AEH+SC+VD+ R G +E A+ I++M IK
Sbjct: 419 LLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIK 478
Query: 501 PTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTR 560
PT S+W A+ AC ++G LG LAA NLF ++P+ S N+V+LSN + AAG W A R
Sbjct: 479 PTISVWGALQNACRMHGKPHLGILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVR 538
Query: 561 KLMEERSLRKNPGYSFL 577
+ M+ ++K GYS++
Sbjct: 539 EEMKGVGIKKGAGYSWI 555
>gi|297797117|ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
gi|297312278|gb|EFH42702.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
Length = 749
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 192/561 (34%), Positives = 311/561 (55%), Gaps = 9/561 (1%)
Query: 21 LSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGD 80
L C D + D + +Q CI + ++HA +IT G+ S ++T ++ YAK+G
Sbjct: 156 LGC-DIVPDEYALSAAIQACIGVDSIVVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGR 214
Query: 81 VLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRA 140
+ + K F+ + RN VSW AMISG+ NG A F ML +R N + S +A
Sbjct: 215 IGDSCKVFNSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKA 274
Query: 141 CARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILF-ERIERKDV-V 198
++ ++ GR I + N+ V +AL+D++AKCG + ++W +F V +
Sbjct: 275 IGQLGDVEKGRYINRIAFEIGMQSNIHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNL 334
Query: 199 SWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLI 258
WNAMI G + G +++ LF M + +K D +T S L + L + Q+H +I
Sbjct: 335 PWNAMISGFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMI 394
Query: 259 IKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEA 318
K G L +L+D YAK G + + +L+ + +++ IS T L++ +++ + ++A
Sbjct: 395 WKSG-SIGVSLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQS-SEWEDA 452
Query: 319 FDLFKDMILKKMGI--DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALI 376
+F M ++MG + V +L CA++ SL G+Q+H+ K + D V + LI
Sbjct: 453 LSVFSQM--REMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVESVLI 510
Query: 377 DMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDV 436
DMYAK G + DA + F+ + D +VISWT++I+GYA+HG +A+EL++KM+ PN
Sbjct: 511 DMYAKCGSVRDAIKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPNSA 570
Query: 437 TFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQ 496
TFL LLFACSH GL EG F M +Y ++P EH++CVVD+ R G+L A+ I +
Sbjct: 571 TFLCLLFACSHGGLVDEGLRYFHLMEERYGLVPEIEHYACVVDILGRVGRLTEAWKFIMK 630
Query: 497 MNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNA 556
M I+P +WS +LGAC ++GN L ++AA+ + P+ V+LSN Y AG +
Sbjct: 631 MPIEPDEKVWSTLLGACRVHGNIQLAKIAAQKVLSYNPDDFAALVLLSNTYREAGNIEGG 690
Query: 557 RKTRKLMEERSLRKNPGYSFL 577
R +M+ +++RK G S++
Sbjct: 691 LNVRNMMKSQAMRKETGMSWI 711
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 146/543 (26%), Positives = 270/543 (49%), Gaps = 13/543 (2%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIIT-NGYESNLHLS-TKVIIFYAKVGDVLSARKAF 88
++ + L++ D++ ++A IH +I E +L + +++I Y+K D SAR+ F
Sbjct: 62 TSLIELIRESADERCLKKAKSIHGFVIKFQLIEKSLTVMLNQLVIAYSKCSDFGSARQVF 121
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D +P+++V SWT ++ G +NG+ + + F +L + +++ S+A++AC + +
Sbjct: 122 DEIPQKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGVDSIV 181
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G M+ + F FV ++LL +YAK G I D+ +F +E ++ VSWNAMI G
Sbjct: 182 VGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISGFV 241
Query: 209 MQGFNDDSFWLFRSMMRQGMKPD--CFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
G +++ F M+ + ++P+ CF S +G +E K I+ + ++G++S+
Sbjct: 242 SNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVE--KGRYINRIAFEIGMQSN 299
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC--TALISGFARDDNHSKEAFDLFKD 324
+ +LID++AK G + ++ ++ S ++ A+ISGF H +EA LF
Sbjct: 300 IHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAMISGFTI-SGHGEEAMLLFLR 358
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M + D C LN A++ SL +Q+H +K S ++ NAL+D YAK GE
Sbjct: 359 MCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWK-SGSIGVSLCNALMDAYAKCGE 417
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ + FD + N ISWT+L+ Y++ +A+ ++ +M+ G PN VTF +L +
Sbjct: 418 LDAMRKLFDTWEESNQISWTTLVTAYSQSSEWEDALSVFSQMREMGFQPNQVTFSGVLAS 477
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
C+ + E + + K S ++D++A+ G + A + + P
Sbjct: 478 CASL-CSLEYGQQVHSLTCKTGFARDKCVESVLIDMYAKCGSVRDAIKVFESLK-DPDVI 535
Query: 505 LWSAILGACSIYGNTSLG-ELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
W+A++ + +G EL + + S ++ L + G D + LM
Sbjct: 536 SWTAMISGYAQHGMAKDALELFRKMELVLPNPNSATFLCLLFACSHGGLVDEGLRYFHLM 595
Query: 564 EER 566
EER
Sbjct: 596 EER 598
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 191/581 (32%), Positives = 309/581 (53%), Gaps = 30/581 (5%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L T+ +L + ++ L+HA II +G + + K++ + GD+ A
Sbjct: 34 LKSPTHQTLHHLLDQCSSMKRLKLVHAQIILHGLAAQVVTLGKLLSLCVQEGDLRYAHLL 93
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD++P+ N + +I GY+ + +LL+F M+ +G NQFT+ L+ACA +
Sbjct: 94 FDQIPQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKACAAKPFY 153
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
++ K + V++A+L Y C I A +F+ I + +VSWN+MI G
Sbjct: 154 WEAVIVHAQAIKLGMGPHACVQNAILTAYVACRLILSARQVFDDISDRTIVSWNSMIAGY 213
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
+ GF D++ LF+ M++ G++ D FTL S+L AS L +H I+ G+E +
Sbjct: 214 SKMGFCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYIVITGVEIDS 273
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDD---------NHSK-- 316
+T +LID+YAK G ++ A ++ ML D++S T++++ +A NH
Sbjct: 274 IVTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIFNHMPVK 333
Query: 317 -------------------EAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
EA +LF M + + DD L +L+ C+N L LG+Q H
Sbjct: 334 NVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGDLALGKQAH 393
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
+ + + N+LIDMYAK G + A F M +KNV+SW +I A HG+G
Sbjct: 394 CYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVIIGALALHGFGE 453
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
EAIE++K M+ G+ P+++TF LL ACSH+GL G F MI+ +RI P EH++C+
Sbjct: 454 EAIEMFKSMQASGLYPDEITFTGLLSACSHSGLVDMGRYYFDIMISTFRISPGVEHYACM 513
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKS 537
VDL R G L A +I++M +KP +W A+LGAC IYGN + + + L ++ S
Sbjct: 514 VDLLGRGGFLGEAMTLIQKMPVKPDVVVWGALLGACRIYGNLEIAKQIMKQLLELGRFNS 573
Query: 538 VNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
YV+LSN+Y+ + WD+ +K RK+M++ ++K SF++
Sbjct: 574 GLYVLLSNMYSESQRWDDMKKIRKIMDDSGIKKCRAISFIE 614
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 199/559 (35%), Positives = 307/559 (54%), Gaps = 20/559 (3%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYE-SNLHLSTKVIIFYAKVGDVLSARKAFDR- 90
Y LLQ C + LIH+ + T G+ H ++II Y+K+GD+ SAR FD
Sbjct: 28 YDHLLQCCTSLTTLK---LIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHR 84
Query: 91 -------MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
N M+ YA G A+ ++ M R GV N FTY L+ CA
Sbjct: 85 HHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCAS 144
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
G ++ G + + F +LFV++AL+D+YAKCG I DA +F+R+ +DVV W AM
Sbjct: 145 ELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAM 204
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG--GIELMKISQIHDLIIKL 261
I + LFR M +G D T S+ A VG G M IS +H +
Sbjct: 205 ITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASA-VGQLGDGRMAIS-VHGYAVLN 262
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDL 321
G + S++ +YAK G++ A ++ M + + IS +++SG+ ++ +A L
Sbjct: 263 GFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQN-GRPTDALSL 321
Query: 322 FKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
F M + + V +M++ C+ + S +LGR++H F + D + NA++DMY K
Sbjct: 322 FNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMK 381
Query: 382 SGEIADANRAFD--EMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFL 439
G++ A F+ E+G+++V SW LI+GY HG+G EA+EL+ +M+ EG+ PND+TF
Sbjct: 382 CGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFT 441
Query: 440 SLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
S+L ACSH GL EG + F DM K + P +H++C+VD+ R G L A+ +I+++
Sbjct: 442 SILSACSHAGLIDEGRKCFADM-TKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPS 500
Query: 500 KPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKT 559
+P+ +W A+L AC I+GNT LGE+AA NLF +EPE + YV++SNIY A+ W
Sbjct: 501 RPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMV 560
Query: 560 RKLMEERSLRKNPGYSFLQ 578
R+ M+ R L+K +S ++
Sbjct: 561 RQNMKSRGLKKPAAFSVIE 579
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 196/391 (50%), Gaps = 14/391 (3%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
TY +L+ C + ++H ++ G+ S+L + ++ YAK G++ A + FDRM
Sbjct: 134 TYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRM 193
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
R+VV WTAMI+ Y Q AL++F M G ++ T S A + L GR
Sbjct: 194 LIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQ---LGDGR 250
Query: 152 M---IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
M + G F+ ++ V ++++ +YAKCG +E A ++F+R+E ++ +SWN+M+ G
Sbjct: 251 MAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYT 310
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS--VGGIELMKISQIHDLIIKLGLESS 266
G D+ LF M P+ T ++ A +G L + ++H+ +I ++
Sbjct: 311 QNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGR--KLHNFVISSKMDID 368
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRS--MLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
L +++D+Y K G + +A +++ + + + D+ S LISG+ H KEA +LF
Sbjct: 369 TTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGV-HGHGKEALELFSR 427
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M ++ + +D+ +L+ C++ ++ GR+ A K + ++DM ++G
Sbjct: 428 MQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGF 487
Query: 385 IADANRAFDEMGDKNVIS-WTSLIAGYAKHG 414
+ +A R ++ + W +L+ HG
Sbjct: 488 LNEAFRLIKKIPSRPSDEVWGALLLACRIHG 518
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 92/186 (49%), Gaps = 3/186 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
+P T + ++ C ++ +H +I++ + + L ++ Y K GD+ +A + F
Sbjct: 333 NPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMF 392
Query: 89 D--RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
+ + ER+V SW +ISGY +G+ + AL +FS M GV N T++S L AC+
Sbjct: 393 NNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGL 452
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIG 205
+ GR + K + + ++D+ + G++ +A+ L ++I R W A++
Sbjct: 453 IDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLL 512
Query: 206 GLAMQG 211
+ G
Sbjct: 513 ACRIHG 518
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 190/585 (32%), Positives = 327/585 (55%), Gaps = 8/585 (1%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPSTY--MSLLQFCIDKKAERQAHLIHAHIITN 59
+++ A GQ +AL+ L P+TY ++ LQ C D +Q IHA ++ +
Sbjct: 252 SMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKS 311
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
Y N+ ++ +I YA+ G + A F M + + +SW +M+SG+ QNG AL +
Sbjct: 312 SYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFY 371
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
M +G + + S + A AR G I K +L V ++L+D+YAK
Sbjct: 372 HEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKF 431
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
++ +F+++ KDVVSW +I G A G + + LFR + +G+ D + SIL
Sbjct: 432 CSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSIL 491
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
A G + + +IH II+ GL S L ++DVY + G++ A +++ + D++
Sbjct: 492 LACSGLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVV 550
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGI--DDVILCLMLNICANVASLNLGRQIH 357
S T++IS + + + EA +LF ++K+ G+ D + L +L+ A++++L G++IH
Sbjct: 551 SWTSMISCYVHN-GLANEALELFH--LMKETGVEPDSISLVSILSAAASLSALKKGKEIH 607
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
F + + ++ + L+DMYA+ G + + F+ + +K+++ WTS+I Y HG G
Sbjct: 608 GFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGR 667
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
AI+L+++M+ E + P+ + F+++L+ACSH+GL EG M +Y++ P EH++C+
Sbjct: 668 AAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACL 727
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKS 537
VDL R LE AY ++ M ++PTA +W A+LGAC I+ N LGE+AA+ L +M+PE
Sbjct: 728 VDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENP 787
Query: 538 VNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
NYV++SN+Y+A W + R M+ L+KNPG S+++ K
Sbjct: 788 GNYVLVSNVYSAERRWKDVEXVRMRMKASGLKKNPGCSWIEVGNK 832
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 160/515 (31%), Positives = 289/515 (56%), Gaps = 15/515 (2%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD T+ +L+ C K R +H I GY S + ++ ++ Y K D+ AR+
Sbjct: 178 LDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQL 237
Query: 88 FDRMPER-NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FDRMPE+ +VVSW +MIS Y+ NG AL +F M ++ + N +T+ +AL+AC +
Sbjct: 238 FDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSF 297
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
++ G I ++ K + N+FV +AL+ +YA+ G + +A +F ++ D +SWN+M+ G
Sbjct: 298 IKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSG 357
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
G ++ + M G KPD + SI+ AS + QIH +K GL+S
Sbjct: 358 FVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSD 417
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
++ SL+D+YAK+ S++ ++ M D++S T +I+G A++ +HS+ A +LF+++
Sbjct: 418 LQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSR-ALELFREVQ 476
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
L+ + +D +++ +L C+ + ++ ++IH++ + S D + N ++D+Y + G +
Sbjct: 477 LEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGECGNVD 535
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A R F+ + K+V+SWTS+I+ Y +G +EA+EL+ MK G+ P+ ++ +S+L A +
Sbjct: 536 YAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAA 595
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA---YNMIRQMNIKPTA 503
+G E+ +I K +L S +VD++AR G LE + +N IR ++
Sbjct: 596 SLSALKKGKEIHGFLIRKGFVL-EGSLASTLVDMYARCGTLEKSRNVFNFIRNKDL---- 650
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSV 538
LW++++ A YG G AA +LF ++S+
Sbjct: 651 VLWTSMINA---YGMHGCGR-AAIDLFRRMEDESI 681
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 162/544 (29%), Positives = 284/544 (52%), Gaps = 19/544 (3%)
Query: 4 VRANFKTGQLKQALK-----FSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIIT 58
+R K G + +A + F+ P Y S+L+ C KKA + +HAH+IT
Sbjct: 47 LREICKRGSVNEAFQSLTDLFANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMIT 106
Query: 59 -NGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALL 117
N +++ LST+++ Y K G ++ A K FD MP + + +W AMI Y NG +L
Sbjct: 107 SNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLE 166
Query: 118 VFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYA 177
++ M SG+ + T+ L+AC ++ + G + G K +V +FV ++++ +Y
Sbjct: 167 LYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYT 226
Query: 178 KCGWIEDAWILFERI-ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLG 236
KC + A LF+R+ E++DVVSWN+MI + G + ++ LF M + + P+ +T
Sbjct: 227 KCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFV 286
Query: 237 SILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT 296
+ L+A + + IH ++K + + +LI +YA++G + A ++ +M
Sbjct: 287 AALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDW 346
Query: 297 DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNL--GR 354
D IS +++SGF ++ + EA + +M + G ++ ++ I A+ S N G
Sbjct: 347 DTISWNSMLSGFVQNGLY-HEALQFYHEM--RDAGQKPDLVAVISIIAASARSGNTLHGM 403
Query: 355 QIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG 414
QIHA+A K D VGN+L+DMYAK + + FD+M DK+V+SWT++IAG+A++G
Sbjct: 404 QIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNG 463
Query: 415 YGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF 474
A+EL+++++ EG+ + + S+L ACS L E+ + +I K L
Sbjct: 464 SHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKG--LSDLVLQ 521
Query: 475 SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEP 534
+ +VD++ G ++ A M + K S W++++ S Y + L A LF +
Sbjct: 522 NGIVDVYGECGNVDYAARMFELIEFKDVVS-WTSMI---SCYVHNGLAN-EALELFHLMK 576
Query: 535 EKSV 538
E V
Sbjct: 577 ETGV 580
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 186/562 (33%), Positives = 313/562 (55%), Gaps = 7/562 (1%)
Query: 21 LSCPDTLLDPSTY--MSLLQFCIDKKAERQAHLIHAHIITNGY-ESNLHLSTKVIIFYAK 77
L C ++ P+ Y +LL+ C + I A ++ GY +S++ + +I + K
Sbjct: 134 LQCSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTK 193
Query: 78 VG-DVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSS 136
G D+ SAR FD+M +N+V+WT MI+ Y+Q G ++A+ +F +L S ++FT +S
Sbjct: 194 GGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTS 253
Query: 137 ALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKD 196
L AC + + G+ + + + ++FV L+D+YAK +E++ +F + +
Sbjct: 254 LLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHN 313
Query: 197 VVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHD 256
V+SW A+I G ++ LF +M+ + P+CFT S+L+A + Q+H
Sbjct: 314 VMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHG 373
Query: 257 LIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSK 316
IKLGL + N + SLI++YA+ G++ A + + + + ++IS A+ + S
Sbjct: 374 QTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALD-SD 432
Query: 317 EAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALI 376
E+F+ ++ +G +L+ A + ++ G QIHA K + + NALI
Sbjct: 433 ESFN--HEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALI 490
Query: 377 DMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDV 436
MY+K G A + F++MG +NVI+WTS+I+G+AKHG+ +A+EL+ +M G+ PN+V
Sbjct: 491 SMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEV 550
Query: 437 TFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQ 496
T++++L ACSH GL E W+ F M + I PR EH++C+VDL R G L A I
Sbjct: 551 TYIAVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINS 610
Query: 497 MNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNA 556
M A +W LG+C ++ NT LGE AA+ + + EP Y++LSN+Y + G WD+
Sbjct: 611 MPFDADALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEGRWDDV 670
Query: 557 RKTRKLMEERSLRKNPGYSFLQ 578
RK M+++ L K GYS+++
Sbjct: 671 AALRKSMKQKKLIKETGYSWIE 692
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 156/562 (27%), Positives = 285/562 (50%), Gaps = 19/562 (3%)
Query: 7 NFKTGQLKQAL-KFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNL 65
+ K L++A+ + L+ L+ S LL+ CI L+H +I +G +
Sbjct: 18 DLKFESLRKAISRLDLTTTSPLIKSSL---LLKACIRSGNLELGKLLHHKLIDSGLPLDS 74
Query: 66 HLSTKVIIFYAKVGDVLSARKAFDRM--PERNVVSWTAMISGYAQNGYDENALLVFSAML 123
L +I Y+K GD +A F M +R++VSW+A+IS +A N + ALL F ML
Sbjct: 75 VLLNSLITLYSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHML 134
Query: 124 ---RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQK-GRFVENLFVKSALLDLYAKC 179
R+ + N++ +++ LR+C+ + G I + K G F ++ V AL+D++ K
Sbjct: 135 QCSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKG 194
Query: 180 GW-IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
G I+ A ++F++++ K++V+W MI + G DD+ LF ++ PD FTL S+
Sbjct: 195 GLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSL 254
Query: 239 LRASVGGIELMKI-SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
L A V +E + Q+H +I+ GL S + +L+D+YAK ++ ++ +++ +ML +
Sbjct: 255 LSACV-ELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHN 313
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
++S TALISG+ + +EA LF +M+ + + +L CA++ +G+Q+H
Sbjct: 314 VMSWTALISGYVQ-SRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLH 372
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
K S VGN+LI+MYA+SG + A +AF+ + +KN+IS+ + AK
Sbjct: 373 GQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALDSD 432
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
E+ +++H G+ + T+ LL + G +G ++ +I K + +
Sbjct: 433 ESFN--HEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHA-LIVKSGFGTNLCINNAL 489
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG-NTSLGELAARNLFDMEPEK 536
+ ++++ G E+A + M + + W++I+ + +G T EL L
Sbjct: 490 ISMYSKCGNKEAALQVFNDMGYRNVIT-WTSIISGFAKHGFATKALELFYEMLEIGVKPN 548
Query: 537 SVNYVVLSNIYTAAGAWDNARK 558
V Y+ + + + G D A K
Sbjct: 549 EVTYIAVLSACSHVGLIDEAWK 570
>gi|15231402|ref|NP_188004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273848|sp|Q9LRV9.1|PP228_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g13880
gi|9294611|dbj|BAB02912.1| probable selenium-binding protein [Arabidopsis thaliana]
gi|332641909|gb|AEE75430.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 748
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 192/558 (34%), Positives = 305/558 (54%), Gaps = 9/558 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD TY L FC ++ L+H ++ NG + L +I Y+K G + A
Sbjct: 146 LDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSL 205
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA---RM 144
FDR ER+ VSW ++ISGY + G E L + + M R G+ + S L+AC
Sbjct: 206 FDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNE 265
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
+++ G I K ++ V++ALLD+YAK G +++A LF + K+VV++NAMI
Sbjct: 266 GFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMI 325
Query: 205 GG-LAMQGFNDDS----FWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLII 259
G L M D++ F LF M R+G++P T +L+A L QIH LI
Sbjct: 326 SGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALIC 385
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
K +S + +LI++YA GS Q + S K DI S T++I +++ + AF
Sbjct: 386 KNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNE-QLESAF 444
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMY 379
DLF+ + + ++ + LM++ CA+ A+L+ G QI +A K +V + I MY
Sbjct: 445 DLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMY 504
Query: 380 AKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFL 439
AKSG + AN+ F E+ + +V +++++I+ A+HG +EA+ +++ MK G+ PN FL
Sbjct: 505 AKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFL 564
Query: 440 SLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
+L AC H GL +G + F M N YRI P +HF+C+VDL R G+L A N+I
Sbjct: 565 GVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGF 624
Query: 500 KPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKT 559
+ W A+L +C +Y ++ +G+ A L ++EPE S +YV+L NIY +G +A +
Sbjct: 625 QDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEV 684
Query: 560 RKLMEERSLRKNPGYSFL 577
R+LM +R ++K P S++
Sbjct: 685 RELMRDRGVKKEPALSWI 702
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 155/526 (29%), Positives = 267/526 (50%), Gaps = 26/526 (4%)
Query: 20 SLSCP-DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKV 78
SL P +T LD Y L Q + L H H+I + L+L ++ Y K
Sbjct: 36 SLCQPKNTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKC 95
Query: 79 GDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSAL 138
++ AR+ FDRMPERN++S+ ++ISGY Q G+ E A+ +F + ++ ++FTY+ AL
Sbjct: 96 RELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGAL 155
Query: 139 RACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVV 198
C L G ++ G + + +F+ + L+D+Y+KCG ++ A LF+R + +D V
Sbjct: 156 GFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQV 215
Query: 199 SWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV-----GGIELMKISQ 253
SWN++I G G ++ L M R G+ + LGS+L+A G IE K
Sbjct: 216 SWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIE--KGMA 273
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR--- 310
IH KLG+E + +L+D+YAK GS++ A +L+ M ++++ A+ISGF +
Sbjct: 274 IHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDE 333
Query: 311 -DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDA 369
D S EAF LF DM + + ++L C+ +L GRQIHA K D
Sbjct: 334 ITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDE 393
Query: 370 AVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE 429
+G+ALI++YA G D + F +++ SWTS+I + ++ A +L++++
Sbjct: 394 FIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSS 453
Query: 430 GMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV----VDLFARRG 485
+ P + T ++ AC+ G + I Y I + F+ V + ++A+ G
Sbjct: 454 HIRPEEYTVSLMMSACADFAALSSG-----EQIQGYAIKSGIDAFTSVKTSSISMYAKSG 508
Query: 486 QLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
+ A + ++ P + +SA++ + + +G+ + A N+F+
Sbjct: 509 NMPLANQVFIEVQ-NPDVATYSAMISSLAQHGSAN----EALNIFE 549
>gi|224065397|ref|XP_002301797.1| predicted protein [Populus trichocarpa]
gi|222843523|gb|EEE81070.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 191/560 (34%), Positives = 319/560 (56%), Gaps = 7/560 (1%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG-YESNLHLSTKVIIFYAKVGDVLSA 84
TL P LL C D+ Q IHA IIT G + +N + + VI YA++G + SA
Sbjct: 3 TLSWPKRLKHLLLACKDEAPVTQ---IHALIITTGLFFANSNFNGLVIASYARIGGITSA 59
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
R FD++P+R V +W AMI Y++ + L ++ M+ G + + T++ A++A + +
Sbjct: 60 RHLFDKLPQRGVDAWNAMIVAYSRRYHLTEVLNLYHQMVNEGGKPDSSTFTVAIKASSSL 119
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
+ L+ G I + ++FV S++L+LY KCG I++A ++F+++ ++DVV W MI
Sbjct: 120 KDLEAGERIWRRAVDFGYGCDVFVGSSVLNLYVKCGKIDEAKLVFDKMVKRDVVCWATMI 179
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
GL G ++ +FR M ++G++ D + +++A EL +H ++ +
Sbjct: 180 TGLVQNGNVLEAVDMFRRMRKEGIEGDGVLMLGLVQACANLGELKLGLSVHGHAVRREML 239
Query: 265 SSNK-LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
+ L SL+D+YAK G + A +++ M + + +S ALISGFA++ ++ A DL
Sbjct: 240 MDDVILQTSLVDMYAKIGDLELASRVFEQMPRKNAVSWGALISGFAQN-GFAEYALDLLV 298
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
+M + D +L L C+ V L LG+ IH + + + ++ +G ALIDMYAK G
Sbjct: 299 EMQSLEFKPDTAVLVSALLACSQVGHLKLGKSIHGYIVR-RLGFELVLGTALIDMYAKCG 357
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
++ A+ FD + ++VI W ++IA Y HG G E + L+ KMK + P+ TF SLL
Sbjct: 358 SLSCAHAIFDRVDSRDVILWNTMIASYGIHGDGKEVLSLFLKMKEANISPDHATFASLLS 417
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
A SH+G G F M+N+ +I P +H++C+VDLF+R G++E AY +I MN +P
Sbjct: 418 ALSHSGQVDVGQYWFNAMVNECKIPPSEKHYACMVDLFSRAGRVEEAYQLIESMNTEPGL 477
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
++W A+L C Y N GE+AA+ + D+ P+ Y ++SN ++ A WD RK+M
Sbjct: 478 AIWVALLSGCHNYRNLLFGEVAAKKILDLNPDDLGIYALVSNFFSLARMWDRVSILRKIM 537
Query: 564 EERSLRKNPGYSFLQSSKKN 583
+E ++K PGYS ++ + K+
Sbjct: 538 KETGMKKVPGYSAVEVNGKH 557
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 193/589 (32%), Positives = 318/589 (53%), Gaps = 38/589 (6%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYA--KVGDV 81
P LL ++LL C K+ + IH+ II G + +K+I F A G++
Sbjct: 26 PYKLLQNHPSLTLLSTC---KSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNL 82
Query: 82 LSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC 141
A F+ + + N W MI G + + A+ + ML GV N +T+ L++C
Sbjct: 83 SYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSC 142
Query: 142 ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG--------------------- 180
A++ Q G+ I G + K + FV ++L+++YA+ G
Sbjct: 143 AKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFT 202
Query: 181 ----------WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
++DA LFE I +D VSWNAMI G A G +++ F+ M R + P
Sbjct: 203 ALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAP 262
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
+ T+ ++L A L + + I GL S+ +L +LID+Y+K G + A L+
Sbjct: 263 NESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLF 322
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
+ + DIIS +I G++ +++ KEA LF+ M + +DV +L CA + +L
Sbjct: 323 EGICEKDIISWNVMIGGYSHMNSY-KEALALFRKMQQSNVEPNDVTFVSILPACAYLGAL 381
Query: 351 NLGRQIHAFA-FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
+LG+ IHA+ K+ + ++ +LIDMYAK G I A + F M K++ SW ++I+G
Sbjct: 382 DLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISG 441
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
A HG+ + A+EL+++M+ EG P+D+TF+ +L ACSH GL G + F+ M+ Y I P
Sbjct: 442 LAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISP 501
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
+ +H+ C++DL R G + A +++ M +KP ++W ++LGAC ++GN LGE AA++L
Sbjct: 502 KLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHL 561
Query: 530 FDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
F++EPE YV+LSNIY AG WD+ + R + ++ ++K PG S ++
Sbjct: 562 FELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIE 610
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 194/555 (34%), Positives = 313/555 (56%), Gaps = 13/555 (2%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ +L+ C R A +H H G ++L +ST ++ YAK A F RM
Sbjct: 131 TFPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRM 190
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P R+VV+W AM++GYA +G + + +++ N T + L A+ L GR
Sbjct: 191 PARDVVAWNAMLAGYALHGKYSDTIACL-LLMQDDHAPNASTLVALLPLLAQHGALSQGR 249
Query: 152 MIQG-SIQKGRFVEN---LFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ S++ ++ + V +ALLD+YAKCG + A +FE + ++ V+W+A++GG
Sbjct: 250 AVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGF 309
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCF----TLGSILRASVGGIELMKISQIHDLIIKLGL 263
+ G ++F LF+ M+ QG+ CF ++ S LRA +L Q+H L+ K GL
Sbjct: 310 VLCGRMLEAFSLFKDMLAQGL---CFLSPTSVASALRACANLSDLCLGKQLHALLAKSGL 366
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
+ SL+ +YAK G I A L+ M+ D +S +AL+SG+ ++ + EAF +F+
Sbjct: 367 HTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGK-ADEAFRVFR 425
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
M + D + ++ C+++A+L G+ H + + ++ NALIDMYAK G
Sbjct: 426 KMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCG 485
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
I + + FD M ++++SW ++IAGY HG G EA L+ MKH+ P+DVTF+ L+
Sbjct: 486 RIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLIS 545
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
ACSH+GL EG F M +KY I PR EH+ +VDL AR G L+ AY I+ M +K
Sbjct: 546 ACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADV 605
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
+W A+LGAC ++ N LG+ + + + PE + N+V+LSNI++AAG +D A + R +
Sbjct: 606 RVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQ 665
Query: 564 EERSLRKNPGYSFLQ 578
+E+ +K+PG S+++
Sbjct: 666 KEQGFKKSPGCSWIE 680
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 140/498 (28%), Positives = 248/498 (49%), Gaps = 18/498 (3%)
Query: 79 GDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSAL 138
GD+ AR FD++P + + A+I Y+ G L S R + N +T+ L
Sbjct: 77 GDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVL 136
Query: 139 RACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVV 198
+AC+ + L+ R + + +LFV +AL+D+YAKC A +F R+ +DVV
Sbjct: 137 KACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVV 196
Query: 199 SWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLI 258
+WNAM+ G A+ G D+ +M+ P+ TL ++L L + +H
Sbjct: 197 AWNAMLAGYALHGKYSDTIACLL-LMQDDHAPNASTLVALLPLLAQHGALSQGRAVHAYS 255
Query: 259 IK---LGLESSNKLTGS-LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH 314
++ L L G+ L+D+YAK G + A +++ +M + ++ +AL+ GF
Sbjct: 256 VRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVL-CGR 314
Query: 315 SKEAFDLFKDMILKKMG-IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN 373
EAF LFKDM+ + + + + L CAN++ L LG+Q+HA K D GN
Sbjct: 315 MLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGN 374
Query: 374 ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP 433
+L+ MYAK+G I A FD+M K+ +S+++L++GY ++G EA +++KM+ + P
Sbjct: 375 SLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQP 434
Query: 434 NDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNM 493
+ T +SL+ ACSH G +I + I + ++D++A+ G+++ + +
Sbjct: 435 DVATMVSLIPACSHLAALQHGKCGHGSVIVR-GIASETSICNALIDMYAKCGRIDLSRQI 493
Query: 494 IRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDM-----EPEKSVNYVVLSNIYT 548
M + S W+ ++ I+G LG+ A DM EP+ V ++ L + +
Sbjct: 494 FDVMPARDIVS-WNTMIAGYGIHG---LGKEATALFLDMKHQACEPD-DVTFICLISACS 548
Query: 549 AAGAWDNARKTRKLMEER 566
+G ++ +M +
Sbjct: 549 HSGLVTEGKRWFHMMAHK 566
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 137/274 (50%), Gaps = 2/274 (0%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L P++ S L+ C + +HA + +G ++L ++ YAK G + A
Sbjct: 332 FLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATT 391
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FD+M ++ VS++A++SGY QNG + A VF M V+ + T S + AC+ +
Sbjct: 392 LFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAA 451
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
LQ G+ GS+ + +AL+D+YAKCG I+ + +F+ + +D+VSWN MI G
Sbjct: 452 LQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAG 511
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLES 265
+ G ++ LF M Q +PD T ++ A S G+ H + K G+
Sbjct: 512 YGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITP 571
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDI 298
+ ++D+ A+ G + AYQ + M LK D+
Sbjct: 572 RMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADV 605
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 198/440 (45%), Gaps = 63/440 (14%)
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
CG + A LF++I + +NA+I +++G R+ +P+ +T +
Sbjct: 76 CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
L+A ++L +H + GL + ++ +L+DVYAK S R A ++R M D+
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
++ A+++G+A +S L ++ + L +L + A +L+ GR +HA
Sbjct: 196 VAWNAMLAGYALHGKYSDTIACLL--LMQDDHAPNASTLVALLPLLAQHGALSQGRAVHA 253
Query: 359 FAFKYQSSYD----AAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG 414
++ + S +D VG AL+DMYAK G + A+R F+ M +N ++W++L+ G+ G
Sbjct: 254 YSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCG 313
Query: 415 YGHEAIELYKKMKHEGMV---PNDVTFLSLLFACS--------------------HTGLT 451
EA L+K M +G+ P V S L AC+ HT LT
Sbjct: 314 RMLEAFSLFKDMLAQGLCFLSPTSVA--SALRACANLSDLCLGKQLHALLAKSGLHTDLT 371
Query: 452 C---------------EGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQ 496
+ LF M+ K + +S +V + + G+ + A+ + R+
Sbjct: 372 AGNSLLSMYAKAGLIDQATTLFDQMVVKDTV-----SYSALVSGYVQNGKADEAFRVFRK 426
Query: 497 M---NIKPTASLWSAILGACS-----IYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYT 548
M N++P + +++ ACS +G G + R + E S+ ++ ++Y
Sbjct: 427 MQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGI---ASETSICNALI-DMYA 482
Query: 549 AAGAWDNARKTRKLMEERSL 568
G D +R+ +M R +
Sbjct: 483 KCGRIDLSRQIFDVMPARDI 502
>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 196/585 (33%), Positives = 316/585 (54%), Gaps = 8/585 (1%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITN 59
I+ K G+ +L+ +T + P Y+ S+L C + IHA+++
Sbjct: 200 TIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRR 259
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G E ++ + +I FY K V + RK FD+M +N++SWT MISGY QN +D A+ +F
Sbjct: 260 GTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLF 319
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
M R G + + F +S L +C L+ GR + K + FVK+ L+D+YAK
Sbjct: 320 GEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKS 379
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
+ DA +F+ + ++V+S+NAMI G + Q ++ LF M + P T S+L
Sbjct: 380 NLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLL 439
Query: 240 --RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
AS+ +EL K QIH LIIK G+ +LIDVY+K ++ A ++ M + D
Sbjct: 440 GVSASLFALELSK--QIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKD 497
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
I+ A+ G+ + ++EA L+ + + ++ ++ +N+ASL G+Q H
Sbjct: 498 IVVWNAMFFGYTQH-LENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFH 556
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
K + V NAL+DMYAK G I +A + F+ ++V+ W S+I+ +A+HG
Sbjct: 557 NQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAE 616
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
EA+ ++++M EG+ PN VTF+++L ACSH G +G F M + I P EH++CV
Sbjct: 617 EALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPG-FGIKPGTEHYACV 675
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKS 537
V L R G+L A I +M I+P A +W ++L AC I GN LG+ AA +P+ S
Sbjct: 676 VSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDS 735
Query: 538 VNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+Y++LSNI+ + G W + +K R M+ + K PG S+++ + K
Sbjct: 736 GSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNK 780
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 153/491 (31%), Positives = 263/491 (53%), Gaps = 4/491 (0%)
Query: 21 LSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGD 80
L P+ + +LLQ I + +IH II +G +S+ L+ +I +K
Sbjct: 18 LQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDR 77
Query: 81 VLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLR-SGVRANQFTYSSALR 139
V +AR FD+MP +N+++W++M+S Y+Q GY E AL+VF + R SG N+F +S +R
Sbjct: 78 VDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIR 137
Query: 140 ACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS 199
AC ++ ++ G + G + + F ++++V ++L+D Y+K G IE+A ++F+++ K V+
Sbjct: 138 ACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVT 197
Query: 200 WNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLII 259
W +I G G + S LF M + PD + + S+L A L QIH ++
Sbjct: 198 WTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVL 257
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
+ G E + LID Y K +++ +L+ M+ +IIS T +ISG+ + ++ EA
Sbjct: 258 RRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQ-NSFDWEAM 316
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMY 379
LF +M D +L C + +L GRQ+HA+ K D V N LIDMY
Sbjct: 317 KLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMY 376
Query: 380 AKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFL 439
AKS + DA + FD M ++NVIS+ ++I GY+ EA+EL+ +M+ P+ +TF+
Sbjct: 377 AKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFV 436
Query: 440 SLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
SLL S + E + +I K+ + S ++D++++ ++ A ++ +MN
Sbjct: 437 SLL-GVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNE 495
Query: 500 KPTASLWSAIL 510
K +W+A+
Sbjct: 496 KDIV-VWNAMF 505
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 149/521 (28%), Positives = 263/521 (50%), Gaps = 34/521 (6%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
S+++ C + +H ++ +G++ ++++ T +I FY+K G++ AR FD++ E+
Sbjct: 134 SVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEK 193
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
V+WT +I+GY + G +L +F+ M + V +++ SS L AC+ + +L+GG+ I
Sbjct: 194 TAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIH 253
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND 214
+ + ++ V + L+D Y KC ++ LF+++ K+++SW MI G F+
Sbjct: 254 AYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDW 313
Query: 215 DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLI 274
++ LF M R G KPD F S+L + L + Q+H IK LES + LI
Sbjct: 314 EAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLI 373
Query: 275 DVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD 334
D+YAK + A +++ M + ++IS A+I G++ + S EA +LF +M ++
Sbjct: 374 DMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLS-EALELFHEMRVRLFPPSL 432
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE 394
+ +L + A++ +L L +QIH K+ S D G+ALID+Y+K + DA F+E
Sbjct: 433 LTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEE 492
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS-------- 446
M +K+++ W ++ GY +H EA++LY ++ PN+ TF +L+ A S
Sbjct: 493 MNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHG 552
Query: 447 ---HTGLTCEGWEL-------FTDMINKYRILPRAEH------------FSCVVDLFARR 484
H L G + DM K + A ++ ++ A+
Sbjct: 553 QQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQH 612
Query: 485 GQLESAYNMIRQM---NIKPTASLWSAILGACSIYGNTSLG 522
G+ E A M R+M I+P + A+L ACS G G
Sbjct: 613 GEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDG 653
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 148/297 (49%), Gaps = 27/297 (9%)
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
++P ++L+ S+ ++ IH II GL+S L LI+V +K + +A
Sbjct: 23 LRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNAR 82
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG--IDDVILCLMLNICA 345
++ M ++I+ ++++S +++ +S+EA +F D+ +K G ++ +L ++ C
Sbjct: 83 VVFDKMPHKNLITWSSMVSMYSQQ-GYSEEALMVFVDL-QRKSGEHPNEFVLASVIRACT 140
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
+ + G Q+H F + D VG +LID Y+K+G I +A FD++ +K ++WT+
Sbjct: 141 QLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTT 200
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS-----------HTGLTCEG 454
+IAGY K G ++EL+ +M+ +VP+ S+L ACS H + G
Sbjct: 201 IIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRG 260
Query: 455 WELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
E+ ++N ++D + + ++++ + QM +K S + I G
Sbjct: 261 TEMDVSVVN------------VLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISG 305
>gi|449438472|ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
gi|449493172|ref|XP_004159212.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
Length = 605
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 195/575 (33%), Positives = 319/575 (55%), Gaps = 11/575 (1%)
Query: 9 KTGQLKQALKF--SLSCPDTLLD-PSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNL 65
K+G L AL S+ D+ ++ P Y SLLQ CI + + HAH++ +G E++
Sbjct: 36 KSGLLNDALHLLNSIDLYDSRINKPLLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDR 95
Query: 66 HLSTKVIIFYAKVG-DVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLR 124
+ ++ Y K+G D L R+ FD + ++VVSW +MI+GY + G A+ +F ML
Sbjct: 96 FVGNSLLSLYFKLGSDSLLTRRVFDGLFVKDVVSWASMITGYVREGKSGIAIELFWDMLD 155
Query: 125 SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIED 184
SG+ N FT S+ ++AC+ + L G+ G + + F N + S+L+D+Y + D
Sbjct: 156 SGIEPNGFTLSAVIKACSEIGNLVLGKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSD 215
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR-QGMKPDCFTLGSILRASV 243
A LF+ + D V W +I +++ F R + PD +T GS+L A
Sbjct: 216 ARQLFDELLEPDPVCWTTVISAFTRNDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACG 275
Query: 244 GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTA 303
L + +IH +I G + SL+D+Y K G++ + +L+ M + +S +A
Sbjct: 276 NLGRLRQGEEIHAKVIAYGFSGNVVTESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSA 335
Query: 304 LISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY 363
L++ + + ++ K A +LF++M +D ++ CA +A++ G++IH +
Sbjct: 336 LLAVYCHNGDYEK-AVNLFREM----KEVDLYSFGTVIRACAGLAAVTPGKEIHCQYIRK 390
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELY 423
D V +AL+D+YAK G I A R FD M +N+I+W S+I G+A++G AI+++
Sbjct: 391 GGWRDVIVESALVDLYAKCGCINFAYRVFDRMPTRNLITWNSMIHGFAQNGSSGIAIQIF 450
Query: 424 KKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFAR 483
+ M EG+ P+ ++F+ LLFACSHTGL + F M KY I P EH++C+VDL R
Sbjct: 451 EAMIKEGIKPDCISFIGLLFACSHTGLVDQARHYFDLMTGKYGIKPGVEHYNCMVDLLGR 510
Query: 484 RGQLESAYNMIRQMNIKPTASLWSAILGACSIY-GNTSLGELAARNLFDMEPEKSVNYVV 542
G LE A N+I + +SLW +LGAC+ N++ E A+ L ++EP+ ++YV
Sbjct: 511 AGLLEEAENLIENAECRNDSSLWLVLLGACTTTCTNSATAERIAKKLMELEPQCYLSYVH 570
Query: 543 LSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
L+N+Y A G WD+A K R+LM+ R L+K PG S++
Sbjct: 571 LANVYRAVGRWDDAVKVRELMKNRQLKKMPGQSWM 605
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 197/580 (33%), Positives = 314/580 (54%), Gaps = 4/580 (0%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITN 59
I+RA G A+ S + P+ TY +L+ C A IH+H
Sbjct: 79 QIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMF 138
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G ES++ + T ++ FYAK G ++ A++ F M R+VV+W AMI+G + G ++A+ +
Sbjct: 139 GLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLI 198
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
M G+ N T L + L G+ + G + F + V + LLD+YAKC
Sbjct: 199 MQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKC 258
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM-MRQGMKPDCFTLGSI 238
+ A +F+ + ++ VSW+AMIGG ++ LF M ++ M P TLGS+
Sbjct: 259 QCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSV 318
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
LRA +L + ++H IIKLG L +L+ +YAK G I A + + M D
Sbjct: 319 LRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDS 378
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
+S +A++SG ++ N + A +F+ M L + D + +L C+++A+L G H
Sbjct: 379 VSFSAIVSGCVQNGN-AAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHG 437
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHE 418
+ + D + NALIDMY+K G+I+ A F+ M +++SW ++I GY HG G E
Sbjct: 438 YLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGME 497
Query: 419 AIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVV 478
A+ L+ + G+ P+D+TF+ LL +CSH+GL EG F M + I+PR EH C+V
Sbjct: 498 ALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMV 557
Query: 479 DLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSV 538
D+ R G ++ A++ IR M +P +WSA+L AC I+ N LGE ++ + + PE +
Sbjct: 558 DILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTG 617
Query: 539 NYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
N+V+LSNIY+AAG WD+A R ++ L+K PG S+++
Sbjct: 618 NFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIE 657
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 148/493 (30%), Positives = 256/493 (51%), Gaps = 14/493 (2%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
+ Y+ LL+ CI K+ +A IH H + N ++ + K+ Y V+ AR+ FD
Sbjct: 9 NNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDE 68
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+P +V+ W +I YA NG + A+ ++ +ML GVR N++TY L+AC+ + ++ G
Sbjct: 69 IPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
I + ++FV +AL+D YAKCG + +A LF + +DVV+WNAMI G ++
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLY 188
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
G DD+ L M +G+ P+ T+ +L L +H ++ ++ +
Sbjct: 189 GLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVG 248
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK- 329
L+D+YAK + A +++ M + +S +A+I G+ D KEA +LF MILK
Sbjct: 249 TGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDC-MKEALELFDQMILKDA 307
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
M V L +L CA + L+ GR++H + K D +GN L+ MYAK G I DA
Sbjct: 308 MDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAI 367
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT- 448
R FD M K+ +S++++++G ++G A+ +++ M+ G+ P+ T L +L ACSH
Sbjct: 368 RFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLA 427
Query: 449 ----GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
G G+ + I + ++D++++ G++ A + +M+ S
Sbjct: 428 ALQHGFCSHGYLIVRGFATDTLIC------NALIDMYSKCGKISFAREVFNRMDRHDIVS 481
Query: 505 LWSAILGACSIYG 517
W+A++ I+G
Sbjct: 482 -WNAMIIGYGIHG 493
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 192/613 (31%), Positives = 319/613 (52%), Gaps = 74/613 (12%)
Query: 48 QAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF---DRMPERNVVSWTAMIS 104
QA HA I+ S+ L+T ++ FYA + + + + +P + S++++I
Sbjct: 18 QARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSSLIH 77
Query: 105 GYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVE 164
+A++ + + L FS + + + F SA+++CA +R L G+ + F+
Sbjct: 78 AFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLT 137
Query: 165 NLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI-------------------- 204
+ V S+L +Y KC I DA LF+R+ +DVV W+AMI
Sbjct: 138 DSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMR 197
Query: 205 ---------------GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELM 249
G GF D++ +FR M+ QG PD T+ +L A VG +E +
Sbjct: 198 SGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPA-VGCLEDV 256
Query: 250 KI-SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGF 308
+ +Q+H +IK GL S + +++D+Y K G ++ +++ + + +I S A ++G
Sbjct: 257 VVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGL 316
Query: 309 ARD----------------------------------DNHSKEAFDLFKDMILKKMGIDD 334
+R+ + EA +LF+DM + +
Sbjct: 317 SRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNA 376
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE 394
V + ++ C N+++L G++IH F+ + D VG+ALIDMYAK G I A R FD+
Sbjct: 377 VTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDK 436
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG 454
M N++SW +++ GYA HG E +E++ M G P+ VTF +L AC+ GLT EG
Sbjct: 437 MSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEG 496
Query: 455 WELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACS 514
W + M ++ I P+ EH++C+V L +R G+LE AY++I++M +P A +W A+L +C
Sbjct: 497 WRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCR 556
Query: 515 IYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGY 574
++ N SLGE+AA LF +EP NY++LSNIY + G WD + R++M+ + LRKNPGY
Sbjct: 557 VHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLRKNPGY 616
Query: 575 SFLQSSKKNILLL 587
S+++ K +LL
Sbjct: 617 SWIEVGHKVHMLL 629
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/462 (24%), Positives = 197/462 (42%), Gaps = 77/462 (16%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS 83
PD L PS S C +A +HA +G+ ++ +++ + Y K +L
Sbjct: 102 PDAFLLPSAIKS----CASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILD 157
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA- 142
ARK FDRMP+R+VV W+AMI+GY++ G E A +F M GV N +++ L
Sbjct: 158 ARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGN 217
Query: 143 -----------RMRWLQG-----------------------GRMIQGSIQKGRFVENLFV 168
RM +QG G + G + K + FV
Sbjct: 218 NGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFV 277
Query: 169 KSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND-------------- 214
SA+LD+Y KCG +++ +F+ +E ++ S NA + GL+ G D
Sbjct: 278 VSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKM 337
Query: 215 ---------------------DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ 253
++ LFR M G++P+ T+ S++ A LM +
Sbjct: 338 ELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKE 397
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN 313
IH ++ G+ + +LID+YAK G I+ A + + M +++S A++ G+A
Sbjct: 398 IHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGK 457
Query: 314 HSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDAAVG 372
+KE ++F M+ D V +L+ CA G R ++ + ++
Sbjct: 458 -AKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHY 516
Query: 373 NALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKH 413
L+ + ++ G++ +A EM + + W +L++ H
Sbjct: 517 ACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVH 558
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 121/234 (51%), Gaps = 5/234 (2%)
Query: 248 LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRS---AYQLYRSMLKTDIISCTAL 304
L + Q H LI++L L S +LT SL+ YA S+ + + L + + S ++L
Sbjct: 16 LSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSSL 75
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
I FAR +H F + ++ D +L + CA++ +L+ G+Q+HAFA
Sbjct: 76 IHAFARS-HHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASG 134
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
D+ V ++L MY K I DA + FD M D++V+ W+++IAGY++ G EA EL+
Sbjct: 135 FLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFG 194
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVV 478
+M+ G+ PN V++ +L + G E +F M+ + P SCV+
Sbjct: 195 EMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQ-GFWPDGSTVSCVL 247
>gi|224090525|ref|XP_002309013.1| predicted protein [Populus trichocarpa]
gi|222854989|gb|EEE92536.1| predicted protein [Populus trichocarpa]
Length = 583
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 192/550 (34%), Positives = 297/550 (54%), Gaps = 5/550 (0%)
Query: 30 PSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFD 89
P SL+ C KA RQ +HA I S++ +S ++ YAK + AR+ FD
Sbjct: 3 PELVGSLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFD 62
Query: 90 RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG 149
M ERN+VSW+AMISGY Q G +AL +FS + + N++ Y+S + ACA ++ L
Sbjct: 63 EMSERNLVSWSAMISGYEQIGEPISALGLFSKL---NIVPNEYVYASVISACASLKGLVQ 119
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
G+ I G K FV +AL+ +Y KCG DA + + + V++NA+I G
Sbjct: 120 GKQIHGQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVE 179
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
D F + R M + G PD FT +L +L + +H IKL L S+ +
Sbjct: 180 NQQPDKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFI 239
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK- 328
+I +Y+K + A + +RS+ + D+IS IS + ++H K A + FK+M+ +
Sbjct: 240 GNLIITMYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEK-ALEAFKEMLNEC 298
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
++ D+ L C+ +AS+ G+QIH + + D GNALI+MYAK G IA A
Sbjct: 299 RVRPDEFTFASALAACSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKA 358
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
F +M +N++SW ++IAG+ HG+G +A EL+ KMK G+ P+ VTF+ LL A +H
Sbjct: 359 YYIFSKMEHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTASNHA 418
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
GL EG F M Y I P EHFSC++DL R G+L A +++ + +
Sbjct: 419 GLVDEGLVYFNSMEETYGISPEIEHFSCLIDLLGRAGRLNEAKEYMKKFPFGHDTVVLGS 478
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L AC ++G+ G+ AR L ++P + YV+LSN+Y + WD + KL++ L
Sbjct: 479 LLSACRLHGDVDTGKCFARQLLKLQPATTSPYVLLSNLYASDEMWDGVAEAWKLLKGSGL 538
Query: 569 RKNPGYSFLQ 578
+K PG+S ++
Sbjct: 539 KKEPGHSLIE 548
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/453 (24%), Positives = 184/453 (40%), Gaps = 68/453 (15%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
Y S++ C K Q IH + G +S +S +I Y K G A A++
Sbjct: 103 VYASVISACASLKGLVQGKQIHGQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEA 162
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
E N V++ A+I+G+ +N + V M + G ++FT+ L C L+ G
Sbjct: 163 LELNPVAYNALITGFVENQQPDKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGE 222
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
++ K + F+ + ++ +Y+K +E+A F IE KD++SWN I +
Sbjct: 223 LLHCQTIKLKLNSTAFIGNLIITMYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCN 282
Query: 212 FNDDSFWLFRSMMRQG-MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
++ + F+ M+ + ++PD FT S L A G + QIH +I+ L
Sbjct: 283 DHEKALEAFKEMLNECRVRPDEFTFASALAACSGLASMCNGKQIHGHLIRTRLYQDVGAG 342
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHS--KEAFDLFKDMILK 328
+LI++YAK G I AY ++ M +++S +I+GF NH +AF+LF M K
Sbjct: 343 NALINMYAKCGCIAKAYYIFSKMEHQNLVSWNTMIAGFG---NHGFGGKAFELFAKM--K 397
Query: 329 KMGI-DDVILCLMLNICANVASLN-----------------------------LGR---- 354
MG+ D + + L +N A L LGR
Sbjct: 398 TMGVKPDSVTFVGLLTASNHAGLVDEGLVYFNSMEETYGISPEIEHFSCLIDLLGRAGRL 457
Query: 355 -QIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAF--------------------- 392
+ + K+ +D V +L+ G++ D + F
Sbjct: 458 NEAKEYMKKFPFGHDTVVLGSLLSACRLHGDV-DTGKCFARQLLKLQPATTSPYVLLSNL 516
Query: 393 ---DEMGDKNVISWTSLIAGYAKHGYGHEAIEL 422
DEM D +W L K GH IE+
Sbjct: 517 YASDEMWDGVAEAWKLLKGSGLKKEPGHSLIEV 549
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 91/217 (41%), Gaps = 3/217 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ S L C + IH H+I ++ +I YAK G + A F
Sbjct: 303 DEFTFASALAACSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAYYIF 362
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+M +N+VSW MI+G+ +G+ A +F+ M GV+ + T+ L A +
Sbjct: 363 SKMEHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTASNHAGLVD 422
Query: 149 GGRMIQGSIQKGRFVENLFVK-SALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGG 206
G + S+++ + S L+DL + G + +A ++ D V +++
Sbjct: 423 EGLVYFNSMEETYGISPEIEHFSCLIDLLGRAGRLNEAKEYMKKFPFGHDTVVLGSLLSA 482
Query: 207 LAMQGFNDDSFWLFRSMMR-QGMKPDCFTLGSILRAS 242
+ G D R +++ Q + L S L AS
Sbjct: 483 CRLHGDVDTGKCFARQLLKLQPATTSPYVLLSNLYAS 519
>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 188/551 (34%), Positives = 308/551 (55%), Gaps = 4/551 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ +L+ C D R+ +H ++ G+ES++ + ++ FY G + A + F
Sbjct: 40 DDHTFPFVLKACADAFEVRKGREVHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVF 99
Query: 89 DRMPERNVVSWTAMISGYAQNGYD-ENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
D MPE+++VSW MI ++ NG+ +AL +F M+ G++ N T SS L + +
Sbjct: 100 DEMPEKDLVSWNTMIGVFSVNGWHYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFF 159
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ GR + GS + ++F+ ++L+D+YAK G +A +F +++ K+VVSWNAMI
Sbjct: 160 KAGREVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANF 219
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A F + L R M G P+ T ++L A + +IH I +G
Sbjct: 220 AQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDL 279
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
++ +L D+YAK G ++ A ++ + L+ D +S LI G ++ + S E+ LF +M L
Sbjct: 280 FVSNALTDMYAKSGHLKLARNVFDTSLR-DEVSYNILIVGHSQTSDCS-ESLSLFSEMQL 337
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ D+V L+ CAN+ ++ G++IH F + V N+L+D Y K G I
Sbjct: 338 MGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGL 397
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A FD M +K+V SW ++I GY G AI+L++ M+ + + + V+F+++L ACSH
Sbjct: 398 ARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSH 457
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
GL +G + F D + I P H++C+VDL R G +E A +I+ + I P A++W
Sbjct: 458 GGLLEKGRKYF-DELKARGIEPTQMHYACMVDLLGRAGLMEEAAELIKGLPIVPDANIWG 516
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
A+LGAC IYGN L AA +LF+++PE S Y +LSN+Y G WD A + R+LM+ R
Sbjct: 517 ALLGACRIYGNLELAAWAAEHLFELKPEHSGYYTLLSNMYAETGRWDEANRIRELMKSRG 576
Query: 568 LRKNPGYSFLQ 578
++K+PG S++Q
Sbjct: 577 VKKSPGCSWVQ 587
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 149/483 (30%), Positives = 251/483 (51%), Gaps = 30/483 (6%)
Query: 99 WTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQ 158
W +I GY+ G L V++ M+R GVR + T+ L+ACA ++ GR + GS+
Sbjct: 10 WNTLIRGYSIAGVG-GGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVV 68
Query: 159 KGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN-DDSF 217
K F ++FV + LL Y CG + DA +F+ + KD+VSWN MIG ++ G++ D+
Sbjct: 69 KLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDAL 128
Query: 218 WLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLGLESSNKLTGSLIDV 276
+FR M+ +G+KP+ T+ S L V +E K ++H I++GLES + SLID+
Sbjct: 129 DMFRLMIDEGLKPNSITISSFLPVLV-ELEFFKAGREVHGSSIRMGLESDIFIANSLIDM 187
Query: 277 YAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG----- 331
YAK G A ++ + +++S A+I+ FA++ F+L ++++M
Sbjct: 188 YAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQN------RFELVAVGLVRQMQDYGEL 241
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
+ V +L CA + + G++IHA + ++D V NAL DMYAKSG + A
Sbjct: 242 PNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNV 301
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLT 451
FD ++ +S+ LI G+++ E++ L+ +M+ G+ ++V+F+ L AC++
Sbjct: 302 FD-TSLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAI 360
Query: 452 CEGWELFTDMINKYRILPRAEHF--SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
+G E+ ++ K L F + ++D + + G++ A N+ +M K AS + I
Sbjct: 361 KQGKEIHGFLLRK---LFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMI 417
Query: 510 LGACSIYGNTSLGEL-AARNLFDMEPEKSVNY--VVLSNIYTAAGAWDNARKTRKLMEER 566
LG YG LGEL A +LF+ + V Y V + +A K RK +E
Sbjct: 418 LG----YG--MLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDEL 471
Query: 567 SLR 569
R
Sbjct: 472 KAR 474
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 190/585 (32%), Positives = 326/585 (55%), Gaps = 8/585 (1%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPSTY--MSLLQFCIDKKAERQAHLIHAHIITN 59
+++ A GQ +AL+ L P+TY ++ LQ C D +Q IHA ++ +
Sbjct: 288 SMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKS 347
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
Y N+ ++ +I YA+ G + A F M + + +SW +M+SG+ QNG AL +
Sbjct: 348 SYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFY 407
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
M +G + + S + A AR G I K +L V ++L+D+YAK
Sbjct: 408 HEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKF 467
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
++ +F+++ KDVVSW +I G A G + + LFR + +G+ D + SIL
Sbjct: 468 CSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSIL 527
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
A G + + +IH II+ GL S L ++DVY + G++ A +++ + D++
Sbjct: 528 LACSGLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVV 586
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGI--DDVILCLMLNICANVASLNLGRQIH 357
S T++IS + + + EA +LF ++K+ G+ D + L +L+ A++++L G++IH
Sbjct: 587 SWTSMISCYVHN-GLANEALELFH--LMKETGVEPDSISLVSILSAAASLSALKKGKEIH 643
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
F + + ++ + L+DMYA+ G + + F+ + +K+++ WTS+I Y HG G
Sbjct: 644 GFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGR 703
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
AI+L+++M+ E + P+ + F+++L+ACSH+GL EG M +Y++ P EH+ C+
Sbjct: 704 AAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCL 763
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKS 537
VDL R LE AY ++ M ++PTA +W A+LGAC I+ N LGE+AA+ L +M+PE
Sbjct: 764 VDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENP 823
Query: 538 VNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
NYV++SN+Y A W + + R M+ L+KNPG S+++ K
Sbjct: 824 GNYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEVGNK 868
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 160/515 (31%), Positives = 289/515 (56%), Gaps = 15/515 (2%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD T+ +L+ C K R +H I GY S + ++ ++ Y K D+ AR+
Sbjct: 214 LDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQL 273
Query: 88 FDRMPER-NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FDRMPE+ +VVSW +MIS Y+ NG AL +F M ++ + N +T+ +AL+AC +
Sbjct: 274 FDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSF 333
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
++ G I ++ K + N+FV +AL+ +YA+ G + +A +F ++ D +SWN+M+ G
Sbjct: 334 IKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSG 393
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
G ++ + M G KPD + SI+ AS + QIH +K GL+S
Sbjct: 394 FVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSD 453
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
++ SL+D+YAK+ S++ ++ M D++S T +I+G A++ +HS+ A +LF+++
Sbjct: 454 LQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSR-ALELFREVQ 512
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
L+ + +D +++ +L C+ + ++ ++IH++ + S D + N ++D+Y + G +
Sbjct: 513 LEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGECGNVD 571
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A R F+ + K+V+SWTS+I+ Y +G +EA+EL+ MK G+ P+ ++ +S+L A +
Sbjct: 572 YAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAA 631
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA---YNMIRQMNIKPTA 503
+G E+ +I K +L S +VD++AR G LE + +N IR ++
Sbjct: 632 SLSALKKGKEIHGFLIRKGFVL-EGSLASTLVDMYARCGTLEKSRNVFNFIRNKDL---- 686
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSV 538
LW++++ A YG G AA +LF ++S+
Sbjct: 687 VLWTSMINA---YGMHGCGR-AAIDLFRRMEDESI 717
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 162/544 (29%), Positives = 284/544 (52%), Gaps = 19/544 (3%)
Query: 4 VRANFKTGQLKQALK-----FSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIIT 58
+R K G + +A + F+ P Y S+L+ C KKA + +HAH+IT
Sbjct: 83 LREICKRGSVNEAFQSLTDLFANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMIT 142
Query: 59 -NGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALL 117
N +++ LST+++ Y K G ++ A K FD MP + + +W AMI Y NG +L
Sbjct: 143 SNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLE 202
Query: 118 VFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYA 177
++ M SG+ + T+ L+AC ++ + G + G K +V +FV ++++ +Y
Sbjct: 203 LYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYT 262
Query: 178 KCGWIEDAWILFERI-ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLG 236
KC + A LF+R+ E++DVVSWN+MI + G + ++ LF M + + P+ +T
Sbjct: 263 KCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFV 322
Query: 237 SILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT 296
+ L+A + + IH ++K + + +LI +YA++G + A ++ +M
Sbjct: 323 AALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDW 382
Query: 297 DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNL--GR 354
D IS +++SGF ++ + EA + +M + G ++ ++ I A+ S N G
Sbjct: 383 DTISWNSMLSGFVQNGLY-HEALQFYHEM--RDAGQKPDLVAVISIIAASARSGNTLNGM 439
Query: 355 QIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG 414
QIHA+A K D VGN+L+DMYAK + + FD+M DK+V+SWT++IAG+A++G
Sbjct: 440 QIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNG 499
Query: 415 YGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF 474
A+EL+++++ EG+ + + S+L ACS L E+ + +I K L
Sbjct: 500 SHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKG--LSDLVLQ 557
Query: 475 SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEP 534
+ +VD++ G ++ A M + K S W++++ S Y + L A LF +
Sbjct: 558 NGIVDVYGECGNVDYAARMFELIEFKDVVS-WTSMI---SCYVHNGLAN-EALELFHLMK 612
Query: 535 EKSV 538
E V
Sbjct: 613 ETGV 616
>gi|297842209|ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
lyrata]
gi|297334827|gb|EFH65245.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
lyrata]
Length = 717
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 179/551 (32%), Positives = 305/551 (55%), Gaps = 9/551 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
++ T S++ C +A +HA + +G+ + ++ +I +K GD+ + +
Sbjct: 171 INSCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERV 230
Query: 88 F---DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
F D + +N+V+ M++ ++QN A+ +F+ ML+ G+ ++F+ S L +
Sbjct: 231 FEDLDDIRRQNIVN--VMVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSV---L 285
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
L G+ + K + +L V S+L +Y+KCG +E+++ LF+ I KD W +MI
Sbjct: 286 DCLNLGKQVHSYTLKSGLILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMI 345
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G G+ ++ LF M+ +G PD TL ++L L + +IH ++ G++
Sbjct: 346 SGFNEYGYLREAIGLFSEMLDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGID 405
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
L +L++ Y+K GS++ A ++Y + + D +SC++LISG+++ ++ F LF+D
Sbjct: 406 RGMPLGSALVNTYSKCGSLKLARKVYDRLPEMDPVSCSSLISGYSQH-GLVQDGFLLFRD 464
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M++ +D + +L LG Q+HA+ K + +VG++L+ MY+K G
Sbjct: 465 MVMSGFSMDSYAISSILKAAVLSEESELGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGS 524
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
I D +AF ++ ++I+WT+LIA YA+HG +EA+++Y MK +G P+ VTF+ +L A
Sbjct: 525 IEDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYCLMKEKGFKPDKVTFVGVLSA 584
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
CSH GL EG+ M+ Y I P H+ C+VD R G+L A N I IKP A
Sbjct: 585 CSHGGLVEEGYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAENFINTRPIKPDAL 644
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
+W +L AC IYG+ LG+LAA+ ++EP + YV LSNI G WD +TRKLM+
Sbjct: 645 VWGTLLAACKIYGDVELGKLAAKKAIELEPSDAGAYVSLSNILAEVGEWDEVEETRKLMK 704
Query: 565 ERSLRKNPGYS 575
++K PG+S
Sbjct: 705 GTGVQKEPGWS 715
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 135/495 (27%), Positives = 247/495 (49%), Gaps = 18/495 (3%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY S+L C + R ++ A +I G E ++ + T ++ YAK G + AR+ F
Sbjct: 72 DSYTYSSVLAACASLEELRFGKVVQARVIKCGAE-DVFVCTSIVDLYAKCGHMAEAREVF 130
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
R+ +VVSWT M+SGY ++ +AL +F M SGV N T +S + AC R +
Sbjct: 131 SRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGRPSMVC 190
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE---RIERKDVVSWNAMIG 205
+ + K F + V +AL+ + +K G I + +FE I R+++V N M+
Sbjct: 191 EASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIV--NVMVT 248
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
+ + LF M+++G+ PD F++ S+L + + L K Q+H +K GL
Sbjct: 249 SFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSV-LDCLNLGK--QVHSYTLKSGLIL 305
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ SL +Y+K GS+ +Y L++ + D ++ISGF + + +EA LF +M
Sbjct: 306 DLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGF-NEYGYLREAIGLFSEM 364
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ + D+ L +L +C+++ SL ++IH + + +G+AL++ Y+K G +
Sbjct: 365 LDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLGSALVNTYSKCGSL 424
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A + +D + + + +S +SLI+GY++HG + L++ M G + S+L A
Sbjct: 425 KLARKVYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAISSILKA- 483
Query: 446 SHTGLTCEGWELFTDM---INKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
+ E EL + I K + S ++ ++++ G +E Q+N P
Sbjct: 484 ---AVLSEESELGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKAFSQIN-GPD 539
Query: 503 ASLWSAILGACSIYG 517
W+A++ + + +G
Sbjct: 540 LIAWTALIASYAQHG 554
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 220/433 (50%), Gaps = 18/433 (4%)
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
A K F NV W +I+G +N +F M + + +TYSS L ACA
Sbjct: 26 AYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCNGFQKPDSYTYSSVLAACAS 85
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
+ L+ G+++Q + K E++FV ++++DLYAKCG + +A +F RI VVSW M
Sbjct: 86 LEELRFGKVVQARVIKCG-AEDVFVCTSIVDLYAKCGHMAEAREVFSRISNPSVVSWTVM 144
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGL 263
+ G + +FR M G++ + T+ S++ A + + SQ+H + K G
Sbjct: 145 LSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGRPSMVCEASQVHAWVFKSGF 204
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSM---LKTDIISCTALISGFARDDNHSKEAFD 320
+ +LI + +K G I + +++ + + +I++ +++ F+++ K A
Sbjct: 205 YLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIVN--VMVTSFSQNKKPGK-AIR 261
Query: 321 LFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYA 380
LF M+ + + D+ +C +L++ + LNLG+Q+H++ K D VG++L MY+
Sbjct: 262 LFTRMLQEGLNPDEFSVCSLLSV---LDCLNLGKQVHSYTLKSGLILDLTVGSSLFTMYS 318
Query: 381 KSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
K G + ++ F E+ K+ W S+I+G+ ++GY EAI L+ +M EG P++ T +
Sbjct: 319 KCGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDEGTSPDESTLAA 378
Query: 441 LLFACSHTGLTCEGWEL--FTDMINKYRILPRAEHFSCVVDLFARRGQLESA---YNMIR 495
+L CS E+ +T R +P S +V+ +++ G L+ A Y+ +
Sbjct: 379 VLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLG---SALVNTYSKCGSLKLARKVYDRLP 435
Query: 496 QMNIKPTASLWSA 508
+M+ +SL S
Sbjct: 436 EMDPVSCSSLISG 448
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 179/355 (50%), Gaps = 16/355 (4%)
Query: 168 VKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
V+S+L+D ++K EDA+ +F +V WN +I G F LF M
Sbjct: 9 VQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCNGF 68
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
KPD +T S+L A EL + +IK G E T S++D+YAK G + A
Sbjct: 69 QKPDSYTYSSVLAACASLEELRFGKVVQARVIKCGAEDVFVCT-SIVDLYAKCGHMAEAR 127
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
+++ + ++S T ++SG+ + N + A ++F++M + I+ + +++ C
Sbjct: 128 EVFSRISNPSVVSWTVMLSGYTK-SNDAFSALEIFREMRHSGVEINSCTVTSVISACGRP 186
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD---KNVISWT 404
+ + Q+HA+ FK D +V ALI M +KSG+I + R F+++ D +N+++
Sbjct: 187 SMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIVN-- 244
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL--FACSHTGLTCEGWELFTDMI 462
++ ++++ +AI L+ +M EG+ P++ + SLL C + G + L + +I
Sbjct: 245 VMVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSVLDCLNLGKQVHSYTLKSGLI 304
Query: 463 NKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
+ S + ++++ G LE +Y++ +++ K A W++++ + YG
Sbjct: 305 LDLTV------GSSLFTMYSKCGSLEESYSLFQEIPFKDNA-CWASMISGFNEYG 352
>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 197/627 (31%), Positives = 327/627 (52%), Gaps = 81/627 (12%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
+ LLQ C +Q IH+ II G + L+ +V+ YA G V A++ F+ P
Sbjct: 875 FNDLLQQCSKSHLSQQ---IHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSP 931
Query: 93 ER---NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG 149
N++ W +++ +GY E AL ++ M + GV A+ FT+ +RACA M +
Sbjct: 932 IECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKL 991
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
R + G + + F NL V + L+ +Y K G ++DA +FER+ + VSWN M+ G A+
Sbjct: 992 CRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYAL 1051
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSIL--RASVGG-IELMKI--------------- 251
+ +FR M G++P+ T S+L A G +E M++
Sbjct: 1052 NYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEA 1111
Query: 252 -----------------SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY---- 290
IH ++K G E+ + SLI +Y K+G++ +A L+
Sbjct: 1112 LAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIK 1171
Query: 291 -----------------------------------RSMLKTDIISCTALISGFARDDNHS 315
M++ +++S +A+I GFA
Sbjct: 1172 TKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFA-SKGQG 1230
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNAL 375
+EA +LF+ M L K+ + V + +L++CA +A+L+LGR+IH + + VGN L
Sbjct: 1231 EEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGL 1290
Query: 376 IDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND 435
I+MY KSG + N F+++ +K++ISW +++AGY HG G AI + +M +G P+
Sbjct: 1291 INMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDG 1350
Query: 436 VTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIR 495
VTF+++L ACSH GL EG ELF MI ++R+ P+ EH++C+VDL R G L+ A +++
Sbjct: 1351 VTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVK 1410
Query: 496 QMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDN 555
M ++P A +W A+L +C ++ NT + E A +F++ E + +Y++LSNIY A+G W++
Sbjct: 1411 SMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWED 1470
Query: 556 ARKTRKLMEERSLRKNPGYSFLQSSKK 582
+ K R + + L+K PG S++Q KK
Sbjct: 1471 SAKVRISAKTKGLKKTPGQSWIQVKKK 1497
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 126/495 (25%), Positives = 214/495 (43%), Gaps = 101/495 (20%)
Query: 2 NIVRANFKTGQLKQAL-------KFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHA 54
+I+RAN G ++AL K +S D T+ +++ C + + +H
Sbjct: 943 SILRANVAHGYCEEALEIYCRMRKLGVSA-----DGFTFPLVIRACALMGSRKLCRSVHG 997
Query: 55 HIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYD-- 112
H++ G++ NLH+ +++ Y K+G + ARK F+RM R+ VSW M+SGYA N YD
Sbjct: 998 HVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALN-YDCH 1056
Query: 113 --------------ENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG--------- 149
E L+ ++++L S R Q + L RMR +
Sbjct: 1057 GASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVL 1116
Query: 150 -----------GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVV 198
G++I G + KG F LFVK++L+ LY K G + A ILF I+ K++V
Sbjct: 1117 SVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIV 1176
Query: 199 SWNAM---------------------------------------IGGLAMQGFNDDSFWL 219
SWNA+ IGG A +G +++ L
Sbjct: 1177 SWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALEL 1236
Query: 220 FRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS-LIDVYA 278
FR M +K + T+ S+L L +IH +++ L N L G+ LI++Y
Sbjct: 1237 FRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVR-SLMDGNILVGNGLINMYT 1295
Query: 279 KYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILC 338
K GS + ++ + D+IS +++G+ + A F MI D V
Sbjct: 1296 KSGSFKEGNLVFEKIENKDLISWNTMVAGYGI-HGLGENAIRTFDQMIKDGFEPDGVTFV 1354
Query: 339 LMLNICANVASLNLGRQ-----IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFD 393
+L+ C++ + GR+ I F + Q + A ++D+ ++G + +A++
Sbjct: 1355 AVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYA----CMVDLLGRAGLLQEASKVVK 1410
Query: 394 EMG-DKNVISWTSLI 407
M + N W +L+
Sbjct: 1411 SMPVEPNACVWGALL 1425
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 181/551 (32%), Positives = 304/551 (55%), Gaps = 3/551 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
++ T +++LQ C + +HA ++ G E N+ + +++ YAK G V SA +
Sbjct: 265 MNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQCNA-LLVMYAKYGRVDSALRV 323
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F ++ E++ +SW +M+S Y QN + A+ F ML+ G + + S A + L
Sbjct: 324 FGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRL 383
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
GR K R +L V + L+D+Y KCG IE + +FE + +D +SW ++
Sbjct: 384 NNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACF 443
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A + ++ + + ++G+ D +GSIL G + + Q+H I+ GL
Sbjct: 444 AQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGLLDL- 502
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
L LID+Y + G + L++ + K DI+S T++I+ + + F LF +M
Sbjct: 503 ILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVF-LFTEMQK 561
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ D V L +L A ++SL G+Q+H F + + V ++L+DMY+ G +
Sbjct: 562 ANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNY 621
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A R F+ K+V+ WT++I HG+G +AI+L+K+M G+ P+ V+FL+LL+ACSH
Sbjct: 622 AIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALLYACSH 681
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
+ L EG M++KYR+ P EH++CVVD+ R GQ E AY I+ M + P +++W
Sbjct: 682 SKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIKTMPMDPKSAVWC 741
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
A+LGAC ++ N L +AA L ++EP+ NY+++SN++ G W+NA++TR M ER
Sbjct: 742 ALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMGKWNNAKETRTRMAERG 801
Query: 568 LRKNPGYSFLQ 578
LRKNP S+++
Sbjct: 802 LRKNPACSWIE 812
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 147/531 (27%), Positives = 270/531 (50%), Gaps = 43/531 (8%)
Query: 9 KTGQLKQALK-FSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGY---ESN 64
K G L+QAL+ + P Y +L ++A + +HAH +T G + +
Sbjct: 38 KEGDLRQALRQLTTRAPPA---REHYGWVLDLVAARRAAAEGRQVHAHAVTTGSLNEDDD 94
Query: 65 LHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLR 124
L+TK++ Y + G V AR+ F+ MP R V SW A++ Y +G A+ V+ AM
Sbjct: 95 GFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRA 154
Query: 125 S---GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
S G + T +S L+AC + G + G K ++ V +AL+ +YAKCG
Sbjct: 155 SAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGL 214
Query: 182 IEDAWILFERIER--KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
++ A +FE +++ +DV SWN+++ G G ++ LFR M G + +T ++L
Sbjct: 215 LDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVL 274
Query: 240 R--ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
+ A +G + L + ++H ++K G E N +L+ +YAKYG + SA +++ + + D
Sbjct: 275 QVCAELGLLSLGR--ELHAALLKCGSE-LNIQCNALLVMYAKYGRVDSALRVFGQIAEKD 331
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
IS +++S + ++ ++ EA D F +M+ D + + + +++ LN GR+ H
Sbjct: 332 YISWNSMLSCYVQNSFYA-EAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFH 390
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
A+A K + D VGN L+DMY K G I + + F+ MG ++ ISWT+++A +A+
Sbjct: 391 AYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHS 450
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACS-----------HTGLTCEGWELFTDMINKYR 466
EA+E+ +++ EG++ + + S+L C H G D+I + R
Sbjct: 451 EALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNG---LLDLILENR 507
Query: 467 ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
+ +D++ G+ + + N+ +++ K S W++++ C+ G
Sbjct: 508 L----------IDIYGECGEFDHSLNLFQRVEKKDIVS-WTSMINCCTNNG 547
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 180/556 (32%), Positives = 311/556 (55%), Gaps = 1/556 (0%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
D + T ++L+ C + K +Q +IH+ II GYE N + ++ Y+K G + A
Sbjct: 309 DVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDA 368
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
F + + ++V W+A+I+ Q G E ++ +F M NQ+T S L A
Sbjct: 369 IGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNT 428
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
LQ G+ I + K F ++ V +AL+ +Y K G + D L+E + +D++SWNA +
Sbjct: 429 GNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYL 488
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
GL G D +F M+ +G P+ +T SIL + ++ Q+H IIK L+
Sbjct: 489 SGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLD 548
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+N + +LID+YAK + A + + D+ + T +I+ +A+ N ++A + F+
Sbjct: 549 DNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQT-NQGEKALNYFRQ 607
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M + + ++ L L+ C+++ASL G+Q+H+ FK D VG+AL+DMYAK G
Sbjct: 608 MQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGC 667
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ +A F+ + ++ I+W ++I GYA++G G++A+ ++ M EG+ P+ VTF +L A
Sbjct: 668 MEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSA 727
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
CSH GL EG E F M + I P +H +C+VD+ R G+ + + I++M + A
Sbjct: 728 CSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNAL 787
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
+W +LGA ++ N LGE AA LF+++PE+ +Y++LSNI+ G WD+ ++ R LM
Sbjct: 788 IWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMS 847
Query: 565 ERSLRKNPGYSFLQSS 580
+ ++K PG S+++++
Sbjct: 848 SKGVKKEPGCSWVEAN 863
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 162/522 (31%), Positives = 268/522 (51%), Gaps = 15/522 (2%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y S+L+ C K++ A IH I+ + + HL ++ YAK AR +MP
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
+R+VVSWTA+I G G+ +++ +F M G+ N+FT ++ L+AC+ L G+
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF 212
+ K + +LFV SAL+DLYAKCG IE A +F + ++ V+WN ++ G A +G
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS 272
LF SMM +K + FTL ++L+ L + IH LIIK G E + +
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCG 354
Query: 273 LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI 332
L+D+Y+K G A +++++ K DI+ +ALI+ + S+E+ LF M L
Sbjct: 355 LVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQ-QGQSEESIKLFHLMRLGDTLP 413
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAF 392
+ +C +L+ N +L G+ IHA +KY D AV NAL+ MY K+G + D + +
Sbjct: 414 NQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLY 473
Query: 393 DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTC 452
+ M D+++ISW + ++G G + ++ M EG +PN TF+S+L +CS
Sbjct: 474 ESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVH 533
Query: 453 EGWELFTDMINKYRILPRAEHFSC--VVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
G ++ +I +F C ++D++A+ LE A +++++ + W+ I+
Sbjct: 534 YGRQVHAHIIKNQL---DDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFT-WTVII 589
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGA 552
+ Y T+ GE A M+ E V N +T AG
Sbjct: 590 ---TNYAQTNQGEKALNYFRQMQQEG-----VKPNEFTLAGC 623
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 180/556 (32%), Positives = 311/556 (55%), Gaps = 1/556 (0%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
D + T ++L+ C + K +Q +IH+ II GYE N + ++ Y+K G + A
Sbjct: 309 DVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDA 368
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
F + + ++V W+A+I+ Q G E ++ +F M NQ+T S L A
Sbjct: 369 IGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNT 428
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
LQ G+ I + K F ++ V +AL+ +Y K G + D L+E + +D++SWNA +
Sbjct: 429 GNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYL 488
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
GL G D +F M+ +G P+ +T SIL + ++ Q+H IIK L+
Sbjct: 489 SGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLD 548
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+N + +LID+YAK + A + + D+ + T +I+ +A+ N ++A + F+
Sbjct: 549 DNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQT-NQGEKALNYFRQ 607
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M + + ++ L L+ C+++ASL G+Q+H+ FK D VG+AL+DMYAK G
Sbjct: 608 MQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGC 667
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ +A F+ + ++ I+W ++I GYA++G G++A+ ++ M EG+ P+ VTF +L A
Sbjct: 668 MEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSA 727
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
CSH GL EG E F M + I P +H +C+VD+ R G+ + + I++M + A
Sbjct: 728 CSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNAL 787
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
+W +LGA ++ N LGE AA LF+++PE+ +Y++LSNI+ G WD+ ++ R LM
Sbjct: 788 IWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMS 847
Query: 565 ERSLRKNPGYSFLQSS 580
+ ++K PG S+++++
Sbjct: 848 SKGVKKEPGCSWVEAN 863
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 162/522 (31%), Positives = 268/522 (51%), Gaps = 15/522 (2%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y S+L+ C K++ A IH I+ + + HL ++ YAK AR +MP
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
+R+VVSWTA+I G G+ +++ +F M G+ N+FT ++ L+AC+ L G+
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF 212
+ K + +LFV SAL+DLYAKCG IE A +F + ++ V+WN ++ G A +G
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS 272
LF SMM +K + FTL ++L+ L + IH LIIK G E + +
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCG 354
Query: 273 LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI 332
L+D+Y+K G A +++++ K DI+ +ALI+ + S+E+ LF M L
Sbjct: 355 LVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQ-QGQSEESIKLFHLMRLGDTLP 413
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAF 392
+ +C +L+ N +L G+ IHA +KY D AV NAL+ MY K+G + D + +
Sbjct: 414 NQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLY 473
Query: 393 DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTC 452
+ M D+++ISW + ++G G + ++ M EG +PN TF+S+L +CS
Sbjct: 474 ESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVH 533
Query: 453 EGWELFTDMINKYRILPRAEHFSC--VVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
G ++ +I +F C ++D++A+ LE A +++++ + W+ I+
Sbjct: 534 YGRQVHAHIIKNQL---DDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFT-WTVII 589
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGA 552
+ Y T+ GE A M+ E V N +T AG
Sbjct: 590 ---TNYAQTNQGEKALNYFRQMQQEG-----VKPNEFTLAGC 623
>gi|297738569|emb|CBI27814.3| unnamed protein product [Vitis vinifera]
Length = 555
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 190/578 (32%), Positives = 314/578 (54%), Gaps = 65/578 (11%)
Query: 7 NFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+F+T ++ + L+C +L D S IHA ++TNG NL
Sbjct: 22 DFRTNYHSRSFNYLLNCCSSLPDLSR-------------------IHALVVTNGCGQNLL 62
Query: 67 LSTKVIIFYAKVGDVLS-ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
LSTK+II + + ARK FD+MP+R+V W +I GYA G E AL ++S M +
Sbjct: 63 LSTKLIITACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGA 122
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
G+ + +T+ +R+CA + L+ G+ + +I K F ++FV+S+L+ +Y++ G
Sbjct: 123 GLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGM 182
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGG 245
++F + +++VSW A+I G + + +FR M+ G +P+ TL S+L A G
Sbjct: 183 ELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPA-CAG 241
Query: 246 IELMKISQ-IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
+E + + + IH IKLG++ LT +LI +Y K G++ +A L+ M+ +++S A+
Sbjct: 242 LEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAM 301
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
I+ + ++ N A LF+ M +K+ D + + +V S L R++
Sbjct: 302 IAAYEQN-NAGANAVKLFRRMQAEKVDFDYITM-------VSVISAYLAREV-------- 345
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
F+ + ++V+SWTS+I A HG+G +A++L+
Sbjct: 346 ---------------------------FERLPCRSVVSWTSMIGACASHGHGEDALKLFS 378
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
+MK EG+ PN TF ++ AC H+GL EG + F M+ Y I+P EH +C+VDL R
Sbjct: 379 RMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRA 438
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLS 544
G L AY I +M ++P S+W A+LG+C I+ N L EL A LF ++P+ YV++S
Sbjct: 439 GSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMS 498
Query: 545 NIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
NIY AG W++A + RKLMEER L+K PG+S ++ +++
Sbjct: 499 NIYAEAGRWEDAARLRKLMEERELKKIPGHSLVEVNRR 536
>gi|449523019|ref|XP_004168522.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Cucumis sativus]
Length = 747
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 192/582 (32%), Positives = 324/582 (55%), Gaps = 9/582 (1%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDP--STYMSLLQFCIDKKAERQAHLIHAHIITNG 60
+V NF G + L + + P S+ + ++Q + K Q H +I +G
Sbjct: 119 MVHGNFSNGSIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSG 178
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN-VVSWTAMISGYAQNGYDENALLVF 119
+ + L + ++ YA+V + A K F M RN VVSW+ MI G+ Q G DE L+F
Sbjct: 179 FSAILSVQNSLLSLYAEV-HMYFAYKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMF 237
Query: 120 SAML-RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
M+ +G+ + T S L+AC ++ + G M+ G + ++LFV ++L+D+Y+K
Sbjct: 238 RNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSK 297
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
C + A+ F+ I K+++SWN M+ + + ++ L +M+R+G + D TL ++
Sbjct: 298 CFNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANV 357
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
L+ + ++ +K +H +II+ G ES+ L S+ID YAK + A ++ M K D+
Sbjct: 358 LQIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDV 417
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
++ + +I+GFAR+ EA +FK M + + + I+ LM CA A L + H
Sbjct: 418 VAWSTMIAGFARN-GKPDEAISVFKQMNEEVIPNNVSIMNLM-EACAVSAELRQSKWAHG 475
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHE 418
A + + + A+G ++IDMY+K G+I + RAF+++ KNV+ W+++I+ + +G HE
Sbjct: 476 IAVRRGLASEVAIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHE 535
Query: 419 AIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVV 478
A+ L++K+K G PN VT LSLL ACSH GL EG FT M+ K+ I P EH+SC+V
Sbjct: 536 ALMLFEKIKQNGTKPNAVTALSLLSACSHGGLIEEGLSFFTSMVQKHGIEPGLEHYSCIV 595
Query: 479 DLFARRGQLESAYNMIRQM--NIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEK 536
D+ +R G+ A +I ++ ++ AS+W +L +C YGN SLG AA + +EP
Sbjct: 596 DMLSRAGKFNEALELIEKLPKEMEAGASIWGTLLSSCRSYGNISLGSGAASRVLQLEPLS 655
Query: 537 SVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
S Y++ SN+Y G ++ K R+L +E+ ++ GYS +
Sbjct: 656 SAGYMLASNLYANCGLMIDSAKMRRLAKEKGVKVVAGYSLVH 697
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 139/472 (29%), Positives = 248/472 (52%), Gaps = 15/472 (3%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H +I G +S+ ++ I FY K GD+ SA++AFD ++ VSW M+ G NG
Sbjct: 69 MHGCLIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGS 128
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
L F + + N + ++A ++ G G I + F L V+++
Sbjct: 129 IMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNS 188
Query: 172 LLDLYAKCGWIEDAWILF-ERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ-GMK 229
LL LYA+ + A+ LF E R DVVSW+ MIGG G ++ F +FR+M+ + G+
Sbjct: 189 LLSLYAEVH-MYFAYKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIP 247
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
PD T+ S+L+A ++ + +H L+I GLE + SLID+Y+K ++ SA++
Sbjct: 248 PDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKA 307
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
++ + + +IIS ++S + +++H EA L M+ + D+V L +L I +
Sbjct: 308 FKEIPEKNIISWNLMLSAYILNESH-LEALALLGTMVREGAEKDEVTLANVLQIAKHFLD 366
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
R +H + + + N++ID YAK + A FD M K+V++W+++IAG
Sbjct: 367 SLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAG 426
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG-LTCEGWELFTDMINKYRIL 468
+A++G EAI ++K+M E ++PN+V+ ++L+ AC+ + L W + + +
Sbjct: 427 FARNGKPDEAISVFKQMNEE-VIPNNVSIMNLMEACAVSAELRQSKWA--HGIAVRRGLA 483
Query: 469 PRAEHFSCVVDLFARRGQLES---AYNMIRQMNIKPTASLWSAILGACSIYG 517
+ ++D++++ G +E+ A+N I Q N+ WSA++ A I G
Sbjct: 484 SEVAIGTSIIDMYSKCGDIEASIRAFNQIPQKNV----VCWSAMISAFRING 531
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 208/447 (46%), Gaps = 56/447 (12%)
Query: 113 ENALLVFSAMLRSGVR-ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ AL ++ + SG + ++ + S L+AC+ + G M G + K + + ++
Sbjct: 29 QEALQLYHEIRISGAQLSDTWVLPSILKACSNTSFNLGTAM-HGCLIKQGCQSSTSIANS 87
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSF-----WLFRSMMRQ 226
+D Y K G ++ A F+ + KD VSWN M+ G F++ S W +
Sbjct: 88 TIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHG----NFSNGSIMAGLCWFIKGRFAH 143
Query: 227 GMKPDCFTLGSILRASVGGIELMKISQ---IHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
+P+ +L +++A EL SQ H I + G + + SL+ +YA+ +
Sbjct: 144 -FQPNISSLLLVIQAFR---ELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEV-HM 198
Query: 284 RSAYQLYRSM-LKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI--DDVILCLM 340
AY+L+ M ++ D++S + +I GF + ++ F +F++M+ + GI D V + +
Sbjct: 199 YFAYKLFGEMSVRNDVVSWSVMIGGFVQ-IGEDEQGFLMFRNMV-TEAGIPPDGVTVVSV 256
Query: 341 LNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNV 400
L C N+ ++LG +H D VGN+LIDMY+K + A +AF E+ +KN+
Sbjct: 257 LKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNI 316
Query: 401 ISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH--TGLTC------ 452
ISW +++ Y + EA+ L M EG ++VT ++L H L C
Sbjct: 317 ISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSVHGV 376
Query: 453 ---EGWE----LFTDMINKYRILPRAE---------------HFSCVVDLFARRGQLESA 490
+G+E L +I+ Y E +S ++ FAR G+ + A
Sbjct: 377 IIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEA 436
Query: 491 YNMIRQMN--IKPTASLWSAILGACSI 515
++ +QMN + P ++ AC++
Sbjct: 437 ISVFKQMNEEVIPNNVSIMNLMEACAV 463
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 4/215 (1%)
Query: 316 KEAFDLFKDMILKKMGIDDV-ILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNA 374
+EA L+ ++ + + D +L +L C+N S NLG +H K ++ N+
Sbjct: 29 QEALQLYHEIRISGAQLSDTWVLPSILKACSNT-SFNLGTAMHGCLIKQGCQSSTSIANS 87
Query: 375 LIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
ID Y K G++ A RAFD +K+ +SW ++ G +G + + K + PN
Sbjct: 88 TIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRFAHFQPN 147
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI 494
+ L ++ A + +G+ F I + + ++ L+A + AY +
Sbjct: 148 ISSLLLVIQAFRELKIYSQGFA-FHGYIFRSGFSAILSVQNSLLSLYAEV-HMYFAYKLF 205
Query: 495 RQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
+M+++ WS ++G G G L RN+
Sbjct: 206 GEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNM 240
>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 180/531 (33%), Positives = 294/531 (55%), Gaps = 9/531 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HA +I G+ S++ L+ ++ Y K G V A+ F+ M R+V+SW +++SGYAQ G
Sbjct: 168 LHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGN 227
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
L + M G+ +Q T+ S + A A L G+M+ G I + ++ ++++
Sbjct: 228 IREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETS 287
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+ +Y KCG + A+ +FE + KDV+SW AMI GL D + +FR M++ + P
Sbjct: 288 LIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPS 347
Query: 232 CFTLGSILRASVGGIELMKISQIHDLI----IKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
T+ S+L A + +H I IKL + S N SL+ +YAK G + +
Sbjct: 348 TATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQN----SLVTMYAKCGHLEQSC 403
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
++ M + DI+S A++SG A++ H +A LF +M + D + + +L CA++
Sbjct: 404 SVFDRMSRRDIVSWNAIVSGHAQN-GHLCKALLLFNEMRKARQRPDSITVVSLLQACASI 462
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI 407
+L+ G+ IH F K + AL+DMY+K G++ A + FD M ++++SW+S+I
Sbjct: 463 GALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSII 522
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRI 467
AGY HG G A+ +Y H G+ PN V +LS+L ACSH GL +G F M + I
Sbjct: 523 AGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGI 582
Query: 468 LPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAAR 527
PR EH +C+VDL +R G++E AY+ ++M KP+ + +L AC GN LG++ AR
Sbjct: 583 EPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAR 642
Query: 528 NLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+ ++P + NYV L++ Y + WD + M+ L+K PG+SF++
Sbjct: 643 EIVILKPANAGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIE 693
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 158/526 (30%), Positives = 281/526 (53%), Gaps = 10/526 (1%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
DT D T+ SL++ C H +I +GY S+ +++T +I FY+K G SA
Sbjct: 43 DTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSA 102
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
RK FD M +RNVV WT MI Y + G + A +++ M R G++ + T L +
Sbjct: 103 RKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLEL 162
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
LQ + + + F ++ + +++L++Y KCG +EDA LFE ++ +DV+SWN+++
Sbjct: 163 VHLQ---CLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLV 219
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G A G + L M G++PD T GS++ A+ +L +H I++ GLE
Sbjct: 220 SGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLE 279
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ + SLI +Y K G++ SA++++ M+ D+IS TA+ISG ++D + A +F+
Sbjct: 280 QDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDC-ADMAVTVFRR 338
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M+ ++ + +L CA + S LG +H + + + D N+L+ MYAK G
Sbjct: 339 MLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGH 398
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ + FD M ++++SW ++++G+A++G+ +A+ L+ +M+ P+ +T +SLL A
Sbjct: 399 LEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQA 458
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
C+ G +G + + + K + P + +VD++++ G L SA +M + S
Sbjct: 459 CASIGALHQG-KWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVS 517
Query: 505 LWSAILGACSIYGNTSLGELAARNLFD-MEPEKSVNYVVLSNIYTA 549
WS+I+ YG+ GE A R D + N+V+ +I +A
Sbjct: 518 -WSSIIAG---YGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSA 559
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 211/407 (51%), Gaps = 18/407 (4%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDP--STYMSLLQFCIDKKAERQAHLIHAHIITN 59
++V + G +++ L+ + ++P T+ SL+ + ++H HI+
Sbjct: 217 SLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRA 276
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G E + H+ T +I Y K G+V SA + F+ M ++V+SWTAMISG QN + A+ VF
Sbjct: 277 GLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVF 336
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
ML+S V + T +S L ACA + G + G I + R ++ +++L+ +YAKC
Sbjct: 337 RRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKC 396
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G +E + +F+R+ R+D+VSWNA++ G A G + LF M + +PD T+ S+L
Sbjct: 397 GHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLL 456
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
+A L + IH+ + K L + +L+D+Y+K G + SA + + M + D++
Sbjct: 457 QACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLV 516
Query: 300 SCTALISGFARDDNHSK--EAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
S +++I+G+ +H K A ++ D + + + VI +L+ C++ ++ G
Sbjct: 517 SWSSIIAGYG---SHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQG---- 569
Query: 358 AFAFKYQSSYDAAVGNAL------IDMYAKSGEIADANRAFDEMGDK 398
+F + + D + L +D+ +++G + +A + M K
Sbjct: 570 -LSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPK 615
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 210/413 (50%), Gaps = 6/413 (1%)
Query: 98 SWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSI 157
S+ A+I+ + G + LL +S+ML + + T+ S ++AC + G +
Sbjct: 15 SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74
Query: 158 QKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSF 217
+ + ++ ++L++ Y+K G + A +F+ ++ ++VV W MIG G +D +F
Sbjct: 75 IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAF 134
Query: 218 WLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVY 277
++ M RQG++P T+ +L G +EL+ + +H +I+ G S L S+++VY
Sbjct: 135 SMYNIMRRQGIQPSSVTMLGLLS---GVLELVHLQCLHACVIQYGFGSDVALANSMLNVY 191
Query: 278 AKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVIL 337
K G + A L+ M D+IS +L+SG+A+ N +E L M + D
Sbjct: 192 CKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGN-IREVLQLLIRMKTDGIEPDQQTF 250
Query: 338 CLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD 397
+++ A + L +G+ +H + D+ + +LI MY K G + A R F+ M
Sbjct: 251 GSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMH 310
Query: 398 KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWEL 457
K+VISWT++I+G ++ A+ ++++M ++P+ T S+L AC+ G G +
Sbjct: 311 KDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSV 370
Query: 458 FTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
I + RI + +V ++A+ G LE + ++ +M+ + S W+AI+
Sbjct: 371 H-GYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVS-WNAIV 421
>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
Length = 921
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 194/573 (33%), Positives = 317/573 (55%), Gaps = 25/573 (4%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
TY S++ C E+ ++H II G E+ +L ++ FY K G++ A + F+R+
Sbjct: 227 TYASVVNACGSSGEEKYGAMVHGRIIKAGLEAT-NLWNSLVTFYGKCGNLQHASQLFERI 285
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLR--SGVRANQFTYSSALRACARMRWLQG 149
++VVSW AMI+ Q G ENAL +F ML+ V+ N+ T+ S L A + + L+
Sbjct: 286 SRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRC 345
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
GR I I + + + ++L+ Y+KC + A +FER+ +D++SWN+M+ G
Sbjct: 346 GREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQ 405
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSIL----RASVGGIELMKISQIHDLIIKLGLES 265
F +F+ MM G++PD +L I R S G I + +IH I++
Sbjct: 406 NEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPG 465
Query: 266 --SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
S ++ +++ +YAK+ I A ++++ M D S A++ G++R+ ++ +F
Sbjct: 466 GVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKF-EDVLMIFL 524
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDA-------AVGNALI 376
D++ + +D V L ++L C + SL LG+Q HA K + D ++ NALI
Sbjct: 525 DILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALI 584
Query: 377 DMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDV 436
MY+K G I DA + F +M K+V SWT++I G A HG EA++L+++MK +G+ PN V
Sbjct: 585 SMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQV 644
Query: 437 TFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQ 496
TFL+LL AC+H GL EG F M N Y + P EH++C++DLF R GQ + A +++ +
Sbjct: 645 TFLALLMACAHGGLVQEGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLV-E 703
Query: 497 MNI---KP----TASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTA 549
I KP +LW +LGAC LG AA + ++EPE Y++L+N+Y +
Sbjct: 704 FGITLFKPYHDDILNLWKVLLGACHASKQLDLGVEAATKILELEPEDEATYILLANLYAS 763
Query: 550 AGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+G W++A K RK M ++ LRK G S++ + +
Sbjct: 764 SGLWEDAIKVRKAMRDKGLRKEVGCSWIDTGNR 796
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 226/440 (51%), Gaps = 19/440 (4%)
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
A++ FD P R+V+SW+A+I+ Y++ G A +F M+ G++ N F+ +S L+
Sbjct: 74 AQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCS 133
Query: 144 MRWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE--RKDVVSW 200
+ R + G SI+ G F + +++A + +Y++CG +EDA +F+ D++ W
Sbjct: 134 TGEIGLCRQLHGWSIRTG-FGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLW 192
Query: 201 NAMIGGLAMQGFNDDSFWLFRSMMRQG-MKPDCFTLGSILRASVGGIELMKISQIHDLII 259
N++I G + LF M+ G + P T S++ A E + +H II
Sbjct: 193 NSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRII 252
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
K GLE++N L SL+ Y K G+++ A QL+ + + D++S A+I+ + A
Sbjct: 253 KAGLEATN-LWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAA-NEQRGEGENAL 310
Query: 320 DLFKDMILKKMGI--DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
LF+ M+ + + + V +L+ + +++L GR+IHA F+ D ++ N+LI
Sbjct: 311 GLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLIT 370
Query: 378 MYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVT 437
Y+K E+ A F+ + +++ISW S++AGY ++ +++K+M G+ P+ +
Sbjct: 371 FYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHS 430
Query: 438 FLSLLFACSH--TGLTC--EGWELFTDMINKYRILPRAEHFS---CVVDLFARRGQLESA 490
+ A S +GL G E+ ++ RI P S ++ ++A+ ++ A
Sbjct: 431 LTIIFNAASRDSSGLIYFRRGKEIHGYILR--RITPGGVSLSVSNAILKMYAKFNRIADA 488
Query: 491 YNMIRQMNIKPTASLWSAIL 510
+ + M + + S W+A++
Sbjct: 489 EKIFKGMKNRDSYS-WNAMM 507
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 143/291 (49%), Gaps = 13/291 (4%)
Query: 278 AKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVIL 337
+++ ++ A QL+ + D+IS +ALI+ ++R N + +AF LF+ M+ + + + L
Sbjct: 66 SEHERLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFA-QAFGLFQKMMGEGLQPNGFSL 124
Query: 338 CLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG- 396
+L + + + L RQ+H ++ + D+ + A I MY++ G + DA R FDE
Sbjct: 125 ASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSL 184
Query: 397 -DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV-PNDVTFLSLLFACSHTGLTCEG 454
+++ W S+IA Y HG E + L+ KM G+V P ++T+ S++ AC +G
Sbjct: 185 LALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGE---- 240
Query: 455 WELFTDMINKYRI---LPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
E + M++ I L ++ +V + + G L+ A + +++ K S W+A++
Sbjct: 241 -EKYGAMVHGRIIKAGLEATNLWNSLVTFYGKCGNLQHASQLFERISRKDVVS-WNAMIA 298
Query: 512 ACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKL 562
A G R + +EP N V ++ +A R R++
Sbjct: 299 ANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREI 349
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 197/580 (33%), Positives = 314/580 (54%), Gaps = 4/580 (0%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITN 59
I+RA G A+ S + P+ TY +L+ C A IH+H
Sbjct: 79 QIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMF 138
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G ES++ + T ++ FYAK G ++ A++ F M R+VV+W AMI+G + G ++A+ +
Sbjct: 139 GLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLI 198
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
M G+ N T L + L G+ + G + F + V + LLD+YAKC
Sbjct: 199 MQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKC 258
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM-MRQGMKPDCFTLGSI 238
+ A +F+ + ++ VSW+AMIGG ++ LF M ++ M P TLGS+
Sbjct: 259 QCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSV 318
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
LRA +L + ++H IIKLG L +L+ +YAK G I A + + M D
Sbjct: 319 LRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDS 378
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
+S +A++SG ++ N + A +F+ M L + D + +L C+++A+L G H
Sbjct: 379 VSFSAIVSGCVQNGN-AAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHG 437
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHE 418
+ + D + NALIDMY+K G+I+ A F+ M +++SW ++I GY HG G E
Sbjct: 438 YLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGME 497
Query: 419 AIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVV 478
A+ L+ + G+ P+D+TF+ LL +CSH+GL EG F M + I+PR EH C+V
Sbjct: 498 ALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMV 557
Query: 479 DLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSV 538
D+ R G ++ A++ IR M +P +WSA+L AC I+ N LGE ++ + + PE +
Sbjct: 558 DILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTG 617
Query: 539 NYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
N+V+LSNIY+AAG WD+A R ++ L+K PG S+++
Sbjct: 618 NFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIE 657
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 150/493 (30%), Positives = 258/493 (52%), Gaps = 14/493 (2%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
+ Y+ LL+ CI K+ +A IH H + N ++ + K+ Y V+ AR+ FD
Sbjct: 9 NNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDE 68
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+P +V+ W +I YA NG + A+ ++ +ML GVR N++TY L+AC+ + ++ G
Sbjct: 69 IPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
I + ++FV +AL+D YAKCG + +A LF + +DVV+WNAMI G ++
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLY 188
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
G DD+ L M +G+ P+ T+ +L L +H ++ ++ +
Sbjct: 189 GLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVG 248
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK- 329
L+D+YAK + A +++ M + +S +A+I G+ D KEA +LF MILK
Sbjct: 249 TGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDC-MKEALELFDQMILKDA 307
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
M V L +L CA + L+ GR++H + K S D +GN L+ MYAK G I DA
Sbjct: 308 MDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAI 367
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT- 448
R FDEM K+ +S++++++G ++G A+ +++ M+ G+ P+ T L +L ACSH
Sbjct: 368 RFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLA 427
Query: 449 ----GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
G G+ + I + ++D++++ G++ A + +M+ S
Sbjct: 428 ALQHGFCSHGYLIVRGFATDTLIC------NALIDMYSKCGKISFAREVFNRMDRHDIVS 481
Query: 505 LWSAILGACSIYG 517
W+A++ I+G
Sbjct: 482 -WNAMIIGYGIHG 493
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 199/555 (35%), Positives = 313/555 (56%), Gaps = 12/555 (2%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ +L+ C R IHAH G ++L +ST +I Y + AR F +M
Sbjct: 102 TFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKM 161
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAML-RSGVRANQFTYSSALRACARMRWLQGG 150
P R+VV+W AM++GYA +G +A+ M G+R N T S L A+ L G
Sbjct: 162 PMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQG 221
Query: 151 RMIQGSIQKGRFVEN---LFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
I + +N + + +ALLD+YAKC + A +F + ++ V+W+A+IGG
Sbjct: 222 TSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGF 281
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCF----TLGSILRASVGGIELMKISQIHDLIIKLGL 263
+ ++F LF+ M+ +G+ CF ++ S LR +L +Q+H LI K G+
Sbjct: 282 VLCDRMTEAFNLFKDMLVEGL---CFLSATSVASALRVCASLADLHMGTQLHALIAKSGI 338
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
+ + SL+ +YAK G I A + + D IS AL+SG ++ ++EAF +FK
Sbjct: 339 HADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGK-AEEAFLVFK 397
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
M M D + ++ C+++A+L G+ H + + ++ N+LIDMYAK G
Sbjct: 398 KMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCG 457
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
+I + + FD+M ++V+SW ++IAGY HG G EA L+ MK++G P+DVTF+ L+
Sbjct: 458 KIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIA 517
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
ACSH+GL EG F M +KY ILPR EH+ C+VDL AR G L+ AY I+ M +K
Sbjct: 518 ACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADV 577
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
+W A+LGAC I+ N LG+ +R + + PE + N+V+LSNI++AAG +D A + R +
Sbjct: 578 RVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQ 637
Query: 564 EERSLRKNPGYSFLQ 578
+ + +K+PGYS+++
Sbjct: 638 KVKGFKKSPGYSWIE 652
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/444 (30%), Positives = 237/444 (53%), Gaps = 8/444 (1%)
Query: 79 GDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSAL 138
G + AR+ FDR+P + ++ A+I Y+ G A+ ++ +MLR V N++T+ L
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 139 RACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVV 198
+AC+ + L+ GR I +LFV +AL+DLY +C A +F ++ +DVV
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 199 SWNAMIGGLAMQGFNDDSFWLFRSMMRQ-GMKPDCFTLGSILRASVGGIELMKISQIHDL 257
+WNAM+ G A G + M G++P+ TL S+L L + + IH
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227
Query: 258 IIKLGLESSNK--LTGS-LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH 314
++ LE + + L G+ L+D+YAK + A +++ M + ++ +ALI GF D
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287
Query: 315 SKEAFDLFKDMILKKMG-IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN 373
+ EAF+LFKDM+++ + + + L +CA++A L++G Q+HA K D N
Sbjct: 288 T-EAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASN 346
Query: 374 ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP 433
+L+ MYAK+G I +A FDE+ K+ IS+ +L++G ++G EA ++KKM+ M P
Sbjct: 347 SLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEP 406
Query: 434 NDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNM 493
+ T +SL+ ACSH G +I + L + ++D++A+ G+++ + +
Sbjct: 407 DIATMVSLIPACSHLAALQHGKCSHGSVIIRGLAL-ETSICNSLIDMYAKCGKIDLSRQV 465
Query: 494 IRQMNIKPTASLWSAILGACSIYG 517
+M + S W+ ++ I+G
Sbjct: 466 FDKMPARDVVS-WNTMIAGYGIHG 488
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 151/312 (48%), Gaps = 11/312 (3%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L ++ S L+ C +HA I +G ++L S ++ YAK G + A
Sbjct: 304 FLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATM 363
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FD + ++ +S+ A++SG QNG E A LVF M + + T S + AC+ +
Sbjct: 364 FFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAA 423
Query: 147 LQGGRMIQGS-IQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
LQ G+ GS I +G +E S L+D+YAKCG I+ + +F+++ +DVVSWN MI
Sbjct: 424 LQHGKCSHGSVIIRGLALETSICNS-LIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIA 482
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLE 264
G + G ++ LF M QG PD T ++ A S G+ + K G+
Sbjct: 483 GYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGIL 542
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALISGFARDDNHSKEAFDLFK 323
+ ++D+ A+ G + AYQ +SM LK D+ AL+ N DL K
Sbjct: 543 PRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKN-----IDLGK 597
Query: 324 DM--ILKKMGID 333
+ I++K+G +
Sbjct: 598 QVSRIIQKLGPE 609
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 167/369 (45%), Gaps = 8/369 (2%)
Query: 173 LDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDC 232
L+ + G + A +F+RI D ++NA+I + G + L+RSM+R + P+
Sbjct: 41 LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100
Query: 233 FTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRS 292
+T +L+A ++L IH GL + ++ +LID+Y + A ++
Sbjct: 101 YTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAK 160
Query: 293 MLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNL 352
M D+++ A+++G+A + L + + L +L + A +L
Sbjct: 161 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQ 220
Query: 353 GRQIHAFAFKY---QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
G IHA+ + Q+ +G AL+DMYAK ++ A R F M +N ++W++LI G
Sbjct: 221 GTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGG 280
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFL-SLLFACSHTGLTCEGWELFTDMINKYRIL 468
+ EA L+K M EG+ T + S L C+ G +L +I K I
Sbjct: 281 FVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHA-LIAKSGIH 339
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARN 528
+ ++ ++A+ G + A ++ +K T S + A+L C G L +
Sbjct: 340 ADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTIS-YGALLSGCVQNGKAEEAFLVFKK 398
Query: 529 L--FDMEPE 535
+ +MEP+
Sbjct: 399 MQACNMEPD 407
>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 197/627 (31%), Positives = 327/627 (52%), Gaps = 81/627 (12%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
+ LLQ C +Q IH+ II G + L+ +V+ YA G V A++ F+ P
Sbjct: 37 FNDLLQQCSKSHLSQQ---IHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSP 93
Query: 93 ER---NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG 149
N++ W +++ +GY E AL ++ M + GV A+ FT+ +RACA M +
Sbjct: 94 IECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKL 153
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
R + G + + F NL V + L+ +Y K G ++DA +FER+ + VSWN M+ G A+
Sbjct: 154 CRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYAL 213
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSIL--RASVGG-IELMKI--------------- 251
+ +FR M G++P+ T S+L A G +E M++
Sbjct: 214 NYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEA 273
Query: 252 -----------------SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY---- 290
IH ++K G E+ + SLI +Y K+G++ +A L+
Sbjct: 274 LAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIK 333
Query: 291 -----------------------------------RSMLKTDIISCTALISGFARDDNHS 315
M++ +++S +A+I GFA
Sbjct: 334 TKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFA-SKGQG 392
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNAL 375
+EA +LF+ M L K+ + V + +L++CA +A+L+LGR+IH + + VGN L
Sbjct: 393 EEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGL 452
Query: 376 IDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND 435
I+MY KSG + N F+++ +K++ISW +++AGY HG G AI + +M +G P+
Sbjct: 453 INMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDG 512
Query: 436 VTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIR 495
VTF+++L ACSH GL EG ELF MI ++R+ P+ EH++C+VDL R G L+ A +++
Sbjct: 513 VTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVK 572
Query: 496 QMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDN 555
M ++P A +W A+L +C ++ NT + E A +F++ E + +Y++LSNIY A+G W++
Sbjct: 573 SMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWED 632
Query: 556 ARKTRKLMEERSLRKNPGYSFLQSSKK 582
+ K R + + L+K PG S++Q KK
Sbjct: 633 SAKVRISAKTKGLKKTPGQSWIQVKKK 659
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 126/492 (25%), Positives = 215/492 (43%), Gaps = 95/492 (19%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLL----DPSTYMSLLQFCIDKKAERQAHLIHAHII 57
+I+RAN G ++AL+ + C L D T+ +++ C + + +H H++
Sbjct: 105 SILRANVAHGYCEEALE--IYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVV 162
Query: 58 TNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYD----- 112
G++ NLH+ +++ Y K+G + ARK F+RM R+ VSW M+SGYA N YD
Sbjct: 163 EMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALN-YDCHGAS 221
Query: 113 -----------ENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG------------ 149
E L+ ++++L S R Q + L RMR +
Sbjct: 222 EMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVS 281
Query: 150 --------GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN 201
G++I G + KG F LFVK++L+ LY K G + A ILF I+ K++VSWN
Sbjct: 282 VDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWN 341
Query: 202 AM---------------------------------------IGGLAMQGFNDDSFWLFRS 222
A+ IGG A +G +++ LFR
Sbjct: 342 ALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRR 401
Query: 223 MMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS-LIDVYAKYG 281
M +K + T+ S+L L +IH +++ L N L G+ LI++Y K G
Sbjct: 402 MQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVR-SLMDGNILVGNGLINMYTKSG 460
Query: 282 SIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLML 341
S + ++ + D+IS +++G+ + A F MI D V +L
Sbjct: 461 SFKEGNLVFEKIENKDLISWNTMVAGYG-IHGLGENAIRTFDQMIKDGFEPDGVTFVAVL 519
Query: 342 NICANVASLNLGRQ-----IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG 396
+ C++ + GR+ I F + Q + A ++D+ ++G + +A++ M
Sbjct: 520 SACSHAGLVAEGRELFDKMIKEFRVEPQMEHYA----CMVDLLGRAGLLQEASKVVKSMP 575
Query: 397 -DKNVISWTSLI 407
+ N W +L+
Sbjct: 576 VEPNACVWGALL 587
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 198/603 (32%), Positives = 321/603 (53%), Gaps = 53/603 (8%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ + + C + + R HA G+ SN+ + ++ Y++ G + ARK F
Sbjct: 126 DNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVF 185
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS-GVRANQFTYSSALRACARMRWL 147
D MP +VVSW ++I YA+ G + AL +FS M G R + T + L CA +
Sbjct: 186 DEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTR 245
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ G ++N+FV + L+D+YAK G +++A +F + KDVVSWNAM+ G
Sbjct: 246 SLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGY 305
Query: 208 AMQGFNDDSFWLF-----------------------------------RSMMRQGMKPDC 232
+ G +D+ LF R M+ G+KP+
Sbjct: 306 SQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNE 365
Query: 233 FTLGSILR--ASVGGIELMKISQIHDLIIKLGLE-------SSNKLTGSLIDVYAKYGSI 283
TL S+L ASVG LM +IH IK ++ N + LID+YAK +
Sbjct: 366 VTLISVLSGCASVGA--LMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKV 423
Query: 284 RSAYQLYRSM--LKTDIISCTALISGFARDDNHSKEAFDLFKDMILK--KMGIDDVILCL 339
A ++ S+ + D+++ T +I G+++ + +K A +L +M + + + +
Sbjct: 424 DIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANK-ALELLSEMFEEDCQTRPNAFTISC 482
Query: 340 MLNICANVASLNLGRQIHAFAFK-YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK 398
L CA++A+L++G+QIHA+A + Q++ V N LIDMYAK G+I DA FD M +K
Sbjct: 483 ALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEK 542
Query: 399 NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELF 458
N ++WTSL+ GY HGYG EA+ ++++M+ G + VT L +L+ACSH+G+ +G E F
Sbjct: 543 NEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYF 602
Query: 459 TDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
M + + P EH++C+VDL R G+L +A +I +M ++P +W A+L C I+G
Sbjct: 603 NRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGK 662
Query: 519 TSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
LGE AA+ + ++ +Y +LSN+Y AG W + + R LM + ++K PG S+++
Sbjct: 663 VELGEYAAKKITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVE 722
Query: 579 SSK 581
K
Sbjct: 723 GIK 725
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 142/533 (26%), Positives = 250/533 (46%), Gaps = 60/533 (11%)
Query: 44 KAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN--VVSWTA 101
K Q LIH +++ G + L+L++ +I Y +G + A R P + V W +
Sbjct: 39 KTISQVKLIHQKLLSFGILT-LNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNS 97
Query: 102 MISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGR 161
+I Y NG L F M + +T+ +AC + ++ G +
Sbjct: 98 LIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTG 157
Query: 162 FVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFR 221
F+ N+FV +AL+ +Y++CG + DA +F+ + DVVSWN++I A G + +F
Sbjct: 158 FMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFS 217
Query: 222 SMMRQ-GMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYA 278
M + G +PD TL ++L ASVG L K Q H + + + + L+D+YA
Sbjct: 218 KMTNEFGFRPDDITLVNVLPPCASVGTRSLGK--QFHGFAVTSEMIQNMFVGNCLVDMYA 275
Query: 279 KYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGID----- 333
K+G + A ++ +M D++S A+++G+++ ++A LF+ M +K+ +D
Sbjct: 276 KFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRF-EDAVRLFEQMQEEKIKMDVVTWS 334
Query: 334 ------------------------------DVILCLMLNICANVASLNLGRQIHAFAFKY 363
+V L +L+ CA+V +L G++IH +A KY
Sbjct: 335 AAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKY 394
Query: 364 QSSY-------DAAVGNALIDMYAKSGEIADANRAFDEMGDK--NVISWTSLIAGYAKHG 414
+ V N LIDMYAK ++ A FD + K +V++WT +I GY++HG
Sbjct: 395 PMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHG 454
Query: 415 YGHEAIELYKKMKHEG--MVPNDVTFLSLLFACSHTGLTCEGWELFTDMI-NKYRILPRA 471
++A+EL +M E PN T L AC+ G ++ + N+ +P
Sbjct: 455 DANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLF 514
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSI--YGNTSLG 522
+C++D++A+ G + A + M K + W++++ + YG +LG
Sbjct: 515 VS-NCLIDMYAKCGDIGDARLVFDNMMEKNEVT-WTSLMTGYGMHGYGEEALG 565
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 120/473 (25%), Positives = 212/473 (44%), Gaps = 69/473 (14%)
Query: 2 NIVRANFKTGQLKQALK-FSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIIT 58
+I+ + K G+ K AL+ FS + P T +++L C H +T
Sbjct: 198 SIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVT 257
Query: 59 NGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLV 118
+ N+ + ++ YAK G + A F MP ++VVSW AM++GY+Q G E+A+ +
Sbjct: 258 SEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRL 317
Query: 119 FS-----------------------------------AMLRSGVRANQFTYSSALRACAR 143
F ML SG++ N+ T S L CA
Sbjct: 318 FEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCAS 377
Query: 144 MRWLQGGRMIQGSIQK--------GRFVENLFVKSALLDLYAKCGWIEDAWILFERIERK 195
+ L G+ I K G EN+ + L+D+YAKC ++ A +F+ + K
Sbjct: 378 VGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQ-LIDMYAKCKKVDIARAMFDSLSPK 436
Query: 196 --DVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG--MKPDCFTLGSILRASVGGIELMKI 251
DVV+W MIGG + G + + L M + +P+ FT+ L A L
Sbjct: 437 ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIG 496
Query: 252 SQIHDLIIK-----LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
QIH ++ + L SN LID+YAK G I A ++ +M++ + ++ T+L++
Sbjct: 497 KQIHAYALRNQQNAVPLFVSN----CLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMT 552
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
G+ + +EA +F++M +D V L ++L C++ ++ G + + + ++
Sbjct: 553 GYGM-HGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME---YFNRMKTD 608
Query: 367 YDAAVGN----ALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHG 414
+ + G L+D+ ++G + A R +EM + + W +L++ HG
Sbjct: 609 FGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHG 661
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 190/427 (44%), Gaps = 50/427 (11%)
Query: 165 NLFVKSALLDLYAKCGWIEDAWILFERIERKD--VVSWNAMIGGLAMQGFNDDSFWLFRS 222
L + S L+ Y G + A L R D V WN++I G + F
Sbjct: 58 TLNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCL 117
Query: 223 MMRQGMKPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLGLESSNKLTGSLIDVYAKYG 281
M PD +T + +A G I ++ H L G S+ + +L+ +Y++ G
Sbjct: 118 MHSLSWTPDNYTFPFVFKA-CGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCG 176
Query: 282 SIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI--DDVILCL 339
S+ A +++ M D++S ++I +A+ K A ++F M + G DD+ L
Sbjct: 177 SLSDARKVFDEMPVWDVVSWNSIIESYAKLGK-PKMALEMFSKMT-NEFGFRPDDITLVN 234
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN 399
+L CA+V + +LG+Q H FA + + VGN L+DMYAK G + +AN F M K+
Sbjct: 235 VLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKD 294
Query: 400 VISWTSLIA-----------------------------------GYAKHGYGHEAIELYK 424
V+SW +++A GYA+ G G+EA+ + +
Sbjct: 295 VVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCR 354
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEH------FSCVV 478
+M G+ PN+VT +S+L C+ G G E+ I L + H + ++
Sbjct: 355 QMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLI 414
Query: 479 DLFARRGQLESAYNMIRQMNIKPTASL-WSAILGACSIYGNTSLGELAARNLFDMEPEKS 537
D++A+ +++ A M ++ K + W+ ++G S +G+ + +F+ + +
Sbjct: 415 DMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTR 474
Query: 538 VNYVVLS 544
N +S
Sbjct: 475 PNAFTIS 481
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 139/295 (47%), Gaps = 20/295 (6%)
Query: 250 KISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD--IISCTALISG 307
++ IH ++ G+ + N LT LI Y G + A L R +D + +LI
Sbjct: 43 QVKLIHQKLLSFGILTLN-LTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRS 101
Query: 308 FARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSY 367
+ ++ + + F M D+ + C ++S+ G HA +
Sbjct: 102 YG-NNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMS 160
Query: 368 DAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMK 427
+ VGNAL+ MY++ G ++DA + FDEM +V+SW S+I YAK G A+E++ KM
Sbjct: 161 NVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMT 220
Query: 428 HE-GMVPNDVTFLSLLFACSHTGLTC-----EGWELFTDMINKYRILPRAEHFSCVVDLF 481
+E G P+D+T +++L C+ G G+ + ++MI + +C+VD++
Sbjct: 221 NEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFV------GNCLVDMY 274
Query: 482 ARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEK 536
A+ G ++ A + M +K S W+A++ Y E A R M+ EK
Sbjct: 275 AKFGMMDEANTVFSNMPVKDVVS-WNAMVAG---YSQIGRFEDAVRLFEQMQEEK 325
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 189/554 (34%), Positives = 305/554 (55%), Gaps = 3/554 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ S+L+ C + +HAH++ ++ ++ + +I Y K GDV+SAR F
Sbjct: 134 DVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLF 193
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D+MP R+ +SW AMISGY +N L +F M + + T +S + AC + +
Sbjct: 194 DKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDER 253
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G + + + + N+ V ++L+ +Y G ++A +F +E +DVVSW +I G
Sbjct: 254 LGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCV 313
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
D + +++M G PD T+ S+L A +L ++H+L + G
Sbjct: 314 DNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVV 373
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ SLID+Y+K I A +++ + D+IS T++I+G R +N EA F+ MILK
Sbjct: 374 VANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGL-RINNRCFEALIFFRKMILK 432
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ V L L+ CA V +L G++IHA A K +D + NA++D+Y + G + A
Sbjct: 433 SKP-NSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTA 491
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
F+ + +K+V +W L+ GYA+ G G +EL+K+M + P+DVTF+SLL ACS +
Sbjct: 492 LNQFN-LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRS 550
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
G+ EG E F M Y I P +H++CVVDL R G+L A+ I +M IKP ++W A
Sbjct: 551 GMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGA 610
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L AC I+ + LGELAA+++F + E Y++L N+Y +G WD K R+ M+E L
Sbjct: 611 LLNACRIHRHVLLGELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMKEEGL 670
Query: 569 RKNPGYSFLQSSKK 582
+PG S+++ K
Sbjct: 671 IVDPGCSWVEVKGK 684
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 145/509 (28%), Positives = 264/509 (51%), Gaps = 18/509 (3%)
Query: 10 TGQLKQALKFSLSCPDTLL--DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYES-NLH 66
+G L+QALK S + + + +++L++ C +K+ + + ++++ ++
Sbjct: 11 SGNLEQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLSSLVTLLSVR 70
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
L ++ + + GDV +A F RM ER++ SW ++ GY + G+ + AL ++ +L +G
Sbjct: 71 LGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAG 130
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
+R + +T+ S LR+CA L GR + + + F ++ V +AL+ +Y KCG + A
Sbjct: 131 IRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSAR 190
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGG 245
+LF+++ +D +SWNAMI G + LF M + PD T+ S++ A + G
Sbjct: 191 MLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLG 250
Query: 246 IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALI 305
E + +Q+H +++ + + + SLI +Y G + A ++ M D++S T +I
Sbjct: 251 DERLG-TQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTII 309
Query: 306 SGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS 365
SG D+ +A + +K M + D+V + +L+ CA++ L++G ++H A +
Sbjct: 310 SGCV-DNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGH 368
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKK 425
V N+LIDMY+K I A F ++ DK+VISWTS+I G + EA+ ++K
Sbjct: 369 ILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRK 428
Query: 426 MKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYR----ILPRAEHFSCVVDLF 481
M + PN VT +S L AC+ G G E+ + LP A ++DL+
Sbjct: 429 MILKSK-PNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNA-----ILDLY 482
Query: 482 ARRGQLESAYNMIRQMNIKPTASLWSAIL 510
R G++ +A N +N K + W+ +L
Sbjct: 483 VRCGRMRTALNQF-NLNEKDVGA-WNILL 509
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 188/583 (32%), Positives = 321/583 (55%), Gaps = 4/583 (0%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPSTY--MSLLQFCIDKKAERQAHLIHAHIITN 59
+I+ A+ G+ +AL + ++ +TY +S LQ C + IHA I+ +
Sbjct: 221 SIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKS 280
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
+ +++++S +I YA G + A + F M ++ VSW ++SG QN +A+ F
Sbjct: 281 NHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHF 340
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
M SG + +Q + + + A R L G + K N+ + ++L+D+Y KC
Sbjct: 341 QDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKC 400
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
++ FE + KD++SW +I G A + D+ L R + + M D +GSIL
Sbjct: 401 CCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSIL 460
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
A G I +IH ++K GL + + ++++VY + + A ++ S+ DI+
Sbjct: 461 LACSGLKSEKLIKEIHGYVLKGGL-ADILIQNAIVNVYGELALVDYARHVFESINSKDIV 519
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
S T++I+ + + EA +LF +I + D + L +L A ++SL G++IH F
Sbjct: 520 SWTSMITCCVHN-GLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGF 578
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
+ + + N+L+DMYA+ G + +A F+ + +++I WTS+I HG G +A
Sbjct: 579 LIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDA 638
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD 479
I+L+ KM E ++P+ +TFL+LL+ACSH+GL EG + F M N+Y++ P EH++C+VD
Sbjct: 639 IDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVD 698
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVN 539
L AR LE AY+ +R M I+P+A +W A+LGAC I+ N LGE+AA+ L + E S N
Sbjct: 699 LLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTENSGN 758
Query: 540 YVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
YV++SN + A G W++ + R +M+ L+K PG S+++ K
Sbjct: 759 YVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENK 801
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 148/495 (29%), Positives = 267/495 (53%), Gaps = 12/495 (2%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD T+ +L+ C K R IH + GY + + +I YAK GD+ AR
Sbjct: 146 LDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVL 205
Query: 88 FDR--MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
FD M + + VSW ++IS + G AL +F M GV +N +T+ SAL+AC
Sbjct: 206 FDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPT 265
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
+++ GR I I K +++V +AL+ +YA CG +EDA +F+ + KD VSWN ++
Sbjct: 266 FIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLS 325
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
G+ D+ F+ M G KPD ++ +++ AS L+ ++H IK G++S
Sbjct: 326 GMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDS 385
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ + SLID+Y K ++ + M + D+IS T +I+G+A+++ H +A +L + +
Sbjct: 386 NMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECH-LDALNLLRKV 444
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
L+KM +D +++ +L C+ + S L ++IH + K + D + NA++++Y + +
Sbjct: 445 QLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGLA-DILIQNAIVNVYGELALV 503
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A F+ + K+++SWTS+I +G EA+EL+ + + P+ +T +S+L+A
Sbjct: 504 DYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAA 563
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA---YNMIRQMNIKPT 502
+ +G E+ +I K L S +VD++AR G +E+A +N ++Q ++
Sbjct: 564 AALSSLKKGKEIHGFLIRKGFFLEGLIANS-LVDMYARCGTMENARNIFNYVKQRDL--- 619
Query: 503 ASLWSAILGACSIYG 517
LW++++ A ++G
Sbjct: 620 -ILWTSMINANGMHG 633
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 169/566 (29%), Positives = 287/566 (50%), Gaps = 28/566 (4%)
Query: 13 LKQALK-----FSLSCPDTLLDP--STYMSLLQFCIDKKAERQAHLIHAHII-TNGYESN 64
LK+A + F+ P T P Y L+ C KA Q +HAH + T Y +
Sbjct: 22 LKEAFQSLTHFFTDPLPTTTRFPLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDS 81
Query: 65 LHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLR 124
+ L TK + Y K G A K FD+M ER + +W AMI G A+ ++ M
Sbjct: 82 VFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRV 141
Query: 125 SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIED 184
GV + FT+ L+AC + + G I G K + +FV +AL+ +YAKCG +
Sbjct: 142 LGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGG 201
Query: 185 AWILFER--IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS 242
A +LF+ +E+ D VSWN++I +G + ++ LFR M G++ + +T S L+A
Sbjct: 202 ARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQAC 261
Query: 243 VGGIELMKISQ-IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC 301
G +KI + IH +I+K + ++ +LI +YA G + A ++++SML D +S
Sbjct: 262 EGPT-FIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSW 320
Query: 302 TALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF 361
L+SG ++D +S +A + F+DM D V + M+ A+L G ++HA+A
Sbjct: 321 NTLLSGMVQNDMYS-DAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAI 379
Query: 362 KYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIE 421
K+ + +GN+LIDMY K + AF+ M +K++ISWT++IAGYA++ +A+
Sbjct: 380 KHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALN 439
Query: 422 LYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRI---LPRAEHFSCVV 478
L +K++ E M + + S+L ACS GL E I+ Y + L + +V
Sbjct: 440 LLRKVQLEKMDVDPMMIGSILLACS--GLKSEK---LIKEIHGYVLKGGLADILIQNAIV 494
Query: 479 DLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD--MEPEK 536
+++ ++ A ++ +N K S W++++ C G + A LF+ +E
Sbjct: 495 NVYGELALVDYARHVFESINSKDIVS-WTSMITCCVHNGLA----IEALELFNSLIETNI 549
Query: 537 SVNYVVLSNIYTAAGAWDNARKTRKL 562
+ + L ++ AA A + +K +++
Sbjct: 550 EPDLITLVSVLYAAAALSSLKKGKEI 575
>gi|449433319|ref|XP_004134445.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Cucumis sativus]
Length = 606
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 180/554 (32%), Positives = 309/554 (55%), Gaps = 3/554 (0%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHII-TNGYESNLHLSTKVIIFYAKVGDVLSA 84
L ++ S+++ + ++ HA I+ T L ++ YAK+ + SA
Sbjct: 2 PFLSQNSLASVVELAVSVRSSLLGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSA 61
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
+ + P R+VV+WTA+I+G QNG +ALL FS ML VR N FT+ L+A +
Sbjct: 62 KLILELAPCRSVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGL 121
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
R G+ + K + ++FV ++ D+Y+K G++ DA+ +F+ + +++ +WNA I
Sbjct: 122 RMDTTGKQLHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYI 181
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
+ G +DS F ++R G KPD T + L A + L Q+H II+ G
Sbjct: 182 SNSVLHGRPEDSVIAFIELLRVGGKPDSITFCAFLNACSDKLGLGPGCQLHGFIIRSGYG 241
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ ++ LID Y K G + + ++ M + + +S ++LI+ + + +N ++A LF
Sbjct: 242 QNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQ-NNEEEKASCLFLR 300
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
+ + D ++ +L CA ++ + GR + A A K + V +AL+DMY K G
Sbjct: 301 ARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGS 360
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKH-EGMVPNDVTFLSLLF 443
I +A +AF+ M ++N++SW +L+ GYA G+ ++A+ L ++M G+VP+ V+ + L
Sbjct: 361 IDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALS 420
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
ACS G G ++F M +Y + P EH++C+VDL R G +E AY+ I++M PT
Sbjct: 421 ACSRAGDLKTGMKIFESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTI 480
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
S+W A+LGAC ++G LG+LAA LF+++P+ S N+VVLSN++ A G W+ R M
Sbjct: 481 SIWGALLGACRMHGKPELGKLAAEKLFELDPKDSGNHVVLSNMFAATGRWEEVTVVRNEM 540
Query: 564 EERSLRKNPGYSFL 577
+E ++K G+S++
Sbjct: 541 KEVGIKKGAGFSWI 554
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 200/561 (35%), Positives = 303/561 (54%), Gaps = 16/561 (2%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHII-TNGYESNLHLSTKVIIFYAKVGDVLSA 84
+LL LL+ I + R ++HA I+ T L+ +I Y+K+ SA
Sbjct: 2 SLLSADALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESA 61
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
R P RNVVSWT++ISG AQNG+ AL+ F M R GV N FT+ A +A A +
Sbjct: 62 RLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASL 121
Query: 145 RWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
R G+ I +++ GR ++ +FV + D+Y K +DA LF+ I +++ +WNA
Sbjct: 122 RLPVTGKQIHALAVKCGRILD-VFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAF 180
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGL 263
I G ++ F R P+ T + L A + L Q+H L+++ G
Sbjct: 181 ISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGF 240
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF- 322
++ + LID Y K IRS+ ++ M + +S +L++ + + NH E +
Sbjct: 241 DTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQ--NHEDEKASVLY 298
Query: 323 ----KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDM 378
KD++ D ++ +L+ CA +A L LGR IHA A K VG+AL+DM
Sbjct: 299 LRSRKDIV----ETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDM 354
Query: 379 YAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGM--VPNDV 436
Y K G I D+ +AFDEM +KN+++ SLI GYA G A+ L+++M G PN +
Sbjct: 355 YGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYM 414
Query: 437 TFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQ 496
TF+SLL ACS G G ++F M + Y I P AEH+SC+VD+ R G +E AY I++
Sbjct: 415 TFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKK 474
Query: 497 MNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNA 556
M I+PT S+W A+ AC ++G LG LAA NLF ++P+ S N+V+LSN + AAG W A
Sbjct: 475 MPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEA 534
Query: 557 RKTRKLMEERSLRKNPGYSFL 577
R+ ++ ++K GYS++
Sbjct: 535 NTVREELKGVGIKKGAGYSWI 555
>gi|297829948|ref|XP_002882856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328696|gb|EFH59115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 753
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 195/579 (33%), Positives = 312/579 (53%), Gaps = 11/579 (1%)
Query: 9 KTGQLKQALKFSLSCPDT--LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ G +QA++ L D LD TY L FC ++ L+H ++ NG +
Sbjct: 126 QVGFYEQAMELFLEARDDNLKLDKFTYAGALGFCGERCDLDFGKLLHGLVVVNGLSQQVF 185
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
L +I Y+K G + A FDR ER+ VSW ++ISGY + G E L + + M R+G
Sbjct: 186 LINVLIDMYSKCGKLDQAMSLFDRCNERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRAG 245
Query: 127 VRANQFTYSSALRACA---RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIE 183
++ + S L+AC ++ G I K ++ V++ALLD+YAK G ++
Sbjct: 246 LKLTTYALGSVLKACCINLNEGLMEKGMAIHCYAAKLGMEFDIVVRTALLDMYAKNGSLK 305
Query: 184 DAWILFERIERKDVVSWNAMIGG-LAMQGFNDDS----FWLFRSMMRQGMKPDCFTLGSI 238
+A LF + K+VV++NAMI G L M D++ F LF M R+G++P T +
Sbjct: 306 EAIKLFSLMPAKNVVTYNAMISGFLQMDDITDEASSEAFKLFMEMQRRGLEPSPSTFSVV 365
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
L+A L QIH LI K +S + +LI++YA GS Q + S K DI
Sbjct: 366 LKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDI 425
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
S T++I +++ + AFDLF+ + + ++ + LM++ CA+ A+L+ G QI
Sbjct: 426 ASWTSIIDCHVQNE-QLESAFDLFRQLFSSPIRPEEYTVSLMMSACADFAALSSGEQIQG 484
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHE 418
+A K +V + I MYAKSG + AN+ F E+ + +V +++++I+ A+HG H+
Sbjct: 485 YAIKSGIDAYTSVKTSSISMYAKSGNMPLANKVFIEVQNPDVATYSAMISSLAQHGSAHD 544
Query: 419 AIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVV 478
A+ +++ MK G+ PN FL +L AC H GL G F M N Y I P +HF+C+
Sbjct: 545 ALNIFESMKTRGIKPNQQAFLGVLIACCHGGLVTHGVNYFQTMKNSYGINPNEKHFTCLA 604
Query: 479 DLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSV 538
DL R G+L A N+I + +W A+L +C +Y ++ +G+ A L ++EPE S
Sbjct: 605 DLLGRTGRLSDAENLILSSGFQDHPVMWRALLSSCRVYKDSVIGKRVAERLMELEPEASG 664
Query: 539 NYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
+YV+L NIY +G +A + R+LM +R ++K P S++
Sbjct: 665 SYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWI 703
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 150/523 (28%), Positives = 265/523 (50%), Gaps = 20/523 (3%)
Query: 10 TGQLKQALKF--SLSCP-DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
T Q+ +F SL P +T LD Y L Q + L H H++ + L+
Sbjct: 25 TKQVGLGYRFLSSLCQPKNTALDSEAYKKLFQTAAKSGSLVLGKLAHGHMVKSSLNPCLY 84
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
L ++ Y K ++ AR+ FDRMPERN++S+ ++ISGY Q G+ E A+ +F
Sbjct: 85 LLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQVGFYEQAMELFLEARDDN 144
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
++ ++FTY+ AL C L G+++ G + + +F+ + L+D+Y+KCG ++ A
Sbjct: 145 LKLDKFTYAGALGFCGERCDLDFGKLLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAM 204
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
LF+R +D VSWN++I G G ++ L M R G+K + LGS+L+A +
Sbjct: 205 SLFDRCNERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRAGLKLTTYALGSVLKACCINL 264
Query: 247 E---LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTA 303
+ K IH KLG+E + +L+D+YAK GS++ A +L+ M ++++ A
Sbjct: 265 NEGLMEKGMAIHCYAAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPAKNVVTYNA 324
Query: 304 LISGFAR----DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
+ISGF + D S EAF LF +M + + ++L C+ +L GRQIHA
Sbjct: 325 MISGFLQMDDITDEASSEAFKLFMEMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHAL 384
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
K D +G+ALI++YA G D + F +++ SWTS+I + ++ A
Sbjct: 385 ICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSIIDCHVQNEQLESA 444
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV-- 477
+L++++ + P + T ++ AC+ G + I Y I + ++ V
Sbjct: 445 FDLFRQLFSSPIRPEEYTVSLMMSACADFAALSSG-----EQIQGYAIKSGIDAYTSVKT 499
Query: 478 --VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
+ ++A+ G + A + ++ P + +SA++ + + +G+
Sbjct: 500 SSISMYAKSGNMPLANKVFIEVQ-NPDVATYSAMISSLAQHGS 541
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 195/602 (32%), Positives = 312/602 (51%), Gaps = 43/602 (7%)
Query: 15 QALKFS-LSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVII 73
Q L FS S P L+ ++LL C + +Q IH+ II G N H + +I
Sbjct: 12 QVLSFSDPSPPYKLVHDHPSLTLLSNCKTLQTLKQ---IHSQIIKTGLH-NTHFALSKLI 67
Query: 74 FYAKV---GDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
+ V GD+ A F + N V W MI G + + AL + M+ SG N
Sbjct: 68 EFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPN 127
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG---------- 180
++T+ S ++C ++R G+ + + K N FV ++L+++YA+ G
Sbjct: 128 EYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFD 187
Query: 181 ---------------------WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWL 219
++++A LF+ I +DVVSWNAMI G A G +++
Sbjct: 188 KSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAF 247
Query: 220 FRSMMRQGMKPDCFTLGSILRASV-GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYA 278
F M R + P+ T+ S+L A G L + + I GL S+ +L LID+Y
Sbjct: 248 FEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYV 307
Query: 279 KYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILC 338
K G + A L+ + +++S +I G+ + KEA LF+ M+ + +DV
Sbjct: 308 KCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCY-KEALGLFRRMMQSNIDPNDVTFL 366
Query: 339 LMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG--NALIDMYAKSGEIADANRAFDEMG 396
+L CAN+ +L+LG+ +HA+ K S V +LIDMYAK G++A A R FD M
Sbjct: 367 SILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMN 426
Query: 397 DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWE 456
K++ +W ++I+G+A HG+ A+ L+ +M EG VP+D+TF+ +L AC H GL G
Sbjct: 427 TKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRR 486
Query: 457 LFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIY 516
F+ MI Y++ P+ H+ C++DLF R G + A +++ M +KP ++W ++LGAC I+
Sbjct: 487 YFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIH 546
Query: 517 GNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSF 576
L E A++LF++EPE YV+LSNIY AG W++ K R + + ++K PG S
Sbjct: 547 RRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSS 606
Query: 577 LQ 578
++
Sbjct: 607 IE 608
>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 197/627 (31%), Positives = 327/627 (52%), Gaps = 81/627 (12%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
+ LLQ C +Q IH+ II G + L+ +V+ YA G V A++ F+ P
Sbjct: 37 FNDLLQQCSKSHLSQQ---IHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSP 93
Query: 93 ER---NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG 149
N++ W +++ +GY E AL ++ M + GV A+ FT+ +RACA M +
Sbjct: 94 IECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKL 153
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
R + G + + F NL V + L+ +Y K G ++DA +FER+ + VSWN M+ G A+
Sbjct: 154 CRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYAL 213
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSIL--RASVGG-IELMKI--------------- 251
+ +FR M G++P+ T S+L A G +E M++
Sbjct: 214 NYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEA 273
Query: 252 -----------------SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY---- 290
IH ++K G E+ + SLI +Y K+G++ +A L+
Sbjct: 274 LAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIK 333
Query: 291 -----------------------------------RSMLKTDIISCTALISGFARDDNHS 315
M++ +++S +A+I GFA
Sbjct: 334 TKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFA-SKGQG 392
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNAL 375
+EA +LF+ M L K+ + V + +L++CA +A+L+LGR+IH + + VGN L
Sbjct: 393 EEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGL 452
Query: 376 IDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND 435
I+MY KSG + N F+++ +K++ISW +++AGY HG G AI + +M +G P+
Sbjct: 453 INMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDG 512
Query: 436 VTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIR 495
VTF+++L ACSH GL EG ELF MI ++R+ P+ EH++C+VDL R G L+ A +++
Sbjct: 513 VTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVK 572
Query: 496 QMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDN 555
M ++P A +W A+L +C ++ NT + E A +F++ E + +Y++LSNIY A+G W++
Sbjct: 573 SMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWED 632
Query: 556 ARKTRKLMEERSLRKNPGYSFLQSSKK 582
+ K R + + L+K PG S++Q KK
Sbjct: 633 SAKVRISAKTKGLKKTPGQSWIQVKKK 659
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 124/490 (25%), Positives = 213/490 (43%), Gaps = 91/490 (18%)
Query: 2 NIVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
+I+RAN G ++AL+ + D T+ +++ C + + +H H++
Sbjct: 105 SILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEM 164
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYD------- 112
G++ NLH+ +++ Y K+G + ARK F+RM R+ VSW M+SGYA N YD
Sbjct: 165 GFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALN-YDCHGASEM 223
Query: 113 ---------ENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG-------------- 149
E L+ ++++L S R Q + L RMR +
Sbjct: 224 FRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVD 283
Query: 150 ------GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
G++I G + KG F LFVK++L+ LY K G + A ILF I+ K++VSWNA+
Sbjct: 284 LAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNAL 343
Query: 204 ---------------------------------------IGGLAMQGFNDDSFWLFRSMM 224
IGG A +G +++ LFR M
Sbjct: 344 ISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQ 403
Query: 225 RQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS-LIDVYAKYGSI 283
+K + T+ S+L L +IH +++ L N L G+ LI++Y K GS
Sbjct: 404 LAKVKANSVTIASVLSVCAELAALHLGREIHGHVVR-SLMDGNILVGNGLINMYTKSGSF 462
Query: 284 RSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNI 343
+ ++ + D+IS +++G+ + A F MI D V +L+
Sbjct: 463 KEGNLVFEKIENKDLISWNTMVAGYG-IHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSA 521
Query: 344 CANVASLNLGRQ-----IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-D 397
C++ + GR+ I F + Q + A ++D+ ++G + +A++ M +
Sbjct: 522 CSHAGLVAEGRELFDKMIKEFRVEPQMEHYA----CMVDLLGRAGLLQEASKVVKSMPVE 577
Query: 398 KNVISWTSLI 407
N W +L+
Sbjct: 578 PNACVWGALL 587
>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Vitis vinifera]
Length = 732
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 182/533 (34%), Positives = 297/533 (55%), Gaps = 13/533 (2%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HA +I G+ S++ L+ ++ Y K G V A+ F+ M R+V+SW +++SGYAQ G
Sbjct: 168 LHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGN 227
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
L + M G+ +Q T+ S + A A L G+M+ G I + ++ ++++
Sbjct: 228 IREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETS 287
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+ +Y KCG + A+ +FE + KDV+SW AMI GL D + +FR M++ + P
Sbjct: 288 LIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPS 347
Query: 232 CFTLGSILRA--SVGGIELMKISQIHDLI----IKLGLESSNKLTGSLIDVYAKYGSIRS 285
T+ S+L A +G L + +H I IKL + S N SL+ +YAK G +
Sbjct: 348 TATIASVLAACAELGSFPLG--TSVHGYILRQRIKLDIPSQN----SLVTMYAKCGHLEQ 401
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
+ ++ M + DI+S A++SG A++ H +A LF +M + D + + +L CA
Sbjct: 402 SCSVFDRMSRRDIVSWNAIVSGHAQN-GHLCKALLLFNEMRKARQRPDSITVVSLLQACA 460
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
++ +L+ G+ IH F K + AL+DMY+K G++ A + FD M ++++SW+S
Sbjct: 461 SIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSS 520
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
+IAGY HG G A+ +Y H G+ PN V +LS+L ACSH GL +G F M +
Sbjct: 521 IIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDF 580
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
I PR EH +C+VDL +R G++E AY+ ++M KP+ + +L AC GN LG++
Sbjct: 581 GIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIV 640
Query: 526 ARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
AR + ++P + NYV L++ Y + WD + M+ L+K PG+SF++
Sbjct: 641 AREIVILKPANAGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIE 693
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 159/531 (29%), Positives = 283/531 (53%), Gaps = 10/531 (1%)
Query: 20 SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVG 79
S+ DT D T+ SL++ C H +I +GY S+ +++T +I FY+K G
Sbjct: 38 SMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINFYSKFG 97
Query: 80 DVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALR 139
SARK FD M +RNVV WT MI Y + G + A +++ M R G++ + T L
Sbjct: 98 HNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLLS 157
Query: 140 ACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS 199
+ LQ + + + F ++ + +++L++Y KCG +EDA LFE ++ +DV+S
Sbjct: 158 GVLELVHLQ---CLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVIS 214
Query: 200 WNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLII 259
WN+++ G A G + L M G++PD T GS++ A+ +L +H I+
Sbjct: 215 WNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHIL 274
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
+ GLE + + SLI +Y K G++ SA++++ M+ D+IS TA+ISG ++D + A
Sbjct: 275 RAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDC-ADMAV 333
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMY 379
+F+ M+ ++ + +L CA + S LG +H + + + D N+L+ MY
Sbjct: 334 TVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMY 393
Query: 380 AKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFL 439
AK G + + FD M ++++SW ++++G+A++G+ +A+ L+ +M+ P+ +T +
Sbjct: 394 AKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVV 453
Query: 440 SLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
SLL AC+ G +G + + + K + P + +VD++++ G L SA +M
Sbjct: 454 SLLQACASIGALHQG-KWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQ 512
Query: 500 KPTASLWSAILGACSIYGNTSLGELAARNLFD-MEPEKSVNYVVLSNIYTA 549
+ S WS+I+ YG+ GE A R D + N+V+ +I +A
Sbjct: 513 QDLVS-WSSIIAG---YGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSA 559
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 211/407 (51%), Gaps = 18/407 (4%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDP--STYMSLLQFCIDKKAERQAHLIHAHIITN 59
++V + G +++ L+ + ++P T+ SL+ + ++H HI+
Sbjct: 217 SLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRA 276
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G E + H+ T +I Y K G+V SA + F+ M ++V+SWTAMISG QN + A+ VF
Sbjct: 277 GLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVF 336
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
ML+S V + T +S L ACA + G + G I + R ++ +++L+ +YAKC
Sbjct: 337 RRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKC 396
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G +E + +F+R+ R+D+VSWNA++ G A G + LF M + +PD T+ S+L
Sbjct: 397 GHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLL 456
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
+A L + IH+ + K L + +L+D+Y+K G + SA + + M + D++
Sbjct: 457 QACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLV 516
Query: 300 SCTALISGFARDDNHSK--EAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
S +++I+G+ +H K A ++ D + + + VI +L+ C++ ++ G
Sbjct: 517 SWSSIIAGYG---SHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQG---- 569
Query: 358 AFAFKYQSSYDAAVGNAL------IDMYAKSGEIADANRAFDEMGDK 398
+F + + D + L +D+ +++G + +A + M K
Sbjct: 570 -LSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPK 615
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 210/413 (50%), Gaps = 6/413 (1%)
Query: 98 SWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSI 157
S+ A+I+ + G + LL +S+ML + + T+ S ++AC + G +
Sbjct: 15 SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74
Query: 158 QKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSF 217
+ + ++ ++L++ Y+K G + A +F+ ++ ++VV W MIG G +D +F
Sbjct: 75 IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAF 134
Query: 218 WLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVY 277
++ M RQG++P T+ +L G +EL+ + +H +I+ G S L S+++VY
Sbjct: 135 SMYNIMRRQGIQPSSVTMLGLLS---GVLELVHLQCLHACVIQYGFGSDVALANSMLNVY 191
Query: 278 AKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVIL 337
K G + A L+ M D+IS +L+SG+A+ N +E L M + D
Sbjct: 192 CKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGN-IREVLQLLIRMKTDGIEPDQQTF 250
Query: 338 CLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD 397
+++ A + L +G+ +H + D+ + +LI MY K G + A R F+ M
Sbjct: 251 GSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMH 310
Query: 398 KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWEL 457
K+VISWT++I+G ++ A+ ++++M ++P+ T S+L AC+ G G +
Sbjct: 311 KDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSV 370
Query: 458 FTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
I + RI + +V ++A+ G LE + ++ +M+ + S W+AI+
Sbjct: 371 H-GYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVS-WNAIV 421
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 187/551 (33%), Positives = 301/551 (54%), Gaps = 5/551 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
+ STY + + +R +IH + +G +S L L + ++ Y K V ARK F
Sbjct: 118 NSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVF 177
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAML-RSGVRANQFTYSSALRACARMRWL 147
DRMPE++ + W MISGY +N ++ VF ++ S R + T L A A ++ L
Sbjct: 178 DRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQEL 237
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G I K + +V + + LY+KCG I+ LF + D+V++NAMI G
Sbjct: 238 RLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGY 297
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
G + S LF+ +M G + TL S++ V G LM I IH +K S
Sbjct: 298 TSNGETELSLSLFKELMLSGARLRSSTLVSLV--PVSG-HLMLIYAIHGYCLKSNFLSHA 354
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
++ +L VY+K I SA +L+ + + S A+ISG+ ++ +++A LF++M
Sbjct: 355 SVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQN-GLTEDAISLFREMQK 413
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ + V + +L+ CA + +L+LG+ +H V ALI MYAK G IA+
Sbjct: 414 SEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAE 473
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A R FD M KN ++W ++I+GY HG G EA+ ++ +M + G+ P VTFL +L+ACSH
Sbjct: 474 ARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSH 533
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
GL EG E+F MI++Y P +H++C+VD+ R G L+ A I M+I+P +S+W
Sbjct: 534 AGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWE 593
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
+LGAC I+ +T+L + LF+++P+ +V+LSNI++A + A R+ ++R
Sbjct: 594 TLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRK 653
Query: 568 LRKNPGYSFLQ 578
L K PGY+ ++
Sbjct: 654 LAKAPGYTLIE 664
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 136/511 (26%), Positives = 247/511 (48%), Gaps = 20/511 (3%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHL--IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
L+ +TY+ K++ +HL HA II +G+ +++ L TK+ + +G + A
Sbjct: 17 LISKNTYLDFF-----KRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYA 71
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS-GVRANQFTYSSALRACAR 143
R F + +V + ++ G++ N ++L VF+ + +S ++ N TY+ A+ A +
Sbjct: 72 RDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASG 131
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
R + GR+I G L + S ++ +Y K +EDA +F+R+ KD + WN M
Sbjct: 132 FRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTM 191
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQG-MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
I G +S +FR ++ + + D TL IL A EL QIH L K G
Sbjct: 192 ISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTG 251
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
S + + I +Y+K G I+ L+R K DI++ A+I G+ + ++ + LF
Sbjct: 252 CYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYT-SNGETELSLSLF 310
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
K+++L + L ++ + + L L IH + K A+V AL +Y+K
Sbjct: 311 KELMLSGARLRSSTLVSLVPVSGH---LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKL 367
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
EI A + FDE +K++ SW ++I+GY ++G +AI L+++M+ PN VT +L
Sbjct: 368 NEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCIL 427
Query: 443 FACSHTG-LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
AC+ G L+ W D++ + ++ ++A+ G + A + M K
Sbjct: 428 SACAQLGALSLGKW--VHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKN 485
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDM 532
+ W+ ++ ++G G+ A ++M
Sbjct: 486 EVT-WNTMISGYGLHGQ---GQEALNIFYEM 512
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 185/400 (46%), Gaps = 20/400 (5%)
Query: 22 SCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDV 81
SC T LD +T + +L + + R IH+ G S+ ++ T I Y+K G +
Sbjct: 215 SC--TRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKI 272
Query: 82 LSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC 141
F + ++V++ AMI GY NG E +L +F ++ SG R T S +
Sbjct: 273 KMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVS 332
Query: 142 ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN 201
+ + I G K F+ + V +AL +Y+K IE A LF+ K + SWN
Sbjct: 333 GHLMLIYA---IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWN 389
Query: 202 AMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLII 259
AMI G G +D+ LFR M + P+ T+ IL A +G + L K +HDL+
Sbjct: 390 AMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGK--WVHDLVR 447
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
ESS ++ +LI +YAK GSI A +L+ M K + ++ +ISG+ +EA
Sbjct: 448 STDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGL-HGQGQEAL 506
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQ-----IHAFAFKYQSSYDAAVGNA 374
++F +M+ + V +L C++ + G + IH + F+ + A
Sbjct: 507 NIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYA----C 562
Query: 375 LIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKH 413
++D+ ++G + A + + M + W +L+ H
Sbjct: 563 MVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIH 602
>gi|15227623|ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03380, mitochondrial; Flags: Precursor
gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis thaliana]
gi|330250600|gb|AEC05694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 183/553 (33%), Positives = 315/553 (56%), Gaps = 7/553 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D + L+ C + + IH ++ N+ L T ++ YAK G++ SA K F
Sbjct: 141 DDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVL-TGLLDMYAKCGEIKSAHKVF 199
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ + RNVV WT+MI+GY +N E L++F+ M + V N++TY + + AC ++ L
Sbjct: 200 NDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALH 259
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ G + K + + ++LLD+Y KCG I +A +F D+V W AMI G
Sbjct: 260 QGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYT 319
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSN 267
G +++ LF+ M +KP+C T+ S+L + G IE +++ + +H L IK+G+ +N
Sbjct: 320 HNGSVNEALSLFQKMKGVEIKPNCVTIASVL-SGCGLIENLELGRSVHGLSIKVGIWDTN 378
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ +L+ +YAK R A ++ + DI++ ++ISGF+++ + EA LF M
Sbjct: 379 -VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGS-IHEALFLFHRMNS 436
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK--YQSSYDAAVGNALIDMYAKSGEI 385
+ + + V + + + CA++ SL +G +HA++ K + +S VG AL+D YAK G+
Sbjct: 437 ESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDP 496
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A FD + +KN I+W+++I GY K G ++EL+++M + PN+ TF S+L AC
Sbjct: 497 QSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSAC 556
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
HTG+ EG + F+ M Y P +H++C+VD+ AR G+LE A ++I +M I+P
Sbjct: 557 GHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRC 616
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
+ A L C ++ LGE+ + + D+ P+ + YV++SN+Y + G W+ A++ R LM++
Sbjct: 617 FGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQ 676
Query: 566 RSLRKNPGYSFLQ 578
R L K G+S ++
Sbjct: 677 RGLSKIAGHSTME 689
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 155/556 (27%), Positives = 282/556 (50%), Gaps = 18/556 (3%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
LL C + + RQ+H + + NG ++ ++TK++ Y G AR FD++PE +
Sbjct: 50 LLSKCTNIDSLRQSHGV---LTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG 155
W M+ Y N + ++ +++ G R + +S AL+AC ++ L G+ I
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD 215
+ K +N+ V + LLD+YAKCG I+ A +F I ++VV W +MI G ++
Sbjct: 167 QLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEE 225
Query: 216 SFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLID 275
LF M + + +T G+++ A L + H ++K G+E S+ L SL+D
Sbjct: 226 GLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLD 285
Query: 276 VYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDV 335
+Y K G I +A +++ D++ TA+I G+ + + EA LF+ M ++ + V
Sbjct: 286 MYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGS-VNEALSLFQKMKGVEIKPNCV 344
Query: 336 ILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEM 395
+ +L+ C + +L LGR +H + K +D V NAL+ MYAK + DA F+
Sbjct: 345 TIASVLSGCGLIENLELGRSVHGLSIKV-GIWDTNVANALVHMYAKCYQNRDAKYVFEME 403
Query: 396 GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGW 455
+K++++W S+I+G++++G HEA+ L+ +M E + PN VT SL AC+ G G
Sbjct: 404 SEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGS 463
Query: 456 ELFTDMINKYRILPRAEHF-SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACS 514
L + + + H + ++D +A+ G +SA + + K T + WSA++G
Sbjct: 464 SLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTIT-WSAMIGGYG 522
Query: 515 IYGNTSLGELAARNLFD--MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNP 572
G+T + + LF+ ++ ++ N ++I +A G + +K S+ K+
Sbjct: 523 KQGDT----IGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFS--SMYKD- 575
Query: 573 GYSFLQSSKKNILLLE 588
Y+F S+K +++
Sbjct: 576 -YNFTPSTKHYTCMVD 590
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 199/555 (35%), Positives = 313/555 (56%), Gaps = 12/555 (2%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ +L+ C R IHAH G ++L +ST +I Y + AR F +M
Sbjct: 102 TFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKM 161
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAML-RSGVRANQFTYSSALRACARMRWLQGG 150
P R+VV+W AM++GYA +G +A+ M G+R N T S L A+ L G
Sbjct: 162 PMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQG 221
Query: 151 RMIQGSIQKGRFVEN---LFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
I + +N + + +ALLD+YAKC + A +F + ++ V+W+A+IGG
Sbjct: 222 TSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGF 281
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCF----TLGSILRASVGGIELMKISQIHDLIIKLGL 263
+ ++F LF+ M+ +G+ CF ++ S LR +L +Q+H LI K G+
Sbjct: 282 VLCDRMTEAFNLFKDMLVEGL---CFLSATSVASALRVCASLADLHMGTQLHALIAKSGI 338
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
+ + SL+ +YAK G I A + + D IS AL+SG ++ ++EAF +FK
Sbjct: 339 HADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQN-GKAEEAFLVFK 397
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
M M D + ++ C+++A+L G+ H + + ++ N+LIDMYAK G
Sbjct: 398 KMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCG 457
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
+I + + FD+M ++V+SW ++IAGY HG G EA L+ MK++G P+DVTF+ L+
Sbjct: 458 KIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIA 517
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
ACSH+GL EG F M +KY ILPR EH+ C+VDL AR G L+ AY I+ M +K
Sbjct: 518 ACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADV 577
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
+W A+LGAC I+ N LG+ +R + + PE + N+V+LSNI++AAG +D A + R +
Sbjct: 578 RVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQ 637
Query: 564 EERSLRKNPGYSFLQ 578
+ + +K+PGYS+++
Sbjct: 638 KVKGFKKSPGYSWIE 652
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/444 (30%), Positives = 237/444 (53%), Gaps = 8/444 (1%)
Query: 79 GDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSAL 138
G + AR+ FDR+P + ++ A+I Y+ G A+ ++ +MLR V N++T+ L
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 139 RACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVV 198
+AC+ + L+ GR I +LFV +AL+DLY +C A +F ++ +DVV
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 199 SWNAMIGGLAMQGFNDDSFWLFRSMMRQ-GMKPDCFTLGSILRASVGGIELMKISQIHDL 257
+WNAM+ G A G + M G++P+ TL S+L L + + IH
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227
Query: 258 IIKLGLESSNK--LTGS-LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH 314
++ LE + + L G+ L+D+YAK + A +++ M + ++ +ALI GF D
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287
Query: 315 SKEAFDLFKDMILKKMG-IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN 373
+ EAF+LFKDM+++ + + + L +CA++A L++G Q+HA K D N
Sbjct: 288 T-EAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASN 346
Query: 374 ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP 433
+L+ MYAK+G I +A FDE+ K+ IS+ +L++G ++G EA ++KKM+ M P
Sbjct: 347 SLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEP 406
Query: 434 NDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNM 493
+ T +SL+ ACSH G +I + L + ++D++A+ G+++ + +
Sbjct: 407 DIATMVSLIPACSHLAALQHGKCSHGSVIIRGLAL-ETSICNSLIDMYAKCGKIDLSRQV 465
Query: 494 IRQMNIKPTASLWSAILGACSIYG 517
+M + S W+ ++ I+G
Sbjct: 466 FDKMPARDVVS-WNTMIAGYGIHG 488
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 151/312 (48%), Gaps = 11/312 (3%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L ++ S L+ C +HA I +G ++L S ++ YAK G + A
Sbjct: 304 FLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATM 363
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FD + ++ +S+ A++SG QNG E A LVF M + + T S + AC+ +
Sbjct: 364 FFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAA 423
Query: 147 LQGGRMIQGS-IQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
LQ G+ GS I +G +E S L+D+YAKCG I+ + +F+++ +DVVSWN MI
Sbjct: 424 LQHGKCSHGSVIIRGLALETSICNS-LIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIA 482
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLE 264
G + G ++ LF M QG PD T ++ A S G+ + K G+
Sbjct: 483 GYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGIL 542
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALISGFARDDNHSKEAFDLFK 323
+ ++D+ A+ G + AYQ +SM LK D+ AL+ N DL K
Sbjct: 543 PRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKN-----IDLGK 597
Query: 324 DM--ILKKMGID 333
+ I++K+G +
Sbjct: 598 QVSRIIQKLGPE 609
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 167/369 (45%), Gaps = 8/369 (2%)
Query: 173 LDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDC 232
L+ + G + A +F+RI D ++NA+I + G + L+RSM+R + P+
Sbjct: 41 LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100
Query: 233 FTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRS 292
+T +L+A ++L IH GL + ++ +LID+Y + A ++
Sbjct: 101 YTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAK 160
Query: 293 MLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNL 352
M D+++ A+++G+A + L + + L +L + A +L
Sbjct: 161 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQ 220
Query: 353 GRQIHAFAFK---YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
G IHA+ + Q+ +G AL+DMYAK ++ A R F M +N ++W++LI G
Sbjct: 221 GTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGG 280
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFL-SLLFACSHTGLTCEGWELFTDMINKYRIL 468
+ EA L+K M EG+ T + S L C+ G +L +I K I
Sbjct: 281 FVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHA-LIAKSGIH 339
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARN 528
+ ++ ++A+ G + A ++ +K T S + A+L C G L +
Sbjct: 340 ADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTIS-YGALLSGCVQNGKAEEAFLVFKK 398
Query: 529 L--FDMEPE 535
+ +MEP+
Sbjct: 399 MQACNMEPD 407
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 185/562 (32%), Positives = 311/562 (55%), Gaps = 5/562 (0%)
Query: 29 DP--STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
DP +T L C + +H + G E + ++ ++ YAK + A +
Sbjct: 245 DPNFATLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWR 304
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
F MP ++V+W MISG QNG ++AL +F M +SG++ + T +S L A +
Sbjct: 305 LFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNG 364
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
+ G+ I G I + ++F+ SAL+D+Y KC + A +F+ + DVV + MI G
Sbjct: 365 FKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISG 424
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLES 265
+ ++ + +FR ++ G+KP+ + S L A + M+I Q +H ++K E
Sbjct: 425 YVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPA-CASMAAMRIGQELHGYVLKNAYEG 483
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ +L+D+Y+K G + ++ ++ M D ++ ++IS FA++ +EA DLF+ M
Sbjct: 484 RCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQN-GEPEEALDLFRQM 542
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
I++ + ++V + +L+ CA + ++ G++IH K D +ALIDMY K G +
Sbjct: 543 IMEGVKYNNVTISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNL 602
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A R F+ M +KN +SW S+I+ Y HG E+++L M+ EG + VTFL+L+ AC
Sbjct: 603 ELALRVFEHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISAC 662
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
+H G EG LF M +Y I P+ EH SC+VDL++R G+L+ A I M KP A +
Sbjct: 663 AHAGQVQEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAGI 722
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
W A+L AC ++ N L E+A++ LF ++P YV++SNI AG WD K R+LM++
Sbjct: 723 WGALLHACRVHRNVELAEIASQELFKLDPHNCGYYVLMSNINAVAGRWDGVSKMRRLMKD 782
Query: 566 RSLRKNPGYSFLQSSKKNILLL 587
+ ++K PGYS++ + + L +
Sbjct: 783 KKVQKIPGYSWVDVNNTSHLFV 804
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 145/491 (29%), Positives = 252/491 (51%), Gaps = 7/491 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T +++ C A L+H G + ++++ + +I YA G + AR+ F
Sbjct: 146 DGHTLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVF 205
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D M ER+ V W M+ GY + G +A+ +F M SG N T + L CA L
Sbjct: 206 DGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLL 265
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G + K + V + L+ +YAKC +E+AW LF + R D+V+WN MI G
Sbjct: 266 SGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCV 325
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G DD+ LF M + G++PD TL S+L A + +IH I++
Sbjct: 326 QNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVF 385
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
L +L+D+Y K +R A ++ + D++ + +ISG+ + S+ A +F+ ++
Sbjct: 386 LVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVL-NRMSEAAVKMFRYLLAL 444
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ + V++ L CA++A++ +G+++H + K V +AL+DMY+K G + +
Sbjct: 445 GIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLS 504
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ F +M K+ ++W S+I+ +A++G EA++L+++M EG+ N+VT S+L AC+
Sbjct: 505 HYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGL 564
Query: 449 GLTCEGWELFTDMINKYRILPRAEHF--SCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
G E+ +I K I RA+ F S ++D++ + G LE A + M K S W
Sbjct: 565 PAIYYGKEIH-GIIIKGPI--RADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVS-W 620
Query: 507 SAILGACSIYG 517
++I+ A +G
Sbjct: 621 NSIISAYGAHG 631
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 132/535 (24%), Positives = 250/535 (46%), Gaps = 23/535 (4%)
Query: 30 PSTY--MSLLQFCIDKKAERQAHLIHAHIITNGY-----ESNLHLSTKVIIFYA---KVG 79
P Y ++LL+ C+ IHA +T+G L T+++ Y +
Sbjct: 34 PCAYRLLALLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLARRFR 93
Query: 80 DVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML--RSGVRANQFTYSSA 137
D ++ + R + W +I G+ G+ A+L + M S R + T
Sbjct: 94 DAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYV 153
Query: 138 LRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDV 197
+++CA + L GR++ + + +++V SAL+ +YA G ++ A +F+ ++ +D
Sbjct: 154 VKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDC 213
Query: 198 VSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDL 257
V WN M+ G G + LFR M G P+ TL L +L+ Q+H L
Sbjct: 214 VLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTL 273
Query: 258 IIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKE 317
+K GLE + +L+ +YAK + A++L+ M + D+++ +ISG + + +
Sbjct: 274 AVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQ-NGLVDD 332
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
A LF DM + D V L +L + G++IH + + + D + +AL+D
Sbjct: 333 ALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVD 392
Query: 378 MYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVT 437
+Y K ++ A FD +V+ +++I+GY + A+++++ + G+ PN V
Sbjct: 393 IYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVM 452
Query: 438 FLSLLFACSHTGLTCEGWELFTDMI-NKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQ 496
S L AC+ G EL ++ N Y R S ++D++++ G+L+ ++ M +
Sbjct: 453 VASTLPACASMAAMRIGQELHGYVLKNAYE--GRCYVESALMDMYSKCGRLDLSHYMFSK 510
Query: 497 MNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNY--VVLSNIYTA 549
M+ K + W++++ + + G A +LF + V Y V +S+I +A
Sbjct: 511 MSAKDEVT-WNSMISSFAQNGEPE----EALDLFRQMIMEGVKYNNVTISSILSA 560
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 198/399 (49%), Gaps = 4/399 (1%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNG 60
++ + G + AL+ + L P T SLL + +Q IH +I+ N
Sbjct: 320 MISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNC 379
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
++ L + ++ Y K DV A+ FD +VV + MISGY N E A+ +F
Sbjct: 380 AHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFR 439
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
+L G++ N +S L ACA M ++ G+ + G + K + +V+SAL+D+Y+KCG
Sbjct: 440 YLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCG 499
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
++ + +F ++ KD V+WN+MI A G +++ LFR M+ +G+K + T+ SIL
Sbjct: 500 RLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILS 559
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
A G + +IH +IIK + + +LID+Y K G++ A +++ M + + +S
Sbjct: 560 ACAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVS 619
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG-RQIHAF 359
++IS + KE+ DL M + D V +++ CA+ + G R
Sbjct: 620 WNSIISAYGA-HGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCM 678
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK 398
+Y + ++D+Y+++G++ A + +M K
Sbjct: 679 TEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPFK 717
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 183/498 (36%), Positives = 287/498 (57%), Gaps = 20/498 (4%)
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
NV SW ++I+ A+ G AL FS++ + G+ + ++ +++C+ + L GRM
Sbjct: 1106 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 1165
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND 214
F +LFV SAL+D+Y+KCG ++DA LF+ I ++VVSW +MI G D
Sbjct: 1166 QQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQAD 1225
Query: 215 DSFWLFRSMMRQ--------GMKPDCFTLGSIL----RASVGGIELMKISQIHDLIIKLG 262
++ LF+ + + + D + S+L R S GI +H ++K G
Sbjct: 1226 NALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGI----TEGVHGFVVKKG 1281
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
+ S + +L+D YAK G + +++ M + D IS ++I+ +A+ S EA ++F
Sbjct: 1282 FDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQS-GLSGEALEVF 1340
Query: 323 KDMILKKMGI--DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYA 380
M+ + +G+ + V L +L CA+ +L G+ IH K Y+ VG ++IDMY
Sbjct: 1341 HGMV-RHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYC 1399
Query: 381 KSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
K G + A + FD M +KNV SWT+++AGY HG EA++++ KM G+ PN +TF+S
Sbjct: 1400 KCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVS 1459
Query: 441 LLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIK 500
+L ACSH GL EGW F M +KY I P EH+ C+VDLF R G L AYN+I++M +K
Sbjct: 1460 VLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMK 1519
Query: 501 PTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTR 560
P +W ++LGAC I+ N LGE+AA+ LF+++P+ YV+LSN+Y AG W + + R
Sbjct: 1520 PDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMR 1579
Query: 561 KLMEERSLRKNPGYSFLQ 578
LM+ R L K PG+S ++
Sbjct: 1580 MLMKNRQLVKPPGFSLVE 1597
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 196/407 (48%), Gaps = 41/407 (10%)
Query: 124 RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIE 183
R +RA + + L+ C + L R I I + + + L+ LY+ G I
Sbjct: 22 RGNIRAKKALF--LLQNCKNFKHL---RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIA 76
Query: 184 DAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV 243
A +LF +I+ +WN +I + G ++ + L+++M+ QG+ D FT +++A
Sbjct: 77 YAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACT 136
Query: 244 G--GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM-------- 293
I+L K+ +H +IK G + +LID Y K G R A +++ M
Sbjct: 137 NFLSIDLGKV--VHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSW 194
Query: 294 --LKTDIISC---------------------TALISGFARDDNHSKEAFDLFKDMILKKM 330
+ + +ISC TA+I+G+ R+ +EA +LFK M + +
Sbjct: 195 TTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRN-QQPEEALELFKRMQAENI 253
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
++ + ++ C + L LGR IH +A K +G ALIDMY+K G I DA
Sbjct: 254 FPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIE 313
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
F+ M K++ +W S+I HG G EA+ L+ +M+ + P+ +TF+ +L AC H
Sbjct: 314 VFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKN 373
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
EG FT M Y I P EH+ C+ +L+AR L+ A+ +++
Sbjct: 374 VKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEV 420
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 187/372 (50%), Gaps = 12/372 (3%)
Query: 53 HAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYD 112
H G+E++L +S+ +I Y+K G + AR FD +P RNVVSWT+MI+GY QN
Sbjct: 1165 HQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQA 1224
Query: 113 ENALLVFSAMLR--------SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVE 164
+NALL+F L + V + S L AC+R+ + G + K F
Sbjct: 1225 DNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDG 1284
Query: 165 NLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMM 224
++ V + L+D YAKCG + +F+ +E KD +SWN+MI A G + ++ +F M+
Sbjct: 1285 SIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMV 1344
Query: 225 RQ-GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
R G++ + TL ++L A L IHD +IK+ LE + + S+ID+Y K G +
Sbjct: 1345 RHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRV 1404
Query: 284 RSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNI 343
A + + M + ++ S TA+++G+ +KEA D+F M+ + + + +L
Sbjct: 1405 EMAKKTFDRMKEKNVKSWTAMVAGYGM-HGRAKEALDIFYKMVRAGVKPNYITFVSVLAA 1463
Query: 344 CANVASLNLG-RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK-NVI 401
C++ + G +A KY ++D++ ++G + +A M K + +
Sbjct: 1464 CSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFV 1523
Query: 402 SWTSLIAGYAKH 413
W SL+ H
Sbjct: 1524 VWGSLLGACRIH 1535
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 147/275 (53%), Gaps = 3/275 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD +S+L C + +H ++ G++ ++ + ++ YAK G L ++K
Sbjct: 1249 LDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKV 1308
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS-GVRANQFTYSSALRACARMRW 146
FD M E++ +SW +MI+ YAQ+G AL VF M+R GVR N T S+ L ACA
Sbjct: 1309 FDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGA 1368
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
L+ G+ I + K N+ V ++++D+Y KCG +E A F+R++ K+V SW AM+ G
Sbjct: 1369 LRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAG 1428
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLES 265
M G ++ +F M+R G+KP+ T S+L A S G+ + + K +E
Sbjct: 1429 YGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEP 1488
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDII 299
+ G ++D++ + G + AY L + M +K D +
Sbjct: 1489 GIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFV 1523
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 177/339 (52%), Gaps = 12/339 (3%)
Query: 188 LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIE 247
++ +++ +V SWN++I LA G + ++ F S+ + G+ P + +++ +
Sbjct: 1098 FYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCD 1157
Query: 248 LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG 307
L+ H G E+ ++ +LID+Y+K G ++ A L+ + +++S T++I+G
Sbjct: 1158 LVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITG 1217
Query: 308 FARDDNHSKEAFDLFKDMILKKMGIDD--------VILCLMLNICANVASLNLGRQIHAF 359
+ +++ + A LFKD + ++ ++D V++ +L+ C+ V+ + +H F
Sbjct: 1218 YVQNE-QADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGF 1276
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
K VGN L+D YAK G+ + + FD M +K+ ISW S+IA YA+ G EA
Sbjct: 1277 VVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEA 1336
Query: 420 IELYKKM-KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVV 478
+E++ M +H G+ N VT ++L AC+H G G + D + K + + ++
Sbjct: 1337 LEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAG-KCIHDQVIKMDLEYNVCVGTSII 1395
Query: 479 DLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
D++ + G++E A +M K S W+A++ ++G
Sbjct: 1396 DMYCKCGRVEMAKKTFDRMKEKNVKS-WTAMVAGYGMHG 1433
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 33/274 (12%)
Query: 3 IVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
I+RAN G +QAL ++ C D T+ +++ C + + ++H +I G
Sbjct: 96 IIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYG 155
Query: 61 YESNLHLSTKVIIFYAKVG-------------------------------DVLSARKAFD 89
+ ++ + +I FY K G D+ AR+ FD
Sbjct: 156 FSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFD 215
Query: 90 RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG 149
+P +NVVSWTAMI+GY +N E AL +F M + N++T S ++AC M L
Sbjct: 216 EIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTL 275
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
GR I K +++ +AL+D+Y+KCG I+DA +FE + RK + +WN+MI L +
Sbjct: 276 GRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGV 335
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV 243
G ++ LF M R +KPD T +L A V
Sbjct: 336 HGLGQEALNLFSEMERVNVKPDAITFIGVLCACV 369
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 190/396 (47%), Gaps = 42/396 (10%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
LLQ C + K RQ IHA II +G ++ L+ K+I Y+ G + A F ++
Sbjct: 33 LLQNCKNFKHLRQ---IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC 89
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG 155
+W +I NG E AL+++ M+ G+ A++FT+ ++AC + G+++ G
Sbjct: 90 TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG---- 211
S+ K F ++FV++ L+D Y KCG A +FE++ ++VVSW +I GL G
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQE 209
Query: 212 ----FN-----------------------DDSFWLFRSMMRQGMKPDCFTLGSILRASVG 244
F+ +++ LF+ M + + P+ +T+ S+++A
Sbjct: 210 ARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTE 269
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
L IHD IK +E L +LID+Y+K GSI+ A +++ +M + + + ++
Sbjct: 270 MGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSM 329
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
I+ +EA +LF +M + D + +L C ++ ++ G A+ +
Sbjct: 330 ITSLGV-HGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEG---CAYFTRMT 385
Query: 365 SSYDAAV----GNALIDMYAKSGEIADANRAFDEMG 396
Y A + ++YA+S + +A ++ E+G
Sbjct: 386 QHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEVG 421
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 168/404 (41%), Gaps = 75/404 (18%)
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR 310
+ QIH II+ GL + LT LI +Y+ +G I A L+ + + +I
Sbjct: 43 LRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRA-NT 101
Query: 311 DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA 370
+ S++A L+K+M+ + + D ++ C N S++LG+ +H KY S D
Sbjct: 102 INGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVF 161
Query: 371 VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA---------------------- 408
V N LID Y K G A + F++M +NV+SWT++I+
Sbjct: 162 VQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKN 221
Query: 409 ---------GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWEL-- 457
GY ++ EA+EL+K+M+ E + PN+ T +SL+ AC+ G+ G +
Sbjct: 222 VVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHD 281
Query: 458 --------------------------FTDMINKYRILPRA--EHFSCVVDLFARRGQLES 489
D I + +PR ++ ++ G +
Sbjct: 282 YAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQE 341
Query: 490 AYNMIRQM---NIKPTASLWSAILGACSIYGNTSLG-----ELAARNLFDMEPEKSVNYV 541
A N+ +M N+KP A + +L AC N G + PE +Y
Sbjct: 342 ALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPE---HYE 398
Query: 542 VLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKNIL 585
++ +Y + D A K+ K E SL +P F +K+ +L
Sbjct: 399 CMTELYARSNNLDEAFKSTK--EVGSLANSPSICFDARAKQAVL 440
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 97/177 (54%), Gaps = 2/177 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T ++L C A R IH +I E N+ + T +I Y K G V A+K FDRM
Sbjct: 1355 TLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRM 1414
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
E+NV SWTAM++GY +G + AL +F M+R+GV+ N T+ S L AC+ ++ G
Sbjct: 1415 KEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGW 1474
Query: 152 MIQGSIQKGRFVE-NLFVKSALLDLYAKCGWIEDAWILFERIERK-DVVSWNAMIGG 206
+++ +E + ++DL+ + G + +A+ L +R++ K D V W +++G
Sbjct: 1475 HWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGA 1531
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 5/128 (3%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T +SL++ C + IH + I N E ++L T +I Y+K G + A + F+ M
Sbjct: 259 TMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETM 318
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG- 150
P +++ +W +MI+ +G + AL +FS M R V+ + T+ L AC ++ ++ G
Sbjct: 319 PRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGC 378
Query: 151 ----RMIQ 154
RM Q
Sbjct: 379 AYFTRMTQ 386
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 187/572 (32%), Positives = 298/572 (52%), Gaps = 39/572 (6%)
Query: 15 QALKFSLSCPDTLLD----PSTYMSLLQFCIDKKAE-RQAHLIHAHIITNGYESNLHLST 69
Q K + S P LD P +L +D + + +H+ II+ N L
Sbjct: 20 QTRKVTSSVPKLELDQKNSPKETAFMLGQVLDTYPDLKTLRTVHSRIISEDLRYNSSLGV 79
Query: 70 KVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA 129
K++ YA + DV +ARK FD +PERNV+ MI Y NG+ + VF M V+
Sbjct: 80 KLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKP 139
Query: 130 NQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILF 189
+ +T+ L+AC+ + G+ I GS K LFV + L+ +Y KCG++ +A ++
Sbjct: 140 DHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVL 199
Query: 190 ERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELM 249
+ + R+DVVSWN+++ G A DD+ + R M + D T+ S+L A V
Sbjct: 200 DEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA-VSNTTTE 258
Query: 250 KISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFA 309
+ + D+ K+G K ++S +I G
Sbjct: 259 NVMYVKDMFFKMG--------------------------------KKSLVSWNVMI-GVY 285
Query: 310 RDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDA 369
+ EA +L+ M D V + +L C + ++L+LG++IH + + + +
Sbjct: 286 MKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNL 345
Query: 370 AVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE 429
+ NALIDMYAK G + A F+ M ++V+SWT++I+ Y G G +A+ L+ KM+
Sbjct: 346 LLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDS 405
Query: 430 GMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLES 489
G+VP+ + F++ L ACSH GL EG F M + Y+I PR EH +C+VDL R G+++
Sbjct: 406 GLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKE 465
Query: 490 AYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTA 549
AY I++M ++P +W A+LGAC ++ NT +G LAA LF + PE+S YV+LSNIY
Sbjct: 466 AYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLSNIYAK 525
Query: 550 AGAWDNARKTRKLMEERSLRKNPGYSFLQSSK 581
AG W+ R +M+ + L+KNPG S ++ ++
Sbjct: 526 AGRWEEVTNIRNIMKSKGLKKNPGASNVEVNR 557
>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 783
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 184/525 (35%), Positives = 289/525 (55%), Gaps = 1/525 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IH + ES+ + +I Y K +L AR+ FD M RN+VSWT MI+GY QN
Sbjct: 260 IHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSL 319
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
D A+ +F + ++G + + F +S L +C + + GR + + K + +VK+A
Sbjct: 320 DTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNA 379
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+D+YAKC + +A +FE + D +S+NAMI G A G + +F M +KP
Sbjct: 380 LIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPS 439
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
T S+L S +L QIH LI+K G +LIDVY+K+ + A ++
Sbjct: 440 LLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFS 499
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
M D++ A+I G A+++ +EA LF + + + ++ ++ + + +AS+
Sbjct: 500 LMQNRDMVIWNAMIFGLAQNER-GEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIF 558
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
G+Q HA K + D + NALIDMYAK G I + F+ K+VI W S+I+ YA
Sbjct: 559 HGQQFHAQIIKAGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTYA 618
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
+HG+ EA+ ++ M+ G+ PN VTF+S+L AC+H GL EG F M KY + P
Sbjct: 619 QHGHAEEALHVFGMMEGAGVEPNYVTFVSVLSACAHAGLVDEGLHHFNSMKTKYAVEPGT 678
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
EH++ VV+LF R G+L +A I +M I+P A++W ++L AC ++GN +G A
Sbjct: 679 EHYASVVNLFGRSGKLHAAKEFIERMPIEPVATIWRSLLSACHLFGNVEIGRYATEMALL 738
Query: 532 MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSF 576
+P S V++SNIY + G W +A+K R+ M+ + K PGYS+
Sbjct: 739 ADPADSGPSVLMSNIYASKGLWADAQKLRQGMDCAGVVKEPGYSW 783
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 157/549 (28%), Positives = 282/549 (51%), Gaps = 22/549 (4%)
Query: 30 PSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
P+ ++ S L+ C +A R +H G ++N+ + T ++ YAK G + +A
Sbjct: 135 PNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSV 194
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD +P RN V+WTA+I+GY+Q G AL +F M GVR ++F +SA AC+ + ++
Sbjct: 195 FDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFV 254
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+GGR I G + + V +AL+DLY KC + A LF+ +E +++VSW MI G
Sbjct: 255 EGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGY 314
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
+ ++ +F + + G +PD F SIL + + + Q+H +IK LES
Sbjct: 315 MQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDE 374
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ +LID+YAK + A ++ ++ + D IS A+I G+AR + + A ++F M
Sbjct: 375 YVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTG-AVEIFGKMRY 433
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ + +L + ++ + L L +QIH K +S D G+ALID+Y+K + D
Sbjct: 434 CSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDD 493
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A F M +++++ W ++I G A++ G EA++L+ +++ G+ PN+ TF++L+ S
Sbjct: 494 AKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVAST 553
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFS-CVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
G + +I H S ++D++A+ G +E ++ + + W
Sbjct: 554 LASIFHGQQFHAQIIKAGA--DSDPHISNALIDMYAKCGFIEEG-RLLFESTLGKDVICW 610
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSV--NYVVLSNIYTA---AGAWD------N 555
++++ + +G+ A ++F M V NYV ++ +A AG D N
Sbjct: 611 NSMISTYAQHGHAE----EALHVFGMMEGAGVEPNYVTFVSVLSACAHAGLVDEGLHHFN 666
Query: 556 ARKTRKLME 564
+ KT+ +E
Sbjct: 667 SMKTKYAVE 675
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 140/398 (35%), Positives = 225/398 (56%), Gaps = 11/398 (2%)
Query: 53 HAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYD 112
HA + +G +L L+ ++ Y+K+G + AR+ FD MP RN+VSW + IS YAQ+G +
Sbjct: 53 HARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHGRE 112
Query: 113 ENALLVFSAMLRSGVRA------NQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENL 166
++ALL+F+A +G + N+F +SALRACA+ R + G + G K N+
Sbjct: 113 DDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDANV 172
Query: 167 FVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ 226
FV +AL++LYAK G I+ A +F+ + ++ V+W A+I G + G + LF M
Sbjct: 173 FVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGLD 232
Query: 227 GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSA 286
G++PD F L S A G + QIH + ES + +LID+Y K + A
Sbjct: 233 GVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLA 292
Query: 287 YQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG-IDDVILCL-MLNIC 344
+L+ SM +++S T +I+G+ + ++ EA +F L + G DV C +LN C
Sbjct: 293 RRLFDSMENRNLVSWTTMIAGYMQ-NSLDTEAMSMFWQ--LSQAGWQPDVFACTSILNSC 349
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWT 404
++A++ GRQ+HA K D V NALIDMYAK + +A F+ + + + IS+
Sbjct: 350 GSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYN 409
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
++I GYA+ G A+E++ KM++ + P+ +TF+SLL
Sbjct: 410 AMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLL 447
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 137/269 (50%), Gaps = 3/269 (1%)
Query: 28 LDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
L PS T++SLL + + IH I+ +G +L+ + +I Y+K V A+
Sbjct: 436 LKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAK 495
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
F M R++V W AMI G AQN E A+ +F+ + SG+ N+FT+ + + + +
Sbjct: 496 LVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLA 555
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
+ G+ I K + + +AL+D+YAKCG+IE+ +LFE KDV+ WN+MI
Sbjct: 556 SIFHGQQFHAQIIKAGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMIS 615
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV-GGIELMKISQIHDLIIKLGLE 264
A G +++ +F M G++P+ T S+L A G+ + + + K +E
Sbjct: 616 TYAQHGHAEEALHVFGMMEGAGVEPNYVTFVSVLSACAHAGLVDEGLHHFNSMKTKYAVE 675
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ S+++++ + G + +A + M
Sbjct: 676 PGTEHYASVVNLFGRSGKLHAAKEFIERM 704
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 21/291 (7%)
Query: 234 TLGSILRASVGGIELMKI-SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRS 292
+L +L + + G L ++ H + GL L L+ Y+K G + A +L+ S
Sbjct: 31 SLAQLLLSCLAGDRLRRVLPPAHARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDS 90
Query: 293 MLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI--------DDVILCLMLNIC 344
M +++S + IS +A+ H +E L G ++ +L L C
Sbjct: 91 MPSRNLVSWGSAISMYAQ---HGREDDALLLFAAFPSAGAASPDGEPPNEFLLASALRAC 147
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWT 404
A + G Q+H A K + VG AL+++YAK+G I A FD + +N ++WT
Sbjct: 148 AQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWT 207
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK 464
++I GY++ G A+EL+ +M +G+ P+ S ACS G G + I+
Sbjct: 208 AVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQ-----IHG 262
Query: 465 YRILPRAEHFSCVV----DLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
Y AE + VV DL+ + +L A + M + S + I G
Sbjct: 263 YAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAG 313
>gi|449523774|ref|XP_004168898.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14850-like [Cucumis sativus]
Length = 606
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 180/554 (32%), Positives = 308/554 (55%), Gaps = 3/554 (0%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHII-TNGYESNLHLSTKVIIFYAKVGDVLSA 84
L ++ S+++ + ++ HA I+ T L ++ YAK+ + SA
Sbjct: 2 PFLSQNSLASVVELAVSVRSSLLGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSA 61
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
+ + P R+VV+WTA+I+G QNG +ALL FS ML VR N FT+ L+A +
Sbjct: 62 KLILELAPCRSVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGL 121
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
R G+ + K + ++FV ++ D+Y+K G++ DA+ +F+ + +++ +WNA I
Sbjct: 122 RMDTTGKQLHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYI 181
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
+ G +DS F ++R G KPD T L A + L Q+H II+ G
Sbjct: 182 SNSVLHGRPEDSVIAFIELLRVGGKPDSITFCXFLNACSDKLGLGPGCQLHGFIIRSGYG 241
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ ++ LID Y K G + + ++ M + + +S ++LI+ + + +N ++A LF
Sbjct: 242 QNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQ-NNEEEKASCLFLR 300
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
+ + D ++ +L CA ++ + GR + A A K + V +AL+DMY K G
Sbjct: 301 ARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGS 360
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKH-EGMVPNDVTFLSLLF 443
I +A +AF+ M ++N++SW +L+ GYA G+ ++A+ L ++M G+VP+ V+ + L
Sbjct: 361 IDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALS 420
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
ACS G G ++F M +Y + P EH++C+VDL R G +E AY+ I++M PT
Sbjct: 421 ACSRAGDLKTGMKIFESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTI 480
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
S+W A+LGAC ++G LG+LAA LF+++P+ S N+VVLSN++ A G W+ R M
Sbjct: 481 SIWGALLGACRMHGKPELGKLAAEKLFELDPKDSGNHVVLSNMFAATGRWEEVTVVRNEM 540
Query: 564 EERSLRKNPGYSFL 577
+E ++K G+S++
Sbjct: 541 KEVGIKKGAGFSWI 554
>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Brachypodium distachyon]
Length = 614
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 164/461 (35%), Positives = 274/461 (59%), Gaps = 8/461 (1%)
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
S++ G A Y +A+ AC + L GR + + K R+ +++ + L+ LY +C
Sbjct: 30 SSLAVPGADARFHDYDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRC 89
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G ++DA + + + ++VVSW AMI G + G + ++ LF M+R G K + FTL ++L
Sbjct: 90 GALDDARNVLDGMPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVL 149
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
+ + ++ Q+H L++K ES + SL+D+Y K G+I+ A +++ + + D +
Sbjct: 150 TSCPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTV 209
Query: 300 SCTALISGFAR---DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI 356
SCTA+ISG+A+ DD EA DLF+ + M + V +L + +ASLN G+Q+
Sbjct: 210 SCTAIISGYAQLGLDD----EALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQV 265
Query: 357 HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYG 416
H + + + + N+LIDMY+K G++ + R FD M ++ ISW +++ GY +HG G
Sbjct: 266 HGLILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIG 325
Query: 417 HEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSC 476
E ++L++ M E + P+ VT L++L CSH GL EG ++F ++ + + H+ C
Sbjct: 326 QEVVQLFRTMTEE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGC 384
Query: 477 VVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEK 536
V+DL R GQL+ A ++I M +PT ++W ++LGAC ++ N S+GE+ A+ L DMEP
Sbjct: 385 VIDLLGRSGQLQKALDLIEHMPFEPTPAIWGSLLGACRVHINVSVGEVVAQKLLDMEPGN 444
Query: 537 SVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
+ NYV+LSNIY AAG W + + RKLM E ++ K P S++
Sbjct: 445 AGNYVILSNIYAAAGMWKDVFRVRKLMLENTVTKEPAKSWI 485
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 126/397 (31%), Positives = 215/397 (54%), Gaps = 6/397 (1%)
Query: 20 SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVG 79
SL+ P Y + + C++++A + +HAH++ Y ++L+T++II Y + G
Sbjct: 31 SLAVPGADARFHDYDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCG 90
Query: 80 DVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALR 139
+ AR D MPERNVVSWTAMISGY+Q+G AL +F MLR+G +AN+FT ++ L
Sbjct: 91 ALDDARNVLDGMPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLT 150
Query: 140 ACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS 199
+C + +Q + + K F ++FV S+LLD+Y K G I++A +F+ + +D VS
Sbjct: 151 SCPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVS 210
Query: 200 WNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLII 259
A+I G A G +D++ LFR + GM+ + T ++L + G L Q+H LI+
Sbjct: 211 CTAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLIL 270
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
+ L L SLID+Y+K G + + +++ +M + IS A++ G+ R +E
Sbjct: 271 RKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGR-HGIGQEVV 329
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN--ALID 377
LF+ M +++ D V L +L+ C++ ++ G I K Q++ +G+ +ID
Sbjct: 330 QLFRTMT-EEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAV-IHIGHYGCVID 387
Query: 378 MYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKH 413
+ +SG++ A + M + W SL+ H
Sbjct: 388 LLGRSGQLQKALDLIEHMPFEPTPAIWGSLLGACRVH 424
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 178/541 (32%), Positives = 302/541 (55%), Gaps = 4/541 (0%)
Query: 44 KAERQAHLIHAHIITNGYESNLHLSTKVII-FYAKVGDVLSARKAFDRMPERNVVSWTAM 102
K++ QA +HA I +S H S ++I Y + + A F + V++W ++
Sbjct: 19 KSKSQAKQLHAQFIRT--QSLSHTSASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSV 76
Query: 103 ISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRF 162
I + AL F M SG + + S L++C M L+ G + G I +
Sbjct: 77 IRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGM 136
Query: 163 VENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRS 222
+L+ +AL+++Y+K I+ +FE + RKDVVS+N +I G A G +D+ + R
Sbjct: 137 DCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVRE 196
Query: 223 MMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGS 282
M +KPD FTL S+L ++++K +IH +I+ G++S + SL+D+YAK
Sbjct: 197 MGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSAR 256
Query: 283 IRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLN 342
I + +++ + + D IS +L++G+ ++ ++ EA LF+ M+ K+ V ++
Sbjct: 257 IEDSERVFSHLYRRDSISWNSLVAGYVQNGRYN-EALRLFRQMVSAKVRPGAVAFSSVIP 315
Query: 343 ICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVIS 402
CA++A+L+LG+Q+H + + + + +AL+DMY+K G I A + FD M + +S
Sbjct: 316 ACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVS 375
Query: 403 WTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI 462
WT++I G+A HG+GHEA+ L+++MK +G+ PN V F+++L ACSH GL E W F M
Sbjct: 376 WTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMT 435
Query: 463 NKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLG 522
Y + EH++ V DL R G+LE AY+ I +M ++PT S+WS +L +CS++ N L
Sbjct: 436 KVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELA 495
Query: 523 ELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
E A +F ++ E YV++ N+Y + G W K R + ++ LRK P S+++ K
Sbjct: 496 EKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNK 555
Query: 583 N 583
Sbjct: 556 T 556
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 206/403 (51%), Gaps = 15/403 (3%)
Query: 17 LKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYA 76
++ S CPD + PS +L+ C R +H I+ G + +L+ ++ Y+
Sbjct: 96 MRASGRCPDHNVFPS----VLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYS 151
Query: 77 KVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSS 136
K+ + S RK F+ MP ++VVS+ +I+GYAQ+G E+AL + M S ++ + FT SS
Sbjct: 152 KLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSS 211
Query: 137 ALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKD 196
L + + G+ I G + + ++++ S+L+D+YAK IED+ +F + R+D
Sbjct: 212 VLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRD 271
Query: 197 VVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHD 256
+SWN+++ G G +++ LFR M+ ++P S++ A L Q+H
Sbjct: 272 SISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHG 331
Query: 257 LIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSK 316
+++ G + + +L+D+Y+K G+I++A +++ M D +S TA+I G A H
Sbjct: 332 YVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHAL-HGHGH 390
Query: 317 EAFDLFKDMILKKMGIDDVILCLMLNICANVASLN-----LGRQIHAFAFKYQSSYDAAV 371
EA LF++M + + + V +L C++V ++ + + + AAV
Sbjct: 391 EAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAV 450
Query: 372 GNALIDMYAKSGEIADANRAFDEMGDKNVIS-WTSLIAGYAKH 413
D+ ++G++ +A +M + S W++L++ + H
Sbjct: 451 A----DLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVH 489
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 189/558 (33%), Positives = 315/558 (56%), Gaps = 16/558 (2%)
Query: 32 TYMSLL----QFCIDKKAERQAHLIHAHIITNGY-ESNLHLSTKVIIFYAKVGDVLSARK 86
TY+ LL +F ++ R+ +HAH++ G+ + +S ++ YAK G + A +
Sbjct: 380 TYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACR 439
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
F M R+ +SW +I+ QNGY E A++ + M ++ + + F S L +CA +
Sbjct: 440 VFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGL 499
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
L G+ + K + V +AL+ +Y +CG + + W +F + DVVSWN+++G
Sbjct: 500 LAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGV 559
Query: 207 LAM-QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGL 263
+A Q +S +F +MM+ G+ P+ T + L A + +EL K QIH +++K G+
Sbjct: 560 MASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGK--QIHSVMLKHGV 617
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSML-KTDIISCTALISGFARDDNHSKEAFDLF 322
N + +L+ YAK G + S +L+ M + D IS ++ISG+ + H +EA D
Sbjct: 618 TEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYN-GHLQEAMDCV 676
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
M+ + +D ++LN CA+VA+L G ++HAF + D V +AL+DMY+K
Sbjct: 677 CLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKC 736
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
G I A++ F M KN SW S+I+GYA+HG G +A+E++++M+ G P+ VTF+S+L
Sbjct: 737 GRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVL 796
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
ACSH GL G + F +++ Y ILPR EH+SCV+DL R G+L+ +++M +KP
Sbjct: 797 SACSHAGLVERGLDYF-ELMEDYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPN 855
Query: 503 ASLWSAILGACSIYGNTS---LGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKT 559
+W +L AC + + LG A+R L ++EP+ VNYV+ S + A G W++ K
Sbjct: 856 TLIWRTVLVACQQSKHRAKIDLGTEASRMLLELEPQNPVNYVLSSKFHAAIGRWEDTAKA 915
Query: 560 RKLMEERSLRKNPGYSFL 577
R M+ +++K G S++
Sbjct: 916 RAAMKGAAVKKEAGRSWV 933
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 134/475 (28%), Positives = 234/475 (49%), Gaps = 18/475 (3%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H ++ G +L L+ ++ YAK + +AR+ FD MP RN VSWT +ISG+ +G
Sbjct: 87 LHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGL 146
Query: 112 DENALLVFSAMLR--SGVRANQFTYSSALRACARMRWLQGGRMIQ--GSIQKGRFVENLF 167
E+A +F AMLR G R FT+ S LRAC + G +Q G + K F N
Sbjct: 147 PEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTT 206
Query: 168 VKSALLDLYAKC--GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR 225
V +AL+ +Y C G A +F+ +D+++WNA++ A +G +F LFR+M
Sbjct: 207 VCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQY 266
Query: 226 QG----MKPDCFTLGSILRAS-VGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKY 280
++P T GS++ A+ + L + Q+ ++K G S + +L+ +A++
Sbjct: 267 DDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFARH 326
Query: 281 GSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF---KDMILKKMGIDDVIL 337
G + A +Y + + + ++ LI+G + H + A ++F +D + V+L
Sbjct: 327 GMLDEAKDIYLGLKERNAVTLNGLIAGLVK-QQHGEAAAEIFMGARDSAAVNVDTYVVLL 385
Query: 338 CLMLNICANVASLNLGRQIHAFAFKYQSSY-DAAVGNALIDMYAKSGEIADANRAFDEMG 396
+ L GR++HA + Y AV N L++MYAK G I A R F M
Sbjct: 386 SAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLME 445
Query: 397 DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWE 456
++ ISW ++I ++GY A+ Y M+ + P++ +S L +C+ GL G +
Sbjct: 446 ARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQ 505
Query: 457 LFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
L D + K+ + + +V ++ G++ + + M+ S W++I+G
Sbjct: 506 LHCDAV-KWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVS-WNSIMG 558
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 88/181 (48%), Gaps = 1/181 (0%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
+ ++D T+ +L C A + +HA + + ES++ + + ++ Y+K G + A
Sbjct: 683 EQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYA 742
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
K F M ++N SW +MISGYA++G AL +F M SG + T+ S L AC+
Sbjct: 743 SKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHA 802
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERK-DVVSWNAM 203
++ G ++ + + S ++DL + G ++ +R+ K + + W +
Sbjct: 803 GLVERGLDYFELMEDYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTV 862
Query: 204 I 204
+
Sbjct: 863 L 863
>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570 [Vitis vinifera]
Length = 607
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 185/515 (35%), Positives = 285/515 (55%), Gaps = 7/515 (1%)
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
L+T +I Y G + AR FD MPER+VV+WT MI+GY +A +VF M+
Sbjct: 45 LATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNEE 104
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW-IEDA 185
+ N FT SS L+AC M+ L GR++ G K ++V +AL+D+YA C ++DA
Sbjct: 105 LDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDA 164
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA--SV 243
++F I K+ VSW +I G + +FR M+ + ++ + F+ +RA S+
Sbjct: 165 CMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSI 224
Query: 244 GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTA 303
G + Q+H + K G ES+ + S++D+Y + A + + M + D+I+
Sbjct: 225 GSHTFGE--QLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNT 282
Query: 304 LISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY 363
LI+G+ R + E+ +F M + + ++ CA +A LN G+QIH +
Sbjct: 283 LIAGYERSN--PTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRR 340
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELY 423
+ A+ NALIDMY+K G IAD+++ F M ++++SWT+++ GY HGYG EA+EL+
Sbjct: 341 GLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELF 400
Query: 424 KKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFAR 483
KM G+ P+ V F+++L ACSH GL EG F M+ Y I P E + CVVDL R
Sbjct: 401 DKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGR 460
Query: 484 RGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVL 543
G++E AY +I M KP +W LGAC + +LG+LAA + D+ P + YV+L
Sbjct: 461 AGKVEEAYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYVML 520
Query: 544 SNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
SNIY A G W + RKLM+ +K G S+++
Sbjct: 521 SNIYAADGKWGEFARLRKLMKRMGNKKETGRSWVE 555
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 194/393 (49%), Gaps = 7/393 (1%)
Query: 28 LDPSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVL-SA 84
LDP+ + S+L+ C K L+H I +G + +++ ++ YA + A
Sbjct: 105 LDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDA 164
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
F + +N VSWT +I+GY L VF ML V N F++S A+RAC +
Sbjct: 165 CMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSI 224
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
G + ++ K F NL V +++LD+Y +C +A F + ++D+++WN +I
Sbjct: 225 GSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLI 284
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G +S ++F M +G P+CFT SI+ A L QIH II+ GL+
Sbjct: 285 AGYERSN-PTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLD 343
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ L+ +LID+Y+K G+I ++Q++ M + D++S TA++ G+ + +EA +LF
Sbjct: 344 GNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGT-HGYGEEAVELFDK 402
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
M+ + D V+ +L+ C++ ++ G R Y S D + ++D+ ++G
Sbjct: 403 MVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAG 462
Query: 384 EIADANRAFDEMGDK-NVISWTSLIAGYAKHGY 415
++ +A + M K + W + H +
Sbjct: 463 KVEEAYELIESMPFKPDECVWGPFLGACKAHTF 495
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 369 AAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKH 428
+ + LI Y G I +A FDEM +++V++WT +IAGY A ++ +M +
Sbjct: 43 SVLATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMN 102
Query: 429 EGMVPNDVTFLSLLFACSHTGLTC 452
E + PN T S+L AC G+ C
Sbjct: 103 EELDPNAFTISSVLKACK--GMKC 124
>gi|224125246|ref|XP_002319538.1| predicted protein [Populus trichocarpa]
gi|222857914|gb|EEE95461.1| predicted protein [Populus trichocarpa]
Length = 577
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 186/505 (36%), Positives = 280/505 (55%), Gaps = 2/505 (0%)
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV-RANQFT 133
YAK G + A K FD MP R+ VSW MISG+ ++G + F M G R +Q T
Sbjct: 2 YAKNGVLTDAAKLFDEMPMRDTVSWNIMISGFLKDGSFDVGFGFFKQMQSLGFYRLDQAT 61
Query: 134 YSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE 193
++ L AC R +M+ F + V +AL+ Y KCG+ +F+ +
Sbjct: 62 LTTILSACDRPELGFVNKMVHCLAVLNGFQREISVGNALITSYFKCGFSSSGMQVFDEML 121
Query: 194 RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ 253
++V++W A+I GL DS LF M ++P+ T S L A G L + Q
Sbjct: 122 ERNVITWTAIISGLVQSELYRDSLRLFVEMTNGLVEPNSLTYLSSLMACSGLQALREGCQ 181
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN 313
IH + KLGL+S + +L+D+Y+K GS+ Q++ S + D +S T +++GFA++
Sbjct: 182 IHGRVWKLGLQSDFCVESALMDMYSKCGSMGDTLQIFESAGQLDKVSMTIILAGFAQN-G 240
Query: 314 HSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN 373
+EA F M+ ID ++ +L + SL LG+QIH+ K + VGN
Sbjct: 241 FEEEAMQFFVKMLEAGTEIDSNMVSAVLGVFGADTSLGLGQQIHSLVIKRSFGSNPFVGN 300
Query: 374 ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP 433
LI+MY+K G++ D+ + F M N +SW S+IA +A+HG G A++LYK+M+ +G+ P
Sbjct: 301 GLINMYSKCGDLEDSTKVFSRMPCMNSVSWNSMIAAFARHGDGSRALQLYKEMRLKGVEP 360
Query: 434 NDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNM 493
DVTFLSLL ACSH GL +G E M +++ PR EH++CVVD+ R G L A
Sbjct: 361 TDVTFLSLLHACSHVGLVEKGMEFLKSMTEVHKLTPRMEHYACVVDMLGRAGLLNEAKTF 420
Query: 494 IRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAW 553
I + IKP +W A+LGAC I+G+ +G+ AA +L PEK Y++L+NIY++ G W
Sbjct: 421 IEGLPIKPDVLVWQALLGACGIHGDPEMGKYAAEHLILSAPEKPSPYILLANIYSSKGRW 480
Query: 554 DNARKTRKLMEERSLRKNPGYSFLQ 578
KT K M+E + K G S+++
Sbjct: 481 KERAKTIKRMKEMCVAKETGISWIE 505
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 197/389 (50%), Gaps = 3/389 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD +T ++L C + ++H + NG++ + + +I Y K G S +
Sbjct: 57 LDQATLTTILSACDRPELGFVNKMVHCLAVLNGFQREISVGNALITSYFKCGFSSSGMQV 116
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD M ERNV++WTA+ISG Q+ ++L +F M V N TY S+L AC+ ++ L
Sbjct: 117 FDEMLERNVITWTAIISGLVQSELYRDSLRLFVEMTNGLVEPNSLTYLSSLMACSGLQAL 176
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G I G + K + V+SAL+D+Y+KCG + D +FE + D VS ++ G
Sbjct: 177 REGCQIHGRVWKLGLQSDFCVESALMDMYSKCGSMGDTLQIFESAGQLDKVSMTIILAGF 236
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A GF +++ F M+ G + D + ++L L QIH L+IK S+
Sbjct: 237 AQNGFEEEAMQFFVKMLEAGTEIDSNMVSAVLGVFGADTSLGLGQQIHSLVIKRSFGSNP 296
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ LI++Y+K G + + +++ M + +S ++I+ FAR + S+ A L+K+M L
Sbjct: 297 FVGNGLINMYSKCGDLEDSTKVFSRMPCMNSVSWNSMIAAFARHGDGSR-ALQLYKEMRL 355
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQ-IHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
K + DV +L+ C++V + G + + + ++ + ++DM ++G +
Sbjct: 356 KGVEPTDVTFLSLLHACSHVGLVEKGMEFLKSMTEVHKLTPRMEHYACVVDMLGRAGLLN 415
Query: 387 DANRAFDEMGDK-NVISWTSLIAGYAKHG 414
+A + + K +V+ W +L+ HG
Sbjct: 416 EAKTFIEGLPIKPDVLVWQALLGACGIHG 444
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 172/351 (49%), Gaps = 12/351 (3%)
Query: 175 LYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGM-KPDCF 233
+YAK G + DA LF+ + +D VSWN MI G G D F F+ M G + D
Sbjct: 1 MYAKNGVLTDAAKLFDEMPMRDTVSWNIMISGFLKDGSFDVGFGFFKQMQSLGFYRLDQA 60
Query: 234 TLGSIL----RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
TL +IL R +G + M +H L + G + + +LI Y K G S Q+
Sbjct: 61 TLTTILSACDRPELGFVNKM----VHCLAVLNGFQREISVGNALITSYFKCGFSSSGMQV 116
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ ML+ ++I+ TA+ISG + + + +++ LF +M + + + L C+ + +
Sbjct: 117 FDEMLERNVITWTAIISGLVQSELY-RDSLRLFVEMTNGLVEPNSLTYLSSLMACSGLQA 175
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
L G QIH +K D V +AL+DMY+K G + D + F+ G + +S T ++AG
Sbjct: 176 LREGCQIHGRVWKLGLQSDFCVESALMDMYSKCGSMGDTLQIFESAGQLDKVSMTIILAG 235
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
+A++G+ EA++ + KM G D +S + + + ++ K
Sbjct: 236 FAQNGFEEEAMQFFVKMLEAG-TEIDSNMVSAVLGVFGADTSLGLGQQIHSLVIKRSFGS 294
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTS 520
+ +++++++ G LE + + +M + S W++++ A + +G+ S
Sbjct: 295 NPFVGNGLINMYSKCGDLEDSTKVFSRMPCMNSVS-WNSMIAAFARHGDGS 344
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 194/544 (35%), Positives = 296/544 (54%), Gaps = 1/544 (0%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
++L+ + A A IHA G++ N + T +I Y+ G V AR FD + +
Sbjct: 153 TILKVLVTMDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGK 212
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
+ V+WTAM+S Y++N E AL FS M +G + N F +SAL+A + G+ I
Sbjct: 213 DAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIH 272
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND 214
G K + V ALLD+YAKCG IEDA +FE I DV+ W+ +I A N+
Sbjct: 273 GCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNE 332
Query: 215 DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLI 274
+F +F MMR + P+ F+L +L+A L QIH+L IKLG ES + +L+
Sbjct: 333 QAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALM 392
Query: 275 DVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD 334
D+YAK ++ ++ +++ S+ + +S +I G+ + +++A +F +M M
Sbjct: 393 DMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQS-GFAEDALSVFHEMRAAHMLSTQ 451
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE 394
V +L CAN +S+ QIH+ K + D V N+LID YAK G I DA + F+
Sbjct: 452 VTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFES 511
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG 454
+ + +V+SW S+I+ YA HG A+EL+ +M + NDVTF+SLL C TGL +G
Sbjct: 512 IVECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQG 571
Query: 455 WELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACS 514
LF M+ +RI P EH++C+V L R G+L A I + P+ +W A+L +C
Sbjct: 572 LWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCV 631
Query: 515 IYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGY 574
++ N +LG AA + D+EP YV+LSN+Y AAG D RK M ++K G
Sbjct: 632 VHKNVALGRYAAEKVLDIEPHDETTYVLLSNMYAAAGILDEVALWRKSMRNVGVKKEAGL 691
Query: 575 SFLQ 578
S+++
Sbjct: 692 SWVE 695
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 155/514 (30%), Positives = 259/514 (50%), Gaps = 11/514 (2%)
Query: 20 SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH--LSTKVIIFYAK 77
SL+ P LD LQ CI + R +HA ++ G + L + ++ FYAK
Sbjct: 37 SLALPK--LDSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAK 94
Query: 78 VGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSA 137
+G + +AR+ FD MPERN VS+ ++ GYA G E AL +F + R G N F ++
Sbjct: 95 LGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTI 154
Query: 138 LRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDV 197
L+ M I K N FV +AL+D Y+ CG + A +F+ I KD
Sbjct: 155 LKVLVTMDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDA 214
Query: 198 VSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDL 257
V+W AM+ + + + F M G KP+ F L S L+A+V + IH
Sbjct: 215 VTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGC 274
Query: 258 IIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKE 317
+K ++ + G+L+D+YAK G I A+ ++ + D+I + LIS +A+ +++
Sbjct: 275 SVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQ-SCQNEQ 333
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
AF++F M+ + ++ L +L CAN+A L LG QIH A K + VGNAL+D
Sbjct: 334 AFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMD 393
Query: 378 MYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVT 437
MYAK + ++ F + D N +SW ++I GY + G+ +A+ ++ +M+ M+ VT
Sbjct: 394 MYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVT 453
Query: 438 FLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
F S+L AC++T ++ + +I K + ++D +A+ G + A + +
Sbjct: 454 FSSVLRACANTSSIKHAVQIHS-LIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESI 512
Query: 498 NIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
++ W++I+ A +++G + A LFD
Sbjct: 513 -VECDVVSWNSIISAYALHGRAT----NALELFD 541
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 80/155 (51%), Gaps = 1/155 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ S+L+ C + + + A IH+ I + + ++ + +I YAK G + A K F+ +
Sbjct: 453 TFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESI 512
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL-QGG 150
E +VVSW ++IS YA +G NAL +F M +S ++AN T+ S L C + QG
Sbjct: 513 VECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGL 572
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
+ + R ++ + ++ L + G + DA
Sbjct: 573 WLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDA 607
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 197/619 (31%), Positives = 335/619 (54%), Gaps = 67/619 (10%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
T LD T +L+ C + + R H I NG+ESN+ + ++ Y++ G + A
Sbjct: 6 TRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 65
Query: 86 KAFDRMPER---NVVSWTAMISGYAQNGYDENALLVFSAML------RSGVRANQFTYSS 136
FD + +R +V+SW +++S + ++ AL +FS M + R++ + +
Sbjct: 66 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 125
Query: 137 ALRACARMRWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERK 195
L AC ++ + + + G +I+ G F++ +FV +AL+D YAKCG +E+A +F +E K
Sbjct: 126 ILPACGSLKAVPQTKEVHGNAIRNGTFLD-VFVGNALIDAYAKCGLMENAVKVFNMMEFK 184
Query: 196 DVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ----------------------------- 226
DVVSWNAM+ G + G +F LF++M ++
Sbjct: 185 DVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVF 244
Query: 227 ------GMKPDCFTLGSILRASVGGIELMKISQIHDLIIK---------LGLESSNKLT- 270
G P+C T+ S+L A + +IH +K G E + +
Sbjct: 245 RQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVY 304
Query: 271 GSLIDVYAKYGSIRSAYQLYR--SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+LID+Y+K S ++A ++ + + ++++ T +I G A+ + S +A LF +MI +
Sbjct: 305 NALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGD-SNDALKLFVEMISE 363
Query: 329 KMGIDD---VILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA---VGNALIDMYAKS 382
G+ I C+++ CA++A++ +G+QIHA+ ++ YD++ V N LI+MY+K
Sbjct: 364 PYGVAPNAYTISCILM-ACAHLAAIRIGKQIHAYVLRHHQ-YDSSAYFVANCLINMYSKC 421
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
G++ A FD M K+ ISWTS++ GY HG G EA++++ KM+ G VP+D+TFL +L
Sbjct: 422 GDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVL 481
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
+ACSH G+ +G F M Y + PRAEH++ +DL AR G+L+ A+ ++ M ++PT
Sbjct: 482 YACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPT 541
Query: 503 ASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKL 562
A +W A+L AC ++ N L E A L +M E +Y ++SNIY AG W + + R L
Sbjct: 542 AVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHL 601
Query: 563 MEERSLRKNPGYSFLQSSK 581
M++ ++K PG S++Q K
Sbjct: 602 MKKSGIKKRPGCSWVQGQK 620
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 118/469 (25%), Positives = 229/469 (48%), Gaps = 65/469 (13%)
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
MLR+G R + FT L+AC + + G G I F N+F+ +AL+ +Y++CG
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 182 IEDAWILFERIERK---DVVSWNAMIGGLAMQGFNDDSFWLFRSMM------RQGMKPDC 232
+E+A ++F+ I ++ DV+SWN+++ + LF M + D
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120
Query: 233 FTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRS 292
++ +IL A + + ++H I+ G + +LID YAK G + +A +++
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 180
Query: 293 MLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGID------------------- 333
M D++S A+++G+++ N K AF+LFK+M + + +D
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNF-KAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHE 239
Query: 334 ----------------DVILCLMLNICANVASLNLGRQIHAFAFKY----------QSSY 367
V + +L+ CA++ + + G +IHA++ K
Sbjct: 240 ALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDE 299
Query: 368 DAAVGNALIDMYAKSGEIADANRAFDEMG--DKNVISWTSLIAGYAKHGYGHEAIELYKK 425
D V NALIDMY+K A FD++ ++NV++WT +I G+A++G ++A++L+ +
Sbjct: 300 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 359
Query: 426 MKHE--GMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFS-CVVDLFA 482
M E G+ PN T +L AC+H G ++ ++ ++ A + C++++++
Sbjct: 360 MISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYS 419
Query: 483 RRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
+ G +++A ++ M+ K S W++++ ++G S A ++FD
Sbjct: 420 KCGDVDTARHVFDSMSQKSAIS-WTSMMTGYGMHGRGS----EALDIFD 463
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 183/498 (36%), Positives = 287/498 (57%), Gaps = 20/498 (4%)
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
NV SW ++I+ A+ G AL FS++ + G+ + ++ +++C+ + L GRM
Sbjct: 1979 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 2038
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND 214
F +LFV SAL+D+Y+KCG ++DA LF+ I ++VVSW +MI G D
Sbjct: 2039 QQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQAD 2098
Query: 215 DSFWLFRSMMRQ--------GMKPDCFTLGSIL----RASVGGIELMKISQIHDLIIKLG 262
++ LF+ + + + D + S+L R S GI +H ++K G
Sbjct: 2099 NALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGI----TEGVHGFVVKKG 2154
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
+ S + +L+D YAK G + +++ M + D IS ++I+ +A+ S EA ++F
Sbjct: 2155 FDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQS-GLSGEALEVF 2213
Query: 323 KDMILKKMGI--DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYA 380
M+ + +G+ + V L +L CA+ +L G+ IH K Y+ VG ++IDMY
Sbjct: 2214 HGMV-RHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYC 2272
Query: 381 KSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
K G + A + FD M +KNV SWT+++AGY HG EA++++ KM G+ PN +TF+S
Sbjct: 2273 KCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVS 2332
Query: 441 LLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIK 500
+L ACSH GL EGW F M +KY I P EH+ C+VDLF R G L AYN+I++M +K
Sbjct: 2333 VLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMK 2392
Query: 501 PTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTR 560
P +W ++LGAC I+ N LGE+AA+ LF+++P+ YV+LSN+Y AG W + + R
Sbjct: 2393 PDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMR 2452
Query: 561 KLMEERSLRKNPGYSFLQ 578
LM+ R L K PG+S ++
Sbjct: 2453 MLMKNRQLVKPPGFSLVE 2470
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 196/407 (48%), Gaps = 41/407 (10%)
Query: 124 RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIE 183
R +RA + + L+ C + L R I I + + + L+ LY+ G I
Sbjct: 22 RGNIRAKKALF--LLQNCKNFKHL---RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIA 76
Query: 184 DAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV 243
A +LF +I+ +WN +I + G ++ + L+++M+ QG+ D FT +++A
Sbjct: 77 YAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACT 136
Query: 244 G--GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM-------- 293
I+L K+ +H +IK G + +LID Y K G R A +++ M
Sbjct: 137 NFLSIDLGKV--VHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSW 194
Query: 294 --LKTDIISC---------------------TALISGFARDDNHSKEAFDLFKDMILKKM 330
+ + +ISC TA+I+G+ R+ +EA +LFK M + +
Sbjct: 195 TTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRN-QQPEEALELFKRMQAENI 253
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
++ + ++ C + L LGR IH +A K +G ALIDMY+K G I DA
Sbjct: 254 FPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIE 313
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
F+ M K++ +W S+I HG G EA+ L+ +M+ + P+ +TF+ +L AC H
Sbjct: 314 VFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKN 373
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
EG FT M Y I P EH+ C+ +L+AR L+ A+ +++
Sbjct: 374 VKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEV 420
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 187/372 (50%), Gaps = 12/372 (3%)
Query: 53 HAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYD 112
H G+E++L +S+ +I Y+K G + AR FD +P RNVVSWT+MI+GY QN
Sbjct: 2038 HQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQA 2097
Query: 113 ENALLVFSAMLR--------SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVE 164
+NALL+F L + V + S L AC+R+ + G + K F
Sbjct: 2098 DNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDG 2157
Query: 165 NLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMM 224
++ V + L+D YAKCG + +F+ +E KD +SWN+MI A G + ++ +F M+
Sbjct: 2158 SIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMV 2217
Query: 225 RQ-GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
R G++ + TL ++L A L IHD +IK+ LE + + S+ID+Y K G +
Sbjct: 2218 RHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRV 2277
Query: 284 RSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNI 343
A + + M + ++ S TA+++G+ +KEA D+F M+ + + + +L
Sbjct: 2278 EMAKKTFDRMKEKNVKSWTAMVAGYGM-HGRAKEALDIFYKMVRAGVKPNYITFVSVLAA 2336
Query: 344 CANVASLNLG-RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK-NVI 401
C++ + G +A KY ++D++ ++G + +A M K + +
Sbjct: 2337 CSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFV 2396
Query: 402 SWTSLIAGYAKH 413
W SL+ H
Sbjct: 2397 VWGSLLGACRIH 2408
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 150/281 (53%), Gaps = 3/281 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD +S+L C + +H ++ G++ ++ + ++ YAK G L ++K
Sbjct: 2122 LDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKV 2181
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS-GVRANQFTYSSALRACARMRW 146
FD M E++ +SW +MI+ YAQ+G AL VF M+R GVR N T S+ L ACA
Sbjct: 2182 FDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGA 2241
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
L+ G+ I + K N+ V ++++D+Y KCG +E A F+R++ K+V SW AM+ G
Sbjct: 2242 LRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAG 2301
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLES 265
M G ++ +F M+R G+KP+ T S+L A S G+ + + K +E
Sbjct: 2302 YGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEP 2361
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALI 305
+ G ++D++ + G + AY L + M +K D + +L+
Sbjct: 2362 GIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLL 2402
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 177/339 (52%), Gaps = 12/339 (3%)
Query: 188 LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIE 247
++ +++ +V SWN++I LA G + ++ F S+ + G+ P + +++ +
Sbjct: 1971 FYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCD 2030
Query: 248 LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG 307
L+ H G E+ ++ +LID+Y+K G ++ A L+ + +++S T++I+G
Sbjct: 2031 LVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITG 2090
Query: 308 FARDDNHSKEAFDLFKDMILKKMGIDD--------VILCLMLNICANVASLNLGRQIHAF 359
+ +++ + A LFKD + ++ ++D V++ +L+ C+ V+ + +H F
Sbjct: 2091 YVQNE-QADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGF 2149
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
K VGN L+D YAK G+ + + FD M +K+ ISW S+IA YA+ G EA
Sbjct: 2150 VVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEA 2209
Query: 420 IELYKKM-KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVV 478
+E++ M +H G+ N VT ++L AC+H G G + D + K + + ++
Sbjct: 2210 LEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAG-KCIHDQVIKMDLEYNVCVGTSII 2268
Query: 479 DLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
D++ + G++E A +M K S W+A++ ++G
Sbjct: 2269 DMYCKCGRVEMAKKTFDRMKEKNVKS-WTAMVAGYGMHG 2306
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 33/274 (12%)
Query: 3 IVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
I+RAN G +QAL ++ C D T+ +++ C + + ++H +I G
Sbjct: 96 IIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYG 155
Query: 61 YESNLHLSTKVIIFYAKVG-------------------------------DVLSARKAFD 89
+ ++ + +I FY K G D+ AR+ FD
Sbjct: 156 FSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFD 215
Query: 90 RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG 149
+P +NVVSWTAMI+GY +N E AL +F M + N++T S ++AC M L
Sbjct: 216 EIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTL 275
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
GR I K +++ +AL+D+Y+KCG I+DA +FE + RK + +WN+MI L +
Sbjct: 276 GRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGV 335
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV 243
G ++ LF M R +KPD T +L A V
Sbjct: 336 HGLGQEALNLFSEMERVNVKPDAITFIGVLCACV 369
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 190/396 (47%), Gaps = 42/396 (10%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
LLQ C + K RQ IHA II +G ++ L+ K+I Y+ G + A F ++
Sbjct: 33 LLQNCKNFKHLRQ---IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC 89
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG 155
+W +I NG E AL+++ M+ G+ A++FT+ ++AC + G+++ G
Sbjct: 90 TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG---- 211
S+ K F ++FV++ L+D Y KCG A +FE++ ++VVSW +I GL G
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQE 209
Query: 212 ----FN-----------------------DDSFWLFRSMMRQGMKPDCFTLGSILRASVG 244
F+ +++ LF+ M + + P+ +T+ S+++A
Sbjct: 210 ARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTE 269
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
L IHD IK +E L +LID+Y+K GSI+ A +++ +M + + + ++
Sbjct: 270 MGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSM 329
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
I+ +EA +LF +M + D + +L C ++ ++ G A+ +
Sbjct: 330 ITSLGV-HGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEG---CAYFTRMT 385
Query: 365 SSYDAAV----GNALIDMYAKSGEIADANRAFDEMG 396
Y A + ++YA+S + +A ++ E+G
Sbjct: 386 QHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEVG 421
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 155/322 (48%), Gaps = 53/322 (16%)
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSA----YQLYRSMLKT-DIISCTALI 305
+ QIH II+ GL + LT LI +Y+ +G I A YQ+ T ++I I
Sbjct: 43 LRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTI 102
Query: 306 SGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS 365
+G S++A L+K+M+ + + D ++ C N S++LG+ +H KY
Sbjct: 103 NGL------SEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGF 156
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA----------------- 408
S D V N LID Y K G A + F++M +NV+SWT++I+
Sbjct: 157 SGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDE 216
Query: 409 --------------GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG 454
GY ++ EA+EL+K+M+ E + PN+ T +SL+ AC+ G+ G
Sbjct: 217 IPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLG 276
Query: 455 WELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL--WSAILGA 512
+ D K I + ++D++++ G ++ A + M P SL W++++ +
Sbjct: 277 RGIH-DYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETM---PRKSLPTWNSMITS 332
Query: 513 CSIYGNTSLGELAARNLF-DME 533
++G LG+ A NLF +ME
Sbjct: 333 LGVHG---LGQ-EALNLFSEME 350
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 97/177 (54%), Gaps = 2/177 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T ++L C A R IH +I E N+ + T +I Y K G V A+K FDRM
Sbjct: 2228 TLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRM 2287
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
E+NV SWTAM++GY +G + AL +F M+R+GV+ N T+ S L AC+ ++ G
Sbjct: 2288 KEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGW 2347
Query: 152 MIQGSIQKGRFVE-NLFVKSALLDLYAKCGWIEDAWILFERIERK-DVVSWNAMIGG 206
+++ +E + ++DL+ + G + +A+ L +R++ K D V W +++G
Sbjct: 2348 HWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGA 2404
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 7/159 (4%)
Query: 3 IVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
++ + Q ++AL+ + + + T +SL++ C + IH + I N
Sbjct: 228 MINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNC 287
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
E ++L T +I Y+K G + A + F+ MP +++ +W +MI+ +G + AL +FS
Sbjct: 288 IEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFS 347
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGG-----RMIQ 154
M R V+ + T+ L AC ++ ++ G RM Q
Sbjct: 348 EMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQ 386
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 184/537 (34%), Positives = 302/537 (56%), Gaps = 4/537 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H + +G +S++ ++ ++ Y+K+G AR+ F+ M +++SW +MIS AQ+
Sbjct: 926 VHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSL 985
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARM-RWLQGGRMIQGSIQKGRFVENLFVKS 170
+E ++ +F +L G++ + FT +S LRAC+ + L R I K + + FV +
Sbjct: 986 EEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVAT 1045
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
L+D+Y+K G +E+A LF+ + D+ WNAM+ G + + LF + + G K
Sbjct: 1046 TLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKS 1105
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
D TL + +A + L + QIH IK G +S + ++D+Y K G + +A ++
Sbjct: 1106 DQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVF 1165
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
+ D ++ T++ISG D+ + +A ++ M ++ D+ ++ + V +L
Sbjct: 1166 NYISAPDDVAWTSMISGCV-DNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTAL 1224
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
GRQ+HA K D VG +L+DMYAK G I DA R F +M +N+ W +++ G
Sbjct: 1225 EQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGL 1284
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
A+HG EA+ L+K MK G+ P+ V+F+ +L ACSH GLT E +E M N Y I P
Sbjct: 1285 AQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPE 1344
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
EH+SC+VD R G ++ A +I M K +AS+ A+LGAC I G+ G+ A LF
Sbjct: 1345 IEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLF 1404
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKNILLL 587
+EP S YV+LSNIY AA WD+ RK+M+ ++++K+PG+S++ KN+L L
Sbjct: 1405 ALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDV--KNMLHL 1459
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 141/510 (27%), Positives = 239/510 (46%), Gaps = 46/510 (9%)
Query: 53 HAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYA----- 107
HA I+ +G + LS ++ Y+K G + SAR+ FD PER++V+W A++ YA
Sbjct: 644 HARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDS 703
Query: 108 QNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLF 167
+G + L +F + S + T + L+ C L + G K ++F
Sbjct: 704 NDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVF 763
Query: 168 VKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
V AL+++Y+KCG + DA +LF+ + +DVV WN M+ G G ++F LF R G
Sbjct: 764 VSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSG 823
Query: 228 MKPDCFTLGSILR--ASVGGIELMKIS-QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIR 284
++PD F++ IL + V E ++ Q+ KL L N DV+
Sbjct: 824 LRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDDNP------DVFC------ 871
Query: 285 SAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNIC 344
+ C L +G DN A + F +M + D V L ++L
Sbjct: 872 ---------WNKKLSEC--LWAG----DNWG--AIECFVNMNGLNIDYDAVTLLVVLAAV 914
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWT 404
A L LG+Q+H A K D +V N+L++MY+K G A F++M ++ISW
Sbjct: 915 AGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWN 974
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM-IN 463
S+I+ A+ E++ L+ + HEG+ P+ T S+L ACS +G + + ++
Sbjct: 975 SMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSS---LIDGLNISRQIHVH 1031
Query: 464 KYRILPRAEHF--SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSL 521
+ A+ F + ++D++++ G++E A + + + A W+A++ I GN
Sbjct: 1032 ALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLA-CWNAMMFG-YIIGNDGK 1089
Query: 522 GELAARNLFDMEPEKSVNYVVLSNIYTAAG 551
L +L EKS + + L+ A G
Sbjct: 1090 KALELFSLIHKSGEKS-DQITLATAAKACG 1118
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 130/491 (26%), Positives = 228/491 (46%), Gaps = 35/491 (7%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T +L+ C++ A +H + I G E ++ +S ++ Y+K G + AR FD M
Sbjct: 729 TLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWM 788
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
ER+VV W M+ GY Q G ++ A +FS RSG+R ++F+ L + + W +G
Sbjct: 789 RERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKW 848
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ V+ K +L D + DV WN + G
Sbjct: 849 LADQ-------VQAYAAKLSLSD------------------DNPDVFCWNKKLSECLWAG 883
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
N + F +M + D TL +L A G +L Q+H + +K GL+S +
Sbjct: 884 DNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVAN 943
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
SL+++Y+K G A +++ M D+IS ++IS A+ + +E+ +LF D++ + +
Sbjct: 944 SLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQ-SSLEEESVNLFIDLLHEGLK 1002
Query: 332 IDDVILCLMLNICAN-VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
D L +L C++ + LN+ RQIH A K + D+ V LID+Y+KSG++ +A
Sbjct: 1003 PDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEF 1062
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
F D ++ W +++ GY G +A+EL+ + G + +T + AC L
Sbjct: 1063 LFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVL 1122
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA---YNMIRQMNIKPTASLWS 507
+G ++ I K S ++D++ + G + +A +N I P W+
Sbjct: 1123 LDQGKQIHAHAI-KAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYIS----APDDVAWT 1177
Query: 508 AILGACSIYGN 518
+++ C GN
Sbjct: 1178 SMISGCVDNGN 1188
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 147/247 (59%), Gaps = 1/247 (0%)
Query: 48 QAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYA 107
Q IHAH I G++S+LH+++ ++ Y K GD+++A F+ + + V+WT+MISG
Sbjct: 1125 QGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCV 1184
Query: 108 QNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLF 167
NG ++ AL ++ M +S V +++T+++ ++A + + L+ GR + ++ K V + F
Sbjct: 1185 DNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPF 1244
Query: 168 VKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
V ++L+D+YAKCG IEDA+ LF+++ +++ WNAM+ GLA G +++ LF+SM G
Sbjct: 1245 VGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHG 1304
Query: 228 MKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSA 286
++PD + IL A S G+ +H + G+E + L+D + G ++ A
Sbjct: 1305 IEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEA 1364
Query: 287 YQLYRSM 293
++ +M
Sbjct: 1365 DKVIETM 1371
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 112/232 (48%), Gaps = 6/232 (2%)
Query: 238 ILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
+LR ++ L+ H I+ G + L+ +L+ +Y+K GS+ SA Q++ + + D
Sbjct: 627 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686
Query: 298 IISCTALISGFA----RDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG 353
+++ A++ +A +D +++E LF+ + + L +L +C N L
Sbjct: 687 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 746
Query: 354 RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKH 413
+H +A K +D V AL+++Y+K G + DA FD M +++V+ W ++ GY +
Sbjct: 747 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 806
Query: 414 GYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
G EA +L+ + G+ P++ + +L S W D + Y
Sbjct: 807 GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKW--LADQVQAY 856
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 2/188 (1%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
+ D T+ +L++ A Q +HA++I S+ + T ++ YAK G++ A
Sbjct: 1204 VMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAY 1263
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
+ F +M RN+ W AM+ G AQ+G E A+ +F +M G+ ++ ++ L AC+
Sbjct: 1264 RLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAG 1323
Query: 146 WLQGGRMIQGSIQKGRFVE-NLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN-AM 203
S+ +E + S L+D + G +++A + E + K S N A+
Sbjct: 1324 LTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRAL 1383
Query: 204 IGGLAMQG 211
+G +QG
Sbjct: 1384 LGACRIQG 1391
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 187/564 (33%), Positives = 320/564 (56%), Gaps = 7/564 (1%)
Query: 21 LSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGD 80
L +T+ Y SL+Q CI K+ I +H + G+ +L K+I Y K G
Sbjct: 68 LCITETIQSTKLYSSLIQQCIGIKSITDITKIQSHALKRGFHHSL--GNKLIDAYLKCGS 125
Query: 81 VLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRA 140
V+ ARK FD +P R++V+W +MI+ Y +NG + A+ ++ M+ G+ ++FT+SS +A
Sbjct: 126 VVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKA 185
Query: 141 CARMRWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS 199
+ + + G+ G S+ G V N+FV SAL+D+YAK G + DA ++ +++ KDVV
Sbjct: 186 FSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVL 245
Query: 200 WNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIE-LMKISQIHDLI 258
+ A+I G + G + +S +FR+M ++G++ + +TL S+L G +E L IH LI
Sbjct: 246 FTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVL-VCCGNLEDLTSGRLIHGLI 304
Query: 259 IKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEA 318
+K GLES+ SL+ +Y + G + + ++++ + + ++ T++I G ++ + A
Sbjct: 305 VKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQN-GREEIA 363
Query: 319 FDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDM 378
F+ M+ + + L +L C+++A L G+QIHA K+ D VG ALID
Sbjct: 364 LLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDF 423
Query: 379 YAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTF 438
Y K G A F+ + + +V+S S+I YA++G+GHEA++L+ MK G+ PN+VT+
Sbjct: 424 YGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTW 483
Query: 439 LSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMN 498
L +L AC++ GL EG +F+ N I +H++C+VDL R G+L+ A +I Q+N
Sbjct: 484 LGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVN 543
Query: 499 IKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARK 558
I +W +L AC I+G+ + + + D+ PE +V+LSN+Y + G W +
Sbjct: 544 ISDVV-IWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIE 602
Query: 559 TRKLMEERSLRKNPGYSFLQSSKK 582
+ M E L+KNP S++ ++
Sbjct: 603 MKSAMREMRLKKNPAMSWVDVERE 626
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 224/442 (50%), Gaps = 15/442 (3%)
Query: 2 NIVRANFKTGQLKQALK-FSLSCPDTLL-DPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
+++ + + G+ K+A+ + PD +L D T+ S+ + D + H +
Sbjct: 146 SMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVL 205
Query: 60 GYE-SNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLV 118
G SN+ + + ++ YAK G + AR D++ ++VV +TA+I GY+ +G D +L V
Sbjct: 206 GVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQV 265
Query: 119 FSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
F M + G+ AN++T SS L C + L GR+I G I K + +++LL +Y +
Sbjct: 266 FRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYR 325
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
CG ++D+ +F++ + V+W ++I GL G + + FR M+R + P+ FTL S+
Sbjct: 326 CGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSV 385
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
LRA L + QIH +++K GL+ + +LID Y K GS A ++ +L+ D+
Sbjct: 386 LRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDV 445
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
+S ++I +A+ + EA LF M + ++V +L+ C N L G H
Sbjct: 446 VSVNSMIYSYAQ-NGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEG--CHI 502
Query: 359 FAFKYQSSYDAAVGN---ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGY 415
F+ S + ++D+ ++G + +A +++ +V+ W +L++ HG
Sbjct: 503 FSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSACRIHG- 561
Query: 416 GHEAIELYKKMKHE--GMVPND 435
+E+ K++ + + P D
Sbjct: 562 ---DVEMAKRVMNRVIDLAPED 580
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 189/572 (33%), Positives = 310/572 (54%), Gaps = 3/572 (0%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPSTY--MSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K L +AL+F + ++P Y LL+ C D+ R IH ++ +G+ +L
Sbjct: 112 KVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLF 171
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
T + YAK V ARK FDRMPER++VSW +++GY+QNG AL + +M
Sbjct: 172 AMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEEN 231
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
++ + T S L A + +R + G+ I G + F + + +AL+D+YAKCG +E A
Sbjct: 232 LKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETAR 291
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
LF+ + ++VVSWN+MI ++ +F+ M+ +G+KP ++ L A
Sbjct: 292 QLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLG 351
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
+L + IH L ++LGL+ + + SLI +Y K + +A ++ + ++S A+I
Sbjct: 352 DLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMIL 411
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
GFA++ +A + F M + + D ++ A ++ + + IH +
Sbjct: 412 GFAQN-GRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLD 470
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
+ V AL+DMYAK G I A FD M +++V +W ++I GY HG+G A+EL+++M
Sbjct: 471 KNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEM 530
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
+ + PN VTFLS++ ACSH+GL G + F M Y I +H+ +VDL R G+
Sbjct: 531 QKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGR 590
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
L A++ I QM +KP +++ A+LGAC I+ N + E AA LF++ P+ +V+L+NI
Sbjct: 591 LNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANI 650
Query: 547 YTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
Y AA W+ + R M + LRK PG S ++
Sbjct: 651 YRAASMWEKVGQVRVSMLRQGLRKTPGCSMVE 682
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 135/501 (26%), Positives = 258/501 (51%), Gaps = 20/501 (3%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
LL+ C K RQ I + NG TK++ + + G V A + F+ + +
Sbjct: 43 LLERCSSLKELRQ---ILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 99
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG 155
V + M+ G+A+ + AL F M V + ++ L+ C L+ G+ I G
Sbjct: 100 NVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD 215
+ K F +LF + L ++YAKC + +A +F+R+ +D+VSWN ++ G + G
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARM 219
Query: 216 SFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI-SQIHDLIIKLGLESSNKLTGSLI 274
+ + +SM + +KP T+ S+L A V + L+ + +IH ++ G +S ++ +L+
Sbjct: 220 ALEMVKSMCEENLKPSFITIVSVLPA-VSALRLISVGKEIHGYAMRSGFDSLVNISTALV 278
Query: 275 DVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD 334
D+YAK GS+ +A QL+ ML+ +++S ++I + +++N KEA +F+ M+ + + D
Sbjct: 279 DMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNEN-PKEAMLIFQKMLDEGVKPTD 337
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE 394
V + L+ CA++ L GR IH + + + +V N+LI MY K E+ A F +
Sbjct: 338 VSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGK 397
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG 454
+ + ++SW ++I G+A++G +A+ + +M+ + P+ T++S++ A + +T
Sbjct: 398 LQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA 457
Query: 455 -W---ELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
W + ++K + A +VD++A+ G + A +I M + + W+A++
Sbjct: 458 KWIHGVVMRSCLDKNVFVTTA-----LVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMI 511
Query: 511 GACSIYGNTSLGELAARNLFD 531
YG G+ AA LF+
Sbjct: 512 DG---YGTHGFGK-AALELFE 528
>gi|357441891|ref|XP_003591223.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480271|gb|AES61474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 606
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 184/516 (35%), Positives = 293/516 (56%), Gaps = 8/516 (1%)
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
L+T +I Y G A FD MP R+V++WT+MI+GY + A VF+ MLR G
Sbjct: 43 LTTDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDG 102
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKC-GWIED 184
V+ N FT S+ L+AC ++ L G+++ G +I+ G +++V +AL+D+YA C +++
Sbjct: 103 VKPNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDN 162
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM-MRQG-MKPDCFTLGSILRAS 242
A ++FE I K+ VSW +I G + +FR M M +G + P F++ AS
Sbjct: 163 ARLVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACAS 222
Query: 243 VGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCT 302
+G L K Q+H +I G ES+ + +++D+Y + A QL+ M + D I+
Sbjct: 223 IGSSNLGK--QVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWN 280
Query: 303 ALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK 362
LI+GF D++ E+ +F M+ + + ++ CAN+A L G+Q+H
Sbjct: 281 TLIAGFETLDSY--ESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIH 338
Query: 363 YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIEL 422
+ + NALIDMYAK G +AD+++ F M N++SWTS++ GY HG+G EA++L
Sbjct: 339 RGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDL 398
Query: 423 YKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFA 482
+ +M G+ P+ + F+++L ACSH GL EG F M + Y + P + ++CVVDL +
Sbjct: 399 FNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYACVVDLLS 458
Query: 483 RRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVV 542
R G+++ AY +I M KP S+W A+LGAC Y S+ +LAA + +M+P K+ YV+
Sbjct: 459 RAGRVKEAYELIENMPFKPDESIWVALLGACKKYKQPSIQKLAALKVLEMKPNKAGTYVL 518
Query: 543 LSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
LSN A G W + RKLM +K G S+++
Sbjct: 519 LSNFSAAEGNWADFASLRKLMRSTKSKKEVGRSWIE 554
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 135/268 (50%), Gaps = 4/268 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L P ++ + C + +HA +I +G+ESNL + ++ Y + A++
Sbjct: 208 LSPFSFSIAVSACASIGSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQL 267
Query: 88 FDRMPERNVVSWTAMISGYAQ-NGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
F M +++ ++W +I+G+ + Y+ +L +FS M+ G N FT++S + ACA +
Sbjct: 268 FGEMTQKDTITWNTLIAGFETLDSYE--SLCIFSQMVSEGFSPNCFTFTSVIAACANLAI 325
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
L G+ + G I NL + +AL+D+YAKCG + D+ +F + ++VSW +M+ G
Sbjct: 326 LYCGQQLHGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIG 385
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLES 265
G ++ LF M+ G+KPD ++L A S G+ + + +
Sbjct: 386 YGAHGHGKEAVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAP 445
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ ++D+ ++ G ++ AY+L +M
Sbjct: 446 DRDIYACVVDLLSRAGRVKEAYELIENM 473
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 104/202 (51%), Gaps = 4/202 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ S++ C + +H II G ++NL LS +I YAK G+V + K F M
Sbjct: 312 TFTSVIAACANLAILYCGQQLHGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGM 371
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL-QGG 150
N+VSWT+M+ GY +G+ + A+ +F+ M+ SG++ ++ + + L AC+ + +G
Sbjct: 372 RHTNLVSWTSMMIGYGAHGHGKEAVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGL 431
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGGLAM 209
R + + + + ++DL ++ G +++A+ L E + + D W A++G A
Sbjct: 432 RYFRLMTSYYNVAPDRDIYACVVDLLSRAGRVKEAYELIENMPFKPDESIWVALLG--AC 489
Query: 210 QGFNDDSFWLFRSMMRQGMKPD 231
+ + S ++ MKP+
Sbjct: 490 KKYKQPSIQKLAALKVLEMKPN 511
>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 187/655 (28%), Positives = 332/655 (50%), Gaps = 105/655 (16%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD + +L C +H ++ +G+ +N+++ +I Y K G + A+K
Sbjct: 132 LDFFVFPVVLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKV 191
Query: 88 FDRMPER-----------------------------------NVVSWTAMISGYAQNGYD 112
+ M ++ NVV+W+A+I G++ N YD
Sbjct: 192 LEGMTQKDCVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYD 251
Query: 113 ENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSAL 172
++ +F+ M+ +GV + T +S L AC+RM+WL G+ + G I + N FV +AL
Sbjct: 252 VESVELFARMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANAL 311
Query: 173 LDLYAKCGWIEDAWILFERIERK-----------------------------------DV 197
+ +Y +CG ++ A+ +F + RK D
Sbjct: 312 VGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDR 371
Query: 198 VSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDL 257
+SWN MI G DD+ LFR ++ +G++PD FTLGSIL + + +IH +
Sbjct: 372 ISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSI 431
Query: 258 IIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR------- 310
I GL+S++ + G+L+++Y K I +A + + + D + ALISG+AR
Sbjct: 432 AIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKI 491
Query: 311 ---------------------------DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNI 343
++ A LF +M + + D + ++L
Sbjct: 492 RELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAA 551
Query: 344 CANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISW 403
C+ +A+++ G+Q+HA++ + DA +G L+DMYAK G I + ++++ + N++
Sbjct: 552 CSKLATIHRGKQVHAYSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCH 611
Query: 404 TSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMIN 463
+++ YA HG+G E I ++++M + P+ VTFLS+L +C H G G+E F ++
Sbjct: 612 NAMLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVTFLSVLSSCVHAGSIKIGYECFY-LME 670
Query: 464 KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGE 523
Y I P +H++C+VDL +R G+L+ AY +I+ M ++ + WSA+LG C I+ +LGE
Sbjct: 671 TYNITPTLKHYTCMVDLLSRAGKLDEAYQLIKNMPMEADSVTWSALLGGCFIHKEVALGE 730
Query: 524 LAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+AA L ++EP + NYV+L+N+Y +AG W + KTR+LM ++ ++K+PG S+++
Sbjct: 731 IAAEKLIELEPSNTGNYVLLANLYASAGRWHDLAKTRELMNDKGMQKSPGCSWIE 785
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 148/630 (23%), Positives = 276/630 (43%), Gaps = 111/630 (17%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L +TY ++LQ +Q +H+H I G+ ++ + TK++ Y+ A
Sbjct: 32 LTSTTYSTILQSSNSLTLGKQ---LHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHM 88
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV--RANQFTYSSALRACARMR 145
FD+M +N+ SWTA++ + G ++F L G+ + + F + L C +
Sbjct: 89 FDKMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLG 148
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN---- 201
L+ GR + G + K FV N++V +AL+D+Y KCG +++A + E + +KD VSWN
Sbjct: 149 DLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIIT 208
Query: 202 -------------------------------AMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
A+IGG + ++ +S LF M+ G+ P
Sbjct: 209 ACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAP 268
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
D TL S+L A L ++H I++ L S+ + +L+ +Y + G ++SA++++
Sbjct: 269 DARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIF 328
Query: 291 RSMLKTDIISCTALISGFARDDNHSK---------------------------------- 316
+ S +I G+ + N K
Sbjct: 329 SKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFD 388
Query: 317 EAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALI 376
+A LF+D++++ + D L +L A++ + G++IH+ A ++ VG AL+
Sbjct: 389 DALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALV 448
Query: 377 DMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDV 436
+MY K +I A AFDE+ +++ +W +LI+GYA+ + EL ++MK +G PN
Sbjct: 449 EMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVY 508
Query: 437 TFLSLLFACSHTGLTCEGWELFTDM------------------INKYRILPRAEHF---- 474
T+ S+L +LF +M +K + R +
Sbjct: 509 TWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQVHAYS 568
Query: 475 ------------SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLG 522
+ +VD++A+ G ++ Y + +++ P +A+L A +++G+ G
Sbjct: 569 IRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKIS-NPNLVCHNAMLTAYAMHGHGEEG 627
Query: 523 ELAARNLFD--MEPEKSVNYVVLSNIYTAA 550
+ R + D + P+ VLS+ A
Sbjct: 628 IVIFRRMLDSRVRPDHVTFLSVLSSCVHAG 657
>gi|449444600|ref|XP_004140062.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Cucumis sativus]
Length = 747
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 191/582 (32%), Positives = 323/582 (55%), Gaps = 9/582 (1%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDP--STYMSLLQFCIDKKAERQAHLIHAHIITNG 60
+V NF G + L + + P S+ + ++Q + K Q H +I +G
Sbjct: 119 MVHGNFSNGSIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSG 178
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN-VVSWTAMISGYAQNGYDENALLVF 119
+ + L + ++ YA+V + A K F M RN VVSW+ MI G+ Q G DE L+F
Sbjct: 179 FSAILSVQNSLLSLYAEV-HMYFAHKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMF 237
Query: 120 SAML-RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
M+ +G+ + T S L+AC ++ + G M+ G + ++LFV ++L+D+Y+K
Sbjct: 238 RNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSK 297
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
C + A+ F+ I K+++SWN M+ + + ++ L +M+R+G + D TL ++
Sbjct: 298 CFNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANV 357
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
L+ + ++ +K +H +II+ G ES+ L S+ID YAK + A ++ M K D+
Sbjct: 358 LQIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDV 417
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
++ + +I+GFAR+ EA +FK M + + + I+ LM CA A L + H
Sbjct: 418 VAWSTMIAGFARN-GKPDEAISVFKQMNEEVIPNNVSIMNLM-EACAVSAELRQSKWAHG 475
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHE 418
A + + + +G ++IDMY+K G+I + RAF+++ KNV+ W+++I+ + +G HE
Sbjct: 476 IAVRRGLASEVDIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHE 535
Query: 419 AIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVV 478
A+ L++K+K G PN VT LSLL ACSH GL EG FT M+ K+ I P EH+SC+V
Sbjct: 536 ALMLFEKIKQNGTKPNAVTALSLLSACSHGGLMEEGLSFFTSMVQKHGIEPGLEHYSCIV 595
Query: 479 DLFARRGQLESAYNMIRQM--NIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEK 536
D+ +R G+ A +I ++ ++ AS+W +L +C YGN SLG AA + +EP
Sbjct: 596 DMLSRAGKFNEALELIEKLPKEMEAGASIWGTLLSSCRSYGNISLGSGAASRVLQLEPLS 655
Query: 537 SVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
S Y++ SN+Y G ++ K R+L +E+ ++ GYS +
Sbjct: 656 SAGYMLASNLYANCGLMIDSAKMRRLAKEKGVKVVAGYSLVH 697
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 136/471 (28%), Positives = 245/471 (52%), Gaps = 13/471 (2%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H +I G +S+ ++ I FY K GD+ SA++AFD ++ VSW M+ G NG
Sbjct: 69 MHGCLIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGS 128
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
L F + + N + ++A ++ G G I + F L V+++
Sbjct: 129 IMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNS 188
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ-GMKP 230
LL LYA+ + E R DVVSW+ MIGG G ++ F +FR+M+ + G+ P
Sbjct: 189 LLSLYAEVHMYFAHKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPP 248
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
D T+ S+L+A ++ + +H L+I GLE + SLID+Y+K ++ SA++ +
Sbjct: 249 DGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAF 308
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
+ + + +IIS ++S + +++H EA L M+ + D+V L +L I +
Sbjct: 309 KEIPEKNIISWNLMLSAYILNESH-LEALALLGTMVREGAEKDEVTLANVLQIAKHFLDS 367
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
R +H + + + N++ID YAK + A FD M K+V++W+++IAG+
Sbjct: 368 LKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGF 427
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG-LTCEGWELFTDMINKYRILP 469
A++G EAI ++K+M E ++PN+V+ ++L+ AC+ + L W + + +
Sbjct: 428 ARNGKPDEAISVFKQMNEE-VIPNNVSIMNLMEACAVSAELRQSKWA--HGIAVRRGLAS 484
Query: 470 RAEHFSCVVDLFARRGQLES---AYNMIRQMNIKPTASLWSAILGACSIYG 517
+ + ++D++++ G +E+ A+N I Q N+ WSA++ A I G
Sbjct: 485 EVDIGTSIIDMYSKCGDIEASIRAFNQIPQKNV----VCWSAMISAFRING 531
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 208/447 (46%), Gaps = 56/447 (12%)
Query: 113 ENALLVFSAMLRSGVR-ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ AL ++ + SG + ++ + S L+AC+ + G M G + K + + ++
Sbjct: 29 QEALQLYHEIRISGAQLSDTWVLPSILKACSNTSFNLGTAM-HGCLIKQGCQSSTSIANS 87
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSF-----WLFRSMMRQ 226
+D Y K G ++ A F+ + KD VSWN M+ G F++ S W +
Sbjct: 88 TIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHG----NFSNGSIMAGLCWFIKGRFAH 143
Query: 227 GMKPDCFTLGSILRASVGGIELMKISQ---IHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
+P+ +L +++A EL SQ H I + G + + SL+ +YA+ +
Sbjct: 144 -FQPNISSLLLVIQAFR---ELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEV-HM 198
Query: 284 RSAYQLYRSM-LKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI--DDVILCLM 340
A++L+ M ++ D++S + +I GF + ++ F +F++M+ + GI D V + +
Sbjct: 199 YFAHKLFGEMSVRNDVVSWSVMIGGFVQ-IGEDEQGFLMFRNMV-TEAGIPPDGVTVVSV 256
Query: 341 LNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNV 400
L C N+ ++LG +H D VGN+LIDMY+K + A +AF E+ +KN+
Sbjct: 257 LKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNI 316
Query: 401 ISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH--TGLTC------ 452
ISW +++ Y + EA+ L M EG ++VT ++L H L C
Sbjct: 317 ISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSVHGV 376
Query: 453 ---EGWE----LFTDMINKYRILPRAE---------------HFSCVVDLFARRGQLESA 490
+G+E L +I+ Y E +S ++ FAR G+ + A
Sbjct: 377 IIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEA 436
Query: 491 YNMIRQMN--IKPTASLWSAILGACSI 515
++ +QMN + P ++ AC++
Sbjct: 437 ISVFKQMNEEVIPNNVSIMNLMEACAV 463
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 4/215 (1%)
Query: 316 KEAFDLFKDMILKKMGIDDV-ILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNA 374
+EA L+ ++ + + D +L +L C+N S NLG +H K ++ N+
Sbjct: 29 QEALQLYHEIRISGAQLSDTWVLPSILKACSNT-SFNLGTAMHGCLIKQGCQSSTSIANS 87
Query: 375 LIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
ID Y K G++ A RAFD +K+ +SW ++ G +G + + K + PN
Sbjct: 88 TIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRFAHFQPN 147
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI 494
+ L ++ A + +G+ F I + + ++ L+A + A+ +
Sbjct: 148 ISSLLLVIQAFRELKIYSQGFA-FHGYIFRSGFSAILSVQNSLLSLYAEV-HMYFAHKLF 205
Query: 495 RQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
+M+++ WS ++G G G L RN+
Sbjct: 206 GEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNM 240
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 176/549 (32%), Positives = 312/549 (56%), Gaps = 7/549 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ ++L D+ +HA I+ NG+E + +I Y K V A FD M
Sbjct: 207 TFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSM 266
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
R+ V+W MI GYA G+ +F M +GV+ ++ + +AL+ C++ R L +
Sbjct: 267 VVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTK 326
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER-KDVVSWNAMIGGLAMQ 210
+ + K + +++AL+ Y+KC +++A+ LF + +VV+W AMIGG
Sbjct: 327 QLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQN 386
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
N+ + LF M R+G++P+ FT ++L + +SQ+H IIK E +
Sbjct: 387 NNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSL----LSQLHAQIIKAYYEKVPSVA 442
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
+L+D Y K G++ + +++ S+ DI++ +A+++G A+ + S++A ++F ++ + +
Sbjct: 443 TALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRD-SEKAMEVFIQLVKEGV 501
Query: 331 GIDDVILCLMLNICAN-VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
++ ++N C++ A++ G+QIHA A K S V +AL+ MY+K G I A
Sbjct: 502 KPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAE 561
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
+ F +++++SW S+I GY +HG +A+E+++ M+++G+ +DVTF+ +L AC+H G
Sbjct: 562 KVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAG 621
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
L EG + F MI Y I + EH+SC+VDL++R G + A ++I M + ++W +
Sbjct: 622 LVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTL 681
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
L AC ++ N LG+LAA L ++P +V YV+LSNI+ AG W+ RKLM+ER ++
Sbjct: 682 LAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVK 741
Query: 570 KNPGYSFLQ 578
K G S+++
Sbjct: 742 KEAGCSWIE 750
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 153/548 (27%), Positives = 270/548 (49%), Gaps = 28/548 (5%)
Query: 28 LDPSTYMSLLQFC---IDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
+D T L+ C D+ RQ +H + +G+ ++ + T ++ Y K D
Sbjct: 102 VDGLTLSCALKVCGVLFDQVVGRQ---VHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDG 158
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
R FD M +NVVSWT+++SGYA+NG ++ + + + M GV N FT+++ L A A
Sbjct: 159 RGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADE 218
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
++GG + I K F FV +AL+ +Y K + DA +F+ + +D V+WN MI
Sbjct: 219 SIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMI 278
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
GG A GF + F +F M G+K + L+ EL Q+H ++K G E
Sbjct: 279 GGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYE 338
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT--DIISCTALISGFARDDNHSKEAFDLF 322
+ + +L+ Y+K S+ A++L+ SM ++++ TA+I GF +++N+ K A DLF
Sbjct: 339 FAQDIRTALMVTYSKCSSVDEAFKLF-SMADAAHNVVTWTAMIGGFVQNNNNEK-AVDLF 396
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
M + G+ + +SL Q+HA K +V AL+D Y K+
Sbjct: 397 CQM--SREGVRPNHFTYSTVLAGKPSSLL--SQLHAQIIKAYYEKVPSVATALLDAYVKT 452
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
G + ++ R F + K++++W++++ G A+ +A+E++ ++ EG+ PN+ TF S++
Sbjct: 453 GNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVI 512
Query: 443 FACSHTGLTCE-GWELFTDMIN--KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
ACS + T E G ++ + K L + S ++ +++++G +ESA + +
Sbjct: 513 NACSSSAATVEHGKQIHATAVKSGKSNALCVS---SALLTMYSKKGNIESAEKVFTRQEE 569
Query: 500 KPTASLWSAILGACSIYGNTSLGELAARNLFDME----PEKSVNYVVLSNIYTAAGAWDN 555
+ S S I G YG + A M+ P V ++ + T AG +
Sbjct: 570 RDIVSWNSMITG----YGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEE 625
Query: 556 ARKTRKLM 563
K +M
Sbjct: 626 GEKYFNIM 633
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 112/430 (26%), Positives = 214/430 (49%), Gaps = 12/430 (2%)
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
A + FD P +++ + ++ +++N +D AL +F + SG+ + T S AL+ C
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
+ GR + K F+E++ V ++L+D+Y K ED +F+ + K+VVSW ++
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGL 263
+ G A G ND+ L M +G+ P+ FT ++L A + Q+H +I+K G
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
E + + +LI +Y K + A ++ SM+ D ++ +I G+A + E F +F
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFY-LEGFQMFH 295
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
M L + + + C L +C+ LN +Q+H K + + AL+ Y+K
Sbjct: 296 RMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCS 355
Query: 384 EIADANRAFDEMGD--KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
+ +A + F M D NV++WT++I G+ ++ +A++L+ +M EG+ PN T+ ++
Sbjct: 356 SVDEAFKLFS-MADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTV 414
Query: 442 LFACSHTGLTCEGWELFTDMINK-YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIK 500
L + L+ +L +I Y +P + ++D + + G + + + + K
Sbjct: 415 LAGKPSSLLS----QLHAQIIKAYYEKVPSVA--TALLDAYVKTGNVVESARVFYSIPAK 468
Query: 501 PTASLWSAIL 510
+ WSA+L
Sbjct: 469 DIVA-WSAML 477
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 95/161 (59%), Gaps = 1/161 (0%)
Query: 284 RSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNI 343
R A+QL+ DI L+ F+R+ NH +EA LFKD+ +G+D + L L +
Sbjct: 55 RYAHQLFDETPLKDISHYNRLLFDFSRN-NHDREALHLFKDLHSSGLGVDGLTLSCALKV 113
Query: 344 CANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISW 403
C + +GRQ+H + K D +VG +L+DMY K+ + D FDEMG KNV+SW
Sbjct: 114 CGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSW 173
Query: 404 TSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
TSL++GYA++G E I L +M+ EG+ PN TF ++L A
Sbjct: 174 TSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGA 214
>gi|357484133|ref|XP_003612353.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513688|gb|AES95311.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 188/551 (34%), Positives = 308/551 (55%), Gaps = 9/551 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ SLL+ C + IH + G E ++ + + ++ YAK DV S RK F
Sbjct: 251 DRITFASLLKCC---SVLNEVMQIHGIVYKFGAEVDVVVESAMVDLYAKCRDVSSCRKIF 307
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D M +++ W++MISGY N E A+ F M R V+ +Q SS L+AC + L
Sbjct: 308 DSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLKACVEIEDLN 367
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G + G + K + FV S LL+LYA G + D LF RI+ KD+V+WN+MI A
Sbjct: 368 TGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKLFSRIDDKDIVAWNSMILAQA 427
Query: 209 MQGFN-DDSFWLFRSMMRQG-MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
G LF+ + R ++ TL ++L++ +L QIH LI+K L
Sbjct: 428 RPGQGCGRCMQLFQELRRTTFLQIQGATLVAVLKSCEKDSDLPAGRQIHSLIVKSSLCRH 487
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ +L+ +Y++ I A++ + +++ D S +++I G + + +A +L K+M+
Sbjct: 488 TLVGNALVHMYSECKQIDDAFKAFVDIVRKDDSSWSSII-GTCKQNRMESKALELCKEML 546
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ + L L ++ C+ + +++ G+Q+H FA K S D +G+++IDMYAK G I
Sbjct: 547 DEGINFTSYSLPLCISACSQLLTISEGKQLHVFAIKSGYSCDVYIGSSIIDMYAKCGNIE 606
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
++ + FDE N +++ ++I+GYA HG +AIE+ K++ G+ PN VTFL+L+ ACS
Sbjct: 607 ESEKVFDEQLKPNEVTFNAIISGYAHHGKAQQAIEVLSKLEKNGVAPNHVTFLALMSACS 666
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
H G E LFT M++KY+I P++EH+SC+VD + R G+LE AY ++++ + S W
Sbjct: 667 HAGYVEETSHLFTLMLDKYKIKPKSEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAW 723
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
+L AC + N +GE +A + ++ P Y++LSNIY G W+ A RK M +
Sbjct: 724 RTLLSACRNHSNRKIGEKSAMKMIELNPSDHAPYILLSNIYIEEGNWEEALNCRKKMAKI 783
Query: 567 SLRKNPGYSFL 577
++K+PG S+L
Sbjct: 784 RVKKDPGNSWL 794
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 141/470 (30%), Positives = 240/470 (51%), Gaps = 10/470 (2%)
Query: 48 QAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYA 107
Q + IHA +I Y S HL+ ++ FY+K + A K FD+MP RNVV+WT +IS +
Sbjct: 66 QCNQIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISSHL 125
Query: 108 QNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLF 167
+ G A +F+ M S R N+ T++ LRAC G I G + + F
Sbjct: 126 KYGSVSKAFEMFNHMRVSDERPNENTFAVLLRACTNRELWSVGLQIHGLLVRCGLEREKF 185
Query: 168 VKSALLDLYAKCG-WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM-MR 225
S+L+ +Y K G + DA +F + +DVV+WN MI G A G LF M
Sbjct: 186 AGSSLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSEMWEE 245
Query: 226 QGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRS 285
QG+KPD T S+L+ E+M QIH ++ K G E + +++D+YAK + S
Sbjct: 246 QGLKPDRITFASLLKCCSVLNEVM---QIHGIVYKFGAEVDVVVESAMVDLYAKCRDVSS 302
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
+++ SM K D +++ISG+ +N +EA + FKDM +++ +D +L L C
Sbjct: 303 CRKIFDSMEKKDNFVWSSMISGYTM-NNRGEEAVNFFKDMCRQRVKLDQHVLSSTLKACV 361
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
+ LN G Q+H K D V + L+++YA GE+ D + F + DK++++W S
Sbjct: 362 EIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKLFSRIDDKDIVAWNS 421
Query: 406 LIAGYAKHGYG-HEAIELYKKMKHEGMVP-NDVTFLSLLFACSHTGLTCEGWELFTDMIN 463
+I A+ G G ++L+++++ + T +++L +C G ++ + +I
Sbjct: 422 MILAQARPGQGCGRCMQLFQELRRTTFLQIQGATLVAVLKSCEKDSDLPAGRQIHS-LIV 480
Query: 464 KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGAC 513
K + + +V +++ Q++ A+ + ++ S WS+I+G C
Sbjct: 481 KSSLCRHTLVGNALVHMYSECKQIDDAFKAFVDI-VRKDDSSWSSIIGTC 529
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 143/527 (27%), Positives = 259/527 (49%), Gaps = 24/527 (4%)
Query: 3 IVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
++ ++ K G + +A + + D + +T+ LL+ C +++ IH ++ G
Sbjct: 120 LISSHLKYGSVSKAFEMFNHMRVSDERPNENTFAVLLRACTNRELWSVGLQIHGLLVRCG 179
Query: 61 YESNLHLSTKVIIFYAKVGDVL-SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
E + ++ Y K GD L A + F + ER+VV+W MISG+AQNG +F
Sbjct: 180 LEREKFAGSSLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLF 239
Query: 120 SAMLRS-GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
S M G++ ++ T++S L+ C+ + + I G + K ++ V+SA++DLYAK
Sbjct: 240 SEMWEEQGLKPDRITFASLLKCCSVLNEVM---QIHGIVYKFGAEVDVVVESAMVDLYAK 296
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
C + +F+ +E+KD W++MI G M +++ F+ M RQ +K D L S
Sbjct: 297 CRDVSSCRKIFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQRVKLDQHVLSST 356
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
L+A V +L Q+H L+IK G ++ + L+++YA +G + +L+ + DI
Sbjct: 357 LKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKLFSRIDDKDI 416
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKK-MGIDDVILCLMLNICANVASLNLGRQIH 357
++ ++I AR LF+++ + I L +L C + L GRQIH
Sbjct: 417 VAWNSMILAQARPGQGCGRCMQLFQELRRTTFLQIQGATLVAVLKSCEKDSDLPAGRQIH 476
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
+ K VGNAL+ MY++ +I DA +AF ++ K+ SW+S+I ++
Sbjct: 477 SLIVKSSLCRHTLVGNALVHMYSECKQIDDAFKAFVDIVRKDDSSWSSIIGTCKQNRMES 536
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSC- 476
+A+EL K+M EG+ + + ACS EG +L + +SC
Sbjct: 537 KALELCKEMLDEGINFTSYSLPLCISACSQLLTISEGKQL--------HVFAIKSGYSCD 588
Query: 477 ------VVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
++D++A+ G +E + + + +KP ++AI+ + +G
Sbjct: 589 VYIGSSIIDMYAKCGNIEESEKVFDE-QLKPNEVTFNAIISGYAHHG 634
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 191/391 (48%), Gaps = 10/391 (2%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD S L+ C++ + +H +I NG++++ +++ ++ YA G++ K
Sbjct: 348 LDQHVLSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKL 407
Query: 88 FDRMPERNVVSWTAMISGYAQNGYD-ENALLVFSAMLRSG-VRANQFTYSSALRACARMR 145
F R+ ++++V+W +MI A+ G + +F + R+ ++ T + L++C +
Sbjct: 408 FSRIDDKDIVAWNSMILAQARPGQGCGRCMQLFQELRRTTFLQIQGATLVAVLKSCEKDS 467
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
L GR I I K + V +AL+ +Y++C I+DA+ F I RKD SW+++IG
Sbjct: 468 DLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSECKQIDDAFKAFVDIVRKDDSSWSSIIG 527
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
+ L + M+ +G+ ++L + A + + + Q+H IK G
Sbjct: 528 TCKQNRMESKALELCKEMLDEGINFTSYSLPLCISACSQLLTISEGKQLHVFAIKSGYSC 587
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ S+ID+YAK G+I + +++ LK + ++ A+ISG+A +++A ++ +
Sbjct: 588 DVYIGSSIIDMYAKCGNIEESEKVFDEQLKPNEVTFNAIISGYAH-HGKAQQAIEVLSKL 646
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF---KYQSSYDAAVGNALIDMYAKS 382
+ + V +++ C++ + H F KY+ + + L+D Y ++
Sbjct: 647 EKNGVAPNHVTFLALMSACSHAGYVE--ETSHLFTLMLDKYKIKPKSEHYSCLVDAYGRA 704
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKH 413
G + +A + + G ++ +W +L++ H
Sbjct: 705 GRLEEAYQIVQKDGSES--AWRTLLSACRNH 733
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 139/289 (48%), Gaps = 11/289 (3%)
Query: 246 IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALI 305
I L + +QIH +I S L +L+ Y+K + A++L+ M ++++ T LI
Sbjct: 62 IILTQCNQIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLI 121
Query: 306 SGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS 365
S + + SK AF++F M + ++ ++L C N ++G QIH +
Sbjct: 122 SSHLKYGSVSK-AFEMFNHMRVSDERPNENTFAVLLRACTNRELWSVGLQIHGLLVRCGL 180
Query: 366 SYDAAVGNALIDMYAKSG-EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
+ G++L+ MY K G ++ DA R F + +++V++W +I+G+A++G L+
Sbjct: 181 EREKFAGSSLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFS 240
Query: 425 KM-KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFAR 483
+M + +G+ P+ +TF SLL CS + ++ K+ S +VDL+A+
Sbjct: 241 EMWEEQGLKPDRITFASLLKCCSVLNEVMQ----IHGIVYKFGAEVDVVVESAMVDLYAK 296
Query: 484 RGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDM 532
+ S + M K +WS+++ Y + GE A DM
Sbjct: 297 CRDVSSCRKIFDSME-KKDNFVWSSMISG---YTMNNRGEEAVNFFKDM 341
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 61/113 (53%)
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWT 404
+N L QIHA Q + N L+ Y+KS A++ FD+M ++NV++WT
Sbjct: 59 SNPIILTQCNQIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWT 118
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWEL 457
+LI+ + K+G +A E++ M+ PN+ TF LL AC++ L G ++
Sbjct: 119 TLISSHLKYGSVSKAFEMFNHMRVSDERPNENTFAVLLRACTNRELWSVGLQI 171
>gi|297841909|ref|XP_002888836.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334677|gb|EFH65095.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 744
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 198/592 (33%), Positives = 319/592 (53%), Gaps = 23/592 (3%)
Query: 4 VRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGY-- 61
+R ++G L++AL P L Y +L Q C D++ R +H H++++ Y
Sbjct: 33 LRTLVRSGDLRRALSLFYCAPVELQSQHAYAALFQACADQRNLRDGINLHHHMLSHPYCY 92
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSA 121
N+ L+ +I YAK G++L AR+ FD MPERNVVSWTA+I+GYAQ G +++ +FS+
Sbjct: 93 SQNVILANYLITMYAKCGNILYARQVFDTMPERNVVSWTALITGYAQAGNEQDGFCLFSS 152
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC-- 179
ML + N+F SS L C R+ + G+ + G K +++V +AL+ +Y +C
Sbjct: 153 ML-AHCCPNEFALSSVLTLC---RY-EPGKQVHGLALKLGLYCSIYVANALISMYGRCHD 207
Query: 180 -GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
+AW +FE +E K++V+WN+MI + +F M G+ D T+ +I
Sbjct: 208 GTAAYEAWTVFEAMEFKNLVTWNSMIAAFQCCNLGKQAIGVFMRMHSDGVGFDRATVLNI 267
Query: 239 LRA--SVGGIELMKIS----QIHDLIIKLGLESSNKLTGSLIDVYAK-YGSIRSAYQLYR 291
++ ++S Q+H L +K GL + ++ +L+ VY++ G Y+L+
Sbjct: 268 CTTLYKSSDLDPDQVSKCCLQLHSLTVKSGLVTQTEVATALVKVYSEILGEFTDCYKLFM 327
Query: 292 SMLKT-DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
M DI++ T +I+ FA D + A LF + +K+ D +L CA + +
Sbjct: 328 EMSHCRDIVAWTGIITAFAVYD--PERAILLFGQLRHEKLSPDWYTFSSVLKACAGLVTA 385
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
IHA K + D V N+LI YAK G + R FD+M ++V+SW SL+ Y
Sbjct: 386 RHALSIHAQVIKGGFATDTVVNNSLIHAYAKCGSLDLCKRVFDDMDSRDVVSWNSLLKAY 445
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
+ HG + +++KM + P+ TF++LL ACSH G EG +F M K LP+
Sbjct: 446 SLHGQVDSILPVFQKMD---IKPDSATFIALLSACSHAGRVKEGLRIFRSMFEKPETLPQ 502
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
H++CV+D+ R + A +I+QM + P A +WS +LG+C +GNT LG+LAA L
Sbjct: 503 LNHYACVIDMLGRAERFAEAEEVIKQMPMGPDAVVWSTLLGSCRKHGNTQLGKLAADKLK 562
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
++EP S++Y+ +SNIY A +++ K+ K ME +RK PG S + K
Sbjct: 563 EIEPTNSLSYIQMSNIYNAESSFNEGNKSIKEMETWRVRKEPGLSCTEIGNK 614
>gi|359493563|ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g71420-like [Vitis vinifera]
Length = 741
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 193/587 (32%), Positives = 327/587 (55%), Gaps = 17/587 (2%)
Query: 1 MNIVRANFKTGQLKQALK--FSLSCPDTLLDPS-TYMSLLQFCIDKKAERQAHLIHAHII 57
++ +R G L++ALK +S++ P L+ TY +L Q C + + + +H H+
Sbjct: 31 LHHIRLLCSRGHLQEALKLFYSITPPPPLVHSHHTYAALFQACARRSSLPEGQALHRHMF 90
Query: 58 TNGYES--NLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENA 115
+ S NL L+ V+ YAK G + A + FD MPE+N+VSWTA++SGYAQ+G
Sbjct: 91 LHNPNSDFNLFLTNHVVNMYAKCGSLDYAHQMFDEMPEKNIVSWTALVSGYAQHGRSNEC 150
Query: 116 LLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDL 175
VF ML + +F ++S + AC GR + K F ++V +AL+ +
Sbjct: 151 FRVFRGMLIWH-QPTEFAFASVISACGGDD--NCGRQVHALALKTSFDSCVYVGNALIMM 207
Query: 176 YAK-CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFT 234
Y K CG ++AW ++E + +++VSWN+MI G + G + + LF M G++ D T
Sbjct: 208 YCKSCGGADEAWNVYEAMGFRNLVSWNSMIAGFQVCGCGNRALELFSQMHVGGIRFDRAT 267
Query: 235 LGSILRASVG-GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYG-SIRSAYQLYRS 292
L SI G G L Q+ L IK G ++ +L+ Y+ G + Y+++
Sbjct: 268 LVSIFSCLCGMGDGLECCFQLQCLTIKTGFILKIEVATALVKAYSSLGGEVSDCYRIFLE 327
Query: 293 M-LKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
+ + D++S T +I+ FA D K+A +F+ + + + D + ++L CA +A+
Sbjct: 328 LDGRQDVVSWTGIIAAFAERD--PKKALVIFRQFLRECLAPDRHMFSIVLKACAGLATER 385
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
+ + K D + NALI A+ G +A + + FD+MG ++ +SW S++ YA
Sbjct: 386 HALTVQSHVLKVGFEDDIVLANALIHACARCGSVALSKQVFDKMGSRDTVSWNSMLKAYA 445
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
HG G EA+ L+ +M + P+ TF++LL ACSH G+ EG ++F M N + I+P+
Sbjct: 446 MHGQGKEALLLFSQMDAQ---PDGATFVALLSACSHAGMAEEGAKIFETMSNNHGIVPQL 502
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
+H++C+VD+ R GQ+ A +I +M ++P + +WSA+LG+C +G T L +LAA L +
Sbjct: 503 DHYACMVDILGRAGQISEAKELIDKMPMEPDSVVWSALLGSCRKHGETKLAKLAAVKLKE 562
Query: 532 MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
++P S+ YV++SNI+ G ++ AR R+ ME + +RK PG S+++
Sbjct: 563 LDPNNSLGYVLMSNIFCTDGRFNEARLIRREMEGKIVRKEPGLSWIE 609
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 195/609 (32%), Positives = 315/609 (51%), Gaps = 70/609 (11%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y LL+ C D K IH HII + L ++ YAK + AR+ FD+MP
Sbjct: 18 YCELLKHCRDTKK------IHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMP 71
Query: 93 ERNV-------------------------------VSWTAMISGYAQNGYDENALLVFSA 121
+RN+ VSW ++IS YA G+ ++ ++
Sbjct: 72 QRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNL 131
Query: 122 MLRSG-VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK-- 178
ML +G N+ S+ L ++ + G + G + K F +FV S L+D+Y+K
Sbjct: 132 MLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTG 191
Query: 179 -----------------------------CGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
C IED+ LF ++ KD +SW AMI G
Sbjct: 192 LVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQ 251
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
G + ++ LFR M + ++ D +T GS+L A G + L + Q+H II+ + + +
Sbjct: 252 NGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFV 311
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+L+D+Y K SI+SA ++R M +++S TA++ G+ ++ +S+EA +F DM
Sbjct: 312 GSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQN-GYSEEAVKIFCDMQNNG 370
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ DD L +++ CAN+ASL G Q H A V NAL+ +Y K G I D++
Sbjct: 371 IEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSH 430
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
R F EM + +SWT+L++GYA+ G +E + L++ M G P+ VTF+ +L ACS G
Sbjct: 431 RLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAG 490
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
L +G ++F MI ++RI+P +H++C++DLF+R G+LE A I +M P A W+++
Sbjct: 491 LVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASL 550
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
L +C + N +G+ AA +L +EP + +Y++LS+IY A G W+ RK M ++ LR
Sbjct: 551 LSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLR 610
Query: 570 KNPGYSFLQ 578
K PG S+++
Sbjct: 611 KEPGCSWIK 619
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 145/284 (51%), Gaps = 8/284 (2%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D T+ S+L C A ++ +HA+II Y+ N+ + + ++ Y K + SA
Sbjct: 272 MDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETV 331
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F +M +NVVSWTAM+ GY QNGY E A+ +F M +G+ + FT S + +CA + L
Sbjct: 332 FRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASL 391
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G + + V +AL+ LY KCG IED+ LF + D VSW A++ G
Sbjct: 392 EEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGY 451
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIK----LGL 263
A G +++ LF SM+ G KPD T +L A + K +QI + +IK + +
Sbjct: 452 AQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPI 511
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALIS 306
E +ID++++ G + A + M D I +L+S
Sbjct: 512 EDH---YTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLS 552
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 179/496 (36%), Positives = 282/496 (56%), Gaps = 10/496 (2%)
Query: 90 RMPERNVVSWTAMISGYAQ--NGYD-ENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
+ P R V + +++ +A + +D A+ AM R GV A+ TYS ++ C+
Sbjct: 11 KPPLRYVADPSPLVNEFANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGA 70
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
+Q G+ + I + +FV + LL++Y K +E+A LF+ + ++VVSW MI
Sbjct: 71 VQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISA 130
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
+ + ND + M R+G++P+ FT S+LRA G L + Q+H IIK GLES
Sbjct: 131 YSNK-LNDKALKCLILMFREGVRPNMFTYSSVLRACDG---LPNLRQLHCGIIKTGLESD 186
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ +LIDVY+K+ + +A ++ M D++ ++I GFA++ + EA +LFK M
Sbjct: 187 VFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSD-GNEALNLFKRMK 245
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
D L +L C +A L LGRQ+H K+ D + NALIDMY K G +
Sbjct: 246 RAGFLADQATLTSVLRACTGLALLELGRQVHVHVLKFDQ--DLILNNALIDMYCKCGSLE 303
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
DAN AF M +K+VISW++++AG A++GY +A+EL++ MK G PN +T L +LFACS
Sbjct: 304 DANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACS 363
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
H GL +GW F M + + P EH+ C++DL R G+L+ A +I +M +P + W
Sbjct: 364 HAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTW 423
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
+LGAC ++ N L AA+ + ++EPE + Y++LSNIY W++ + RK M R
Sbjct: 424 RTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNR 483
Query: 567 SLRKNPGYSFLQSSKK 582
+RK PG S+++ K+
Sbjct: 484 GIRKTPGCSWIEVDKQ 499
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 128/407 (31%), Positives = 208/407 (51%), Gaps = 23/407 (5%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY L++ C + A ++ +H HI GYE + + ++ Y K + A F
Sbjct: 54 DAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLF 113
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D MPERNVVSWT MIS Y+ N ++ AL M R GVR N FTYSS LRAC + L
Sbjct: 114 DEMPERNVVSWTTMISAYS-NKLNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNL- 171
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
R + I K ++FV+SAL+D+Y+K +++A +F+ + +D+V WN++IGG A
Sbjct: 172 --RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFA 229
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
+++ LF+ M R G D TL S+LRA G L Q+H ++K +
Sbjct: 230 QNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLI 287
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
L +LID+Y K GS+ A + M++ D+IS + +++G A+ + +S++A +LF+ M
Sbjct: 288 LNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQ-NGYSRQALELFESMKES 346
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG--------NALIDMYA 380
+ + + +L C++ + G + Y S G LID+
Sbjct: 347 GSRPNYITVLGVLFACSHAGLVEKG-------WYYFRSMKKLFGVDPGREHYGCLIDLLG 399
Query: 381 KSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
++G + +A + EM + + ++W +L+ H AI KK+
Sbjct: 400 RAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKI 446
>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 834
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 183/534 (34%), Positives = 300/534 (56%), Gaps = 5/534 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IHAHI+ G E + L +I Y K G V++A K F+ MP +N++SWT ++SGY QN
Sbjct: 271 IHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNAL 330
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ A+ +F++M + G++ + + SS L +CA + L G + K + +V ++
Sbjct: 331 HKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNS 390
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN---DDSFWLFRSMMRQGM 228
L+D+YAKC + DA +F+ DVV +NAMI G + G ++ +FR M + +
Sbjct: 391 LIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLI 450
Query: 229 KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQ 288
+P T S+LRAS L QIH L+ K GL +LIDVY+ ++ +
Sbjct: 451 RPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRL 510
Query: 289 LYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
++ M D++ ++ +G+ + + ++EA +LF ++ L + D+ M+ N+A
Sbjct: 511 VFDEMKVKDLVIWNSMFAGYVQQ-SENEEALNLFLELQLSRERPDEFTFANMVTAAGNLA 569
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA 408
S+ LG++ H K + + NAL+DMYAK G DA++AFD ++V+ W S+I+
Sbjct: 570 SVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVIS 629
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
YA HG G +A+++ +KM EG+ PN +TF+ +L ACSH GL +G + F M+ ++ I
Sbjct: 630 SYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIE 688
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARN 528
P EH+ C+V L R G+L A +I +M KP A +W ++L C+ GN L E AA
Sbjct: 689 PETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEM 748
Query: 529 LFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+P+ S ++ +LSNIY + G W A+K R+ M+ + K PG S++ +K+
Sbjct: 749 AILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKE 802
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 161/581 (27%), Positives = 284/581 (48%), Gaps = 48/581 (8%)
Query: 30 PSTYM--SLLQFC--IDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
P+ Y+ S +Q C +D + + + ++ +G++ ++++ T +I FY K G++ AR
Sbjct: 144 PNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYAR 203
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
FD +PE++ V+WT MISG + G +L +F ++ V + + S+ L AC+ +
Sbjct: 204 LVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILP 263
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
+L+GG+ I I + + + + L+D Y KCG + A LF + K+++SW ++
Sbjct: 264 FLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLS 323
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
G + ++ LF SM + G+KPD + SIL + L +Q+H IK L +
Sbjct: 324 GYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGN 383
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSK--EAFDLFK 323
+ +T SLID+YAK + A +++ D++ A+I G++R + EA ++F+
Sbjct: 384 DSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFR 443
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
DM + + + +L A++ SL L +QIH FKY + D G+ALID+Y+
Sbjct: 444 DMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCY 503
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL- 442
+ D+ FDEM K+++ W S+ AGY + EA+ L+ +++ P++ TF +++
Sbjct: 504 CLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVT 563
Query: 443 -------------FACS--HTGLTCEGW--ELFTDMINKYRILPRAEH------------ 473
F C GL C + DM K P H
Sbjct: 564 AAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGS-PEDAHKAFDSAASRDVV 622
Query: 474 -FSCVVDLFARRGQLESAYNMIRQM---NIKPTASLWSAILGACSIYGNTSLG----ELA 525
++ V+ +A G+ + A M+ +M I+P + +L ACS G G EL
Sbjct: 623 CWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELM 682
Query: 526 ARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
R F +EPE +YV + ++ AG + AR+ + M +
Sbjct: 683 LR--FGIEPETE-HYVCMVSLLGRAGRLNKARELIEKMPTK 720
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 172/557 (30%), Positives = 289/557 (51%), Gaps = 30/557 (5%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
+ LLQ +++H II G E + +LS +I Y++ G ++ ARK F++MP
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA-NQFTYSSALRACA----RMRWL 147
ERN+VSW+ M+S +G E +L+VF R+ + N++ SS ++AC+ R RW+
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWM 166
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+Q + K F +++V + L+D Y K G I+ A ++F+ + K V+W MI G
Sbjct: 167 V--FQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGC 224
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
G + S LF +M + PD + L ++L A L QIH I++ GLE
Sbjct: 225 VKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDA 284
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
L LID Y K G + +A++L+ M +IIS T L+SG+ ++ H KEA +LF M
Sbjct: 285 SLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALH-KEAMELFTSM-- 341
Query: 328 KKMGI-DDVILC-LMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
K G+ D+ C +L CA++ +L G Q+HA+ K D+ V N+LIDMYAK +
Sbjct: 342 SKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCL 401
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYG---HEAIELYKKMKHEGMVPNDVTFLSLL 442
DA + FD +V+ + ++I GY++ G HEA+ +++ M+ + P+ +TF+SLL
Sbjct: 402 TDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLL 461
Query: 443 FACSHTGLTCEGW-ELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
A + LT G + ++ KY + S ++D+++ L+ + + +M +K
Sbjct: 462 RASA--SLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKD 519
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLF---DMEPEKSVNYVVLSNIYTAAGAWDNARK 558
+W+++ Y S E A NLF + E+ + +N+ TAAG + +
Sbjct: 520 LV-IWNSMFAG---YVQQSENE-EALNLFLELQLSRERPDEF-TFANMVTAAGNLASVQL 573
Query: 559 TRKL---MEERSLRKNP 572
++ + +R L NP
Sbjct: 574 GQEFHCQLLKRGLECNP 590
>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
Length = 734
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 179/571 (31%), Positives = 311/571 (54%), Gaps = 3/571 (0%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K G+LK+A F + D + P +Y L + C ++ LIH + +
Sbjct: 64 KQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGS 123
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ ++ Y G + +K FD M +N+VSW +IS YA+NG E A+ +FS M SG
Sbjct: 124 IENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASG 183
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
+R N Y S L++C +L+ G+ + + + + N+ V++A+ ++Y +CGW+E A
Sbjct: 184 IRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAK 243
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
++F+ ++ ++ V+W ++ G + + LF M +G++ D F +L+
Sbjct: 244 LVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLE 303
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
+ QIH I+KLG ES + L+D Y K G I SAY+ + + + + +S +ALIS
Sbjct: 304 DWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALIS 363
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
GF++ ++ +F + + + ++ I + CA A+LN+G Q H A K
Sbjct: 364 GFSQS-GRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLV 422
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
+A++ MY+K G + A RAF+ + + + ++WT++I+GYA HG EA+ +++M
Sbjct: 423 SYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRM 482
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
+ G+ PN VTF+++L ACSH+GL E + M Y + P +H+ C++D ++R G
Sbjct: 483 QSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGL 542
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
L A +I +M +P A W ++LG C + + LG++AA NLF ++P + Y++L N+
Sbjct: 543 LXEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNL 602
Query: 547 YTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
Y+A G W+ A RKLM ER L+K S++
Sbjct: 603 YSAFGKWEEAGHVRKLMAERELKKEVSCSWI 633
>gi|186512044|ref|NP_001119013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635616|sp|P0C8Q2.1|PP323_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19191, mitochondrial; Flags: Precursor
gi|332658758|gb|AEE84158.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 192/537 (35%), Positives = 302/537 (56%), Gaps = 6/537 (1%)
Query: 51 LIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
++HAH+I + + S++ + T + + K V A K F+RMPER+ +W AM+SG+ Q+G
Sbjct: 73 MVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSG 132
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFVK 169
+ + A +F M + + + T + +++ + + L+ + I+ G V+ + V
Sbjct: 133 HTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQ-VTVA 191
Query: 170 SALLDLYAKCGWIEDAWILFERIERKD--VVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
+ + Y KCG ++ A ++FE I+R D VVSWN+M ++ G D+F L+ M+R+
Sbjct: 192 NTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREE 251
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
KPD T ++ + L + IH I LG + + + I +Y+K SA
Sbjct: 252 FKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSAR 311
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
L+ M +S T +ISG+A + EA LF MI D V L +++ C
Sbjct: 312 LLFDIMTSRTCVSWTVMISGYAEKGDMD-EALALFHAMIKSGEKPDLVTLLSLISGCGKF 370
Query: 348 ASLNLGRQIHAFAFKYQSSYD-AAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
SL G+ I A A Y D + NALIDMY+K G I +A FD +K V++WT++
Sbjct: 371 GSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTM 430
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYR 466
IAGYA +G EA++L+ KM PN +TFL++L AC+H+G +GWE F M Y
Sbjct: 431 IAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYN 490
Query: 467 ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAA 526
I P +H+SC+VDL R+G+LE A +IR M+ KP A +W A+L AC I+ N + E AA
Sbjct: 491 ISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAA 550
Query: 527 RNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKN 583
+LF++EP+ + YV ++NIY AAG WD + R +M++R+++K PG S +Q + KN
Sbjct: 551 ESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKN 607
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 205/436 (47%), Gaps = 26/436 (5%)
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
+V +W I +LL+F M R G N FT+ +ACAR+ + M+
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND 214
+ K F ++FV +A +D++ KC ++ A +FER+ +D +WNAM+ G G D
Sbjct: 76 AHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTD 135
Query: 215 DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLI 274
+F LFR M + PD T+ ++++++ L + +H + I+LG++ + + I
Sbjct: 136 KAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWI 195
Query: 275 DVYAKYGSIRSAYQLYRSMLKTD--IISCTALISGFARDDNHSKEAFDLFKDMILKKMGI 332
Y K G + SA ++ ++ + D ++S ++ ++ + +AF L+ M+ ++
Sbjct: 196 STYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSV-FGEAFDAFGLYCLMLREEFKP 254
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAF 392
D + C N +L GR IH+ A + D N I MY+KS + A F
Sbjct: 255 DLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLF 314
Query: 393 DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG-LT 451
D M + +SWT +I+GYA+ G EA+ L+ M G P+ VT LSL+ C G L
Sbjct: 315 DIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLE 374
Query: 452 CEGWELFTDMINKYRILPRAEHFSC----------VVDLFARRGQLESAYNMIRQMNIKP 501
W I RA+ + C ++D++++ G + A ++ K
Sbjct: 375 TGKW-----------IDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEK- 422
Query: 502 TASLWSAILGACSIYG 517
T W+ ++ ++ G
Sbjct: 423 TVVTWTTMIAGYALNG 438
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 141/273 (51%), Gaps = 14/273 (5%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D ST+++L C + + Q LIH+H I G + ++ I Y+K D SAR F
Sbjct: 255 DLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLF 314
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D M R VSWT MISGYA+ G + AL +F AM++SG + + T S + C + L+
Sbjct: 315 DIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLE 374
Query: 149 GGRMIQGSIQ-KGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ I G +N+ + +AL+D+Y+KCG I +A +F+ K VV+W MI G
Sbjct: 375 TGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGY 434
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMK-------ISQIHDLIIK 260
A+ G ++ LF M+ KP+ T ++L+A L K + Q+++ I
Sbjct: 435 ALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYN--IS 492
Query: 261 LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
GL+ + ++D+ + G + A +L R+M
Sbjct: 493 PGLDHYS----CMVDLLGRKGKLEEALELIRNM 521
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 174/367 (47%), Gaps = 11/367 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T M+L+Q +K+ + +HA I G + + ++ I Y K GD+ SA+ F
Sbjct: 152 DSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVF 211
Query: 89 DRMP--ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
+ + +R VVSW +M Y+ G +A ++ MLR + + T+ + +C
Sbjct: 212 EAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPET 271
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
L GR+I +++ + + +Y+K A +LF+ + + VSW MI G
Sbjct: 272 LTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISG 331
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMK-ISQIHDLIIKLGL 263
A +G D++ LF +M++ G KPD TL S++ G +E K I D+ G
Sbjct: 332 YAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADI---YGC 388
Query: 264 ESSN-KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
+ N + +LID+Y+K GSI A ++ + + +++ T +I+G+A + EA LF
Sbjct: 389 KRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIF-LEALKLF 447
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQ-IHAFAFKYQSSYDAAVGNALIDMYAK 381
MI + + +L CA+ SL G + H Y S + ++D+ +
Sbjct: 448 SKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGR 507
Query: 382 SGEIADA 388
G++ +A
Sbjct: 508 KGKLEEA 514
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 176/549 (32%), Positives = 311/549 (56%), Gaps = 7/549 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ ++L D+ +HA I+ NG+E + +I Y K V A FD M
Sbjct: 207 TFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSM 266
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
R+ V+W MI GYA G+ +F M +GV+ ++ + +AL+ C++ R L +
Sbjct: 267 VVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTK 326
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER-KDVVSWNAMIGGLAMQ 210
+ + K + +++AL+ Y+KC +++A+ LF + +VV+W AMIGG
Sbjct: 327 QLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQN 386
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
N + LF M R+G++P+ FT ++L + +SQ+H IIK E +
Sbjct: 387 NNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSL----LSQLHAQIIKAYYEKVPSVA 442
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
+L+D Y K G++ + +++ S+ DI++ +A+++G A+ + S++A ++F ++ + +
Sbjct: 443 TALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRD-SEKAMEVFIQLVKEGV 501
Query: 331 GIDDVILCLMLNICAN-VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
++ ++N C++ A++ G+QIHA A K S V +AL+ MY+K G I A
Sbjct: 502 KPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAE 561
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
+ F +++++SW S+I GY +HG +A+E+++ M+++G+ +DVTF+ +L AC+H G
Sbjct: 562 KVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAG 621
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
L EG + F MI Y I + EH+SC+VDL++R G + A ++I M + ++W +
Sbjct: 622 LVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTL 681
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
L AC ++ N LG+LAA L ++P +V YV+LSNI+ AG W+ RKLM+ER ++
Sbjct: 682 LAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVK 741
Query: 570 KNPGYSFLQ 578
K G S+++
Sbjct: 742 KEAGCSWIE 750
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 153/548 (27%), Positives = 271/548 (49%), Gaps = 28/548 (5%)
Query: 28 LDPSTYMSLLQFC---IDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
+D T L+ C D+ RQ +H + +G+ ++ + T ++ Y K D
Sbjct: 102 VDGLTLSCALKVCGVLFDQVVGRQ---VHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDG 158
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
R FD M +NVVSWT+++SGYA+NG ++ + + + M GV N FT+++ L A A
Sbjct: 159 RGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADE 218
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
++GG + I K F FV +AL+ +Y K + DA +F+ + +D V+WN MI
Sbjct: 219 SIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMI 278
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
GG A GF + F +F M G+K + L+ EL Q+H ++K G E
Sbjct: 279 GGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYE 338
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT--DIISCTALISGFARDDNHSKEAFDLF 322
+ + +L+ Y+K S+ A++L+ SM ++++ TA+I GF +++N +K+A DLF
Sbjct: 339 FAQDIRTALMVTYSKCSSVDEAFKLF-SMADAAHNVVTWTAMIGGFVQNNN-NKKAVDLF 396
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
M + G+ + +SL Q+HA K +V AL+D Y K+
Sbjct: 397 CQM--SREGVRPNHFTYSTVLAGKPSSLL--SQLHAQIIKAYYEKVPSVATALLDAYVKT 452
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
G + ++ R F + K++++W++++ G A+ +A+E++ ++ EG+ PN+ TF S++
Sbjct: 453 GNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVI 512
Query: 443 FACSHTGLTCE-GWELFTDMIN--KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
ACS + T E G ++ + K L + S ++ +++++G +ESA + +
Sbjct: 513 NACSSSAATVEHGKQIHATAVKSGKSNALCVS---SALLTMYSKKGNIESAEKVFTRQEE 569
Query: 500 KPTASLWSAILGACSIYGNTSLGELAARNLFDME----PEKSVNYVVLSNIYTAAGAWDN 555
+ S S I G YG + A M+ P V ++ + T AG +
Sbjct: 570 RDIVSWNSMITG----YGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEE 625
Query: 556 ARKTRKLM 563
K +M
Sbjct: 626 GEKYFNIM 633
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 112/430 (26%), Positives = 214/430 (49%), Gaps = 12/430 (2%)
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
A + FD P +++ + ++ +++N +D AL +F + SG+ + T S AL+ C
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
+ GR + K F+E++ V ++L+D+Y K ED +F+ + K+VVSW ++
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGL 263
+ G A G ND+ L M +G+ P+ FT ++L A + Q+H +I+K G
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
E + + +LI +Y K + A ++ SM+ D ++ +I G+A + E F +F
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFY-LEGFQMFH 295
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
M L + + + C L +C+ LN +Q+H K + + AL+ Y+K
Sbjct: 296 RMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCS 355
Query: 384 EIADANRAFDEMGD--KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
+ +A + F M D NV++WT++I G+ ++ +A++L+ +M EG+ PN T+ ++
Sbjct: 356 SVDEAFKLFS-MADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTV 414
Query: 442 LFACSHTGLTCEGWELFTDMINK-YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIK 500
L + L+ +L +I Y +P + ++D + + G + + + + K
Sbjct: 415 LAGKPSSLLS----QLHAQIIKAYYEKVPSVA--TALLDAYVKTGNVVESARVFYSIPAK 468
Query: 501 PTASLWSAIL 510
+ WSA+L
Sbjct: 469 DIVA-WSAML 477
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 95/161 (59%), Gaps = 1/161 (0%)
Query: 284 RSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNI 343
R A+QL+ DI L+ F+R+ NH +EA LFKD+ +G+D + L L +
Sbjct: 55 RYAHQLFDETPLKDISHYNRLLFDFSRN-NHDREALHLFKDLHSSGLGVDGLTLSCALKV 113
Query: 344 CANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISW 403
C + +GRQ+H + K D +VG +L+DMY K+ + D FDEMG KNV+SW
Sbjct: 114 CGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSW 173
Query: 404 TSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
TSL++GYA++G E I L +M+ EG+ PN TF ++L A
Sbjct: 174 TSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGA 214
>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 184/577 (31%), Positives = 321/577 (55%), Gaps = 18/577 (3%)
Query: 3 IVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
I+R G ++A+ F + C D T+ +++ C + A +H +I G
Sbjct: 95 IIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIG 154
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
++ ++++ +I Y K+G + A K FD MP R++VSW +M+SGY +G ++L+ F
Sbjct: 155 FDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFK 214
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
MLR G +A++F SAL AC+ L+ G I + + ++ V+++L+D+Y KCG
Sbjct: 215 EMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCG 274
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
++ A +F RI K++V+WNAMIGG+ DD + PD T+ ++L
Sbjct: 275 KVDYAERVFNRIYSKNIVAWNAMIGGMQ----EDDK-----------VIPDVITMINLLP 319
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
+ L++ IH I+ L +L+D+Y K G ++ A ++ M + +++S
Sbjct: 320 SCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVS 379
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
+++ + +++ + KEA +F+ ++ + + D + + +L A +AS + G+QIH++
Sbjct: 380 WNTMVAAYVQNEQY-KEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYI 438
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
K + + NA++ MYAK G++ A FD M K+V+SW ++I YA HG+G +I
Sbjct: 439 MKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSI 498
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDL 480
+ + +M+ +G PN TF+SLL ACS +GL EGW F M +Y I P EH+ C++DL
Sbjct: 499 QFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDL 558
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNY 540
R G L+ A I +M + PTA +W ++L A + + L ELAAR++ ++ + + Y
Sbjct: 559 LGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASRNHNDVVLAELAARHILSLKHDNTGCY 618
Query: 541 VVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
V+LSN+Y AG W++ + + LM+E+ L K G S +
Sbjct: 619 VLLSNMYAEAGRWEDVDRIKYLMKEQGLVKTVGCSMV 655
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/449 (27%), Positives = 228/449 (50%), Gaps = 18/449 (4%)
Query: 69 TKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR 128
T+ + + + G + +A F++M + W +I GY NG + A+ + M G+R
Sbjct: 62 TRDLCGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIR 121
Query: 129 ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWIL 188
++ FT+ ++AC + L G+ + G + K F +++V + L+D+Y K G+IE A +
Sbjct: 122 SDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKV 181
Query: 189 FERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIEL 248
F+ + +D+VSWN+M+ G + G S F+ M+R G K D F + S L A L
Sbjct: 182 FDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCL 241
Query: 249 MKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGF 308
+IH +I+ LE + SLID+Y K G + A +++ + +I++ A+I G
Sbjct: 242 RSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGM 301
Query: 309 ARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYD 368
DD K+ D + + +L C+ +L G+ IH FA +
Sbjct: 302 QEDD----------------KVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPY 345
Query: 369 AAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKH 428
+ AL+DMY K GE+ A F++M +KN++SW +++A Y ++ EA+++++ + +
Sbjct: 346 LVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILN 405
Query: 429 EGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLE 488
E + P+ +T S+L A + EG ++ + I K + + +V ++A+ G L+
Sbjct: 406 EPLKPDAITIASVLPAVAELASRSEGKQIHS-YIMKLGLGSNTFISNAIVYMYAKCGDLQ 464
Query: 489 SAYNMIRQMNIKPTASLWSAILGACSIYG 517
+A M K S W+ ++ A +I+G
Sbjct: 465 TAREFFDGMVCKDVVS-WNTMIMAYAIHG 492
>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 998
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 199/578 (34%), Positives = 310/578 (53%), Gaps = 4/578 (0%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITNG 60
I+ K G+ + +LK + + P Y+ S+L C+ K IH +++ +G
Sbjct: 213 IIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSG 272
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
++ + I FY K V RK FDRM ++NVVSWT +I+G QN + +AL +F
Sbjct: 273 IVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFV 332
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M R G + F +S L +C + L+ GR + K + FVK+ L+D+YAKC
Sbjct: 333 EMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCD 392
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+ DA +F + D+VS+NAMI G + Q ++ LFR M P S+L
Sbjct: 393 SLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLG 452
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
S L +QIH LIIK G+ +LIDVY+K + A ++ + DI+
Sbjct: 453 VSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVV 512
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
TA+ SG+ + + ++E+ L+K + + ++ ++ ++ +N+ASL G+Q H
Sbjct: 513 WTAMFSGYTQQ-SENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQV 571
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
K D V N L+DMYAKSG I +A++AF K+ W S+IA YA+HG +A+
Sbjct: 572 IKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAEKAL 631
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDL 480
++++ M EG+ PN VTF+ +L ACSHTGL G++ F D ++++ I P EH+ C+V L
Sbjct: 632 QVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHF-DSMSQFGIEPGIEHYVCMVSL 690
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNY 540
R G+L A I +M IK A +W ++L AC + GN LG AA P S +Y
Sbjct: 691 LGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSACRVSGNVELGTYAAEMAISCNPADSGSY 750
Query: 541 VVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
V+LSNI+ + G W N R+ R+ M+ + K PG S+++
Sbjct: 751 VLLSNIFASKGMWVNVRRLREKMDISGVVKEPGCSWIE 788
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 159/536 (29%), Positives = 278/536 (51%), Gaps = 12/536 (2%)
Query: 17 LKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIF 74
++F SC + P+ Y+ S+++ C A IH ++ GY ++++ T +I F
Sbjct: 129 VQFMRSCNEK---PNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDF 185
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
Y K + AR FD + + +WT +I+GY++ G + +L +F M V +++
Sbjct: 186 YTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVL 245
Query: 135 SSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER 194
SS L AC +++L+GG+ I + + V ++ + + +D Y KC ++ LF+R+
Sbjct: 246 SSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVD 305
Query: 195 KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQI 254
K+VVSW +I G F+ D+ LF M R G PD F S+L + + L K Q+
Sbjct: 306 KNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQV 365
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH 314
H IK+ +++ + + LID+YAK S+ A +++ M D++S A+I G++R D
Sbjct: 366 HAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKL 425
Query: 315 SKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNA 374
EA DLF++M L +I +L + A++ L L QIH KY S D G+A
Sbjct: 426 C-EALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSA 484
Query: 375 LIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
LID+Y+K + DA F+E+ DK+++ WT++ +GY + E+++LYK ++ + PN
Sbjct: 485 LIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPN 544
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI 494
+ TF +++ A S+ G + F + + K + +VD++A+ G +E A+
Sbjct: 545 EFTFAAVITAASNIASLRHGQQ-FHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAF 603
Query: 495 RQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEK-SVNYVVLSNIYTA 549
N K TA W++++ + +G E A + DM E NYV + +A
Sbjct: 604 ISTNWKDTAC-WNSMIATYAQHGE---AEKALQVFEDMIMEGLKPNYVTFVGVLSA 655
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 220/395 (55%), Gaps = 7/395 (1%)
Query: 52 IHAHIITNGY-ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
IH+ I+ G+ + ++ L ++ Y+K+ V A K FD M +N+V+W++M+S Y +
Sbjct: 60 IHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHS 119
Query: 111 YDENALLVFSAMLRS-GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK 169
+ AL++F +RS + N++ +S +RAC + L I G + KG +V++++V
Sbjct: 120 HCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVC 179
Query: 170 SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
++L+D Y K I+DA +LF+ ++ K +W +I G + QG + S LF M +
Sbjct: 180 TSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVC 239
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
PD + L S+L A + L QIH +++ G+ + ID Y K ++ +L
Sbjct: 240 PDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKL 299
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGID-DVILCL-MLNICANV 347
+ M+ +++S T +I+G ++ H ++A DLF +M +MG + D C +LN C ++
Sbjct: 300 FDRMVDKNVVSWTTVIAGCMQNSFH-RDALDLFVEM--ARMGWNPDAFGCTSVLNSCGSL 356
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI 407
+L GRQ+HA+A K D V N LIDMYAK + DA + F+ M +++S+ ++I
Sbjct: 357 VALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMI 416
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
GY++ EA++L+++M+ P + F+SLL
Sbjct: 417 EGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLL 451
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 187/555 (33%), Positives = 307/555 (55%), Gaps = 2/555 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T +LL + ++ + +H H++ GY+S L + ++ Y K + A F
Sbjct: 138 DHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLF 197
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
M E++ V++ A+++GY++ G++ +A+ +F M G R ++FT+++ L A +M ++
Sbjct: 198 KHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIE 257
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ + + K FV N+FV +ALLD Y+K I +A LF + D +S+N +I A
Sbjct: 258 FGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCA 317
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G ++S LFR + F ++L + + L QIH I S
Sbjct: 318 WNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVL 377
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ SL+D+YAK A +++ + + TALISG+ + H ++ LF +M
Sbjct: 378 VGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLH-EDGLKLFVEMHRA 436
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
K+G D +L CAN+ASL LG+Q+H+ + + G+AL+DMYAK G I +A
Sbjct: 437 KIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEA 496
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ F EM +N +SW +LI+ YA++G G A+ +++M H G+ PN V+FLS+L ACSH
Sbjct: 497 LQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHC 556
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
GL EG + F M Y++ PR EH++ +VD+ R G+ + A ++ +M +P +WS+
Sbjct: 557 GLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSS 616
Query: 509 ILGACSIYGNTSLGELAARNLFDMEP-EKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
IL +C I+ N L AA LF+M+ + YV +SNIY AAG WD+ K +K + ER
Sbjct: 617 ILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERG 676
Query: 568 LRKNPGYSFLQSSKK 582
+RK P YS+++ +K
Sbjct: 677 IRKVPAYSWVEIKQK 691
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 138/467 (29%), Positives = 246/467 (52%), Gaps = 7/467 (1%)
Query: 67 LSTKVIIF-YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
+ST +I Y K G++ +AR FD M +R+VV+WT +I GYAQ+ A +F+ M R
Sbjct: 74 ISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRH 133
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
G+ + T ++ L + + G + K + L V ++LLD Y K + A
Sbjct: 134 GMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLA 193
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGG 245
LF+ + KD V++NA++ G + +GFN D+ LF M G +P FT ++L A +
Sbjct: 194 CHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQM 253
Query: 246 IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALI 305
++ Q+H ++K + + +L+D Y+K+ I A +L+ M + D IS LI
Sbjct: 254 DDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLI 313
Query: 306 SGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS 365
+ A + +E+ +LF+++ + +L+I AN +L +GRQIH+ A +
Sbjct: 314 TCCAW-NGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDA 372
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKK 425
+ VGN+L+DMYAK + +ANR F ++ ++ + WT+LI+GY + G + ++L+ +
Sbjct: 373 ISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVE 432
Query: 426 MKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRG 485
M + + T+ S+L AC++ G +L + +I + L S +VD++A+ G
Sbjct: 433 MHRAKIGADSATYASILRACANLASLTLGKQLHSRII-RSGCLSNVFSGSALVDMYAKCG 491
Query: 486 QLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDM 532
++ A M ++M ++ + S W+A++ A Y G A R+ M
Sbjct: 492 SIKEALQMFQEMPVRNSVS-WNALISA---YAQNGDGGHALRSFEQM 534
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 188/394 (47%), Gaps = 36/394 (9%)
Query: 164 ENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM 223
+N+ + ++ Y K G + A LF+ + ++ VV+W +IGG A ++F LF M
Sbjct: 71 KNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADM 130
Query: 224 MRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
R GM PD TL ++L + +++Q+H ++K+G +S+ + SL+D Y K S+
Sbjct: 131 CRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSL 190
Query: 284 RSAYQLYRSMLKTDIISCTALISGFARDD-NHSKEAFDLFKDMILKKMGIDDVILCLMLN 342
A L++ M + D ++ AL++G++++ NH +A +LF M + +L
Sbjct: 191 GLACHLFKHMAEKDNVTFNALLTGYSKEGFNH--DAINLFFKMQDLGFRPSEFTFAAVLT 248
Query: 343 ICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVIS 402
+ + G+Q+H+F K ++ V NAL+D Y+K I +A + F EM + + IS
Sbjct: 249 AGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGIS 308
Query: 403 WTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT-----GLTCEGWEL 457
+ LI A +G E++EL+++++ F +LL +++ G +
Sbjct: 309 YNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAI 368
Query: 458 FTDMINKY--------------------RILPRAEHFSCV-----VDLFARRGQLESAYN 492
TD I++ RI H S V + + ++G E
Sbjct: 369 VTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLK 428
Query: 493 MIRQMN---IKPTASLWSAILGACSIYGNTSLGE 523
+ +M+ I ++ +++IL AC+ + +LG+
Sbjct: 429 LFVEMHRAKIGADSATYASILRACANLASLTLGK 462
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 42/101 (41%), Gaps = 31/101 (30%)
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVIS------------------------------ 402
N + + + G++ A + FDEM KNVIS
Sbjct: 46 NFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVV 105
Query: 403 -WTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
WT LI GYA+H EA L+ M GMVP+ +T +LL
Sbjct: 106 TWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLL 146
>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
Length = 924
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 193/576 (33%), Positives = 312/576 (54%), Gaps = 30/576 (5%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
S Y S+L+ C R +HAH + + + + + T + YAK ++ A++ FD
Sbjct: 283 SIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDM 342
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
N+ S+ AMI+GY+Q ALL+F + +S + ++ + S ALRACA ++ L G
Sbjct: 343 SENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEG 402
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ G K F N+ V +A +D+Y KC +++A +F+ + RKD VSWNA+I
Sbjct: 403 LQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQN 462
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
+ + SM+R GM+PD +T GS+L+A G L +IH I+KLG+ S+ +
Sbjct: 463 EERSKTLNILVSMLRSGMEPDEYTFGSVLKACAGD-SLNHGMEIHTTIVKLGMASNPYIG 521
Query: 271 GSLIDVYAKYGSIRSAYQLYRSM---------------------------LKTDIISCTA 303
SL+D+Y+K G I A +++ + ++ I+S A
Sbjct: 522 SSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNA 581
Query: 304 LISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY 363
+ISG+ S++A F M+ + D +L+ CAN+AS+ LG+QIHA K
Sbjct: 582 IISGYVMR-KQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKK 640
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELY 423
+ YD + + L+DMY+K G + D+ F++ ++ ++W ++I GYA HG G EAI+L+
Sbjct: 641 ELQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVTWNAMICGYAHHGMGEEAIKLF 700
Query: 424 KKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFAR 483
+ M ++PN TF+SLL AC+H GL G + F M +Y + PR EH+S +VD+ +
Sbjct: 701 ESMVLMNIMPNHATFVSLLRACAHMGLVERGLDYFHMMKKEYGLDPRLEHYSNMVDILGK 760
Query: 484 RGQLESAYNMIRQMNIKPTASLWSAILGACSI-YGNTSLGELAARNLFDMEPEKSVNYVV 542
G++E A +I++M + +W +L AC I N E+AA L ++P+ S Y++
Sbjct: 761 SGEVEKALELIQEMPFEADDVIWRTLLSACKINRNNVEAAEVAANALLRLDPQDSSTYIL 820
Query: 543 LSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
LSNIY AG WD A + R M L+K PG S+++
Sbjct: 821 LSNIYADAGMWDKASELRTAMRSDKLKKEPGCSWVE 856
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 142/496 (28%), Positives = 250/496 (50%), Gaps = 38/496 (7%)
Query: 30 PSTYMSLLQFCIDKKAERQAHLI----HAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
P+T ++ F + A+++AH + HAH+I +G+ + +S ++ Y G++ A
Sbjct: 45 PATSVANFSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYAT 104
Query: 86 KAFDRMPERNVVSWTAMISGYA-------------------------------QNGYDEN 114
K FD MP R+VVSW AMI GYA Q G +
Sbjct: 105 KLFDGMPLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLE 164
Query: 115 ALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLD 174
++ VF M RSGV + ++S L+ C+ + + G I G + + ++ SALLD
Sbjct: 165 SVKVFIEMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLD 224
Query: 175 LYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFT 234
+YAKC +++++ +F + +K+ +SW+A+I G F D +F+ M + G+
Sbjct: 225 MYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSI 284
Query: 235 LGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML 294
S+L++ +L +Q+H +K + + +D+YAK +++ A +L+
Sbjct: 285 YASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSE 344
Query: 295 KTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGR 354
++ S A+I+G+++ DN + A LF+ + +G D++ L L CA V L+ G
Sbjct: 345 NLNLQSYNAMITGYSQKDNGFR-ALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGL 403
Query: 355 QIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG 414
Q+H A K S + V NA IDMY K + +A R FDEMG K+ +SW ++IA + ++
Sbjct: 404 QLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNE 463
Query: 415 YGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF 474
+ + + M GM P++ TF S+L AC+ L G E+ T ++ K +
Sbjct: 464 ERSKTLNILVSMLRSGMEPDEYTFGSVLKACAGDSLN-HGMEIHTTIV-KLGMASNPYIG 521
Query: 475 SCVVDLFARRGQLESA 490
S +VD++++ G ++ A
Sbjct: 522 SSLVDMYSKCGMIDEA 537
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 139/531 (26%), Positives = 259/531 (48%), Gaps = 35/531 (6%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
D ++ +L+ C + + IH + GY++++ + ++ YAK + +
Sbjct: 179 FDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTV 238
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F MP++N +SW+A+I+G QN + + L +F M + GV +Q Y+S L++CA + L
Sbjct: 239 FYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPDL 298
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G + K FV++ V++A LD+YAKC ++DA LF+ E ++ S+NAMI G
Sbjct: 299 RLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGY 358
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
+ + + LFR + + + D +L LRA L + Q+H L K +
Sbjct: 359 SQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSRNI 418
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ + ID+Y K ++ A +++ M + D +S A+I+ +++ SK ++ M+
Sbjct: 419 CVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSK-TLNILVSMLR 477
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
M D+ +L CA SLN G +IH K + + +G++L+DMY+K G I +
Sbjct: 478 SGMEPDEYTFGSVLKACAG-DSLNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDE 536
Query: 388 A----NRAFDEMGDKN-----------------------VISWTSLIAGYAKHGYGHEAI 420
A N+ F +GD N ++SW ++I+GY +A
Sbjct: 537 AEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDAQ 596
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDL 480
+ +M G+ P+ T+ ++L C++ G ++ +I K + S +VD+
Sbjct: 597 RFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKK-ELQYDVYICSTLVDM 655
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
+++ G L + M + I+ + W+A++ C Y + +GE A + LF+
Sbjct: 656 YSKCGNLHDSRLMFEKAPIRDFVT-WNAMI--CG-YAHHGMGEEAIK-LFE 701
>gi|357461615|ref|XP_003601089.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490137|gb|AES71340.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 745
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 179/500 (35%), Positives = 282/500 (56%), Gaps = 7/500 (1%)
Query: 71 VIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
+I+ YAK G + A K FD+MPE ++VSW ++I+G N AL S M G++ +
Sbjct: 177 LILGYAKQGLIDDAMKLFDKMPEPDIVSWNSIIAGLVDNA-SSRALRFVSMMHGKGLKMD 235
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE 190
+FT+ S L+AC L GR I I K F + + SAL+D+Y+ C + +A +F+
Sbjct: 236 EFTFPSVLKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFD 295
Query: 191 RIERKDVVS-----WNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGG 245
+ R VS WN+M+ G + G ++ + M R G++ D +T +L+ +
Sbjct: 296 QYFRNSSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNF 355
Query: 246 IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALI 305
L SQ+H +I G E + LID+YAK GSI +A +L+ + D+++ ++LI
Sbjct: 356 DNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLI 415
Query: 306 SGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS 365
+G AR + K AF LF DMI + ID ++ ++L C+++AS G+Q+H+ K
Sbjct: 416 TGCARFGS-DKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGY 474
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKK 425
+ V ALIDMYAK G+I DA F + + + +SWTS+I G A++G EAI L K
Sbjct: 475 ESEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHK 534
Query: 426 MKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRG 485
M G PN +T L +L AC H+GL E W++F + + ++P EH++C+VD+ + G
Sbjct: 535 MIESGTKPNKITILGVLTACRHSGLVEEAWDVFNSIETNHGLIPCPEHYNCMVDILGQAG 594
Query: 486 QLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSN 545
+ E A +I +M KP ++WS++LGAC Y N L + A +L PE Y++LSN
Sbjct: 595 RFEEAVKLISEMPFKPDKTIWSSLLGACGTYKNRDLANIVAEHLLATSPEDVSVYIMLSN 654
Query: 546 IYTAAGAWDNARKTRKLMEE 565
+Y A G WD+ K R+ +++
Sbjct: 655 VYAALGMWDSVSKVRETVKK 674
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 157/518 (30%), Positives = 263/518 (50%), Gaps = 41/518 (7%)
Query: 37 LQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNV 96
++CI ++ + A +H+HII +G+ +++ + +I Y+K ++ AR FD MP RN+
Sbjct: 10 FRYCIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNI 69
Query: 97 VSWTAMISGYAQNGYDENALLVFSAMLRSGV-RANQFTYSSALRACARMRWLQGGRMIQG 155
VSWT M+S + AL +++ M+ S + + NQF YS+ L+AC +R ++ G+M+
Sbjct: 70 VSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHY 129
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD 215
I + + ++ + +ALLD+Y KCG + DA +F I K+ SWN +I G A QG DD
Sbjct: 130 HIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDD 189
Query: 216 SFWLFR-----------------------------SMMR-QGMKPDCFTLGSILRASVGG 245
+ LF SMM +G+K D FT S+L+A
Sbjct: 190 AMKLFDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKACGCS 249
Query: 246 IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCT--- 302
ELM +IH IIK G ESS +LID+Y+ + A +++ + +S +
Sbjct: 250 DELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLAL 309
Query: 303 --ALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
+++SG + ++ EA + M + D ++L IC N +L+L Q+H F
Sbjct: 310 WNSMLSGHVVNGDYV-EALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFV 368
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
D VG+ LID+YAK G I +A R F+ + DK+V++W+SLI G A+ G A
Sbjct: 369 ITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKLAF 428
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK-YRILPRAEHFSCVVD 479
L+ M H G+ + +L ACS G ++ + + K Y + ++D
Sbjct: 429 SLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYE--SEGVVTTALID 486
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
++A+ G +E A ++ ++ T S W++I+ C+ G
Sbjct: 487 MYAKCGDIEDALSLFGCLSEIDTMS-WTSIIVGCAQNG 523
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 193/395 (48%), Gaps = 20/395 (5%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D T+ S+L+ C IH +II +G+ES+ + + +I Y+ + A K
Sbjct: 234 MDEFTFPSVLKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKI 293
Query: 88 FDRMPERNVVS-----WTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA 142
FD+ + VS W +M+SG+ NG AL + S M RSGVR + +T+S L+ C
Sbjct: 294 FDQYFRNSSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICM 353
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
L + G + + + V S L+D+YAK G I +A LFER+ KDVV+W++
Sbjct: 354 NFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSS 413
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
+I G A G + +F LF M+ G++ D F + +L+A Q+H L +K G
Sbjct: 414 LITGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKG 473
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
ES +T +LID+YAK G I A L+ + + D +S T++I G A+ + ++EA L
Sbjct: 474 YESEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQ-NGRAEEAISLL 532
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG-----NALID 377
MI + + + +L C + + + F + + N ++D
Sbjct: 533 HKMIESGTKPNKITILGVLTACRHSGLVEEAWDV----FNSIETNHGLIPCPEHYNCMVD 588
Query: 378 MYAKSGEIADANRAFDEM---GDKNVISWTSLIAG 409
+ ++G +A + EM DK + W+SL+
Sbjct: 589 ILGQAGRFEEAVKLISEMPFKPDKTI--WSSLLGA 621
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 190/409 (46%), Gaps = 26/409 (6%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
D T+ +L+ C++ A +H +IT+GYE + + + +I YAK G + +A +
Sbjct: 340 FDFYTFSIVLKICMNFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRL 399
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F+R+P+++VV+W+++I+G A+ G D+ A +F M+ G++ + F S L+AC+ +
Sbjct: 400 FERLPDKDVVAWSSLITGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASH 459
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
Q G+ + K + V +AL+D+YAKCG IEDA LF + D +SW ++I G
Sbjct: 460 QHGKQVHSLCLKKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGC 519
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV-GGIELMKISQIHDLIIKLGLESS 266
A G +++ L M+ G KP+ T+ +L A G+ + + GL
Sbjct: 520 AQNGRAEEAISLLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVFNSIETNHGLIPC 579
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ ++D+ + G A +L M K D ++L+ N ++ ++ +
Sbjct: 580 PEHYNCMVDILGQAGRFEEAVKLISEMPFKPDKTIWSSLLGACGTYKN--RDLANIVAEH 637
Query: 326 ILKKMGIDDVILCLMLNICA----------------NVASLNLGRQIHAFAFKYQSSYDA 369
+L D + ++ N+ A + G+ + FK+
Sbjct: 638 LLATSPEDVSVYIMLSNVYAALGMWDSVSKVRETVKKIGKKRAGKIFYEIPFKFYFMEHL 697
Query: 370 AVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHE 418
+G +AK G + + + +++SW ++IAG A + +E
Sbjct: 698 HLG------HAKQGLNGGVVKVIYPILEPDLVSWNNVIAGLADNASPYE 740
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 194/436 (44%), Gaps = 67/436 (15%)
Query: 137 ALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKD 196
A R C R R ++ + + I K F ++F+ + ++ +Y+KC I DA +F+ + ++
Sbjct: 9 AFRYCIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRN 68
Query: 197 VVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGM-KPDCFTLGSILRAS--VGGIELMKISQ 253
+VSW M+ L ++ L+ M+ + +P+ F ++L+A V +EL K+
Sbjct: 69 IVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVH 128
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSA--------------------------- 286
H I + L+ L +L+D+Y K GS+R A
Sbjct: 129 YH--IFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGL 186
Query: 287 ----YQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLN 342
+L+ M + DI+S ++I+G DN S A M K + +D+ +L
Sbjct: 187 IDDAMKLFDKMPEPDIVSWNSIIAGLV--DNASSRALRFVSMMHGKGLKMDEFTFPSVLK 244
Query: 343 ICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVIS 402
C L LGR+IH + K +ALIDMY+ +++A + FD+ + +S
Sbjct: 245 ACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVS 304
Query: 403 -----WTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC-----------S 446
W S+++G+ +G EA+ + M G+ + TF +L C
Sbjct: 305 ESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQV 364
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
H + G+EL D + S ++D++A++G + +A + ++ K + W
Sbjct: 365 HGFVITSGYEL--DCVVG----------SILIDIYAKQGSINNALRLFERLPDKDVVA-W 411
Query: 507 SAILGACSIYGNTSLG 522
S+++ C+ +G+ L
Sbjct: 412 SSLITGCARFGSDKLA 427
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 19/218 (8%)
Query: 344 CANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISW 403
C S+ + +H+ K + N +I +Y+K I DA FDEM +N++SW
Sbjct: 13 CIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVSW 72
Query: 404 TSLIAGYAKHGYGHEAIELYKKMKHEGM-VPNDVTFLSLLFACSHTGLTCEG----WELF 458
T++++ HEA+ LY +M + PN + ++L AC G + +F
Sbjct: 73 TTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYHIF 132
Query: 459 TDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
++ +L A ++D++ + G L A + ++ K S + ILG Y
Sbjct: 133 QAKLDVDIVLMNA-----LLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILG----YAK 183
Query: 519 TSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNA 556
L + A + LFD PE ++S AG DNA
Sbjct: 184 QGLIDDAMK-LFDKMPEPD----IVSWNSIIAGLVDNA 216
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 178/527 (33%), Positives = 296/527 (56%), Gaps = 1/527 (0%)
Query: 51 LIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
L+H + +G ++ +S+ +I Y KVG + + F++M RNVVSWTA+I+G G
Sbjct: 145 LLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAG 204
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
Y+ LL FS M RS V + T++ AL+A A L G+ I K F E+ FV +
Sbjct: 205 YNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVIN 264
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
L +Y KCG + LFE++ DVVSW +I G + + F+ M + + P
Sbjct: 265 TLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSP 324
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
+ +T +++ + QIH +++LGL ++ + S+I +Y+K G ++SA ++
Sbjct: 325 NKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVF 384
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
+ + DIIS + +IS +++ ++KEAFD M + ++ L +L++C ++A L
Sbjct: 385 HGITRKDIISWSTIISVYSQG-GYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALL 443
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
G+Q+HA ++A V +A+I MY+K G + +A++ F+ M ++ISWT++I GY
Sbjct: 444 EQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGY 503
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
A+HGY EAI L++K+ G+ P+ V F+ +L AC+H G+ G+ F M N YRI P
Sbjct: 504 AEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVYRISPS 563
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
EH+ C++DL R G+L A ++IR M +WS +L AC ++G+ G A L
Sbjct: 564 KEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRVHGDVDRGRWTAEQLL 623
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
++P + ++ L+NIY A G W A RKLM+ + + K G+S++
Sbjct: 624 QLDPNSAGTHITLANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWV 670
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 153/523 (29%), Positives = 256/523 (48%), Gaps = 32/523 (6%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
L+Q I ++ A+ +H N E N L V K G + AR FD+M R+
Sbjct: 38 LIQQPIQEQPAENAYSVH-----NMLELNSELKQLV-----KQGQLCKARYMFDKMTHRD 87
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAM-LRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
+SWT +I+GY AL++FS M + G + +QF S AL+ACA + G ++
Sbjct: 88 EISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMISVALKACALGVNICFGELLH 147
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND 214
G K + ++FV SAL+D+Y K G IE +FE++ ++VVSW A+I GL G+N
Sbjct: 148 GFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNM 207
Query: 215 DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLI 274
+ F M R + D T L+AS L IH IK G + S+ + +L
Sbjct: 208 EGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLA 267
Query: 275 DVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR--DDNHSKEAFDLFKDMILKKMGI 332
+Y K G +L+ M D++S T LIS + + ++ H+ EA FK M +
Sbjct: 268 TMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEA---FKRMRKSYVSP 324
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAF 392
+ +++ CAN+A+ G QIH + +V N++I +Y+K G + A+ F
Sbjct: 325 NKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVF 384
Query: 393 DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTC 452
+ K++ISW+++I+ Y++ GY EA + M+ EG PN+ S+L C L
Sbjct: 385 HGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLE 444
Query: 453 EGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
+G ++ ++ I A S ++ ++++ G ++ A + M I S W+A++
Sbjct: 445 QGKQVHAHLLC-IGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIIS-WTAMING 502
Query: 513 CSIYGNTSLGELAARNLFD------MEPEKSVNYVVLSNIYTA 549
+ +G + A NLF+ ++P+ YV+ + TA
Sbjct: 503 YAEHGYSQ----EAINLFEKISSVGLKPD----YVMFIGVLTA 537
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 200/390 (51%), Gaps = 7/390 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ L+ D IH I G++ + + + Y K G + F
Sbjct: 224 DSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLF 283
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
++M +VVSWT +IS Y Q G +E+A+ F M +S V N++T+++ + +CA + +
Sbjct: 284 EKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAK 343
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G I G + + V L V ++++ LY+KCG ++ A ++F I RKD++SW+ +I +
Sbjct: 344 WGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYS 403
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G+ ++F M R+G KP+ F L S+L L + Q+H ++ +G++
Sbjct: 404 QGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAM 463
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ ++I +Y+K GS++ A +++ M DIIS TA+I+G+A + +S+EA +LF+ +
Sbjct: 464 VHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYA-EHGYSQEAINLFEKISSV 522
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFK---YQSSYDAAVGNALIDMYAKSGEI 385
+ D V+ +L C + ++LG + F Y+ S LID+ ++G +
Sbjct: 523 GLKPDYVMFIGVLTACNHAGMVDLG--FYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRL 580
Query: 386 ADANRAFDEMG-DKNVISWTSLIAGYAKHG 414
++A M + + W++L+ HG
Sbjct: 581 SEAEHIIRSMPFHTDDVVWSTLLRACRVHG 610
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 190/581 (32%), Positives = 310/581 (53%), Gaps = 40/581 (6%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIF--YAKVGDVLSARKAFDRMP 92
+L Q C K +Q IHA ++ + + ++++ ++ + ARK FD++P
Sbjct: 144 ALFQQCTSFKQLKQ---IHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIP 200
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLR-SGVRANQFTYSSALRACARMRWLQGGR 151
+ N+ SW +I A + ++LVF ML S N+FT+ ++A A R G+
Sbjct: 201 QPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGK 260
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE--RKDVVSWNAMIGGLAM 209
+ G K F +++FV ++L+ YA CG ++ A+++FE IE KD+VSWN+M+ G
Sbjct: 261 AVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQ 320
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
G+ D + LF M +G+ P+ T+ S++ A + L ++ D I + + + +
Sbjct: 321 GGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNV 380
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH--------------- 314
+ ID++ K G + A L+ +M K D++S T +I G+A+ H
Sbjct: 381 CNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDI 440
Query: 315 ---------------SKEAFDLFKDMILKKMGI--DDVILCLMLNICANVASLNLGRQIH 357
KEA +F+++ L K G D V L L+ CA + ++++G IH
Sbjct: 441 PAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIH 500
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
+ K + + + +LIDMY+KSG++ A F +G+K+V W+++IAG A HG G
Sbjct: 501 GYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGE 560
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
AIEL+ M+ + PN VTF +LL ACSH+GL EG LF +M Y ++P+ +H+SC+
Sbjct: 561 AAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCM 620
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKS 537
VD+ R G LE A I M + P+AS+W A+LGAC I+GN L E A L ++EP
Sbjct: 621 VDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNH 680
Query: 538 VNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
YV+LSN+Y G W+ + R+ M + L+K G S ++
Sbjct: 681 GAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIE 721
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/444 (25%), Positives = 200/444 (45%), Gaps = 46/444 (10%)
Query: 13 LKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLI----HAHIITNGYESNLHLS 68
++ L F D+ P+ + I AER+ L+ H I + ++ +
Sbjct: 221 IQSVLVFIRMLHDSPFGPNKFT--FPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVFVL 278
Query: 69 TKVIIFYAKVGDVLSARKAFDRMP--ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+I FYA G + A F+ + +++VSW +M++G+ Q GY + AL +F M G
Sbjct: 279 NSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEG 338
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
V N T S + ACA+ L GR + I + + NL V +A +D++ KCG +E A
Sbjct: 339 VHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIAR 398
Query: 187 ILFERIERKDVVS-------------------------------WNAMIGGLAMQGFNDD 215
LF+ +E++DVVS WN +I G G +
Sbjct: 399 GLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKE 458
Query: 216 SFWLFRSMM--RQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKLTGS 272
+ +FR + + G +PD TL S L A + M I + IH I K ++ + L S
Sbjct: 459 ALAIFRELQLTKSGARPDQVTLLSTLSA-CAQLGAMDIGEWIHGYIKKERIQLNRNLATS 517
Query: 273 LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI 332
LID+Y+K G + A +++ S+ D+ +A+I+G A + A +LF DM ++
Sbjct: 518 LIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAM-HGRGEAAIELFLDMQETQVKP 576
Query: 333 DDVILCLMLNICANVASLNLGRQI-HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
+ V +L C++ ++ G+++ Y + ++D+ ++G + +A +
Sbjct: 577 NSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKF 636
Query: 392 FDEMGDKNVIS-WTSLIAGYAKHG 414
+ M S W +L+ HG
Sbjct: 637 IEGMPLAPSASVWGALLGACCIHG 660
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 6/209 (2%)
Query: 9 KTGQLKQAL----KFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESN 64
++G+ K+AL + L+ D T +S L C A IH +I + N
Sbjct: 452 QSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLN 511
Query: 65 LHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLR 124
+L+T +I Y+K GDV A + F + ++V W+AMI+G A +G E A+ +F M
Sbjct: 512 RNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQE 571
Query: 125 SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGR-FVENLFVKSALLDLYAKCGWIE 183
+ V+ N T+++ L AC+ + G+ + +++ V S ++D+ + G +E
Sbjct: 572 TQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLE 631
Query: 184 DAWILFERIERKDVVS-WNAMIGGLAMQG 211
+A E + S W A++G + G
Sbjct: 632 EALKFIEGMPLAPSASVWGALLGACCIHG 660
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 189/576 (32%), Positives = 314/576 (54%), Gaps = 22/576 (3%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLS 68
KT K ++ P TL+ L+ C K R + IHAH+I ++ L L
Sbjct: 11 KTPTAKTSISLFPENPKTLI--------LEQC---KTIRDLNEIHAHLI----KTRLLLK 55
Query: 69 TKVIIFYAKVGDVL------SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAM 122
KV + +L A F ++ E + ++ MI G+ A+L+F M
Sbjct: 56 PKVAENLLESAAILLPTSMDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEM 115
Query: 123 LRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWI 182
+ V+ ++FT+ L+ C+R++ L G I I K F + FVK+ L+ +YA CG +
Sbjct: 116 HENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEV 175
Query: 183 EDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS 242
E A +F+ + ++V +WN+M G G ++ LF M+ ++ D TL S+L A
Sbjct: 176 EVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTAC 235
Query: 243 VGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCT 302
+L I+ + + GL+ + L SL+D+YAK G + +A +L+ M + D+++ +
Sbjct: 236 GRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWS 295
Query: 303 ALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK 362
A+ISG+++ + +EA DLF +M + +++ + +L+ CA + +L G+ +H F K
Sbjct: 296 AMISGYSQA-SRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKK 354
Query: 363 YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIEL 422
+ +G AL+D YAK G + + F +M KNV+SWT LI G A +G G +A+E
Sbjct: 355 KRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEY 414
Query: 423 YKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFA 482
+ M + + PNDVTF+ +L ACSH GL EG +LF M + I PR EH+ C+VD+
Sbjct: 415 FYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILG 474
Query: 483 RRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVV 542
R G +E A+ I+ M I+P A +W +L +C ++ N +GE + + L +EP S +Y++
Sbjct: 475 RAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYIL 534
Query: 543 LSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
LSNIY + G W++A K R M+E+ ++K PG S ++
Sbjct: 535 LSNIYASVGRWEDALKVRGEMKEKGIKKTPGCSLIE 570
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 189/580 (32%), Positives = 321/580 (55%), Gaps = 30/580 (5%)
Query: 17 LKFSLSC-----PDTLLDPSTYMSLLQFCIDKKAERQAH-------LIHAHIITNGYESN 64
L+ LSC PD T+ SL++ + Q H L+ + T+G
Sbjct: 56 LRHILSCAYPFRPDGF----TFPSLIRAAPSNASAAQLHACALRLGLVRPSVFTSG---- 107
Query: 65 LHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLR 124
++ Y + G + A K FD M ER+V +W AM+SG +N A+ +F M+
Sbjct: 108 -----SLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVG 162
Query: 125 SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIED 184
GV + T SS L C + ++ K + LFV +AL+D+Y K G +E+
Sbjct: 163 EGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEE 222
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG 244
A +F +E +D+V+WN++I G +G + +F+ M G+ PD TL S+ A
Sbjct: 223 AQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQ 282
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTG-SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTA 303
G + +H +++ G + + + G +++D+YAK +I +A +++ SM D +S
Sbjct: 283 GGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNT 342
Query: 304 LISGFARDDNHSKEAFDLFKDMILKKMGIDDV--ILCLMLNICANVASLNLGRQIHAFAF 361
LI+G+ ++ + EA + + M K G+ + +L +++ +L G ++HA +
Sbjct: 343 LITGYMQN-GLANEAVERYGHM-QKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSI 400
Query: 362 KYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIE 421
K + D VG LID+YAK G++A+A F++M ++ W ++I+G HG+G EA+
Sbjct: 401 KIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALT 460
Query: 422 LYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLF 481
L+ +M+ EG+ P+ VTF+SLL ACSH GL +G F M Y I+P A+H++C+ D+
Sbjct: 461 LFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADML 520
Query: 482 ARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYV 541
R GQL+ A+N I+ M IKP +++W A+LGAC I+GN +G++A++NLF+++PE YV
Sbjct: 521 GRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYV 580
Query: 542 VLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSK 581
++SN+Y G WD + R L+ ++L+K PG+S ++ +
Sbjct: 581 LMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKR 620
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 187/583 (32%), Positives = 319/583 (54%), Gaps = 4/583 (0%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPSTY--MSLLQFCIDKKAERQAHLIHAHIITN 59
+I+ A+ G +AL + + +TY ++ LQ D + IH ++ +
Sbjct: 218 SIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKS 277
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
+ ++++++ +I YAK G + A + F+ M R+ VSW ++SG QN +AL F
Sbjct: 278 NHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYF 337
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
M SG + +Q + + + A R L G+ + + N+ + + L+D+YAKC
Sbjct: 338 RDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKC 397
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
++ FE + KD++SW +I G A F+ ++ LFR + +GM D +GS+L
Sbjct: 398 CCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVL 457
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
RA G I +IH + K L + L ++++VY + G I A + + S+ DI+
Sbjct: 458 RACSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIV 516
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
S T++I+ + EA +LF + + D + + L+ AN++SL G++IH F
Sbjct: 517 SWTSMITCCVHN-GLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGF 575
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
+ + + ++L+DMYA G + ++ + F + +++I WTS+I HG G++A
Sbjct: 576 LIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKA 635
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD 479
I L+KKM + ++P+ +TFL+LL+ACSH+GL EG F M Y++ P EH++C+VD
Sbjct: 636 IALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVD 695
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVN 539
L +R LE AY+ +R M IKP++ +W A+LGAC I+ N LGELAA+ L + E S
Sbjct: 696 LLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELAAKELLQSDTENSGK 755
Query: 540 YVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
Y ++SNI+ A G W++ + R M+ L+KNPG S+++ K
Sbjct: 756 YALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNK 798
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 151/494 (30%), Positives = 269/494 (54%), Gaps = 10/494 (2%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D T+ S+L+ C R IH + GY + + +I Y K GD+ AR
Sbjct: 143 IDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVL 202
Query: 88 FD--RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
FD M + + VSW ++IS + G AL +F M GV +N +T+ +AL+
Sbjct: 203 FDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPS 262
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
+++ G I G++ K +++V +AL+ +YAKCG +EDA +FE + +D VSWN ++
Sbjct: 263 FVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLS 322
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
GL D+ FR M G KPD ++ +++ AS L+K ++H I+ GL+S
Sbjct: 323 GLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDS 382
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ ++ +L+D+YAK ++ + M + D+IS T +I+G+A+++ H EA +LF+ +
Sbjct: 383 NMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFH-LEAINLFRKV 441
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+K M +D +++ +L C+ + S N R+IH + FK + D + NA++++Y + G I
Sbjct: 442 QVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLA-DIMLQNAIVNVYGEVGHI 500
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A RAF+ + K+++SWTS+I +G EA+EL+ +K + P+ + +S L A
Sbjct: 501 DYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSAT 560
Query: 446 SHTGLTCEGWELFTDMINKYRIL--PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
++ +G E+ +I K L P A S +VD++A G +E++ M + +
Sbjct: 561 ANLSSLKKGKEIHGFLIRKGFFLEGPIA---SSLVDMYACCGTVENSRKMFHSVKQRDLI 617
Query: 504 SLWSAILGACSIYG 517
LW++++ A ++G
Sbjct: 618 -LWTSMINANGMHG 630
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 153/514 (29%), Positives = 264/514 (51%), Gaps = 21/514 (4%)
Query: 11 GQLKQALK-FSLSCPDTLLDPS----TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNL 65
G LK A + +L L PS + LL C+ KA Q +HA ++ + +
Sbjct: 22 GTLKPAFQSLTLLSTHPLATPSRLEHAHSLLLDLCVAAKALPQGQQLHALLLKSHLSA-- 79
Query: 66 HLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
L+TK+++ Y K G + A K FD M ER + SW A++ + +G A+ ++ M
Sbjct: 80 FLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVL 139
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
GV + T+ S L+AC + + G I G K + E +FV +AL+ +Y KCG + A
Sbjct: 140 GVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGA 199
Query: 186 WILFERI--ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV 243
+LF+ I E++D VSWN++I +G ++ LFR M G+ + +T + L+ V
Sbjct: 200 RVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQG-V 258
Query: 244 GGIELMKISQ-IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCT 302
+K+ IH ++K + + +LI +YAK G + A +++ SML D +S
Sbjct: 259 EDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWN 318
Query: 303 ALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK 362
L+SG +++ +S +A + F+DM D V + ++ +L G+++HA+A +
Sbjct: 319 TLLSGLVQNELYS-DALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIR 377
Query: 363 YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIEL 422
+ +GN L+DMYAK + AF+ M +K++ISWT++IAGYA++ + EAI L
Sbjct: 378 NGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINL 437
Query: 423 YKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY---RILPRAEHFSCVVD 479
++K++ +GM + + S+L ACS GL F I+ Y R L + +V+
Sbjct: 438 FRKVQVKGMDVDPMMIGSVLRACS--GLKSRN---FIREIHGYVFKRDLADIMLQNAIVN 492
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGAC 513
++ G ++ A + K S W++++ C
Sbjct: 493 VYGEVGHIDYARRAFESIRSKDIVS-WTSMITCC 525
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 191/563 (33%), Positives = 296/563 (52%), Gaps = 14/563 (2%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L D T L+Q K + +HA +I G N LS + Y+K G++ K
Sbjct: 72 LSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIK 131
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FD+M +RN+VSWT++I+G+A N + AL F M G A QF SS L+AC +
Sbjct: 132 LFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGA 191
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
+Q G + + K F LFV S L D+Y+KCG + DA FE + KD V W +MI G
Sbjct: 192 IQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDG 251
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ----IHDLIIKLG 262
G + + M+ D F +L +++ +K S +H I+KLG
Sbjct: 252 FVKNGDFKKALTAYMKMVTD----DVFIDQHVLCSTLSACSALKASSFGKSLHATILKLG 307
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD---IISCTALISGFARDDNHSKEAF 319
E + +L D+Y+K G + SA +++ + +D I+S TA+I G+ D K A
Sbjct: 308 FEYETFIGNALTDMYSKSGDMVSASNVFQ--IHSDCISIVSLTAIIDGYVEMDQIEK-AL 364
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMY 379
F D+ + + ++ ++ CAN A L G Q+H K+ D V + L+DMY
Sbjct: 365 STFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMY 424
Query: 380 AKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFL 439
K G + + FDE+ + + I+W +L+ +++HG G AIE + M H G+ PN VTF+
Sbjct: 425 GKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFV 484
Query: 440 SLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
+LL CSH G+ +G F+ M Y ++P+ EH+SCV+DL R G+L+ A + I M
Sbjct: 485 NLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPF 544
Query: 500 KPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKT 559
+P W + LGAC I+G+ + AA L +EPE S +V+LSNIY W++ +
Sbjct: 545 EPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSL 604
Query: 560 RKLMEERSLRKNPGYSFLQSSKK 582
RK++++ ++ K PGYS++ K
Sbjct: 605 RKMIKDGNMNKLPGYSWVDIRNK 627
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 140/289 (48%), Gaps = 4/289 (1%)
Query: 9 KTGQLKQALK--FSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K G K+AL + D +D S L C KA +HA I+ G+E
Sbjct: 254 KNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETF 313
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPE-RNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
+ + Y+K GD++SA F + ++VS TA+I GY + E AL F + R
Sbjct: 314 IGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRR 373
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
G+ N+FT++S ++ACA L+ G + G + K F + FV S L+D+Y KCG + +
Sbjct: 374 GIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHS 433
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVG 244
LF+ IE D ++WN ++G + G ++ F M+ +G+KP+ T ++L+ S
Sbjct: 434 IQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHA 493
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
G+ ++ + G+ + +ID+ + G ++ A +M
Sbjct: 494 GMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNM 542
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 202/648 (31%), Positives = 351/648 (54%), Gaps = 75/648 (11%)
Query: 3 IVRANFKTGQLKQALKFSLSC----PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIIT 58
+VRA+ + G+L +A+ +SC T D T L+ C + + R H I
Sbjct: 120 LVRAHIEEGRLDRAI--GVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICC 177
Query: 59 NGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER---NVVSWTAMISGYAQNGYDENA 115
NG+ESN+ + ++ Y++ G + A FD + + +V+SW ++++ + + A
Sbjct: 178 NGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTA 237
Query: 116 LLVFSAMLR------SGVRANQFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFV 168
L +FS M + R++ + + L ACA ++ L + I +I+ G F + FV
Sbjct: 238 LDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFAD-AFV 296
Query: 169 KSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM------------------------- 203
+AL+D YAKCG ++DA +F +E KDVVSWNAM
Sbjct: 297 CNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENI 356
Query: 204 ----------IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ 253
I G A +G+ ++ F+ M+ G +P+ T+ S+L A L + +
Sbjct: 357 PLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGME 416
Query: 254 IHDLIIKLGLESSNK------------LTGSLIDVYAKYGSIRSAYQLYRSMLKTD--II 299
H +K L S + + +LID+Y+K S ++A ++ S+ + + ++
Sbjct: 417 THAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVV 476
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD---VILCLMLNICANVASLNLGRQI 356
+ T +I G+A+ + S +A LF +MI K + I C+++ CA+++SL +G+QI
Sbjct: 477 TWTVMIGGYAQYGD-SNDALKLFSEMISKPYAVAPNAYTISCILM-ACAHLSSLRMGKQI 534
Query: 357 HAFAFKYQSSYDAAV---GNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKH 413
HA+ ++ Y+++V N LIDMY+K G++ A FD M +N +SWTS+++GY H
Sbjct: 535 HAYVTRHHE-YESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMH 593
Query: 414 GYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEH 473
G G EA++++ KM+ G VP+D++FL LL+ACSH+G+ +G + F M + Y ++ A+H
Sbjct: 594 GRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQH 653
Query: 474 FSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDME 533
++CV+DL AR G+L+ A+ I++M ++P+A++W A+L AC ++ N L E A L M+
Sbjct: 654 YACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMK 713
Query: 534 PEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSK 581
E +Y ++SNIY A W + + R+LM++ ++K PG S++Q K
Sbjct: 714 AENDGSYTLISNIYATARRWKDVARIRQLMKKSGIKKRPGCSWVQGKK 761
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 150/580 (25%), Positives = 267/580 (46%), Gaps = 88/580 (15%)
Query: 20 SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG------------------- 60
S C + P+ + SLL+ C RQ IH II G
Sbjct: 21 SAECTGRDVSPTHFASLLKECRSVNTVRQ---IHQKIIAYGLLSYPASLLSVSLPPLPSH 77
Query: 61 -YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
Y S L T V+ Y G A +R+ V W ++ + + G + A+ V
Sbjct: 78 SYVSPKSLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVS 137
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
MLR+G + + FT AL+AC + + G G I F N+FV +AL+ +Y++
Sbjct: 138 CRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRS 197
Query: 180 GWIEDAWILFERIERK---DVVSWNAMIGGLAMQGFNDDSFWLFRSMMR------QGMKP 230
G +EDA ++F+ I RK DV+SWN+++ + LF M +
Sbjct: 198 GSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERS 257
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIR------ 284
D ++ +IL A L + +IH I+ G + + +LID YAK GS++
Sbjct: 258 DIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVF 317
Query: 285 -------------------------SAYQLYRSMLKT----DIISCTALISGFARDDNHS 315
+A++L+++M K D+I+ +A+I+G+A+ +
Sbjct: 318 NVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQ-RGYG 376
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK------------Y 363
+EA D F+ MIL + V + +L+ CA++ +L+ G + HA++ K
Sbjct: 377 QEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGD 436
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMG--DKNVISWTSLIAGYAKHGYGHEAIE 421
D V NALIDMY+K A F+ + ++NV++WT +I GYA++G ++A++
Sbjct: 437 GDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALK 496
Query: 422 LYKKM--KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF--SCV 477
L+ +M K + PN T +L AC+H G ++ + ++ + +F +C+
Sbjct: 497 LFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHA-YVTRHHEYESSVYFVANCL 555
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
+D++++ G +++A N+ M + S W++++ ++G
Sbjct: 556 IDMYSKCGDVDTARNVFDSMPKRNEVS-WTSMMSGYGMHG 594
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 131/488 (26%), Positives = 213/488 (43%), Gaps = 97/488 (19%)
Query: 176 YAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTL 235
Y CG DA + ER+ V WN ++ +G D + + M+R G KPD FTL
Sbjct: 93 YLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTL 152
Query: 236 GSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLK 295
L+A S H LI G ES+ + +L+ +Y++ GS+ A ++ + +
Sbjct: 153 PYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITR 212
Query: 296 T---DIISCTALISGFARDDNHSKEAFDLFKDM--ILKKMGID---DVI-LCLMLNICAN 346
D+IS ++++ + N + A DLF +M I+ + + D+I + +L CA+
Sbjct: 213 KGIDDVISWNSIVAAHVKGSN-PRTALDLFSEMTTIVHEKATNERSDIISIVNILPACAS 271
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVIS---- 402
+ +L ++IH++A + + DA V NALID YAK G + DA F+ M K+V+S
Sbjct: 272 LKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAM 331
Query: 403 -------------------------------WTSLIAGYAKHGYGHEAIELYKKMKHEGM 431
W+++IAGYA+ GYG EA++ +++M G
Sbjct: 332 VTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGS 391
Query: 432 VPNDVTFLSLLFACSHTGLTCEGWEL------------------------------FTDM 461
PN VT +SLL AC+ G +G E DM
Sbjct: 392 EPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDM 451
Query: 462 INKYR----------ILPRAEH----FSCVVDLFARRGQLESAYNMIRQM-----NIKPT 502
+K R +PR E ++ ++ +A+ G A + +M + P
Sbjct: 452 YSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPN 511
Query: 503 ASLWSAILGACSIYGNTSLG-ELAARNLFDMEPEKSVNYVV--LSNIYTAAGAWDNARKT 559
A S IL AC+ + +G ++ A E E SV +V L ++Y+ G D AR
Sbjct: 512 AYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNV 571
Query: 560 RKLMEERS 567
M +R+
Sbjct: 572 FDSMPKRN 579
>gi|225433310|ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Vitis vinifera]
Length = 625
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 190/566 (33%), Positives = 318/566 (56%), Gaps = 12/566 (2%)
Query: 28 LDPS-TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
DPS + L F + K+ + H+ I++ G N L+TK+I YA +R
Sbjct: 20 FDPSLALLQSLHFSVTHKSLKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRL 79
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FD + +NV W ++I+GYA+N A +F+ M S V + FT S+ + + +
Sbjct: 80 VFDSLQHKNVFLWNSLINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGA 139
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
L G+ I G + FV + V ++++ +Y KCG E++ +F+ + ++ SWN +I G
Sbjct: 140 LFSGKSIHGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAG 199
Query: 207 LAMQG---FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS-QIHDLIIK-- 260
A+ G F ++++ + M ++PD +T+ S+L G ++H I+K
Sbjct: 200 YAVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVKNE 259
Query: 261 --LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEA 318
LGL+S L LID+Y++ + +++ M ++ S TA+I+G+ ++ S EA
Sbjct: 260 LVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYV-ENGDSDEA 318
Query: 319 FDLFKDM-ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
LF+DM ++ + + V L +L C++ + L GRQIH FA + + + + ++ NALID
Sbjct: 319 LSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALID 378
Query: 378 MYAKSGEIADANRAF-DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDV 436
MY+K G + A R F D+ K+ ISW+S+I+GY HG G EAI LY KM G+ P+ +
Sbjct: 379 MYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMI 438
Query: 437 TFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQ 496
T + +L ACS +GL EG +++ +IN Y I P E F+C+VD+ R GQL+ A + I+
Sbjct: 439 TTVGILSACSRSGLVNEGLNIYSSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKA 498
Query: 497 MNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNA 556
M ++P S+W A++ I+G+ + ELA R L +EPE NYV +SN+Y ++ WD
Sbjct: 499 MPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQLEPENPSNYVSISNLYASSRRWDAV 558
Query: 557 RKTRKLMEERSLRKNPGYSFLQSSKK 582
+ R++M+++ LRK PG S++ + K
Sbjct: 559 AEVRRMMKDKRLRKVPGCSWISINNK 584
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 205/437 (46%), Gaps = 18/437 (4%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
D L D T +L + + A IH I G+ S+ ++ ++ Y K G+ +
Sbjct: 119 DVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVSDTVVANSIMSMYCKCGNFEES 178
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNG---YDENALLVFSAMLRSGVRANQFTYSSALRAC 141
RK FD M RN SW +I+GYA +G + E M VR + +T SS L C
Sbjct: 179 RKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLPLC 238
Query: 142 --ARMRWLQGGRMIQGSIQKGRFV----ENLFVKSALLDLYAKCGWIEDAWILFERIERK 195
+ +W GR + I K V ++ + L+D+Y++ + +F+R++ +
Sbjct: 239 DGDKGKW-DYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCR 297
Query: 196 DVVSWNAMIGGLAMQGFNDDSFWLFRSM-MRQGMKPDCFTLGSILRASVGGIELMKISQI 254
+V SW AMI G G +D++ LFR M + G++P+ +L S+L A L+ QI
Sbjct: 298 NVFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQI 357
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR-SMLKTDIISCTALISGFARDDN 313
H ++ L + L +LID+Y+K GS+ SA +++ L D IS +++ISG+
Sbjct: 358 HGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGL-HG 416
Query: 314 HSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK-YQSSYDAAVG 372
+EA L+ M+ + D + +L+ C+ +N G I++ Y +
Sbjct: 417 KGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGLVNEGLNIYSSVINDYGIEPTLEIF 476
Query: 373 NALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHGYGHEAIELYKK--MKHE 429
++DM ++G++ A M + W +L++ HG E EL + ++ E
Sbjct: 477 ACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSCSIIHG-DLEMQELAYRFLIQLE 535
Query: 430 GMVPNDVTFLSLLFACS 446
P++ +S L+A S
Sbjct: 536 PENPSNYVSISNLYASS 552
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 183/495 (36%), Positives = 281/495 (56%), Gaps = 4/495 (0%)
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
MP+RN+VSWTAMISG +QN A+ F M G QF +SSA+RACA + ++ G
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ + K LFV S L D+Y+KCG + DA +FE + KD VSW AMI G +
Sbjct: 61 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKL 269
G +++ F+ M+ + + D L S L A G ++ K + +H ++KLG ES +
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGA-CGALKACKFGRSVHSSVVKLGFESDIFV 179
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKT-DIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+L D+Y+K G + SA ++ + +++S T LI G+ + K +F ++ +
Sbjct: 180 GNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEK-GLSVFVELRRQ 238
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ ++ ++ CAN A+L G Q+HA K D V + L+DMY K G + A
Sbjct: 239 GIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQA 298
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+AFDE+GD I+W SL++ + +HG G +AI+++++M G+ PN +TF+SLL CSH
Sbjct: 299 IQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHA 358
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
GL EG + F M Y ++P EH+SCV+DL R G+L+ A I +M +P A W +
Sbjct: 359 GLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCS 418
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
LGAC I+G+ +G+LAA L +EP+ S V+LSNIY W++ R R M + ++
Sbjct: 419 FLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNV 478
Query: 569 RKNPGYSFLQSSKKN 583
+K PGYS++ K
Sbjct: 479 KKLPGYSWVDVGYKT 493
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 187/388 (48%), Gaps = 10/388 (2%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
+ S ++ C + +H + G S L + + + Y+K G + A K F+ MP
Sbjct: 44 FSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP 103
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
++ VSWTAMI GY++ G E ALL F M+ V +Q S L AC ++ + GR
Sbjct: 104 CKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRS 163
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE-RIERKDVVSWNAMIGGLAMQG 211
+ S+ K F ++FV +AL D+Y+K G +E A +F E ++VVS+ +I G
Sbjct: 164 VHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETE 223
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
+ +F + RQG++P+ FT S+++A L + +Q+H ++K+ + ++
Sbjct: 224 QIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSS 283
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
L+D+Y K G + A Q + + I+ +L+S F + K+A +F+ M+ + +
Sbjct: 284 ILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQ-HGLGKDAIKIFERMVDRGVK 342
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG----NALIDMYAKSGEIAD 387
+ + +L C++ + G + + +Y G + +ID+ ++G + +
Sbjct: 343 PNAITFISLLTGCSHAGLVEEGLD---YFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKE 399
Query: 388 ANRAFDEMG-DKNVISWTSLIAGYAKHG 414
A + M + N W S + HG
Sbjct: 400 AKEFINRMPFEPNAFGWCSFLGACRIHG 427
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 134/271 (49%), Gaps = 2/271 (0%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
+ +D S L C KA + +H+ ++ G+ES++ + + Y+K GD+ SA
Sbjct: 137 EVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESA 196
Query: 85 RKAFDRMPE-RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
F E RNVVS+T +I GY + E L VF + R G+ N+FT+SS ++ACA
Sbjct: 197 SNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACAN 256
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
L+ G + + K F E+ FV S L+D+Y KCG +E A F+ I ++WN++
Sbjct: 257 QAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSL 316
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLG 262
+ G D+ +F M+ +G+KP+ T S+L S G+ + + + G
Sbjct: 317 VSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYG 376
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ + +ID+ + G ++ A + M
Sbjct: 377 VVPGEEHYSCVIDLLGRAGRLKEAKEFINRM 407
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 107/215 (49%), Gaps = 8/215 (3%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNG 60
++ +T Q+++ L + ++P+ T+ SL++ C ++ A Q +HA ++
Sbjct: 215 LIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKIN 274
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
++ + +S+ ++ Y K G + A +AFD + + ++W +++S + Q+G ++A+ +F
Sbjct: 275 FDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFE 334
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFV---ENLFVKSALLDLYA 177
M+ GV+ N T+ S L C+ ++ G S+ K V E + S ++DL
Sbjct: 335 RMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHY--SCVIDLLG 392
Query: 178 KCGWIEDAWILFERIE-RKDVVSWNAMIGGLAMQG 211
+ G +++A R+ + W + +G + G
Sbjct: 393 RAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHG 427
>gi|296082168|emb|CBI21173.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 178/534 (33%), Positives = 303/534 (56%), Gaps = 4/534 (0%)
Query: 48 QAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYA 107
+A + H I +G ++++ + +I YAK G++ A K F +R+ VSW MI+G+
Sbjct: 17 RASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFV 76
Query: 108 QNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLF 167
G E AL +M R G + +++ S L+ A + +++ G+ + + K + N+F
Sbjct: 77 NLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVF 136
Query: 168 VKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
SALLD+YAKC +EDA+ +F+ I ++ V+WNA+I G A G +FWL M +G
Sbjct: 137 AGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEG 196
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
++ D T +L +Q+H I+K GL S + ++I Y++ GSI A
Sbjct: 197 VEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAE 256
Query: 288 QLYRSMLKT---DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNIC 344
+++ ++T D +S ++++GF++ S++A F++M + + ID +L C
Sbjct: 257 RVFDGAIETRDLDHVSWNSILTGFSQS-GLSEDALKFFENMRSQYVVIDHYAFSAVLRSC 315
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWT 404
+++A+L LG+Q+H K + V ++LI MY+K G I DA ++FD + I+W
Sbjct: 316 SDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWN 375
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK 464
SLI GYA+HG G A++L+ MK + + +TF+++L ACSH GL EGW M +
Sbjct: 376 SLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESD 435
Query: 465 YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGEL 524
Y I PR EH++C++DL R G+L+ A +I M +P A +W +LGAC G+ L
Sbjct: 436 YGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQ 495
Query: 525 AARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
A +L ++EPE+ YV+LS+++ W+ ++LM+ER ++K PG+S+++
Sbjct: 496 VASHLLELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIE 549
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 94/191 (49%), Gaps = 1/191 (0%)
Query: 248 LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG 307
L + S H L IK G +S ++I YAK G IR A +++ + D +S +I+G
Sbjct: 15 LYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAG 74
Query: 308 FARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSY 367
F N + A + K M +D +L A V + +G+Q+H+ K
Sbjct: 75 FVNLGNF-ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEG 133
Query: 368 DAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMK 427
+ G+AL+DMYAK + DA F + +N ++W +LI+GYA+ G A L M+
Sbjct: 134 NVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCME 193
Query: 428 HEGMVPNDVTF 438
EG+ +D TF
Sbjct: 194 LEGVEIDDGTF 204
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 105/201 (52%), Gaps = 4/201 (1%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
++G + ALKF ++ ++D + ++L+ C D + +H ++ +G+E N
Sbjct: 282 QSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGF 341
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+++ +I Y+K G + ARK+FD P+ + ++W ++I GYAQ+G + AL +F M
Sbjct: 342 VASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRR 401
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA-LLDLYAKCGWIEDA 185
V+ + T+ + L AC+ + ++ G S++ + A ++DL + G +++A
Sbjct: 402 VKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEA 461
Query: 186 WILFERIE-RKDVVSWNAMIG 205
L E + D + W ++G
Sbjct: 462 KALIEAMPFEPDAMVWKTLLG 482
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 175/548 (31%), Positives = 302/548 (55%), Gaps = 1/548 (0%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
+T+ S + C A +HA+ + + + + T + YAK ++ ARK F+
Sbjct: 272 ATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNT 331
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
P S A+I GYA+ AL +F ++ +S + ++ + S AL AC+ ++ G
Sbjct: 332 FPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEG 391
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ G K N+ V + +LD+YAKCG + +A ++F+ +E KD VSWNA+I
Sbjct: 392 IQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQN 451
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
+++ LF SM+R M+PD +T GS+++A G L ++H +IK G+ +
Sbjct: 452 EHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVG 511
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
++ID+Y K G + A +++ + + +S ++ISGF+ + + A F M+ +
Sbjct: 512 SAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFS-SEKQGENALSYFSRMLQVGV 570
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
D+ +L+ICAN+A++ LG+QIH K Q D + + ++DMY+K G + D+
Sbjct: 571 IPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRI 630
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
F++ ++ ++W+++I YA HG G +AI+L+++M+ + + PN F+S+L AC+H G
Sbjct: 631 MFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGF 690
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
+G F +M + Y + P+ EH+SC+VDL R GQ+ A +I M + +W +L
Sbjct: 691 VDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLL 750
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
G C + GN + E AA +L ++P+ S YV+LSN+Y AG W K R M+ L+K
Sbjct: 751 GICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKK 810
Query: 571 NPGYSFLQ 578
PG S++Q
Sbjct: 811 EPGCSWIQ 818
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 138/505 (27%), Positives = 254/505 (50%), Gaps = 6/505 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D +T+ +L+ C + +H I G++S++ T ++ Y+ + A F
Sbjct: 169 DYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIF 228
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
MPERN V W+A+I+GY +N L ++ ML G+ +Q T++SA R+CA + +
Sbjct: 229 CEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFE 288
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G + K F + V +A LD+YAKC + DA +F S NA+I G A
Sbjct: 289 LGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYA 348
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
Q ++ +FRS+ + + D +L L A ++ Q+H L +K GL+ +
Sbjct: 349 RQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNIC 408
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +++D+YAK G++ A ++ M D +S A+I+ +++ H +E LF M+
Sbjct: 409 VANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNE-HVEETLALFVSMLRS 467
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
M DD ++ CA +LN G ++H K D VG+A+IDMY K G + +A
Sbjct: 468 TMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEA 527
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ + + ++ +SW S+I+G++ G A+ + +M G++P++ T+ ++L C++
Sbjct: 528 EKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANL 587
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
T E + I K ++ S +VD++++ G ++ + M + + + WSA
Sbjct: 588 A-TVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVT-WSA 645
Query: 509 ILGACSIYGNTSLGELAARNLFDME 533
++ A + +G LGE A + +M+
Sbjct: 646 MICAYAYHG---LGEDAIKLFEEMQ 667
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 133/517 (25%), Positives = 241/517 (46%), Gaps = 40/517 (7%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ + Q C + KA HA I G+ + +S ++ FY K ++ A FD+M
Sbjct: 40 TFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKM 99
Query: 92 PERNVVSWTAMISGYA-------------------------------QNGYDENALLVFS 120
P+R+V+SW MI GYA QNG+ ++ +F+
Sbjct: 100 PQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFT 159
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKC 179
M ++ + T++ L+AC + G + +IQ G F ++ +AL+D+Y+ C
Sbjct: 160 KMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMG-FDSDVVTGTALVDMYSTC 218
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
++ A+ +F + ++ V W+A+I G + L++ M+ +GM T S
Sbjct: 219 KKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAF 278
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
R+ G +Q+H +K N + + +D+YAK + A +++ +
Sbjct: 279 RSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQ 338
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
S ALI G+AR D EA ++F+ + + D++ L L C+ + G Q+H
Sbjct: 339 SHNALIVGYARQD-QVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGL 397
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
A K ++ V N ++DMYAK G + +A FD+M K+ +SW ++IA + ++ + E
Sbjct: 398 AVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEET 457
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF--SCV 477
+ L+ M M P+D TF S++ AC+ G E+ +I L + F S +
Sbjct: 458 LALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGL---DWFVGSAI 514
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACS 514
+D++ + G L A + ++ + T S W++I+ S
Sbjct: 515 IDMYCKCGMLVEAEKIHERLEERTTVS-WNSIISGFS 550
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 195/416 (46%), Gaps = 40/416 (9%)
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE 190
+ T+S + C+ ++ + G+ I FV +FV + LL Y KC + A+ +F+
Sbjct: 38 KLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFD 97
Query: 191 RIERKDVVSWNAMIGGLA-------------------------------MQGFNDDSFWL 219
++ ++DV+SWN MI G A GF+ S +
Sbjct: 98 KMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEI 157
Query: 220 FRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAK 279
F M ++ D T +L+A G + Q+H L I++G +S +L+D+Y+
Sbjct: 158 FTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYST 217
Query: 280 YGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCL 339
+ A+ ++ M + + + +A+I+G+ R+D + E L+K M+ + MG+
Sbjct: 218 CKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFT-EGLKLYKVMLDEGMGVSQATFAS 276
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN 399
CA +++ LG Q+HA+A K YD VG A +DMYAK + DA + F+ +
Sbjct: 277 AFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPT 336
Query: 400 VISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFT 459
S +LI GYA+ EA+E+++ ++ + ++++ L ACS EG +L
Sbjct: 337 RQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHG 396
Query: 460 DMIN---KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
+ + I + ++D++A+ G L A + M IK S W+AI+ A
Sbjct: 397 LAVKCGLDFNICVA----NTILDMYAKCGALMEACLIFDDMEIKDAVS-WNAIIAA 447
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 158/294 (53%), Gaps = 3/294 (1%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITNG 60
I+ A+ + +++ L +S + ++P Y S+++ C KKA +H +I +G
Sbjct: 444 IIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSG 503
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+ + + +I Y K G ++ A K +R+ ER VSW ++ISG++ ENAL FS
Sbjct: 504 MGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFS 563
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
ML+ GV + FTY++ L CA + ++ G+ I G I K + ++++ S ++D+Y+KCG
Sbjct: 564 RMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCG 623
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
++D+ I+FE+ ++D V+W+AMI A G +D+ LF M Q +KP+ S+LR
Sbjct: 624 NMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLR 683
Query: 241 ASVG-GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
A G + ++ GL+ + ++D+ + G + A +L SM
Sbjct: 684 ACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESM 737
>gi|118488304|gb|ABK95971.1| unknown [Populus trichocarpa]
Length = 749
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 184/555 (33%), Positives = 315/555 (56%), Gaps = 5/555 (0%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
ST + ++Q C + ++H ++I +G+ + + ++ Y D+ AR+ FD
Sbjct: 150 STMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLSMYVD-ADMECARELFDE 208
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAM-LRSGVRANQFTYSSALRACARMRWLQG 149
M E++V++W+ MI GY Q + L +F M L G+ + S L+ACA R +
Sbjct: 209 MHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRDVCT 268
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
GR++ G + F +LFV+++L+D+Y+KC A+ +F I +++ VSWN+M+ G +
Sbjct: 269 GRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQRNNVSWNSMLSGFVL 328
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
++ L SM ++ ++ D TL +IL+ + IH ++I+ G E++ +
Sbjct: 329 NENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFHCKSIHCVMIRRGSEANELV 388
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+LID YAK I A++++ M + D++S + +ISGFA EA ++++M
Sbjct: 389 LSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHC-GKPDEAIAVYQEMDRDL 447
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ + + + +L C+ A L + H A + + + VG A++DMY+K GEI +
Sbjct: 448 VKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYSKCGEILASR 507
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
RAFD++ KN+++W+++IA Y +G HEA+ L+ +MK G+ PN VT LS+L ACSH G
Sbjct: 508 RAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACSHGG 567
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM--NIKPTASLWS 507
L EG LF M+ + + P EH+SC+VD+ R G+L++A +I+ M N+K AS+W
Sbjct: 568 LVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGKLDTAIEVIKAMPDNLKNGASIWG 627
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
++L AC YG T LG+ A + ++EP S Y+V S++Y A G WD+A + R L +E+
Sbjct: 628 SLLSACRSYGLTELGKEAISRVLELEPSNSAGYLVASSMYAADGLWDDAARIRVLAKEKG 687
Query: 568 LRKNPGYSFLQSSKK 582
++ GYS + K
Sbjct: 688 VKVVAGYSLVHIDNK 702
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 143/535 (26%), Positives = 256/535 (47%), Gaps = 12/535 (2%)
Query: 45 AERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPE-RNVVSWTAMI 103
+ R +HA +I G++S + ++ FY + GD A F+ M R+ VSW +I
Sbjct: 62 SHRHGKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILI 121
Query: 104 SGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFV 163
G+ NG L F+ +G N T ++AC + G ++ G + K F
Sbjct: 122 HGHLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFW 181
Query: 164 ENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM 223
V+++LL +Y +E A LF+ + KDV++W+ MIGG +FR M
Sbjct: 182 AISSVQNSLLSMYVDAD-MECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKM 240
Query: 224 -MRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGS 282
+ G++PD + S+L+A ++ +H L+I G + + SLID+Y+K
Sbjct: 241 VLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKD 300
Query: 283 IRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLN 342
SA++++ + + + +S +++SGF ++N+S EA L M +++ D+V L +L
Sbjct: 301 AGSAFKVFNEISQRNNVSWNSMLSGFVLNENYS-EAQSLISSMRKERVETDEVTLVNILQ 359
Query: 343 ICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVIS 402
IC + IH + S + V +ALID YAK I A F M ++V+S
Sbjct: 360 ICKYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVS 419
Query: 403 WTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG-LTCEGWELFTDM 461
W+++I+G+A G EAI +Y++M + + PN +T ++LL ACS T L W +
Sbjct: 420 WSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAI 479
Query: 462 INKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG--NT 519
+ + VVD++++ G++ ++ Q+ +K + WSA++ A + G +
Sbjct: 480 RQGFA--SEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVT-WSAMIAAYGMNGLAHE 536
Query: 520 SLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGY 574
+L A ++P VL+ + + +++E L PG+
Sbjct: 537 ALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLE--PGF 589
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 198/406 (48%), Gaps = 12/406 (2%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS 83
P D +S+L+ C + L+H +I G++ +L + +I Y+K D S
Sbjct: 244 PGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGS 303
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
A K F+ + +RN VSW +M+SG+ N A + S+M + V ++ T + L+ C
Sbjct: 304 AFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKY 363
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
+ I + + N V SAL+D YAKC IE AW +F R+ R+DVVSW+ M
Sbjct: 364 FVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTM 423
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGL 263
I G A G D++ +++ M R +KP+ T+ ++L A EL + H + I+ G
Sbjct: 424 ISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGF 483
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
S + +++D+Y+K G I ++ + + + +I++ +A+I+ + + + EA LF
Sbjct: 484 ASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGM-NGLAHEALALFA 542
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK---YQSSYDAAVGNALIDMYA 380
+M + + V +L C++ + G + + + ++ + ++DM
Sbjct: 543 EMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHY--SCMVDMLG 600
Query: 381 KSGEIADANRAFDEMGD--KNVIS-WTSLIAGYAKHG---YGHEAI 420
++G++ A M D KN S W SL++ +G G EAI
Sbjct: 601 RAGKLDTAIEVIKAMPDNLKNGASIWGSLLSACRSYGLTELGKEAI 646
>gi|224132434|ref|XP_002328268.1| predicted protein [Populus trichocarpa]
gi|222837783|gb|EEE76148.1| predicted protein [Populus trichocarpa]
Length = 749
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 184/555 (33%), Positives = 315/555 (56%), Gaps = 5/555 (0%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
ST + ++Q C + ++H ++I +G+ + + ++ Y D+ AR+ FD
Sbjct: 150 STMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLSMYVD-ADMECARELFDE 208
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAM-LRSGVRANQFTYSSALRACARMRWLQG 149
M E++V++W+ MI GY Q + L +F M L G+ + S L+ACA R +
Sbjct: 209 MHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRDVCT 268
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
GR++ G + F +LFV+++L+D+Y+KC A+ +F I +++ VSWN+M+ G +
Sbjct: 269 GRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQRNNVSWNSMLSGFVL 328
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
++ L SM ++ ++ D TL +IL+ + IH ++I+ G E++ +
Sbjct: 329 NENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFHCKSIHCVMIRRGSEANELV 388
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+LID YAK I A++++ M + D++S + +ISGFA EA ++++M
Sbjct: 389 LSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGK-PDEAIAVYQEMDRDL 447
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ + + + +L C+ A L + H A + + + VG A++DMY+K GEI +
Sbjct: 448 VKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYSKCGEILASR 507
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
RAFD++ KN+++W+++IA Y +G HEA+ L+ +MK G+ PN VT LS+L ACSH G
Sbjct: 508 RAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACSHGG 567
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM--NIKPTASLWS 507
L EG LF M+ + + P EH+SC+VD+ R G+L++A +I+ M N+K AS+W
Sbjct: 568 LVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGKLDTAIEVIKAMPHNLKNGASIWG 627
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
++L AC YG T LG+ A + ++EP S Y+V S++Y A G WD+A + R L +E+
Sbjct: 628 SLLSACRSYGLTELGKEAISRVLELEPSNSAGYLVASSMYAADGLWDDAARIRVLAKEKG 687
Query: 568 LRKNPGYSFLQSSKK 582
++ GYS + K
Sbjct: 688 VKVVAGYSLVHIDNK 702
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 143/535 (26%), Positives = 256/535 (47%), Gaps = 12/535 (2%)
Query: 45 AERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPE-RNVVSWTAMI 103
+ R +HA +I G++S + ++ FY + GD A F+ M R+ VSW +I
Sbjct: 62 SHRHGKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILI 121
Query: 104 SGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFV 163
G+ NG L F+ +G N T ++AC + G ++ G + K F
Sbjct: 122 HGHLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFW 181
Query: 164 ENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM 223
V+++LL +Y +E A LF+ + KDV++W+ MIGG +FR M
Sbjct: 182 AISSVQNSLLSMYVDAD-MECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKM 240
Query: 224 -MRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGS 282
+ G++PD + S+L+A ++ +H L+I G + + SLID+Y+K
Sbjct: 241 VLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKD 300
Query: 283 IRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLN 342
SA++++ + + + +S +++SGF ++N+S EA L M +++ D+V L +L
Sbjct: 301 AGSAFKVFNEISQRNNVSWNSMLSGFVLNENYS-EAQSLISSMRKERVETDEVTLVNILQ 359
Query: 343 ICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVIS 402
IC + IH + S + V +ALID YAK I A F M ++V+S
Sbjct: 360 ICKYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVS 419
Query: 403 WTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG-LTCEGWELFTDM 461
W+++I+G+A G EAI +Y++M + + PN +T ++LL ACS T L W +
Sbjct: 420 WSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAI 479
Query: 462 INKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG--NT 519
+ + VVD++++ G++ ++ Q+ +K + WSA++ A + G +
Sbjct: 480 RQGFA--SEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVT-WSAMIAAYGMNGLAHE 536
Query: 520 SLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGY 574
+L A ++P VL+ + + +++E L PG+
Sbjct: 537 ALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLE--PGF 589
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 197/406 (48%), Gaps = 12/406 (2%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS 83
P D +S+L+ C + L+H +I G++ +L + +I Y+K D S
Sbjct: 244 PGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGS 303
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
A K F+ + +RN VSW +M+SG+ N A + S+M + V ++ T + L+ C
Sbjct: 304 AFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKY 363
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
+ I + + N V SAL+D YAKC IE AW +F R+ R+DVVSW+ M
Sbjct: 364 FVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTM 423
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGL 263
I G A G D++ +++ M R +KP+ T+ ++L A EL + H + I+ G
Sbjct: 424 ISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGF 483
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
S + +++D+Y+K G I ++ + + + +I++ +A+I+ + + + EA LF
Sbjct: 484 ASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGM-NGLAHEALALFA 542
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK---YQSSYDAAVGNALIDMYA 380
+M + + V +L C++ + G + + + ++ + ++DM
Sbjct: 543 EMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHY--SCMVDMLG 600
Query: 381 KSGEIADANRAFDEMGD--KNVIS-WTSLIAGYAKHG---YGHEAI 420
++G++ A M KN S W SL++ +G G EAI
Sbjct: 601 RAGKLDTAIEVIKAMPHNLKNGASIWGSLLSACRSYGLTELGKEAI 646
>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
Length = 847
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 207/557 (37%), Positives = 321/557 (57%), Gaps = 15/557 (2%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYES-NLHLSTKVIIFYAKVGDVLSARKAFDRMPE 93
SLLQ C R+ L+HA ++ +G + + L+ +I Y+ D+ SA + F MP
Sbjct: 175 SLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPR 234
Query: 94 RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMI 153
RN VSWT ++SG +QN +AL F+AM R+GV +F SSA RA A + R
Sbjct: 235 RNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARSC 294
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN 213
S G F LFV S L D+Y+KCG + +A +F+++ +KD V+W AMI G A G
Sbjct: 295 TASASVG-FDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSL 353
Query: 214 DDSFWLFRSMMRQGM-KPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKLTG 271
+ + FR M R+G+ D S+L AS GG++ +S+ IH + K G E +
Sbjct: 354 EAAVLSFRDMKREGLVGADQHVFCSVLSAS-GGLKDGWLSKSIHCCVTKAGFELEVAVRN 412
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTD-----IISCTALISGFARDDNHSKEAFDLFKDMI 326
+LID+YAK + SA ++ LK D ++S T++I G+ D +EA ++ ++
Sbjct: 413 ALIDMYAKSMDVESASRV----LKIDPGGWNVVSGTSMIDGYIETDC-VEEALVIYVELR 467
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ + ++ M+ CA A L G Q+HA K D+ VG+ L+DMY K G I+
Sbjct: 468 RQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLIS 527
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
+ + F+E+ + I+W ++I +A+HG+G EAI+ + +M + G+ PN + F+SLL ACS
Sbjct: 528 LSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACS 587
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
H GL EG + F M + I P+ EH+SC++D + R G+L+ AY I +M IKP A W
Sbjct: 588 HAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGW 647
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
++LGAC + G+ LGE+AA+NL +EP + +V LS IY + G W++ + RKLM +
Sbjct: 648 CSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDS 707
Query: 567 SLRKNPGYSFLQSSKKN 583
++K PG+S++ S+KK
Sbjct: 708 RIKKLPGFSWVDSNKKT 724
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 173/658 (26%), Positives = 294/658 (44%), Gaps = 110/658 (16%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYES-NLHLSTKVIIFYAKVGDVLSARKAFDRMPE 93
SLLQ C R+ L+HA ++ +G + + L+ +I Y+ D+ SA + F MP
Sbjct: 25 SLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPR 84
Query: 94 RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY------------------- 134
RN VSWT ++SG +QN +AL F+AM R+GV + Y
Sbjct: 85 RNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAASHC 144
Query: 135 -----------------------------SSALRACARMRWLQGGRMIQGS-IQKGRFVE 164
+S L++C R L+ GR++ + G
Sbjct: 145 HSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAA 204
Query: 165 NLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMM 224
+ F+ + L+ +Y+ C + A LF + R++ VSW ++ GL+ + D+ F +M
Sbjct: 205 STFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMR 264
Query: 225 RQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIR 284
R G+ P F L S RA+ ++ +G ++ + +L D+Y+K G +
Sbjct: 265 RAGVAPTRFALSSAARAAAALGAPLRARSC-TASASVGFDTELFVASNLADMYSKCGLLS 323
Query: 285 SAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDL-FKDMILKKM-GIDDVILCLMLN 342
A +++ M + D ++ TA+I G+A+ N S EA L F+DM + + G D + C +L+
Sbjct: 324 EACRVFDQMPQKDAVAWTAMIDGYAK--NGSLEAAVLSFRDMKREGLVGADQHVFCSVLS 381
Query: 343 ICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFD-EMGDKNVI 401
+ L + IH K + AV NALIDMYAKS ++ A+R + G NV+
Sbjct: 382 ASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVV 441
Query: 402 SWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELF--- 458
S TS+I GY + EA+ +Y +++ +G+ PN+ TF S++ C+ L +G +L
Sbjct: 442 SGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQV 501
Query: 459 --TDMIN--------------------KYRILPRAEH-----FSCVVDLFARRGQLESAY 491
TD+I ++ E+ ++ V+++FA+ G A
Sbjct: 502 IKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAI 561
Query: 492 NMIRQM---NIKPTASLWSAILGACSIYGNTSLGE---LAARNLFDMEPEKSVNYVVLSN 545
+M I+P + ++L ACS G G + + +EP K +Y + +
Sbjct: 562 QAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEP-KEEHYSCIID 620
Query: 546 IYTAAGAWDNARKTRKLMEERSLRKNP-------GYSFLQSSK-------KNILLLEP 589
Y AG D A K + E ++ N G ++ SK +N++ LEP
Sbjct: 621 TYGRAGRLDEA---YKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEP 675
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 103/463 (22%), Positives = 184/463 (39%), Gaps = 105/463 (22%)
Query: 129 ANQFTYSSALRACARMRWLQGGRMIQGS-IQKGRFVENLFVKSALLDLYAKCGWIEDAWI 187
A +S L++C R L+ GR++ + G + F+ + L+ +Y+ C + A
Sbjct: 18 ATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALR 77
Query: 188 LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIE 247
LF + R++ VSW ++ GL+ + D+ F +M R G+ P + ++G
Sbjct: 78 LFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKH 137
Query: 248 LMKISQIHD-------------------------------------------------LI 258
+ S H L+
Sbjct: 138 TLAASHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLV 197
Query: 259 IKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEA 318
+ +S L LI +Y+ + SA +L+ +M + + +S T L+SG +++ H+
Sbjct: 198 LSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADAL 257
Query: 319 FDLFKDMILKKMGIDDVILCLMLNIC------------ANVASLNLGRQIHAFAFKYQSS 366
+++ G+ L + AS ++G F
Sbjct: 258 ---AAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARSCTASASVGFDTELF------- 307
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
V + L DMY+K G +++A R FD+M K+ ++WT++I GYAK+G A+ ++ M
Sbjct: 308 ----VASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDM 363
Query: 427 KHEGMVPNDV-TFLSLLFACS-----------HTGLTCEGWELFTDMINKYRILPRAEHF 474
K EG+V D F S+L A H +T G+EL + N
Sbjct: 364 KREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNA---------- 413
Query: 475 SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
++D++A+ +ESA R + I P W+ + G I G
Sbjct: 414 --LIDMYAKSMDVESAS---RVLKIDPGG--WNVVSGTSMIDG 449
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 104/214 (48%), Gaps = 4/214 (1%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITN 59
+++ +T +++AL + ++P+ T+ S+++ C + Q +HA +I
Sbjct: 445 SMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKT 504
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
+ + + ++ Y K G + + + F+ + R ++W A+I+ +AQ+G+ A+ F
Sbjct: 505 DLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAF 564
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK-SALLDLYAK 178
M+ SG+R N + S L AC+ + G S+++ +E S ++D Y +
Sbjct: 565 DRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGR 624
Query: 179 CGWIEDAWILFERIE-RKDVVSWNAMIGGLAMQG 211
G +++A+ + + + W +++G M+G
Sbjct: 625 AGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRG 658
>gi|224098357|ref|XP_002311156.1| predicted protein [Populus trichocarpa]
gi|222850976|gb|EEE88523.1| predicted protein [Populus trichocarpa]
Length = 535
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 179/527 (33%), Positives = 301/527 (57%), Gaps = 2/527 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IH G +S++ ++T ++ YA+ G+V +A++ F + R++V+W+A+I+ + Q+GY
Sbjct: 10 IHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAIIAAFVQSGY 69
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ AL +F +M G++AN+ S+L ACA + L+ G+ + K ++ V +A
Sbjct: 70 PQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANVDLDISVGTA 129
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+ +YAKCG+ A LF R+ KDVV+WNAMI G A G + +F + + P+
Sbjct: 130 LVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHKLQLSELNPN 189
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSA-YQLY 290
T+ +L A +L + S IH IIK G ES + +LID+YAK GS+ A + +
Sbjct: 190 SGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCGSLSGAEFLFH 249
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
R+ + D +S +I+G+ H+ +AF F M L+ + + V + +L A++++L
Sbjct: 250 RTGCRKDEVSWNVMIAGYMHS-GHAIDAFSAFCQMKLENIQPNIVTIVTVLPAVAHLSAL 308
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
G +HA+ + VGN LIDMYAK G + + + F EM +K+ +SW ++AGY
Sbjct: 309 RAGMTLHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVSWNVMLAGY 368
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
A HG G AIEL+ +M+ + + +F+++L AC H GL EG ++F M ++++ P
Sbjct: 369 AVHGRGSCAIELFSRMQDSEIRLDSFSFINVLSACRHAGLIGEGRKIFDSMSKQHQLEPD 428
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
EH++C+ DL R G ++I+ M ++P A +W A+LGA +++ N L E A +L
Sbjct: 429 LEHYACMADLLGRAGLFNEVLDLIKSMPMEPDAGVWGALLGASTMHSNVQLAEFALHHLD 488
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
+E + +Y LSN Y +G W + TR + + LRK+PGYS++
Sbjct: 489 KLEHKNLTHYAALSNTYARSGRWADVGNTRSKITKTGLRKSPGYSWV 535
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 199/418 (47%), Gaps = 10/418 (2%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPSTY--MSLLQFCIDKKAERQAHLIHAHIITNG 60
I+ A ++G ++AL S + L + +S L C + + + +H +
Sbjct: 60 IIAAFVQSGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKAN 119
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+ ++ + T ++ YAK G A F+RMP ++VV+W AMI+GYAQ G AL +F
Sbjct: 120 VDLDISVGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFH 179
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
+ S + N T L A A + L G I G I K F VK+AL+D+YAKCG
Sbjct: 180 KLQLSELNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCG 239
Query: 181 WIEDAWILFERIE-RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
+ A LF R RKD VSWN MI G G D+F F M + ++P+ T+ ++L
Sbjct: 240 SLSGAEFLFHRTGCRKDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTVL 299
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
A L +H +I++G +S + LID+YAK G + + +++ M D +
Sbjct: 300 PAVAHLSALRAGMTLHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTV 359
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI-HA 358
S +++G+A S A +LF M ++ +D +L+ C + + GR+I +
Sbjct: 360 SWNVMLAGYAVHGRGSC-AIELFSRMQDSEIRLDSFSFINVLSACRHAGLIGEGRKIFDS 418
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSG---EIADANRAFDEMGDKNVISWTSLIAGYAKH 413
+ ++Q D + D+ ++G E+ D ++ D V W +L+ H
Sbjct: 419 MSKQHQLEPDLEHYACMADLLGRAGLFNEVLDLIKSMPMEPDAGV--WGALLGASTMH 474
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 192/386 (49%), Gaps = 5/386 (1%)
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
MR L G I ++ ++ V + ++ +YA+CG ++ A LF+ I+ +D+V+W+A+
Sbjct: 1 MRALGRGTEIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAI 60
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGL 263
I G+ ++ LFRSM +G++ + L S L A L +H +K +
Sbjct: 61 IAAFVQSGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANV 120
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
+ + +L+ +YAK G A L+ M D+++ A+I+G+A+ A ++F
Sbjct: 121 DLDISVGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQ-IGEPFPALEMFH 179
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
+ L ++ + + +L A + L+ G IH K + V ALIDMYAK G
Sbjct: 180 KLQLSELNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCG 239
Query: 384 EIADANRAFDEMG-DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
++ A F G K+ +SW +IAGY G+ +A + +MK E + PN VT +++L
Sbjct: 240 SLSGAEFLFHRTGCRKDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTVL 299
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
A +H G L +I + + +C++D++A+ G L+ + + +M K T
Sbjct: 300 PAVAHLSALRAGMTLHAYVI-RMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDT 358
Query: 503 ASLWSAILGACSIYGNTSLG-ELAAR 527
S W+ +L +++G S EL +R
Sbjct: 359 VS-WNVMLAGYAVHGRGSCAIELFSR 383
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 196/575 (34%), Positives = 324/575 (56%), Gaps = 13/575 (2%)
Query: 14 KQALKFSLSCPDTL-LDPSTYMSLL----QFCIDKKAERQAHLIHAHIITNGY-ESNLHL 67
++A++ + D++ L+P++YM +L +F + + +R+ +HA +I +G + + +
Sbjct: 367 EEAVELFMEMKDSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAI 426
Query: 68 STKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV 127
+I YAK G + A F M ++ V+W +MI+G QN A+ F M R+ +
Sbjct: 427 GNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTEL 486
Query: 128 RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWI 187
+ FT SAL +CA + W+ G + K ++ V +ALL LY +CG++++
Sbjct: 487 YPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQK 546
Query: 188 LFERIERKDVVSWNAMIGGLA-MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
F + D VSWN++IG LA + ++ F MMR G P+ T +IL A+V +
Sbjct: 547 AFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITIL-AAVSSL 605
Query: 247 ELMKIS-QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML-KTDIISCTAL 304
L ++ QIH L++K + + + +L+ Y K G + ++ M + D +S ++
Sbjct: 606 SLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSM 665
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
ISG+ ++ K A D+ M+ K +D +L+ CA VA+L G ++H + +
Sbjct: 666 ISGYIHNELLPK-AMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRAC 724
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
D +G+AL+DMYAK G I A+R F+ M +N+ SW S+I+GYA+HG+G ++++L+
Sbjct: 725 LESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFA 784
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
+MK +G +P+ VTF+ +L ACSH GL EG+ F M Y + PR EHFSC+VDL R
Sbjct: 785 QMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRV 844
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYG--NTSLGELAARNLFDMEPEKSVNYVV 542
G+L + + QM +KP +W +LGAC NT+LG AA L +MEP +VNY++
Sbjct: 845 GELNKMEDFLNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVNYIL 904
Query: 543 LSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
LSN+Y + G WD+ KTR M + ++K G S++
Sbjct: 905 LSNMYASGGKWDDVAKTRVAMRKAFVKKEAGCSWV 939
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 134/442 (30%), Positives = 224/442 (50%), Gaps = 25/442 (5%)
Query: 40 CIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSW 99
C K AE +H + NG+ ++L L +I YA+VGD+ S RK FD MP RN+VSW
Sbjct: 87 CGSKDAEE----LHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSW 142
Query: 100 TAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM--RWLQGGRMIQGSI 157
+ +ISGY +N A +F M+ G N + + S +RAC L+ G I G +
Sbjct: 143 SCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLM 202
Query: 158 QKGRFVENLFVKSALLDLYAKC-GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDS 216
K ++V ++ + L+ +Y G ++ A F+ I +++VS N+MI +G +
Sbjct: 203 SKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSA 262
Query: 217 FWLFRSMMRQ----GMKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGLESSNKLT 270
F +F +M ++ G+KP+ +T GS++ A S+ L+ + Q+ + K G +
Sbjct: 263 FDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVG 322
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF---KDMIL 327
+L+ +AK GSI A +++ M +++S LI G R +EA +LF KD +
Sbjct: 323 SALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVR-QKRGEEAVELFMEMKDSVE 381
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ-SSYDAAVGNALIDMYAKSGEIA 386
+IL G ++HAF + + A+GN LI+MYAK G I
Sbjct: 382 LNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAIN 441
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
DA F M +K+ ++W S+I G ++ EA++ +++M+ + P++ T +S L +C+
Sbjct: 442 DACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCA 501
Query: 447 HTG-------LTCEGWELFTDM 461
G L CEG +L D+
Sbjct: 502 SLGWISVGEQLHCEGLKLGLDL 523
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 147/319 (46%), Gaps = 20/319 (6%)
Query: 253 QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDD 312
++H + K G + L +LI++YA+ G + S +++ M +++S + LISG+ R+
Sbjct: 94 ELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRN- 152
Query: 313 NHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS--LNLGRQIHAFAFKYQSSYDAA 370
EA +LF+ M+ + ++ C L G QIH K Q D
Sbjct: 153 RMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVT 212
Query: 371 VGNALIDMYAKS-GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE 429
N LI MY + G + A RAFD + +N++S S+I+ Y + G A +++ M+ E
Sbjct: 213 ASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKE 272
Query: 430 ----GMVPNDVTFLSLLFA-CS--HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFA 482
G+ PN+ TF SL+ A CS ++GL E + K L S +V FA
Sbjct: 273 VMGDGLKPNEYTFGSLISATCSLANSGLVL--LEQLLTRVEKSGFLHDLYVGSALVSGFA 330
Query: 483 RRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVN--- 539
+ G + A N+ ++M+ + SL I+G GE A +M+ +N
Sbjct: 331 KAGSIGYAKNIFQKMSYRNVVSLNGLIIGLV----RQKRGEEAVELFMEMKDSVELNPNS 386
Query: 540 YVVLSNIYTAAGAWDNARK 558
Y+++ + +N ++
Sbjct: 387 YMIILTAFPEFHVLENGKR 405
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 191/584 (32%), Positives = 309/584 (52%), Gaps = 37/584 (6%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYA--KVGDVLSARK 86
+PST L+ C +KK +Q +HAH++ G + +TK+ A + A K
Sbjct: 29 NPSTVPILIDKCANKKHLKQ---LHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACK 85
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR-ANQFTYSSALRACARMR 145
FD++P N+ +W +I +A + LLVF ML R N +T+ ++A +
Sbjct: 86 VFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVS 145
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
L G+ I G + K F +LF+ ++L+ Y+ G ++ A+++F +I KD+VSWN+MI
Sbjct: 146 SLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMIS 205
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
G G +++ LF+ M + +P+ T+ +L A I+L D I + G++
Sbjct: 206 GFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDI 265
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR--------------- 310
+ L+ +++D+Y K GS+ A +L+ M + DI+S T +I G+A+
Sbjct: 266 NLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMP 325
Query: 311 ---------------DDNHSKEAFDLFKDMILKK-MGIDDVILCLMLNICANVASLNLGR 354
+ KEA +F+++ L K ++V L L CA + +++LG
Sbjct: 326 REDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGG 385
Query: 355 QIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG 414
IH + K + + +LIDMY+K G + A F + ++V W+++IAG A HG
Sbjct: 386 WIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHG 445
Query: 415 YGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF 474
+G AI+L+ KM+ + PN VTF +LL ACSH+GL EG F M Y ++P ++H+
Sbjct: 446 HGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHY 505
Query: 475 SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEP 534
+C+VD+ R G LE A +I +M I P+AS+W A+LGAC IYGN L E+A L + +
Sbjct: 506 ACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDS 565
Query: 535 EKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
YV+LSNIY AG WD + R+ M+ L K PG S ++
Sbjct: 566 NNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIE 609
>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
Length = 861
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 195/599 (32%), Positives = 324/599 (54%), Gaps = 25/599 (4%)
Query: 3 IVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
I+ + L ALKF + + + S Y S+L+ C R +HAH + +
Sbjct: 210 IIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSD 269
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+ ++ + T + YAK ++ A+ FD N S+ AMI+GY+Q + ALL+F
Sbjct: 270 FAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFH 329
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
++ SG+ ++ + S RACA ++ L G I G K ++ V +A +D+Y KC
Sbjct: 330 RLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQ 389
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+ +A+ +F+ + R+D VSWNA+I G ++ +LF SM+R ++PD FT GSIL+
Sbjct: 390 ALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILK 449
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
A GG L +IH I+K G+ S++ + SLID+Y+K G I A +++ + +S
Sbjct: 450 ACTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS 508
Query: 301 CT--------------------ALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLM 340
T ++ISG+ + S++A LF M+ + D +
Sbjct: 509 GTMEELEKMHNKRLQEMCVSWNSIISGYVMKE-QSEDAQMLFTRMMEMGITPDKFTYATV 567
Query: 341 LNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNV 400
L+ CAN+AS LG+QIHA K + D + + L+DMY+K G++ D+ F++ ++
Sbjct: 568 LDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDF 627
Query: 401 ISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTD 460
++W ++I GYA HG G EAI+L+++M E + PN VTF+S+L AC+H GL +G E F
Sbjct: 628 VTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYM 687
Query: 461 MINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIY-GNT 519
M Y + P+ H+S +VD+ + G+++ A +IR+M + +W +LG C+I+ N
Sbjct: 688 MKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNV 747
Query: 520 SLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+ E A L ++P+ S Y +LSN+Y AG W+ R+ M L+K PG S+++
Sbjct: 748 EVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVE 806
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 148/556 (26%), Positives = 259/556 (46%), Gaps = 60/556 (10%)
Query: 70 KVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA 129
K+I Y+K D+ A F+ MP R+VVSW +M+SGY QNG ++ VF M R G+
Sbjct: 77 KMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEF 136
Query: 130 NQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILF 189
+ T++ L+ C+ + G I G + + ++ SALLD+YAK ++ +F
Sbjct: 137 DGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVF 196
Query: 190 ERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELM 249
+ I K+ VSW+A+I G + F+ M + S+LR+ EL
Sbjct: 197 QGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELR 256
Query: 250 KISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFA 309
Q+H +K + + + +D+YAK +++ A L+ + + S A+I+G++
Sbjct: 257 LGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYS 316
Query: 310 RDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDA 369
+++ H +A LF ++ +G D++ L + CA V L+ G QI+ A K S D
Sbjct: 317 QEE-HGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDV 375
Query: 370 AVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE 429
V NA IDMY K +A+A R FDEM ++ +SW ++IA + ++G G+E + L+ M
Sbjct: 376 CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS 435
Query: 430 GMVPNDVTFLSLLFACS----------HTGLTCEGWE-------LFTDMINKYRILPRAE 472
+ P++ TF S+L AC+ H+ + G DM +K ++ AE
Sbjct: 436 RIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAE 495
Query: 473 H--------------------------------FSCVVDLFARRGQLESA---YNMIRQM 497
++ ++ + + Q E A + + +M
Sbjct: 496 KIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEM 555
Query: 498 NIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYV--VLSNIYTAAGAWDN 555
I P ++ +L C+ + LG+ + E + V Y+ L ++Y+ G +
Sbjct: 556 GITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDV-YICSTLVDMYSKCGDLHD 614
Query: 556 ARKTRKLMEERSLRKN 571
+R LM E+SLR++
Sbjct: 615 SR----LMFEKSLRRD 626
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 134/510 (26%), Positives = 248/510 (48%), Gaps = 24/510 (4%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
D T+ +L+ C + IH ++ G ++++ ++ ++ YAK + + +
Sbjct: 136 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F +PE+N VSW+A+I+G QN AL F M + +Q Y+S LR+CA + L
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 255
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G + K F + V++A LD+YAKC ++DA ILF+ E + S+NAMI G
Sbjct: 256 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGY 315
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
+ + + LF +M G+ D +L + RA L + QI+ L IK L
Sbjct: 316 SQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDV 375
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ + ID+Y K ++ A++++ M + D +S A+I+ ++ + F LF M+
Sbjct: 376 CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLF-LFVSMLR 434
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
++ D+ +L C SL G +IH+ K + +++VG +LIDMY+K G I +
Sbjct: 435 SRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEE 493
Query: 388 ANR----------------AFDEMGDKNV----ISWTSLIAGYAKHGYGHEAIELYKKMK 427
A + ++M +K + +SW S+I+GY +A L+ +M
Sbjct: 494 AEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMM 553
Query: 428 HEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQL 487
G+ P+ T+ ++L C++ G ++ +I K + S +VD++++ G L
Sbjct: 554 EMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK-ELQSDVYICSTLVDMYSKCGDL 612
Query: 488 ESAYNMIRQMNIKPTASLWSAILGACSIYG 517
+ M + +++ W+A++ + +G
Sbjct: 613 HDSRLMFEK-SLRRDFVTWNAMICGYAHHG 641
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 103/237 (43%), Gaps = 39/237 (16%)
Query: 344 CANVASLNLGRQIHA-------------------------------FAFKYQSSYDAAVG 372
CA +L LG+Q HA F D
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
N +I+ Y+KS ++ AN F+ M ++V+SW S+++GY ++G ++IE++ M EG+
Sbjct: 76 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135
Query: 433 PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYN 492
+ TF +L CS T G ++ ++ + S ++D++A+ + +
Sbjct: 136 FDGRTFAIILKVCSFLEDTSLGMQIH-GIVVRVGCDTDVVAASALLDMYAKGKRFVESLR 194
Query: 493 MIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTA 549
+ + + K + S WSAI+ C +L LA + +M+ VN V +IY +
Sbjct: 195 VFQGIPEKNSVS-WSAIIAGCV---QNNLLSLALKFFKEMQK---VNAGVSQSIYAS 244
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 187/562 (33%), Positives = 319/562 (56%), Gaps = 3/562 (0%)
Query: 22 SCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDV 81
SC D ++ T M L+ C D + I + G+ +L++ + ++ F K G +
Sbjct: 138 SC-DIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYL 196
Query: 82 LSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC 141
A+K FD MPE++VV W ++I GY Q G ++ +F M+ G+R + T ++ L+AC
Sbjct: 197 ADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKAC 256
Query: 142 ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN 201
+ + G + ++FV ++L+D+Y+ G A ++F+ + + ++SWN
Sbjct: 257 GQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWN 316
Query: 202 AMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKL 261
AMI G G +S+ LFR +++ G D TL S++R +L +H II+
Sbjct: 317 AMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRK 376
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDL 321
LES L+ +++D+Y+K G+I+ A ++ M K ++I+ TA++ G +++ ++++A L
Sbjct: 377 ELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQN-GYAEDALKL 435
Query: 322 FKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
F M +K+ + V L +++ CA++ SL GR +HA ++ ++DA + +ALIDMYAK
Sbjct: 436 FCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAK 495
Query: 382 SGEIADANRAFD-EMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
G+I A + F+ E K+VI S+I GY HG+G A+ +Y +M E + PN TF+S
Sbjct: 496 CGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVS 555
Query: 441 LLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIK 500
LL ACSH+GL EG LF M + + P+ +H++C+VDL +R G+LE A +++QM +
Sbjct: 556 LLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQ 615
Query: 501 PTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTR 560
P+ + A+L C + NT++G A L ++ S YV+LSNIY A W++ R
Sbjct: 616 PSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVMLSNIYAEARKWESVNYIR 675
Query: 561 KLMEERSLRKNPGYSFLQSSKK 582
LM + ++K PGYS ++ K
Sbjct: 676 GLMRMQGMKKIPGYSLIEVGNK 697
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 159/577 (27%), Positives = 288/577 (49%), Gaps = 53/577 (9%)
Query: 30 PSTYMSLL-QFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
PS + SLL QF IHA II N + L+ K+I Y+ +G + AR F
Sbjct: 46 PSVFSSLLHQF---SNTLIHVKSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVF 102
Query: 89 DR--MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
D+ +PE V + AMI+G+ +N +F M + N +T AL+AC +
Sbjct: 103 DQCSLPETAVCN--AMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLD 160
Query: 147 LQ-GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
+ G +I+ ++++G F +L+V S++++ K G++ DA +F+ + KDVV WN++IG
Sbjct: 161 DEVGMEIIRAAVRRG-FHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIG 219
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQI-HDLIIKLGLE 264
G +G +S +F M+ G++P T+ ++L+A G L K+ H ++ LG+
Sbjct: 220 GYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKA-CGQSGLKKVGMCAHSYVLALGMG 278
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ + SL+D+Y+ G SA ++ SM +IS A+ISG+ + + E++ LF+
Sbjct: 279 NDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQ-NGMIPESYALFRR 337
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
++ G D L ++ C+ + L GR +H+ + + + A++DMY+K G
Sbjct: 338 LVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGA 397
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
I A F MG KNVI+WT+++ G +++GY +A++L+ +M+ E + N VT +SL+
Sbjct: 398 IKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHC 457
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA-------------- 490
C+H G +G + I ++ A S ++D++A+ G++ SA
Sbjct: 458 CAHLGSLTKGRTVHAHFI-RHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVI 516
Query: 491 ---------------------YNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
Y+ + + +KP + + ++L ACS G G+ ++
Sbjct: 517 LCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSM 576
Query: 530 ---FDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
D+ P+ +Y L ++++ AG + A + K M
Sbjct: 577 ERDHDVRPQHK-HYACLVDLHSRAGRLEEADELVKQM 612
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 181/491 (36%), Positives = 282/491 (57%), Gaps = 7/491 (1%)
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLR--SGVRANQFTYSSALRACARMRWLQG 149
P + + ++ + G+ E+AL +F ML S A+Q T + AL++C+RM L
Sbjct: 79 PPLSTPCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDV 138
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
GR +Q K V + FV S+L+ +YA CG + A ++F+ E VV WNA++
Sbjct: 139 GRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLK 198
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS--VGGIELMKISQIHDLIIKLGLESSN 267
G + +F+ M+ G+ D TL S++ A +G +L K H + + GL +
Sbjct: 199 NGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGH--VDEEGLARNP 256
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
KL +L+D+YAK G I A +L+ M D+++ +A+ISG+ + D +EA LF +M L
Sbjct: 257 KLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQ-CREALGLFSEMQL 315
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
++ +DV + +L+ CA + +L G+ +H++ + + S +G AL+D YAK G I D
Sbjct: 316 ARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDD 375
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A AF+ M KN +WT+LI G A +G G EA+EL+ M+ G+ P DVTF+ +L ACSH
Sbjct: 376 AVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSH 435
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
+ L EG F M Y I PR EH+ C+VDL R G ++ AY IR M I+P A +W
Sbjct: 436 SCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWR 495
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
A+L +C+++ N +GE A + + + P S +YV+LSNIY +AG W +A RK M++R
Sbjct: 496 ALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRG 555
Query: 568 LRKNPGYSFLQ 578
+ K PG S ++
Sbjct: 556 IEKTPGCSLIE 566
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 123/435 (28%), Positives = 209/435 (48%), Gaps = 24/435 (5%)
Query: 3 IVRANFKTGQLKQALKFSL-------SCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAH 55
++RA G + AL + +CP D T L+ C A + A+
Sbjct: 89 LMRAFLHAGHPEDALHLFIEMLHAASACP---ADQHTAACALKSCSRMCALDVGRGVQAY 145
Query: 56 IITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENA 115
+ G ++ + + +I YA GDV +AR FD E VV W A+++ Y +NG
Sbjct: 146 AVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEV 205
Query: 116 LLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDL 175
+ +F ML GV ++ T S + AC R+ + G+ + G + + N + +AL+D+
Sbjct: 206 VEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDM 265
Query: 176 YAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTL 235
YAKCG I A LF+ ++ +DVV+W+AMI G ++ LF M ++P+ T+
Sbjct: 266 YAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTM 325
Query: 236 GSILRAS--VGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
S+L A +G +E K +H + + L + L +L+D YAK G I A + + SM
Sbjct: 326 VSVLSACAVLGALETGK--WVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESM 383
Query: 294 LKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGID--DVILCLMLNICANVASLN 351
+ + TALI G A + +EA +LF M ++ GI+ DV +L C++ +
Sbjct: 384 PVKNSWTWTALIKGMA-TNGRGREALELFSSM--REAGIEPTDVTFIGVLMACSHSCLVE 440
Query: 352 LGRQ-IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAG 409
GR+ + A Y ++D+ ++G + +A + M + N + W +L++
Sbjct: 441 EGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSS 500
Query: 410 YAKH---GYGHEAIE 421
A H G G EA++
Sbjct: 501 CAVHRNVGIGEEALK 515
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 180/554 (32%), Positives = 305/554 (55%), Gaps = 1/554 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T++S+L C++ + + + I +E +L + T +I YA+ A + F
Sbjct: 260 DRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVF 319
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
RM + N+++W+A+I+ +A +G+ AL F M + G+ N+ T+ S L L+
Sbjct: 320 GRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLE 379
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
I I + + +++AL+++Y +C +DA +F+++E +++SWN+MIG
Sbjct: 380 ELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYV 439
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
+DD+ LFR+M +QG++PD +IL A G +H + + GL S
Sbjct: 440 QCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPL 499
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ SL+++YAK G + A + + M + I + LI+G+A S+EA + ++ + L+
Sbjct: 500 VQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALH-GRSREALEAYQKLQLE 558
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ +D V +LN C + SL G+ IH+ A + D V NAL +MY+K G + +A
Sbjct: 559 AIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENA 618
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
R FD M ++ +SW ++ YA+HG E ++L +KM+ EG+ N +TF+S+L +CSH
Sbjct: 619 RRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHA 678
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
GL EG + F + + I + EH+ C+VDL R G+L+ A I +M ++P W++
Sbjct: 679 GLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWAS 738
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+LGAC + + G+LAA L +++P S VVLSNIY+ G W NA K R+ M R +
Sbjct: 739 LLGACRVQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRV 798
Query: 569 RKNPGYSFLQSSKK 582
+K PG S +Q K
Sbjct: 799 KKVPGISSIQVKNK 812
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 139/492 (28%), Positives = 262/492 (53%), Gaps = 11/492 (2%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T++++L +D A R+ IH+ + + + ++ ++T ++ Y K G + ARK FD M
Sbjct: 162 TFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGM 221
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P R+V +W +MIS Y+ + A +F M + G R ++ T+ S L AC LQ G+
Sbjct: 222 PCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGK 281
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
++ SI + F +LFV +AL+ +YA+C EDA +F R+++ ++++W+A+I A G
Sbjct: 282 HVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHG 341
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
++ FR M ++G+ P+ T S+L L ++S+IH LI + GL+ + +
Sbjct: 342 HCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRN 401
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
+L++VY + S A ++ + ++IS ++I + + + H +A LF+ M + +
Sbjct: 402 ALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHD-DALQLFRTMQQQGIQ 460
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
D V +L C + + +H + V +L++MYAK+GE+ A
Sbjct: 461 PDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVI 520
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLT 451
EM ++ + +W LI GYA HG EA+E Y+K++ E + + VTF+S+L AC+ +
Sbjct: 521 LQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSL 580
Query: 452 CEGWELFTDMI----NKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
EG + ++ + + I+ A + +++++ G +E+A + M I+ S W+
Sbjct: 581 AEGKMIHSNAVECGLDSDVIVKNA-----LTNMYSKCGSMENARRIFDSMPIRSAVS-WN 634
Query: 508 AILGACSIYGNT 519
+L A + +G +
Sbjct: 635 GMLQAYAQHGES 646
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 162/546 (29%), Positives = 263/546 (48%), Gaps = 68/546 (12%)
Query: 74 FYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFT 133
Y++ G + A AF ++ RNVVSW MIS Y+ + AL +F AML GV N T
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 134 YSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI 192
+ L +C R L+ G ++ S+++G F +N V +ALL++Y KCG + DA +FE +
Sbjct: 61 LVAVLNSCGSFRELRDGILVHALSLERG-FFQNTLVATALLNMYGKCGTLLDAQSVFEEM 119
Query: 193 ERKDVVSWNAMIGGLAMQGFNDDSFW-----LFRSMMRQGMKPDCFTLGSILRASVGGIE 247
K+VV+WNAM+G ++QG W LF M+ +G+K + T ++L + V
Sbjct: 120 AEKNVVTWNAMLGVYSLQG----CCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDA 175
Query: 248 LMKISQIHDLIIKLGLESSNKL----TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTA 303
L K IH + ES + L +L++ Y K GS+ A +++ M + + +
Sbjct: 176 LRKGKFIHSCV----RESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNS 231
Query: 304 LISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY 363
+IS ++ + S EAF +F+ M + D V +L+ C N +L G+ + +
Sbjct: 232 MISAYSISER-SGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISET 290
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELY 423
D VG ALI MYA+ DA + F M N+I+W+++I +A HG+ EA+ +
Sbjct: 291 SFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYF 350
Query: 424 KKMKHEGMVPNDVTFLSLLFACS-----------HTGLTCEGWELFTDM----INKYR-- 466
+ M+ EG++PN VTF+SLL + H +T G + T M +N Y
Sbjct: 351 RMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRC 410
Query: 467 -------------ILPRAEHFSCVVDLFARRGQLESAYNMIR---QMNIKPTASLWSAIL 510
LP ++ ++ ++ + + + A + R Q I+P + IL
Sbjct: 411 ESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTIL 470
Query: 511 GACSI--YGNTSLGELAARNLFDMEPEKS------VNYVVLSNIYTAAGAWDNARKTRKL 562
GAC+I +G T R L E+S + L N+Y AG D A +
Sbjct: 471 GACTIGSHGRT-------RKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQE 523
Query: 563 MEERSL 568
M+E+ +
Sbjct: 524 MDEQQI 529
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 140/547 (25%), Positives = 282/547 (51%), Gaps = 5/547 (0%)
Query: 6 ANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNL 65
+++K+ Q AL ++ + T +++L C + R L+HA + G+ N
Sbjct: 34 SSYKSFQEALALFHAMLLEGVAPNAITLVAVLNSCGSFRELRDGILVHALSLERGFFQNT 93
Query: 66 HLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYD-ENALLVFSAMLR 124
++T ++ Y K G +L A+ F+ M E+NVV+W AM+ Y+ G + A+ +F+ ML
Sbjct: 94 LVATALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLL 153
Query: 125 SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIED 184
GV+AN T+ + L + L+ G+ I +++ ++FV +AL++ Y KCG + D
Sbjct: 154 EGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTD 213
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG 244
A +F+ + + V +WN+MI ++ + ++F++F+ M ++G + D T SIL A V
Sbjct: 214 ARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVN 273
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
L + + I + E + +LI +YA+ S A Q++ M +T++I+ +A+
Sbjct: 274 PETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAI 333
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
I+ FA D H EA F+ M + + + V +LN + L +IH ++
Sbjct: 334 ITAFA-DHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHG 392
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
+ NAL+++Y + DA FD++ N+ISW S+I Y + +A++L++
Sbjct: 393 LDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFR 452
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
M+ +G+ P+ V F+++L AC+ G +L + + + + +V+++A+
Sbjct: 453 TMQQQGIQPDRVNFMTILGACT-IGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKA 511
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL-FDMEPEKSVNYVVL 543
G+L+ A ++++M+ + + W+ ++ +++G + A + L + P V ++ +
Sbjct: 512 GELDVAEVILQEMD-EQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISV 570
Query: 544 SNIYTAA 550
N T++
Sbjct: 571 LNACTSS 577
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 97/188 (51%), Gaps = 8/188 (4%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D T++S+L C + + +IH++ + G +S++ + + Y+K G + +AR+
Sbjct: 562 VDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRI 621
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD MP R+ VSW M+ YAQ+G E L + M + GV+ N T+ S L +C+ +
Sbjct: 622 FDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLI 681
Query: 148 QGGRMIQGSIQKGRFVENLFVKS----ALLDLYAKCGWIEDAWILFERIE-RKDVVSWNA 202
G S+ R +E VK+ L+DL + G +++A ++ +V+W +
Sbjct: 682 AEGCQYFHSLGHDRGIE---VKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWAS 738
Query: 203 MIGGLAMQ 210
++G +Q
Sbjct: 739 LLGACRVQ 746
>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 903
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 195/599 (32%), Positives = 324/599 (54%), Gaps = 25/599 (4%)
Query: 3 IVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
I+ + L ALKF + + + S Y S+L+ C R +HAH + +
Sbjct: 252 IIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSD 311
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+ ++ + T + YAK ++ A+ FD N S+ AMI+GY+Q + ALL+F
Sbjct: 312 FAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFH 371
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
++ SG+ ++ + S RACA ++ L G I G K ++ V +A +D+Y KC
Sbjct: 372 RLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQ 431
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+ +A+ +F+ + R+D VSWNA+I G ++ +LF SM+R ++PD FT GSIL+
Sbjct: 432 ALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILK 491
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
A GG L +IH I+K G+ S++ + SLID+Y+K G I A +++ + +S
Sbjct: 492 ACTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS 550
Query: 301 CT--------------------ALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLM 340
T ++ISG+ + S++A LF M+ + D +
Sbjct: 551 GTMEELEKMHNKRLQEMCVSWNSIISGYVMKE-QSEDAQMLFTRMMEMGITPDKFTYATV 609
Query: 341 LNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNV 400
L+ CAN+AS LG+QIHA K + D + + L+DMY+K G++ D+ F++ ++
Sbjct: 610 LDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDF 669
Query: 401 ISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTD 460
++W ++I GYA HG G EAI+L+++M E + PN VTF+S+L AC+H GL +G E F
Sbjct: 670 VTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYM 729
Query: 461 MINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIY-GNT 519
M Y + P+ H+S +VD+ + G+++ A +IR+M + +W +LG C+I+ N
Sbjct: 730 MKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNV 789
Query: 520 SLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+ E A L ++P+ S Y +LSN+Y AG W+ R+ M L+K PG S+++
Sbjct: 790 EVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVE 848
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 148/556 (26%), Positives = 259/556 (46%), Gaps = 60/556 (10%)
Query: 70 KVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA 129
K+I Y+K D+ A F+ MP R+VVSW +M+SGY QNG ++ VF M R G+
Sbjct: 119 KMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEF 178
Query: 130 NQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILF 189
+ T++ L+ C+ + G I G + + ++ SALLD+YAK ++ +F
Sbjct: 179 DGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVF 238
Query: 190 ERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELM 249
+ I K+ VSW+A+I G + F+ M + S+LR+ EL
Sbjct: 239 QGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELR 298
Query: 250 KISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFA 309
Q+H +K + + + +D+YAK +++ A L+ + + S A+I+G++
Sbjct: 299 LGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYS 358
Query: 310 RDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDA 369
+++ H +A LF ++ +G D++ L + CA V L+ G QI+ A K S D
Sbjct: 359 QEE-HGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDV 417
Query: 370 AVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE 429
V NA IDMY K +A+A R FDEM ++ +SW ++IA + ++G G+E + L+ M
Sbjct: 418 CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS 477
Query: 430 GMVPNDVTFLSLLFACS----------HTGLTCEGWE-------LFTDMINKYRILPRAE 472
+ P++ TF S+L AC+ H+ + G DM +K ++ AE
Sbjct: 478 RIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAE 537
Query: 473 H--------------------------------FSCVVDLFARRGQLESA---YNMIRQM 497
++ ++ + + Q E A + + +M
Sbjct: 538 KIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEM 597
Query: 498 NIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYV--VLSNIYTAAGAWDN 555
I P ++ +L C+ + LG+ + E + V Y+ L ++Y+ G +
Sbjct: 598 GITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDV-YICSTLVDMYSKCGDLHD 656
Query: 556 ARKTRKLMEERSLRKN 571
+R LM E+SLR++
Sbjct: 657 SR----LMFEKSLRRD 668
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 134/510 (26%), Positives = 248/510 (48%), Gaps = 24/510 (4%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
D T+ +L+ C + IH ++ G ++++ ++ ++ YAK + + +
Sbjct: 178 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 237
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F +PE+N VSW+A+I+G QN AL F M + +Q Y+S LR+CA + L
Sbjct: 238 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 297
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G + K F + V++A LD+YAKC ++DA ILF+ E + S+NAMI G
Sbjct: 298 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGY 357
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
+ + + LF +M G+ D +L + RA L + QI+ L IK L
Sbjct: 358 SQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDV 417
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ + ID+Y K ++ A++++ M + D +S A+I+ ++ + F LF M+
Sbjct: 418 CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLF-LFVSMLR 476
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
++ D+ +L C SL G +IH+ K + +++VG +LIDMY+K G I +
Sbjct: 477 SRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEE 535
Query: 388 ANR----------------AFDEMGDKNV----ISWTSLIAGYAKHGYGHEAIELYKKMK 427
A + ++M +K + +SW S+I+GY +A L+ +M
Sbjct: 536 AEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMM 595
Query: 428 HEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQL 487
G+ P+ T+ ++L C++ G ++ +I K + S +VD++++ G L
Sbjct: 596 EMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK-ELQSDVYICSTLVDMYSKCGDL 654
Query: 488 ESAYNMIRQMNIKPTASLWSAILGACSIYG 517
+ M + +++ W+A++ + +G
Sbjct: 655 HDSRLMFEK-SLRRDFVTWNAMICGYAHHG 683
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 190/414 (45%), Gaps = 42/414 (10%)
Query: 134 YSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE 193
+S + CA+ L+ G+ + F FV + LL +Y A ++F+++
Sbjct: 51 FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP 110
Query: 194 RKDVVSWNAMIGGLAMQG--FNDDSFW-----------------------------LFRS 222
+DVVSWN MI G + F +SF+ +F
Sbjct: 111 LRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVD 170
Query: 223 MMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGS 282
M R+G++ D T IL+ + QIH +++++G ++ +L+D+YAK
Sbjct: 171 MGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKR 230
Query: 283 IRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLN 342
+ ++++ + + + +S +A+I+G + +N A FK+M G+ I +L
Sbjct: 231 FVESLRVFQGIPEKNSVSWSAIIAGCVQ-NNLLSLALKFFKEMQKVNAGVSQSIYASVLR 289
Query: 343 ICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVIS 402
CA ++ L LG Q+HA A K + D V A +DMYAK + DA FD + N S
Sbjct: 290 SCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQS 349
Query: 403 WTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI 462
+ ++I GY++ +G +A+ L+ ++ G+ ++++ + AC+ EG +++ I
Sbjct: 350 YNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAI 409
Query: 463 NKYRILPRAEHFSCV----VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
L CV +D++ + L A+ + +M + S W+AI+ A
Sbjct: 410 KSSLSLD-----VCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVS-WNAIIAA 457
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 111/263 (42%), Gaps = 39/263 (14%)
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA------------------- 358
+F F D + + + + CA +L LG+Q HA
Sbjct: 32 SFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQ 91
Query: 359 ------------FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
F D N +I+ Y+KS ++ AN F+ M ++V+SW S+
Sbjct: 92 VYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSM 151
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYR 466
++GY ++G ++IE++ M EG+ + TF +L CS T G ++ ++ +
Sbjct: 152 LSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIH-GIVVRVG 210
Query: 467 ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAA 526
S ++D++A+ + + + + + K + S WSAI+ C +L LA
Sbjct: 211 CDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVS-WSAIIAGCV---QNNLLSLAL 266
Query: 527 RNLFDMEPEKSVNYVVLSNIYTA 549
+ +M+ VN V +IY +
Sbjct: 267 KFFKEMQK---VNAGVSQSIYAS 286
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 199/590 (33%), Positives = 327/590 (55%), Gaps = 21/590 (3%)
Query: 1 MNIVRANFKTGQLKQALKFSLSCPDTL-LDPSTYMSLL----QFCIDKKAERQAHLIHAH 55
+ +VR +F ++A+K + +T+ ++ TY+ LL ++ I ++ R ++H H
Sbjct: 349 VGLVRQDFS----EEAVKIFVGTRNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGH 404
Query: 56 IITNGYES-NLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDEN 114
++ G + +S ++ YAK G + SA K F M + +SW +IS QNG E
Sbjct: 405 MLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEE 464
Query: 115 ALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLD 174
A++ +S M +S + + F S+L +CA ++ L G+ + K + V + L+
Sbjct: 465 AVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVK 524
Query: 175 LYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM-QGFNDDSFWLFRSMMRQGMKPDCF 233
+Y +CG + D W +F + D VSWN M+G +A Q + +F +MMR G+ P+
Sbjct: 525 MYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKV 584
Query: 234 TLGSILRA--SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
T ++L A + +EL K Q+H ++K G+ N + +LI YAK G + S L+
Sbjct: 585 TFINLLAALSPLSVLELGK--QVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFT 642
Query: 292 SML-KTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
+M + D IS ++ISG+ + N +EA D MI +D ++LN CA+VA+L
Sbjct: 643 NMSDRRDAISWNSMISGYIYNGN-LQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAAL 701
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
G ++HAF + D V +AL+DMY+K G + A++ F+ M +N SW S+I+GY
Sbjct: 702 ERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGY 761
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
A+HG G +AIE++++M P+ VTF+S+L ACSH GL G E F +M+ + ILP+
Sbjct: 762 ARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYF-EMMPDHGILPQ 820
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIY---GNTSLGELAAR 527
EH+SCV+DL R G+++ I++M I+P A +W +L AC N LG A+R
Sbjct: 821 IEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASR 880
Query: 528 NLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
L ++EP+ VNYV+ SN + A G W++ K R M + + +K G S++
Sbjct: 881 VLLEIEPQNPVNYVLASNFHAATGMWEDTAKARTAMRQATEKKEAGRSWV 930
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 129/476 (27%), Positives = 228/476 (47%), Gaps = 19/476 (3%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H +I G +L L ++ YAK + +A + FD MPERN VSWT ++SGY +G
Sbjct: 83 LHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGI 142
Query: 112 DENALLVFSAMLR---SGVRANQFTYSSALRACARMRWLQGGRMIQ--GSIQKGRFVENL 166
E A VF AMLR +G R FT+ + LRAC + G +Q G + K + N
Sbjct: 143 AEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNT 202
Query: 167 FVKSALLDLYAKC--GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMM 224
V +AL+ +Y C G A +F+ +D+++WNA++ A +G +F LF+ M
Sbjct: 203 TVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQ 262
Query: 225 RQG----MKPDCFTLGSILRASVGGIELMKI-SQIHDLIIKLGLESSNKLTGSLIDVYAK 279
R ++P T GS++ A+ + Q+ ++K G S + +L+ +A+
Sbjct: 263 RGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFAR 322
Query: 280 YGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF---KDMILKKMGIDDVI 336
+G A ++ S+ + + ++ LI G R D S+EA +F ++ + V+
Sbjct: 323 HGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQD-FSEEAVKIFVGTRNTVDVNADTYVVL 381
Query: 337 LCLMLNICANVASLNLGRQIHAFAFKYQ-SSYDAAVGNALIDMYAKSGEIADANRAFDEM 395
L + + L +GR +H + + AV N L++MYAK G I A++ F M
Sbjct: 382 LSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLM 441
Query: 396 GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGW 455
+ ISW ++I+ ++G EA+ Y M+ + P++ +S L +C+ L G
Sbjct: 442 EATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQ 501
Query: 456 ELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
++ D + K+ + + +V ++ G + + + M S W+ ++G
Sbjct: 502 QVHCDAV-KWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVS-WNTMMG 555
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
N +H K ++D + N L++ YAK +A A++ FDEM ++N +SWT L++GY
Sbjct: 78 NSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGY 137
Query: 411 AKHGYGHEAIELYKKMKHE---GMVPNDVTFLSLLFACSHTG 449
HG EA +++ M E G P TF +LL AC G
Sbjct: 138 VLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGG 179
>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
Length = 869
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 194/573 (33%), Positives = 311/573 (54%), Gaps = 6/573 (1%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K G L++AL + D T+ +L+ C R +HAH++ G+ +
Sbjct: 172 KAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVD 231
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ ++ YAK GDV++ARK FD M + +SW AMI+G+ +NG L +F ML+
Sbjct: 232 VLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDE 291
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
V+ N T +S A + + + + G K F ++ ++L+ +YA G + A
Sbjct: 292 VQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQAR 351
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+F R++ +D +SW AMI G GF D + ++ M + PD T+ S L A
Sbjct: 352 TVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLG 411
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
L ++H+L G S +T +L+++YAK I A ++++ M + D++S +++I+
Sbjct: 412 SLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIA 471
Query: 307 GFARDDNHSK-EAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS 365
GF NH EA F+ M L + + V L CA +L G++IHA +
Sbjct: 472 GFCF--NHRNFEALYYFRHM-LADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGI 528
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKK 425
+Y+ + NALID+Y K G+ A F G K+V+SW +IAG+ HG G A+ + +
Sbjct: 529 AYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQ 588
Query: 426 MKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRG 485
M G P++VTF++LL ACS G+ EGWELF M +KY I+P +H++C+VDL +R G
Sbjct: 589 MVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVG 648
Query: 486 QLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSN 545
QL AYN I +M I P A++W A+L C I+ + LGELAA+ + ++EP + +V+L +
Sbjct: 649 QLTEAYNFINEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLELEPNDAGYHVLLCD 708
Query: 546 IYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+Y AG WD + RK M E+ L + G S+++
Sbjct: 709 LYADAGIWDKLARVRKTMREKGLDHDSGCSWVE 741
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 159/526 (30%), Positives = 261/526 (49%), Gaps = 16/526 (3%)
Query: 4 VRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYES 63
+RA GQL QAL + L D Y++L + C ++A AH
Sbjct: 69 LRALCSHGQLAQAL-WLLESSAEPPDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWF 127
Query: 64 NLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML 123
L L ++ + G+ A + F +MPER+V SW M+ GY + G E AL ++ M+
Sbjct: 128 GLRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMM 187
Query: 124 RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIE 183
+GVR + +T+ LR+C + + GR + + + F E + V +AL+ +YAKCG +
Sbjct: 188 WAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVV 247
Query: 184 DAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV 243
A +F+ + D +SWNAMI G G + LF +M++ ++P+ T+ S+ AS
Sbjct: 248 AARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASG 307
Query: 244 GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTA 303
++ ++H L +K G + SLI +YA G + A ++ M D +S TA
Sbjct: 308 LLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTA 367
Query: 304 LISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY 363
+ISG+ ++ K A +++ M + + DD+ + L CA + SL++G ++H A
Sbjct: 368 MISGYEKNGFPDK-ALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESK 426
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELY 423
V NAL++MYAKS I A F M +K+V+SW+S+IAG+ + EA+ +
Sbjct: 427 GFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYF 486
Query: 424 KKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM----INKYRILPRAEHFSCVVD 479
+ M + + PN VTF++ L AC+ TG G E+ + I LP A ++D
Sbjct: 487 RHMLAD-VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNA-----LID 540
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
L+ + GQ A+ K S W+ ++ +GN GE A
Sbjct: 541 LYVKCGQTGYAWAQFCAHGAKDVVS-WNIMIAGFVAHGN---GETA 582
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 181/592 (30%), Positives = 313/592 (52%), Gaps = 30/592 (5%)
Query: 21 LSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGD 80
L C + D T+ +L C A + +H I+ G+E ++ + +I FY + G+
Sbjct: 130 LMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECGE 189
Query: 81 VLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRA 140
+ R+ FD+M ERNVVSWT++I GYA+ G + A+ +F M+ G+R N T + A
Sbjct: 190 IDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISA 249
Query: 141 CARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSW 200
CA+++ LQ G + I + N + +AL+D+Y KCG I+ A +F+ K++V +
Sbjct: 250 CAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLY 309
Query: 201 NAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIK 260
N ++ QG + + M++ G +PD T+ S + A ++ H +++
Sbjct: 310 NTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLR 369
Query: 261 LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHS----- 315
GLE + + ++I++Y K G A +++ ML +S +LI+GF R+ +
Sbjct: 370 NGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKI 429
Query: 316 -------------------------KEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
KEA +LF+ M + + D V + + + C + +L
Sbjct: 430 FSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGAL 489
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
+L + IH + K +D +G AL+DM+A+ G+ A + F++M ++V +WT+ I
Sbjct: 490 DLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAM 549
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
A G G AIEL+ +M +G+ P+ V F++LL A SH GL +GW +F M + Y I P+
Sbjct: 550 AMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQ 609
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
A H+ C+VDL R G L A ++I M ++P +W ++L AC ++ N + AA +
Sbjct: 610 AVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAERIS 669
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+++PE++ +V+LSNIY +AG WD+ K R ++E+ K PG S ++ + K
Sbjct: 670 ELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLKEKGAHKMPGSSSIEINGK 721
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 140/525 (26%), Positives = 253/525 (48%), Gaps = 58/525 (11%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLS---ARKAFDRMPERNVVSWT-----AMI 103
+H+ I NG + T +I ++G S A+KA + E N + T ++I
Sbjct: 52 LHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQKALELFIEDNGIMGTHYMFSSLI 111
Query: 104 SGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFV 163
G++ G A++VF ++ G + FT+ L AC + L G + G+I K F
Sbjct: 112 RGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFE 171
Query: 164 ENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM 223
++FV+++L+ Y +CG I+ +F+++ ++VVSW ++IGG A +G ++ LF M
Sbjct: 172 RDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEM 231
Query: 224 MRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
+ G++P+ T+ ++ A +L Q+ I +L LE + + +L+D+Y K G+I
Sbjct: 232 VEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAI 291
Query: 284 RSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNI 343
A +++ + +++ ++S + R ++E + +M+ D + + ++
Sbjct: 292 DKARKIFDECVDKNLVLYNTIMSNYVR-QGLAREVLAVLGEMLKHGPRPDRITMLSAVSA 350
Query: 344 CANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISW 403
C+ + ++ G+ H + + V NA+I+MY K G+ A R FD M +K +SW
Sbjct: 351 CSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSW 410
Query: 404 TSLIAGYAKHG-------------------------------YGHEAIELYKKMKHEGMV 432
SLIAG+ ++G EAIEL++ M+ EG+
Sbjct: 411 NSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGIT 470
Query: 433 PNDVTFLSLLFACSHTG-LTCEGWELFTDMINKYRILPRAEHF-----SCVVDLFARRGQ 486
+ VT + + AC + G L W I+ Y I + HF + +VD+FAR G
Sbjct: 471 ADKVTMVGVASACGYLGALDLAKW------IHGY-IKKKDIHFDMHLGTALVDMFARCGD 523
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
+SA + +M +K S W+A +GA ++ GN + A LFD
Sbjct: 524 PQSAMQVFNKM-VKRDVSAWTAAIGAMAMEGNGT----GAIELFD 563
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 179/559 (32%), Positives = 309/559 (55%), Gaps = 9/559 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D +T +++L C ++ + +H + G L ++ +I Y+K + A+ F
Sbjct: 203 DVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLF 262
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLR-----SGVRANQFTYSSALRACAR 143
D+ ++N+VSW +MI GYA+ +E+ F + + + ++A++FT + L C
Sbjct: 263 DKNDKKNIVSWNSMIGGYAR---EEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLE 319
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
LQ + + G + N V +A + Y +CG + + +F+ ++ K V SWNA+
Sbjct: 320 RSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNAL 379
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGL 263
+ G A + L+ M G+ PD FT+GS+L A L +IH ++ GL
Sbjct: 380 LCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGL 439
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
+ SL+ +Y G +A L+ M ++S +I+G++++ EA +LF+
Sbjct: 440 AVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQN-GLPDEAINLFR 498
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
M+ + ++ + + C+ +++L LG+++H FA K + D V +++IDMYAK G
Sbjct: 499 QMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGG 558
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
I + R FD + +K+V SW +IAGY HG G EA+EL++KM G+ P+D TF +L
Sbjct: 559 CIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILM 618
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
ACSH GL +G E F M+N + I P+ EH++CVVD+ R G+++ A +I +M P +
Sbjct: 619 ACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDS 678
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
+WS++L +C I+GN LGE A L ++EPEK NYV++SN++ +G WD+ R+ R M
Sbjct: 679 RIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRM 738
Query: 564 EERSLRKNPGYSFLQSSKK 582
++ L+K+ G S+++ K
Sbjct: 739 KDIGLQKDAGCSWIEVGGK 757
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 152/527 (28%), Positives = 265/527 (50%), Gaps = 40/527 (7%)
Query: 36 LLQFCIDKKAERQAHLIHAHI-ITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
LLQ C +K +H + + + ++ L+T++I Y+ G +R FD++ +
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLR-SGVRANQFTYSSALRACARMRWLQGGRMI 153
N+ W A++S Y +N E+A+ +FS ++ + + + FT ++ACA + L G++I
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 123
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN 213
G K V ++FV +AL+ +Y KCG +E+A +FE + +++VSWN++I G + GF
Sbjct: 124 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFL 183
Query: 214 DDSFWLFRSMM--RQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
+SF FR M+ + PD TL ++L G ++ K +H L +KLGL +
Sbjct: 184 QESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNN 243
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK--K 329
SLID+Y+K + A L+ K +I+S ++I G+AR+++ + F L + M + K
Sbjct: 244 SLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCR-TFYLLQKMQTEDAK 302
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
M D+ + +L +C + L +++H +++++ + V NA I Y + G + +
Sbjct: 303 MKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSE 362
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS--- 446
R FD M K V SW +L+ GYA++ +A++LY +M G+ P+ T SLL ACS
Sbjct: 363 RVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMK 422
Query: 447 --HTGLTCEGWELFT----------DMINKYRILPRA----------EHFSCV-----VD 479
H G G+ L +++ Y + EH S V +
Sbjct: 423 SLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIA 482
Query: 480 LFARRGQLESAYNMIRQM---NIKPTASLWSAILGACSIYGNTSLGE 523
+++ G + A N+ RQM I+P + GACS LG+
Sbjct: 483 GYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGK 529
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 190/581 (32%), Positives = 313/581 (53%), Gaps = 38/581 (6%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYA--KVGDV 81
P LL ++LL C K+ + IH+ II G + +K+I F A G++
Sbjct: 26 PYKLLQNHPSLTLLSTC---KSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNL 82
Query: 82 LSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC 141
A F+ + + N W MI G + + A+ + ML GV N +T+ L++C
Sbjct: 83 SYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSC 142
Query: 142 ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG--------------------- 180
A++ Q G+ I G + K + FV ++L+++YA+ G
Sbjct: 143 AKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFT 202
Query: 181 ----------WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
++DA LFE I +D VSWNAMI G A G +++ F+ M R + P
Sbjct: 203 ALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAP 262
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
+ T+ ++L A L + + I GL S+ +L +LID+Y+K G + A L+
Sbjct: 263 NESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLF 322
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
+ + DIIS +I G++ +++ KEA LF+ M + +DV +L CA + +L
Sbjct: 323 EGICEKDIISWNVMIGGYSHMNSY-KEALALFRKMQQSNVEPNDVTFVSILPACAYLGAL 381
Query: 351 NLGRQIHAFA-FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
+LG+ IHA+ K+ + ++ +LIDMYAK G I A + F M K++ SW ++I+G
Sbjct: 382 DLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISG 441
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
A HG+ + A+EL+++M+ EG P+D+TF+ +L ACSH GL G + F+ M+ Y I P
Sbjct: 442 LAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISP 501
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
+ +H+ C++DL R G + A +++ M +KP ++W ++LGAC ++GN LGE AA++L
Sbjct: 502 KLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHL 561
Query: 530 FDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
F++EPE YV+LSNIY AG WD+ + R + ++ ++K
Sbjct: 562 FELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKK 602
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 183/545 (33%), Positives = 300/545 (55%), Gaps = 5/545 (0%)
Query: 44 KAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPE--RNVVSWTA 101
K+ + A IH+ ++T ++L +++ YAK G + F+ P NVV+WT
Sbjct: 111 KSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTT 170
Query: 102 MISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGR 161
+I+ +++ AL F+ M +G+ N FT+S+ L ACA L G+ I I K
Sbjct: 171 LINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHC 230
Query: 162 FVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFR 221
F+ + FV +ALLD+YAKCG + A +F+ + +++VSWN+MI G + +FR
Sbjct: 231 FLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFR 290
Query: 222 SMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYG 281
++ G PD ++ S+L A G +EL Q+H I+K GL + SL+D+Y K G
Sbjct: 291 EVLSLG--PDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCG 348
Query: 282 SIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLML 341
A +L+ D+++ +I G R N ++A F+ MI + + D+ +
Sbjct: 349 LFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNF-EQACTYFQAMIREGVEPDEASYSSLF 407
Query: 342 NICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVI 401
+ A++A+L G IH+ K ++ + ++L+ MY K G + DA + F E + NV+
Sbjct: 408 HASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVV 467
Query: 402 SWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM 461
WT++I + +HG +EAI+L+++M +EG+VP +TF+S+L ACSHTG +G++ F M
Sbjct: 468 CWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSM 527
Query: 462 INKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSL 521
N + I P EH++C+VDL R G+LE A I M +P + +W A+LGAC + N +
Sbjct: 528 ANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEM 587
Query: 522 GELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSK 581
G A LF +EP+ NY++LSNIY G + A + R+LM +RK G S++
Sbjct: 588 GREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKESGCSWIDVKN 647
Query: 582 KNILL 586
+ +
Sbjct: 648 RTFVF 652
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 132/444 (29%), Positives = 229/444 (51%), Gaps = 28/444 (6%)
Query: 15 QALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVI 72
QAL F T + P+ T+ ++L C + IHA I + + ++ ++T ++
Sbjct: 183 QALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALL 242
Query: 73 IFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQF 132
YAK G +L A FD MP RN+VSW +MI G+ +N A+ VF +L G +Q
Sbjct: 243 DMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLG--PDQV 300
Query: 133 TYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI 192
+ SS L ACA + L G+ + GSI K V ++VK++L+D+Y KCG EDA LF
Sbjct: 301 SISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGG 360
Query: 193 ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS 252
+DVV+WN MI G + + F++M+R+G++PD + S+ AS L + +
Sbjct: 361 GDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGT 420
Query: 253 QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDD 312
IH ++K G +++++ SL+ +Y K GS+ AYQ++R + +++ TA+I+ F
Sbjct: 421 MIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVF-HQH 479
Query: 313 NHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG 372
+ EA LF++M+ + + + + +L+ C++ ++ G FKY +S A V
Sbjct: 480 GCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDG-------FKYFNSM-ANVH 531
Query: 373 N---------ALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHG---YGHEA 419
N ++D+ + G + +A R + M + + + W +L+ KH G E
Sbjct: 532 NIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREV 591
Query: 420 IELYKKMKHEGMVPNDVTFLSLLF 443
E K++ + P + LS ++
Sbjct: 592 AERLFKLEPDN--PGNYMLLSNIY 613
>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 185/548 (33%), Positives = 300/548 (54%), Gaps = 5/548 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T SLL C KA R +HA ++ G +S++ +S V+ YAK G AR+ FD M
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
E+N+VSW+AMISGY Q G + A+ ++S M + N++ ++S + ACA + + G+
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQ 121
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I K + FV ++L+ +Y KC DA +F + VS+NA+I G
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQ 181
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
+ F+ M +QG+ PD F +L L + +++H +KL L+S+ +
Sbjct: 182 QLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGN 241
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK-KM 330
+I +Y++ I+ A + +R + + D+IS LI+ + D+H+K +FK M + +
Sbjct: 242 VIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAK-GLRVFKHMTEETNV 300
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
DD L CA +AS++ G+QIHA + + D VGNAL++MYAK G I A
Sbjct: 301 RPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYD 360
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
F +M N++SW ++IAG+ HG G A+EL+++M G+ P+ VTF+ LL AC+H GL
Sbjct: 361 IFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGL 420
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
+G F M Y I P EHFSC++D+ R G+L A +R+ + ++L
Sbjct: 421 VDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLL 480
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
A ++G+ +GE A+ L ++P + YV+LSN+Y + G WD+ + RK ++ L+K
Sbjct: 481 SASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGLKK 540
Query: 571 NPGYSFLQ 578
PG+S ++
Sbjct: 541 EPGHSLIE 548
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 118/233 (50%), Gaps = 3/233 (1%)
Query: 12 QLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLST 69
QL++ L+F L P +M +L C + ++ +H + +S +
Sbjct: 182 QLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGN 241
Query: 70 KVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML-RSGVR 128
+I Y+++ + A KAF + E++V+SW +I+ + L VF M + VR
Sbjct: 242 VIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVR 301
Query: 129 ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWIL 188
+ FT++SAL ACA + + G+ I + + R ++L V +AL+++YAKCG I A+ +
Sbjct: 302 PDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDI 361
Query: 189 FERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
F ++ ++VSWN +I G G + + LF M G++PD T +L A
Sbjct: 362 FSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTA 414
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 1/158 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ S L C + IHAH++ +L + ++ YAK G + A F
Sbjct: 303 DDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIF 362
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+M N+VSW +I+G+ +G E A+ +F M SG+R + T+ L AC +
Sbjct: 363 SKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVD 422
Query: 149 GGRMIQGSIQKGRFV-ENLFVKSALLDLYAKCGWIEDA 185
G++ S+++ + ++ S L+D+ + G + +A
Sbjct: 423 KGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEA 460
>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 770
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 178/547 (32%), Positives = 296/547 (54%), Gaps = 11/547 (2%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y+ LL CI+ + A +H H++ G ++ ++T ++ Y + G+ AR FD MP
Sbjct: 81 YVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMP 140
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
E+NVV+WTA+I+GY N AL VF ML+ G + +T L AC + G+
Sbjct: 141 EKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQ 200
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM-QG 211
+ G K + ++L LY K G +E F+RI K+V++W MI A +
Sbjct: 201 VHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDEN 260
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
+ + LF M++ + P+ FTL S++ +++ Q+ K+G ++ +
Sbjct: 261 YTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKN 320
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFA------RDDNHSK----EAFDL 321
S + +Y + G A +L+ M +I+ A+ISGFA +DD H++ +A +
Sbjct: 321 STMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKI 380
Query: 322 FKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
F+D++ M D +L++C+ + +L G QIHA K D V +AL++MY K
Sbjct: 381 FRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNK 440
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
G I A +AF EM + +++WTS+I+GY++HG H+AI+L++ M G PN++TF+SL
Sbjct: 441 CGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSL 500
Query: 442 LFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
L ACS+ GL E F M N+Y I P +H+ C++D+F R G+L+ AY I++ +P
Sbjct: 501 LSACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFEP 560
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRK 561
++WS+++ C +GN L AA L +++P+ YV+L N+Y + G W + + RK
Sbjct: 561 NEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVVETYVLLLNMYISTGRWRDVARVRK 620
Query: 562 LMEERSL 568
L + L
Sbjct: 621 LSKHEDL 627
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 210/410 (51%), Gaps = 17/410 (4%)
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
AML+ G Y L C L G + + G + K + ++FV ++L+++Y +CG
Sbjct: 68 AMLKEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCG 127
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+DA LF+ + K+VV+W A+I G + + +F M++ G P +TLG +L
Sbjct: 128 NSQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLS 187
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
A V + Q+H IK G S + SL +Y K G++ S + ++ + ++I+
Sbjct: 188 ACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVIT 247
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
T +IS A D+N+++ +LF DM+ ++ ++ L ++++C +NLG+Q+ F
Sbjct: 248 WTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFC 307
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAK-------- 412
FK + + V N+ + +Y + GE +A R F+EM D +VI+W ++I+G+A+
Sbjct: 308 FKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDD 367
Query: 413 ---HGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
G +A+++++ + M P+ TF S+L CS +G ++ I K L
Sbjct: 368 LHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTI-KTGFLS 426
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL--WSAILGACSIYG 517
S +V+++ + G +E A +M PT +L W++++ S +G
Sbjct: 427 DVVVNSALVNMYNKCGCIEYATKAFVEM---PTRTLVTWTSMISGYSQHG 473
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 192/401 (47%), Gaps = 17/401 (4%)
Query: 30 PSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
PS Y +L C+ +H + I G S + + Y K G++ S +A
Sbjct: 177 PSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRA 236
Query: 88 FDRMPERNVVSWTAMISGYAQN-GYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
F R+P++NV++WT MIS A++ Y E L +F ML+ V N+FT +S + C
Sbjct: 237 FKRIPDKNVITWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLD 296
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
+ G+ +QG K NL VK++ + LY + G E+A LFE +E V++WNAMI G
Sbjct: 297 MNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISG 356
Query: 207 LA--MQGFNDD---------SFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIH 255
A M DD + +FR ++R MKPD FT SIL + L + QIH
Sbjct: 357 FAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIH 416
Query: 256 DLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHS 315
IK G S + +L+++Y K G I A + + M +++ T++ISG+++
Sbjct: 417 AQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQ-HGRP 475
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDAAVGNA 374
+A LF+DMIL +++ +L+ C+ + R +Y
Sbjct: 476 HDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGC 535
Query: 375 LIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHG 414
+IDM+ + G + DA G + N W+SL+AG HG
Sbjct: 536 MIDMFVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHG 576
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 109/209 (52%), Gaps = 6/209 (2%)
Query: 15 QALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVI 72
QALK + + P T+ S+L C A Q IHA I G+ S++ +++ ++
Sbjct: 376 QALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALV 435
Query: 73 IFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQF 132
Y K G + A KAF MP R +V+WT+MISGY+Q+G +A+ +F M+ +G + N+
Sbjct: 436 NMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEI 495
Query: 133 TYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK-SALLDLYAKCGWIEDAWILFER 191
T+ S L AC+ ++ +Q +E L ++D++ + G ++DA+ +R
Sbjct: 496 TFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKR 555
Query: 192 --IERKDVVSWNAMIGGLAMQGFNDDSFW 218
E + + W++++ G G + +F+
Sbjct: 556 KGFEPNEAI-WSSLVAGCRSHGNMELAFY 583
>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 587
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 185/548 (33%), Positives = 300/548 (54%), Gaps = 5/548 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T SLL C KA R +HA ++ G +S++ +S V+ YAK G AR+ FD M
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
E+N+VSW+AMISGY Q G + A+ ++S M + N++ ++S + ACA + + G+
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQ 121
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I K + FV ++L+ +Y KC DA +F + VS+NA+I G
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQ 181
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
+ F+ M +QG+ PD F +L L + +++H +KL L+S+ +
Sbjct: 182 QLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGN 241
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK-KM 330
+I +Y++ I+ A + +R + + D+IS LI+ + D+H+K +FK M + +
Sbjct: 242 VIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAK-GLRVFKHMTEETNV 300
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
DD L CA +AS++ G+QIHA + + D VGNAL++MYAK G I A
Sbjct: 301 RPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYD 360
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
F +M N++SW ++IAG+ HG G A+EL+++M G+ P+ VTF+ LL AC+H GL
Sbjct: 361 IFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGL 420
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
+G F M Y I P EHFSC++D+ R G+L A +R+ + ++L
Sbjct: 421 VDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLL 480
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
A ++G+ +GE A+ L ++P + YV+LSN+Y + G WD+ + RK ++ L+K
Sbjct: 481 SASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGLKK 540
Query: 571 NPGYSFLQ 578
PG+S ++
Sbjct: 541 EPGHSLIE 548
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 118/233 (50%), Gaps = 3/233 (1%)
Query: 12 QLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLST 69
QL++ L+F L P +M +L C + ++ +H + +S +
Sbjct: 182 QLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGN 241
Query: 70 KVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML-RSGVR 128
+I Y+++ + A KAF + E++V+SW +I+ + L VF M + VR
Sbjct: 242 VIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVR 301
Query: 129 ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWIL 188
+ FT++SAL ACA + + G+ I + + R ++L V +AL+++YAKCG I A+ +
Sbjct: 302 PDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDI 361
Query: 189 FERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
F ++ ++VSWN +I G G + + LF M G++PD T +L A
Sbjct: 362 FSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTA 414
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 1/158 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ S L C + IHAH++ +L + ++ YAK G + A F
Sbjct: 303 DDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIF 362
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+M N+VSW +I+G+ +G E A+ +F M SG+R + T+ L AC +
Sbjct: 363 SKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVD 422
Query: 149 GGRMIQGSIQKGRFV-ENLFVKSALLDLYAKCGWIEDA 185
G++ S+++ + ++ S L+D+ + G + +A
Sbjct: 423 KGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEA 460
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 181/551 (32%), Positives = 307/551 (55%), Gaps = 3/551 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
++ T + +LQ C + +HA ++ G E N+ + +++ YA+ G V SA +
Sbjct: 263 MNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQCNA-LLVMYARCGWVDSALRV 321
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F + +++ +SW +M+S Y QN A+ F M+++G + S L A + L
Sbjct: 322 FREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRL 381
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
GR + K R +L + + L+D+Y KC +E + +F+R+ KD VSW +I
Sbjct: 382 INGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACY 441
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A ++ FR+ ++G+K D +GSIL A G + + Q+H I+ GL
Sbjct: 442 AQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGLLDL- 500
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
L +ID+Y + G + A ++ + K DI++ T++++ FA ++ EA LF M+
Sbjct: 501 ILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFA-ENGLLHEAVALFGKMLN 559
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ D V L +L A ++SL G++IH F + + + AV ++L+DMY+ G +
Sbjct: 560 AGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNY 619
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A + FDE K+V+ WT++I HG+G +AI ++K+M G+ P+ V+FL+LL+ACSH
Sbjct: 620 ALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSH 679
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
+ L EG M++KY++ P EH++CVVDL R GQ E AY I+ M ++P + +W
Sbjct: 680 SKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVWC 739
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
A+LGAC I+ N L +A L ++EP+ NYV++SN++ G W+N ++ R M E+
Sbjct: 740 ALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGKWNNVKEIRTKMTEQG 799
Query: 568 LRKNPGYSFLQ 578
LRK+P S+++
Sbjct: 800 LRKDPACSWIE 810
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/506 (27%), Positives = 263/506 (51%), Gaps = 8/506 (1%)
Query: 15 QALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIF 74
+A++ S D T S+L+ C + R +H + +G + + ++ ++
Sbjct: 148 RAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGM 207
Query: 75 YAKVGDVLSARKAFDRMPE-RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFT 133
YAK G + SA + F+ M + R+V SW + ISG QNG AL +F M G N +T
Sbjct: 208 YAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYT 267
Query: 134 YSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE 193
L+ CA + L GR + ++ K N+ +ALL +YA+CGW++ A +F I
Sbjct: 268 TVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQC-NALLVMYARCGWVDSALRVFREIG 326
Query: 194 RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI-ELMKIS 252
KD +SWN+M+ ++ F M++ G PD + S+L A VG + L+
Sbjct: 327 DKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSA-VGHLGRLINGR 385
Query: 253 QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDD 312
++H +K L+S ++ +L+D+Y K S+ + +++ M D +S T +I+ +A+
Sbjct: 386 EVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSS 445
Query: 313 NHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG 372
+S EA F+ + + +D +++ +L C+ + S++L +Q+H++A + D +
Sbjct: 446 RYS-EAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIR-NGLLDLILK 503
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
N +ID+Y + GE+ A F+ + K++++WTS++ +A++G HEA+ L+ KM + G+
Sbjct: 504 NRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQ 563
Query: 433 PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYN 492
P+ V + +L A + +G E+ +I + + S +VD+++ G + A
Sbjct: 564 PDSVALVGILGAIAGLSSLTKGKEIHGFLI-RGKFPVEGAVVSSLVDMYSGCGSMNYALK 622
Query: 493 MIRQMNIKPTASLWSAILGACSIYGN 518
+ + K LW+A++ A ++G+
Sbjct: 623 VFDEAKCKDVV-LWTAMINATGMHGH 647
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 164/607 (27%), Positives = 280/607 (46%), Gaps = 60/607 (9%)
Query: 4 VRANFKTGQLKQALK-FSLSCPDTLLDPST--YMSLLQFCIDKKAERQAHLIHAHIITNG 60
+R K G L++AL+ + P T Y +L ++A + +HAH + G
Sbjct: 26 LRQLCKDGDLREALRQLAARSARGRAPPPTDHYGWVLDLVAVRRAVSEGRQLHAHAVATG 85
Query: 61 Y---ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALL 117
+ L+TK++ Y K G + A + FD MP R V SW A+I +G A+
Sbjct: 86 ALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVG 145
Query: 118 VFSAMLRS----GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALL 173
V+ AM S G + T +S L+AC + G + G K + V +AL+
Sbjct: 146 VYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALV 205
Query: 174 DLYAKCGWIEDAWILFERI-ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDC 232
+YAKCG ++ A +FE + + +DV SWN+ I G G ++ LFR M G +
Sbjct: 206 GMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNS 265
Query: 233 FTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRS 292
+T +L+ +L ++H ++K G E N +L+ +YA+ G + SA +++R
Sbjct: 266 YTTVGVLQVCAELAQLNHGRELHAALLKCGTE-FNIQCNALLVMYARCGWVDSALRVFRE 324
Query: 293 MLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNL 352
+ D IS +++S + ++ ++ EA D F +M+ D + +L+ ++ L
Sbjct: 325 IGDKDYISWNSMLSCYVQNRLYA-EAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLIN 383
Query: 353 GRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAK 412
GR++HA+A K + D + N L+DMY K + + R FD M K+ +SWT++IA YA+
Sbjct: 384 GREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQ 443
Query: 413 HGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS-------------------------- 446
EAI ++ + EG+ + + S+L ACS
Sbjct: 444 SSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGLLDLILK 503
Query: 447 --------HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM- 497
G C +F +M++K I+ ++ +V+ FA G L A + +M
Sbjct: 504 NRIIDIYGECGEVCYALNIF-EMLDKKDIVT----WTSMVNCFAENGLLHEAVALFGKML 558
Query: 498 --NIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLS---NIYTAAGA 552
I+P + ILGA I G +SL + + F + + V V+S ++Y+ G+
Sbjct: 559 NAGIQPDSVALVGILGA--IAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGS 616
Query: 553 WDNARKT 559
+ A K
Sbjct: 617 MNYALKV 623
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 181/535 (33%), Positives = 295/535 (55%), Gaps = 8/535 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IH ++ +G + + + +I Y K G V AR F +M E +++SW MISG +G
Sbjct: 957 IHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGL 1016
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG----RMIQGSIQKGRFVENLF 167
+E ++ +F +LR + +QFT +S LRAC+ L+GG I K V + F
Sbjct: 1017 EECSVGMFVHLLRDSLLPDQFTVASVLRACSS---LEGGYYLATQIHACAMKAGVVLDSF 1073
Query: 168 VKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
V +AL+D+Y+K G +E+A LF + D+ SWNA++ G + G + L+ M G
Sbjct: 1074 VSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESG 1133
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
+ D TL + +A+ G + L + QIH +++K G +T ++D+Y K G + SA
Sbjct: 1134 ERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESAR 1193
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
+++ + D ++ T +ISG ++ + A + M L K+ D+ ++ C+ +
Sbjct: 1194 RVFSEIPSPDDVAWTTMISGCV-ENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLL 1252
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI 407
+L GRQIHA K ++D V +L+DMYAK G I DA F + + SW ++I
Sbjct: 1253 TALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMI 1312
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRI 467
G A+HG EA++ +K MK G++P+ VTF+ +L ACSH+GL E +E F M Y I
Sbjct: 1313 VGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGI 1372
Query: 468 LPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAAR 527
P EH+SC+VD +R G++E A +I M + +AS++ +L AC + + G+ A
Sbjct: 1373 EPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAE 1432
Query: 528 NLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
L +EP S YV+LSN+Y AA W+N R +M + +++K+PG+S++ K
Sbjct: 1433 KLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNK 1487
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 125/473 (26%), Positives = 222/473 (46%), Gaps = 40/473 (8%)
Query: 53 HAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPE--RNVVSWTAMISGYAQNG 110
HA I+T+G+ + ++ +I YAK G + SARK FD P+ R++V+W A++S A +
Sbjct: 679 HARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSALAAHA 738
Query: 111 -YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK 169
+ +F + RS V + T + + C + G K ++FV
Sbjct: 739 DKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVA 798
Query: 170 SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
AL+++YAK G I +A +LF+ + +DVV WN M+ ++ LF R G +
Sbjct: 799 GALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFR 858
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
PD TL ++ R ++++ Q KL + Y GS
Sbjct: 859 PDDVTLRTLSRVVKCKKNILELKQFKAYATKLFM-------------YDDDGS------- 898
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
D+I +S F + + EA D F DMI ++ D + +ML + A +
Sbjct: 899 -------DVIVWNKALSRFLQR-GEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNC 950
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
L LG+QIH + +VGN LI+MY K+G ++ A F +M + ++ISW ++I+G
Sbjct: 951 LELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISG 1010
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMIN----KY 465
G ++ ++ + + ++P+ T S+L ACS + EG I+ K
Sbjct: 1011 CTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACS----SLEGGYYLATQIHACAMKA 1066
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
++ + + ++D++++RG++E A + + AS W+AI+ + G+
Sbjct: 1067 GVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLAS-WNAIMHGYIVSGD 1118
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 140/248 (56%), Gaps = 1/248 (0%)
Query: 47 RQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGY 106
+Q IHA ++ G+ +L +++ V+ Y K G++ SAR+ F +P + V+WT MISG
Sbjct: 1155 KQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGC 1214
Query: 107 AQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENL 166
+NG +E+AL + M S V+ +++T+++ ++AC+ + L+ GR I +I K +
Sbjct: 1215 VENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDP 1274
Query: 167 FVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ 226
FV ++L+D+YAKCG IEDA LF+R + + SWNAMI GLA G ++ F+ M +
Sbjct: 1275 FVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSR 1334
Query: 227 GMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRS 285
G+ PD T +L A S G+ + + G+E + L+D ++ G I
Sbjct: 1335 GVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEE 1394
Query: 286 AYQLYRSM 293
A ++ SM
Sbjct: 1395 AEKVISSM 1402
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 114/486 (23%), Positives = 218/486 (44%), Gaps = 37/486 (7%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T + + C+ + + +H + + G + ++ ++ ++ YAK G + AR FD M
Sbjct: 762 TLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGM 821
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
R+VV W M+ Y + A+L+FS R+G R + T LR +R+ ++ +
Sbjct: 822 AVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVT----LRTLSRV--VKCKK 875
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I Q + LF +Y G DV+ WN + +G
Sbjct: 876 NILELKQFKAYATKLF-------MYDDDG--------------SDVIVWNKALSRFLQRG 914
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI-SQIHDLIIKLGLESSNKLT 270
++ F M+ + D T +L V G+ +++ QIH ++++ GL+ +
Sbjct: 915 EAWEAVDCFVDMINSRVACDGLTFVVMLTV-VAGLNCLELGKQIHGIVMRSGLDQVVSVG 973
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
LI++Y K GS+ A ++ M + D+IS +ISG + + +F ++ +
Sbjct: 974 NCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTL-SGLEECSVGMFVHLLRDSL 1032
Query: 331 GIDDVILCLMLNICANV-ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
D + +L C+++ L QIHA A K D+ V ALID+Y+K G++ +A
Sbjct: 1033 LPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAE 1092
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
F ++ SW +++ GY G +A+ LY M+ G + +T ++ A
Sbjct: 1093 FLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLV 1152
Query: 450 LTCEGWELFTDMINKYRILPRAEHF--SCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
+G ++ ++ + L + F S V+D++ + G++ESA + ++ P W+
Sbjct: 1153 GLKQGKQIHAVVVKRGFNL---DLFVTSGVLDMYLKCGEMESARRVFSEIP-SPDDVAWT 1208
Query: 508 AILGAC 513
++ C
Sbjct: 1209 TMISGC 1214
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 5/214 (2%)
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
P CF SILR ++ +L + H I+ G +T +LI +YAK GS+ SA +L
Sbjct: 657 PQCF---SILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKL 713
Query: 290 YRSMLKT--DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
+ + T D+++ A++S A + S + F LF+ + + L + +C
Sbjct: 714 FDTTPDTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLS 773
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI 407
AS + +H +A K +D V AL+++YAK G I +A FD M ++V+ W ++
Sbjct: 774 ASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMM 833
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
Y +EA+ L+ + G P+DVT +L
Sbjct: 834 KAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTL 867
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 165/386 (42%), Gaps = 35/386 (9%)
Query: 136 SALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE-- 193
S LR L G+ I + FV + L+ +YAKCG + A LF+
Sbjct: 661 SILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDT 720
Query: 194 RKDVVSWNAMIGGLAMQG-FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS 252
+D+V+WNA++ LA + D F LFR + R + TL + + +
Sbjct: 721 NRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASE 780
Query: 253 QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDD 312
+H +K+GL+ + G+L+++YAK+G IR A L+ M D++ ++ + D
Sbjct: 781 SLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYV-DT 839
Query: 313 NHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG 372
EA LF + DDV L + + ++ +Q A+A K
Sbjct: 840 CLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATK---------- 889
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
+ MY G +VI W ++ + + G EA++ + M + +
Sbjct: 890 ---LFMYDDDG--------------SDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVA 932
Query: 433 PNDVTFLSLLFACSHTGLTC-EGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAY 491
+ +TF+ +L + GL C E + ++ + + +C+++++ + G + A
Sbjct: 933 CDGLTFVVMLTVVA--GLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRAR 990
Query: 492 NMIRQMNIKPTASLWSAILGACSIYG 517
++ QMN S W+ ++ C++ G
Sbjct: 991 SVFGQMNEVDLIS-WNTMISGCTLSG 1015
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 77/158 (48%), Gaps = 1/158 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ +L++ C A Q IHA+I+ + + T ++ YAK G++ AR F
Sbjct: 1238 DEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLF 1297
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
R R + SW AMI G AQ+G + AL F M GV ++ T+ L AC+ +
Sbjct: 1298 KRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVS 1357
Query: 149 GGRMIQGSIQKGRFVE-NLFVKSALLDLYAKCGWIEDA 185
S+QK +E + S L+D ++ G IE+A
Sbjct: 1358 EAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEA 1395
>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 861
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 194/599 (32%), Positives = 327/599 (54%), Gaps = 25/599 (4%)
Query: 3 IVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
I+ + L ALKF + + + S Y S+L+ C R +HAH + +
Sbjct: 210 IIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSD 269
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+ ++ + T + YAK ++ A+ FD+ N S+ AMI+GY+Q + ALL+F
Sbjct: 270 FAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFH 329
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
++ SG+ ++ + S RACA ++ L G I K ++ V +A +D+Y KC
Sbjct: 330 RLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQ 389
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+ +A+ +F+ + R+D VSWNA+I G ++ +LF SM+R ++PD FT GS+L+
Sbjct: 390 ALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLK 449
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY-RSMLKTDI- 298
A GG L +IH I+K G+ S++ + SLID+Y+K G I A +++ R +T++
Sbjct: 450 ACTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVS 508
Query: 299 ------------------ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLM 340
+S ++ISG+ + S++A LF M+ + D +
Sbjct: 509 GTMEELEKMHNKRLQEMCVSWNSIISGYVMKE-QSEDAQMLFTRMMEMGITPDKFTYATV 567
Query: 341 LNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNV 400
L+ CAN+AS LG+QIHA K + D + + L+DMY+K G++ D+ F++ ++
Sbjct: 568 LDTCANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRRDF 627
Query: 401 ISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTD 460
++W ++I GYA HG G EAI+L+++M E + PN VTF+S+L AC+H GL +G E F
Sbjct: 628 VTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYM 687
Query: 461 MINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIY-GNT 519
M Y + P+ H+S +VD+ + G+++ A +IR+M + +W +LG C+I+ N
Sbjct: 688 MKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNV 747
Query: 520 SLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+ E A L ++P+ S Y +LSN+Y AG W+ R+ M L+K PG S+++
Sbjct: 748 EVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVE 806
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 148/556 (26%), Positives = 259/556 (46%), Gaps = 60/556 (10%)
Query: 70 KVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA 129
K+I YAK +++ A F+ MP R+VVSW +M+SGY QNG ++ VF M R+G
Sbjct: 77 KMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTEF 136
Query: 130 NQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILF 189
+ T++ L+ C+ + G I G + + ++ SALLD+YAK ++ +F
Sbjct: 137 DGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVF 196
Query: 190 ERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELM 249
+ I K+ VSW+A+I G + F+ M + S+LR+ EL
Sbjct: 197 QGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELR 256
Query: 250 KISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFA 309
Q+H +K + + + +D+YAK +++ A L+ + S A+I+G++
Sbjct: 257 LGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYS 316
Query: 310 RDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDA 369
+++ H +A LF ++ +G D++ L + CA V L+ G QI+ A K S D
Sbjct: 317 QEE-HGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDV 375
Query: 370 AVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE 429
V NA IDMY K +A+A R FDEM ++ +SW ++IA + ++G G+E + L+ M
Sbjct: 376 CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS 435
Query: 430 GMVPNDVTFLSLLFACS----------HTGLTCEGWE-------LFTDMINKYRILPRAE 472
+ P++ TF S+L AC+ H+ + G DM +K ++ AE
Sbjct: 436 RIEPDEFTFGSVLKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAE 495
Query: 473 H--------------------------------FSCVVDLFARRGQLESA---YNMIRQM 497
++ ++ + + Q E A + + +M
Sbjct: 496 KIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEM 555
Query: 498 NIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYV--VLSNIYTAAGAWDN 555
I P ++ +L C+ + LG+ + E + V Y+ L ++Y+ G +
Sbjct: 556 GITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDV-YISSTLVDMYSKCGDLHD 614
Query: 556 ARKTRKLMEERSLRKN 571
+R LM E+SLR++
Sbjct: 615 SR----LMFEKSLRRD 626
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 136/512 (26%), Positives = 251/512 (49%), Gaps = 24/512 (4%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
T D T+ +L+ C + IH ++ G ++++ ++ ++ YAK + +
Sbjct: 134 TEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESL 193
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
+ F +PE+N VSW+A+I+G QN AL F M + +Q Y+S LR+CA +
Sbjct: 194 RVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALS 253
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
L+ G + K F + V++A LD+YAKC ++DA ILF++ E + S+NAMI
Sbjct: 254 ELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMIT 313
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
G + + + LF +M G+ D +L + RA L + QI+DL IK L
Sbjct: 314 GYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSL 373
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ + ID+Y K ++ A++++ M + D +S A+I+ ++ + F LF M
Sbjct: 374 DVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLF-LFVSM 432
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ ++ D+ +L C SL G +IH+ K + +++VG +LIDMY+K G I
Sbjct: 433 LRSRIEPDEFTFGSVLKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMI 491
Query: 386 ADANR----------------AFDEMGDKNV----ISWTSLIAGYAKHGYGHEAIELYKK 425
+A + ++M +K + +SW S+I+GY +A L+ +
Sbjct: 492 EEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTR 551
Query: 426 MKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRG 485
M G+ P+ T+ ++L C++ G ++ +I K + S +VD++++ G
Sbjct: 552 MMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK-ELQSDVYISSTLVDMYSKCG 610
Query: 486 QLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
L + M + +++ W+A++ + +G
Sbjct: 611 DLHDSRLMFEK-SLRRDFVTWNAMICGYAHHG 641
>gi|409032180|gb|AFV08644.1| EMP5 [Zea mays]
gi|409032182|gb|AFV08645.1| EMP5 [Zea mays]
gi|414878626|tpg|DAA55757.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 776
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 195/567 (34%), Positives = 313/567 (55%), Gaps = 14/567 (2%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
++D TY + L C R +HA ++ G + L LS V YA+ G++ AR+
Sbjct: 99 VVDRFTYAAALAACSRALDVRTGKAVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARR 158
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FD ER+ VSW A++SGY + G E L VFS M R G+ N F S ++ CA
Sbjct: 159 VFDAAEERDDVSWNALLSGYVRAGAREETLEVFSLMCRHGLGWNSFALGSIIKCCASSSS 218
Query: 147 ------LQGGRM---IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDV 197
+ GGR+ + G + K +LF+ SA++D+YAK G + +A LF+ + +V
Sbjct: 219 YAAAGDVGGGRIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNV 278
Query: 198 VSWNAMIGGLAMQGFND---DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQI 254
+ NAMI G + D ++ L+ + +GM+P F+ SILRA E QI
Sbjct: 279 IVLNAMIAGFCREEAADVAREALGLYSELQSRGMQPSEFSFSSILRACNLAGEFGFGKQI 338
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH 314
H ++K + + +LID+Y+ G + Y+ +RS+ K D++ T++ISG +++
Sbjct: 339 HGQVLKHSFQGDVYIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELF 398
Query: 315 SKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNA 374
+EA LF++ + + D + ++N CA++A G QI A K + A+GN+
Sbjct: 399 -EEALRLFQESVRCGLRPDVFAMSSVMNACASLAVARTGEQIQCLAVKSGFNRFTAMGNS 457
Query: 375 LIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP- 433
I M A+SG++ A R F EM ++V+SW+++I+ +A HG +A+ ++ +M + P
Sbjct: 458 FIHMCARSGDVDAATRRFQEMESRDVVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPP 517
Query: 434 NDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNM 493
N++TFLS+L ACSH GL EG + M ++Y + P +H +CVVDL R G+L A
Sbjct: 518 NEITFLSILTACSHGGLVDEGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAF 577
Query: 494 IRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAW 553
IR A +W ++L +C I+G+ G+L A + D+EP S +YV+L N+Y AG
Sbjct: 578 IRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADKIMDLEPTSSASYVILYNMYLDAGEL 637
Query: 554 DNARKTRKLMEERSLRKNPGYSFLQSS 580
+A KTR LM+ER ++K PG S+++ S
Sbjct: 638 SSASKTRDLMKERGVKKEPGLSWIELS 664
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 149/562 (26%), Positives = 277/562 (49%), Gaps = 48/562 (8%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAK--VGDVLSARKAFDR 90
Y+ LL+ C A +HAH+ ++L L ++ Y + VG L A + D
Sbjct: 5 YLHLLRSC---AALPHVAAVHAHLARAHPNASLFLRNCLLASYCRLGVGAPLHAARLLDE 61
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA-NQFTYSSALRACARMRWLQG 149
MP RN VS+ +I Y++ G +L F A R+ R ++FTY++AL AC+R ++
Sbjct: 62 MPRRNAVSYNLVIVAYSRAGLPALSLATF-ARARAWARVVDRFTYAAALAACSRALDVRT 120
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
G+ + + G LF+ +++ +YA+CG + +A +F+ E +D VSWNA++ G
Sbjct: 121 GKAVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSWNALLSGYVR 180
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILR-----------ASVGGIELMKISQIHDLI 258
G +++ +F M R G+ + F LGSI++ VGG + + +H +
Sbjct: 181 AGAREETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRIAE--AVHGCV 238
Query: 259 IKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDD--NHSK 316
+K GL++ L ++ID+YAK G++ +A L++S+ ++I A+I+GF R++ + ++
Sbjct: 239 VKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGFCREEAADVAR 298
Query: 317 EAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALI 376
EA L+ ++ + M + +L C G+QIH K+ D +G+ALI
Sbjct: 299 EALGLYSELQSRGMQPSEFSFSSILRACNLAGEFGFGKQIHGQVLKHSFQGDVYIGSALI 358
Query: 377 DMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDV 436
D+Y+ SG + D R F + ++V+ WTS+I+G ++ EA+ L+++ G+ P+
Sbjct: 359 DLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFEEALRLFQESVRCGLRPDVF 418
Query: 437 TFLSLLFAC-----SHTG--LTC----EGWELFTDMINKYRILPRAEHFSCVVDLFARRG 485
S++ AC + TG + C G+ FT M N + + + AR G
Sbjct: 419 AMSSVMNACASLAVARTGEQIQCLAVKSGFNRFTAMGNSF------------IHMCARSG 466
Query: 486 QLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD--MEPEKSVNYVVL 543
+++A ++M + S WSA++ + + +G + D + P + ++ +
Sbjct: 467 DVDAATRRFQEMESRDVVS-WSAVISSHAHHGCARDALCVFNEMLDAKVAPPNEITFLSI 525
Query: 544 SNIYTAAGAWDNARKTRKLMEE 565
+ G D + +M +
Sbjct: 526 LTACSHGGLVDEGLRYYGIMND 547
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 200/559 (35%), Positives = 310/559 (55%), Gaps = 10/559 (1%)
Query: 28 LDPSTYMSLL----QFCIDKKAERQAHLIHAHIITNG-YESNLHLSTKVIIFYAKVGDVL 82
++ S+Y LL +F K+ +R+ +HA++I N + + + ++ YAK +
Sbjct: 348 INASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAID 407
Query: 83 SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA 142
+AR F MP ++ VSW ++ISG N E A+ F M R+G+ ++F+ S L +CA
Sbjct: 408 NARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCA 467
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
+ W+ G+ I G K ++ V +ALL LYA+ +E+ +F + D VSWN+
Sbjct: 468 SLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNS 527
Query: 203 MIGGLAM-QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKL 261
IG LA + + F MM+ G KP+ T +IL A L QIH LI+K
Sbjct: 528 FIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKH 587
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML-KTDIISCTALISGFARDDNHSKEAFD 320
+ N + +L+ Y K + ++ M + D +S A+ISG+ + K A
Sbjct: 588 SVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHK-AMG 646
Query: 321 LFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYA 380
L M+ K +DD L +L+ CA+VA+L G ++HA A + + VG+AL+DMYA
Sbjct: 647 LVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYA 706
Query: 381 KSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
K G+I A+R F+ M +N+ SW S+I+GYA+HG+G +A++L+ +MK G +P+ VTF+
Sbjct: 707 KCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVG 766
Query: 441 LLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIK 500
+L ACSH GL EG+E F M Y + PR EHFSC+VDL R G ++ I+ M +
Sbjct: 767 VLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMPMN 826
Query: 501 PTASLWSAILGACSIYG--NTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARK 558
P A +W ILGAC NT LG AA+ L ++EP +VNYV+LSN++ A G W++ +
Sbjct: 827 PNALIWRTILGACCRANSRNTELGRRAAKMLIELEPLNAVNYVLLSNMHAAGGKWEDVEE 886
Query: 559 TRKLMEERSLRKNPGYSFL 577
R M ++K G S++
Sbjct: 887 ARLAMRNAEVKKEAGCSWV 905
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 124/436 (28%), Positives = 226/436 (51%), Gaps = 18/436 (4%)
Query: 42 DKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTA 101
D AH +H I G S++ ++ + + G+++SA+K FD MP++N+VSW+
Sbjct: 51 DSCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSC 110
Query: 102 MISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM--RWLQGGRMIQGSIQK 159
++SGYAQNG + A ++F ++ +G+ N + SALRAC + L+ G I G I K
Sbjct: 111 LVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISK 170
Query: 160 GRFVENLFVKSALLDLYAKC-GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFW 218
+ ++ + + L+ +Y+ C I+DA +FE I+ K SWN++I +G +F
Sbjct: 171 SPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFK 230
Query: 219 LFRSMMRQGMKPDC----FTLGSILRASVGGIE--LMKISQIHDLIIKLGLESSNKLTGS 272
LF SM R+ + +C +T S++ + ++ L + Q+ I K + +
Sbjct: 231 LFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSA 290
Query: 273 LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI 332
L+ +A+YG I SA ++ M + ++ L+ G AR + +EA +FK+M + I
Sbjct: 291 LVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLAR-QHQGEEAAKIFKEM-KDLVEI 348
Query: 333 DDVILCLMLNICANVASLNLGR----QIHAFAFKYQSSYDA--AVGNALIDMYAKSGEIA 386
+ ++L+ ++L G+ ++HA+ + + D +GNAL+++YAK I
Sbjct: 349 NASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIR-NALVDVWILIGNALVNLYAKCNAID 407
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
+A F M K+ +SW S+I+G + EA+ + M+ GMVP+ + +S L +C+
Sbjct: 408 NARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCA 467
Query: 447 HTGLTCEGWELFTDMI 462
G G ++ + I
Sbjct: 468 SLGWIMLGQQIHGEGI 483
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 149/316 (47%), Gaps = 34/316 (10%)
Query: 253 QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDD 312
Q+H I K GL S +L++++ + G++ SA +L+ M + +++S + L+SG+A++
Sbjct: 60 QLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQN- 118
Query: 313 NHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS--LNLGRQIHAFAFKYQSSYDAA 370
EA LF+ +I + + + L C + L LG +IH K + D
Sbjct: 119 GMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMV 178
Query: 371 VGNALIDMYAK-SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE 429
+ N L+ MY+ S I DA R F+E+ K SW S+I+ Y + G A +L+ M+ E
Sbjct: 179 LSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQRE 238
Query: 430 GMV----PNDVTFLSLL-FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDL---- 480
PN+ TF SL+ ACS L G L M L R E S V DL
Sbjct: 239 ATELNCRPNEYTFCSLVTVACS---LVDCGLTLLEQM------LARIEKSSFVKDLYVGS 289
Query: 481 -----FARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPE 535
FAR G ++SA + QM+ + ++ ++G GE AA+ +M+
Sbjct: 290 ALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVG----LARQHQGEEAAKIFKEMKDL 345
Query: 536 KSVN---YVVLSNIYT 548
+N Y VL + +T
Sbjct: 346 VEINASSYAVLLSAFT 361
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 186/527 (35%), Positives = 289/527 (54%), Gaps = 1/527 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HA G++ N + + +I Y+ G V AR+ FD + ++ V+WTAM+S Y++N
Sbjct: 553 VHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDC 612
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
EN L +FS M + + N F +S LRA + + G+ I K + V A
Sbjct: 613 PENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGA 672
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
LLD+YAKCG IEDA + FE + DV+ W+ MI A N+ +F LF MMR + P+
Sbjct: 673 LLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPN 732
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
F+L S+L+A L QIH+ IK+G ES + +LID+YAK + S+ +++
Sbjct: 733 EFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFS 792
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
S+ + +S +I G+++ + A +F++M + V +L CA+ AS+N
Sbjct: 793 SLRDVNEVSWNTIIVGYSKS-GFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASIN 851
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
Q+H K + D V N+LID YAK G I DA F+ + + +++SW ++I+GYA
Sbjct: 852 HVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYA 911
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
HG A EL+ M + ND+TF++LL C TGL +G LF M + I P
Sbjct: 912 VHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSM 971
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
EH++C+V L R G+L A N I + P+A +W A+L +C ++ N LG +A + +
Sbjct: 972 EHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVELGRFSAEKVLE 1031
Query: 532 MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+EP+ YV+LSN+Y+AAG+ D RK M +RK PG S+++
Sbjct: 1032 IEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEPGLSWVE 1078
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 156/521 (29%), Positives = 266/521 (51%), Gaps = 9/521 (1%)
Query: 20 SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIF--YAK 77
SL+ P +D Y LLQ C+ + R +H H++ +G + L L ++ Y K
Sbjct: 418 SLAFPWPGVDSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTK 477
Query: 78 VGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSA 137
VG SA + FD +PERN+VS+ ++ G+A G E A +F + G NQF ++
Sbjct: 478 VGPFGSAHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTV 537
Query: 138 LRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDV 197
L+ M L + K N FV SAL+D Y+ CG + DA +F+ I KD
Sbjct: 538 LKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDA 597
Query: 198 VSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDL 257
V+W AM+ + +++ +F M K + F L S+LRA+V ++ IH
Sbjct: 598 VAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHAC 657
Query: 258 IIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKE 317
+K ++ + G+L+D+YAK G+I A + + D+I + +IS +A+ N +++
Sbjct: 658 SVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQ-CNQNEQ 716
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
AF+LF M+ + ++ L +L CAN+ L+LG+QIH A K + VGNALID
Sbjct: 717 AFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALID 776
Query: 378 MYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVT 437
+YAK ++ + F + D N +SW ++I GY+K G+G A+ ++++M+ + VT
Sbjct: 777 LYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVT 836
Query: 438 FLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
+ S+L AC+ T ++ +I K + ++D +A+ G + A + +
Sbjct: 837 YSSVLRACASTASINHVGQVHC-LIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETL 895
Query: 498 NIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSV 538
S W+AI+ +++G ++ A+ LFDM + S+
Sbjct: 896 KECDLVS-WNAIISGYAVHGQAAM----AQELFDMMSKNSI 931
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 220/450 (48%), Gaps = 16/450 (3%)
Query: 130 NQFTYSSALRACARMRWLQGGRMIQGSIQK--GRFVENLFVKSALLDLYAKCGWIEDAWI 187
+ + Y+ L+ C +GGR + G + + G +LF + LL++Y K G A
Sbjct: 427 DSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHR 486
Query: 188 LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIE 247
+F+ + +++VS+ ++ G A++G +++ LF+ + +G + + F L ++L+ V
Sbjct: 487 VFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDT 546
Query: 248 LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG 307
L +H KLG + + + +LID Y+ G + A +++ ++ D ++ TA++S
Sbjct: 547 LGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSC 606
Query: 308 FARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSY 367
++ +D + +F M + ++ L +L ++S+ LG+ IHA + K
Sbjct: 607 YSENDC-PENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDT 665
Query: 368 DAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMK 427
+ V AL+DMYAK G I DA AF+ + + +VI W+ +I+ YA+ +A EL+ +M
Sbjct: 666 ERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMM 725
Query: 428 HEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF--SCVVDLFARRG 485
+ PN+ + S+L AC++ L G ++ I +I +E F + ++DL+A+
Sbjct: 726 RSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAI---KIGHESELFVGNALIDLYAKCS 782
Query: 486 QLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDME----PEKSVNYV 541
+ES+ + + S + I+G Y + GE A +M P V Y
Sbjct: 783 DMESSLEIFSSLRDVNEVSWNTIIVG----YSKSGFGEAALSVFREMRAASVPSTQVTYS 838
Query: 542 VLSNIYTAAGAWDNARKTRKLMEERSLRKN 571
+ + + ++ + L+E+ + +
Sbjct: 839 SVLRACASTASINHVGQVHCLIEKSTFNSD 868
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 142/281 (50%), Gaps = 3/281 (1%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ Q +QA + + + + P+ + S+LQ C + IH H I G+ES L
Sbjct: 710 QCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELF 769
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ +I YAK D+ S+ + F + + N VSW +I GY+++G+ E AL VF M +
Sbjct: 770 VGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAAS 829
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
V + Q TYSS LRACA + + I+K F + V ++L+D YAKCG I DA
Sbjct: 830 VPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAR 889
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGG 245
+FE ++ D+VSWNA+I G A+ G + LF M + +K + T ++L G
Sbjct: 890 EIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTG 949
Query: 246 IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSA 286
+ +S + + G+E S + ++ + + G + A
Sbjct: 950 LVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDA 990
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 184/577 (31%), Positives = 315/577 (54%), Gaps = 4/577 (0%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ Q ++A + +DP + +LL + + + +H+H+I GY+S L
Sbjct: 175 QNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLV 234
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+S ++ Y K + A + F+ +PER+ V++ A+++GY++ G++ A+ +F M G
Sbjct: 235 VSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVG 294
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
R +FT+++ L A ++ ++ G+ + G + K FV N+FV +ALLD Y+K + +A
Sbjct: 295 YRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEAS 354
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
LF + D +S+N ++ A G +S LF+ + G F ++L + +
Sbjct: 355 KLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISL 414
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
L QIH I S + SL+D+YAK G A +++ + + TA+IS
Sbjct: 415 NLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMIS 474
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
+ + H ++ LF +M K+G D ++ CA++ASL LG+Q+H+
Sbjct: 475 SYVQKGLH-EDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYI 533
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
+ G+AL+DMYAK G I DA + F EM +N +SW +LI+ YA++G G + L+++M
Sbjct: 534 SNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEM 593
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
G+ P+ V+ LS+L ACSH GL EG + F M Y+++P+ EH++ +D+ R G+
Sbjct: 594 VRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGR 653
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEP-EKSVNYVVLSN 545
+ A ++ QM +P +WS++L +C I+ N L + AA LF+M+ + YV +SN
Sbjct: 654 FDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSN 713
Query: 546 IYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
IY AAG WDN K +K M ER ++K P YS+++ K
Sbjct: 714 IYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHK 750
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 146/522 (27%), Positives = 259/522 (49%), Gaps = 14/522 (2%)
Query: 14 KQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVII 73
K L S T +P+TY S F + +R + N+ + +I+
Sbjct: 83 KPHLHVDASIIKTGFNPNTYRS--NFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIM 140
Query: 74 FYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFT 133
Y K G++ AR FD M +R V+WT +I GYAQN A +F M R G+ + +
Sbjct: 141 GYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVS 200
Query: 134 YSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE 193
++ L + R + + K + L V ++LLD Y K + A+ LF I
Sbjct: 201 LATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIP 260
Query: 194 RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS- 252
+D V++NA++ G + +GFN ++ LF M G +P FT +IL A GI+L I
Sbjct: 261 ERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTA---GIQLDDIEF 317
Query: 253 --QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR 310
Q+H ++K + + +L+D Y+K+ + A +L+ M + D IS L++ +A
Sbjct: 318 GQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAW 377
Query: 311 DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA 370
+ KE+ +LFK++ + +L+I A +L++GRQIH+ + +
Sbjct: 378 -NGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEIL 436
Query: 371 VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG 430
VGN+L+DMYAK GE +ANR F ++ ++ + WT++I+ Y + G + ++L+ +M+
Sbjct: 437 VGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAK 496
Query: 431 MVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA 490
+ + T+ S++ AC+ G +L + +I I S +VD++A+ G ++ A
Sbjct: 497 IGADAATYASIVRACASLASLTLGKQLHSHIIGSGYI-SNVFSGSALVDMYAKCGSIKDA 555
Query: 491 YNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDM 532
M ++M ++ + S W+A++ A Y G+ R +M
Sbjct: 556 LQMFQEMPVRNSVS-WNALISA---YAQNGDGDCTLRLFEEM 593
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 198/561 (35%), Positives = 309/561 (55%), Gaps = 13/561 (2%)
Query: 28 LDPSTYMSLL----QFCIDKKAERQAHLIHAHIITNGYESN-LHLSTKVIIFYAKVGDVL 82
++ +Y+ LL +F + ++ R+ +HAH+I G N + + ++ YAK G +
Sbjct: 853 INSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIA 912
Query: 83 SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA 142
A F+ M E++ VSW ++ISG QN E+A F M R+G + FT S L +CA
Sbjct: 913 DACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCA 972
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
+ W+ G I K ++ V +ALL LYA+ G + +F + D VSWN+
Sbjct: 973 SLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNS 1032
Query: 203 MIGGLA-MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS-QIHDLIIK 260
+IG L+ + + F MMR G T +IL A V + L ++S QIH L++K
Sbjct: 1033 VIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSA-VSSLSLHEVSHQIHALVLK 1091
Query: 261 LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT-DIISCTALISGFARDDNHSKEAF 319
L + +L+ Y K G + +++ M +T D +S ++ISG+ ++ K A
Sbjct: 1092 YCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHK-AM 1150
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMY 379
DL M+ K +D +L+ CA+VA+L G ++HA + D VG+AL+DMY
Sbjct: 1151 DLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMY 1210
Query: 380 AKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVT-F 438
+K G I A+R F+ M +NV SW S+I+GYA+HG+G +A++L+ +M +G P+ V
Sbjct: 1211 SKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPL 1270
Query: 439 LSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMN 498
L +L ACSH G EG+E F M YR+ PR EHFSC+VDL R G+L+ + I M
Sbjct: 1271 LGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMP 1330
Query: 499 IKPTASLWSAILGACSIYG--NTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNA 556
+KP +W +LGAC NT LG AA L ++EP+ +VNYV+L+N+Y + W++
Sbjct: 1331 MKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDV 1390
Query: 557 RKTRKLMEERSLRKNPGYSFL 577
K R M+E +++K G S++
Sbjct: 1391 AKARXAMKEAAVKKEAGCSWV 1411
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 148/509 (29%), Positives = 255/509 (50%), Gaps = 23/509 (4%)
Query: 23 CPDTLLDPS-TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDV 81
C TL S T+ SL+ +A +H I G+ NL LS +I Y ++GD+
Sbjct: 536 CNTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDL 595
Query: 82 LSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC 141
SA+K FD M RN+V+W +ISGY QNG + A F M+R+G N + + SALRAC
Sbjct: 596 GSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRAC 655
Query: 142 AR--MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC-GWIEDAWILFERIERKDVV 198
+ G I G I K R+ ++ V + L+ +Y C DA +F+RI ++ +
Sbjct: 656 QESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSI 715
Query: 199 SWNAMIGGLAMQGFNDDSFWLFRSMMRQGM----KPDCFTLGSILRASVGGIE--LMKIS 252
SWN++I + +G ++ LF SM ++G+ KP+ +T GS++ A+ ++ L +
Sbjct: 716 SWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLE 775
Query: 253 QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDD 312
Q+ + K G + +L+ +A++G A ++ M +++S L+ G +
Sbjct: 776 QMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQK 835
Query: 313 NHSKEA--FDLFKDMILKKMGIDDVILCLMLNICANVASLN----LGRQIHAFAFKYQ-S 365
A F KD++ GI+ ++L+ + + L GR++HA + +
Sbjct: 836 QGEAAAKVFHEMKDLV----GINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLN 891
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKK 425
A+GN L++MYAKSG IADA F+ M +K+ +SW SLI+G ++ +A E + +
Sbjct: 892 DNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLR 951
Query: 426 MKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRG 485
M+ G +P++ T +S L +C+ G G ++ D + K + + ++ L+A G
Sbjct: 952 MRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGL-KLGLDTDVSVSNALLALYAETG 1010
Query: 486 QLESAYNMIRQMNIKPTASLWSAILGACS 514
+ M S W++++GA S
Sbjct: 1011 CFTECLKVFSLMPEYDQVS-WNSVIGALS 1038
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 146/505 (28%), Positives = 250/505 (49%), Gaps = 36/505 (7%)
Query: 54 AHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDE 113
A + +G+ +L++ + ++ +A+ G A+ F++M RNVVS ++ G + E
Sbjct: 779 ARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGE 838
Query: 114 NALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALL 173
A VF M + V N +Y L A + L+ GR +KGR V +++ L
Sbjct: 839 AAAKVFHEM-KDLVGINSDSYVVLLSAFSEFSVLEEGR------RKGREVHAHVIRTGLN 891
Query: 174 D-----------LYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRS 222
D +YAK G I DA +FE + KD VSWN++I GL ++D+ F
Sbjct: 892 DNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLR 951
Query: 223 MMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKY 280
M R G P FTL S L AS+G I L + QIH +KLGL++ ++ +L+ +YA+
Sbjct: 952 MRRTGSMPSNFTLISTLSSCASLGWIMLGE--QIHCDGLKLGLDTDVSVSNALLALYAET 1009
Query: 281 GSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLM 340
G +++ M + D +S ++I + + +A F +M+ G+ V
Sbjct: 1010 GCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTF--- 1066
Query: 341 LNICANVASLNL---GRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD 397
+NI + V+SL+L QIHA KY S D A+GNAL+ Y K GE+ + + F M +
Sbjct: 1067 INILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSE 1126
Query: 398 -KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWE 456
++ +SW S+I+GY + H+A++L M +G + TF ++L AC+ G E
Sbjct: 1127 TRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGME 1186
Query: 457 LFTDMINKYRILPRAEHF--SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACS 514
+ I R ++ S +VD++++ G+++ A M ++ S W++++ +
Sbjct: 1187 VHACGI---RACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYS-WNSMISGYA 1242
Query: 515 IYGNTSLG-ELAARNLFDMEPEKSV 538
+G+ +L R + D +P V
Sbjct: 1243 RHGHGEKALKLFTRMMLDGQPPDHV 1267
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 185/535 (34%), Positives = 308/535 (57%), Gaps = 31/535 (5%)
Query: 71 VIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
++ YAK+G + A+ +R++V+W +MIS ++QN AL+ M+ GV+ +
Sbjct: 156 LMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPD 215
Query: 131 QFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILF 189
T++S L AC+ + L+ G+ I +++ +EN FV SAL+D+Y CG +E ++F
Sbjct: 216 GVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVF 275
Query: 190 ERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM-MRQGMKPDCFTLGSILRASVGGIEL 248
+ + + + WNAMI G A ++ + LF M G+ + T+ SI+ A V +
Sbjct: 276 DSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGI 335
Query: 249 MKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGF 308
+ IH +IK GLE++ L +LID+Y++ G I+++ +++ SM DI+S +I+ +
Sbjct: 336 SRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSY 395
Query: 309 ARDDNHSKEAFDLFKDM--ILKKMGID--------------DVILCLMLNICANVASLNL 352
S +A L +M I +K D + L +L CA++++L
Sbjct: 396 VIC-GRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAK 454
Query: 353 GRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAK 412
G++IHA+A + + VG+AL+DMYAK G + A R FD+M +NVI+W +I Y
Sbjct: 455 GKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGM 514
Query: 413 HGYGHEAIELYKKMKHEG-----MVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRI 467
HG G E++EL++ M EG + P +VTF++L +CSH+G+ EG LF M N++ I
Sbjct: 515 HGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGI 574
Query: 468 LPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA----SLWSAILGACSIYGNTSLGE 523
P +H++C+VDL R G++E AY ++ M P+ WS++LGAC IY N +GE
Sbjct: 575 EPAPDHYACIVDLVGRAGKVEEAYGLVNTM---PSGFDKVGAWSSLLGACRIYHNIEIGE 631
Query: 524 LAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+AA NL ++P+ + +YV+LSNIY++AG WD A R+ M+ ++K PG S+++
Sbjct: 632 IAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIE 686
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 142/492 (28%), Positives = 239/492 (48%), Gaps = 33/492 (6%)
Query: 52 IHAHIITNGYES--NLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQN 109
IHAH+ GY S ++ + ++ Y K G + A K FDR+ ER+ VSW ++IS +
Sbjct: 32 IHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYKVFDRITERDQVSWNSIISALCRF 91
Query: 110 GYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG---GRMIQGS-IQKGRFVEN 165
E A+ F ML G + FT S AC+ +R G G+ I G +KG +
Sbjct: 92 EEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKGHW--R 149
Query: 166 LFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR 225
F +AL+ +YAK G ++DA L E +D+V+WN+MI + ++ R M+
Sbjct: 150 TFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVL 209
Query: 226 QGMKPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLGLESSNKLTGS-LIDVYAKYGSI 283
+G+KPD T S+L A ++L++ +IH ++ N GS L+D+Y G +
Sbjct: 210 EGVKPDGVTFASVLPA-CSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQV 268
Query: 284 RSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNI 343
S ++ S+L I A+I+G+A+ + H ++A LF +M G+ + +
Sbjct: 269 ESGRLVFDSVLDRKIGLWNAMIAGYAQSE-HDEKALMLFIEM-EAAAGLYSNATTMSSIV 326
Query: 344 CANVASLNLGRQ--IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVI 401
A V + R+ IH + K + + NALIDMY++ G+I + R FD M D++++
Sbjct: 327 PAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIV 386
Query: 402 SWTSLIAGYAKHGYGHEAIELYKKM----------------KHEGMVPNDVTFLSLLFAC 445
SW ++I Y G +A+ L +M K PN +T +++L C
Sbjct: 387 SWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGC 446
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
+ +G E+ I + + S +VD++A+ G L A + QM I+ +
Sbjct: 447 ASLSALAKGKEIHAYAIRNL-LASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVIT- 504
Query: 506 WSAILGACSIYG 517
W+ I+ A ++G
Sbjct: 505 WNVIIMAYGMHG 516
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 163/334 (48%), Gaps = 13/334 (3%)
Query: 223 MMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT--GSLIDVYAKY 280
M+ G PD F ++L+A G EL QIH + K G S + +T +L+++Y K
Sbjct: 1 MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60
Query: 281 GSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLM 340
G + AY+++ + + D +S ++IS R + + A F+ M+++ L M
Sbjct: 61 GGLGDAYKVFDRITERDQVSWNSIISALCRFEEW-EVAIKAFRLMLMEGFEPSSFTLVSM 119
Query: 341 LNICANVA---SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD 397
C+N+ L LG+QIH F+ + + NAL+ MYAK G + DA D
Sbjct: 120 ALACSNLRKRDGLWLGKQIHGCCFR-KGHWRTFSNNALMAMYAKLGRLDDAKSLLVLFED 178
Query: 398 KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWEL 457
+++++W S+I+ ++++ EA+ + M EG+ P+ VTF S+L ACSH L G E+
Sbjct: 179 RDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEI 238
Query: 458 FTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
+ ++ + S +VD++ GQ+ES ++ + LW+A++ Y
Sbjct: 239 HAYALRTDDVIENSFVGSALVDMYCNCGQVESG-RLVFDSVLDRKIGLWNAMIAG---YA 294
Query: 518 NTSLGELAARNLFDMEPEKSV--NYVVLSNIYTA 549
+ E A +ME + N +S+I A
Sbjct: 295 QSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPA 328
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 129/264 (48%), Gaps = 22/264 (8%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IH ++I G E+N +L +I Y+++GD+ ++++ FD M +R++VSW +I+ Y G
Sbjct: 341 IHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGR 400
Query: 112 DENALLVFSAMLR----------------SGVRANQFTYSSALRACARMRWLQGGRMIQG 155
+ALL+ M R + N T + L CA + L G+ I
Sbjct: 401 SSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHA 460
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD 215
+ + V SAL+D+YAKCG + A +F+++ ++V++WN +I M G +
Sbjct: 461 YAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKE 520
Query: 216 SFWLFRSMMRQG-----MKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKL 269
S LF M+ +G +KP T ++ + S G+ +S H + + G+E +
Sbjct: 521 SLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDH 580
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSM 293
++D+ + G + AY L +M
Sbjct: 581 YACIVDLVGRAGKVEEAYGLVNTM 604
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 90/182 (49%), Gaps = 8/182 (4%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T M++L C A + IHA+ I N S + + + ++ YAK G + AR+ FD+M
Sbjct: 438 TLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQM 497
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG-----VRANQFTYSSALRACARMRW 146
P RNV++W +I Y +G + +L +F M+ G V+ + T+ + +C+
Sbjct: 498 PIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGM 557
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSA-LLDLYAKCGWIEDAWILFERIER--KDVVSWNAM 203
+ G + ++ +E A ++DL + G +E+A+ L + V +W+++
Sbjct: 558 VDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSL 617
Query: 204 IG 205
+G
Sbjct: 618 LG 619
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 193/553 (34%), Positives = 309/553 (55%), Gaps = 41/553 (7%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HA ++ NG + + ++ YAK+G V A+ FD ++++VSW +IS +QN
Sbjct: 209 VHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDR 267
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSI-QKGRFVENLFVKS 170
E ALL ML+SGVR N T +S L AC+ + L G+ I + +EN FV
Sbjct: 268 FEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGC 327
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ-GMK 229
AL+D+Y C E ++F+ + R+ + WNAMI G F+ ++ LF M+ + G+
Sbjct: 328 ALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLS 387
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
P+ TL S+L A V + IH ++K G E + +L+D+Y++ G I A +
Sbjct: 388 PNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSI 447
Query: 290 YRSMLKTDIISCTALISGF---ARDDN--------------HSKEAFDLFKDMILKKMGI 332
+ SM + DI+S +I+G+ R D+ H FD ++D +
Sbjct: 448 FGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKP 507
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAF 392
+ V L +L CA +A+L G++IHA+A K S D AVG+AL+DMYAK G + + F
Sbjct: 508 NSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVF 567
Query: 393 DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG-----MVPNDVTFLSLLFACSH 447
++M +NVI+W LI Y HG G EA++L+++M EG + PN+VT++++ + SH
Sbjct: 568 EQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSH 627
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM--NIKPTASL 505
+G+ EG LF M K+ I P ++H++C+VDL R GQ+E AYN+I+ M N+K +
Sbjct: 628 SGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDA- 686
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
WS++LGAC I+ N +GE+AA+NLF ++P ++Y ++ RK M+E
Sbjct: 687 WSSLLGACKIHQNLEIGEIAAKNLFVLDP-NVLDYGTKQSML--------GRK----MKE 733
Query: 566 RSLRKNPGYSFLQ 578
+ +RK PG S+++
Sbjct: 734 KGVRKEPGCSWIE 746
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 138/520 (26%), Positives = 241/520 (46%), Gaps = 32/520 (6%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HAH+ G + ++ Y K GD+ +AR+ FD + R+ VSW +MI+ +
Sbjct: 107 LHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEE 166
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARM--RWLQGGRMIQGSIQKGRFVENLFVK 169
E A+ +F ML V FT S AC+ + L G ++ ++ G + F
Sbjct: 167 WELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNGDW--RTFTN 224
Query: 170 SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
+AL+ +YAK G + +A LF+ + KD+VSWN +I L+ +++ M++ G++
Sbjct: 225 NALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVR 284
Query: 230 PDCFTLGSILRASVGGIELMKIS-QIHDLIIKLGLESSNKLTG-SLIDVYAKYGSIRSAY 287
P+ TL S+L A +E++ +IH ++ N G +L+D+Y
Sbjct: 285 PNGVTLASVLPA-CSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGR 343
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK-KMGIDDVILCLMLNICAN 346
++ M + I A+I+G+ R++ EA +LF +M+ + + + V L +L C
Sbjct: 344 LVFDGMFRRTIAVWNAMIAGYVRNE-FDYEAIELFVEMVFELGLSPNSVTLSSVLPACVR 402
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
S IH+ K+ D V NAL+DMY++ G I A F M K+++SW ++
Sbjct: 403 CESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTM 462
Query: 407 IAGYAKHGYGHEAIEL------------------YKKMKHEGMVPNDVTFLSLLFACSHT 448
I GY G +A+ L Y+ K+ + PN VT +++L C+
Sbjct: 463 ITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAAL 522
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
+G E+ + K + S +VD++A+ G L + + QM+++ + W+
Sbjct: 523 AALGKGKEIHAYAV-KQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVIT-WNV 580
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYT 548
++ A YG GE A + M E N + N T
Sbjct: 581 LIMA---YGMHGKGEEALKLFRRMVEEGDNNREIRPNEVT 617
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 155/315 (49%), Gaps = 16/315 (5%)
Query: 220 FRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAK 279
+ +M+ G+ PD F ++L+A+ G +L Q+H + K G + SL+++Y K
Sbjct: 73 YTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLVNMYGK 132
Query: 280 YGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCL 339
G I +A +++ + D +S ++I+ R + + A LF+ M+L+ +G L
Sbjct: 133 CGDIDAARRVFDEITNRDDVSWNSMINAACRFEEW-ELAVHLFRLMLLENVGPTSFTLVS 191
Query: 340 MLNICAN-VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK 398
+ + C+N + L LG+Q+HAF + + NAL+ MYAK G + +A FD DK
Sbjct: 192 VAHACSNLINGLLLGKQVHAFVLR-NGDWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDK 250
Query: 399 NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELF 458
+++SW ++I+ +++ EA+ M G+ PN VT S+L ACSH + G E+
Sbjct: 251 DLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIH 310
Query: 459 TDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
++ ++ + +VD++ Q E + M + T ++W+A++
Sbjct: 311 AFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGM-FRRTIAVWNAMIAG------ 363
Query: 519 TSLGELAARNLFDME 533
RN FD E
Sbjct: 364 ------YVRNEFDYE 372
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 141/286 (49%), Gaps = 24/286 (8%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T S+L C+ ++ IH+ ++ G+E + ++ ++ Y+++G + AR F M
Sbjct: 392 TLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSM 451
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRS------------------GVRANQFT 133
+++VSW MI+GY G ++AL + M R ++ N T
Sbjct: 452 NRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVT 511
Query: 134 YSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE 193
+ L CA + L G+ I K +++ V SAL+D+YAKCG + + +FE++
Sbjct: 512 LMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMS 571
Query: 194 RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG-----MKPDCFTLGSILRA-SVGGIE 247
++V++WN +I M G +++ LFR M+ +G ++P+ T +I + S G+
Sbjct: 572 VRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMV 631
Query: 248 LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
++ + + K G+E ++ L+D+ + G I AY L ++M
Sbjct: 632 DEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTM 677
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 106/231 (45%), Gaps = 33/231 (14%)
Query: 317 EAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALI 376
+A + +M+ + D+ +L A + LNLG+Q+HA FK+ + AV N+L+
Sbjct: 68 QAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLV 127
Query: 377 DMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDV 436
+MY K G+I A R FDE+ +++ +SW S+I + A+ L++ M E + P
Sbjct: 128 NMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSF 187
Query: 437 TFLSLLFACS------------HTGLTCEG-WELFTD--MINKYRILPRAEHFSCVVDLF 481
T +S+ ACS H + G W FT+ ++ Y L R + D+F
Sbjct: 188 TLVSVAHACSNLINGLLLGKQVHAFVLRNGDWRTFTNNALVTMYAKLGRVYEAKTLFDVF 247
Query: 482 ---------------ARRGQLESA---YNMIRQMNIKPTASLWSAILGACS 514
++ + E A +++ Q ++P +++L ACS
Sbjct: 248 DDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACS 298
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 91/187 (48%), Gaps = 8/187 (4%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T M++L C A + IHA+ + ++ + + ++ YAK G + +R F++M
Sbjct: 511 TLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQM 570
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG-----VRANQFTYSSALRACARMRW 146
RNV++W +I Y +G E AL +F M+ G +R N+ TY + + +
Sbjct: 571 SVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGM 630
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSA-LLDLYAKCGWIEDAWILFERIER--KDVVSWNAM 203
+ G + +++ +E A L+DL + G IE+A+ L + + K V +W+++
Sbjct: 631 VDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSL 690
Query: 204 IGGLAMQ 210
+G +
Sbjct: 691 LGACKIH 697
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 191/559 (34%), Positives = 316/559 (56%), Gaps = 14/559 (2%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNG-YESNLHLSTKVIIFYAKVGDVL-SARKAFDR 90
Y ++++ C + +I ++ G +ES++ + +I + K + +A K FD+
Sbjct: 169 YTAVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDK 228
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
M E NVV+WT MI+ Q G+ A+ F M+ SG +++FT SS ACA + L G
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKC---GWIEDAWILFERIERKDVVSWNAMIGGL 207
R + + ++ V+ +L+D+YAKC G ++D +F+R++ V+SW A+I G
Sbjct: 289 RQLHSWAIRSGLADD--VECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGY 346
Query: 208 AMQGFN--DDSFWLFRSMMRQG-MKPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLGL 263
MQ N ++ LF M+ QG ++P+ FT S +A G + ++ Q+ K GL
Sbjct: 347 -MQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKA-CGNVSDPRVGKQVLGHAFKRGL 404
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
S++ ++ S+I ++ K + A + S+ + +++S + G R+ + + AF+L
Sbjct: 405 ASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDF-EHAFELLS 463
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
++ +++G+ +L+ ANV SL G QIH+ K S + V NALI MY+K G
Sbjct: 464 EIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCG 523
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
I A+R F M ++NVISWTS+I G+AKHG+ +E + +M EG+ PN+VT++++L
Sbjct: 524 SIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILS 583
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
ACSH GL EGW F M ++I P+ EH++C+VDL R G L A+ I M +
Sbjct: 584 ACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADV 643
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
+W LGAC ++ NT LG+LAAR + + +P + Y+ LSNIY +AG W+ + + R+ M
Sbjct: 644 LVWRTFLGACRVHSNTELGKLAARKILEFDPNEPAAYIQLSNIYASAGKWEESTEMRRKM 703
Query: 564 EERSLRKNPGYSFLQSSKK 582
+ER+L K G S+++ K
Sbjct: 704 KERNLVKEGGCSWIEVGDK 722
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 150/537 (27%), Positives = 265/537 (49%), Gaps = 44/537 (8%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D T+ SLL+ CI + R L+HA +I E + L +I Y+K GD+ A+
Sbjct: 60 MDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSGDLTKAKDV 119
Query: 88 FD---RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
F+ R +R+VVSW+AM++ + NG + +A+ +F L G+ N + Y++ +RAC+
Sbjct: 120 FETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRACSNS 179
Query: 145 RWLQGGRMIQGSIQK-GRFVENLFVKSALLDLYAKC-GWIEDAWILFERIERKDVVSWNA 202
++ GR+I G + K G F ++ V +L+D++ K E+A+ +F+++ +VV+W
Sbjct: 180 DFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTL 239
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
MI GF ++ F M+ G + D FTL S+ A L Q+H I+ G
Sbjct: 240 MITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHSWAIRSG 299
Query: 263 LESSNKLTGSLIDVYAKY---GSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
L ++ + SL+D+YAK GS+ +++ M ++S TALI+G+ ++ N + EA
Sbjct: 300 L--ADDVECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLATEAI 357
Query: 320 DLFKDMILK-KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDM 378
+LF +MI + + + C NV+ +G+Q+ AFK + +++V N++I M
Sbjct: 358 NLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVISM 417
Query: 379 YAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTF 438
+ K + DA AF+ + +KN++S+ + + G ++ A EL ++ + + TF
Sbjct: 418 FVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAFTF 477
Query: 439 LSLLFACSHTGLTCEGWELFTD---------------MINKYRILPRAEHFSCVVDL--- 480
SLL ++ G +G ++ + +I+ Y + S V L
Sbjct: 478 ASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSLMDN 537
Query: 481 ------------FARRGQLE---SAYNMIRQMNIKPTASLWSAILGACSIYGNTSLG 522
FA+ G E +N + + +KP + AIL ACS G S G
Sbjct: 538 RNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSACSHVGLVSEG 594
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 197/398 (49%), Gaps = 53/398 (13%)
Query: 65 LHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLR 124
++++ ++I+ + GD+ A A D M A++G + FS++L+
Sbjct: 26 INVADRLILRHLNAGDLRGAVSALDLM---------------ARDGIRPMDSVTFSSLLK 70
Query: 125 SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIED 184
S +RA F R+ L R+I+ I+ + N +L+ LY+K G +
Sbjct: 71 SCIRARHF----------RLGKLVHARLIEFEIEPDSVLYN-----SLISLYSKSGDLTK 115
Query: 185 AWILFE---RIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
A +FE R ++DVVSW+AM+ G D+ LF + G+ P+ + +++RA
Sbjct: 116 AKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRA 175
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTG-SLIDVYAK-YGSIRSAYQLYRSMLKTDII 299
+ I ++K G S+ G SLID++ K S +AY+++ M + +++
Sbjct: 176 CSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVV 235
Query: 300 SCTALIS-----GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGR 354
+ T +I+ GF R EA F DM+L D L + + CA + +L+LGR
Sbjct: 236 TWTLMITRCMQMGFPR------EAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGR 289
Query: 355 QIHAFAFKYQSSYDAAVGNALIDMYAK---SGEIADANRAFDEMGDKNVISWTSLIAGYA 411
Q+H++A + + D V +L+DMYAK G + D + FD M D +V+SWT+LI GY
Sbjct: 290 QLHSWAIRSGLADD--VECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYM 347
Query: 412 KH-GYGHEAIELYKKMKHEGMV-PNDVTFLSLLFACSH 447
++ EAI L+ +M +G V PN TF S AC +
Sbjct: 348 QNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 92/177 (51%), Gaps = 2/177 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ SLL + + R+ IH+ ++ G N + +I Y+K G + +A + F M
Sbjct: 476 TFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSLM 535
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL-QGG 150
RNV+SWT+MI+G+A++G+ E L F+ M + GV+ N+ TY + L AC+ + + +G
Sbjct: 536 DNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSACSHVGLVSEGW 595
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGG 206
R + + + + ++DL + G + DA+ + + DV+ W +G
Sbjct: 596 RHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGA 652
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 189/581 (32%), Positives = 313/581 (53%), Gaps = 40/581 (6%)
Query: 34 MSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVI---IFYAKVGDVLSARKAFDR 90
+SLL C K + +IHA +I G + + +K+I + + A FD
Sbjct: 6 LSLLHNC---KTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDS 62
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+ E N++ W M G+A + +AL ++ M+ G+ N +T+ L+ACA+ + + G
Sbjct: 63 IQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREG 122
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA------------------------- 185
+ I G + K +L+V ++L+ +Y K G EDA
Sbjct: 123 QQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASN 182
Query: 186 -WI-----LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
+I +F+ I KDVVSWNA+I G A G ++ LF+ MM+ +KPD T+ ++L
Sbjct: 183 GYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVL 242
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
A + Q+H I G S+ K+ +LID+Y K G + +A L+ + D+I
Sbjct: 243 SACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVI 302
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
S LI G+ N KEA LF++M+ ++V + +L CA++ ++++GR IH +
Sbjct: 303 SWNTLIGGYTHM-NLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVY 361
Query: 360 AFKYQS--SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
K S +++ +LIDMYAK G+I A + FD M ++++ SW ++I G+A HG +
Sbjct: 362 IDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRAN 421
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
A +++ +M+ +G+ P+D+TF+ LL ACSH+G+ G +F M Y+I P+ EH+ C+
Sbjct: 422 PAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCM 481
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKS 537
+DL G + A MI M + P +W ++L AC ++GN LGE A+NL +EP+ S
Sbjct: 482 IDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNS 541
Query: 538 VNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+YV+LSNIY AG W+ K R L+ ++ ++K PG S ++
Sbjct: 542 GSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIE 582
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 141/420 (33%), Positives = 212/420 (50%), Gaps = 40/420 (9%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ LL+ C KA R+ IH H++ G + +L++ T +I Y K G ARK FD+
Sbjct: 105 TFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQS 164
Query: 92 PERNVVSWTAMISGYAQNGY--------DE-----------------------NALLVFS 120
R+VVS+TA+I GYA NGY DE AL +F
Sbjct: 165 SHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFK 224
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M+++ V+ ++ T + L ACA+ ++ GR + I F NL + +AL+DLY KCG
Sbjct: 225 EMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCG 284
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+E A LFE + KDV+SWN +IGG ++ LF+ M+R G P+ T+ SIL
Sbjct: 285 EVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILP 344
Query: 241 --ASVGGIELMKISQIHDLIIKL--GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT 296
A +G I++ + IH I K G+ + + L SLID+YAK G I +A Q++ SML
Sbjct: 345 ACAHLGAIDIGR--WIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNR 402
Query: 297 DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI 356
+ S A+I GFA + AFD+F M + DD+ +L+ C++ L+LGR I
Sbjct: 403 SLSSWNAMIFGFAM-HGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHI 461
Query: 357 -HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHG 414
+ Y+ + +ID+ SG +A + M D + + W SL+ HG
Sbjct: 462 FRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHG 521
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 190/405 (46%), Gaps = 42/405 (10%)
Query: 9 KTGQLKQALKFSLSCPDTLLDP--STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+TG K+AL+ T + P ST +++L C + +H+ I +G+ SNL
Sbjct: 212 ETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLK 271
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ +I Y K G+V +A F+ + ++V+SW +I GY + ALL+F MLRSG
Sbjct: 272 IVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG 331
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKG-RFVENL-FVKSALLDLYAKCGWIED 184
N+ T S L ACA + + GR I I K + V N ++++L+D+YAKCG IE
Sbjct: 332 ESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEA 391
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG 244
A +F+ + + + SWNAMI G AM G + +F +F M + G++PD T +L A
Sbjct: 392 AQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACS- 450
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
H ++ LG + S+ + Y I + Y M+ D++ + L
Sbjct: 451 ----------HSGMLDLG----RHIFRSMTEDY----KITPKLEHYGCMI--DLLGHSGL 490
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
KEA ++ M +M D VI C +L C ++ LG K +
Sbjct: 491 F----------KEAEEMINSM---EMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIE 537
Query: 365 SSYDAAVGNALIDMYAKSG---EIADANRAFDEMGDKNVISWTSL 406
++ L ++YA +G E+A ++ G K V +S+
Sbjct: 538 PK-NSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSI 581
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 187/578 (32%), Positives = 311/578 (53%), Gaps = 41/578 (7%)
Query: 37 LQFCIDKKAE-RQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
L + ID+ +Q +HA II +G + + K++ ++ D+ A K FD++P+ N
Sbjct: 39 LHYLIDQCISLKQLKHVHAQIILHGLATQVLTLGKLVSSSVQLRDLRYAHKLFDQIPQPN 98
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG 155
+ +I GY+ + +LL++ M+ G+ NQFT L+ACA G +
Sbjct: 99 KFMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSCYWLGVCVHA 158
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD 215
K + V++A+L++Y CG I A +F+ I + +VSWN+MI G + G +++
Sbjct: 159 QSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKMGRSEE 218
Query: 216 SFWLFRSMMRQGMKPDCFTLGSILRASV--GGIELMKISQIHDLIIKLGLESSNKLTGSL 273
+ +FR M G++PD FTL +L S G +L + +H ++ G+E + +T +L
Sbjct: 219 AVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLH--MVVTGIEIDSIVTNAL 276
Query: 274 IDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHS------------------ 315
+D+YAK G+++ A ++ ML D++S T +I+ +A NH
Sbjct: 277 MDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYA---NHGLIDCALEFFNQMPGKNVV 333
Query: 316 ---------------KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
EA DLF M + +D L +L+ C+++ L LG+Q H++
Sbjct: 334 SWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYI 393
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
F + A + NA+IDMYAK G + A F M +KN +SW +I A HGYG EAI
Sbjct: 394 FDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAI 453
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDL 480
E+++KM+ G+ P+++TF LL ACSH+GL G F M + I P EH++C+VDL
Sbjct: 454 EMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMVDL 513
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNY 540
RRG L A ++I++M +KP +WSA+LGAC YGN ++G+ + L ++ S Y
Sbjct: 514 LGRRGLLGEAISLIKKMPVKPDVVVWSALLGACRTYGNLAIGKQIMKQLLELGRYNSGLY 573
Query: 541 VVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
V+LSN+Y+ + WD+ + K++++ ++K SF++
Sbjct: 574 VLLSNMYSESQRWDDMKNIWKILDQNGIKKCRAISFIE 611
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 192/433 (44%), Gaps = 36/433 (8%)
Query: 21 LSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGD 80
+ C L + T +L+ C K +HA G S+ + ++ Y G
Sbjct: 125 MVCDGILPNQFTIPFVLKACAAKSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGL 184
Query: 81 VLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRA 140
+ SAR+ FD + ER +VSW +MI+GY++ G E A+L+F M G+ + FT L
Sbjct: 185 ITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSV 244
Query: 141 CARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSW 200
+ GR + + + V +AL+D+YAKCG ++ A +F+++ KDVVSW
Sbjct: 245 STKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSW 304
Query: 201 NAMIGGLAMQGFNDDSF-------------W------------------LFRSMMRQGMK 229
MI A G D + W LF M G+
Sbjct: 305 TCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVM 364
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
+ TL +IL + +L Q H I + S L ++ID+YAK G++++A +
Sbjct: 365 ANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDV 424
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ M + + +S +I A + KEA ++F+ M + D++ +L+ C++
Sbjct: 425 FFGMPEKNAVSWNVIIGALAL-HGYGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGL 483
Query: 350 LNLGRQ-IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK-NVISWTSLI 407
++ G+ + S D ++D+ + G + +A +M K +V+ W++L+
Sbjct: 484 VDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEAISLIKKMPVKPDVVVWSALL 543
Query: 408 AGYAKHGYGHEAI 420
A YG+ AI
Sbjct: 544 G--ACRTYGNLAI 554
>gi|356495756|ref|XP_003516739.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71420-like [Glycine max]
Length = 782
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 202/598 (33%), Positives = 329/598 (55%), Gaps = 28/598 (4%)
Query: 4 VRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG--Y 61
+RA G +++AL SL + L TY SL C KK + +H +++
Sbjct: 66 IRALSTQGNIEEAL--SLLYTHSSLSLQTYASLFHACAQKKCLQHGMTLHHYVLHKDPTI 123
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSA 121
++++ L+ +I Y K G + AR FD+M RN+VSWTA+ISG+AQ+G +FS
Sbjct: 124 QNDVFLTNHIINMYCKCGHLAYARYVFDQMSHRNIVSWTALISGHAQSGLVRECFSLFSG 183
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK--- 178
+L + R N+F ++S L AC ++ G + K N++V ++L+ +Y+K
Sbjct: 184 LL-AHFRPNEFAFASLLSACEEHD-IKCGMQVHAVALKISLDANVYVANSLITMYSKRSG 241
Query: 179 --CGWIE---DAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCF 233
G+ + DAW +F+ +E +++VSWN+MI ++G D + LF M G+ D
Sbjct: 242 FGGGYAQTPDDAWTMFKSMEFRNLVSWNSMIAXFQLRGLGDKAICLFAHMYCNGIGFDRA 301
Query: 234 TLGSILRA-------SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGS-IRS 285
TL S+ + V L K Q+H L IK GL S ++ +LI YA G I
Sbjct: 302 TLLSVFSSLNECGAFDVINTYLRKCFQLHCLTIKSGLISEIEVVTALIKSYANLGGHISD 361
Query: 286 AYQLYR-SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNIC 344
Y+++ + + DI+S TALIS FA D ++AF LF + + D + L C
Sbjct: 362 CYRIFHDTSSQLDIVSWTALISVFAERD--PEQAFLLFCQLHRQSYLPDWYTFSIALKAC 419
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWT 404
A + IH+ K D + NAL+ YA+ G +A + + F+EMG +++SW
Sbjct: 420 AYFVTEQHAMAIHSQVIKKGFQEDTVLCNALMHAYARCGSLALSEQVFNEMGCHDLVSWN 479
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK 464
S++ YA HG +A+EL+++M + P+ TF++LL ACSH GL EG +LF M +
Sbjct: 480 SMLKSYAIHGQAKDALELFQQMN---VCPDSATFVALLSACSHVGLVDEGVKLFNSMSDD 536
Query: 465 YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGEL 524
+ ++P+ +H+SC+VDL+ R G++ A +IR+M +KP + +WS++LG+C +G T L +L
Sbjct: 537 HGVVPQLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGETRLAKL 596
Query: 525 AARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
AA ++EP S+ YV +SNIY++ G++ A R M + +RK PG S+++ K+
Sbjct: 597 AADKFKELEPNNSLGYVQMSNIYSSGGSFTKAGLIRNEMSDFKVRKEPGLSWVEIGKQ 654
>gi|15233050|ref|NP_191676.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|6850884|emb|CAB71047.1| putative protein [Arabidopsis thaliana]
gi|332646643|gb|AEE80164.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 783
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 194/578 (33%), Positives = 304/578 (52%), Gaps = 40/578 (6%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K+G +A + P+ Y S+L+ C + IH H I G++ +++
Sbjct: 102 KSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVN 161
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMP-ERNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
+ ++ YA+ + A F+ M E+N V+WT+M++GY+QNG+ A+ F + R
Sbjct: 162 VVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRRE 221
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
G ++NQ+T+ S L ACA + + G + I K F N++V+SAL+D+YAKC +E A
Sbjct: 222 GNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESA 281
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGG 245
L E +E DVVSWN+MI G QG ++ +F M + MK D FT+ SIL
Sbjct: 282 RALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALS 341
Query: 246 IELMKI-SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
MKI S H LI+K G + + +L+D+YAK G + SA +++ M++ D+IS TAL
Sbjct: 342 RTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTAL 401
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
++G + ++ EA LF +M + + D ++ +L+ A + L G+Q+H K
Sbjct: 402 VTGNTHNGSYD-EALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSG 460
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
+V N+L+ MY K G + DAN F+ M +++I+WT LI GYAK+G +A
Sbjct: 461 FPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDA----- 515
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
F M Y I P EH++C++DLF R
Sbjct: 516 ------------------------------QRYFDSMRTVYGITPGPEHYACMIDLFGRS 545
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLS 544
G ++ QM ++P A++W AIL A +GN GE AA+ L ++EP +V YV LS
Sbjct: 546 GDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLS 605
Query: 545 NIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
N+Y+AAG D A R+LM+ R++ K PG S+++ K
Sbjct: 606 NMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGK 643
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 140/459 (30%), Positives = 225/459 (49%), Gaps = 8/459 (1%)
Query: 71 VIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
+I+ Y+ + A K F P +N +SW A+ISGY ++G A +F M G++ N
Sbjct: 65 MIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPN 124
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE 190
++T S LR C + L G I G K F ++ V + LL +YA+C I +A LFE
Sbjct: 125 EYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFE 184
Query: 191 RIE-RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELM 249
+E K+ V+W +M+ G + GF + FR + R+G + + +T S+L A
Sbjct: 185 TMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACR 244
Query: 250 KISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFA 309
Q+H I+K G +++ + +LID+YAK + SA L M D++S ++I G
Sbjct: 245 VGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCV 304
Query: 310 RDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA-NVASLNLGRQIHAFAFKYQSSYD 368
R EA +F M + M IDD + +LN A + + + H K +
Sbjct: 305 R-QGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATY 363
Query: 369 AAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKH 428
V NAL+DMYAK G + A + F+ M +K+VISWT+L+ G +G EA++L+ M+
Sbjct: 364 KLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRV 423
Query: 429 EGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLE 488
G+ P+ + S+L A + L G ++ + I K + +V ++ + G LE
Sbjct: 424 GGITPDKIVTASVLSASAELTLLEFGQQVHGNYI-KSGFPSSLSVNNSLVTMYTKCGSLE 482
Query: 489 SAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAAR 527
A + M I+ + I+G Y L E A R
Sbjct: 483 DANVIFNSMEIRDLITWTCLIVG----YAKNGLLEDAQR 517
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 192/391 (49%), Gaps = 25/391 (6%)
Query: 167 FVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ 226
F + ++ Y+ + DA LF K+ +SWNA+I G G ++F LF M
Sbjct: 60 FTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSD 119
Query: 227 GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSA 286
G+KP+ +TLGS+LR + L++ QIH IK G + + L+ +YA+ I A
Sbjct: 120 GIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEA 179
Query: 287 YQLYRSML-KTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
L+ +M + + ++ T++++G+++ + + +A + F+D+ + + +L CA
Sbjct: 180 EYLFETMEGEKNNVTWTSMLTGYSQ-NGFAFKAIECFRDLRREGNQSNQYTFPSVLTACA 238
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
+V++ +G Q+H K + V +ALIDMYAK E+ A + M +V+SW S
Sbjct: 239 SVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNS 298
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL--FACSHTGLTCEGWE---LFTD 460
+I G + G EA+ ++ +M M +D T S+L FA S T + +
Sbjct: 299 MIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKT 358
Query: 461 MINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTS 520
Y+++ A +VD++A+RG ++SA + M K S W+A+ + GNT
Sbjct: 359 GYATYKLVNNA-----LVDMYAKRGIMDSALKVFEGMIEKDVIS-WTAL-----VTGNTH 407
Query: 521 LGEL-AARNLF------DMEPEKSVNYVVLS 544
G A LF + P+K V VLS
Sbjct: 408 NGSYDEALKLFCNMRVGGITPDKIVTASVLS 438
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 51/102 (50%)
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
F D N +I Y+ S ++DA + F KN ISW +LI+GY K G EA
Sbjct: 51 FDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAF 110
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI 462
L+ +M+ +G+ PN+ T S+L C+ L G ++ I
Sbjct: 111 NLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTI 152
>gi|255558188|ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540613|gb|EEF42176.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 589
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 184/549 (33%), Positives = 294/549 (53%), Gaps = 5/549 (0%)
Query: 30 PSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFD 89
P SLL C KA +HA + G S++ +S VI Y+K G+V+ AR+ FD
Sbjct: 3 PEAIGSLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFD 62
Query: 90 RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG 149
M +RN+VSW+A+ISGY Q G AL +FS M + N++ ++S + ACA + L
Sbjct: 63 EMSDRNLVSWSAIISGYDQTGQPLLALNLFSQM---RIVPNEYVFASVISACASLTALSQ 119
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
G + K V FV +AL+ +Y KCG DA ++ + + VS+NA+I G
Sbjct: 120 GLQVHAQSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVE 179
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
+ F+ M ++G PD FT +L + + Q+H +IKL LE S +
Sbjct: 180 NQQPEKGIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFI 239
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI-LK 328
+I +Y+K+ I A +++ + + D+IS L++ +H + A +F+DM+ +
Sbjct: 240 GNVIITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHER-ALRVFRDMLDVC 298
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ DD +L CA +AS+ G+QIH + + D V NAL++MYAK G I ++
Sbjct: 299 FVKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNS 358
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
F D+N++SW ++IA + HG G A+E ++KMK G+ P+ VTF+ LL AC+H
Sbjct: 359 YDVFRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNHA 418
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
GL EG F M Y I P EHFSC++DL R G+L+ A + ++ + +
Sbjct: 419 GLVEEGQVYFNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQEAEEYMEKLPFGHDPIILGS 478
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L AC ++G+ +GE A L ++P + YV+LSN+Y + W + K+++ L
Sbjct: 479 LLSACRLHGDMVIGEHLATQLLKLQPVTTSPYVLLSNLYASDEMWGGVAEAWKMLKYSGL 538
Query: 569 RKNPGYSFL 577
+K PG+S +
Sbjct: 539 KKEPGHSLI 547
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 106/214 (49%), Gaps = 1/214 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ LL C + +H +I E + + +I Y+K + A K F
Sbjct: 201 DRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIITMYSKFNLIEEAEKVF 260
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG-VRANQFTYSSALRACARMRWL 147
+ E++++SW +++ E AL VF ML V+ + FT++ L ACA + +
Sbjct: 261 GLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPDDFTFAGVLAACAGLASI 320
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G+ I G + + R +++ V +AL+++YAKCG I++++ +F R +++VSWN +I
Sbjct: 321 RHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFRRTSDRNLVSWNTIIAAF 380
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
G + F M G+ PD T +L A
Sbjct: 381 GNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTA 414
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 1/165 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ +L C + R IH H+I ++ +S ++ YAK G + ++ F
Sbjct: 303 DDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVF 362
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
R +RN+VSW +I+ + +G AL F M G+ + T+ L AC ++
Sbjct: 363 RRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNHAGLVE 422
Query: 149 GGRMIQGSIQKGRFV-ENLFVKSALLDLYAKCGWIEDAWILFERI 192
G++ S+++ + N+ S L+DL + G +++A E++
Sbjct: 423 EGQVYFNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQEAEEYMEKL 467
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 190/550 (34%), Positives = 317/550 (57%), Gaps = 6/550 (1%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
SL I K E IHA +I G + + + K+I YA++G + SAR+ FD+ P+
Sbjct: 9 SLKTLLITSKDEPTIAKIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQC 68
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMI- 153
V +W AMI Y++ G AL ++ M GVR + TY+ L+AC R L+ G
Sbjct: 69 GVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETW 128
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN 213
+ ++ +G + +++FV +A+L+LYAKCG +++A +F+++ R+D+V W MI GLA G
Sbjct: 129 RQAVDQG-YGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQA 187
Query: 214 DDSFWLFRSMMRQGMKPD-CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS 272
++ ++R M ++ ++ D LG I + G M +S IH +I+ + + S
Sbjct: 188 REAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLS-IHGYMIRKDIIMDVIVQTS 246
Query: 273 LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI 332
L+D+YAK G + A ++R ML ++IS +ALISGFA++ + A L DM
Sbjct: 247 LVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQN-GFAGNALQLVVDMQSFGYKP 305
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAF 392
D V L +L C+ V L LG+ +H + + + +D A+IDMY+K G ++ A F
Sbjct: 306 DSVSLVSVLLACSQVGFLKLGKSVHGYIVR-RLHFDCVSSTAVIDMYSKCGSLSFARTVF 364
Query: 393 DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTC 452
D++ ++ ISW ++IA Y HG G EA+ L+ +M+ + P+ TF SLL A SH+GL
Sbjct: 365 DQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVE 424
Query: 453 EGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
+G F+ M+N+Y+I P +H++C+VDL +R G++E A +I M +P ++W A+L
Sbjct: 425 KGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSG 484
Query: 513 CSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNP 572
C +G +GE+AA+ + ++ P+ Y ++SN + A WD + RK+M++ ++K P
Sbjct: 485 CLNHGKFLIGEMAAKKVLELNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVP 544
Query: 573 GYSFLQSSKK 582
GYS ++ + K
Sbjct: 545 GYSVMEVNGK 554
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 192/392 (48%), Gaps = 12/392 (3%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D STY +L+ C R + GY ++ + V+ YAK G + A + F
Sbjct: 104 DSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVF 163
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D+M R++V WT MI+G AQNG A+ ++ M + V + ++AC + +
Sbjct: 164 DKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSK 223
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G I G + + + ++ V+++L+D+YAK G +E A +F R+ K+V+SW+A+I G A
Sbjct: 224 MGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFA 283
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGLESS 266
GF ++ L M G KPD +L S+L A VG ++L K +H I++ L
Sbjct: 284 QNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGK--SVHGYIVRR-LHFD 340
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ ++ID+Y+K GS+ A ++ + D IS A+I+ + + +EA LF M
Sbjct: 341 CVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGS-GEEALSLFLQMR 399
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGR---QIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
+ D +L+ ++ + GR I +K Q S ++D+ +++G
Sbjct: 400 ETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYA--CMVDLLSRAG 457
Query: 384 EIADANRAFDEM-GDKNVISWTSLIAGYAKHG 414
+ +A + M + + W +L++G HG
Sbjct: 458 RVEEAQELIESMITEPGIAIWVALLSGCLNHG 489
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 183/553 (33%), Positives = 309/553 (55%), Gaps = 7/553 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ S+L + +HA + G S + + ++ YAK G V AR F M
Sbjct: 207 TFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGM 266
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
R++VSW +++G NG+D AL +F S Q TY++ ++ CA ++ L R
Sbjct: 267 ETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLAR 326
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGGLAMQ 210
+ S+ K F V +AL+D Y+K G + +A +F + ++VVSW AMI G
Sbjct: 327 QLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQN 386
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
G + LF M G+ P+ FT +IL ASV + QIH +IK E ++ +
Sbjct: 387 GDVPLAAALFSRMREDGVAPNDFTYSTILTASVASLP----PQIHAQVIKTNYECTSIVG 442
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
+L+ Y+K + A +++ + + D++S +A+++ +A+ + S A ++F M + +
Sbjct: 443 TALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGD-SDGATNIFIKMTMHGL 501
Query: 331 GIDDVILCLMLNICAN-VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
++ + +++ CA+ A ++LGRQ HA + K++ V +AL+ MYA+ G I A
Sbjct: 502 KPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQ 561
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
F+ D++++SW S+++GYA+HGY +A++++++M+ EG+ + VTFLS++ C+H G
Sbjct: 562 CIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAG 621
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
L EG F M Y I P EH++C+VDL++R G+L+ A ++I M+ +W +
Sbjct: 622 LVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTL 681
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
LGAC ++ N LG+LAA L +EP S YV+LSNIY+AAG W + RKLM+ + ++
Sbjct: 682 LGACKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVK 741
Query: 570 KNPGYSFLQSSKK 582
K G S++Q K
Sbjct: 742 KEAGCSWIQIKNK 754
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 141/520 (27%), Positives = 256/520 (49%), Gaps = 23/520 (4%)
Query: 9 KTGQLKQALKFSLS---CPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYE-SN 64
+ G + QAL L C + + +L+ C +H I G++ +
Sbjct: 79 RRGSVHQALDHFLDVHRCHGGRVGGGALVGVLKVCGSVPDRVLGKQLHGLCIRCGHDRGD 138
Query: 65 LHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLR 124
+ + T ++ Y K V+ RK F+ MP+RNVV+WT++++GY Q+G + + +F M
Sbjct: 139 VGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRA 198
Query: 125 SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIED 184
GV N T++S L A + GR + K +FV ++L+++YAKCG +E+
Sbjct: 199 EGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEE 258
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFR------SMMRQGMKPDCFTLGSI 238
A ++F +E +D+VSWN ++ GL + G + ++ LF +M+ Q T ++
Sbjct: 259 ARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQS------TYATV 312
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT-D 297
++ +L Q+H ++K G S + +L+D Y+K G + +A ++ M + +
Sbjct: 313 IKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQN 372
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
++S TA+I+G ++ + A LF M + +D +L A+VASL QIH
Sbjct: 373 VVSWTAMINGCIQNGD-VPLAAALFSRMREDGVAPNDFTYSTILT--ASVASLP--PQIH 427
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
A K + VG AL+ Y+K +A F + K+V+SW++++ YA+ G
Sbjct: 428 AQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSD 487
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
A ++ KM G+ PN+ T S++ AC+ + F + K+R S +
Sbjct: 488 GATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSAL 547
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
V ++AR+G +ESA + + + S W+++L + +G
Sbjct: 548 VSMYARKGSIESAQCIFERQTDRDLVS-WNSMLSGYAQHG 586
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 222/469 (47%), Gaps = 39/469 (8%)
Query: 80 DVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS-GVRANQFTYSSAL 138
D AR+AFD +P RN + + +A+ G AL F + R G R L
Sbjct: 53 DATGARQAFDEIPHRNTLDHA--LFDHARRGSVHQALDHFLDVHRCHGGRVGGGALVGVL 110
Query: 139 RACARMRWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDV 197
+ C + G+ + G I+ G ++ V ++L+D+Y K + D +FE + +++V
Sbjct: 111 KVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNV 170
Query: 198 VSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIH 255
V+W +++ G G D LF M +G+ P+ T S+L AS G ++L + ++H
Sbjct: 171 VTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGR--RVH 228
Query: 256 DLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHS 315
+K G S+ + SL+++YAK G + A ++ M D++S L++G + H
Sbjct: 229 AQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVL-NGHD 287
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNAL 375
EA LF D + ++ +CAN+ L L RQ+H+ K V AL
Sbjct: 288 LEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTAL 347
Query: 376 IDMYAKSGEIADANRAFDEM-GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
+D Y+K+G++ +A F M G +NV+SWT++I G ++G A L+ +M+ +G+ PN
Sbjct: 348 MDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPN 407
Query: 435 DVTFLSLLFACS-------HTGLTCEGWE----LFTDMINKYRILPRAEH---------- 473
D T+ ++L A H + +E + T ++ Y L E
Sbjct: 408 DFTYSTILTASVASLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQ 467
Query: 474 -----FSCVVDLFARRGQLESAYNMIRQMN---IKPTASLWSAILGACS 514
+S ++ +A+ G + A N+ +M +KP S+++ AC+
Sbjct: 468 KDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACA 516
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 186/535 (34%), Positives = 298/535 (55%), Gaps = 30/535 (5%)
Query: 71 VIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
++ YAK+G V ++ F+ +R++VSW MIS ++Q+ AL F M+ GV +
Sbjct: 237 LMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELD 296
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGR-FVENLFVKSALLDLYAKCGWIEDAWILF 189
T +S L AC+ + L G+ I + + +EN FV SAL+D+Y C +E +F
Sbjct: 297 GVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVF 356
Query: 190 ERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR-QGMKPDCFTLGSILRASVGGIEL 248
+ I + + WNAMI G A G ++ + LF M++ G+ P+ T+ S++ A V
Sbjct: 357 DHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAF 416
Query: 249 MKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGF 308
IH +KLG + + +L+D+Y++ G + + ++ SM D +S +I+G+
Sbjct: 417 SNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGY 476
Query: 309 ARDDNHSKEAFDLFKDMILKKM-------------------GIDDVILCLMLNICANVAS 349
+S A L +M ++M + + L +L CA +A+
Sbjct: 477 VLSGRYSN-ALVLLHEM--QRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAA 533
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
+ G++IHA+A + + D VG+AL+DMYAK G + + R F+EM +KNVI+W LI
Sbjct: 534 IAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMA 593
Query: 410 YAKHGYGHEAIELYKKMKHEG-----MVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK 464
HG G EA+EL+K M E PN+VTF+++ ACSH+GL EG LF M +
Sbjct: 594 CGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHD 653
Query: 465 YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIK-PTASLWSAILGACSIYGNTSLGE 523
+ + P ++H++CVVDL R GQLE AY ++ M + WS++LGAC I+ N LGE
Sbjct: 654 HGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGE 713
Query: 524 LAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+AA+NL +EP + +YV+LSNIY++AG W+ A + RK M + ++K PG S+++
Sbjct: 714 VAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIE 768
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 227/432 (52%), Gaps = 21/432 (4%)
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P R+ SW + ++ A+ + M SG R + F + + L+A + ++ L+ G
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 152 MIQGSIQK-GRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
I + K G ++ V + L+++Y KCG I D +F+RI +D VSWN+ I L
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRF 172
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS-----VGGIELMKISQIHDLIIKLGLES 265
+ + FR+M + M+ FTL S+ A + G+ L K Q+H +++G +
Sbjct: 173 EKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGK--QLHGYSLRVG-DQ 229
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+L+ +YAK G + + L+ S + D++S +IS F++ D S EA F+ M
Sbjct: 230 KTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFS-EALAFFRLM 288
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA-VGNALIDMYAKSGE 384
+L+ + +D V + +L C+++ L++G++IHA+ + + + VG+AL+DMY +
Sbjct: 289 VLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQ 348
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM-KHEGMVPNDVTFLSLLF 443
+ R FD + + + W ++I+GYA++G +A+ L+ +M K G++PN T S++
Sbjct: 349 VESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMP 408
Query: 444 ACSHTGLTCEGWELFTDMINKY--RILPRAEHF--SCVVDLFARRGQLESAYNMIRQMNI 499
AC H CE + + I+ Y ++ + + + + ++D+++R G+++ + + M +
Sbjct: 409 ACVH----CEAFS-NKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEV 463
Query: 500 KPTASLWSAILG 511
+ S + I G
Sbjct: 464 RDRVSWNTMITG 475
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 138/519 (26%), Positives = 245/519 (47%), Gaps = 35/519 (6%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGY-ESNLHLSTKVIIFYAKVGDVL 82
PD P+ ++ K E+ IHA + GY S++ ++ ++ Y K G +
Sbjct: 90 PDNFAFPAVLKAVSGLQDLKTGEQ----IHAAAVKFGYGSSSVTVANTLVNMYGKCGGIG 145
Query: 83 SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA 142
K FDR+ +R+ VSW + I+ + E AL F AM + + FT S AC+
Sbjct: 146 DVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACS 205
Query: 143 RMRWLQG---GRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVV 198
+ + G G+ + G S++ G + F +AL+ +YAK G ++D+ LFE +D+V
Sbjct: 206 NLGVMHGLRLGKQLHGYSLRVGD--QKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMV 263
Query: 199 SWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLI 258
SWN MI + ++ FR M+ +G++ D T+ S+L A L +IH +
Sbjct: 264 SWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYV 323
Query: 259 IKLGLESSNKLTGS-LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKE 317
++ N GS L+D+Y + S +++ +L I A+ISG+AR+ K
Sbjct: 324 LRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEK- 382
Query: 318 AFDLFKDMILKKMGI--DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNAL 375
A LF +MI K G+ + + ++ C + + + IH +A K D V NAL
Sbjct: 383 ALILFIEMI-KVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNAL 441
Query: 376 IDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG-YGHEAIELYKKMKHEGMV-- 432
+DMY++ G++ + FD M ++ +SW ++I GY G Y + + L++ + E
Sbjct: 442 MDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDV 501
Query: 433 --------------PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVV 478
PN +T +++L C+ +G E+ I + + S +V
Sbjct: 502 KKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAI-RNMLASDITVGSALV 560
Query: 479 DLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
D++A+ G L + + +M K + W+ ++ AC ++G
Sbjct: 561 DMYAKCGCLNLSRRVFNEMPNKNVIT-WNVLIMACGMHG 598
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 137/290 (47%), Gaps = 23/290 (7%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L + +T S++ C+ +A IH + + G++ + ++ ++ Y+++G + +
Sbjct: 397 LPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISET 456
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLR-----------------SGVRA 129
FD M R+ VSW MI+GY +G NAL++ M R +
Sbjct: 457 IFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKP 516
Query: 130 NQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILF 189
N T + L CA + + G+ I + ++ V SAL+D+YAKCG + + +F
Sbjct: 517 NAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVF 576
Query: 190 ERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG-----MKPDCFTLGSILRA-SV 243
+ K+V++WN +I M G +++ LF++M+ + KP+ T ++ A S
Sbjct: 577 NEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSH 636
Query: 244 GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
G+ ++ + + G+E ++ ++D+ + G + AY+L +M
Sbjct: 637 SGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTM 686
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 91/183 (49%), Gaps = 8/183 (4%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T M++L C A + IHA+ I N S++ + + ++ YAK G + +R+ F+ M
Sbjct: 520 TLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEM 579
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAML----RSG-VRANQFTYSSALRACARMRW 146
P +NV++W +I +G E AL +F M+ R G + N+ T+ + AC+
Sbjct: 580 PNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGL 639
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSA-LLDLYAKCGWIEDAWILFERI--ERKDVVSWNAM 203
+ G + ++ VE A ++DL + G +E+A+ L + E V +W+++
Sbjct: 640 ISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSL 699
Query: 204 IGG 206
+G
Sbjct: 700 LGA 702
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 179/550 (32%), Positives = 303/550 (55%), Gaps = 5/550 (0%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
STY S+ + C A + +H H + + + + + T + YAK + A K F+
Sbjct: 240 STYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNT 299
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+P S+ A+I GYA+ AL +F ++ R+ + ++ + S AL AC+ ++ G
Sbjct: 300 LPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEG 359
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ G K N+ V + +LD+Y KCG + +A ++FE +ER+D VSWNA+I
Sbjct: 360 IQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQN 419
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
+ LF SM+R M+PD FT GS+++A G L ++IH IIK G+ +
Sbjct: 420 EEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVG 479
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
+L+D+Y K G + A +++ + + +S ++ISGF+ S+ A F M+ +M
Sbjct: 480 SALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFS-SQKQSENAQRYFSQML--EM 536
Query: 331 GI--DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
GI D+ +L++CAN+A++ LG+QIHA K Q D + + L+DMY+K G + D+
Sbjct: 537 GIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDS 596
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
F++ ++ ++W+++I YA HG G +AI L+++M+ + PN F+S+L AC+H
Sbjct: 597 RLMFEKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHM 656
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
G +G F M++ Y + P+ EH+SC+VDL R GQ+ A +I M + +W
Sbjct: 657 GYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRT 716
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L C + GN + E A +L ++P+ S YV+L+N+Y G W K R +M+ L
Sbjct: 717 LLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYAIVGMWGEVAKMRSIMKNCKL 776
Query: 569 RKNPGYSFLQ 578
+K PG S+++
Sbjct: 777 KKEPGCSWIE 786
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 143/504 (28%), Positives = 258/504 (51%), Gaps = 9/504 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D +T+ +L+ C + +H I G+E+++ + ++ Y+K + A + F
Sbjct: 137 DYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVF 196
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
MPERN+V W+A+I+GY QN L +F ML+ G+ +Q TY+S R+CA + +
Sbjct: 197 REMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFK 256
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G + G K F + + +A LD+YAKC + DAW +F + S+NA+I G A
Sbjct: 257 LGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYA 316
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTL-GSILRASVGGIELMKISQIHDLIIKLGLESSN 267
Q + +F+S+ R + D +L G++ SV L I Q+H L +K GL +
Sbjct: 317 RQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGI-QLHGLAVKCGLGFNI 375
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ +++D+Y K G++ A ++ M + D +S A+I+ +++ K LF M+
Sbjct: 376 CVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVK-TLSLFVSMLR 434
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
M DD ++ CA +LN G +IH K D VG+AL+DMY K G + +
Sbjct: 435 STMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLME 494
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A + + +K +SW S+I+G++ A + +M G++P++ T+ ++L C++
Sbjct: 495 AEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCAN 554
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
G ++ ++ K ++ S +VD++++ G ++ + M + + + WS
Sbjct: 555 MATIELGKQIHAQIL-KLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVT-WS 612
Query: 508 AILGACSIYGNTSLGELAARNLFD 531
A++ A + +G LGE A NLF+
Sbjct: 613 AMICAYAYHG---LGE-KAINLFE 632
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 146/608 (24%), Positives = 282/608 (46%), Gaps = 76/608 (12%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAK-------------- 77
T+ +LQ C + KA +H +I G+ ++++ ++ FY K
Sbjct: 8 TFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRM 67
Query: 78 -----------------VGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+G++ A+ FD MPER+VVSW +++S Y NG + ++ +F
Sbjct: 68 PQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKC 179
M + + T++ L+AC+ + G + +IQ G F ++ SAL+D+Y+KC
Sbjct: 128 RMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMG-FENDVVTGSALVDMYSKC 186
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
++DA+ +F + +++V W+A+I G + LF+ M++ GM T S+
Sbjct: 187 KKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVF 246
Query: 240 RASVGGIELMKI-SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
R S G+ K+ +Q+H +K + + + +D+YAK + A++++ ++
Sbjct: 247 R-SCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPR 305
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
S A+I G+AR D K A D+F+ + +G D++ L L C+ + G Q+H
Sbjct: 306 QSYNAIIVGYARQDQGLK-ALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHG 364
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHE 418
A K ++ V N ++DMY K G + +A F+EM ++ +SW ++IA + ++ +
Sbjct: 365 LAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVK 424
Query: 419 AIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWEL------------------FTD 460
+ L+ M M P+D T+ S++ AC+ G E+ D
Sbjct: 425 TLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVD 484
Query: 461 MINKYRILPRAEH------------FSCVVDLFARRGQLESA---YNMIRQMNIKPTASL 505
M K +L AE ++ ++ F+ + Q E+A ++ + +M I P
Sbjct: 485 MYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYT 544
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYV--VLSNIYTAAGAWDNARKTRKLM 563
++ +L C+ LG+ + ++ V Y+ L ++Y+ G ++R LM
Sbjct: 545 YATVLDVCANMATIELGKQIHAQILKLQLHSDV-YIASTLVDMYSKCGNMQDSR----LM 599
Query: 564 EERSLRKN 571
E++ +++
Sbjct: 600 FEKAPKRD 607
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 202/417 (48%), Gaps = 42/417 (10%)
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE 190
+ T+S L+ C+ ++ L G+ + + FV ++V + LL Y K + A+ +F+
Sbjct: 6 KLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFD 65
Query: 191 RIERKDVVSWNAMIGGLA-------------------------------MQGFNDDSFWL 219
R+ ++DV+SWN +I G A G N S +
Sbjct: 66 RMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEI 125
Query: 220 FRSMMRQGMKPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLGLESSNKLTGSLIDVYA 278
F M + D T IL+A GIE + Q+H L I++G E+ +L+D+Y+
Sbjct: 126 FVRMRSLKIPHDYATFAVILKA-CSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYS 184
Query: 279 KYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILC 338
K + A++++R M + +++ +A+I+G+ ++D E LFKDM+ MG+
Sbjct: 185 KCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFI-EGLKLFKDMLKVGMGVSQSTYA 243
Query: 339 LMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK 398
+ CA +++ LG Q+H A K +YD+ +G A +DMYAK + DA + F+ + +
Sbjct: 244 SVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNP 303
Query: 399 NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELF 458
S+ ++I GYA+ G +A+++++ ++ + ++++ L ACS EG +L
Sbjct: 304 PRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLH 363
Query: 459 TDMIN---KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
+ + I + ++D++ + G L A + +M + S W+AI+ A
Sbjct: 364 GLAVKCGLGFNICVA----NTILDMYGKCGALMEACLIFEEMERRDAVS-WNAIIAA 415
>gi|357129835|ref|XP_003566566.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g05340-like [Brachypodium distachyon]
Length = 614
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 202/574 (35%), Positives = 302/574 (52%), Gaps = 23/574 (4%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYE---SNLHLSTKVII--------F 74
LLD + LL C R +H I+ N L S + ++
Sbjct: 5 ALLDYAYLSGLLSRCGRAADHRLGAALHVTIVKNPSHFLLCPLRPSLRHVLVAWNALVSM 64
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR------ 128
YA+ G A + FD M R+ VSW ++I E+AL F MLRS
Sbjct: 65 YARCGRHAEAARVFDEMRIRDSVSWNSLIGSSGA----EDALSQFRRMLRSSSSPGGGVS 120
Query: 129 ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWIL 188
+ T+++ L ACAR L M+ G + F + V +AL+ Y +C A
Sbjct: 121 CDHATFTTVLSACAREASLPTCAMVHGLVVSRGFEAEVSVGNALVTAYFECESPGSAERA 180
Query: 189 FERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIEL 248
F + ++V++W AMI G+A + DS LF+ M R+ + + T S L A G + L
Sbjct: 181 FHGMAERNVITWTAMISGMAREELYKDSIVLFQQM-RRTVDANSATYSSSLLACAGSLAL 239
Query: 249 MKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGF 308
+ QIH L++K GLE+ + L+D+Y+K G + ++R + D IS T ++ GF
Sbjct: 240 KEGQQIHGLVVKAGLETDLHVESGLMDLYSKCGLMEDTLSVFRLCRQPDEISLTVILVGF 299
Query: 309 ARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYD 368
A++ K AF+LF +M + + ID ++ +L A LG+QIHA K +
Sbjct: 300 AQNGLEEK-AFELFAEMAGEGILIDTNMVSAVLGAFGASAPFALGKQIHALVIKKCFGRN 358
Query: 369 AAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKH 428
V N LI+MY+K GE+ ++ + F+E KN ISW S+IA +A+HG G E +L++ MK
Sbjct: 359 IYVCNGLINMYSKCGELEESIQVFNETPSKNSISWNSIIAAFARHGQGSEVFKLFESMKA 418
Query: 429 EGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLE 488
+G P DVTFLSLL CSH G +G E+ M ++Y ILPR EH++CVVD+ R G LE
Sbjct: 419 DGANPTDVTFLSLLHGCSHVGSAKKGLEILNSMSSEYGILPRVEHYACVVDMLGRAGLLE 478
Query: 489 SAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYT 548
A + I K +A LW A++GACS GN+ +G+ AA L ++P+ YV+LSNIY+
Sbjct: 479 DARSFIEDGPFKDSALLWQALMGACSFRGNSEIGKYAAEKLLHLDPDSPAAYVLLSNIYS 538
Query: 549 AAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+ G WD+ + K M E LRK+ G S+++ K+
Sbjct: 539 SEGRWDDRARVMKSMREMGLRKDTGKSWIELEKE 572
>gi|356533824|ref|XP_003535458.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 630
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 191/567 (33%), Positives = 316/567 (55%), Gaps = 15/567 (2%)
Query: 30 PSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFD 89
P + + LLQ CID ++++ A HA I+ NG+ N L+T+++ YA G++ ++R F+
Sbjct: 28 PQSLLHLLQLCIDLRSQKLAQQSHAQILANGFAQNAFLATRLVSAYATCGELATSRFVFE 87
Query: 90 RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG 149
+ ++V W ++I+GY +N AL +F M R+G+ + +T ++ + + L
Sbjct: 88 SVEAKSVYLWNSLINGYVKNHDFRQALALFREMGRNGMLPDDYTLATVFKVFGELEDLVS 147
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA- 208
G++I G + FV ++ V ++L+ +Y +CG DA +F+ ++V S+N +I G A
Sbjct: 148 GKLIHGKGIRIGFVSDVVVGNSLMSMYCRCGEFGDAVKVFDETPHRNVGSFNVVISGCAA 207
Query: 209 MQGFN----DDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLGL 263
++ N DD F M +G K D FT+ S+L G ++H ++K GL
Sbjct: 208 LENCNFTSHDDLSNFFLRMQCEGFKADAFTVASLLPVCCGDTGKWDYGRELHCYVVKNGL 267
Query: 264 E----SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
+ S L SLID+Y++ + +++ M ++ TA+I+G+ ++ +A
Sbjct: 268 DLKMDSDVHLGSSLIDMYSRSKKVVLGRRVFDQMKNRNVYVWTAMINGYVQN-GAPDDAL 326
Query: 320 DLFKDMILKKMGI--DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
L + M +K GI + V L L C +A L G+QIH F+ K + + D ++ NALID
Sbjct: 327 VLLRAMQMKD-GIRPNKVSLISALPACGLLAGLIGGKQIHGFSIKMELNDDVSLCNALID 385
Query: 378 MYAKSGEIADANRAFDEMGD-KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDV 436
MY+K G + A RAF+ K+ I+W+S+I+ Y HG G EAI Y KM +G P+ +
Sbjct: 386 MYSKCGSLDYARRAFETSSYFKDAITWSSMISAYGLHGRGEEAIIAYYKMLQQGFKPDMI 445
Query: 437 TFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQ 496
T + +L ACS +GL EG ++ ++ KY I P E +CVVD+ R GQL+ A I++
Sbjct: 446 TVVGVLSACSKSGLVDEGISIYKSLMTKYEIKPTVEICACVVDMLGRSGQLDQALEFIKE 505
Query: 497 MNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNA 556
M + P S+W ++L A I+GN+ +LA R+L ++EPE NY+ LSN Y + WD
Sbjct: 506 MPLDPGPSVWGSLLTASVIHGNSRTRDLAYRHLLELEPENPSNYISLSNTYASDRRWDVV 565
Query: 557 RKTRKLMEERSLRKNPGYSFLQSSKKN 583
+ R +M+ER L+K PG S++ S K
Sbjct: 566 TEVRTIMKERGLKKVPGCSWITISGKT 592
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 188/602 (31%), Positives = 322/602 (53%), Gaps = 42/602 (6%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L + S + LL C+ ++ R L+HA I+ + + + ++I Y K + ARK
Sbjct: 12 LPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARK 71
Query: 87 AFDRMPERNV-------------------------------VSWTAMISGYAQNGYDENA 115
FDRMP+RN SW +M+SG+AQ+ E +
Sbjct: 72 LFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEES 131
Query: 116 LLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDL 175
L F M R N++++ SAL ACA + L G + + K R+ ++++ SAL+D+
Sbjct: 132 LEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDM 191
Query: 176 YAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTL 235
Y+KCG + A +F + +++V+WN++I G ++ +F MM G++PD TL
Sbjct: 192 YSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTL 251
Query: 236 GSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG-SLIDVYAKYGSIRSAYQLYRSML 294
S++ A L + QIH ++K + + G +L+D+YAK + A +++ M
Sbjct: 252 ASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMS 311
Query: 295 KTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGR 354
+++S T+++SG+AR + K A +F M + + + ++ N +L L R
Sbjct: 312 IRNVVSETSMVSGYARAAS-VKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFR 370
Query: 355 QIH-------AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI 407
+ + F D VGN+LIDMY K G I D +R F++M +++ +SW ++I
Sbjct: 371 LLKRESIWPTHYTFGNLLKSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAII 430
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRI 467
GYA++GYG EA+++++KM G P+ VT + +L ACSH GL EG F M ++ +
Sbjct: 431 VGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSM-EEHGL 489
Query: 468 LPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAAR 527
+P +H++C+VDL R G L A N+I M + P A +W ++L AC ++GN +G+ AA
Sbjct: 490 IPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAE 549
Query: 528 NLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ-SSKKNILL 586
L +++P S YV+LSN+Y G W + + RKLM ++ + K PG S+++ S+ ++ L
Sbjct: 550 KLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFL 609
Query: 587 LE 588
++
Sbjct: 610 VK 611
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 205/426 (48%), Gaps = 64/426 (15%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
D LL+ ++ S L C +HA + + Y +++++ + +I Y+K G V A
Sbjct: 142 DFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACA 201
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
+ F M ERN+V+W ++I+ Y QNG AL VF M+ SG+ ++ T +S + ACA +
Sbjct: 202 EEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASL 261
Query: 145 RWLQGGRMIQGSIQK-GRFVENLFVKSALLDLYAKCGWIEDAWILFERIE---------- 193
L+ G I + K +F ++L + +AL+D+YAKC + +A +F+R+
Sbjct: 262 CALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSM 321
Query: 194 ---------------------RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDC 232
+++VVSWNA+I G G N+++ LFR + R+ + P
Sbjct: 322 VSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTH 381
Query: 233 FTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRS 292
+T G++L++ + + SLID+Y K GSI +++
Sbjct: 382 YTFGNLLKSDIF------------------------VGNSLIDMYMKCGSIEDGSRVFEK 417
Query: 293 MLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNL 352
M + D +S A+I G+A+ + + EA +F+ M++ D V + +L C++ +
Sbjct: 418 MKERDCVSWNAIIVGYAQ-NGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEE 476
Query: 353 GRQIHAFAFKYQSSYDAAVGN---ALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIA 408
GR H F F + + + ++D+ ++G + +A + M + + + W SL+A
Sbjct: 477 GR--HYF-FSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLA 533
Query: 409 GYAKHG 414
HG
Sbjct: 534 ACKVHG 539
>gi|255559012|ref|XP_002520529.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540371|gb|EEF41942.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 189/557 (33%), Positives = 303/557 (54%), Gaps = 26/557 (4%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
+P ++ FC + +H+ II G+ SN+H+ + V+ YAK ++ SA + F
Sbjct: 68 NPYFINKVVSFCAKFASYDLGIQLHSTIIRMGFTSNVHICSAVVDMYAKCSEIQSAHEVF 127
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ MPERN V+W ++I GY L V GV + F+ S+ L C+++
Sbjct: 128 NEMPERNDVTWNSLIFGY---------LNVMPTCAMRGVTS--FSVSTCLVVCSQLEVRN 176
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G + G K F N+FV +AL+D+Y+KC ++D+W +F+ + K+VV+W AM+ A
Sbjct: 177 FGAQVHGLSLKLGFDNNVFVGTALIDMYSKCDGVDDSWRVFDYMVDKNVVTWTAMVTAYA 236
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
D++ L R MMR G+K + T S+L + G + Q+H II+ GLE +
Sbjct: 237 QNEQPDEAMILVREMMRLGIKANYVTYNSLLSSFSGPKYMQYCKQVHCSIIRCGLECNLY 296
Query: 269 LTGSLIDVYAK-------YGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDL 321
+ +L+ VY+K + I S QL +D IS A+I+G++ + ++A
Sbjct: 297 IAATLVTVYSKCTNNLEDFNKISSGVQL------SDQISWNAVIAGYS-NLGLGEDALKC 349
Query: 322 FKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
F +M + +D +L ++ GR++HA K + V N L+ MYA+
Sbjct: 350 FCEMRHANIKMDFYTFTSLLGAIGAFLAIEEGREMHALIVKTGYASSVYVQNGLVSMYAR 409
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
G I D+ R F M D +V+SW +L+ G A HG+G+EA+EL+++M+ + PN TFL++
Sbjct: 410 CGAIDDSKRVFWLMEDHDVVSWNALLTGCAHHGFGNEAVELFEQMRKTKIKPNSTTFLAV 469
Query: 442 LFACSHTGLTCEGWELFTDMINKYRILP-RAEHFSCVVDLFARRGQLESAYNMIRQMNIK 500
L ACSH G +G E F M + + P R EH++ VVD+F R G L A +I M +
Sbjct: 470 LSACSHVGSVDKGLEYFDFMRSDISLEPLRVEHYASVVDIFGRAGYLSEAEAIINCMPMD 529
Query: 501 PTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTR 560
P S++ A+L AC ++GN + +AR L ++ P+ Y++LSN+ G WD+A R
Sbjct: 530 PGPSVYKALLSACLVHGNREIAVRSARKLLELWPDDPATYILLSNMLATEGYWDDAADVR 589
Query: 561 KLMEERSLRKNPGYSFL 577
KLM +R +RKNPGYS++
Sbjct: 590 KLMCDRGVRKNPGYSWI 606
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/507 (22%), Positives = 227/507 (44%), Gaps = 70/507 (13%)
Query: 118 VFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYA 177
+F+ +LR+G +N + + + CA+ G + +I + F N+ + SA++D+YA
Sbjct: 56 LFAHLLRNGSFSNPYFINKVVSFCAKFASYDLGIQLHSTIIRMGFTSNVHICSAVVDMYA 115
Query: 178 KCGWIEDAWILFERIERKDVVSWNAMIGG-------LAMQGFNDDSFWLFRSMMRQGMKP 230
KC I+ A +F + ++ V+WN++I G AM+G S
Sbjct: 116 KCSEIQSAHEVFNEMPERNDVTWNSLIFGYLNVMPTCAMRGVTSFSV------------S 163
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
C + S L G +Q+H L +KLG +++ + +LID+Y+K + +++++
Sbjct: 164 TCLVVCSQLEVRNFG------AQVHGLSLKLGFDNNVFVGTALIDMYSKCDGVDDSWRVF 217
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
M+ ++++ TA+++ +A+++ EA L ++M+ + + V +L+ + +
Sbjct: 218 DYMVDKNVVTWTAMVTAYAQNE-QPDEAMILVREMMRLGIKANYVTYNSLLSSFSGPKYM 276
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAK-SGEIADANRAFDEMGDKNVISWTSLIAG 409
+Q+H + + + L+ +Y+K + + D N+ + + ISW ++IAG
Sbjct: 277 QYCKQVHCSIIRCGLECNLYIAATLVTVYSKCTNNLEDFNKISSGVQLSDQISWNAVIAG 336
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
Y+ G G +A++ + +M+H + + TF SLL A EG E+ +I K
Sbjct: 337 YSNLGLGEDALKCFCEMRHANIKMDFYTFTSLLGAIGAFLAIEEGREMHA-LIVKTGYAS 395
Query: 470 RAEHFSCVVDLFARRGQLESA----------------------------------YNMIR 495
+ +V ++AR G ++ + + +R
Sbjct: 396 SVYVQNGLVSMYARCGAIDDSKRVFWLMEDHDVVSWNALLTGCAHHGFGNEAVELFEQMR 455
Query: 496 QMNIKPTASLWSAILGACSIYGNTSLGELA---ARNLFDMEPEKSVNYVVLSNIYTAAGA 552
+ IKP ++ + A+L ACS G+ G R+ +EP + +Y + +I+ AG
Sbjct: 456 KTKIKPNSTTFLAVLSACSHVGSVDKGLEYFDFMRSDISLEPLRVEHYASVVDIFGRAGY 515
Query: 553 WDNARKTRKLMEERSLRKNPGYSFLQS 579
A M +PG S ++
Sbjct: 516 LSEAEAIINCMP-----MDPGPSVYKA 537
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 53/91 (58%)
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMY 379
DLF ++ + + +++ CA AS +LG Q+H+ + + + + +A++DMY
Sbjct: 55 DLFAHLLRNGSFSNPYFINKVVSFCAKFASYDLGIQLHSTIIRMGFTSNVHICSAVVDMY 114
Query: 380 AKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
AK EI A+ F+EM ++N ++W SLI GY
Sbjct: 115 AKCSEIQSAHEVFNEMPERNDVTWNSLIFGY 145
>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 176/555 (31%), Positives = 303/555 (54%), Gaps = 5/555 (0%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L+ T ++L+ C R +H + + G++S+L +S + Y K G + A
Sbjct: 143 LVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGL 202
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
AFD++ +++V+W MI+GYAQN Y+E A+ +F M G + N T+ L+A M
Sbjct: 203 AFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMSD 262
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
GR + K ++FV +AL+D+Y+K IED F + ++++VS+NA+I G
Sbjct: 263 SAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITG 322
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
++ G +++ ++ + +GM+PD FT + + + + +Q+H +K GL+S
Sbjct: 323 YSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSD 382
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ S+++ Y+K G SA + + S+ + + + +ISGFA++ K K
Sbjct: 383 VSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGIISGFAQNGEGEKALMQFCK--- 439
Query: 327 LKKM--GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
++K D+ ++ ++ A++ GR +HA K VG+A+IDMY+K G
Sbjct: 440 MRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDCTIYVGSAVIDMYSKCGM 499
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ DA + F M +KNV+SW S+I GYA++G+ EA+ L+++M G++P VTF+ +LFA
Sbjct: 500 VEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGILPTAVTFVGILFA 559
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
CSH GL EG + M++ Y I P EH +C+VDL R G LE A + +
Sbjct: 560 CSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGRAGYLEEAEAFLLSSSFSKEPG 619
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
+W ++L AC ++ N+ +G AA++ +EP S +Y LSNIY + W + R LM+
Sbjct: 620 IWGSLLSACGVHKNSDVGSRAAQHCLFLEPHYSSSYTALSNIYASKELWSEVSRIRDLMK 679
Query: 565 ERSLRKNPGYSFLQS 579
+ + K PG S+++S
Sbjct: 680 DMGVEKEPGCSWIES 694
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 149/484 (30%), Positives = 248/484 (51%), Gaps = 25/484 (5%)
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
M E NVV WT+ I+ A+ G + AL F MLR+G+ N TYS+ + ACA+
Sbjct: 1 MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ I K F LFV S L+ +Y+K I++A LF+ + +D VSWN+MI G + +
Sbjct: 61 TSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQR 120
Query: 211 GFNDDSFWLFRSMMRQG-----MKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLE 264
G N+++ LF SM+ + D FTL ++L+A GG+ +I + +H +K+G +
Sbjct: 121 GLNEEACGLFCSMINSCENWKLLVSD-FTLATVLKA-CGGLGCSRIGKCVHGYAVKIGFD 178
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
S ++GS + +Y K G + A + + DI++ +I+G+A+ + + +EA +LF
Sbjct: 179 SDLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQ-NCYEEEAIELFYQ 237
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M L+ +D C +L ++ +GR HA K S D V AL+DMY+K +
Sbjct: 238 MELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYD 297
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
I D RAF EM +N++S+ +LI GY+ G EA+ +Y +++ EGM P+ TF+ L +
Sbjct: 298 IEDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSS 357
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
CS + EG ++ + K+ + + +V+ +++ G +SA +N +P +
Sbjct: 358 CSVSSTVAEGAQVHVHSV-KFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESIN-RPNSV 415
Query: 505 LWSAILGACSIYGNTSLGELA------ARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARK 558
W+ I+ S + GE A R D E S S++ A +W +
Sbjct: 416 CWAGII---SGFAQNGEGEKALMQFCKMRKFIDKTDEFSS-----SSVIKAVSSWAAVEQ 467
Query: 559 TRKL 562
R L
Sbjct: 468 GRHL 471
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 146/522 (27%), Positives = 265/522 (50%), Gaps = 14/522 (2%)
Query: 2 NIVR------ANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIH 53
N+VR N + G + QAL L ++P+ TY + + C A +H
Sbjct: 5 NVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLATSLH 64
Query: 54 AHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDE 113
I+ G+ + L +S+ +I Y+K + AR FD MPER+ VSW +MI+GY+Q G +E
Sbjct: 65 CLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGLNE 124
Query: 114 NALLVFSAMLRS----GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK 169
A +F +M+ S + + FT ++ L+AC + + G+ + G K F +LFV
Sbjct: 125 EACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVS 184
Query: 170 SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
+ + +Y KCG ++ A + F++IE KD+V+WN MI G A + +++ LF M +G K
Sbjct: 185 GSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFK 244
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
P+ T +L+AS + H ++KLG + +L+D+Y+K+ I +
Sbjct: 245 PNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERA 304
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ M K +++S ALI+G++ + +EA ++ + + M D + + C+ ++
Sbjct: 305 FGEMSKRNLVSFNALITGYSLMGKY-EEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSST 363
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
+ G Q+H + K+ D +VGN++++ Y+K G A AF+ + N + W +I+G
Sbjct: 364 VAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGIISG 423
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
+A++G G +A+ + KM+ ++ + S++ A S +G L ++ K +
Sbjct: 424 FAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVM-KSGLDC 482
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
S V+D++++ G +E A + M K S S I G
Sbjct: 483 TIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITG 524
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 180/551 (32%), Positives = 296/551 (53%), Gaps = 1/551 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L+P + S L+ + +H+ I+ GY+SN + +I Y+ G V SAR
Sbjct: 144 LNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTV 203
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F+ + +++V W ++S Y +NGY E++L + S M +G N +T+ +AL+A +
Sbjct: 204 FEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAF 263
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ + G I K +V + V LL LY + G + DA+ +F + + DVV W+ MI
Sbjct: 264 DFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARF 323
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
GF +++ LF M + P+ FTL SIL G Q+H L++K+G +
Sbjct: 324 CQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDI 383
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
++ +LIDVYAK + +A +L+ + + +S +I G+ + +AF +F++ +
Sbjct: 384 YVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGY-ENLGEGGKAFSMFREALR 442
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
++ + +V L CA++AS++LG Q+H A K ++ AV N+LIDMYAK G+I
Sbjct: 443 NQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKF 502
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A F+EM +V SW +LI+GY+ HG G +A+ + MK PN +TFL +L CS+
Sbjct: 503 AQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSN 562
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
GL +G E F MI + I P EH++C+V L R GQL+ A +I + +P+ +W
Sbjct: 563 AGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWR 622
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
A+L A N +A + + P+ YV++SN+Y A W N RK M+E
Sbjct: 623 AMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMG 682
Query: 568 LRKNPGYSFLQ 578
++K PG S+++
Sbjct: 683 VKKEPGLSWIE 693
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 143/507 (28%), Positives = 242/507 (47%), Gaps = 20/507 (3%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD Y ++L+ CI K A IH I+ G +L + ++ Y K G A
Sbjct: 47 LDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD MPERN VS+ + GYA ++ + ++S + R G N ++S L+ +
Sbjct: 107 FDEMPERNNVSFVTLAQGYAC----QDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKA 162
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ + I K + N FV +AL++ Y+ CG ++ A +FE I KD+V W ++
Sbjct: 163 EICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCY 222
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
G+ +DS L M G P+ +T + L+AS+G +H I+K
Sbjct: 223 VENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDP 282
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
++ L+ +Y + G + A++++ M K D++ + +I+ F + + EA DLF M
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQ-NGFCNEAVDLFIRMRE 341
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ ++ L +LN CA LG Q+H K D V NALID+YAK ++
Sbjct: 342 AFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDT 401
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS- 446
A + F E+ KN +SW ++I GY G G +A ++++ + +VTF S L AC+
Sbjct: 402 AVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACAS 461
Query: 447 ----HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
G+ G + T+ K + + ++D++A+ G ++ A ++ +M
Sbjct: 462 LASMDLGVQVHGLAIKTNNAKKVAV------SNSLIDMYAKCGDIKFAQSVFNEMETIDV 515
Query: 503 ASLWSAILGACSIYGNTSLGELAARNL 529
AS W+A++ S +G LG A R L
Sbjct: 516 AS-WNALISGYSTHG---LGRQALRIL 538
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
G+D ML C + IH K S D N L++ Y K+G DA
Sbjct: 46 GLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALN 105
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
FDEM ++N +S+ +L GYA + I LY ++ EG N F S L
Sbjct: 106 LFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFL 153
>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 833
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 179/531 (33%), Positives = 294/531 (55%), Gaps = 1/531 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H I G+E + ++ T ++ Y K + SA K F+ +P++ + W A+IS Y NGY
Sbjct: 263 VHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGY 322
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+AL ++ M V ++ FT + L + + GR+I I K ++ ++SA
Sbjct: 323 AYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSA 382
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
LL +Y+K G A +F ++ +DVV+W ++I G ++ FR+M +KPD
Sbjct: 383 LLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPD 442
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
+ SI+ A G ++ IH +IK GL+ + SL+D+Y+K+G A ++
Sbjct: 443 SDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFS 502
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
M ++++ ++IS + R+ N + +LF ++ + D V +L ++VA+L
Sbjct: 503 DMPLKNLVAWNSIISCYCRN-NLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALL 561
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
G+ +H + + +D V N LIDMY K G + A F+ + +KN+++W S+I GY
Sbjct: 562 KGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYG 621
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
HG +AIEL+ +M+ G+ P+DVTFLSLL +C+H+GL EG LF M K+ I PR
Sbjct: 622 SHGECSKAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIEPRM 681
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
EH+ +VDL+ R G L AY+ ++ M ++P S+W ++L +C I+ N LGE+ A L +
Sbjct: 682 EHYVNIVDLYGRAGCLGDAYSFVKNMPVEPDRSIWLSLLCSCKIHLNLELGEMVANKLLN 741
Query: 532 MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
MEP K NYV L N+Y A WD R M+E+ L+K PG S+++ K
Sbjct: 742 MEPSKGSNYVQLLNLYGEAELWDRTANLRASMKEKGLKKTPGCSWIEVRNK 792
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 131/488 (26%), Positives = 253/488 (51%), Gaps = 12/488 (2%)
Query: 47 RQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER-NVVSWTAMISG 105
++ IH++I+ N + L T +I Y K G AR F ++ +R N+V+W MI G
Sbjct: 156 KEGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGG 215
Query: 106 YAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVEN 165
+ +NG EN+L + V+ +++ L AC + ++ G+ + K F ++
Sbjct: 216 FGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDD 275
Query: 166 LFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR 225
+V ++LL +Y KC IE A +F + K++ WNA+I G+ D+ +++ M
Sbjct: 276 PYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKL 335
Query: 226 QGMKPDCFTLGSILRAS--VGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
+ D FT+ ++L +S G +L ++ IH I+K L+SS + +L+ +Y+K+G
Sbjct: 336 CTVLSDSFTILNVLTSSSMAGLYDLGRL--IHTEIVKRPLQSSITIQSALLTMYSKFGDS 393
Query: 284 RSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNI 343
A ++ +M + D+++ ++ISGF ++ + KEA D F+ M + D I+ +++
Sbjct: 394 NYANSIFSTMKERDVVAWGSVISGFCQNRKY-KEALDFFRAMEADLVKPDSDIMASIISA 452
Query: 344 CANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISW 403
C + ++LG IH F K D V ++L+DMY+K G A F +M KN+++W
Sbjct: 453 CTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAW 512
Query: 404 TSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMIN 463
S+I+ Y ++ +I L+ ++ + P+ V+F S+L A S +G + ++
Sbjct: 513 NSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVR 572
Query: 464 KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGE 523
+ I + + ++D++ + G L+ A ++ +++ K + W++++G +G S
Sbjct: 573 LW-IPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVA-WNSMIGGYGSHGECS--- 627
Query: 524 LAARNLFD 531
A LFD
Sbjct: 628 -KAIELFD 634
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 145/567 (25%), Positives = 264/567 (46%), Gaps = 54/567 (9%)
Query: 4 VRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYES 63
+++ + Q +ALK P TY SLL+ C + IH+ IIT G S
Sbjct: 28 IKSLVQQRQYIEALKLYTKSP-VYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGLHS 86
Query: 64 NLHLSTKVIIFYAKVGDVLSARKAFDRMPER-----NVVSWTAMISGYAQNGYDENALLV 118
+ ++++ +I Y K G A K FD++P+ +V W ++I GY + G E ++
Sbjct: 87 DQYITSSLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQ 146
Query: 119 FSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
F M SG + G+ I I + + F+++AL+D Y K
Sbjct: 147 FGRMQSSGYKE--------------------GKQIHSYIVRNMLNFDPFLETALIDTYFK 186
Query: 179 CGWIEDAWILFERI-ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGS 237
CG +A LF+++ +R ++V+WN MIGG G ++S + + +K +
Sbjct: 187 CGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTC 246
Query: 238 ILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
L A G + Q+H IK+G E + SL+ +Y K I SA +++ + +
Sbjct: 247 TLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKE 306
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
I ALIS + + ++ +A ++K M L + D + +L + +LGR IH
Sbjct: 307 IELWNALISAYV-GNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIH 365
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
K + +AL+ MY+K G+ AN F M +++V++W S+I+G+ ++
Sbjct: 366 TEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYK 425
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACS-----HTGLTCEGWELFTDMINKYRILPRAE 472
EA++ ++ M+ + + P+ S++ AC+ G T G+ + + + + +
Sbjct: 426 EALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGL--------QLD 477
Query: 473 HF--SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
F S ++D++++ G E A N+ M +K + W++I+ S Y +L +L+ NLF
Sbjct: 478 VFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVA-WNSII---SCYCRNNLPDLSI-NLF 532
Query: 531 ------DMEPEKSVNYVVLSNIYTAAG 551
D+ P+ VL+ I + A
Sbjct: 533 SQVLRNDLYPDSVSFTSVLAAISSVAA 559
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 185/373 (49%), Gaps = 15/373 (4%)
Query: 49 AHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQ 108
LIH I+ +S++ + + ++ Y+K GD A F M ER+VV+W ++ISG+ Q
Sbjct: 361 GRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQ 420
Query: 109 NGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFV 168
N + AL F AM V+ + +S + AC + + G I G + K ++FV
Sbjct: 421 NRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFV 480
Query: 169 KSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGM 228
S+LLD+Y+K G+ E A +F + K++V+WN++I D S LF ++R +
Sbjct: 481 ASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDL 540
Query: 229 KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQ 288
PD + S+L A L+K +H +++L + ++ +LID+Y K G ++ A
Sbjct: 541 YPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQH 600
Query: 289 LYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
++ + + ++++ ++I G+ SK A +LF +M + DDV +L+ C +
Sbjct: 601 IFERISEKNLVAWNSMIGGYGSHGECSK-AIELFDEMRSSGIKPDDVTFLSLLSSCNHSG 659
Query: 349 SLNLGRQIHAFA-----FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEM---GDKNV 400
+ G +H F F + + V ++D+Y ++G + DA M D+++
Sbjct: 660 LIEEG--LHLFEMMKMKFGIEPRMEHYVN--IVDLYGRAGCLGDAYSFVKNMPVEPDRSI 715
Query: 401 ISWTSLIAGYAKH 413
W SL+ H
Sbjct: 716 --WLSLLCSCKIH 726
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 152/285 (53%), Gaps = 3/285 (1%)
Query: 12 QLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLST 69
+ K+AL F + L+ P + + S++ C + IH +I +G + ++ +++
Sbjct: 423 KYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVAS 482
Query: 70 KVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA 129
++ Y+K G A F MP +N+V+W ++IS Y +N + ++ +FS +LR+ +
Sbjct: 483 SLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYP 542
Query: 130 NQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILF 189
+ +++S L A + + L G+ + G + + +L V++ L+D+Y KCG ++ A +F
Sbjct: 543 DSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIF 602
Query: 190 ERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIEL 248
ERI K++V+WN+MIGG G + LF M G+KPD T S+L + + G+
Sbjct: 603 ERISEKNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIE 662
Query: 249 MKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ + +K G+E + +++D+Y + G + AY ++M
Sbjct: 663 EGLHLFEMMKMKFGIEPRMEHYVNIVDLYGRAGCLGDAYSFVKNM 707
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 196/603 (32%), Positives = 317/603 (52%), Gaps = 53/603 (8%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ + + C + + R HA + G+ SN+ + ++ Y++ + ARK F
Sbjct: 126 DNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVF 185
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS-GVRANQFTYSSALRACARMRWL 147
D M +VVSW ++I YA+ G + AL +FS M G R + T + L CA +
Sbjct: 186 DEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTH 245
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ + ++N+FV + L+D+YAKCG +++A +F + KDVVSWNAM+ G
Sbjct: 246 SLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGY 305
Query: 208 AMQGFNDDSFWLF-----------------------------------RSMMRQGMKPDC 232
+ G +D+ LF R M+ G+KP+
Sbjct: 306 SQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNE 365
Query: 233 FTLGSILR--ASVGGIELMKISQIHDLIIKLGLE-------SSNKLTGSLIDVYAKYGSI 283
TL S+L ASVG LM +IH IK ++ N + LID+YAK +
Sbjct: 366 VTLISVLSGCASVGA--LMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKV 423
Query: 284 RSAYQLYRSM--LKTDIISCTALISGFARDDNHSKEAFDLFKDMILK--KMGIDDVILCL 339
+A ++ S+ + D+++ T +I G+++ + +K A +L +M + + + +
Sbjct: 424 DTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANK-ALELLSEMFEEDCQTRPNAFTISC 482
Query: 340 MLNICANVASLNLGRQIHAFAFK-YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK 398
L CA++A+L +G+QIHA+A + Q++ V N LIDMYAK G I+DA FD M K
Sbjct: 483 ALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAK 542
Query: 399 NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELF 458
N ++WTSL+ GY HGYG EA+ ++ +M+ G + VT L +L+ACSH+G+ +G E F
Sbjct: 543 NEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYF 602
Query: 459 TDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
M + + P EH++C+VDL R G+L +A +I +M ++P +W A L C I+G
Sbjct: 603 NRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGK 662
Query: 519 TSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
LGE AA + ++ +Y +LSN+Y AG W + + R LM + ++K PG S+++
Sbjct: 663 VELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVE 722
Query: 579 SSK 581
K
Sbjct: 723 GIK 725
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 154/581 (26%), Positives = 265/581 (45%), Gaps = 71/581 (12%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYE 62
I A K+ Q + FS S P+ + P F K Q LIH +++ G
Sbjct: 7 IPNAAAKSHQYIKVSLFSTSAPE--ITPP-------FIHKCKTISQVKLIHQKLLSFGIL 57
Query: 63 SNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN--VVSWTAMISGYAQNGYDENALLVFS 120
+ L+L++ +I Y VG + A R P + V W ++I Y NG L +F
Sbjct: 58 T-LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFG 116
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M + +T+ +AC + ++ G F+ N+FV +AL+ +Y++C
Sbjct: 117 LMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCR 176
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ-GMKPDCFTLGSIL 239
+ DA +F+ + DVVSWN++I A G + +F M + G +PD TL ++L
Sbjct: 177 SLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVL 236
Query: 240 R--ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
AS+G L K Q+H + + + + L+D+YAK G + A ++ +M D
Sbjct: 237 PPCASLGTHSLGK--QLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKD 294
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGID------------------------ 333
++S A+++G+++ ++A LF+ M +K+ +D
Sbjct: 295 VVSWNAMVAGYSQIGRF-EDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVC 353
Query: 334 -----------DVILCLMLNICANVASLNLGRQIHAFAFKYQSSY-------DAAVGNAL 375
+V L +L+ CA+V +L G++IH +A KY + V N L
Sbjct: 354 RQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQL 413
Query: 376 IDMYAKSGEIADANRAFDEMGDK--NVISWTSLIAGYAKHGYGHEAIELYKKMKHEG--M 431
IDMYAK ++ A FD + K +V++WT +I GY++HG ++A+EL +M E
Sbjct: 414 IDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQT 473
Query: 432 VPNDVTFLSLLFACSHTGLTCEGWELFTDMI-NKYRILPRAEHFSCVVDLFARRGQLESA 490
PN T L AC+ G ++ + N+ +P +C++D++A+ G + A
Sbjct: 474 RPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS-NCLIDMYAKCGSISDA 532
Query: 491 YNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
+ M K + W++++ YG GE A +FD
Sbjct: 533 RLVFDNMMAKNEVT-WTSLMTG---YGMHGYGE-EALGIFD 568
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 205/446 (45%), Gaps = 52/446 (11%)
Query: 165 NLFVKSALLDLYAKCGWIEDAWILFERIERKD--VVSWNAMIGGLAMQGFNDDSFWLFRS 222
L + S L+ Y G + A L R D V WN++I G + +LF
Sbjct: 58 TLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGL 117
Query: 223 MMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKLTGSLIDVYAKYG 281
M PD +T + +A G I ++ + H L + G S+ + +L+ +Y++
Sbjct: 118 MHSLSWTPDNYTFPFVFKA-CGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCR 176
Query: 282 SIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI--DDVILCL 339
S+ A +++ M D++S ++I +A+ K A ++F M + G D++ L
Sbjct: 177 SLSDARKVFDEMSVWDVVSWNSIIESYAKLGK-PKVALEMFSRMT-NEFGCRPDNITLVN 234
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN 399
+L CA++ + +LG+Q+H FA + + VGN L+DMYAK G + +AN F M K+
Sbjct: 235 VLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKD 294
Query: 400 VISWTSLIAGYAKHGYGHEAIELYKKMKHE------------------------------ 429
V+SW +++AGY++ G +A+ L++KM+ E
Sbjct: 295 VVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCR 354
Query: 430 -----GMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRI-LPRAEH------FSCV 477
G+ PN+VT +S+L C+ G G E+ I KY I L + H + +
Sbjct: 355 QMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAI-KYPIDLRKNGHGDENMVINQL 413
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASL-WSAILGACSIYGNTSLGELAARNLFDMEPEK 536
+D++A+ ++++A M ++ K + W+ ++G S +G+ + +F+ + +
Sbjct: 414 IDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQT 473
Query: 537 SVNYVVLSNIYTAAGAWDNARKTRKL 562
N +S A + R +++
Sbjct: 474 RPNAFTISCALVACASLAALRIGKQI 499
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 132/512 (25%), Positives = 221/512 (43%), Gaps = 86/512 (16%)
Query: 2 NIVRANFKTGQLKQALKF------SLSC-PDTLLDPSTYMSLLQFCIDKKAERQAHLIHA 54
+I+ + K G+ K AL+ C PD + T +++L C +H
Sbjct: 198 SIIESYAKLGKPKVALEMFSRMTNEFGCRPDNI----TLVNVLPPCASLGTHSLGKQLHC 253
Query: 55 HIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAM------------ 102
+T+ N+ + ++ YAK G + A F M ++VVSW AM
Sbjct: 254 FAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFED 313
Query: 103 -----------------------ISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALR 139
ISGYAQ G AL V ML SG++ N+ T S L
Sbjct: 314 AVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLS 373
Query: 140 ACARMRWLQGGRMIQGSIQK--------GRFVENLFVKSALLDLYAKCGWIEDAWILFER 191
CA + L G+ I K G EN+ + L+D+YAKC ++ A +F+
Sbjct: 374 GCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQ-LIDMYAKCKKVDTARAMFDS 432
Query: 192 IERK--DVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG--MKPDCFTLGSILRASVGGIE 247
+ K DVV+W MIGG + G + + L M + +P+ FT+ L A
Sbjct: 433 LSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAA 492
Query: 248 LMKISQIHDLIIK-----LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCT 302
L QIH ++ + L SN LID+YAK GSI A ++ +M+ + ++ T
Sbjct: 493 LRIGKQIHAYALRNQQNAVPLFVSN----CLIDMYAKCGSISDARLVFDNMMAKNEVTWT 548
Query: 303 ALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK 362
+L++G+ + +EA +F +M +D V L ++L C++ ++ G + + +
Sbjct: 549 SLMTGYGM-HGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME---YFNR 604
Query: 363 YQSSYDAAVGN----ALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHG--- 414
++ + + G L+D+ ++G + A R +EM + + W + ++ HG
Sbjct: 605 MKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVE 664
Query: 415 YGHEAIELYKKM--KHEGMVPNDVTFLSLLFA 444
G A E ++ H+G T LS L+A
Sbjct: 665 LGEYAAEKITELASNHDG----SYTLLSNLYA 692
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 140/295 (47%), Gaps = 20/295 (6%)
Query: 250 KISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD--IISCTALISG 307
++ IH ++ G+ + N LT LI Y G + A L R +D + +LI
Sbjct: 43 QVKLIHQKLLSFGILTLN-LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRS 101
Query: 308 FARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSY 367
+ D+ + + LF M D+ + C ++S+ G HA +
Sbjct: 102 YG-DNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFIS 160
Query: 368 DAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMK 427
+ VGNAL+ MY++ ++DA + FDEM +V+SW S+I YAK G A+E++ +M
Sbjct: 161 NVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMT 220
Query: 428 HE-GMVPNDVTFLSLLFACSHTGLTCEGWELF-----TDMINKYRILPRAEHFSCVVDLF 481
+E G P+++T +++L C+ G G +L ++MI + +C+VD++
Sbjct: 221 NEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFV------GNCLVDMY 274
Query: 482 ARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEK 536
A+ G ++ A + M++K S W+A++ Y E A R M+ EK
Sbjct: 275 AKCGMMDEANTVFSNMSVKDVVS-WNAMVAG---YSQIGRFEDAVRLFEKMQEEK 325
>gi|255560101|ref|XP_002521068.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539637|gb|EEF41219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 579
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 181/529 (34%), Positives = 308/529 (58%), Gaps = 5/529 (0%)
Query: 52 IHAHIITNG-YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
IHA I+T G + ++ + ++I Y ++ +++ AR F++MP+R++ +W +MI Y++
Sbjct: 4 IHALILTTGLFFNDANSIAQLIASYGRINNIIPARNVFEKMPQRSINAWNSMIIAYSRTN 63
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
Y + L ++ M+ G++ + T++ L+AC+ + L G +I + ++FV S
Sbjct: 64 YPDEVLNLYYRMISEGIKPDSSTFTVTLKACSSLMDLDMGEIIWNQAVDFGYGFDVFVVS 123
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
++L+LYAK G ++ A I+F+++ ++DVVSW MI G A G D+ ++R+M ++ +
Sbjct: 124 SVLNLYAKSGKMDKAKIVFDKMVKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQKERTEG 183
Query: 231 DCFTLGSILRASVG-GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
D + +++A G +S +H +++ + N L SLID+YAK G + A ++
Sbjct: 184 DGVVMVGLIQACTSLGDSKFGLS-VHGHMVRREMNMDNVLQTSLIDMYAKNGKLELASRV 242
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ + +IS ALISGFA++ +K L +M D V L L+ CA V +
Sbjct: 243 FEGIPYKSVISWGALISGFAQNGFANKTLASLV-EMQNSGFKPDLVSLISSLSACAQVGN 301
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
L +G+ +H K + D G ALIDMYAK G + A FD++ +++I W ++I+
Sbjct: 302 LKVGKSLHGHIVK-RLYLDKVSGTALIDMYAKCGALTFARALFDQIEPRDLILWNAMISS 360
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
Y HG G EA+ L+ KMK + P+ TF SLL ACSH+GL EG F +I+K +I P
Sbjct: 361 YGIHGDGIEALSLFLKMKETNITPDHATFASLLSACSHSGLVEEGQYWFHVLIDKSKIQP 420
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
+H++C+VDL +R GQ+E AY +I M+IKP ++W A+L C + N +GE+ A+ +
Sbjct: 421 SEKHYACMVDLLSRAGQVEEAYQLIESMHIKPGLAIWVALLSGCLNHKNLLIGEMVAKKI 480
Query: 530 FDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+ P+ YV++SN ++ A WD+A RK+M+ +RK PGYS ++
Sbjct: 481 LESNPDDLGIYVLVSNFFSMAKKWDDAAVFRKIMKNTGMRKVPGYSAVE 529
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 195/391 (49%), Gaps = 12/391 (3%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D ST+ L+ C +I + GY ++ + + V+ YAK G + A+ F
Sbjct: 83 DSSTFTVTLKACSSLMDLDMGEIIWNQAVDFGYGFDVFVVSSVLNLYAKSGKMDKAKIVF 142
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D+M +R+VVSWT MI+G+AQ+G +A+ ++ M + + ++AC + +
Sbjct: 143 DKMVKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQKERTEGDGVVMVGLIQACTSLGDSK 202
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G + G + + + ++++L+D+YAK G +E A +FE I K V+SW A+I G A
Sbjct: 203 FGLSVHGHMVRREMNMDNVLQTSLIDMYAKNGKLELASRVFEGIPYKSVISWGALISGFA 262
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIK-LGLES 265
GF + + M G KPD +L S L A VG +++ K +H I+K L L+
Sbjct: 263 QNGFANKTLASLVEMQNSGFKPDLVSLISSLSACAQVGNLKVGK--SLHGHIVKRLYLD- 319
Query: 266 SNKLTGS-LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
K++G+ LID+YAK G++ A L+ + D+I A+IS + + EA LF
Sbjct: 320 --KVSGTALIDMYAKCGALTFARALFDQIEPRDLILWNAMISSYGIHGD-GIEALSLFLK 376
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQ-IHAFAFKYQSSYDAAVGNALIDMYAKSG 383
M + D +L+ C++ + G+ H K + ++D+ +++G
Sbjct: 377 MKETNITPDHATFASLLSACSHSGLVEEGQYWFHVLIDKSKIQPSEKHYACMVDLLSRAG 436
Query: 384 EIADANRAFDEMGDKNVIS-WTSLIAGYAKH 413
++ +A + + M K ++ W +L++G H
Sbjct: 437 QVEEAYQLIESMHIKPGLAIWVALLSGCLNH 467
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 169/452 (37%), Positives = 272/452 (60%), Gaps = 3/452 (0%)
Query: 136 SALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERK 195
S L+ACA + GR + GS K + LLD+YAKCG ++ A ++F+ + +
Sbjct: 3 SILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVR 62
Query: 196 DVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIH 255
VV+W ++I A +G +D++ LF M R+G+ PD FT+ ++L A L +H
Sbjct: 63 TVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVH 122
Query: 256 DLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHS 315
+ I + ++S+ + +L+D+YAK GS+ A ++ M DIIS +I G++++ +
Sbjct: 123 NYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKN-SLP 181
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNAL 375
EA LF DM+L+ M D L +L CA++ASL+ G+++H + D V NAL
Sbjct: 182 NEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANAL 240
Query: 376 IDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND 435
+DMY K G A FD + K++I+WT +IAGY HG+G+ AI + +M+ G+ P++
Sbjct: 241 VDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDE 300
Query: 436 VTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIR 495
V+F+S+L+ACSH+GL EGW F M ++ + P+ EH++C+VDL AR G+L AY I+
Sbjct: 301 VSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIK 360
Query: 496 QMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDN 555
M I+P A++W A+L C I+ + L E A ++F++EPE + YV+L+N Y A W+
Sbjct: 361 SMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEE 420
Query: 556 ARKTRKLMEERSLRKNPGYSFLQ-SSKKNILL 586
+K R+ + R L+KNPG S+++ SK +I L
Sbjct: 421 VKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFL 452
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 214/431 (49%), Gaps = 21/431 (4%)
Query: 34 MSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTK----VIIFYAKVGDVLSARKAFD 89
+S+LQ C + +H +G ++ +H T ++ YAK G + A FD
Sbjct: 2 VSILQACANCGDVSLGRAVHG----SGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFD 57
Query: 90 RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG 149
M R VV+WT++I+ YA+ G + A+ +F M R GV + FT ++ L ACA L+
Sbjct: 58 LMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLEN 117
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
G+ + I++ N+FV +AL+D+YAKCG +EDA +F + KD++SWN MIGG +
Sbjct: 118 GKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSK 177
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
+++ LF M+ + MKPD TL IL A L + ++H I++ G S ++
Sbjct: 178 NSLPNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQV 236
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+L+D+Y K G A L+ + D+I+ T +I+G+ A F +M
Sbjct: 237 ANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGM-HGFGNNAITTFNEMRQAG 295
Query: 330 MGIDDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ D+V +L C++ L+ G R + + ++D+ A+SG++A A
Sbjct: 296 IEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMA 355
Query: 389 NRAFDEMG-DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE--GMVPNDVTFLSLLFAC 445
+ M + + W +L++G H H+ ++L +K+ + P + + LL
Sbjct: 356 YKFIKSMPIEPDATIWGALLSGCRIH---HD-VKLAEKVAEHVFELEPENTGYYVLL--- 408
Query: 446 SHTGLTCEGWE 456
++T E WE
Sbjct: 409 ANTYAEAEKWE 419
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 141/286 (49%), Gaps = 13/286 (4%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T ++L C + +H +I N +SN+ + ++ YAK G + A F
Sbjct: 98 DIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVF 157
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
MP ++++SW MI GY++N AL +F M+ ++ + T + L ACA + L
Sbjct: 158 LEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLE-MKPDGTTLACILPACASLASLD 216
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ + G I + F + V +AL+D+Y KCG A +LF+ I KD+++W MI G
Sbjct: 217 RGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYG 276
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG------GIELMKISQIHDLIIKLG 262
M GF +++ F M + G++PD + SIL A G + Q + +K
Sbjct: 277 MHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQ-DECNVKPK 335
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALISG 307
LE ++D+ A+ G + AY+ +SM ++ D AL+SG
Sbjct: 336 LEH----YACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSG 377
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 195/584 (33%), Positives = 317/584 (54%), Gaps = 16/584 (2%)
Query: 4 VRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYES 63
+ AN ++G L AL+ + P+ ++ + K RQA IH+ + +G E
Sbjct: 200 IAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAKI-RQARAIHSIVRESGLEQ 258
Query: 64 NLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML 123
L +ST + YA++G + A++ FDR ER+VVSW AM+ YAQ+G+ A L+F+ ML
Sbjct: 259 TLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARML 318
Query: 124 RSGVRANQFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWI 182
G+ ++ T +A C+ +R+ GRMI +++KG ++ + +ALLD+Y +CG
Sbjct: 319 HEGIPPSKVTLVNASTGCSSLRF---GRMIHACALEKG-LDRDIVLGNALLDMYTRCGSP 374
Query: 183 EDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS 242
E+A LFE I + VSWN MI G + +G + LF+ M +GM P T ++L A
Sbjct: 375 EEARHLFEGIP-GNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAV 433
Query: 243 VGGIE----LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI-RSAYQLYRSML--K 295
E + + ++H I+ G S + +++ +YA G+I +A R + +
Sbjct: 434 ASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDR 493
Query: 296 TDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQ 355
D++S A+IS ++ H K A F+ M L + + + +L+ CA A+L G
Sbjct: 494 HDVVSWNAIISSLSQH-GHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVI 552
Query: 356 IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHG 414
+H + V AL MY + G + A F+++ +++V+ + ++IA Y+++G
Sbjct: 553 VHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNG 612
Query: 415 YGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF 474
EA++L+ +M+ EG P++ +F+S+L ACSH GL EGWE+F M Y I P +H+
Sbjct: 613 LAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHY 672
Query: 475 SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEP 534
+C VD+ R G L A +IR M++KPT +W +LGAC Y + G LA + +++P
Sbjct: 673 ACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDP 732
Query: 535 EKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
YVVLSNI AG WD A + R ME R LRK G S+++
Sbjct: 733 GDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWIE 776
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 157/530 (29%), Positives = 266/530 (50%), Gaps = 22/530 (4%)
Query: 30 PSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFD 89
P+ + LL+ D + Q IHA I++ G E L ++ Y K + + F
Sbjct: 29 PAHLVRLLRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFS 86
Query: 90 RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG 149
R+ R+ SWT +I+ Y ++G + A+ +F M + GVR + T+ + L+ACAR+ L
Sbjct: 87 RLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQ 146
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
GR I I + + + LL +Y CG + A +LFER+ER D+VSWNA I A
Sbjct: 147 GRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERMER-DLVSWNAAIAANAQ 205
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
G D + LF+ M +G++P TL ++ SV ++ + IH ++ + GLE + +
Sbjct: 206 SGDLDMALELFQRMQLEGVRPARITL--VITLSVCA-KIRQARAIHSIVRESGLEQTLVV 262
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+ +L YA+ G + A +++ + D++S A++ +A+ H EA LF M+ +
Sbjct: 263 STALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQ-HGHMSEAALLFARMLHEG 321
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ V L +N +SL GR IHA A + D +GNAL+DMY + G +A
Sbjct: 322 IPPSKVTL---VNASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEAR 378
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS--- 446
F+ + N +SW ++IAG ++ G A+EL+++M+ EGM P T+L+LL A +
Sbjct: 379 HLFEGI-PGNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNP 437
Query: 447 -HTGLTCEGWELFTDMIN-KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQ--MNIKPT 502
EG +L + +++ Y P + VV ++A G ++ A ++ M +
Sbjct: 438 EEARAMAEGRKLHSRIVSCGYASEPAI--GTAVVKMYASCGAIDEAAASFQRGAMEDRHD 495
Query: 503 ASLWSAILGACSIYGN--TSLGELAARNLFDMEPEKSVNYVVLSNIYTAA 550
W+AI+ + S +G+ +LG +L + P + VL AA
Sbjct: 496 VVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAA 545
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 157/548 (28%), Positives = 270/548 (49%), Gaps = 28/548 (5%)
Query: 2 NIVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
I+ A + GQ K+A+ + D T++++L+ C Q IHA I+ +
Sbjct: 98 TIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVES 157
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G E L+ ++ Y G V SA F+RM ER++VSW A I+ AQ+G + AL +F
Sbjct: 158 GLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGDLDMALELF 216
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
M GVR + T L CA++R R I +++ + L V +AL YA+
Sbjct: 217 QRMQLEGVRPARITLVITLSVCAKIRQ---ARAIHSIVRESGLEQTLVVSTALASAYARL 273
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G ++ A +F+R +DVVSWNAM+G A G ++ LF M+ +G+ P TL +
Sbjct: 274 GHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTL---V 330
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
AS G L IH ++ GL+ L +L+D+Y + GS A L+ + + +
Sbjct: 331 NASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEG-IPGNAV 389
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS-------LNL 352
S +I+G ++ K A +LF+ M L+ M + LN+ VAS +
Sbjct: 390 SWNTMIAGSSQ-KGQMKRALELFQRMQLEGMA---PVRATYLNLLEAVASNPEEARAMAE 445
Query: 353 GRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE--MGDK-NVISWTSLIAG 409
GR++H+ + + A+G A++ MYA G I +A +F M D+ +V+SW ++I+
Sbjct: 446 GRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISS 505
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
++HG+G A+ +++M G+ PN +T +++L AC+ EG + D + +
Sbjct: 506 LSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGV-IVHDHLRHSGMES 564
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
+ + ++ R G LESA + ++ ++ +++A++ A Y L A +
Sbjct: 565 NVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAA---YSQNGLAGEALKLF 621
Query: 530 FDMEPEKS 537
+ M+ E S
Sbjct: 622 WRMQQEGS 629
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 179/543 (32%), Positives = 306/543 (56%), Gaps = 20/543 (3%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HA+ + G E N + ++ Y K+G + S++ R++V+W ++S QN
Sbjct: 224 VHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQ 282
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFVKS 170
AL M+ GV ++FT SS L AC+ + L+ G+ + +++ G EN FV S
Sbjct: 283 LLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGS 342
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ-GMK 229
AL+D+Y C + +F+ + + + WNAMI G + + ++ LF M G+
Sbjct: 343 ALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLL 402
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
+ T+ ++ A V + IH ++K GL+ + +L+D+Y++ G I A ++
Sbjct: 403 ANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRI 462
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK----------MGIDDVILCL 339
+ M D+++ +I+G+ ++H L K L++ + + + L
Sbjct: 463 FGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMT 522
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN 399
+L CA +++L G++IHA+A K + D AVG+AL+DMYAK G + + + FD++ KN
Sbjct: 523 ILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKN 582
Query: 400 VISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFT 459
VI+W +I Y HG G EAI+L + M +G+ PN+VTF+S+ ACSH+G+ EG +F
Sbjct: 583 VITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFY 642
Query: 460 DMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP----TASLWSAILGACSI 515
M Y + P ++H++CVVDL R G+++ AY + MN+ P A WS++LGA I
Sbjct: 643 VMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQL---MNMMPRDFNKAGAWSSLLGASRI 699
Query: 516 YGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYS 575
+ N +GE+AA+NL +EP + +YV+L+NIY++AG WD A + R+ M+E+ +RK PG S
Sbjct: 700 HNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCS 759
Query: 576 FLQ 578
+++
Sbjct: 760 WIE 762
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 141/540 (26%), Positives = 264/540 (48%), Gaps = 29/540 (5%)
Query: 1 MNIVRANFKTGQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIIT 58
++++R+ ++ L++A+ + + P Y +LL+ D + IHAH+
Sbjct: 66 IDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYK 125
Query: 59 NGYE-SNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALL 117
GY ++ ++ ++ Y K GD + K FDR+ ERN VSW ++IS E AL
Sbjct: 126 FGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALE 185
Query: 118 VFSAMLRSGVRANQFTYSSALRACARMRWLQG---GRMIQG-SIQKGRFVENLFVKSALL 173
F ML V + FT S + AC+ + +G G+ + ++KG N F+ + L+
Sbjct: 186 AFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL--NSFIINTLV 243
Query: 174 DLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCF 233
+Y K G + + +L +D+V+WN ++ L ++ R M+ +G++PD F
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 234 TLGSILRASVGGIELMKIS-QIHDLIIKLGLESSNKLTGS-LIDVYAKYGSIRSAYQLYR 291
T+ S+L A +E+++ ++H +K G N GS L+D+Y + S +++
Sbjct: 304 TISSVLPA-CSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 362
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI--DDVILCLMLNICANVAS 349
M I A+I+G+++++ H KEA LF M + G+ + + ++ C +
Sbjct: 363 GMFDRKIGLWNAMIAGYSQNE-HDKEALLLFIGM-EESAGLLANSTTMAGVVPACVRSGA 420
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
+ IH F K D V N L+DMY++ G+I A R F +M D+++++W ++I G
Sbjct: 421 FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITG 480
Query: 410 YAKHGYGHEAIELYKKMKH-----------EGMVPNDVTFLSLLFACSHTGLTCEGWELF 458
Y + +A+ L KM++ + PN +T +++L +C+ +G E+
Sbjct: 481 YVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIH 540
Query: 459 TDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
I K + S +VD++A+ G L+ + + Q+ K + W+ I+ A ++GN
Sbjct: 541 AYAI-KNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVIT-WNVIIMAYGMHGN 598
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 143/281 (50%), Gaps = 12/281 (4%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L + +T ++ C+ A + IH ++ G + + + ++ Y+++G + A +
Sbjct: 402 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMR 461
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML-----------RSGVRANQFTYS 135
F +M +R++V+W MI+GY + + E+ALL+ M R ++ N T
Sbjct: 462 IFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLM 521
Query: 136 SALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERK 195
+ L +CA + L G+ I K ++ V SAL+D+YAKCG ++ + +F++I +K
Sbjct: 522 TILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK 581
Query: 196 DVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQI 254
+V++WN +I M G ++ L R MM QG+KP+ T S+ A S G+ +
Sbjct: 582 NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF 641
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLK 295
+ + G+E S+ ++D+ + G I+ AYQL M +
Sbjct: 642 YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPR 682
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 92/178 (51%), Gaps = 3/178 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T M++L C A + IHA+ I N +++ + + ++ YAK G + +RK FD++
Sbjct: 519 TLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQI 578
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P++NV++W +I Y +G + A+ + M+ GV+ N+ T+ S AC+ + G
Sbjct: 579 PQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGL 638
Query: 152 MIQGSIQKGRFVENLFVKSA-LLDLYAKCGWIEDAWILFERIER--KDVVSWNAMIGG 206
I ++ VE A ++DL + G I++A+ L + R +W++++G
Sbjct: 639 RIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGA 696
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 179/543 (32%), Positives = 306/543 (56%), Gaps = 20/543 (3%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HA+ + G E N + ++ Y K+G + S++ R++V+W ++S QN
Sbjct: 224 VHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQ 282
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFVKS 170
AL M+ GV ++FT SS L AC+ + L+ G+ + +++ G EN FV S
Sbjct: 283 LLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGS 342
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ-GMK 229
AL+D+Y C + +F+ + + + WNAMI G + + ++ LF M G+
Sbjct: 343 ALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLL 402
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
+ T+ ++ A V + IH ++K GL+ + +L+D+Y++ G I A ++
Sbjct: 403 ANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRI 462
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK----------MGIDDVILCL 339
+ M D+++ +I+G+ ++H L K L++ + + + L
Sbjct: 463 FGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMT 522
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN 399
+L CA +++L G++IHA+A K + D AVG+AL+DMYAK G + + + FD++ KN
Sbjct: 523 ILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKN 582
Query: 400 VISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFT 459
VI+W +I Y HG G EAI+L + M +G+ PN+VTF+S+ ACSH+G+ EG +F
Sbjct: 583 VITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFY 642
Query: 460 DMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP----TASLWSAILGACSI 515
M Y + P ++H++CVVDL R G+++ AY + MN+ P A WS++LGA I
Sbjct: 643 VMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQL---MNMMPRDFNKAGAWSSLLGASRI 699
Query: 516 YGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYS 575
+ N +GE+AA+NL +EP + +YV+L+NIY++AG WD A + R+ M+E+ +RK PG S
Sbjct: 700 HNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCS 759
Query: 576 FLQ 578
+++
Sbjct: 760 WIE 762
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 141/540 (26%), Positives = 264/540 (48%), Gaps = 29/540 (5%)
Query: 1 MNIVRANFKTGQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIIT 58
++++R+ ++ L++A+ + + P Y +LL+ D + IHAH+
Sbjct: 66 IDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYK 125
Query: 59 NGYE-SNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALL 117
GY ++ ++ ++ Y K GD + K FDR+ ERN VSW ++IS E AL
Sbjct: 126 FGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALE 185
Query: 118 VFSAMLRSGVRANQFTYSSALRACARMRWLQG---GRMIQG-SIQKGRFVENLFVKSALL 173
F ML V + FT S + AC+ + +G G+ + ++KG N F+ + L+
Sbjct: 186 AFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL--NSFIINTLV 243
Query: 174 DLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCF 233
+Y K G + + +L +D+V+WN ++ L ++ R M+ +G++PD F
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 234 TLGSILRASVGGIELMKIS-QIHDLIIKLGLESSNKLTGS-LIDVYAKYGSIRSAYQLYR 291
T+ S+L A +E+++ ++H +K G N GS L+D+Y + S +++
Sbjct: 304 TISSVLPA-CSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 362
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI--DDVILCLMLNICANVAS 349
M I A+I+G+++++ H KEA LF M + G+ + + ++ C +
Sbjct: 363 GMFDRKIGLWNAMIAGYSQNE-HDKEALLLFIGM-EESAGLLANSTTMAGVVPACVRSGA 420
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
+ IH F K D V N L+DMY++ G+I A R F +M D+++++W ++I G
Sbjct: 421 FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITG 480
Query: 410 YAKHGYGHEAIELYKKMKH-----------EGMVPNDVTFLSLLFACSHTGLTCEGWELF 458
Y + +A+ L KM++ + PN +T +++L +C+ +G E+
Sbjct: 481 YVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIH 540
Query: 459 TDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
I K + S +VD++A+ G L+ + + Q+ K + W+ I+ A ++GN
Sbjct: 541 AYAI-KNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVIT-WNVIIMAYGMHGN 598
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 143/281 (50%), Gaps = 12/281 (4%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L + +T ++ C+ A + IH ++ G + + + ++ Y+++G + A +
Sbjct: 402 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMR 461
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML-----------RSGVRANQFTYS 135
F +M +R++V+W MI+GY + + E+ALL+ M R ++ N T
Sbjct: 462 IFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLM 521
Query: 136 SALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERK 195
+ L +CA + L G+ I K ++ V SAL+D+YAKCG ++ + +F++I +K
Sbjct: 522 TILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK 581
Query: 196 DVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQI 254
+V++WN +I M G ++ L R MM QG+KP+ T S+ A S G+ +
Sbjct: 582 NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF 641
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLK 295
+ + G+E S+ ++D+ + G I+ AYQL M +
Sbjct: 642 YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPR 682
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 92/178 (51%), Gaps = 3/178 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T M++L C A + IHA+ I N +++ + + ++ YAK G + +RK FD++
Sbjct: 519 TLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQI 578
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P++NV++W +I Y +G + A+ + M+ GV+ N+ T+ S AC+ + G
Sbjct: 579 PQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGL 638
Query: 152 MIQGSIQKGRFVENLFVKSA-LLDLYAKCGWIEDAWILFERIER--KDVVSWNAMIGG 206
I ++ VE A ++DL + G I++A+ L + R +W++++G
Sbjct: 639 RIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGA 696
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 160/459 (34%), Positives = 277/459 (60%), Gaps = 3/459 (0%)
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
M G+ N Y++ L C R R ++ G+ + + K ++ +++++ L+ Y KC
Sbjct: 49 MALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDS 108
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
+ DA +F+ + ++VVSW AMI + +G+ + LF M+R G +P+ FT ++L +
Sbjct: 109 LRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTS 168
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC 301
+G + QIH IIKL E+ + SL+D+YAK G I A +++ + + D++SC
Sbjct: 169 CIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSC 228
Query: 302 TALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF 361
TA+ISG+A+ +EA +LF+ + + M + V +L + +A+L+ G+Q+H
Sbjct: 229 TAIISGYAQ-LGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLL 287
Query: 362 KYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIE 421
+ + + N+LIDMY+K G + A R FD + ++ VISW +++ GY+KHG G E +E
Sbjct: 288 RSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLE 347
Query: 422 LYKKMKHEGMV-PNDVTFLSLLFACSHTGLTCEGWELFTDMIN-KYRILPRAEHFSCVVD 479
L+ M E V P+ VT L++L CSH GL +G ++F DM + K + P ++H+ CVVD
Sbjct: 348 LFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVD 407
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVN 539
+ R G++E+A+ +++M +P+A++W +LGACS++ N +GE L +EPE + N
Sbjct: 408 MLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIEPENAGN 467
Query: 540 YVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
YV+LSN+Y +AG W++ R R LM ++++ K PG S+++
Sbjct: 468 YVILSNLYASAGRWEDVRSLRNLMLKKAVTKEPGRSWIE 506
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 128/385 (33%), Positives = 213/385 (55%), Gaps = 5/385 (1%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y ++L C+ K+A R+ +HAH+I Y ++L T++I+FY K + AR FD MP
Sbjct: 61 YNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMP 120
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
ERNVVSWTAMIS Y+Q GY AL +F MLRSG N+FT+++ L +C GR
Sbjct: 121 ERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQ 180
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF 212
I I K + +++V S+LLD+YAK G I +A +F+ + +DVVS A+I G A G
Sbjct: 181 IHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGL 240
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS 272
++++ LFR + R+GM+ + T S+L A G L Q+H+ +++ + S L S
Sbjct: 241 DEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNS 300
Query: 273 LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK-KMG 331
LID+Y+K G++ A +++ ++ + +IS A++ G+++ +E +LF MI + K+
Sbjct: 301 LIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSK-HGEGREVLELFNLMIDENKVK 359
Query: 332 IDDVILCLMLNICANVASLNLGRQI--HAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
D V + +L+ C++ + G I + K D+ ++DM ++G + A
Sbjct: 360 PDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAF 419
Query: 390 RAFDEMG-DKNVISWTSLIAGYAKH 413
+M + + W L+ + H
Sbjct: 420 EFVKKMPFEPSAAIWGCLLGACSVH 444
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 165/296 (55%), Gaps = 5/296 (1%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNG 60
++ A + G QAL + + +P+ T+ ++L CI IH+HII
Sbjct: 130 MISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLN 189
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
YE+++++ + ++ YAK G + AR F +PER+VVS TA+ISGYAQ G DE AL +F
Sbjct: 190 YEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFR 249
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
+ R G+++N TY+S L A + + L G+ + + + + ++++L+D+Y+KCG
Sbjct: 250 RLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCG 309
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG-MKPDCFTLGSIL 239
+ A +F+ + + V+SWNAM+ G + G + LF M+ + +KPD T+ ++L
Sbjct: 310 NLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVL 369
Query: 240 RA-SVGGIELMKISQIHDLII-KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
S GG+E + +D+ K+ ++ +K G ++D+ + G + +A++ + M
Sbjct: 370 SGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKM 425
>gi|2828294|emb|CAA16708.1| putatative protein [Arabidopsis thaliana]
gi|7268714|emb|CAB78921.1| putatative protein [Arabidopsis thaliana]
Length = 1260
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 192/537 (35%), Positives = 302/537 (56%), Gaps = 6/537 (1%)
Query: 51 LIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
++HAH+I + + S++ + T + + K V A K F+RMPER+ +W AM+SG+ Q+G
Sbjct: 679 MVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSG 738
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFVK 169
+ + A +F M + + + T + +++ + + L+ + I+ G V+ + V
Sbjct: 739 HTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQ-VTVA 797
Query: 170 SALLDLYAKCGWIEDAWILFERIERKD--VVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
+ + Y KCG ++ A ++FE I+R D VVSWN+M ++ G D+F L+ M+R+
Sbjct: 798 NTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREE 857
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
KPD T ++ + L + IH I LG + + + I +Y+K SA
Sbjct: 858 FKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSAR 917
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
L+ M +S T +ISG+A + EA LF MI D V L +++ C
Sbjct: 918 LLFDIMTSRTCVSWTVMISGYAEKGDMD-EALALFHAMIKSGEKPDLVTLLSLISGCGKF 976
Query: 348 ASLNLGRQIHAFAFKYQSSYDAA-VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
SL G+ I A A Y D + NALIDMY+K G I +A FD +K V++WT++
Sbjct: 977 GSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTM 1036
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYR 466
IAGYA +G EA++L+ KM PN +TFL++L AC+H+G +GWE F M Y
Sbjct: 1037 IAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYN 1096
Query: 467 ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAA 526
I P +H+SC+VDL R+G+LE A +IR M+ KP A +W A+L AC I+ N + E AA
Sbjct: 1097 ISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAA 1156
Query: 527 RNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKN 583
+LF++EP+ + YV ++NIY AAG WD + R +M++R+++K PG S +Q + KN
Sbjct: 1157 ESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKN 1213
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 205/436 (47%), Gaps = 26/436 (5%)
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
+V +W I +LL+F M R G N FT+ +ACAR+ + M+
Sbjct: 622 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 681
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND 214
+ K F ++FV +A +D++ KC ++ A +FER+ +D +WNAM+ G G D
Sbjct: 682 AHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTD 741
Query: 215 DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLI 274
+F LFR M + PD T+ ++++++ L + +H + I+LG++ + + I
Sbjct: 742 KAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWI 801
Query: 275 DVYAKYGSIRSAYQLYRSMLKTD--IISCTALISGFARDDNHSKEAFDLFKDMILKKMGI 332
Y K G + SA ++ ++ + D ++S ++ ++ + +AF L+ M+ ++
Sbjct: 802 STYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSV-FGEAFDAFGLYCLMLREEFKP 860
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAF 392
D + C N +L GR IH+ A + D N I MY+KS + A F
Sbjct: 861 DLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLF 920
Query: 393 DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG-LT 451
D M + +SWT +I+GYA+ G EA+ L+ M G P+ VT LSL+ C G L
Sbjct: 921 DIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLE 980
Query: 452 CEGWELFTDMINKYRILPRAEHFSC----------VVDLFARRGQLESAYNMIRQMNIKP 501
W I RA+ + C ++D++++ G + A ++ K
Sbjct: 981 TGKW-----------IDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEK- 1028
Query: 502 TASLWSAILGACSIYG 517
T W+ ++ ++ G
Sbjct: 1029 TVVTWTTMIAGYALNG 1044
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 141/273 (51%), Gaps = 14/273 (5%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D ST+++L C + + Q LIH+H I G + ++ I Y+K D SAR F
Sbjct: 861 DLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLF 920
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D M R VSWT MISGYA+ G + AL +F AM++SG + + T S + C + L+
Sbjct: 921 DIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLE 980
Query: 149 GGRMIQGSIQ-KGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ I G +N+ + +AL+D+Y+KCG I +A +F+ K VV+W MI G
Sbjct: 981 TGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGY 1040
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMK-------ISQIHDLIIK 260
A+ G ++ LF M+ KP+ T ++L+A L K + Q+++ I
Sbjct: 1041 ALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYN--IS 1098
Query: 261 LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
GL+ + ++D+ + G + A +L R+M
Sbjct: 1099 PGLDHYS----CMVDLLGRKGKLEEALELIRNM 1127
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 177/372 (47%), Gaps = 15/372 (4%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS 83
PD++ T M+L+Q +K+ + +HA I G + + ++ I Y K GD+ S
Sbjct: 757 PDSV----TVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDS 812
Query: 84 ARKAFDRMP--ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC 141
A+ F+ + +R VVSW +M Y+ G +A ++ MLR + + T+ + +C
Sbjct: 813 AKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASC 872
Query: 142 ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN 201
L GR+I +++ + + +Y+K A +LF+ + + VSW
Sbjct: 873 QNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWT 932
Query: 202 AMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMK-ISQIHDLI 258
MI G A +G D++ LF +M++ G KPD TL S++ G +E K I D+
Sbjct: 933 VMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADI- 991
Query: 259 IKLGLESSN-KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKE 317
G + N + +LID+Y+K GSI A ++ + + +++ T +I+G+A + E
Sbjct: 992 --YGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFL-E 1048
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQ-IHAFAFKYQSSYDAAVGNALI 376
A LF MI + + +L CA+ SL G + H Y S + ++
Sbjct: 1049 ALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMV 1108
Query: 377 DMYAKSGEIADA 388
D+ + G++ +A
Sbjct: 1109 DLLGRKGKLEEA 1120
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 179/543 (32%), Positives = 306/543 (56%), Gaps = 20/543 (3%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HA+ + G E N + ++ Y K+G + S++ R++V+W ++S QN
Sbjct: 137 VHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQ 195
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFVKS 170
AL M+ GV ++FT SS L AC+ + L+ G+ + +++ G EN FV S
Sbjct: 196 LLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGS 255
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ-GMK 229
AL+D+Y C + +F+ + + + WNAMI G + + ++ LF M G+
Sbjct: 256 ALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLL 315
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
+ T+ ++ A V + IH ++K GL+ + +L+D+Y++ G I A ++
Sbjct: 316 ANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRI 375
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK----------MGIDDVILCL 339
+ M D+++ +I+G+ ++H L K L++ + + + L
Sbjct: 376 FGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMT 435
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN 399
+L CA +++L G++IHA+A K + D AVG+AL+DMYAK G + + + FD++ KN
Sbjct: 436 ILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKN 495
Query: 400 VISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFT 459
VI+W +I Y HG G EAI+L + M +G+ PN+VTF+S+ ACSH+G+ EG +F
Sbjct: 496 VITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFY 555
Query: 460 DMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP----TASLWSAILGACSI 515
M Y + P ++H++CVVDL R G+++ AY + MN+ P A WS++LGA I
Sbjct: 556 VMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQL---MNMMPRDFNKAGAWSSLLGASRI 612
Query: 516 YGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYS 575
+ N +GE+AA+NL +EP + +YV+L+NIY++AG WD A + R+ M+E+ +RK PG S
Sbjct: 613 HNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCS 672
Query: 576 FLQ 578
+++
Sbjct: 673 WIE 675
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 137/510 (26%), Positives = 249/510 (48%), Gaps = 27/510 (5%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYE-SNLHLSTKVIIFYAKVGDVLSARKA 87
D + +LL+ D + IHAH+ GY ++ ++ ++ Y K GD + K
Sbjct: 9 DNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKV 68
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FDR+ ERN VSW ++IS E AL F ML V + FT S + AC+ +
Sbjct: 69 FDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMP 128
Query: 148 QG---GRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
+G G+ + ++KG N F+ + L+ +Y K G + + +L +D+V+WN +
Sbjct: 129 EGLMMGKQVHAYGLRKGEL--NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTV 186
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLG 262
+ L ++ R M+ +G++PD FT+ S+L A +E+++ ++H +K G
Sbjct: 187 LSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPA-CSHLEMLRTGKELHAYALKNG 245
Query: 263 LESSNKLTGS-LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDL 321
N GS L+D+Y + S +++ M I A+I+G+++++ H KEA L
Sbjct: 246 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNE-HDKEALLL 304
Query: 322 FKDMILKKMGI--DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMY 379
F M + G+ + + ++ C + + IH F K D V N L+DMY
Sbjct: 305 FIGM-EESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMY 363
Query: 380 AKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKH----------- 428
++ G+I A R F +M D+++++W ++I GY + +A+ L KM++
Sbjct: 364 SRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASR 423
Query: 429 EGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLE 488
+ PN +T +++L +C+ +G E+ I K + S +VD++A+ G L+
Sbjct: 424 VSLKPNSITLMTILPSCAALSALAKGKEIHAYAI-KNNLATDVAVGSALVDMYAKCGCLQ 482
Query: 489 SAYNMIRQMNIKPTASLWSAILGACSIYGN 518
+ + Q+ K + W+ I+ A ++GN
Sbjct: 483 MSRKVFDQIPQKNVIT-WNVIIMAYGMHGN 511
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 142/279 (50%), Gaps = 12/279 (4%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L + +T ++ C+ A + IH ++ G + + + ++ Y+++G + A +
Sbjct: 315 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMR 374
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML-----------RSGVRANQFTYS 135
F +M +R++V+W MI+GY + + E+ALL+ M R ++ N T
Sbjct: 375 IFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLM 434
Query: 136 SALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERK 195
+ L +CA + L G+ I K ++ V SAL+D+YAKCG ++ + +F++I +K
Sbjct: 435 TILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK 494
Query: 196 DVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQI 254
+V++WN +I M G ++ L R MM QG+KP+ T S+ A S G+ +
Sbjct: 495 NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF 554
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ + G+E S+ ++D+ + G I+ AYQL M
Sbjct: 555 YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMM 593
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 150/297 (50%), Gaps = 9/297 (3%)
Query: 223 MMRQGMKPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLGLE-SSNKLTGSLIDVYAKY 280
M+ G+KPD + ++L+A V ++ M++ QIH + K G S + +L+++Y K
Sbjct: 1 MIVLGIKPDNYAFPALLKA-VADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKC 59
Query: 281 GSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLM 340
G + Y+++ + + + +S +LIS + + A + F+ M+ + + L +
Sbjct: 60 GDFGAVYKVFDRISERNQVSWNSLISSLCSFEKW-EMALEAFRCMLDENVEPSSFTLVSV 118
Query: 341 LNICANVA---SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD 397
+ C+N+ L +G+Q+HA+ + + ++ + N L+ MY K G++A + G
Sbjct: 119 VTACSNLPMPEGLMMGKQVHAYGLR-KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGG 177
Query: 398 KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWEL 457
+++++W ++++ ++ EA+E ++M EG+ P++ T S+L ACSH + G EL
Sbjct: 178 RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 237
Query: 458 FTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACS 514
+ + + S +VD++ Q+ S + M LW+A++ S
Sbjct: 238 HAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM-FDRKIGLWNAMIAGYS 293
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 101/195 (51%), Gaps = 8/195 (4%)
Query: 14 KQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVII 73
K A + SL P+++ T M++L C A + IHA+ I N +++ + + ++
Sbjct: 419 KGASRVSLK-PNSI----TLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVD 473
Query: 74 FYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFT 133
YAK G + +RK FD++P++NV++W +I Y +G + A+ + M+ GV+ N+ T
Sbjct: 474 MYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVT 533
Query: 134 YSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA-LLDLYAKCGWIEDAWILFERI 192
+ S AC+ + G I ++ VE A ++DL + G I++A+ L +
Sbjct: 534 FISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMM 593
Query: 193 ER--KDVVSWNAMIG 205
R +W++++G
Sbjct: 594 PRDFNKAGAWSSLLG 608
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 198/586 (33%), Positives = 318/586 (54%), Gaps = 20/586 (3%)
Query: 4 VRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGY 61
+ AN ++G L AL+ + P+ T + L C RQA IH + +G
Sbjct: 200 IAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCATI---RQAQAIHFIVRESGL 256
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSA 121
E L +ST + YA++G + A++ FDR ER+VVSW AM+ YAQ+G+ A L+F+
Sbjct: 257 EQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFAR 316
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKCG 180
ML G+ ++ T +A C+ +R+ GRMI G +++KG ++ + +ALLD+Y +CG
Sbjct: 317 MLHEGISPSKVTLVNASTGCSSLRF---GRMIHGCALEKG-LDRDIVLGNALLDMYTRCG 372
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
E+A LF+RI + VSWN MI G + +G + LF+ M +GM P T ++L
Sbjct: 373 SPEEARHLFKRIP-CNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLE 431
Query: 241 ASVGGIE----LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI-RSAYQLYRSML- 294
A E + + ++H I+ G S + +++ +YA G+I +A R +
Sbjct: 432 AVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAME 491
Query: 295 -KTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG 353
+ D++S A+IS ++ H K A F+ M L + + + +L+ CA A+L G
Sbjct: 492 DRHDVVSWNAIISSLSQH-GHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEG 550
Query: 354 RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAK 412
+H + V AL MY + G + A F+++ +++V+ + ++IA Y++
Sbjct: 551 EIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQ 610
Query: 413 HGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAE 472
+G EA++L+ +M+ EG P++ +F+S+L ACSH GL EGWE+F M Y I P +
Sbjct: 611 NGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSED 670
Query: 473 HFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDM 532
H++C VD+ R G L A +IR M++KPT +W +LGAC Y + G LA + ++
Sbjct: 671 HYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVREL 730
Query: 533 EPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+P YVVLSNI AG WD A + R ME R LRK G S+++
Sbjct: 731 DPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWIE 776
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 153/530 (28%), Positives = 259/530 (48%), Gaps = 22/530 (4%)
Query: 30 PSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFD 89
P+ + LL+ D + Q IHA I++ G E L ++ Y K + + F
Sbjct: 29 PAHLVRLLRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFS 86
Query: 90 RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG 149
R+ R+ SWT +I+ Y ++G + A+ +F M + GVR + T+ + L+ACAR+ L
Sbjct: 87 RLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQ 146
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
GR I I + + + LL +Y CG + A +LFE++ER D+VSWNA I A
Sbjct: 147 GRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKMER-DLVSWNAAIAANAQ 205
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
G + LF+ M +G++P TL L + + IH ++ + GLE + +
Sbjct: 206 SGDLGIALELFQRMQLEGVRPARITLVIALTVCA---TIRQAQAIHFIVRESGLEQTLVV 262
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+ +L YA+ G + A +++ + D++S A++ +A+ H EA LF M+ +
Sbjct: 263 STALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQ-HGHMSEAALLFARMLHEG 321
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ V L +N +SL GR IH A + D +GNAL+DMY + G +A
Sbjct: 322 ISPSKVTL---VNASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEAR 378
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS--- 446
F + N +SW ++IAG ++ G A+EL+++M+ EGM P T+L+LL A +
Sbjct: 379 HLFKRI-PCNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNP 437
Query: 447 -HTGLTCEGWELFTDMIN-KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQ--MNIKPT 502
EG +L + +++ Y P + VV ++A G ++ A ++ M +
Sbjct: 438 EEARAMAEGRKLHSRIVSCGYASEPAI--GTAVVKMYASCGAIDEAAASFQRGAMEDRHD 495
Query: 503 ASLWSAILGACSIYGN--TSLGELAARNLFDMEPEKSVNYVVLSNIYTAA 550
W+AI+ + S +G+ +LG +L + P + VL AA
Sbjct: 496 VVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAA 545
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 185/569 (32%), Positives = 318/569 (55%), Gaps = 7/569 (1%)
Query: 16 ALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFY 75
AL F + +P T+ S+L + A +HA + G S + + +I Y
Sbjct: 187 ALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMY 246
Query: 76 AKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYS 135
+K G V A+ F +M R++VSW +++G N + AL +F S + +Q TYS
Sbjct: 247 SKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYS 306
Query: 136 SALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE-R 194
+ ++ CA ++ L R + + K F + V +A++D Y+KCG ++DA+ +F +
Sbjct: 307 TVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGS 366
Query: 195 KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQI 254
++VVSW AMIGG + LF M +KP+ FT ++L AS+ + + QI
Sbjct: 367 QNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIP----ILLPQI 422
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH 314
H IIK + + + +L+ Y+K G+ A +++ + D+++ +A++S +++ +
Sbjct: 423 HAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGD- 481
Query: 315 SKEAFDLFKDMILKKMGIDDVILCLMLNICAN-VASLNLGRQIHAFAFKYQSSYDAAVGN 373
A ++F M ++ M ++ + ++ CA+ A ++ GRQ HA + KY+ VG+
Sbjct: 482 CDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGS 541
Query: 374 ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP 433
AL+ MYA+ G I A F+ D++++SW S+I+GYA+HGY EA++ +++M+ G+
Sbjct: 542 ALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEM 601
Query: 434 NDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNM 493
+ TFL+++ C+H GL EG + F M+ + I P EH+SC+VDL++R G+L+ N+
Sbjct: 602 DGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNL 661
Query: 494 IRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAW 553
I M A +W +LGAC ++ N LG+LAA+ L +EP+ S YV+LSNIY AAG W
Sbjct: 662 IEGMPFPAGAMVWRTLLGACRVHKNVELGKLAAQKLLLLEPDDSATYVLLSNIYAAAGRW 721
Query: 554 DNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+ RKLM+ + ++K G S++Q K
Sbjct: 722 KERDEVRKLMDSKKVKKEAGCSWIQIKNK 750
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/468 (26%), Positives = 234/468 (50%), Gaps = 8/468 (1%)
Query: 52 IHAHIITNGYE-SNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
+H + G++ + + + T ++ Y K G V R F+ MP+RNVV+WT++++GY Q
Sbjct: 121 LHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGR 180
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
+ + +F M GV N FT++S L A A + GR + K +FV +
Sbjct: 181 ACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCN 240
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
+L+++Y+KCG +E+A +F ++E +D+VSWN ++ GL + ++ LF K
Sbjct: 241 SLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKL 300
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
T ++++ +L Q+H ++K G S + +++D Y+K G + A+ ++
Sbjct: 301 SQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIF 360
Query: 291 RSMLKT-DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
M + +++S TA+I G ++ + A LF M + ++ +L +
Sbjct: 361 LLMPGSQNVVSWTAMIGGCIQNADIPLAAA-LFSRMREDNVKPNEFTYSTVLTASIPI-- 417
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
L QIHA K + +VG AL+ Y+K G +A F + K+V++W+++++
Sbjct: 418 --LLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSC 475
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
Y++ G A ++ KM +GM PN+ T S + AC+ + F + KYR
Sbjct: 476 YSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQD 535
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
S +V ++AR+G ++SA + + + S W++++ + +G
Sbjct: 536 AICVGSALVTMYARKGSIDSARIVFERQTDRDLVS-WNSMISGYAQHG 582
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 215/660 (32%), Positives = 335/660 (50%), Gaps = 101/660 (15%)
Query: 22 SCPDTLLDPS-TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGD 80
S L PS Y S LQ + K IHA II G + L ++ FYAK G
Sbjct: 4 SSSQILTSPSDPYTSFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGF 63
Query: 81 VLSARKAFDRMPERNV-------------------------------VSWTAMISGYAQN 109
+ A + FD MP ++V VSWTAMI GY Q
Sbjct: 64 IYDAHRVFDEMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQM 123
Query: 110 GYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK 169
G ENA+ +F M+ V QFT ++ L +CA + L GR + + K + V
Sbjct: 124 GQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVA 183
Query: 170 SALLDLYAKCG-------------------W------------IEDAWILFERIERKDVV 198
++LL++YAK G W ++ A + FE++ +DVV
Sbjct: 184 NSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVV 243
Query: 199 SWNAMIGGLAMQGFNDDSFWLFRSM-MRQGMKPDCFTLGSILRASVGGIELMKIS-QIHD 256
SWNAMI G GF+ ++ +F M M KPD FTL S L A +E +K+ QIH
Sbjct: 244 SWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSA-CANLENLKLGKQIHA 302
Query: 257 LIIKL--------------------GLESSNKLT-------------GSLIDVYAKYGSI 283
II+ G+E + K+ +L+D Y K G I
Sbjct: 303 HIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDI 362
Query: 284 RSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNI 343
A +++ S+ D+++ TA+I G+ ++ +++A +LF+ MI + ++ L ML++
Sbjct: 363 NPARRIFDSLRVRDVVAWTAMIVGYVQN-GFNQDAMELFRSMIKEGPKPNNYTLATMLSV 421
Query: 344 CANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVIS 402
+++ASL+ GRQIHA A + ++ +V NALI MYAKSG I DA F+ + ++ I+
Sbjct: 422 SSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTIT 481
Query: 403 WTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI 462
WTS+I A+HG G EA+ L+++M G+ P+ +T++ +L AC+H GL +G + M
Sbjct: 482 WTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQ 541
Query: 463 NKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLG 522
N ++I+P H++C++DLF R G L+ A+ I M I+P W ++L +C ++ N L
Sbjct: 542 NAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELA 601
Query: 523 ELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
E+AA L +EPE S Y L+N+Y+A G W+NA RK M+++ ++K+ G+S++Q K
Sbjct: 602 EVAAERLLLIEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNK 661
>gi|224126745|ref|XP_002319916.1| predicted protein [Populus trichocarpa]
gi|222858292|gb|EEE95839.1| predicted protein [Populus trichocarpa]
Length = 606
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 181/575 (31%), Positives = 316/575 (54%), Gaps = 9/575 (1%)
Query: 9 KTGQLKQALKFSLSCPDTLLD--PSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K+G L +A+ S T L P Y SLLQ C + H+H I +G +++
Sbjct: 37 KSGSLFEAIHVLNSIDWTRLSNKPFFYASLLQTCTKAVSFTHGIQFHSHAIKSGLDTDRF 96
Query: 67 LSTKVIIFYAKVG-DVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
+ ++ Y K+G ++ AR+ FD + ++++SWT+MI+GY + + +L +F ML
Sbjct: 97 VGNSLLALYFKLGPNLFEARRVFDGLFYKDLISWTSMITGYVKVEKPKKSLELFLEMLGL 156
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
G+ N FT S+ ++AC+ + L+ G+ G + F N + +AL+D+Y + ++DA
Sbjct: 157 GIEPNGFTLSAVIKACSGLGDLRLGKCFHGVVMVRGFDLNDVISTALIDMYGRNSAVDDA 216
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ-GMKPDCFTLGSILRASVG 244
++F + + D + W ++I D + F SM R+ G+ PD FT G++L A
Sbjct: 217 ILVFVELPQPDAICWTSIISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTACGN 276
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
L + ++H +I GL + + SL+D+Y K + + ++ M +++S TAL
Sbjct: 277 LGRLKQGKEVHAKVITSGLSGNVFVESSLVDMYGKCRLVNQSQCVFDRMSVKNLVSWTAL 336
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
+ G+ ++ + F+ + + +D +L CA +A++ G+++H K
Sbjct: 337 LGGYCQNGD-----FESVIRIFREGKKVDTYSFGTVLRACAGLAAVRQGKEVHCQYVKRC 391
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
D +AL+D+YAK G I A R F M +N+I+W S+I G+A++G G E +L+
Sbjct: 392 CWRDVVTESALVDLYAKCGCIDFAYRIFVRMSVRNLITWNSMIYGFAQNGRGGEVFQLFD 451
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
+M EG+ P+ ++F+ +LFACSH GL +G + F M Y I P EH++C++DL R
Sbjct: 452 EMIEEGIRPDYISFVGVLFACSHAGLVDQGKKYFAAMTEVYEIKPGIEHYNCMIDLLGRA 511
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLS 544
G LE A N+I N + SLW+ +LGAC+ +++ E A+ +++P+ ++YV L+
Sbjct: 512 GLLEEAENLIENANCRDEPSLWTVLLGACAASPHSATAERIAKKAVELKPDHHLSYVYLA 571
Query: 545 NIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQS 579
N+Y A G WD+A K R LM +R + K PG S++++
Sbjct: 572 NVYRAVGRWDDAVKIRNLMTKRGVGKMPGTSWIET 606
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 125/472 (26%), Positives = 230/472 (48%), Gaps = 28/472 (5%)
Query: 106 YAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVEN 165
Y ++G A+ V +++ + + F Y+S L+ C + G K +
Sbjct: 35 YCKSGSLFEAIHVLNSIDWTRLSNKPFFYASLLQTCTKAVSFTHGIQFHSHAIKSGLDTD 94
Query: 166 LFVKSALLDLYAKCGW-IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMM 224
FV ++LL LY K G + +A +F+ + KD++SW +MI G S LF M+
Sbjct: 95 RFVGNSLLALYFKLGPNLFEARRVFDGLFYKDLISWTSMITGYVKVEKPKKSLELFLEML 154
Query: 225 RQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIR 284
G++P+ FTL ++++A G +L H +++ G + ++ ++ +LID+Y + ++
Sbjct: 155 GLGIEPNGFTLSAVIKACSGLGDLRLGKCFHGVVMVRGFDLNDVISTALIDMYGRNSAVD 214
Query: 285 SAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK-MGIDDVILCLMLNI 343
A ++ + + D I T++IS F R+D + K A F M K + D +L
Sbjct: 215 DAILVFVELPQPDAICWTSIISAFTRNDVYDK-ALGFFYSMCRKHGLSPDGFTFGTVLTA 273
Query: 344 CANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISW 403
C N+ L G+++HA S + V ++L+DMY K + + FD M KN++SW
Sbjct: 274 CGNLGRLKQGKEVHAKVITSGLSGNVFVESSLVDMYGKCRLVNQSQCVFDRMSVKNLVSW 333
Query: 404 TSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMIN 463
T+L+ GY ++G I +++ EG + +F ++L AC+ +G E+ +
Sbjct: 334 TALLGGYCQNGDFESVIRIFR----EGKKVDTYSFGTVLRACAGLAAVRQGKEVHCQYVK 389
Query: 464 K--YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG---N 518
+ +R + S +VDL+A+ G ++ AY + +M+++ + W+++ IYG N
Sbjct: 390 RCCWRDVVTE---SALVDLYAKCGCIDFAYRIFVRMSVRNLIT-WNSM-----IYGFAQN 440
Query: 519 TSLGELAARNLFDMEPEKSV--NYVVLSNIYTA---AGAWDNARKTRKLMEE 565
GE+ LFD E+ + +Y+ + A AG D +K M E
Sbjct: 441 GRGGEVF--QLFDEMIEEGIRPDYISFVGVLFACSHAGLVDQGKKYFAAMTE 490
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 184/567 (32%), Positives = 305/567 (53%), Gaps = 13/567 (2%)
Query: 21 LSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGD 80
LS L + + ++ LQ C D + + +H+ +IT G+ + T +I Y+K G
Sbjct: 2 LSAIQMLNNVTKCVAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQ 61
Query: 81 VLSARKAF-DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALR 139
+ A F D ERNV ++ A+ISG+ NG + M GV +++T+ +R
Sbjct: 62 MGEAILVFYDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVR 121
Query: 140 ACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS 199
C + + + I G + K ++FV SAL++ Y K G +EDA +F + +DVV
Sbjct: 122 TCCEVMEV---KKIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVL 178
Query: 200 WNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLII 259
WNAMI G A G D++ +FR M +G+ P FT+ IL +L +H +++
Sbjct: 179 WNAMINGYAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVM 238
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
K+G +S ++ +LID+Y K I A ++ + + DI S ++IS + +H
Sbjct: 239 KMGYDSGVSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDG-TL 297
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA--------V 371
LF M+ + D V + +L C+++A+L GR+IH + D V
Sbjct: 298 RLFDKMLGSGILPDLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLV 357
Query: 372 GNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGM 431
NA++DMYAK G + +A + FD M K+V SW +I GY HGY EA+ ++ +M
Sbjct: 358 SNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEF 417
Query: 432 VPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAY 491
PN+VT + +L AC+H G G M + + ++P EH++CV+D+ R G LE AY
Sbjct: 418 KPNEVTLVGVLSACNHAGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAY 477
Query: 492 NMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAG 551
++++M I+ +W A+LGAC ++GN L E+AAR + +EPE +YV++SN+Y G
Sbjct: 478 EIVQKMPIQANPVVWRALLGACRLHGNAELAEIAARQVLQLEPEHCGSYVLMSNVYGVIG 537
Query: 552 AWDNARKTRKLMEERSLRKNPGYSFLQ 578
++ + RK M+E++++K PG S+++
Sbjct: 538 RYEEVLEVRKTMKEQNVKKTPGCSWIE 564
>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
Length = 770
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 175/547 (31%), Positives = 300/547 (54%), Gaps = 11/547 (2%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y+ LL C++ + A +H H++ G +++ ++T ++ Y + G AR FD+MP
Sbjct: 81 YVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMP 140
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
E+NVV+WTA+I+GY N AL VF ML +G + +T + L AC+ G
Sbjct: 141 EKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQ 200
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM-QG 211
+ G K R + + ++L +YAK G +E A F + K+V++W MI A +
Sbjct: 201 VHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDEN 260
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
+ + LF M+ G+ P+ FTL S++ ++L Q+ K+G +++ +
Sbjct: 261 YTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKN 320
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFA------RDDNHSK----EAFDL 321
S + +Y + G A + + M II+ A+ISG+A +DD H++ +A +
Sbjct: 321 STMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKV 380
Query: 322 FKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
F+++ M D +L++C+++ +L G QIHA K D V +AL++MY K
Sbjct: 381 FRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNK 440
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
G I DA +AF EM + +++WTS+I+GY++HG EAI+L++ M+ G+ PN++TF+ +
Sbjct: 441 CGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCV 500
Query: 442 LFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
L ACS+ GL + F M +Y+I P +H+ C+VD+F R G+L+ A+ IR+ +P
Sbjct: 501 LSACSYAGLAEKAEHYFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEP 560
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRK 561
++WS+++ C +GN L AA L ++ P+ YV+L N+Y + W + + RK
Sbjct: 561 NEAIWSSLVAGCRSHGNMELAFYAADRLIELRPKGIETYVLLLNMYISNERWHDVARVRK 620
Query: 562 LMEERSL 568
LM++ L
Sbjct: 621 LMKQEGL 627
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 133/458 (29%), Positives = 225/458 (49%), Gaps = 25/458 (5%)
Query: 83 SARKAFDRMPERNVVS------WTAMISGYAQNGYDENALL------VFSAMLRSGVRAN 130
+A A R P + VS W AQNG A L AMLR G
Sbjct: 18 AAGGADSRRPPPSSVSAADKNNWNGRSIQAAQNGSTMEAPLRPLDVGEAMAMLREGKTVQ 77
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE 190
Y L C L G R + G + K ++FV ++L++ Y +CG +DA LF+
Sbjct: 78 SAMYVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFD 137
Query: 191 RIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMK 250
++ K+VV+W A+I G + ++ +F M+ G P +TLG++L A
Sbjct: 138 QMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADL 197
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR 310
SQ+H IK S + SL +YAK GS+ SA + +R + ++I+ T +IS A
Sbjct: 198 GSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAE 257
Query: 311 DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA 370
D+N+++ LF DM++ + ++ L ++++C LNLG+Q+ AF FK +
Sbjct: 258 DENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIP 317
Query: 371 VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAK-----------HGYGHEA 419
V N+ + +Y + GE +A R F+EM D ++I+W ++I+GYA+ G +A
Sbjct: 318 VKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQA 377
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD 479
+++++ +K M P+ TF S+L CS +G ++ I K L S +V+
Sbjct: 378 LKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTI-KTGFLSDVVVNSALVN 436
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
++ + G +E A +M+I+ T W++++ S +G
Sbjct: 437 MYNKCGCIEDATKAFVEMSIR-TLVTWTSMISGYSQHG 473
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 203/420 (48%), Gaps = 19/420 (4%)
Query: 12 QLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLST 69
QL +AL+ + + PS Y ++L C +H + I S +
Sbjct: 159 QLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHGYTIKYRALSITSIGN 218
Query: 70 KVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQN-GYDENALLVFSAMLRSGVR 128
+ YAK G + SA +AF +P++NV++WT MIS A++ Y E L +F ML GV
Sbjct: 219 SLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYTELGLTLFLDMLMDGVL 278
Query: 129 ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWIL 188
N+FT +S + C L G+ +Q K N+ VK++ + LY + G ++A
Sbjct: 279 PNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRF 338
Query: 189 FERIERKDVVSWNAMIGGLA--MQGFNDD---------SFWLFRSMMRQGMKPDCFTLGS 237
FE ++ +++WNAMI G A M+ DD + +FR++ R MKPD FT S
Sbjct: 339 FEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSS 398
Query: 238 ILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
IL + L + QIH IK G S + +L+++Y K G I A + + M
Sbjct: 399 ILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRT 458
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
+++ T++ISG+++ +EA LF+DM + +++ +L+ C+ A L + +
Sbjct: 459 LVTWTSMISGYSQ-HGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACS-YAGLAEKAEHY 516
Query: 358 AFAFKYQSSYDAAVGN--ALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHG 414
K + + V + ++DM+ + G + DA G + N W+SL+AG HG
Sbjct: 517 FDMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHG 576
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 156/326 (47%), Gaps = 15/326 (4%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T S++ C + + A G ++N+ + + Y + G+ A + F+ M
Sbjct: 283 TLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEM 342
Query: 92 PERNVVSWTAMISGYAQ---NGYDE--------NALLVFSAMLRSGVRANQFTYSSALRA 140
+ ++++W AMISGYAQ D+ AL VF + RS ++ + FT+SS L
Sbjct: 343 DDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSV 402
Query: 141 CARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSW 200
C+ M L+ G I K F+ ++ V SAL+++Y KCG IEDA F + + +V+W
Sbjct: 403 CSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVTW 462
Query: 201 NAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLII- 259
+MI G + G ++ LF M G++P+ T +L A K D++
Sbjct: 463 TSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAEHYFDMMKE 522
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQ-LYRSMLKTDIISCTALISGFARDDNHSKEA 318
+ +E G ++D++ + G + A+ + R+ + + ++L++G R + + A
Sbjct: 523 EYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAG-CRSHGNMELA 581
Query: 319 FDLFKDMI-LKKMGIDDVILCLMLNI 343
F +I L+ GI+ +L L + I
Sbjct: 582 FYAADRLIELRPKGIETYVLLLNMYI 607
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 107/209 (51%), Gaps = 6/209 (2%)
Query: 15 QALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVI 72
QALK + + + P T+ S+L C A Q IHA I G+ S++ +++ ++
Sbjct: 376 QALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALV 435
Query: 73 IFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQF 132
Y K G + A KAF M R +V+WT+MISGY+Q+G + A+ +F M +GVR N+
Sbjct: 436 NMYNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEI 495
Query: 133 TYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK-SALLDLYAKCGWIEDAWILFER 191
T+ L AC+ + +++ +E + ++D++ + G ++DA+ R
Sbjct: 496 TFVCVLSACSYAGLAEKAEHYFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRR 555
Query: 192 --IERKDVVSWNAMIGGLAMQGFNDDSFW 218
E + + W++++ G G + +F+
Sbjct: 556 TGFEPNEAI-WSSLVAGCRSHGNMELAFY 583
>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
Length = 735
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 177/519 (34%), Positives = 294/519 (56%), Gaps = 6/519 (1%)
Query: 63 SNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAM 122
SN+++ T ++ Y K+G V AR+ FD MP+RN SW+ M++GYA E A +F M
Sbjct: 151 SNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLM 210
Query: 123 LRS-GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
L ++F ++ L A + L G + G I K ++ + V+++L+ +YAK G
Sbjct: 211 LEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGC 270
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
+ A+ +FE ++ ++W+AMI G A G D + +F M G P FT +L A
Sbjct: 271 MGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNA 330
Query: 242 S--VGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
S +G + + K Q H L++KLG E + +L+D+YAK G I A + + + + DI+
Sbjct: 331 SSDLGALAVGK--QAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIV 388
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
TA++SG ++ H +EA L+ M + + + L CA +A+L G+Q+H
Sbjct: 389 LWTAMVSGHVQNGEH-EEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQ 447
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
KY A VG+AL MY+K G + D F + D++VI+W S+I+G++++G G+ A
Sbjct: 448 IVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGA 507
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD 479
++L+++MK EG +P+++TF+++L ACSH GL GWE F+ M Y + PR +H++C+VD
Sbjct: 508 LDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVD 567
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVN 539
+ +R G L+ A + I + I LW +LGAC + +G A L ++ S
Sbjct: 568 ILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSSA 627
Query: 540 YVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
Y++LSNIY + W++ + R LM R + K+PG S+++
Sbjct: 628 YILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVE 666
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 131/478 (27%), Positives = 253/478 (52%), Gaps = 11/478 (2%)
Query: 47 RQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVL--SARKAFDRMPE--RNVVSWTAM 102
R +HA + +G S+ ++ +I FY+ + L +A FD +P R+V SW ++
Sbjct: 29 RHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVTSWNSL 88
Query: 103 ISGYAQNGYDENALLVFSAMLRSG-VRANQFTYSSALRACARMRWLQGGRMIQG-SIQKG 160
++ + + +AL F +ML S V + ++++A A AR G + +
Sbjct: 89 LNPLSGH-RPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIP 147
Query: 161 RFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLF 220
V N++V ++LL++Y K G + DA +F+ + +++ SW+ M+ G A + ++++F LF
Sbjct: 148 SAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLF 207
Query: 221 RSMMRQ-GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAK 279
R M+ + + F ++L A + L+ Q+H LI+K GL + SL+ +YAK
Sbjct: 208 RLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAK 267
Query: 280 YGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCL 339
G + +A+ ++ S + + I+ +A+I+G+A+ + + A +F M +
Sbjct: 268 AGCMGAAFHVFESSRERNSITWSAMITGYAQ-NGEADSAVSMFSQMHAAGFTPTEFTFVG 326
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN 399
+LN +++ +L +G+Q H K V +AL+DMYAK G IADA FD++ + +
Sbjct: 327 VLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVD 386
Query: 400 VISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFT 459
++ WT++++G+ ++G EA+ LY +M EG++P+ T S L AC+ G +L T
Sbjct: 387 IVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHT 446
Query: 460 DMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
++ KY + A S + ++++ G LE ++ R++ + + W++I+ S G
Sbjct: 447 QIV-KYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIA-WNSIISGFSQNG 502
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 168/302 (55%), Gaps = 1/302 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H I+ +G + + ++ YAK G + +A F+ ERN ++W+AMI+GYAQNG
Sbjct: 242 MHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGE 301
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
++A+ +FS M +G +FT+ L A + + L G+ G + K F ++VKSA
Sbjct: 302 ADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSA 361
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+D+YAKCG I DA F+++ D+V W AM+ G G ++++ L+ M ++G+ P
Sbjct: 362 LVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPS 421
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
T+ S LRA G L Q+H I+K GL + +L +Y+K G++ ++R
Sbjct: 422 KSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFR 481
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
+ D+I+ ++ISGF++ + A DLF++M ++ D++ +L C+++ ++
Sbjct: 482 RIPDRDVIAWNSIISGFSQ-NGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVD 540
Query: 352 LG 353
G
Sbjct: 541 RG 542
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 118/210 (56%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T++ +L D A H ++ G+E +++ + ++ YAK G + A++ FD++
Sbjct: 323 TFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQL 382
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
E ++V WTAM+SG+ QNG E AL +++ M + G+ ++ T +S LRACA + L+ G+
Sbjct: 383 YEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGK 442
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ I K V SAL +Y+KCG +ED +F RI +DV++WN++I G + G
Sbjct: 443 QLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNG 502
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
+ + LF M +G PD T +IL A
Sbjct: 503 CGNGALDLFEEMKMEGTIPDNITFINILCA 532
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 88/193 (45%), Gaps = 3/193 (1%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNG 60
+V + + G+ ++AL + PS T S L+ C A +H I+ G
Sbjct: 393 MVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYG 452
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+ + + Y+K G++ F R+P+R+V++W ++ISG++QNG AL +F
Sbjct: 453 LGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFE 512
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGR-FVENLFVKSALLDLYAKC 179
M G + T+ + L AC+ M + G + K L + ++D+ ++
Sbjct: 513 EMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRA 572
Query: 180 GWIEDAWILFERI 192
G +++A E I
Sbjct: 573 GMLKEAKDFIESI 585
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 187/572 (32%), Positives = 314/572 (54%), Gaps = 4/572 (0%)
Query: 9 KTGQLKQALK--FSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K G L++AL + + D T+ +L+ C R +HAH++ G+ +
Sbjct: 174 KVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVD 233
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ ++ YAK GD+++ARK FD M + +SW AMI+G+ +N E L +F ML +
Sbjct: 234 VLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENE 293
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
V+ N T +S A + + + + G K F ++ ++L+ +Y G + DA
Sbjct: 294 VQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAG 353
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+F R+E KD +SW AMI G GF D + ++ M + PD T+ S L A
Sbjct: 354 KIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLG 413
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
L ++H+L G + +L+++YAK I A ++++ M + D++S +++I+
Sbjct: 414 RLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIA 473
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
GF + + S EA F+ M L + + V L+ CA +L G++IHA+ +
Sbjct: 474 GFCFN-HRSFEALYYFRYM-LGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIG 531
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
+ V NAL+D+Y K G+ + A F +K+V+SW +++G+ HG G A+ L+ +M
Sbjct: 532 SEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQM 591
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
G P++VTF++LL ACS G+ +GWELF M K+ I+P +H++C+VDL +R G+
Sbjct: 592 VEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGK 651
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
L AYN+I +M IKP A++W A+L C I+ + LGELAA+ + ++EP +V+L ++
Sbjct: 652 LTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDL 711
Query: 547 YTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
YT AG W + RK M E+ L ++ G S+++
Sbjct: 712 YTDAGKWAQVARVRKTMREKGLEQDNGCSWVE 743
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 167/572 (29%), Positives = 275/572 (48%), Gaps = 22/572 (3%)
Query: 4 VRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYES 63
+RA GQL QAL S P+ D Y++L + C ++A A
Sbjct: 71 LRALCSHGQLAQALWLLESSPEPP-DEGAYVALFRLCEWRRAVDAGMRACARADAEHPSF 129
Query: 64 NLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML 123
L L ++ + G++ A + F +MPER+V SW M+ GY + G+ E AL ++ ML
Sbjct: 130 GLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRML 189
Query: 124 RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIE 183
+G+R + +T+ LR C + + GR + + + F + + V +AL+ +YAKCG I
Sbjct: 190 WAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIV 249
Query: 184 DAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV 243
A +F+ + D +SWNAMI G + LF +M+ ++P+ T+ S+ AS
Sbjct: 250 AARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASG 309
Query: 244 GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTA 303
E+ ++H +K G SLI +Y G + A +++ M D +S TA
Sbjct: 310 MLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTA 369
Query: 304 LISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY 363
+ISG+ ++ K A +++ M L + DDV + L CA + L++G ++H A
Sbjct: 370 MISGYEKNGFPDK-ALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNK 428
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELY 423
V NAL++MYAKS I A F M +K+V+SW+S+IAG+ + EA+ +
Sbjct: 429 GFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYF 488
Query: 424 KKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM----INKYRILPRAEHFSCVVD 479
+ M + PN VTF++ L AC+ TG G E+ + I +P A ++D
Sbjct: 489 RYMLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNA-----LLD 542
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDM-----EP 534
L+ + GQ A+ + K S W+ +L +G LG++A +LF+ E
Sbjct: 543 LYVKCGQTSYAWAQFSVHSEKDVVS-WNIMLSGFVAHG---LGDIAL-SLFNQMVEMGEH 597
Query: 535 EKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
V +V L + AG + +M E+
Sbjct: 598 PDEVTFVALLCACSRAGMVIQGWELFHMMTEK 629
>gi|356561794|ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 615
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 178/549 (32%), Positives = 302/549 (55%), Gaps = 6/549 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
TY LL+ C + + + ++H H++ G++++ + T ++ Y+K V SAR+ FD M
Sbjct: 48 TYPLLLKACANLPSIQHGTMLHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEM 107
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG-- 149
P+R+VVSW AM+S Y++ + AL + M G T+ S L + + +
Sbjct: 108 PQRSVVSWNAMVSAYSRRSSMDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHL 167
Query: 150 -GRMIQGSIQK-GRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ I + K G + + ++L+ +Y + +++A +F+ ++ K ++SW MIGG
Sbjct: 168 LGKSIHCCLIKLGIVYLEVSLANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGY 227
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
G +++ LF M Q + D +++ + +L+ S +H L++K G +
Sbjct: 228 VKIGHAVEAYGLFYQMQHQSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKD 287
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ LI +YAK G++ SA +++ +++ ++S T++I+G+ H EA DLF+ MI
Sbjct: 288 PVENLLITMYAKCGNLTSARRIFDLIIEKSMLSWTSMIAGYVHL-GHPGEALDLFRRMIR 346
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ + L +++ CA++ SL++G++I + F D V +LI MY+K G I
Sbjct: 347 TDIRPNGATLATVVSACADLGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVK 406
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKH-EGMVPNDVTFLSLLFACS 446
A F+ + DK++ WTS+I YA HG G+EAI L+ KM EG++P+ + + S+ ACS
Sbjct: 407 AREVFERVTDKDLTVWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACS 466
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
H+GL EG + F M + I P EH +C++DL R GQL+ A N I+ M A +W
Sbjct: 467 HSGLVEEGLKYFKSMQKDFGITPTVEHCTCLIDLLGRVGQLDLALNAIQGMPPDVQAQVW 526
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
+L AC I+GN LGELA L D P S +YV+++N+YT+ G W A R M+ +
Sbjct: 527 GPLLSACRIHGNVELGELATVRLLDSSPGSSGSYVLMANLYTSLGKWKEAHMMRNSMDGK 586
Query: 567 SLRKNPGYS 575
L K G+S
Sbjct: 587 GLVKESGWS 595
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 137/446 (30%), Positives = 237/446 (53%), Gaps = 23/446 (5%)
Query: 82 LSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC 141
+S R +F R++ +W MI NG+ L ++S+M SGV N TY L+AC
Sbjct: 1 MSLRPSF----RRSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKAC 56
Query: 142 ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN 201
A + +Q G M+ G + K F + FV++AL+D+Y+KC + A +F+ + ++ VVSWN
Sbjct: 57 ANLPSIQHGTMLHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWN 116
Query: 202 AMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQ-IHDLI 258
AM+ + + D + L + M G +P T SIL +++ E + + IH +
Sbjct: 117 AMVSAYSRRSSMDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCL 176
Query: 259 IKLG---LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHS 315
IKLG LE S L SL+ +Y ++ + A +++ M + IIS T +I G+ + H+
Sbjct: 177 IKLGIVYLEVS--LANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVK-IGHA 233
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNAL 375
EA+ LF M + +GID V+ +++ C V L L +H+ K + V N L
Sbjct: 234 VEAYGLFYQMQHQSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLL 293
Query: 376 IDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND 435
I MYAK G + A R FD + +K+++SWTS+IAGY G+ EA++L+++M + PN
Sbjct: 294 ITMYAKCGNLTSARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNG 353
Query: 436 VTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEH----FSCVVDLFARRGQLESAY 491
T +++ AC+ G G E I +Y L E + ++ ++++ G + A
Sbjct: 354 ATLATVVSACADLGSLSIGQE-----IEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAR 408
Query: 492 NMIRQMNIKPTASLWSAILGACSIYG 517
+ ++ K ++W++++ + +I+G
Sbjct: 409 EVFERVTDKDL-TVWTSMINSYAIHG 433
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 137/268 (51%), Gaps = 2/268 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D +++L+ CI + A +H+ ++ G + +I YAK G++ SAR+
Sbjct: 250 IDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNLTSARRI 309
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD + E++++SWT+MI+GY G+ AL +F M+R+ +R N T ++ + ACA + L
Sbjct: 310 FDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSACADLGSL 369
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ I+ I + V+++L+ +Y+KCG I A +FER+ KD+ W +MI
Sbjct: 370 SIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTDKDLTVWTSMINSY 429
Query: 208 AMQGFNDDSFWLFRSMMR-QGMKPDCFTLGSI-LRASVGGIELMKISQIHDLIIKLGLES 265
A+ G +++ LF M +G+ PD S+ L S G+ + + G+
Sbjct: 430 AIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEEGLKYFKSMQKDFGITP 489
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ + LID+ + G + A + M
Sbjct: 490 TVEHCTCLIDLLGRVGQLDLALNAIQGM 517
>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
Length = 735
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 177/519 (34%), Positives = 294/519 (56%), Gaps = 6/519 (1%)
Query: 63 SNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAM 122
SN+++ T ++ Y K+G V AR+ FD MP+RN SW+ M++GYA E A +F M
Sbjct: 151 SNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLM 210
Query: 123 LRS-GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
L ++F ++ L A + L G + G I K ++ + V+++L+ +YAK G
Sbjct: 211 LEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGC 270
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
+ A+ +FE ++ ++W+AMI G A G D + +F M G P FT +L A
Sbjct: 271 MGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNA 330
Query: 242 S--VGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
S +G + + K Q H L++KLG E + +L+D+YAK G I A + + + + DI+
Sbjct: 331 SSDLGALAVGK--QAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIV 388
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
TA++SG ++ H +EA L+ M + + + L CA +A+L G+Q+H
Sbjct: 389 LWTAMVSGHVQNGEH-EEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQ 447
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
KY A VG+AL MY+K G + D F + D++VI+W S+I+G++++G G+ A
Sbjct: 448 IVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGA 507
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD 479
++L+++MK EG +P+++TF+++L ACSH GL GWE F+ M Y + PR +H++C+VD
Sbjct: 508 LDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVD 567
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVN 539
+ +R G L+ A + I + I LW +LGAC + +G A L ++ S
Sbjct: 568 ILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTRDSSA 627
Query: 540 YVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
Y++LSNIY + W++ + R LM R + K+PG S+++
Sbjct: 628 YILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVE 666
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/478 (27%), Positives = 254/478 (53%), Gaps = 11/478 (2%)
Query: 47 RQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVL--SARKAFDRMPE--RNVVSWTAM 102
R +HA + +G S+ ++ +I FY+ + L +A FD +P R+V SW ++
Sbjct: 29 RHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVASWNSL 88
Query: 103 ISGYAQNGYDENALLVFSAMLRSG-VRANQFTYSSALRACARMRWLQGGRMIQG-SIQKG 160
++ +++ +AL F +ML S V + ++++A A AR G + +
Sbjct: 89 LNPLSRH-RPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIP 147
Query: 161 RFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLF 220
V N++V ++LL++Y K G + DA +F+ + +++ SW+ M+ G A + ++++F LF
Sbjct: 148 SAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLF 207
Query: 221 RSMMRQ-GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAK 279
R M+ + + F ++L A + L+ Q+H LI+K GL + SL+ +YAK
Sbjct: 208 RLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAK 267
Query: 280 YGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCL 339
G + +A+ ++ S + + I+ +A+I+G+A+ + + A +F M +
Sbjct: 268 AGCMGAAFHVFESSRERNSITWSAMITGYAQ-NGEADSAVSMFSQMHAAGFTPTEFTFVG 326
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN 399
+LN +++ +L +G+Q H K V +AL+DMYAK G IADA FD++ + +
Sbjct: 327 VLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVD 386
Query: 400 VISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFT 459
++ WT++++G+ ++G EA+ LY +M EG++P+ T S L AC+ G +L T
Sbjct: 387 IVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHT 446
Query: 460 DMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
++ KY + A S + ++++ G LE ++ R++ + + W++I+ S G
Sbjct: 447 QIV-KYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIA-WNSIISGFSQNG 502
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 168/302 (55%), Gaps = 1/302 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H I+ +G + + ++ YAK G + +A F+ ERN ++W+AMI+GYAQNG
Sbjct: 242 MHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGE 301
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
++A+ +FS M +G +FT+ L A + + L G+ G + K F ++VKSA
Sbjct: 302 ADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSA 361
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+D+YAKCG I DA F+++ D+V W AM+ G G ++++ L+ M ++G+ P
Sbjct: 362 LVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPS 421
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
T+ S LRA G L Q+H I+K GL + +L +Y+K G++ ++R
Sbjct: 422 KSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFR 481
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
+ D+I+ ++ISGF++ + A DLF++M ++ D++ +L C+++ ++
Sbjct: 482 RIPDRDVIAWNSIISGFSQ-NGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVD 540
Query: 352 LG 353
G
Sbjct: 541 RG 542
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 118/210 (56%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T++ +L D A H ++ G+E +++ + ++ YAK G + A++ FD++
Sbjct: 323 TFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQL 382
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
E ++V WTAM+SG+ QNG E AL +++ M + G+ ++ T +S LRACA + L+ G+
Sbjct: 383 YEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGK 442
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ I K V SAL +Y+KCG +ED +F RI +DV++WN++I G + G
Sbjct: 443 QLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNG 502
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
+ + LF M +G PD T +IL A
Sbjct: 503 CGNGALDLFEEMKMEGTIPDNITFINILCA 532
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 88/193 (45%), Gaps = 3/193 (1%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNG 60
+V + + G+ ++AL + PS T S L+ C A +H I+ G
Sbjct: 393 MVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYG 452
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+ + + Y+K G++ F R+P+R+V++W ++ISG++QNG AL +F
Sbjct: 453 LGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFE 512
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGR-FVENLFVKSALLDLYAKC 179
M G + T+ + L AC+ M + G + K L + ++D+ ++
Sbjct: 513 EMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRA 572
Query: 180 GWIEDAWILFERI 192
G +++A E I
Sbjct: 573 GMLKEAKDFIESI 585
>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
Length = 1012
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 189/544 (34%), Positives = 297/544 (54%), Gaps = 1/544 (0%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
++L+ I A A +H+ G++ N + + +I Y+ V A F+ + +
Sbjct: 167 TMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRK 226
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
+ V WTAM+S Y++N ENA VFS M SG + N F +S L+A + + G+ I
Sbjct: 227 DAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIH 286
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND 214
G K V ALLD+YAKCG I+DA + FE I DV+ + MI A N+
Sbjct: 287 GCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNE 346
Query: 215 DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLI 274
+F LF +MR + P+ ++L S+L+A ++L QIH+ IK+G ES + +L+
Sbjct: 347 QAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALM 406
Query: 275 DVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD 334
D YAK + S+ +++ S+ + +S ++ GF++ +EA +F +M +M
Sbjct: 407 DFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQS-GLGEEALSVFCEMQAAQMPCTQ 465
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE 394
V +L CA+ AS+ QIH K + D +GN+LID YAK G I DA + F
Sbjct: 466 VTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQH 525
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG 454
+ ++++ISW ++I+GYA HG +A+EL+ +M + ND+TF++LL CS TGL G
Sbjct: 526 LMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHG 585
Query: 455 WELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACS 514
LF M + I P EH++C+V L R G+L A I + P+A +W A+L +C
Sbjct: 586 LSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCI 645
Query: 515 IYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGY 574
I+ N +LG +A + ++EP+ YV+LSN+Y AAG+ D RK M +RK PG
Sbjct: 646 IHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGL 705
Query: 575 SFLQ 578
S+++
Sbjct: 706 SWVE 709
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 155/524 (29%), Positives = 264/524 (50%), Gaps = 18/524 (3%)
Query: 37 LQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIF--YAKVGDVLSARKAFDRMPER 94
LQ CI + R +H H++ G L L ++ Y K+G + SAR+ FDRMPER
Sbjct: 66 LQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPER 125
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM--RWLQGGRM 152
N+VS+ ++ +AQ G E A +F + G NQF ++ L+ M L GG
Sbjct: 126 NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGG-- 183
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF 212
+ K N FV S L+D Y+ C + DA +F I RKD V W AM+ +
Sbjct: 184 VHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDC 243
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS 272
+++F +F M G KP+ F L S+L+A+V ++ IH IK ++ + G+
Sbjct: 244 PENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGA 303
Query: 273 LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI 332
L+D+YAK G I+ A + + D+I + +IS +A+ N +++AF+LF ++ +
Sbjct: 304 LLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQ-SNQNEQAFELFLRLMRSSVLP 362
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAF 392
++ L +L C N+ L+ G+QIH A K D VGNAL+D YAK ++ + + F
Sbjct: 363 NEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIF 422
Query: 393 DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTC 452
+ D N +SW +++ G+++ G G EA+ ++ +M+ M VT+ S+L AC+ T
Sbjct: 423 SSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIR 482
Query: 453 EGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
++ I K + ++D +A+ G + A + + + + S W+AI+
Sbjct: 483 HAGQIHCS-IEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIIS-WNAIISG 540
Query: 513 CSIYGNTSLGELAARNLFDMEPEKSV-----NYVVLSNIYTAAG 551
+++G + A LFD + +V +V L ++ ++ G
Sbjct: 541 YALHGQAA----DALELFDRMNKSNVESNDITFVALLSVCSSTG 580
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
TY S+L+ C + R A IH I + + ++ + +I YAK G + A K F +
Sbjct: 467 TYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHL 526
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA 142
ER+++SW A+ISGYA +G +AL +F M +S V +N T+ + L C+
Sbjct: 527 MERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCS 577
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 181/558 (32%), Positives = 310/558 (55%), Gaps = 4/558 (0%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L D +T +++L C + + IH + G ++ ++ ++ Y+K G + A+
Sbjct: 131 LPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQM 190
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAM-LRSGVRANQFTYSSALRACARMR 145
FD+ +N VSW MI G GY A +F M ++ + N+ T + L AC +
Sbjct: 191 LFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEIS 250
Query: 146 WLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
L+ + + G SI+ G F + V + + YAKCG + A +F +E K V SWNA+I
Sbjct: 251 QLRSLKELHGYSIRHG-FQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALI 309
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
GG A G + L+ M G+ PD FT+GS+L AS L ++H +++ GLE
Sbjct: 310 GGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLE 369
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ + SL+ +Y G SA L+ M + +S A+ISG++++ ++A LF+
Sbjct: 370 IDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQN-GLPEDALILFRK 428
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
++ D+ + +L C+ ++L LG++ H +A K D V + IDMYAKSG
Sbjct: 429 LVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGC 488
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
I ++ FD + +K++ SW ++IA Y HG G E+IEL+++M+ G +P+ TF+ +L
Sbjct: 489 IKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTV 548
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
CSH GL EG + F +M N + I P+ EH++CV+D+ R G+L+ A ++ +M +P +
Sbjct: 549 CSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSR 608
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
+WS++L C +G +G++ A L ++EP+ NYV LSN+Y +G WD+ R+ R++++
Sbjct: 609 VWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIK 668
Query: 565 ERSLRKNPGYSFLQSSKK 582
+ L+K+ G S+++ K
Sbjct: 669 DIGLQKDAGCSWIELGGK 686
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 144/494 (29%), Positives = 268/494 (54%), Gaps = 8/494 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ +++ C +IH +I G ++ + +I Y K G V +A K F
Sbjct: 30 DNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVF 89
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAML--RSGVRANQFTYSSALRACARMRW 146
MP RN+VSW ++ISG+++NG+ ++ + M+ G+ + T + L CAR
Sbjct: 90 HYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVD 149
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
+Q G I G K E++ V ++L+D+Y+KCG++ +A +LF++ RK+ VSWN MIGG
Sbjct: 150 VQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGG 209
Query: 207 LAMQGFNDDSFWLFRSM-MRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
L +G+ ++F LFR M M++ ++ + T+ +IL A + +L + ++H I+ G +
Sbjct: 210 LCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQY 269
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ + YAK G + A +++ SM + S ALI G A++ + ++A +L+ M
Sbjct: 270 DELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGD-PRKALNLYIQM 328
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ D + +L A++ SL G+++H F ++ D+ +G +L+ +Y GE
Sbjct: 329 TYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGES 388
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
+ A FD M +K+ +SW ++I+GY+++G +A+ L++K+ +G P+D+ +S+L AC
Sbjct: 389 SSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGAC 448
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSC-VVDLFARRGQLESAYNMIRQMNIKPTAS 504
S G E T +L +C +D++A+ G ++ + ++ + K AS
Sbjct: 449 SQQSALRLGKE--THCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLAS 506
Query: 505 LWSAILGACSIYGN 518
W+AI+ A ++G+
Sbjct: 507 -WNAIIAAYGVHGD 519
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 192/394 (48%), Gaps = 19/394 (4%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
D ++ T +++L C++ R +H + I +G++ + ++ + YAK G ++ A
Sbjct: 231 DIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICA 290
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
+ F M + V SW A+I G AQNG AL ++ M SG+ + FT S L A A +
Sbjct: 291 ERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHL 350
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
+ L+ G+ + G + + + F+ +LL LY CG A +LF+ +E K VSWNAMI
Sbjct: 351 KSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMI 410
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G + G +D+ LFR ++ G +P + S+L A L + H +K L
Sbjct: 411 SGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLM 470
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ S ID+YAK G I+ + ++ + D+ S A+I+ + + +E+ +LF+
Sbjct: 471 EDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGD-GEESIELFER 529
Query: 325 MILKKMG--IDDVILCLMLNICANVASLNLG-------RQIHAFAFKYQSSYDAAVGNAL 375
M +K+G D +L +C++ + G + H K + +
Sbjct: 530 M--RKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHY------ACV 581
Query: 376 IDMYAKSGEIADANRAFDEMGDK-NVISWTSLIA 408
+DM ++G + DA R EM ++ + W+SL++
Sbjct: 582 MDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLS 615
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 123/270 (45%), Gaps = 31/270 (11%)
Query: 317 EAFDLFKDMIL-KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNAL 375
+A D+F +I + D+ ++ C LG IH K D VGNAL
Sbjct: 13 DAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNAL 72
Query: 376 IDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM--KHEGMVP 433
I MY K G + A + F M +N++SW S+I+G++++G+ + ++ +M EG++P
Sbjct: 73 IAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLP 132
Query: 434 NDVTFLSLLFACS-----HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLE 488
+ T +++L C+ G+ G + + R+ + +VD++++ G L
Sbjct: 133 DIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRV------NNSLVDMYSKCGYLT 186
Query: 489 SAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF---DMEPEKSVNYVVLSN 545
A M+ N + A W+ ++G G A NLF M+ + VN V + N
Sbjct: 187 EA-QMLFDKNNRKNAVSWNTMIGGLCTKGYI----FEAFNLFREMQMQEDIEVNEVTVLN 241
Query: 546 IYTAAGAWDNARKTRKLMEERSLRKNPGYS 575
I A ++ + RSL++ GYS
Sbjct: 242 ILPAC---------LEISQLRSLKELHGYS 262
>gi|225457491|ref|XP_002267777.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22070
[Vitis vinifera]
gi|296087996|emb|CBI35279.3| unnamed protein product [Vitis vinifera]
Length = 598
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 184/582 (31%), Positives = 308/582 (52%), Gaps = 25/582 (4%)
Query: 19 FSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKV 78
F L ++ D Y +LL+ + + + +HA +I ++L L+ ++ YAK
Sbjct: 24 FRLIFTNSTHDEDLYATLLRRFAETRDSQHGRALHAKLIKGPLHNSLFLNNHILNMYAKC 83
Query: 79 GDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSAL 138
G + A K FD P RN VSW+ +I+G+ Q+ AL++FS M +GV N+FT SAL
Sbjct: 84 GHLPHAHKLFDHFPHRNAVSWSVLIAGFVQHNRPSCALVLFSQMHAAGVNINEFTLVSAL 143
Query: 139 RACA-------------RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
AC+ +L + + + F N+F+ + + + + +A
Sbjct: 144 HACSLYDNDSDNNEGYYYSYYLSRLYQVYAFVVRLGFEWNVFLMNVFMTALIRSRKLAEA 203
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFND-DSFWLFRSMMRQGMKPDCFTLGSILRASV- 243
+FE KDVVSWNA++ GL + FW R M +G+KPD F +L
Sbjct: 204 LEVFEACRGKDVVSWNAVMAGLVQFCCGEVPGFW--RRMCCEGVKPDNFAFSGVLSGLAA 261
Query: 244 ---GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
GG+ + Q+H ++K G + SL+D+Y K GS+ + + + M++ D+ +
Sbjct: 262 LGDGGMGV----QVHGQLVKCGHGGEVCIGNSLVDMYLKCGSLENGIKAFEEMVERDVCT 317
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
+ +G + A +L ++M + ++ L L CAN+ASL G++ H
Sbjct: 318 WNQMAAG-CLNCGKPGRALELIEEMRRSGVRMNKFTLATALTACANLASLEEGKKAHGLR 376
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
K + D V NAL+DMYAK G + DA + F + ++V+SWT++I G+A++G +A+
Sbjct: 377 IKLGNDVDVCVDNALLDMYAKCGSMGDALKVFGTVEARSVVSWTTMIMGFAQNGQARKAL 436
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDL 480
E++++M+ EG PN +TF+ +L+ACS GL EGWE F M + I P +H++C+VD+
Sbjct: 437 EIFEQMRAEGKAPNYITFICVLYACSQGGLINEGWEYFLSMDRDHGISPGEDHYACMVDM 496
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNY 540
R G ++ A +IR+M + + +W +LGAC ++G+ G LAA+ ++ S Y
Sbjct: 497 LGRAGHIKEARELIRRMPFQASVLVWQTLLGACRVHGDVETGLLAAKQALSLDKHDSSTY 556
Query: 541 VVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
VVLSN++ W R+LME R ++K PG S++Q +K+
Sbjct: 557 VVLSNMFADGRNWKGVGSLRELMETRDVKKMPGSSWIQLNKR 598
>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 796
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 186/560 (33%), Positives = 308/560 (55%), Gaps = 13/560 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY + L C R+ +HA + G + +S ++ YA+ GD+ AR+ F
Sbjct: 113 DRFTYAAALAACSRAGRLREGKAVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVF 172
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM--RW 146
D ER+ VSW A++SGY + G ++ L VF+ M RSG+ N F S ++ CA
Sbjct: 173 DAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPV 232
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
+ + G + K F ++F+ SA++ +YAK G + +A LF+ + +VV +NAMI G
Sbjct: 233 MDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAG 292
Query: 207 L----AMQGFN--DDSFWLFRSMMRQGMKPDCFTLGSILRAS--VGGIELMKISQIHDLI 258
L A G + ++ L+ + +GM+P FT S++RA G IE K QIH +
Sbjct: 293 LCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGK--QIHGQV 350
Query: 259 IKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEA 318
+K + + + +LID+Y G + ++ + S+ K D+++ TA+ISG +++ + A
Sbjct: 351 LKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFER-A 409
Query: 319 FDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDM 378
LF +++ + D + ++N CA++A G QI FA K A+GN+ I M
Sbjct: 410 LTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHM 469
Query: 379 YAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTF 438
YA+SG++ A R F EM +++SW+++I+ +A+HG +A+ + +M +VPN++TF
Sbjct: 470 YARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITF 529
Query: 439 LSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMN 498
L +L ACSH GL EG + + M +Y + P +H +CVVDL R G+L A IR
Sbjct: 530 LGVLTACSHGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSI 589
Query: 499 IKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARK 558
+W ++L +C I+ + G+L A + +++P S +YV L NIY AG A K
Sbjct: 590 FHDEPVIWRSLLASCRIHRDMERGQLVADRIMELQPSSSASYVNLYNIYLDAGELSLASK 649
Query: 559 TRKLMEERSLRKNPGYSFLQ 578
R +M+ER ++K PG S+++
Sbjct: 650 IRDVMKERGVKKEPGLSWIE 669
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 147/505 (29%), Positives = 263/505 (52%), Gaps = 39/505 (7%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y+ L+ C A R A +HAHI+ +L L ++ Y ++G AR+ D MP
Sbjct: 20 YLHHLRSC---SAPRHAAAVHAHIVRAHPSPSLFLRNTLLAAYCRLGG--HARRLLDEMP 74
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRS-GVRANQFTYSSALRACARMRWLQGGR 151
N VS+ +I Y++ G E +L F+ RS GVRA++FTY++AL AC+R L+ G+
Sbjct: 75 RTNAVSFNLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGK 134
Query: 152 MIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ S+ +G +FV ++L+ +YA+CG + A +F+ + +D VSWNA++ G
Sbjct: 135 AVHALSVLEG-IAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRA 193
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIE-LMKI-SQIHDLIIKLGLESSNK 268
G DD +F M R G+ + F LGS+++ G + +M I + +H ++K G +S
Sbjct: 194 GAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVF 253
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDD-----NHSKEAFDLFK 323
L +++ +YAK G++ A L++S+L +++ A+I+G RD+ + +EA L+
Sbjct: 254 LASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYS 313
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
++ + M + ++ C + G+QIH K+ D +G+ALID+Y SG
Sbjct: 314 EVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSG 373
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
+ D R F + ++V++WT++I+G ++ A+ L+ ++ G+ P+ T S++
Sbjct: 374 CMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMN 433
Query: 444 ACSHTGL-----------TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYN 492
AC+ + T G+ FT M N SC + ++AR G + +A
Sbjct: 434 ACASLAVARTGEQIQCFATKSGFGRFTAMGN-----------SC-IHMYARSGDVHAAVR 481
Query: 493 MIRQMNIKPTASLWSAILGACSIYG 517
++M S WSA++ + + +G
Sbjct: 482 RFQEMESHDIVS-WSAVISSHAQHG 505
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 195/583 (33%), Positives = 318/583 (54%), Gaps = 44/583 (7%)
Query: 34 MSLLQFCIDKKAERQAHLIHAHIITNG-YESNLHLST--KVIIFYAKVGDVLSARKAFDR 90
+SLL C K + LIHA +I G + +N LS ++ + + A F+
Sbjct: 37 LSLLHNC---KTLQSLRLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFET 93
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+ E N++ W M G+A + +AL ++ M+ G+ N +T+ L++CA+ + + G
Sbjct: 94 IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEG 153
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLY-------------------------------AKC 179
+ I G + K + +LFV ++L+ +Y A
Sbjct: 154 QQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASR 213
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G+IE A LF+ I KDVVSWNAMI G A G ++ LF+ MM+ ++PD T+ +++
Sbjct: 214 GYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVV 273
Query: 240 RASV--GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
A G IEL + Q+H I G S+ K+ SL+D+Y+K G + +A L+ +L D
Sbjct: 274 SACAQSGSIELGR--QVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKD 331
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
+IS LI G+ N KEA LF++M+ +DV + +L CA++ ++++GR IH
Sbjct: 332 VISWNTLIGGYTHM-NLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIH 390
Query: 358 AFAFK-YQSSYDAA-VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGY 415
+ K +S+ +A+ + +LIDMYAK G+I A++ F+ + K++ SW ++I G+A HG
Sbjct: 391 VYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGR 450
Query: 416 GHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFS 475
A +++ +M+ G+ P+D+TF+ LL ACS +G+ G +F M Y+I P+ EH+
Sbjct: 451 ADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYG 510
Query: 476 CVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPE 535
C++DL G + A MI M ++P +W ++L AC I GN LGE A+NL +EPE
Sbjct: 511 CMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPE 570
Query: 536 KSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
YV+LSNIY AG W+ K R L+ ++ ++K PG S ++
Sbjct: 571 NPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIE 613
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 137/415 (33%), Positives = 215/415 (51%), Gaps = 44/415 (10%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ LL+ C KA ++ IH H++ GY+ +L + T +I Y + G + ARK FDR
Sbjct: 136 TFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRS 195
Query: 92 PERNVVSWTAMISGYAQNGYDEN-------------------------------ALLVFS 120
P R+VVS+TA+I GYA GY E+ AL +F
Sbjct: 196 PHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 255
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M+++ +R ++ T + + ACA+ ++ GR + I F NL + ++L+DLY+KCG
Sbjct: 256 EMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCG 315
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+E A LFE + KDV+SWN +IGG ++ LF+ M+R G +P+ T+ SIL
Sbjct: 316 ELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILP 375
Query: 241 --ASVGGIELMKISQIHDLIIKLGLESSN--KLTGSLIDVYAKYGSIRSAYQLYRSMLKT 296
A +G I++ + IH I K ++N L SLID+YAK G I +A+Q++ S+L
Sbjct: 376 ACAHLGAIDIGR--WIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK 433
Query: 297 DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI--DDVILCLMLNICANVASLNLGR 354
+ S A+I GFA + AFD+F M +K+GI DD+ +L+ C+ L+LGR
Sbjct: 434 SLSSWNAMIFGFAM-HGRADAAFDIFSRM--RKIGIEPDDITFVGLLSACSRSGMLDLGR 490
Query: 355 QI-HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLI 407
I Y+ + +ID+ SG +A + M + + + W SL+
Sbjct: 491 HIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLL 545
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 187/408 (45%), Gaps = 48/408 (11%)
Query: 9 KTGQLKQALKFSLSCPDTLLDP--STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+TG K+AL+ T + P ST ++++ C + +H+ I +G+ SNL
Sbjct: 243 ETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLK 302
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ ++ Y+K G++ +A F+ + ++V+SW +I GY + ALL+F MLRSG
Sbjct: 303 IVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG 362
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQK--GRFVENLFVKSALLDLYAKCGWIED 184
R N T S L ACA + + GR I I K ++++L+D+YAKCG IE
Sbjct: 363 ERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEA 422
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG 244
A +F I K + SWNAMI G AM G D +F +F M + G++PD T
Sbjct: 423 AHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITF--------- 473
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
+GL S+ +G ++D+ R+ Q Y+ K + C
Sbjct: 474 ----------------VGLLSACSRSG-MLDLGRHI--FRTMTQDYKITPKLEHYGCMID 514
Query: 305 ISGFARDDNHS---KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF 361
+ G HS KEA ++ +M +M D VI C +L C ++ LG
Sbjct: 515 LLG------HSGLFKEAEEMINNM---EMEPDGVIWCSLLKACKIRGNVELGESFAQNLI 565
Query: 362 KYQSSYDAAVGNALIDMYAKSG---EIADANRAFDEMGDKNVISWTSL 406
K + + L ++YA +G E+A ++ G K V +S+
Sbjct: 566 KIEPE-NPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSI 612
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 197/593 (33%), Positives = 328/593 (55%), Gaps = 24/593 (4%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLL-------DPSTYMSLLQFCIDKKAERQAHLIHA 54
+++ A + G ++A+ C LL D T+ +L+ C R+ IH
Sbjct: 144 SMISAYVRNGHFREAI----DCFYQLLLVTKFQADFYTFPPVLKACQTLVDGRK---IHC 196
Query: 55 HIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDEN 114
+ G++ ++ ++ +I Y++ G V AR FD MP R++ SW AMISG QNG
Sbjct: 197 WVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQ 256
Query: 115 ALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLD 174
AL V M G+ + T +S L CA++ + +I + K LFV +AL++
Sbjct: 257 ALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALIN 316
Query: 175 LYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFW---LFRSMMRQGMKPD 231
+YAK G + DA +F+++ +DVVSWN++I NDD F M G++PD
Sbjct: 317 MYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQ---NDDPVTARGFFFKMQLNGLEPD 373
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLG-LESSNKLTGSLIDVYAKYGSIRSAYQLY 290
TL S+ + + +H I++ G L + + +++D+YAK G I SA++++
Sbjct: 374 LLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVF 433
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI-LKKMGIDDVILCLMLNICANVAS 349
+ D++S LISG+ ++ + EA ++++ M +++ ++ +L A+V +
Sbjct: 434 NLIPVKDVVSWNTLISGYTQN-GLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGA 492
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
L G +IH K D VG LID+Y K G + DA F ++ ++ + W ++I+
Sbjct: 493 LQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISC 552
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
+ HG+G +A++L+++M+ EG+ P+ VTF+SLL ACSH+GL EG + F ++ +Y I P
Sbjct: 553 HGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEG-KWFFHLMQEYGIKP 611
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
+H+ C+VDL R G LE AY+ I+ M + P AS+W A+LGAC I+GN LG+ A+ L
Sbjct: 612 SLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRL 671
Query: 530 FDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
F+++ E YV+LSNIY G W+ K R L ER L+K PG+S ++ +++
Sbjct: 672 FEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRR 724
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 153/530 (28%), Positives = 284/530 (53%), Gaps = 16/530 (3%)
Query: 49 AHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQ 108
A +HA ++ +G + +S +++ YA +GDV +R FD++ ++V +W +MIS Y +
Sbjct: 92 AKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVR 151
Query: 109 NGYDENALLVF-SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLF 167
NG+ A+ F +L + +A+ +T+ L+AC L GR I + K F ++F
Sbjct: 152 NGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQT---LVDGRKIHCWVFKLGFQWDVF 208
Query: 168 VKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
V ++L+ +Y++ G++ A LF+ + +D+ SWNAMI GL G + + M +G
Sbjct: 209 VAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 268
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
+ D T+ SIL ++ + IH +IK GLE ++ +LI++YAK+G++ A
Sbjct: 269 INMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQ 328
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
++++ M D++S ++I+ + ++D+ A F M L + D + L + +I A
Sbjct: 329 KVFQQMFLRDVVSWNSIIAAYEQNDD-PVTARGFFFKMQLNGLEPDLLTLVSLASIAAQS 387
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAV-GNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
R +H F + +A V GNA++DMYAK G I A++ F+ + K+V+SW +L
Sbjct: 388 RDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTL 447
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVP-NDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
I+GY ++G EAIE+Y+ M+ + N T++S+L A +H G +G + +I K
Sbjct: 448 ISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLI-KT 506
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
+ +C++DL+ + G+L A + Q+ + ++ W+AI+ I+G+ GE A
Sbjct: 507 NLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVP-RESSVPWNAIISCHGIHGH---GEKA 562
Query: 526 ARNLFDMEPE----KSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKN 571
+ +M+ E V ++ L + + +G D + LM+E ++ +
Sbjct: 563 LKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEYGIKPS 612
>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
Length = 629
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 177/519 (34%), Positives = 294/519 (56%), Gaps = 6/519 (1%)
Query: 63 SNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAM 122
SN+++ T ++ Y K+G V AR+ FD MP+RN SW+ M++GYA E A +F M
Sbjct: 45 SNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLM 104
Query: 123 LRS-GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
L ++F ++ L A + L G + G I K ++ + V+++L+ +YAK G
Sbjct: 105 LEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGC 164
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
+ A+ +FE ++ ++W+AMI G A G D + +F M G P FT +L A
Sbjct: 165 MGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNA 224
Query: 242 S--VGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
S +G + + K Q H L++KLG E + +L+D+YAK G I A + + + + DI+
Sbjct: 225 SSDLGALAVGK--QAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIV 282
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
TA++SG ++ H +EA L+ M + + + L CA +A+L G+Q+H
Sbjct: 283 LWTAMVSGHVQNGEH-EEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQ 341
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
KY A VG+AL MY+K G + D F + D++VI+W S+I+G++++G G+ A
Sbjct: 342 IVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGA 401
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD 479
++L+++MK EG +P+++TF+++L ACSH GL GWE F+ M Y + PR +H++C+VD
Sbjct: 402 LDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVD 461
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVN 539
+ +R G L+ A + I + I LW +LGAC + +G A L ++ S
Sbjct: 462 ILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSSA 521
Query: 540 YVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
Y++LSNIY + W++ + R LM R + K+PG S+++
Sbjct: 522 YILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVE 560
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 197/356 (55%), Gaps = 4/356 (1%)
Query: 163 VENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRS 222
V N++V ++LL++Y K G + DA +F+ + +++ SW+ M+ G A + ++++F LFR
Sbjct: 44 VSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRL 103
Query: 223 MMRQ-GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYG 281
M+ + + F ++L A + L+ Q+H LI+K GL + SL+ +YAK G
Sbjct: 104 MLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAG 163
Query: 282 SIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLML 341
+ +A+ ++ S + + I+ +A+I+G+A+ + + A +F M + +L
Sbjct: 164 CMGAAFHVFESSRERNSITWSAMITGYAQ-NGEADSAVSMFSQMHAAGFTPTEFTFVGVL 222
Query: 342 NICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVI 401
N +++ +L +G+Q H K V +AL+DMYAK G IADA FD++ + +++
Sbjct: 223 NASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIV 282
Query: 402 SWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM 461
WT++++G+ ++G EA+ LY +M EG++P+ T S L AC+ G +L T +
Sbjct: 283 LWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQI 342
Query: 462 INKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
+ KY + A S + ++++ G LE ++ R++ + + W++I+ S G
Sbjct: 343 V-KYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIA-WNSIISGFSQNG 396
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 168/302 (55%), Gaps = 1/302 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H I+ +G + + ++ YAK G + +A F+ ERN ++W+AMI+GYAQNG
Sbjct: 136 MHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGE 195
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
++A+ +FS M +G +FT+ L A + + L G+ G + K F ++VKSA
Sbjct: 196 ADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSA 255
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+D+YAKCG I DA F+++ D+V W AM+ G G ++++ L+ M ++G+ P
Sbjct: 256 LVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPS 315
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
T+ S LRA G L Q+H I+K GL + +L +Y+K G++ ++R
Sbjct: 316 KSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFR 375
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
+ D+I+ ++ISGF++ + A DLF++M ++ D++ +L C+++ ++
Sbjct: 376 RIPDRDVIAWNSIISGFSQ-NGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVD 434
Query: 352 LG 353
G
Sbjct: 435 RG 436
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 118/210 (56%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T++ +L D A H ++ G+E +++ + ++ YAK G + A++ FD++
Sbjct: 217 TFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQL 276
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
E ++V WTAM+SG+ QNG E AL +++ M + G+ ++ T +S LRACA + L+ G+
Sbjct: 277 YEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGK 336
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ I K V SAL +Y+KCG +ED +F RI +DV++WN++I G + G
Sbjct: 337 QLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNG 396
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
+ + LF M +G PD T +IL A
Sbjct: 397 CGNGALDLFEEMKMEGTIPDNITFINILCA 426
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 2/150 (1%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNG 60
+V + + G+ ++AL + PS T S L+ C A +H I+ G
Sbjct: 287 MVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYG 346
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+ + + Y+K G++ F R+P+R+V++W ++ISG++QNG AL +F
Sbjct: 347 LGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFE 406
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGG 150
M G + T+ + L AC+ M + G
Sbjct: 407 EMKMEGTIPDNITFINILCACSHMGLVDRG 436
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 179/536 (33%), Positives = 297/536 (55%), Gaps = 8/536 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IHA +I + + + +S ++ Y+K G V +A K F PE +++SW MIS YAQN
Sbjct: 916 IHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNL 975
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACA---RMRWLQGGRMIQGSIQKGRFVENLFV 168
+ A+ F +LR G++ +QFT +S LRAC+ + G + K + + FV
Sbjct: 976 EMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFV 1035
Query: 169 KSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGM 228
+AL+DLY+K G +++A L D+ SWNA++ G + + F M G+
Sbjct: 1036 STALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGI 1095
Query: 229 KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQ 288
D TL + ++AS I L + QI IKLG + ++ ++D+Y K G + +A +
Sbjct: 1096 PIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALE 1155
Query: 289 LYRSMLKTDIISCTALISGFAR--DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICAN 346
L+ + + D ++ T +ISG+ D++H+ + L M + + D+ ++ +
Sbjct: 1156 LFGEISRPDEVAWTTMISGYIENGDEDHALSVYHL---MRVSGVQPDEYTFATLIKASSC 1212
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
+ +L G+QIHA K S D VG +L+DMY K G + DA R F +M + V+ W ++
Sbjct: 1213 LTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAM 1272
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYR 466
+ G A+HG+ EA+ L++ M+ G+ P+ VTF+ +L ACSH+GL E ++ F M Y
Sbjct: 1273 LLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYG 1332
Query: 467 ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAA 526
I P EH+SC+VD R G+++ A N+I M K +AS++ A+LGAC G+ + A
Sbjct: 1333 ITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVA 1392
Query: 527 RNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
L ++P S YV+LSNIY A+ WD+ R +M+ ++++K+PG+S++ K
Sbjct: 1393 DKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNK 1448
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/472 (27%), Positives = 236/472 (50%), Gaps = 20/472 (4%)
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
A K F N+ +W ++ + G A+ F +LRS + + T L A
Sbjct: 847 AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVG 906
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
L G I + K F + V ++L+++Y+K G + A F D++SWN M
Sbjct: 907 ADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTM 966
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIE---LMKISQIHDLIIK 260
I A ++ FR ++R G+KPD FTL S+LRA G E SQ+H IK
Sbjct: 967 ISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIK 1026
Query: 261 LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFD 320
G+ + + ++ +LID+Y+K G + A L D+ S A++ G+ + N S++A +
Sbjct: 1027 CGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIK-SNKSRKALE 1085
Query: 321 LFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYA 380
F M + ID++ L + + +L G+QI A+A K + D V + ++DMY
Sbjct: 1086 HFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYI 1145
Query: 381 KSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
K G++ +A F E+ + ++WT++I+GY ++G A+ +Y M+ G+ P++ TF +
Sbjct: 1146 KCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFAT 1205
Query: 441 LLFACSHTGLTCEGWELFTDMINKYRILPRAEHF--SCVVDLFARRGQLESAYNMIRQMN 498
L+ A S +G ++ +++ ++ +HF + +VD++ + G ++ AY + R+M+
Sbjct: 1206 LIKASSCLTALEQGKQIHANVV---KLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMD 1262
Query: 499 IKPTASLWSAILGACSIYGNTSLGELAARNLF------DMEPEKSVNYVVLS 544
++ W+A+L + +G+ A NLF ++P+K VLS
Sbjct: 1263 VRKVV-FWNAMLLGLAQHGHVD----EALNLFRTMQSNGIQPDKVTFIGVLS 1309
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 126/472 (26%), Positives = 230/472 (48%), Gaps = 48/472 (10%)
Query: 53 HAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQ--NG 110
HA I+T+G + +L+ +I Y+K G + SAR+ FD+ +R++V+W ++++ YAQ +
Sbjct: 634 HARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFADS 693
Query: 111 YDENALLVFS--AMLRS-GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLF 167
EN L F +LR G + T + L+ C ++Q + G K F +LF
Sbjct: 694 SYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLF 753
Query: 168 VKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
V AL+++Y K G + A +LF+++ +D V WN M+ F D++ F + R G
Sbjct: 754 VSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSG 813
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
PD S L +GG + + ++ K + Y A
Sbjct: 814 FXPDF----SNLHCVIGG-------------VNSDVSNNRKRHAEQVKAY--------AM 848
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKE---AFDLFKDMILKKMGIDDVILCLMLNIC 344
+++ ++I + ++ F H+ + A D FK ++ +G D V L ++L+
Sbjct: 849 KMFPFDQGSNIFAWNKKLTEFL----HAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAA 904
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWT 404
L+LG QIHA K + V N+L++MY+K+G + A + F + ++ISW
Sbjct: 905 VGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWN 964
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFT--DMI 462
++I+ YA++ EAI ++ + +G+ P+ T S+L ACS T + E FT +
Sbjct: 965 TMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACS----TGDEGEYFTLGSQV 1020
Query: 463 NKYR----ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
+ Y I+ + + ++DL+++ G+++ A ++ AS W+AI+
Sbjct: 1021 HVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLAS-WNAIM 1071
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 215/467 (46%), Gaps = 41/467 (8%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H + + G+E +L +S ++ Y K G V AR FD+MPER+ V W M+ Y +N +
Sbjct: 739 VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSF 798
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ AL FSA RSG + + + + GG S + R E VK+
Sbjct: 799 QDEALRFFSAFHRSGFXPD----------FSNLHCVIGGVNSDVSNNRKRHAEQ--VKAY 846
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
A +F + ++ +WN + G + F++++R + D
Sbjct: 847 -------------AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHD 893
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
TL IL A+VG +L QIH L+IK ++ SL+++Y+K G + +A + +
Sbjct: 894 SVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFI 953
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS-- 349
+ + D+IS +IS +A+ +N EA F+D++ + D L +L C+
Sbjct: 954 NSPELDLISWNTMISSYAQ-NNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGE 1012
Query: 350 -LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA 408
LG Q+H +A K D+ V ALID+Y+K G++ +A D ++ SW +++
Sbjct: 1013 YFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMF 1072
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS-----HTGLTCEGWELFTDMIN 463
GY K +A+E + M G+ +++T + + A G + + + N
Sbjct: 1073 GYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNN 1132
Query: 464 KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
+ S V+D++ + G + +A + +++ +P W+ ++
Sbjct: 1133 DLWV------SSGVLDMYIKCGDMPNALELFGEIS-RPDEVAWTTMI 1172
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 97/201 (48%), Gaps = 8/201 (3%)
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
R+++ +L + H I+ G LT +LI +Y+K GS+ SA Q++ D++
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678
Query: 300 SCTALISGFAR--DDNHSK--EAFDLFKDMILKKMGIDDVILCLMLNICANVAS--LNLG 353
+ ++++ +A+ D ++ E F LF +L++ G L L + + S + +
Sbjct: 679 TWNSILAAYAQFADSSYENVLEGFRLFG--LLREFGFSITRLTLAPLLKLCLLSGFVQVS 736
Query: 354 RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKH 413
+H +A K D V AL+++Y K G + A FD+M +++ + W ++ Y ++
Sbjct: 737 ETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVEN 796
Query: 414 GYGHEAIELYKKMKHEGMVPN 434
+ EA+ + G P+
Sbjct: 797 SFQDEALRFFSAFHRSGFXPD 817
>gi|15218851|ref|NP_171853.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180299|sp|Q9LR69.1|PPR8_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g03540
gi|9280645|gb|AAF86514.1|AC002560_7 F21B7.16 [Arabidopsis thaliana]
gi|91805735|gb|ABE65596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189463|gb|AEE27584.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 609
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 189/576 (32%), Positives = 317/576 (55%), Gaps = 10/576 (1%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K GQL +A++ S + P Y SLLQ C + HAH++ +G E++ +
Sbjct: 38 KLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRN 97
Query: 67 LSTKVIIFYAKVGDVL-SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
+ ++ Y K+G + R+ FD ++ +SWT+M+SGY AL VF M+
Sbjct: 98 VGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSF 157
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
G+ AN+FT SSA++AC+ + ++ GR G + F N F+ S L LY DA
Sbjct: 158 GLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDA 217
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR-QGMKPDCFTLGSILRASVG 244
+F+ + DV+ W A++ + +++ LF +M R +G+ PD T G++L A
Sbjct: 218 RRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGN 277
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
L + +IH +I G+ S+ + SL+D+Y K GS+R A Q++ M K + +S +AL
Sbjct: 278 LRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSAL 337
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
+ G+ ++ H K A ++F++M K D +L CA +A++ LG++IH +
Sbjct: 338 LGGYCQNGEHEK-AIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRG 392
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
+ V +ALID+Y KSG I A+R + +M +N+I+W ++++ A++G G EA+ +
Sbjct: 393 CFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFN 452
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
M +G+ P+ ++F+++L AC HTG+ EG F M Y I P EH+SC++DL R
Sbjct: 453 DMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRA 512
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTS-LGELAARNLFDMEPEKSVNYVVL 543
G E A N++ + + ASLW +LG C+ + S + E A+ + ++EP+ ++YV+L
Sbjct: 513 GLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLL 572
Query: 544 SNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQS 579
SN+Y A G +A RKLM R + K G S++ +
Sbjct: 573 SNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWIDA 608
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 179/536 (33%), Positives = 297/536 (55%), Gaps = 8/536 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IHA +I + + + +S ++ Y+K G V +A K F PE +++SW MIS YAQN
Sbjct: 916 IHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNL 975
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACA---RMRWLQGGRMIQGSIQKGRFVENLFV 168
+ A+ F +LR G++ +QFT +S LRAC+ + G + K + + FV
Sbjct: 976 EMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFV 1035
Query: 169 KSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGM 228
+AL+DLY+K G +++A L D+ SWNA++ G + + F M G+
Sbjct: 1036 STALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGI 1095
Query: 229 KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQ 288
D TL + ++AS I L + QI IKLG + ++ ++D+Y K G + +A +
Sbjct: 1096 PIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALE 1155
Query: 289 LYRSMLKTDIISCTALISGFAR--DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICAN 346
L+ + + D ++ T +ISG+ D++H+ + L M + + D+ ++ +
Sbjct: 1156 LFGEISRPDEVAWTTMISGYIENGDEDHALSVYHL---MRVSGVQPDEYTFATLIKASSC 1212
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
+ +L G+QIHA K S D VG +L+DMY K G + DA R F +M + V+ W ++
Sbjct: 1213 LTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAM 1272
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYR 466
+ G A+HG+ EA+ L++ M+ G+ P+ VTF+ +L ACSH+GL E ++ F M Y
Sbjct: 1273 LLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYG 1332
Query: 467 ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAA 526
I P EH+SC+VD R G+++ A N+I M K +AS++ A+LGAC G+ + A
Sbjct: 1333 ITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVA 1392
Query: 527 RNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
L ++P S YV+LSNIY A+ WD+ R +M+ ++++K+PG+S++ K
Sbjct: 1393 DKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNK 1448
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/472 (27%), Positives = 236/472 (50%), Gaps = 20/472 (4%)
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
A K F N+ +W ++ + G A+ F +LRS + + T L A
Sbjct: 847 AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVG 906
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
L G I + K F + V ++L+++Y+K G + A F D++SWN M
Sbjct: 907 ADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTM 966
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIE---LMKISQIHDLIIK 260
I A ++ FR ++R G+KPD FTL S+LRA G E SQ+H IK
Sbjct: 967 ISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIK 1026
Query: 261 LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFD 320
G+ + + ++ +LID+Y+K G + A L D+ S A++ G+ + N S++A +
Sbjct: 1027 CGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIK-SNKSRKALE 1085
Query: 321 LFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYA 380
F M + ID++ L + + +L G+QI A+A K + D V + ++DMY
Sbjct: 1086 HFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYI 1145
Query: 381 KSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
K G++ +A F E+ + ++WT++I+GY ++G A+ +Y M+ G+ P++ TF +
Sbjct: 1146 KCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFAT 1205
Query: 441 LLFACSHTGLTCEGWELFTDMINKYRILPRAEHF--SCVVDLFARRGQLESAYNMIRQMN 498
L+ A S +G ++ +++ ++ +HF + +VD++ + G ++ AY + R+M+
Sbjct: 1206 LIKASSCLTALEQGKQIHANVV---KLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMD 1262
Query: 499 IKPTASLWSAILGACSIYGNTSLGELAARNLF------DMEPEKSVNYVVLS 544
++ W+A+L + +G+ A NLF ++P+K VLS
Sbjct: 1263 VRKVV-FWNAMLLGLAQHGHVD----EALNLFRTMQSNGIQPDKVTFIGVLS 1309
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 126/472 (26%), Positives = 230/472 (48%), Gaps = 48/472 (10%)
Query: 53 HAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQ--NG 110
HA I+T+G + +L+ +I Y+K G + SAR+ FD+ +R++V+W ++++ YAQ +
Sbjct: 634 HARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFADS 693
Query: 111 YDENALLVFS--AMLRS-GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLF 167
EN L F +LR G + T + L+ C ++Q + G K F +LF
Sbjct: 694 SYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLF 753
Query: 168 VKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
V AL+++Y K G + A +LF+++ +D V WN M+ F D++ F + R G
Sbjct: 754 VSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSG 813
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
PD S L +GG + + ++ K + Y A
Sbjct: 814 FFPDF----SNLHCVIGG-------------VNSDVSNNRKRHAEQVKAY--------AM 848
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKE---AFDLFKDMILKKMGIDDVILCLMLNIC 344
+++ ++I + ++ F H+ + A D FK ++ +G D V L ++L+
Sbjct: 849 KMFPFDQGSNIFAWNKKLTEFL----HAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAA 904
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWT 404
L+LG QIHA K + V N+L++MY+K+G + A + F + ++ISW
Sbjct: 905 VGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWN 964
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFT--DMI 462
++I+ YA++ EAI ++ + +G+ P+ T S+L ACS T + E FT +
Sbjct: 965 TMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACS----TGDEGEYFTLGSQV 1020
Query: 463 NKYR----ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
+ Y I+ + + ++DL+++ G+++ A ++ AS W+AI+
Sbjct: 1021 HVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLAS-WNAIM 1071
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 215/467 (46%), Gaps = 41/467 (8%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H + + G+E +L +S ++ Y K G V AR FD+MPER+ V W M+ Y +N +
Sbjct: 739 VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSF 798
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ AL FSA RSG + + + + GG S + R E VK+
Sbjct: 799 QDEALRFFSAFHRSGFFPD----------FSNLHCVIGGVNSDVSNNRKRHAEQ--VKAY 846
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
A +F + ++ +WN + G + F++++R + D
Sbjct: 847 -------------AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHD 893
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
TL IL A+VG +L QIH L+IK ++ SL+++Y+K G + +A + +
Sbjct: 894 SVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFI 953
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS-- 349
+ + D+IS +IS +A+ +N EA F+D++ + D L +L C+
Sbjct: 954 NSPELDLISWNTMISSYAQ-NNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGE 1012
Query: 350 -LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA 408
LG Q+H +A K D+ V ALID+Y+K G++ +A D ++ SW +++
Sbjct: 1013 YFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMF 1072
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS-----HTGLTCEGWELFTDMIN 463
GY K +A+E + M G+ +++T + + A G + + + N
Sbjct: 1073 GYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNN 1132
Query: 464 KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
+ S V+D++ + G + +A + +++ +P W+ ++
Sbjct: 1133 DLWVS------SGVLDMYIKCGDMPNALELFGEIS-RPDEVAWTTMI 1172
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 97/201 (48%), Gaps = 8/201 (3%)
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
R+++ +L + H I+ G LT +LI +Y+K GS+ SA Q++ D++
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678
Query: 300 SCTALISGFAR--DDNHSK--EAFDLFKDMILKKMGIDDVILCLMLNICANVAS--LNLG 353
+ ++++ +A+ D ++ E F LF +L++ G L L + + S + +
Sbjct: 679 TWNSILAAYAQFADSSYENVLEGFRLFG--LLREFGFSITRLTLAPLLKLCLLSGFVQVS 736
Query: 354 RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKH 413
+H +A K D V AL+++Y K G + A FD+M +++ + W ++ Y ++
Sbjct: 737 ETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVEN 796
Query: 414 GYGHEAIELYKKMKHEGMVPN 434
+ EA+ + G P+
Sbjct: 797 SFQDEALRFFSAFHRSGFFPD 817
>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Glycine max]
Length = 849
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 190/578 (32%), Positives = 321/578 (55%), Gaps = 4/578 (0%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITNG 60
I+ K G+ + +LK + + P Y+ S+L C + IH +++ G
Sbjct: 226 IIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRG 285
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
++ ++ + +I FY K V + RK F+R+ +++VVSWT MI+G QN + +A+ +F
Sbjct: 286 FDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFV 345
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M+R G + + F +S L +C ++ LQ GR + K + FVK+ L+D+YAKC
Sbjct: 346 EMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCD 405
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+ +A +F+ + +VVS+NAMI G + Q ++ LFR M P T S+L
Sbjct: 406 SLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLG 465
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
S L SQIH LIIK G+ + +LIDVY+K + A ++ + DI+
Sbjct: 466 LSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVV 525
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
A+ SG+++ ++E+ L+KD+ + ++ ++ ++ +N+ASL G+Q H
Sbjct: 526 WNAMFSGYSQQ-LENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQV 584
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
K D V N+L+DMYAK G I ++++AF +++ W S+I+ YA+HG +A+
Sbjct: 585 IKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTNQRDIACWNSMISTYAQHGDAAKAL 644
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDL 480
E++++M EG+ PN VTF+ LL ACSH GL G+ F M +K+ I P +H++C+V L
Sbjct: 645 EVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLGFHHFESM-SKFGIEPGIDHYACMVSL 703
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNY 540
R G++ A +++M IKP A +W ++L AC + G+ LG AA +P S +Y
Sbjct: 704 LGRAGKIYEAKEFVKKMPIKPAAVVWRSLLSACRVSGHVELGTYAAEMAISCDPADSGSY 763
Query: 541 VVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
++LSNI+ + G W + R R+ M+ + K PG+S+++
Sbjct: 764 ILLSNIFASKGMWASVRMVREKMDMSRVVKEPGWSWIE 801
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 159/540 (29%), Positives = 291/540 (53%), Gaps = 9/540 (1%)
Query: 18 KFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFY 75
+F SC + P+ Y+ S+++ C QA +H ++ G+ ++++ T +I FY
Sbjct: 143 RFMRSCSEK---PNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFY 199
Query: 76 AKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYS 135
AK G V AR FD + + V+WTA+I+GYA+ G E +L +F+ M V +++ S
Sbjct: 200 AKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVIS 259
Query: 136 SALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERK 195
S L AC+ + +L+GG+ I G + + F ++ V + ++D Y KC ++ LF R+ K
Sbjct: 260 SVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDK 319
Query: 196 DVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIH 255
DVVSW MI G F+ D+ LF M+R+G KPD F S+L + L K Q+H
Sbjct: 320 DVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVH 379
Query: 256 DLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHS 315
IK+ +++ + + LID+YAK S+ +A +++ + +++S A+I G++R D
Sbjct: 380 AYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDK-L 438
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNAL 375
EA DLF++M L + +L + +++ L L QIH K+ S D+ G+AL
Sbjct: 439 VEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSAL 498
Query: 376 IDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND 435
ID+Y+K + DA F+E+ D++++ W ++ +GY++ E+++LYK ++ + PN+
Sbjct: 499 IDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNE 558
Query: 436 VTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIR 495
TF +++ A S+ G + F + + K + + +VD++A+ G +E ++
Sbjct: 559 FTFAAVIAAASNIASLRHGQQ-FHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFS 617
Query: 496 QMNIKPTASLWSAILGACSIYGNTSLG-ELAARNLFDMEPEKSVNYVVLSNIYTAAGAWD 554
N + A W++++ + +G+ + E+ R + + V +V L + + AG D
Sbjct: 618 STNQRDIAC-WNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLD 676
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/442 (31%), Positives = 241/442 (54%), Gaps = 17/442 (3%)
Query: 13 LKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHL-------------IHAHIITN 59
+ Q L FS P L P L+Q I ++ + L IHAHI+
Sbjct: 22 VSQTLHFSTLLP-PFLQPHDSPILIQRKIGRELGKLLQLPSPNILTSHYYKKIHAHIVVL 80
Query: 60 GY-ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLV 118
G+ + ++ L ++ Y+K+ A+K FD MP RN+V+W++M+S Y Q+GY ALL+
Sbjct: 81 GFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQHGYSVEALLL 140
Query: 119 FSAMLRS-GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYA 177
F +RS + N++ +S +RAC ++ L + G + KG FV++++V ++L+D YA
Sbjct: 141 FCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYA 200
Query: 178 KCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGS 237
K G++++A ++F+ ++ K V+W A+I G A G ++ S LF M + PD + + S
Sbjct: 201 KRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISS 260
Query: 238 ILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
+L A L QIH +++ G + + +ID Y K +++ +L+ ++ D
Sbjct: 261 VLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKD 320
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
++S T +I+G ++ H +A DLF +M+ K D +LN C ++ +L GRQ+H
Sbjct: 321 VVSWTTMIAGCMQNSFHG-DAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVH 379
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
A+A K D V N LIDMYAK + +A + FD + NV+S+ ++I GY++
Sbjct: 380 AYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLV 439
Query: 418 EAIELYKKMKHEGMVPNDVTFL 439
EA++L+++M+ P +TF+
Sbjct: 440 EALDLFREMRLSLSPPTLLTFV 461
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 192/560 (34%), Positives = 306/560 (54%), Gaps = 7/560 (1%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
+ + PSTY S + K R A A + + N+ +I YAK L A
Sbjct: 37 SFIPPSTYFSNHFILLYSKCGRLAWARKA--FQDISDPNVFSFNAIIAAYAKESRPLIAH 94
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
+ FD++PE ++VS+ +IS YA G AL +FS M G+ + FT S+ + AC
Sbjct: 95 QLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITACCDDV 154
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER-KDVVSWNAMI 204
L G ++ ++ G F + V +ALL Y K G ++DA +F + +D VSWN+MI
Sbjct: 155 GLIG-QLHSVAVSSG-FDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMI 212
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
+ LF+ M+R+G+ D FTL S+L A +L Q H +IK G
Sbjct: 213 VAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFH 272
Query: 265 SSNKLTGSLIDVYAKYGS-IRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
++ + LID+Y+K G + +++ + + D++ ++SG+++++ ++A + F+
Sbjct: 273 QNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFR 332
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ-SSYDAAVGNALIDMYAKS 382
M +D +++ C+N++S + G+QIH+ A K S +V NALI MY+K
Sbjct: 333 QMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKC 392
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
G + DA R FD M + N +S S+IAGYA+HG E++ L++ M + P +TF+S+L
Sbjct: 393 GNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVL 452
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
AC+HTG EGW F M K+ I P AEH+SC++DL R G+L A N+I +M P
Sbjct: 453 SACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPG 512
Query: 503 ASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKL 562
+ W+++LGAC +GN L AA + +EP + YVVLSN+Y +AG W+ RK
Sbjct: 513 SIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKF 572
Query: 563 MEERSLRKNPGYSFLQSSKK 582
M +R ++K PG S+++ K+
Sbjct: 573 MRDRGVKKKPGCSWIEVKKR 592
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN 399
+L C L+ G+ +H+ K N I +Y+K G +A A +AF ++ D N
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 400 VISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFT 459
V S+ ++IA YAK A +L+ ++ P+ V++ +L+ A + G T LF+
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIPE----PDLVSYNTLISAYADCGETAPALGLFS 129
Query: 460 DM 461
M
Sbjct: 130 GM 131
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 184/585 (31%), Positives = 324/585 (55%), Gaps = 10/585 (1%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNG 60
++R +G +Q++ L + P+ T+ LL+ C +A + LIH H G
Sbjct: 78 MIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILG 137
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMP--ERNVVSWTAMISGYAQNGYDENALLV 118
+L++ST ++ YAK G + A+ F+ + +R++V+W AMI+ ++ + +
Sbjct: 138 LSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHS 197
Query: 119 FSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
+ M ++GV N T S L + L G+ I + F +N+ +++ALLD+YAK
Sbjct: 198 VAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAK 257
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMM-RQGMKPDCFTLGS 237
C + A +F + +K+ V W+AMIGG + D+ L+ M+ G+ P TL +
Sbjct: 258 CHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLAT 317
Query: 238 ILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
+LRA +L + ++H +IK G++ + SLI +YAK G + +A M+ D
Sbjct: 318 MLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKD 377
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVI--LCLMLNICANVASLNLGRQ 355
+S +A+ISG ++ ++++A +F+ M + GI + + +L C+++A+L G
Sbjct: 378 TVSYSAIISGCVQN-GYAEKALLIFRQM--QSSGIAPYLETMIALLPACSHLAALQHGTC 434
Query: 356 IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGY 415
H + + D ++ NA+IDMY+K G+I + FD M ++++ISW ++I GY HG
Sbjct: 435 CHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGL 494
Query: 416 GHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFS 475
EA+ L+++++ G+ P+DVT +++L ACSH+GL EG F+ M + I PR H+
Sbjct: 495 CVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYI 554
Query: 476 CVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPE 535
C+VDL AR G L+ AY I++M P +W A+L AC + N +GE ++ + + PE
Sbjct: 555 CMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPE 614
Query: 536 KSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSS 580
+ N+V++SNIY++ G WD+A R + +K+PG S+++ S
Sbjct: 615 GTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEIS 659
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 143/534 (26%), Positives = 261/534 (48%), Gaps = 53/534 (9%)
Query: 68 STKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV 127
+T++ ++ ++ AR FD++P+ +VV W MI YA +G + ++ ++ ML+ GV
Sbjct: 44 ATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGV 103
Query: 128 RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWI 187
FT+ L+AC+ ++ LQ GR+I +L+V +ALL +YAKCG + A
Sbjct: 104 TPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQT 163
Query: 188 LFERI--ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGG 245
LF I + +D+V+WNAMI + + + M + G+ P+ TL SIL
Sbjct: 164 LFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQA 223
Query: 246 IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALI 305
L + IH I+ + L +L+D+YAK + A +++ ++ K + + +A+I
Sbjct: 224 NALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMI 283
Query: 306 SGFARDDNHSKEAFDLFKDMI-LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
G+ D+ S +A L+ DM+ + + L ML CA + L G+++H K
Sbjct: 284 GGYVLHDSIS-DALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSG 342
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
D VGN+LI MYAK G + +A DEM K+ +S++++I+G ++GY +A+ +++
Sbjct: 343 MDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFR 402
Query: 425 KMKHEGMVPNDVTFLSLLFACSHT-----GLTCEGWELFTDMINKYRILPRAEHFSCVVD 479
+M+ G+ P T ++LL ACSH G C G+ + N I + ++D
Sbjct: 403 QMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSIC------NAIID 456
Query: 480 LFARRGQLE----------------------------------SAYNMIRQMNIKPTASL 505
++++ G++ S + ++ + +KP
Sbjct: 457 MYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVT 516
Query: 506 WSAILGACSIYGNTSLGELAARNL---FDMEPEKSVNYVVLSNIYTAAGAWDNA 556
A+L ACS G + G+ ++ F+++P + +Y+ + ++ AG D A
Sbjct: 517 LIAVLSACSHSGLVTEGKYWFSSMSQNFNIKP-RMAHYICMVDLLARAGNLDEA 569
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 354 RQIHAFA---FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
RQI +F+ ++ S A L + EI A FD++ +V+ W +I Y
Sbjct: 23 RQIRSFSPHPHPHRVSDSDAAATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTY 82
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A G ++I LY M G+ P + TF LL ACS
Sbjct: 83 AWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACS 118
>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
Length = 857
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 187/572 (32%), Positives = 314/572 (54%), Gaps = 4/572 (0%)
Query: 9 KTGQLKQALK--FSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K G L++AL + + D T+ +L+ C R +HAH++ G+ +
Sbjct: 174 KVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVD 233
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ ++ YAK GD+++ARK FD M + +SW AMI+G+ +N E L +F ML +
Sbjct: 234 VLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENE 293
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
V+ N T +S A + + + + G K F ++ ++L+ +Y G + DA
Sbjct: 294 VQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAG 353
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+F R+E KD +SW AMI G GF D + ++ M + PD T+ S L A
Sbjct: 354 KIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLG 413
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
L ++H+L G + +L+++YAK I A ++++ M + D++S +++I+
Sbjct: 414 RLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIA 473
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
GF + + S EA F+ M L + + V L+ CA +L G++IHA+ +
Sbjct: 474 GFCFN-HRSFEALYYFRYM-LGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIG 531
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
+ V NAL+D+Y K G+ + A F +K+V+SW +++G+ HG G A+ L+ +M
Sbjct: 532 SEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQM 591
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
G P++VTF++LL ACS G+ +GWELF M K+ I+P +H++C+VDL +R G+
Sbjct: 592 VEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGK 651
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
L AYN+I +M IKP A++W A+L C I+ + LGELAA+ + ++EP +V+L ++
Sbjct: 652 LTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDL 711
Query: 547 YTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
YT AG W + RK M E+ L ++ G S+++
Sbjct: 712 YTDAGKWAQVARVRKTMREKGLEQDNGCSWVE 743
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 167/572 (29%), Positives = 275/572 (48%), Gaps = 22/572 (3%)
Query: 4 VRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYES 63
+RA GQL QAL S P+ D Y++L + C ++A A
Sbjct: 71 LRALCSHGQLAQALWLLESSPEPP-DEGAYVALFRLCEWRRAVDAGMRACARADAEHPSF 129
Query: 64 NLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML 123
L L ++ + G++ A + F +MPER+V SW M+ GY + G+ E AL ++ ML
Sbjct: 130 GLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRML 189
Query: 124 RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIE 183
+G+R + +T+ LR C + + GR + + + F + + V +AL+ +YAKCG I
Sbjct: 190 WAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIV 249
Query: 184 DAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV 243
A +F+ + D +SWNAMI G + LF +M+ ++P+ T+ S+ AS
Sbjct: 250 AARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASG 309
Query: 244 GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTA 303
E+ ++H +K G SLI +Y G + A +++ M D +S TA
Sbjct: 310 MLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTA 369
Query: 304 LISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY 363
+ISG+ ++ K A +++ M L + DDV + L CA + L++G ++H A
Sbjct: 370 MISGYEKNGFPDK-ALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNK 428
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELY 423
V NAL++MYAKS I A F M +K+V+SW+S+IAG+ + EA+ +
Sbjct: 429 GFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYF 488
Query: 424 KKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM----INKYRILPRAEHFSCVVD 479
+ M + PN VTF++ L AC+ TG G E+ + I +P A ++D
Sbjct: 489 RYMLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNA-----LLD 542
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDM-----EP 534
L+ + GQ A+ + K S W+ +L +G LG++A +LF+ E
Sbjct: 543 LYVKCGQTSYAWAQFSVHSEKDVVS-WNIMLSGFVAHG---LGDIAL-SLFNQMVEMGEH 597
Query: 535 EKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
V +V L + AG + +M E+
Sbjct: 598 PDEVTFVALLCACSRAGMVIQGWELFHMMTEK 629
>gi|357130605|ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 670
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 182/578 (31%), Positives = 309/578 (53%), Gaps = 4/578 (0%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGY 61
N A +L +A++ S PD + S F K +HA + G+
Sbjct: 95 NSCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAAFA-SWKGRATGDAVHALVQRIGF 153
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSA 121
S+L + + +I FY V ARK F+ M ER+VVSWT MIS +AQ G +N L
Sbjct: 154 ASDLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLMISAFAQCGQWDNVLRSLDE 213
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
M G + N+ T S L AC ++R + G + + + ++ +++AL+ +Y KCG
Sbjct: 214 MQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIRNALIGMYVKCGC 273
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
+ DAW F+ + ++ SWN +I G G + ++ +F M+ G+ PD TL S+L
Sbjct: 274 MSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVIPDVITLVSVLST 333
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC 301
+L + +H+ I + L SLI++YAK G + +A ++ +M + DI+S
Sbjct: 334 YAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIFENMARRDIVSW 393
Query: 302 TALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF 361
TA++ G+ + + AF+LF DM ++ + ++ L +L+ C+ + +L+ GR+IH++
Sbjct: 394 TAMVCGYVKGLQF-RTAFNLFDDMKVRDVMASEMALVSLLSACSQLGALDKGREIHSYIK 452
Query: 362 KYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIE 421
+ D + +AL+DMYAK G I A F M K ++W ++I G A G G EA+
Sbjct: 453 EKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIGGLASQGQGKEAVA 512
Query: 422 LYKK-MKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDL 480
L+++ +K P+ +T +L AC+H G+ EG F M+ I+P EH+ C+VDL
Sbjct: 513 LFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEGLHYFNLMLT-LGIVPDNEHYGCIVDL 571
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNY 540
R G L+ AYN I++M I+P +W ++L AC ++ LG++ +++ D+ P +
Sbjct: 572 LGRAGLLDEAYNFIQKMPIQPNPVIWGSLLAACRVHHRMELGKIIGQHIIDLAPNDVGAH 631
Query: 541 VVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
V++SN++ G WD+ + R +M R + K+PG+S +Q
Sbjct: 632 VLISNLHAEEGQWDDVEQVRGMMGSRRVEKSPGHSSIQ 669
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 145/505 (28%), Positives = 254/505 (50%), Gaps = 22/505 (4%)
Query: 22 SCPDTLLDPSTYMSLLQFCIDKK--AERQAHLIHAHIITNGYESNLHLSTKVIIFYAKV- 78
+C D+LL + L C + AE L+ AH+ S+ ++ +++ A
Sbjct: 16 ACRDSLL------AHLDACASRANLAELHGRLVRAHL-----GSDPCVAGRLVTLLASPV 64
Query: 79 --GDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSS 136
D+ ARK FDRM + + W MI GY +AL +F AM RSGV + +T ++
Sbjct: 65 SRHDMPYARKVFDRMAQPTAIVWNCMIRGYNSCHAPMDALELFRAMRRSGVSPDNYTMAA 124
Query: 137 ALRACARMRWLQG---GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE 193
++ A +G G + +Q+ F +LFV S L++ Y +EDA +FE +
Sbjct: 125 VAQSSAAFASWKGRATGDAVHALVQRIGFASDLFVMSGLINFYGASKSVEDARKVFEEMH 184
Query: 194 RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ 253
+DVVSW MI A G D+ M +G KP+ T+ S+L A + K
Sbjct: 185 ERDVVSWTLMISAFAQCGQWDNVLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLW 244
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN 313
++ + + G+E+ + +LI +Y K G + A++ ++ M + S LI GF ++
Sbjct: 245 VYARVDEYGIEADVDIRNALIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGK 304
Query: 314 HSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN 373
H KEA +F++M+ + D + L +L+ A + L GR +H + ++ D + N
Sbjct: 305 H-KEALTMFEEMLSDGVIPDVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQN 363
Query: 374 ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP 433
+LI+MYAK G++A A F+ M ++++SWT+++ GY K A L+ MK ++
Sbjct: 364 SLINMYAKCGDMAAAEIIFENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMA 423
Query: 434 NDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNM 493
+++ +SLL ACS G +G E+ + I + + S +VD++A+ G +++A +
Sbjct: 424 SEMALVSLLSACSQLGALDKGREIHS-YIKEKSVRTDMWLESALVDMYAKCGCIDAAAEI 482
Query: 494 IRQMNIKPTASLWSAILGACSIYGN 518
+M K T + W+A++G + G
Sbjct: 483 FSRMRHKQTLA-WNAMIGGLASQGQ 506
>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
Length = 667
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 194/548 (35%), Positives = 298/548 (54%), Gaps = 15/548 (2%)
Query: 36 LLQFCIDKKAERQAH-LIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
LLQ I+ +A AH L+H + N LS Y K G V A K FD +R
Sbjct: 56 LLQAYINSQALSDAHKLLHFMPQPSVVSYNTILSG-----YFKFGLVSEAIKLFDGTSKR 110
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
+ SW ++SG +N L F M S VR + FTY+ + C L G+ +
Sbjct: 111 DCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVRPDNFTYAIIIPCCD----LGFGQQVH 166
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND 214
I K + F+ + LL +YA+ G I DA +F+ + + +V+WNAMI + G D
Sbjct: 167 ADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDGMPSRGLVTWNAMISCYSKYGRGD 226
Query: 215 DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLI 274
S LFR + R+G+ D +T +L ++ + Q+H LII+ G S +L+
Sbjct: 227 KSIGLFRQLXREGISADEYTYAIVLNEFAARWQVFEAMQVHSLIIERGFCSDRFTNNALV 286
Query: 275 DVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD 334
++Y+K G + SA +L+ + D++S T +I GF + H +EA LF M L + +
Sbjct: 287 NLYSKCGYVASASRLFEEIPDQDVVSWTVIIVGFLQS-GHMEEAMWLFYQMQLGDIEPNS 345
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQS-SYDAAVGNALIDMYAKSGEIADANRAFD 393
+L CA+ + GR H K+ D VG+A++DMY+K GE+ DA RAF
Sbjct: 346 FTFGGLLGACADANAFQKGRHFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQ 405
Query: 394 EMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM---KHEGMVPNDVTFLSLLFACSHTGL 450
EM ++++ SW +I GYA++G G +A++LY +M G+ PN+VTF+ +L ACSH GL
Sbjct: 406 EMPERDIASWNGIICGYAQNGAGMKALKLYNEMVLLGPSGIAPNEVTFVGVLCACSHNGL 465
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
EG+ F +M++K+ I P AEH++C+VDL R G L+ A +I + IKP +W A+L
Sbjct: 466 LKEGYSYFKEMVDKHLIKPTAEHYTCMVDLLGRAGLLQEAEALILALPIKPDNVMWGALL 525
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
GAC ++G+ + A +L+ EP S NYV+L+N YT G W A + R++ME R + K
Sbjct: 526 GACKLHGDVQMTRRTAEHLYTNEPRNSSNYVLLANSYTDIGEWGEAVEIREVMEARGVEK 585
Query: 571 NPGYSFLQ 578
G S+++
Sbjct: 586 TAGCSWVE 593
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 211/416 (50%), Gaps = 16/416 (3%)
Query: 7 NFKTGQ-LKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNL 65
N K G+ L +K + C D TY ++ C D +Q +HA I+ + +
Sbjct: 125 NHKLGEGLTHFMK--MRCSSVRPDNFTYAIIIP-CCDLGFGQQ---VHADIVKVCSDLDA 178
Query: 66 HLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
+ T ++ YA+VG++ ARK FD MP R +V+W AMIS Y++ G + ++ +F + R
Sbjct: 179 FIGTNLLRMYAEVGEIGDARKVFDGMPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXRE 238
Query: 126 GVRANQFTYSSALRA-CARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIED 184
G+ A+++TY+ L AR + + ++ I++G F + F +AL++LY+KCG++
Sbjct: 239 GISADEYTYAIVLNEFAARWQVFEAMQVHSLIIERG-FCSDRFTNNALVNLYSKCGYVAS 297
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG 244
A LFE I +DVVSW +I G G +++ WLF M ++P+ FT G +L A
Sbjct: 298 ASRLFEEIPDQDVVSWTVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACAD 357
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGS-LIDVYAKYGSIRSAYQLYRSMLKTDIISCTA 303
K H L++K GL ++ + GS ++D+Y+K G + A + ++ M + DI S
Sbjct: 358 ANAFQKGRHFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQEMPERDIASWNG 417
Query: 304 LISGFARDDNHSKEAFDLFKDMIL---KKMGIDDVILCLMLNICANVASLNLGRQ-IHAF 359
+I G+A++ K A L+ +M+L + ++V +L C++ L G
Sbjct: 418 IICGYAQNGAGMK-ALKLYNEMVLLGPSGIAPNEVTFVGVLCACSHNGLLKEGYSYFKEM 476
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK-NVISWTSLIAGYAKHG 414
K+ A ++D+ ++G + +A + K + + W +L+ HG
Sbjct: 477 VDKHLIKPTAEHYTCMVDLLGRAGLLQEAEALILALPIKPDNVMWGALLGACKLHG 532
>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
Length = 771
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 186/557 (33%), Positives = 313/557 (56%), Gaps = 7/557 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
++ ++ +S++ C ++ E +H ++ +G +S ++L ++ Y K GD+ S+ +
Sbjct: 211 VNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYGKFGDLESSMRV 270
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F+ M E+N VSW + + +A G+ E+ L +F M V T SS L A + +
Sbjct: 271 FNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLLPALVDLGYF 330
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ + G + ++F+ ++L+D+YAK G +E A +FE IE ++VVSWNAMI L
Sbjct: 331 HLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNAMIANL 390
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS--VGGIELMKISQIHDLIIKLGLES 265
A G ++F L M + G P+ FTL ++L A V +++ K QIH I L S
Sbjct: 391 AQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGK--QIHAWSIHRSLMS 448
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
++ +LIDVYAK G + A ++ K D +S LI G+++ E+ LF+ M
Sbjct: 449 DLFVSNALIDVYAKCGQLSVAQDIFDRSEKDD-VSYNTLIVGYSQSQC-CFESLHLFQQM 506
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ D V L+ CAN+++ G++IH + + + N+L+D+Y K G +
Sbjct: 507 RSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLLNTHPFLANSLLDLYTKGGML 566
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A A++ F+ + K+V SW ++I GY HG A EL+ MK +G+ + V+++++L AC
Sbjct: 567 ATASKIFNRITRKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGVDYDHVSYIAVLSAC 626
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
SH GL G + F+ MI + I P+ H++C+VDL R GQL + +I M + +
Sbjct: 627 SHGGLVDRGKKYFSQMIAQ-NIKPQQMHYACMVDLLGRAGQLSESVEIITNMPFPANSDV 685
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
W A+LG+C I+G+ L LAA +LF+++PE S Y +L N+Y+ +G W+ A + + LM+
Sbjct: 686 WGALLGSCRIHGDIELARLAAEHLFELKPEHSGYYTLLRNMYSESGMWNEANEIKTLMKS 745
Query: 566 RSLRKNPGYSFLQSSKK 582
R ++KNP YS++QS K
Sbjct: 746 RKVQKNPAYSWVQSGNK 762
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 146/482 (30%), Positives = 255/482 (52%), Gaps = 20/482 (4%)
Query: 71 VIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
++ FYA G AR+ FD MP R++VSW +++S NG E+A M+RSG+ N
Sbjct: 153 LVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLTNGMLEDAKRAVVGMMRSGIPVN 212
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE 190
+ S + AC R G + G + K + + +AL+D+Y K G +E + +F
Sbjct: 213 VASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYGKFGDLESSMRVFN 272
Query: 191 RIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV--GGIEL 248
++ K+ VSWN+ +G A GF++D +FR M + P TL S+L A V G L
Sbjct: 273 GMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLLPALVDLGYFHL 332
Query: 249 MKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGF 308
K ++H I+ +ES + SL+D+YAK+G + A ++ ++ +++S A+I+
Sbjct: 333 GK--EVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNAMIANL 390
Query: 309 ARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYD 368
A++ + EAF L +M + L +L C+ VAS+ +G+QIHA++ D
Sbjct: 391 AQNGAET-EAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIHRSLMSD 449
Query: 369 AAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKH 428
V NALID+YAK G+++ A FD +K+ +S+ +LI GY++ E++ L+++M+
Sbjct: 450 LFVSNALIDVYAKCGQLSVAQDIFDR-SEKDDVSYNTLIVGYSQSQCCFESLHLFQQMRS 508
Query: 429 EGMVPNDVTFLSLLFACSHTGLTCEGWE----LFTDMINKYRILPRAEHFSCVVDLFARR 484
G+ + V+F+ L AC++ +G E L ++N + L + ++DL+ +
Sbjct: 509 AGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLLNTHPFLANS-----LLDLYTKG 563
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLS 544
G L +A + ++ K AS W+ ++ ++G + A LFD+ + V+Y +S
Sbjct: 564 GMLATASKIFNRITRKDVAS-WNTMILGYGMHGQIDV----AFELFDLMKDDGVDYDHVS 618
Query: 545 NI 546
I
Sbjct: 619 YI 620
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/460 (26%), Positives = 234/460 (50%), Gaps = 22/460 (4%)
Query: 47 RQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER--NVVSWTAMIS 104
R+AH A +++ ++L L+ +++ YA + D+ SAR P R + W ++
Sbjct: 22 RRAHA--ASLVSGALTASLPLAGALLLSYAALRDIPSARLILRHHPLRLRSAFLWNSLSR 79
Query: 105 GYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL------QGGRMIQGSIQ 158
A G AL V++ M+RSGVR + T+ AL A A +G + +++
Sbjct: 80 ALASAGLPSEALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPAKGAELHAAALR 139
Query: 159 KGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFW 218
+G + ++F + L+ YA G DA +F+ + +D+VSWN+++ L G +D+
Sbjct: 140 RGLLLADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLTNGMLEDAKR 199
Query: 219 LFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYA 278
MMR G+ + +L S++ A + +H L++K GL+S L +L+D+Y
Sbjct: 200 AVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYG 259
Query: 279 KYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILC 338
K+G + S+ +++ M + + +S + + FA H ++ ++F+ M ++ V L
Sbjct: 260 KFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFH-EDVLEMFRVMSEHEVTPGSVTLS 318
Query: 339 LMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK 398
+L ++ +LG+++H ++ + D + N+L+DMYAK G + A+ F+ + +
Sbjct: 319 SLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGR 378
Query: 399 NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT-----GLTCE 453
NV+SW ++IA A++G EA L +M+ G PN T ++LL ACS G
Sbjct: 379 NVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIH 438
Query: 454 GWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNM 493
W + +++ + + ++D++A+ GQL A ++
Sbjct: 439 AWSIHRSLMSDLFV------SNALIDVYAKCGQLSVAQDI 472
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 180/521 (34%), Positives = 288/521 (55%), Gaps = 17/521 (3%)
Query: 63 SNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAM 122
+++ + + +I A+ GD+ SARK FD + E+ VV WT +IS Y Q E A+ +F
Sbjct: 186 TDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDF 245
Query: 123 LRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWI 182
L G +++T SS + AC + ++ G + + F + V L+D+YAK I
Sbjct: 246 LEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSN-I 304
Query: 183 EDAW----ILFERIERKDVVSWNAMIGGLAMQGFNDDSFW-LFRSMMRQGMKPDCFTLGS 237
E A +FER+ + DV+SW A+I G G ++ LF M+ + +KP+ T S
Sbjct: 305 EQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSS 364
Query: 238 ILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
IL+A + Q+H +IK +++ + +L+ +YA+ G + A +++ + +
Sbjct: 365 ILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERS 424
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
+ISC + G +H D MGI +++ A+V L G+Q+H
Sbjct: 425 MISC--ITEGRDAPLDHRIGRMD---------MGISSSTFASLISAAASVGMLTKGQQLH 473
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
A K D V N+L+ MY++ G + DA R+F+E+ D+NVISWTS+I+G AKHGY
Sbjct: 474 AMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAE 533
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
A+ L+ M G+ PNDVT++++L ACSH GL EG E F M + ++PR EH++C+
Sbjct: 534 RALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACM 593
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKS 537
VDL AR G ++ A I +M +K A +W +LGAC + N +GE+AA+N+ ++EP
Sbjct: 594 VDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELEPRDP 653
Query: 538 VNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
YV+LSN+Y AG WD + R M + +L K G S+++
Sbjct: 654 APYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWME 694
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/459 (28%), Positives = 236/459 (51%), Gaps = 22/459 (4%)
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPE-RNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
++ ++ Y++ G V SAR FD M R++VSWTAM S A+NG + +LL+ ML S
Sbjct: 86 VANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERESLLLIGEMLES 145
Query: 126 GVRANQFTYSSALRAC--ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIE 183
G+ N +T + AC + L GG ++ + G + ++ V SAL+D+ A+ G +
Sbjct: 146 GLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGLWGTDIAVGSALIDMLARNGDLA 205
Query: 184 DAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-- 241
A +F+ + K VV W +I +++ +F + G +PD +T+ S++ A
Sbjct: 206 SARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEPDRYTMSSMISACT 265
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYG---SIRSAYQLYRSMLKTDI 298
+G + L Q+H L +++G S ++ L+D+YAK ++ A +++ M K D+
Sbjct: 266 ELGSVRLGL--QLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYANKVFERMRKNDV 323
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
IS TALISG+ + + LF +M+ + + + + +L CAN++ + GRQ+HA
Sbjct: 324 ISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSGRQVHA 383
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHE 418
K + VGNAL+ MYA+SG + +A R F+++ ++++IS + G +
Sbjct: 384 HVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMISCIT---------EGRD 434
Query: 419 AIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVV 478
A L ++ M + TF SL+ A + G+ +G +L M K + +V
Sbjct: 435 A-PLDHRIGRMDMGISSSTFASLISAAASVGMLTKGQQLHA-MTLKAGFGSDRFVSNSLV 492
Query: 479 DLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
+++R G LE A ++ + S W++++ + +G
Sbjct: 493 SMYSRCGYLEDACRSFNELKDRNVIS-WTSMISGLAKHG 530
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 204/412 (49%), Gaps = 27/412 (6%)
Query: 14 KQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKV 71
++A++ L + +P Y S++ C + + R +H+ + G+ S+ +S +
Sbjct: 236 EEAVEIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGL 295
Query: 72 IIFYAK--VGDVLS-ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLV-FSAMLRSGV 127
+ YAK + + A K F+RM + +V+SWTA+ISGY Q+G EN ++V F ML +
Sbjct: 296 VDMYAKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESI 355
Query: 128 RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWI 187
+ N TYSS L+ACA + GR + + K V +AL+ +YA+ G +E+A
Sbjct: 356 KPNHITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARR 415
Query: 188 LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIE 247
+F ++ + ++S +G + L + R M T S++ A+
Sbjct: 416 VFNQLYERSMIS-------CITEGRDAP---LDHRIGRMDMGISSSTFASLISAAASVGM 465
Query: 248 LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG 307
L K Q+H + +K G S ++ SL+ +Y++ G + A + + + ++IS T++ISG
Sbjct: 466 LTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISG 525
Query: 308 FARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSY 367
A+ +++ A LF DMIL + +DV +L+ C++V + G++ F+
Sbjct: 526 LAK-HGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEY----FRSMQRD 580
Query: 368 DAAVGN-----ALIDMYAKSGEIADANRAFDEMGDK-NVISWTSLIAGYAKH 413
+ ++D+ A+SG + +A +EM K + + W +L+ H
Sbjct: 581 HGLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSH 632
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 192/560 (34%), Positives = 306/560 (54%), Gaps = 7/560 (1%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
+ + PSTY S + K R A A + + N+ +I YAK L A
Sbjct: 37 SFIPPSTYFSNHFILLYSKCGRLAWARKA--FQDISDPNVFSFNAIIAAYAKESRPLIAH 94
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
+ FD++PE ++VS+ +IS YA G AL +FS M G+ + FT S+ + AC
Sbjct: 95 QLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCDDV 154
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER-KDVVSWNAMI 204
L G ++ ++ G F + V +ALL Y K G ++DA +F + +D VSWN+MI
Sbjct: 155 GLIG-QLHSVAVSSG-FDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMI 212
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
+ LF+ M+R+G+ D FTL S+L A +L Q H +IK G
Sbjct: 213 VAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFH 272
Query: 265 SSNKLTGSLIDVYAKYGS-IRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
++ + LID+Y+K G + +++ + + D++ ++SG+++++ ++A + F+
Sbjct: 273 QNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFR 332
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ-SSYDAAVGNALIDMYAKS 382
M +D +++ C+N++S + G+QIH+ A K S +V NALI MY+K
Sbjct: 333 QMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKC 392
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
G + DA R FD M + N +S S+IAGYA+HG E++ L++ M + P +TF+S+L
Sbjct: 393 GNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVL 452
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
AC+HTG EGW F M K+ I P AEH+SC++DL R G+L A N+I +M P
Sbjct: 453 SACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPG 512
Query: 503 ASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKL 562
+ W+++LGAC +GN L AA + +EP + YVVLSN+Y +AG W+ RK
Sbjct: 513 SIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKF 572
Query: 563 MEERSLRKNPGYSFLQSSKK 582
M +R ++K PG S+++ K+
Sbjct: 573 MRDRGVKKKPGCSWIEVKKR 592
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN 399
+L C L+ G+ +H+ K N I +Y+K G +A A +AF ++ D N
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 400 VISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFT 459
V S+ ++IA YAK A +L+ ++ P+ V++ +L+ A + G T LF+
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIPE----PDLVSYNTLISAYADCGETAPALGLFS 129
Query: 460 DM 461
M
Sbjct: 130 GM 131
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 177/533 (33%), Positives = 294/533 (55%), Gaps = 6/533 (1%)
Query: 48 QAHLIHAHIITNGYESNLHLSTKVIIFYA--KVGDVLSARKAFDRMPERNVVSWTAMISG 105
Q IHA ++ + ++K++ F A G + AR F+++P + ++I G
Sbjct: 55 QLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRG 114
Query: 106 YAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVEN 165
Y A+L + M+ G+ ++FT+ S ++C L G+ + K F +
Sbjct: 115 YTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCG---VLCEGKQLHCHSTKLGFASD 171
Query: 166 LFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR 225
++++ L+++Y+ CG + A +F+++ K VVSW MIG A ++ LFR M
Sbjct: 172 AYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEI 231
Query: 226 QGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRS 285
+KP+ TL ++L A +L Q+H I + G+ LT +L+DVY K G
Sbjct: 232 ASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPL 291
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
A L+ M + ++ +I+G D ++ +EA LF +M L + D V + +L C
Sbjct: 292 ARDLFNKMPEKNLFCWNIMINGHVEDSDY-EEALSLFNEMQLSGVKGDKVTMASLLIACT 350
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
++ +L LG+ +H + K + D A+G AL+DMYAK G I A R F EM +K+V++WT+
Sbjct: 351 HLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTA 410
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
LI G A G G +A+EL+ +M+ + P+ +TF+ +L ACSH GL EG F M NKY
Sbjct: 411 LIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKY 470
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
I P EH+ C+VD+ R G++ A ++I+ M + P + +L AC I+GN + E A
Sbjct: 471 GIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERA 530
Query: 526 ARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
A+ L +++P+ YV+LSNIY++ W+ A+K R+LM ER+++K PG S ++
Sbjct: 531 AQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIE 583
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 143/263 (54%), Gaps = 1/263 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T +++L C + A +H +I G + L++ ++ Y K G AR F++M
Sbjct: 240 TLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKM 299
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
PE+N+ W MI+G+ ++ E AL +F+ M SGV+ ++ T +S L AC + L+ G+
Sbjct: 300 PEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGK 359
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ I+K + ++ + +AL+D+YAKCG IE A +F+ + KDV++W A+I GLAM G
Sbjct: 360 WLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCG 419
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLT 270
+ LF M +KPD T +L A S G+ I+ + + K G++ S +
Sbjct: 420 QGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHY 479
Query: 271 GSLIDVYAKYGSIRSAYQLYRSM 293
G ++D+ + G I A L ++M
Sbjct: 480 GCMVDMLGRAGRIAEAEDLIQNM 502
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T SLL C A +H +I E ++ L T ++ YAK G + SA + F
Sbjct: 338 DKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVF 397
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
MPE++V++WTA+I G A G AL +F M S V+ + T+ L AC+ +
Sbjct: 398 QEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVN 457
Query: 149 GG 150
G
Sbjct: 458 EG 459
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 189/544 (34%), Positives = 297/544 (54%), Gaps = 1/544 (0%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
++L+ I A A +H+ G++ N + + +I Y+ V A F+ + +
Sbjct: 167 TMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRK 226
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
+ V WTAM+S Y++N ENA VFS M SG + N F +S L+A + + G+ I
Sbjct: 227 DAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIH 286
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND 214
G K V ALLD+YAKCG I+DA + FE I DV+ + MI A N+
Sbjct: 287 GCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNE 346
Query: 215 DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLI 274
+F LF +MR + P+ ++L S+L+A ++L QIH+ IK+G ES + +L+
Sbjct: 347 QAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALM 406
Query: 275 DVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD 334
D YAK + S+ +++ S+ + +S ++ GF++ +EA +F +M +M
Sbjct: 407 DFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQS-GLGEEALSVFCEMQAAQMPCTQ 465
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE 394
V +L CA+ AS+ QIH K + D +GN+LID YAK G I DA + F
Sbjct: 466 VTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQH 525
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG 454
+ ++++ISW ++I+GYA HG +A+EL+ +M + ND+TF++LL CS TGL G
Sbjct: 526 LMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHG 585
Query: 455 WELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACS 514
LF M + I P EH++C+V L R G+L A I + P+A +W A+L +C
Sbjct: 586 LSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCI 645
Query: 515 IYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGY 574
I+ N +LG +A + ++EP+ YV+LSN+Y AAG+ D RK M +RK PG
Sbjct: 646 IHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGL 705
Query: 575 SFLQ 578
S+++
Sbjct: 706 SWVE 709
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 155/524 (29%), Positives = 264/524 (50%), Gaps = 18/524 (3%)
Query: 37 LQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIF--YAKVGDVLSARKAFDRMPER 94
LQ CI + R +H H++ G L L ++ Y K+G + SAR+ FDRMPER
Sbjct: 66 LQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPER 125
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM--RWLQGGRM 152
N+VS+ ++ +AQ G E A +F + G NQF ++ L+ M L GG
Sbjct: 126 NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGG-- 183
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF 212
+ K N FV S L+D Y+ C + DA +F I RKD V W AM+ +
Sbjct: 184 VHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDC 243
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS 272
+++F +F M G KP+ F L S+L+A+V ++ IH IK ++ + G+
Sbjct: 244 PENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGA 303
Query: 273 LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI 332
L+D+YAK G I+ A + + D+I + +IS +A+ N +++AF+LF ++ +
Sbjct: 304 LLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQ-SNQNEQAFELFLRLMRSSVLP 362
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAF 392
++ L +L C N+ L+ G+QIH A K D VGNAL+D YAK ++ + + F
Sbjct: 363 NEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIF 422
Query: 393 DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTC 452
+ D N +SW +++ G+++ G G EA+ ++ +M+ M VT+ S+L AC+ T
Sbjct: 423 SSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIR 482
Query: 453 EGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
++ I K + ++D +A+ G + A + + + + S W+AI+
Sbjct: 483 HAGQIHCS-IEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIIS-WNAIISG 540
Query: 513 CSIYGNTSLGELAARNLFDMEPEKSV-----NYVVLSNIYTAAG 551
+++G + A LFD + +V +V L ++ ++ G
Sbjct: 541 YALHGQAA----DALELFDRMNKSNVESNDITFVALLSVCSSTG 580
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
TY S+L+ C + R A IH I + + ++ + +I YAK G + A K F +
Sbjct: 467 TYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHL 526
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA 142
ER+++SW A+ISGYA +G +AL +F M +S V +N T+ + L C+
Sbjct: 527 MERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCS 577
>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 684
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 184/547 (33%), Positives = 305/547 (55%), Gaps = 3/547 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
+ +SLL + E IH + + G +S + ++ Y K G V + + F+
Sbjct: 114 SVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNET 173
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
E+N VSW ++I+G A G +AL F M+ +G + N T SS L + + G+
Sbjct: 174 VEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGK 233
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I G + ++F+ ++L+D+YAK G +A +F ++R+++VSWNAMI A+
Sbjct: 234 EIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNR 293
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
++ M G P+ T ++L A L +IH + +++GL S ++
Sbjct: 294 LPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSN 353
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
SLID+YAK G + SA ++ + K D +S LI G++ D+ ++ +LF +M L
Sbjct: 354 SLIDMYAKCGCLHSARNVFNTSRK-DEVSYNILIIGYSETDD-CLQSLNLFSEMRLLGKK 411
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
D V +++ CAN+A+L G+++H A + V N+L+D Y K G I A R
Sbjct: 412 PDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRL 471
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLT 451
F+++ K+V SW ++I GY G AI +++ M+ + + + V+++++L ACSH GL
Sbjct: 472 FNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLV 531
Query: 452 CEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
GW+ F++M+ + R+ P H++C+VDL R G +E A +I+Q+ I P A++W A+LG
Sbjct: 532 ERGWQYFSEMLAQ-RLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLG 590
Query: 512 ACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKN 571
AC IYGN LG AA +LF+++P+ Y++LSNIY G WD A K R+LM+ R +KN
Sbjct: 591 ACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKN 650
Query: 572 PGYSFLQ 578
PG S++Q
Sbjct: 651 PGCSWVQ 657
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 150/522 (28%), Positives = 263/522 (50%), Gaps = 13/522 (2%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD T+ +L+ C D + +H + G+++++++ +++ Y G + AR+
Sbjct: 8 LDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRL 67
Query: 88 FDRMPERNVVSWTAMISGYAQNG-YDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FD MPER+VVSW +I + NG Y E F +LRS ++ N + S L A +
Sbjct: 68 FDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALED 127
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
+ R I K + +AL+D Y KCG ++ W +F K+ VSWN++I G
Sbjct: 128 EEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIING 187
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLGLES 265
LA +G D+ FR M+ G +P+ T+ SIL V +E K +IH +++G E+
Sbjct: 188 LACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLV-ELECFKAGKEIHGFSMRMGTET 246
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ SLID+YAK G A ++ ++ + +I+S A+I+ +A + EA M
Sbjct: 247 DIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYAL-NRLPLEAIRFVIQM 305
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ V +L CA + L G++IHA + + D V N+LIDMYAK G +
Sbjct: 306 QETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCL 365
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A F+ K+ +S+ LI GY++ +++ L+ +M+ G P+ V+F+ ++ AC
Sbjct: 366 HSARNVFN-TSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISAC 424
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
++ +G E+ + + + + ++D + + G+++ A + Q+ K AS
Sbjct: 425 ANLAALKQGKEVHGVALRNH-LYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASW 483
Query: 506 WSAILGACSIYGNTSLGEL-AARNLFDMEPEKSVNYVVLSNI 546
+ ILG YG +GEL A ++F+ + +V Y ++S I
Sbjct: 484 NTMILG----YG--MIGELETAISMFEAMRDDTVQYDLVSYI 519
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 203/375 (54%), Gaps = 7/375 (1%)
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
M+R GV+ + T+ L+ C+ + G + G + K F +++V + LL LY CG+
Sbjct: 1 MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQG-FNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+ DA LF+ + +DVVSWN +IG L++ G + + + F ++R +KP+ ++ S+L
Sbjct: 61 LNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLP 120
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
S + +IH +K+GL+S +L+D Y K GS+++ +Q++ ++ + +S
Sbjct: 121 ISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVS 180
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
++I+G A +A + F+ MI + V + +L + + G++IH F+
Sbjct: 181 WNSIINGLAC-KGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFS 239
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
+ + D + N+LIDMYAKSG +A+ F + +N++SW ++IA YA + EAI
Sbjct: 240 MRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAI 299
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF--SCVV 478
+M+ G PN VTF ++L AC+ G G E+ + RI ++ F + ++
Sbjct: 300 RFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGV---RIGLTSDLFVSNSLI 356
Query: 479 DLFARRGQLESAYNM 493
D++A+ G L SA N+
Sbjct: 357 DMYAKCGCLHSARNV 371
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 89/184 (48%), Gaps = 1/184 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D +++ ++ C + A +Q +H + N S+L +S ++ FY K G + A + F
Sbjct: 413 DVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLF 472
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+++ ++V SW MI GY G E A+ +F AM V+ + +Y + L AC+ ++
Sbjct: 473 NQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVE 532
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGGL 207
G + R + ++DL + G++E+A L +++ D W A++G
Sbjct: 533 RGWQYFSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGAC 592
Query: 208 AMQG 211
+ G
Sbjct: 593 RIYG 596
>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 188/553 (33%), Positives = 298/553 (53%), Gaps = 30/553 (5%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L+P + ++L+ + IHA I G+ESN + T +I Y+ G V AR+
Sbjct: 137 LNPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREV 196
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD + +++VSWT M++ +A+N + AL +FS M G + N FT++S +AC +
Sbjct: 197 FDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAF 256
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ + G K R+ +L+V ALLDLY K G I+DA FE I +KDV+ W+ MI
Sbjct: 257 DVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARY 316
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A + ++ +F M + + P+ FT S+L+A L +QIH +IK+GL S
Sbjct: 317 AQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDV 376
Query: 268 KLTGSLIDVYAKYGSIRSAYQLY-RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
++ +L+DVYAK G + ++ L+ S + D+ +I G + + K A LF +M+
Sbjct: 377 FVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEK-ALRLFLNML 435
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
++ +V L CA++A+L G QIH+ K D V NALIDMYAK G I
Sbjct: 436 EYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIK 495
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
DA FD M ++ +SW ++I+GY+ HG AC+
Sbjct: 496 DARLVFDLMNKQDEVSWNAMISGYSMHG----------------------------LACA 527
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
+ GL +G FT MI + I P EH++C+V L R G L+ A +I ++ +P+ +W
Sbjct: 528 NAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVW 587
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
A+LGAC I+ + LG ++A+++ +MEP+ +V+LSN+Y A WDN RK M+ +
Sbjct: 588 RALLGACVIHNDIELGRISAQHVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRK 647
Query: 567 SLRKNPGYSFLQS 579
++K PG S+++S
Sbjct: 648 GVKKEPGLSWIES 660
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 148/519 (28%), Positives = 248/519 (47%), Gaps = 14/519 (2%)
Query: 5 RANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESN 64
R F K +F + + Y + LQ CI K + +H I+ G +
Sbjct: 13 RRGFSVQSAKLTQEFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLD 72
Query: 65 LHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLR 124
L ++ Y K + A K FD MPERN +S+ +I GYA++ A+ +F + R
Sbjct: 73 LFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHR 132
Query: 125 SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIED 184
G N F +++ L+ M + G I I K N FV +AL+D Y+ CG ++
Sbjct: 133 EGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDV 192
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG 244
A +F+ I KD+VSW M+ A ++ LF M G KP+ FT S+ +A +
Sbjct: 193 AREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACL- 251
Query: 245 GIELMKISQ-IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTA 303
G+E + + +H +K E + +L+D+Y K G I A + + K D+I +
Sbjct: 252 GLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSF 311
Query: 304 LISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY 363
+I+ +A+ D SKEA ++F M + + +L CA + LNLG QIH K
Sbjct: 312 MIARYAQSD-QSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKI 370
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN-VISWTSLIAGYAKHGYGHEAIEL 422
D V NAL+D+YAK G + ++ F E +N V W ++I G+ + G G +A+ L
Sbjct: 371 GLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRL 430
Query: 423 YKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI----NKYRILPRAEHFSCVV 478
+ M + +VT+ S L AC+ G ++ + + +K ++ A ++
Sbjct: 431 FLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNA-----LI 485
Query: 479 DLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
D++A+ G ++ A + MN + S W+A++ S++G
Sbjct: 486 DMYAKCGSIKDARLVFDLMNKQDEVS-WNAMISGYSMHG 523
>gi|125527050|gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indica Group]
Length = 669
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/528 (32%), Positives = 302/528 (57%), Gaps = 3/528 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IHA + G+ S++ + + ++ +Y V A K F+ M ER+VVSWT+MIS AQ G+
Sbjct: 143 IHALVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSMISACAQCGH 202
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ L + S M G+ N+ T S L AC + + + GR + + K ++ +++A
Sbjct: 203 WDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNA 262
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+ +Y KCG + DA F+ + + SWN +I G + ++ +F M+ G+ PD
Sbjct: 263 LISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPD 322
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
TL S+L A EL K +H I G+ N LT SLI++YAK G + +A ++++
Sbjct: 323 GITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQ 382
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
+M K D++S T ++ G+ + + AF+LF++M + ++ ++ L +L+ C+ + +L+
Sbjct: 383 TMTKKDVVSWTVMVCGYVKGHQFTM-AFNLFEEMKIAEVVAHEMALVSLLSACSQLGALD 441
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
GR+IH++ + + D + +AL+DMYAK G I A+ F +M K +SW ++I G A
Sbjct: 442 KGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLA 501
Query: 412 KHGYGHEAIELYKKM-KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
+GYG EA+EL+ +M + + P+ +T ++L AC+H G+ EG F +++ ++P
Sbjct: 502 SNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFY-LMSSLGVVPD 560
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
EH+ C+VDL R G L+ A++ I++M I+P +W ++L AC ++ LG++ +++
Sbjct: 561 TEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHIV 620
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
++ P +V++SN++ WD+ R LM R + K PG+S +Q
Sbjct: 621 NVAPNDVGVHVLVSNLHAEESQWDDVEHVRGLMGSRGIEKTPGHSSVQ 668
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 149/498 (29%), Positives = 257/498 (51%), Gaps = 28/498 (5%)
Query: 45 AERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVG---DVLSARKAFDRMPERNVVSWTA 101
AE L+ AH+ ++ + ++ ++I A D+ ARK FD M + N W
Sbjct: 34 AELHGRLVRAHLTSDSF-----VAGRLIALLASPAARHDMRYARKVFDGMAQPNAFVWNC 88
Query: 102 MISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR---MRWLQGGRMIQGSIQ 158
MI GY+ +AL VF M R GV + +T ++ + A A ++W G I ++
Sbjct: 89 MIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVR 148
Query: 159 KGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFW 218
+ F ++FV S L++ Y +++A +FE + +DVVSW +MI A G D
Sbjct: 149 RIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLK 208
Query: 219 LFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYA 278
+ M +G+ P+ T+ S+L A + + +++ + K G+E+ + +LI +Y
Sbjct: 209 MLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYT 268
Query: 279 KYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILC 338
K G + A + +++M S LI GF ++ H KEA +F++M+L + D + L
Sbjct: 269 KCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEH-KEALRIFEEMLLHGVTPDGITLV 327
Query: 339 LMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK 398
+L+ CA + L G +H++ D + N+LI+MYAK G++A A R F M K
Sbjct: 328 SVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKK 387
Query: 399 NVISWTSLIAGYAKHGYGHE---AIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGW 455
+V+SWT ++ GY K GH+ A L+++MK +V +++ +SLL ACS G +G
Sbjct: 388 DVVSWTVMVCGYVK---GHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGR 444
Query: 456 ELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG--AC 513
E+ + I + + S +VD++A+ G +++A + R+M K T S W+A++G A
Sbjct: 445 EIHS-YIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLS-WNAMIGGLAS 502
Query: 514 SIYGNTSLGELAARNLFD 531
+ YG ++ LFD
Sbjct: 503 NGYGKEAV------ELFD 514
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 206/441 (46%), Gaps = 11/441 (2%)
Query: 2 NIVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
+++ A + G + LK + + + T +SLL C +A + ++ +
Sbjct: 192 SMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKF 251
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G E+++ + +I Y K G + A +AF MP R SW +I G+ QN + AL +F
Sbjct: 252 GIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIF 311
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
ML GV + T S L ACA++ L+ G + I+ + + ++L+++YAKC
Sbjct: 312 EEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKC 371
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G + A +F+ + +KDVVSW M+ G +F LF M + L S+L
Sbjct: 372 GDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLL 431
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
A L K +IH I ++ + L +L+D+YAK G I +A +++R M +
Sbjct: 432 SACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTL 491
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMI-LKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
S A+I G A + + KEA +LF M+ L+ D + L +L CA+V ++ G +
Sbjct: 492 SWNAMIGGLA-SNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFY 550
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHGYGH 417
D ++D+ ++G + +A +M + N + W SL+A H
Sbjct: 551 LMSSLGVVPDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRV----H 606
Query: 418 EAIELYKKMKHE--GMVPNDV 436
++L K + + PNDV
Sbjct: 607 HRMDLGKVIGQHIVNVAPNDV 627
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 140/266 (52%), Gaps = 9/266 (3%)
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGS---IRSAYQLYRSMLKTDIISCTALISG 307
++++H +++ L S + + G LI + A + +R A +++ M + + +I G
Sbjct: 33 LAELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQPNAFVWNCMIRG 92
Query: 308 FARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNL---GRQIHAFAFKYQ 364
++ + ++A +F++M + + D+ + +++ A A L G IHA +
Sbjct: 93 YSSCEA-PRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIG 151
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
+ D V + L++ Y + +A++ F+EM +++V+SWTS+I+ A+ G+ + +++
Sbjct: 152 FTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLS 211
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
+M+ EG++PN VT +SLL AC T EG ++ + + K+ I + + ++ ++ +
Sbjct: 212 EMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVY-NQVGKFGIEADVDIRNALISMYTKC 270
Query: 485 GQLESAYNMIRQMNIKPTASLWSAIL 510
G L A + M + T S W+ ++
Sbjct: 271 GCLSDALEAFQAMPARYTKS-WNTLI 295
>gi|125571373|gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japonica Group]
Length = 669
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/528 (32%), Positives = 302/528 (57%), Gaps = 3/528 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IHA + G+ S++ + + ++ +Y V A K F+ M ER+VVSWT+MIS AQ G+
Sbjct: 143 IHALVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSMISACAQCGH 202
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ L + S M G+ N+ T S L AC + + + GR + + K ++ +++A
Sbjct: 203 WDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNA 262
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+ +Y KCG + DA F+ + + SWN +I G + ++ +F M+ G+ PD
Sbjct: 263 LISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPD 322
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
TL S+L A EL K +H I G+ N LT SLI++YAK G + +A ++++
Sbjct: 323 GITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQ 382
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
+M K D++S T ++ G+ + + AF+LF++M + ++ ++ L +L+ C+ + +L+
Sbjct: 383 TMTKKDVVSWTVMVCGYVKGHQFTM-AFNLFEEMKIAEVVAHEMALVSLLSACSQLGALD 441
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
GR+IH++ + + D + +AL+DMYAK G I A+ F +M K +SW ++I G A
Sbjct: 442 KGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLA 501
Query: 412 KHGYGHEAIELYKKM-KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
+GYG EA+EL+ +M + + P+ +T ++L AC+H G+ EG F +++ ++P
Sbjct: 502 SNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFY-LMSSLGVVPD 560
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
EH+ C+VDL R G L+ A++ I++M I+P +W ++L AC ++ LG++ +++
Sbjct: 561 TEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHIV 620
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
++ P +V++SN++ WD+ R LM R + K PG+S +Q
Sbjct: 621 NVAPNDVGVHVLVSNLHAEESQWDDVEHVRGLMGSRGIEKTPGHSSVQ 668
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 150/498 (30%), Positives = 257/498 (51%), Gaps = 28/498 (5%)
Query: 45 AERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVG---DVLSARKAFDRMPERNVVSWTA 101
AE L+ AH+ ++ + ++ ++I A D+ ARK FD M + N W
Sbjct: 34 AELHGRLVRAHLTSDSF-----VAGRLIALLASPAARHDMRYARKVFDGMAQPNAFVWNC 88
Query: 102 MISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR---MRWLQGGRMIQGSIQ 158
MI GY+ +AL VF M R GV + +T ++ + A A ++W G I ++
Sbjct: 89 MIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVR 148
Query: 159 KGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFW 218
+ F ++FV S L++ Y +E+A +FE + +DVVSW +MI A G D
Sbjct: 149 RIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLK 208
Query: 219 LFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYA 278
+ M +G+ P+ T+ S+L A + + +++ + K G+E+ + +LI +Y
Sbjct: 209 MLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYT 268
Query: 279 KYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILC 338
K G + A + +++M S LI GF ++ H KEA +F++M+L + D + L
Sbjct: 269 KCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEH-KEALRIFEEMLLHGVTPDGITLV 327
Query: 339 LMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK 398
+L+ CA + L G +H++ D + N+LI+MYAK G++A A R F M K
Sbjct: 328 SVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKK 387
Query: 399 NVISWTSLIAGYAKHGYGHE---AIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGW 455
+V+SWT ++ GY K GH+ A L+++MK +V +++ +SLL ACS G +G
Sbjct: 388 DVVSWTVMVCGYVK---GHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGR 444
Query: 456 ELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG--AC 513
E+ + I + + S +VD++A+ G +++A + R+M K T S W+A++G A
Sbjct: 445 EIHS-YIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLS-WNAMIGGLAS 502
Query: 514 SIYGNTSLGELAARNLFD 531
+ YG ++ LFD
Sbjct: 503 NGYGKEAV------ELFD 514
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 206/441 (46%), Gaps = 11/441 (2%)
Query: 2 NIVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
+++ A + G + LK + + + T +SLL C +A + ++ +
Sbjct: 192 SMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKF 251
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G E+++ + +I Y K G + A +AF MP R SW +I G+ QN + AL +F
Sbjct: 252 GIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIF 311
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
ML GV + T S L ACA++ L+ G + I+ + + ++L+++YAKC
Sbjct: 312 EEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKC 371
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G + A +F+ + +KDVVSW M+ G +F LF M + L S+L
Sbjct: 372 GDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLL 431
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
A L K +IH I ++ + L +L+D+YAK G I +A +++R M +
Sbjct: 432 SACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTL 491
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMI-LKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
S A+I G A + + KEA +LF M+ L+ D + L +L CA+V ++ G +
Sbjct: 492 SWNAMIGGLA-SNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFY 550
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHGYGH 417
D ++D+ ++G + +A +M + N + W SL+A H
Sbjct: 551 LMSSLGVVPDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRV----H 606
Query: 418 EAIELYKKMKHE--GMVPNDV 436
++L K + + PNDV
Sbjct: 607 HRMDLGKVIGQHIVNVAPNDV 627
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 140/266 (52%), Gaps = 9/266 (3%)
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGS---IRSAYQLYRSMLKTDIISCTALISG 307
++++H +++ L S + + G LI + A + +R A +++ M + + +I G
Sbjct: 33 LAELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQPNAFVWNCMIRG 92
Query: 308 FARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNL---GRQIHAFAFKYQ 364
++ + ++A +F++M + + D+ + +++ A A L G IHA +
Sbjct: 93 YSSCEA-PRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIG 151
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
+ D V + L++ Y + +A++ F+EM +++V+SWTS+I+ A+ G+ + +++
Sbjct: 152 FTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLS 211
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
+M+ EG++PN VT +SLL AC T EG ++ + + K+ I + + ++ ++ +
Sbjct: 212 EMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVY-NQVGKFGIEADVDIRNALISMYTKC 270
Query: 485 GQLESAYNMIRQMNIKPTASLWSAIL 510
G L A + M + T S W+ ++
Sbjct: 271 GCLSDALEAFQAMPARYTKS-WNTLI 295
>gi|326495056|dbj|BAJ85624.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 183/553 (33%), Positives = 293/553 (52%), Gaps = 2/553 (0%)
Query: 23 CPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVL 82
CP+ D L+ + R +H + + G ++ ++ YAK GD+
Sbjct: 116 CPEAHDDVVLLSLALKASVRSADFRYGRRLHCNAVKAGGADGFVMNC-LVDMYAKAGDLE 174
Query: 83 SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA 142
+ARK FDR+ RNVVSWT+M+SG QNG+ E L +F+ M V +++T +S L AC
Sbjct: 175 NARKVFDRILGRNVVSWTSMLSGCLQNGFAEEGLALFNEMREERVLPSEYTMASVLMACT 234
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
+ L GR + GS+ K V N F+ +A+LD+Y KCG +EDA LF+ + D+V W
Sbjct: 235 MLGSLHQGRWVHGSVIKHGMVFNPFITAAVLDMYVKCGEVEDARRLFDELGFVDLVLWTT 294
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
MI G G D+ LF + P+ T+ ++L AS L IH + +KL
Sbjct: 295 MIVGYTQNGSPLDALLLFSDKKFVHIVPNSVTIATVLSASAQLRNLSLGRLIHAMSVKLL 354
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
+ ++ + +L+D+YAK ++ A ++ + D+++ +LI+G+ +D EA LF
Sbjct: 355 VIENDVVMNALVDMYAKCKALSEANGIFGRISNKDVVTWNSLIAGYVEND-MGNEALMLF 413
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
M ++ D + + L+ C + L +G+ H +A K + V AL+++Y K
Sbjct: 414 SQMRVQGSSPDAISIVNALSACVCLGDLLIGKCFHTYAVKRAFLSNVYVNTALLNLYNKC 473
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
++ A R F EM ++N ++W ++I GY G +I+L KM + + PN+V F S+L
Sbjct: 474 ADLPSAQRVFSEMSERNSVTWGAMIGGYGMQGDSAGSIDLLNKMLKDNIQPNEVVFTSIL 533
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
CSHTG+ G F M + I P +H++C+VD+ AR G LE A I++M +
Sbjct: 534 STCSHTGMVSVGKMCFDSMAQYFNITPSMKHYACMVDVLARAGNLEEALEFIQKMPMPAD 593
Query: 503 ASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKL 562
S+W A L C ++ GE A + + P+K YV++SN+YT+ G WD + R+L
Sbjct: 594 ISIWGAFLHGCKLHSRLEFGEEAINRMMVLHPDKPDFYVLMSNLYTSYGRWDKSLAIRRL 653
Query: 563 MEERSLRKNPGYS 575
M+ER L K PG S
Sbjct: 654 MQERGLVKLPGCS 666
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 147/543 (27%), Positives = 271/543 (49%), Gaps = 41/543 (7%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HA ++ +G L TK++ YA +GD+ SAR+ D P + ++ + +A G
Sbjct: 42 LHARLLAHGLLRALRARTKLLSCYAALGDLASARRVLDETPRPDPYTYRVALGWHAAAGR 101
Query: 112 DENALLVFSAMLRSGVRANQ--FTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK 169
+AL + M R A+ S AL+A R + GR + + K + FV
Sbjct: 102 HADALALHRGMRRRCPEAHDDVVLLSLALKASVRSADFRYGRRLHCNAVKAGGADG-FVM 160
Query: 170 SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
+ L+D+YAK G +E+A +F+RI ++VVSW +M+ G GF ++ LF M + +
Sbjct: 161 NCLVDMYAKAGDLENARKVFDRILGRNVVSWTSMLSGCLQNGFAEEGLALFNEMREERVL 220
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
P +T+ S+L A L + +H +IK G+ + +T +++D+Y K G + A +L
Sbjct: 221 PSEYTMASVLMACTMLGSLHQGRWVHGSVIKHGMVFNPFITAAVLDMYVKCGEVEDARRL 280
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ + D++ T +I G+ ++ + +A LF D + + V + +L+ A + +
Sbjct: 281 FDELGFVDLVLWTTMIVGYTQNGS-PLDALLLFSDKKFVHIVPNSVTIATVLSASAQLRN 339
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
L+LGR IHA + K + V NAL+DMYAK +++AN F + +K+V++W SLIAG
Sbjct: 340 LSLGRLIHAMSVKLLVIENDVVMNALVDMYAKCKALSEANGIFGRISNKDVVTWNSLIAG 399
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFT---------- 459
Y ++ G+EA+ L+ +M+ +G P+ ++ ++ L AC G G T
Sbjct: 400 YVENDMGNEALMLFSQMRVQGSSPDAISIVNALSACVCLGDLLIGKCFHTYAVKRAFLSN 459
Query: 460 --------DMINKYRILPRAEH------------FSCVVDLFARRGQLESAYNMIRQM-- 497
++ NK LP A+ + ++ + +G + +++ +M
Sbjct: 460 VYVNTALLNLYNKCADLPSAQRVFSEMSERNSVTWGAMIGGYGMQGDSAGSIDLLNKMLK 519
Query: 498 -NIKPTASLWSAILGACSIYGNTSLGELAARNL---FDMEPEKSVNYVVLSNIYTAAGAW 553
NI+P ++++IL CS G S+G++ ++ F++ P +Y + ++ AG
Sbjct: 520 DNIQPNEVVFTSILSTCSHTGMVSVGKMCFDSMAQYFNITPSMK-HYACMVDVLARAGNL 578
Query: 554 DNA 556
+ A
Sbjct: 579 EEA 581
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 180/499 (36%), Positives = 284/499 (56%), Gaps = 1/499 (0%)
Query: 80 DVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALR 139
D R F ++ + N+ W MI G N ++A+ + M G N FT+ L+
Sbjct: 61 DTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLK 120
Query: 140 ACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS 199
ACAR+ LQ G I + KG F ++FVK++L+ LYAKCG++EDA +F+ I K+VVS
Sbjct: 121 ACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVS 180
Query: 200 WNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLII 259
W A+I G G ++ +FR ++ + PD FT+ +L A +L IH I+
Sbjct: 181 WTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIM 240
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
++G+ + + SL+D+YAK G++ A ++ M + DI+S A+I G+A + KEA
Sbjct: 241 EMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALN-GLPKEAI 299
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMY 379
DLF M + + D + +L+ CA + +L LG + + + Y+ +G ALID+Y
Sbjct: 300 DLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLY 359
Query: 380 AKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFL 439
AK G ++ A F M +K+ + W ++I+G A +GY + L+ +++ G+ P+ TF+
Sbjct: 360 AKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFI 419
Query: 440 SLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
LL C+H GL EG F M + + P EH+ C+VDL R G L+ A+ +IR M +
Sbjct: 420 GLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPM 479
Query: 500 KPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKT 559
+ A +W A+LGAC I+ +T L ELA + L ++EP S NYV+LSNIY+A WD A K
Sbjct: 480 EANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKV 539
Query: 560 RKLMEERSLRKNPGYSFLQ 578
R M E+ ++K PG S+++
Sbjct: 540 RLSMNEKRIQKPPGCSWIE 558
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 155/294 (52%), Gaps = 3/294 (1%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPSTY--MSLLQFCIDKKAERQAHLIHAHIITNG 60
I+ G+ ++A+ + L P ++ + +L C IH I+ G
Sbjct: 184 IISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMG 243
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
N+ + T ++ YAK G++ AR FD MPE+++VSW AMI GYA NG + A+ +F
Sbjct: 244 MVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFL 303
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M R V+ + +T L ACAR+ L+ G + G + + F+ N + +AL+DLYAKCG
Sbjct: 304 QMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCG 363
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFT-LGSIL 239
+ AW +F+ ++ KD V WNA+I GLAM G+ SF LF + + G+KPD T +G +
Sbjct: 364 SMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLC 423
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ G+ + + L S + G ++D+ + G + A+QL R+M
Sbjct: 424 GCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNM 477
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 190/576 (32%), Positives = 298/576 (51%), Gaps = 39/576 (6%)
Query: 9 KTGQLKQAL----KFSLSC--PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYE 62
+ G + +AL K +L C PD + T SLL C A H++ I G
Sbjct: 329 QQGYINRALALFKKMNLDCQKPDCV----TVASLLSACASVGALPNGKQFHSYAIKAGMT 384
Query: 63 SNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAM 122
S++ + ++ Y K D+ +A + F Y Q + +F+ M
Sbjct: 385 SDIVVEGSLLDLYVKCSDIKTAHEFF---------------LCYGQLDNLNKSFQIFTQM 429
Query: 123 LRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWI 182
G+ NQFTY S L+ C + G I + K F N++V S L+D+YAK G +
Sbjct: 430 QIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKL 489
Query: 183 EDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS 242
+ A +F R++ DVVSW AMI G ++ LF+ M QG+K D S + A
Sbjct: 490 DHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISAC 549
Query: 243 VGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCT 302
G L + QIH G + +L+ +YA+ G +R AY + + D +S
Sbjct: 550 AGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWN 609
Query: 303 ALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK 362
+L+SGFA+ + +EA ++F M + I+ ++ AN+A++ +G+QIH K
Sbjct: 610 SLVSGFAQS-GYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRK 668
Query: 363 YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIEL 422
+ V NALI +YAK G I D ISW S+I GY++HG G EA++L
Sbjct: 669 TGYDSETEVSNALITLYAKCGTIDD-------------ISWNSMITGYSQHGCGFEALKL 715
Query: 423 YKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFA 482
++ MK ++PN VTF+ +L ACSH GL EG F M + ++P+ EH++CVVDL
Sbjct: 716 FEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLG 775
Query: 483 RRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVV 542
R G L A + +M I+P A +W +L AC+++ N +GE AA +L ++EP+ S YV+
Sbjct: 776 RSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVL 835
Query: 543 LSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+SN+Y +G WD +TR++M++R ++K PG S+++
Sbjct: 836 VSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVE 871
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 156/521 (29%), Positives = 265/521 (50%), Gaps = 44/521 (8%)
Query: 47 RQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGY 106
R IHA IT+G+ES+ + +I Y K G + SA+K F+ + R+ VSW AMISG
Sbjct: 181 RFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGL 240
Query: 107 AQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENL 166
+QNGY+E A+L+F ++ L AC ++ + + G+ + G + K F
Sbjct: 241 SQNGYEEEAMLLFCQIV--------------LSACTKVEFFEFGKQLHGLVLKQGFSSET 286
Query: 167 FVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ 226
+V +AL+ LY++ G + A +F + ++D VS+N++I GLA QG+ + + LF+ M
Sbjct: 287 YVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLD 346
Query: 227 GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSA 286
KPDC T+ S+L A L Q H IK G+ S + GSL+D+Y K I++A
Sbjct: 347 CQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTA 406
Query: 287 YQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICAN 346
++ + + + DN +K +F +F M ++ + + +L C
Sbjct: 407 HEFFLC---------------YGQLDNLNK-SFQIFTQMQIEGIVPNQFTYPSILKTCTT 450
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
+ + +LG QIH K ++ V + LIDMYAK G++ A + F + + +V+SWT++
Sbjct: 451 LGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAM 510
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTD-MINKY 465
IAGY +H EA+ L+K+M+ +G+ +++ F S + AC+ +G ++ ++ Y
Sbjct: 511 IAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGY 570
Query: 466 RILPRAEHFS---CVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG-ACSIYGNTSL 521
++ S +V L+AR G++ AY Q+ K S S + G A S Y +L
Sbjct: 571 -----SDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEAL 625
Query: 522 GELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKL 562
A N +E +N + +AA N R +++
Sbjct: 626 NIFAQMNKAGLE----INSFTFGSAVSAAANIANVRIGKQI 662
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 137/504 (27%), Positives = 242/504 (48%), Gaps = 60/504 (11%)
Query: 70 KVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA 129
K+I FY GD+ A FD MP R++ W + + + +F ML V
Sbjct: 102 KLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEF 161
Query: 130 NQFTYSSALRACA----RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
++ ++ LR C+ R+++ I F + F+ + L+DLY K G++ A
Sbjct: 162 DERIFAVVLRGCSGNAVSFRFVE---QIHAKTITSGFESSTFICNPLIDLYFKNGFLSSA 218
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLF-RSMMRQGMKPDCFTLGSILRASVG 244
+FE ++ +D VSW AMI GL+ G+ +++ LF + ++ K + F G
Sbjct: 219 KKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIVLSACTKVEFFEFG-------- 270
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
Q+H L++K G S + +L+ +Y++ G++ SA Q++ M + D +S +L
Sbjct: 271 -------KQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSL 323
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
ISG A+ + A LFK M L D V + +L+ CA+V +L G+Q H++A K
Sbjct: 324 ISGLAQ-QGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAG 382
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
+ D V +L+D+Y K +I A+ F G + ++ ++ +++
Sbjct: 383 MTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLN---------------KSFQIFT 427
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF-----SCVVD 479
+M+ EG+VPN T+ S+L C+ G T G ++ T ++L F S ++D
Sbjct: 428 QMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHT------QVLKTGFQFNVYVSSVLID 481
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF-DMEPE--K 536
++A+ G+L+ A + R++ S W+A++ + + + A NLF +M+ + K
Sbjct: 482 MYAKHGKLDHALKIFRRLKENDVVS-WTAMIAGYTQHDKFT----EALNLFKEMQDQGIK 536
Query: 537 SVNYVVLSNIYTAAG--AWDNARK 558
S N S I AG A D R+
Sbjct: 537 SDNIGFASAISACAGIQALDQGRQ 560
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 131/503 (26%), Positives = 225/503 (44%), Gaps = 71/503 (14%)
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENA--LLVFSAMLRSGVRANQFTYSSALRACARMRW 146
D +PE+ +N D NA + M + GVRAN T+ W
Sbjct: 50 DEIPEK-------------ENEMDGNASGIGYLHLMEQHGVRANSQTF----------LW 86
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
L ++G + F + L L+D Y G + A +F+ + + + WN +
Sbjct: 87 L-----LEGCLNSRSFYDGL----KLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNT 137
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG-GIELMKISQIHDLIIKLGLES 265
+ LFR M+ + ++ D +LR G + + QIH I G ES
Sbjct: 138 FIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFES 197
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
S + LID+Y K G + SA +++ ++ D +S A+ISG ++ + + +EA LF +
Sbjct: 198 STFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQ-NGYEEEAMLLFCQI 256
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ L+ C V G+Q+H K S + V NAL+ +Y++SG +
Sbjct: 257 V--------------LSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNL 302
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
+ A + F M ++ +S+ SLI+G A+ GY + A+ L+KKM + P+ VT SLL AC
Sbjct: 303 SSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSAC 362
Query: 446 SHTGLTCEGWE---------LFTDMINKYRILP---RAEHFSCVVDLFARRGQLES---A 490
+ G G + + +D++ + +L + + F GQL++ +
Sbjct: 363 ASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKS 422
Query: 491 YNMIRQMNIK---PTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYV--VLSN 545
+ + QM I+ P + +IL C+ G T LGE + + +V YV VL +
Sbjct: 423 FQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNV-YVSSVLID 481
Query: 546 IYTAAGAWDNARKTRKLMEERSL 568
+Y G D+A K + ++E +
Sbjct: 482 MYAKHGKLDHALKIFRRLKENDV 504
>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 768
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 177/530 (33%), Positives = 298/530 (56%), Gaps = 4/530 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HA I + +L + ++ Y+K G V F+R+ ++++ SW ++I+G AQ G
Sbjct: 168 VHAQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGR 227
Query: 112 DENALLVFSAMLRSGVR-ANQFTYSSALRACAR-MRWLQGGRMIQGSIQKGRFVENLFVK 169
+ +AL +F M+ G+ N+F + S RAC+ + L+ G I G K + N +
Sbjct: 228 EMDALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLDRNSYAG 287
Query: 170 SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
+L D+YA+C ++ A +F RIE D+VSWN++I + G ++ LF M +K
Sbjct: 288 CSLGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLK 347
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
PD T+ ++L A VG L + IH ++KLGL + SLI +Y + SA +
Sbjct: 348 PDGITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDV 407
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ D+++ ++++ + H ++ F LF+ + +D + L +L+ A +
Sbjct: 408 FHETNDRDVVTWNSILTACVQH-RHMEDVFKLFRLLHSSMPSLDRISLNNVLSASAELGY 466
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD-KNVISWTSLIA 408
+ +Q+HA+AFK DA + NALID YAK G + DAN+ F+ MG ++V SW+SLI
Sbjct: 467 FEMAKQVHAYAFKVGLVSDAILSNALIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIV 526
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
GYA+ GY EA++L+ +M++ G+ PN VTF+ +L ACS GL EG ++ M +Y I+
Sbjct: 527 GYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLIACSRVGLVDEGCYYYSIMEPEYGIV 586
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARN 528
P EH SCV+DL AR G+L A + QM +P +W+ +L A + + +G+ AA
Sbjct: 587 PTKEHCSCVIDLLARAGRLSEAAKFVDQMPFEPDIIMWNTLLAASRTHNDVEMGKRAAEG 646
Query: 529 LFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+ +++P S YV+L NIY ++G W+ + +K M ++K+PG S+++
Sbjct: 647 VLNIDPSHSAAYVLLCNIYASSGNWNEFARLKKDMRSSGVQKSPGKSWIK 696
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 156/523 (29%), Positives = 263/523 (50%), Gaps = 15/523 (2%)
Query: 8 FKTGQLKQALK------FSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGY 61
+ +G+L AL+ FS + L + Y +L+ C ++ Q L+H H++ +
Sbjct: 12 YHSGRLSAALRAFESLPFSPASAPDPLSAAAYAALVAACSRLRSFPQGRLVHRHLLASSA 71
Query: 62 ES-----NLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENAL 116
+ N LS +I Y + SAR FD M +RN VSW A+I+ +AQN +A+
Sbjct: 72 GAAYLARNTILSNHLITMYGRCAAPDSARMVFDGMLDRNPVSWAAVIAAHAQNSRCADAM 131
Query: 117 LVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLY 176
+FS+MLR G ++F SA+RACA + L GR + K +L V++AL+ +Y
Sbjct: 132 GLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVHAQAIKSDNGGHLIVQNALVTMY 191
Query: 177 AKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGM-KPDCFTL 235
+K G + D + LFERI KD+ SW ++I GLA QG D+ +FR M+ +GM P+ F
Sbjct: 192 SKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGREMDALHIFREMIAEGMHHPNEFHF 251
Query: 236 GSILRASVGGIELMKI-SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML 294
GS+ RA I ++ QIH L +K L+ ++ SL D+YA+ + SA +++ +
Sbjct: 252 GSVFRACSVVINSLEYGEQIHGLCVKYKLDRNSYAGCSLGDMYARCNKLDSAMKVFYRIE 311
Query: 295 KTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGR 354
D++S +LI+ F+ D S EA LF +M + D + + +L C +L GR
Sbjct: 312 SPDLVSWNSLINAFSADGLLS-EAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGR 370
Query: 355 QIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG 414
IH++ K D V N+LI MY + + A F E D++V++W S++ +H
Sbjct: 371 SIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHR 430
Query: 415 YGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF 474
+ + +L+ ++ H M D L+ + + S E + K ++ A
Sbjct: 431 HMEDVFKLF-RLLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILS 489
Query: 475 SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
+ ++D +A+ G L+ A + M WS+++ + +G
Sbjct: 490 NALIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFG 532
>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 179/531 (33%), Positives = 290/531 (54%), Gaps = 1/531 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IH + + E++ + +I Y K + +ARK FD M RN+VSWT MISGY QN +
Sbjct: 243 IHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSF 302
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ A+ +F M ++G + + F +S L +C + + GR I + K + +VK+A
Sbjct: 303 NAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNA 362
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+D+YAKC + +A +F+ + D +S+NAMI G + ++ +F+ M ++P
Sbjct: 363 LIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPS 422
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
T S+L S + + QIH LIIK G +LIDVY+K + A ++
Sbjct: 423 LLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFN 482
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
+ D++ ++I G A+++ +EA LF ++L M ++ ++ + + +AS+
Sbjct: 483 MLHYKDMVIWNSMIFGHAQNE-QGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMF 541
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
G+Q HA+ K D V NALIDMYAK G I + F+ ++VI W S+I YA
Sbjct: 542 HGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITTYA 601
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
+HG+ EA+++++ M + PN VTF+ +L AC+H G EG F M + Y I P
Sbjct: 602 QHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLNHFNSMKSNYDIEPGI 661
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
EH++ VV+LF R G+L +A I +M IKP A++W ++L AC ++GN +G AA
Sbjct: 662 EHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSACHLFGNAEIGRYAAEMALL 721
Query: 532 MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+P S YV+LSNIY + G W + R+ M+ K G S+++ +K+
Sbjct: 722 ADPTDSGPYVLLSNIYASKGLWADVHNLRQQMDSSGTVKETGCSWIEVTKE 772
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 153/534 (28%), Positives = 273/534 (51%), Gaps = 13/534 (2%)
Query: 18 KFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAK 77
K S P+ L S+L+ C KA +H + ++N+++ T +I YAK
Sbjct: 112 KASCEVPNEFL----LASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAK 167
Query: 78 VGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSA 137
+G + A F +P R V+W +I+GYAQ G AL +F M GVR ++F +SA
Sbjct: 168 LGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASA 227
Query: 138 LRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDV 197
+ AC+ + +L+GGR I G + + V + L+DLY KC + A LF+ +E +++
Sbjct: 228 VSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNL 287
Query: 198 VSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDL 257
VSW MI G FN ++ +F +M + G +PD F SIL + + + QIH
Sbjct: 288 VSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAH 347
Query: 258 IIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKE 317
+IK LE+ + +LID+YAK + A ++ ++ + D IS A+I G++++ + + E
Sbjct: 348 VIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLA-E 406
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
A ++F+ M + + +L + ++ ++ L +QIH K +S D +ALID
Sbjct: 407 AVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALID 466
Query: 378 MYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVT 437
+Y+K + DA F+ + K+++ W S+I G+A++ G EAI+L+ ++ GM PN+ T
Sbjct: 467 VYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFT 526
Query: 438 FLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
F++L+ S G + F I K + + ++D++A+ G ++ M+ +
Sbjct: 527 FVALVTVASTLASMFHGQQ-FHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEG-RMLFES 584
Query: 498 NIKPTASLWSAILGACSIYGNTSLGELAARNLFDM--EPEKSVNYVVLSNIYTA 549
W++++ + +G+ A +F + E E NYV + +A
Sbjct: 585 TCGEDVICWNSMITTYAQHGHAE----EALQVFRLMGEAEVEPNYVTFVGVLSA 634
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 137/421 (32%), Positives = 227/421 (53%), Gaps = 9/421 (2%)
Query: 30 PSTYMS----LLQFCIDKKAERQAHL---IHAHIITNGYESNLHLSTKVIIFYAKVGDVL 82
PST++ +L C+ +R L IHA G +L L+ ++ Y+ +G +
Sbjct: 11 PSTHIRSLARVLLSCLPTGGDRLRRLNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLR 70
Query: 83 SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA-NQFTYSSALRAC 141
AR FDRMP RN+VSW ++IS Y Q+G D+ A+ +F A ++ N+F +S LRAC
Sbjct: 71 DARHLFDRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRAC 130
Query: 142 ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN 201
+ + + G + G K N++V +AL++LYAK G +++A ++F + + V+WN
Sbjct: 131 TQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWN 190
Query: 202 AMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKL 261
+I G A G + LF M +G++PD F L S + A L QIH +
Sbjct: 191 TVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRS 250
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDL 321
E+ + LID+Y K + +A +L+ M +++S T +ISG+ + ++ + EA +
Sbjct: 251 ATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQ-NSFNAEAITM 309
Query: 322 FKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
F +M D +LN C ++A++ GRQIHA K D V NALIDMYAK
Sbjct: 310 FWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAK 369
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
+ +A FD + + + IS+ ++I GY+K+ EA+ ++++M+ + P+ +TF+SL
Sbjct: 370 CEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSL 429
Query: 442 L 442
L
Sbjct: 430 L 430
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 140/269 (52%), Gaps = 3/269 (1%)
Query: 28 LDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
L PS T++SLL + A + IH II +G +L+ ++ +I Y+K V A+
Sbjct: 419 LRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAK 478
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
F+ + +++V W +MI G+AQN E A+ +F+ +L SG+ N+FT+ + + + +
Sbjct: 479 TVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLA 538
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
+ G+ I K + V +AL+D+YAKCG+I++ +LFE +DV+ WN+MI
Sbjct: 539 SMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMIT 598
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV-GGIELMKISQIHDLIIKLGLE 264
A G +++ +FR M ++P+ T +L A G ++ + + +E
Sbjct: 599 TYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLNHFNSMKSNYDIE 658
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ S+++++ + G + +A + M
Sbjct: 659 PGIEHYASVVNLFGRSGKLHAAKEFIERM 687
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 115/247 (46%), Gaps = 9/247 (3%)
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGF---ARDDNHSKEAFDLFKDM 325
LT L+ Y+ G +R A L+ M +++S ++IS + RDD A LF
Sbjct: 55 LTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGRDDC----AISLFVAF 110
Query: 326 ILKKMGI-DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
+ ++ +L +L C +++LG Q+H A K + VG ALI++YAK G
Sbjct: 111 QKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGC 170
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ +A F + + ++W ++I GYA+ G G A+EL+ +M EG+ P+ S + A
Sbjct: 171 MDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSA 230
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
CS G EG + + ++DL+ + +L +A + M + S
Sbjct: 231 CSALGFL-EGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVS 289
Query: 505 LWSAILG 511
+ I G
Sbjct: 290 WTTMISG 296
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 175/524 (33%), Positives = 292/524 (55%), Gaps = 11/524 (2%)
Query: 58 TNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALL 117
T + +++ + +I +A+ GD+++A++ FD + ER V WT +I+ Y Q G +
Sbjct: 173 TGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVE 232
Query: 118 VFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYA 177
+F ML G + ++ SS + AC + ++ G+ + + V + V L+D+YA
Sbjct: 233 LFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYA 292
Query: 178 KCGW---IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFW-LFRSMMRQGMKPDCF 233
K +E A +F+ + R +V+SW A+I G G +++ LFR M+ + ++P+
Sbjct: 293 KLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHI 352
Query: 234 TLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
T ++L+A + QIH ++K + N + +L+ +YA+ G + A + + +
Sbjct: 353 TYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQL 412
Query: 294 LKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG 353
+T+I+S + + R++ + D G+ +L+ A+V L G
Sbjct: 413 YETNILSMSPDVET-ERNNASCSSKIEGMDD------GVSTFTFASLLSAAASVGLLTKG 465
Query: 354 RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKH 413
+++HA + K D + N+L+ MYA+ G + DA RAFDEM D NVISWTS+I+G AKH
Sbjct: 466 QKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKH 525
Query: 414 GYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEH 473
GY +A+ ++ M G+ PNDVT++++L ACSH GL EG E F M + +LPR EH
Sbjct: 526 GYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEH 585
Query: 474 FSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDME 533
++C+VDL AR G +E A I +M K A +W +L AC YGNT +GE+AA ++ ++E
Sbjct: 586 YACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRTYGNTEIGEIAANHVINLE 645
Query: 534 PEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
P YV+LSN+Y AG WD + R LM +++L K G S++
Sbjct: 646 PRDPAPYVLLSNLYADAGLWDEVARIRSLMRDKNLSKETGLSWM 689
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 137/460 (29%), Positives = 244/460 (53%), Gaps = 20/460 (4%)
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRM-PERNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
++ ++ Y+K G V +AR+ FD+M R++VSWTAM S A+NG + +L + ML
Sbjct: 78 VANSLLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAMASCLARNGAERESLRLLGEMLEL 137
Query: 126 GVRANQFTYSSALRAC--ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIE 183
G+R N FT +A RAC + L GG ++ ++ G + ++ V AL+D++A+ G +
Sbjct: 138 GLRPNAFTLCAAARACFPQELFRLAGGVVLGFVLKTGFWGTDVSVGCALIDMFARNGDLV 197
Query: 184 DAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-- 241
A +F+ + + V W +I G LF M+ G +PD +++ S++ A
Sbjct: 198 AAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACT 257
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRS---AYQLYRSMLKTDI 298
+G + L + Q+H + ++LGL S + ++ L+D+YAK RS A +++++M + ++
Sbjct: 258 ELGSVRLGQ--QLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNV 315
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
+S TALISG+ + LF++M+ + + + + +L CAN++ + GRQIHA
Sbjct: 316 MSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHA 375
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHE 418
K ++ VGNAL+ MYA+SG + +A +AFD++ + N++S + + +
Sbjct: 376 HVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDVETERNNASCSS 435
Query: 419 AIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFT-DMINKYRILPRAEHFSCV 477
IE +G+ + TF SLL A + GL +G +L M +R + +
Sbjct: 436 KIEGMD----DGV--STFTFASLLSAAASVGLLTKGQKLHALSMKAGFR--SDQGISNSL 487
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
V ++AR G LE A +M S W++I+ + +G
Sbjct: 488 VSMYARCGYLEDACRAFDEMKDHNVIS-WTSIISGLAKHG 526
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 210/415 (50%), Gaps = 17/415 (4%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ G + ++ L D +P Y S++ C + + R +H+ + G S+
Sbjct: 223 QAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSC 282
Query: 67 LSTKVIIFYAKVG---DVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALL-VFSAM 122
+S ++ YAK+ + ARK F MP NV+SWTA+ISGY Q+G EN ++ +F M
Sbjct: 283 VSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREM 342
Query: 123 LRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWI 182
L +R N TYS+ L+ACA + GR I + K V +AL+ +YA+ G +
Sbjct: 343 LNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCM 402
Query: 183 EDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS 242
E+A F+++ +++S + + N+ S M G+ FT S+L A+
Sbjct: 403 EEARKAFDQLYETNILSMSPDVE----TERNNASCSSKIEGMDDGVST--FTFASLLSAA 456
Query: 243 VGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCT 302
L K ++H L +K G S ++ SL+ +YA+ G + A + + M ++IS T
Sbjct: 457 ASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWT 516
Query: 303 ALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK 362
++ISG A+ ++K+A +F DMIL + +DV +L+ C++V + G++ H + +
Sbjct: 517 SIISGLAK-HGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKE-HFRSMQ 574
Query: 363 YQSSYDAAVGN--ALIDMYAKSGEIADANRAFDEMGDK-NVISWTSLIAGYAKHG 414
+ + ++D+ A+SG + +A + +EM K + + W +L++ +G
Sbjct: 575 KDHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRTYG 629
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 4/174 (2%)
Query: 340 MLNICANVASLNLGRQIHAFAFKYQS-SYDAAVGNALIDMYAKSGEIADANRAFDEM-GD 397
+L A L LGR +H + + DA V N+L+ MY+K G + A R FD+M G
Sbjct: 46 LLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGV 105
Query: 398 KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWEL 457
++++SWT++ + A++G E++ L +M G+ PN T + AC L +
Sbjct: 106 RDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGGV 165
Query: 458 FTDMINKYRILPRAEHFSC-VVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
+ K C ++D+FAR G L +A + + I+ T+ +W+ ++
Sbjct: 166 VLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGL-IERTSVVWTLLI 218
>gi|225438217|ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Vitis vinifera]
Length = 729
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 184/558 (32%), Positives = 308/558 (55%), Gaps = 19/558 (3%)
Query: 29 DPSTYMSLLQFC----IDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
D T+ S+L C +D E +H +I G+ + ++ Y G V A
Sbjct: 184 DKYTFASVLSLCSLELLDFGRE-----VHTLVIKTGFLVRASVINALLTMYFNSGKVADA 238
Query: 85 RKAFDRMPE--RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA 142
+ F+ + +++ MI G A G DE AL++F M + +R + T+ S + +C+
Sbjct: 239 YEVFEEAESTVHDDITFNVMIGGLASVGRDEEALIMFKEMQEACLRPTELTFVSVMSSCS 298
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
R + K F V +A + +Y+ CG + ++F+R+E KD++SWN
Sbjct: 299 SARV---SHQVHAQAIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVFDRLEEKDLISWNI 355
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
+I A F + F M R G++PD FT+GS+L AS +E++K+ Q L+ K G
Sbjct: 356 IIMNYAQGNFYRLAILAFLQMQRAGIEPDEFTIGSLL-ASSESLEIVKMFQ--ALVSKNG 412
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
L S +++ +L+ ++K+G I AYQ++ +M ++IS +ISGF + + + + F
Sbjct: 413 LNSKIEVSNALVSAFSKHGQIEQAYQVFNNMSSPNLISWNTIISGFLFN-GFTLQGLEQF 471
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
++++ + + L ++L+ICA++++L G+QIH + + ++GNALI MYAK
Sbjct: 472 YELLMSTLKPNAYTLSIVLSICASISALRHGKQIHGYILRSGVFSVTSLGNALITMYAKC 531
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV-PNDVTFLSL 441
G++ + R F+ M ++++SW ++I+ YA+HG G EA+ +K M+ G V P+ TF ++
Sbjct: 532 GDLDWSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGVKPDQATFTAV 591
Query: 442 LFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
L ACSH GL +G +F M+N Y P A+H SC+VDL R G LE A +I ++K
Sbjct: 592 LSACSHAGLVDDGTRIFNSMVNDYGFEPGADHLSCIVDLLGRAGYLEEAERLINSKHLKI 651
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRK 561
+S+W + AC+ +GN LG + A L ++E YV+LSNIY AAG W+ A TR
Sbjct: 652 VSSIWWTLFSACAAHGNLRLGRIVAGFLLEIEQNDPAVYVLLSNIYAAAGQWEEAANTRD 711
Query: 562 LMEERSLRKNPGYSFLQS 579
LM++ + K PG S++ S
Sbjct: 712 LMQKTRVAKQPGCSWIGS 729
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 128/523 (24%), Positives = 252/523 (48%), Gaps = 45/523 (8%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T S L C + + + +HA+ I G ++ H+ ++ FYAK D++S ++ F
Sbjct: 52 DHFTLSSTLTACANLRYAASGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVF 111
Query: 89 DRMPERNVVSWT-------------------------------AMISGYAQNGYDENALL 117
+ + +V SWT A+I+G A+N + E AL
Sbjct: 112 NEIENPDVYSWTTLLSACTKLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEIALN 171
Query: 118 VFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYA 177
+F M + GVR +++T++S L C+ + L GR + + K F+ V +ALL +Y
Sbjct: 172 LFREMHQLGVRHDKYTFASVLSLCS-LELLDFGREVHTLVIKTGFLVRASVINALLTMYF 230
Query: 178 KCGWIEDAWILFERIER--KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTL 235
G + DA+ +FE E D +++N MIGGLA G ++++ +F+ M ++P T
Sbjct: 231 NSGKVADAYEVFEEAESTVHDDITFNVMIGGLASVGRDEEALIMFKEMQEACLRPTELTF 290
Query: 236 GSILRASVGGIELMKIS-QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML 294
S++ + ++S Q+H IK+G E+ ++ + + +Y+ G++ + + ++ +
Sbjct: 291 VSVMSSCSSA----RVSHQVHAQAIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVFDRLE 346
Query: 295 KTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGR 354
+ D+IS +I +A+ N + A F M + D+ + +L A+ SL + +
Sbjct: 347 EKDLISWNIIIMNYAQ-GNFYRLAILAFLQMQRAGIEPDEFTIGSLL---ASSESLEIVK 402
Query: 355 QIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG 414
A K + V NAL+ ++K G+I A + F+ M N+ISW ++I+G+ +G
Sbjct: 403 MFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNMSSPNLISWNTIISGFLFNG 462
Query: 415 YGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF 474
+ + +E + ++ + PN T +L C+ G ++ I + +
Sbjct: 463 FTLQGLEQFYELLMSTLKPNAYTLSIVLSICASISALRHGKQIH-GYILRSGVFSVTSLG 521
Query: 475 SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
+ ++ ++A+ G L+ + + MN + S W+A++ A + +G
Sbjct: 522 NALITMYAKCGDLDWSLRIFNVMNGRDIVS-WNAMISAYAQHG 563
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 196/434 (45%), Gaps = 53/434 (12%)
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
++ + FT SS L ACA +R+ G + SIQ G V + LL YAK +
Sbjct: 49 LKPDHFTLSSTLTACANLRYAASGNQLHAYSIQTG-LKAYTHVGNTLLSFYAKSKDLVSV 107
Query: 186 WILFERIERKDV-------------------------------VSWNAMIGGLAMQGFND 214
+F IE DV V WNA+I G A +
Sbjct: 108 QRVFNEIENPDVYSWTTLLSACTKLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTE 167
Query: 215 DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLGLESSNKLTGSL 273
+ LFR M + G++ D +T S+L S+ +EL+ ++H L+IK G + +L
Sbjct: 168 IALNLFREMHQLGVRHDKYTFASVL--SLCSLELLDFGREVHTLVIKTGFLVRASVINAL 225
Query: 274 IDVYAKYGSIRSAYQLYRSMLKT--DIISCTALISGFA---RDDNHSKEAFDLFKDMILK 328
+ +Y G + AY+++ T D I+ +I G A RD+ EA +FK+M
Sbjct: 226 LTMYFNSGKVADAYEVFEEAESTVHDDITFNVMIGGLASVGRDE----EALIMFKEMQEA 281
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ ++ +++ C +S + Q+HA A K V NA + MY+ G +
Sbjct: 282 CLRPTELTFVSVMSSC---SSARVSHQVHAQAIKMGFEACTPVSNAAMTMYSSCGNLHAV 338
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ FD + +K++ISW +I YA+ + AI + +M+ G+ P++ T SLL +
Sbjct: 339 HMVFDRLEEKDLISWNIIIMNYAQGNFYRLAILAFLQMQRAGIEPDEFTIGSLLASSE-- 396
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
+ E ++F +++K + + E + +V F++ GQ+E AY + M+ P W+
Sbjct: 397 --SLEIVKMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNMS-SPNLISWNT 453
Query: 509 ILGACSIYGNTSLG 522
I+ G T G
Sbjct: 454 IISGFLFNGFTLQG 467
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 137/287 (47%), Gaps = 38/287 (13%)
Query: 195 KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG-MKPDCFTLGSILRASVGGIELMKISQ 253
+ ++ N ++ L N S LF + +KPD FTL S L A +Q
Sbjct: 15 EQLIKINQLLAELTRSHHNSASVQLFVQIHSSNYLKPDHFTLSSTLTACANLRYAASGNQ 74
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS------- 306
+H I+ GL++ + +L+ YAK + S +++ + D+ S T L+S
Sbjct: 75 LHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIENPDVYSWTTLLSACTKLGQ 134
Query: 307 -GFA----------------------RDDNHSKEAFDLFKDMILKKMGI--DDVILCLML 341
G+A ++ H++ A +LF++M ++G+ D +L
Sbjct: 135 IGYACHLFNQTPRMIPVVWNAIITGCAENKHTEIALNLFREM--HQLGVRHDKYTFASVL 192
Query: 342 NICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD--KN 399
++C+ + L+ GR++H K A+V NAL+ MY SG++ADA F+E +
Sbjct: 193 SLCS-LELLDFGREVHTLVIKTGFLVRASVINALLTMYFNSGKVADAYEVFEEAESTVHD 251
Query: 400 VISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
I++ +I G A G EA+ ++K+M+ + P ++TF+S++ +CS
Sbjct: 252 DITFNVMIGGLASVGRDEEALIMFKEMQEACLRPTELTFVSVMSSCS 298
>gi|225450928|ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
[Vitis vinifera]
Length = 656
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 178/509 (34%), Positives = 287/509 (56%), Gaps = 2/509 (0%)
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV-RANQFT 133
Y++ G++ A K FD MP ++ +SW + ISG NG E VF + SG+ + +Q T
Sbjct: 99 YSRCGELRDATKVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQFDQAT 158
Query: 134 YSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE 193
++ L AC + + +MI + + + V +AL+ Y +CG +F+ +
Sbjct: 159 LTTVLTACDKPEFCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMS 218
Query: 194 RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ 253
K+VV+W A+I GL+ F ++S LF M + P+ T S L A G + + Q
Sbjct: 219 EKNVVTWTAVISGLSQGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQ 278
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN 313
IH L+ KLG+ + +L+D+Y+K GS+ A++++ S + D +S T ++ G A++
Sbjct: 279 IHGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGLAQN-G 337
Query: 314 HSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN 373
+E+ +F M+ + ID ++ +L + SL LG+QIH+ K + V N
Sbjct: 338 FEEESIQVFVKMVKNGVVIDPNMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNYFVNN 397
Query: 374 ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP 433
LI+MY+K G++ D+ + F M +N +SW S+IA +A+HG G A++LY++M+ EG+ P
Sbjct: 398 GLINMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRLEGVWP 457
Query: 434 NDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNM 493
DVTFLSLL AC+H GL +G M Y I PR EH++CVVD+ R G L A
Sbjct: 458 TDVTFLSLLHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKF 517
Query: 494 IRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAW 553
I ++ KP +W A+LGACSI+GN+ +G+ AA LF PE Y++L+NIY++ G W
Sbjct: 518 IERLPEKPGILVWQALLGACSIHGNSEMGKYAANQLFLQAPESPAPYILLANIYSSEGKW 577
Query: 554 DNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+T K M++ + K G S+++ K+
Sbjct: 578 KERARTIKKMKDMGVTKETGISWIEIEKQ 606
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/396 (31%), Positives = 213/396 (53%), Gaps = 17/396 (4%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
D +T ++L C + + +IH+ + GYE + + +I Y + G S R+
Sbjct: 154 FDQATLTTVLTACDKPEFCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRV 213
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD M E+NVV+WTA+ISG +Q + E +L +F M V N TY S+L AC+ ++ +
Sbjct: 214 FDEMSEKNVVTWTAVISGLSQGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAI 273
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ GR I G + K +L ++SAL+D+Y+KCG +EDAW +FE E D VS ++ GL
Sbjct: 274 REGRQIHGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGL 333
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIE--LMKISQIHDLIIKLGLES 265
A GF ++S +F M++ G+ D + +IL V GI+ L QIH LIIK S
Sbjct: 334 AQNGFEEESIQVFVKMVKNGVVIDPNMISAIL--GVFGIDTSLALGKQIHSLIIKKSFGS 391
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ + LI++Y+K G + + +++ M + + +S ++I+ FAR N S+ A L+++M
Sbjct: 392 NYFVNNGLINMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGSR-ALQLYEEM 450
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN------ALIDMY 379
L+ + DV +L+ CA+V + G F + D +G ++DM
Sbjct: 451 RLEGVWPTDVTFLSLLHACAHVGLVEKG-----MGFLESMAKDYGIGPRMEHYACVVDMM 505
Query: 380 AKSGEIADANRAFDEMGDK-NVISWTSLIAGYAKHG 414
++G + +A + + + +K ++ W +L+ + HG
Sbjct: 506 GRAGLLNEAKKFIERLPEKPGILVWQALLGACSIHG 541
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 210/407 (51%), Gaps = 24/407 (5%)
Query: 130 NQFTYSSALRACARMRWLQGGRMIQGSIQK------GRFVENL----FVKSALLDLYAKC 179
NQ S L C R +L G + SI K G +NL V ++LL +Y++C
Sbjct: 43 NQVDISFLLSLCGREGYLHLGSSLHASIIKNFGFLDGNNRDNLRNVIVVWNSLLSMYSRC 102
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGM-KPDCFTLGSI 238
G + DA +F+ + KD +SWN+ I GL G + F +F+ + G+ + D TL ++
Sbjct: 103 GELRDATKVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQFDQATLTTV 162
Query: 239 LRASVGGIELMKISQ-IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
L A E +S+ IH L+ G E + +LI Y + G S +++ M + +
Sbjct: 163 LTA-CDKPEFCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEKN 221
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
+++ TA+ISG ++ + +E+ LF M + + + L C+ + ++ GRQIH
Sbjct: 222 VVTWTAVISGLSQGQFY-EESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQIH 280
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
+K +D + +AL+DMY+K G + DA + F+ + + +S T ++ G A++G+
Sbjct: 281 GLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGLAQNGFEE 340
Query: 418 EAIELYKKMKHEGMV--PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF- 474
E+I+++ KM G+V PN ++ + +F T L G ++ + +I K + +F
Sbjct: 341 ESIQVFVKMVKNGVVIDPNMISAILGVFGID-TSLAL-GKQIHSLIIKKSF---GSNYFV 395
Query: 475 -SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTS 520
+ +++++++ G L+ + + M + + S W++++ A + +GN S
Sbjct: 396 NNGLINMYSKCGDLDDSIKIFCWMPQRNSVS-WNSMIAAFARHGNGS 441
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHA-----FAFKYQSSYD-----AAVGNALIDM 378
K I+ V + +L++C L+LG +HA F F ++ D V N+L+ M
Sbjct: 39 KFAINQVDISFLLSLCGREGYLHLGSSLHASIIKNFGFLDGNNRDNLRNVIVVWNSLLSM 98
Query: 379 YAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND-VT 437
Y++ GE+ DA + FD M K+ ISW S I+G +G ++K++ G+ D T
Sbjct: 99 YSRCGELRDATKVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQFDQAT 158
Query: 438 FLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
++L AC C ++ ++ Y + ++ + R G S + +M
Sbjct: 159 LTTVLTACDKPEF-CYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEM 217
Query: 498 NIKPTASLWSAILGACS 514
+ K + W+A++ S
Sbjct: 218 SEKNVVT-WTAVISGLS 233
>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 833
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 184/547 (33%), Positives = 305/547 (55%), Gaps = 3/547 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
+ +SLL + E IH + + G +S + ++ Y K G V + + F+
Sbjct: 263 SVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNET 322
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
E+N VSW ++I+G A G +AL F M+ +G + N T SS L + + G+
Sbjct: 323 VEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGK 382
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I G + ++F+ ++L+D+YAK G +A +F ++R+++VSWNAMI A+
Sbjct: 383 EIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNR 442
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
++ M G P+ T ++L A L +IH + +++GL S ++
Sbjct: 443 LPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSN 502
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
SLID+YAK G + SA ++ + K D +S LI G++ D+ ++ +LF +M L
Sbjct: 503 SLIDMYAKCGCLHSARNVFNTSRK-DEVSYNILIIGYSETDD-CLQSLNLFSEMRLLGKK 560
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
D V +++ CAN+A+L G+++H A + V N+L+D Y K G I A R
Sbjct: 561 PDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRL 620
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLT 451
F+++ K+V SW ++I GY G AI +++ M+ + + + V+++++L ACSH GL
Sbjct: 621 FNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLV 680
Query: 452 CEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
GW+ F++M+ + R+ P H++C+VDL R G +E A +I+Q+ I P A++W A+LG
Sbjct: 681 ERGWQYFSEMLAQ-RLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLG 739
Query: 512 ACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKN 571
AC IYGN LG AA +LF+++P+ Y++LSNIY G WD A K R+LM+ R +KN
Sbjct: 740 ACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKN 799
Query: 572 PGYSFLQ 578
PG S++Q
Sbjct: 800 PGCSWVQ 806
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/469 (28%), Positives = 244/469 (52%), Gaps = 13/469 (2%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGY-ESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
+++LL C ++ Q +HA I NG+ ++ L +I+ YAK S F++
Sbjct: 57 HINLLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFNQT 116
Query: 92 PE--RNVVSWTAMISGY--AQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
+ R W +I + A NG + ++ M+R GV+ + T+ L+ C+ +
Sbjct: 117 FQNCRTAFLWNTLIRAHSIAWNG-TFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDI 175
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G + G + K F +++V + LL LY CG++ DA LF+ + +DVVSWN +IG L
Sbjct: 176 CKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLL 235
Query: 208 AMQG-FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
++ G + + + F ++R +KP+ ++ S+L S + +IH +K+GL+S
Sbjct: 236 SVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQ 295
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+L+D Y K GS+++ +Q++ ++ + +S ++I+G A +A + F+ MI
Sbjct: 296 VTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLA-CKGRCWDALNAFRMMI 354
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ V + +L + + G++IH F+ + + D + N+LIDMYAKSG
Sbjct: 355 DAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHST 414
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
+A+ F + +N++SW ++IA YA + EAI +M+ G PN VTF ++L AC+
Sbjct: 415 EASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACA 474
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHF--SCVVDLFARRGQLESAYNM 493
G G E+ + RI ++ F + ++D++A+ G L SA N+
Sbjct: 475 RLGFLGPGKEIHAMGV---RIGLTSDLFVSNSLIDMYAKCGCLHSARNV 520
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 89/184 (48%), Gaps = 1/184 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D +++ ++ C + A +Q +H + N S+L +S ++ FY K G + A + F
Sbjct: 562 DVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLF 621
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+++ ++V SW MI GY G E A+ +F AM V+ + +Y + L AC+ ++
Sbjct: 622 NQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVE 681
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGGL 207
G + R + ++DL + G++E+A L +++ D W A++G
Sbjct: 682 RGWQYFSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGAC 741
Query: 208 AMQG 211
+ G
Sbjct: 742 RIYG 745
>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 698
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 205/557 (36%), Positives = 321/557 (57%), Gaps = 14/557 (2%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYES-NLHLSTKVIIFYAKVGDVLSARKAFDRMPE 93
SLLQ C R+ L+HA ++ +G + + L+ +I Y+ D+ SA + F MP
Sbjct: 25 SLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPR 84
Query: 94 RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMI 153
RN VSWT ++SG +QN +AL F+AM R+GV +F SSA RA A + G +
Sbjct: 85 RNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQL 144
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN 213
+ F LFV S L D+Y+KCG + +A +F+++ +KD V+W AMI G A G
Sbjct: 145 HCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSL 204
Query: 214 DDSFWLFRSMMRQGM-KPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKLTG 271
+ + FR M R+G+ D S+L AS GG++ +S+ IH + K G E +
Sbjct: 205 EAAVLSFRDMKREGLVGADQHVFCSVLSAS-GGLKDGWLSKSIHCCVTKAGFELEVAVRN 263
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTD-----IISCTALISGFARDDNHSKEAFDLFKDMI 326
+LID+YAK + SA ++ LK D ++S T++I G+ D +EA ++ ++
Sbjct: 264 ALIDMYAKSMDVESASRV----LKIDPGGWNVVSGTSMIDGYIETDC-VEEALVIYVELR 318
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ + ++ M+ CA A L G Q+HA K D+ VG+ L+DMY K G I+
Sbjct: 319 RQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLIS 378
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
+ + F+E+ + I+W ++I +A+HG+G EAI+ + +M + G+ PN + F+SLL ACS
Sbjct: 379 LSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACS 438
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
H GL EG + F M + I P+ EH+SC++D + R G+L+ AY I +M IKP A W
Sbjct: 439 HAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGW 498
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
++LGAC + G+ LGE+AA+NL +EP + +V LS IY + G W++ + RKLM +
Sbjct: 499 CSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDS 558
Query: 567 SLRKNPGYSFLQSSKKN 583
++K PG+S++ S+KK
Sbjct: 559 RIKKLPGFSWVDSNKKT 575
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 104/214 (48%), Gaps = 4/214 (1%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITN 59
+++ +T +++AL + ++P+ T+ S+++ C + Q +HA +I
Sbjct: 296 SMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKT 355
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
+ + + ++ Y K G + + + F+ + R ++W A+I+ +AQ+G+ A+ F
Sbjct: 356 DLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAF 415
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK-SALLDLYAK 178
M+ SG+R N + S L AC+ + G S+++ +E S ++D Y +
Sbjct: 416 DRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGR 475
Query: 179 CGWIEDAWILFERIE-RKDVVSWNAMIGGLAMQG 211
G +++A+ + + + W +++G M+G
Sbjct: 476 AGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRG 509
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 188/511 (36%), Positives = 283/511 (55%), Gaps = 15/511 (2%)
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
Y+K+ SAR P RNVVSWT++ISG AQNG+ AL+ F M R GV N FT+
Sbjct: 2 YSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTF 61
Query: 135 SSALRACARMRWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE 193
A +A A +R G+ I +++ GR ++ +FV + D+Y K +DA LF+ I
Sbjct: 62 PCAFKAVASLRLPVTGKQIHALAVKCGRILD-VFVGCSAFDMYCKTRLRDDARKLFDEIP 120
Query: 194 RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ 253
+++ +WNA I G ++ F R P+ T + L A + L Q
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 180
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN 313
+H L+++ G ++ + LID Y K IRS+ ++ M + +S +L++ + + N
Sbjct: 181 LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQ--N 238
Query: 314 HSKEAFDLF-----KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYD 368
H E + KD++ D ++ +L+ CA +A L LGR IHA A K
Sbjct: 239 HEDEKASVLYLRSRKDIV----ETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERT 294
Query: 369 AAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKH 428
VG+AL+DMY K G I D+ +AFDEM +KN+++ SLI GYA G A+ L+++M
Sbjct: 295 IFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAP 354
Query: 429 EGM--VPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
G PN +TF+SLL ACS G G ++F M + Y I P AEH+SC+VD+ R G
Sbjct: 355 RGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGM 414
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
+E AY I++M I+PT S+W A+ AC ++G LG LAA NLF ++P+ S N+V+LSN
Sbjct: 415 VERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNT 474
Query: 547 YTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
+ AAG W A R+ ++ ++K GYS++
Sbjct: 475 FAAAGRWAEANTVREELKGVGIKKGAGYSWI 505
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 136/274 (49%), Gaps = 7/274 (2%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ + L C D +H ++ +G+++++ + +I FY K + S+ F M
Sbjct: 161 TFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEM 220
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
+N VSW ++++ Y QN DE A +++ + V + F SS L ACA M L+ GR
Sbjct: 221 GTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGR 280
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I K +FV SAL+D+Y KCG IED+ F+ + K++V+ N++IGG A QG
Sbjct: 281 SIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQG 340
Query: 212 FNDDSFWLFRSMMRQGM--KPDCFTLGSILRAS--VGGIEL-MKISQIHDLIIKLGLESS 266
D + LF M +G P+ T S+L A G +E MKI + G+E
Sbjct: 341 QVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKI--FDSMRSTYGIEPG 398
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
+ ++D+ + G + AY+ + M IS
Sbjct: 399 AEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTIS 432
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 181/395 (45%), Gaps = 22/395 (5%)
Query: 175 LYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFT 234
+Y+K E A ++ ++VVSW ++I GLA G + F M R+G+ P+ FT
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60
Query: 235 LGSILRASVGGIEL-MKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+A V + L + QIH L +K G + S D+Y K A +L+ +
Sbjct: 61 FPCAFKA-VASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEI 119
Query: 294 LKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG 353
+ ++ + A IS + D +EA + F + + + C LN C++ LNLG
Sbjct: 120 PERNLETWNAFISN-SVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLG 178
Query: 354 RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKH 413
Q+H + D +V N LID Y K +I + F EMG KN +SW SL+A Y ++
Sbjct: 179 MQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQN 238
Query: 414 GYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEH 473
+A LY + + + + +D S+L AC+ G+ G EL I+ + + E
Sbjct: 239 HEDEKASVLYLRSRKDIVETSDFMISSVLSACA--GMA--GLELGRS-IHAHAVKACVER 293
Query: 474 F----SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
S +VD++ + G +E + +M K + S I G Y + ++A
Sbjct: 294 TIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGG----YAHQGQVDMALALF 349
Query: 530 FDMEPE---KSVNYVVLSNIYTA---AGAWDNARK 558
+M P + NY+ ++ +A AGA +N K
Sbjct: 350 EEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMK 384
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 167/372 (44%), Gaps = 15/372 (4%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IHA + G ++ + Y K ARK FD +PERN+ +W A IS +G
Sbjct: 80 IHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGR 139
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
A+ F R N T+ + L AC+ L G + G + + F ++ V +
Sbjct: 140 PREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNG 199
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+D Y KC I + I+F + K+ VSW +++ ++ + L+ + ++
Sbjct: 200 LIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETS 259
Query: 232 CFTLGSILRASVG--GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
F + S+L A G G+EL + IH +K +E + + +L+D+Y K G I + Q
Sbjct: 260 DFMISSVLSACAGMAGLELGR--SIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQA 317
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD--VILCLMLNICANV 347
+ M + ++++ +LI G+A A LF++M + G + +L+ C+
Sbjct: 318 FDEMPEKNLVTRNSLIGGYAH-QGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRA 376
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVG----NALIDMYAKSGEIADANRAFDEMGDKNVIS- 402
++ G +I +S+Y G + ++DM ++G + A +M + IS
Sbjct: 377 GAVENGMKIFD---SMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISV 433
Query: 403 WTSLIAGYAKHG 414
W +L HG
Sbjct: 434 WGALQNACRMHG 445
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 187/543 (34%), Positives = 304/543 (55%), Gaps = 20/543 (3%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IH H I G +++L +ST ++ Y K + A F MP R++V+W AM++GYA +G
Sbjct: 147 IHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGM 206
Query: 112 DENAL--LVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSI----------QK 159
+A+ L+ M +R N T + L A+ L G + K
Sbjct: 207 YHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSK 266
Query: 160 GRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWL 219
+ + + + +ALLD+YAKCG + A +F+ + ++ V+W+A+IGG + +F L
Sbjct: 267 SKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLL 326
Query: 220 FRSMMRQGMKPDCF----TLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLID 275
F++M+ QG+ CF ++ S LRA L Q+H L+ K G+ + SL+
Sbjct: 327 FKAMLAQGL---CFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLS 383
Query: 276 VYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDV 335
+YAK G I A L+ M D +S +AL+SG+ ++ ++EAF +FK M + D
Sbjct: 384 MYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGR-AEEAFLVFKKMQACNVEPDAA 442
Query: 336 ILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEM 395
+ ++ C+++A+L GR H + + ++ NALIDMYAK G I + + F+ M
Sbjct: 443 TMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMM 502
Query: 396 GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGW 455
++++SW ++IAGY HG G EA L+ +M + G P+ VTF+ LL ACSH+GL EG
Sbjct: 503 PSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGK 562
Query: 456 ELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSI 515
F M + Y + PR EH+ C+VDL +R G L+ AY I+ M ++ +W A+LGAC +
Sbjct: 563 HWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRV 622
Query: 516 YGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYS 575
Y N LG+ +R + ++ PE + N+V+LSNIY+AAG +D A + R + + + +K+PG S
Sbjct: 623 YKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCS 682
Query: 576 FLQ 578
+++
Sbjct: 683 WIE 685
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 142/497 (28%), Positives = 248/497 (49%), Gaps = 35/497 (7%)
Query: 79 GDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENA--LLVFSAMLRSGVRANQFTYSS 136
G + A FD++P +V ++ +I Y+ + A L ++ MLR V N +T+
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130
Query: 137 ALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKD 196
AL+AC+ + GR I +LFV +ALLD+Y KC + DA +F + +D
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190
Query: 197 VVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ--GMKPDCFTLGSILRASVGGIELMKISQI 254
+V+WNAM+ G A G + SM Q ++P+ TL ++L L + + +
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250
Query: 255 HDLIIKLGLE----SSNKLTG------SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
H I+ L S +KLT +L+D+YAK GS+ A +++ +M + ++ +AL
Sbjct: 251 HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMG-IDDVILCLMLNICANVASLNLGRQIHAFAFKY 363
I GF + +AF LFK M+ + + + + L CA++ L +G Q+HA K
Sbjct: 311 IGGFVLCSRMT-QAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKS 369
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELY 423
D GN+L+ MYAK+G I A FDEM K+ +S+++L++GY ++G EA ++
Sbjct: 370 GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVF 429
Query: 424 KKMKHEGMVPNDVTFLSLLFACSH-----TGLTCEGWELFTDMINKYRILPRAEHFSCVV 478
KKM+ + P+ T +SL+ ACSH G G + + ++ I + ++
Sbjct: 430 KKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSIC------NALI 483
Query: 479 DLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDME----P 534
D++A+ G+++ + + M + S W+ ++ I+G LG+ A +M P
Sbjct: 484 DMYAKCGRIDLSRQVFNMMPSRDIVS-WNTMIAGYGIHG---LGKEATALFLEMNNLGFP 539
Query: 535 EKSVNYVVLSNIYTAAG 551
V ++ L + + +G
Sbjct: 540 PDGVTFICLLSACSHSG 556
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 138/281 (49%), Gaps = 2/281 (0%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L P++ S L+ C R +HA + +G ++L ++ YAK G + A
Sbjct: 337 FLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIA 396
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FD M ++ VS++A++SGY QNG E A LVF M V + T S + AC+ +
Sbjct: 397 LFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAA 456
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
LQ GR GS+ + +AL+D+YAKCG I+ + +F + +D+VSWN MI G
Sbjct: 457 LQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAG 516
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLES 265
+ G ++ LF M G PD T +L A S G+ + H + GL
Sbjct: 517 YGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTP 576
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALI 305
+ ++D+ ++ G + AY+ +SM L+ D+ AL+
Sbjct: 577 RMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALL 617
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 184/561 (32%), Positives = 306/561 (54%), Gaps = 14/561 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D +T ++++ C + R + H + G L +++ ++ Y+K G + AR F
Sbjct: 298 DVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLF 357
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAM-LRSGVRANQFTYSSALRACA----- 142
D E+NV+SW +MI GY+++ A + M + V+ N+ T + L C
Sbjct: 358 D-TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQF 416
Query: 143 -RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN 201
+++ + G + G IQ V N FV YAKCG + A +F +E K V SWN
Sbjct: 417 LKLKEIHGYALRHGFIQSDELVANAFVAG-----YAKCGSLHYAEGVFCGMESKMVSSWN 471
Query: 202 AMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKL 261
A+IGG GF + L+ M G++PD FT+ S+L A L +IH +++
Sbjct: 472 ALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRN 531
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDL 321
G E + SL+ +Y + G I A + +M + +++ +I+GF++++ +A D+
Sbjct: 532 GFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNE-FPFDALDM 590
Query: 322 FKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
F M+ K+ D++ + L C+ V++L LG+++H FA K + + V +LIDMYAK
Sbjct: 591 FHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAK 650
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
G + + FD + K ++W LI GY HG+G +AIEL+K M++ G P+ VTF++L
Sbjct: 651 CGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIAL 710
Query: 442 LFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
L AC+H GL EG E M + + I P+ EH++CVVD+ R G+L A ++ ++ KP
Sbjct: 711 LTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKP 770
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRK 561
+ +WS++L +C Y + +GE A L ++ P+K+ NYV++SN Y G WD RK R+
Sbjct: 771 DSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQ 830
Query: 562 LMEERSLRKNPGYSFLQSSKK 582
M+E L+K+ G S+++ K
Sbjct: 831 RMKEIGLQKDAGCSWIEIGGK 851
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 142/498 (28%), Positives = 264/498 (53%), Gaps = 31/498 (6%)
Query: 10 TGQLKQALKFSLSCPDTLLDPSTYMS------LLQFCIDKKAERQAHLIHAHIITNG-YE 62
TG L QA F S + ++ S LLQ C + K IH I T+ ++
Sbjct: 67 TGNLNQAFNFLQSNLNDVVSSSNSKPKQLIGLLLQLCGEYKNIEIGRKIHNFISTSPHFQ 126
Query: 63 SNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAM 122
+++ L T+++ Y+ + F+ +N+ W A++SGY +N +A+ VF M
Sbjct: 127 NDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEM 186
Query: 123 LR-SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
+ + + FT ++AC + ++ G + G K + + ++FV +AL+ +Y K G+
Sbjct: 187 ISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGF 246
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR--QGMKPDCFTLGSI- 238
+E A +F+++ ++++VSWN+++ G ++S+ LF+ ++ +G+ PD T+ ++
Sbjct: 247 VESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVI 306
Query: 239 -LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
L A G + L + H L +KLGL K+ SL+D+Y+K G + A L+ + K +
Sbjct: 307 PLCARQGEVRLGMV--FHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDTNEK-N 363
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILK-KMGIDDVILCLMLNICANVASLNLGRQI 356
+IS ++I G+++D + + AF+L + M ++ K+ +++V L +L +C ++I
Sbjct: 364 VISWNSMIGGYSKDRDF-RGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEI 422
Query: 357 HAFAFKY---QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKH 413
H +A ++ QS D V NA + YAK G + A F M K V SW +LI G+ ++
Sbjct: 423 HGYALRHGFIQS--DELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQN 480
Query: 414 GYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH-TGLTCEGWELFTDMI-NKYRILPRA 471
G+ +A++LY M+ G+ P+ T SLL AC+ L+C G E+ M+ N + +
Sbjct: 481 GFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSC-GKEIHGSMLRNGFEL---- 535
Query: 472 EHFSCV--VDLFARRGQL 487
+ F C+ V L+ + G++
Sbjct: 536 DEFICISLVSLYVQCGKI 553
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 137/281 (48%), Gaps = 8/281 (2%)
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI-L 327
L L+ +Y+ S + ++ + + ++ AL+SG+ R+ F +F +MI L
Sbjct: 131 LITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVF-VFVEMISL 189
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ D+ L ++ C V + LG +H FA K + D VGNALI MY K G +
Sbjct: 190 TEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVES 249
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKH--EGMVPNDVTFLSLLFAC 445
A + FD+M +N++SW S++ ++G E+ L+K + + EG++P+ T ++++ C
Sbjct: 250 AVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLC 309
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
+ G G +F + K + + S ++D++++ G L A ++ N K S
Sbjct: 310 ARQGEVRLGM-VFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEA-RVLFDTNEKNVIS- 366
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
W++++G S G ME + VN V L N+
Sbjct: 367 WNSMIGGYS-KDRDFRGAFELLRKMQMEDKVKVNEVTLLNV 406
>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
Length = 766
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 178/530 (33%), Positives = 300/530 (56%), Gaps = 4/530 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HA I S+L + ++ Y+K G V F+R+ +++++SW ++I+G AQ G
Sbjct: 170 VHAQAIKWESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGR 229
Query: 112 DENALLVFSAMLRSGVR-ANQFTYSSALRACARM-RWLQGGRMIQGSIQKGRFVENLFVK 169
+ +AL +F M+ GV N+F + S RAC+ + L+ G I G K + N +
Sbjct: 230 EMDALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSVKYQLDRNSYAG 289
Query: 170 SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
+L D+YA+C ++ A +F RIE D+VSWN++I + +G ++ LF M G++
Sbjct: 290 CSLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLR 349
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
PD T+ ++L A VG L + IH ++KLGL ++ SL+ +YA+ SA +
Sbjct: 350 PDGITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDVIVSNSLLSMYARCLDFSSAMDV 409
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ D+++ ++++ + H ++ F LF + +D + L +L+ A +
Sbjct: 410 FHETHDRDVVTWNSILTACVQH-QHLEDVFKLFSLLHRSMPSLDRISLNNVLSASAELGY 468
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD-KNVISWTSLIA 408
+ +Q+HA+AFK DA + N LID YAK G + DAN+ F+ MG ++V SW+SLI
Sbjct: 469 FEMVKQVHAYAFKVGLVGDAMLSNGLIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIV 528
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
GYA+ GY EA++L+ +M++ G+ PN VTF+ +L ACS GL EG ++ M +Y I+
Sbjct: 529 GYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLTACSRVGLVDEGCYYYSIMKPEYGIV 588
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARN 528
P EH SCV+DL AR G+L A + QM +P +W +L A + + +G+ AA
Sbjct: 589 PTREHCSCVLDLLARAGRLSEAAKFVDQMPFEPDIIMWKTLLAASRTHNDVDMGKRAAEG 648
Query: 529 LFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+ +++P S YV+L NIY ++G W+ + +K M ++K+PG S+++
Sbjct: 649 VLNIDPSHSAAYVLLCNIYASSGNWNEFARLKKDMRSSGVQKSPGKSWIK 698
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 158/533 (29%), Positives = 270/533 (50%), Gaps = 33/533 (6%)
Query: 8 FKTGQLKQALKFSLSCPDTL--------LDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
+ G+L AL+ S P + L P+ Y +L+ C ++ Q L+H H++ +
Sbjct: 12 YHAGRLSAALRAFESIPSSAASASAHDRLSPAAYAALVAACSRLRSLPQGRLVHRHLLAS 71
Query: 60 GYES-----NLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDEN 114
N LS +I Y + G SAR FD M +RN VSW A+I+ +AQN +
Sbjct: 72 SARDRFLAHNTILSNHLITMYGRCGAPDSARVVFDGMLDRNPVSWAAVIAAHAQNSRCAD 131
Query: 115 ALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLD 174
A+ +FS+MLRSG +QF SA+ AC+ + L GR + K +L V++AL+
Sbjct: 132 AMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQVHAQAIKWESGSDLIVQNALVT 191
Query: 175 LYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGM-KPDCF 233
+Y+K G + D + LFERI KD++SW ++I GLA QG D+ +FR M+ +G+ P+ F
Sbjct: 192 MYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGREMDALQIFREMIAEGVHHPNEF 251
Query: 234 TLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRS 292
GS+ RA SV L QIH + +K L+ ++ SL D+YA+ + SA +++
Sbjct: 252 HFGSVFRACSVVVNSLEYGEQIHGVSVKYQLDRNSYAGCSLSDMYARCNELDSARKVFYR 311
Query: 293 MLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNL 352
+ D++S +LI+ F+ S EA LF +M + D + + +L C +L+
Sbjct: 312 IESPDLVSWNSLINAFSAKGLLS-EAMVLFSEMRDSGLRPDGITVMALLCACVGYDALHQ 370
Query: 353 GRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAK 412
GR IH++ K D V N+L+ MYA+ + + A F E D++V++W S++ +
Sbjct: 371 GRSIHSYLVKLGLGGDVIVSNSLLSMYARCLDFSSAMDVFHETHDRDVVTWNSILTACVQ 430
Query: 413 HGYGHEAIELYKKMKHEGMVPND-VTFLSLLFACSHTGLTCEGWELFTDMIN-------K 464
H + + +L+ + H M D ++ ++L A + G + +M+ K
Sbjct: 431 HQHLEDVFKLF-SLLHRSMPSLDRISLNNVLSASAELG--------YFEMVKQVHAYAFK 481
Query: 465 YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
++ A + ++D +A+ G L+ A + M WS+++ + +G
Sbjct: 482 VGLVGDAMLSNGLIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFG 534
>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 700
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 183/530 (34%), Positives = 301/530 (56%), Gaps = 3/530 (0%)
Query: 51 LIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
+IH + ++++ + + +I Y+K G + A K F P+++VV WT++I+GY QNG
Sbjct: 126 MIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNG 185
Query: 111 YDENALLVFSAML-RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK 169
E AL FS M+ V + T SA ACA++ GR + G +++ F L +
Sbjct: 186 SPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLA 245
Query: 170 SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
+++L+LY K G I A LF + KD++SW++M+ A G ++ LF M+ + ++
Sbjct: 246 NSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIE 305
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
+ T+ S LRA L + IH L + G E ++ +L+D+Y K S ++A L
Sbjct: 306 LNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDL 365
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ M K D++S L SG+A + + ++ +F +M+ D + L +L + +
Sbjct: 366 FNRMPKKDVVSWAVLFSGYA-EIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGI 424
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
+ +HAF K + +G +LI++YAK I +AN+ F M K+V++W+S+IA
Sbjct: 425 VQQALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAA 484
Query: 410 YAKHGYGHEAIELYKKM-KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
Y HG G EA++L+ +M H + PNDVTF+S+L ACSH GL EG ++F M+N+Y+++
Sbjct: 485 YGFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLM 544
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARN 528
P EH+ +VDL R G+L+ A +MI +M ++ +W A+LGAC I+ N +GELAA N
Sbjct: 545 PNTEHYGIMVDLLGRMGELDKALDMINEMPMQAGPHVWGALLGACRIHQNIKIGELAALN 604
Query: 529 LFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
LF ++P + Y +LSNIY W +A K R L++E +K G S ++
Sbjct: 605 LFLLDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRFKKIVGQSMVE 654
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 150/522 (28%), Positives = 264/522 (50%), Gaps = 15/522 (2%)
Query: 34 MSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPE 93
+ LL+ C K + Q +H+ + G + + TK+ + YA+ + A K F+ P
Sbjct: 8 VKLLETCCSKISIPQ---LHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPC 64
Query: 94 RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV---RANQFTYSSALRACARMRWLQGG 150
+ V W A++ Y G L +F M + R + +T S AL++C+ ++ L+ G
Sbjct: 65 KTVYLWNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELG 124
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+MI G ++K + ++FV SAL++LY+KCG + DA +F ++DVV W ++I G
Sbjct: 125 KMIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQN 184
Query: 211 GFNDDSFWLF-RSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
G + + F R ++ + + PD TL S A + +H + + G ++ L
Sbjct: 185 GSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCL 244
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
S++++Y K GSIRSA L+R M DIIS +++++ +A D+ A +LF +MI K+
Sbjct: 245 ANSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYA-DNGAETNALNLFNEMIDKR 303
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ ++ V + L CA+ ++L G+ IH A Y D V AL+DMY K +A
Sbjct: 304 IELNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAI 363
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
F+ M K+V+SW L +GYA+ G H+++ ++ M G P+ + + +L A S G
Sbjct: 364 DLFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELG 423
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
+ + L ++K + +++L+A+ +++A + + M K + WS+I
Sbjct: 424 IVQQALCLHA-FVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVT-WSSI 481
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSV--NYVVLSNIYTA 549
+ A YG GE A + + M V N V +I +A
Sbjct: 482 IAA---YGFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSA 520
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 134/268 (50%), Gaps = 2/268 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L+ T +S L+ C + IH + G+E ++ +ST ++ Y K +A
Sbjct: 306 LNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDL 365
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F+RMP+++VVSW + SGYA+ G +L VF ML G R + L A + + +
Sbjct: 366 FNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIV 425
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
Q + + K F N F+ ++L++LYAKC I++A +F+ + RKDVV+W+++I
Sbjct: 426 QQALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAY 485
Query: 208 AMQGFNDDSFWLFRSMMRQG-MKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLES 265
G +++ LF M +KP+ T SIL A S G+ I H ++ + L
Sbjct: 486 GFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMP 545
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ + G ++D+ + G + A + M
Sbjct: 546 NTEHYGIMVDLLGRMGELDKALDMINEM 573
>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
Length = 741
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 183/535 (34%), Positives = 298/535 (55%), Gaps = 9/535 (1%)
Query: 49 AHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQ 108
AH + ++ +N+ +ST ++ Y K+G + AR+ FD+MP RN VSW AM+SGYA
Sbjct: 142 AHAFACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYAT 201
Query: 109 NGYDENALLVFSAMLRS-GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLF 167
E A +F ML+ + N+F ++ L A + L G + G + K V +
Sbjct: 202 GKCSEEAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVS 261
Query: 168 VKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
V+++L+ +YAK ++ A +F + ++ ++W+AMI G A G D + +F M G
Sbjct: 262 VENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAG 321
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSA- 286
P FT IL AS L+ Q H L++KLG E + +L+D+YAK G A
Sbjct: 322 FSPTEFTFVGILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAK 381
Query: 287 ---YQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNI 343
+QLY D++ TA+I+G ++ H +EA L+ M + + + + +L
Sbjct: 382 DGFHQLYDV---DDVVIWTAMITGHVQNGEH-EEALMLYSRMDKEGVMPSYLTVTSVLRA 437
Query: 344 CANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISW 403
CA +A+L G+Q+HA K +VG AL MY+K G + D+ F M D+++ISW
Sbjct: 438 CACLAALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISW 497
Query: 404 TSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMIN 463
S+I+G+++HG G +A++L+++MK EG+ P+ +TF+++L ACSH GL GW F M
Sbjct: 498 NSIISGFSQHGRGRDALDLFEEMKLEGIAPDHITFINVLCACSHMGLVDRGWFYFRAMSK 557
Query: 464 KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGE 523
Y ++P+ +H++C+VD+ +R GQL+ A + I + I LW +LGAC + +G
Sbjct: 558 DYGLIPKLDHYACIVDILSRAGQLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGA 617
Query: 524 LAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
A L ++ E S Y++LSNIY A W++ + R LM R + K+PG S+++
Sbjct: 618 YAGEQLMELGTEDSSAYILLSNIYAAQRKWNDVERVRHLMRLRGVSKDPGCSWVE 672
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 140/270 (51%), Gaps = 14/270 (5%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T++ +L D A H ++ G+E +++ + ++ YAK G A+ F ++
Sbjct: 328 TFVGILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQL 387
Query: 92 PE-RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+ +VV WTAMI+G+ QNG E AL+++S M + GV + T +S LRACA + L+ G
Sbjct: 388 YDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPG 447
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ + I K F V +AL +Y+KCG +ED+ ++F R+ +D++SWN++I G +
Sbjct: 448 KQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQH 507
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV-------GGIELMKISQIHDLIIKLGL 263
G D+ LF M +G+ PD T ++L A G +S+ + LI KL
Sbjct: 508 GRGRDALDLFEEMKLEGIAPDHITFINVLCACSHMGLVDRGWFYFRAMSKDYGLIPKL-- 565
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
++D+ ++ G ++ A S+
Sbjct: 566 ----DHYACIVDILSRAGQLKEAKDFIESI 591
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 181/394 (45%), Gaps = 18/394 (4%)
Query: 140 ACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG--WIEDAWILFERIER--K 195
A + +R + G + G K + V ++L+ Y + A+ +F I +
Sbjct: 23 AASSVRTRRAGDALHGWALKSGAASHTPVSNSLITFYCSPPRPLLGAAFAVFADIPAGLR 82
Query: 196 DVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ--GMKPDCFTLGSILRASVGGIELMKISQ 253
DV SWN+++ L+ + FRSMM + P + ++ A+ +
Sbjct: 83 DVASWNSLLNPLSRHQ-PLAALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGAV 141
Query: 254 IHDLIIKLGLESSNK---LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR 310
H KL S + ++ +L+++Y K G+I A +++ M + +S A++SG+A
Sbjct: 142 AHAFACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYAT 201
Query: 311 DDNHSKEAFDLFKDMILK-KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDA 369
S+EAF+LF+ M+ + + ++ + +L+ + L +G Q+H K
Sbjct: 202 GKC-SEEAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFV 260
Query: 370 AVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE 429
+V N+L+ MYAK+ + A F ++N I+W+++I GYA++G A ++ +M
Sbjct: 261 SVENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSA 320
Query: 430 GMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLES 489
G P + TF+ +L A S G G + M+ K + S +VD++A+ G
Sbjct: 321 GFSPTEFTFVGILNASSDMGALVVGKQAHGLMV-KLGFERQVYVKSALVDMYAKCGCTGD 379
Query: 490 AYNMIRQMNIKPTASLWSAILGACSIYGNTSLGE 523
A + Q+ +W+A+ I G+ GE
Sbjct: 380 AKDGFHQLYDVDDVVIWTAM-----ITGHVQNGE 408
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 96/193 (49%), Gaps = 3/193 (1%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNG 60
++ + + G+ ++AL + PS T S+L+ C A +HA I+ G
Sbjct: 399 MITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPGKQLHAQILKCG 458
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+ + T + Y+K G++ + F RMP+R+++SW ++ISG++Q+G +AL +F
Sbjct: 459 FGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGRDALDLFE 518
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGR-FVENLFVKSALLDLYAKC 179
M G+ + T+ + L AC+ M + G ++ K + L + ++D+ ++
Sbjct: 519 EMKLEGIAPDHITFINVLCACSHMGLVDRGWFYFRAMSKDYGLIPKLDHYACIVDILSRA 578
Query: 180 GWIEDAWILFERI 192
G +++A E I
Sbjct: 579 GQLKEAKDFIESI 591
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 182/559 (32%), Positives = 307/559 (54%), Gaps = 3/559 (0%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
D D T++ +L + + +H + G + L +S +I Y K+ A
Sbjct: 310 DVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFA 369
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
R FD M ER+++SW ++I+G AQNG + A+ +F +LR G++ +Q+T +S L+A + +
Sbjct: 370 RTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSL 429
Query: 145 -RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
L + + K V + FV +AL+D Y++ +++A ILFER D+V+WNAM
Sbjct: 430 PEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAM 488
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGL 263
+ G + LF M +QG + D FTL ++ + + + Q+H IK G
Sbjct: 489 MAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGY 548
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
+ ++ ++D+Y K G + +A + S+ D ++ T +ISG ++ + AF +F
Sbjct: 549 DLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISG-CIENGEEERAFHVFS 607
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
M L + D+ + + + + +L GRQIHA A K + D VG +L+DMYAK G
Sbjct: 608 QMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCG 667
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
I DA F + N+ +W +++ G A+HG G E ++L+K+MK G+ P+ VTF+ +L
Sbjct: 668 SIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLS 727
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
ACSH+GL E ++ M Y I P EH+SC+ D R G ++ A N+I M+++ +A
Sbjct: 728 ACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASA 787
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
S++ +L AC + G+T G+ A L ++EP S YV+LSN+Y AA WD + R +M
Sbjct: 788 SMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMM 847
Query: 564 EERSLRKNPGYSFLQSSKK 582
+ ++K+PG+S+++ K
Sbjct: 848 KGHKVKKDPGFSWIEVKNK 866
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 123/468 (26%), Positives = 213/468 (45%), Gaps = 46/468 (9%)
Query: 53 HAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY- 111
HA I+T L +I Y+K G + AR+ FD+MP+R++VSW ++++ YAQ+
Sbjct: 62 HARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSEC 121
Query: 112 ----DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLF 167
+ A L+F + + V ++ T S L+ C ++ G K + F
Sbjct: 122 VVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEF 181
Query: 168 VKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
V AL+++Y K G +++ +LFE + +DVV WN M+ GF +++ L + G
Sbjct: 182 VAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSG 241
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
+ P+ TL + R ++G D G ++S
Sbjct: 242 LNPNEITLRLLAR----------------------------ISGDDSDA----GQVKSFA 269
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
+ ++II +S + +S F DM+ + D V LML V
Sbjct: 270 NGNDASSVSEIIFRNKGLSEYLHSGQYSA-LLKCFADMVESDVECDQVTFILMLATAVKV 328
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI 407
SL LG+Q+H A K V N+LI+MY K + A FD M ++++ISW S+I
Sbjct: 329 DSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVI 388
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM-INKYR 466
AG A++G EA+ L+ ++ G+ P+ T S+L A S EG L + ++ +
Sbjct: 389 AGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLP---EGLSLSKQVHVHAIK 445
Query: 467 ILPRAEHF--SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
I ++ F + ++D ++R ++ A + + N A W+A++
Sbjct: 446 INNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFDLVA--WNAMMAG 491
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/489 (22%), Positives = 210/489 (42%), Gaps = 49/489 (10%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T +L+ C+ + H + G + + ++ ++ Y K G V + F+ M
Sbjct: 147 TLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEM 206
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P R+VV W M+ Y + G+ E A+ + SA SG+ N+ T LR AR + G
Sbjct: 207 PYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT----LRLLAR---ISGDD 259
Query: 152 MIQGSIQK------GRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
G ++ V + ++ L Y G F + DV
Sbjct: 260 SDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVEC------ 313
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
+ +F L M+ +K D LG Q+H + +KLGL+
Sbjct: 314 -------DQVTFIL---MLATAVKVDSLALG---------------QQVHCMALKLGLDL 348
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
++ SLI++Y K A ++ +M + D+IS ++I+G A+ + EA LF +
Sbjct: 349 MLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQ-NGLEVEAVCLFMQL 407
Query: 326 ILKKMGIDDVILCLMLNICANVAS-LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
+ + D + +L +++ L+L +Q+H A K + D+ V ALID Y+++
Sbjct: 408 LRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRC 467
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ +A F E + ++++W +++AGY + GH+ ++L+ M +G +D T ++
Sbjct: 468 MKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKT 526
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
C +G ++ I L S ++D++ + G + +A + + P
Sbjct: 527 CGFLFAINQGKQVHAYAIKSGYDLDLWVS-SGILDMYVKCGDMSAAQFAFDSIPV-PDDV 584
Query: 505 LWSAILGAC 513
W+ ++ C
Sbjct: 585 AWTTMISGC 593
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 99/204 (48%), Gaps = 4/204 (1%)
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
LR ++ +LM H I+ L +LI +Y+K GS+ A +++ M D+
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 299 ISCTALISGFARDD----NHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGR 354
+S ++++ +A+ + ++AF LF+ + + + L ML +C + +
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASE 165
Query: 355 QIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG 414
H +A K D V AL+++Y K G++ + F+EM ++V+ W ++ Y + G
Sbjct: 166 SFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMG 225
Query: 415 YGHEAIELYKKMKHEGMVPNDVTF 438
+ EAI+L G+ PN++T
Sbjct: 226 FKEEAIDLSSAFHSSGLNPNEITL 249
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 59/107 (55%), Gaps = 5/107 (4%)
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI 407
+ L LG+ HA ++ + + + N LI MY+K G + A R FD+M D++++SW S++
Sbjct: 53 SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112
Query: 408 AGYAKHGYG-----HEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
A YA+ +A L++ ++ + + + +T +L C H+G
Sbjct: 113 AAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSG 159
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 193/551 (35%), Positives = 308/551 (55%), Gaps = 8/551 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ SLL+ C + +HA + G +S +T + YAK AR+ FDRM
Sbjct: 61 TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRM 120
Query: 92 PERNVVSWTAMISGYAQNGYDENAL-LVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
P R+ V+W A+++GYA+NG A+ +V G R + T S L ACA R L
Sbjct: 121 PVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAAC 180
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
R + E + V +A+LD Y KCG I A ++F+ + K+ VSWNAMI G A
Sbjct: 181 REAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQN 240
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ---IHDLIIKLGLESSN 267
G + ++ LF M+ +G+ T S+L A EL + + +H+L++++GL+S+
Sbjct: 241 GDSREALALFNRMVEEGVD---VTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNV 297
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ +LI +Y+K + A ++ + + +S A+I G A++ S++A LF M L
Sbjct: 298 SVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQN-GCSEDAVRLFTRMQL 356
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ + D L ++ A+++ R IH ++ + D V ALIDMYAK G +
Sbjct: 357 ENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNI 416
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A F+ +++VI+W ++I GY HG+G A+EL+++MK G+VPN+ TFLS+L ACSH
Sbjct: 417 ARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSH 476
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
GL EG E FT M Y + P EH+ +VDL R G+L+ A+ I++M + P S++
Sbjct: 477 AGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYG 536
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
A+LGAC ++ N L E +A+ +F++ P++ V +V+L+NIY A W + + R ME+
Sbjct: 537 AMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNG 596
Query: 568 LRKNPGYSFLQ 578
L+K PG+S +Q
Sbjct: 597 LQKTPGWSIIQ 607
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 126/465 (27%), Positives = 224/465 (48%), Gaps = 29/465 (6%)
Query: 115 ALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLD 174
AL F AM +G T++S L+ CA L GR + + +AL +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 175 LYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSF-WLFRSMMRQGMKPDCF 233
+YAKC DA +F+R+ +D V+WNA++ G A G + + R +G +PD
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 234 TLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
TL S+L A L + H I+ GLE + +++D Y K G IR+A ++ M
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222
Query: 294 LKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG 353
+ +S A+I G+A++ + S+EA LF M+ + + + DV + L C + L+ G
Sbjct: 223 PTKNSVSWNAMIDGYAQNGD-SREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEG 281
Query: 354 RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKH 413
++H + + +V NALI MY+K + A+ FDE+ + +SW ++I G A++
Sbjct: 282 MRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQN 341
Query: 414 GYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG-WELFTDMINKYRILPRAE 472
G +A+ L+ +M+ E + P+ T +S++ A + + W I+ Y I +
Sbjct: 342 GCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARW------IHGYSIRLHLD 395
Query: 473 H----FSCVVDLFARRGQLESA---YNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
+ ++D++A+ G++ A +N R+ ++ W+A++ YG+ G+ A
Sbjct: 396 QDVYVLTALIDMYAKCGRVNIARILFNSARERHV----ITWNAMIHG---YGSHGFGKAA 448
Query: 526 ARNLFDME-----PEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
+M+ P ++ VLS + AG D R+ M+E
Sbjct: 449 VELFEEMKSIGIVPNETTFLSVLSAC-SHAGLVDEGREYFTSMKE 492
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 193/551 (35%), Positives = 308/551 (55%), Gaps = 8/551 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ SLL+ C + +HA + G +S +T + YAK AR+ FDRM
Sbjct: 61 TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRM 120
Query: 92 PERNVVSWTAMISGYAQNGYDENAL-LVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
P R+ V+W A+++GYA+NG A+ +V G R + T S L ACA R L
Sbjct: 121 PVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAAC 180
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
R + E + V +A+LD Y KCG I A ++F+ + K+ VSWNAMI G A
Sbjct: 181 REAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQN 240
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ---IHDLIIKLGLESSN 267
G + ++ LF M+ +G+ T S+L A EL + + +H+L++++GL+S+
Sbjct: 241 GDSREALALFNRMVEEGVD---VTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNV 297
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ +LI +Y+K + A ++ + + +S A+I G A++ S++A LF M L
Sbjct: 298 SVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQN-GCSEDAVRLFTRMQL 356
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ + D L ++ A+++ R IH ++ + D V ALIDMYAK G +
Sbjct: 357 ENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNI 416
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A F+ +++VI+W ++I GY HG+G A+EL+++MK G+VPN+ TFLS+L ACSH
Sbjct: 417 ARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSH 476
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
GL EG E FT M Y + P EH+ +VDL R G+L+ A+ I++M + P S++
Sbjct: 477 AGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYG 536
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
A+LGAC ++ N L E +A+ +F++ P++ V +V+L+NIY A W + + R ME+
Sbjct: 537 AMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNG 596
Query: 568 LRKNPGYSFLQ 578
L+K PG+S +Q
Sbjct: 597 LQKTPGWSIIQ 607
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 126/465 (27%), Positives = 224/465 (48%), Gaps = 29/465 (6%)
Query: 115 ALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLD 174
AL F AM +G T++S L+ CA L GR + + +AL +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 175 LYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSF-WLFRSMMRQGMKPDCF 233
+YAKC DA +F+R+ +D V+WNA++ G A G + + R +G +PD
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 234 TLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
TL S+L A L + H I+ GLE + +++D Y K G IR+A ++ M
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222
Query: 294 LKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG 353
+ +S A+I G+A++ + S+EA LF M+ + + + DV + L C + L+ G
Sbjct: 223 PTKNSVSWNAMIDGYAQNGD-SREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEG 281
Query: 354 RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKH 413
++H + + +V NALI MY+K + A+ FDE+ + +SW ++I G A++
Sbjct: 282 MRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQN 341
Query: 414 GYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG-WELFTDMINKYRILPRAE 472
G +A+ L+ +M+ E + P+ T +S++ A + + W I+ Y I +
Sbjct: 342 GCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARW------IHGYSIRLHLD 395
Query: 473 H----FSCVVDLFARRGQLESA---YNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
+ ++D++A+ G++ A +N R+ ++ W+A++ YG+ G+ A
Sbjct: 396 QDVYVLTALIDMYAKCGRVNIARILFNSARERHV----ITWNAMIHG---YGSHGFGKAA 448
Query: 526 ARNLFDME-----PEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
+M+ P ++ VLS + AG D R+ M+E
Sbjct: 449 VELFEEMKSIGIVPNETTFLSVLSAC-SHAGLVDEGREYFTSMKE 492
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 187/543 (34%), Positives = 304/543 (55%), Gaps = 20/543 (3%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IH H I G +++L +ST ++ Y K + A F MP R++V+W AM++GYA +G
Sbjct: 32 IHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGM 91
Query: 112 DENAL--LVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSI----------QK 159
+A+ L+ M +R N T + L A+ L G + K
Sbjct: 92 YHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSK 151
Query: 160 GRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWL 219
+ + + + +ALLD+YAKCG + A +F+ + ++ V+W+A+IGG + +F L
Sbjct: 152 SKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLL 211
Query: 220 FRSMMRQGMKPDCF----TLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLID 275
F++M+ QG+ CF ++ S LRA L Q+H L+ K G+ + SL+
Sbjct: 212 FKAMLAQGL---CFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLS 268
Query: 276 VYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDV 335
+YAK G I A L+ M D +S +AL+SG+ ++ ++EAF +FK M + D
Sbjct: 269 MYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGR-AEEAFLVFKKMQACNVEPDAA 327
Query: 336 ILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEM 395
+ ++ C+++A+L GR H + + ++ NALIDMYAK G I + + F+ M
Sbjct: 328 TMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMM 387
Query: 396 GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGW 455
++++SW ++IAGY HG G EA L+ +M + G P+ VTF+ LL ACSH+GL EG
Sbjct: 388 PSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGK 447
Query: 456 ELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSI 515
F M + Y + PR EH+ C+VDL +R G L+ AY I+ M ++ +W A+LGAC +
Sbjct: 448 HWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRV 507
Query: 516 YGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYS 575
Y N LG+ +R + ++ PE + N+V+LSNIY+AAG +D A + R + + + +K+PG S
Sbjct: 508 YKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCS 567
Query: 576 FLQ 578
+++
Sbjct: 568 WIE 570
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 227/452 (50%), Gaps = 33/452 (7%)
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
MLR V N +T+ AL+AC+ + GR I +LFV +ALLD+Y KC
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ--GMKPDCFTLGSIL 239
+ DA +F + +D+V+WNAM+ G A G + SM Q ++P+ TL ++L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 240 RASVGGIELMKISQIHDLIIKLGLE----SSNKLT------GSLIDVYAKYGSIRSAYQL 289
L + + +H I+ L S +KLT +L+D+YAK GS+ A ++
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG-IDDVILCLMLNICANVA 348
+ +M + ++ +ALI GF + +AF LFK M+ + + + + L CA++
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMT-QAFLLFKAMLAQGLCFLSPTSIASALRACASLD 239
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA 408
L +G Q+HA K D GN+L+ MYAK+G I A FDEM K+ +S+++L++
Sbjct: 240 HLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVS 299
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT-----GLTCEGWELFTDMIN 463
GY ++G EA ++KKM+ + P+ T +SL+ ACSH G G + + +
Sbjct: 300 GYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLAS 359
Query: 464 KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGE 523
+ I + ++D++A+ G+++ + + M + S W+ ++ I+G LG+
Sbjct: 360 ETSIC------NALIDMYAKCGRIDLSRQVFNMMPSRDIVS-WNTMIAGYGIHG---LGK 409
Query: 524 LAARNLFDME----PEKSVNYVVLSNIYTAAG 551
A +M P V ++ L + + +G
Sbjct: 410 EATALFLEMNNLGFPPDGVTFICLLSACSHSG 441
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 138/281 (49%), Gaps = 2/281 (0%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L P++ S L+ C R +HA + +G ++L ++ YAK G + A
Sbjct: 222 FLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIA 281
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FD M ++ VS++A++SGY QNG E A LVF M V + T S + AC+ +
Sbjct: 282 LFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAA 341
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
LQ GR GS+ + +AL+D+YAKCG I+ + +F + +D+VSWN MI G
Sbjct: 342 LQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAG 401
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLES 265
+ G ++ LF M G PD T +L A S G+ + H + GL
Sbjct: 402 YGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTP 461
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALI 305
+ ++D+ ++ G + AY+ +SM L+ D+ AL+
Sbjct: 462 RMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALL 502
>gi|449508637|ref|XP_004163369.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 594
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 177/512 (34%), Positives = 280/512 (54%), Gaps = 3/512 (0%)
Query: 68 STKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV 127
+T +I Y G A F+ +PER+VV+WTAMI G+ + A +FS MLRS V
Sbjct: 46 ATNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEV 105
Query: 128 RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYA-KCGWIEDAW 186
+ N FT SS L+AC M+ L G + K +++V++ALLD+YA C ++DA
Sbjct: 106 QPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDAL 165
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+F I K VSW +I G +G FR M+ + + P+ F+ RA
Sbjct: 166 SVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASIS 225
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
QIH + K GL + S++D+Y + + A + + + + ++I+ LI+
Sbjct: 226 SYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIA 285
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
G+ R D S E+ LF M + + + CAN+A L+ G+Q+H +
Sbjct: 286 GYERSD--SSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFD 343
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
+ A+ N+LIDMYAK G I+D+++ F +M ++++SWT+++ GY HGYG EA++L+ +M
Sbjct: 344 KNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEM 403
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
G+ P+ + F+ +L CSH GL +G + F M+ Y I P E + CVVDL R G+
Sbjct: 404 VQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGR 463
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
+E A+ ++ M +P S+W A+LGAC Y ++LG LAA+ + D P + Y++LS I
Sbjct: 464 VEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYLLLSKI 523
Query: 547 YTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
Y A G W K RKLM+ + +K G S+++
Sbjct: 524 YAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIE 555
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 185/366 (50%), Gaps = 4/366 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFY-AKVGDVLSARKAFDR 90
T S+L+ C KA L H+ +G + ++++ ++ Y A + A F+
Sbjct: 111 TMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSVFND 170
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+P + VSWT +I+G+ G + LL F ML V N F++S A RACA + G
Sbjct: 171 IPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASISSYSCG 230
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ I ++ K + V +++LD+Y +C ++ DA F + K++++WN +I G +
Sbjct: 231 KQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGYE-R 289
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
+ +S LF M +G KP+CFT SI A L Q+H I++ G + + L
Sbjct: 290 SDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALI 349
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
SLID+YAK GSI +++L+ M D++S T ++ G+ + KEA LF +M+ +
Sbjct: 350 NSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGA-HGYGKEAVKLFDEMVQSGI 408
Query: 331 GIDDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
D ++ +L C++ ++ G + + Y + D + ++D+ ++G + +A
Sbjct: 409 QPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAF 468
Query: 390 RAFDEM 395
+ + M
Sbjct: 469 QLVENM 474
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 88/176 (50%), Gaps = 2/176 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ S+ C + +H I+ G++ N+ L +I YAK G + + K F M
Sbjct: 313 TFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDM 372
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG- 150
P R++VSWT M+ GY +GY + A+ +F M++SG++ ++ + L C+ + G
Sbjct: 373 PGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGL 432
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIG 205
+ + ++ + + ++DL + G +E+A+ L E + D W A++G
Sbjct: 433 KYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLG 488
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 187/543 (34%), Positives = 304/543 (55%), Gaps = 20/543 (3%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IH H I G +++L +ST ++ Y K + A F MP R++V+W AM++GYA +G
Sbjct: 32 IHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGM 91
Query: 112 DENAL--LVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSI----------QK 159
+A+ L+ M +R N T + L A+ L G + K
Sbjct: 92 YHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSK 151
Query: 160 GRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWL 219
+ + + + +ALLD+YAKCG + A +F+ + ++ V+W+A+IGG + +F L
Sbjct: 152 SKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLL 211
Query: 220 FRSMMRQGMKPDCF----TLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLID 275
F++M+ QG+ CF ++ S LRA L Q+H L+ K G+ + SL+
Sbjct: 212 FKAMLAQGL---CFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLS 268
Query: 276 VYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDV 335
+YAK G I A L+ M D +S +AL+SG+ ++ ++EAF +FK M + D
Sbjct: 269 MYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGR-AEEAFLVFKKMQACNVEPDAA 327
Query: 336 ILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEM 395
+ ++ C+++A+L GR H + + ++ NALIDMYAK G I + + F+ M
Sbjct: 328 TMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMM 387
Query: 396 GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGW 455
++++SW ++IAGY HG G EA L+ +M + G P+ VTF+ LL ACSH+GL EG
Sbjct: 388 PSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGK 447
Query: 456 ELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSI 515
F M + Y + PR EH+ C+VDL +R G L+ AY I+ M ++ +W A+LGAC +
Sbjct: 448 HWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRV 507
Query: 516 YGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYS 575
Y N LG+ +R + ++ PE + N+V+LSNIY+AAG +D A + R + + + +K+PG S
Sbjct: 508 YKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCS 567
Query: 576 FLQ 578
+++
Sbjct: 568 WIE 570
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 227/452 (50%), Gaps = 33/452 (7%)
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
MLR V N +T+ AL+AC+ + GR I +LFV +ALLD+Y KC
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ--GMKPDCFTLGSIL 239
+ DA +F + +D+V+WNAM+ G A G + SM Q ++P+ TL ++L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 240 RASVGGIELMKISQIHDLIIKLGLE----SSNKLTG------SLIDVYAKYGSIRSAYQL 289
L + + +H I+ L S +KLT +L+D+YAK GS+ A ++
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG-IDDVILCLMLNICANVA 348
+ +M + ++ +ALI GF + +AF LFK M+ + + + + L CA++
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMT-QAFLLFKAMLAQGLCFLSPTSIASALRACASLD 239
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA 408
L +G Q+HA K D GN+L+ MYAK+G I A FDEM K+ +S+++L++
Sbjct: 240 HLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVS 299
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT-----GLTCEGWELFTDMIN 463
GY ++G EA ++KKM+ + P+ T +SL+ ACSH G G + + +
Sbjct: 300 GYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLAS 359
Query: 464 KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGE 523
+ I + ++D++A+ G+++ + + M + S W+ ++ I+G LG+
Sbjct: 360 ETSIC------NALIDMYAKCGRIDLSRQVFNMMPSRDIVS-WNTMIAGYGIHG---LGK 409
Query: 524 LAARNLFDME----PEKSVNYVVLSNIYTAAG 551
A +M P V ++ L + + +G
Sbjct: 410 EATALFLEMNNLGFPPDGVTFICLLSACSHSG 441
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 138/281 (49%), Gaps = 2/281 (0%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L P++ S L+ C R +HA + +G ++L ++ YAK G + A
Sbjct: 222 FLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIA 281
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FD M ++ VS++A++SGY QNG E A LVF M V + T S + AC+ +
Sbjct: 282 LFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAA 341
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
LQ GR GS+ + +AL+D+YAKCG I+ + +F + +D+VSWN MI G
Sbjct: 342 LQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAG 401
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLES 265
+ G ++ LF M G PD T +L A S G+ + H + GL
Sbjct: 402 YGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTP 461
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALI 305
+ ++D+ ++ G + AY+ +SM L+ D+ AL+
Sbjct: 462 RMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALL 502
>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 695
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 200/562 (35%), Positives = 311/562 (55%), Gaps = 7/562 (1%)
Query: 28 LDPSTYMSL---LQFCIDKKAERQAHLIHAHIITNGYES-NLHLSTKVIIFYAKVGDVLS 83
LD +T + L LQ C R +HA ++ +G + + L+ +I Y+ DV S
Sbjct: 12 LDTATSLRLAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPS 71
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
A + FD MP N+VSWT ++SG QN +AL FS+M R+G+ QF SSA RA A
Sbjct: 72 AVRLFDAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAA 131
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
+ G + + F LFV S L D+Y+K G + +A +F+++ +KD V+W AM
Sbjct: 132 LAARHAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAM 191
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGM-KPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
I G A G + + FR M R+G+ D L S+L AS G + IH ++K G
Sbjct: 192 IDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSG 251
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYR-SMLKTDIISCTALISGFARDDNHSKEAFDL 321
E + +L D+YAK + +A ++ + +++S T+LI G+ D K A +
Sbjct: 252 FEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEK-ALLM 310
Query: 322 FKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
F ++ + + ++ M+ CA A L G Q+HA K D+ V + L+DMY K
Sbjct: 311 FIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGK 370
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
G I+ + + F E+ I+W + I A+HG+G EAI + +M G+ PN +TF+SL
Sbjct: 371 CGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSL 430
Query: 442 LFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
L ACSH GL EG + F M + + I P+ EH+SC++D++ R G+L+ A I +M +KP
Sbjct: 431 LTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKP 490
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRK 561
A W ++LGAC + GN LGE+AA N+ +EP+ + +V LS IY + G W++ + RK
Sbjct: 491 NAYGWCSLLGACRMRGNKELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVRK 550
Query: 562 LMEERSLRKNPGYSFLQSSKKN 583
LM + ++K PG+S++ S+KK
Sbjct: 551 LMRDNRIKKLPGFSWVDSNKKT 572
>gi|356521639|ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like [Glycine max]
Length = 699
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 188/574 (32%), Positives = 323/574 (56%), Gaps = 19/574 (3%)
Query: 21 LSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGD 80
LS T D + + + C + + + + H H + + S+ + T ++ YAK
Sbjct: 124 LSLHPTPHDYVLFSIVFKSCAESRDFQTLTITHCHFVKS-LPSDSFVLTCLVDAYAKFAR 182
Query: 81 VLSARKAFDRMPERN-VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALR 139
V A +AFD + E + VVSWT+MI Y QN L +F+ M + V N+FT S +
Sbjct: 183 VDEATRAFDEIHENDDVVSWTSMIVAYVQNDCAREGLTLFNRMREAFVDGNEFTVGSLVS 242
Query: 140 ACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER----K 195
AC ++ WL G+ + G + K N ++ ++LL++Y KCG I+DA +F+ +
Sbjct: 243 ACTKLNWLHQGKWVHGFVIKNGICVNSYLTTSLLNMYVKCGNIQDACKVFDESSSSSYDR 302
Query: 196 DVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQ 253
D+VSW AMI G + +G+ + LF+ G+ P+ T+ S+L A +G + K+
Sbjct: 303 DLVSWTAMIVGYSQRGYPHLALELFKDKKWSGILPNSVTVSSLLSSCAQLGNSVMGKL-- 360
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN 313
+H L +K GL+ + + +L+D+YAK G + A ++ +ML+ D++S ++ISGF +
Sbjct: 361 LHGLAVKCGLDD-HPVRNALVDMYAKCGVVSDARCVFEAMLEKDVVSWNSIISGFVQS-G 418
Query: 314 HSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK----YQSSYDA 369
+ EA +LF+ M L+ D V + +L+ CA++ L+LG +H A K S Y
Sbjct: 419 EAYEALNLFRRMGLELFSPDAVTVVGILSACASLGMLHLGCSVHGLALKDGLVVSSIY-- 476
Query: 370 AVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE 429
VG AL++ YAK G+ A FD MG+KN ++W ++I GY G G+ ++ L++ M E
Sbjct: 477 -VGTALLNFYAKCGDARAARMVFDSMGEKNAVTWGAMIGGYGMQGDGNGSLTLFRDMLEE 535
Query: 430 GMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLES 489
+ PN+V F ++L ACSH+G+ EG LF M + +P +H++C+VD+ AR G LE
Sbjct: 536 LVEPNEVVFTTILAACSHSGMVGEGSRLFNLMCGELNFVPSMKHYACMVDMLARAGNLEE 595
Query: 490 AYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTA 549
A + I +M ++P+ S++ A L C ++ LG A + + ++ P+++ YV++SN+Y +
Sbjct: 596 ALDFIERMPVQPSVSVFGAFLHGCGLHSRFELGGAAIKKMLELHPDEACYYVLVSNLYAS 655
Query: 550 AGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKN 583
G W ++ R+++++R L K PG S ++ +N
Sbjct: 656 DGRWGMVKQVREMIKQRGLNKVPGCSSVEMDLQN 689
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 147/528 (27%), Positives = 266/528 (50%), Gaps = 26/528 (4%)
Query: 30 PSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFD 89
P+ Y+S + C + + + +HA + +G ++L LSTK++ YA G + ARK F+
Sbjct: 35 PTFYLS--RLCTNLPSLKT---LHASFLIHGLTNDLLLSTKLLSLYASFGQLRHARKIFN 89
Query: 90 RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS--GVRANQFTYSSALRACARMRWL 147
+P R++ + MI Y N + ++ M S + +S ++CA R
Sbjct: 90 HLPTRDLYCFKVMIRAYFLNDTPSGVVSLYRLMRLSLHPTPHDYVLFSIVFKSCAESRDF 149
Query: 148 QGGRMIQGSIQKGRFVENL----FVKSALLDLYAKCGWIEDAWILFERI-ERKDVVSWNA 202
Q +I FV++L FV + L+D YAK +++A F+ I E DVVSW +
Sbjct: 150 Q-----TLTITHCHFVKSLPSDSFVLTCLVDAYAKFARVDEATRAFDEIHENDDVVSWTS 204
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
MI + LF M + + FT+GS++ A L + +H +IK G
Sbjct: 205 MIVAYVQNDCAREGLTLFNRMREAFVDGNEFTVGSLVSACTKLNWLHQGKWVHGFVIKNG 264
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLY----RSMLKTDIISCTALISGFARDDNHSKEA 318
+ ++ LT SL+++Y K G+I+ A +++ S D++S TA+I G+++ + A
Sbjct: 265 ICVNSYLTTSLLNMYVKCGNIQDACKVFDESSSSSYDRDLVSWTAMIVGYSQ-RGYPHLA 323
Query: 319 FDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDM 378
+LFKD + + V + +L+ CA + + +G+ +H A K D V NAL+DM
Sbjct: 324 LELFKDKKWSGILPNSVTVSSLLSSCAQLGNSVMGKLLHGLAVKCGLD-DHPVRNALVDM 382
Query: 379 YAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTF 438
YAK G ++DA F+ M +K+V+SW S+I+G+ + G +EA+ L+++M E P+ VT
Sbjct: 383 YAKCGVVSDARCVFEAMLEKDVVSWNSIISGFVQSGEAYEALNLFRRMGLELFSPDAVTV 442
Query: 439 LSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMN 498
+ +L AC+ G+ G + + ++ + +++ +A+ G +A + M
Sbjct: 443 VGILSACASLGMLHLGCSVHGLALKDGLVVSSIYVGTALLNFYAKCGDARAARMVFDSMG 502
Query: 499 IKPTASLWSAILGACSIYGNTSLGELAARNLFD--MEPEKSVNYVVLS 544
K A W A++G + G+ + R++ + +EP + V +L+
Sbjct: 503 EK-NAVTWGAMIGGYGMQGDGNGSLTLFRDMLEELVEPNEVVFTTILA 549
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 186/583 (31%), Positives = 314/583 (53%), Gaps = 44/583 (7%)
Query: 34 MSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVI---IFYAKVGDVLSARKAFDR 90
+SLL C K + +IHA +I G + + +K++ + + A FD
Sbjct: 6 LSLLHXC---KTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDT 62
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+ E ++ W M G+A + +AL ++ M+ G+ N +T+ L++CA+ + G
Sbjct: 63 IQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEG 122
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWI----------------------- 187
+ + G + K F +L++ ++L+ +Y + G +EDA
Sbjct: 123 QQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASR 182
Query: 188 --------LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
+F+ I KDVVSWNA I G A G ++ LF+ MM+ ++PD T+ ++L
Sbjct: 183 GXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVL 242
Query: 240 RASV--GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
A G IEL + Q+H I G + K+ +LID+Y+K G + +A L++ + D
Sbjct: 243 SACAQSGSIELGR--QVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKD 300
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
+IS LI G+ N KEA LF+DM+ +DV + +L+ CA++ ++++GR IH
Sbjct: 301 VISWNTLIGGYTHM-NLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIH 359
Query: 358 AFAFKYQSSYDAA--VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGY 415
+ K A + +LIDMYAK G+I A + FD M ++++ SW ++I G+A HG
Sbjct: 360 VYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGR 419
Query: 416 GHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFS 475
+ A +++ +M+ G+ P+D+TF+ LL ACSH+G+ G +F M Y+++P+ EH+
Sbjct: 420 ANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYG 479
Query: 476 CVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPE 535
C++DL G + A MI M ++P +W ++L AC ++GN LGE A+NL +EPE
Sbjct: 480 CMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPE 539
Query: 536 KSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+YV+LSNIY A W+ KTR L+ ++ ++K PG S ++
Sbjct: 540 NPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIE 582
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 145/468 (30%), Positives = 232/468 (49%), Gaps = 49/468 (10%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L + T+ LL+ C A ++ +H ++ G++ +L++ T +I Y + G + A+K
Sbjct: 100 LPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQK 159
Query: 87 AFDRMPERNVVSWTAMISGYAQNG--------YDE-----------------------NA 115
D+ R+VVS+TA+I+GYA G +DE A
Sbjct: 160 VXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEA 219
Query: 116 LLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDL 175
L +F M+++ VR ++ T + L ACA+ ++ GR + I F NL + +AL+DL
Sbjct: 220 LELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDL 279
Query: 176 YAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTL 235
Y+KCG +E A LF+ + KDV+SWN +IGG ++ LF+ M+R G KP+ T+
Sbjct: 280 YSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTM 339
Query: 236 GSILR--ASVGGIELMKISQIHDLIIKL--GLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
SIL A +G I++ + IH I K G+ +++ L SLID+YAK G I +A Q++
Sbjct: 340 LSILSACAHLGAIDIGR--WIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFD 397
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
SML + S A+I GFA + AFD+F M + DD+ +L+ C++ L+
Sbjct: 398 SMLNRSLSSWNAMIFGFAM-HGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLD 456
Query: 352 LGRQI-HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAG 409
LGR I + Y+ +ID+ SG +A + + M + + + W SL+
Sbjct: 457 LGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKA 516
Query: 410 YAKHGYGHEAIELYKK--MKHEGMVPNDVTFLSLLFACSHTGLTCEGW 455
HG E E Y + +K E P LS ++A T E W
Sbjct: 517 CKMHG-NVELGESYAQNLIKIEPENPGSYVLLSNIYA------TAERW 557
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 184/408 (45%), Gaps = 48/408 (11%)
Query: 9 KTGQLKQALKFSLSCPDTLLDP--STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+TG K+AL+ T + P ST +++L C + +H+ I +G+ NL
Sbjct: 212 ETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLK 271
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ +I Y+K G++ +A F + ++V+SW +I GY + ALL+F MLRSG
Sbjct: 272 IVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSG 331
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKG-RFVENL-FVKSALLDLYAKCGWIED 184
+ N T S L ACA + + GR I I K + V N ++++L+D+YAKCG IE
Sbjct: 332 EKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEA 391
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG 244
A +F+ + + + SWNAMI G AM G + +F +F M + G++PD T +L A
Sbjct: 392 AQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACS- 450
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
H ++ LG RS + Y+ M K + C
Sbjct: 451 ----------HSGMLDLGRH-----------------IFRSMTRDYKLMPKLEHYGCMID 483
Query: 305 ISGFARDDNHS---KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF 361
+ G HS KEA + M +M D VI C +L C ++ LG
Sbjct: 484 LXG------HSGLFKEAEKMINTM---EMEPDGVIWCSLLKACKMHGNVELGESYAQNLI 534
Query: 362 KYQSSYDAAVGNALIDMYAKS---GEIADANRAFDEMGDKNVISWTSL 406
K + + L ++YA + E+A ++ G K V +S+
Sbjct: 535 KIEPENPGSY-VLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSI 581
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 173/492 (35%), Positives = 284/492 (57%), Gaps = 10/492 (2%)
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
NV SW ++I+ A++G AL FS+M + ++ N+ T+ A+++C+ + L GR
Sbjct: 116 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 175
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND 214
F +LFV SAL+D+Y+KCG + DA LF+ I +++VSW +MI G
Sbjct: 176 QQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAH 235
Query: 215 DSFWLFRSMMRQG--------MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
+ LF+ + + + D + S+L A E +H +IK G E
Sbjct: 236 RALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGD 295
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ +L+D YAK G + + +++ M + D+IS ++I+ +A++ S E+ ++F M+
Sbjct: 296 LGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQN-GMSTESMEIFHRMV 354
Query: 327 LK-KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
++ + V L +L CA+ S LG+ IH K + VG ++IDMY K G++
Sbjct: 355 KDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKV 414
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A +AFD M +KNV SW++++AGY HG+ EA+E++ +M G+ PN +TF+S+L AC
Sbjct: 415 EMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAAC 474
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
SH GL EGW F M +++ + P EH+ C+VDL R G L+ A+++I+ M ++P +
Sbjct: 475 SHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVV 534
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
W A+LGAC ++ N LGE++AR LF+++P+ YV+LSNIY AG W++ + R LM+
Sbjct: 535 WGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKN 594
Query: 566 RSLRKNPGYSFL 577
L K PG+S +
Sbjct: 595 SGLVKPPGFSLV 606
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 204/377 (54%), Gaps = 25/377 (6%)
Query: 188 LFER-IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
LF + +++ +V SWN++I LA G + ++ F SM + +KP+ T +++ +
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 166
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
+L Q H + G E ++ +L+D+Y+K G +R A L+ + +I+S T++I+
Sbjct: 167 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 226
Query: 307 GFARDDNHSKEAFDLFKDMILKKMG--------IDDVILCLMLNICANVASLNLGRQIHA 358
G+ ++D+ + A LFK+ ++++ G +D + + +L+ C+ V+ ++ +H
Sbjct: 227 GYVQNDD-AHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHG 285
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHE 418
F K D V N L+D YAK GE+ + R FD M +++VISW S+IA YA++G E
Sbjct: 286 FLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTE 345
Query: 419 AIELYKKMKHEGMVP-NDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
++E++ +M +G + N VT ++L AC+H+G G + D + K + + +
Sbjct: 346 SMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLG-KCIHDQVIKMGLESNVFVGTSI 404
Query: 478 VDLFARRGQLE---SAYNMIRQMNIKPTASLWSAILGACSIYGNT--SLGELAARNLFDM 532
+D++ + G++E A++ +R+ N+K WSA++ ++G+ +L N+ +
Sbjct: 405 IDMYCKCGKVEMARKAFDRMREKNVKS----WSAMVAGYGMHGHAKEALEVFYEMNMAGV 460
Query: 533 EPEKSVNYVVLSNIYTA 549
+P NY+ ++ A
Sbjct: 461 KP----NYITFVSVLAA 473
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 214/423 (50%), Gaps = 24/423 (5%)
Query: 9 KTGQLKQALKFSLSCPDTLLDP--STYMSLLQFC---IDKKAERQAHLIHAHIITNGYES 63
++G +AL+ S L P ST+ ++ C +D + RQAH + G+E
Sbjct: 129 RSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH---QQALIFGFEP 185
Query: 64 NLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML 123
+L +S+ ++ Y+K G++ AR FD + RN+VSWT+MI+GY QN ALL+F L
Sbjct: 186 DLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFL 245
Query: 124 --RSG------VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDL 175
SG V + S L AC+R+ + G + K F +L V++ L+D
Sbjct: 246 VEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDA 305
Query: 176 YAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG-MKPDCFT 234
YAKCG + + +F+ + +DV+SWN++I A G + +S +F M++ G + + T
Sbjct: 306 YAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVT 365
Query: 235 LGSILRASV--GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRS 292
L ++L A G L K IHD +IK+GLES+ + S+ID+Y K G + A + +
Sbjct: 366 LSAVLLACAHSGSQRLGKC--IHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDR 423
Query: 293 MLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNL 352
M + ++ S +A+++G+ H+KEA ++F +M + + + + +L C++ L
Sbjct: 424 MREKNVKSWSAMVAGYGM-HGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEE 482
Query: 353 G-RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK-NVISWTSLIAGY 410
G A + ++ ++D+ ++G + +A M + + + W +L+
Sbjct: 483 GWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGAC 542
Query: 411 AKH 413
H
Sbjct: 543 RMH 545
>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
Length = 785
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 182/561 (32%), Positives = 302/561 (53%), Gaps = 13/561 (2%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D +Y + L C R +HA I +G S + +S ++ Y+K G++ AR+
Sbjct: 107 VDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRV 166
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR-- 145
FD ER+ VSW +++SGY + G E + VF+ M R G+ N F S ++ C+
Sbjct: 167 FDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDG 226
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
+ + G + K ++F+ SA++D+YAK G + +A LF ++ +VV +N MI
Sbjct: 227 TMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIA 286
Query: 206 GLAM------QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS--VGGIELMKISQIHDL 257
G + ++ L+ + +GM+P FT S+LRA G +E K QIH
Sbjct: 287 GFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGK--QIHGQ 344
Query: 258 IIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKE 317
+IK + + + +LID+Y G + ++ +RS K DI++ TA++SG +++ H K
Sbjct: 345 VIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEK- 403
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
A LF + + + D + ++N CA++A G QI FA K +GN+ +
Sbjct: 404 ALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVH 463
Query: 378 MYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVT 437
MYA+SG++ A R F EM +V+SW+++I+ +A+HG +A+ + +M +VPN++T
Sbjct: 464 MYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEIT 523
Query: 438 FLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
FL +L ACSH GL EG + M Y + P +H +CVVDL R G+L A I
Sbjct: 524 FLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNS 583
Query: 498 NIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNAR 557
+W ++L +C I+ + G+L A + ++EP S +YV+L N+Y AG A
Sbjct: 584 IFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLAS 643
Query: 558 KTRKLMEERSLRKNPGYSFLQ 578
KTR LM++R ++K PG S+++
Sbjct: 644 KTRDLMKQRGVKKEPGLSWIE 664
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/473 (28%), Positives = 244/473 (51%), Gaps = 31/473 (6%)
Query: 63 SNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAM 122
++L L ++ Y ++G L AR+ D MP RN VS+ +I Y++ G +L +
Sbjct: 41 ASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARA 100
Query: 123 LRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWI 182
R+GV ++F+Y++AL AC+R L+ GR + +FV ++L+ +Y+KCG +
Sbjct: 101 RRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEM 160
Query: 183 EDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS 242
+A +F+ E +D VSWN+++ G G ++ +F M R GM + F LGS+++
Sbjct: 161 GEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCC 220
Query: 243 VG-GIELMKISQ-IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
G G M I++ +H +IK GL+S L ++ID+YAK G++ A L+RS+ + +++
Sbjct: 221 SGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVM 280
Query: 301 CTALISGFARDDN-----HSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQ 355
+I+GF R + + EA L+ ++ + M + +L C L G+Q
Sbjct: 281 FNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQ 340
Query: 356 IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGY 415
IH KY D +G+ALID+Y SG + D R F ++++WT++++G ++
Sbjct: 341 IHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNEL 400
Query: 416 GHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL-----------TCEGWELFTDMINK 464
+A+ L+ + G+ P+ T S++ AC+ + T G++ FT M N
Sbjct: 401 HEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGN- 459
Query: 465 YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
SC V ++AR G +++A ++M S WSA++ + +G
Sbjct: 460 ----------SC-VHMYARSGDVDAATRRFQEMESHDVVS-WSAVISCHAQHG 500
>gi|449435950|ref|XP_004135757.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 606
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 177/512 (34%), Positives = 280/512 (54%), Gaps = 3/512 (0%)
Query: 68 STKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV 127
+T +I Y G A F+ +PER+VV+WTAMI G+ + A +FS MLRS V
Sbjct: 46 ATNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEV 105
Query: 128 RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYA-KCGWIEDAW 186
+ N FT SS L+AC M+ L G + K +++V++ALLD+YA C ++DA
Sbjct: 106 QPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDAL 165
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+F I K VSW +I G +G FR M+ + + P+ F+ RA
Sbjct: 166 SVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASIS 225
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
QIH + K GL + S++D+Y + + A + + + + ++I+ LI+
Sbjct: 226 SYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIA 285
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
G+ R D S E+ LF M + + + CAN+A L+ G+Q+H +
Sbjct: 286 GYERSD--SSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFD 343
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
+ A+ N+LIDMYAK G I+D+++ F +M ++++SWT+++ GY HGYG EA++L+ +M
Sbjct: 344 KNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEM 403
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
G+ P+ + F+ +L CSH GL +G + F M+ Y I P E + CVVDL R G+
Sbjct: 404 VQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGR 463
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
+E A+ ++ M +P S+W A+LGAC Y ++LG LAA+ + D P + Y++LS I
Sbjct: 464 VEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYLLLSKI 523
Query: 547 YTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
Y A G W K RKLM+ + +K G S+++
Sbjct: 524 YAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIE 555
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 185/366 (50%), Gaps = 4/366 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFY-AKVGDVLSARKAFDR 90
T S+L+ C KA L H+ +G + ++++ ++ Y A + A F+
Sbjct: 111 TMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSVFND 170
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+P + VSWT +I+G+ G + LL F ML V N F++S A RACA + G
Sbjct: 171 IPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASISSYSCG 230
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ I ++ K + V +++LD+Y +C ++ DA F + K++++WN +I G +
Sbjct: 231 KQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGYE-R 289
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
+ +S LF M +G KP+CFT SI A L Q+H I++ G + + L
Sbjct: 290 SDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALI 349
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
SLID+YAK GSI +++L+ M D++S T ++ G+ + KEA LF +M+ +
Sbjct: 350 NSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGA-HGYGKEAVKLFDEMVQSGI 408
Query: 331 GIDDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
D ++ +L C++ ++ G + + Y + D + ++D+ ++G + +A
Sbjct: 409 QPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAF 468
Query: 390 RAFDEM 395
+ + M
Sbjct: 469 QLVENM 474
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 88/176 (50%), Gaps = 2/176 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ S+ C + +H I+ G++ N+ L +I YAK G + + K F M
Sbjct: 313 TFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDM 372
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG- 150
P R++VSWT M+ GY +GY + A+ +F M++SG++ ++ + L C+ + G
Sbjct: 373 PGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGL 432
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIG 205
+ + ++ + + ++DL + G +E+A+ L E + D W A++G
Sbjct: 433 KYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLG 488
>gi|297746037|emb|CBI16093.3| unnamed protein product [Vitis vinifera]
Length = 702
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 198/601 (32%), Positives = 311/601 (51%), Gaps = 73/601 (12%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
S L FC + H ++ G S+ + T +I YAK G+V SA + +D+M
Sbjct: 118 SALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSL 177
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
+ + +IS YA+NG+ A VF + G R N +TYS+ L C + +Q G+ +
Sbjct: 178 DAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLH 237
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND 214
+ K +++ V +ALL LY+KCG +E+A I+FE + +++++SW A I G G
Sbjct: 238 AHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFENLGQRNIISWTASINGFYQHGDFK 297
Query: 215 DSFWLFRSMMRQGMKPDCFTLGSILRASVG-----------------GIELMKI------ 251
+ F M G++P+ FT SI+ AS G G LM I
Sbjct: 298 KALKQFSMMRESGIEPNEFTF-SIVLASCGCDLGKWMKQRTSSNRWGGQHLMSIFLLRKM 356
Query: 252 ---------------------------------SQIHDLIIKLGLESSNKLTGSLIDVYA 278
+H +I+K ES + +LI +Y+
Sbjct: 357 IEEGNKPTSLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYS 416
Query: 279 KYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILC 338
K G + A +++ + +++S LI+GF++ M+ + V +
Sbjct: 417 KCGHVEKACRVFDWI--PNVVSWNTLIAGFSQ--------------MLDQGFCPSSVTIS 460
Query: 339 LMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK 398
+L C NVA+L G++IH +A D V +AL+DMYAK G I++A F M ++
Sbjct: 461 SLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPER 520
Query: 399 NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELF 458
N ++W SLI GYA HGY +EAIEL+ +M+ + +TF ++L ACSH G+ G LF
Sbjct: 521 NTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLF 580
Query: 459 TDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
M KYRI PR EH++C+VDL R G+L AY++I+ M ++P +W A+LGAC +GN
Sbjct: 581 RKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGN 640
Query: 519 TSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
L E+AA +LF++EPE + ++LSN+Y AG W NA K +K+M++R K PG S+++
Sbjct: 641 IELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 700
Query: 579 S 579
+
Sbjct: 701 A 701
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 120/471 (25%), Positives = 213/471 (45%), Gaps = 75/471 (15%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNG 60
++ A + G QA + + + P+ TY ++L C A ++ +HAH++
Sbjct: 185 LISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQ 244
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
Y S + ++ Y+K G + A F+ + +RN++SWTA I+G+ Q+G + AL FS
Sbjct: 245 YLSETAVGNALLTLYSKCGMMEEAEIVFENLGQRNIISWTASINGFYQHGDFKKALKQFS 304
Query: 121 AMLRSGVRANQFTYSSALRACA--RMRWLQ--------GG----------RMIQ-----G 155
M SG+ N+FT+S L +C +W++ GG +MI+
Sbjct: 305 MMRESGIEPNEFTFSIVLASCGCDLGKWMKQRTSSNRWGGQHLMSIFLLRKMIEEGNKPT 364
Query: 156 SIQKGRFV-----------------ENL-------------FVKSALLDLYAKCGWIEDA 185
S++ +FV EN+ ++ SAL+ +Y+KCG +E A
Sbjct: 365 SLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKA 424
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGG 245
+F+ I +VVSWN +I G F M+ QG P T+ S+L A
Sbjct: 425 CRVFDWI--PNVVSWNTLIAG-------------FSQMLDQGFCPSSVTISSLLPACTNV 469
Query: 246 IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALI 305
L +IH + +G+E + +L+D+YAK G I A L+ M + + ++ +LI
Sbjct: 470 ANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLI 529
Query: 306 SGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI-HAFAFKYQ 364
G+A + + EA +LF M +D + +LN C++ + LG + KY+
Sbjct: 530 FGYA-NHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFRKMQEKYR 588
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHG 414
++D+ ++G++++A M + + W +L+ HG
Sbjct: 589 IEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHG 639
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 187/543 (34%), Positives = 304/543 (55%), Gaps = 20/543 (3%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IH H I G +++L +ST ++ Y K + A F MP R++V+W AM++GYA +G
Sbjct: 147 IHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGM 206
Query: 112 DENAL--LVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG----------SIQK 159
+A+ L+ M +R N T + L A+ L G + K
Sbjct: 207 YHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSK 266
Query: 160 GRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWL 219
+ + + + +ALLD+YAKCG + A +F+ + ++ V+W+A+IGG + +F L
Sbjct: 267 SKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLL 326
Query: 220 FRSMMRQGMKPDCF----TLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLID 275
F++M+ QG+ CF ++ S LRA L Q+H L+ K G+ + SL+
Sbjct: 327 FKAMLAQGL---CFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLS 383
Query: 276 VYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDV 335
+YAK G I A L+ M D +S +AL+SG+ ++ ++EAF +FK M + D
Sbjct: 384 MYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGR-AEEAFLVFKKMQACNVEPDAA 442
Query: 336 ILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEM 395
+ ++ C+++A+L GR H + + ++ NALIDMYAK G I + + F+ M
Sbjct: 443 TMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMM 502
Query: 396 GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGW 455
++++SW ++IAGY HG G EA L+ +M + G P+ VTF+ LL ACSH+GL EG
Sbjct: 503 PSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGK 562
Query: 456 ELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSI 515
F M + Y + PR EH+ C+VDL +R G L+ AY I+ M ++ +W A+LGAC +
Sbjct: 563 HWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRV 622
Query: 516 YGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYS 575
Y N LG+ +R + ++ PE + N+V+LSNIY+AAG +D A + R + + + +K+PG S
Sbjct: 623 YKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCS 682
Query: 576 FLQ 578
+++
Sbjct: 683 WIE 685
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 142/497 (28%), Positives = 249/497 (50%), Gaps = 35/497 (7%)
Query: 79 GDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENA--LLVFSAMLRSGVRANQFTYSS 136
G + A FD++P +V ++ +I Y+ + A L ++ MLR V N +T+
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130
Query: 137 ALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKD 196
AL+AC+ + GR I +LFV +ALLD+Y KC + DA +F + +D
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190
Query: 197 VVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ--GMKPDCFTLGSILRASVGGIELMKISQI 254
+V+WNAM+ G A G + SM Q ++P+ TL ++L L + + +
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250
Query: 255 HDLIIKLGLESS----NKLTG------SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
H I+ L S+ +KLT +L+D+YAK GS+ A +++ +M + ++ +AL
Sbjct: 251 HAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMG-IDDVILCLMLNICANVASLNLGRQIHAFAFKY 363
I GF + +AF LFK M+ + + + + L CA++ L +G Q+HA K
Sbjct: 311 IGGFVLCSRMT-QAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKS 369
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELY 423
D GN+L+ MYAK+G I A FDEM K+ +S+++L++GY ++G EA ++
Sbjct: 370 GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVF 429
Query: 424 KKMKHEGMVPNDVTFLSLLFACSH-----TGLTCEGWELFTDMINKYRILPRAEHFSCVV 478
KKM+ + P+ T +SL+ ACSH G G + + ++ I + ++
Sbjct: 430 KKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSIC------NALI 483
Query: 479 DLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDME----P 534
D++A+ G+++ + + M + S W+ ++ I+G LG+ A +M P
Sbjct: 484 DMYAKCGRIDLSRQVFNMMPSRDIVS-WNTMIAGYGIHG---LGKEATALFLEMNNLGFP 539
Query: 535 EKSVNYVVLSNIYTAAG 551
V ++ L + + +G
Sbjct: 540 PDGVTFICLLSACSHSG 556
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 138/281 (49%), Gaps = 2/281 (0%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L P++ S L+ C R +HA + +G ++L ++ YAK G + A
Sbjct: 337 FLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIA 396
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FD M ++ VS++A++SGY QNG E A LVF M V + T S + AC+ +
Sbjct: 397 LFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAA 456
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
LQ GR GS+ + +AL+D+YAKCG I+ + +F + +D+VSWN MI G
Sbjct: 457 LQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAG 516
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLES 265
+ G ++ LF M G PD T +L A S G+ + H + GL
Sbjct: 517 YGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTP 576
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALI 305
+ ++D+ ++ G + AY+ +SM L+ D+ AL+
Sbjct: 577 RMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALL 617
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 197/572 (34%), Positives = 311/572 (54%), Gaps = 29/572 (5%)
Query: 20 SLSCPDTLL-------DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVI 72
S+ C LL D T+ +L+ C+ + +H ++ G+E +++++ +I
Sbjct: 133 SMDCVTELLSLSGVRPDFYTFPPVLKACLSLADGEK---MHCWVLKMGFEHDVYVAASLI 189
Query: 73 IFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQF 132
Y++ G V A K F MP R+V SW AMISG+ QNG AL V M V+ +
Sbjct: 190 HLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTV 249
Query: 133 TYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI 192
T SS L CA+ + GG ++ + K ++FV +AL+++Y+K G ++DA +F+ +
Sbjct: 250 TVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGM 309
Query: 193 ERKDVVSWNAMIGGLAMQGFNDD---SFWLFRSMMRQGMKPDCFTLGSILRASVGGIELM 249
E +D+VSWN++I NDD + F+ M+ GM+PD T+ S L + G +
Sbjct: 310 EVRDLVSWNSIIAAYEQ---NDDPVTALGFFKEMLFVGMRPDLLTVVS-LASIFGQLSDR 365
Query: 250 KISQ-IHDLIIKLG-LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG 307
+I + +H +++ LE + +L+++YAK GSI A ++ + D+IS LI+G
Sbjct: 366 RIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITG 425
Query: 308 FARDDNHSKEAFDLFKDM-----ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK 362
+A++ + EA D + M I+ G +L ++V +L G +IH K
Sbjct: 426 YAQN-GLASEAIDAYNMMEEGRTIVPNQGT----WVSILPAYSHVGALQQGMKIHGRLIK 480
Query: 363 YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIEL 422
D V LIDMY K G + DA F E+ + + W ++I+ HG+G +A++L
Sbjct: 481 NCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQL 540
Query: 423 YKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFA 482
+K M+ +G+ + +TF+SLL ACSH+GL E F M +YRI P +H+ C+VDLF
Sbjct: 541 FKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFG 600
Query: 483 RRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVV 542
R G LE AYN++ M I+ AS+W +L AC I+GN LG A+ L +++ E YV+
Sbjct: 601 RAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYYVL 660
Query: 543 LSNIYTAAGAWDNARKTRKLMEERSLRKNPGY 574
LSNIY G W+ A K R L +R LRK PG+
Sbjct: 661 LSNIYANVGKWEGAVKVRSLARDRGLRKTPGW 692
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 151/528 (28%), Positives = 286/528 (54%), Gaps = 22/528 (4%)
Query: 49 AHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQ 108
A +HA ++ G ++ L T+++ YA +GD+ + F + +N+ SW +M+S Y +
Sbjct: 67 AKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYVR 126
Query: 109 NGYDENALLVFSAMLR-SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLF 167
G +++ + +L SGVR + +T+ L+AC L G + + K F +++
Sbjct: 127 RGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLS---LADGEKMHCWVLKMGFEHDVY 183
Query: 168 VKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
V ++L+ LY++ G +E A +F + +DV SWNAMI G G ++ + M +
Sbjct: 184 VAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEE 243
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
+K D T+ S+L +++ +H +IK GLES ++ +LI++Y+K+G ++ A
Sbjct: 244 VKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQ 303
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
+++ M D++S ++I+ + ++D+ A FK+M+ M D + + + +I +
Sbjct: 304 RVFDGMEVRDLVSWNSIIAAYEQNDD-PVTALGFFKEMLFVGMRPDLLTVVSLASIFGQL 362
Query: 348 ASLNLGRQIHAFAFKYQ-SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
+ +GR +H F + + D +GNAL++MYAK G I A F+++ ++VISW +L
Sbjct: 363 SDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTL 422
Query: 407 IAGYAKHGYGHEAIELYKKMKHEG--MVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK 464
I GYA++G EAI+ Y M+ EG +VPN T++S+L A SH G +G ++ +I
Sbjct: 423 ITGYAQNGLASEAIDAYNMME-EGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKN 481
Query: 465 YRILPRAEHF--SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLG 522
L + F +C++D++ + G+LE A ++ ++ + T+ W+AI+ + I+G+ G
Sbjct: 482 CLFL---DVFVATCLIDMYGKCGRLEDAMSLFYEIP-QETSVPWNAIISSLGIHGH---G 534
Query: 523 ELAARNLFDMEPE----KSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
E A + DM + + +V L + + +G D A+ M++
Sbjct: 535 EKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKE 582
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 88/185 (47%), Gaps = 13/185 (7%)
Query: 339 LMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK 398
L+ C N+ N+ +Q+HA + D + L+ +YA G+++ ++ F + K
Sbjct: 56 LVFRSCTNI---NVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRK 112
Query: 399 NVISWTSLIAGYAKHGYGHEAIELYKK-MKHEGMVPNDVTFLSLLFACSH--TGLTCEGW 455
N+ SW S+++ Y + G ++++ + + G+ P+ TF +L AC G W
Sbjct: 113 NIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLADGEKMHCW 172
Query: 456 ELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSI 515
L M ++ + A ++ L++R G +E A+ + M ++ S W+A++
Sbjct: 173 VL--KMGFEHDVYVAAS----LIHLYSRFGAVEVAHKVFVDMPVRDVGS-WNAMISGFCQ 225
Query: 516 YGNTS 520
GN +
Sbjct: 226 NGNVA 230
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 188/549 (34%), Positives = 308/549 (56%), Gaps = 8/549 (1%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNG-YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPE 93
+ +F K+ +R+ +HA++ +G ++ + + ++ Y K + +A F MP
Sbjct: 460 TFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPS 519
Query: 94 RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMI 153
++ VSW +MISG N E A+ F M R+G+ + F+ S L +C+ + WL GR I
Sbjct: 520 KDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQI 579
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA-MQGF 212
G K ++ V +ALL LYA+ I + +F ++ D VSWN+ IG LA +
Sbjct: 580 HGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEAS 639
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLGLESSNKLTG 271
+ F MM+ G +P+ T +IL A+V ++ + QIH LI+K + N +
Sbjct: 640 VLQALKYFLEMMQAGWRPNRVTFINIL-AAVSSFSVLGLGHQIHALILKYSVADDNAIEN 698
Query: 272 SLIDVYAKYGSIRSAYQLYRSML-KTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
+L+ Y K + ++ M + D +S ++ISG+ K A DL M+ +
Sbjct: 699 ALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHK-AMDLVWPMMQRGQ 757
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
+D +L+ CA+VA+L G ++HA A + D VG+AL+DMYAK G+I A+R
Sbjct: 758 KLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASR 817
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
F+ M +N+ SW S+I+GYA+HG+G +A++++ +MK G P+ VTF+ +L ACSH GL
Sbjct: 818 FFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGL 877
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
EG++ F M Y + PR EHFSC+VDL R G ++ + I+ M + P +W +L
Sbjct: 878 VDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVL 937
Query: 511 GACSIYG--NTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
GAC NT LG+ AA+ L ++EP+ +VNYV+LSN++ A G W++ + R M + ++
Sbjct: 938 GACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAV 997
Query: 569 RKNPGYSFL 577
+K+ G S++
Sbjct: 998 KKDAGCSWV 1006
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 139/491 (28%), Positives = 256/491 (52%), Gaps = 20/491 (4%)
Query: 49 AHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQ 108
A+ +H + G+ ++ +I Y ++G+++SARK FD MP++N+VSW+ +ISGY Q
Sbjct: 159 ANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQ 218
Query: 109 NGYDENALLVFSAMLRSGVRANQFTYSSALRACARM--RWLQGGRMIQGSIQKGRFVENL 166
N + A +F ++ SG+ N F SALRAC + ++ G I I K V ++
Sbjct: 219 NRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDM 278
Query: 167 FVKSALLDLYAKC-GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR 225
+ + L+ +Y+ C G I+DA +F+ I+ ++ V+WN++I +G +F LF M
Sbjct: 279 ILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQM 338
Query: 226 QG----MKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAK 279
+G ++P+ +TL S++ A S+ L+ + Q+ I K G + +L++ +A+
Sbjct: 339 EGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFAR 398
Query: 280 YGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCL 339
YG + A +++ M + ++ L+ G AR + +EA +FK+M + I+ L +
Sbjct: 399 YGLMDCAKMIFKQMYDRNAVTMNGLMVGLAR-QHQGEEAAKVFKEM-KDLVEINSESLVV 456
Query: 340 MLNICANVASLNLGR----QIHAFAFKYQSSYDA--AVGNALIDMYAKSGEIADANRAFD 393
+L+ ++L G+ ++HA+ F+ DA ++GNAL++MY K I +A F
Sbjct: 457 LLSTFTEFSNLKEGKRKGQEVHAYLFR-SGLVDARISIGNALVNMYGKCTAIDNACSVFQ 515
Query: 394 EMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCE 453
M K+ +SW S+I+G + EA+ + MK GMVP++ + +S L +CS G
Sbjct: 516 LMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTL 575
Query: 454 GWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGAC 513
G ++ + K+ + + ++ L+A + + QM S W++ +GA
Sbjct: 576 GRQIHGEGF-KWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVS-WNSFIGAL 633
Query: 514 SIYGNTSLGEL 524
+ Y + L L
Sbjct: 634 AKYEASVLQAL 644
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 154/326 (47%), Gaps = 13/326 (3%)
Query: 248 LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG 307
L + +H + K G +LI++Y + G++ SA +L+ M + +++S + LISG
Sbjct: 156 LYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISG 215
Query: 308 FARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS--LNLGRQIHAFAFKYQS 365
+ + + EA LFK +I + + + L C S + LG QIHAF K
Sbjct: 216 YTQ-NRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPC 274
Query: 366 SYDAAVGNALIDMYAK-SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
D + N L+ MY+ SG I DA+R FDE+ +N ++W S+I+ Y + G A +L+
Sbjct: 275 VSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFS 334
Query: 425 KMKHEG----MVPNDVTFLSLLF-ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD 479
M+ EG + PN+ T SL+ ACS E I K L S +V+
Sbjct: 335 VMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVN 394
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVN 539
FAR G ++ A + +QM + ++ ++G GE AA+ +M+ +N
Sbjct: 395 GFARYGLMDCAKMIFKQMYDRNAVTMNGLMVG----LARQHQGEEAAKVFKEMKDLVEIN 450
Query: 540 YVVLSNIYTAAGAWDNARKTRKLMEE 565
L + + + N ++ ++ +E
Sbjct: 451 SESLVVLLSTFTEFSNLKEGKRKGQE 476
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 67/123 (54%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD T+ ++L C + +HA + ES++ + + ++ YAK G + A +
Sbjct: 759 LDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRF 818
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F+ MP RN+ SW +MISGYA++G+ + AL +F+ M + G + T+ L AC+ + +
Sbjct: 819 FELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLV 878
Query: 148 QGG 150
G
Sbjct: 879 DEG 881
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 43/210 (20%)
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI 407
+SL +H +K + D N LI++Y + G + A + FDEM KN++SW+ LI
Sbjct: 154 SSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLI 213
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLT------------CEGW 455
+GY ++ EA L+K + G++PN S L AC G T C+
Sbjct: 214 SGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICK-L 272
Query: 456 ELFTDMI-----------------NKYRILPRAEH-----FSCVVDLFARRGQLESAYNM 493
+DMI + +R+ + ++ ++ ++ RRG SA+ +
Sbjct: 273 PCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKL 332
Query: 494 IR-------QMNIKPTA-SLWSAILGACSI 515
++N++P +L S + ACS+
Sbjct: 333 FSVMQMEGVELNLRPNEYTLCSLVTAACSL 362
>gi|297843162|ref|XP_002889462.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335304|gb|EFH65721.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 608
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 189/576 (32%), Positives = 320/576 (55%), Gaps = 10/576 (1%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K GQL A++ S + + Y SLLQ C + HAH++ +G E++ +
Sbjct: 37 KLGQLTDAIRILNSTHSSEISAKSNLYASLLQTCRKVFSFIHGLQFHAHVVKSGLETDRN 96
Query: 67 LSTKVIIFYAKVG-DVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
+ ++ Y K+G D+ R+ FD M ++ +SWT+M+SGY + AL VF M+
Sbjct: 97 VGNSLLSLYFKLGPDMRETRRVFDGMFVKDAISWTSMMSGYVASKEHVKALEVFVEMVSF 156
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
G++ N+FT SSA++AC + ++ GR G + F N + S L +Y DA
Sbjct: 157 GLQPNKFTLSSAVKACFELGEVRLGRCFHGVVITHGFEWNHVISSTLAYMYGVNKEPVDA 216
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR-QGMKPDCFTLGSILRASVG 244
+F+ + DV+ W A++ + +++ LF +M R +G+ PD T G++L A
Sbjct: 217 RRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGN 276
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
L + +IH +I G+ S+ + SL+D+Y K GS+R A Q++ M + +I+S +AL
Sbjct: 277 LRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKSGSVREARQVFNGMPRKNIVSWSAL 336
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
+ G+ ++ H K A ++F++M K D +L CA +A++ LG++IH +
Sbjct: 337 LGGYCQNGEHEK-AIEMFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRG 391
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
+ V +ALID+Y KSG I A+R + +M +N+I+W ++++ A++G G EA+ +
Sbjct: 392 CFGNVIVESALIDLYGKSGCIDYASRVYSKMSVRNMITWNAMLSALAQNGRGEEAVSFFN 451
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
M +G+ P+ ++F+++L AC HTGL EG F M Y I P EH+SC++DL R
Sbjct: 452 DMVKKGIKPDYISFIAVLTACGHTGLVEEGRNYFALMAKSYGIKPGTEHYSCMIDLLGRA 511
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGN-TSLGELAARNLFDMEPEKSVNYVVL 543
G E A N++ + + ASLW +LG C+ + +S+ E A+ + ++EP+ ++YV+L
Sbjct: 512 GLFEEAENLLDRAECRNDASLWGVLLGPCAANTDASSIAERIAKRMMELEPKYHMSYVLL 571
Query: 544 SNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQS 579
SN+Y A G +A K RKLM R + K G S++ +
Sbjct: 572 SNMYKAIGRHGDALKIRKLMVRRGVAKTVGQSWIDA 607
>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
Length = 913
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 182/542 (33%), Positives = 300/542 (55%), Gaps = 13/542 (2%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H + G+ S+ L +I YAK G++ A + F M +RNVVSWTA++ G+ Q+G
Sbjct: 239 LHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMRDRNVVSWTALMVGFLQHG- 297
Query: 112 DENALLVFSAMLRSGVRA--NQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK 169
D L +R+ A N++T S++L+AC + G I G + + E+ V
Sbjct: 298 DATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGVGIHGLCVRTGYEEHYVVA 357
Query: 170 SALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMM---- 224
S+L+ LY+K G I DA +F+ + + +WNAMI G A G D+ +FR M
Sbjct: 358 SSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHAGHGRDALLVFREMRRRRR 417
Query: 225 --RQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK--LTGSLIDVYAKY 280
+PD FT S+L+A G + +Q+H + G +++ L G+L+D+Y K
Sbjct: 418 RHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFSTASNAILAGALVDMYVKC 477
Query: 281 GSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLM 340
G + A Q++ + + + I T ++ G A++ EA +LF+ D +L +
Sbjct: 478 GRLPVAMQVFERLERKNAIQWTTVVVGHAQE-GQVMEALELFRRFWRSGARADAHVLSSI 536
Query: 341 LNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNV 400
+ + A+ A + GRQ+H + K + D + GN+++DMY K G +A R F E+ +NV
Sbjct: 537 VGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCGLPDEAERMFREIPARNV 596
Query: 401 ISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTD 460
+SWT++I G KHG G EA+ ++++M+ G+ P++VT+L+LL ACSH GL E F+
Sbjct: 597 VSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSC 656
Query: 461 MINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTS 520
+ + P+AEH++C+VDL R G+L A ++IR M ++PT +W +L AC ++ + +
Sbjct: 657 IRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVA 716
Query: 521 LGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSS 580
+G A L ++ + VNYV LSN++ AGAW K R M R L+K G S+++
Sbjct: 717 VGREAGDVLLAIDGDNPVNYVTLSNVFAEAGAWRECHKVRDAMRRRGLKKQGGCSWVEIG 776
Query: 581 KK 582
K+
Sbjct: 777 KE 778
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 208/439 (47%), Gaps = 28/439 (6%)
Query: 138 LRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDV 197
LRA A+ L+GG + G++ K F + + + L+D+YAKCG ++ A +F + ++V
Sbjct: 224 LRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMRDRNV 283
Query: 198 VSWNAMIGGLAMQGFNDDSFWLFRSMMRQG-MKPDCFTLGSILRASVGGIELMKISQIHD 256
VSW A++ G G L M P+ +TL + L+A ++ IH
Sbjct: 284 VSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGVGIHG 343
Query: 257 LIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR-SMLKTDIISCTALISGFARDDNHS 315
L ++ G E + SL+ +Y+K G I A +++ + L + + A+ISG+A H
Sbjct: 344 LCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAH-AGHG 402
Query: 316 KEAFDLFKDMIL------KKMGIDDVILCLMLNICANVASLNLGRQIHA--FAFKYQSSY 367
++A +F++M + D+ +L C + + G Q+HA A + ++
Sbjct: 403 RDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFSTAS 462
Query: 368 DAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMK 427
+A + AL+DMY K G + A + F+ + KN I WT+++ G+A+ G EA+EL+++
Sbjct: 463 NAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFRRFW 522
Query: 428 HEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSC---VVDLFARR 484
G + S++ + L +G ++ + P S +VD++ +
Sbjct: 523 RSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKS----PAGTDVSAGNSIVDMYLKC 578
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDM-----EPEKSVN 539
G + A M R++ + S W+ ++ +G LG A +M EP++ V
Sbjct: 579 GLPDEAERMFREIPARNVVS-WTTMINGLGKHG---LGREAVAMFEEMRAGGVEPDE-VT 633
Query: 540 YVVLSNIYTAAGAWDNARK 558
Y+ L + + AG D R+
Sbjct: 634 YLALLSACSHAGLVDECRR 652
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 130/268 (48%), Gaps = 3/268 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYE--SNLHLSTKVIIFYAKVGDVLSARK 86
D T+ SLL+ C A R+ +HA + +G+ SN L+ ++ Y K G + A +
Sbjct: 426 DEFTFASLLKACGGLGAPREGAQVHAAMAASGFSTASNAILAGALVDMYVKCGRLPVAMQ 485
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
F+R+ +N + WT ++ G+AQ G AL +F RSG RA+ SS + A
Sbjct: 486 VFERLERKNAIQWTTVVVGHAQEGQVMEALELFRRFWRSGARADAHVLSSIVGVLADFAL 545
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
++ GR + K ++ ++++D+Y KCG ++A +F I ++VVSW MI G
Sbjct: 546 VEQGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCGLPDEAERMFREIPARNVVSWTTMING 605
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIK-LGLES 265
L G ++ +F M G++PD T ++L A + + + I + +
Sbjct: 606 LGKHGLGREAVAMFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRP 665
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ ++D+ + G +R A L R+M
Sbjct: 666 KAEHYACMVDLLGRAGELREARDLIRTM 693
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 139/285 (48%), Gaps = 11/285 (3%)
Query: 235 LGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML 294
+ +LRAS G L Q+H + KLG S L +LID+YAK G + A +++ M
Sbjct: 220 IADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMR 279
Query: 295 KTDIISCTALISGFARDDNHSKEAFDLFKDM-ILKKMGIDDVILCLMLNICANVASLNLG 353
+++S TAL+ GF + + + L +M + ++ L L C + G
Sbjct: 280 DRNVVSWTALMVGFLQHGD-ATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAG 338
Query: 354 RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAK 412
IH + V ++L+ +Y+K G I DA R FD G + + +W ++I+GYA
Sbjct: 339 VGIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAH 398
Query: 413 HGYGHEAIELYKKM-----KHEGM-VPNDVTFLSLLFACSHTGLTCEGWELFTDM-INKY 465
G+G +A+ ++++M +HE P++ TF SLL AC G EG ++ M + +
Sbjct: 399 AGHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGF 458
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
A +VD++ + G+L A + ++ K A W+ ++
Sbjct: 459 STASNAILAGALVDMYVKCGRLPVAMQVFERLERK-NAIQWTTVV 502
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 8/209 (3%)
Query: 2 NIVRANFKTGQLKQAL----KFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHII 57
+V + + GQ+ +AL +F S D S++ D Q +H + +
Sbjct: 500 TVVVGHAQEGQVMEALELFRRFWRS--GARADAHVLSSIVGVLADFALVEQGRQVHCYGV 557
Query: 58 TNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALL 117
+ +++ ++ Y K G A + F +P RNVVSWT MI+G ++G A+
Sbjct: 558 KSPAGTDVSAGNSIVDMYLKCGLPDEAERMFREIPARNVVSWTTMINGLGKHGLGREAVA 617
Query: 118 VFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA-LLDLY 176
+F M GV ++ TY + L AC+ + R I++ R V A ++DL
Sbjct: 618 MFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLL 677
Query: 177 AKCGWIEDAWILFERIERKDVVS-WNAMI 204
+ G + +A L + + V W ++
Sbjct: 678 GRAGELREARDLIRTMPMEPTVGVWQTLL 706
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 176/543 (32%), Positives = 307/543 (56%), Gaps = 20/543 (3%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HA+ + G E N + ++ Y K+G + S++ R++V+W ++S QN
Sbjct: 220 VHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQ 278
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFVKS 170
AL M+ GV + FT SS L AC+ + L+ G+ + +++ G EN FV S
Sbjct: 279 FLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGS 338
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ-GMK 229
AL+D+Y C + +F+ + + + WNAMI G A +++++ LF M G+
Sbjct: 339 ALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLL 398
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
+ T+ ++ A V K IH ++K GL+ + +L+D+Y++ G I A ++
Sbjct: 399 ANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRI 458
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK----------MGIDDVILCL 339
+ M D+++ +I+G+ + H L K IL++ + + + L
Sbjct: 459 FGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMT 518
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN 399
+L CA +++L G++IHA+A K + D AVG+AL+DMYAK G + + + FD++ +N
Sbjct: 519 ILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRN 578
Query: 400 VISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFT 459
VI+W ++ Y HG +AI++ + M +G+ PN+VTF+S+ ACSH+G+ EG ++F
Sbjct: 579 VITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFY 638
Query: 460 DMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP----TASLWSAILGACSI 515
+M Y + P ++H++CVVDL R G+++ AY +I N+ P A WS++LGAC I
Sbjct: 639 NMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLI---NLIPRNFDKAGAWSSLLGACRI 695
Query: 516 YGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYS 575
+ N +GE+AA+NL +EP + +YV+L+NIY++AG W A + R+ M+ + +RK PG S
Sbjct: 696 HNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCS 755
Query: 576 FLQ 578
+++
Sbjct: 756 WIE 758
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 142/544 (26%), Positives = 268/544 (49%), Gaps = 35/544 (6%)
Query: 1 MNIVRANFKTGQLKQALKFSLSCPDTLL-----DPSTYMSLLQFCIDKKAERQAHLIHAH 55
++++R+ ++ L++A+ L+ D ++ D + +LL+ D + IHAH
Sbjct: 62 IDLLRSKVRSNLLREAV---LTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAH 118
Query: 56 IITNGYE-SNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDEN 114
+ GY ++ ++ ++ Y K GD + K FDR+ ERN VSW ++IS E
Sbjct: 119 VYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEM 178
Query: 115 ALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG---GRMIQG-SIQKGRFVENLFVKS 170
AL F ML V + FT S AC+ +G G+ + ++KG N F+ +
Sbjct: 179 ALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGEL--NSFIIN 236
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
L+ +Y K G + + +L E +D+V+WN ++ L ++ R M+ +G++P
Sbjct: 237 TLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEP 296
Query: 231 DCFTLGSILRASVGGIELMKIS-QIHDLIIKLGLESSNKLTGS-LIDVYAKYGSIRSAYQ 288
D FT+ S+L A +E+++ ++H +K G N GS L+D+Y + S +
Sbjct: 297 DGFTISSVLPA-CSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCR 355
Query: 289 LYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI--DDVILCLMLNICAN 346
++ M I A+I+G+A+++ + +EA LF +M + G+ + + ++ C
Sbjct: 356 VFDGMFDRKIGLWNAMITGYAQNE-YDEEALLLFIEM-EESAGLLANSTTMAGVVPACVR 413
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
+ + IH F K D V NAL+DMY++ G+I A R F +M D+++++W ++
Sbjct: 414 SGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTI 473
Query: 407 IAGYAKHGYGHEAIELYKKMK-----------HEGMVPNDVTFLSLLFACSHTGLTCEGW 455
I GY +A+ + KM+ + PN +T +++L +C+ +G
Sbjct: 474 ITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGK 533
Query: 456 ELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSI 515
E+ I K + S +VD++A+ G L+ + + Q+ I+ + W+ I+ A +
Sbjct: 534 EIHAYAI-KNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVIT-WNVIVMAYGM 591
Query: 516 YGNT 519
+GN+
Sbjct: 592 HGNS 595
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 142/275 (51%), Gaps = 12/275 (4%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L + +T ++ C+ A + IH ++ G + + + ++ Y+++G + A++
Sbjct: 398 LANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKR 457
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML-----------RSGVRANQFTYS 135
F +M +R++V+W +I+GY + E+ALL+ M R ++ N T
Sbjct: 458 IFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLM 517
Query: 136 SALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERK 195
+ L +CA + L G+ I K ++ V SAL+D+YAKCG ++ + +F++I +
Sbjct: 518 TILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIR 577
Query: 196 DVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQI 254
+V++WN ++ M G + D+ + R MM QG+KP+ T S+ A S G+ +
Sbjct: 578 NVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIF 637
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
+++ G+E S+ ++D+ + G ++ AYQL
Sbjct: 638 YNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQL 672
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 94/178 (52%), Gaps = 3/178 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T M++L C A + IHA+ I N +++ + + ++ YAK G + +RK FD++
Sbjct: 515 TLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQI 574
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P RNV++W ++ Y +G ++A+ + M+ GV+ N+ T+ S AC+ + G
Sbjct: 575 PIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGL 634
Query: 152 MIQGSIQKGRFVENLFVKSA-LLDLYAKCGWIEDAWILFERIERK--DVVSWNAMIGG 206
I +++K VE A ++DL + G +++A+ L I R +W++++G
Sbjct: 635 KIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGA 692
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 183/528 (34%), Positives = 299/528 (56%), Gaps = 5/528 (0%)
Query: 53 HAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYD 112
HA I ++ + + +I Y K+G +L ARK FD +PERN VSW +ISGYA
Sbjct: 136 HALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMA 195
Query: 113 ENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSAL 172
A +F M R ++F Y+S L A + G+ I K + V +AL
Sbjct: 196 FEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNAL 255
Query: 173 LDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDC 232
+ +Y KCG ++DA FE KD ++W+AMI G A G + ++ LF +M G KP
Sbjct: 256 VTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSE 315
Query: 233 FTLGSILRA--SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
FT ++ A +G +E K QIH +K G E +L+D+YAK GS+ A + +
Sbjct: 316 FTFVGVINACSDIGALEEGK--QIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGF 373
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
+ + DI+ T++ISG+A++ ++ A L+ M ++++ ++ + +L C+++A+L
Sbjct: 374 DYLKEPDIVLWTSMISGYAQN-GENETALTLYCRMQMERIMPHELTMASVLRACSSLAAL 432
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
G+QIHA KY S + +G+AL MYAK G + D N F M +++++W ++I+G
Sbjct: 433 EQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGL 492
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
+++G G +A+EL+++++H P+ VTF+++L ACSH GL G F M++++ I+PR
Sbjct: 493 SQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVPR 552
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
EH++C+VD+ +R G+L I I LW +LGAC Y N LG A L
Sbjct: 553 VEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLM 612
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
++ ++S Y++LS+IYTA G D+ + R+LM+ R + K PG S+++
Sbjct: 613 ELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIE 660
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 153/529 (28%), Positives = 267/529 (50%), Gaps = 13/529 (2%)
Query: 27 LLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
LL P +++ LL C +K ++ IHA ++ G S+++L+ ++ YAK G ++ A
Sbjct: 5 LLPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKA 64
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALL--VFSAMLRSGVRANQFTYSSALRACA 142
+ F+ + ++VVSW +I+GY+Q G + + +F M N T+S A +
Sbjct: 65 KLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAAS 124
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
GG K ++FV S+L+++Y K G + DA +F+ I ++ VSW
Sbjct: 125 SSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWAT 184
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
+I G AM+ +++ LF M R+ D F S+L A + QIH L +K G
Sbjct: 185 IISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNG 244
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
L S + +L+ +Y K G + A + + D I+ +A+I+G+A+ + S EA +LF
Sbjct: 245 LLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGD-SHEALNLF 303
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
+M L + ++N C+++ +L G+QIH ++ K AL+DMYAK
Sbjct: 304 YNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKC 363
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
G + DA + FD + + +++ WTS+I+GYA++G A+ LY +M+ E ++P+++T S+L
Sbjct: 364 GSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVL 423
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
ACS +G ++ I KY S + ++A+ G LE + R+M +
Sbjct: 424 RACSSLAALEQGKQIHAQTI-KYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDI 482
Query: 503 ASLWSAILGACSIYGNTSLGELAARNLFD--MEPEKSVNYVVLSNIYTA 549
+ W+A++ S G L A LF+ +YV N+ +A
Sbjct: 483 MT-WNAMISGLSQNGEG----LKALELFEELRHGTTKPDYVTFVNVLSA 526
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 142/263 (53%), Gaps = 3/263 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T++ ++ C D A + IH + + GYE ++ T ++ YAK G ++ ARK FD +
Sbjct: 317 TFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYL 376
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
E ++V WT+MISGYAQNG +E AL ++ M + ++ T +S LRAC+ + L+ G+
Sbjct: 377 KEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGK 436
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I K F + + SAL +YAKCG +ED ++F R+ +D+++WNAMI GL+ G
Sbjct: 437 QIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNG 496
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRAS--VGGIELMKISQIHDLIIKLGLESSNKL 269
+ LF + KPD T ++L A +G +E K+ ++ + G+ +
Sbjct: 497 EGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKV-YFRMMLDEFGIVPRVEH 555
Query: 270 TGSLIDVYAKYGSIRSAYQLYRS 292
++D+ ++ G + + S
Sbjct: 556 YACMVDILSRAGKLHETKEFIES 578
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 159/303 (52%), Gaps = 1/303 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IH + NG S + ++ Y K G + A K F+ +++ ++W+AMI+GYAQ G
Sbjct: 236 IHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGD 295
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
AL +F M +G + ++FT+ + AC+ + L+ G+ I G K + ++ +A
Sbjct: 296 SHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTA 355
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+D+YAKCG + DA F+ ++ D+V W +MI G A G N+ + L+ M + + P
Sbjct: 356 LVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPH 415
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
T+ S+LRA L + QIH IK G + +L +YAK GS+ ++R
Sbjct: 416 ELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFR 475
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
M DI++ A+ISG +++ K A +LF+++ D V +L+ C+++ +
Sbjct: 476 RMPSRDIMTWNAMISGLSQNGEGLK-ALELFEELRHGTTKPDYVTFVNVLSACSHMGLVE 534
Query: 352 LGR 354
G+
Sbjct: 535 RGK 537
>gi|242062998|ref|XP_002452788.1| hypothetical protein SORBIDRAFT_04g032540 [Sorghum bicolor]
gi|241932619|gb|EES05764.1| hypothetical protein SORBIDRAFT_04g032540 [Sorghum bicolor]
Length = 662
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 187/558 (33%), Positives = 295/558 (52%), Gaps = 6/558 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
D T+ + C D + R +H +T G+ + ++ ++ Y + DV+SA
Sbjct: 106 FDHLTFTFAAKACADLRRRRHGRAVHGRALTAGFGGDGYVQNALVSMYMRCRDVVSAEAV 165
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F + R VSW +I+G ++G E AL VF M+ GV ++ T S L ACA+ R L
Sbjct: 166 FGALRSRTTVSWNTVITGCVKDGRAERALEVFETMVGRGVCIDRATVVSVLPACAQARDL 225
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILF-ERIERKDVVSWNAMIGG 206
GR + VK+AL+D+Y KC +EDA +F E KDVVSW AMIG
Sbjct: 226 HMGRAVHRLAVVRGLGNYAAVKNALIDMYGKCRSLEDAKRVFDEDSYDKDVVSWTAMIGA 285
Query: 207 LAMQGFNDDSFWLFRSMM-RQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
+ +F L M+ +P+ T+ +L A + H L I+LGL S
Sbjct: 286 YVLNDHASKAFALGSEMLVTSEAQPNAVTMVHLLSACTSLLSGKHAKCTHALCIRLGLGS 345
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLY-RSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ +L+D YAK G + + + +T+ + A ISG+ + K+A LFK
Sbjct: 346 DTVVETALVDCYAKCGYMGMIDMVVEKGSRRTE--TWNAAISGYTHREQ-GKKALALFKQ 402
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M+ + + D + ++ A A L + IH + LI++YAK+G+
Sbjct: 403 MLAESVRPDSATMASVIPAYAESADLVQAKNIHCCLLIRGCLGSTDIATGLINVYAKAGD 462
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ A F + +K+V++WT++IAGY HG+ AI LY +M G+ PN VT SL+++
Sbjct: 463 LGVAWELFQCLPEKDVVAWTTVIAGYGMHGHAQTAILLYSRMIEMGVTPNTVTMASLMYS 522
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
CSH G+ EG LF DM + ++P AEH+ C+VD+ R G++E AY +I+ M +P+ S
Sbjct: 523 CSHAGMVDEGLRLFNDMRGVHGLMPNAEHYLCLVDMLGRAGRIEEAYRLIQDMPFEPSTS 582
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
+WSA+LGAC ++ N GE+AA++LF++EP+ NYV+L +Y AA W + + ++ME
Sbjct: 583 VWSALLGACVLHENVEFGEVAAKHLFELEPDNVGNYVLLGKVYAAADRWSDVQDLWRVME 642
Query: 565 ERSLRKNPGYSFLQSSKK 582
R L K+PG S + + +
Sbjct: 643 GRGLHKDPGSSVVDAKSE 660
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 198/422 (46%), Gaps = 16/422 (3%)
Query: 2 NIVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
++ K G+ ++AL+ ++ +D +T +S+L C + +H +
Sbjct: 179 TVITGCVKDGRAERALEVFETMVGRGVCIDRATVVSVLPACAQARDLHMGRAVHRLAVVR 238
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP-ERNVVSWTAMISGYAQNGYDENALLV 118
G + + +I Y K + A++ FD +++VVSWTAMI Y N + A +
Sbjct: 239 GLGNYAAVKNALIDMYGKCRSLEDAKRVFDEDSYDKDVVSWTAMIGAYVLNDHASKAFAL 298
Query: 119 FSAML-RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYA 177
S ML S + N T L AC + + + + + V++AL+D YA
Sbjct: 299 GSEMLVTSEAQPNAVTMVHLLSACTSLLSGKHAKCTHALCIRLGLGSDTVVETALVDCYA 358
Query: 178 KCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGS 237
KCG++ ++ E+ R+ +WNA I G + + LF+ M+ + ++PD T+ S
Sbjct: 359 KCGYMGMIDMVVEKGSRR-TETWNAAISGYTHREQGKKALALFKQMLAESVRPDSATMAS 417
Query: 238 ILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
++ A +L++ IH ++ G S + LI+VYAK G + A++L++ + + D
Sbjct: 418 VIPAYAESADLVQAKNIHCCLLIRGCLGSTDIATGLINVYAKAGDLGVAWELFQCLPEKD 477
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
+++ T +I+G+ H++ A L+ MI + + V + ++ C++ ++ G ++
Sbjct: 478 VVAWTTVIAGYGM-HGHAQTAILLYSRMIEMGVTPNTVTMASLMYSCSHAGMVDEGLRL- 535
Query: 358 AFAFKYQSSYDAAVGNA-----LIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYA 411
F + NA L+DM ++G I +A R +M + + W++L+
Sbjct: 536 ---FNDMRGVHGLMPNAEHYLCLVDMLGRAGRIEEAYRLIQDMPFEPSTSVWSALLGACV 592
Query: 412 KH 413
H
Sbjct: 593 LH 594
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 178/524 (33%), Positives = 292/524 (55%), Gaps = 3/524 (0%)
Query: 57 ITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENAL 116
+ G E N + + +I F K G + A++ FD MP ++VV W ++I GY Q G + A
Sbjct: 157 VEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAF 216
Query: 117 LVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLY 176
+F M SG++ + T +S ++AC + L+ G+ + G + ++ V ++ +D+Y
Sbjct: 217 QLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMY 276
Query: 177 AKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLG 236
+K G IE A +F ++ +++VSWNAMI G G +SF LF ++R D T+
Sbjct: 277 SKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIV 336
Query: 237 SILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT 296
S+L+ L +H I+ ES+ L+ +++D+Y+K GS++ A ++ M
Sbjct: 337 SLLQGCSQTASLATGKILHGCAIR-SFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDR 395
Query: 297 DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI 356
++I+ TA++ G A++ H+++A LF M + + + V +++ CA++ SL GR I
Sbjct: 396 NVITWTAMLVGLAQN-GHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSI 454
Query: 357 HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHGY 415
H F+ ++D AL+DMYAK G+I A R F K+V+ W S+I GY HG+
Sbjct: 455 HGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGH 514
Query: 416 GHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFS 475
G++A+ +Y KM EG+ PN TFLSLL ACSH+ L +G LF M + I P +H++
Sbjct: 515 GYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYA 574
Query: 476 CVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPE 535
C+VDL +R G+ E A +I +M +P ++ A+L C + N +LG + L ++
Sbjct: 575 CLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAM 634
Query: 536 KSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQS 579
Y++LSNIY A WD R LM R L+K PGYS +++
Sbjct: 635 NPGIYIMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVET 678
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 142/471 (30%), Positives = 259/471 (54%), Gaps = 13/471 (2%)
Query: 53 HAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYD 112
HA IITN ++ ++TK++ Y+ + + +AR FD+ + + AM+ GY Q+G
Sbjct: 52 HAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRY 111
Query: 113 ENALLVFSAMLRSGVRANQFTYSSALRACAR-MRWLQGGRMIQGSIQKGRFVENLFVKSA 171
L +F M + + + + AL+ACA + + G +I +++KG +N FV S+
Sbjct: 112 RETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKG-MEKNRFVGSS 170
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
++ K G I +A +F+ + KDVV WN++IGG G D +F LF M G+KP
Sbjct: 171 MISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPS 230
Query: 232 CFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
T+ S+++A GGI +K+ + +H ++ LGL + + S +D+Y+K G I SA ++
Sbjct: 231 PITMTSLIQA-CGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVF 289
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
M +++S A+ISG R + E+FDLF ++ G D + +L C+ ASL
Sbjct: 290 YKMPTRNLVSWNAMISGCVR-NGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASL 348
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
G+ +H A + S + + A++D+Y+K G + A F+ M D+NVI+WT+++ G
Sbjct: 349 ATGKILHGCAIRSFES-NLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGL 407
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMIN---KYRI 467
A++G+ +A+ L+ +M+ EG+ N VTF+SL+ +C+H G G + + + I
Sbjct: 408 AQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDI 467
Query: 468 LPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
+ + + +VD++A+ G++ A + +I LW++++ ++G+
Sbjct: 468 V----NMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGH 514
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 169/318 (53%), Gaps = 3/318 (0%)
Query: 30 PSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFD 89
P T SL+Q C + +H +++ G +++ + T + Y+K+GD+ SAR F
Sbjct: 231 PITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFY 290
Query: 90 RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG 149
+MP RN+VSW AMISG +NG + +F ++RS + T S L+ C++ L
Sbjct: 291 KMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLAT 350
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
G+++ G + F NL + +A++DLY+KCG ++ A +F R++ ++V++W AM+ GLA
Sbjct: 351 GKILHGCAIRS-FESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQ 409
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
G +D+ LF M +G+ + T S++ + L + IH + +LG
Sbjct: 410 NGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVN 469
Query: 270 TGSLIDVYAKYGSIRSAYQLY-RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+L+D+YAK G I A +++ + D++ ++I+G+ H +A ++ MI +
Sbjct: 470 MTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGM-HGHGYQAVGIYHKMIEE 528
Query: 329 KMGIDDVILCLMLNICAN 346
+ + +L+ C++
Sbjct: 529 GLKPNQTTFLSLLSACSH 546
>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
Length = 1029
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 180/567 (31%), Positives = 316/567 (55%), Gaps = 6/567 (1%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
D D T++S+L CI+ + +H I N +++L ++ ++ Y+K+G + A
Sbjct: 423 DLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVA 482
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
+ F +P ++ VSW A+I G A N +E A+ + M G+ ++ ++++A+ AC+ +
Sbjct: 483 KALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNI 542
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
R + G+ I + K N V S+L+DLY+K G +E + + ++ +V NA+I
Sbjct: 543 RATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALI 602
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
GL D++ LF+ +++ G KP FT SIL G + + Q+H +K L
Sbjct: 603 TGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALL 662
Query: 265 SSNKLTG-SLIDVYAKYGSIRSAYQLYRSML-KTDIISCTALISGFARDDNHSKEAFDLF 322
+ + G SL+ +Y K + A +L + +++ TA ISG+A++ +S ++ +F
Sbjct: 663 NQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQN-GYSDQSLVMF 721
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ-SSYDAAVGNALIDMYAK 381
M + D+ +L C+ +A+L G++IH K SY+ A +AL+DMY+K
Sbjct: 722 WRMRSHDVRSDEATFASVLKACSEIAALTDGKEIHGLIIKSGFVSYETA-ASALMDMYSK 780
Query: 382 SGEIADANRAFDEMGDK-NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
G++ + F E+ +K N++ W S+I G+AK+GY +EA+ L++KM+ + P++VT L
Sbjct: 781 CGDVISSFEIFKELKNKQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKPDEVTLLG 840
Query: 441 LLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIK 500
+L ACSH GL EG LF M Y I+PR +H++C++DL R G L+ A +I Q+ +
Sbjct: 841 VLIACSHAGLISEGRNLFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQEAQEVIDQLPFR 900
Query: 501 PTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTR 560
+W+ L AC ++ + G++AA+ L +MEP++S YV LS+++ AAG W A+ R
Sbjct: 901 ADGVIWATFLAACQMHKDEERGKVAAKKLVEMEPQRSSTYVFLSSLHAAAGNWVEAKVAR 960
Query: 561 KLMEERSLRKNPGYSFLQSSKKNILLL 587
+ M E+ + K PG S++ K L +
Sbjct: 961 EAMREKGVMKFPGCSWITVGNKTNLFV 987
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 147/495 (29%), Positives = 265/495 (53%), Gaps = 6/495 (1%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
ST+ S+L A + IHA + +G ++N+ + + +I Y K G + A+K FD
Sbjct: 328 STFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDF 387
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
E+N+V W AM+ G+ QN E + +F M R+ + A+ FT+ S L AC + L G
Sbjct: 388 STEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIG 447
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
R + K +LFV +A+LD+Y+K G I+ A LF I KD VSWNA+I GLA
Sbjct: 448 RQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHN 507
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
+++ ++ + M G+ PD + + + A QIH IK + S++ +
Sbjct: 508 EEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVG 567
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
SLID+Y+K+G + S+ ++ + + ++ ALI+G + +N EA +LF+ ++
Sbjct: 568 SSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQ-NNREDEAIELFQQVLKDGF 626
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ-SSYDAAVGNALIDMYAKSGEIADAN 389
+ +L+ C S +G+Q+H++ K + D ++G +L+ +Y K + DAN
Sbjct: 627 KPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDAN 686
Query: 390 RAFDEMGD-KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ E+ D KN++ WT+ I+GYA++GY +++ ++ +M+ + ++ TF S+L ACS
Sbjct: 687 KLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACSEI 746
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW-S 507
+G E+ +I K + S ++D++++ G + S++ + +++ K W S
Sbjct: 747 AALTDGKEIH-GLIIKSGFVSYETAASALMDMYSKCGDVISSFEIFKELKNKQNIMPWNS 805
Query: 508 AILG-ACSIYGNTSL 521
I+G A + Y N +L
Sbjct: 806 MIVGFAKNGYANEAL 820
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 133/476 (27%), Positives = 230/476 (48%), Gaps = 37/476 (7%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
+L C A Q +H ++ +G+ S+ ++ YAK +V AR+ FD + +
Sbjct: 166 VLSACSRLGALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPD 225
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG 155
+ W +MI+GY + G + AL +FS M + G +Q TY + + A M
Sbjct: 226 TICWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVTYVTIISTLASM----------- 274
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD 215
G + DA L +RI+ V+WNA+I + G +
Sbjct: 275 ------------------------GRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESE 310
Query: 216 SFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLID 275
F L++ M RQG+ P T S+L A+ + QIH +K GL+++ + SLI+
Sbjct: 311 VFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLIN 370
Query: 276 VYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDV 335
+Y K+G I A +++ + +I+ A++ GF ++D +E +F+ M + DD
Sbjct: 371 LYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQ-EETIQMFQYMRRADLEADDF 429
Query: 336 ILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEM 395
+L C N+ SL++GRQ+H K D V NA++DMY+K G I A F +
Sbjct: 430 TFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLI 489
Query: 396 GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGW 455
K+ +SW +LI G A + EA+ + K+MK G+ P++V+F + + ACS+ T G
Sbjct: 490 PGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGK 549
Query: 456 ELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
++ I KY + S ++DL+++ G +ES+ ++ ++ + + I G
Sbjct: 550 QIHCASI-KYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITG 604
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 220/426 (51%), Gaps = 5/426 (1%)
Query: 21 LSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGD 80
++CPDT+ + S++ +QA + + + G + +I A +G
Sbjct: 221 IACPDTI----CWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVTYVTIISTLASMGR 276
Query: 81 VLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRA 140
+ AR R+ + V+W A+IS Y+Q+G + ++ M R G+ + T++S L A
Sbjct: 277 LSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSA 336
Query: 141 CARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSW 200
A M G+ I + K N+FV S+L++LY K G I DA +F+ K++V W
Sbjct: 337 AASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMW 396
Query: 201 NAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIK 260
NAM+ G +++ +F+ M R ++ D FT S+L A + L Q+H + IK
Sbjct: 397 NAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIK 456
Query: 261 LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFD 320
+++ + +++D+Y+K G+I A L+ + D +S ALI G A ++ +EA
Sbjct: 457 NSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEE-EEAVY 515
Query: 321 LFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYA 380
+ K M + D+V +N C+N+ + G+QIH + KY + AVG++LID+Y+
Sbjct: 516 MLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYS 575
Query: 381 KSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
K G++ + + + +++ +LI G ++ EAIEL++++ +G P++ TF S
Sbjct: 576 KFGDVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFAS 635
Query: 441 LLFACS 446
+L C+
Sbjct: 636 ILSGCT 641
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 188/402 (46%), Gaps = 39/402 (9%)
Query: 47 RQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFD--RMPERNVVSWTAMIS 104
R ++HA ++ G L ++ Y + G V A +A + + ++++S
Sbjct: 73 RACGVLHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLS 132
Query: 105 GYAQNGYDENALLVFSAMLRS-GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFV 163
+A++G + L F + S G +QF + L AC+R+ L+ GR + + K F
Sbjct: 133 CHARSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFC 192
Query: 164 ENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM 223
+ F ++ L+D+YAKC ++DA +F+ I D + W +MI G G + LF M
Sbjct: 193 SSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRM 252
Query: 224 MRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
+ G PD T +I I A G +
Sbjct: 253 EKMGSAPDQVTYVTI-----------------------------------ISTLASMGRL 277
Query: 284 RSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNI 343
A L + + ++ A+IS +++ S E F L+KDM + + ML+
Sbjct: 278 SDARTLLKRIQMPSTVAWNAVISSYSQSGLES-EVFGLYKDMKRQGLMPTRSTFASMLSA 336
Query: 344 CANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISW 403
A++ + + G+QIHA A K+ + VG++LI++Y K G I+DA + FD +KN++ W
Sbjct: 337 AASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMW 396
Query: 404 TSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
+++ G+ ++ E I++++ M+ + +D TF+S+L AC
Sbjct: 397 NAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGAC 438
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 153/331 (46%), Gaps = 31/331 (9%)
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQ--------LYRSMLKTDIISCTALI 305
+H +++LGL +L +L+D+Y + G + A++ + ++SC A
Sbjct: 78 LHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSCHAR- 136
Query: 306 SGFARDDNHSKEAFDLFKDMILKKMGIDDVI-LCLMLNICANVASLNLGRQIHAFAFKYQ 364
SG RD D F+ + G D L ++L+ C+ + +L GRQ+H K
Sbjct: 137 SGSPRD------VLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSG 190
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
A L+DMYAK E+ DA R FD + + I W S+IAGY + G +A+ L+
Sbjct: 191 FCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFS 250
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
+M+ G P+ VT+++++ + G + L K +P ++ V+ +++
Sbjct: 251 RMEKMGSAPDQVTYVTIISTLASMGRLSDARTLL-----KRIQMPSTVAWNAVISSYSQS 305
Query: 485 GQLESA----YNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNY 540
G LES Y +++ + PT S ++++L A + T+ E + ++ N
Sbjct: 306 G-LESEVFGLYKDMKRQGLMPTRSTFASMLSAAA--SMTAFDEGQQIHAAAVKHGLDANV 362
Query: 541 VV---LSNIYTAAGAWDNARKTRKLMEERSL 568
V L N+Y G +A+K E+++
Sbjct: 363 FVGSSLINLYVKHGCISDAKKVFDFSTEKNI 393
>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Brachypodium distachyon]
Length = 1054
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 192/563 (34%), Positives = 314/563 (55%), Gaps = 16/563 (2%)
Query: 27 LLDPSTYMSLL----QFCIDKKAERQAHLIHAHIITNGY-ESNLHLSTKVIIFYAKVGDV 81
+++ T++ LL +F I + + +H HI+ G + + LS ++ YAK G +
Sbjct: 367 VVNTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAI 426
Query: 82 LSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC 141
A + F + R+ VSW +IS QNG+ E A++ + M + + + F S L +C
Sbjct: 427 DKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSC 486
Query: 142 ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN 201
A +R L G+ + K + V +AL+ +Y CG ++W +F + D+VSWN
Sbjct: 487 ASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWN 546
Query: 202 AMIGGL-AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA--SVGGIELMKISQIHDLI 258
+++G + + +S +F +MMR G+ P+ T ++L A + +EL K Q+H ++
Sbjct: 547 SIMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGK--QVHAVV 604
Query: 259 IKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML-KTDIISCTALISGFARDDNHSKE 317
+K G N + +L+ YAK G + S QL+ SM + D +S ++ISG+ + H +E
Sbjct: 605 LKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYN-GHLQE 663
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
D M+ +D ++LN CA+VA+L G ++HAF + Q D V +AL+D
Sbjct: 664 TMDCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQLESDVVVESALLD 723
Query: 378 MYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVT 437
MY+K G I A++ F+ M KN SW S+I+GYA+HG G +A+E++++M+ G P+ VT
Sbjct: 724 MYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVT 783
Query: 438 FLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
F+S+L ACSH GL G + F +M+ + ILP EH+SCV+DL R G+L I +M
Sbjct: 784 FVSVLSACSHAGLVDRGLDYF-EMMEDHGILPHIEHYSCVIDLLGRAGKLLKIQEYINRM 842
Query: 498 NIKPTASLWSAILGAC--SIYGN-TSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWD 554
+KP +W +L AC S G+ LG+ A+R L ++EP+ VNYV+ SN Y A G W+
Sbjct: 843 PMKPNTLIWRTVLVACRQSKDGDRIDLGKEASRMLLELEPQNPVNYVLASNFYAATGRWE 902
Query: 555 NARKTRKLMEERSLRKNPGYSFL 577
+ K R M +++K G S++
Sbjct: 903 DTAKARAAMGGAAMKKEAGQSWV 925
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 125/485 (25%), Positives = 232/485 (47%), Gaps = 19/485 (3%)
Query: 43 KKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAM 102
+ E +H ++ G +L LS ++ YAK + +AR+ FD M ERN VSWT +
Sbjct: 69 RGEEAAPERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCL 128
Query: 103 ISGYAQNGYDENALLVFSAMLRSG---VRANQFTYSSALRAC--ARMRWLQGGRMIQGSI 157
+SGY +G + A VF AML G R FT+ S LRAC A L + G +
Sbjct: 129 VSGYVLSGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLV 188
Query: 158 QKGRFVENLFVKSALLDLYAKC--GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD 215
K + N V +AL+ +Y C G A +F+ +D+++WNA++ A +G+
Sbjct: 189 SKTIYASNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVS 248
Query: 216 SFWLFRSMMRQG----MKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLT 270
+F LF +M+ ++P+ T GS++ A S+ + Q+ ++K G S +
Sbjct: 249 TFTLFMAMLHDDSAIELRPNEHTFGSLITATSLSSCSSGVLDQVFARVLKSGSSSDLYVG 308
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF---KDMIL 327
+L+ +A++G + A ++ ++ + + ++ LI G + + S+EA +F +D +
Sbjct: 309 SALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVK-QHCSEEAVGIFMGTRDSFV 367
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ-SSYDAAVGNALIDMYAKSGEIA 386
V+L + L GR++H + A+ N L++MYAK G I
Sbjct: 368 VNTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAID 427
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A+R F + ++ +SW ++I+ ++G+ A+ Y M+ + P++ +S L +C+
Sbjct: 428 KASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCA 487
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
L G ++ D + K+ + + +V ++ G ++ + M S W
Sbjct: 488 SLRLLTAGQQVHCDAV-KWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVS-W 545
Query: 507 SAILG 511
++I+G
Sbjct: 546 NSIMG 550
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 166/443 (37%), Positives = 270/443 (60%), Gaps = 4/443 (0%)
Query: 138 LRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDV 197
L+ C + L G++I + RF ++L +++ LL+LYAKCG + A LF+ + +DV
Sbjct: 22 LKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDV 81
Query: 198 VSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS--VGGIELMKISQIH 255
V+W A+I G + D+ L M+R G+KP+ FTL S+L+A+ VG ++++ Q+H
Sbjct: 82 VTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLH 141
Query: 256 DLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHS 315
L ++ G +S+ ++ +++D+YA+ + A ++ M+ + +S ALI+G+AR
Sbjct: 142 GLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGD 201
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNAL 375
K AF LF +M+ + + +L CA++ SL G+ +HA K+ A VGN L
Sbjct: 202 K-AFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTL 260
Query: 376 IDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND 435
+DMYAKSG I DA + FD + ++V+SW S++ GY++HG G A++ +++M + PND
Sbjct: 261 LDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPND 320
Query: 436 VTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIR 495
+TFL +L ACSH GL EG F DM+ KY + P+ H+ +VDL R G L+ A I
Sbjct: 321 ITFLCVLTACSHAGLLDEGRHYF-DMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFIS 379
Query: 496 QMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDN 555
+M IKPTA++W A+LGAC ++ N LG AA +F+++ +V+L NIY AG W++
Sbjct: 380 EMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWND 439
Query: 556 ARKTRKLMEERSLRKNPGYSFLQ 578
A K RK+M+E ++K P S+++
Sbjct: 440 AAKVRKMMKESGVKKEPACSWVE 462
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/396 (31%), Positives = 220/396 (55%), Gaps = 12/396 (3%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
+LL+ C + +IHA ++ + + +L + ++ YAK GD++ ARK FD M R
Sbjct: 20 TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM---RWLQGGR 151
+VV+WTA+I+GY+Q+ ++ALL+ MLR G++ NQFT +S L+A + + LQ GR
Sbjct: 80 DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQ-GR 138
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ G + + N++V A+LD+YA+C +E+A ++F+ + K+ VSWNA+I G A +G
Sbjct: 139 QLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKG 198
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
D +F LF +M+R+ +KP FT S+L A L + +H L+IK G + +
Sbjct: 199 QGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGN 258
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
+L+D+YAK GSI A +++ + K D++S ++++G+++ K A F++M+ ++
Sbjct: 259 TLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQ-HGLGKVALQRFEEMLRTRIA 317
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
+D+ +L C++ L+ GR KY + ++D+ ++G + A +
Sbjct: 318 PNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQF 377
Query: 392 FDEMGDKNVIS-WTSLIAGYAKH------GYGHEAI 420
EM K + W +L+ H GY E I
Sbjct: 378 ISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECI 413
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 132/267 (49%), Gaps = 40/267 (14%)
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN 399
+L C ++ LN G+ IHA + D + N L+++YAK G++ A + FDEM ++
Sbjct: 21 LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRD 80
Query: 400 VISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLT--CEGWEL 457
V++WT+LI GY++H +A+ L +M G+ PN T SLL A S G T +G +L
Sbjct: 81 VVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQL 140
Query: 458 ------------------FTDMINKYRILPRAE------------HFSCVVDLFARRGQL 487
DM + L A+ ++ ++ +AR+GQ
Sbjct: 141 HGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQG 200
Query: 488 ESAY----NMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYV-- 541
+ A+ NM+R+ N+KPT +S++L AC+ G+ G+ L EK V +V
Sbjct: 201 DKAFCLFSNMLRE-NVKPTHFTYSSVLCACASMGSLEQGKW-VHALMIKWGEKLVAFVGN 258
Query: 542 VLSNIYTAAGAWDNARKTRKLMEERSL 568
L ++Y +G+ ++A+K + +R +
Sbjct: 259 TLLDMYAKSGSIEDAKKVFDRLAKRDV 285
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 88/180 (48%), Gaps = 1/180 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
TY S+L C + Q +HA +I G + + ++ YAK G + A+K FDR+
Sbjct: 221 TYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRL 280
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
+R+VVSW +M++GY+Q+G + AL F MLR+ + N T+ L AC+ L GR
Sbjct: 281 AKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGR 340
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS-WNAMIGGLAMQ 210
++K + ++DL + G ++ A + K + W A++G M
Sbjct: 341 HYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMH 400
>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
Length = 785
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 182/561 (32%), Positives = 302/561 (53%), Gaps = 13/561 (2%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D +Y + L C R +HA I +G S + +S ++ Y+K G++ AR+
Sbjct: 107 VDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRV 166
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR-- 145
FD ER+ VSW +++SGY + G E + VF+ M R G+ N F S ++ C+
Sbjct: 167 FDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDG 226
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
+ + G + K ++F+ SA++D+YAK G + +A LF ++ +VV +N MI
Sbjct: 227 TMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIA 286
Query: 206 GLAM------QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS--VGGIELMKISQIHDL 257
G + ++ L+ + +GM+P FT S+LRA G +E K QIH
Sbjct: 287 GFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGK--QIHGQ 344
Query: 258 IIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKE 317
+IK + + + +LID+Y G + ++ +RS K DI++ TA++SG +++ H K
Sbjct: 345 VIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEK- 403
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
A LF + + + D + ++N CA++A G QI FA K +GN+ +
Sbjct: 404 ALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVH 463
Query: 378 MYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVT 437
MYA+SG++ A R F EM +V+SW+++I+ +A+HG +A+ + +M +VPN++T
Sbjct: 464 MYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEIT 523
Query: 438 FLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
FL +L ACSH GL EG + M Y + P +H +CVVDL R G+L A I
Sbjct: 524 FLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNG 583
Query: 498 NIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNAR 557
+W ++L +C I+ + G+L A + ++EP S +YV+L N+Y AG A
Sbjct: 584 IFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLAS 643
Query: 558 KTRKLMEERSLRKNPGYSFLQ 578
KTR LM++R ++K PG S+++
Sbjct: 644 KTRDLMKQRGVKKEPGLSWIE 664
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/473 (28%), Positives = 244/473 (51%), Gaps = 31/473 (6%)
Query: 63 SNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAM 122
++L L ++ Y ++G L AR+ D MP RN VS+ +I Y++ G +L +
Sbjct: 41 ASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARA 100
Query: 123 LRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWI 182
R+GV ++F+Y++AL AC+R L+ GR + +FV ++L+ +Y+KCG +
Sbjct: 101 RRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEM 160
Query: 183 EDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS 242
+A +F+ E +D VSWN+++ G G ++ +F M R GM + F LGS+++
Sbjct: 161 GEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCC 220
Query: 243 VG-GIELMKISQ-IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
G G M I++ +H +IK GL+S L ++ID+YAK G++ A L+RS+ + +++
Sbjct: 221 SGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVM 280
Query: 301 CTALISGFARDDN-----HSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQ 355
+I+GF R + + EA L+ ++ + M + +L C L G+Q
Sbjct: 281 FNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQ 340
Query: 356 IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGY 415
IH KY D +G+ALID+Y SG + D R F ++++WT++++G ++
Sbjct: 341 IHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNEL 400
Query: 416 GHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL-----------TCEGWELFTDMINK 464
+A+ L+ + G+ P+ T S++ AC+ + T G++ FT M N
Sbjct: 401 HEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGN- 459
Query: 465 YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
SC V ++AR G +++A ++M S WSA++ + +G
Sbjct: 460 ----------SC-VHMYARSGDVDAATRRFQEMESHDVVS-WSAVISCHAQHG 500
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 188/546 (34%), Positives = 301/546 (55%), Gaps = 8/546 (1%)
Query: 36 LLQFCIDKKAERQ--AHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPE 93
+LQ C K +Q AHL+ + + + L + ++ + LS D+ PE
Sbjct: 27 ILQQCKTPKDLQQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDK-PE 85
Query: 94 RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMI 153
+ ++ MI G A +NALL+F M V+ ++FT+SS L+AC+RM+ L+ G +
Sbjct: 86 SS--AYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQV 143
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN 213
I K F N FV++ L+ +YA CG I A +F+ + + +V+WN+M+ G G
Sbjct: 144 HALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLW 203
Query: 214 DDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKLTGS 272
D+ LFR ++ ++ D T+ S+L A G + ++I + I + I+ GL +N LT S
Sbjct: 204 DEVVKLFRKILELRIEFDDVTMISVLMA-CGRLANLEIGELIGEYIVSKGLRRNNTLTTS 262
Query: 273 LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI 332
LID+YAK G + +A +L+ M K D+++ +A+ISG+A+ D KEA +LF +M +
Sbjct: 263 LIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADR-CKEALNLFHEMQKGNVYP 321
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAF 392
++V + +L CA + + G+ +H + K + +G LID YAK G I + F
Sbjct: 322 NEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVF 381
Query: 393 DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTC 452
EM KNV +WT+LI G A +G G A+E + M + PNDVTF+ +L ACSH L
Sbjct: 382 KEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVD 441
Query: 453 EGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
+G LF M + I PR EH+ C+VD+ R G LE AY I M P A +W +L +
Sbjct: 442 QGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLAS 501
Query: 513 CSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNP 572
C + N + E + ++ +EP S +Y++LSN Y G ++A + R L++E+ ++K P
Sbjct: 502 CRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIP 561
Query: 573 GYSFLQ 578
G S ++
Sbjct: 562 GCSLIE 567
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 213/403 (52%), Gaps = 15/403 (3%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ S+L+ C KA R+ +HA I+ +G++SN + +I YA G + AR F
Sbjct: 120 DKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVF 179
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D MPER++V+W +M+SGY +NG + + +F +L + + T S L AC R+ L+
Sbjct: 180 DGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLE 239
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G +I I N + ++L+D+YAKCG ++ A LF+ ++++DVV+W+AMI G A
Sbjct: 240 IGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYA 299
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLESS 266
++ LF M + + P+ T+ S+L A +G E K +H I K ++ +
Sbjct: 300 QADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGK--WVHFYIKKKKMKLT 357
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
L LID YAK G I + ++++ M ++ + TALI G A ++ K A + F M+
Sbjct: 358 VTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLA-NNGEGKMALEFFSSML 416
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAF-AFKYQSSYDAAVGN--ALIDMYAKSG 383
+ +DV +L+ C++ ++ GR H F + + + + + ++D+ ++G
Sbjct: 417 ENDVKPNDVTFIGVLSACSHACLVDQGR--HLFNSMRRDFDIEPRIEHYGCMVDILGRAG 474
Query: 384 EIADANRAFDEMG-DKNVISWTSLIAGYAKHGYGHEAIELYKK 425
+ +A + D M N + W +L+A H+ IE+ +K
Sbjct: 475 FLEEAYQFIDNMPFPPNAVVWRTLLAS----CRAHKNIEMAEK 513
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 184/530 (34%), Positives = 290/530 (54%), Gaps = 38/530 (7%)
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
A F + E N +SW MI G+A + +AL ++ M+ G+ N +T+ ++CA+
Sbjct: 31 AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA------------------ 185
+ Q G+ I I K +L V ++L+ +YA+ G +EDA
Sbjct: 91 SKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAM 150
Query: 186 -------------WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDC 232
+F+ I KDVVSWNAMI G A G ++ LF MM+ +KPD
Sbjct: 151 ITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDE 210
Query: 233 FTLGSILRASV--GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
T+ ++L G +EL + QIH I G S+ KL +LID+Y+K G + A+ L+
Sbjct: 211 STMATVLSTCTHSGNVELGR--QIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLF 268
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
+ D+IS LI G+A NH KEA +F++M+ +DV + +L CA++ ++
Sbjct: 269 EGLQYKDVISWNTLIGGYAYI-NHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAI 327
Query: 351 NLGRQIHAFAFKYQSSY--DAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA 408
++GR IH + K + ++ +LIDMYAK G I AN+ FD + +K++ S ++I
Sbjct: 328 DIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIF 387
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
G+A HG A +L +MK +G+ P+D+TF+ LL ACSH GL+ G ++F M YRI
Sbjct: 388 GFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIE 447
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARN 528
P+ EH+ C++DL R G + A +I M ++P +W ++L AC I+ N LGEL A+
Sbjct: 448 PKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQK 507
Query: 529 LFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
L +EP+ +YV+LSNIY + WD+ + R L+ ++ L+K PG S ++
Sbjct: 508 LMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIE 557
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 152/465 (32%), Positives = 234/465 (50%), Gaps = 55/465 (11%)
Query: 28 LDPSTYMS--LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
L P++Y L + C KA ++ IHA I+ G +LH+ T +I YA+ G V A
Sbjct: 74 LSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAH 133
Query: 86 KAFDRMPERNVVSWTAMISGYAQNG--------YDE-----------------------N 114
K FD R+VVS+TAMI+GYA G +DE
Sbjct: 134 KVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKE 193
Query: 115 ALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLD 174
AL +F+ M++ V+ ++ T ++ L C ++ GR I I F NL + +AL+D
Sbjct: 194 ALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALID 253
Query: 175 LYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFT 234
LY+KCG +E A LFE ++ KDV+SWN +IGG A + ++ +F+ M++ G P+ T
Sbjct: 254 LYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVT 313
Query: 235 LGSILR--ASVGGIELMKISQIHDLIIK--LGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
+ SIL A +G I++ + IH I K G+ ++ L SLID+YAK G+I +A Q++
Sbjct: 314 MLSILPACAHLGAIDIGR--WIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVF 371
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI--DDVILCLMLNICANVA 348
++L + SC A+I GFA + AFDL M KK GI DD+ +L+ C++
Sbjct: 372 DTILNKSLSSCNAMIFGFAM-HGRADAAFDLLSRM--KKDGIEPDDITFVGLLSACSHAG 428
Query: 349 SLNLGRQI-HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSL 406
+LGR+I + Y+ +ID+ +SG +A + M + + + W SL
Sbjct: 429 LSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSL 488
Query: 407 IAGYAKHGYGHEAIEL-----YKKMKHEGMVPNDVTFLSLLFACS 446
+ K H+ +EL K MK E P LS ++A S
Sbjct: 489 L----KACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATS 529
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 135/288 (46%), Gaps = 37/288 (12%)
Query: 259 IKLGLESSNKLTGSLID---VYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHS 315
IK+GL ++N L+D + + + A +++S+ + + +S +I G A +
Sbjct: 1 IKIGLHNTNYALSKLLDFCILTPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSD-P 59
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNAL 375
A +L+ MI + + + CA + G+QIHA KY + D V +L
Sbjct: 60 ISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSL 119
Query: 376 IDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKH---------------------- 413
I MYA++G + DA++ FD ++V+S+T++I GYA
Sbjct: 120 ISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWN 179
Query: 414 ----GYGH-----EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK 464
GY EA+EL+ +M + P++ T ++L C+H+G G ++ + I+
Sbjct: 180 AMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHS-WIDN 238
Query: 465 YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
+ + + ++DL+++ G++E A+ + + K S W+ ++G
Sbjct: 239 HGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVIS-WNTLIGG 285
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 180/569 (31%), Positives = 310/569 (54%), Gaps = 7/569 (1%)
Query: 16 ALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFY 75
AL F + +P T+ S+L + A +HA + G S++ + ++ Y
Sbjct: 187 ALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMY 246
Query: 76 AKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYS 135
AK G V A+ F+ M R++VSW +++G N + AL +F + + Q TY+
Sbjct: 247 AKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYA 306
Query: 136 SALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE-R 194
+ ++ CA ++ L R + + K F V +AL D Y+KCG + DA +F
Sbjct: 307 TVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGS 366
Query: 195 KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQI 254
++VVSW A+I G G + LF M + P+ FT ++L+AS+ + QI
Sbjct: 367 RNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILP----PQI 422
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH 314
H +IK + + +L+ Y+K+GS A +++ + + D+++ +A++S A+ +
Sbjct: 423 HAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDC 482
Query: 315 SKEAFDLFKDMILKKMGIDDVILCLMLNICA-NVASLNLGRQIHAFAFKYQSSYDAAVGN 373
+ LF M ++ + ++ + +++ CA A ++ GRQ HA + KY+ V +
Sbjct: 483 EGATY-LFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSS 541
Query: 374 ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP 433
AL+ MY++ G I A F+ D++++SW S+I+GYA+HGY +AIE +++M+ G+
Sbjct: 542 ALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQM 601
Query: 434 NDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNM 493
+ VTFL+++ C+H GL EG + F M+ ++I P EH++C+VDL++R G+L+ ++
Sbjct: 602 DGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSL 661
Query: 494 IRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAW 553
IR M A +W +LGAC ++ N LG+ +A L +EP S YV+LSNIY AAG W
Sbjct: 662 IRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKW 721
Query: 554 DNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+ RKLM+ R ++K G S++Q K
Sbjct: 722 KERDEVRKLMDYRKVKKEAGCSWIQIKNK 750
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 130/495 (26%), Positives = 242/495 (48%), Gaps = 10/495 (2%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYE-SNLHLSTKVIIFYAKVGDVLSA 84
L+D +T +L+ C +H + G++ + T ++ Y K G V
Sbjct: 95 VLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEG 154
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
+ F+ MP++NVV+WT++++G A + +F M G+ N FT++S L A A
Sbjct: 155 IEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQ 214
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
L G+ + K ++FV ++L+++YAKCG +EDA +F +E +D+VSWN ++
Sbjct: 215 GALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLM 274
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
GL + ++ LF K T ++++ +L Q+H ++K G
Sbjct: 275 AGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFH 334
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT-DIISCTALISGFARDDNHSKEAFDLFK 323
+ + +L D Y+K G + A ++ + +++S TA+ISG ++ + A LF
Sbjct: 335 LTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGD-IPLAVVLFS 393
Query: 324 DMILKKMGIDDVILCLMLNICANVASLN-LGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
M ++ ++ ML ASL+ L QIHA K + +VG AL+ Y+K
Sbjct: 394 RMREDRVMPNEFTYSAMLK-----ASLSILPPQIHAQVIKTNYQHIPSVGTALLASYSKF 448
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
G DA F + K+V++W+++++ +A+ G A L+ KM +G+ PN+ T S++
Sbjct: 449 GSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVI 508
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
AC+ + F + KYR S +V +++R+G ++SA + + +
Sbjct: 509 DACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDL 568
Query: 503 ASLWSAILGACSIYG 517
S W++++ + +G
Sbjct: 569 VS-WNSMISGYAQHG 582
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 221/437 (50%), Gaps = 16/437 (3%)
Query: 80 DVLSARKAFDRMPERNV-VSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSAL 138
D AR D +P R+ V ++ YA+ G L FS R GV + T S L
Sbjct: 47 DPPGARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVL 106
Query: 139 RACARMR-WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDV 197
+AC + + G ++ ++ G + ++L+D+Y KCG + + +FE + +K+V
Sbjct: 107 KACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNV 166
Query: 198 VSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIH 255
V+W +++ G A + + LF M +G+ P+ FT S+L AS G ++L + ++H
Sbjct: 167 VTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQ--RVH 224
Query: 256 DLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHS 315
+K G SS + SL+++YAK G + A ++ M D++S L++G ++
Sbjct: 225 AQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECE- 283
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNAL 375
EA LF + + ++ +CAN+ L L RQ+H+ K+ V AL
Sbjct: 284 LEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTAL 343
Query: 376 IDMYAKSGEIADANRAFD-EMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
D Y+K GE+ADA F G +NV+SWT++I+G ++G A+ L+ +M+ + ++PN
Sbjct: 344 ADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPN 403
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDMI-NKYRILPRAEHFSCVVDLFARRGQLESAYNM 493
+ T+ ++L A L+ ++ +I Y+ +P + ++ +++ G E A ++
Sbjct: 404 EFTYSAMLKA----SLSILPPQIHAQVIKTNYQHIPSVG--TALLASYSKFGSTEDALSI 457
Query: 494 IRQMNIKPTASLWSAIL 510
+ + K + WSA+L
Sbjct: 458 FKMIEQKDVVA-WSAML 473
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 202/648 (31%), Positives = 346/648 (53%), Gaps = 75/648 (11%)
Query: 3 IVRANFKTGQLKQALKFSLSC----PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIIT 58
+VR + K G L +A+ +SC T D T L+ C + + +H I
Sbjct: 120 LVREHIKEGHLDRAI--GVSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICC 177
Query: 59 NGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER---NVVSWTAMISGYAQNGYDENA 115
NG+ESN+ + ++ Y++ G + A FD + + +V+SW ++++ + + A
Sbjct: 178 NGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTA 237
Query: 116 LLVFSAM------LRSGVRANQFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFV 168
L +FS M + R++ + + L ACA ++ L + I +I+ G F + FV
Sbjct: 238 LELFSEMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFAD-AFV 296
Query: 169 KSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM------------------------- 203
+AL+D YAKCG + DA +F +E KDVVSWNAM
Sbjct: 297 CNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENI 356
Query: 204 ----------IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ 253
I G A +G + ++ F+ M+ G +P+ T+ S+L A L + +
Sbjct: 357 PLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGME 416
Query: 254 IHDLIIKLGLESSNK------------LTGSLIDVYAKYGSIRSAYQLYRSMLKTD--II 299
IH +K L S + + +LID+Y+K S ++A ++ S+ + + ++
Sbjct: 417 IHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVV 476
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD---VILCLMLNICANVASLNLGRQI 356
+ T +I G+A+ + S +A +F +MI K + I C+++ CA++A+L +G+QI
Sbjct: 477 TWTVMIGGYAQYGD-SNDALKIFSEMISKPYAVAPNAYTISCILM-ACAHLAALRMGKQI 534
Query: 357 HAFAFKYQSSYDAAV---GNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKH 413
HA+ ++ Y+ +V N LIDMY+K G++ A FD M +N +SWTS+++GY H
Sbjct: 535 HAYVTRHHE-YEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMH 593
Query: 414 GYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEH 473
G G EA++++ KM+ G VP+D++FL LL+ACSH+G+ +G F M Y ++ AEH
Sbjct: 594 GRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEH 653
Query: 474 FSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDME 533
++CV+DL AR G+L+ A+ I++M ++P+A +W A+L AC ++ N L E A L +M+
Sbjct: 654 YACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMK 713
Query: 534 PEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSK 581
E +Y ++SNIY A W + + R+LM++ ++K PG S++Q K
Sbjct: 714 AENDGSYTLISNIYANARRWKDVARIRQLMKKSGIKKRPGCSWVQGKK 761
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 149/577 (25%), Positives = 268/577 (46%), Gaps = 82/577 (14%)
Query: 20 SLSCPDTLLDPSTYMSLLQFCIDKKAERQAH-----------------LIHAHIITNGYE 62
S C + P+ + SLL+ C RQ H + A + ++ Y
Sbjct: 21 SADCFGRDVSPTHFASLLKECRSVNTVRQIHQKIIACGLLSYPSSLLSVPLAPLPSHSYV 80
Query: 63 SNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAM 122
S L T V+ Y G A +R+ V W ++ + + G+ + A+ V M
Sbjct: 81 SPKSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRM 140
Query: 123 LRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWI 182
LR+G + + FT AL+AC + GR + G I F N+FV +AL+ +Y++CG +
Sbjct: 141 LRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSL 200
Query: 183 EDAWILFERIERK---DVVSWNAMIGG--------LAMQGFNDDSFWLFRSMMRQGMKPD 231
EDA ++F+ I RK DV+SWN+++ A++ F++ S + + + D
Sbjct: 201 EDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNE--RSD 258
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
++ +IL A L +I +IH I+ G + + +LID YAK GS+ A +++
Sbjct: 259 IISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFN 318
Query: 292 SMLKTDIISCTALISGFARDDNH----------------------------------SKE 317
M D++S A+++G+ + N S+E
Sbjct: 319 VMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQE 378
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK------------YQS 365
A D F+ MIL + V + +L+ CA++ +L+ G +IHA++ K
Sbjct: 379 ALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGD 438
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMG--DKNVISWTSLIAGYAKHGYGHEAIELY 423
D V NALIDMY+K A FD + ++NV++WT +I GYA++G ++A++++
Sbjct: 439 GEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIF 498
Query: 424 KKM--KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFS-CVVDL 480
+M K + PN T +L AC+H G ++ + + P + C++D+
Sbjct: 499 SEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDM 558
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
+++ G +++A N+ M + S W++++ ++G
Sbjct: 559 YSKCGDVDTARNVFDSMPKRNEVS-WTSMMSGYGMHG 594
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 185/583 (31%), Positives = 314/583 (53%), Gaps = 4/583 (0%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPSTY--MSLLQFCIDKKAERQAHLIHAHIITN 59
+I+ A+ G+ +AL + + +TY ++ LQ D + IH + +
Sbjct: 218 SIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKS 277
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
+ ++++++ +I YAK G + A + F M R+ VSW ++SG QN +AL F
Sbjct: 278 NHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYF 337
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
M S + +Q + + + A R L G+ + + N+ + + L+D+YAKC
Sbjct: 338 RDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKC 397
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
++ FE + KD++SW +I G A + ++ LFR + +GM D +GS+L
Sbjct: 398 CCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVL 457
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
RA G I +IH + K L + L ++++VY + G A + + S+ DI+
Sbjct: 458 RACSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIV 516
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
S T++I+ + EA +LF + + D + + L+ AN++SL G++IH F
Sbjct: 517 SWTSMITCCVHN-GLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGF 575
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
+ + + ++L+DMYA G + ++ + F + +++I WTS+I HG G+EA
Sbjct: 576 LIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEA 635
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD 479
I L+KKM E ++P+ +TFL+LL+ACSH+GL EG F M Y++ P EH++C+VD
Sbjct: 636 IALFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVD 695
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVN 539
L +R LE AY +R M IKP++ +W A+LGAC I+ N LGELAA+ L + + S
Sbjct: 696 LLSRSNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQSDTKNSGK 755
Query: 540 YVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
Y ++SNI+ A G W++ + R M+ L+KNPG S+++ K
Sbjct: 756 YALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNK 798
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 147/494 (29%), Positives = 264/494 (53%), Gaps = 10/494 (2%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D T+ S+L+ C R IH + G+ + + +I Y K GD+ AR
Sbjct: 143 IDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVL 202
Query: 88 FD--RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
FD M + + VSW ++IS + G AL +F M GV +N +T+ +AL+
Sbjct: 203 FDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPS 262
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
+++ G I G+ K +++V +AL+ +YAKCG +EDA +F + +D VSWN ++
Sbjct: 263 FVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLS 322
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
GL D+ FR M KPD ++ +++ AS L+ ++H I+ GL+S
Sbjct: 323 GLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDS 382
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ ++ +LID+YAK ++ + M + D+IS T +I+G+A+++ H EA +LF+ +
Sbjct: 383 NMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECH-LEAINLFRKV 441
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+K M +D +++ +L C+ + S N R+IH + FK + D + NA++++Y + G
Sbjct: 442 QVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLA-DIMLQNAIVNVYGEVGHR 500
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A RAF+ + K+++SWTS+I +G EA+EL+ +K + P+ + +S L A
Sbjct: 501 DYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSAT 560
Query: 446 SHTGLTCEGWELFTDMINKYRIL--PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
++ +G E+ +I K L P A S +VD++A G +E++ M + +
Sbjct: 561 ANLSSLKKGKEIHGFLIRKGFFLEGPIA---SSLVDMYACCGTVENSRKMFHSVKQRDLI 617
Query: 504 SLWSAILGACSIYG 517
LW++++ A ++G
Sbjct: 618 -LWTSMINANGMHG 630
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 146/484 (30%), Positives = 249/484 (51%), Gaps = 16/484 (3%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
LL C+ KA Q +HA ++ + + L+TK++ Y K G + A K FD M ER
Sbjct: 52 LLDLCVAVKALPQGQQLHARLLKSHLSA--FLATKLLHMYEKCGSLKDAVKVFDEMTERT 109
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG 155
+ +W AM+ + +G A+ ++ M GV + T+ S L+AC + + G I G
Sbjct: 110 IFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHG 169
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI--ERKDVVSWNAMIGGLAMQGFN 213
K F E +FV +AL+ +Y KCG + A +LF+ I E++D VSWN++I +G
Sbjct: 170 VAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKC 229
Query: 214 DDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKLTGS 272
++ LFR M G+ + +T + L+ V +K+ IH +K + + +
Sbjct: 230 LEALSLFRRMQEVGVASNTYTFVAALQG-VEDPSFVKLGMGIHGAALKSNHFADVYVANA 288
Query: 273 LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI 332
LI +YAK G + A +++ SML D +S L+SG +++ + ++A + F+DM
Sbjct: 289 LIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELY-RDALNYFRDMQNSAQKP 347
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAF 392
D V + ++ +L G+++HA+A + + +GN LIDMYAK + AF
Sbjct: 348 DQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAF 407
Query: 393 DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTC 452
+ M +K++ISWT++IAGYA++ EAI L++K++ +GM + + S+L ACS GL
Sbjct: 408 ECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACS--GLKS 465
Query: 453 EGWELFTDMINKY---RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
F I+ Y R L + +V+++ G + A + K S W+++
Sbjct: 466 RN---FIREIHGYVFKRDLADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVS-WTSM 521
Query: 510 LGAC 513
+ C
Sbjct: 522 ITCC 525
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 2/119 (1%)
Query: 339 LMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK 398
L+L++C V +L G+Q+HA K S A + L+ MY K G + DA + FDEM ++
Sbjct: 51 LLLDLCVAVKALPQGQQLHARLLK--SHLSAFLATKLLHMYEKCGSLKDAVKVFDEMTER 108
Query: 399 NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWEL 457
+ +W +++ + G EAIELYK+M+ G+ + TF S+L AC G + G E+
Sbjct: 109 TIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEI 167
>gi|225438700|ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
Length = 1008
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 179/553 (32%), Positives = 303/553 (54%), Gaps = 5/553 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D + +++L C +A HA ++SNL++S ++ FY+ G + S+ K F
Sbjct: 457 DAISIVNILSACSKLEAILLGKAAHAFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLF 516
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+MP RN +SW +ISG NG + A+ + M + + + T S + C L
Sbjct: 517 QKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVAENLI 576
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G + G K F ++ + +AL+ +Y CG I LFE + + +VSWNA+I G
Sbjct: 577 QGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYR 636
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
++ F M+R+G KP+ TL ++L + L++ IH ++ G+
Sbjct: 637 FHYLQNEVMASFCQMIREGQKPNYVTLLNLLPSCR---TLLQGKSIHAFAVRTGVIVETP 693
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ SLI +YA++ +I S L+ K DI A++S + + N +KE+ F +++
Sbjct: 694 IITSLISMYARFENINSFIFLFEMGGKEDIALWNAIMSVYVQTKN-AKESVTFFCELLHA 752
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
++ D + +++ C ++SLNL + A+ + + NALID++A+ G I+ A
Sbjct: 753 RVEPDYITFLSLISACVQLSSLNLSNSVMAYVIQKGFDKHIVISNALIDLFARCGNISIA 812
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ F+ + K+ +SW+++I GY HG A+ L +M+ GM P+ +T+ S+L ACSH
Sbjct: 813 KKIFEGLSSKDAVSWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGITYASVLSACSHG 872
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
G +GW +F M+ + + R EH++C+VDL R GQL AY+ + ++ KP+ SL +
Sbjct: 873 GFIDQGWMIFNSMVEE-GVPRRMEHYACMVDLLGRTGQLNEAYDFVEKLPCKPSVSLLES 931
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+LGAC I+GN LGE + LF+++P+ S +YV+L NIY AAG W +A + R MEER L
Sbjct: 932 LLGACIIHGNVKLGEKISSLLFELDPKNSGSYVMLYNIYAAAGRWMDANRVRSDMEERQL 991
Query: 569 RKNPGYSFLQSSK 581
RK PG+S ++ ++
Sbjct: 992 RKIPGFSLVEGNR 1004
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 128/444 (28%), Positives = 236/444 (53%), Gaps = 9/444 (2%)
Query: 21 LSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGD 80
L CP D T+ +++ C A A +H ++ +E NL + T ++ FYAK G
Sbjct: 149 LGCPS---DDFTFPFVIKACTALGAVWIAEGVHCIVLRTSFEENLVIQTALVDFYAKTGR 205
Query: 81 VLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRA 140
++ AR D++ + ++V+W A+ISGY+ NG+D+ V + G++ N T++S +
Sbjct: 206 MVKARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEVLRQINEMGLKPNVSTFASIIPL 265
Query: 141 CARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSW 200
C RM+ L G+ I G + K F + F+ AL+ +YA G + A LF+ K+VV W
Sbjct: 266 CTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIW 325
Query: 201 NAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIK 260
N+MI A + ++F +F+ M++ M+P+ T SI+ +H ++K
Sbjct: 326 NSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWYGKSLHAHVMK 385
Query: 261 LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFD 320
L+S + +L+ +YAK G + SA ++ M + +++S ++ISG+ + + + D
Sbjct: 386 YRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNLLSWNSMISGYGH-NGLWEASMD 444
Query: 321 LFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYA 380
F DM + D + + +L+ C+ + ++ LG+ HAF+F+ + + + NAL+ Y+
Sbjct: 445 AFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSFRKEFDSNLNISNALLAFYS 504
Query: 381 KSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
G+++ + + F +M +N ISW +LI+G +G +A+ L KM+ E M + VT +S
Sbjct: 505 DCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLIS 564
Query: 441 LLFACSHT-----GLTCEGWELFT 459
++ C G+T G+ + T
Sbjct: 565 IIPICRVAENLIQGMTLHGYAIKT 588
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 125/460 (27%), Positives = 235/460 (51%), Gaps = 20/460 (4%)
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
A AF+ + + +V MI +G E+ L V+ G ++ FT+ ++AC
Sbjct: 108 ALSAFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACTA 167
Query: 144 M--RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN 201
+ W+ G + + + F ENL +++AL+D YAK G + A ++ ++I + D+V+WN
Sbjct: 168 LGAVWIAEG--VHCIVLRTSFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWN 225
Query: 202 AMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKL 261
A+I G ++ GF+ + F + R + G+KP+ T SI+ L IH ++K
Sbjct: 226 ALISGYSLNGFDKEVFEVLRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKS 285
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDL 321
G S LT +LI +YA G++ A L+ S + +++ ++IS +A++ S EAF +
Sbjct: 286 GFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQK-SSEAFKM 344
Query: 322 FKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
F+ M+ M + V ++ C N A+ G+ +HA KY+ +V AL+ MYAK
Sbjct: 345 FQQMLKANMQPNVVTFVSIIPCCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAK 404
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
G++ A+ F +M +N++SW S+I+GY +G +++ + M+ EG P+ ++ +++
Sbjct: 405 LGDLNSADFIFYQMPRRNLLSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNI 464
Query: 442 LFACSH-----TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQ 496
L ACS G + + + I + ++ ++ G+L S++ + ++
Sbjct: 465 LSACSKLEAILLGKAAHAFSFRKEFDSNLNIS------NALLAFYSDCGKLSSSFKLFQK 518
Query: 497 MNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEK 536
M ++ S W+ ++ C G+T + A L M+ EK
Sbjct: 519 MPLRNAIS-WNTLISGCVHNGDT---KKAVALLHKMQQEK 554
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 141/519 (27%), Positives = 250/519 (48%), Gaps = 16/519 (3%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T++S++ C + +HAH++ +S L ++T ++ YAK+GD+ SA F +M
Sbjct: 359 TFVSIIPCCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQM 418
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P RN++SW +MISGY NG E ++ F M G + + + L AC+++ + G+
Sbjct: 419 PRRNLLSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGK 478
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ F NL + +ALL Y+ CG + ++ LF+++ ++ +SWN +I G G
Sbjct: 479 AAHAFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNG 538
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
+ L M ++ M+ D TL SI+ L++ +H IK G L
Sbjct: 539 DTKKAVALLHKMQQEKMELDLVTLISIIPICRVAENLIQGMTLHGYAIKTGFACDVSLVN 598
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
+LI +Y G I + L+ M I+S ALI+G+ R E F MI +
Sbjct: 599 ALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGY-RFHYLQNEVMASFCQMIREGQK 657
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
+ V L LN+ + +L G+ IHAFA + + + +LI MYA+ I
Sbjct: 658 PNYVTL---LNLLPSCRTLLQGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFL 714
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLT 451
F+ G +++ W ++++ Y + E++ + ++ H + P+ +TFLSL+ AC
Sbjct: 715 FEMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSL 774
Query: 452 CEGWELFTDMI----NKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
+ +I +K+ ++ A ++DLFAR G + A + ++ K S WS
Sbjct: 775 NLSNSVMAYVIQKGFDKHIVISNA-----LIDLFARCGNISIAKKIFEGLSSKDAVS-WS 828
Query: 508 AILGACSIYGNT--SLGELAARNLFDMEPEKSVNYVVLS 544
++ ++G++ +L L+ L M+P+ VLS
Sbjct: 829 TMINGYGLHGDSEAALALLSQMRLSGMKPDGITYASVLS 867
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 185/394 (46%), Gaps = 17/394 (4%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD T +S++ C + Q +H + I G+ ++ L +I Y GD+ + +
Sbjct: 557 LDLVTLISIIPICRVAENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFL 616
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F+ MP R++VSW A+I+GY + + F M+R G + N T + L +C + L
Sbjct: 617 FEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIREGQKPNYVTLLNLLPSCRTL--L 674
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
QG + +++ G VE + S L+ +YA+ I LFE ++D+ WNA++
Sbjct: 675 QGKSIHAFAVRTGVIVETPIITS-LISMYARFENINSFIFLFEMGGKEDIALWNAIMSVY 733
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
+S F ++ ++PD T S++ A V L + + +I+ G +
Sbjct: 734 VQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNSVMAYVIQKGFDKHI 793
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
++ +LID++A+ G+I A +++ + D +S + +I+G+ + S+ A L M L
Sbjct: 794 VISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMINGYGLHGD-SEAALALLSQMRL 852
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN------ALIDMYAK 381
M D + +L+ C++ ++ G I + S + V ++D+ +
Sbjct: 853 SGMKPDGITYASVLSACSHGGFIDQGWMI------FNSMVEEGVPRRMEHYACMVDLLGR 906
Query: 382 SGEIADANRAFDEMGDKNVIS-WTSLIAGYAKHG 414
+G++ +A +++ K +S SL+ HG
Sbjct: 907 TGQLNEAYDFVEKLPCKPSVSLLESLLGACIIHG 940
>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
gi|194688780|gb|ACF78474.1| unknown [Zea mays]
gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
Length = 695
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 181/538 (33%), Positives = 297/538 (55%), Gaps = 9/538 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H I G+ S+ L +I Y K G++ A + F M +RNVVSWTA++ G+ ++G
Sbjct: 26 LHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHG- 84
Query: 112 DENALLVFSAMLRSGVRA--NQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK 169
D L +R+ A N++T S++L+AC + G I G + + E+ V
Sbjct: 85 DATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVA 144
Query: 170 SALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ-- 226
S+L+ +Y+K G I DA +F+ + +WNAM+ G A G D+ +FR M R
Sbjct: 145 SSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEG 204
Query: 227 GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK--LTGSLIDVYAKYGSIR 284
+PD FT S+L+A G + +Q+H + G +++ L G+L+D+Y K +
Sbjct: 205 QHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLP 264
Query: 285 SAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNIC 344
A Q++ + + ++I TA++ G A++ EA +LF+ D +L ++ +
Sbjct: 265 VAMQVFERLERKNVIQWTAVVVGHAQE-GQVTEALELFRRFWRSGARPDSHVLSSVVGVL 323
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWT 404
A+ A + GRQ+H + K + D + GN+++DMY K G +A R F EM NV+SWT
Sbjct: 324 ADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWT 383
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK 464
+++ G KHG G EA+ L+++M+ G+ P++VT+L+LL ACSH GL E F+ +
Sbjct: 384 TMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRD 443
Query: 465 YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGEL 524
+ P+AEH++C+VDL R G+L A ++IR M ++PT +W +L AC ++ + ++G
Sbjct: 444 RTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGRE 503
Query: 525 AARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
A L M+ + VNYV LSN+ AG W K R M R L+K G S+++ K+
Sbjct: 504 AGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHKVRDAMRRRGLKKQGGCSWVEVGKE 561
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 210/436 (48%), Gaps = 26/436 (5%)
Query: 138 LRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDV 197
LRA AR L+GG + G+I K F + + + L+D+Y KCG ++ A +F + ++V
Sbjct: 11 LRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMRDRNV 70
Query: 198 VSWNAMIGGLAMQGFNDDSFWLFRSMMRQG-MKPDCFTLGSILRASVGGIELMKISQIHD 256
VSW A++ G G L M P+ +TL + L+A + IH
Sbjct: 71 VSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVGIHG 130
Query: 257 LIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALISGFARDDNHS 315
L ++ G + + + SL+ VY+K G I A +++ L + I + A++SG+A H
Sbjct: 131 LCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAH-AGHG 189
Query: 316 KEAFDLFKDMILK--KMGIDDVILCLMLNICANVASLNLGRQIHA--FAFKYQSSYDAAV 371
++A +F++M + D+ +L C+ + + G Q+HA A + ++ +A +
Sbjct: 190 RDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAIL 249
Query: 372 GNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGM 431
AL+DMY K + A + F+ + KNVI WT+++ G+A+ G EA+EL+++ G
Sbjct: 250 AGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGA 309
Query: 432 VPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSC---VVDLFARRGQLE 488
P+ S++ + L +G ++ I P S +VD++ + G +
Sbjct: 310 RPDSHVLSSVVGVLADFALVEQGRQVHCYGIKD----PTGTDVSAGNSIVDMYLKCGLPD 365
Query: 489 SAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD------MEPEKSVNYVV 542
A M R+M P W+ ++ +G LG A LF+ +EP++ V Y+
Sbjct: 366 EAERMFREMR-APNVVSWTTMVNGLGKHG---LGREAV-ALFEEMRAGGVEPDE-VTYLA 419
Query: 543 LSNIYTAAGAWDNARK 558
L + + AG D R+
Sbjct: 420 LLSACSHAGLVDECRR 435
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 149/328 (45%), Gaps = 46/328 (14%)
Query: 223 MMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGS 282
M RQ M + +LRAS L Q+H I K+G S L +LID+Y K G
Sbjct: 1 MERQKM------IAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGE 54
Query: 283 IRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM-ILKKMGIDDVILCLML 341
+ A +++ M +++S TAL+ GF R + + L +M + ++ L L
Sbjct: 55 LDLACEVFGGMRDRNVVSWTALMVGFLRHGD-ATGCLRLLGEMRTASEAAPNEYTLSASL 113
Query: 342 NICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNV 400
C V G IH + V ++L+ +Y+K G I DA R FD G +
Sbjct: 114 KACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGI 173
Query: 401 ISWTSLIAGYAKHGYGHEAIELYKKM-KHEGM-VPNDVTFLSLLFACSHTGLTCEGWEL- 457
+W ++++GYA G+G +A+ ++++M +HEG P++ TF SLL ACS G T EG ++
Sbjct: 174 ATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVH 233
Query: 458 -------------------FTDMINKYRILPRAE------------HFSCVVDLFARRGQ 486
DM K R LP A ++ VV A+ GQ
Sbjct: 234 AAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQ 293
Query: 487 LESAYNMIRQM---NIKPTASLWSAILG 511
+ A + R+ +P + + S+++G
Sbjct: 294 VTEALELFRRFWRSGARPDSHVLSSVVG 321
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 129/268 (48%), Gaps = 3/268 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYE--SNLHLSTKVIIFYAKVGDVLSARK 86
D T+ SLL+ C A R+ +HA + +G+ SN L+ ++ Y K + A +
Sbjct: 209 DEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQ 268
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
F+R+ +NV+ WTA++ G+AQ G AL +F RSG R + SS + A
Sbjct: 269 VFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFAL 328
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
++ GR + K ++ ++++D+Y KCG ++A +F + +VVSW M+ G
Sbjct: 329 VEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNG 388
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIK-LGLES 265
L G ++ LF M G++PD T ++L A + + + I + +
Sbjct: 389 LGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRP 448
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ ++D+ + G +R A L R+M
Sbjct: 449 KAEHYACMVDLLGRAGELREARDLIRTM 476
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 14/226 (6%)
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN 399
+L A +SL G Q+H K D +GN LIDMY K GE+ A F M D+N
Sbjct: 10 LLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMRDRN 69
Query: 400 VISWTSLIAGYAKHGYGHEAIELYKKMKHEG-MVPNDVTFLSLLFACSHTGLTCEGWELF 458
V+SWT+L+ G+ +HG + L +M+ PN+ T + L AC G T G
Sbjct: 70 VVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAG---- 125
Query: 459 TDMINKYRILPRA---EH---FSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
+ + + RA EH S +V ++++ G++ A + + + W+A++
Sbjct: 126 ---VGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSG 182
Query: 513 CSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARK 558
+ G+ L R + E + + +++ A R+
Sbjct: 183 YAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATRE 228
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 12/210 (5%)
Query: 3 IVRANFKTGQLKQALKF------SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHI 56
+V + + GQ+ +AL+ S + PD+ + S L F + + Q +H +
Sbjct: 284 VVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVE----QGRQVHCYG 339
Query: 57 ITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENAL 116
I + +++ ++ Y K G A + F M NVVSWT M++G ++G A+
Sbjct: 340 IKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAV 399
Query: 117 LVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA-LLDL 175
+F M GV ++ TY + L AC+ + R I++ R V A ++DL
Sbjct: 400 ALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDL 459
Query: 176 YAKCGWIEDAWILFERIERKDVVS-WNAMI 204
+ G + +A L + + V W ++
Sbjct: 460 LGRAGELREARDLIRTMPMEPTVGVWQTLL 489
>gi|225454363|ref|XP_002276073.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial [Vitis vinifera]
Length = 673
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 183/534 (34%), Positives = 295/534 (55%), Gaps = 11/534 (2%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HAH+I G + L L +V+ Y K + K FD MP +NVVSW +I G + G
Sbjct: 95 LHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKNVVSWNTLICGVVE-GN 153
Query: 112 DENALL-----VFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENL 166
+ AL+ F M+ + N T + LRA + + R + I K F N
Sbjct: 154 CKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQLHCFILKSGFDSNC 213
Query: 167 FVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ 226
FV SAL+D YAK G +++A F+ + +D+V WN M+ A+ G +F +F+ M +
Sbjct: 214 FVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMRLE 273
Query: 227 GMKPDCFTLGSILRAS--VGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIR 284
G+K D FT S++ + +G L K Q+H LII+L + + +L+D+Y+K +I
Sbjct: 274 GVKGDNFTFTSMINSCGVLGSCGLGK--QVHGLIIRLSFDLDVLVASALVDMYSKNENIE 331
Query: 285 SAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNIC 344
A + + M+ +I+S T +I G+ + + KEA L ++MI D++ L +L+ C
Sbjct: 332 DARKAFDGMIVKNIVSWTTMIVGYGQHGD-GKEAMRLLQEMIRVYTYPDELALASILSSC 390
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWT 404
N+++ + Q+HA+ + ++ NAL+ Y+K G I A ++F + + ++ISWT
Sbjct: 391 GNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVAEPDIISWT 450
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK 464
SL+ YA HG E +E+++KM + P+ V FL +L AC+H G EG F MIN
Sbjct: 451 SLMGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAFLGVLSACAHGGFVLEGLHYFNLMINV 510
Query: 465 YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGEL 524
Y+I+P +EH++C++DL R G L+ A N++ M ++P + A LGAC ++ N L
Sbjct: 511 YQIMPDSEHYTCIIDLLGRAGFLDEAINLLTSMPVEPRSDTLGAFLGACKVHRNVGLARW 570
Query: 525 AARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
A+ LF MEP + NY ++SN+Y + G W + + RKLM ER K PG S+++
Sbjct: 571 ASEKLFVMEPNEPANYSLMSNMYASVGHWFDVARVRKLMRERCDFKVPGCSWME 624
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/420 (29%), Positives = 220/420 (52%), Gaps = 17/420 (4%)
Query: 135 SSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER 194
S AL+ A++ +L GG+ + + K L +++ +L +Y KC D +F+ +
Sbjct: 77 SHALKISAKLGFLHGGKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPL 136
Query: 195 KDVVSWNAMIGGLAMQ----GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMK 250
K+VVSWN +I G+ F FR M+ + M P+C TL +LRAS+ ++
Sbjct: 137 KNVVSWNTLICGVVEGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASIELNDVGI 196
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR 310
Q+H I+K G +S+ + +L+D YAK+G + A + + D++ ++S +A
Sbjct: 197 CRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYAL 256
Query: 311 DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA 370
+ K AF +FK M L+ + D+ M+N C + S LG+Q+H + D
Sbjct: 257 NGVQGK-AFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVL 315
Query: 371 VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG 430
V +AL+DMY+K+ I DA +AFD M KN++SWT++I GY +HG G EA+ L ++M
Sbjct: 316 VASALVDMYSKNENIEDARKAFDGMIVKNIVSWTTMIVGYGQHGDGKEAMRLLQEMIRVY 375
Query: 431 MVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF----SCVVDLFARRGQ 486
P+++ S+L +C + T E + ++ Y + E F + +V +++ G
Sbjct: 376 TYPDELALASILSSCGNLSATSEVVQ-----VHAYVVENGFEAFLSIANALVSAYSKCGS 430
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLG-ELAARNLF-DMEPEKSVNYVVLS 544
+ SA+ + +P W++++GA + +G + G E+ + LF ++ P+K VLS
Sbjct: 431 IGSAFQSFSSV-AEPDIISWTSLMGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAFLGVLS 489
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 86/161 (53%), Gaps = 1/161 (0%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
T D S+L C + A + +HA+++ NG+E+ L ++ ++ Y+K G + SA
Sbjct: 376 TYPDELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAF 435
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
++F + E +++SWT+++ YA +G + + VF ML S VR ++ + L ACA
Sbjct: 436 QSFSSVAEPDIISWTSLMGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAFLGVLSACAHGG 495
Query: 146 W-LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
+ L+G I + + + + ++DL + G++++A
Sbjct: 496 FVLEGLHYFNLMINVYQIMPDSEHYTCIIDLLGRAGFLDEA 536
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 178/551 (32%), Positives = 296/551 (53%), Gaps = 1/551 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L+P + S L+ + +H+ I+ GY+SN + +I Y+ G V SAR
Sbjct: 144 LNPHVFTSFLKLFVSLDKAEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSV 203
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F+ + +++V W ++S Y +NG E++L + S M G N +T+ +AL+A +
Sbjct: 204 FEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAF 263
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ + G I K + + V LL LY + G + DA+ +F + + DVV W+ MI
Sbjct: 264 HFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARF 323
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
GF + + +F M + P+ FTL SIL G Q+H L++K+G +
Sbjct: 324 CQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDV 383
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
++ +LIDVYAK + +A +L+ + +++S +I G+ + +A ++F++ +
Sbjct: 384 YVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGY-ENLGEGGKALNMFREALR 442
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
++ + +V L CA++AS+ LG Q+H A K ++ AV N+LIDMYAK G+I
Sbjct: 443 NQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKV 502
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A F+EM +V SW +LI+GY+ HG G +A+ ++ MK PN +TFL +L CS+
Sbjct: 503 AQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSN 562
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
GL +G + F MI + I P EH++C+V LF R GQL+ A N+I + +P+ +W
Sbjct: 563 AGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWR 622
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
A+L A N +A + + P+ YV+LSN+Y A W N RK M+E+
Sbjct: 623 AMLSASMNQYNEEFARRSAEEILKINPKDEATYVLLSNMYAGAKQWANVASIRKSMKEKG 682
Query: 568 LRKNPGYSFLQ 578
++K PG S+++
Sbjct: 683 VKKEPGLSWIE 693
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 145/510 (28%), Positives = 247/510 (48%), Gaps = 21/510 (4%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD Y ++L+ CI K A IH I+ G +L + ++ Y K G A
Sbjct: 47 LDSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD MPERN VS+ + GYA ++ + ++S + R G N ++S L+ +
Sbjct: 107 FDEMPERNNVSYVTLTQGYAC----QDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKA 162
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ + I K + N FV +AL++ Y+ CG ++ A +FE I KD+V W ++
Sbjct: 163 EICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCY 222
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
G +DS L M G P+ +T + L+AS+G +H I+K E
Sbjct: 223 VENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDP 282
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
++ L+ +Y + G + A++++ M K D++ + +I+ F + + +A D+F M
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQ-NGFCNKAVDIFIRMRE 341
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ ++ L +LN CA LG Q+H K D V NALID+YAK ++
Sbjct: 342 GFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDT 401
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS- 446
A + F E+ KNV+SW ++I GY G G +A+ ++++ + +VTF S L AC+
Sbjct: 402 AVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACAS 461
Query: 447 ----HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
G+ G + T+ N R+ + ++D++A+ G ++ A + +M
Sbjct: 462 LASMELGVQVHGLAIKTN--NAKRVAVS----NSLIDMYAKCGDIKVAQTVFNEMETIDV 515
Query: 503 ASLWSAILGACSIYGNTSLGELAARNLFDM 532
AS W+A++ S +G LG A R +FD+
Sbjct: 516 AS-WNALISGYSTHG---LGRQALR-IFDI 540
>gi|307136370|gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 1131
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 183/556 (32%), Positives = 304/556 (54%), Gaps = 5/556 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ S+ C +H +I N + SNL ++ ++ YAK G + ARK F
Sbjct: 409 DEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQF 468
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ M + VSW A+I GY Q Y++ A +F M+ +GV ++ + +S + ACA ++ +
Sbjct: 469 EFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFK 528
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ + K + S+L+D+Y KCG + A +F + ++VVS NA+I G
Sbjct: 529 QGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYT 588
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG-LESSN 267
M +++ LF+ + G+KP T +L G L QIH ++K G L SS
Sbjct: 589 MSHL-EEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSE 647
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ SL+ +Y + L+ + ++ TALISG+A+ NH ++A ++ M
Sbjct: 648 MVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQ-NHHEKALQFYQHMR 706
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ D +L CA ++SL G+++H+ F + D ++LIDMYAK G++
Sbjct: 707 SDNILPDQATFASVLRACAGMSSLQTGQEVHSLIFHTGFNMDEITCSSLIDMYAKCGDVK 766
Query: 387 DANRAFDEMGDKN-VISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
+ + F EM +N VISW S+I G AK+GY EA+E++K+M+ + ++P++VTFL +L AC
Sbjct: 767 GSLQVFHEMPRRNSVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSAC 826
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
SH G EG ++F M+N Y++ PR +H C+VD+ R G L A I ++ K L
Sbjct: 827 SHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPML 886
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
WS +LGAC +G+ G+ AA L +++P+ S +YV+LS +Y + W A R+ M+
Sbjct: 887 WSTLLGACRKHGDEVRGKRAANKLMELKPQSSSSYVLLSGLYAESENWSGADSLRREMKL 946
Query: 566 RSLRKNPGYSFLQSSK 581
+ ++K PGYS+++ +
Sbjct: 947 KGVKKLPGYSWIEPGR 962
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 181/572 (31%), Positives = 298/572 (52%), Gaps = 52/572 (9%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDP--STYMSLLQFCIDKKAERQAHLIHAHIITNG 60
++ + K G ++A+ F L T L S+ S+L ++HA I G
Sbjct: 280 MISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEG 339
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+ N+++ + ++ YAK + +A++ F+ + ERN+V W AM+ G+AQNG + + FS
Sbjct: 340 LDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFS 399
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M R G + ++FT++S ACA + +L G + + K +F NLFV +AL+D+YAK G
Sbjct: 400 YMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSG 459
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+++A FE ++ D VSWNA+I G + +ND++F++FR M+ G+ PD +L SI+
Sbjct: 460 ALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVS 519
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
A E + Q H L++K+GL++S SLID+Y K G + +A ++ SM +++S
Sbjct: 520 ACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVS 579
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
ALI+G+ +H +EA LF+++ + + +V +L+ C LNLGRQIH
Sbjct: 580 INALIAGYTM--SHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQV 637
Query: 361 FKYQS-SYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHGYGHE 418
K+ S V +L+ MY S AD+ F E+ K ++ WT+LI+GYA+ + +
Sbjct: 638 MKWGFLSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQNHHEK 697
Query: 419 AIELYKKMKHEGMVPNDVTFLSLLFACS----------------HTG-----LTCEGWEL 457
A++ Y+ M+ + ++P+ TF S+L AC+ HTG +TC
Sbjct: 698 ALQFYQHMRSDNILPDQATFASVLRACAGMSSLQTGQEVHSLIFHTGFNMDEITCSS--- 754
Query: 458 FTDMINK----------YRILPRAEHF----SCVVDLFARRGQLESAYNMIRQM---NIK 500
DM K + +PR S +V L A+ G E A + +QM +I
Sbjct: 755 LIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMIVGL-AKNGYAEEALEIFKQMEQQSII 813
Query: 501 PTASLWSAILGACSIYGNTSLGELAARNLFDM 532
P + +L ACS G S G R +FD+
Sbjct: 814 PDEVTFLGVLSACSHAGRVSEG----RKVFDL 841
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 148/488 (30%), Positives = 245/488 (50%), Gaps = 37/488 (7%)
Query: 71 VIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
VI Y +G + ARK F ++P NVV+W MISG+A+ G+ E A+ F + ++G++A
Sbjct: 249 VINAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKAT 308
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE 190
+ + S L A A + L G M+ K +N++V SAL+++YAKC ++ A +F
Sbjct: 309 RSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFN 368
Query: 191 RIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMK 250
+ +++V WNAM+GG A G + F M R G +PD FT SI A L
Sbjct: 369 SLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDF 428
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR 310
Q+H ++IK S+ + +L+D+YAK G+++ A + + M D +S A+I G+ +
Sbjct: 429 GGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQ 488
Query: 311 DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA 370
++ ++ EAF +F+ M+ + D+V L +++ CANV G+Q H K
Sbjct: 489 EE-YNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTC 547
Query: 371 VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG 430
G++LIDMY K G + A F M +NV+S +LIAGY + EAI L+++++ G
Sbjct: 548 AGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYTM-SHLEEAIHLFQEIQMVG 606
Query: 431 MVPNDVTFLSLLFACS-----------HTGLTCEGWELFTDMI---------NKYRILPR 470
+ P +VTF LL C H + G+ ++M+ N R
Sbjct: 607 LKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADS 666
Query: 471 AEHFS------------CVVDLFARRGQLESA---YNMIRQMNIKPTASLWSAILGACSI 515
FS ++ +A++ E A Y +R NI P + ++++L AC+
Sbjct: 667 ETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQATFASVLRACAG 726
Query: 516 YGNTSLGE 523
+ G+
Sbjct: 727 MSSLQTGQ 734
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/500 (27%), Positives = 233/500 (46%), Gaps = 60/500 (12%)
Query: 31 STYMSLLQFCIDKKAERQAH------------------LIHAHIITNGYESNLHLSTKVI 72
S + LQ C+ QAH +IH+ + G L ++
Sbjct: 24 SPHSEFLQICLQHCRRIQAHNLFNEKPKAVLQALSTAKVIHSKSLKIGVGLKGLLGNVIV 83
Query: 73 IFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQF 132
Y K G+V A+KAF R+ +++V +W +++S Y +G + F M GVR N+F
Sbjct: 84 DLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHGVRPNEF 143
Query: 133 TYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI 192
T++ L AC+ ++ + G+ + + K F F + L+D+YAKC + DA ++F+
Sbjct: 144 TFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDARLVFDGA 203
Query: 193 ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS 252
D VSW +I G GF ++ +F M R G PD L ++
Sbjct: 204 LNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVTV-------------- 249
Query: 253 QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDD 312
I+ Y G + A +L+ + ++++ +ISG A+
Sbjct: 250 ---------------------INAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAK-R 287
Query: 313 NHSKEAFDLFKDMILKKMGIDDVILCL--MLNICANVASLNLGRQIHAFAFKYQSSYDAA 370
++EA F + LKK G+ L +L+ A+++ LN G +HA A K +
Sbjct: 288 GFAEEAISFFLE--LKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVY 345
Query: 371 VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG 430
VG+AL++MYAK ++ A + F+ +G++N++ W +++ G+A++G E +E + MK G
Sbjct: 346 VGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHG 405
Query: 431 MVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA 490
P++ TF S+ AC+ G +L T MI K + + +VD++A+ G L+ A
Sbjct: 406 PQPDEFTFTSIFSACASLHYLDFGGQLHTVMI-KNKFTSNLFVANALVDMYAKSGALKEA 464
Query: 491 YNMIRQMNIKPTASLWSAIL 510
M I S W+AI+
Sbjct: 465 RKQFEFMKIHDNVS-WNAII 483
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 153/320 (47%), Gaps = 12/320 (3%)
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN 313
IH +K+G+ L ++D+Y K G++ A + + + K D+ + +++S + D
Sbjct: 63 IHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYL-DHG 121
Query: 314 HSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN 373
F M + ++ ++L+ C+ + +N G+Q+H FK + +
Sbjct: 122 LFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQG 181
Query: 374 ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP 433
LIDMYAK + DA FD + + +SWT+LIAGY + G+ EA++++ KM+ G VP
Sbjct: 182 GLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVP 241
Query: 434 NDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNM 493
+ + ++++ A G + +LFT + N P ++ ++ A+RG E A +
Sbjct: 242 DQIALVTVINAYVALGRLADARKLFTQIPN-----PNVVAWNVMISGHAKRGFAEEAISF 296
Query: 494 ---IRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYV--VLSNIYT 548
+++ +K T S ++L A + + G + + +V YV L N+Y
Sbjct: 297 FLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNV-YVGSALVNMYA 355
Query: 549 AAGAWDNARKTRKLMEERSL 568
D A++ + ER++
Sbjct: 356 KCSKMDAAKQVFNSLGERNI 375
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 179/489 (36%), Positives = 280/489 (57%), Gaps = 4/489 (0%)
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLR-SGVRANQFTYSSALRACARMRWLQGG 150
P + + ++ G+ E+AL +F ML + V +Q T + AL++C+RM L G
Sbjct: 79 PPLSTPCYNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVG 138
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
R IQ K + + FV S+L+ +YA C + A +LF+ +E VV WNA+I
Sbjct: 139 RGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKN 198
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKL 269
G + +F+ M+ G+ D TL S++ A G I K+ + + + + + GL + L
Sbjct: 199 GNWMEVVEMFKGMLEVGVAFDEITLVSVVTA-CGRIGDAKLGKWVAEYVDEKGLVRNRNL 257
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+LID+YAK G + A +L+ M D+++ +A+ISG+ + D +EA LF +M L +
Sbjct: 258 MTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQ-CREALALFSEMQLAE 316
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ +DV + +L+ CA + +L G+ +H++ + + S +G AL+D YAK G I DA
Sbjct: 317 VEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAV 376
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
AF+ M KN +WT+LI G A +G G EA+EL+ M+ + P DVTF+ +L ACSH+
Sbjct: 377 EAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSC 436
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
L EG F M Y I PRAEH+ CVVDL R G ++ AY IR M I+P A +W A+
Sbjct: 437 LVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRAL 496
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
L +C+++ N +GE A + + + P S +Y++LSNIY + G W NA RK M++R +
Sbjct: 497 LSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIE 556
Query: 570 KNPGYSFLQ 578
K PG S ++
Sbjct: 557 KTPGCSLIE 565
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 202/433 (46%), Gaps = 21/433 (4%)
Query: 3 IVRANFKTGQLKQALKFSLS-------CPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAH 55
++RA G + AL + CPD T L+ C I A+
Sbjct: 89 LMRALLHAGHPEDALHLFVEMLDVASVCPDQ----HTVACALKSCSRMCTLDVGRGIQAY 144
Query: 56 IITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENA 115
+ G ++ + + +I YA DV +A+ FD + E VV W A+I+ Y +NG
Sbjct: 145 AVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEV 204
Query: 116 LLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDL 175
+ +F ML GV ++ T S + AC R+ + G+ + + + V N + +AL+D+
Sbjct: 205 VEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDM 264
Query: 176 YAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTL 235
YAKCG + A LF+ ++ +DVV+W+AMI G ++ LF M ++P+ T+
Sbjct: 265 YAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTM 324
Query: 236 GSILRAS--VGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
S+L A +G +E K +H I + L + L +L+D YAK G I A + + SM
Sbjct: 325 VSVLSACAVLGALETGK--WVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESM 382
Query: 294 LKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG 353
+ + TALI G A + +EA +LF M + DV +L C++ + G
Sbjct: 383 PVKNSWTWTALIKGMA-TNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEG 441
Query: 354 RQ-IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYA 411
R+ + Y A ++D+ ++G I +A + M + N + W +L++ A
Sbjct: 442 RRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCA 501
Query: 412 KHG---YGHEAIE 421
H G EA++
Sbjct: 502 VHKNVEIGEEALK 514
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 167/445 (37%), Positives = 266/445 (59%), Gaps = 2/445 (0%)
Query: 134 YSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE 193
YS L C +R L+ GR I IQ F ++L + + +L++YAKCG +E+A LF+++
Sbjct: 108 YSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMP 167
Query: 194 RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ 253
KD+VSW +I G + G ++ LF M+ G +P+ FTL S+L+AS G Q
Sbjct: 168 TKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQ 227
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN 313
+H +K G + + + SL+D+YA++ +R A ++ S+ +++S ALI+G AR
Sbjct: 228 LHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHAR-KG 286
Query: 314 HSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN 373
+ LF M+ + + CA+ SL G+ +HA K A +GN
Sbjct: 287 EGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGN 346
Query: 374 ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP 433
LIDMYAKSG I DA + F + ++++SW S+I+GYA+HG G EA++L+++M + P
Sbjct: 347 TLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQP 406
Query: 434 NDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNM 493
N++TFLS+L ACSH+GL EG + + +++ K++I + H VVDL R G+L A
Sbjct: 407 NEITFLSVLTACSHSGLLDEG-QYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKF 465
Query: 494 IRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAW 553
I +M IKPTA++W A+LG+C ++ N LG AA +F+++P S +V+LSNIY +AG
Sbjct: 466 IEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRL 525
Query: 554 DNARKTRKLMEERSLRKNPGYSFLQ 578
+A K RK+M+E ++K P S+++
Sbjct: 526 SDAAKVRKMMKESGVKKEPACSWVE 550
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 126/394 (31%), Positives = 213/394 (54%), Gaps = 2/394 (0%)
Query: 21 LSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGD 80
++C + + Y +L C + +Q IHAHI ++ +E +L L ++ YAK G
Sbjct: 96 INCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGS 155
Query: 81 VLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRA 140
+ A+ FD+MP +++VSWT +ISGY+Q+G AL +F ML G + N+FT SS L+A
Sbjct: 156 LEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKA 215
Query: 141 CARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSW 200
GR + K + N+ V S+LLD+YA+ + +A ++F + K+VVSW
Sbjct: 216 SGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSW 275
Query: 201 NAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIK 260
NA+I G A +G + LF M+RQG +P FT S+ A L + +H +IK
Sbjct: 276 NALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIK 335
Query: 261 LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFD 320
G + + +LID+YAK GSI+ A +++R ++K DI+S ++ISG+A+ EA
Sbjct: 336 SGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQ-HGLGAEALQ 394
Query: 321 LFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYA 380
LF+ M+ K+ +++ +L C++ L+ G+ K++ A ++D+
Sbjct: 395 LFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLG 454
Query: 381 KSGEIADANRAFDEMGDKNVIS-WTSLIAGYAKH 413
++G + +AN+ +EM K + W +L+ H
Sbjct: 455 RAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMH 488
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 147/287 (51%), Gaps = 2/287 (0%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
++GQ +AL P+ T SLL+ ++ +HA + GY+ N+H
Sbjct: 183 QSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVH 242
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ + ++ YA+ + A+ F+ + +NVVSW A+I+G+A+ G E+ + +F MLR G
Sbjct: 243 VGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQG 302
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
FTYSS ACA L+ G+ + + K ++ + L+D+YAK G I+DA
Sbjct: 303 FEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAK 362
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+F R+ ++D+VSWN++I G A G ++ LF M++ ++P+ T S+L A
Sbjct: 363 KVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSG 422
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
L + +L+ K +E+ +++D+ + G + A + M
Sbjct: 423 LLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEM 469
>gi|302791495|ref|XP_002977514.1| hypothetical protein SELMODRAFT_107304 [Selaginella moellendorffii]
gi|300154884|gb|EFJ21518.1| hypothetical protein SELMODRAFT_107304 [Selaginella moellendorffii]
Length = 673
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 175/521 (33%), Positives = 297/521 (57%), Gaps = 6/521 (1%)
Query: 33 YMSLLQFCI---DKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFD 89
+ LL+ C +K + I ++ G+++++ ++T +I A+ GD+ AR+AFD
Sbjct: 13 FTRLLEACARSPEKSDRSRLAEIQFRVVATGFDADVTVATALISALARCGDLEGAREAFD 72
Query: 90 RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG 149
R+P +NVVSW +MI+ ++G+ AL ++ M GV+ + +Y AL +C+ +R L+
Sbjct: 73 RIPAKNVVSWNSMIAALNEHGHFARALEIYRRMEPEGVKPSDISYIHALCSCSGLRDLEQ 132
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
G+ I + F +FV +AL+++Y+KC ++ A FERI+ KDVVSWN+MI +
Sbjct: 133 GKSIHDRVATDGFDTQVFVGNALVNMYSKCRRLDLAREAFERIDSKDVVSWNSMIAAHSQ 192
Query: 210 QGFNDDSFWLFRSMM-RQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G +D++ +R M+ + ++P TL L A++ + + I+LGLE
Sbjct: 193 LGGSDEALETYRRMIGEERLEPTKITLVHALGAALSLRSAGDTKLLQEDAIRLGLEGDLL 252
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +L+ K G + A ++ M + +++S + LI+ A + ++A +LF M L
Sbjct: 253 VGSALVSALGKCGCLDQARAVFDRMERRNVVSWSGLIAALA-EHGRGRDAIELFHRMDLD 311
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ ++V L +L CA+ ++ GR+ HA + V NAL++MY K G + A
Sbjct: 312 GIQPNEVTLLSVLEACASTGAIAEGRRTHARVSGCGFEAETNVANALVNMYGKCGHLGSA 371
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
FD M +NV+SWT+++AGYA HG+ EA ++K M EG+ PN +TF+S+LF CSH
Sbjct: 372 RTVFDAMTWRNVVSWTAMLAGYAHHGHTEEARRVFKAMALEGIQPNVITFVSVLFNCSHA 431
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
G+ +G E F M+ + I+P EH+ CV+DL R G LE A ++R M ++P + W++
Sbjct: 432 GVVSDGLEQFHIMVGDFGIVPVTEHYGCVIDLLGRAGWLEEAEELLRTMPVEPDKAAWNS 491
Query: 509 ILGACSIYGNTSLGELAARNLFDME-PEKSVNYVVLSNIYT 548
+LGAC ++ +T + A+ D+ P S YV+LSN+YT
Sbjct: 492 LLGACKVHSHTDRAKRIAKLACDLALPFASAPYVLLSNMYT 532
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 205/419 (48%), Gaps = 6/419 (1%)
Query: 11 GQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLS 68
G +AL+ + PS +Y+ L C + Q IH + T+G+++ + +
Sbjct: 93 GHFARALEIYRRMEPEGVKPSDISYIHALCSCSGLRDLEQGKSIHDRVATDGFDTQVFVG 152
Query: 69 TKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML-RSGV 127
++ Y+K + AR+AF+R+ ++VVSW +MI+ ++Q G + AL + M+ +
Sbjct: 153 NALVNMYSKCRRLDLAREAFERIDSKDVVSWNSMIAAHSQLGGSDEALETYRRMIGEERL 212
Query: 128 RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWI 187
+ T AL A +R +++Q + +L V SAL+ KCG ++ A
Sbjct: 213 EPTKITLVHALGAALSLRSAGDTKLLQEDAIRLGLEGDLLVGSALVSALGKCGCLDQARA 272
Query: 188 LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIE 247
+F+R+ER++VVSW+ +I LA G D+ LF M G++P+ TL S+L A
Sbjct: 273 VFDRMERRNVVSWSGLIAALAEHGRGRDAIELFHRMDLDGIQPNEVTLLSVLEACASTGA 332
Query: 248 LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG 307
+ + + H + G E+ + +L+++Y K G + SA ++ +M +++S TA+++G
Sbjct: 333 IAEGRRTHARVSGCGFEAETNVANALVNMYGKCGHLGSARTVFDAMTWRNVVSWTAMLAG 392
Query: 308 FARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG-RQIHAFAFKYQSS 366
+A H++EA +FK M L+ + + + +L C++ ++ G Q H +
Sbjct: 393 YAH-HGHTEEARRVFKAMALEGIQPNVITFVSVLFNCSHAGVVSDGLEQFHIMVGDFGIV 451
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHGYGHEAIELYK 424
+ID+ ++G + +A M + + +W SL+ H + A + K
Sbjct: 452 PVTEHYGCVIDLLGRAGWLEEAEELLRTMPVEPDKAAWNSLLGACKVHSHTDRAKRIAK 510
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 181/554 (32%), Positives = 307/554 (55%), Gaps = 4/554 (0%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L D T +++L C + IH + G + ++ ++ Y+K G + A+
Sbjct: 245 LPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQM 304
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG--VRANQFTYSSALRACARM 144
+F + +NVVSW MIS ++ G A + M G ++AN+ T + L AC
Sbjct: 305 SFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDK 364
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
L+ + + G + F +++ + +A + YAKCG + A +F I K V SWNA+I
Sbjct: 365 LQLRSLKELHGYSFRHCF-QHVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALI 423
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
GG A G + L M G +PD FT+ S+L A L +IH +++ GLE
Sbjct: 424 GGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLE 483
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ + SL+ Y G SA L+ M +++S A+ISG++++ E+ LF+
Sbjct: 484 TDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQN-GLPYESLALFRK 542
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
+ + + ++ + + C+ +++L LG++ H + K + DA VG ++IDMYAKSG
Sbjct: 543 SLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGC 602
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
I ++ + FD + DKNV SW ++I + HG+G EAIELY++MK G +P+ T++ +L A
Sbjct: 603 IKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMA 662
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
C H GL EG + F +M N I P+ EH++C++D+ AR G+L+ A ++ +M +
Sbjct: 663 CGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNR 722
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
+WS++L +C +G +GE A+ L ++EP+K+ NYV+LSN+Y G WD R+ R++M+
Sbjct: 723 IWSSLLRSCRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMK 782
Query: 565 ERSLRKNPGYSFLQ 578
E L+K+ G S+++
Sbjct: 783 EIGLQKDAGCSWIE 796
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 231/417 (55%), Gaps = 7/417 (1%)
Query: 36 LLQFCIDKKAERQAHLIHAHII-TNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
LLQ C ++K +H + + Y ++ L+T++I YA G L +R FD M +
Sbjct: 49 LLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETK 108
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLR-SGVRANQFTYSSALRACARMRWLQGGRMI 153
N++ W A++SGY +NG + + VF ++ + + + FT+ S ++AC + ++ G +I
Sbjct: 109 NLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVI 168
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN 213
G + K V ++FV +AL+ +Y KCG +++A +F+ + ++VSWN+MI + GF+
Sbjct: 169 HGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFS 228
Query: 214 DDSFWLFRSMM-RQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS 272
DSF L M+ +G+ PD T+ +IL G E+ IH L +KLGL + +
Sbjct: 229 RDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNA 288
Query: 273 LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK--KM 330
++ +Y+K G + A + +++S +IS F+ + + EAF+L ++M ++ +M
Sbjct: 289 MVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGD-VNEAFNLLQEMQIQGEEM 347
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
++V + +L C + L +++H ++F++ + + NA I YAK G + A +
Sbjct: 348 KANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQH-VELSNAFILAYAKCGALNSAEK 406
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
F +GDK V SW +LI G+A++G +A+ L +M + G P+ T SLL AC+H
Sbjct: 407 VFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAH 463
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 142/501 (28%), Positives = 261/501 (52%), Gaps = 13/501 (2%)
Query: 25 DTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVL 82
DT P T+ S+++ C R +IH +I G ++ + ++ Y K G V
Sbjct: 139 DTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVD 198
Query: 83 SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML-RSGVRANQFTYSSALRAC 141
A K FD MPE N+VSW +MI +++NG+ ++ + ML G+ + T + L C
Sbjct: 199 EAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVC 258
Query: 142 ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN 201
A + G I G K E + V +A++ +Y+KCG++ +A + F + K+VVSWN
Sbjct: 259 AGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWN 318
Query: 202 AMIGGLAMQGFNDDSFWLFRSMMRQG--MKPDCFTLGSILRASVGGIELMKISQIHDLII 259
MI +++G +++F L + M QG MK + T+ ++L A + ++L + ++H
Sbjct: 319 TMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSF 378
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
+ + +L+ + I YAK G++ SA +++ + + S ALI G A++ + ++A
Sbjct: 379 RHCFQHV-ELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGD-PRKAL 436
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMY 379
L M D + +L CA++ SL G++IH + + D VG +L+ Y
Sbjct: 437 HLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHY 496
Query: 380 AKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFL 439
G+ + A FD M DKN++SW ++I+GY+++G +E++ L++K EG+ +++ +
Sbjct: 497 IHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIV 556
Query: 440 SLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF-SC-VVDLFARRGQLESAYNMIRQM 497
S+ ACS G E ++ + L + F C ++D++A+ G ++ + + +
Sbjct: 557 SVFGACSQLSALRLGKEAHGYVL---KALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGL 613
Query: 498 NIKPTASLWSAILGACSIYGN 518
K AS W+AI+ A I+G+
Sbjct: 614 KDKNVAS-WNAIIVAHGIHGH 633
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 154/299 (51%), Gaps = 13/299 (4%)
Query: 3 IVRANFKTGQLKQALK--FSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
++ + + G ++AL F ++ D T SLL C K+ + IH +++ NG
Sbjct: 422 LIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNG 481
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
E++ + T ++ Y G SAR FDRM ++N+VSW AMISGY+QNG +L +F
Sbjct: 482 LETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFR 541
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
L G+++++ S AC+++ L+ G+ G + K E+ FV +++D+YAK G
Sbjct: 542 KSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSG 601
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
I+++ +F+ ++ K+V SWNA+I + G ++ L+ M + G PD FT IL
Sbjct: 602 CIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILM 661
Query: 241 AS------VGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
A G++ K Q +LI E + LID+ A+ G + A +L M
Sbjct: 662 ACGHAGLVEEGLKYFKEMQNFNLI-----EPKLEHYACLIDMLARAGRLDDALRLVNEM 715
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 146/310 (47%), Gaps = 14/310 (4%)
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
L LI +YA GS + ++ +M ++I AL+SG+ R+ + + +F D++
Sbjct: 81 LNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYG-DVVKVFMDLVSD 139
Query: 329 K-MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
D+ ++ C + + LG IH K D VGNAL+ MY K G + +
Sbjct: 140 TDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDE 199
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM-KHEGMVPNDVTFLSLLFACS 446
A + FD M + N++SW S+I ++++G+ ++ +L +M EG++P+ VT +++L C+
Sbjct: 200 AMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCA 259
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
G G + + K + + +V ++++ G L A + N K S W
Sbjct: 260 GEGEVDIGMGIHGLAV-KLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVS-W 317
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
+ ++ A S+ G+ + + + E N V + N+ A ++ R
Sbjct: 318 NTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPAC---------LDKLQLR 368
Query: 567 SLRKNPGYSF 576
SL++ GYSF
Sbjct: 369 SLKELHGYSF 378
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 92/185 (49%), Gaps = 12/185 (6%)
Query: 339 LMLNICANVASLNLGRQIHAF---AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEM 395
L+L C N + GR++H F + Y++ Y + LI MYA G D+ FD M
Sbjct: 48 LLLQACGNQKDIETGRRLHKFVSDSTHYRNDY--VLNTRLIKMYAMCGSPLDSRLVFDNM 105
Query: 396 GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE-GMVPNDVTFLSLLFACSHTGLTCEG 454
KN+I W +L++GY ++G + ++++ + + P++ TF S++ AC L
Sbjct: 106 ETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGI-LDVRL 164
Query: 455 WELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL--WSAILGA 512
E+ M+ K ++ + +V ++ + G ++ A ++ + P +L W++++ A
Sbjct: 165 GEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEA---MKVFDFMPETNLVSWNSMICA 221
Query: 513 CSIYG 517
S G
Sbjct: 222 FSENG 226
>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Vitis vinifera]
gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
Length = 880
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 181/529 (34%), Positives = 290/529 (54%), Gaps = 2/529 (0%)
Query: 51 LIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
L+HAH++ E NL L T ++ Y K + A K E +V WTA+ISG+ Q+
Sbjct: 237 LVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSL 296
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
A+ F M SGV N FTYS L AC+ + L G+ I + ++ V +
Sbjct: 297 KFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGN 356
Query: 171 ALLDLYAKCG-WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
+L+D+Y KC IEDA F I +V+SW ++I G + G ++S +F +M G++
Sbjct: 357 SLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVR 416
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
P+ FTL +IL A L + ++H IIK ++ + +L+D YA G + A+ +
Sbjct: 417 PNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHV 476
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
M D+I+ T+L + + NH + A ++ M + +D L L+ A +
Sbjct: 477 TSMMKHRDVITYTSLATRINQTGNH-EMALNIITHMNKDDVRMDGFSLASFLSAAAGIPI 535
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
+ G+Q+H ++ K +V N L+D+Y K G I DA+R+F E+ + + +SW LI G
Sbjct: 536 METGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFG 595
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
A +G+ A+ ++ M+ G+ P+ +T L +L+ACSH GL G + F M K+ I P
Sbjct: 596 LASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIRP 655
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
+ +H+ C+VDL R G+LE A N+I M KP A ++ +LGAC ++GN LGE AR
Sbjct: 656 QLDHYVCLVDLLGRAGRLEEAMNVIETMPFKPDALIYKTLLGACKLHGNIPLGEHMARQG 715
Query: 530 FDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+++P YV+L+N+Y +G + KTR++M ER +RKNPG S+++
Sbjct: 716 LELDPSDPAFYVLLANLYDDSGRSELGEKTRRMMRERGVRKNPGQSWME 764
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 158/468 (33%), Positives = 256/468 (54%), Gaps = 15/468 (3%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
++ FC + ++ R IH+ II G++ ++ LS ++ Y K V AR+ FD MP R+
Sbjct: 22 IVSFC-NSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRD 80
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG 155
V SWT ++S Y + G E AL +F +ML SG N+FT S+ALR+C+ +R G Q
Sbjct: 81 VASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQA 140
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD 215
+ K F N + SAL+D Y+KCG ++A+ +FE + D+VSW M+ G
Sbjct: 141 LVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQ 200
Query: 216 SFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLTGSLI 274
+ L+ M++ G+ P+ FT +L A S G+ K+ H ++ + +E + L +L+
Sbjct: 201 ALQLYHRMIQTGVAPNEFTFVKLLAASSFLGLNYGKLVHAHLMMWR--IELNLVLKTALV 258
Query: 275 DVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD 334
D+Y K SI A ++ + L+ D+ TA+ISGF + +EA F +M + ++
Sbjct: 259 DMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKF-REAITAFHEMETSGVVPNN 317
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK-SGEIADANRAFD 393
+LN C+++ +L+LG+QIH+ D +VGN+L+DMY K S I DA RAF
Sbjct: 318 FTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFR 377
Query: 394 EMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCE 453
+ NVISWTSLIAG+++HG E+I+++ M+ G+ PN T ++L AC +
Sbjct: 378 GIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQ 437
Query: 454 GWELFTDMINKYRILPRAEHFSCV----VDLFARRGQLESAYNMIRQM 497
T ++ Y I A++ V VD +A G ++ A+++ M
Sbjct: 438 -----TRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMM 480
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 124/263 (47%), Gaps = 1/263 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T ++L C K+ Q +H +II N ++++ + ++ YA +G V A M
Sbjct: 421 TLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMM 480
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
R+V+++T++ + Q G E AL + + M + VR + F+ +S L A A + ++ G+
Sbjct: 481 KHRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGK 540
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ K + V + L+DLY KCG I DA F I D VSWN +I GLA G
Sbjct: 541 QLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFGLASNG 600
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLT 270
+ F M G++PD T +L A S GG+ M + + K G+
Sbjct: 601 HVSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIRPQLDHY 660
Query: 271 GSLIDVYAKYGSIRSAYQLYRSM 293
L+D+ + G + A + +M
Sbjct: 661 VCLVDLLGRAGRLEEAMNVIETM 683
>gi|413938143|gb|AFW72694.1| hypothetical protein ZEAMMB73_533387 [Zea mays]
Length = 663
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 187/558 (33%), Positives = 294/558 (52%), Gaps = 6/558 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
D T+ + C + R +H + G+ S+ ++ ++ Y + DV +A
Sbjct: 107 FDHLTFTFAAKACAGLRLRRHGRAVHGRALAAGFGSDAYVQNAIVSMYMRCRDVAAAEAV 166
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F +P R VSW +I+G ++G E AL VF M+ GV ++ + S L ACA+ R L
Sbjct: 167 FVALPSRTTVSWNTVITGCVKDGRAERALEVFETMVDRGVCIDRASVVSVLPACAQARDL 226
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILF-ERIERKDVVSWNAMIGG 206
GR + + + VK+AL+D+Y KCG +EDA +F E KDVVSW MIG
Sbjct: 227 HTGRAVHRLAVVRGLGKYVAVKNALIDMYGKCGSLEDARRVFDEDSYDKDVVSWTVMIGA 286
Query: 207 LAMQGFNDDSFWLFRSMMRQG-MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
+ +F L M+ +P+ T+ +L A + H L I+LGL S
Sbjct: 287 YVLNDHASKAFALGSEMLVSSEAQPNAVTMAHLLSACASLLSGKHAKCTHALCIRLGLGS 346
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLY-RSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ +L+D YAK G + + + +T+ + A ISG+ + D K+A LFK
Sbjct: 347 DIVVETALVDCYAKCGYMGVIDMVVEKGSRRTE--TWNAAISGYTQRDQ-GKKALALFKR 403
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M+ + + D + ++ A A L IH + LID+YAK+G+
Sbjct: 404 MLAESVRPDSATMASVIPAYAESADLVQANNIHCCLLVRGCLVSTDIATGLIDLYAKAGD 463
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ A F + +K+V++WT++IAGY HG+ A+ LY +M G++PN VT SLL +
Sbjct: 464 LGVAWELFQCLPEKDVVAWTTVIAGYGMHGHAQTAMLLYSRMVELGVMPNTVTIASLLHS 523
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
CSH G+ EG LF DM + ++P AEH+ C+VD+ R G++E AY I M +PT S
Sbjct: 524 CSHAGMVDEGLRLFNDMHGVHGLMPNAEHYLCLVDMLGRAGRIEEAYRRIEDMPFEPTVS 583
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
+WS++LGAC ++ N GE+AA++LF++EP+ NYV+L +Y AA W + + R++ME
Sbjct: 584 VWSSLLGACVLHENVEFGEVAAKHLFELEPDNVGNYVLLGKVYAAAERWSDVQHLRRVME 643
Query: 565 ERSLRKNPGYSFLQSSKK 582
L K+PGY + + +
Sbjct: 644 GMDLHKDPGYCVVDAKSE 661
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 205/422 (48%), Gaps = 16/422 (3%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPD--TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
++ K G+ ++AL+ + D +D ++ +S+L C + +H +
Sbjct: 180 TVITGCVKDGRAERALEVFETMVDRGVCIDRASVVSVLPACAQARDLHTGRAVHRLAVVR 239
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP-ERNVVSWTAMISGYAQNGYDENALLV 118
G + + +I Y K G + AR+ FD +++VVSWT MI Y N + A +
Sbjct: 240 GLGKYVAVKNALIDMYGKCGSLEDARRVFDEDSYDKDVVSWTVMIGAYVLNDHASKAFAL 299
Query: 119 FSAMLRSG-VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYA 177
S ML S + N T + L ACA + + + + ++ V++AL+D YA
Sbjct: 300 GSEMLVSSEAQPNAVTMAHLLSACASLLSGKHAKCTHALCIRLGLGSDIVVETALVDCYA 359
Query: 178 KCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGS 237
KCG++ ++ E+ R+ +WNA I G + + LF+ M+ + ++PD T+ S
Sbjct: 360 KCGYMGVIDMVVEKGSRR-TETWNAAISGYTQRDQGKKALALFKRMLAESVRPDSATMAS 418
Query: 238 ILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
++ A +L++ + IH ++ G S + LID+YAK G + A++L++ + + D
Sbjct: 419 VIPAYAESADLVQANNIHCCLLVRGCLVSTDIATGLIDLYAKAGDLGVAWELFQCLPEKD 478
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
+++ T +I+G+ H++ A L+ M+ + + V + +L+ C++ ++ G ++
Sbjct: 479 VVAWTTVIAGYGM-HGHAQTAMLLYSRMVELGVMPNTVTIASLLHSCSHAGMVDEGLRL- 536
Query: 358 AFAFKYQSSYDAAVGNA-----LIDMYAKSGEIADANRAFDEMGDKNVIS-WTSLIAGYA 411
F + NA L+DM ++G I +A R ++M + +S W+SL+
Sbjct: 537 ---FNDMHGVHGLMPNAEHYLCLVDMLGRAGRIEEAYRRIEDMPFEPTVSVWSSLLGACV 593
Query: 412 KH 413
H
Sbjct: 594 LH 595
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 179/535 (33%), Positives = 291/535 (54%), Gaps = 8/535 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IH ++ +G + + + +I Y K G V AR F +M E ++VSW MISG A +G
Sbjct: 928 IHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGL 987
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG----RMIQGSIQKGRFVENLF 167
+E ++ +F +LR G+ +QFT +S LRAC+ L GG I K V + F
Sbjct: 988 EECSVGMFVDLLRGGLLPDQFTVASVLRACSS---LGGGCHLATQIHACAMKAGVVLDSF 1044
Query: 168 VKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
V + L+D+Y+K G +E+A LF + D+ SWNAM+ G + G + L+ M G
Sbjct: 1045 VSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESG 1104
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
+ + TL + +A+ G + L + QI +++K G + ++D+Y K G + SA
Sbjct: 1105 ERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESAR 1164
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
+++ + D ++ T +ISG ++ + A + M L K+ D+ ++ C+ +
Sbjct: 1165 RIFNEIPSPDDVAWTTMISGCV-ENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLL 1223
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI 407
+L GRQIHA K ++D V +L+DMYAK G I DA F + SW ++I
Sbjct: 1224 TALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMI 1283
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRI 467
G A+HG EA++ +++MK G+ P+ VTF+ +L ACSH+GL E +E F M Y I
Sbjct: 1284 VGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGI 1343
Query: 468 LPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAAR 527
P EH+SC+VD +R G++ A +I M + +AS++ +L AC + + G+ A
Sbjct: 1344 EPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAE 1403
Query: 528 NLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
L +EP S YV+LSN+Y AA W+N R +M + +++K+PG+S++ K
Sbjct: 1404 KLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNK 1458
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 136/504 (26%), Positives = 240/504 (47%), Gaps = 35/504 (6%)
Query: 53 HAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPE--RNVVSWTAMISGYAQNG 110
HA I+T+G+ + L+ +I Y+K G + SARK FD P+ R++V+W A++S +A
Sbjct: 649 HARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHADKA 708
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
D +F + RS V A + T + + C + G K ++FV
Sbjct: 709 RD--GFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAG 766
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
AL+++YAK G I +A +LF+ + +DVV WN M+ G ++ LF R G++P
Sbjct: 767 ALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRP 826
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
D TL ++ R ++K N L L + A YG+ +
Sbjct: 827 DDVTLCTLAR-----------------VVK---SKQNVLEWQLKQLKA-YGT--KLFMYD 863
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
+D+I+ +S F + + EA D F DMI ++ D + +ML++ A + L
Sbjct: 864 DDDDGSDVIAWNKTLSWFLQ-RGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCL 922
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
LG+QIH + +VGN LI+MY K+G ++ A F +M + +++SW ++I+G
Sbjct: 923 ELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGC 982
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
A G ++ ++ + G++P+ T S+L ACS G C K ++
Sbjct: 983 ALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLD 1042
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
+ + ++D++++ G++E A + + AS W+A++ + G+ A L+
Sbjct: 1043 SFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLAS-WNAMMHGYIVSGDFP----KALRLY 1097
Query: 531 DM--EPEKSVNYVVLSNIYTAAGA 552
+ E + N + L+N AAG
Sbjct: 1098 ILMQESGERANQITLANAAKAAGG 1121
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 215/427 (50%), Gaps = 8/427 (1%)
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
+V++W +S + Q G A+ F M+ S V + T+ L A + L+ G+ I
Sbjct: 870 DVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIH 929
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND 214
G + + + + V + L+++Y K G + A +F ++ D+VSWN MI G A+ G +
Sbjct: 930 GIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEE 989
Query: 215 DSFWLFRSMMRQGMKPDCFTLGSILRASV---GGIELMKISQIHDLIIKLGLESSNKLTG 271
S +F ++R G+ PD FT+ S+LRA GG L +QIH +K G+ + ++
Sbjct: 990 CSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLA--TQIHACAMKAGVVLDSFVST 1047
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
+LIDVY+K G + A L+ + D+ S A++ G+ + K A L+ M
Sbjct: 1048 TLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPK-ALRLYILMQESGER 1106
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
+ + L + L G+QI A K + D V + ++DMY K GE+ A R
Sbjct: 1107 ANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRI 1166
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLT 451
F+E+ + ++WT++I+G ++G A+ Y M+ + P++ TF +L+ ACS
Sbjct: 1167 FNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTAL 1226
Query: 452 CEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
+G ++ + + K + +VD++A+ G +E A + ++ N AS W+A++
Sbjct: 1227 EQGRQIHANTV-KLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIAS-WNAMIV 1284
Query: 512 ACSIYGN 518
+ +GN
Sbjct: 1285 GLAQHGN 1291
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/484 (23%), Positives = 219/484 (45%), Gaps = 29/484 (5%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T + + C+ + A +H + + G + ++ ++ ++ YAK G + AR FD M
Sbjct: 729 TLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGM 788
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
R+VV W M+ Y G + ALL+FS R+G+R + T + R + + +
Sbjct: 789 GLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQ 848
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ Q L Y ++ + + DV++WN + +G
Sbjct: 849 LKQ------------------LKAYGT-----KLFMYDDDDDGSDVIAWNKTLSWFLQRG 885
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLGLESSNKLT 270
++ F M+ + D T ++ + V G+ +++ QIH ++++ GL+ +
Sbjct: 886 ETWEAVDCFVDMINSRVACDGLTF-VVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVG 944
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
LI++Y K GS+ A ++ M + D++S +ISG A + + +F D++ +
Sbjct: 945 NCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCAL-SGLEECSVGMFVDLLRGGL 1003
Query: 331 GIDDVILCLMLNICANV-ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
D + +L C+++ +L QIHA A K D+ V LID+Y+KSG++ +A
Sbjct: 1004 LPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAE 1063
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
F ++ SW +++ GY G +A+ LY M+ G N +T + A
Sbjct: 1064 FLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLV 1123
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
+G ++ ++ + L S V+D++ + G++ESA + ++ P W+ +
Sbjct: 1124 GLKQGKQIQAVVVKRGFNLDLFV-ISGVLDMYLKCGEMESARRIFNEIP-SPDDVAWTTM 1181
Query: 510 LGAC 513
+ C
Sbjct: 1182 ISGC 1185
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 5/207 (2%)
Query: 237 SILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT 296
SILR ++ +L + H I+ G LT +LI +Y+K GS+ SA +L+ + T
Sbjct: 631 SILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDT 690
Query: 297 --DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGR 354
D+++ A++S A + +++ F LF+ + + L + +C AS +
Sbjct: 691 SRDLVTWNAILSAHA---DKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAE 747
Query: 355 QIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG 414
+H +A K +D V AL+++YAK G I +A FD MG ++V+ W ++ Y G
Sbjct: 748 SLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTG 807
Query: 415 YGHEAIELYKKMKHEGMVPNDVTFLSL 441
+EA+ L+ + G+ P+DVT +L
Sbjct: 808 LEYEALLLFSEFNRTGLRPDDVTLCTL 834
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 192/549 (34%), Positives = 307/549 (55%), Gaps = 12/549 (2%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPE-- 93
LL I ++ + A IH II N Y S L +I YAK G + A F
Sbjct: 148 LLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHF 207
Query: 94 RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMI 153
+ +V+WT++I+ + AL +F+ M SG NQFT+SS L A A + G+ +
Sbjct: 208 KTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQL 267
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN 213
I K F N+FV +AL+D+YAKC + A +F+++ +++VSWN+MI G
Sbjct: 268 HSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLY 327
Query: 214 DDSFWLFRSMMRQ-GMKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGLESSNKLT 270
D + +F+ ++R+ + P+ ++ S+L A ++GG+ + Q+H +++K GL +
Sbjct: 328 DRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGR--QVHGVVVKYGLVPLTYVM 385
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
SL+D+Y K +L++ + D+++ L+ GF ++D +EA + F ++++
Sbjct: 386 NSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKF-EEACNYF--WVMRRE 442
Query: 331 GI--DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
GI D+ +L+ A++A+L+ G IH K + + +LI MYAK G + DA
Sbjct: 443 GILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDA 502
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ F+ + D NVISWT++I+ Y HG ++ IEL++ M EG+ P+ VTF+ +L ACSHT
Sbjct: 503 YQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHT 562
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
G EG F M + + P EH++C+VDL R G L+ A I M +KPT S+W A
Sbjct: 563 GRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGA 622
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+LGAC YGN +G AA LF+MEP NYV+L+N+ T +G + A + R+LM +
Sbjct: 623 LLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGV 682
Query: 569 RKNPGYSFL 577
RK PG S++
Sbjct: 683 RKEPGCSWI 691
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 138/467 (29%), Positives = 234/467 (50%), Gaps = 20/467 (4%)
Query: 15 QALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVI 72
QAL + C + T+ S+L +H+ I +G+++N+ + T ++
Sbjct: 228 QALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALV 287
Query: 73 IFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS-GVRANQ 131
YAK D+ SA + FD+MPERN+VSW +MI G+ N + A+ VF +LR V N+
Sbjct: 288 DMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNE 347
Query: 132 FTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER 191
+ SS L ACA M L GR + G + K V +V ++L+D+Y KC + ++ LF+
Sbjct: 348 VSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQC 407
Query: 192 IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI 251
+ +DVV+WN ++ G +++ F M R+G+ PD + ++L +S L +
Sbjct: 408 VGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQG 467
Query: 252 SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD 311
+ IHD IIKLG + + GSLI +YAK GS+ AYQ++ + ++IS TA+IS +
Sbjct: 468 TAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLH 527
Query: 312 DNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAV 371
+ + +LF+ M+ + + V +L+ C++ + G A + +D
Sbjct: 528 GC-ANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGL---AHFNSMKKIHDMNP 583
Query: 372 GN----ALIDMYAKSGEIADANRAFDEMGDKNVIS-WTSLIAGYAKHG---YGHEAIELY 423
G ++D+ ++G + +A R + M K S W +L+ K+G G EA E
Sbjct: 584 GPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERL 643
Query: 424 KKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM-INKYRILP 469
+M E P + L+ + C+ +G E E+ M +N R P
Sbjct: 644 FEM--EPYNPGNYVLLANM--CTRSGRLEEANEVRRLMGVNGVRKEP 686
>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Brachypodium distachyon]
Length = 734
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 175/517 (33%), Positives = 290/517 (56%), Gaps = 2/517 (0%)
Query: 63 SNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAM 122
SN+ +ST ++ Y K+G + A+ FD MP RN VSW AM++GYA + A +F M
Sbjct: 151 SNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQM 210
Query: 123 L-RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
L + N+F ++ L A + L G + G + K V + V+++L+ +YAK G
Sbjct: 211 LGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVENSLVTMYAKAGC 270
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
++ A+ +FE + ++ ++W+AMI G + G + + +F M G P FTL +L A
Sbjct: 271 MDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVLNA 330
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC 301
LM+ Q H L++KLG E + +L+D+YAK G I A + + + DI+
Sbjct: 331 CSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELDIVLW 390
Query: 302 TALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF 361
TA+++G ++ ++A L+ M + + + + + +L CA +A+L G+Q+H
Sbjct: 391 TAMVTGHVQNGEF-EQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLHTQIL 449
Query: 362 KYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIE 421
K+ A+VG+AL MY+K G + D F M ++VI+W S+I+G++++G G++AI
Sbjct: 450 KFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRGNDAIN 509
Query: 422 LYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLF 481
L+++MK EG P+ VTF+++L ACSH GL GW F MI Y + PR +H++C+VD+
Sbjct: 510 LFEEMKLEGTAPDPVTFINVLCACSHMGLVDRGWTYFRSMIKDYGLTPRLDHYACMVDIL 569
Query: 482 ARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYV 541
+R G L A + I + I LW +LGAC + +G A L D+ S Y+
Sbjct: 570 SRAGMLSEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEKLMDLGTGDSAAYI 629
Query: 542 VLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+LSNIY A W++ + R LM+ + K+PG S+++
Sbjct: 630 LLSNIYAAQRKWNDVERVRYLMKLVGVSKDPGCSWVE 666
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 137/492 (27%), Positives = 256/492 (52%), Gaps = 15/492 (3%)
Query: 47 RQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVL--SARKAFDRMP--ERNVVSWTAM 102
R +HA + +G S+ +S +I FY+ + +A F +P R+V SW ++
Sbjct: 29 RDGEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSL 88
Query: 103 ISGYAQNGYDENALLVFSAMLRSG-VRANQFTYSSALRACARMRWLQGGRMIQG-SIQKG 160
++ + + AL F +ML S + + ++++A A AR G ++ + +
Sbjct: 89 LNPLSHH-RPLAALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAVVHALACKLP 147
Query: 161 RFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLF 220
N+FV +ALL++Y K G I DA ++F+ + ++ VSW AM+ G A + + ++F LF
Sbjct: 148 SASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELF 207
Query: 221 RSMMRQ-GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAK 279
R M+ + + + F ++L A + L Q+H L++K G+ + SL+ +YAK
Sbjct: 208 RQMLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVENSLVTMYAK 267
Query: 280 YGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCL 339
G + +A+ ++ S + + I+ +A+I+G++++ N ++ A +F M + L
Sbjct: 268 AGCMDAAFHVFESSKERNSITWSAMITGYSQNGN-AESAVRMFSQMHAAGFPPTEFTLVG 326
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN 399
+LN C++V +L G+Q H K V +AL+DMYAK G I DA F++ + +
Sbjct: 327 VLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELD 386
Query: 400 VISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFT 459
++ WT+++ G+ ++G +A+ LY +M EG+ PN +T SLL AC+ G +L T
Sbjct: 387 IVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLHT 446
Query: 460 DMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNT 519
++ K+ A S + ++++ G LE + R+M + + W++I+ S G
Sbjct: 447 QIL-KFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIA-WNSIISGFSQNGRG 504
Query: 520 SLGELAARNLFD 531
+ A NLF+
Sbjct: 505 N----DAINLFE 512
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 165/302 (54%), Gaps = 1/302 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H ++ +G + + ++ YAK G + +A F+ ERN ++W+AMI+GY+QNG
Sbjct: 242 VHGLVVKDGMVGFVSVENSLVTMYAKAGCMDAAFHVFESSKERNSITWSAMITGYSQNGN 301
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
E+A+ +FS M +G +FT L AC+ + L G+ G + K F ++VKSA
Sbjct: 302 AESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSA 361
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+D+YAKCG I DA F + D+V W AM+ G G + + L+ M ++G+ P+
Sbjct: 362 LVDMYAKCGCIGDAKECFNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPN 421
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
T+ S+LRA G L Q+H I+K G + +L +Y+K G++ ++R
Sbjct: 422 TLTITSLLRACAGLAALEPGKQLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFR 481
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
M D+I+ ++ISGF++ + +A +LF++M L+ D V +L C+++ ++
Sbjct: 482 RMPHRDVIAWNSIISGFSQ-NGRGNDAINLFEEMKLEGTAPDPVTFINVLCACSHMGLVD 540
Query: 352 LG 353
G
Sbjct: 541 RG 542
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 139/263 (52%), Gaps = 1/263 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T + +L C D + H ++ G+E +++ + ++ YAK G + A++ F++
Sbjct: 323 TLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQF 382
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
E ++V WTAM++G+ QNG E AL++++ M + GV N T +S LRACA + L+ G+
Sbjct: 383 SELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGK 442
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ I K F V SAL +Y+KCG +ED ++F R+ +DV++WN++I G + G
Sbjct: 443 QLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNG 502
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLT 270
+D+ LF M +G PD T ++L A S G+ + +I GL
Sbjct: 503 RGNDAINLFEEMKLEGTAPDPVTFINVLCACSHMGLVDRGWTYFRSMIKDYGLTPRLDHY 562
Query: 271 GSLIDVYAKYGSIRSAYQLYRSM 293
++D+ ++ G + A S+
Sbjct: 563 ACMVDILSRAGMLSEAKDFIESI 585
>gi|413946224|gb|AFW78873.1| hypothetical protein ZEAMMB73_227843 [Zea mays]
Length = 778
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 189/558 (33%), Positives = 310/558 (55%), Gaps = 9/558 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
++ ++ +S+L C ++ E +H ++ G S ++L ++ Y K GD+ S+
Sbjct: 218 VNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKFGDLESSMHV 277
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F+ M E+N VSW + I +A G+ E+ L +F M V T SS L A + +
Sbjct: 278 FNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSLLPALVDLGYF 337
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ + G + ++F+ + L+D+YAK G E A +FE IE ++VVSWNAMI L
Sbjct: 338 HLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNVVSWNAMIANL 397
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS--VGGIELMKISQIHDLIIKLGLES 265
G ++F L M + G P+ FTL ++L A V +++ K QIH I+ L S
Sbjct: 398 TQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGK--QIHAWSIRRSLMS 455
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLY-RSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
++ +LIDVYAK G + A ++ RS + D +S LI G+++ E+ LF+
Sbjct: 456 DLFVSNALIDVYAKCGQLNLARYIFDRS--EKDGVSYNTLIVGYSQSQC-CFESLHLFQQ 512
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M L + D V L+ C+N+++ G++IH K + N+L+D+Y K G
Sbjct: 513 MRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLDSHPFLANSLLDVYTKGGM 572
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ A++ F+ + K+V SW ++I GY HG A EL+ MK +G+ + V+++++L
Sbjct: 573 LDTASKIFNRITQKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGIEYDHVSYIAVLSV 632
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
CSH GL G + F+ MI + I P+ H++C+VDL R GQL + +IR M + +
Sbjct: 633 CSHGGLVDRGKKYFSQMIAQ-NIKPQQMHYACMVDLLGRAGQLSESAEIIRNMPFRANSD 691
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
+W A+LG+C I+G+ L LAA +LF+++PE S Y +L N+Y+ +G W+ A +KLM+
Sbjct: 692 VWGALLGSCRIHGDIELARLAAEHLFELKPENSGYYTLLRNMYSESGMWNEANGVKKLMK 751
Query: 565 ERSLRKNPGYSFLQSSKK 582
R ++KNP YS++QS K
Sbjct: 752 SRKVQKNPAYSWVQSGNK 769
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 148/496 (29%), Positives = 260/496 (52%), Gaps = 19/496 (3%)
Query: 71 VIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
++ FYA G AR+ FD MP R+VVSW +++S NG E+A M+RSGV N
Sbjct: 160 LVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSALLTNGMLEDAKRAVVGMMRSGVPVN 219
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE 190
+ S L AC R G + G + K + + +AL+D+Y K G +E + +F
Sbjct: 220 VASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKFGDLESSMHVFN 279
Query: 191 RIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV--GGIEL 248
++ K+ VSWN+ IG A GF++D +FR M + P TL S+L A V G L
Sbjct: 280 GMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSLLPALVDLGYFHL 339
Query: 249 MKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGF 308
K ++H I+ +ES + +L+D+YAK+G A ++ ++ +++S A+I+
Sbjct: 340 GK--ELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNVVSWNAMIANL 397
Query: 309 ARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYD 368
++ + EAF L +M + L +L C+ VAS+ +G+QIHA++ + D
Sbjct: 398 TQNGAEA-EAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIRRSLMSD 456
Query: 369 AAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKH 428
V NALID+YAK G++ A FD +K+ +S+ +LI GY++ E++ L+++M+
Sbjct: 457 LFVSNALIDVYAKCGQLNLARYIFDR-SEKDGVSYNTLIVGYSQSQCCFESLHLFQQMRL 515
Query: 429 EGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFS-CVVDLFARRGQL 487
G+ + V+F+ L ACS+ +G E+ ++ R+L + ++D++ + G L
Sbjct: 516 AGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVK--RLLDSHPFLANSLLDVYTKGGML 573
Query: 488 ESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKS-----VNYVV 542
++A + ++ K AS W+ ++ ++G + A LFD+ + V+Y+
Sbjct: 574 DTASKIFNRITQKDVAS-WNTMILGYGMHGQIDV----AFELFDLMKDDGIEYDHVSYIA 628
Query: 543 LSNIYTAAGAWDNARK 558
+ ++ + G D +K
Sbjct: 629 VLSVCSHGGLVDRGKK 644
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/455 (27%), Positives = 225/455 (49%), Gaps = 20/455 (4%)
Query: 47 RQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP--ERNVVSWTAMIS 104
R+AH A +++ ++ L+ +++ YA + D+ SA P R+ W ++
Sbjct: 31 RRAHA--ASLVSGALTASFPLAGALLLSYAALPDIPSAHLILRHHPFRLRSAFLWNSLSR 88
Query: 105 GYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ----GGRMIQGSIQKG 160
A AL V++ M+RSGVR + T+ AL A A + + G + ++++G
Sbjct: 89 ALASAALPCEALRVYNRMVRSGVRPDDRTFPFALHAAAAVAQAEHPAKGAELHAAALRRG 148
Query: 161 RFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLF 220
+ ++F + L+ YA CG DA +F+ + +DVVSWN+++ L G +D+
Sbjct: 149 LLLADVFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSALLTNGMLEDAKRAV 208
Query: 221 RSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKY 280
MMR G+ + +L SIL A + +H L++K GL S L +L+D+Y K+
Sbjct: 209 VGMMRSGVPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKF 268
Query: 281 GSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLM 340
G + S+ ++ M + + +S + I FA H ++ ++F+ M + V L +
Sbjct: 269 GDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFH-EDVLEMFRLMSEHDVTPGSVTLSSL 327
Query: 341 LNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNV 400
L ++ +LG+++H ++ + D + N L+DMYAK G A+ F+ + +NV
Sbjct: 328 LPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNV 387
Query: 401 ISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT-----GLTCEGW 455
+SW ++IA ++G EA L +M+ G PN T ++LL ACS G W
Sbjct: 388 VSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAW 447
Query: 456 ELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA 490
+ +++ + + ++D++A+ GQL A
Sbjct: 448 SIRRSLMSDLFV------SNALIDVYAKCGQLNLA 476
>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
Length = 1084
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 181/559 (32%), Positives = 288/559 (51%), Gaps = 31/559 (5%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T SLL C ++ +H+++ G S+ + ++ Y K GDV +A F
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIF 302
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ NVV W ++ + Q + +F M +G+R NQFTY LR C +
Sbjct: 303 NLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEID 362
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G I K F +++V L+D+Y+K GW+E A + E ++ KDVVSW +MI G
Sbjct: 363 LGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYV 422
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
+ D+ F+ M + G+ PD L S + G + + QIH + G
Sbjct: 423 QHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVS 482
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +L+++YA+ G IR A+ + + D I+ L+SGFA+ H +EA +F M +
Sbjct: 483 IWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLH-EEALKVF--MRMD 539
Query: 329 KMGIDDVILCLM--LNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ G+ + + L+ AN+A + G+QIHA K S++ VGNALI +Y K G
Sbjct: 540 QSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFE 599
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
DA F EM ++N +SW ++I ++HG G EA++ + +MK EG+
Sbjct: 600 DAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDFFDQMKKEGL--------------- 644
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
F M +KY I PR +H++CV+D+F R GQL+ A + +M I A +W
Sbjct: 645 ---------SYFKSMSDKYGIRPRPDHYACVIDIFGRAGQLDRAKKFVEEMPIAADAMVW 695
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
+L AC ++ N +GELAA++L ++EP S +YV+LSN Y G W N + RK+M +R
Sbjct: 696 RTLLSACKVHKNIEVGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMRDR 755
Query: 567 SLRKNPGYSFLQSSKKNIL 585
+RK PG S+++ KN++
Sbjct: 756 GVRKEPGRSWIEV--KNVV 772
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 179/596 (30%), Positives = 301/596 (50%), Gaps = 49/596 (8%)
Query: 30 PSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
P+ Y+ S+L C + Q +HA G+ S + +I Y + G A +
Sbjct: 141 PTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERV 200
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F MP R+ V++ +ISG+AQ + E+AL +F M SG+ + T SS L ACA + L
Sbjct: 201 FYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDL 260
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
Q G + + K + ++ +LLDLY KCG +E A ++F R +VV WN ++ +
Sbjct: 261 QKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLIL--V 318
Query: 208 AMQGFND--DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
A ND SF LF M G++P+ FT ILR E+ QIH L +K G ES
Sbjct: 319 AFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFES 378
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
++G LID+Y+KYG + A ++ + + D++S T++I+G+ + + + K+A FK+M
Sbjct: 379 DMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHE-YCKDALAAFKEM 437
Query: 326 ILKKMGI--DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
+K GI D++ L ++ CA + ++ G QIHA + S D ++ NAL+++YA+ G
Sbjct: 438 --QKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCG 495
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
I +A +F+E+ K+ I+W L++G+A+ G EA++++ +M G+ N TF+S L
Sbjct: 496 RIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALS 555
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
A ++ +G ++ +I E + ++ L+ + G E A +M+ +
Sbjct: 556 ASANLAEIKQGKQIHARVIKTGHSF-ETEVGNALISLYGKCGSFEDAKMEFSEMSERNEV 614
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFD-MEPE----------------KSVNYVVLSNI 546
S W+ I+ +CS +G L A + FD M+ E + +Y + +I
Sbjct: 615 S-WNTIITSCSQHGRG----LEALDFFDQMKKEGLSYFKSMSDKYGIRPRPDHYACVIDI 669
Query: 547 YTAAGAWDNARKT-------------RKLMEERSLRKNPGYSFLQSSKKNILLLEP 589
+ AG D A+K R L+ + KN L + K++L LEP
Sbjct: 670 FGRAGQLDRAKKFVEEMPIAADAMVWRTLLSACKVHKNIEVGEL--AAKHLLELEP 723
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 154/527 (29%), Positives = 270/527 (51%), Gaps = 12/527 (2%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IHA IT G + + +I Y+K G VL AR+ F+ + R+ VSW AM+SGYAQNG
Sbjct: 64 IHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
E AL ++ M R+GV + SS L +C + GR + K F FV +A
Sbjct: 124 GEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNA 183
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+ LY +CG A +F + +D V++N +I G A + + +F M G+ PD
Sbjct: 184 LITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPD 243
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
C T+ S+L A +L K +Q+H + K G+ S + GSL+D+Y K G + +A ++
Sbjct: 244 CVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFN 303
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
+T+++ ++ F + ++ +K +F+LF M + + +L C ++
Sbjct: 304 LGNRTNVVLWNLILVAFGQINDLAK-SFELFCQMQTAGIRPNQFTYPCILRTCTCTGEID 362
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
LG QIH+ + K D V LIDMY+K G + A R + + +K+V+SWTS+IAGY
Sbjct: 363 LGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYV 422
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM-INKYRILPR 470
+H Y +A+ +K+M+ G+ P+++ S + C+ +G ++ + ++ Y
Sbjct: 423 QHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYS--GD 480
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
++ +V+L+AR G++ A++ ++ K + W+ G S + + L E A +
Sbjct: 481 VSIWNALVNLYARCGRIREAFSSFEEIEHKDEIT-WN---GLVSGFAQSGLHEEALKVFM 536
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNAR-KTRKLMEERSLRKNPGYSF 576
M+ + V + V + + + + + A K K + R ++ G+SF
Sbjct: 537 RMD-QSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKT--GHSF 580
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 194/422 (45%), Gaps = 56/422 (13%)
Query: 192 IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ--GMKPDCFTLGSILRASVG-GIEL 248
+ R+ S + G Q LF RQ G+ P LRA G G
Sbjct: 1 MTRRGAASLGWSLAGFLAQEDPAKVLSLFADKARQHGGLGP--LDFACALRACRGNGRRW 58
Query: 249 MKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGF 308
+ +IH I GL + LID+Y+K G + A +++ + D +S A++SG+
Sbjct: 59 QVVPEIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGY 118
Query: 309 ARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYD 368
A+ + +EA L++ M + +L +L+ C GR +HA +K +
Sbjct: 119 AQ-NGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSE 177
Query: 369 AAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKH 428
VGNALI +Y + G A R F +M ++ +++ +LI+G+A+ +G A+E++++M+
Sbjct: 178 TFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQS 237
Query: 429 EGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF--SCVVDLFARRGQ 486
G+ P+ VT SLL AC+ G +G +L + + ++ +++ ++DL+ + G
Sbjct: 238 SGLSPDCVTISSLLAACASLGDLQKGTQLHSYL---FKAGMSSDYIMEGSLLDLYVKCGD 294
Query: 487 LESA--------------YNMI----RQMN----------------IKPTASLWSAILGA 512
+E+A +N+I Q+N I+P + IL
Sbjct: 295 VETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRT 354
Query: 513 CSIYGNTSLGE----LAARNLFDMEPEKSVNYV--VLSNIYTAAGAWDNARKTRKLMEER 566
C+ G LGE L+ + F+ S YV VL ++Y+ G + AR+ ++++E+
Sbjct: 355 CTCTGEIDLGEQIHSLSVKTGFE-----SDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK 409
Query: 567 SL 568
+
Sbjct: 410 DV 411
>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 187/533 (35%), Positives = 291/533 (54%), Gaps = 11/533 (2%)
Query: 58 TNGY------ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
T+GY E++ + +I Y K + ARK FD M RN+VSWT MI+GY QN
Sbjct: 237 THGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSC 296
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
D A+ +F + + G + + F +S L +C + + GR + K + +VK++
Sbjct: 297 DAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNS 356
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+D+YAKC + +A +FE + D +S+NAMI G + G + +F M +KP
Sbjct: 357 LIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPS 416
Query: 232 CFTLGSIL--RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
T S+L +S IEL K QIH LI+K G SLIDVY+K+ + A +
Sbjct: 417 PLTFVSLLGVSSSQSAIELSK--QIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAV 474
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ M D++ A+I G A+++ +EA LF + + + ++ ++ + + + S
Sbjct: 475 FNLMHNRDMVIWNAMIFGLAQNEQ-GEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVS 533
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
+ G+Q HA K + D V NALIDMYAK G I + F+ K+VI W S+I+
Sbjct: 534 MFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMIST 593
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
YA+HG EA+ +++ M G+ PN VTF+ +L AC+H GL EG F M KY I P
Sbjct: 594 YAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEP 653
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
EH++ VV+LF R G+L +A I +M I+P A++W ++L AC ++GN +G A
Sbjct: 654 GTEHYASVVNLFGRSGKLHAAKEFIERMPIEPAAAVWRSLLSACHLFGNVEIGRYATEMA 713
Query: 530 FDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+P S V++SNIY + G W +A+K R+ M+ + K PGYS+++ K+
Sbjct: 714 LLADPADSGPSVLMSNIYASRGLWSDAQKLRQGMDCAGVVKEPGYSWIEVMKE 766
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 150/528 (28%), Positives = 265/528 (50%), Gaps = 46/528 (8%)
Query: 30 PSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
P+ ++ S L+ C +A +H + G + N+++ T +I YAKVG + +A
Sbjct: 112 PNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLV 171
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD +P +N V+WTA+I+GY+Q G AL +F M GVR ++F +SA+ AC+ + +L
Sbjct: 172 FDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGFL 231
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+GGR G + + V +AL+DLY KC + A LF+ +E +++VSW MI G
Sbjct: 232 EGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGY 291
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
+ ++ +F + ++G +PD F SIL + + + Q+H IK LES
Sbjct: 292 MQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDE 351
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ SLID+YAK + A ++ ++ + D IS A+I G++R + + A D+F M
Sbjct: 352 YVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAG-AIDVFSKMRY 410
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ + +L + ++ +++ L +QIH K +S D G++LID+Y+K + D
Sbjct: 411 CSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVED 470
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS- 446
A F+ M +++++ W ++I G A++ G EA++L+ +++ G+ PN+ TF++L+ S
Sbjct: 471 AKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVAST 530
Query: 447 ----------------------------------HTGLTCEGWELFTDMINKYRILPRAE 472
G EG LF + K I
Sbjct: 531 LVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVIC---- 586
Query: 473 HFSCVVDLFARRGQLESAYNMIRQM---NIKPTASLWSAILGACSIYG 517
++ ++ +A+ GQ E A + R M ++P + +L AC+ G
Sbjct: 587 -WNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACAHAG 633
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 135/409 (33%), Positives = 229/409 (55%), Gaps = 3/409 (0%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
LL + R L HA + G +L L+ ++ Y+K+G V AR+ FDRMP +N
Sbjct: 17 LLSCLAGDRLHRLLPLAHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKN 76
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRS--GVRANQFTYSSALRACARMRWLQGGRMI 153
+VSW + IS +AQ+G +E+A+ +F+A R+ G N+F +SALRACA+ R + G+ +
Sbjct: 77 LVSWGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQV 136
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN 213
G + N++V +AL++LYAK G I+ A ++F+ + K+ V+W A+I G + G
Sbjct: 137 HGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQG 196
Query: 214 DDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSL 273
+ LF M G++PD F L S + A L Q H ++ +E+ + +L
Sbjct: 197 GVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINAL 256
Query: 274 IDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGID 333
ID+Y K + A +L+ M +++S T +I+G+ ++ + EA +F + + D
Sbjct: 257 IDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDA-EAMAMFWQLSQEGWQPD 315
Query: 334 DVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFD 393
+LN C ++A++ GRQ+HA A K D V N+LIDMYAK + +A F+
Sbjct: 316 VFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFE 375
Query: 394 EMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
+ + + IS+ ++I GY++ G AI+++ KM++ + P+ +TF+SLL
Sbjct: 376 ALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLL 424
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 137/265 (51%), Gaps = 1/265 (0%)
Query: 30 PSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFD 89
P T++SLL + A + IH I+ +G +L+ + +I Y+K V A+ F+
Sbjct: 417 PLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFN 476
Query: 90 RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG 149
M R++V W AMI G AQN E A+ +F+ + SG+ N+FT+ + + + + +
Sbjct: 477 LMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFH 536
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
G+ I K + V +AL+D+YAKCG+I++ +LFE KDV+ WN+MI A
Sbjct: 537 GQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQ 596
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV-GGIELMKISQIHDLIIKLGLESSNK 268
G +++ ++FR M G++P+ T +L A G+ + + K +E +
Sbjct: 597 HGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTE 656
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSM 293
S+++++ + G + +A + M
Sbjct: 657 HYASVVNLFGRSGKLHAAKEFIERM 681
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 118/245 (48%), Gaps = 4/245 (1%)
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
L L+ Y+K G +R A +L+ M +++S + IS A+ ++A LF
Sbjct: 48 LANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQH-GCEEDAVALFAAFQRA 106
Query: 329 KMG--IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
G ++ +L L CA +++ G+Q+H A + + VG ALI++YAK G I
Sbjct: 107 SGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCID 166
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A FD + KN ++WT++I GY++ G G A+EL+ KM +G+ P+ S + ACS
Sbjct: 167 AAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSACS 226
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
G EG + + A + ++DL+ + +L A + M + S
Sbjct: 227 ALGFL-EGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWT 285
Query: 507 SAILG 511
+ I G
Sbjct: 286 TMIAG 290
>gi|357481223|ref|XP_003610897.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512232|gb|AES93855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 774
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 195/596 (32%), Positives = 323/596 (54%), Gaps = 34/596 (5%)
Query: 11 GQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGY---ESNLHL 67
G L++AL + P L Y L C KK +Q +H H I N + ++++ L
Sbjct: 61 GNLEKALSLVYTNPSLTLQ--DYAFLFHACAQKKYIKQGMALH-HYILNKHPKIQNDIFL 117
Query: 68 STKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV 127
+ ++ Y K G + AR FD+MP RN VSWT ++SGYAQ G +FS ML +
Sbjct: 118 TNNLLNMYCKCGHLDYARYLFDQMPRRNFVSWTVLVSGYAQFGLIRECFALFSGML-ACF 176
Query: 128 RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG------- 180
R N+F ++S L AC ++ G + + K +++V +AL+ +Y+KC
Sbjct: 177 RPNEFAFASVLCACEEQD-VKYGLQVHAAALKMSLDFSVYVANALITMYSKCSGGFGGSC 235
Query: 181 --WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
+DAW++F+ +E ++++SWN+MI G +G D + LF M G++ + TL +
Sbjct: 236 DQTTDDAWMVFKSMEYRNLISWNSMISGFQFRGLGDKAIGLFAHMYCNGIRFNSTTLLGV 295
Query: 239 LRA---------SVGGIELMK-ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGS-IRSAY 287
L + + +K Q+H L +K GL S ++ +L+ YA G I +
Sbjct: 296 LSSLNHCMSTSDDINNTHHLKNCFQLHCLTVKSGLISEVEVVTALVKSYADLGGHISDCF 355
Query: 288 QLY-RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICAN 346
+L+ + + DI+S TA+IS FA D ++AF LF + + +D + L CA
Sbjct: 356 KLFLDTSGEHDIVSWTAIISVFAERD--PEQAFLLFCQLHRENFVLDRHTFSIALKACAY 413
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
+ ++H+ K D V NALI Y +SG +A + + F EMG +++SW S+
Sbjct: 414 FVTEKNATEVHSQVMKQGFHNDTVVSNALIHAYGRSGSLALSEQVFTEMGCHDLVSWNSM 473
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYR 466
+ YA HG +A++L+K+M + P+ TF++LL ACSH GL EG ++F M +
Sbjct: 474 LKSYAIHGRAKDALDLFKQMD---VHPDSATFVALLAACSHAGLVEEGTQIFNSMTESHG 530
Query: 467 ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAA 526
I P +H+SC+VDL+ R G++ A +IR+M +KP + +WS++LG+C +G L +LAA
Sbjct: 531 IAPHLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGEADLAKLAA 590
Query: 527 RNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
++P+ S+ Y+ +SNIY++ G++ A RK M + +RK PG S+++ K+
Sbjct: 591 DKFKVLDPKNSLAYIQMSNIYSSGGSFIEAGLIRKEMRDSKVRKRPGLSWVEVGKQ 646
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 158/447 (35%), Positives = 272/447 (60%), Gaps = 3/447 (0%)
Query: 134 YSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE 193
Y + L C R ++ G+ + + K ++ ++++++ L+ LY KC + DA +F+ +
Sbjct: 93 YDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMP 152
Query: 194 RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ 253
+K+VVSW AMI + +GF ++ LF M+R +P+ FT +IL + G + Q
Sbjct: 153 QKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQ 212
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN 313
IH + IK ES + SL+D+YAK G I A+ ++ + + D+++CTA+ISG+A+
Sbjct: 213 IHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQM-G 271
Query: 314 HSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN 373
+EA LF+ + ++ M + V +L + +A+LN G+Q+H+ + + N
Sbjct: 272 LDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLN 331
Query: 374 ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV- 432
+LIDMY+K G + A R FD M ++ ISW +++ GY+KHG E +EL+K M+ E V
Sbjct: 332 SLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVK 391
Query: 433 PNDVTFLSLLFACSHTGLTCEGWELFTDMIN-KYRILPRAEHFSCVVDLFARRGQLESAY 491
P+ +T+L++L CSH L G E+F +M+N K I P H+ CVVDL R G++E A+
Sbjct: 392 PDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAF 451
Query: 492 NMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAG 551
+ I++M PTA++W ++LG+C ++ + +G + + L ++EPE + NYV+LSN+Y +AG
Sbjct: 452 DFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAG 511
Query: 552 AWDNARKTRKLMEERSLRKNPGYSFLQ 578
W++ R R LM+E+++ K PG S+++
Sbjct: 512 KWEDMRNIRDLMQEKAVTKEPGRSWVE 538
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/390 (32%), Positives = 214/390 (54%), Gaps = 9/390 (2%)
Query: 6 ANFKT----GQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGY 61
N KT GQLK+AL ++ + Y ++L C+ ++A R+ +H H+I Y
Sbjct: 63 PNLKTLCSSGQLKEAL-LQMAILGREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCY 121
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSA 121
+++L T++I+ Y K + AR+ FD MP++NVVSWTAMIS Y+Q G+ AL +F
Sbjct: 122 LPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVE 181
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
MLRS N FT+++ L +C + GR I K + ++FV S+LLD+YAK G
Sbjct: 182 MLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGR 241
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
I DA +F + +DVV+ A+I G A G ++++ LFR + +GM + T S+L A
Sbjct: 242 ICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTA 301
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC 301
G L Q+H +++ G S L SLID+Y+K G++ A +++ SM + IS
Sbjct: 302 LSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISW 361
Query: 302 TALISGFARDDNHSKEAFDLFKDMILK-KMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
A++ G+++ ++E +LFK M + K+ D + +L+ C++ ++G +I
Sbjct: 362 NAMLVGYSK-HGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNM 420
Query: 361 FKYQSSYDAAVGN--ALIDMYAKSGEIADA 388
+ + +G+ ++D+ ++G + +A
Sbjct: 421 VNGKDGIEPDIGHYGCVVDLLGRAGRVEEA 450
>gi|242084292|ref|XP_002442571.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
gi|241943264|gb|EES16409.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
Length = 698
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/532 (32%), Positives = 299/532 (56%), Gaps = 6/532 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+ + + +G N+ ++ ++ YAK G + AR+ FD MP RN VSW A+I+GYA++
Sbjct: 117 LQSFAVKSGLVDNVFSASALLDVYAKCGRLSDARRVFDGMPVRNTVSWNALIAGYAESRK 176
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
A+ +F M R + + T+++ L W + + G I K L V +A
Sbjct: 177 PAQAMELFLEMQRVELVPDDATFAALLATVEGPSWYSLMQQLHGKIAKYGSALGLVVLNA 236
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ-GMKP 230
+ Y++CG D+ +F+ I+ +D++SWN+M+G A G +D++ F MMR+ G++P
Sbjct: 237 AITAYSQCGAFADSRRIFDGIQSRDLISWNSMLGAYAYHGMDDEAMRFFVRMMRESGVQP 296
Query: 231 DCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGS---IRSA 286
D ++ S++ S G + + IH L++K+GLE + ++I +Y ++ + A
Sbjct: 297 DMYSFTSVVSVCSEHGCDDRQGRSIHSLVVKIGLEGVTHVCNAMIAMYTRFTENCMMEDA 356
Query: 287 YQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICAN 346
Y+ + S++ D +S ++++G++ S +A F+ M + + D+ L L C++
Sbjct: 357 YKCFDSLVFKDAVSWNSMLTGYSHH-GLSSDALRFFRFMRAENVSTDEFALSAALRSCSD 415
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
+A L LGRQ+H+ + S + V ++LI MY+K G + DA ++F+E + + W S+
Sbjct: 416 LAVLRLGRQVHSLVIQSGFSSNDFVSSSLIFMYSKCGMVGDARKSFEEADKGSSVPWNSM 475
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYR 466
+ GYA+HG +L+ +M + + VTF++LL A SH GL EG E+ M +Y+
Sbjct: 476 MFGYAQHGQAQTVTDLFSEMLDHKVPLDHVTFVALLTAYSHGGLVDEGSEILNSMETRYK 535
Query: 467 ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAA 526
I R EH++C VDL+ R GQL+ A +I M +P A +W +LGAC I+GN L A
Sbjct: 536 IPLRMEHYACGVDLYGRAGQLDKAKELIESMPFQPDAMVWMTLLGACRIHGNMELASDVA 595
Query: 527 RNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+LF EP + YV+LS++Y+ G W + +K+M+ R L K PG+S+++
Sbjct: 596 SHLFVAEPRQHSTYVLLSSMYSGRGMWSDRATVQKVMKNRGLSKVPGWSWIE 647
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 126/493 (25%), Positives = 234/493 (47%), Gaps = 15/493 (3%)
Query: 83 SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA 142
+AR+ FD +P + VSW ++++ + G +A + M G+ A+ F SALR+ A
Sbjct: 47 AARRVFDEIPRPDAVSWNSLLAAHVAAGAHRDAWRLLKDMHARGLTASTFALGSALRSAA 106
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
R + G +Q K V+N+F SALLD+YAKCG + DA +F+ + ++ VSWNA
Sbjct: 107 AARRPELGAQLQSFAVKSGLVDNVFSASALLDVYAKCGRLSDARRVFDGMPVRNTVSWNA 166
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
+I G A + LF M R + PD T ++L G + Q+H I K G
Sbjct: 167 LIAGYAESRKPAQAMELFLEMQRVELVPDDATFAALLATVEGPSWYSLMQQLHGKIAKYG 226
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
+ + I Y++ G+ + +++ + D+IS +++ +A EA F
Sbjct: 227 SALGLVVLNAAITAYSQCGAFADSRRIFDGIQSRDLISWNSMLGAYAY-HGMDDEAMRFF 285
Query: 323 KDMILKKMGI--DDVILCLMLNICANVASLN-LGRQIHAFAFKYQSSYDAAVGNALIDMY 379
M +++ G+ D ++++C+ + GR IH+ K V NA+I MY
Sbjct: 286 VRM-MRESGVQPDMYSFTSVVSVCSEHGCDDRQGRSIHSLVVKIGLEGVTHVCNAMIAMY 344
Query: 380 AKSGE---IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDV 436
+ E + DA + FD + K+ +SW S++ GY+ HG +A+ ++ M+ E + ++
Sbjct: 345 TRFTENCMMEDAYKCFDSLVFKDAVSWNSMLTGYSHHGLSSDALRFFRFMRAENVSTDEF 404
Query: 437 TFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF--SCVVDLFARRGQLESAYNMI 494
+ L +CS + G ++ + +I + F S ++ ++++ G + A
Sbjct: 405 ALSAALRSCSDLAVLRLGRQVHSLVIQSGF---SSNDFVSSSLIFMYSKCGMVGDARKSF 461
Query: 495 RQMNIKPTASLWSAILGACSIYGNT-SLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAW 553
+ + K ++ W++++ + +G ++ +L + L P V +V L Y+ G
Sbjct: 462 EEAD-KGSSVPWNSMMFGYAQHGQAQTVTDLFSEMLDHKVPLDHVTFVALLTAYSHGGLV 520
Query: 554 DNARKTRKLMEER 566
D + ME R
Sbjct: 521 DEGSEILNSMETR 533
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 136/272 (50%), Gaps = 9/272 (3%)
Query: 29 DPSTYMSLLQFCIDKKAE-RQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGD---VLSA 84
D ++ S++ C + + RQ IH+ ++ G E H+ +I Y + + + A
Sbjct: 297 DMYSFTSVVSVCSEHGCDDRQGRSIHSLVVKIGLEGVTHVCNAMIAMYTRFTENCMMEDA 356
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
K FD + ++ VSW +M++GY+ +G +AL F M V ++F S+ALR+C+ +
Sbjct: 357 YKCFDSLVFKDAVSWNSMLTGYSHHGLSSDALRFFRFMRAENVSTDEFALSAALRSCSDL 416
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
L+ GR + + + F N FV S+L+ +Y+KCG + DA FE ++ V WN+M+
Sbjct: 417 AVLRLGRQVHSLVIQSGFSSNDFVSSSLIFMYSKCGMVGDARKSFEEADKGSSVPWNSMM 476
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGI--ELMKISQIHDLIIKL 261
G A G LF M+ + D T ++L A S GG+ E +I + K+
Sbjct: 477 FGYAQHGQAQTVTDLFSEMLDHKVPLDHVTFVALLTAYSHGGLVDEGSEILNSMETRYKI 536
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
L + G +D+Y + G + A +L SM
Sbjct: 537 PLRMEHYACG--VDLYGRAGQLDKAKELIESM 566
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 4/178 (2%)
Query: 37 LQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNV 96
L+ C D R +H+ +I +G+ SN +S+ +I Y+K G V ARK+F+ + +
Sbjct: 410 LRSCSDLAVLRLGRQVHSLVIQSGFSSNDFVSSSLIFMYSKCGMVGDARKSFEEADKGSS 469
Query: 97 VSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGS 156
V W +M+ GYAQ+G + +FS ML V + T+ + L A + + G I S
Sbjct: 470 VPWNSMMFGYAQHGQAQTVTDLFSEMLDHKVPLDHVTFVALLTAYSHGGLVDEGSEILNS 529
Query: 157 IQKGRFVENLFVK--SALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGGLAMQG 211
++ R+ L ++ + +DLY + G ++ A L E + + D + W ++G + G
Sbjct: 530 MET-RYKIPLRMEHYACGVDLYGRAGQLDKAKELIESMPFQPDAMVWMTLLGACRIHG 586
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 5/143 (3%)
Query: 373 NALIDMYAKSGE---IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE 429
N L+ Y+ SG +A A R FDE+ + +SW SL+A + G +A L K M
Sbjct: 30 NQLLTAYSASGPGSGLAAARRVFDEIPRPDAVSWNSLLAAHVAAGAHRDAWRLLKDMHAR 89
Query: 430 GMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLES 489
G+ + S L + + G +L + + K ++ S ++D++A+ G+L
Sbjct: 90 GLTASTFALGSALRSAAAARRPELGAQLQSFAV-KSGLVDNVFSASALLDVYAKCGRLSD 148
Query: 490 AYNMIRQMNIKPTASLWSAILGA 512
A + M ++ T S W+A++
Sbjct: 149 ARRVFDGMPVRNTVS-WNALIAG 170
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 182/556 (32%), Positives = 305/556 (54%), Gaps = 7/556 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
+P T+ S+L + +HA I G S + + ++ YAK G V AR F
Sbjct: 156 NPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVF 215
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
RM R++VSW +++G NG D AL +F S + TYS+ + CA ++ L
Sbjct: 216 CRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLG 275
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGGL 207
R + S+ K F V +AL+D Y K G ++ A +F + ++VVSW AMI G
Sbjct: 276 LARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGC 335
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
G + LF M G+ P+ T +IL S QIH +IK E +
Sbjct: 336 IQNGDIPLAAALFSRMREDGVAPNDLTYSTILTVSEASFP----PQIHAQVIKTNYECTP 391
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ +L+ Y+K S A +++ + + D++S +A+++ +A+ + A + F M +
Sbjct: 392 TVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGD-CNGATNAFIKMTM 450
Query: 328 KKMGIDDVILCLMLNICANVAS-LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ ++ + ++ CA+ A+ ++LGRQ HA + K++ V +AL+ MYA+ G I
Sbjct: 451 HGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIE 510
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
+A F+ D++++SW S+++GYA+HGY +A++++++M+ EG+ + +TFLS++ C+
Sbjct: 511 NAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCA 570
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
H GL EG + F M+ Y I P +H++C+VDL++R G+L+ ++I M ++W
Sbjct: 571 HAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIW 630
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
A+LGAC ++ N LG+LAA L +EP S YV+LSNIY+AAG W + RKLM+ +
Sbjct: 631 RALLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEKDEVRKLMDTK 690
Query: 567 SLRKNPGYSFLQSSKK 582
+RK G S++Q K
Sbjct: 691 KVRKEAGCSWIQIKNK 706
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/468 (27%), Positives = 229/468 (48%), Gaps = 8/468 (1%)
Query: 52 IHAHIITNGYE-SNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
+HA + G++ ++ + T ++ Y VL RK F+ M +RNVV+WT++++GY Q G
Sbjct: 77 LHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAG 136
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
+ + +F M GV N FT+SS L A + G+ + K +FV +
Sbjct: 137 VLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCN 196
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
+L+++YAKCG +E+A ++F R+E +D+VSWN ++ GL + G + ++ LF
Sbjct: 197 SLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITML 256
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
T +++ L Q+H ++K G S + +L+D Y K G + A ++
Sbjct: 257 TESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVF 316
Query: 291 RSMLKT-DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
M + +++S TA+I G ++ + A LF M + +D+ +L V+
Sbjct: 317 LLMSGSQNVVSWTAMIDGCIQNGDIPLAA-ALFSRMREDGVAPNDLTYSTIL----TVSE 371
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
+ QIHA K VG AL+ Y+K +A F + K+V+SW++++
Sbjct: 372 ASFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTC 431
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
YA+ G + A + KM G+ PN+ T S + AC+ + F + K+R
Sbjct: 432 YAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHD 491
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
S +V ++AR+G +E+A + + + S W+++L + +G
Sbjct: 492 ALCVSSALVSMYARKGSIENAQCVFERQTDRDLLS-WNSMLSGYAQHG 538
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 97/192 (50%), Gaps = 7/192 (3%)
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSY-DAAVGNALIDMYAKSGEIADANRAFDEMGDK 398
++ IC +V LG+Q+HA + + D VG +L+DMY + D + F+ M +
Sbjct: 61 IIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKR 120
Query: 399 NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELF 458
NV++WTSL+ GY + G + + L+ +M+ EG+ PN TF S+L + G+ G +
Sbjct: 121 NVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVH 180
Query: 459 TDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
I K+ + +++++A+ G +E A + +M + S W+ ++ + G
Sbjct: 181 AQSI-KFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVS-WNTLMAGLVLNGR 238
Query: 519 TSLGELAARNLF 530
+L A LF
Sbjct: 239 ----DLEALQLF 246
>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 192/574 (33%), Positives = 310/574 (54%), Gaps = 12/574 (2%)
Query: 13 LKQALKFSLSCPDTLLDPST---YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLST 69
K+ L S+ PD+ P+ Y +L + E +IH ++ +GY ++ +++
Sbjct: 94 FKRLLNCSICVPDSFTFPNVIKAYGALGR-------EFLGRMIHTLVVKSGYVCDVVVAS 146
Query: 70 KVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA 129
++ YAK ++ + FD MPER+V SW +IS + Q+G E AL +F M SG
Sbjct: 147 SLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEP 206
Query: 130 NQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILF 189
N + + A+ AC+R+ WL+ G+ I K F + +V SAL+D+Y KC +E A +F
Sbjct: 207 NSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVF 266
Query: 190 ERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELM 249
+++ RK +V+WN+MI G +G + + M+ +G +P TL SIL A L+
Sbjct: 267 QKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLL 326
Query: 250 KISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFA 309
IH +I+ + + + SLID+Y K G A ++ K S +IS +
Sbjct: 327 HGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYI 386
Query: 310 RDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDA 369
N K A +++ M+ + D V +L C+ +A+L G+QIH + + D
Sbjct: 387 SVGNWFK-AVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDE 445
Query: 370 AVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE 429
+ +AL+DMY+K G +A R F+ + K+V+SWT +I+ Y HG EA+ + +M+
Sbjct: 446 LLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKF 505
Query: 430 GMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLES 489
G+ P+ VT L++L AC H GL EG + F+ M +KY I P EH+SC++D+ R G+L
Sbjct: 506 GLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLE 565
Query: 490 AYNMIRQM-NIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYT 548
AY +I+Q A L S + AC ++ SLG+ AR L + P+ + Y+VL N+Y
Sbjct: 566 AYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYA 625
Query: 549 AAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+ +WD AR+ R M+E LRK PG S+++ S K
Sbjct: 626 SGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDK 659
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 137/523 (26%), Positives = 254/523 (48%), Gaps = 10/523 (1%)
Query: 28 LDPSTYMSLLQFCIDK-KAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
++ S +SLL+ C + K+ R+ L+H I+T G ++ L +I Y D SAR
Sbjct: 1 MESSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARH 60
Query: 87 AFDRMPER-NVVSWTAMISGYAQNGYDENALLVFSAMLRSGV-RANQFTYSSALRACARM 144
F+ R +V W +++SGY++N + L VF +L + + FT+ + ++A +
Sbjct: 61 VFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGAL 120
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
GRMI + K +V ++ V S+L+ +YAK E++ +F+ + +DV SWN +I
Sbjct: 121 GREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVI 180
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G + + LF M G +P+ +L + A + L + +IH +K G E
Sbjct: 181 SCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFE 240
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGF-ARDDNHSKEAFDLFK 323
+ +L+D+Y K + A ++++ M + +++ ++I G+ A+ D SK ++
Sbjct: 241 LDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGD--SKSCVEILN 298
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
MI++ L +L C+ +L G+ IH + + + D V +LID+Y K G
Sbjct: 299 RMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCG 358
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
E A F + SW +I+ Y G +A+E+Y +M G+ P+ VTF S+L
Sbjct: 359 EANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLP 418
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
ACS +G ++ I++ R+ S ++D++++ G + A+ + + K
Sbjct: 419 ACSQLAALEKGKQIHLS-ISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVV 477
Query: 504 SLWSAILGACSIYGNT--SLGELAARNLFDMEPEKSVNYVVLS 544
S W+ ++ A +G +L + F ++P+ VLS
Sbjct: 478 S-WTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLS 519
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 180/569 (31%), Positives = 310/569 (54%), Gaps = 7/569 (1%)
Query: 16 ALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFY 75
AL F + +P T+ S+L + A +HA + G S++ + ++ Y
Sbjct: 187 ALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMY 246
Query: 76 AKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYS 135
AK G V A+ F+ M R++VSW +++G N + AL +F + + Q TY+
Sbjct: 247 AKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYA 306
Query: 136 SALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE-R 194
+ ++ CA ++ L R + + K F V +AL D Y+KCG + DA +F
Sbjct: 307 TVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGS 366
Query: 195 KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQI 254
++VVSW A+I G G + LF M + P+ FT ++L+AS+ + QI
Sbjct: 367 RNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILP----PQI 422
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH 314
H +IK + + +L+ Y+K+GS A +++ + + D+++ +A++S A+ +
Sbjct: 423 HAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDC 482
Query: 315 SKEAFDLFKDMILKKMGIDDVILCLMLNICA-NVASLNLGRQIHAFAFKYQSSYDAAVGN 373
+ LF M ++ + ++ + +++ CA A ++ GRQ HA + KY+ V +
Sbjct: 483 EGATY-LFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSS 541
Query: 374 ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP 433
AL+ MY++ G I A F+ D++++SW S+I+GYA+HGY +AIE +++M+ G+
Sbjct: 542 ALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQM 601
Query: 434 NDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNM 493
+ VTFL+++ C+H GL EG + F M+ ++I P EH++C+VDL++R G+L+ ++
Sbjct: 602 DGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSL 661
Query: 494 IRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAW 553
IR M A +W +LGAC ++ N LG+ +A L +EP S YV+LSNIY AAG W
Sbjct: 662 IRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKW 721
Query: 554 DNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+ RKLM+ R ++K G S++Q K
Sbjct: 722 KERDEVRKLMDYRKVKKEAGCSWIQIKNK 750
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/495 (26%), Positives = 241/495 (48%), Gaps = 10/495 (2%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYE-SNLHLSTKVIIFYAKVGDVLSA 84
L+D +T +L+ C +H + G++ + T ++ Y K G V
Sbjct: 95 VLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEG 154
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
+ F+ MP++NVV+WT++++G A + +F M G+ N FT++S L A A
Sbjct: 155 IEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQ 214
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
L G+ + K ++FV ++L+++YAKCG +EDA +F +E +D+VSWN ++
Sbjct: 215 GALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLM 274
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
GL + ++ LF K T ++++ +L Q+H ++K G
Sbjct: 275 AGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFH 334
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT-DIISCTALISGFARDDNHSKEAFDLFK 323
+ + +L D Y+K G + A ++ + +++S TA+ISG ++ + A LF
Sbjct: 335 LTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGD-IPLAVVLFS 393
Query: 324 DMILKKMGIDDVILCLMLNICANVASLN-LGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
M ++ ++ ML ASL+ L QIHA K + VG AL+ Y+K
Sbjct: 394 RMREDRVMPNEFTYSAMLK-----ASLSILPPQIHAQVIKTNYQHIPFVGTALLASYSKF 448
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
G DA F + K+V++W+++++ +A+ G A L+ KM +G+ PN+ T S++
Sbjct: 449 GSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVI 508
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
AC+ + F + KYR S +V +++R+G ++SA + + +
Sbjct: 509 DACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDL 568
Query: 503 ASLWSAILGACSIYG 517
S W++++ + +G
Sbjct: 569 VS-WNSMISGYAQHG 582
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 221/437 (50%), Gaps = 16/437 (3%)
Query: 80 DVLSARKAFDRMPERNV-VSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSAL 138
D AR D +P R+ V ++ YA+ G L FS R GV + T S L
Sbjct: 47 DPPGARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVL 106
Query: 139 RACARMR-WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDV 197
+AC + + G ++ ++ G + ++L+D+Y KCG + + +FE + +K+V
Sbjct: 107 KACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNV 166
Query: 198 VSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIH 255
V+W +++ G A + + LF M +G+ P+ FT S+L AS G ++L + ++H
Sbjct: 167 VTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQ--RVH 224
Query: 256 DLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHS 315
+K G SS + SL+++YAK G + A ++ M D++S L++G ++
Sbjct: 225 AQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECE- 283
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNAL 375
EA LF + + ++ +CAN+ L L RQ+H+ K+ V AL
Sbjct: 284 LEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTAL 343
Query: 376 IDMYAKSGEIADANRAFD-EMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
D Y+K GE+ADA F G +NV+SWT++I+G ++G A+ L+ +M+ + ++PN
Sbjct: 344 ADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPN 403
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDMI-NKYRILPRAEHFSCVVDLFARRGQLESAYNM 493
+ T+ ++L A L+ ++ +I Y+ +P + ++ +++ G E A ++
Sbjct: 404 EFTYSAMLKA----SLSILPPQIHAQVIKTNYQHIPFVG--TALLASYSKFGSTEDALSI 457
Query: 494 IRQMNIKPTASLWSAIL 510
+ + K + WSA+L
Sbjct: 458 FKMIEQKDVVA-WSAML 473
>gi|302822082|ref|XP_002992701.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
gi|300139547|gb|EFJ06286.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
Length = 941
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 184/557 (33%), Positives = 303/557 (54%), Gaps = 15/557 (2%)
Query: 3 IVRANFKTGQLKQALKFS--LSCPDTLLDPSTYMSLLQFCI---------DKKAERQAHL 51
IV A K G + A+ S + + D T++++L C + K+
Sbjct: 383 IVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQSALLKQYGNSKSLTDGRQ 442
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H+ +I+NG + + +L ++ Y + G + AR AF + +RNV SWT +IS QNG
Sbjct: 443 VHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQRNVFSWTILISLLVQNGE 502
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
L + +M G AN+ T+ S L AC+ L G+ I I+ ++ +A
Sbjct: 503 ASEGLELLKSMDLEGTEANKITFISLLGACSVTGDLSLGKTIHERIRTKGLESDIITSNA 562
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
LL++Y C +++A ++FER+ +DVVSW +I A G+ ++ L+R M ++ +PD
Sbjct: 563 LLNMYTTCESLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPD 622
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
TL S+L A L++ IH+ I+ G+E+ + +++ Y K ++ A Q++
Sbjct: 623 AVTLISVLEACASLRALVEGKAIHERIVASGVETDVFVGTAVVSFYGKCEAVEDARQVFD 682
Query: 292 SMLKTDIISCTALISGFARDDNHSKE-AFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
+L DI+ A+I +A+ NH +E AF L+ +M+ +M +DV L +L+ C++ +
Sbjct: 683 RILDKDIVCWNAMIGAYAQ--NHCEEKAFALYLEMVENQMPPNDVTLITLLDSCSSTCKM 740
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS-GEIADANRAFDEMGDKNVISWTSLIAG 409
G +H A +V NALI+MYAK G + A AF+ + KNV+SW+S++A
Sbjct: 741 ERGSSLHREAAARGYLSHTSVVNALINMYAKCCGNLEAAQTAFESVASKNVVSWSSIVAA 800
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
YA++G A L+ M +G++PN VTF S+L ACSH GL EGW F M + + P
Sbjct: 801 YARNGEEDRARNLFWTMNQDGVLPNIVTFTSVLHACSHAGLADEGWSYFLSMQGDHHLEP 860
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
EH+ C+V+L A+ G+++ A + + M ++P AS W ++LGAC ++ + G LAA+ L
Sbjct: 861 TPEHYGCMVNLLAKSGRVKQAASFMSAMPVQPDASAWRSLLGACEVHTDKEYGALAAKQL 920
Query: 530 FDMEPEKSVNYVVLSNI 546
D EP S YV+L NI
Sbjct: 921 LDAEPRNSAAYVLLYNI 937
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 156/574 (27%), Positives = 287/574 (50%), Gaps = 50/574 (8%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T ++ + C Q IHA I+++G +++ LS ++ Y K G V AR AF
Sbjct: 9 DEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGSVEEARNAF 68
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
DRMPER+++SW AMI+ YAQ+ + A+ +++ G + ++ T++S L AC L+
Sbjct: 69 DRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACFASGDLK 128
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
GRM+ FV + V + L+ +Y+ CG ++DA +FE R DV +W +I
Sbjct: 129 FGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTWTTVIAAYT 188
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSN 267
G + +F + M ++G++ + T ++L + +E+++ + +H L + GL+ S
Sbjct: 189 RHGKLECAFATWSKMHQEGLRSNEITFLTVLD-TCSSLEVLETGKHVHRLALGSGLDFSL 247
Query: 268 KLTGSLIDVYAKYG-SIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
++ SLI +Y K A +++ + + +IS +A I+ + + EA F+ M
Sbjct: 248 RMENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAYGQH----WEAIKTFELMN 303
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
L+ + + L +L CA V + GR+IHA + + V NA +YAK +A
Sbjct: 304 LEGVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVA 363
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
DA+R F + K+ +SW ++++ YAK G +AI L ++M+ EG VP+D+TF+++L++CS
Sbjct: 364 DASRVFSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCS 423
Query: 447 HTGL---------TCEGWELFTDMINK----------------------------YRILP 469
+ L +G ++ + MI+ ++ +
Sbjct: 424 QSALLKQYGNSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIH 483
Query: 470 RAEHFS--CVVDLFARRGQLESAYNMIRQMNIKPTAS---LWSAILGACSIYGNTSLGEL 524
+ FS ++ L + G+ +++ M+++ T + + ++LGACS+ G+ SLG+
Sbjct: 484 QRNVFSWTILISLLVQNGEASEGLELLKSMDLEGTEANKITFISLLGACSVTGDLSLGKT 543
Query: 525 AARNLFDMEPEKS-VNYVVLSNIYTAAGAWDNAR 557
+ E + L N+YT + D AR
Sbjct: 544 IHERIRTKGLESDIITSNALLNMYTTCESLDEAR 577
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 144/514 (28%), Positives = 245/514 (47%), Gaps = 21/514 (4%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
+ +T S+L+ C A Q IHA ++ Y N + YAK V A + F
Sbjct: 310 NATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVADASRVF 369
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR----- 143
+P ++ VSW A++S YA+ G +A+ + M G + T+ + L +C++
Sbjct: 370 SSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQSALLK 429
Query: 144 ----MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS 199
+ L GR + + + ++ + L+ +Y +CG ++DA F+ I +++V S
Sbjct: 430 QYGNSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQRNVFS 489
Query: 200 WNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS--VGGIELMKISQIHDL 257
W +I L G + L +SM +G + + T S+L A G + L K IH+
Sbjct: 490 WTILISLLVQNGEASEGLELLKSMDLEGTEANKITFISLLGACSVTGDLSLGKT--IHER 547
Query: 258 IIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKE 317
I GLES + +L+++Y S+ A ++ M+ D++S T +IS +A + E
Sbjct: 548 IRTKGLESDIITSNALLNMYTTCESLDEARLVFERMVFRDVVSWTIIISAYAH-AGYPLE 606
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
A L++ M + D V L +L CA++ +L G+ IH D VG A++
Sbjct: 607 ALQLYRRMEQEFSRPDAVTLISVLEACASLRALVEGKAIHERIVASGVETDVFVGTAVVS 666
Query: 378 MYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVT 437
Y K + DA + FD + DK+++ W ++I YA++ +A LY +M M PNDVT
Sbjct: 667 FYGKCEAVEDARQVFDRILDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMPPNDVT 726
Query: 438 FLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFAR-RGQLESAYNMIRQ 496
++LL +CS T G L + + L + +++++A+ G LE+A
Sbjct: 727 LITLLDSCSSTCKMERGSSLHREAAAR-GYLSHTSVVNALINMYAKCCGNLEAAQTAFES 785
Query: 497 MNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
+ K S WS+I+ A + G E ARNLF
Sbjct: 786 VASKNVVS-WSSIVAAYARNGE----EDRARNLF 814
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 181/390 (46%), Gaps = 11/390 (2%)
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
GV ++ T +A+ ACA + G+ I I ++ + ++L+ +Y KCG +E+A
Sbjct: 5 GVPGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGSVEEA 64
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGG 245
F+R+ +D++SWNAMI A + L+ +G KPD T S+L A
Sbjct: 65 RNAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACFAS 124
Query: 246 IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALI 305
+L +H+ + S + LI +Y+ GS+ A ++ + D+ + T +I
Sbjct: 125 GDLKFGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTWTTVI 184
Query: 306 SGFARDDNHSKE--AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY 363
+ + R H K AF + M + + +++ +L+ C+++ L G+ +H A
Sbjct: 185 AAYTR---HGKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRLALGS 241
Query: 364 QSSYDAAVGNALIDMYAKSGEIAD-ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIEL 422
+ + N+LI MY K D A F + +VISW++ IA Y +H EAI+
Sbjct: 242 GLDFSLRMENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAYGQH---WEAIKT 298
Query: 423 YKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFA 482
++ M EG+ PN T S+L AC+ G +G + ++ + L+A
Sbjct: 299 FELMNLEGVKPNATTLTSVLRACATVGAHEQGRRIHA-LVLAGPYTQNTTVLNAAASLYA 357
Query: 483 RRGQLESAYNMIRQMNIKPTASLWSAILGA 512
+ ++ A + + K S W+AI+ A
Sbjct: 358 KCSRVADASRVFSSIPCKDAVS-WNAIVSA 386
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 160/346 (46%), Gaps = 20/346 (5%)
Query: 226 QGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRS 285
+G+ D TL + + A + ++ QIH I+ GL +S L+ SL+ +Y K GS+
Sbjct: 4 EGVPGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGSVEE 63
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
A + M + D+IS A+I+ +A+ + K+A L+ L+ D+V +LN C
Sbjct: 64 ARNAFDRMPERDLISWNAMITVYAQHEC-GKQAIQLYAYSRLEGTKPDEVTFASLLNACF 122
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
L GR +H D V N LI MY+ G + DA F+ +V +WT+
Sbjct: 123 ASGDLKFGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTWTT 182
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
+IA Y +HG A + KM EG+ N++TFL++L TC E+ + +
Sbjct: 183 VIAAYTRHGKLECAFATWSKMHQEGLRSNEITFLTVLD-------TCSSLEVLETGKHVH 235
Query: 466 RI-LPRAEHFSCVVD--LFARRGQLESAYNMIRQMNI---KPTASLWSAILGACSIYGN- 518
R+ L FS ++ L + G+ + R++ + +P+ WSA + A YG
Sbjct: 236 RLALGSGLDFSLRMENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAA---YGQH 292
Query: 519 -TSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
++ NL ++P + VL T GA + R+ L+
Sbjct: 293 WEAIKTFELMNLEGVKPNATTLTSVLRACAT-VGAHEQGRRIHALV 337
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 171/527 (32%), Positives = 291/527 (55%), Gaps = 1/527 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H + G +++ + + ++ Y K+G++ + K FD MP RN V+WTA+I+G + GY
Sbjct: 138 LHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGY 197
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
E L FS M RS V + + Y+ AL+A A L GR I K F EN FV ++
Sbjct: 198 SEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANS 257
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L +Y KCG ++ F ++ DVVSW ++ G D F+ M + P+
Sbjct: 258 LTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPN 317
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
+T +++ L Q+H ++ +G ++ + S++ +Y+K G + S +++
Sbjct: 318 EYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFC 377
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
SM DII+ + +I+ +++ + +EAF+ M + ++ L +L++C ++A L
Sbjct: 378 SMKFRDIITWSTIIAAYSQV-GYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILE 436
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
G+Q+HA + V +ALI MYAK G IA+A++ F + ++ISWT++I+GYA
Sbjct: 437 QGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYA 496
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
+HG+ EAIEL++ ++ G+ P+ VTF+ +L ACSH G+ G+ F M Y I P
Sbjct: 497 EHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSK 556
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
EH+ C++DL R G+L A +IR M I+ +WS +L AC I+G+ G+ AA +
Sbjct: 557 EHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLK 616
Query: 532 MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
++P + ++ L+NI+ A G W A R LM+ + + K PG+S ++
Sbjct: 617 LDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVK 663
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 139/504 (27%), Positives = 240/504 (47%), Gaps = 49/504 (9%)
Query: 64 NLHLSTKVIIFYA--------KVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENA 115
N H S KV + A K + AR FD++P+R+ VSWT +ISGY + A
Sbjct: 40 NAHFSNKVDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEA 99
Query: 116 LLVFSAM-LRSGVRANQFTYSSALRACA-RMRWLQGGRMIQGSIQKGRFVENLFVKSALL 173
L +FS M L+S +R + F S L+ C + +L G + S++ G V ++FV SALL
Sbjct: 100 LRLFSKMRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTG-LVNSVFVGSALL 158
Query: 174 DLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCF 233
D+Y K G I + +F+ + ++ V+W A+I GL G+++ F M R ++ D +
Sbjct: 159 DMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSY 218
Query: 234 TLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
L+AS L IH +K G + ++ + SL +Y K G + +R M
Sbjct: 219 AYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKM 278
Query: 294 LKTDIISCTALISGFARDDNHSKE--AFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
D++S T +++ + + KE FK M + ++ +++ CAN A L
Sbjct: 279 RTLDVVSWTTIVTAYIQ---MGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLK 335
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
G Q+HA +V N+++ +Y+K GE+A ++ F M +++I+W+++IA Y+
Sbjct: 336 WGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYS 395
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELF----------TDM 461
+ GYG EA E +M+ EG PN+ S+L C + +G +L T M
Sbjct: 396 QVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSM 455
Query: 462 INKYRILPRAE--------------------HFSCVVDLFARRGQLESA---YNMIRQMN 498
+ I+ A+ ++ ++ +A G + A + I+++
Sbjct: 456 VCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVG 515
Query: 499 IKPTASLWSAILGACSIYGNTSLG 522
++P + + +L ACS G LG
Sbjct: 516 LRPDSVTFIGVLTACSHAGMVDLG 539
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 198/390 (50%), Gaps = 7/390 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D Y L+ D A IH + G++ N ++ + Y K G + F
Sbjct: 216 DSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTF 275
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+M +VVSWT +++ Y Q G ++ L F M S V N++T+S+ + CA L+
Sbjct: 276 RKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLK 335
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G + + FV L V ++++ LY+KCG + +F ++ +D+++W+ +I +
Sbjct: 336 WGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYS 395
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G+ +++F M +G KP+ F L S+L L + Q+H ++ +GLE ++
Sbjct: 396 QVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSM 455
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +LI +YAK GSI A +++ K DIIS TA+ISG+A + HS+EA +LF++ ++
Sbjct: 456 VCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYA-EHGHSQEAIELFEN--IQ 512
Query: 329 KMGI--DDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
K+G+ D V +L C++ ++LG ++ + Y + +ID+ ++G +
Sbjct: 513 KVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRL 572
Query: 386 ADANRAFDEMGDK-NVISWTSLIAGYAKHG 414
DA M + + + W++L+ HG
Sbjct: 573 HDAETLIRSMPIQWDDVVWSTLLRACRIHG 602
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 126/294 (42%), Gaps = 40/294 (13%)
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
E++N+L + K ++ A L+ + + D +S T +ISG+ + S EA LF
Sbjct: 51 EANNQL-----KILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSD-SSEALRLFS 104
Query: 324 DMILK-KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
M L+ ++ ID +L L L C + G +H F+ K VG+AL+DMY K
Sbjct: 105 KMRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKI 164
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
GEI + + FDEM +N ++WT++I G + GY + + M + + + L
Sbjct: 165 GEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIAL 224
Query: 443 FACSHTGLTCEGWEL------------------FTDMINKYRILPRAEH----------- 473
A + +G G + T M NK L H
Sbjct: 225 KASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVV 284
Query: 474 -FSCVVDLFARRGQLE---SAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGE 523
++ +V + + G+ + A+ +R N+ P +SA++ C+ + GE
Sbjct: 285 SWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGE 338
>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 188/547 (34%), Positives = 299/547 (54%), Gaps = 3/547 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
+ +S+L C + IH +++ G +S + + ++ Y K G V +R+ FD +
Sbjct: 111 SIVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEI 170
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
ERN VSW A+I+ A +++AL +F M+ GV+ N T+SS L ++ G+
Sbjct: 171 SERNGVSWNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGK 230
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I G + ++FV +AL+D+YAK G A +F +I K++VSWNAM+ A
Sbjct: 231 EIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNR 290
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
+ L R M G P+ T ++L A L +IH I+ G ++
Sbjct: 291 LELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSN 350
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
+L D+YAK G + A ++++ L+ D +S LI G+++ N S E+ LF +M +K M
Sbjct: 351 ALTDMYAKCGCLNLARRVFKISLR-DEVSYNILIIGYSQTTNCS-ESLRLFLEMGIKGMK 408
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
+D V +++ CAN+A+L G+++H A + + NAL+D Y K G I A +
Sbjct: 409 LDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKV 468
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLT 451
F ++ ++ SW S+I GY G AI L++ MK +G+ + V+++++L ACSH GL
Sbjct: 469 FRQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLV 528
Query: 452 CEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
EG + F M I P H++C+VDL R G +E A +I + I+P A++W A+LG
Sbjct: 529 EEGKKYFEHM-QVQNIKPTQMHYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLG 587
Query: 512 ACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKN 571
AC I+G L AA +LF ++P+ S Y VLSN+Y AG WD A + RKLM+ R +KN
Sbjct: 588 ACRIHGYIELAHWAAEHLFKLKPQHSGYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKN 647
Query: 572 PGYSFLQ 578
PG S++Q
Sbjct: 648 PGCSWVQ 654
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 167/550 (30%), Positives = 294/550 (53%), Gaps = 18/550 (3%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD T+ +L+ C D + ++ IH + G++S++ + +++FY G + ++
Sbjct: 5 LDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRV 64
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAM-LRSGVRANQFTYSSALRACARMRW 146
FD M ER+VVSW ++I ++ +G+ A+ +F M LRSG R N + S L CA +
Sbjct: 65 FDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLED 124
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
GR I + K + V +AL+D+Y KCG+++D+ +F+ I ++ VSWNA+I
Sbjct: 125 GVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITS 184
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLGLES 265
LA N D+ +FR M+ G+KP+ T S+L V ++L +IH ++ GLES
Sbjct: 185 LAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLV-ELKLFDFGKEIHGFSLRFGLES 243
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ +LID+YAK G A ++ + + +I+S A+++ FA+ + A DL + M
Sbjct: 244 DIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQ-NRLELAAVDLVRQM 302
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ V +L CA + L G++IHA A + SS D V NAL DMYAK G +
Sbjct: 303 QADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCL 362
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A R F ++ ++ +S+ LI GY++ E++ L+ +M +GM + V+++ ++ AC
Sbjct: 363 NLARRVF-KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISAC 421
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
++ +G E+ + K+ + + ++D + + G+++ A + RQ+ + TAS
Sbjct: 422 ANLAALKQGKEVHGLAVRKH-LHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASW 480
Query: 506 WSAILGACSIYGNTSLGELA-ARNLFDMEPE-----KSVNYVVLSNIYTAAGAWDNARKT 559
S ILG YG LGEL A NLF+ E SV+Y+ + + + G + +K
Sbjct: 481 NSMILG----YG--MLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKY 534
Query: 560 RKLMEERSLR 569
+ M+ ++++
Sbjct: 535 FEHMQVQNIK 544
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 211/373 (56%), Gaps = 7/373 (1%)
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
GVR + T+ L+ACA +Q GR I G + K F ++FV + LL Y CG ++D
Sbjct: 2 GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM-MRQGMKPDCFTLGSILRASVG 244
+F+ + +DVVSWN++IG ++ GF ++ LF M +R G +P+ ++ S+L G
Sbjct: 62 KRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAG 121
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
+ + QIH ++K GL+S + +L+DVY K G ++ + +++ + + + +S A+
Sbjct: 122 LEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAI 181
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
I+ A + +++A ++F+ MI + + V ML + + + G++IH F+ ++
Sbjct: 182 ITSLAYLE-RNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFG 240
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
D V NALIDMYAKSG A+ F+++G+KN++SW +++A +A++ A++L +
Sbjct: 241 LESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVR 300
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF--SCVVDLFA 482
+M+ +G +PN VTF ++L AC+ G G E+ I R + F + + D++A
Sbjct: 301 QMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAI---RTGSSVDLFVSNALTDMYA 357
Query: 483 RRGQLESAYNMIR 495
+ G L A + +
Sbjct: 358 KCGCLNLARRVFK 370
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 176/348 (50%), Gaps = 15/348 (4%)
Query: 227 GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSA 286
G++ D T +L+A + + K +IH ++ KLG +S + +L+ Y G ++
Sbjct: 2 GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61
Query: 287 YQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVI-LCLMLNICA 345
+++ ML+ D++S ++I F+ ++ EA LF +M L+ +++ + +L +CA
Sbjct: 62 KRVFDEMLERDVVSWNSVIGVFSVHGFYA-EAIHLFCEMNLRSGFRPNMVSIVSVLPVCA 120
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
+ GRQIH + K VGNAL+D+Y K G + D+ R FDE+ ++N +SW +
Sbjct: 121 GLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNA 180
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
+I A +A+E+++ M G+ PN VTF S+L L G E+ +
Sbjct: 181 IITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSL--- 237
Query: 466 RILPRAEHF--SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGE 523
R ++ F + ++D++A+ G+ A N+ Q+ K S W+A++ + L E
Sbjct: 238 RFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVS-WNAMVAN---FAQNRL-E 292
Query: 524 LAARNLF-DMEPEKSV-NYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
LAA +L M+ + + N V +N+ A R +++ R++R
Sbjct: 293 LAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEI-HARAIR 339
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 185/581 (31%), Positives = 310/581 (53%), Gaps = 40/581 (6%)
Query: 34 MSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVI---IFYAKVGDVLSARKAFDR 90
+SLL C K + +IHA +I G + + +K+I + + A F+
Sbjct: 6 LSLLHNC---KTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFET 62
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+ E N++ W M G+A + +AL ++ M+ G+ N +T+ L++CA+ + + G
Sbjct: 63 IQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREG 122
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA------------------------- 185
+ I G + K + +L+V ++L+ +Y + G +EDA
Sbjct: 123 QQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASK 182
Query: 186 -WI-----LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
+I +F+ I KDVVSWNAMI G A G N ++ LF+ MM+ ++PD T+ S++
Sbjct: 183 GYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVV 242
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
A + Q+H I G S+ K+ +LID+Y K G + +A L+ + D+I
Sbjct: 243 SACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVI 302
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
S LI G+ N KEA LF++M+ +DV + +L CA++ ++ +GR IH +
Sbjct: 303 SWNTLIGGYTHM-NLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVY 361
Query: 360 AFKYQSSYDAAVGN--ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
K A + +LIDMYAK G+I A + FD + ++++ SW ++I G+A HG +
Sbjct: 362 INKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRAN 421
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
A +++ +M+ + P+D+TF+ LL ACSH+G+ G +F M Y+I P+ EH+ C+
Sbjct: 422 AAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCM 481
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKS 537
+DL G + A MI M ++P +W ++L AC +Y N LGE A+NL +EP+
Sbjct: 482 IDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNP 541
Query: 538 VNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+YV+LSNIY AG W+ K R L+ ++ ++K PG S ++
Sbjct: 542 GSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIE 582
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/413 (32%), Positives = 213/413 (51%), Gaps = 40/413 (9%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ LL+ C KA R+ IH H++ GY+ +L++ T +I Y + G + ARK FD+
Sbjct: 105 TFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQS 164
Query: 92 PERNVVSWTAMISGYAQNGY-------------------------------DENALLVFS 120
R+VVS+TA+I+GYA GY ++ AL +F
Sbjct: 165 SHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFK 224
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M+++ VR ++ T S + ACA+ ++ GR + I F NL + +AL+DLY KCG
Sbjct: 225 EMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCG 284
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+E A LFE + KDV+SWN +IGG ++ LF+ M+R G P+ T+ SIL
Sbjct: 285 EVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILP 344
Query: 241 --ASVGGIELMKISQIHDLIIKL--GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT 296
A +G IE+ + IH I K G+ +++ SLID+YAK G I +A Q++ S+L
Sbjct: 345 ACAHLGAIEIGR--WIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNR 402
Query: 297 DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI 356
+ S A+I GFA + AFD+F M ++ DD+ +L+ C++ L+LGR I
Sbjct: 403 SLSSWNAMIFGFAM-HGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHI 461
Query: 357 -HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLI 407
+ Y+ + +ID+ SG +A + M + + + W SL+
Sbjct: 462 FRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLL 514
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 185/408 (45%), Gaps = 48/408 (11%)
Query: 9 KTGQLKQALKFSLSCPDTLLDP--STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+TG K+AL+ T + P ST +S++ C + +H+ I +G+ SNL
Sbjct: 212 ETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLK 271
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ +I Y K G+V +A F+ + ++V+SW +I GY + ALL+F MLRSG
Sbjct: 272 IVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG 331
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKG-RFVENLFV-KSALLDLYAKCGWIED 184
N T S L ACA + ++ GR I I K + V N +++L+D+YAKCG IE
Sbjct: 332 ESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEA 391
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG 244
A +F+ I + + SWNAMI G AM G + +F +F M + ++PD T +L A
Sbjct: 392 AQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACS- 450
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
H ++ LG RS + Y+ K + C
Sbjct: 451 ----------HSGMLDLGRH-----------------IFRSMKEDYKITPKLEHYGCMID 483
Query: 305 ISGFARDDNHS---KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF 361
+ G HS KEA ++ M +M D VI C +L C A++ LG
Sbjct: 484 LLG------HSGLFKEAEEMINTM---EMEPDGVIWCSLLKACKMYANVELGESYAQNLI 534
Query: 362 KYQSSYDAAVGNALIDMYAKSG---EIADANRAFDEMGDKNVISWTSL 406
K + + L ++YA +G E+A ++ G K V +S+
Sbjct: 535 KIEPKNPGSY-VLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSI 581
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 158/447 (35%), Positives = 272/447 (60%), Gaps = 3/447 (0%)
Query: 134 YSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE 193
Y S L C R ++ G+ + + K ++ ++++++ L+ LY KC + DA +F+ +
Sbjct: 65 YDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMP 124
Query: 194 RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ 253
+++VVSW AMI + +GF ++ LF M+R +P+ FT +IL + G + Q
Sbjct: 125 QRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQ 184
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN 313
IH + IK ES + SL+D+YAK G I A+ ++ + + D+++CTA+ISG+A+
Sbjct: 185 IHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQM-G 243
Query: 314 HSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN 373
+EA LF+ + ++ M + V +L + +A+LN G+Q+H+ + + N
Sbjct: 244 LDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLN 303
Query: 374 ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV- 432
+LIDMY+K G + A R FD M ++ ISW +++ GY+KHG E +EL+K M+ E V
Sbjct: 304 SLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVK 363
Query: 433 PNDVTFLSLLFACSHTGLTCEGWELFTDMIN-KYRILPRAEHFSCVVDLFARRGQLESAY 491
P+ +T+L++L CSH L G E+F +M+N K I P H+ CVVDL R G++E A+
Sbjct: 364 PDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAF 423
Query: 492 NMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAG 551
+ I++M PTA++W ++LG+C ++ + +G + + L ++EPE + NYV+LSN+Y +AG
Sbjct: 424 DFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAG 483
Query: 552 AWDNARKTRKLMEERSLRKNPGYSFLQ 578
W++ R R LM+E+++ K PG S+++
Sbjct: 484 KWEDMRNIRDLMQEKAVTKEPGRSWVE 510
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 127/390 (32%), Positives = 213/390 (54%), Gaps = 9/390 (2%)
Query: 6 ANFKT----GQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGY 61
N KT GQLK+AL ++ + Y S+L C+ ++A R+ +H H+I Y
Sbjct: 35 PNLKTLCSSGQLKEAL-LQMAILGREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCY 93
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSA 121
+++L T++I+ Y K + AR FD MP+RNVVSWTAMIS Y+Q G+ AL +F
Sbjct: 94 LPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVE 153
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
MLRS N FT+++ L +C + GR I K + ++FV S+LLD+YAK G
Sbjct: 154 MLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGR 213
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
I DA +F + +DVV+ A+I G A G ++++ LFR + +GM + T S+L A
Sbjct: 214 ICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTA 273
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC 301
G L Q+H +++ G S L SLID+Y+K G++ A +++ SM + IS
Sbjct: 274 LSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISW 333
Query: 302 TALISGFARDDNHSKEAFDLFKDMILK-KMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
A++ G+++ ++E +LFK M + K+ D + +L+ C++ ++G +I
Sbjct: 334 NAMLVGYSK-HGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNM 392
Query: 361 FKYQSSYDAAVGN--ALIDMYAKSGEIADA 388
+ + +G+ ++D+ ++G + +A
Sbjct: 393 VNGKDGIEPDIGHYGCVVDLLGRAGRVEEA 422
>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
Length = 863
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 191/573 (33%), Positives = 307/573 (53%), Gaps = 6/573 (1%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K+G L +AL + D T+ +L+ C R +HAH++ G+ +
Sbjct: 166 KSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVD 225
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ ++ YAK GDV++ARK FD M + +SW AMI+G+ +NG L +F ML
Sbjct: 226 VLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDE 285
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
V+ N T +S A + + + + G K F ++ ++L+ +YA G + A
Sbjct: 286 VQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQAR 345
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+F R++ +D ++W AMI G GF D + ++ M + PD T+ S L A
Sbjct: 346 TVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLG 405
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
L ++H+L G S +T +++++YAK I A ++++ M + D++S +++I+
Sbjct: 406 SLDVGVKLHELAESKGFISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIA 465
Query: 307 GFARDDNHSK-EAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS 365
GF NH EA F+ M L + + V L CA +L G++IHA +
Sbjct: 466 GFCF--NHRNFEALYYFRHM-LADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGI 522
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKK 425
Y+ + NALID+Y K G+ A F G K+V+SW +IAG+ HG+G A+ + +
Sbjct: 523 EYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQ 582
Query: 426 MKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRG 485
M G P++VTF++LL ACS G+ EGWELF M KY I+P +H++C+VDL +R G
Sbjct: 583 MVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAG 642
Query: 486 QLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSN 545
QL AYN I +M I P A++W A+L C I+ + LGELAA+ + +EP + +V+L +
Sbjct: 643 QLTEAYNFINEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCD 702
Query: 546 IYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+Y A WD + RK M E+ L + G S+++
Sbjct: 703 LYADACLWDKLARVRKTMREKGLDHDSGCSWVE 735
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 153/519 (29%), Positives = 258/519 (49%), Gaps = 13/519 (2%)
Query: 4 VRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYES 63
+RA GQL QAL + L D Y++L + C ++A AH
Sbjct: 63 LRALCSHGQLAQAL-WLLESSAEPPDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWF 121
Query: 64 NLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML 123
L L ++ + G+ A + F +MPER+V SW M+ GY ++G + AL ++ M+
Sbjct: 122 GLRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMM 181
Query: 124 RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIE 183
+GVR + +T+ LR+C + + GR + + + F E + V +AL+ +YAKCG +
Sbjct: 182 WAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVM 241
Query: 184 DAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV 243
A +F+ + D +SWNAMI G G + LF +M+ ++P+ T+ S+ AS
Sbjct: 242 AARKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASG 301
Query: 244 GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTA 303
++ ++H L +K G SLI +YA G +R A ++ M D ++ TA
Sbjct: 302 LLSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTA 361
Query: 304 LISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY 363
+ISG+ ++ K A +++ M + + DD+ + L CA + SL++G ++H A
Sbjct: 362 MISGYEKNGFPDK-ALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESK 420
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELY 423
V NA+++MYAKS I A F M +K+V+SW+S+IAG+ + EA+ +
Sbjct: 421 GFISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYF 480
Query: 424 KKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM----INKYRILPRAEHFSCVVD 479
+ M + + PN VTF++ L AC+ TG G E+ + I LP A ++D
Sbjct: 481 RHMLAD-VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNA-----LID 534
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
L+ + GQ A+ K S W+ ++ +G+
Sbjct: 535 LYVKCGQTGYAWAQFCAHGAKDVVS-WNIMIAGFVAHGH 572
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 169/445 (37%), Positives = 267/445 (60%), Gaps = 3/445 (0%)
Query: 134 YSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE 193
YS L C +R L+ GR I IQ F ++L + + +L++YAKCG +E+A LF+++
Sbjct: 108 YSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMP 167
Query: 194 RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ 253
KD+VSW +I G + G ++ LF M+ G +P+ FTL S+L+AS G Q
Sbjct: 168 TKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQ 227
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN 313
+H +K G + + + SL+D+YA++ +R A ++ S+ +++S ALI+G AR
Sbjct: 228 LHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHAR-KG 286
Query: 314 HSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN 373
+ LF M+ + +L CA+ SL G+ +HA K A +GN
Sbjct: 287 EGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGN 345
Query: 374 ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP 433
LIDMYAKSG I DA + F + ++++SW S+I+GYA+HG G EA++L+++M + P
Sbjct: 346 TLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQP 405
Query: 434 NDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNM 493
N++TFLS+L ACSH+GL EG + + +++ K++I + H VVDL R G+L A
Sbjct: 406 NEITFLSVLTACSHSGLLDEG-QYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKF 464
Query: 494 IRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAW 553
I +M IKPTA++W A+LGAC ++ N LG AA +F+++P S +V+LSNIY +AG
Sbjct: 465 IEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRL 524
Query: 554 DNARKTRKLMEERSLRKNPGYSFLQ 578
+A K RK+M+E ++K P S+++
Sbjct: 525 SDAAKVRKMMKESGVKKEPACSWVE 549
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 130/395 (32%), Positives = 217/395 (54%), Gaps = 5/395 (1%)
Query: 21 LSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGD 80
++C + + Y +L C + +Q IHAHI ++ +E +L L ++ YAK G
Sbjct: 96 INCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGS 155
Query: 81 VLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRA 140
+ A+ FD+MP +++VSWT +ISGY+Q+G AL +F ML G + N+FT SS L+A
Sbjct: 156 LEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKA 215
Query: 141 CARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSW 200
GR + K + N+ V S+LLD+YA+ + +A ++F + K+VVSW
Sbjct: 216 SGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSW 275
Query: 201 NAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR-ASVGGIELMKISQIHDLII 259
NA+I G A +G + LF M+RQG +P FT S+L AS G +E K +H +I
Sbjct: 276 NALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLACASSGSLEQGK--WVHAHVI 333
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
K G + + +LID+YAK GSI+ A +++R ++K DI+S ++ISG+A+ EA
Sbjct: 334 KSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQ-HGLGAEAL 392
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMY 379
LF+ M+ K+ +++ +L C++ L+ G+ K++ A ++D+
Sbjct: 393 QLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLL 452
Query: 380 AKSGEIADANRAFDEMGDKNVIS-WTSLIAGYAKH 413
++G + +AN+ +EM K + W +L+ H
Sbjct: 453 GRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMH 487
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 171/527 (32%), Positives = 291/527 (55%), Gaps = 1/527 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H + G +++ + + ++ Y K+G++ + K FD MP RN V+WTA+I+G + GY
Sbjct: 138 LHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGY 197
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
E L FS M RS V + + Y+ AL+A A L GR I K F EN FV ++
Sbjct: 198 SEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANS 257
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L +Y KCG ++ F ++ DVVSW ++ G D F+ M + P+
Sbjct: 258 LTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPN 317
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
+T +++ L Q+H ++ +G ++ + S++ +Y+K G + S +++
Sbjct: 318 EYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFC 377
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
SM DII+ + +I+ +++ + +EAF+ M + ++ L +L++C ++A L
Sbjct: 378 SMKFRDIITWSTIIAAYSQV-GYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILE 436
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
G+Q+HA + V +ALI MYAK G IA+A++ F + ++ISWT++I+GYA
Sbjct: 437 QGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYA 496
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
+HG+ EAIEL++ ++ G+ P+ VTF+ +L ACSH G+ G+ F M Y I P
Sbjct: 497 EHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSK 556
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
EH+ C++DL R G+L A +IR M I+ +WS +L AC I+G+ G+ AA +
Sbjct: 557 EHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLK 616
Query: 532 MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
++P + ++ L+NI+ A G W A R LM+ + + K PG+S ++
Sbjct: 617 LDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVK 663
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 139/504 (27%), Positives = 240/504 (47%), Gaps = 49/504 (9%)
Query: 64 NLHLSTKVIIFYA--------KVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENA 115
N H S KV + A K + AR FD++P+R+ VSWT +ISGY + A
Sbjct: 40 NAHFSNKVDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEA 99
Query: 116 LLVFSAM-LRSGVRANQFTYSSALRACA-RMRWLQGGRMIQGSIQKGRFVENLFVKSALL 173
L +FS M L+S +R + F S L+ C + +L G + S++ G V ++FV SALL
Sbjct: 100 LRLFSKMRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXG-LVNSVFVGSALL 158
Query: 174 DLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCF 233
D+Y K G I + +F+ + ++ V+W A+I GL G+++ F M R ++ D +
Sbjct: 159 DMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSY 218
Query: 234 TLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
L+AS L IH +K G + ++ + SL +Y K G + +R M
Sbjct: 219 AYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKM 278
Query: 294 LKTDIISCTALISGFARDDNHSKE--AFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
D++S T +++ + + KE FK M + ++ +++ CAN A L
Sbjct: 279 RTLDVVSWTTIVTAYIQ---MGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLK 335
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
G Q+HA +V N+++ +Y+K GE+A ++ F M +++I+W+++IA Y+
Sbjct: 336 WGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYS 395
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELF----------TDM 461
+ GYG EA E +M+ EG PN+ S+L C + +G +L T M
Sbjct: 396 QVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSM 455
Query: 462 INKYRILPRAE--------------------HFSCVVDLFARRGQLESA---YNMIRQMN 498
+ I+ A+ ++ ++ +A G + A + I+++
Sbjct: 456 VCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVG 515
Query: 499 IKPTASLWSAILGACSIYGNTSLG 522
++P + + +L ACS G LG
Sbjct: 516 LRPDSVTFIGVLTACSHAGMVDLG 539
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 198/390 (50%), Gaps = 7/390 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D Y L+ D A IH + G++ N ++ + Y K G + F
Sbjct: 216 DSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTF 275
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+M +VVSWT +++ Y Q G ++ L F M S V N++T+S+ + CA L+
Sbjct: 276 RKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLK 335
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G + + FV L V ++++ LY+KCG + +F ++ +D+++W+ +I +
Sbjct: 336 WGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYS 395
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G+ +++F M +G KP+ F L S+L L + Q+H ++ +GLE ++
Sbjct: 396 QVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSM 455
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +LI +YAK GSI A +++ K DIIS TA+ISG+A + HS+EA +LF++ ++
Sbjct: 456 VCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYA-EHGHSQEAIELFEN--IQ 512
Query: 329 KMGI--DDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
K+G+ D V +L C++ ++LG ++ + Y + +ID+ ++G +
Sbjct: 513 KVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRL 572
Query: 386 ADANRAFDEMGDK-NVISWTSLIAGYAKHG 414
DA M + + + W++L+ HG
Sbjct: 573 HDAETLIRSMPIQWDDVVWSTLLRACRIHG 602
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 126/294 (42%), Gaps = 40/294 (13%)
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
E++N+L + K ++ A L+ + + D +S T +ISG+ + S EA LF
Sbjct: 51 EANNQL-----KILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSD-SSEALRLFS 104
Query: 324 DMILK-KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
M L+ ++ ID +L L L C + G +H F+ K VG+AL+DMY K
Sbjct: 105 KMRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKI 164
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
GEI + + FDEM +N ++WT++I G + GY + + M + + + L
Sbjct: 165 GEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIAL 224
Query: 443 FACSHTGLTCEGWEL------------------FTDMINKYRILPRAEH----------- 473
A + +G G + T M NK L H
Sbjct: 225 KASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVV 284
Query: 474 -FSCVVDLFARRGQLE---SAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGE 523
++ +V + + G+ + A+ +R N+ P +SA++ C+ + GE
Sbjct: 285 SWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGE 338
>gi|357443809|ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481230|gb|AES62433.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 912
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 182/529 (34%), Positives = 292/529 (55%), Gaps = 3/529 (0%)
Query: 51 LIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
L+HAH+I G E NL L T V+ Y+K ++ A K + PE +V WT +ISG+ QN
Sbjct: 239 LLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNL 298
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
A+ VF M SG+ N FTYSS L A + + L G + ++L++ +
Sbjct: 299 QVREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGN 358
Query: 171 ALLDLYAKCGWIE-DAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
AL+D+Y KC I +A +F I +V+ W ++I G A + +DSF LF M G++
Sbjct: 359 ALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFAEKRL-EDSFQLFAEMQAAGVR 417
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
P+ FT+ +IL A L+ +H IIK ++ + +L+D YA G I A+ +
Sbjct: 418 PNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSV 477
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+M D I+ T L + + +H A + M + +D+ L L+ A + +
Sbjct: 478 IGTMNLRDSITYTCLAARLNQKGHHGM-ALKVLIHMCNDGIKMDEFSLASFLSAAAGLGT 536
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
+ G+Q+H ++ K +V N+L+ +Y+K G I DANRAF ++ + + SW LI+G
Sbjct: 537 METGKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLISG 596
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
++ +G A+ + M+ G+ P+ +T LSL+ ACSH GL G E F M +Y I P
Sbjct: 597 FSWNGLISHALSTFDDMRLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITP 656
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
+ +H+ C+VDL R G+LE A +I +M+ KP + + +L AC+++GN +LGE AR
Sbjct: 657 KLDHYMCLVDLLGRGGRLEEAMGVIEKMSFKPDSLICKTLLNACNLHGNVALGEDMARRC 716
Query: 530 FDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+++P Y++L+N+Y AG D KTR+LM ER LR++PG +++
Sbjct: 717 LELDPSDPAIYLLLANLYDNAGLSDFGEKTRRLMRERGLRRSPGQCWME 765
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 150/476 (31%), Positives = 252/476 (52%), Gaps = 7/476 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T + +L FC + + ++ IH+ II G + +L+L+ ++ YAK V AR FD M
Sbjct: 17 TCLRVLSFC-NSNSLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEM 75
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P R+VVSWT ++S + + + +AL +F M+ SG N+FT SSALR+C + + G
Sbjct: 76 PNRDVVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGM 135
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIE-DAWILFERI-ERKDVVSWNAMIGGLAM 209
I S K N FV ++L++ Y KCG +AW L + + DVVSW M+ L
Sbjct: 136 QIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVE 195
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
G ++F ++ M+ G+ P+ FT +L A + L +H +I G E + L
Sbjct: 196 NGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVL 255
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+++D+Y+K + A ++ + D+ T LISGF + + +EA +F+DM L
Sbjct: 256 KTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQ-NLQVREAISVFRDMELSG 314
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI-ADA 388
+ ++ +LN +++ SL+LG Q H+ D +GNAL+DMY K I +A
Sbjct: 315 LLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNA 374
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ F E+ NV+ WTSLIAG+A+ ++ +L+ +M+ G+ PN T ++L ACS T
Sbjct: 375 VKVFREITSPNVMCWTSLIAGFAEKRL-EDSFQLFAEMQAAGVRPNSFTMSAILGACSKT 433
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
L +I K ++ + +VD +A G ++ A+++I MN++ + +
Sbjct: 434 RSLVPTMMLHGHII-KTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMNLRDSIT 488
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 129/278 (46%), Gaps = 2/278 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T ++L C ++ ++H HII + ++ ++ ++ YA VG + A M
Sbjct: 422 TMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTM 481
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
R+ +++T + + Q G+ AL V M G++ ++F+ +S L A A + ++ G+
Sbjct: 482 NLRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETGK 541
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ K F V ++L+ LY+KCG I DA F+ I D SWN +I G + G
Sbjct: 542 QLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLISGFSWNG 601
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLT 270
+ F M G+KPD TL S++ A S GG+ + + H + + +
Sbjct: 602 LISHALSTFDDMRLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITPKLDHY 661
Query: 271 GSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALISG 307
L+D+ + G + A + M K D + C L++
Sbjct: 662 MCLVDLLGRGGRLEEAMGVIEKMSFKPDSLICKTLLNA 699
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 184/566 (32%), Positives = 307/566 (54%), Gaps = 41/566 (7%)
Query: 51 LIHAHIITNGYESNLHLSTKVI---IFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYA 107
+IHA +I G + + +K+I I + A F+ + E N++ W M G+A
Sbjct: 8 MIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHA 67
Query: 108 QNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSI---------- 157
+ +AL ++ M+ G+ N +T+ L++CA+ + + G+ I G +
Sbjct: 68 LSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLY 127
Query: 158 ----------QKGRFVE-----------NLFVKSALLDLYAKCGWIEDAWILFERIERKD 196
Q GR + ++ +AL+ YA G+IE+A +F+ I KD
Sbjct: 128 VHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKD 187
Query: 197 VVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV--GGIELMKISQI 254
VVSWNAMI G A G ++ LF+ MM+ ++PD T+ +++ A G IEL + Q+
Sbjct: 188 VVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGR--QV 245
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH 314
H I G S+ K+ +LID+Y+K G + +A L+ + D+IS LI G+ N
Sbjct: 246 HSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHM-NL 304
Query: 315 SKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA--VG 372
KEA LF++M+ +DV + +L CA++ ++++GR IH + K A +
Sbjct: 305 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLR 364
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
+LIDMYAK G+I A++ F+ + K++ SW ++I G+A HG + +++ +M+ G+
Sbjct: 365 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIE 424
Query: 433 PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYN 492
P+D+TF+ LL ACSH+G+ G +F M Y++ P+ EH+ C++DL G + A
Sbjct: 425 PDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEE 484
Query: 493 MIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGA 552
MI M ++P +W ++L AC ++GN LGE A+NL +EPE +YV+LSNIY AG
Sbjct: 485 MINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGR 544
Query: 553 WDNARKTRKLMEERSLRKNPGYSFLQ 578
W+ TR L+ ++ ++K PG S ++
Sbjct: 545 WNEVANTRALLNDKGMKKVPGCSSIE 570
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 135/420 (32%), Positives = 214/420 (50%), Gaps = 40/420 (9%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ LL+ C KA ++ IH H++ G + +L++ T +I Y + G + A K FD
Sbjct: 93 TFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDES 152
Query: 92 PERNVVSWTAMISGYAQNGYDEN-------------------------------ALLVFS 120
P R+VVS+TA+I GYA GY EN AL +F
Sbjct: 153 PHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 212
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M+++ VR ++ T + + ACA+ ++ GR + I F NL + +AL+DLY+KCG
Sbjct: 213 DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCG 272
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+E A LFE + KDV+SWN +IGG ++ LF+ M+R G P+ T+ SIL
Sbjct: 273 ELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILP 332
Query: 241 --ASVGGIELMKISQIHDLIIKL--GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT 296
A +G I++ + IH I K G+ +++ L SLID+YAK G I +A+Q++ S+L
Sbjct: 333 ACAHLGAIDIGR--WIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHK 390
Query: 297 DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI 356
+ S A+I GFA + +FD+F M + DD+ +L+ C++ L+LGR I
Sbjct: 391 SLSSWNAMIFGFAM-HGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHI 449
Query: 357 -HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHG 414
+ Y+ + +ID+ SG +A + M + + + W SL+ HG
Sbjct: 450 FRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHG 509
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 187/408 (45%), Gaps = 48/408 (11%)
Query: 9 KTGQLKQALKFSLSCPDTLLDP--STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+TG K+AL+ T + P ST ++++ C + +H+ I +G+ SNL
Sbjct: 200 ETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLK 259
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ +I Y+K G++ +A F+ +P ++V+SW +I GY + ALL+F MLRSG
Sbjct: 260 IVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG 319
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKG-RFVENL-FVKSALLDLYAKCGWIED 184
N T S L ACA + + GR I I K + V N ++++L+D+YAKCG IE
Sbjct: 320 ETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEA 379
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG 244
A +F I K + SWNAMI G AM G D SF +F M + G++PD T +L A
Sbjct: 380 AHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACS- 438
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
H ++ LG RS Q Y+ K + C
Sbjct: 439 ----------HSGMLDLGRH-----------------IFRSMTQDYKMTPKLEHYGCMID 471
Query: 305 ISGFARDDNHS---KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF 361
+ G HS KEA ++ M +M D VI C +L C ++ LG
Sbjct: 472 LLG------HSGLFKEAEEMINTM---EMEPDGVIWCSLLKACKMHGNVELGESFAQNLI 522
Query: 362 KYQSSYDAAVGNALIDMYAKSG---EIADANRAFDEMGDKNVISWTSL 406
K + + L ++YA +G E+A+ ++ G K V +S+
Sbjct: 523 KIEPENPGSY-VLLSNIYATAGRWNEVANTRALLNDKGMKKVPGCSSI 569
>gi|6016735|gb|AAF01561.1|AC009325_31 hypothetical protein [Arabidopsis thaliana]
Length = 641
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 176/565 (31%), Positives = 315/565 (55%), Gaps = 13/565 (2%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHI---ITNGYESNLHLSTKVIIFYAKVGD 80
PD P L+ C + + +IH + +T G S+L++ + +I Y K G
Sbjct: 39 PDNFTLPVA----LKACGELREVNYGEMIHGFVKKDVTLG--SDLYVGSSLIYMYIKCGR 92
Query: 81 VLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAM-LRSGVRANQFTYSSALR 139
++ A + FD + + ++V+W++M+SG+ +NG A+ F M + S V ++ T + +
Sbjct: 93 MIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVS 152
Query: 140 ACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS 199
AC ++ + GR + G + + F +L + ++LL+ YAK ++A LF+ I KDV+S
Sbjct: 153 ACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVIS 212
Query: 200 WNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLII 259
W+ +I G ++ +F MM G +P+ T+ +L+A +L + + H+L I
Sbjct: 213 WSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAI 272
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
+ GLE+ K++ +L+D+Y K S AY ++ + + D++S ALISGF + + +
Sbjct: 273 RKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLN-GMAHRSI 331
Query: 320 DLFKDMILKKMGIDDVILCL-MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDM 378
+ F M+L+ D IL + +L C+ + L + H++ KY + +G +L+++
Sbjct: 332 EEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVEL 391
Query: 379 YAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM-KHEGMVPNDVT 437
Y++ G + +A++ F+ + K+ + WTSLI GY HG G +A+E + M K + PN+VT
Sbjct: 392 YSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVT 451
Query: 438 FLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
FLS+L ACSH GL EG +F M+N YR+ P EH++ +VDL R G L++A + ++M
Sbjct: 452 FLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRM 511
Query: 498 NIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNAR 557
PT + +LGAC I+ N + E A+ LF++E + Y+++SN+Y G W+N
Sbjct: 512 PFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVE 571
Query: 558 KTRKLMEERSLRKNPGYSFLQSSKK 582
K R +++R ++K S ++ +K
Sbjct: 572 KLRNSVKQRGIKKGLAESLIEIRRK 596
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 131/485 (27%), Positives = 233/485 (48%), Gaps = 22/485 (4%)
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
M +R++ W ++ ++ E L FS M R + + FT AL+AC +R + G
Sbjct: 1 MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG 60
Query: 151 RMIQGSIQKGRFV-ENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
MI G ++K + +L+V S+L+ +Y KCG + +A +F+ +E+ D+V+W++M+ G
Sbjct: 61 EMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEK 120
Query: 210 QGFNDDSFWLFRSM-MRQGMKPDCFTLGSILRASVGGIELMKISQ------IHDLIIKLG 262
G + FR M M + PD TL +++ A K+S +H +I+ G
Sbjct: 121 NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACT------KLSNSRLGRCVHGFVIRRG 174
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
+ L SL++ YAK + + A L++ + + D+IS + +I+ + + + + EA +F
Sbjct: 175 FSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQ-NGAAAEALLVF 233
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
DM+ + + +L CA L GR+ H A + + V AL+DMY K
Sbjct: 234 NDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKC 293
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV-PNDVTFLSL 441
+A F + K+V+SW +LI+G+ +G H +IE + M E P+ + + +
Sbjct: 294 FSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKV 353
Query: 442 LFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
L +CS G E + F + KY + +V+L++R G L +A + + +K
Sbjct: 354 LGSCSELGFL-EQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKD 412
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTA---AGAWDNARK 558
T +W++++ I+G + L N E N V +I +A AG +
Sbjct: 413 TV-VWTSLITGYGIHGKGTKA-LETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLR 470
Query: 559 TRKLM 563
KLM
Sbjct: 471 IFKLM 475
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 195/389 (50%), Gaps = 13/389 (3%)
Query: 9 KTGQLKQALKF---SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNL 65
K G QA++F + D D T ++L+ C R +H +I G+ ++L
Sbjct: 120 KNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDL 179
Query: 66 HLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
L ++ YAK A F + E++V+SW+ +I+ Y QNG ALLVF+ M+
Sbjct: 180 SLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDD 239
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIED 184
G N T L+ACA L+ GR +I+KG E + V +AL+D+Y KC E+
Sbjct: 240 GTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETE-VKVSTALVDMYMKCFSPEE 298
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM-MRQGMKPDCFTLGSILR--A 241
A+ +F RI RKDVVSW A+I G + G S F M + +PD + +L +
Sbjct: 299 AYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCS 358
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC 301
+G +E K H +IK G +S+ + SL+++Y++ GS+ +A +++ + D +
Sbjct: 359 ELGFLEQAKC--FHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVW 416
Query: 302 TALISGFARDDNHSKEAFDLFKDMIL-KKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
T+LI+G+ +K A + F M+ ++ ++V +L+ C++ ++ G +I
Sbjct: 417 TSLITGYGIHGKGTK-ALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLM 475
Query: 361 FK-YQSSYDAAVGNALIDMYAKSGEIADA 388
Y+ + + L+D+ + G++ A
Sbjct: 476 VNDYRLAPNLEHYAVLVDLLGRVGDLDTA 504
>gi|357154827|ref|XP_003576915.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like, partial [Brachypodium distachyon]
Length = 735
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 186/533 (34%), Positives = 292/533 (54%), Gaps = 7/533 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H ++ G +S ++L ++ Y K G V ++ K F+ MPERN VSW + I + G
Sbjct: 199 VHGLVLKTGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGL 258
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ L +F M G T SS L A + + GR + G K ++FV ++
Sbjct: 259 YGDVLALFRGMSERGFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANS 318
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+D+YAK G +E A +FE+IE ++VVSWNAMI L G ++F L M + G P+
Sbjct: 319 LVDMYAKFGSLEKACAVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPN 378
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
TL ++L A L QIH I+ GL ++ +LID+YAK G +R A ++
Sbjct: 379 SITLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIF- 437
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLM--LNICANVAS 349
+ + D +S LI G+++ S E+ +LFK L +GI+ + M L C N++S
Sbjct: 438 DLSEKDDVSYNTLILGYSQSP-WSFESLNLFKQ--LSSVGIEYDAISFMGALTACTNLSS 494
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
G++IH + S + N L+ +Y K G + A++ F+ + +K+V SW ++I G
Sbjct: 495 FKQGKEIHGVLVRRLLSNHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMG 554
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
Y HG A L+ MK G+ + V+++++L CSH GL G + F+ M+ + + P
Sbjct: 555 YGMHGQIDAAFHLFDLMKDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHMLAQ-NLEP 613
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
+ H++C+VDL R GQL + +I M + +W A+LGAC I+GN L + AA +L
Sbjct: 614 QQMHYACMVDLLGRSGQLTESVEIILDMPFHANSDVWGALLGACRIHGNIELAQYAADHL 673
Query: 530 FDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
F+++PE S Y VL N+Y AG W+ A K R LM+ R ++KNP YS++QS K
Sbjct: 674 FELKPEHSGYYSVLRNMYAEAGRWNEAHKIRTLMKSRKVQKNPAYSWVQSGNK 726
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 147/498 (29%), Positives = 263/498 (52%), Gaps = 14/498 (2%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HA + +G+ +++ ++ FYA G AR+ FD MP R+VVSW +++S + N
Sbjct: 98 LHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFLANKM 157
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
++A +M+RSGV N + S + AC + G + G + K + + +A
Sbjct: 158 FDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIVNLGNA 217
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+D+Y K G +E + +FE + ++ VSWN+ IG G D LFR M +G P
Sbjct: 218 LVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLALFRGMSERGFMPG 277
Query: 232 CFTLGSILRASV--GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
TL S+L A V G +L + ++H IK +E + SL+D+YAK+GS+ A +
Sbjct: 278 SITLSSLLPALVELGYFDLGR--EVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKACAV 335
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ + +++S A+I+ ++ S EAF L M + + L +L C+ +AS
Sbjct: 336 FEKIEVRNVVSWNAMIANLVQNGAES-EAFGLVIKMQKDGECPNSITLVNLLPACSRMAS 394
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
L G+QIHA++ + +D + NALIDMYAK G++ A FD + +K+ +S+ +LI G
Sbjct: 395 LKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIFD-LSEKDDVSYNTLILG 453
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
Y++ + E++ L+K++ G+ + ++F+ L AC++ +G E+ ++ R+L
Sbjct: 454 YSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHGVLVR--RLLS 511
Query: 470 RAEHFS-CVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARN 528
+ ++ L+ + G L++A + ++ K AS W+ ++ ++G AA +
Sbjct: 512 NHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVAS-WNNMIMGYGMHGQID----AAFH 566
Query: 529 LFDMEPEKSVNYVVLSNI 546
LFD+ + V Y +S I
Sbjct: 567 LFDLMKDHGVTYDHVSYI 584
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/451 (28%), Positives = 222/451 (49%), Gaps = 27/451 (5%)
Query: 75 YAKVGDVLSARKAFDRMPER--NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQF 132
YA + D+ S+R P R + W ++ + ALLV++ MLRSGV +
Sbjct: 16 YAALSDLASSRLLLFHHPLRLRSAFLWNSLSRALSSASLPTEALLVYNHMLRSGVSPDDR 75
Query: 133 TYSSALRACARMRWL---QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILF 189
T+ AL A A +G + +++ G + +F + L+ YA CG DA +F
Sbjct: 76 TFPFALHAAAAAAQAHPAKGLELHAAALRSGHLAD-VFAGNTLVAFYAACGHAGDARRVF 134
Query: 190 ERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA----SVGG 245
+ + +DVVSWN+++ DD+ SMMR G+ + +L S++ A GG
Sbjct: 135 DEMPARDVVSWNSLVSSFLANKMFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGG 194
Query: 246 IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALI 305
L +H L++K GL+S L +L+D+Y K+G + ++ +++ M + + +S + I
Sbjct: 195 FGL----GVHGLVLKTGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAI 250
Query: 306 SGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS 365
F + + LF+ M + + L +L + +LGR++H ++ K
Sbjct: 251 GCFLNAGLYG-DVLALFRGMSERGFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAM 309
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKK 425
D V N+L+DMYAK G + A F+++ +NV+SW ++IA ++G EA L K
Sbjct: 310 ELDIFVANSLVDMYAKFGSLEKACAVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIK 369
Query: 426 MKHEGMVPNDVTFLSLLFACSH-----TGLTCEGWELFTDMINKYRILPRAEHFSCVVDL 480
M+ +G PN +T ++LL ACS TG W + T ++ I + ++D+
Sbjct: 370 MQKDGECPNSITLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFI------SNALIDM 423
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILG 511
+A+ GQL A + I ++ K S + ILG
Sbjct: 424 YAKCGQLRLAQS-IFDLSEKDDVSYNTLILG 453
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 131/271 (48%), Gaps = 5/271 (1%)
Query: 23 CPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVL 82
CP+++ T ++LL C + + IHA I G +L +S +I YAK G +
Sbjct: 376 CPNSI----TLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLR 431
Query: 83 SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA 142
A+ FD + E++ VS+ +I GY+Q+ + +L +F + G+ + ++ AL AC
Sbjct: 432 LAQSIFD-LSEKDDVSYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACT 490
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
+ + G+ I G + + + F+ + LL LY K G ++ A +F RI+ KDV SWN
Sbjct: 491 NLSSFKQGKEIHGVLVRRLLSNHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNN 550
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
MI G M G D +F LF M G+ D + ++L G + + + ++
Sbjct: 551 MIMGYGMHGQIDAAFHLFDLMKDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHMLAQN 610
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
LE ++D+ + G + + ++ M
Sbjct: 611 LEPQQMHYACMVDLLGRSGQLTESVEIILDM 641
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 82/184 (44%), Gaps = 1/184 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D ++M L C + + +Q IH ++ ++ L+ ++ Y K G + +A K F
Sbjct: 478 DAISFMGALTACTNLSSFKQGKEIHGVLVRRLLSNHPFLANTLLGLYTKGGMLDTASKIF 537
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+R+ E++V SW MI GY +G + A +F M GV + +Y + L C+ ++
Sbjct: 538 NRIKEKDVASWNNMIMGYGMHGQIDAAFHLFDLMKDHGVTYDHVSYIAVLSVCSHGGLVE 597
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWI-EDAWILFERIERKDVVSWNAMIGGL 207
G+ + + ++DL + G + E I+ + + W A++G
Sbjct: 598 RGKKYFSHMLAQNLEPQQMHYACMVDLLGRSGQLTESVEIILDMPFHANSDVWGALLGAC 657
Query: 208 AMQG 211
+ G
Sbjct: 658 RIHG 661
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 15/175 (8%)
Query: 353 GRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAK 412
G ++HA A + D GN L+ YA G DA R FDEM ++V+SW SL++ +
Sbjct: 95 GLELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFLA 154
Query: 413 HGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT-----GLTCEGWELFTDMINKYRI 467
+ +A + M G+ N + +S++ AC GL G L T + + +
Sbjct: 155 NKMFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIVNL 214
Query: 468 LPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA---CSIYGNT 519
+ +VD++ + G +E++ + M + S W++ +G +YG+
Sbjct: 215 ------GNALVDMYGKFGHVEASMKVFEGMPERNEVS-WNSAIGCFLNAGLYGDV 262
>gi|334185017|ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g01580
gi|332640170|gb|AEE73691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 176/565 (31%), Positives = 315/565 (55%), Gaps = 13/565 (2%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHI---ITNGYESNLHLSTKVIIFYAKVGD 80
PD P L+ C + + +IH + +T G S+L++ + +I Y K G
Sbjct: 58 PDNFTLPVA----LKACGELREVNYGEMIHGFVKKDVTLG--SDLYVGSSLIYMYIKCGR 111
Query: 81 VLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAM-LRSGVRANQFTYSSALR 139
++ A + FD + + ++V+W++M+SG+ +NG A+ F M + S V ++ T + +
Sbjct: 112 MIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVS 171
Query: 140 ACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS 199
AC ++ + GR + G + + F +L + ++LL+ YAK ++A LF+ I KDV+S
Sbjct: 172 ACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVIS 231
Query: 200 WNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLII 259
W+ +I G ++ +F MM G +P+ T+ +L+A +L + + H+L I
Sbjct: 232 WSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAI 291
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
+ GLE+ K++ +L+D+Y K S AY ++ + + D++S ALISGF + + +
Sbjct: 292 RKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLN-GMAHRSI 350
Query: 320 DLFKDMILKKMGIDDVILCL-MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDM 378
+ F M+L+ D IL + +L C+ + L + H++ KY + +G +L+++
Sbjct: 351 EEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVEL 410
Query: 379 YAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM-KHEGMVPNDVT 437
Y++ G + +A++ F+ + K+ + WTSLI GY HG G +A+E + M K + PN+VT
Sbjct: 411 YSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVT 470
Query: 438 FLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
FLS+L ACSH GL EG +F M+N YR+ P EH++ +VDL R G L++A + ++M
Sbjct: 471 FLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRM 530
Query: 498 NIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNAR 557
PT + +LGAC I+ N + E A+ LF++E + Y+++SN+Y G W+N
Sbjct: 531 PFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVE 590
Query: 558 KTRKLMEERSLRKNPGYSFLQSSKK 582
K R +++R ++K S ++ +K
Sbjct: 591 KLRNSVKQRGIKKGLAESLIEIRRK 615
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 136/502 (27%), Positives = 240/502 (47%), Gaps = 22/502 (4%)
Query: 74 FYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFT 133
F K + AR+ F M +R++ W ++ ++ E L FS M R + + FT
Sbjct: 3 FCRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFT 62
Query: 134 YSSALRACARMRWLQGGRMIQGSIQKGRFV-ENLFVKSALLDLYAKCGWIEDAWILFERI 192
AL+AC +R + G MI G ++K + +L+V S+L+ +Y KCG + +A +F+ +
Sbjct: 63 LPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDEL 122
Query: 193 ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM-MRQGMKPDCFTLGSILRASVGGIELMKI 251
E+ D+V+W++M+ G G + FR M M + PD TL +++ A K+
Sbjct: 123 EKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACT------KL 176
Query: 252 SQ------IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALI 305
S +H +I+ G + L SL++ YAK + + A L++ + + D+IS + +I
Sbjct: 177 SNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVI 236
Query: 306 SGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS 365
+ + + + + EA +F DM+ + + +L CA L GR+ H A +
Sbjct: 237 ACYVQ-NGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGL 295
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKK 425
+ V AL+DMY K +A F + K+V+SW +LI+G+ +G H +IE +
Sbjct: 296 ETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSI 355
Query: 426 MKHEGMV-PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
M E P+ + + +L +CS G E + F + KY + +V+L++R
Sbjct: 356 MLLENNTRPDAILMVKVLGSCSELGFL-EQAKCFHSYVIKYGFDSNPFIGASLVELYSRC 414
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLS 544
G L +A + + +K T +W++++ I+G + L N E N V
Sbjct: 415 GSLGNASKVFNGIALKDTV-VWTSLITGYGIHGKGTKA-LETFNHMVKSSEVKPNEVTFL 472
Query: 545 NIYTA---AGAWDNARKTRKLM 563
+I +A AG + KLM
Sbjct: 473 SILSACSHAGLIHEGLRIFKLM 494
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 195/389 (50%), Gaps = 13/389 (3%)
Query: 9 KTGQLKQALKF---SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNL 65
K G QA++F + D D T ++L+ C R +H +I G+ ++L
Sbjct: 139 KNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDL 198
Query: 66 HLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
L ++ YAK A F + E++V+SW+ +I+ Y QNG ALLVF+ M+
Sbjct: 199 SLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDD 258
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIED 184
G N T L+ACA L+ GR +I+KG E + V +AL+D+Y KC E+
Sbjct: 259 GTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETE-VKVSTALVDMYMKCFSPEE 317
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM-MRQGMKPDCFTLGSILR--A 241
A+ +F RI RKDVVSW A+I G + G S F M + +PD + +L +
Sbjct: 318 AYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCS 377
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC 301
+G +E K H +IK G +S+ + SL+++Y++ GS+ +A +++ + D +
Sbjct: 378 ELGFLEQAKC--FHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVW 435
Query: 302 TALISGFARDDNHSKEAFDLFKDMIL-KKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
T+LI+G+ +K A + F M+ ++ ++V +L+ C++ ++ G +I
Sbjct: 436 TSLITGYGIHGKGTK-ALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLM 494
Query: 361 FK-YQSSYDAAVGNALIDMYAKSGEIADA 388
Y+ + + L+D+ + G++ A
Sbjct: 495 VNDYRLAPNLEHYAVLVDLLGRVGDLDTA 523
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 195/557 (35%), Positives = 308/557 (55%), Gaps = 18/557 (3%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITN--GYESNLHLSTKVIIFYAK--VGDVLSARKA 87
+++S LQ C K +Q IHA II ++ L +ST++ A+ D A
Sbjct: 24 SFLSTLQTCKSIKGLKQ---IHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSL 80
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDE-NALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
++ N+ + A+I G A + D L+V+ ML G+ + +T L+ACA R
Sbjct: 81 LAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRA 140
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
++ G + G K +++V + L+ +YA C I A +F+ ++D+VSW MI G
Sbjct: 141 VREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQG 200
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLE 264
GF + LF M + ++ D TL +L A +G + L + ++H II+
Sbjct: 201 YVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGR--KLHRYIIRNSNV 258
Query: 265 SSNKLTG-SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
+ + G +L+D+Y K G A ++++ M +++S ++ISG A+ KE+ +F+
Sbjct: 259 NLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQK-GQFKESLYMFR 317
Query: 324 DMILKKMGI--DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
M +++G+ DDV L +LN CAN+ L LG+ +HA+ + Q D +GNAL+DMYAK
Sbjct: 318 KM--QRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAK 375
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
G I A F M K+V S+T++I G A HG G +A++L+ +M G+ P++VTF+ +
Sbjct: 376 CGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGV 435
Query: 442 LFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
L ACSH GL EG + F DM Y + P+ EH+ C+VDL R G + A IR M I+P
Sbjct: 436 LTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEP 495
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRK 561
A + A+LGAC I+G LGE + + +EP K YV++SNIY++A W +A K RK
Sbjct: 496 DAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRK 555
Query: 562 LMEERSLRKNPGYSFLQ 578
M+ER+L K PG S ++
Sbjct: 556 TMKERNLEKTPGCSSIE 572
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/393 (32%), Positives = 209/393 (53%), Gaps = 12/393 (3%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T +L+ C + +A R+ +H I G S++++S ++ YA + SARK F
Sbjct: 124 DNYTIPFVLKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVF 183
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D P+R++VSWT MI GY + G+ + +F M ++A+ T L +CAR+ L+
Sbjct: 184 DTSPQRDLVSWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLR 243
Query: 149 GGRMIQGSIQKGRFVE-NLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
GR + I + V ++FV +AL+D+Y KCG A +F+ + K+VVSWN+MI GL
Sbjct: 244 LGRKLHRYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGL 303
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLES 265
A +G +S ++FR M R G+KPD TL ++L A++G +EL K +H + + + +
Sbjct: 304 AQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGK--WVHAYLDRNQIRA 361
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ +L+D+YAK GSI A ++++M + D+ S TA+I G A K A DLF +M
Sbjct: 362 DGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGK-ALDLFSEM 420
Query: 326 ILKKMGI--DDVILCLMLNICANVASLNLGRQ-IHAFAFKYQSSYDAAVGNALIDMYAKS 382
KMGI D+V +L C++V + GR+ + Y ++D+ ++
Sbjct: 421 --PKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRA 478
Query: 383 GEIADANRAFDEMG-DKNVISWTSLIAGYAKHG 414
G I +A M + + +L+ HG
Sbjct: 479 GLINEAEEFIRNMPIEPDAFVLGALLGACKIHG 511
>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
Length = 825
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 171/552 (30%), Positives = 309/552 (55%), Gaps = 4/552 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T ++L+ C++ + +H +I G E++ L+ +I Y+K A + F R+
Sbjct: 264 TLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARI 323
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
E +VV + MIS + ++ A +F M GV+ NQ+T+ +R + R
Sbjct: 324 DEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCR 383
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I I K F V A++ +Y K G ++DA + F+ ++ D+ SWN ++ G
Sbjct: 384 SIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGN 443
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
+ +F+ ++ +G+ + +T ILR ++L Q+H ++K G + ++
Sbjct: 444 NCEHGLRIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSK 503
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
L+D+Y + G +A ++ + + D+ S T ++S +A+ D K A + F+ M+ +
Sbjct: 504 MLLDMYVQAGCFTNARLVFDRLKERDVFSWTVVMSTYAKTDEGEK-AIECFRSMLRENKR 562
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAV-GNALIDMYAKSGEIADANR 390
+D L L++C+++A L G Q+H++ K S ++++V +AL+DMY K G +ADA
Sbjct: 563 PNDATLATSLSVCSDLACLGSGLQLHSYTIK--SGWNSSVVSSALVDMYVKCGNLADAEM 620
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
FDE +++ W ++I GYA+HG+G++A+E +++M EG VP+++TF+ +L ACSH GL
Sbjct: 621 LFDESDTHDLVEWNTIICGYAQHGHGYKALEAFQEMIDEGNVPDEITFVGVLSACSHAGL 680
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
EG F + + Y I P EH++C+VD+ A+ G+L A ++I +M + P ASLW IL
Sbjct: 681 LDEGRRYFKLLSSVYGITPTLEHYACMVDILAKAGKLAEAESLINEMPLTPDASLWKTIL 740
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
GAC ++GN + E AA LF+ +P+ + ++LSNIY W++ K R ++ +R ++K
Sbjct: 741 GACRMHGNIEIAERAAEKLFESQPDDISSCILLSNIYADLKRWNDVAKLRSMLVDRGVKK 800
Query: 571 NPGYSFLQSSKK 582
PG S+++ + K
Sbjct: 801 EPGCSWIEINGK 812
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 128/419 (30%), Positives = 216/419 (51%), Gaps = 9/419 (2%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
+Y + LQ C +A R+ +HA ++ +G + L ++ Y K G + AR FD M
Sbjct: 62 SYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGM 121
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P R+VV+WTAM+S G AL +F+ M GV N F ++AL+AC L
Sbjct: 122 PHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTP 181
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW-ILFERIERKDVVSWNAMIGGLAMQ 210
+ K + + +V S+L++ Y CG ++ A L + R D VSWNA++ A
Sbjct: 182 QVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSD-VSWNALLNEYARD 240
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKL 269
G +F ++ G + +TL ++L+ + + L K Q +H L+IK GLE+ L
Sbjct: 241 GDYAKVMLVFDKLVESGDEISKYTLPTVLKCCM-ELGLAKSGQAVHGLVIKRGLETDRVL 299
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
LI++Y+K S AY+++ + + D++ C+ +IS F R D + EAFD+F M +
Sbjct: 300 NNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHD-MAPEAFDIF--MQMSD 356
Query: 330 MGI--DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
MG+ + + + + +NL R IHA K S V +A++ MY K+G + D
Sbjct: 357 MGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQD 416
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A AFD M ++ SW +L++G+ + ++K++ EG++ N T++ +L C+
Sbjct: 417 AILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCT 475
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 136/521 (26%), Positives = 254/521 (48%), Gaps = 21/521 (4%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HA + + ++S+ ++ Y G+V A +A P R+ VSW A+++ YA++G
Sbjct: 183 VHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDGD 242
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+LVF ++ SG +++T + L+ C + + G+ + G + K + + +
Sbjct: 243 YAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNC 302
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+++Y+KC EDA+ +F RI+ DVV + MI ++F +F M G+KP+
Sbjct: 303 LIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPN 362
Query: 232 CFTLG--SILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
+T +I+ + G + L + IH I+K G + + +++ +Y K G+++ A
Sbjct: 363 QYTFVGLAIVASRTGDVNLCR--SIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILA 420
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ M DI S L+SGF N+ + +FK++I + + + +L C ++
Sbjct: 421 FDLMQGPDIASWNTLLSGF-YSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCTSLMD 479
Query: 350 LNLGRQIHAFAFK--YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI 407
L G Q+HA K +Q YD V L+DMY ++G +A FD + +++V SWT ++
Sbjct: 480 LRFGCQVHACVLKSGFQGDYD--VSKMLLDMYVQAGCFTNARLVFDRLKERDVFSWTVVM 537
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMIN---K 464
+ YAK G +AIE ++ M E PND T + L CS G +L + I
Sbjct: 538 STYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACLGSGLQLHSYTIKSGWN 597
Query: 465 YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGEL 524
++ A +VD++ + G L A + + + W+ I+ + +G+
Sbjct: 598 SSVVSSA-----LVDMYVKCGNLADAEMLFDESDTHDLVE-WNTIICGYAQHGHGYKALE 651
Query: 525 AARNLFDME--PEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
A + + D P++ + +V + + + AG D R+ KL+
Sbjct: 652 AFQEMIDEGNVPDE-ITFVGVLSACSHAGLLDEGRRYFKLL 691
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 165/328 (50%), Gaps = 4/328 (1%)
Query: 124 RSGVRANQF-TYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWI 182
R +RA + +Y++AL+ CA R L+ G+ + + + + F+ +LL++Y KCG +
Sbjct: 52 RLRLRAEELRSYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRL 111
Query: 183 EDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS 242
DA +F+ + +DVV+W AM+ + G + LF M +G+ P+ F L + L+A
Sbjct: 112 ADARSVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKAC 171
Query: 243 VGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQ-LYRSMLKTDIISC 301
G +L Q+H +KL ++ SL++ Y G + A + L S +++D +S
Sbjct: 172 TVGSDLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSD-VSW 230
Query: 302 TALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF 361
AL++ +ARD +++K +F ++ I L +L C + G+ +H
Sbjct: 231 NALLNEYARDGDYAKVML-VFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVI 289
Query: 362 KYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIE 421
K D + N LI+MY+K DA F + + +V+ + +I+ + +H EA +
Sbjct: 290 KRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFD 349
Query: 422 LYKKMKHEGMVPNDVTFLSLLFACSHTG 449
++ +M G+ PN TF+ L S TG
Sbjct: 350 IFMQMSDMGVKPNQYTFVGLAIVASRTG 377
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 161/337 (47%), Gaps = 13/337 (3%)
Query: 21 LSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGD 80
L C L + TY+ +L+ C R +HA ++ +G++ + +S ++ Y + G
Sbjct: 455 LICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGC 514
Query: 81 VLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRA 140
+AR FDR+ ER+V SWT ++S YA+ E A+ F +MLR R N T +++L
Sbjct: 515 FTNARLVFDRLKERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSV 574
Query: 141 CARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSW 200
C+ + L G + K + ++ V SAL+D+Y KCG + DA +LF+ + D+V W
Sbjct: 575 CSDLACLGSGLQLHSYTIKSGWNSSV-VSSALVDMYVKCGNLADAEMLFDESDTHDLVEW 633
Query: 201 NAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIK 260
N +I G A G + F+ M+ +G PD T +L A L + + L+
Sbjct: 634 NTIICGYAQHGHGYKALEAFQEMIDEGNVPDEITFVGVLSACSHAGLLDEGRRYFKLLSS 693
Query: 261 L-GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH----S 315
+ G+ + + ++D+ AK G + A L M T S I G R +
Sbjct: 694 VYGITPTLEHYACMVDILAKAGKLAEAESLINEMPLTPDASLWKTILGACRMHGNIEIAE 753
Query: 316 KEAFDLFKDMILKKMGIDDVILCLML-NICANVASLN 351
+ A LF+ DD+ C++L NI A++ N
Sbjct: 754 RAAEKLFESQ------PDDISSCILLSNIYADLKRWN 784
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 117/245 (47%), Gaps = 2/245 (0%)
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN 313
+H +++ G L SL+++Y K G + A ++ M D+++ TA++S +
Sbjct: 82 LHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGMPHRDVVAWTAMVSAITAAGD 141
Query: 314 HSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN 373
+ A LF +M + + + L L C + L Q+HA A K + +D V +
Sbjct: 142 -AGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTPQVHAQAVKLEGLFDPYVSS 200
Query: 374 ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP 433
+L++ Y GE+ A RA + ++ +SW +L+ YA+ G + + ++ K+ G
Sbjct: 201 SLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDGDYAKVMLVFDKLVESGDEI 260
Query: 434 NDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNM 493
+ T ++L C GL G + +I + R + +C+++++++ E AY +
Sbjct: 261 SKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLN-NCLIEMYSKCLSAEDAYEV 319
Query: 494 IRQMN 498
+++
Sbjct: 320 FARID 324
>gi|297833250|ref|XP_002884507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330347|gb|EFH60766.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 676
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 181/543 (33%), Positives = 300/543 (55%), Gaps = 14/543 (2%)
Query: 52 IHAHIITNG-----YESNLHLSTKVI-----IFYAKVGDVLSARKAFDRMPERNVVSWTA 101
+HA I+ N ++++H + V+ Y K G + A K FD MP R+V+S
Sbjct: 67 LHASIVKNPEFFDPVDADIHRNALVVWNSLLSLYVKCGKLGDALKLFDEMPVRDVISQNI 126
Query: 102 MISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGR 161
+ G+ +N E+ ++ ML SG +Q T + L C + +MI
Sbjct: 127 VFYGFLRNRETESGFVLLKRMLGSG-GFDQATLTIVLSVCDTPEFCLVTKMIHALAILSG 185
Query: 162 FVENLFVKSALLDLYAKCGW-IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLF 220
+ + + V + L+ Y KCG + W+ F + ++V++W A+I GL ++D LF
Sbjct: 186 YDKEISVGNKLITSYFKCGCSVSGRWV-FSEMAHRNVITWTAVISGLIENELHEDGLRLF 244
Query: 221 RSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKY 280
M R + P+ T S L A G +++ QIH L+ K G+ES + +L+D+Y+K
Sbjct: 245 CLMRRGLVHPNSVTYLSALAACSGSQMIVEGQQIHALLWKFGIESELCIESALMDMYSKC 304
Query: 281 GSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLM 340
GSI A++++ S + D +S T ++ G A++ + +EA F M+ + ID ++ +
Sbjct: 305 GSIEDAWKIFESSQEVDEVSMTVILVGLAQNGS-EEEAIQFFIRMLQAGVEIDANVVSAI 363
Query: 341 LNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNV 400
L + SL LG+Q+H+ K + + V N LI+MY+K G++ D+ F M +N
Sbjct: 364 LGVSFVDNSLGLGKQLHSLVIKRKFCGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNY 423
Query: 401 ISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTD 460
+SW S+IA +A+HG+G A++LY++M + P DVTFLSLL ACSH GL +G EL +
Sbjct: 424 VSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNE 483
Query: 461 MINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTS 520
M + I PR EH++C++D+ R G ++ A + I + +KP +W A+LGACS +G+T
Sbjct: 484 MKEVHGIKPRTEHYTCIIDMLGRAGLMKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTE 543
Query: 521 LGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSS 580
+GE AA LF+ P+ S +++++NIY++ G W KT K M+E + K G S+++
Sbjct: 544 VGEYAAEQLFETAPDSSAAHILMANIYSSRGKWKERAKTIKRMKEMGVTKETGISWIEME 603
Query: 581 KKN 583
KK
Sbjct: 604 KKT 606
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/393 (30%), Positives = 199/393 (50%), Gaps = 11/393 (2%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
D +T +L C + +IHA I +GY+ + + K+I Y K G +S R
Sbjct: 153 FDQATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRWV 212
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F M RNV++WTA+ISG +N E+ L +F M R V N TY SAL AC+ + +
Sbjct: 213 FSEMAHRNVITWTAVISGLIENELHEDGLRLFCLMRRGLVHPNSVTYLSALAACSGSQMI 272
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ I + K L ++SAL+D+Y+KCG IEDAW +FE + D VS ++ GL
Sbjct: 273 VEGQQIHALLWKFGIESELCIESALMDMYSKCGSIEDAWKIFESSQEVDEVSMTVILVGL 332
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A G +++ F M++ G++ D + +IL S L Q+H L+IK +
Sbjct: 333 AQNGSEEEAIQFFIRMLQAGVEIDANVVSAILGVSFVDNSLGLGKQLHSLVIKRKFCGNT 392
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ LI++Y+K G + + ++R M K + +S ++I+ FAR H A L+++M
Sbjct: 393 FVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFAR-HGHGLAALKLYEEMTT 451
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQI-----HAFAFKYQSSYDAAVGNALIDMYAKS 382
++ DV +L+ C++V ++ GR++ K ++ + + IDM ++
Sbjct: 452 LEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIKPRTEHYTCI----IDMLGRA 507
Query: 383 GEIADANRAFDEMGDK-NVISWTSLIAGYAKHG 414
G + +A D + K + W +L+ + HG
Sbjct: 508 GLMKEAKSFIDSLPLKPDCKIWQALLGACSFHG 540
>gi|297828580|ref|XP_002882172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328012|gb|EFH58431.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 638
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 175/563 (31%), Positives = 312/563 (55%), Gaps = 9/563 (1%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN-GYESNLHLSTKVIIFYAKVGDVL 82
PD P L+ C + + + +IH + N S+L++ + +I Y K G +
Sbjct: 39 PDNFTLPVA----LKACGELREVKYGEMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMT 94
Query: 83 SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLR-SGVRANQFTYSSALRAC 141
A + F+ + + ++V+W++M+SG+ +NG A+ F M S V ++ T + + AC
Sbjct: 95 EALRMFNELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMATASDVTPDRVTLITLVSAC 154
Query: 142 ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN 201
++ + GR + G + + F +L + ++LL+ YAK ++A LF+ + KDV+SW+
Sbjct: 155 TKLSNSRLGRCVHGFVMRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWS 214
Query: 202 AMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKL 261
+I G ++ +F M+ G +P+ T+ +L+A +L + + H+L I+
Sbjct: 215 TVIACYVQNGAAAEALRVFNEMIDDGTEPNVATVLCVLQACAAANDLEQGRKTHELAIRK 274
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDL 321
GLE+ K++ +L+D+Y K S AY ++ + K D++S ALISGF + + + +
Sbjct: 275 GLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPKKDVVSWVALISGFTLN-GMAHRSIEE 333
Query: 322 FKDMILKKMGIDDVILCL-MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYA 380
F M+L+ D IL L +L C+ + L H++ KY + +G +L+++Y+
Sbjct: 334 FSIMLLENNTRPDAILMLKVLGSCSELGFLKQAECFHSYVIKYGFDSNPFIGASLVELYS 393
Query: 381 KSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV-PNDVTFL 439
+ G + +A++ F+E+ K+ + WTSLI GY HG G +A+E + M V PN+VTFL
Sbjct: 394 RCGSLGNASKVFNEIALKDTVVWTSLITGYGIHGKGTKALETFNHMVRSSEVKPNEVTFL 453
Query: 440 SLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
S+L ACSH GL EG +F M+N YR+ P EH++ +VDL R G+L++A + ++M
Sbjct: 454 SILSACSHAGLIHEGLRIFELMVNDYRLAPNLEHYAVLVDLLGRVGELDTAIEITKRMPF 513
Query: 500 KPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKT 559
PT + +LGAC I+ N + E A+ LF++E + Y+++SN+Y G W+N K
Sbjct: 514 SPTPQILGTLLGACRIHQNGEMAETVAKQLFELESNHAGYYMLMSNMYGVKGEWENVEKL 573
Query: 560 RKLMEERSLRKNPGYSFLQSSKK 582
R +++R ++K S ++ +K
Sbjct: 574 RNSVKQRGIKKGLAESLIEIRRK 596
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 218/436 (50%), Gaps = 18/436 (4%)
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
M +R + W ++ +++ + E + FS M R + + FT AL+AC +R ++ G
Sbjct: 1 MTKRTLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYG 60
Query: 151 RMIQGSIQKGRFV-ENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
MI G ++K + +L+V S+L+ +Y KCG + +A +F +E+ D+V+W++M+ G
Sbjct: 61 EMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEK 120
Query: 210 QGFNDDSFWLFRSMMRQG-MKPDCFTLGSILRASVGGIELMKISQ------IHDLIIKLG 262
G + FR M + PD TL +++ A K+S +H +++ G
Sbjct: 121 NGSPYQAVEFFRRMATASDVTPDRVTLITLVSACT------KLSNSRLGRCVHGFVMRRG 174
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
+ L SL++ YAK + + A L++ M + D+IS + +I+ + + + + EA +F
Sbjct: 175 FSNDLSLVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQ-NGAAAEALRVF 233
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
+MI + + +L CA L GR+ H A + + V AL+DMY K
Sbjct: 234 NEMIDDGTEPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKC 293
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV-PNDVTFLSL 441
+A F + K+V+SW +LI+G+ +G H +IE + M E P+ + L +
Sbjct: 294 FSPEEAYAVFSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKV 353
Query: 442 LFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
L +CS G + E F + KY + +V+L++R G L +A + ++ +K
Sbjct: 354 LGSCSELGFLKQA-ECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKD 412
Query: 502 TASLWSAILGACSIYG 517
T +W++++ I+G
Sbjct: 413 TV-VWTSLITGYGIHG 427
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 194/388 (50%), Gaps = 11/388 (2%)
Query: 9 KTGQLKQALKF---SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNL 65
K G QA++F + D D T ++L+ C R +H ++ G+ ++L
Sbjct: 120 KNGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDL 179
Query: 66 HLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
L ++ YAK A F M E++V+SW+ +I+ Y QNG AL VF+ M+
Sbjct: 180 SLVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDD 239
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIED 184
G N T L+ACA L+ GR +I+KG E + V +AL+D+Y KC E+
Sbjct: 240 GTEPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETE-VKVSTALVDMYMKCFSPEE 298
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM-MRQGMKPDCFTLGSILRASV 243
A+ +F RI +KDVVSW A+I G + G S F M + +PD + +L S
Sbjct: 299 AYAVFSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVL-GSC 357
Query: 244 GGIELMKISQ-IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCT 302
+ +K ++ H +IK G +S+ + SL+++Y++ GS+ +A +++ + D + T
Sbjct: 358 SELGFLKQAECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWT 417
Query: 303 ALISGFARDDNHSKEAFDLFKDMIL-KKMGIDDVILCLMLNICANVASLNLGRQIHAFAF 361
+LI+G+ +K A + F M+ ++ ++V +L+ C++ ++ G +I
Sbjct: 418 SLITGYGIHGKGTK-ALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFELMV 476
Query: 362 K-YQSSYDAAVGNALIDMYAKSGEIADA 388
Y+ + + L+D+ + GE+ A
Sbjct: 477 NDYRLAPNLEHYAVLVDLLGRVGELDTA 504
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 180/526 (34%), Positives = 289/526 (54%), Gaps = 38/526 (7%)
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F+ + E N++ W M G+A N AL ++ M+ G+ N +++ L++CA+ + L
Sbjct: 22 FETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKAL 81
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER---------------- 191
G+ I G + K + +++V ++L+ +YA+ G +EDA +F+R
Sbjct: 82 IEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGY 141
Query: 192 ---------------IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLG 236
I KDVVSWNAMI G ++ L++ MM+ +KPD T+
Sbjct: 142 ASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMV 201
Query: 237 SILRASV--GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML 294
+++ A G IEL + Q+H I G S+ K+ LID+Y+K G + +A L++ +
Sbjct: 202 TVVSACAQSGSIELGR--QLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLA 259
Query: 295 KTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGR 354
K D+IS LI G N KEA LF++M+ +DV + +L CA++ ++++GR
Sbjct: 260 KKDVISWNTLIGGHTHM-NLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGR 318
Query: 355 QIHAFAFKYQSSYDAAVG--NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAK 412
IH + K A +LIDMYAK G+I A + FD M +++ SW ++I G+A
Sbjct: 319 WIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAM 378
Query: 413 HGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAE 472
HG + A +L+ KM+ G+ P+D+TF+ LL ACSH+G+ G +F M Y+I P+ E
Sbjct: 379 HGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLE 438
Query: 473 HFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDM 532
H+ C++DL G + A MIR M ++P +W ++L AC ++ N LGE A+NL +
Sbjct: 439 HYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKI 498
Query: 533 EPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
EPE +YV+LSNIY AG WD K R L+ ++ ++K PG S ++
Sbjct: 499 EPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIE 544
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 144/470 (30%), Positives = 234/470 (49%), Gaps = 45/470 (9%)
Query: 16 ALKFSLSCPDTLLDPSTY--MSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVII 73
ALK + L P++Y LL+ C KA + IH H++ GY+ +++++T +I
Sbjct: 49 ALKLYVCMISLGLLPNSYSFPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLIS 108
Query: 74 FYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDEN------------------- 114
YA+ G + A K FDR R+VVS+TA+I+GYA GY N
Sbjct: 109 MYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAM 168
Query: 115 ------------ALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRF 162
AL ++ M+++ V+ ++ T + + ACA+ ++ GR + I+ F
Sbjct: 169 ISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGF 228
Query: 163 VENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRS 222
N+ + + L+DLY+KCG +E A LF+ + +KDV+SWN +IGG ++ LF+
Sbjct: 229 GSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQE 288
Query: 223 MMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKL--GLESSNKLTGSLIDVYA 278
M+R G P+ T+ S+L A +G I++ + IH I K G+ +++ L SLID+YA
Sbjct: 289 MLRSGESPNDVTMLSVLPACAHLGAIDIGR--WIHVYINKRLKGVTNASSLLTSLIDMYA 346
Query: 279 KYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILC 338
K G I +A Q++ SML + S A+I GFA + AFDLF M + DD+
Sbjct: 347 KCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGK-ANAAFDLFSKMRKNGIDPDDITFV 405
Query: 339 LMLNICANVASLNLGRQI-HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG- 396
+L+ C++ L+LGR I + + Y+ + +ID+ G +A M
Sbjct: 406 GLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPM 465
Query: 397 DKNVISWTSLIAGYAKHGYGHEAIELYKK--MKHEGMVPNDVTFLSLLFA 444
+ + + W SL+ H E E Y + +K E P LS ++A
Sbjct: 466 EPDGVIWCSLLKACKMHN-NVELGESYAQNLIKIEPENPGSYVLLSNIYA 514
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 207/415 (49%), Gaps = 43/415 (10%)
Query: 188 LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIE 247
+FE I+ +++ WN M G A+ + + L+ M+ G+ P+ ++ +L++
Sbjct: 21 IFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKA 80
Query: 248 LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG 307
L++ QIH ++KLG + + SLI +YA+ G + A++++ ++S TALI+G
Sbjct: 81 LIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITG 140
Query: 308 FAR------------------------------DDNHSKEAFDLFKDMILKKMGIDDVIL 337
+A + + KEA +L+KDM+ + D+ +
Sbjct: 141 YASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTM 200
Query: 338 CLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD 397
+++ CA S+ LGRQ+H++ + + + N LID+Y+K GE+ A F +
Sbjct: 201 VTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAK 260
Query: 398 KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWEL 457
K+VISW +LI G+ EA+ L+++M G PNDVT LS+L AC+H G G +
Sbjct: 261 KDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWI 320
Query: 458 FTDMINKYRILPRAEH-FSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIY 516
+ + + + A + ++D++A+ G +E+A + M + +S W+A++ +++
Sbjct: 321 HVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSS-WNAMIFGFAMH 379
Query: 517 GNTSLGELAARNLFD------MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
G + AA +LF ++P+ + +V L + + +G D R + M +
Sbjct: 380 GKAN----AAFDLFSKMRKNGIDPD-DITFVGLLSACSHSGMLDLGRHIFRSMSQ 429
>gi|297808809|ref|XP_002872288.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318125|gb|EFH48547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 690
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 183/569 (32%), Positives = 315/569 (55%), Gaps = 2/569 (0%)
Query: 15 QALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIF 74
+ K L+CP + D TY ++++ E +IH ++ +G+ ++ +++ ++
Sbjct: 91 KVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLGRMIHTVVVKSGHVCDVVVASSLVGM 150
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
YAK + + FD MPER+V SW +IS + Q G E AL +F M RS N +
Sbjct: 151 YAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQRGDAEKALELFGRMERSDFEPNSVSI 210
Query: 135 SSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER 194
+ A+ AC+R+ L+ G+ I K F + +V SAL+D+Y +C ++E A +F+++ R
Sbjct: 211 TVAISACSRLLCLERGKEIHRKYLKKEFELDEYVNSALVDMYGRCDFLEMAREVFQQMRR 270
Query: 195 KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQI 254
K +V+WN+MI G +G + L M+ +G +P TL SIL A L+ +
Sbjct: 271 KSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFV 330
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH 314
H +I+ +++ + SLID+Y K G ++ A ++ K + S +ISG+ N
Sbjct: 331 HGYVIRSVVDADIYINCSLIDLYFKCGEVKLAETVFLKTQKDVVESWNVMISGYVSVGNW 390
Query: 315 SKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNA 374
K A D++ M+ + D V +L+ C+ +A+L G+QIH + + D + +A
Sbjct: 391 FK-AVDVYDQMVSVGVQPDIVTFTSVLSTCSQLAALEKGKQIHLSISESRLETDELLLSA 449
Query: 375 LIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
L+DMY+K G + +A+R F+ + K+V+SWT +I+ Y HG EA+ + +M+ G+ P+
Sbjct: 450 LLDMYSKCGNVKEASRIFNSIPKKDVVSWTVMISAYGSHGQPREALYHFDEMQKFGVKPD 509
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI 494
VTFL++L AC H GL EG + F+ M +KY I E +SC++D+ R G+L AY ++
Sbjct: 510 GVTFLAVLSACGHAGLIDEGVKYFSQMRSKYGIEASIEQYSCLIDILGRAGRLLEAYGIL 569
Query: 495 RQM-NIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAW 553
+Q + A L S + AC ++ + LG A+ L + P+ + Y VL N+Y + +W
Sbjct: 570 QQKPETRDNAELLSTLFCACCLHRDHLLGYTIAKLLVEKYPDDASTYTVLFNLYASGESW 629
Query: 554 DNARKTRKLMEERSLRKNPGYSFLQSSKK 582
D A++ R M+E +RK PG S+++ ++K
Sbjct: 630 DAAKRVRLKMKEVGMRKKPGCSWIEMNEK 658
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 139/522 (26%), Positives = 256/522 (49%), Gaps = 9/522 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
++ S +SLL+ C + K+ RQA L+H I+T G S++ L +I Y D SAR
Sbjct: 1 MESSKLLSLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLV 60
Query: 88 FDRMPER-NVVSWTAMISGYAQNGYDENALLVFSAMLRSGV-RANQFTYSSALRACARMR 145
F+ + R +V W +++SGY++N + L VF +L + + FTY + ++A +
Sbjct: 61 FENIDIRSDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALG 120
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
GRMI + K V ++ V S+L+ +YAK ED+ +F+ + +DV SWN +I
Sbjct: 121 REFLGRMIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVIS 180
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
+G + + LF M R +P+ ++ + A + L + +IH +K E
Sbjct: 181 SFYQRGDAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFEL 240
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGF-ARDDNHSKEAFDLFKD 324
+ +L+D+Y + + A ++++ M + +++ ++I G+ AR D SK +L
Sbjct: 241 DEYVNSALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGD--SKSCVELLNR 298
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
MI++ L +L C+ +L G+ +H + + D + +LID+Y K GE
Sbjct: 299 MIIEGTRPSQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGE 358
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ A F + V SW +I+GY G +A+++Y +M G+ P+ VTF S+L
Sbjct: 359 VKLAETVFLKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLST 418
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
CS +G ++ I++ R+ S ++D++++ G ++ A + + K S
Sbjct: 419 CSQLAALEKGKQIHLS-ISESRLETDELLLSALLDMYSKCGNVKEASRIFNSIPKKDVVS 477
Query: 505 LWSAILGACSIYGNT--SLGELAARNLFDMEPEKSVNYVVLS 544
W+ ++ A +G +L F ++P+ VLS
Sbjct: 478 -WTVMISAYGSHGQPREALYHFDEMQKFGVKPDGVTFLAVLS 518
>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 701
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 182/519 (35%), Positives = 295/519 (56%), Gaps = 3/519 (0%)
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSA 121
+S++ + + +I Y+K G + A K F P+ +VV WT++I+GY QNG E AL FS
Sbjct: 136 DSDMFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGSPELALAFFSR 195
Query: 122 ML-RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M+ V + T SA ACA++ GR + G +++ F L + +++L+LY K G
Sbjct: 196 MVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTG 255
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
I A LF + KD++SW++M+ A G ++ LF M+ + ++ + T+ S LR
Sbjct: 256 SIRIAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALR 315
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
A L + QIH L + G E ++ +L+D+Y K S +A +L+ M K D++S
Sbjct: 316 ACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNRMPKKDVVS 375
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
L SG+A + + ++ +F +M+ D + L +L + + + +HAF
Sbjct: 376 WAVLFSGYA-EIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQALCLHAFV 434
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
K + +G +LI++YAK I +AN+ F + +V++W+S+IA Y HG G EA+
Sbjct: 435 TKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAYGFHGQGEEAL 494
Query: 421 ELYKKM-KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD 479
+L +M H + PNDVTF+S+L ACSH GL EG ++F M+N+Y+++P EH+ +VD
Sbjct: 495 KLSHQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNIEHYGIMVD 554
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVN 539
L R G+L+ A +MI M ++ +W A+LGAC I+ N +GELAA NLF ++P +
Sbjct: 555 LLGRMGELDKALDMINNMPMQAGPHVWGALLGACRIHQNIKIGELAALNLFLLDPNHAGY 614
Query: 540 YVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
Y +LSNIY W +A K R L++E L+K G S ++
Sbjct: 615 YTLLSNIYCVDKNWHDAAKLRTLIKENRLKKIVGQSMVE 653
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 150/522 (28%), Positives = 256/522 (49%), Gaps = 43/522 (8%)
Query: 34 MSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPE 93
+ LL+ C K + Q +H+ + G + + TK+ + YA+ + A K F+ P
Sbjct: 8 VKLLETCCSKISITQ---LHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETPC 64
Query: 94 RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV---RANQFTYSSALRACARMRWLQGG 150
+ V W A++ Y G L +F M V R + +T S AL++C+ ++ L+ G
Sbjct: 65 KTVYLWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELG 124
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+MI G ++K + ++FV SAL++LY+KCG + DA +F + DVV W ++I G
Sbjct: 125 KMIHGFLKK-KIDSDMFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQN 183
Query: 211 GFNDDSFWLF-RSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
G + + F R ++ + + PD TL S A + +H + + G ++ L
Sbjct: 184 GSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCL 243
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
S++++Y K GSIR A L+R M DIIS +++++ +A D+ A +LF +MI K+
Sbjct: 244 ANSILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYA-DNGAETNALNLFNEMIDKR 302
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ ++ V + L CA+ ++L G+QIH A Y D V AL+DMY K +A
Sbjct: 303 IELNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAI 362
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA----- 444
F+ M K+V+SW L +GYA+ G H+++ ++ M G P+ + + +L A
Sbjct: 363 ELFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELG 422
Query: 445 ------CSHTGLTCEGW-----------ELF---TDMINKYRILPRAEH-----FSCVVD 479
C H +T G+ EL+ + + N ++ H +S ++
Sbjct: 423 IVQQALCLHAFVTKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIA 482
Query: 480 LFARRGQLESAYNMIRQM----NIKPTASLWSAILGACSIYG 517
+ GQ E A + QM ++KP + +IL ACS G
Sbjct: 483 AYGFHGQGEEALKLSHQMSNHSDVKPNDVTFVSILSACSHAG 524
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 134/268 (50%), Gaps = 2/268 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L+ T +S L+ C + IH + G+E ++ +ST ++ Y K +A +
Sbjct: 305 LNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIEL 364
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F+RMP+++VVSW + SGYA+ G +L VF ML +G R + L A + + +
Sbjct: 365 FNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIV 424
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
Q + + K F N F+ ++L++LYAKC I++A +F+ + DVV+W+++I
Sbjct: 425 QQALCLHAFVTKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAY 484
Query: 208 AMQGFNDDSFWLFRSMMRQG-MKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLES 265
G +++ L M +KP+ T SIL A S G+ I H ++ + L
Sbjct: 485 GFHGQGEEALKLSHQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMP 544
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ + G ++D+ + G + A + +M
Sbjct: 545 NIEHYGIMVDLLGRMGELDKALDMINNM 572
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 336 ILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEM 395
+L +L C + S+ Q+H+ K + D+ V L +YA+ + A++ F+E
Sbjct: 6 LLVKLLETCCSKISIT---QLHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEET 62
Query: 396 GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV---PNDVTFLSLLFACSHTGLTC 452
K V W +L+ Y G E + L+ +M + + P++ T L +CS GL
Sbjct: 63 PCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCS--GL-- 118
Query: 453 EGWELFTDMIN---KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
+ EL MI+ K +I S +++L+++ GQ+ A + + KP LW++I
Sbjct: 119 QKLEL-GKMIHGFLKKKIDSDMFVGSALIELYSKCGQMNDAVKVFTEYP-KPDVVLWTSI 176
Query: 510 LGACSIYGNTSLG 522
+ G+ L
Sbjct: 177 ITGYEQNGSPELA 189
>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 776
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 176/542 (32%), Positives = 297/542 (54%), Gaps = 13/542 (2%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y+ LL C++ A +H H++ G +++ ++T ++ Y + AR+ FD MP
Sbjct: 79 YVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMP 138
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
++NVV+WTA+I+G+ N AL VF ML G + +T L AC+ R + G+
Sbjct: 139 DKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQ 198
Query: 153 IQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM-Q 210
+ G SI+ G + ++L LY K G +E F+ K+V++W MI A +
Sbjct: 199 VHGYSIKYGADTIT-SMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCAEDE 257
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
+ D LF M+ G+ P+ FTL S++ +++ Q+ K+G E++ +
Sbjct: 258 NYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVK 317
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFA------RDDNHSK----EAFD 320
S + +Y + G A +L+ M + II+ A+ISG+A +DD H++ +A
Sbjct: 318 NSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALK 377
Query: 321 LFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYA 380
LF+D++ ++ D +L++C+ + +L G QIHA K D V +AL++MY
Sbjct: 378 LFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYN 437
Query: 381 KSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
K G I A +AF EM + ++WTS+I+GY++HG +AI+L++ M G PN++TF+S
Sbjct: 438 KCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVS 497
Query: 441 LLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIK 500
LL ACS+ GL E F M N+Y I P +H+ C+VD+F R G+L+ A++ I++ +
Sbjct: 498 LLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRTGFE 557
Query: 501 PTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTR 560
P ++WS+++ C +GN L AA L +++P+ YV+L N+Y + G W + + R
Sbjct: 558 PNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVIETYVLLLNMYISTGRWRDVARVR 617
Query: 561 KL 562
KL
Sbjct: 618 KL 619
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/446 (25%), Positives = 210/446 (47%), Gaps = 15/446 (3%)
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAM--LRSGVRANQFTYSSALRACARM 144
AFD+ S A+ +G ++ L AM LR G Y L C
Sbjct: 30 AFDKGTSYQRSSAQALENGRLEHESPPRPLDAQEAMGMLRDGQTVQSAMYVPLLHRCVEA 89
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
L R + G + K ++FV ++L+++Y +C DA LF+ + K+VV+W A+I
Sbjct: 90 GGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMPDKNVVTWTALI 149
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G + + +F M+ G P +TLG +L A + Q+H IK G +
Sbjct: 150 TGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQVHGYSIKYGAD 209
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ + SL +Y K G + S + ++ ++I+ T +IS A D+N+ LF D
Sbjct: 210 TITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCAEDENYLDLGLSLFLD 269
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M+ + ++ L ++++C ++LG+Q+ AF +K + V N+ + +Y + GE
Sbjct: 270 MLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTMYLYLRKGE 329
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAK-----------HGYGHEAIELYKKMKHEGMVP 433
+A R F+EM ++I+W ++I+GYA+ G +A++L++ + + P
Sbjct: 330 TDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKLFRDLVRSELKP 389
Query: 434 NDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNM 493
+ TF S+L CS +G ++ + I K L S +V+++ + G +E A
Sbjct: 390 DLFTFSSILSVCSAMMALEQGEQIHANTI-KTGCLSDVVVNSALVNMYNKCGSIECATKA 448
Query: 494 IRQMNIKPTASLWSAILGACSIYGNT 519
+M + T W++++ S +G +
Sbjct: 449 FVEMPTR-TPVTWTSMISGYSQHGRS 473
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 192/401 (47%), Gaps = 17/401 (4%)
Query: 30 PSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
PS Y +L C + +H + I G ++ + + Y K GD+ S +A
Sbjct: 175 PSHYTLGGMLSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRA 234
Query: 88 FDRMPERNVVSWTAMISGYAQN-GYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
F P++NV++WT MIS A++ Y + L +F ML GV N+FT +S + C
Sbjct: 235 FKGTPDKNVITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLD 294
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
+ G+ +Q K NL VK++ + LY + G ++A LFE ++ +++WNAMI G
Sbjct: 295 MSLGKQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISG 354
Query: 207 LA--MQGFNDD---------SFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIH 255
A M DD + LFR ++R +KPD FT SIL + L + QIH
Sbjct: 355 YAQIMDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIH 414
Query: 256 DLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHS 315
IK G S + +L+++Y K GSI A + + M ++ T++ISG+++ S
Sbjct: 415 ANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQ-HGRS 473
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDAAVGNA 374
++A LF+DM+L +++ +L+ C+ + R +Y
Sbjct: 474 QDAIQLFEDMVLSGARPNEITFVSLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGC 533
Query: 375 LIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHG 414
++DM+ + G + DA G + N W+SL+AG HG
Sbjct: 534 MVDMFVRLGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSHG 574
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 109/209 (52%), Gaps = 6/209 (2%)
Query: 15 QALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVI 72
QALK + L P T+ S+L C A Q IHA+ I G S++ +++ ++
Sbjct: 374 QALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALV 433
Query: 73 IFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQF 132
Y K G + A KAF MP R V+WT+MISGY+Q+G ++A+ +F M+ SG R N+
Sbjct: 434 NMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEI 493
Query: 133 TYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK-SALLDLYAKCGWIEDAWILFER 191
T+ S L AC+ ++ ++ +E L ++D++ + G ++DA+ +R
Sbjct: 494 TFVSLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKR 553
Query: 192 --IERKDVVSWNAMIGGLAMQGFNDDSFW 218
E + + W++++ G G + +F+
Sbjct: 554 TGFEPNEAI-WSSLVAGCRSHGNMELAFY 581
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 175/520 (33%), Positives = 287/520 (55%), Gaps = 15/520 (2%)
Query: 63 SNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAM 122
+++ + + +I A+ GD+ SARK FD + E+ VV WT +IS Y Q E A+ +F
Sbjct: 186 TDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDF 245
Query: 123 LRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG-- 180
L G +++T SS + AC + ++ G + + + V L+D+YAK
Sbjct: 246 LEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIG 305
Query: 181 -WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFW-LFRSMMRQGMKPDCFTLGSI 238
++ A +FER+ + DV+SW A+I G G ++ LF M+ + +KP+ T SI
Sbjct: 306 QAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSI 365
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
L++ + Q+H +IK S++ + +L+ +YA+ G + A +++ + + +
Sbjct: 366 LKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSM 425
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
I C RD F L ++ +GI +++ A+V L G+Q+HA
Sbjct: 426 IPCIT----EGRD-------FPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHA 474
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHE 418
+ K D V N+L+ MY++ G + DA R+F+E+ D+NVISWTS+I+G AKHGY
Sbjct: 475 MSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAER 534
Query: 419 AIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVV 478
A+ L+ M G+ PNDVT++++L ACSH GL EG E F M + ++PR EH++C+V
Sbjct: 535 ALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMV 594
Query: 479 DLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSV 538
DL AR G ++ A I +M +K A +W +LGAC + N +GE+ A+N+ ++EP
Sbjct: 595 DLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELEPRDPA 654
Query: 539 NYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
YV+LSN+Y AG WD + R M + +L K G S+++
Sbjct: 655 PYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWME 694
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/487 (27%), Positives = 239/487 (49%), Gaps = 43/487 (8%)
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPE-RNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
++ ++ Y++ G V SAR FD M R++VSWTAM S A+NG + +LL+ ML S
Sbjct: 86 VANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERGSLLLIGEMLES 145
Query: 126 GVRANQFTYSSALRAC--ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIE 183
G+ N +T +A AC + L GG ++ + G + ++ V SAL+D+ A+ G +
Sbjct: 146 GLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGLWGTDVAVGSALIDMLARNGDLA 205
Query: 184 DAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-- 241
A +F+ + K VV W +I +++ LF + G +PD +T+ S++ A
Sbjct: 206 SARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFLEDGFEPDRYTMSSMISACT 265
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYG---SIRSAYQLYRSMLKTDI 298
+G + L Q+H L +++GL S ++ L+D+YAK ++ A +++ M K D+
Sbjct: 266 ELGSVRLGL--QLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERMPKNDV 323
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
IS TALISG+ + + LF +M+ + + + + +L CA+++ + GRQ+HA
Sbjct: 324 ISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSGRQVHA 383
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVI----------------- 401
K + VGNAL+ MYA+SG + +A R F+++ ++++I
Sbjct: 384 HVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIPCITEGRDFPLDHRIVR 443
Query: 402 --------SWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCE 453
++ SLI+ A G + +L+ G + SL+ S G +
Sbjct: 444 MDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLED 503
Query: 454 GWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM---NIKPTASLWSAIL 510
F ++ ++ I ++ ++ A+ G E A ++ M +KP + A+L
Sbjct: 504 ACRSFNELKDRNVI-----SWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVL 558
Query: 511 GACSIYG 517
ACS G
Sbjct: 559 SACSHVG 565
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 206/412 (50%), Gaps = 27/412 (6%)
Query: 14 KQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKV 71
++A++ L + +P Y S++ C + + R +H+ + G S+ +S +
Sbjct: 236 EEAVELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGL 295
Query: 72 IIFYAK--VGDVLS-ARKAFDRMPERNVVSWTAMISGYAQNGYDENALL-VFSAMLRSGV 127
+ YAK +G + A K F+RMP+ +V+SWTA+ISGY Q+G EN ++ +F ML +
Sbjct: 296 VDMYAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESI 355
Query: 128 RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWI 187
+ N TYSS L++CA + GR + + K V +AL+ +YA+ G +E+A
Sbjct: 356 KPNHITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARR 415
Query: 188 LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIE 247
+F ++ + ++ +G + F L ++R + T S++ A+
Sbjct: 416 VFNQLYERSMIP-------CITEGRD---FPLDHRIVRMDVGISSSTFASLISAAASVGM 465
Query: 248 LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG 307
L K Q+H + +K G S ++ SL+ +Y++ G + A + + + ++IS T++ISG
Sbjct: 466 LTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISG 525
Query: 308 FARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSY 367
A+ +++ A LF DMIL + +DV +L+ C++V + G++ F+
Sbjct: 526 LAK-HGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEY----FRSMQRD 580
Query: 368 DAAVGN-----ALIDMYAKSGEIADANRAFDEMGDK-NVISWTSLIAGYAKH 413
+ ++D+ A+SG + +A +EM K + + W +L+ H
Sbjct: 581 HGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSH 632
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 187/549 (34%), Positives = 311/549 (56%), Gaps = 13/549 (2%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
+ SLLQ C+ K +Q IHA ++TN ++H + A + D A F +
Sbjct: 35 FNSLLQQCLSIKQLKQ---IHAQLLTN----SIHKPNSFLYKIADLKDFAYASVFFSNIL 87
Query: 93 ERNVVSWTAMISGYAQNGYDEN--ALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+ S+ MI G + ++++ AL +S M G++ N TY AC+ + ++ G
Sbjct: 88 DPTEYSFNVMIRGLS-TAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENG 146
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
RM S+ + E+ V +L+ +YA+CG + DA +F+ I +KD+VSWN+MI G +
Sbjct: 147 RMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKM 206
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
++ LFR MM G +P+ +L S+L A +L + + + +++ + + +
Sbjct: 207 RHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMG 266
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
+LI +Y K G + SA +++ SM K D ++ A+I+G+A++ S+EA LF+DM +
Sbjct: 267 SALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQN-GMSEEAIKLFQDMRMSST 325
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
D + L +L+ CA++ +L+LG+Q+ +A + D VG AL+DMYAK G + +A R
Sbjct: 326 APDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFR 385
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG--MVPNDVTFLSLLFACSHT 448
F M +KN +SW ++I+ A HG EA+ L+K M +EG + PND+TF+ +L AC H
Sbjct: 386 VFYGMPNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHA 445
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
GL EG LF M + + ++P+ EH+SC+VDLF+R G LE A++ + M KP + A
Sbjct: 446 GLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGA 505
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+LGAC N + E + L ++EP S NYV+ S +Y WD++ + R LM+++ +
Sbjct: 506 LLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGV 565
Query: 569 RKNPGYSFL 577
K PG S++
Sbjct: 566 SKTPGCSWI 574
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 197/362 (54%), Gaps = 8/362 (2%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
TY L C + A + H +I G + + H+S +I YA+ G + ARK FD +
Sbjct: 129 TYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEI 188
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
++++VSW +MISGY++ + A+ +F M+ +G + N+ + S L AC + L+ G
Sbjct: 189 SQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGT 248
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
++ + + + N F+ SAL+ +Y KCG + A +F+ +++KD V+WNAMI G A G
Sbjct: 249 WVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNG 308
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLESSNKL 269
++++ LF+ M PD TL IL AS+G ++L K Q+ + G + +
Sbjct: 309 MSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGK--QVEIYASERGFQDDVYV 366
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK- 328
+L+D+YAK GS+ +A++++ M + +S A+IS A ++EA LFK M+ +
Sbjct: 367 GTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAF-HGQAQEALALFKSMMNEG 425
Query: 329 -KMGIDDVILCLMLNICANVASLNLGRQI-HAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ +D+ +L+ C + ++ GR++ H + + + ++D+++++G +
Sbjct: 426 GTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLE 485
Query: 387 DA 388
+A
Sbjct: 486 EA 487
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 12 QLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKV 71
+L Q ++ S + PD + T + +L C A + + G++ ++++ T +
Sbjct: 315 KLFQDMRMSSTAPDQI----TLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTAL 370
Query: 72 IIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG--VRA 129
+ YAK G + +A + F MP +N VSW AMIS A +G + AL +F +M+ G V
Sbjct: 371 VDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSP 430
Query: 130 NQFTYSSALRACARMRWLQGGR----MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
N T+ L AC + GR M+ S V + S ++DL+++ G +E+A
Sbjct: 431 NDITFVGVLSACVHAGLVDEGRRLFHMMSSSFG---LVPKIEHYSCMVDLFSRAGHLEEA 487
Query: 186 W-ILFERIERKDVVSWNAMIGG 206
W + E+ D V A++G
Sbjct: 488 WDFVMTMPEKPDEVILGALLGA 509
>gi|414869047|tpg|DAA47604.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 694
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 174/524 (33%), Positives = 292/524 (55%), Gaps = 6/524 (1%)
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G N+ ++ ++ YAK G + AR+ FD MP RN+VSW A+I+GY + A+ +F
Sbjct: 121 GLADNVFPASALLDVYAKCGRLGDARRVFDGMPVRNIVSWNAIIAGYTDSRKPAEAMELF 180
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
M R G + T++ L A RW R + G I K L +A + Y++C
Sbjct: 181 LEMQRVGSVPDGTTFAVLLATIAGPRWYSLMRQLHGKIVKYGSALGLVALNAAITAYSQC 240
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ-GMKPDCFTLGSI 238
+ D+ +F+ IE +D++SWN+M+G A G +D++ F MMR+ G++PD ++ S
Sbjct: 241 DALADSRKIFDGIESRDLISWNSMLGAYAYHGLDDEAMRFFVRMMRESGIQPDMYSFTSA 300
Query: 239 LRA-SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGS---IRSAYQLYRSML 294
+ S G + + IH L+IK GLE + ++I +Y ++ + AY + S++
Sbjct: 301 ISVCSEHGCDDQQGRSIHSLVIKFGLEGVTPVCNAMIAMYTRFADNCMMEDAYNCFSSLV 360
Query: 295 KTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGR 354
D +S ++++G++ S +A F+ M + + D+ L L C+++A L LGR
Sbjct: 361 FKDAVSWNSMLTGYSHH-GLSSDALKFFRCMRAENIRTDEFGLSAALRSCSDLAVLRLGR 419
Query: 355 QIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG 414
Q+H+ + + + V ++LI MY+K G + DA ++F+E + + W S++ GYA+HG
Sbjct: 420 QVHSLVVQSGFASNDFVSSSLIFMYSKCGVLGDARKSFEEADKSSSVPWNSMMFGYAQHG 479
Query: 415 YGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF 474
+L+ +M + + VTF++L+ A SH GL EG E+ M +Y+I R EH+
Sbjct: 480 QAQTVTDLFNEMLDLEVPLDHVTFVALITAYSHGGLVDEGSEILNTMETRYKIPMRMEHY 539
Query: 475 SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEP 534
+C VDL+ R GQL+ A +I M +P A +W +LGAC I+GN L AR+LF EP
Sbjct: 540 ACGVDLYGRAGQLDKAKELIESMPFQPDAIVWMTLLGACRIHGNMELASDVARHLFVAEP 599
Query: 535 EKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+ YV+LS++Y+ G W + +K+M R+L K PG+S+++
Sbjct: 600 RQHSTYVLLSSMYSGLGMWSDRATVQKVMRNRALSKIPGWSWIE 643
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 132/535 (24%), Positives = 250/535 (46%), Gaps = 24/535 (4%)
Query: 47 RQAHLI-----HAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTA 101
RQ H + HA ++ +G S + +++ Y+ G + +AR+ FD +P + SW +
Sbjct: 4 RQHHALAAAKSHATLLKSGASSPTPWN-QLLTAYSATG-LAAARRVFDEIPHPDAASWNS 61
Query: 102 MISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGR 161
+++ + G +A + AM G+ A+ F SALR+ A R + G +Q +
Sbjct: 62 LLAAHVAAGAHRDAWRLLRAMHARGLAASTFALGSALRSAAAARRPELGAQLQSFSVRCG 121
Query: 162 FVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFR 221
+N+F SALLD+YAKCG + DA +F+ + +++VSWNA+I G ++ LF
Sbjct: 122 LADNVFPASALLDVYAKCGRLGDARRVFDGMPVRNIVSWNAIIAGYTDSRKPAEAMELFL 181
Query: 222 SMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYG 281
M R G PD T +L G + Q+H I+K G + I Y++
Sbjct: 182 EMQRVGSVPDGTTFAVLLATIAGPRWYSLMRQLHGKIVKYGSALGLVALNAAITAYSQCD 241
Query: 282 SIRSAYQLYRSMLKTDIISCTALISGFAR---DDNHSKEAFDLFKDMILKKMGI--DDVI 336
++ + +++ + D+IS +++ +A DD EA F M +++ GI D
Sbjct: 242 ALADSRKIFDGIESRDLISWNSMLGAYAYHGLDD----EAMRFFVRM-MRESGIQPDMYS 296
Query: 337 LCLMLNICANVASLN-LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE---IADANRAF 392
+++C+ + GR IH+ K+ V NA+I MY + + + DA F
Sbjct: 297 FTSAISVCSEHGCDDQQGRSIHSLVIKFGLEGVTPVCNAMIAMYTRFADNCMMEDAYNCF 356
Query: 393 DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTC 452
+ K+ +SW S++ GY+ HG +A++ ++ M+ E + ++ + L +CS +
Sbjct: 357 SSLVFKDAVSWNSMLTGYSHHGLSSDALKFFRCMRAENIRTDEFGLSAALRSCSDLAVLR 416
Query: 453 EGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
G ++ + ++ + S ++ ++++ G L A + + K ++ W++++
Sbjct: 417 LGRQVHS-LVVQSGFASNDFVSSSLIFMYSKCGVLGDARKSFEEAD-KSSSVPWNSMMFG 474
Query: 513 CSIYGNTSLGELAARNLFDME-PEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
+ +G + D+E P V +V L Y+ G D + ME R
Sbjct: 475 YAQHGQAQTVTDLFNEMLDLEVPLDHVTFVALITAYSHGGLVDEGSEILNTMETR 529
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 87/177 (49%), Gaps = 2/177 (1%)
Query: 37 LQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNV 96
L+ C D R +H+ ++ +G+ SN +S+ +I Y+K G + ARK+F+ + +
Sbjct: 406 LRSCSDLAVLRLGRQVHSLVVQSGFASNDFVSSSLIFMYSKCGVLGDARKSFEEADKSSS 465
Query: 97 VSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGS 156
V W +M+ GYAQ+G + +F+ ML V + T+ + + A + + G I +
Sbjct: 466 VPWNSMMFGYAQHGQAQTVTDLFNEMLDLEVPLDHVTFVALITAYSHGGLVDEGSEILNT 525
Query: 157 IQKGRFVENLFVKSAL-LDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGGLAMQG 211
++ + A +DLY + G ++ A L E + + D + W ++G + G
Sbjct: 526 METRYKIPMRMEHYACGVDLYGRAGQLDKAKELIESMPFQPDAIVWMTLLGACRIHG 582
>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
Length = 770
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 177/547 (32%), Positives = 298/547 (54%), Gaps = 11/547 (2%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y+ LL C++ + A +H H+ G +++ ++T ++ Y + G AR+ FD MP
Sbjct: 81 YVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMP 140
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
ERNVV+WTA+++GY N L VF ML G + +T + L AC + G+
Sbjct: 141 ERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQ 200
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM-QG 211
+ G K + ++L LYAK G ++ A F RI K+V++W MI A +
Sbjct: 201 VHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEE 260
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
+ LF M+ G+ P+ FTL S++ ++L Q+ K+G E++ +
Sbjct: 261 CVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKN 320
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFA------RDDNHSK----EAFDL 321
S + +Y + G A +L+ M II+ A+ISG+A +DD ++ +A +
Sbjct: 321 STMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTI 380
Query: 322 FKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
F+D+ M D +L++C+ + +L G QIHA K D V +AL++MY K
Sbjct: 381 FRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNK 440
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
G I DAN+AF EM + ++WTS+I+GY++HG EAI+L+++M+ G+ PN++TF+SL
Sbjct: 441 CGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSL 500
Query: 442 LFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
L ACS+ GL E F M +Y I P +H+ C++D+F R G++E A++ I++ +P
Sbjct: 501 LSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEP 560
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRK 561
++WS+++ C +GN L AA L +++P+ Y++L N+Y + W + + RK
Sbjct: 561 NEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRK 620
Query: 562 LMEERSL 568
LM++ +
Sbjct: 621 LMKQEDV 627
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 202/408 (49%), Gaps = 13/408 (3%)
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
ML G Y L C M L R + G + K ++FV ++L++ Y +CG
Sbjct: 69 MLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGA 128
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
DA LF+ + ++VV+W A++ G + +F M+ G P +TLG+ L A
Sbjct: 129 ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNA 188
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC 301
+ ++ Q+H IK G ES + SL +YAK GS+ SA + + + + ++I+
Sbjct: 189 CLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITW 248
Query: 302 TALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF 361
T +IS A D+ + LF DM++ + ++ L ++++C LNLG+Q+ AF+F
Sbjct: 249 TTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSF 308
Query: 362 KYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAK--------- 412
K + V N+ + +Y + GE +A R F++M D ++I+W ++I+GYA+
Sbjct: 309 KIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDL 368
Query: 413 --HGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
G +A+ +++ +K M P+ TF S+L CS +G ++ I K L
Sbjct: 369 QARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTI-KSGFLSD 427
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
S +V+++ + G ++ A +M + T W++++ S +G
Sbjct: 428 VVVNSALVNMYNKCGCIQDANKAFLEMPTR-TFVTWTSMISGYSQHGQ 474
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 156/325 (48%), Gaps = 13/325 (4%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T S++ C + + A G E+NL + + Y + G+ A + F++M
Sbjct: 283 TLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQM 342
Query: 92 PERNVVSWTAMISGYAQ---NGYDE--------NALLVFSAMLRSGVRANQFTYSSALRA 140
+ ++++W AMISGYAQ + D+ AL +F + RS ++ + FT+SS L
Sbjct: 343 EDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSV 402
Query: 141 CARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSW 200
C+ M L+ G I K F+ ++ V SAL+++Y KCG I+DA F + + V+W
Sbjct: 403 CSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTW 462
Query: 201 NAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIK 260
+MI G + G ++ LF M G++P+ T S+L A + + D++ K
Sbjct: 463 TSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKK 522
Query: 261 -LGLESSNKLTGSLIDVYAKYGSIRSAYQ-LYRSMLKTDIISCTALISGFARDDNHSKEA 318
+E G +ID++ + G + A+ + R+ + + ++L++G N
Sbjct: 523 EYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAF 582
Query: 319 FDLFKDMILKKMGIDDVILCLMLNI 343
+ K + LK GI+ IL L + I
Sbjct: 583 YAADKLLELKPKGIETYILLLNMYI 607
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 118/226 (52%), Gaps = 10/226 (4%)
Query: 8 FKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHL 67
F+ + + LK S+ PD T+ S+L C A Q IHA I +G+ S++ +
Sbjct: 375 FQALTIFRDLKRSVMKPDLF----TFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVV 430
Query: 68 STKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV 127
++ ++ Y K G + A KAF MP R V+WT+MISGY+Q+G + A+ +F M +GV
Sbjct: 431 NSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGV 490
Query: 128 RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK-SALLDLYAKCGWIEDAW 186
R N+ T+ S L AC+ ++ ++K +E + ++D++ + G +EDA+
Sbjct: 491 RPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAF 550
Query: 187 ILFER--IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
+R E + + W++++ G G + +F+ ++ +KP
Sbjct: 551 SFIKRTGFEPNEAI-WSSLVAGCRSHGNMELAFYAADKLLE--LKP 593
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 187/548 (34%), Positives = 307/548 (56%), Gaps = 11/548 (2%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
+ SLLQ C+ K +Q IHA ++TN ++H + A + D A F +
Sbjct: 35 FNSLLQQCLSIKQLKQ---IHAQLLTN----SIHKPNSFLYKIADLKDFAYASVFFSNIL 87
Query: 93 ERNVVSWTAMISGYAQNGYDEN-ALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
+ S+ MI G + + AL +S M G++ N TY AC+ + ++ GR
Sbjct: 88 DPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGR 147
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
M S+ + E+ V +L+ +YA+CG + DA +F+ I +KD+VSWN+MI G +
Sbjct: 148 MGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMR 207
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
++ LFR MM G +P+ +L S+L A +L + + + +++ + + +
Sbjct: 208 HAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGS 267
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
+LI +Y K G + SA +++ SM K D ++ A+I+G+A++ S+EA LF+DM +
Sbjct: 268 ALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQN-GMSEEAIKLFQDMRMSSTA 326
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
D + L +L+ CA++ +L+LG+Q+ +A + D VG AL+DMYAK G + +A R
Sbjct: 327 PDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRV 386
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG--MVPNDVTFLSLLFACSHTG 449
F M KN +SW ++I+ A HG EA+ L+K M +EG + PND+TF+ +L AC H G
Sbjct: 387 FYGMPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAG 446
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
L EG LF M + + ++P+ EH+SC+VDLF+R G LE A++ + M KP + A+
Sbjct: 447 LVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGAL 506
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
LGAC N + E + L ++EP S NYV+ S +Y WD++ + R LM+++ +
Sbjct: 507 LGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVS 566
Query: 570 KNPGYSFL 577
K PG S++
Sbjct: 567 KTPGCSWI 574
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 198/362 (54%), Gaps = 8/362 (2%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
TY L C + A + H +I G + + H+S +I YA+ G + ARK FD +
Sbjct: 129 TYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEI 188
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
++++VSW +MISGY++ + A+ +F M+ +G + N+ + S L AC + L+ G
Sbjct: 189 SQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGT 248
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
++ + + + N F+ SAL+ +Y KCG + A +F+ +++KD V+WNAMI G A G
Sbjct: 249 WVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNG 308
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLESSNKL 269
++++ LF+ M PD TL IL AS+G ++L K Q+ + G + +
Sbjct: 309 MSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGK--QVEIYASERGFQDDVYV 366
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK- 328
+L+D+YAK GS+ +A++++ M K + +S A+IS A ++EA LFK M+ +
Sbjct: 367 GTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAF-HGQAQEALALFKSMMNEG 425
Query: 329 -KMGIDDVILCLMLNICANVASLNLGRQI-HAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ +D+ +L+ C + ++ GR++ H + + + ++D+++++G +
Sbjct: 426 GTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLE 485
Query: 387 DA 388
+A
Sbjct: 486 EA 487
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 14/202 (6%)
Query: 12 QLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKV 71
+L Q ++ S + PD + T + +L C A + + G++ ++++ T +
Sbjct: 315 KLFQDMRMSSTAPDQI----TLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTAL 370
Query: 72 IIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG--VRA 129
+ YAK G + +A + F MP++N VSW AMIS A +G + AL +F +M+ G V
Sbjct: 371 VDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSP 430
Query: 130 NQFTYSSALRACARMRWLQGGR----MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
N T+ L AC + GR M+ S V + S ++DL+++ G +E+A
Sbjct: 431 NDITFVGVLSACVHAGLVDEGRRLFHMMSSSFG---LVPKIEHYSCMVDLFSRAGHLEEA 487
Query: 186 W-ILFERIERKDVVSWNAMIGG 206
W + E+ D V A++G
Sbjct: 488 WDFVMTMPEKPDEVILGALLGA 509
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 180/564 (31%), Positives = 304/564 (53%), Gaps = 37/564 (6%)
Query: 51 LIHAHIITNGYESNLHLSTKVI---IFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYA 107
+IHA +I G + + +K+I + + A F+ + E N++ W M G+A
Sbjct: 5 MIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHA 64
Query: 108 QNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLF 167
+ +AL ++ M+ G+ N +T+ L++CA+ + + G+ I G + K + +L+
Sbjct: 65 LSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLY 124
Query: 168 VKSALLDLYAKCGWIEDA--------------------------WI-----LFERIERKD 196
V ++L+ +Y + G +EDA +I +F+ I KD
Sbjct: 125 VHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKD 184
Query: 197 VVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHD 256
VVSWNAMI G A G N ++ LF+ MM+ ++PD T+ S++ A + Q+H
Sbjct: 185 VVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHS 244
Query: 257 LIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSK 316
I G S+ K+ +LID+Y K G + +A L+ + D+IS LI G+ N K
Sbjct: 245 WIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHM-NLYK 303
Query: 317 EAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN--A 374
EA LF++M+ +DV + +L CA++ ++ +GR IH + K A + +
Sbjct: 304 EALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTS 363
Query: 375 LIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
LIDMYAK G+I A + FD + ++++ SW ++I G+A HG + A +++ +M+ + P+
Sbjct: 364 LIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPD 423
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI 494
D+TF+ LL ACSH+G+ G +F M Y+I P+ EH+ C++DL G + A MI
Sbjct: 424 DITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMI 483
Query: 495 RQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWD 554
M ++P +W ++L AC ++GN LGE A+NL +EP+ +YV+LSNIY AG W+
Sbjct: 484 NTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWN 543
Query: 555 NARKTRKLMEERSLRKNPGYSFLQ 578
K R L+ ++ ++K PG S ++
Sbjct: 544 EVAKIRALLNDKGMKKVPGCSSIE 567
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 146/452 (32%), Positives = 228/452 (50%), Gaps = 43/452 (9%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ LL+ C KA R+ IH H++ GY+ +L++ T +I Y + G + ARK FD+
Sbjct: 90 TFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQS 149
Query: 92 PERNVVSWTAMISGYAQNGY-------------------------------DENALLVFS 120
R+VVS+TA+I+GYA GY ++ AL +F
Sbjct: 150 SHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFK 209
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M+++ VR ++ T S + ACA+ ++ GR + I F NL + +AL+DLY KCG
Sbjct: 210 EMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCG 269
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+E A LFE + KDV+SWN +IGG ++ LF+ M+R G P+ T+ SIL
Sbjct: 270 EVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILP 329
Query: 241 --ASVGGIELMKISQIHDLIIKL--GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT 296
A +G IE+ + IH I K G+ +++ SLID+YAK G I +A Q++ S+L
Sbjct: 330 ACAHLGAIEIGR--WIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNR 387
Query: 297 DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI 356
+ S A+I GFA + AFD+F M ++ DD+ +L+ C++ L+LGR I
Sbjct: 388 SLSSWNAMIFGFAM-HGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHI 446
Query: 357 -HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHG 414
+ Y+ + +ID+ SG +A + M + + + W SL+ HG
Sbjct: 447 FRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHG 506
Query: 415 YGHEAIELYKK--MKHEGMVPNDVTFLSLLFA 444
E E Y + +K E P LS ++A
Sbjct: 507 -NVELGESYAQNLIKIEPKNPGSYVLLSNIYA 537
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 184/408 (45%), Gaps = 48/408 (11%)
Query: 9 KTGQLKQALKFSLSCPDTLLDP--STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+TG K+AL+ T + P ST +S++ C + +H+ I +G+ SNL
Sbjct: 197 ETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLK 256
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ +I Y K G+V +A F+ + ++V+SW +I GY + ALL+F MLRSG
Sbjct: 257 IVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG 316
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKG-RFVENLFV-KSALLDLYAKCGWIED 184
N T S L ACA + ++ GR I I K + V N +++L+D+YAKCG IE
Sbjct: 317 ESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEA 376
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG 244
A +F+ I + + SWNAMI G AM G + +F +F M + ++PD T +L A
Sbjct: 377 AQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACS- 435
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
H ++ LG RS + Y+ K + C
Sbjct: 436 ----------HSGMLDLGRH-----------------IFRSMKEDYKITPKLEHYGCMID 468
Query: 305 ISGFARDDNHS---KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF 361
+ G HS KEA ++ M +M D VI C +L C ++ LG
Sbjct: 469 LLG------HSGLFKEAEEMINTM---EMEPDGVIWCSLLKACKMHGNVELGESYAQNLI 519
Query: 362 KYQSSYDAAVGNALIDMYAKSG---EIADANRAFDEMGDKNVISWTSL 406
K + + L ++YA +G E+A ++ G K V +S+
Sbjct: 520 KIEPKNPGSY-VLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSI 566
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 174/489 (35%), Positives = 278/489 (56%), Gaps = 4/489 (0%)
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLR-SGVRANQFTYSSALRACARMRWLQGG 150
P R+ S+ +I + + G+ E+AL +F ML + V +Q T ++ +++C+RM L G
Sbjct: 131 PPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVG 190
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
R +Q K F+ + FV ++L+ +YA CG + A +LF ++ K V++WNAMI G
Sbjct: 191 RGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKN 250
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKL 269
G + +F+ M+ D TL S+ A G + + Q I + + G+ S L
Sbjct: 251 GDWKEVVEMFKGMLEVRAPFDEVTLLSVATA-CGRLGDANLGQWIAEYAEEKGMLRSRNL 309
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+L+D+YAK G + A +L+ M D+++ +A+ISG+ + D +EA +F +M +
Sbjct: 310 ATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDR-CREALAIFNEMQGTE 368
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ +DV + +L+ CA + +L G+ +H++ + +G AL+D YAK G I DA
Sbjct: 369 VNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAV 428
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
+AF+ M +N +WT+LI G A +G EA+EL+ M + P DVTF+ +L ACSH
Sbjct: 429 KAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGC 488
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
L EG FT M Y I PR EH+ C+VDL R G ++ AY IR M I+P A +W A+
Sbjct: 489 LVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRAL 548
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
L AC+++ N +GE A + + ++P S NY++LSN Y + G W NA RK M+E+ +
Sbjct: 549 LSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVE 608
Query: 570 KNPGYSFLQ 578
K PG S ++
Sbjct: 609 KIPGCSLIE 617
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 203/429 (47%), Gaps = 13/429 (3%)
Query: 3 IVRANFKTGQLKQALK-FSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITN 59
++R+ + G + AL F DT + P T + ++ C + A+
Sbjct: 141 LIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRGVQAYAFKR 200
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G+ + + +I YA GDV++A F + + V++W AMI+GY +NG + + +F
Sbjct: 201 GFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMF 260
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
ML ++ T S AC R+ G+ I ++ + + + +AL+D+YAKC
Sbjct: 261 KGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKC 320
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G ++ A LF+R+ +DVV+W+AMI G ++ +F M + P+ T+ S+L
Sbjct: 321 GELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVL 380
Query: 240 RAS--VGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
A +G +E K +H I + L + L +L+D YAK G I+ A + + SM +
Sbjct: 381 SACAVLGALETGK--WVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRN 438
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQ-I 356
+ TALI G A + S+EA +LF M+ + DV +L C++ + GR+
Sbjct: 439 TWTWTALIKGMA-SNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHF 497
Query: 357 HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHG- 414
+ Y ++D+ ++G I +A + M + N + W +L++ H
Sbjct: 498 TSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVHKN 557
Query: 415 --YGHEAIE 421
G EA++
Sbjct: 558 VEIGEEALK 566
>gi|356567222|ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Glycine max]
Length = 887
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 181/537 (33%), Positives = 298/537 (55%), Gaps = 4/537 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H + + G S++ ++T ++ YAK G++ A++ F + R++V W+A +S Q GY
Sbjct: 350 VHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQAGY 409
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
AL +F M G++ ++ SS + ACA + + G+M+ + K ++ V +
Sbjct: 410 PGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATT 469
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+ +Y +C A LF R+ KDVV+WN +I G G + +F + G++PD
Sbjct: 470 LVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPD 529
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
T+ S+L A +L H IIK G+ES + +LID+YAK GS+ +A L+
Sbjct: 530 SGTMVSLLSACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLFH 589
Query: 292 -SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
+ D +S +I+G+ + + EA F M L+ + + V +L + ++ L
Sbjct: 590 LNKHVKDEVSWNVMIAGYLHNGC-ANEAISTFNQMKLESVRPNLVTFVTILPAVSYLSIL 648
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
HA + +GN+LIDMYAKSG+++ + + F EM +K ISW ++++GY
Sbjct: 649 REAMAFHACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMENKGTISWNAMLSGY 708
Query: 411 AKHGYGHEAIELYKKMKHEGMVPND-VTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
A HG G A+ L+ M+ E VP D V+++S+L AC H GL EG +F M K+ + P
Sbjct: 709 AMHGQGEVALALFSLMQ-ETHVPVDSVSYISVLSACRHAGLIQEGRNIFQSMTEKHNLEP 767
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
EH++C+VDL G + +I +M +P A +W A+LGAC ++ N LGE+A +L
Sbjct: 768 SMEHYACMVDLLGCAGLFDEVLCLIDKMPTEPDAQVWGALLGACKMHSNVKLGEIALHHL 827
Query: 530 FDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKNILL 586
+EP +V+Y+VLS+IY G W +AR+TR M + L+KNPGYS++ + K+ + L
Sbjct: 828 LKLEPRNAVHYIVLSDIYAQCGRWIDARRTRSNMTDHGLKKNPGYSWVGAHKQGLSL 884
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 140/507 (27%), Positives = 250/507 (49%), Gaps = 15/507 (2%)
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+S +I Y+K G+V A + FD+M ++ +SW M++GY +G L + M R
Sbjct: 264 VSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKH 323
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
++ N+ + +++ A R L+ G+ + + ++ V + ++ +YAKCG ++ A
Sbjct: 324 IKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAK 383
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVG 244
F +E +D+V W+A + L G+ ++ +F+ M +G+KPD L S++ A +
Sbjct: 384 EFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEIS 443
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
L K+ +H +IK + S + +L+ +Y + S A L+ M D+++ L
Sbjct: 444 SSRLGKM--MHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTL 501
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
I+GF + + + A ++F + L + D + +L+ CA + L LG H K
Sbjct: 502 INGFTKCGD-PRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNG 560
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFD-EMGDKNVISWTSLIAGYAKHGYGHEAIELY 423
+ V ALIDMYAK G + A F K+ +SW +IAGY +G +EAI +
Sbjct: 561 IESEMHVKVALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTF 620
Query: 424 KKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFAR 483
+MK E + PN VTF+++L A S+ + E F I + + + ++D++A+
Sbjct: 621 NQMKLESVRPNLVTFVTILPAVSYLSILREAMA-FHACIIRMGFISSTLIGNSLIDMYAK 679
Query: 484 RGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDME----PEKSVN 539
GQL + +M K T S W+A+L +++G GE+A M+ P SV+
Sbjct: 680 SGQLSYSEKCFHEMENKGTIS-WNAMLSGYAMHGQ---GEVALALFSLMQETHVPVDSVS 735
Query: 540 YVVLSNIYTAAGAWDNARKTRKLMEER 566
Y+ + + AG R + M E+
Sbjct: 736 YISVLSACRHAGLIQEGRNIFQSMTEK 762
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 132/502 (26%), Positives = 256/502 (50%), Gaps = 17/502 (3%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITN 59
+++RA + ++A+K + L+P T+ +L+ C + IH I +
Sbjct: 97 SLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFHEGVAIHQDIASR 156
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
E ++ + T ++ Y K+G + +ARK FD+MP ++V SW AMISG +Q+ AL +F
Sbjct: 157 ELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSNPCEALEIF 216
Query: 120 SAM-LRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
M + GV + + + A +R+ + + I G + + R V + V ++L+D+Y+K
Sbjct: 217 QRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVR-RCVFGV-VSNSLIDMYSK 274
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
CG ++ A +F+++ KD +SW M+ G G + L M R+ +K + ++ +
Sbjct: 275 CGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNKISVVNS 334
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
+ A+ +L K ++H+ ++LG+ S + ++ +YAK G ++ A + + S+ D+
Sbjct: 335 VLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEGRDL 394
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
+ +A +S + + EA +F++M + + D IL +++ CA ++S LG+ +H
Sbjct: 395 VVWSAFLSALVQ-AGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHC 453
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHE 418
+ K D +V L+ MY + A F+ M K+V++W +LI G+ K G
Sbjct: 454 YVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRL 513
Query: 419 AIELYKKMKHEGMVPNDVTFLSLLFACS-----HTGLTCEGWELFTDMINKYRILPRAEH 473
A+E++ +++ G+ P+ T +SLL AC+ + G+ F I K I
Sbjct: 514 ALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGIC------FHGNIIKNGIESEMHV 567
Query: 474 FSCVVDLFARRGQLESAYNMIR 495
++D++A+ G L +A N+
Sbjct: 568 KVALIDMYAKCGSLCTAENLFH 589
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 188/361 (52%), Gaps = 4/361 (1%)
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
A + + +++ W ++I Y++ + A+ + M G+ +++T++ L+AC
Sbjct: 83 APNSITNPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALD 142
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
G I I ++F+ + L+D+Y K G +++A +F+++ KDV SWNAMI G
Sbjct: 143 FHEGVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISG 202
Query: 207 LAMQGFNDDSFWLFRSM-MRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
L+ ++ +F+ M M +G++PD ++ ++ A ++ IH +++ +
Sbjct: 203 LSQSSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRCV-- 260
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
++ SLID+Y+K G ++ A+Q++ M D IS +++G+ + E L +M
Sbjct: 261 FGVVSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYF-EVLQLLDEM 319
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
K + ++ + + + L G+++H +A + + D V ++ MYAK GE+
Sbjct: 320 KRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGEL 379
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A F + ++++ W++ ++ + GY EA+ ++++M+HEG+ P+ SL+ AC
Sbjct: 380 KKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSAC 439
Query: 446 S 446
+
Sbjct: 440 A 440
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 176/368 (47%), Gaps = 8/368 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D + SL+ C + + R ++H ++I S++ ++T ++ Y + + A F
Sbjct: 428 DKTILSSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLF 487
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+RM ++VV+W +I+G+ + G AL +F + SGV+ + T S L ACA + L
Sbjct: 488 NRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLY 547
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER-KDVVSWNAMIGGL 207
G G+I K + VK AL+D+YAKCG + A LF + KD VSWN MI G
Sbjct: 548 LGICFHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAGY 607
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
G +++ F M + ++P+ T +IL A L + H II++G SS
Sbjct: 608 LHNGCANEAISTFNQMKLESVRPNLVTFVTILPAVSYLSILREAMAFHACIIRMGFISST 667
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ SLID+YAK G + + + + M IS A++SG+A + A LF M
Sbjct: 668 LIGNSLIDMYAKSGQLSYSEKCFHEMENKGTISWNAMLSGYAM-HGQGEVALALFSLMQE 726
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ +D V +L+ C + + GR I +QS + ++ YA ++
Sbjct: 727 THVPVDSVSYISVLSACRHAGLIQEGRNI------FQSMTEKHNLEPSMEHYACMVDLLG 780
Query: 388 ANRAFDEM 395
FDE+
Sbjct: 781 CAGLFDEV 788
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 193/398 (48%), Gaps = 27/398 (6%)
Query: 170 SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
+ LL ++A+ ++ + I ++ WN++I + ++ +++M G++
Sbjct: 66 NPLLQIHARL-IVQQCTLAPNSITNPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLE 124
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
PD +T +L+A G ++ + IH I LE + L+D+Y K G + +A ++
Sbjct: 125 PDKYTFTFVLKACTGALDFHEGVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKV 184
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ M D+ S A+ISG ++ N EA ++F+ M +++ D + +LN+ V+
Sbjct: 185 FDKMPGKDVASWNAMISGLSQSSN-PCEALEIFQRMQMEEGVEPDSV--SILNLAPAVSR 241
Query: 350 L---NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
L + + IH + + V N+LIDMY+K GE+ A++ FD+M K+ ISW ++
Sbjct: 242 LEDVDSCKSIHGYVVR--RCVFGVVSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATM 299
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT-----GLTCEGWELFTDM 461
+AGY HG E ++L +MK + + N ++ ++ + A + T G + L M
Sbjct: 300 MAGYVHHGCYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGM 359
Query: 462 INKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGAC--SIYGNT 519
+ + + +V ++A+ G+L+ A + + +WSA L A + Y
Sbjct: 360 TSDIVVA------TPIVSMYAKCGELKKAKEFFLSLEGRDLV-VWSAFLSALVQAGYPGE 412
Query: 520 SLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNAR 557
+L ++P+K+ +LS++ +A ++R
Sbjct: 413 ALSIFQEMQHEGLKPDKT----ILSSLVSACAEISSSR 446
>gi|9279602|dbj|BAB01060.1| unnamed protein product [Arabidopsis thaliana]
Length = 598
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 178/531 (33%), Positives = 296/531 (55%), Gaps = 4/531 (0%)
Query: 51 LIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
L H + I G S++++S +++ Y K G + A FD MP+R+ VSW MISGY G
Sbjct: 21 LTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCG 80
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
E+A +F+ M RSG + +++S L+ A ++ G + G + KG + N++V S
Sbjct: 81 KLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGS 140
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM-MRQGMK 229
+L+D+YAKC +EDA+ F+ I + VSWNA+I G +FWL M M+ +
Sbjct: 141 SLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVT 200
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
D T +L + + Q+H ++KLGL+ + ++I YA GS+ A ++
Sbjct: 201 MDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRV 260
Query: 290 YRSMLKT-DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
+ + + D+IS ++I+GFA+ S++A F + ++ +DD +L C+++A
Sbjct: 261 FDGLGGSKDLISWNSMIAGFAQK-GLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLA 319
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN-VISWTSLI 407
+L LG+QIHA A K + V ++LI MY+K G I A + F ++ K+ ++W ++I
Sbjct: 320 TLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMI 379
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRI 467
GYA+HG G +++L+ +M ++ + + VTF ++L ACSHTGL EG EL M Y+I
Sbjct: 380 LGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKI 439
Query: 468 LPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAAR 527
PR EH++ VDL R G + A +I M + P + LG C G + A
Sbjct: 440 QPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVAN 499
Query: 528 NLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+L ++EPE YV LS++Y+ W+ +K+M+ER ++K PG+S+++
Sbjct: 500 HLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIE 550
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 94/194 (48%), Gaps = 2/194 (1%)
Query: 250 KISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFA 309
K+S H IK G S ++ ++D Y K+G + A L+ M K D +S +ISG+
Sbjct: 18 KLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYT 77
Query: 310 RDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDA 369
++A+ LF M +D +L A+V +LG Q+H K +
Sbjct: 78 -SCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNV 136
Query: 370 AVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE 429
VG++L+DMYAK + DA AF E+ + N +SW +LIAG+ + A L M+ +
Sbjct: 137 YVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMK 196
Query: 430 GMVPNDV-TFLSLL 442
V D TF LL
Sbjct: 197 AAVTMDAGTFAPLL 210
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 181/557 (32%), Positives = 305/557 (54%), Gaps = 16/557 (2%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS 83
P LL+ ++SLLQ C K +Q H I A II NG++ N +++ K++ A + +
Sbjct: 33 PHRLLE-ERFISLLQSC---KTSKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTY 88
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
AR+ FD++P+ N+ W +M GYAQ+ + +F M +R N FT+ L++C +
Sbjct: 89 ARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGK 148
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
+ L G + + K F N FV + L+D+Y+ G + DA+ +F + ++VV+W +M
Sbjct: 149 INALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSM 208
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQI-HDLIIKLG 262
I G + R + + D ++ + G ++++ ++ H++ +
Sbjct: 209 INGYILSA----DLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNRDV 264
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
+ + L G YA G++ + L+ M + +I S ALI G+A + E F
Sbjct: 265 MFWNTVLKG-----YATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFF-EVLGSF 318
Query: 323 KDMILKK-MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
K M+ + + +D L +L+ CA + +L+LG+ +H +A + VGNAL+DMYAK
Sbjct: 319 KRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAK 378
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
G I +A F M K++ISW +LI G A H G +A+ L+ +MK+ G P+ +TF+ +
Sbjct: 379 CGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGI 438
Query: 442 LFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
L AC+H GL +G+ F M + Y I+P+ EH+ C+VD+ AR G+LE A +R+M ++
Sbjct: 439 LCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEA 498
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRK 561
+W+ +LGAC IY N L ELA + L ++EP+ NYV+LSNIY AG W++ + +
Sbjct: 499 DGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKV 558
Query: 562 LMEERSLRKNPGYSFLQ 578
M + +K PG S ++
Sbjct: 559 AMRDTGFKKLPGCSLIE 575
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 87/192 (45%), Gaps = 2/192 (1%)
Query: 16 ALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFY 75
+ K LS D + +T +++L C A +H + ++G + N+++ ++ Y
Sbjct: 317 SFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMY 376
Query: 76 AKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYS 135
AK G + +A F M ++++SW +I G A + +AL +F M +G + + T+
Sbjct: 377 AKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFI 436
Query: 136 SALRACARMRWLQGG-RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE- 193
L AC M ++ G Q + + ++D+ A+ G +E A ++
Sbjct: 437 GILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPV 496
Query: 194 RKDVVSWNAMIG 205
D V W ++G
Sbjct: 497 EADGVIWAGLLG 508
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 169/528 (32%), Positives = 292/528 (55%), Gaps = 2/528 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IH H+I GYE NL + ++ Y K + A + F M ++ V++ ++++GY+ G
Sbjct: 162 IHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGL 221
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+E A+ +F + SG++ + FT+++ L A + + G+ + G + K FV N+FV +A
Sbjct: 222 NEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNA 281
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
LLD Y+K +++ LF + D +S+N +I A G +SF LFR +
Sbjct: 282 LLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRR 341
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
F ++L + + L QIH I +G +++ +L+D+YAK + A +++
Sbjct: 342 QFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFD 401
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
++ + TA+IS + + H +E ++F DM + D +L CAN+AS++
Sbjct: 402 NIACKSTVPWTAMISAYVQKGKH-EEGINVFSDMRRTGVPADQATFASILRACANLASIS 460
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
LGRQ+H+ + + G+AL+D YAK G + DA ++F EM ++N +SW +LI+ YA
Sbjct: 461 LGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYA 520
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
++G + +++M G P+ V+FLS+L ACSH G E F M Y + P+
Sbjct: 521 QNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKR 580
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
EH++ +VD+ R G+ + A ++ +M +P+ +WS++L +C I+ N L + AA LF+
Sbjct: 581 EHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFN 640
Query: 532 MEP-EKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
ME + Y+ +SNIY AG WDN K +K M +R +RK P YS+++
Sbjct: 641 MEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVE 688
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 152/577 (26%), Positives = 276/577 (47%), Gaps = 45/577 (7%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIF-YAKVGDVLSA 84
T +P+T S F ++ ER L+HAH + + + +S ++I + K G + A
Sbjct: 37 TGFNPNTCRS--NFQVNNFLER-GDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKA 93
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
R+ FD M ER VSWT +I GY Q+ + A +++ M R G+ + T + L +
Sbjct: 94 RELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGEL 153
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
I + K + NL V ++L+D Y K + A LF+ + KD V++N+++
Sbjct: 154 ETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLM 213
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G + +G N+++ LF + G+KP FT ++L A+VG + Q+H ++K
Sbjct: 214 TGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFV 273
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ + +L+D Y+K+ + +L+ M + D IS +I+ +A + KE+FDLF+
Sbjct: 274 WNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAW-NGQFKESFDLFRK 332
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
+ + +L+I + +L +GRQIH A +++++ V NAL+DMYAK
Sbjct: 333 LQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNG 392
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+A + FD + K+ + WT++I+ Y + G E I ++ M+ G+ + TF S+L A
Sbjct: 393 DKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRA 452
Query: 445 CSHTGLTCEGWEL----------------------------FTDMINKYRILPRAEHFS- 475
C++ G +L TD I + +P S
Sbjct: 453 CANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSW 512
Query: 476 -CVVDLFARRGQLESAYNMIRQM---NIKPTASLWSAILGACSIYG--NTSLGEL-AARN 528
++ +A+ G ++ N +QM KP + + ++L ACS G +L +
Sbjct: 513 NALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQ 572
Query: 529 LFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
++++ P++ +Y + ++ G +D A KLM E
Sbjct: 573 IYEVTPKRE-HYTSMVDVLCRNGRFDEA---EKLMTE 605
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 94/254 (37%), Gaps = 74/254 (29%)
Query: 339 LMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK 398
++ N A SLN I A K + + N ++ + + G++ A++ FD+M K
Sbjct: 13 VLRNSPAPKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAK 72
Query: 399 NVI-------------------------------SWTSLIAGYAKHGYGHEAIELYKKMK 427
N I SWT LI GY + EA LY M+
Sbjct: 73 NTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMR 132
Query: 428 HEGMVPNDVTFLSLLFACS-----------HTGLTCEGWE-------------------- 456
G+ P+ VT ++LL HT + G+E
Sbjct: 133 RGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLY 192
Query: 457 ----LFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMN---IKPTASLWSAI 509
LF M+NK + F+ ++ ++ G E A + +++ IKP+ ++A+
Sbjct: 193 LASQLFKHMLNKDTVT-----FNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAAL 247
Query: 510 LGACSIYGNTSLGE 523
L A +T G+
Sbjct: 248 LSAAVGLDDTKFGQ 261
>gi|357143056|ref|XP_003572787.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Brachypodium distachyon]
Length = 594
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 188/562 (33%), Positives = 301/562 (53%), Gaps = 8/562 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
D T+ + C + R +H + G+ + ++ +I Y GDV +A
Sbjct: 36 FDHLTFPFAAKACGGLRLSRHGRAVHCRALAAGFGDDTYVQNALISMYMGCGDVAAAEAV 95
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F M R VVSW A+I+G +N E AL VF M G ++ T S L ACA+ + L
Sbjct: 96 FCAMQNRTVVSWNAVIAGCVKNDCAERALEVFGEMAGDGTEIDRATVVSVLPACAQAKNL 155
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGG 206
GR + +++ + VK+AL+D+Y KC +E A +F+ + KDVVSW MIG
Sbjct: 156 SIGRAVHQLVEERGLADYAAVKNALIDMYGKCRNLEGARKVFDDHKYDKDVVSWTVMIGA 215
Query: 207 LAMQGFNDDSFWLFRSM-MRQGMK-PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
+ +++F L M M G P+ T+ +L A + +H + I+LGLE
Sbjct: 216 YVLNDHVEEAFALGHEMLMTSGAPWPNGVTMAYLLSA-CSRLSGRHAKCMHAMCIRLGLE 274
Query: 265 SSNKLTGSLIDVYAKYGSIRS-AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
S + +L+D YAK +++ L +T+ + T ISG+ ++ K+A +L K
Sbjct: 275 SDIIVETALMDAYAKCHNMKMMELTLENGSRRTETWNAT--ISGYTHNEQ-EKKAIELLK 331
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
MI + D + +L A A + IH + + LI++YAK+G
Sbjct: 332 RMIAESARPDSATMASILPAYAESADVRQATNIHCYLLTLGFLRSTEITTGLINVYAKAG 391
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
++ + FD + +K+V++WT++IAGY HG +I LY +M G+ PN VTF SLL+
Sbjct: 392 DLDVSWSLFDGLPEKDVVAWTTVIAGYGMHGQAQTSILLYNRMVQLGVKPNTVTFASLLY 451
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
ACSH G+ EG +LF DM + ++P A+H+S +VD+ R G++E AY +I M ++P+
Sbjct: 452 ACSHVGMVDEGLQLFEDMRGIHGVMPNADHYSSLVDMVGRAGRIEEAYRLIEDMPLEPST 511
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
S+W A+LGAC ++ N GE+AA++LF++EP+ + N+V+L NIY AA W + + R+ M
Sbjct: 512 SVWGALLGACVLHKNVKFGEVAAKHLFELEPKNTGNHVLLGNIYAAADRWSDVQDVRRRM 571
Query: 564 EERSLRKNPGYSFLQSSKKNIL 585
E+ L K G S ++S + L
Sbjct: 572 AEKGLSKESGSSLVESRSVHAL 593
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 186/397 (46%), Gaps = 16/397 (4%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
T +D +T +S+L C K +H + G + +I Y K ++ AR
Sbjct: 135 TEIDRATVVSVLPACAQAKNLSIGRAVHQLVEERGLADYAAVKNALIDMYGKCRNLEGAR 194
Query: 86 KAFDRMP-ERNVVSWTAMISGYAQNGYDENALLVFSAML-RSGVR-ANQFTYSSALRACA 142
K FD +++VVSWT MI Y N + E A + ML SG N T + L AC+
Sbjct: 195 KVFDDHKYDKDVVSWTVMIGAYVLNDHVEEAFALGHEMLMTSGAPWPNGVTMAYLLSACS 254
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
R+ M I+ G ++ V++AL+D YAKC ++ + E R+ +WNA
Sbjct: 255 RLSGRHAKCMHAMCIRLG-LESDIIVETALMDAYAKCHNMKMMELTLENGSRR-TETWNA 312
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
I G + L + M+ + +PD T+ SIL A ++ + + IH ++ LG
Sbjct: 313 TISGYTHNEQEKKAIELLKRMIAESARPDSATMASILPAYAESADVRQATNIHCYLLTLG 372
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
S ++T LI+VYAK G + ++ L+ + + D+++ T +I+G+ ++ + L+
Sbjct: 373 FLRSTEITTGLINVYAKAGDLDVSWSLFDGLPEKDVVAWTTVIAGYGM-HGQAQTSILLY 431
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNA-----LID 377
M+ + + V +L C++V ++ G Q+ F+ + NA L+D
Sbjct: 432 NRMVQLGVKPNTVTFASLLYACSHVGMVDEGLQL----FEDMRGIHGVMPNADHYSSLVD 487
Query: 378 MYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKH 413
M ++G I +A R ++M + + W +L+ H
Sbjct: 488 MVGRAGRIEEAYRLIEDMPLEPSTSVWGALLGACVLH 524
>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
Length = 696
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 168/545 (30%), Positives = 311/545 (57%), Gaps = 6/545 (1%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
SL+ C +A + +H H+I G+ +++ L T ++ YAK G + A++ F+ M +
Sbjct: 15 SLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIK 74
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
++ +W+++IS YA+ G E A++++ M+ GV N T++ AL CA + L GR I
Sbjct: 75 DLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIH 134
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND 214
I + ++ ++ +LL++Y KC + +A +FE ++ ++V S+ AMI G +
Sbjct: 135 QRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHA 194
Query: 215 DSFWLFRSMMR-QGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSL 273
++ LF M + + ++P+ +T +IL A G L K ++H + G +++ + +L
Sbjct: 195 EALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNAL 254
Query: 274 IDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGID 333
+ +Y K GS A +++ SM ++IS T++I+ +A+ N +EA +LFK M ++ G+
Sbjct: 255 VTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGN-PQEALNLFKRMDVEPSGVS 313
Query: 334 DVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFD 393
LN CA + +L+ GR+IH + + + +L+ MYA+ G + DA R F+
Sbjct: 314 ---FSSALNACALLGALDEGREIHHRVVEAHLA-SPQMETSLLSMYARCGSLDDARRVFN 369
Query: 394 EMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCE 453
M ++ S ++IA + +HG +A+ +Y++M+ EG+ + +TF+S+L ACSHT L +
Sbjct: 370 RMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHTSLVAD 429
Query: 454 GWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGAC 513
+ F ++ + ++P EH+ C+VD+ R G+L A ++ M + A W +L C
Sbjct: 430 CRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLLSGC 489
Query: 514 SIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPG 573
+G+ + GE AAR +F++ P +++ YV LSN+Y AA +D+AR+ RK MEER +
Sbjct: 490 KRHGDLNRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVRKEMEERGVTTPVA 549
Query: 574 YSFLQ 578
S+++
Sbjct: 550 VSYIE 554
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/399 (30%), Positives = 214/399 (53%), Gaps = 12/399 (3%)
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
M G+ A++F +S + AC +++ L+ GR + + F ++ +++ALL +YAKCG
Sbjct: 1 MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR- 240
++DA +FE +E KD+ +W+++I A G + + L+R M+ +G++P+ T L
Sbjct: 61 LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGG 120
Query: 241 -ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
ASV G L IH I+ + + L SL+++Y K + A +++ M ++
Sbjct: 121 CASVAG--LADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVR 178
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMI-LKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
S TA+IS + + H+ EA +LF M ++ + + +L + +L GR++H
Sbjct: 179 SYTAMISAYVQAGEHA-EALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHR 237
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHE 418
+ V NAL+ MY K G +A + FD M +NVISWTS+IA YA+HG E
Sbjct: 238 HLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQE 297
Query: 419 AIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVV 478
A+ L+K+M E P+ V+F S L AC+ G EG E+ ++ + P+ E + ++
Sbjct: 298 ALNLFKRMDVE---PSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQME--TSLL 352
Query: 479 DLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
++AR G L+ A + +M + S +A++ A + +G
Sbjct: 353 SMYARCGSLDDARRVFNRMKTRDAFS-CNAMIAAFTQHG 390
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 189/392 (48%), Gaps = 20/392 (5%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ L C IH I+ + + L ++ Y K +++ ARK F+ M
Sbjct: 113 TFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGM 172
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLR-SGVRANQFTYSSALRACARMRWLQGG 150
RNV S+TAMIS Y Q G AL +FS M + + N +T+++ L A + L+ G
Sbjct: 173 KARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKG 232
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
R + + F N+ V++AL+ +Y KCG +A +F+ + ++V+SW +MI A
Sbjct: 233 RKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQH 292
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
G ++ LF+ M ++P + S L A L + +IH +++ L +S ++
Sbjct: 293 GNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHL-ASPQME 348
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
SL+ +YA+ GS+ A +++ M D SC A+I+ F + K+A +++ M + +
Sbjct: 349 TSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQ-HGRKKQALRIYRRMEQEGI 407
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS-SYDAAVGN------ALIDMYAKSG 383
D + +L C++ + + R +QS D V ++D+ +SG
Sbjct: 408 PADGITFVSVLVACSHTSLVADCRDF------FQSLVMDHGVVPLVEHYLCMVDVLGRSG 461
Query: 384 EIADANRAFDEMG-DKNVISWTSLIAGYAKHG 414
+ DA + M + ++W +L++G +HG
Sbjct: 462 RLGDAEELVETMPYQTDAVAWMTLLSGCKRHG 493
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 186/583 (31%), Positives = 313/583 (53%), Gaps = 44/583 (7%)
Query: 34 MSLLQFCIDKKAERQAHLIHAHIITNG-YESNLHLST--KVIIFYAKVGDVLSARKAFDR 90
+SLL C K + +IHA +I G + +N LS + I + A F+
Sbjct: 6 LSLLHNC---KTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFET 62
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+ E N++ W M G+A + +A+ ++ M+ G+ N +T+ L++CA+++ + G
Sbjct: 63 IQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEG 122
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCG------------------------------ 180
+ I G + K + +L+V ++L+ +Y K G
Sbjct: 123 QQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASR 182
Query: 181 -WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
+IE A +F+ I KDVVSWNA+I G A G N ++ LF+ MM+ +KPD T+ +++
Sbjct: 183 GYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVV 242
Query: 240 RASV--GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
A G I+L + Q+H I GL S+ K+ +LID+Y+K G + +A L++ + D
Sbjct: 243 SACAQSGSIQLGR--QVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKD 300
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
+IS +I G+ N KEA LF++M+ +DV + +L CA + +++ GR IH
Sbjct: 301 VISWNTMIGGYTHL-NLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIH 359
Query: 358 AFAFKYQSSYDAA--VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGY 415
+ K A + +LIDMYAK G+I A++ F+ M + + + ++I G+A HG
Sbjct: 360 VYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGR 419
Query: 416 GHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFS 475
+ A +++ +M+ G+ P+D+TF+ LL ACSH+G+ G +F M Y+I P+ EH+
Sbjct: 420 ANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYG 479
Query: 476 CVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPE 535
C++DL G + A MI M ++P +W ++L AC ++GN LGE A+ L +EPE
Sbjct: 480 CMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPE 539
Query: 536 KSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+YV+LSNIY AG W+ R L+ ++ ++K PG S ++
Sbjct: 540 NPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIE 582
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 141/455 (30%), Positives = 225/455 (49%), Gaps = 39/455 (8%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L + T+ LL+ C K ++ IH H++ GYE +L++ T +I Y K G A K
Sbjct: 100 LPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHK 159
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDEN-------------------------------A 115
FD R+VVS+TA+I+GYA GY E+ A
Sbjct: 160 VFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEA 219
Query: 116 LLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDL 175
L +F M+++ V+ ++ T + + ACA+ +Q GR + I NL + +AL+DL
Sbjct: 220 LDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDL 279
Query: 176 YAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTL 235
Y+KCG +E A LF+ + KDV+SWN MIGG ++ LF+ M+R G P+ T+
Sbjct: 280 YSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTM 339
Query: 236 GSILR--ASVGGIELMKISQIH-DLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRS 292
SIL A +G I+ + ++ D IK G+ +++ L SLID+YAK G I +A+Q++ S
Sbjct: 340 LSILPACAQLGAIDFGRWIHVYIDKRIK-GVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 398
Query: 293 MLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNL 352
M + +C A+I GFA + AFD+F M + DD+ +L+ C++ L+L
Sbjct: 399 MHHRTLSACNAMIFGFAM-HGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDL 457
Query: 353 GRQI-HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGY 410
GR+I + Y+ + +ID+ G +A + M + + + W SL+
Sbjct: 458 GRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKAC 517
Query: 411 AKHGYGHEAIELYKKM-KHEGMVPNDVTFLSLLFA 444
HG +K+ K E P LS ++A
Sbjct: 518 KMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYA 552
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 187/413 (45%), Gaps = 46/413 (11%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDP--STYMSLLQFCIDKKAERQAHLIHAHIITNG 60
I+ TG K+AL T + P ST ++++ C + + +H+ I +G
Sbjct: 206 IISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHG 265
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
SNL + +I Y+K G+V +A F + ++V+SW MI GY + ALL+F
Sbjct: 266 LGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQ 325
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKG-RFVENL-FVKSALLDLYAK 178
MLRSG N T S L ACA++ + GR I I K + V N ++++L+D+YAK
Sbjct: 326 EMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAK 385
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
CG IE A +F + + + + NAMI G AM G + +F +F M + G++PD T +
Sbjct: 386 CGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGL 445
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
L A H ++ LG RS Q Y+ K +
Sbjct: 446 LSACS-----------HSGMLDLGRR-----------------IFRSMTQNYKITPKLEH 477
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
C + G KEA ++ M ++ D VI C +L C ++ LG +
Sbjct: 478 YGCMIDLLGHL---GLFKEAEEMINTMTMEP---DGVIWCSLLKACKMHGNVELGE---S 528
Query: 359 FAFKYQSSYDAAVGNALI--DMYAKSG---EIADANRAFDEMGDKNVISWTSL 406
FA K G+ ++ ++YA +G E+A+ ++ G K V +S+
Sbjct: 529 FAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSI 581
>gi|125579001|gb|EAZ20147.1| hypothetical protein OsJ_35746 [Oryza sativa Japonica Group]
Length = 601
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 189/560 (33%), Positives = 309/560 (55%), Gaps = 7/560 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L+ ++ +S++ C ++ E+ IHA + G + ++L+ ++ Y K GDV ++ +
Sbjct: 39 LNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQV 98
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD M E+N VSW + I + G+ + L +F M V T SS L A +
Sbjct: 99 FDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSF 158
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
GR + G K ++FV ++L+D+YAK G +E A +FE+++ ++VVSWNAMI L
Sbjct: 159 DLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANL 218
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
G ++F L M + G P+ TL ++L A L QIH I+ GL
Sbjct: 219 VQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDL 278
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
++ +LID+Y+K G + A ++ K D +S LI G+++ E+ LFK M
Sbjct: 279 FISNALIDMYSKCGQLSLARNIFERSEKDD-VSYNTLILGYSQSP-WCFESLLLFKQM-- 334
Query: 328 KKMGIDDVILCLM--LNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ +GID + M L+ C N++ G++IH + S + N+L+D+Y K G +
Sbjct: 335 RSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGML 394
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A++ F+++ K+V SW ++I GY HG A EL++ MK +G+ + V+++++L AC
Sbjct: 395 VTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAAC 454
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
SH GL +G + F+ M+ + I P+ H++C+VDL R GQL +IR M + +
Sbjct: 455 SHGGLVDKGKKYFSQMVAQ-NIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDV 513
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
W A+LGAC I+GN L + AA +LF+++PE S Y ++ N+Y G W+ A K RKLM+
Sbjct: 514 WGALLGACRIHGNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGRWNEANKIRKLMKS 573
Query: 566 RSLRKNPGYSFLQSSKKNIL 585
R ++KNP YS++Q N L
Sbjct: 574 RKVQKNPAYSWVQDQDGNKL 593
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 137/463 (29%), Positives = 244/463 (52%), Gaps = 14/463 (3%)
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
MPER+VVSW +++S + NG +A +M+RSG N + S + AC + + G
Sbjct: 1 MPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFG 60
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
I K + + +AL+D+Y K G +E + +F+ + ++ VSWN+ IG
Sbjct: 61 LSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNA 120
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV--GGIELMKISQIHDLIIKLGLESSNK 268
GF D +FR M + P TL S+L A V G +L + ++H IK ++
Sbjct: 121 GFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGR--EVHGYSIKRAMDLDIF 178
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ SL+D+YAK+GS+ A ++ M +++S A+I+ ++ + EAF L DM
Sbjct: 179 VANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAET-EAFRLVTDMQKS 237
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ + L +L CA +ASL +G+QIHA++ + +D + NALIDMY+K G+++ A
Sbjct: 238 GECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLA 297
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
F E +K+ +S+ +LI GY++ + E++ L+K+M+ G+ + V+F+ L AC++
Sbjct: 298 RNIF-ERSEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNL 356
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFS-CVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
+ G E+ ++ R+L S ++DL+ + G L +A + ++ K AS W+
Sbjct: 357 SVFKHGKEIHCVLVR--RLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVAS-WN 413
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAA 550
++ ++G + A LF++ ++Y +S I A
Sbjct: 414 TMILGYGMHGQIDI----AFELFELMKGDGLDYDHVSYIAVLA 452
>gi|449439723|ref|XP_004137635.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 769
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 183/554 (33%), Positives = 294/554 (53%), Gaps = 5/554 (0%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y+S LQ C+ R IHA + +L V+ FY K G + + FD MP
Sbjct: 218 YVSFLQRCVLTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNFYVKCGRLSYGLQLFDEMP 277
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG-VRANQFTYSSALRACARMRWLQGGR 151
ERNVVSW+A+I+G+ Q+G AL +F M G + N+FT SAL AC+ + L
Sbjct: 278 ERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRLICSY 337
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG-LAMQ 210
I I + + N+F+ +A L + + +A +FE KD VSWNAM+ G L +
Sbjct: 338 QIYAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYLQLA 397
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
F FW R M + +KPD FT SIL E Q+H ++K G + +
Sbjct: 398 YFELPKFW--RRMNLESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVG 455
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
SL D+Y K + ++ + M +D+ S T + +G + K A ++ +M +
Sbjct: 456 NSLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAGCLQCGEPMK-ALEVIYEMKNVGV 514
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
++ L LN CAN+AS+ G++ H K + D V NAL+DMYAK G + AN
Sbjct: 515 RLNKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANV 574
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
F M +++V+SWT++I G+A +G EA++++ +M+ PN +TF+ +L ACS G
Sbjct: 575 VFRSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNACSQGGF 634
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
E W+ F+ M + I P +H+ C+V+L R G ++ A ++I QM +P + +W +L
Sbjct: 635 IDEAWKYFSSMSADHGIAPSEDHYVCMVNLLGRAGCIKEAEDLILQMPFQPGSLVWQTLL 694
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
GAC ++G+ G+ AA + +++ Y++LSN++ WD+ R+LME R ++K
Sbjct: 695 GACLVHGDIETGKRAAEHALNLDRNDPSTYILLSNMFAGGDNWDSVGILRELMETRDVKK 754
Query: 571 NPGYSFLQSSKKNI 584
PG S++ + ++ I
Sbjct: 755 VPGSSWMSNMRRTI 768
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 6/188 (3%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L+ T + L C + + + H I G + ++ + ++ YAK G + SA
Sbjct: 516 LNKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANVV 575
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F M ER+VVSWT MI G+A NG + AL +F M + N T+ L AC++ ++
Sbjct: 576 FRSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNACSQGGFI 635
Query: 148 QGGRMIQGSIQKGRFV---ENLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAM 203
S+ + E+ +V +++L + G I++A L ++ + + W +
Sbjct: 636 DEAWKYFSSMSADHGIAPSEDHYV--CMVNLLGRAGCIKEAEDLILQMPFQPGSLVWQTL 693
Query: 204 IGGLAMQG 211
+G + G
Sbjct: 694 LGACLVHG 701
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 177/528 (33%), Positives = 285/528 (53%), Gaps = 34/528 (6%)
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
A F + E N + W M+ GYA + +AL ++ M+ G+ N +T+ L++CA+
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER------------ 191
+ + G+ I G + K + +L+V ++L+ +YA+ G +EDA +F+R
Sbjct: 79 SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138
Query: 192 -------------------IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDC 232
I KDVVSWNAMI G A G ++ LF+ MM+ ++PD
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198
Query: 233 FTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRS 292
T+ ++L A + Q+H I G S+ K+ +LID+Y+K G + +A L+
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEG 258
Query: 293 MLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNL 352
+ D++S LI G+ N KEA LF++M+ +DV + +L CA++ ++++
Sbjct: 259 LSCKDVVSWNTLIGGYTHM-NLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDI 317
Query: 353 GRQIHAFAFKYQSSYDAA--VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
GR IH + K A + +LIDMYAK G+I A++ F+ M K++ SW ++I G+
Sbjct: 318 GRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGF 377
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
A HG + +L+ +M+ G+ P+D+TF+ LL ACSH+G G +F M Y I P+
Sbjct: 378 AMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPK 437
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
EH+ C++DL G + A MI+ M ++P +W ++L AC +GN L E ARNL
Sbjct: 438 LEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLM 497
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+EPE +YV+LSNIY AG WD K R L+ + ++K PG S ++
Sbjct: 498 KVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIE 545
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 151/452 (33%), Positives = 227/452 (50%), Gaps = 43/452 (9%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ LL+ C KA + IH H++ GYE +L++ T +I YA+ G + A K FDR
Sbjct: 68 TFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRS 127
Query: 92 PERNVVSWTAMISGYAQNG--------YDE-----------------------NALLVFS 120
R+VVS+TA+I+GYA +G +DE AL +F
Sbjct: 128 SHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFK 187
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M+++ VR ++ T + L ACA+ R ++ GR + I F NL + +AL+DLY+KCG
Sbjct: 188 EMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCG 247
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+E A LFE + KDVVSWN +IGG ++ LF+ M+R G P+ T+ SIL
Sbjct: 248 QVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILP 307
Query: 241 --ASVGGIELMKISQIHDLIIKLGLESSN--KLTGSLIDVYAKYGSIRSAYQLYRSMLKT 296
A +G I++ + IH I K + +N L SLID+YAK G I +A+Q++ SML
Sbjct: 308 ACAHLGAIDIGR--WIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHK 365
Query: 297 DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI 356
+ S A+I GFA + FDLF M + DD+ +L+ C++ L+LGR I
Sbjct: 366 SLSSWNAMIFGFAM-HGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHI 424
Query: 357 -HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHG 414
+ Y + +ID+ SG +A M + + + W SL+ +HG
Sbjct: 425 FKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHG 484
Query: 415 YGHEAIELYKK--MKHEGMVPNDVTFLSLLFA 444
E E + + MK E P LS ++A
Sbjct: 485 -NLELAESFARNLMKVEPENPGSYVLLSNIYA 515
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 162/317 (51%), Gaps = 18/317 (5%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+TG K+AL+ T + P T +++L C ++ +H+ I +G+ SNL
Sbjct: 175 ETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLK 234
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ +I Y+K G V +A F+ + ++VVSW +I GY + ALL+F MLRSG
Sbjct: 235 IVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSG 294
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKG-RFVENL-FVKSALLDLYAKCGWIED 184
N T S L ACA + + GR I I K + V N ++++L+D+YAKCG IE
Sbjct: 295 ESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEA 354
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA--S 242
A +F + K + SWNAMI G AM G + F LF M + G++PD T +L A
Sbjct: 355 AHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSH 414
Query: 243 VGGIELMK-----ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKT 296
G ++L + ++Q +D+ KL + G +ID+ G + A ++ ++M ++
Sbjct: 415 SGKLDLGRHIFKSMTQDYDITPKL------EHYGCMIDLLGHSGLFKEAKEMIKTMPMEP 468
Query: 297 DIISCTALISGFARDDN 313
D + +L+ R N
Sbjct: 469 DGVIWCSLLKACRRHGN 485
>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 755
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 191/580 (32%), Positives = 306/580 (52%), Gaps = 10/580 (1%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITN 59
I+ +TG++ +A + PS T +SLL F + + A Q +H I
Sbjct: 132 TIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTVLSLL-FGVSELAHVQC--LHGCAILY 188
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G+ S+++LS ++ Y K G++ +RK FD M R++VSW ++IS YAQ G LL+
Sbjct: 189 GFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLL 248
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
M G A T+ S L A L+ GR + G I + F + V+++L+ +Y K
Sbjct: 249 KTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKG 308
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G I+ A+ +FER KDVV W AMI GL G D + +FR M++ G+KP T+ S++
Sbjct: 309 GKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVI 368
Query: 240 RA--SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
A +G L + I I++ L SL+ +YAK G + + ++ M + D
Sbjct: 369 TACAQLGSYNLG--TSILGYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRD 426
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
++S A+++G+A++ + EA LF +M D + + +L CA+ L+LG+ IH
Sbjct: 427 LVSWNAMVTGYAQN-GYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKWIH 485
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
+F + V +L+DMY K G++ A R F++M +++SW+++I GY HG G
Sbjct: 486 SFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAIIVGYGYHGKGE 545
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
A+ Y K GM PN V FLS+L +CSH GL +G ++ M + I P EH +CV
Sbjct: 546 AALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTKDFGIAPDLEHHACV 605
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKS 537
VDL +R G++E AYN+ ++ P + IL AC GN LG+ A ++ + P +
Sbjct: 606 VDLLSRAGRVEEAYNVYKKKFPDPVLDVLGIILDACRANGNNELGDTIANDILMLRPMDA 665
Query: 538 VNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
N+V L++ Y + W+ + M L+K PG+SF+
Sbjct: 666 GNFVQLAHCYASINKWEEVGEAWTYMRSLGLKKIPGWSFI 705
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 154/504 (30%), Positives = 261/504 (51%), Gaps = 19/504 (3%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ SLL+ C +H I+ +G + ++++ +I FYAK G ARK F
Sbjct: 60 DAYTFPSLLKACSFLNLFSLGLTLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVF 119
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSAL---RACARMR 145
D MPERNVV WT +I Y++ G A +F M R G++ + T S L A ++
Sbjct: 120 DYMPERNVVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTVLSLLFGVSELAHVQ 179
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
L G ++ G F+ ++ + +++L++Y KCG IE + LF+ ++ +D+VSWN++I
Sbjct: 180 CLHGCAILYG------FMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLIS 233
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
A G + L ++M QG + T GS+L + EL +H I++ G
Sbjct: 234 AYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCLHGQILRAGFYL 293
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ SLI VY K G I A++++ D++ TA+ISG ++ + K A +F+ M
Sbjct: 294 DAHVETSLIVVYLKGGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSADK-ALAVFRQM 352
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ + + ++ CA + S NLG I + + + D A N+L+ MYAK G +
Sbjct: 353 LKFGVKPSTATMASVITACAQLGSYNLGTSILGYILRQELPLDVATQNSLVTMYAKCGHL 412
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
++ FD M ++++SW +++ GYA++GY EA+ L+ +M+ + P+ +T +SLL C
Sbjct: 413 DQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGC 472
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
+ TG G + + +I + + P + +VD++ + G L++A QM P+ L
Sbjct: 473 ASTGQLHLGKWIHSFVI-RNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQM---PSHDL 528
Query: 506 --WSAILGACSIYGNTSLGELAAR 527
WSAI+ YG GE A R
Sbjct: 529 VSWSAIIVG---YGYHGKGEAALR 549
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 213/413 (51%), Gaps = 6/413 (1%)
Query: 98 SWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSI 157
S A I+ ++ G L +++ML++ V ++ +T+ S L+AC+ + G + I
Sbjct: 28 SVNATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRI 87
Query: 158 QKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSF 217
+ ++ S+L++ YAK G+ + A +F+ + ++VV W +IG + G ++F
Sbjct: 88 LVSGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAF 147
Query: 218 WLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVY 277
LF M RQG++P T+ S+L G EL + +H I G S L+ S+++VY
Sbjct: 148 SLFDEMRRQGIQPSSVTVLSLL---FGVSELAHVQCLHGCAILYGFMSDINLSNSMLNVY 204
Query: 278 AKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVIL 337
K G+I + +L+ M D++S +LIS +A+ N E L K M L+
Sbjct: 205 GKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNIC-EVLLLLKTMRLQGFEAGPQTF 263
Query: 338 CLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD 397
+L++ A+ L LGR +H + DA V +LI +Y K G+I A R F+ D
Sbjct: 264 GSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSD 323
Query: 398 KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWEL 457
K+V+ WT++I+G ++G +A+ ++++M G+ P+ T S++ AC+ G G +
Sbjct: 324 KDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGTSI 383
Query: 458 FTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
++ + L A S +V ++A+ G L+ + + MN + S W+A++
Sbjct: 384 LGYILRQELPLDVATQNS-LVTMYAKCGHLDQSSIVFDMMNRRDLVS-WNAMV 434
>gi|449440359|ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Cucumis sativus]
Length = 595
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 182/588 (30%), Positives = 324/588 (55%), Gaps = 35/588 (5%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
++ S Y L+Q C D R +HA ++ + + L +K+I FY+K G + A
Sbjct: 1 MNYSAYGRLIQHCTDHLFFRVGKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNV 60
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG---VRANQFTYSSALRACARM 144
F ++P +N+ SW A++ Y + + L +FS+++ S V+ ++FT + AL+A A +
Sbjct: 61 FGKIPRKNIFSWNALLISYTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCALKALASL 120
Query: 145 RWLQG-GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
G + + I + ++FV +AL+ Y++C + A I+F+R+ +D+VSWNAM
Sbjct: 121 FSNSGLAKEVHSFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMPERDIVSWNAM 180
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQ-GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
+ G + G + LFR M+ +KP+ T S+L+A +L+ ++H + +
Sbjct: 181 LAGYSQGGSYEKCKELFRVMLSSLEVKPNALTAVSVLQACAQSNDLIFGIEVHRFVNESQ 240
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGF--------ARD--- 311
++ L ++I +YAK GS+ A +L+ ML+ D I+ ++ISG+ A D
Sbjct: 241 IKMDVSLWNAVIGLYAKCGSLDYARELFEEMLEKDAITYCSMISGYMVHGFVNQAMDLFR 300
Query: 312 -------------------DNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNL 352
+N + A D+F+ M + V L +L + ++ ++L
Sbjct: 301 EQERPRLPTWNAVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKG 360
Query: 353 GRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAK 412
G++IH +A + + V A+ID YAK G + A FD++ +++I+WTS+I+ YA
Sbjct: 361 GKEIHGYAIRNTYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAV 420
Query: 413 HGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAE 472
HG + A+ L+ +M G+ P+ VTF S+L AC+H+G E W++F ++ +Y I P E
Sbjct: 421 HGDANVALSLFYEMLTNGIQPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVE 480
Query: 473 HFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDM 532
H++C+V + +R G+L A I +M ++PTA +W A+L S+ G+ LG+ LF++
Sbjct: 481 HYACMVGVLSRAGKLSDAVEFISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEI 540
Query: 533 EPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSS 580
EPE + NYV+++N+Y+ +G W +A R LM+E L+K PG S++++S
Sbjct: 541 EPENTGNYVIMANLYSQSGRWKDADTIRDLMKEVRLKKIPGNSWIETS 588
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 190/585 (32%), Positives = 308/585 (52%), Gaps = 17/585 (2%)
Query: 13 LKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLI-----------HAHIITNGY 61
+Q LK ++ D L S + L+ I H I H +
Sbjct: 11 FRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQTH 70
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSA 121
E N+ +I YAK + A FD++P+ ++VS+ +I+ YA G +AL +F
Sbjct: 71 EPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGE 130
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
M G+ + FT+S + AC L R + F + VK++LL Y+K G
Sbjct: 131 MREMGLVMDGFTFSGVITACCNHVGLI--RQLHSLAFSSGFDSYVSVKNSLLTYYSKNGI 188
Query: 182 IEDAWILFERI--ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
+E+A ++F + E +D VSWN+MI + L+R M+ +G + D FTL S+L
Sbjct: 189 LEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVL 248
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGS-IRSAYQLYRSMLKTDI 298
+L Q H IK G + + LID+YAK G+ + + +++ + +D+
Sbjct: 249 TTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDL 308
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
+ +ISG++++ S EA + F+ M DD ++ C+N++S + G+Q HA
Sbjct: 309 VVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHA 368
Query: 359 FAFKYQ-SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
A K + S +V NAL+ MY+K G + DA + F M N ++ S+IAGYA+HG G
Sbjct: 369 LAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGT 428
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
E++ L+++M + P +T +S+L AC+HTG EG + F M + + I P AEH+SC+
Sbjct: 429 ESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCM 488
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKS 537
+DL R G+L A +I M P ++ W+A+LGAC YGN L E AA +EP +
Sbjct: 489 IDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNA 548
Query: 538 VNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
V Y++L+++Y+AA W+ A + RKLM +R +RK PG S+++ +K+
Sbjct: 549 VPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKR 593
>gi|224058449|ref|XP_002299515.1| predicted protein [Populus trichocarpa]
gi|222846773|gb|EEE84320.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 166/521 (31%), Positives = 284/521 (54%), Gaps = 4/521 (0%)
Query: 63 SNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAM 122
S++H S V+ YA+ G + A K FD + E +VVSWT I G A +G++ A+ +F +
Sbjct: 7 SSMHFSNAVMSMYARCGREVDAIKVFDEIAEPDVVSWTERI-GTASDGHE--AVELFRIV 63
Query: 123 LRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWI 182
L G+ N++T + L +++L G+ IQ K + + + V +AL+ +Y KCG I
Sbjct: 64 LSLGLDVNEYTLINVLSMIGGVKFLNAGKQIQALCHKTGYFQVVSVSNALVSMYGKCGQI 123
Query: 183 EDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS 242
DA +F + +D VSWN++I + GF + + +F M ++P TL SIL A
Sbjct: 124 CDACRVFYNMIIRDSVSWNSLISACSENGFVNQALEVFYQMRELSLQPTIHTLASILEAV 183
Query: 243 VGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCT 302
++ QIH L++K G + LI Y + S+ + +++ + K +++
Sbjct: 184 SNSNNTKQVIQIHSLVVKCGFMFDVSMISCLITAYGRCNSMDESKRVFAEIDKVNLVHLN 243
Query: 303 ALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK 362
+I+ F R ++ +A L++ + +D ++L C+ + + LGR +H+ K
Sbjct: 244 TMITTFVRAGYYT-DALALYQTIWSLHRKVDSRTFSIILKACSAITDMQLGRAVHSLVLK 302
Query: 363 YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIEL 422
D+ V +++ID+Y K G I A +AF ++ +W +++ GYA HG E +L
Sbjct: 303 TGFDQDSFVESSVIDIYCKCGSIGQAEKAFRSSSMNSLAAWNAMMMGYAHHGCYQEVFDL 362
Query: 423 YKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFA 482
+ KM G+ P+++T+L +L +C H GL E M + I+P EH++C++DL
Sbjct: 363 FNKMSQFGIEPDEITYLGVLSSCCHGGLVKEARHYLDSMFELHGIIPHLEHYACMIDLLG 422
Query: 483 RRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVV 542
R G LE A I M I+P +W +L AC+I+G+ LG +AAR L ++ PE Y++
Sbjct: 423 RVGLLEDAKKTIDHMPIQPDVHIWQILLSACNIHGHVELGRVAARKLLEIHPENESAYIL 482
Query: 543 LSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKN 583
LSN+Y + G W+ + RK M+E++LRK PG S++Q +K+
Sbjct: 483 LSNLYASVGMWNAVGRLRKEMKEKNLRKEPGSSWIQVGRKS 523
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 166/359 (46%), Gaps = 3/359 (0%)
Query: 59 NGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLV 118
GY + +S ++ Y K G + A + F M R+ VSW ++IS ++NG+ AL V
Sbjct: 101 TGYFQVVSVSNALVSMYGKCGQICDACRVFYNMIIRDSVSWNSLISACSENGFVNQALEV 160
Query: 119 FSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
F M ++ T +S L A + + I + K F+ ++ + S L+ Y +
Sbjct: 161 FYQMRELSLQPTIHTLASILEAVSNSNNTKQVIQIHSLVVKCGFMFDVSMISCLITAYGR 220
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
C ++++ +F I++ ++V N MI G+ D+ L++++ K D T I
Sbjct: 221 CNSMDESKRVFAEIDKVNLVHLNTMITTFVRAGYYTDALALYQTIWSLHRKVDSRTFSII 280
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
L+A ++ +H L++K G + + + S+ID+Y K GSI A + +RS +
Sbjct: 281 LKACSAITDMQLGRAVHSLVLKTGFDQDSFVESSVIDIYCKCGSIGQAEKAFRSSSMNSL 340
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
+ A++ G+A + +E FDLF M + D++ +L+ C + + R
Sbjct: 341 AAWNAMMMGYAHHGCY-QEVFDLFNKMSQFGIEPDEITYLGVLSSCCHGGLVKEARHYLD 399
Query: 359 FAFKYQSSYDAAVGNA-LIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHGY 415
F+ A +ID+ + G + DA + D M +V W L++ HG+
Sbjct: 400 SMFELHGIIPHLEHYACMIDLLGRVGLLEDAKKTIDHMPIQPDVHIWQILLSACNIHGH 458
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 141/288 (48%), Gaps = 3/288 (1%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITN 59
+++ A + G + QAL+ + L P+ T S+L+ + +Q IH+ ++
Sbjct: 143 SLISACSENGFVNQALEVFYQMRELSLQPTIHTLASILEAVSNSNNTKQVIQIHSLVVKC 202
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G+ ++ + + +I Y + + +++ F + + N+V MI+ + + GY +AL ++
Sbjct: 203 GFMFDVSMISCLITAYGRCNSMDESKRVFAEIDKVNLVHLNTMITTFVRAGYYTDALALY 262
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
+ + + T+S L+AC+ + +Q GR + + K F ++ FV+S+++D+Y KC
Sbjct: 263 QTIWSLHRKVDSRTFSIILKACSAITDMQLGRAVHSLVLKTGFDQDSFVESSVIDIYCKC 322
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G I A F + +WNAM+ G A G + F LF M + G++PD T +L
Sbjct: 323 GSIGQAEKAFRSSSMNSLAAWNAMMMGYAHHGCYQEVFDLFNKMSQFGIEPDEITYLGVL 382
Query: 240 RASVGGIELMKISQIHDLIIKL-GLESSNKLTGSLIDVYAKYGSIRSA 286
+ G + + D + +L G+ + +ID+ + G + A
Sbjct: 383 SSCCHGGLVKEARHYLDSMFELHGIIPHLEHYACMIDLLGRVGLLEDA 430
>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
Length = 770
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 176/547 (32%), Positives = 297/547 (54%), Gaps = 11/547 (2%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y+ LL C++ + A +H H+ G +++ ++T ++ Y + AR+ FD MP
Sbjct: 81 YVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMP 140
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
ERNVV+WTA+++GY N L VF ML G + +T + L AC + G+
Sbjct: 141 ERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQ 200
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM-QG 211
+ G K + ++L LYAK G ++ A F RI K+V++W MI A +
Sbjct: 201 VHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEE 260
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
+ LF M+ G+ P+ FTL S++ ++L Q+ K+G E++ +
Sbjct: 261 CVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKN 320
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFA------RDDNHSK----EAFDL 321
S + +Y + G A +L+ M II+ A+ISG+A +DD ++ +A +
Sbjct: 321 STMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTI 380
Query: 322 FKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
F+D+ M D +L++C+ + +L G QIHA K D V +AL++MY K
Sbjct: 381 FRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNK 440
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
G I DAN+AF EM + ++WTS+I+GY++HG EAI+L+++M+ G+ PN++TF+SL
Sbjct: 441 CGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSL 500
Query: 442 LFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
L ACS+ GL E F M +Y I P +H+ C++D+F R G++E A++ I++ +P
Sbjct: 501 LSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEP 560
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRK 561
++WS+++ C +GN L AA L +++P+ Y++L N+Y + W + + RK
Sbjct: 561 NEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRK 620
Query: 562 LMEERSL 568
LM++ +
Sbjct: 621 LMKQEDV 627
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 200/408 (49%), Gaps = 13/408 (3%)
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
ML G Y L C L R + G + K ++FV ++L++ Y +C
Sbjct: 69 MLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSA 128
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
DA LF+ + ++VV+W A++ G + +F M+ G P +TLG+ L A
Sbjct: 129 ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNA 188
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC 301
+ ++ Q+H IK G ES + SL +YAK GS+ SA + + + + ++I+
Sbjct: 189 CLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITW 248
Query: 302 TALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF 361
T +IS A D+ + LF DM++ + ++ L ++++C LNLG+Q+ AF+F
Sbjct: 249 TTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSF 308
Query: 362 KYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAK--------- 412
K + V N+ + +Y + GE +A R F++M D ++I+W ++I+GYA+
Sbjct: 309 KIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDL 368
Query: 413 --HGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
G +A+ +++ +K M P+ TF S+L CS +G ++ I K L
Sbjct: 369 QARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTI-KSGFLSD 427
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
S +V+++ + G ++ A +M + T W++++ S +G
Sbjct: 428 VVVNSALVNMYNKCGCIQDANKAFLEMPTR-TFVTWTSMISGYSQHGQ 474
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 156/325 (48%), Gaps = 13/325 (4%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T S++ C + + A G E+NL + + Y + G+ A + F++M
Sbjct: 283 TLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQM 342
Query: 92 PERNVVSWTAMISGYAQ---NGYDE--------NALLVFSAMLRSGVRANQFTYSSALRA 140
+ ++++W AMISGYAQ + D+ AL +F + RS ++ + FT+SS L
Sbjct: 343 EDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSV 402
Query: 141 CARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSW 200
C+ M L+ G I K F+ ++ V SAL+++Y KCG I+DA F + + V+W
Sbjct: 403 CSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTW 462
Query: 201 NAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIK 260
+MI G + G ++ LF M G++P+ T S+L A + + D++ K
Sbjct: 463 TSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKK 522
Query: 261 -LGLESSNKLTGSLIDVYAKYGSIRSAYQ-LYRSMLKTDIISCTALISGFARDDNHSKEA 318
+E G +ID++ + G + A+ + R+ + + ++L++G N
Sbjct: 523 EYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAF 582
Query: 319 FDLFKDMILKKMGIDDVILCLMLNI 343
+ K + LK GI+ IL L + I
Sbjct: 583 YAADKLLELKPKGIETYILLLNMYI 607
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 113/214 (52%), Gaps = 8/214 (3%)
Query: 8 FKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHL 67
F+ + + LK S+ PD T+ S+L C A Q IHA I +G+ S++ +
Sbjct: 375 FQALTIFRDLKRSVMKPDLF----TFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVV 430
Query: 68 STKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV 127
++ ++ Y K G + A KAF MP R V+WT+MISGY+Q+G + A+ +F M +GV
Sbjct: 431 NSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGV 490
Query: 128 RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK-SALLDLYAKCGWIEDAW 186
R N+ T+ S L AC+ ++ ++K +E + ++D++ + G +EDA+
Sbjct: 491 RPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAF 550
Query: 187 ILFER--IERKDVVSWNAMIGGLAMQGFNDDSFW 218
+R E + + W++++ G G + +F+
Sbjct: 551 SFIKRTGFEPNEAI-WSSLVAGCRSHGNMELAFY 583
>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 793
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 195/559 (34%), Positives = 299/559 (53%), Gaps = 10/559 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD +Y +L C K +IH I G + L+ +I Y K + AR
Sbjct: 108 LDKFSYAGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLL 167
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC--ARMR 145
F+ E + VSW ++I+GYA+ G E L + M +G+R N FT SAL++C
Sbjct: 168 FESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNN 227
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
+ G+ + G K ++ V +ALLD+YAK G++ DA LF ++VV +NAMI
Sbjct: 228 MVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIA 287
Query: 206 GLAMQGFND-----DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS-QIHDLII 259
G D ++ LF M RQG+KP FT SI++ IE + QIH I
Sbjct: 288 GFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKI-CNHIEAFEYGKQIHAHIC 346
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
K ++S + +LI++Y+ GS + + S K DI+S T +I+G+A++ + A
Sbjct: 347 KHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQF-ESAL 405
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMY 379
LF +++ D+ I+ ML+ CA+VA+ G Q+H +A K A V N+ I MY
Sbjct: 406 ALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMY 465
Query: 380 AKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFL 439
AKSG + A F+E+ + +V+SW+ +I A+HG+ +AI L++ MK G+ PN +TFL
Sbjct: 466 AKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFL 525
Query: 440 SLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
+L ACSH GL EG + M Y + +H +C+VDL +R G+L A N I
Sbjct: 526 GVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGF 585
Query: 500 KPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKT 559
+W +L C IY + G+ A L +++P++S +YV+L NIYT AG A K
Sbjct: 586 GDHPVMWRTLLSGCRIYKDIVTGKHVAEKLIELDPQESSSYVLLYNIYTDAGIDLPATKI 645
Query: 560 RKLMEERSLRKNPGYSFLQ 578
R+LM++R +RK PG S+++
Sbjct: 646 RELMKDRGIRKEPGQSWIE 664
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 147/516 (28%), Positives = 266/516 (51%), Gaps = 22/516 (4%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD Y L+QF + L HAH+I + L L + Y+K G++ +A+K
Sbjct: 7 LDSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKL 66
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FDRM ER+V+S+ +ISGY G+ A+ +FS + ++ ++F+Y+ L AC +++
Sbjct: 67 FDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDF 126
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G++I G + +F+ + L+D+Y KC I+ A +LFE + D VSWN++I G
Sbjct: 127 ALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGY 186
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI--SQIHDLIIKLGLES 265
A G ++ L M G++ + FTLGS L++ + M +H +K GL+
Sbjct: 187 ARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDL 246
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSK----EAFDL 321
+ +L+D+YAK G + A QL+R+ +++ A+I+GF + ++ K EA L
Sbjct: 247 DIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKL 306
Query: 322 FKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
F M + + D ++ IC ++ + G+QIHA K+ D +G+ LI++Y+
Sbjct: 307 FSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSL 366
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
G D + F+ +++SWT++IAGYA++G A+ L+ ++ G P++ ++
Sbjct: 367 LGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTM 426
Query: 442 LFACS-----HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQ 496
L AC+ +G G+ + T I I+ ++ + ++A+ G L+SA +
Sbjct: 427 LSACADVAAERSGEQVHGYAVKTG-IGTLAIVQNSQ-----ISMYAKSGNLDSAKITFEE 480
Query: 497 MNIKPTASLWSAILGACSIYGNTSLGELAARNLFDM 532
+ P WS ++ + + +G+ A NLF++
Sbjct: 481 IK-NPDVVSWSVMICSNAQHGHAK----DAINLFEL 511
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 90/180 (50%), Gaps = 3/180 (1%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ GQ + AL + P ++ ++L C D AER +H + + G +
Sbjct: 397 QNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAI 456
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ I YAK G++ SA+ F+ + +VVSW+ MI AQ+G+ ++A+ +F M G
Sbjct: 457 VQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYG 516
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVE-NLFVKSALLDLYAKCGWIEDA 185
+ NQ T+ L AC+ ++ G S++K ++ N+ + ++DL ++ G + DA
Sbjct: 517 IHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDA 576
>gi|356506341|ref|XP_003521943.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial-like [Glycine max]
Length = 895
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 183/565 (32%), Positives = 305/565 (53%), Gaps = 11/565 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
DP TY S L FC +H+ ++ G + + ++ Y++ G + AR+
Sbjct: 173 FDPVTYTSALAFCWGDHGFLFGWQLHSLVVKCGLGCEVFIGNALVTMYSRWGMLDEARRV 232
Query: 88 FDRMPERNVVSWTAMISGYAQNG--YDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
FD MPER++VSW AMISGYAQ G Y A+L+F M+R G+ + + + A+ AC M+
Sbjct: 233 FDEMPERDLVSWNAMISGYAQEGKCYGLEAVLLFVNMVRHGMLIDHVSLTGAVSACGHMK 292
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
L+ GR I G QK + ++ V + L+ Y+KC +DA +FE I ++VVSW MI
Sbjct: 293 NLELGRQIHGLTQKVGYGTHVSVCNVLMSTYSKCEVPKDAKAVFESISNRNVVSWTTMI- 351
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
+D+ LF +M G+ P+ T ++ A + + IH L IK S
Sbjct: 352 ----SIDEEDAVSLFNAMRVNGVYPNDVTFIGLIHAVTIRNLVTEGLTIHGLCIKSCFLS 407
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
++ S I +YAK+ I+ + +++ + + +S ALISG+A++ ++ KEA +
Sbjct: 408 EQTVSNSFITMYAKFECIQESTKIFEELNCRETVSWNALISGYAQNGSY-KEALLTYLSA 466
Query: 326 ILKKMGIDDVILCLMLNICANVA--SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
+ K++ + +LN A SLN G+ H+ K D V AL+DMY K G
Sbjct: 467 V-KEIKPNQYTFGSVLNAIAAAEDISLNHGKSCHSHLLKLGLGTDPIVSGALLDMYGKRG 525
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
+I ++ R F+E ++ +WT++I+ YA+HG + LY +M+ EG+ P+ +TFLS+L
Sbjct: 526 DIIESQRVFNETLERTQFAWTAIISAYARHGDFESVMSLYTEMEREGINPDSITFLSVLA 585
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
AC G+ G +F M+ K+ I P +EH+S +VD+ R G+L+ A ++ Q+ P
Sbjct: 586 ACCRKGMVDAGHRVFDSMVKKHSIEPTSEHYSIMVDMLGRVGRLDEAEELMHQIPGGPGL 645
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
S+ ++LG+C ++GN + E L +M+P S YV+++N+Y G W+ + R+ M
Sbjct: 646 SVLQSLLGSCRLHGNMEMAEKVVGRLIEMDPASSGPYVLMANLYAEKGKWEKVAEVRRGM 705
Query: 564 EERSLRKNPGYSFLQSSKKNILLLE 588
R ++K G+S++ S + L L
Sbjct: 706 RGRGVKKEVGFSWVDVSNVDSLYLH 730
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 146/568 (25%), Positives = 258/568 (45%), Gaps = 56/568 (9%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IH + +G+ S + +S ++ Y K G+ A F+ + ++VSW ++SG+ ++
Sbjct: 99 IHGFAVCSGFVSFVTVSNSLMKMYCKSGNFGKALIVFENLSHPDIVSWNTVLSGFEES-- 156
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+AL +M G+ + TY+SAL C G + + K +F+ +A
Sbjct: 157 -VDALNFARSMHYCGIAFDPVTYTSALAFCWGDHGFLFGWQLHSLVVKCGLGCEVFIGNA 215
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG--FNDDSFWLFRSMMRQGMK 229
L+ +Y++ G +++A +F+ + +D+VSWNAMI G A +G + ++ LF +M+R GM
Sbjct: 216 LVTMYSRWGMLDEARRVFDEMPERDLVSWNAMISGYAQEGKCYGLEAVLLFVNMVRHGML 275
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
D +L + A L QIH L K+G + + L+ Y+K + A +
Sbjct: 276 IDHVSLTGAVSACGHMKNLELGRQIHGLTQKVGYGTHVSVCNVLMSTYSKCEVPKDAKAV 335
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ S+ +++S T +IS D A LF M + + +DV +++
Sbjct: 336 FESISNRNVVSWTTMISIDEED------AVSLFNAMRVNGVYPNDVTFIGLIHAVTIRNL 389
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
+ G IH K + V N+ I MYAK I ++ + F+E+ + +SW +LI+G
Sbjct: 390 VTEGLTIHGLCIKSCFLSEQTVSNSFITMYAKFECIQESTKIFEELNCRETVSWNALISG 449
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS-------HTGLTCEGWEL----- 457
YA++G EA+ Y E + PN TF S+L A + + G +C L
Sbjct: 450 YAQNGSYKEALLTYLSAVKE-IKPNQYTFGSVLNAIAAAEDISLNHGKSCHSHLLKLGLG 508
Query: 458 ---------------FTDMINKYRI----LPRAEH-FSCVVDLFARRGQLESAYNMIRQM 497
D+I R+ L R + ++ ++ +AR G ES ++ +M
Sbjct: 509 TDPIVSGALLDMYGKRGDIIESQRVFNETLERTQFAWTAIISAYARHGDFESVMSLYTEM 568
Query: 498 N---IKPTASLWSAILGACSIYGNTSLGELAARNLF---DMEPEKSVNYVVLSNIYTAAG 551
I P + + ++L AC G G ++ +EP S +Y ++ ++ G
Sbjct: 569 EREGINPDSITFLSVLAACCRKGMVDAGHRVFDSMVKKHSIEP-TSEHYSIMVDMLGRVG 627
Query: 552 AWDNARKTRKLMEERSLRKNPGYSFLQS 579
D A +LM + + PG S LQS
Sbjct: 628 RLDEA---EELMHQ--IPGGPGLSVLQS 650
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 207/426 (48%), Gaps = 15/426 (3%)
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSA--MLRSGVRANQFTYSSALRACARMR 145
FD +P N S + + AL F L S ++ T + +L+AC
Sbjct: 34 FDFIPHPNAASVNHSMLNCLHSRLPFQALTAFKNHFQLHSLENVDEVTVALSLKACQGES 93
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
L G I G FV + V ++L+ +Y K G A I+FE + D+VSWN ++
Sbjct: 94 KL--GCQIHGFAVCSGFVSFVTVSNSLMKMYCKSGNFGKALIVFENLSHPDIVSWNTVLS 151
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
G + D+ RSM G+ D T S L G + Q+H L++K GL
Sbjct: 152 GFEE---SVDALNFARSMHYCGIAFDPVTYTSALAFCWGDHGFLFGWQLHSLVVKCGLGC 208
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN-HSKEAFDLFKD 324
+ +L+ +Y+++G + A +++ M + D++S A+ISG+A++ + EA LF +
Sbjct: 209 EVFIGNALVTMYSRWGMLDEARRVFDEMPERDLVSWNAMISGYAQEGKCYGLEAVLLFVN 268
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M+ M ID V L ++ C ++ +L LGRQIH K +V N L+ Y+K
Sbjct: 269 MVRHGMLIDHVSLTGAVSACGHMKNLELGRQIHGLTQKVGYGTHVSVCNVLMSTYSKCEV 328
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
DA F+ + ++NV+SWT++I+ + +A+ L+ M+ G+ PNDVTF+ L+ A
Sbjct: 329 PKDAKAVFESISNRNVVSWTTMISIDEE-----DAVSLFNAMRVNGVYPNDVTFIGLIHA 383
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
+ L EG + I K L + + ++A+ ++ + + ++N + T S
Sbjct: 384 VTIRNLVTEGLTIHGLCI-KSCFLSEQTVSNSFITMYAKFECIQESTKIFEELNCRETVS 442
Query: 505 LWSAIL 510
W+A++
Sbjct: 443 -WNALI 447
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 184/392 (46%), Gaps = 11/392 (2%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L+D + + C K IH GY +++ + ++ Y+K A+
Sbjct: 275 LIDHVSLTGAVSACGHMKNLELGRQIHGLTQKVGYGTHVSVCNVLMSTYSKCEVPKDAKA 334
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
F+ + RNVVSWT MIS +E+A+ +F+AM +GV N T+ + A
Sbjct: 335 VFESISNRNVVSWTTMIS-----IDEEDAVSLFNAMRVNGVYPNDVTFIGLIHAVTIRNL 389
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
+ G I G K F+ V ++ + +YAK I+++ +FE + ++ VSWNA+I G
Sbjct: 390 VTEGLTIHGLCIKSCFLSEQTVSNSFITMYAKFECIQESTKIFEELNCRETVSWNALISG 449
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLE 264
A G ++ + S +++ +KP+ +T GS+L A+ I L H ++KLGL
Sbjct: 450 YAQNGSYKEALLTYLSAVKE-IKPNQYTFGSVLNAIAAAEDISLNHGKSCHSHLLKLGLG 508
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ ++G+L+D+Y K G I + +++ L+ + TA+IS +AR + + L+ +
Sbjct: 509 TDPIVSGALLDMYGKRGDIIESQRVFNETLERTQFAWTAIISAYARHGDF-ESVMSLYTE 567
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG-NALIDMYAKSG 383
M + + D + +L C ++ G ++ K S + + ++DM + G
Sbjct: 568 MEREGINPDSITFLSVLAACCRKGMVDAGHRVFDSMVKKHSIEPTSEHYSIMVDMLGRVG 627
Query: 384 EIADANRAFDEM-GDKNVISWTSLIAGYAKHG 414
+ +A ++ G + SL+ HG
Sbjct: 628 RLDEAEELMHQIPGGPGLSVLQSLLGSCRLHG 659
>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 780
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 189/560 (33%), Positives = 309/560 (55%), Gaps = 7/560 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L+ ++ +S++ C ++ E+ IHA + G + ++L+ ++ Y K GDV ++ +
Sbjct: 218 LNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQV 277
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD M E+N VSW + I + G+ + L +F M V T SS L A +
Sbjct: 278 FDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSF 337
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
GR + G K ++FV ++L+D+YAK G +E A +FE+++ ++VVSWNAMI L
Sbjct: 338 DLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANL 397
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
G ++F L M + G P+ TL ++L A L QIH I+ GL
Sbjct: 398 VQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDL 457
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
++ +LID+Y+K G + A ++ K D +S LI G+++ E+ LFK M
Sbjct: 458 FISNALIDMYSKCGQLSLARNIFERSEKDD-VSYNTLILGYSQSP-WCFESLLLFKQM-- 513
Query: 328 KKMGIDDVILCLM--LNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ +GID + M L+ C N++ G++IH + S + N+L+D+Y K G +
Sbjct: 514 RSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGML 573
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A++ F+++ K+V SW ++I GY HG A EL++ MK +G+ + V+++++L AC
Sbjct: 574 VTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAAC 633
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
SH GL +G + F+ M+ + I P+ H++C+VDL R GQL +IR M + +
Sbjct: 634 SHGGLVDKGKKYFSQMVAQ-NIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDV 692
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
W A+LGAC I+GN L + AA +LF+++PE S Y ++ N+Y G W+ A K RKLM+
Sbjct: 693 WGALLGACRIHGNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGRWNEANKIRKLMKS 752
Query: 566 RSLRKNPGYSFLQSSKKNIL 585
R ++KNP YS++Q N L
Sbjct: 753 RKVQKNPAYSWVQDQDGNKL 772
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 148/503 (29%), Positives = 264/503 (52%), Gaps = 14/503 (2%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HA + G+ +++ ++ FYA G AR+ FD MPER+VVSW +++S + NG
Sbjct: 141 LHASALRRGHLADVFTGNTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGM 200
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+A +M+RSG N + S + AC + + G I K + + +A
Sbjct: 201 FHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANA 260
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+D+Y K G +E + +F+ + ++ VSWN+ IG GF D +FR M + P
Sbjct: 261 LVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPG 320
Query: 232 CFTLGSILRASV--GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
TL S+L A V G +L + ++H IK ++ + SL+D+YAK+GS+ A +
Sbjct: 321 SITLSSLLPALVELGSFDLGR--EVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTI 378
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ M +++S A+I+ ++ + EAF L DM + + L +L CA +AS
Sbjct: 379 FEQMKDRNVVSWNAMIANLVQNGAET-EAFRLVTDMQKSGECPNSITLVNVLPACARMAS 437
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
L +G+QIHA++ + +D + NALIDMY+K G+++ A F E +K+ +S+ +LI G
Sbjct: 438 LKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIF-ERSEKDDVSYNTLILG 496
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
Y++ + E++ L+K+M+ G+ + V+F+ L AC++ + G E+ ++ R+L
Sbjct: 497 YSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVR--RLLS 554
Query: 470 RAEHFS-CVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARN 528
S ++DL+ + G L +A + ++ K AS W+ ++ ++G + A
Sbjct: 555 GHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVAS-WNTMILGYGMHGQIDI----AFE 609
Query: 529 LFDMEPEKSVNYVVLSNIYTAAG 551
LF++ ++Y +S I A
Sbjct: 610 LFELMKGDGLDYDHVSYIAVLAA 632
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 130/476 (27%), Positives = 231/476 (48%), Gaps = 19/476 (3%)
Query: 45 AERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER--NVVSWTAM 102
A R+AH A +++ ++L L+ +++ YA + D+ SAR P R + W ++
Sbjct: 31 ALRRAHA--ASLVSGALATSLPLAGALLLSYAALSDLASARLVLRHHPLRLRSAFLWNSL 88
Query: 103 ISGYAQNGYDENALLVFSAMLRSGVRANQ--FTYSSALRACARMRWLQGGRMIQGSIQKG 160
+ AL V++ MLRS VR + F ++ A A G + S +
Sbjct: 89 SRALSSASLPSEALRVYNLMLRSAVRPDDRTFPFALHAAAAAVASAEDKGLELHASALRR 148
Query: 161 RFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLF 220
+ ++F + L+ YA CG DA +F+ + +DVVSWN+++ + G D+
Sbjct: 149 GHLADVFTGNTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRAL 208
Query: 221 RSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKY 280
SMMR G + +L S++ A E IH L +K+GL + L +L+D+Y K+
Sbjct: 209 VSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKF 268
Query: 281 GSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLM 340
G + ++ Q++ ML+ + +S + I F + + +F+ M + + L +
Sbjct: 269 GDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYG-DVLRMFRKMSEHNVMPGSITLSSL 327
Query: 341 LNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNV 400
L + S +LGR++H ++ K D V N+L+DMYAK G + A+ F++M D+NV
Sbjct: 328 LPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNV 387
Query: 401 ISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH-----TGLTCEGW 455
+SW ++IA ++G EA L M+ G PN +T +++L AC+ G W
Sbjct: 388 VSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAW 447
Query: 456 ELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
+ ++ I + ++D++++ GQL A N+ + K S + ILG
Sbjct: 448 SIRRGLMFDLFI------SNALIDMYSKCGQLSLARNIFERSE-KDDVSYNTLILG 496
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 183/558 (32%), Positives = 297/558 (53%), Gaps = 42/558 (7%)
Query: 57 ITNGYESNLHLSTKVIIFYAKVGDVL-SARKAFDRMPERNVVSWTAMISGYAQNGYDENA 115
+ G+E ++ + T ++ Y++ VL +A K F+ M ERN +W+ MI+ + G + A
Sbjct: 251 LKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAA 310
Query: 116 LLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK-SALLD 174
+ V+ R V+ S A R Q GR+ I + E + V +AL+
Sbjct: 311 IAVYE---RDPVK------SIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALIT 361
Query: 175 LYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFT 234
Y + G + +A LF+++ ++ +SW MI G A G ++++ L + + R GM P +
Sbjct: 362 GYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSS 421
Query: 235 LGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML 294
L SI A + L +Q+H L +K+G + ++ +LI +Y K ++ A Q++ M+
Sbjct: 422 LTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMV 481
Query: 295 KTDIISCTALISGFARDD------------------------------NHSKEAFDLFKD 324
DI+S + ++ ++D S EA FK
Sbjct: 482 TKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKT 541
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M + + IL ++L +C ++ + +G+QIH A K + V NALI MY K G
Sbjct: 542 MFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG- 600
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
AD+ R FD M ++++ +W ++I GYA+HG G EAI++Y+ M+ G++PN+VTF+ LL A
Sbjct: 601 CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNA 660
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
CSH GL EGW+ F M Y + P EH++C+VDL R G ++ A I M I+P
Sbjct: 661 CSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTV 720
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
+WSA+LGAC I+ N +G+ AA LF +EP + NYV+LSNIY++ G W + RK+M+
Sbjct: 721 IWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMK 780
Query: 565 ERSLRKNPGYSFLQSSKK 582
++ + K PG S+ Q K
Sbjct: 781 QQGVIKEPGCSWTQIKDK 798
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 127/533 (23%), Positives = 239/533 (44%), Gaps = 51/533 (9%)
Query: 76 AKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYS 135
++G V AR+ FD MP R++++W +MIS Y NG + A ++ A+ +R S
Sbjct: 45 GRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLS 104
Query: 136 SALRACARMRWLQGGRMIQGSIQKGRFVENLFVK-------------------------- 169
R R L+ R+ G +++ N +
Sbjct: 105 GYGRLG---RVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSW 161
Query: 170 SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
+++L Y + DA LFE++ +++VSW MI G + ++ +F M R+G+
Sbjct: 162 NSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLL 221
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI-RSAYQ 288
PD S L A G L + + L +K G E + ++++VY++ S+ +A +
Sbjct: 222 PDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIK 281
Query: 289 LYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
+ SM++ + + + +I+ + A +++ +K + ++ + A
Sbjct: 282 FFESMIERNEYTWSTMIAALSH-GGRIDAAIAVYERDPVKSIACRTALITGL----AQCG 336
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA 408
++ R + F+ NALI Y ++G + +A FD+M +N ISW +IA
Sbjct: 337 RIDDARIL----FEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIA 392
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
GYA++G EA+ L +++ GM+P+ + S+ FACS+ G ++ + + ++
Sbjct: 393 GYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAV---KVG 449
Query: 469 PRAEHFSC--VVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAA 526
+ F+C ++ ++ + +E A + +M K S W++ L A + N L E A
Sbjct: 450 CQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVS-WNSFLAA--LVQNDLLDE--A 504
Query: 527 RNLFD-MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM-EERSLRKNPGYSFL 577
RN FD M V++ + + Y A + A K M E L +P + L
Sbjct: 505 RNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTIL 557
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 128/502 (25%), Positives = 227/502 (45%), Gaps = 61/502 (12%)
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
Y ++ AR F++MPERN+VSWT MISGY + A +F M R G+ +Q +
Sbjct: 168 YCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNF 227
Query: 135 SSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWI-LFERIE 193
+SAL A + L ++ K F ++ + +A+L++Y++ + D I FE +
Sbjct: 228 ASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMI 287
Query: 194 RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP-DCFTLGSILRASVGGIELMKI- 251
++ +W+ MI L+ G D + ++ R +K C T A G I+ +I
Sbjct: 288 ERNEYTWSTMIAALSHGGRIDAAIAVYE---RDPVKSIACRTALITGLAQCGRIDDARIL 344
Query: 252 -SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR 310
QI + I+ S N +LI Y + G + A +L+ M + IS +I+G+A+
Sbjct: 345 FEQIPEPIVV----SWN----ALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQ 396
Query: 311 DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA 370
+ S+EA L +++ M L + C+N+ +L G Q+H+ A K +++
Sbjct: 397 -NGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSF 455
Query: 371 VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG 430
NALI MY K + A + F M K+++SW S +A ++ EA + M
Sbjct: 456 ACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNM---- 511
Query: 431 MVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA 490
+ +DV++ +++ A +H + E F M ++ +
Sbjct: 512 LSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHEL----------------------- 548
Query: 491 YNMIRQMNIKPTASLWSAILGACSIYGNTSLGE----LAARNLFDMEPEKSVNYVVLSNI 546
P + + + +LG C G + +G+ +A + M+ E V ++S +
Sbjct: 549 ----------PNSPILTILLGVCGSLGASKIGQQIHTVAIK--LGMDSELIVANALIS-M 595
Query: 547 YTAAGAWDNARKTRKLMEERSL 568
Y G D +R+ LMEER +
Sbjct: 596 YFKCGCAD-SRRIFDLMEERDI 616
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/408 (20%), Positives = 177/408 (43%), Gaps = 78/408 (19%)
Query: 170 SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
SA + + G + +A +F+ + R+D+++WN+MI G D + L+ ++ M+
Sbjct: 38 SARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMR 97
Query: 230 PDCFTLGSILRASVGGI-ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQ 288
G+IL + G + +++ ++ D + LE + ++I Y + G I A +
Sbjct: 98 T-----GAILLSGYGRLGRVLEARRVFDGM----LERNTVAWNAMISCYVQNGDITMARR 148
Query: 289 LYRSMLKTDI-------------------------------ISCTALISGFARDDNHSKE 317
L+ +M D+ +S T +ISG+ R +NH K
Sbjct: 149 LFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGK- 207
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
A+D+F M + + D L+ + +L++ + A K D +G A+++
Sbjct: 208 AWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILN 267
Query: 378 MYAKSGEIAD-ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV---- 432
+Y++ + D A + F+ M ++N +W+++IA + G AI +Y++ + +
Sbjct: 268 VYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTA 327
Query: 433 -----------------------PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
P V++ +L+ G+ E ELF M + I
Sbjct: 328 LITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTI-- 385
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMN---IKPTASLWSAILGACS 514
++ ++ +A+ G+ E A ++++++ + P+ S ++I ACS
Sbjct: 386 ---SWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACS 430
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/452 (21%), Positives = 166/452 (36%), Gaps = 85/452 (18%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
S+ S+ C + A +H+ + G + N +I Y K ++ AR+ F R
Sbjct: 420 SSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSR 479
Query: 91 MPERNV-------------------------------VSWTAMISGYAQNGYDENALLVF 119
M +++ VSWT +IS YA A+ F
Sbjct: 480 MVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAF 539
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
M N + L C + + G+ I K L V +AL+ +Y KC
Sbjct: 540 KTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKC 599
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G D+ +F+ +E +D+ +WN +I G A G ++ +++ M G+ P+ T +L
Sbjct: 600 G-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLL 658
Query: 240 RA-SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
A S G+ + GL + ++D+ + G ++ A Q
Sbjct: 659 NACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQ---------- 708
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
DM ++ D VI +L C + +G++
Sbjct: 709 ----------------------FIYDMPIEP---DTVIWSALLGACKIHKNAEIGKRAAE 743
Query: 359 FAFKYQSSYDAAVGNALIDMYAKS---GEIADANRAFDEMG--DKNVISWT-------SL 406
F+ + S +A L ++Y+ GE+A+ + + G + SWT S
Sbjct: 744 KLFRIEPS-NAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSF 802
Query: 407 IAGYAKHGYGHEAI----ELYKKMKHEGMVPN 434
+ G +H E + ELY +K G VP+
Sbjct: 803 VTGDKQHEQIEEIVATLEELYTLLKATGYVPD 834
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 81/187 (43%), Gaps = 19/187 (10%)
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
+A I + G + +A FD M +++I+W S+I+ Y +G A +LY + M
Sbjct: 38 SARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMR 97
Query: 433 PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYN 492
+ LL G E +F M+ + + ++ ++ + + G + A
Sbjct: 98 TGAI----LLSGYGRLGRVLEARRVFDGMLERNTVA-----WNAMISCYVQNGDITMARR 148
Query: 493 MIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKS-VNYVVL----SNIY 547
+ M + +S S + G C SL + ARNLF+ PE++ V++ V+ I
Sbjct: 149 LFDAMPSRDVSSWNSMLTGYCH-----SLQMVDARNLFEKMPERNLVSWTVMISGYGRIE 203
Query: 548 TAAGAWD 554
AWD
Sbjct: 204 NHGKAWD 210
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 183/558 (32%), Positives = 297/558 (53%), Gaps = 42/558 (7%)
Query: 57 ITNGYESNLHLSTKVIIFYAKVGDVL-SARKAFDRMPERNVVSWTAMISGYAQNGYDENA 115
+ G+E ++ + T ++ Y++ VL +A K F+ M ERN +W+ MI+ + G + A
Sbjct: 251 LKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAA 310
Query: 116 LLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK-SALLD 174
+ V+ R V+ S A R Q GR+ I + E + V +AL+
Sbjct: 311 IAVYE---RDPVK------SIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALIT 361
Query: 175 LYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFT 234
Y + G + +A LF+++ ++ +SW MI G A G ++++ L + + R GM P +
Sbjct: 362 GYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSS 421
Query: 235 LGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML 294
L SI A + L +Q+H L +K+G + ++ +LI +Y K ++ A Q++ M+
Sbjct: 422 LTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMV 481
Query: 295 KTDIISCTALISGFARDD------------------------------NHSKEAFDLFKD 324
DI+S + ++ ++D S EA FK
Sbjct: 482 TKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKT 541
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M + + IL ++L +C ++ + +G+QIH A K + V NALI MY K G
Sbjct: 542 MFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG- 600
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
AD+ R FD M ++++ +W ++I GYA+HG G EAI++Y+ M+ G++PN+VTF+ LL A
Sbjct: 601 CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNA 660
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
CSH GL EGW+ F M Y + P EH++C+VDL R G ++ A I M I+P
Sbjct: 661 CSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTV 720
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
+WSA+LGAC I+ N +G+ AA LF +EP + NYV+LSNIY++ G W + RK+M+
Sbjct: 721 IWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMK 780
Query: 565 ERSLRKNPGYSFLQSSKK 582
++ + K PG S+ Q K
Sbjct: 781 QQGVIKEPGCSWTQIKDK 798
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 127/533 (23%), Positives = 239/533 (44%), Gaps = 51/533 (9%)
Query: 76 AKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYS 135
++G V AR+ FD MP R++++W +MIS Y NG + A ++ A+ +R S
Sbjct: 45 GRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLS 104
Query: 136 SALRACARMRWLQGGRMIQGSIQKGRFVENLFVK-------------------------- 169
R R L+ R+ G +++ N +
Sbjct: 105 GYGRLG---RVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSW 161
Query: 170 SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
+++L Y + DA LFE++ +++VSW MI G + ++ +F M R+G+
Sbjct: 162 NSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLL 221
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI-RSAYQ 288
PD S L A G L + + L +K G E + ++++VY++ S+ +A +
Sbjct: 222 PDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIK 281
Query: 289 LYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
+ SM++ + + + +I+ + A +++ +K + ++ + A
Sbjct: 282 FFESMIERNEYTWSTMIAALSH-GGRIDAAIAVYERDPVKSIACRTALITGL----AQCG 336
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA 408
++ R + F+ NALI Y ++G + +A FD+M +N ISW +IA
Sbjct: 337 RIDDARIL----FEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIA 392
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
GYA++G EA+ L +++ GM+P+ + S+ FACS+ G ++ + + ++
Sbjct: 393 GYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAV---KVG 449
Query: 469 PRAEHFSC--VVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAA 526
+ F+C ++ ++ + +E A + +M K S W++ L A + N L E A
Sbjct: 450 CQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVS-WNSFLAA--LVQNDLLDE--A 504
Query: 527 RNLFD-MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM-EERSLRKNPGYSFL 577
RN FD M V++ + + Y A + A K M E L +P + L
Sbjct: 505 RNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTIL 557
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 128/502 (25%), Positives = 227/502 (45%), Gaps = 61/502 (12%)
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
Y ++ AR F++MPERN+VSWT MISGY + A +F M R G+ +Q +
Sbjct: 168 YCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNF 227
Query: 135 SSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWI-LFERIE 193
+SAL A + L ++ K F ++ + +A+L++Y++ + D I FE +
Sbjct: 228 ASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMI 287
Query: 194 RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP-DCFTLGSILRASVGGIELMKI- 251
++ +W+ MI L+ G D + ++ R +K C T A G I+ +I
Sbjct: 288 ERNEYTWSTMIAALSHGGRIDAAIAVYE---RDPVKSIACRTALITGLAQCGRIDDARIL 344
Query: 252 -SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR 310
QI + I+ S N +LI Y + G + A +L+ M + IS +I+G+A+
Sbjct: 345 FEQIPEPIVV----SWN----ALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQ 396
Query: 311 DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA 370
+ S+EA L +++ M L + C+N+ +L G Q+H+ A K +++
Sbjct: 397 -NGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSF 455
Query: 371 VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG 430
NALI MY K + A + F M K+++SW S +A ++ EA + M
Sbjct: 456 ACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNM---- 511
Query: 431 MVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA 490
+ +DV++ +++ A +H + E F M ++ +
Sbjct: 512 LSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHEL----------------------- 548
Query: 491 YNMIRQMNIKPTASLWSAILGACSIYGNTSLGE----LAARNLFDMEPEKSVNYVVLSNI 546
P + + + +LG C G + +G+ +A + M+ E V ++S +
Sbjct: 549 ----------PNSPILTILLGVCGSLGASKIGQQIHTVAIK--LGMDSELIVANALIS-M 595
Query: 547 YTAAGAWDNARKTRKLMEERSL 568
Y G D +R+ LMEER +
Sbjct: 596 YFKCGCAD-SRRIFDLMEERDI 616
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/408 (20%), Positives = 177/408 (43%), Gaps = 78/408 (19%)
Query: 170 SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
SA + + G + +A +F+ + R+D+++WN+MI G D + L+ ++ M+
Sbjct: 38 SARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMR 97
Query: 230 PDCFTLGSILRASVGGI-ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQ 288
G+IL + G + +++ ++ D + LE + ++I Y + G I A +
Sbjct: 98 T-----GAILLSGYGRLGRVLEARRVFDGM----LERNTVAWNAMISCYVQNGDITMARR 148
Query: 289 LYRSMLKTDI-------------------------------ISCTALISGFARDDNHSKE 317
L+ +M D+ +S T +ISG+ R +NH K
Sbjct: 149 LFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGK- 207
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
A+D+F M + + D L+ + +L++ + A K D +G A+++
Sbjct: 208 AWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILN 267
Query: 378 MYAKSGEIAD-ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV---- 432
+Y++ + D A + F+ M ++N +W+++IA + G AI +Y++ + +
Sbjct: 268 VYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTA 327
Query: 433 -----------------------PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
P V++ +L+ G+ E ELF M + I
Sbjct: 328 LITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTI-- 385
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMN---IKPTASLWSAILGACS 514
++ ++ +A+ G+ E A ++++++ + P+ S ++I ACS
Sbjct: 386 ---SWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACS 430
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/452 (21%), Positives = 166/452 (36%), Gaps = 85/452 (18%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
S+ S+ C + A +H+ + G + N +I Y K ++ AR+ F R
Sbjct: 420 SSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSR 479
Query: 91 MPERNV-------------------------------VSWTAMISGYAQNGYDENALLVF 119
M +++ VSWT +IS YA A+ F
Sbjct: 480 MVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAF 539
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
M N + L C + + G+ I K L V +AL+ +Y KC
Sbjct: 540 KTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKC 599
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G D+ +F+ +E +D+ +WN +I G A G ++ +++ M G+ P+ T +L
Sbjct: 600 G-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLL 658
Query: 240 RA-SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
A S G+ + GL + ++D+ + G ++ A Q
Sbjct: 659 NACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQ---------- 708
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
DM ++ D VI +L C + +G++
Sbjct: 709 ----------------------FIYDMPIEP---DTVIWSALLGACKIHKNAEIGKRAAE 743
Query: 359 FAFKYQSSYDAAVGNALIDMYAKS---GEIADANRAFDEMG--DKNVISWT-------SL 406
F+ + S +A L ++Y+ GE+A+ + + G + SWT S
Sbjct: 744 KLFRIEPS-NAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSF 802
Query: 407 IAGYAKHGYGHEAI----ELYKKMKHEGMVPN 434
+ G +H E + ELY +K G VP+
Sbjct: 803 VTGDKQHEQIEEIVATLEELYTLLKATGYVPD 834
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 81/187 (43%), Gaps = 19/187 (10%)
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
+A I + G + +A FD M +++I+W S+I+ Y +G A +LY + M
Sbjct: 38 SARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMR 97
Query: 433 PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYN 492
+ LL G E +F M+ + + ++ ++ + + G + A
Sbjct: 98 TGAI----LLSGYGRLGRVLEARRVFDGMLERNTVA-----WNAMISCYVQNGDITMARR 148
Query: 493 MIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKS-VNYVVL----SNIY 547
+ M + +S S + G C SL + ARNLF+ PE++ V++ V+ I
Sbjct: 149 LFDAMPSRDVSSWNSMLTGYCH-----SLQMVDARNLFEKMPERNLVSWTVMISGYGRIE 203
Query: 548 TAAGAWD 554
AWD
Sbjct: 204 NHGKAWD 210
>gi|147765322|emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]
Length = 625
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 183/566 (32%), Positives = 315/566 (55%), Gaps = 12/566 (2%)
Query: 28 LDPS-TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
DPS + L F + K+ + H+ I++ G N L+TK+I YA +R
Sbjct: 20 FDPSLALLQSLHFSVTHKSLKLTRQSHSRILSLGLSQNSFLATKLIFAYAICQHPYHSRL 79
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FD + +NV W ++I+G +N A +F+ M S V + FT S+ + + +
Sbjct: 80 VFDSLQHKNVFLWNSLINGCVKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGA 139
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
L G+ I G + FV + V ++++ +Y KCG +++ +F+ + ++ SWN +I G
Sbjct: 140 LFSGKSIHGKSIRTGFVSDTVVANSIMSMYCKCGNFDESRKVFDEMTIRNSGSWNVLIAG 199
Query: 207 LAMQG---FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS-QIHDLIIK-- 260
A+ G F ++++ + M ++PD +T+ S+L G + ++H I+K
Sbjct: 200 YAVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLPLCDGDMGKWDYGRELHCYIVKNE 259
Query: 261 --LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEA 318
LGL+S L LID+Y++ + +++ M ++ S TA+I+G+ ++ S EA
Sbjct: 260 LVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYV-ENGDSDEA 318
Query: 319 FDLFKDM-ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
LF+DM ++ + + V L +L C++ + L GRQIH FA + + + + ++ NALID
Sbjct: 319 LSLFRDMQVIDGVEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALID 378
Query: 378 MYAKSGEIADANRAF-DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDV 436
MY+K G + A R F D+ K+ ISW+S+I+GY HG G EAI LY KM G+ P+ +
Sbjct: 379 MYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMI 438
Query: 437 TFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQ 496
T + +L AC +GL EG +++ +IN Y I P E +C+VD+ R GQL+ A + I+
Sbjct: 439 TTVGILSACGRSGLVNEGLNIYSSVINDYGIEPTLEICACIVDMLGRAGQLDRALDFIKA 498
Query: 497 MNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNA 556
+ ++P S+W A++ I+G+ + ELA R L +EP+ NYV +SN+Y ++ WD
Sbjct: 499 IPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQLEPKNPSNYVSISNLYASSRRWDAV 558
Query: 557 RKTRKLMEERSLRKNPGYSFLQSSKK 582
+ R++M+++ LRK PG S++ + K
Sbjct: 559 AEVRRMMKDKRLRKVPGCSWISINNK 584
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 205/439 (46%), Gaps = 22/439 (5%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
D L D T +L + + A IH I G+ S+ ++ ++ Y K G+ +
Sbjct: 119 DVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRTGFVSDTVVANSIMSMYCKCGNFDES 178
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNG---YDENALLVFSAMLRSGVRANQFTYSSALRAC 141
RK FD M RN SW +I+GYA +G + E M VR + +T SS L C
Sbjct: 179 RKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLPLC 238
Query: 142 -ARMRWLQGGRMIQGSIQKGRFV----ENLFVKSALLDLYAKCGWIEDAWILFERIERKD 196
M GR + I K V ++ + L+D+Y++ + +F+R++ ++
Sbjct: 239 DGDMGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRN 298
Query: 197 VVSWNAMIGGLAMQGFNDDSFWLFRSM-MRQGMKPDCFTLGSILRASVGGIELMKISQIH 255
V SW AMI G G +D++ LFR M + G++P+ +L S+L A L+ QIH
Sbjct: 299 VFSWTAMINGYVENGDSDEALSLFRDMQVIDGVEPNRVSLVSVLPACSSFSGLLSGRQIH 358
Query: 256 DLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR-SMLKTDIISCTALISGFARDDNH 314
++ L + L +LID+Y+K GS+ SA +++ L D IS +++ISG+
Sbjct: 359 GFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGL-HGK 417
Query: 315 SKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK-YQSSYDAAVGN 373
+EA L+ M+ + D + +L+ C +N G I++ Y +
Sbjct: 418 GQEAILLYDKMLQAGIRPDMITTVGILSACGRSGLVNEGLNIYSSVINDYGIEPTLEICA 477
Query: 374 ALIDMYAKSGEIADANRAFDEMG----DKNVISWTSLIAGYAKHGYGHEAIELYKK--MK 427
++DM ++G++ +RA D + + W +L++ HG E EL + ++
Sbjct: 478 CIVDMLGRAGQL---DRALDFIKAIPVEPGPSVWGALVSCSIIHG-DLEMQELAYRFLIQ 533
Query: 428 HEGMVPNDVTFLSLLFACS 446
E P++ +S L+A S
Sbjct: 534 LEPKNPSNYVSISNLYASS 552
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 163/494 (32%), Positives = 286/494 (57%), Gaps = 3/494 (0%)
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML-RSGVRANQFTYSSALRACA 142
A F E +V++W +M+ + + AL ++ ML RS ++FT+ S L+ CA
Sbjct: 31 AYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
+ + G+++ G + K +L++++ LL++YA CG ++ A LFER+ ++ V W +
Sbjct: 91 LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
MI G +++ L++ M G PD T+ +++ A +L ++H I ++
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
++ L +L+++YAK G +++A Q++ + D+ + +ALI G+ ++ N S EA LF
Sbjct: 211 MKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKN-NRSTEALQLF 269
Query: 323 KDMIL-KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
+++ M ++V + +++ CA + L GR +H + + Q + ++ N+LIDM++K
Sbjct: 270 REVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSK 329
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
G+I A R FD M K++ISW S++ G+A HG G EA+ ++ M+ + P+++TF+ +
Sbjct: 330 CGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGV 389
Query: 442 LFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
L ACSH GL EG +LF ++ Y + ++EH+ C+VDL R G L A IR M ++P
Sbjct: 390 LTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQP 449
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRK 561
++W ++LGAC +Y N LGE AAR L +EP Y++LSNIY W+ +K R+
Sbjct: 450 DGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRE 509
Query: 562 LMEERSLRKNPGYS 575
LM E+ ++K PG S
Sbjct: 510 LMNEKGIQKTPGCS 523
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 195/376 (51%), Gaps = 7/376 (1%)
Query: 15 QALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIF 74
+ L+ S + PD T+ SLL+ C + ++H ++ S+L++ T ++
Sbjct: 68 EMLERSRNVPDRF----TFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNM 123
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
YA GD+ SAR F+RM RN V WT+MISGY +N ALL++ M G ++ T
Sbjct: 124 YAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTM 183
Query: 135 SSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER 194
++ + ACA ++ L G + I++ + SAL+++YAKCG ++ A +F+++
Sbjct: 184 ATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSD 243
Query: 195 KDVVSWNAMIGGLAMQGFNDDSFWLFRSMM-RQGMKPDCFTLGSILRASVGGIELMKISQ 253
KDV +W+A+I G + ++ LFR + M+P+ T+ +++ A +L
Sbjct: 244 KDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRW 303
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN 313
+HD I + S L SLID+++K G I +A +++ SM D+IS ++++GFA
Sbjct: 304 VHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFAL-HG 362
Query: 314 HSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI-HAFAFKYQSSYDAAVG 372
+EA F+ M + D++ +L C++ + G+++ + Y +
Sbjct: 363 LGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHY 422
Query: 373 NALIDMYAKSGEIADA 388
++D+ ++G +A+A
Sbjct: 423 GCMVDLLCRAGLLAEA 438
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 195/605 (32%), Positives = 312/605 (51%), Gaps = 53/605 (8%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ + + C + + +HA + +G+ SN+ + V+ Y K G + A F
Sbjct: 258 DHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMF 317
Query: 89 DRMPERNV---VSWTAMISGYAQNGYDENALLVFSAML-RSGVRANQFTYSSALRACARM 144
D + R + VSW +++S Y AL +F M R + + + + L ACA +
Sbjct: 318 DDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASL 377
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM- 203
GR + G + V+++FV +A++D+YAKCG +E+A +F+R++ KDVVSWNAM
Sbjct: 378 AASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMV 437
Query: 204 ----------------------------------IGGLAMQGFNDDSFWLFRSMMRQGMK 229
I G A +G ++ +FR M G +
Sbjct: 438 TGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSR 497
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIK--LGLESSN------KLTGSLIDVYAKYG 281
P+ TL S+L A V L+ + H IK L L+ + K+ LID+YAK
Sbjct: 498 PNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQ 557
Query: 282 SIRSAYQLYRSMLKTD--IISCTALISGFARDDNHSKEAFDLFKDMIL--KKMGIDDVIL 337
S A +++ S+ D +++ T +I G+A+ + + A LF M K + +D L
Sbjct: 558 STEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGD-ANNALQLFSGMFKMDKSIKPNDFTL 616
Query: 338 CLMLNICANVASLNLGRQIHAFAFK-YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG 396
L CA +A+L GRQ+HA+ + + S V N LIDMY+KSG++ A FD M
Sbjct: 617 SCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMP 676
Query: 397 DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWE 456
+N +SWTSL+ GY HG G +A+ ++ +M+ +VP+ +TFL +L+ACSH+G+ G
Sbjct: 677 QRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGIN 736
Query: 457 LFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIY 516
F M + + P EH++C+VDL+ R G+L A +I +M ++PT +W A+L AC ++
Sbjct: 737 FFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLH 796
Query: 517 GNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSF 576
N LGE AA L ++E +Y +LSNIY A W + + R M+ ++K PG S+
Sbjct: 797 SNVELGEFAANRLLELESGNDGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSW 856
Query: 577 LQSSK 581
+Q K
Sbjct: 857 IQGRK 861
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 134/537 (24%), Positives = 243/537 (45%), Gaps = 61/537 (11%)
Query: 48 QAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER--NVVSWTAMISG 105
A L+H I G HL+T +I Y A +R+P +V W +I
Sbjct: 176 HAKLLHQQSIMQGLL--FHLATNLIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRR 233
Query: 106 YAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVEN 165
G + ++ M G + +T+ +ACA + L G + ++ + F N
Sbjct: 234 ALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASN 293
Query: 166 LFVKSALLDLYAKCGWIEDAWILFERIERK---DVVSWNAMIGGLAMQGFNDDSFWLFRS 222
+FV +A++ +Y KCG + A +F+ + + D+VSWN+++ + + LF
Sbjct: 294 VFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHK 353
Query: 223 M-MRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYG 281
M R M PD +L +IL A ++ Q+H I+ GL + +++D+YAK G
Sbjct: 354 MTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCG 413
Query: 282 SIRSAYQLYRSM-----------------------------------LKTDIISCTALIS 306
+ A ++++ M ++ D+++ TA+I+
Sbjct: 414 KMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVIT 473
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY--- 363
G+A+ EA D+F+ M + V L +L+ C +V +L G++ H +A K+
Sbjct: 474 GYAQ-RGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILN 532
Query: 364 -----QSSYDAAVGNALIDMYAKSGEIADANRAFDEMG--DKNVISWTSLIAGYAKHGYG 416
+ D V N LIDMYAK A + FD + D++V++WT +I GYA+HG
Sbjct: 533 LDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDA 592
Query: 417 HEAIELYKKM--KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF 474
+ A++L+ M + + PND T L AC+ G ++ ++ +
Sbjct: 593 NNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVA 652
Query: 475 SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
+C++D++++ G +++A + M + S W++++ YG GE A R +FD
Sbjct: 653 NCLIDMYSKSGDVDTAQIVFDNMPQRNAVS-WTSLMTG---YGMHGRGEDALR-VFD 704
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 121/239 (50%), Gaps = 22/239 (9%)
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNAL 375
++ F L++ M D + CAN++SL+LG +HA + + + V NA+
Sbjct: 241 RDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAV 300
Query: 376 IDMYAKSGEIADANRAFDEM---GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG-M 431
+ MY K G + A+ FD++ G ++++SW S+++ Y + A+ L+ KM M
Sbjct: 301 VSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLM 360
Query: 432 VPNDVTFLSLLFAC-----SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
P+ ++ +++L AC S G G+ + + +++ + + VVD++A+ G+
Sbjct: 361 SPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFV------GNAVVDMYAKCGK 414
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA-ARNLFDMEPEKSVNYVVLS 544
+E A + ++M K S W+A+ + G + G L A +LF+ E+++ V++
Sbjct: 415 MEEANKVFQRMKFKDVVS-WNAM-----VTGYSQAGRLEHALSLFERMTEENIELDVVT 467
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 169/528 (32%), Positives = 292/528 (55%), Gaps = 2/528 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IH H+I GYE NL + ++ Y K + A + F M ++ V++ ++++GY+ G
Sbjct: 162 IHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGL 221
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+E A+ +F + SG++ + FT+++ L A + + G+ + G + K FV N+FV +A
Sbjct: 222 NEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNA 281
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
LLD Y+K +++ LF + D +S+N +I A G +SF LFR +
Sbjct: 282 LLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRR 341
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
F ++L + + L QIH I +G +++ +L+D+YAK + A +++
Sbjct: 342 QFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFD 401
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
++ + TA+IS + + H +E ++F DM + D +L CAN+AS++
Sbjct: 402 NIACKSTVPWTAMISAYVQKGKH-EEGINVFSDMRRTGVPADQATFASILRACANLASIS 460
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
LGRQ+H+ + + G+AL+D YAK G + DA ++F EM ++N +SW +LI+ YA
Sbjct: 461 LGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYA 520
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
++G + +++M G P+ V+FLS+L ACSH G E F M Y + P+
Sbjct: 521 QNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKR 580
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
EH++ +VD+ R G+ + A ++ +M +P+ +WS++L +C I+ N L + AA LF+
Sbjct: 581 EHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFN 640
Query: 532 MEP-EKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
ME + Y+ +SNIY AG WDN K +K M +R +RK P YS+++
Sbjct: 641 MEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVE 688
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 152/577 (26%), Positives = 276/577 (47%), Gaps = 45/577 (7%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIF-YAKVGDVLSA 84
T +P+T S F ++ ER L+HAH + + + +S ++I + K G + A
Sbjct: 37 TGFNPNTCRS--NFQVNNFLER-GDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKA 93
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
R+ FD M ER VSWT +I GY Q+ + A +++ M R G+ + T + L +
Sbjct: 94 RELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGEL 153
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
I + K + NL V ++L+D Y K + A LF+ + KD V++N+++
Sbjct: 154 ETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLM 213
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G + +G N+++ LF + G+KP FT ++L A+VG + Q+H ++K
Sbjct: 214 TGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFV 273
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ + +L+D Y+K+ + +L+ M + D IS +I+ +A + KE+FDLF+
Sbjct: 274 WNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAW-NGQFKESFDLFRK 332
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
+ + +L+I + +L +GRQIH A +++++ V NAL+DMYAK
Sbjct: 333 LQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNG 392
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+A + FD + K+ + WT++I+ Y + G E I ++ M+ G+ + TF S+L A
Sbjct: 393 DKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRA 452
Query: 445 CSHTGLTCEGWEL----------------------------FTDMINKYRILPRAEHFS- 475
C++ G +L TD I + +P S
Sbjct: 453 CANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSW 512
Query: 476 -CVVDLFARRGQLESAYNMIRQM---NIKPTASLWSAILGACSIYG--NTSLGEL-AARN 528
++ +A+ G ++ N +QM KP + + ++L ACS G +L +
Sbjct: 513 NALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQ 572
Query: 529 LFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
++++ P++ +Y + ++ G +D A KLM E
Sbjct: 573 IYEVTPKRE-HYTSMVDVLCRNGRFDEA---EKLMTE 605
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 94/254 (37%), Gaps = 74/254 (29%)
Query: 339 LMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK 398
++ N A SLN I A K + + N ++ + + G++ A++ FD+M K
Sbjct: 13 VLRNSPAPKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAK 72
Query: 399 NVI-------------------------------SWTSLIAGYAKHGYGHEAIELYKKMK 427
N I SWT LI GY + EA LY M+
Sbjct: 73 NTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMR 132
Query: 428 HEGMVPNDVTFLSLLFACS-----------HTGLTCEGWE-------------------- 456
G+ P+ VT ++LL HT + G+E
Sbjct: 133 RGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLY 192
Query: 457 ----LFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMN---IKPTASLWSAI 509
LF M+NK + F+ ++ ++ G E A + +++ IKP+ ++A+
Sbjct: 193 LASQLFKHMLNKDTVT-----FNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAAL 247
Query: 510 LGACSIYGNTSLGE 523
L A +T G+
Sbjct: 248 LSAAVGLDDTKFGQ 261
>gi|356536685|ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Glycine max]
Length = 723
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 180/580 (31%), Positives = 316/580 (54%), Gaps = 40/580 (6%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
SLL C K+ Q +HA +I+ G + N L ++++ FY V ++ A+ +
Sbjct: 86 SLLLACTHFKSLSQGKQLHAQVISLGLDQNPILVSRLVNFYTNVNLLVDAQFVTESSNTL 145
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
+ + W +IS Y +NG+ AL V+ ML + +++TY S L+AC G +
Sbjct: 146 DPLHWNLLISAYVRNGFFVEALCVYKNMLNKKIEPDEYTYPSVLKACGESLDFNSGLEVH 205
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND 214
SI+ +LFV +AL+ +Y + G +E A LF+ + R+D VSWN +I A +G
Sbjct: 206 RSIEASSMEWSLFVHNALVSMYGRFGKLEIARHLFDNMPRRDSVSWNTIISCYASRGIWK 265
Query: 215 DSFWLFRSMMRQGMKPDCFTLGSI-------------------LRASV------------ 243
++F LF SM +G++ + +I +R S+
Sbjct: 266 EAFQLFGSMQEEGVEMNVIIWNTIAGGCLHSGNFRGALQLISQMRTSIHLDAIAMVVGLN 325
Query: 244 -----GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
G I+L K +IH ++ + + + +LI +Y++ + A+ L+ + +
Sbjct: 326 ACSHIGAIKLGK--EIHGHAVRTCFDVFDNVKNALITMYSRCRDLGHAFILFHRTEEKGL 383
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
I+ A++SG+A D + + F LF++M+ + M + V + +L +CA +A+L G++ H
Sbjct: 384 ITWNAMLSGYAHMDRYEEVTF-LFREMLQEGMEPNYVTIASVLPLCARIANLQHGKEFHC 442
Query: 359 FAFKYQSSYD-AAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
+ K++ + + NAL+DMY++SG + +A + FD + ++ +++TS+I GY G G
Sbjct: 443 YIMKHKQFEEYLLLWNALVDMYSRSGRVLEARKVFDSLTKRDEVTYTSMILGYGMKGEGE 502
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
++L+++M + P+ VT +++L ACSH+GL +G LF MI+ + I+PR EH++C+
Sbjct: 503 TTLKLFEEMCKLEIKPDHVTMVAVLTACSHSGLVAQGQVLFKRMIDVHGIVPRLEHYACM 562
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKS 537
DLF R G L A I M KPT+++W+ +LGAC I+GNT +GE AA L +M+P+ S
Sbjct: 563 ADLFGRAGLLNKAKEFITGMPYKPTSAMWATLLGACRIHGNTEMGEWAAGKLLEMKPDHS 622
Query: 538 VNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
YV+++N+Y AAG+W + R M +RK PG +++
Sbjct: 623 GYYVLIANMYAAAGSWRKLAEVRTYMRNLGVRKAPGCAWV 662
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 190/427 (44%), Gaps = 46/427 (10%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY S+L+ C + +H I + E +L + ++ Y + G + AR F
Sbjct: 181 DEYTYPSVLKACGESLDFNSGLEVHRSIEASSMEWSLFVHNALVSMYGRFGKLEIARHLF 240
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSS------------ 136
D MP R+ VSW +IS YA G + A +F +M GV N +++
Sbjct: 241 DNMPRRDSVSWNTIISCYASRGIWKEAFQLFGSMQEEGVEMNVIIWNTIAGGCLHSGNFR 300
Query: 137 ----------------------ALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLD 174
L AC+ + ++ G+ I G + F VK+AL+
Sbjct: 301 GALQLISQMRTSIHLDAIAMVVGLNACSHIGAIKLGKEIHGHAVRTCFDVFDNVKNALIT 360
Query: 175 LYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFT 234
+Y++C + A+ILF R E K +++WNAM+ G A ++ +LFR M+++GM+P+ T
Sbjct: 361 MYSRCRDLGHAFILFHRTEEKGLITWNAMLSGYAHMDRYEEVTFLFREMLQEGMEPNYVT 420
Query: 235 LGSILRASVGGIELMKISQIHDLIIKLG-LESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ S+L L + H I+K E L +L+D+Y++ G + A +++ S+
Sbjct: 421 IASVLPLCARIANLQHGKEFHCYIMKHKQFEEYLLLWNALVDMYSRSGRVLEARKVFDSL 480
Query: 294 LKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG 353
K D ++ T++I G+ + LF++M ++ D V + +L C++ + G
Sbjct: 481 TKRDEVTYTSMILGYGM-KGEGETTLKLFEEMCKLEIKPDHVTMVAVLTACSHSGLVAQG 539
Query: 354 RQIHAFAFKYQSSYDAAVGN-----ALIDMYAKSGEIADANRAFDEMGDKNVIS-WTSLI 407
+ + FK V + D++ ++G + A M K + W +L+
Sbjct: 540 QVL----FKRMIDVHGIVPRLEHYACMADLFGRAGLLNKAKEFITGMPYKPTSAMWATLL 595
Query: 408 AGYAKHG 414
HG
Sbjct: 596 GACRIHG 602
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 134/274 (48%), Gaps = 14/274 (5%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD + L C A + IH H + ++ ++ +I Y++ D+ A
Sbjct: 315 LDAIAMVVGLNACSHIGAIKLGKEIHGHAVRTCFDVFDNVKNALITMYSRCRDLGHAFIL 374
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F R E+ +++W AM+SGYA E +F ML+ G+ N T +S L CAR+ L
Sbjct: 375 FHRTEEKGLITWNAMLSGYAHMDRYEEVTFLFREMLQEGMEPNYVTIASVLPLCARIANL 434
Query: 148 QGGRMIQGSIQKGR-FVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
Q G+ I K + F E L + +AL+D+Y++ G + +A +F+ + ++D V++ +MI G
Sbjct: 435 QHGKEFHCYIMKHKQFEEYLLLWNALVDMYSRSGRVLEARKVFDSLTKRDEVTYTSMILG 494
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-------SVGGIELMKISQIHDLII 259
M+G + + LF M + +KPD T+ ++L A + G + ++ +H ++
Sbjct: 495 YGMKGEGETTLKLFEEMCKLEIKPDHVTMVAVLTACSHSGLVAQGQVLFKRMIDVHGIVP 554
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+L + + D++ + G + A + M
Sbjct: 555 RL------EHYACMADLFGRAGLLNKAKEFITGM 582
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 1/215 (0%)
Query: 235 LGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML 294
+GS+L A L + Q+H +I LGL+ + L L++ Y + A + S
Sbjct: 84 IGSLLLACTHFKSLSQGKQLHAQVISLGLDQNPILVSRLVNFYTNVNLLVDAQFVTESSN 143
Query: 295 KTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGR 354
D + LIS + R + EA ++K+M+ KK+ D+ +L C N G
Sbjct: 144 TLDPLHWNLLISAYVR-NGFFVEALCVYKNMLNKKIEPDEYTYPSVLKACGESLDFNSGL 202
Query: 355 QIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG 414
++H + V NAL+ MY + G++ A FD M ++ +SW ++I+ YA G
Sbjct: 203 EVHRSIEASSMEWSLFVHNALVSMYGRFGKLEIARHLFDNMPRRDSVSWNTIISCYASRG 262
Query: 415 YGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
EA +L+ M+ EG+ N + + ++ C H+G
Sbjct: 263 IWKEAFQLFGSMQEEGVEMNVIIWNTIAGGCLHSG 297
>gi|357481301|ref|XP_003610936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512271|gb|AES93894.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 812
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 188/596 (31%), Positives = 325/596 (54%), Gaps = 43/596 (7%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
D + P + LL C + K+ Q IHAHII+ G N L +K+I FYA V + A
Sbjct: 89 DIIFQPIKH--LLLGCTNLKSLSQGKQIHAHIISLGIHQNPILVSKLINFYASVDLLADA 146
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
+ + + + W +IS Y +N E+A+ V+ ML GV + +TY S L+AC +
Sbjct: 147 QIVAECSNSFDPLHWNMVISLYVKNCLFEDAISVYRRMLSKGVIPDDYTYPSVLKACGEL 206
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
G + +IQ+ +LFV +AL+ +Y + G +E A LF+ + +D VSWN MI
Sbjct: 207 LDYDSGVAVHKAIQESSIKWSLFVHNALVFMYGRFGKLEVARELFDIMPARDDVSWNTMI 266
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPD----------CFTLG---------SILRA---- 241
A +G D++F LF M G++ + C G S +RA
Sbjct: 267 SCYASRGLWDEAFRLFGCMREAGIERNIIIWNTIAGGCLHTGNFKGALKLFSQMRAVIQL 326
Query: 242 -------------SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQ 288
+G ++L K +IH ++ + + + +LI +Y++ + AY
Sbjct: 327 DSVAMVVGLNACSHIGAVKLGK--EIHGHAVRTCFDVFDNVKNTLITMYSRCRDLNHAYL 384
Query: 289 LYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
L+R + + +I+ A++SGFA D + +F L ++M+ + + + V + +L +CA +A
Sbjct: 385 LFRKIDEKGLITWNAMLSGFAHMDRSEEVSF-LLREMLREGVEPNYVTIASILPLCARIA 443
Query: 349 SLNLGRQIHAFAFKYQSSYDA--AVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
+L G++ H + K + + + N+L++MY++SG++ +A + FD + K+ +++TS+
Sbjct: 444 NLQHGKEFHCYMVKREEQFKGYLLLWNSLVEMYSRSGKVLEARKVFDSLSRKDEVTYTSM 503
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYR 466
I GY G G A++L+ +M+ + P+ VT +++L ACSH+GL +G LF MI Y
Sbjct: 504 IMGYGVSGDGETALKLFAEMRRLNIKPDHVTMVAVLIACSHSGLVAQGQVLFRKMIEVYG 563
Query: 467 ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAA 526
I PR EH+SC+VDLF R G L+ A +I M+ KPT+++W+ ++GAC I+GNT +GE AA
Sbjct: 564 IDPRVEHYSCMVDLFGRAGLLDKAKEVITGMSCKPTSAIWATLIGACKIHGNTVIGEWAA 623
Query: 527 RNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
L +M+P+ S Y++++N+Y AA D + R M + ++ PG +++ ++
Sbjct: 624 GKLLEMKPDHSGYYLLIANMYAAANRLDKEAEARTYMRDSGAKRTPGCAWVDVGRE 679
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 139/290 (47%), Gaps = 4/290 (1%)
Query: 8 FKTGQLKQALK-FSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
TG K ALK FS LD + L C A + IH H + ++ +
Sbjct: 305 LHTGNFKGALKLFSQMRAVIQLDSVAMVVGLNACSHIGAVKLGKEIHGHAVRTCFDVFDN 364
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ +I Y++ D+ A F ++ E+ +++W AM+SG+A E + MLR G
Sbjct: 365 VKNTLITMYSRCRDLNHAYLLFRKIDEKGLITWNAMLSGFAHMDRSEEVSFLLREMLREG 424
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQK--GRFVENLFVKSALLDLYAKCGWIED 184
V N T +S L CAR+ LQ G+ + K +F L + ++L+++Y++ G + +
Sbjct: 425 VEPNYVTIASILPLCARIANLQHGKEFHCYMVKREEQFKGYLLLWNSLVEMYSRSGKVLE 484
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SV 243
A +F+ + RKD V++ +MI G + G + + LF M R +KPD T+ ++L A S
Sbjct: 485 ARKVFDSLSRKDEVTYTSMIMGYGVSGDGETALKLFAEMRRLNIKPDHVTMVAVLIACSH 544
Query: 244 GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
G+ +I G++ + ++D++ + G + A ++ M
Sbjct: 545 SGLVAQGQVLFRKMIEVYGIDPRVEHYSCMVDLFGRAGLLDKAKEVITGM 594
>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Brachypodium distachyon]
Length = 796
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 186/591 (31%), Positives = 318/591 (53%), Gaps = 20/591 (3%)
Query: 3 IVRANFKTGQLKQALKFSLSC---PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
++ A + GQ +++L+ L + D TY + L C ++ ++HA +
Sbjct: 84 LIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVVHALAVLE 143
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G + +S ++ YA+ GD+ AR+ FD ER+ VSW +++SGY + G E L VF
Sbjct: 144 GLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVF 203
Query: 120 SAMLRSGVRANQFTYSSALRACA----RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDL 175
+ M R + N F S ++ C+ +R + + G + K +LF+ SA++D+
Sbjct: 204 ALMRRCAMGLNSFALGSVIKCCSGGDGSVRGI--AEAVHGCVVKAGLDTDLFLASAMVDM 261
Query: 176 YAKCGWIEDAWILFERIERKDVVSWNAMIGGLA------MQGFNDDSFWLFRSMMRQGMK 229
YAK G + +A LF+ + +VV +NAMI GL + ++ L+ + +GM+
Sbjct: 262 YAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGME 321
Query: 230 PDCFTLGSILRAS--VGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
P FT S++RA G IE K QIH ++K + + + +LID+Y + +
Sbjct: 322 PTEFTFSSVIRACNLAGDIEFGK--QIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGF 379
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
+ +RS+ K D+++ TA+ISG +++ + A LF +++ + D + ++N CA++
Sbjct: 380 RCFRSVPKQDVVTWTAMISGCVQNELFER-ALALFHELLGVGLKPDPFTISSVMNACASL 438
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI 407
A + G Q+ FA K A+GN+ I MYA+SG + A + F EM +V+SW+++I
Sbjct: 439 AVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAII 498
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRI 467
+ +A+HG +A++ + +M +VPN++TFL +L ACSH GL EG + M +Y +
Sbjct: 499 SSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGL 558
Query: 468 LPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAAR 527
P +H +CVVDL R G+L A IR +W ++LG+C I+ + G+L A
Sbjct: 559 CPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLGSCRIHRDMERGQLVAD 618
Query: 528 NLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+ +++P S YV L N+Y AG K R LM+ER ++K PG S+++
Sbjct: 619 RIMELQPASSGCYVNLYNMYLDAGELSLGSKIRDLMKERGVKKEPGLSWIE 669
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 140/491 (28%), Positives = 255/491 (51%), Gaps = 34/491 (6%)
Query: 48 QAHLIHAHIITNGYESNLHLSTKVIIFYAKVG--DVLSARKAFDRMPERNVVSWTAMISG 105
QA +H HI +L L ++ Y ++G D AR+ D MP RN VS+ +I
Sbjct: 28 QAAAVHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRRNAVSFNLLIDA 87
Query: 106 YAQNGYDENALLVFSAMLRSG-VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVE 164
Y++ G E +L F R+ V+A++FTY++AL AC+R L+ G+++ E
Sbjct: 88 YSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVVHALAVLEGLAE 147
Query: 165 NLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMM 224
+FV ++L+ +YA+CG + +A +F+ E +D VSWN+++ G G +++ +F M
Sbjct: 148 GVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALMR 207
Query: 225 RQGMKPDCFTLGSILRASVGGIELMK--ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGS 282
R M + F LGS+++ GG ++ +H ++K GL++ L +++D+YAK G+
Sbjct: 208 RCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGA 267
Query: 283 IRSAYQLYRSMLKTDIISCTALISGFARDDN--HS---KEAFDLFKDMILKKMGIDDVIL 337
+ A L++S+L +++ A+I+G RD+ H +EA L+ ++ + M +
Sbjct: 268 LSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGMEPTEFTF 327
Query: 338 CLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD 397
++ C + G+QIH K+ D +G+ALID+Y S + D R F +
Sbjct: 328 SSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPK 387
Query: 398 KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL------- 450
++V++WT++I+G ++ A+ L+ ++ G+ P+ T S++ AC+ +
Sbjct: 388 QDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTGEQM 447
Query: 451 ----TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
T G++ FT M N SC + ++AR G +E+A ++M S W
Sbjct: 448 QCFATKSGFDRFTAMGN-----------SC-IHMYARSGNVEAAIQRFQEMESHDVVS-W 494
Query: 507 SAILGACSIYG 517
SAI+ + + +G
Sbjct: 495 SAIISSHAQHG 505
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 178/531 (33%), Positives = 291/531 (54%), Gaps = 17/531 (3%)
Query: 56 IITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENA 115
I T + +++ + +I +A+ GD+++ARK F+ + ER VV WT MI+ Y Q G A
Sbjct: 174 IKTGFWGTDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKA 233
Query: 116 LLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDL 175
+ +F ML G + +T SS + ACA G+ + + + V + V L+D+
Sbjct: 234 VELFLGMLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDM 293
Query: 176 YAKCGW---IEDAWILFERIERKDVVSWNAMIGG-LAMQGFNDDSFWLFRSMMRQGMKPD 231
Y K +E A +F+R+ +V+SW A+I G + G +++ L M+ + ++P+
Sbjct: 294 YTKLQMEQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPN 353
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
T S+L+A + QIH ++K + + N + +L+ +YA+ G + A + +
Sbjct: 354 HLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFD 413
Query: 292 SMLKTDIISCTALISGFARDD---NHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
+ + +++S ++ I R + + E+ D+ G+ +L+ A V
Sbjct: 414 QLYERNLLSTSSDIGETGRSNASWSSQIESMDV---------GVSTFTFASLLSAAATVG 464
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEM-GDKNVISWTSLI 407
G+Q+HA + K D + N+L+ MY++ G + DA RAFDEM D NVISWTS+I
Sbjct: 465 LPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSII 524
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRI 467
+ AKHG+ A+ L+ M G+ PNDVT++++L ACSH GL EG E F M +R+
Sbjct: 525 SALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRL 584
Query: 468 LPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAAR 527
+PR EH++C+VDL AR G ++ A I +M K A +W +LGAC Y N +GE+AAR
Sbjct: 585 IPRMEHYACMVDLLARSGLVQEALEFINEMPCKADALVWKTLLGACRTYENIEIGEIAAR 644
Query: 528 NLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
++ D+EP+ YV+LSN+Y G WD + R LM R+L K G S++
Sbjct: 645 HVIDLEPQDPAPYVLLSNLYAHGGLWDEVARIRSLMRHRNLSKETGLSWMH 695
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 134/458 (29%), Positives = 235/458 (51%), Gaps = 12/458 (2%)
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPE-RNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
++ ++ Y+K G V +AR+ FD M R++VSWTAM +NG ++ AL++ ML S
Sbjct: 81 VANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGEMLES 140
Query: 126 GVRANQFTYSSALRAC--ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIE 183
G+R N FT +A AC + GG ++ +I+ G + ++ V AL+D++A+ G +
Sbjct: 141 GLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMFARNGDLV 200
Query: 184 DAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV 243
A +F + + VV W MI G + LF M+ G +PD +T+ S++ A
Sbjct: 201 AARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSACA 260
Query: 244 GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKY---GSIRSAYQLYRSMLKTDIIS 300
Q+H L+++LGL S ++ L+D+Y K S+ A ++++ M +++S
Sbjct: 261 EQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNVMS 320
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
TALISG+ + A +L +M+ + + + + +L CAN++ + GRQIHA
Sbjct: 321 WTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARV 380
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
K VGNAL+ MYA+SG + +A +AFD++ ++N++S +S I G
Sbjct: 381 MKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIG-----ETGRSNA 435
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDL 480
+++ + + TF SLL A + GL +G +L I K + +V +
Sbjct: 436 SWSSQIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSI-KTGFESDKGISNSLVSM 494
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
++R G L+ A +M W++I+ A + +G+
Sbjct: 495 YSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGH 532
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 133/459 (28%), Positives = 223/459 (48%), Gaps = 32/459 (6%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKV---GDVLSAR 85
D T S++ C ++ + +H+ ++ G S+ +S ++ Y K+ + AR
Sbjct: 248 DGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECAR 307
Query: 86 KAFDRMPERNVVSWTAMISGYAQ-NGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
K F RMP NV+SWTA+ISGY Q G + NA+ + ML + N TYSS L+ACA +
Sbjct: 308 KVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANL 367
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
GR I + K V +AL+ +YA+ G +E+A F+++ ++++S ++ I
Sbjct: 368 SDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDI 427
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G G ++ S+ M G+ FT S+L A+ K Q+H L IK G E
Sbjct: 428 G---ETGRSNASWSSQIESMDVGVST--FTFASLLSAAATVGLPTKGQQLHALSIKTGFE 482
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT-DIISCTALISGFARDDNHSKEAFDLFK 323
S ++ SL+ +Y++ G + A + + M ++IS T++IS A+ H++ A LF
Sbjct: 483 SDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAK-HGHAERALSLFH 541
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNA-LIDMYAKS 382
DMIL + +DV +L+ C++V + G++ K A ++D+ A+S
Sbjct: 542 DMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARS 601
Query: 383 GEIADANRAFDEMGDK-NVISWTSLIAGYAKHGYGHEAIELYK-KMKH----EGMVPNDV 436
G + +A +EM K + + W +L+ +E IE+ + +H E P
Sbjct: 602 GLVQEALEFINEMPCKADALVWKTLLGACRT----YENIEIGEIAARHVIDLEPQDPAPY 657
Query: 437 TFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFS 475
LS L+A H GL W D + + R L R + S
Sbjct: 658 VLLSNLYA--HGGL----W----DEVARIRSLMRHRNLS 686
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 105/200 (52%), Gaps = 3/200 (1%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLS 68
+TG+ + + D + T+ SLL + +HA I G+ES+ +S
Sbjct: 429 ETGRSNASWSSQIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGIS 488
Query: 69 TKVIIFYAKVGDVLSARKAFDRMP-ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV 127
++ Y++ G + A +AFD M + NV+SWT++IS A++G+ E AL +F M+ SGV
Sbjct: 489 NSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGV 548
Query: 128 RANQFTYSSALRACARMRWLQGGRMIQGSIQKG-RFVENLFVKSALLDLYAKCGWIEDAW 186
+ N TY + L AC+ + ++ G+ S+QK R + + + ++DL A+ G +++A
Sbjct: 549 KPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEAL 608
Query: 187 ILFERIERK-DVVSWNAMIG 205
+ K D + W ++G
Sbjct: 609 EFINEMPCKADALVWKTLLG 628
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 146/294 (49%), Gaps = 23/294 (7%)
Query: 11 GQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLS 68
GQ A++ + ++P+ TY SLL+ C + + IHA ++ + +
Sbjct: 333 GQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVG 392
Query: 69 TKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS-GV 127
++ YA+ G + ARKAFD++ ERN++S ++ I ++ +S+ + S V
Sbjct: 393 NALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIGETGRSNAS------WSSQIESMDV 446
Query: 128 RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWI 187
+ FT++S L A A + G+ + K F + + ++L+ +Y++CG+++DA
Sbjct: 447 GVSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACR 506
Query: 188 LFERIE-RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS--VG 244
F+ +E +V+SW ++I LA G + + LF M+ G+KP+ T ++L A VG
Sbjct: 507 AFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVG 566
Query: 245 GIELMK-----ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
++ K + + H LI ++ + ++D+ A+ G ++ A + M
Sbjct: 567 LVKEGKEYFRSMQKDHRLIPRM------EHYACMVDLLARSGLVQEALEFINEM 614
>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 815
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 170/548 (31%), Positives = 309/548 (56%), Gaps = 4/548 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T ++L+ C++ + +HA +I G E++ L++ ++ Y++ A + F R+
Sbjct: 254 TLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRI 313
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
E +VV +AMIS + ++ AL +F M GV+ N + + +R R
Sbjct: 314 DEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCR 373
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ I K F V A+L++Y K G ++DA + F+ I D SWN ++
Sbjct: 374 SVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGS 433
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
+ +F+ M +G + +T S+LR + L +Q+H I+K GL++ ++
Sbjct: 434 NCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSR 493
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
L+D+YA+ G SA ++ + + D S T ++SG+A+ + +++ + F+ M+ + +
Sbjct: 494 MLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEE-AEKVVEYFRSMLRENIR 552
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAV-GNALIDMYAKSGEIADANR 390
D L + L++C+++ASL G Q+H++A K S ++++V AL+DMY K G IADA
Sbjct: 553 PSDATLAVSLSVCSDMASLGSGLQLHSWAIK--SGWNSSVVSGALVDMYVKCGNIADAEM 610
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
F E ++ ++W ++I GY++HG+G++A++ +K+M EG P+ +TF+ +L ACSH GL
Sbjct: 611 LFHESETRDQVAWNTIICGYSQHGHGYKALDAFKQMVDEGKRPDGITFVGVLSACSHAGL 670
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
EG + F + + Y I P EH++C+VD+ ++ G+L A ++I QM + P +S+W IL
Sbjct: 671 LNEGRKYFKSLSSIYGITPTMEHYACMVDILSKAGRLVEAESLINQMPLAPDSSIWRTIL 730
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
GAC I+ N + E AA LF++EP + + ++LSNIY G W + + R ++ + ++K
Sbjct: 731 GACRIHRNIEIAERAAERLFELEPHDASSSILLSNIYADLGRWSDVTRVRNILLDHGVKK 790
Query: 571 NPGYSFLQ 578
PG S+++
Sbjct: 791 EPGCSWIE 798
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/503 (27%), Positives = 251/503 (49%), Gaps = 30/503 (5%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
+ + LQ C ++ R+ +HA ++ + + L ++ Y K G ++ AR+ FD MP
Sbjct: 53 HAAALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMP 112
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
R++V+WTAMIS + G + AL +F+ M + G+ N FT +S L+AC+ +
Sbjct: 113 HRDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQ 172
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF 212
+ G + K +++ +V S+L++ Y CG ++ A + + + VSWNA++ G A G
Sbjct: 173 VHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGD 232
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKLTG 271
+ ++ G + +TL ++L+ + + L K Q +H +IK GLE+ N L
Sbjct: 233 YRRVMIIIEKLVASGDEISKYTLPTVLKCCM-ELGLAKYGQSVHASVIKRGLETDNVLNS 291
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
L+++Y++ S AY+++ + + D++ C+A+IS F R D + EA DLF M +
Sbjct: 292 CLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDM-AWEALDLFVKMSGMGVK 350
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
+ I + + + NL R +HA+ K + VG+A+++MY K G + DA
Sbjct: 351 PNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVT 410
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS----- 446
FD + + + SW ++++ + + + ++K+M EG N T++S+L C+
Sbjct: 411 FDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNL 470
Query: 447 ------HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIK 500
H + G + TD+ R+L VD++A+ G SA + Q+ +
Sbjct: 471 RFGTQVHACILKSGLQNDTDV---SRML---------VDMYAQSGCFTSACLVFEQLKER 518
Query: 501 PTASLWSAILGACSIYGNTSLGE 523
S W+ I+ S Y T E
Sbjct: 519 DAFS-WTVIM---SGYAKTEEAE 537
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 129/565 (22%), Positives = 260/565 (46%), Gaps = 19/565 (3%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNG 60
++ A+ G QAL + P+ T S+L+ C + H +H ++
Sbjct: 122 MISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKLN 181
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+ ++ + ++ Y G++ +A +PER+ VSW A+++GYA++G +++
Sbjct: 182 GLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIE 241
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
++ SG +++T + L+ C + + G+ + S+ K + + S L+++Y++C
Sbjct: 242 KLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCL 301
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI-- 238
E+A+ +F RI+ DVV +AMI ++ LF M G+KP+ + I
Sbjct: 302 SAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAG 361
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
+ + G L + +H I+K G + +++++Y K G+++ A + + + D
Sbjct: 362 VASRTGDANLCR--SVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDT 419
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
S ++S F N ++ +FK M + + +L C ++ +L G Q+HA
Sbjct: 420 FSWNTILSAFYSGSN-CEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHA 478
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHE 418
K D V L+DMYA+SG A F+++ +++ SWT +++GYAK +
Sbjct: 479 CILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEK 538
Query: 419 AIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMIN---KYRILPRAEHFS 475
+E ++ M E + P+D T L CS G +L + I ++ A
Sbjct: 539 VVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSGWNSSVVSGA---- 594
Query: 476 CVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD--ME 533
+VD++ + G + A + + + + W+ I+ S +G+ A + + D
Sbjct: 595 -LVDMYVKCGNIADAEMLFHESETRDQVA-WNTIICGYSQHGHGYKALDAFKQMVDEGKR 652
Query: 534 PEKSVNYVVLSNIYTAAGAWDNARK 558
P+ + +V + + + AG + RK
Sbjct: 653 PD-GITFVGVLSACSHAGLLNEGRK 676
>gi|224145066|ref|XP_002325515.1| predicted protein [Populus trichocarpa]
gi|222862390|gb|EEE99896.1| predicted protein [Populus trichocarpa]
Length = 683
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 191/580 (32%), Positives = 308/580 (53%), Gaps = 38/580 (6%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
SLL C + K+ Q +HAH I+ G+E++L L K++ FY+ + A
Sbjct: 46 SLLYSCTNLKSLPQGKQLHAHTISLGFENHLVLVPKLVTFYSSFSLLADAHTITVNSDIV 105
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
N + W +IS Y NG AL + M+ GVR + FTY S L+AC L GR +
Sbjct: 106 NPLPWNLLISSYVNNGLHGEALSAYREMVHKGVRPDNFTYPSVLKACGEKLDLDFGREVH 165
Query: 155 GSIQKGRFVE-NLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN 213
SI NL+V ++L+ +Y K G ++ A LF ++ +D VSWN +I A +G
Sbjct: 166 ESINAAYGHRWNLYVHNSLVSMYGKFGELDAARRLFNQMPERDAVSWNGIISNYASRGLW 225
Query: 214 DDSFWLFRSMMRQGMKPDCFTLGSILRASV------GGIELM-----------KISQI-- 254
++F LF M G + + T +I V G +EL+ ++ I
Sbjct: 226 KEAFELFEEMRLAGAEVNIITWNTIAGGCVQTRNFKGALELLSQMRRCDIDLDPVAMIIG 285
Query: 255 -----HDLIIKLG-----------LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
H IKLG + + + +LI +Y++ +R A L++S+ +
Sbjct: 286 LGACSHIGAIKLGTVIHASAIRSCFDGFDNVRNALITMYSRCKDLRHADILFKSIKTKSL 345
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
+ +++SG+ D S+EA LF++M+ + + V + +L CA VA+L G++ H
Sbjct: 346 TTWNSMLSGYTHMDR-SEEASFLFREMLFSGIEPNYVTIASILPHCARVANLQQGKEFHC 404
Query: 359 FAFKYQSSYD-AAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
+ + + D + N+L++MYA+SG++ A R FD + ++ +++TSLIAGY G G
Sbjct: 405 YIMRREGFEDYLLLWNSLVEMYARSGKVLSAKRVFDSLRRRDKVTYTSLIAGYGIQGEGK 464
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
A++L+ +M + P+ VT +++L ACSH+GL EG LF M Y I+P EHFSC+
Sbjct: 465 TALKLFDEMIKHRIKPDQVTMVAVLSACSHSGLVTEGNVLFEKMSTLYGIVPAVEHFSCM 524
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKS 537
VDLF R G L A +I M +PT ++W+ ++GAC I+GNT +GE AA L +M+PE
Sbjct: 525 VDLFGRAGLLNKAKKVITSMPYRPTTAMWATLVGACRIHGNTEIGEWAAEKLLEMKPENP 584
Query: 538 VNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
YV+++N++ AAG W + R M + +RK PG +++
Sbjct: 585 GYYVLIANMHAAAGRWSKLAEVRTYMRDLGVRKAPGCTWV 624
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 212/447 (47%), Gaps = 51/447 (11%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHI-ITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
D TY S+L+ C +K +H I G+ NL++ ++ Y K G++ +AR+
Sbjct: 141 DNFTYPSVLKACGEKLDLDFGREVHESINAAYGHRWNLYVHNSLVSMYGKFGELDAARRL 200
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F++MPER+ VSW +IS YA G + A +F M +G N T+++ C + R
Sbjct: 201 FNQMPERDAVSWNGIISNYASRGLWKEAFELFEEMRLAGAEVNIITWNTIAGGCVQTRNF 260
Query: 148 QG------------------------------GRMIQGSIQKGRFVENLF-----VKSAL 172
+G G + G++ + + F V++AL
Sbjct: 261 KGALELLSQMRRCDIDLDPVAMIIGLGACSHIGAIKLGTVIHASAIRSCFDGFDNVRNAL 320
Query: 173 LDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDC 232
+ +Y++C + A ILF+ I+ K + +WN+M+ G ++++ +LFR M+ G++P+
Sbjct: 321 ITMYSRCKDLRHADILFKSIKTKSLTTWNSMLSGYTHMDRSEEASFLFREMLFSGIEPNY 380
Query: 233 FTLGSILRASVGGIELMKISQIHDLIIKL-GLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
T+ SIL L + + H I++ G E L SL+++YA+ G + SA +++
Sbjct: 381 VTIASILPHCARVANLQQGKEFHCYIMRREGFEDYLLLWNSLVEMYARSGKVLSAKRVFD 440
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
S+ + D ++ T+LI+G+ K A LF +MI ++ D V + +L+ C++ +
Sbjct: 441 SLRRRDKVTYTSLIAGYGI-QGEGKTALKLFDEMIKHRIKPDQVTMVAVLSACSHSGLVT 499
Query: 352 LGRQIHAFAFKYQSSYDAAVG-----NALIDMYAKSGEIADANRAFDEMGDKNVIS-WTS 405
G + F+ S+ V + ++D++ ++G + A + M + + W +
Sbjct: 500 EGNVL----FEKMSTLYGIVPAVEHFSCMVDLFGRAGLLNKAKKVITSMPYRPTTAMWAT 555
Query: 406 LIAGYAKHG---YGHEAIELYKKMKHE 429
L+ HG G A E +MK E
Sbjct: 556 LVGACRIHGNTEIGEWAAEKLLEMKPE 582
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 222/486 (45%), Gaps = 56/486 (11%)
Query: 107 AQNGYDENALLVFSAMLRSGVRANQ----FTYSSALRACARMRWLQGGRMIQGSIQKGRF 162
A+ G+ A FS + AN+ + SS L +C ++ L G+ + F
Sbjct: 13 ARKGHLLKAFETFSLIKLHASSANRDAILHSISSLLYSCTNLKSLPQGKQLHAHTISLGF 72
Query: 163 VENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRS 222
+L + L+ Y+ + DA + + + + WN +I G + ++ +R
Sbjct: 73 ENHLVLVPKLVTFYSSFSLLADAHTITVNSDIVNPLPWNLLISSYVNNGLHGEALSAYRE 132
Query: 223 MMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLI-IKLGLESSNKLTGSLIDVYAKYG 281
M+ +G++PD FT S+L+A ++L ++H+ I G + + SL+ +Y K+G
Sbjct: 133 MVHKGVRPDNFTYPSVLKACGEKLDLDFGREVHESINAAYGHRWNLYVHNSLVSMYGKFG 192
Query: 282 SIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM---------------- 325
+ +A +L+ M + D +S +IS +A KEAF+LF++M
Sbjct: 193 ELDAARRLFNQMPERDAVSWNGIISNYA-SRGLWKEAFELFEEMRLAGAEVNIITWNTIA 251
Query: 326 --------------ILKKM-----GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
+L +M +D V + + L C+++ ++ LG IHA A + S
Sbjct: 252 GGCVQTRNFKGALELLSQMRRCDIDLDPVAMIIGLGACSHIGAIKLGTVIHASAIR--SC 309
Query: 367 YDA--AVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
+D V NALI MY++ ++ A+ F + K++ +W S+++GY EA L++
Sbjct: 310 FDGFDNVRNALITMYSRCKDLRHADILFKSIKTKSLTTWNSMLSGYTHMDRSEEASFLFR 369
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
+M G+ PN VT S+L C+ +G E ++ + ++ +V+++AR
Sbjct: 370 EMLFSGIEPNYVTIASILPHCARVANLQQGKEFHCYIMRREGFEDYLLLWNSLVEMYARS 429
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD------MEPEKSV 538
G++ SA + + + + S I G YG G+ A + LFD ++P++
Sbjct: 430 GKVLSAKRVFDSLRRRDKVTYTSLIAG----YGIQGEGKTALK-LFDEMIKHRIKPDQVT 484
Query: 539 NYVVLS 544
VLS
Sbjct: 485 MVAVLS 490
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 143/294 (48%), Gaps = 14/294 (4%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
D LDP + L C A + +IHA I + ++ ++ +I Y++ D+ A
Sbjct: 274 DIDLDPVAMIIGLGACSHIGAIKLGTVIHASAIRSCFDGFDNVRNALITMYSRCKDLRHA 333
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
F + +++ +W +M+SGY E A +F ML SG+ N T +S L CAR+
Sbjct: 334 DILFKSIKTKSLTTWNSMLSGYTHMDRSEEASFLFREMLFSGIEPNYVTIASILPHCARV 393
Query: 145 RWLQGGRMIQGSIQKGR-FVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
LQ G+ I + F + L + ++L+++YA+ G + A +F+ + R+D V++ ++
Sbjct: 394 ANLQQGKEFHCYIMRREGFEDYLLLWNSLVEMYARSGKVLSAKRVFDSLRRRDKVTYTSL 453
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-------SVGGIELMKISQIHD 256
I G +QG + LF M++ +KPD T+ ++L A + G + K+S ++
Sbjct: 454 IAGYGIQGEGKTALKLFDEMIKHRIKPDQVTMVAVLSACSHSGLVTEGNVLFEKMSTLY- 512
Query: 257 LIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR 310
G+ + + ++D++ + G + A ++ SM + A + G R
Sbjct: 513 -----GIVPAVEHFSCMVDLFGRAGLLNKAKKVITSMPYRPTTAMWATLVGACR 561
>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
Length = 631
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 176/493 (35%), Positives = 276/493 (55%), Gaps = 6/493 (1%)
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P R VV+WTA+ISG QNGY +ALL FS M R ++ N FT+ A +A + G+
Sbjct: 19 PTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFTFPCAFKASTALCLPFAGK 78
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I K + + FV + D+Y+K G +A LF+ + ++V WNA I + G
Sbjct: 79 QIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDG 138
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
+ F R G +PD T + L A L Q+H L+I+ G E +
Sbjct: 139 RPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVAN 198
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
+IDVY K + A ++ M + + +S +++ ++D K A +F ++ +K G
Sbjct: 199 GIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEK-ACVVF--LMGRKEG 255
Query: 332 ID--DVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
I+ D ++ +++ A ++ L GR +HA A K D VG+AL+DMY K G I D
Sbjct: 256 IELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCE 315
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
+ F EM ++N++SW ++I+GYA G A+ L+++M+ E V N VT + +L ACS G
Sbjct: 316 QVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEA-VANYVTLICVLSACSRGG 374
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
G E+F M ++YRI P AEH++C+ D+ R G +E AY +++M I+PT S+W A+
Sbjct: 375 AVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQKMPIRPTISVWGAL 434
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
L AC +YG LG++AA NLF ++P+ S N+V+LSN++ AAG WD A RK M++ ++
Sbjct: 435 LNACRVYGEPELGKIAADNLFKLDPKDSGNHVLLSNMFAAAGRWDEATLVRKEMKDVGIK 494
Query: 570 KNPGYSFLQSSKK 582
K G S++ + K
Sbjct: 495 KGAGCSWVTAKNK 507
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 184/388 (47%), Gaps = 12/388 (3%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS 83
P+ P + + C+ ++ IHA + G ++ + Y+K G
Sbjct: 56 PNDFTFPCAFKASTALCLPFAGKQ----IHAIALKLGQINDKFVGCSAFDMYSKTGLKFE 111
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
A++ FD MP RNV W A IS +G A+ F R G + T+ + L ACA
Sbjct: 112 AQRLFDEMPPRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACAD 171
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
R L GR + G + + F ++ V + ++D+Y KC +E A ++F + R++ VSW M
Sbjct: 172 ARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTM 231
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG--GIELMKISQIHDLIIKL 261
+ + + +F ++G++ + + S++ A G G+E + +H L +K
Sbjct: 232 VAACEQNDEKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGR--SVHALAVKA 289
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDL 321
+E + +L+D+Y K GSI Q++ M + +++S A+ISG+A + A L
Sbjct: 290 CVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDM-AMTL 348
Query: 322 FKDMILKKMGIDDVILCLMLNICANVASLNLGRQI-HAFAFKYQSSYDAAVGNALIDMYA 380
F++M + + + V L +L+ C+ ++ LG +I + +Y+ A + DM
Sbjct: 349 FEEMQSEAVA-NYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLG 407
Query: 381 KSGEIADANRAFDEMGDKNVIS-WTSLI 407
++G + A +M + IS W +L+
Sbjct: 408 RAGMVERAYEFVQKMPIRPTISVWGALL 435
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 186/408 (45%), Gaps = 22/408 (5%)
Query: 175 LYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFT 234
+Y+K A +L + + VV+W A+I G G+ + F M R+ +KP+ FT
Sbjct: 1 MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60
Query: 235 LGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG-SLIDVYAKYGSIRSAYQLYRSM 293
+AS QIH + +KLG + ++K G S D+Y+K G A +L+ M
Sbjct: 61 FPCAFKASTALCLPFAGKQIHAIALKLG-QINDKFVGCSAFDMYSKTGLKFEAQRLFDEM 119
Query: 294 LKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG 353
++ A IS D K A D F + D + C LN CA+ L+LG
Sbjct: 120 PPRNVAVWNAYISNAVLDGRPGK-AIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLG 178
Query: 354 RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKH 413
RQ+H + D +V N +ID+Y K E+ A F+ MG +N +SW +++A ++
Sbjct: 179 RQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQN 238
Query: 414 GYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEH 473
+A ++ + EG+ D S++ A + G++ G E F ++ + E
Sbjct: 239 DEKEKACVVFLMGRKEGIELTDYMVSSVISA--YAGIS--GLE-FGRSVHALAVKACVEG 293
Query: 474 ----FSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
S +VD++ + G +E + +M + S W+A++ + G+ + A L
Sbjct: 294 DIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVS-WNAMISGYAHQGDVDM----AMTL 348
Query: 530 F-DMEPEKSVNYVVLSNIYTA---AGAWDNARKTRKLMEERSLRKNPG 573
F +M+ E NYV L + +A GA + + M +R R PG
Sbjct: 349 FEEMQSEAVANYVTLICVLSACSRGGAVKLGNEIFESMRDR-YRIEPG 395
>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
Length = 716
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 173/579 (29%), Positives = 323/579 (55%), Gaps = 8/579 (1%)
Query: 3 IVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
++ A + G+ QAL+ + + D SL+ C +A + +H H+I G
Sbjct: 1 MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+ +++ L T ++ YAK G + A++ F+ M +++ +W+++I+ YA+ G E A++++
Sbjct: 61 FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYR 120
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M+ GV N T++ AL CA + L GR I I + ++ ++ +LL++Y KC
Sbjct: 121 RMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCD 180
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR-QGMKPDCFTLGSIL 239
+ +A +FE ++ ++V S+ AMI G + ++ LF M + + ++P+ +T +IL
Sbjct: 181 EMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATIL 240
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
A G L K ++H + G +++ + +L+ +Y K GS A +++ SM ++I
Sbjct: 241 GAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVI 300
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
S T++I+ +A+ N +EA +LFK M ++ G+ LN CA + +L+ GR+IH
Sbjct: 301 SWTSMIAAYAQHGN-PQEALNLFKRMDVEPSGVS---FSSALNACALLGALDEGREIHHR 356
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
+ + + +L+ MYA+ G + DA R F+ M ++ S ++IA + +HG +A
Sbjct: 357 VVEANLA-SPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQA 415
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD 479
+ +Y+KM+ EG+ + +TF+S+L ACSHT L + + ++ + ++P EH+ C+VD
Sbjct: 416 LRIYRKMEQEGIPADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVD 475
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVN 539
+ R G+L A ++ M + A W +L C +G+ GE AAR +F++ P +++
Sbjct: 476 VLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVFELAPAETLP 535
Query: 540 YVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
YV LSN+Y AA +D+AR+ RK MEER + + S+++
Sbjct: 536 YVFLSNMYAAAKRFDDARRVRKEMEERGVTRPVAVSYIE 574
>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
Length = 772
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 197/563 (34%), Positives = 309/563 (54%), Gaps = 16/563 (2%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHL-----IHAHIITNG-YESNLHLSTKVIIFYAKVGDV 81
+ P +Y+ LL + Q L +H H+IT G + + + ++ YAK G +
Sbjct: 26 VSPESYVILLSSFPEYSLAEQVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSI 85
Query: 82 LSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC 141
AR+ F M E++ VSW +MI+G QNG A+ + +M R + FT S+L +C
Sbjct: 86 ADARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSC 145
Query: 142 ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN 201
A ++W + G+ I G K N+ V +AL+ LYA+ G++ + +F + D VSWN
Sbjct: 146 ASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWN 205
Query: 202 AMIGGLAMQGFN-DDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI--ELMKISQIHDLI 258
++IG LA + ++ F + +R G K + T S+L A EL K QIH L
Sbjct: 206 SIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGK--QIHGLA 263
Query: 259 IKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML-KTDIISCTALISGFARDDNHSKE 317
+K + +LI Y K G + +++ M + D ++ ++ISG+ ++ +K
Sbjct: 264 LKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAK- 322
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
A DL M+ +D + +L+ A+VA+L G ++HA + + D VG+AL+D
Sbjct: 323 ALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVD 382
Query: 378 MYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND-V 436
MY+K G + A R F+ M +N SW S+I+GYA+HG G EA++L+ MK +G P D V
Sbjct: 383 MYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHV 442
Query: 437 TFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQ 496
TF+ +L ACSH GL EG++ F M + Y + PR EHFSC+ DL R G+L+ + I +
Sbjct: 443 TFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDK 502
Query: 497 MNIKPTASLWSAILGACSIYG--NTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWD 554
M +KP +W +LGAC LG+ AA LF +EPE +VNYV+L N+Y A G W+
Sbjct: 503 MPVKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWE 562
Query: 555 NARKTRKLMEERSLRKNPGYSFL 577
+ K RK M++ ++K GYS++
Sbjct: 563 DLVKARKKMKDADVKKEAGYSWV 585
>gi|449503129|ref|XP_004161848.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 769
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 183/554 (33%), Positives = 293/554 (52%), Gaps = 5/554 (0%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y+S LQ C+ R IHA + +L V+ FY K G + + FD MP
Sbjct: 218 YVSFLQRCVLTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNFYVKCGRLSYGLQLFDEMP 277
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG-VRANQFTYSSALRACARMRWLQGGR 151
ERNVVSW+A+I+G+ Q+G AL +F M G + N+FT SAL AC+ + L
Sbjct: 278 ERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRLICSY 337
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG-LAMQ 210
I I + + N+F+ +A L + + +A +FE KD VSWNAM+ G L +
Sbjct: 338 QIYAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYLQLA 397
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
F FW R M + +KPD FT SIL E Q+H ++K G + +
Sbjct: 398 YFELPKFW--RRMNLESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVG 455
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
SL D+Y K + ++ + M +D+ S T + +G + K A + +M +
Sbjct: 456 NSLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAGCLQCGEPMK-ALKVIYEMKNVGV 514
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
++ L LN CAN+AS+ G++ H K + D V NAL+DMYAK G + AN
Sbjct: 515 RLNKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANV 574
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
F M +++V+SWT++I G+A +G EA++++ +M+ PN +TF+ +L ACS G
Sbjct: 575 VFRSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNACSQGGF 634
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
E W+ F+ M + I P +H+ C+V+L R G ++ A ++I QM +P + +W +L
Sbjct: 635 IDEAWKYFSSMSADHGIAPSEDHYVCMVNLLGRAGCIKEAEDLILQMPFQPGSLVWQTLL 694
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
GAC ++G+ G+ AA + +++ Y++LSN++ WD+ R+LME R ++K
Sbjct: 695 GACLVHGDIETGKRAAEHALNLDRNDPSTYILLSNMFAGGDNWDSVGILRELMETRDVKK 754
Query: 571 NPGYSFLQSSKKNI 584
PG S++ + ++ I
Sbjct: 755 VPGSSWMSNMRRTI 768
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 8/210 (3%)
Query: 8 FKTGQLKQALK--FSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNL 65
+ G+ +ALK + + L+ T + L C + + + H I G + ++
Sbjct: 494 LQCGEPMKALKVIYEMKNVGVRLNKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDV 553
Query: 66 HLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
+ ++ YAK G + SA F M ER+VVSWT MI G+A NG + AL +F M +
Sbjct: 554 CVDNALLDMYAKCGCMTSANVVFRSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKG 613
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFV---ENLFVKSALLDLYAKCGWI 182
N T+ L AC++ ++ S+ + E+ +V +++L + G I
Sbjct: 614 EAEPNHITFICVLNACSQGGFIDEAWKYFSSMSADHGIAPSEDHYV--CMVNLLGRAGCI 671
Query: 183 EDAWILFERIE-RKDVVSWNAMIGGLAMQG 211
++A L ++ + + W ++G + G
Sbjct: 672 KEAEDLILQMPFQPGSLVWQTLLGACLVHG 701
>gi|242056803|ref|XP_002457547.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
gi|241929522|gb|EES02667.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
Length = 762
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 186/532 (34%), Positives = 290/532 (54%), Gaps = 3/532 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H + G+ +++ + ++ Y K G + +AR+ F MP R+ +++ AMI G ++ G
Sbjct: 155 LHPVVTKLGFGASVVVCNTLLDAYCKQGFIAAARRVFLEMPHRDSITYNAMIMGCSRQGR 214
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
AL +F+AM R GV + FT+SS L M L GR I G + N+FV +A
Sbjct: 215 HGEALELFAAMRREGVDTSHFTFSSLLTVATGMVDLHLGRQIHGLFVRANPSCNVFVNNA 274
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
LLD Y+KC + D LF+ + +D VS+N MI + + LFR M G
Sbjct: 275 LLDFYSKCDSLGDLKQLFDEMSERDNVSYNVMISACSWNRCGGMALQLFRDMQTLGFDRR 334
Query: 232 CFTLGSILRASVGGIELMKIS-QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
S+L + G + +KI QIH +I GL + + +LID+Y+K G + +A ++
Sbjct: 335 TLPYASLLSVA-GALPHIKIGRQIHAQLILHGLTLEDFVGNALIDMYSKCGMLDAAKTIF 393
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
IS TALI+G ++ ++EA LF DM + D ++ +++A +
Sbjct: 394 AYKSDKTAISWTALITGCVQN-GQNEEALQLFCDMRRAGLSPDRATCSSIMKSSSSLAVI 452
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
+GRQ+HA+ K G+AL+DMYAK G + +A R F+EM +KN I+W ++I+ Y
Sbjct: 453 GIGRQLHAYLTKSGHMPSVFSGSALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAVISAY 512
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
A++G AI ++ M H G+ P+ VTFLS+L AC H GL E + F M Y + P
Sbjct: 513 AQYGQAKNAIRMFDSMLHCGLCPDPVTFLSVLAACGHNGLAEECMKYFDLMRYYYSMSPW 572
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
EH+SCV+D R G + +I +M + +WS+IL +C IYGN L +AA LF
Sbjct: 573 KEHYSCVIDTLGRAGCFDKIQKVIDEMPFEDDPIIWSSILHSCRIYGNQDLATVAAEKLF 632
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
M P + YV+LSNIY AG W+ A + +K+M +R ++K G S+++ +K
Sbjct: 633 TMVPTDATAYVILSNIYAKAGNWEGAARVKKIMRDRGVKKESGNSWVEIKQK 684
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 139/509 (27%), Positives = 238/509 (46%), Gaps = 56/509 (11%)
Query: 49 AHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPE--------------- 93
A ++ A Y LHL+ + G + +ARK D++PE
Sbjct: 26 ARMVKAGSDPATYRLELHLN-----YLVSSGRLAAARKVLDQVPEKSTLYLRFLNRILLG 80
Query: 94 -------------------RNVVSWTAMISGYAQNGYDENALLVFSAMLRSG-VRANQFT 133
RN +WT M+ +G +A+ +F MLR G + T
Sbjct: 81 CSRSCDLSAAKALFSAAARRNAKTWTIMMRMLPADGRGSDAVSLFRDMLREGEASPDDVT 140
Query: 134 YSSALRACARMRWLQGGRM--IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER 191
++ L + G + + + K F ++ V + LLD Y K G+I A +F
Sbjct: 141 ITTVLN-------VPGCDVGTLHPVVTKLGFGASVVVCNTLLDAYCKQGFIAAARRVFLE 193
Query: 192 IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI 251
+ +D +++NAMI G + QG + ++ LF +M R+G+ FT S+L + G ++L
Sbjct: 194 MPHRDSITYNAMIMGCSRQGRHGEALELFAAMRREGVDTSHFTFSSLLTVATGMVDLHLG 253
Query: 252 SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD 311
QIH L ++ + + +L+D Y+K S+ QL+ M + D +S +IS +
Sbjct: 254 RQIHGLFVRANPSCNVFVNNALLDFYSKCDSLGDLKQLFDEMSERDNVSYNVMISACSW- 312
Query: 312 DNHSKEAFDLFKDMILKKMGIDDVIL--CLMLNICANVASLNLGRQIHAFAFKYQSSYDA 369
+ A LF+DM + +G D L +L++ + + +GRQIHA + + +
Sbjct: 313 NRCGGMALQLFRDM--QTLGFDRRTLPYASLLSVAGALPHIKIGRQIHAQLILHGLTLED 370
Query: 370 AVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE 429
VGNALIDMY+K G + A F DK ISWT+LI G ++G EA++L+ M+
Sbjct: 371 FVGNALIDMYSKCGMLDAAKTIFAYKSDKTAISWTALITGCVQNGQNEEALQLFCDMRRA 430
Query: 430 GMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLES 489
G+ P+ T S++ + S + G +L + K +P S ++D++A+ G L+
Sbjct: 431 GLSPDRATCSSIMKSSSSLAVIGIGRQLHA-YLTKSGHMPSVFSGSALLDMYAKCGCLDE 489
Query: 490 AYNMIRQMNIKPTASLWSAILGACSIYGN 518
A +M K + + W+A++ A + YG
Sbjct: 490 AIRTFNEMPEKNSIT-WNAVISAYAQYGQ 517
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 182/557 (32%), Positives = 307/557 (55%), Gaps = 15/557 (2%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF-D 89
+T ++ LQ K + IH++++ NG+ ++ T +I Y+K + A F D
Sbjct: 38 TTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSD 97
Query: 90 RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG 149
E NV ++ A+ISG+ NG+ E + M GV ++FT+ A++AC + +
Sbjct: 98 PTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEI-- 155
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
+ I G + K ++F+ SAL++ Y K G +E A + FE + +DVV WNAM+ G A
Sbjct: 156 -KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQ 214
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLESSN 267
G + FR M + + P FT+ +L A +G + +I IH +K+G +S
Sbjct: 215 IGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRI--IHGFAMKMGYDSGV 272
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
++ SLID+Y K I A +++ M + DI S +++S + +H L M+
Sbjct: 273 AVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDG-TLRLLDRMLG 331
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAF------KYQSSYDAAVGNALIDMYAK 381
+ D V + +L C+++A+L GR+IH + + D + NA+IDMYAK
Sbjct: 332 AGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAK 391
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
G + DA+ F+ M +K+V SW +I GY HGYG+EA+E++ +M + P++VTF+ +
Sbjct: 392 CGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGV 451
Query: 442 LFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
L ACSH G +G M +KY + P EH++CV+D+ R GQL+ AY + M I+
Sbjct: 452 LSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEA 511
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRK 561
+W A+L AC ++ + L E+AA+ +F++EPE +YV++SN+Y A G ++ + R
Sbjct: 512 NPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRH 571
Query: 562 LMEERSLRKNPGYSFLQ 578
M ++++RK PG S+++
Sbjct: 572 TMRQQNVRKTPGCSWIE 588
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 157/454 (34%), Positives = 270/454 (59%), Gaps = 2/454 (0%)
Query: 125 SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIED 184
S + A++ Y++ L+ C + L GR++ I + F ++ + + LL++YAKCG +E+
Sbjct: 54 SYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEE 113
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG 244
A +FE++ ++D V+W +I G + D+ F M+R G P+ FTL S+++A+
Sbjct: 114 ARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAA 173
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
Q+H +K G +S+ + +L+D+Y +YG + A ++ ++ + +S AL
Sbjct: 174 ERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 233
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
I+G AR +++A +LF+ M+ + C++ L G+ +HA+ K
Sbjct: 234 IAGHARRSG-TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSG 292
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
A GN L+DMYAKSG I DA + FD + ++V+SW SL+ YA+HG+G EA+ ++
Sbjct: 293 EKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFE 352
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
+M+ G+ PN+++FLS+L ACSH+GL EGW + +++ K I+P A H+ VVDL R
Sbjct: 353 EMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYY-ELMKKDGIVPEAWHYVTVVDLLGRA 411
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLS 544
G L A I +M I+PTA++W A+L AC ++ NT LG AA ++F+++P+ +V+L
Sbjct: 412 GDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILY 471
Query: 545 NIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
NIY + G W++A + RK M+E ++K P S+++
Sbjct: 472 NIYASGGRWNDAARVRKKMKESGVKKEPACSWVE 505
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/388 (31%), Positives = 211/388 (54%), Gaps = 6/388 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D Y +LL+ C K Q ++HAHI+ + + ++ + ++ YAK G + ARK F
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
++MP+R+ V+WT +ISGY+Q+ +ALL F+ MLR G N+FT SS ++A A R
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G + G K F N+ V SALLDLY + G ++DA ++F+ +E ++ VSWNA+I G A
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
+ + + LF+ M+R G +P F+ S+ A L + +H +IK G +
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+L+D+YAK GSI A +++ + K D++S +L++ +A+ KEA F++M +
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQ-HGFGKEAVWWFEEM--R 355
Query: 329 KMGI--DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
++GI +++ +L C++ L+ G + K +A ++D+ ++G++
Sbjct: 356 RVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLN 415
Query: 387 DANRAFDEMG-DKNVISWTSLIAGYAKH 413
A R +EM + W +L+ H
Sbjct: 416 RALRFIEEMPIEPTAAIWKALLNACRMH 443
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 182/532 (34%), Positives = 290/532 (54%), Gaps = 9/532 (1%)
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSA 121
E N+ ++ YAK + AR+ FD P+ + VS+ +ISGYA A+++F
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKR 130
Query: 122 MLRSGVRANQFTYSSALRACA-RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M G + FT S + AC R+ + + + G F V +A + Y+K G
Sbjct: 131 MRELGFEVDGFTLSGLIAACCDRVDLI---KQLHCFAVSGGFDSYSSVNNAFVTYYSKGG 187
Query: 181 WIEDAWILFERIER-KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
+ +A +F ++ +D VSWN+MI + L++ M+ +G K D FTL S+L
Sbjct: 188 LLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVL 247
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGS---IRSAYQLYRSMLKT 296
A L+ Q H +IK G ++ + LID Y+K G + + ++++ +L
Sbjct: 248 NALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSP 307
Query: 297 DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI 356
D++ +ISG++ ++ HS+EA F+ M DD + + C+N++S + G+QI
Sbjct: 308 DLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQI 367
Query: 357 HAFAFKYQ-SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGY 415
H A K S +V NALI +Y KSG + DA R FD M + N +S+ +I GYA+HG+
Sbjct: 368 HGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGH 427
Query: 416 GHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFS 475
G EA+ LY++M G+ PN++TF+++L AC+H G EG + F M ++I P AEH+S
Sbjct: 428 GTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYS 487
Query: 476 CVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPE 535
C++DL R G+LE A I M KP + W+A+LGAC + N +L E AA+ L M+P
Sbjct: 488 CMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQPL 547
Query: 536 KSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKNILLL 587
+ YV+L+N+Y AG W+ RK M + +RK PG S+++ KK + +
Sbjct: 548 AATPYVMLANMYADAGKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFV 599
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 119/529 (22%), Positives = 231/529 (43%), Gaps = 88/529 (16%)
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG------------------------ 180
R L G+ + K + ++ + ++LY+KCG
Sbjct: 22 RDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIV 81
Query: 181 --WIEDAWI-----LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCF 233
+ +D+ I LF+ + D VS+N +I G A + LF+ M G + D F
Sbjct: 82 KAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGF 141
Query: 234 TLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
TL ++ A ++L+K Q+H + G +S + + + + Y+K G +R A ++ M
Sbjct: 142 TLSGLIAACCDRVDLIK--QLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGM 199
Query: 294 LK-TDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNL 352
D +S ++I + + +K A L+K+MI K ID L +LN ++ L
Sbjct: 200 DGLRDEVSWNSMIVAYGQHKEGAK-ALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIG 258
Query: 353 GRQIHAFAFKYQSSYDAAVGNALIDMYAKSG---EIADANRAFDEMGDKNVISWTSLIAG 409
GRQ H K ++ VG+ LID Y+K G ++D+ + F E+ +++ W ++I+G
Sbjct: 259 GRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISG 318
Query: 410 YA-KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELF---------- 458
Y+ + EA++ +++M+ G P+D +F+ + ACS+ +G ++
Sbjct: 319 YSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPS 378
Query: 459 ----------------TDMINKYRILPR-----AEHFSCVVDLFARRGQLESAYNMIRQM 497
++++ R+ R A F+C++ +A+ G A + ++M
Sbjct: 379 NRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRM 438
Query: 498 ---NIKPTASLWSAILGACSIYGNTSLGEL---AARNLFDMEPEKSVNYVVLSNIYTAAG 551
I P + AIL AC+ G G+ + F +EPE +Y + ++ AG
Sbjct: 439 LDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAE-HYSCMIDLLGRAG 497
Query: 552 AWDNARKTRKLMEER-----------SLRKNPGYSFLQSSKKNILLLEP 589
+ A + M + + RK+ + + + K +++++P
Sbjct: 498 KLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQP 546
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 95/181 (52%), Gaps = 3/181 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESN-LHLSTKVIIFYAKVGDVLSARKA 87
D +++ + C + + Q IH I + SN + ++ +I Y K G++L AR+
Sbjct: 344 DDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRV 403
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FDRMPE N VS+ MI GYAQ+G+ AL ++ ML SG+ N T+ + L ACA +
Sbjct: 404 FDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKV 463
Query: 148 QGGRMIQGSIQKGRFVENLFVK-SALLDLYAKCGWIEDAWILFERIERKD-VVSWNAMIG 205
G+ ++++ +E S ++DL + G +E+A + + K V+W A++G
Sbjct: 464 DEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLG 523
Query: 206 G 206
Sbjct: 524 A 524
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 19/149 (12%)
Query: 313 NHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG 372
N ++ F F+D++LK + D+ G+ +HA K + +
Sbjct: 2 NQTQWKFKSFRDLLLKSVAERDLFT---------------GKSLHALYVKSIVASSTYLS 46
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
N +++Y+K G ++ A AFD + NV S+ ++ YAK H A +L+ E
Sbjct: 47 NHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIVKAYAKDSKIHIARQLFD----ENPQ 102
Query: 433 PNDVTFLSLLFACSHTGLTCEGWELFTDM 461
P+ V++ +L+ + T LF M
Sbjct: 103 PDTVSYNTLISGYADARETVAAMVLFKRM 131
>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 750
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 182/577 (31%), Positives = 303/577 (52%), Gaps = 4/577 (0%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K G+L +A +F + S +Y L + C + ++ L+H + ++
Sbjct: 58 KHGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNRMRMGIENPSVL 117
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
L V+ Y + G + A K FD M + N VS T MIS YA+ G + A+ +FS ML SG
Sbjct: 118 LQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESG 177
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
+ Y++ L++ R L GR I + + N +++ ++++Y KCGW+ A
Sbjct: 178 DKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAK 237
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+F+++ K V+W ++ G G D+ LF ++ +G++ D F +L+A
Sbjct: 238 RVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLE 297
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
EL QIH + KLGLE + L+D Y K S SA + ++ + + + +S +A+IS
Sbjct: 298 ELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIIS 357
Query: 307 GFARDDNHSKEAFDLFKDMILKK-MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS 365
G+ + +EA FK + K + ++ + C+ +A N+G Q+HA A K
Sbjct: 358 GYCQMSQF-EEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSL 416
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKK 425
+ALI MY+K G + DA+ F+ M + ++++WT+ I+G+A +G EA+ L++K
Sbjct: 417 IGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEK 476
Query: 426 MKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRG 485
M GM PN VTF+++L ACSH GL +G M+ KY + P +H+ C++D++AR G
Sbjct: 477 MVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSG 536
Query: 486 QLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSN 545
L+ A ++ M +P A W L C + N LG++A L ++PE + YV+ N
Sbjct: 537 LLDEALRFMKNMPFEPDAMSWKCFLSGCWTHKNLELGKIAGEELRQLDPEDTAGYVLPFN 596
Query: 546 IYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+YT AG W+ A + KLM ER L+K S++Q K
Sbjct: 597 LYTWAGKWEEAAEVMKLMNERMLKKELSCSWIQEKGK 633
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 226/452 (50%), Gaps = 15/452 (3%)
Query: 107 AQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENL 166
+++G A F M ++GV + ++Y AC +R L GR++ ++ G ++
Sbjct: 57 SKHGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNRMRMGIENPSV 116
Query: 167 FVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ 226
+++ +L +Y +CG +EDA LF+ + + VS MI A QG D + LF M+
Sbjct: 117 LLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLES 176
Query: 227 GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSA 286
G KP ++L++ V L QIH +I+ GL S+ + ++++Y K G + A
Sbjct: 177 GDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGA 236
Query: 287 YQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICAN 346
+++ M ++ T L+ G+ + +++A LF D+I + + D + ++L CA+
Sbjct: 237 KRVFDQMAVKKPVAWTGLMVGYTQ-AGRARDALKLFVDLITEGVEWDSFVFSVVLKACAS 295
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
+ L G+QIHA K + +VG L+D Y K A RAF E+ + N +SW+++
Sbjct: 296 LEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAI 355
Query: 407 IAGYAKHGYGHEAIELYKKMKHE-GMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
I+GY + EA++ +K ++ + +V N T+ S+ ACS G ++ D I +
Sbjct: 356 ISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRS 415
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
I + S ++ ++++ G L+ A+ + M+ P W+A + + YGN S
Sbjct: 416 LIGSQYGE-SALITMYSKCGCLDDAHEVFESMD-NPDIVAWTAFISGHAYYGNAS----E 469
Query: 526 ARNLFD------MEPEKSVNYVVLSNIYTAAG 551
A LF+ M+P SV ++ + + AG
Sbjct: 470 ALRLFEKMVSCGMKP-NSVTFIAVLTACSHAG 500
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 186/572 (32%), Positives = 296/572 (51%), Gaps = 34/572 (5%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYA--KVGDVLSARKAFDRMP 92
++L+F Q IHAH++ + + ++K++ YA ++ A+ F+++P
Sbjct: 74 NILEFIDQCTNTMQLKQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIP 133
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR-ANQFTYSSALRACARMRWLQGGR 151
+ N+ W +I GYA + + L+F ML S N+FT+ +A +R++ L G
Sbjct: 134 QPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGS 193
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
++ G + K +LF+ ++L++ Y G + A +F + KDVVSWNAMI A+ G
Sbjct: 194 VLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGG 253
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
D + LF+ M + +KP+ T+ S+L A I+L I I G L
Sbjct: 254 LPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNN 313
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR----DDNH------------- 314
+++D+Y K G I A L+ M + DI+S T ++ G A+ D+ H
Sbjct: 314 AMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAA 373
Query: 315 -------------SKEAFDLFKDMILKK-MGIDDVILCLMLNICANVASLNLGRQIHAFA 360
+ A LF +M L K D+V L L A + +++ G IH +
Sbjct: 374 WNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYI 433
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
K+ + + + +L+DMYAK G + A F + K+V W+++I A +G G A+
Sbjct: 434 KKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAAL 493
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDL 480
+L+ M + PN VTF ++L AC+H GL EG +LF M Y I+P+ +H+ CVVD+
Sbjct: 494 DLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDI 553
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNY 540
F R G LE A + I +M I PTA++W A+LGACS +GN L ELA +NL ++EP +
Sbjct: 554 FGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGAF 613
Query: 541 VVLSNIYTAAGAWDNARKTRKLMEERSLRKNP 572
V+LSNIY AG W+ RKLM + ++K P
Sbjct: 614 VLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEP 645
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 135/295 (45%), Gaps = 33/295 (11%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T +S+L C K I ++I NG+ +L L+ ++ Y K G + A+ F++M
Sbjct: 276 TMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKM 335
Query: 92 PERNVVSWTAM-------------------------------ISGYAQNGYDENALLVFS 120
E+++VSWT M IS Y QNG AL +F
Sbjct: 336 SEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFH 395
Query: 121 AM-LRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
M L + ++ T AL A A++ + G I I+K N + ++LLD+YAKC
Sbjct: 396 EMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKC 455
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G + A +F +ERKDV W+AMIG LAM G + LF SM+ +KP+ T +IL
Sbjct: 456 GNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNIL 515
Query: 240 RASVGGIELMKISQIHDLIIKL-GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
A + + Q+ + + L G+ + ++D++ + G + A M
Sbjct: 516 CACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKM 570
>gi|242066458|ref|XP_002454518.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
gi|241934349|gb|EES07494.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
Length = 834
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 296/545 (54%), Gaps = 24/545 (4%)
Query: 34 MSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPE 93
+ LL C A +HAH I N + S+ + T ++ YAK ++ AR+AF +P
Sbjct: 249 LELLCRCKAITCLSTARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPN 308
Query: 94 RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMI 153
V + AM+ G + G A+ +F M RSG+ + S ACA ++
Sbjct: 309 HTVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACAEVKG------- 361
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN 213
F ++ V++A+LDLY KC + +A+++F+ +E++D VSWN +I L
Sbjct: 362 --------FDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECY 413
Query: 214 DDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSL 273
+D+ M+R GM+ D FT GS+L+A G L +H IK GL ++ ++
Sbjct: 414 EDTIVHLNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTV 473
Query: 274 IDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGID 333
+D+Y K G I A +L+ + +++S ++I+GF+ + S+EA F +M+ + D
Sbjct: 474 VDMYCKCGMITEALKLHDRIGGQELVSWNSIIAGFSLN-KQSEEAQKFFSEMLDMGVKPD 532
Query: 334 DVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFD 393
+L+ CAN+A++ LG+QIH K + D + + L+DMYAK G + D+ F+
Sbjct: 533 HFTYATVLDSCANLATIELGKQIHGQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQLMFE 592
Query: 394 EMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCE 453
++ + +SW ++I GYA HG G EA+E++++ + + PN TF+++L ACSH GL +
Sbjct: 593 KVQKLDFVSWNAMICGYALHGQGFEALEMFERTQKANVAPNHATFVAVLRACSHVGLLDD 652
Query: 454 GWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGAC 513
G F M ++Y++ P+ EHF+C+ + A IR M ++ A +W +L C
Sbjct: 653 GCRYFHLMTSRYKLEPQLEHFACM--------GPQEALKFIRSMPLEADAVIWKTLLSIC 704
Query: 514 SIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPG 573
I + + E AA N+ ++P+ S Y++LSN+Y +G W + +TR+LM + L+K PG
Sbjct: 705 KIRQDVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPG 764
Query: 574 YSFLQ 578
S+++
Sbjct: 765 CSWIE 769
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 131/545 (24%), Positives = 240/545 (44%), Gaps = 50/545 (9%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D +T LL+ C IHA + G E ++ + ++ Y K + A F
Sbjct: 162 DRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYGKCRSLEDALHFF 221
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
M ERN VSW A+I+G QN E + + R C + L
Sbjct: 222 HGMGERNSVSWGAVIAGCVQN---EQYMRGLELLCR----------------CKAITCLS 262
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
R + K +F + V +A++D+YAK + DA F + V + NAM+ GL
Sbjct: 263 TARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNHTVETCNAMMVGLV 322
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLESS 266
G ++ LF+ M R G+ +L + A V G ++ D+ ++
Sbjct: 323 RTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACAEVKGFDV-------DVCVR------ 369
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+++D+Y K ++ AY +++ M + D +S +I+ +++ + L +M+
Sbjct: 370 ----NAILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECYEDTIVHL-NEML 424
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
M DD +L CA + SL G +H A K DA V + ++DMY K G I
Sbjct: 425 RSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMIT 484
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
+A + D +G + ++SW S+IAG++ + EA + + +M G+ P+ T+ ++L +C+
Sbjct: 485 EALKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDHFTYATVLDSCA 544
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
+ G ++ +I K +L S +VD++A+ G + + M ++ S W
Sbjct: 545 NLATIELGKQIHGQII-KQEMLGDEFISSTLVDMYAKCGNMPDSQLMFEKVQKLDFVS-W 602
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSV-----NYVVLSNIYTAAGAWDNARKTRK 561
+A++ +++G A +F+ + +V +V + + G D+ +
Sbjct: 603 NAMICGYALHGQG----FEALEMFERTQKANVAPNHATFVAVLRACSHVGLLDDGCRYFH 658
Query: 562 LMEER 566
LM R
Sbjct: 659 LMTSR 663
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 135/569 (23%), Positives = 230/569 (40%), Gaps = 91/569 (15%)
Query: 10 TGQLKQALKFSLSCPD-------TLLDPSTYMSLLQFCID--KKAERQAHLIHAHIITNG 60
TG + ++L S CP L +T+ + Q C A HA ++ +G
Sbjct: 4 TGHITRSL--SPGCPGRPTPAQAAFLATATFSHVYQLCASAGHSALATGQAAHARMLVSG 61
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN------------------------- 95
+ + +S ++ YA+ G A FD MP R+
Sbjct: 62 FVPTMFVSNCLLQMYARCGGAAHAHGVFDTMPHRDTVSWNTMLTAYAHMGDTGMATSLLC 121
Query: 96 ------VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG 149
VVSW A++SGY Q G + + + M R GV ++ T + L+AC + L
Sbjct: 122 VMPDPDVVSWNALLSGYCQRGMFRDLVGLSIEMARCGVAPDRTTLAVLLKACGGLDDLAL 181
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
G I K ++ SAL+D+Y KC +EDA F + ++ VSW A+I G
Sbjct: 182 GVQIHALAVKTGLEMDVRAGSALVDMYGKCRSLEDALHFFHGMGERNSVSWGAVIAGC-- 239
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLGLESSNK 268
++ + + G L I + + Q+H IK S
Sbjct: 240 ------------------VQNEQYMRGLELLCRCKAITCLSTARQLHAHAIKNKFSSDRV 281
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +++DVYAK S+ A + + + + +C A++ G R EA LF+ M
Sbjct: 282 VGTAIVDVYAKADSLVDARRAFFGLPNHTVETCNAMMVGLVR-TGLGAEAMQLFQFMTRS 340
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+G V L + + CA V ++ D V NA++D+Y K + +A
Sbjct: 341 GIGFGVVSLSGVFSACAEVKGFDV---------------DVCVRNAILDLYGKCKALVEA 385
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS-- 446
F EM ++ +SW ++IA ++ + I +M GM +D T+ S+L AC+
Sbjct: 386 YLVFQEMEQRDSVSWNTIIAALEQNECYEDTIVHLNEMLRSGMEADDFTYGSVLKACAGL 445
Query: 447 ---HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
GL G + K + A S VVD++ + G + A + ++ +
Sbjct: 446 QSLEYGLVVHGKAI------KSGLGLDAFVSSTVVDMYCKCGMITEALKLHDRIGGQELV 499
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDM 532
S W++I+ S+ + + + DM
Sbjct: 500 S-WNSIIAGFSLNKQSEEAQKFFSEMLDM 527
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 70/141 (49%), Gaps = 2/141 (1%)
Query: 12 QLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLST 69
Q ++A KF D + P TY ++L C + IH II + +S+
Sbjct: 513 QSEEAQKFFSEMLDMGVKPDHFTYATVLDSCANLATIELGKQIHGQIIKQEMLGDEFISS 572
Query: 70 KVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA 129
++ YAK G++ ++ F+++ + + VSW AMI GYA +G AL +F ++ V
Sbjct: 573 TLVDMYAKCGNMPDSQLMFEKVQKLDFVSWNAMICGYALHGQGFEALEMFERTQKANVAP 632
Query: 130 NQFTYSSALRACARMRWLQGG 150
N T+ + LRAC+ + L G
Sbjct: 633 NHATFVAVLRACSHVGLLDDG 653
>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
Length = 837
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 192/579 (33%), Positives = 311/579 (53%), Gaps = 6/579 (1%)
Query: 3 IVRANFKTGQLKQALK-FSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITN 59
I+ K+G+ + +L+ F+L ++ P Y+ S+L C + IHA+++ +
Sbjct: 214 IITGYTKSGRSEVSLQLFNLMMESNVI-PDKYVLSSILNACSVLGYLKGGKQIHAYVLRS 272
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
+ ++ +I FY K G V + + FDR+ +N++SWT MI+GY QN YD A+ +
Sbjct: 273 ETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELV 332
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
M R G + +++ SS L +C + LQ GR I + K + FV +AL+D+Y+KC
Sbjct: 333 GEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKC 392
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
++DA +F+ + VV +NAMI G + QG+ + +F+ M + + P T S+L
Sbjct: 393 NALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLL 452
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
S + L QIH LIIK G + +LIDVY+K IR A ++ DI+
Sbjct: 453 GLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIV 512
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
+L SG+ S+EAF L+ D+ L + ++ + + +ASL G+Q H
Sbjct: 513 VWNSLFSGYNLQLK-SEEAFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQ 571
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
K D + NAL+DMYAK G + +A + F K+ W S+I+ YA+HG EA
Sbjct: 572 VMKMGLESDPFITNALVDMYAKCGSVEEAEKIFSSSVWKDTACWNSMISMYAQHGKVEEA 631
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD 479
+ +++ M + PN VTF+S+L ACSH G +G + + M +Y I P EH++ VV
Sbjct: 632 LRMFETMVSNNINPNYVTFVSVLSACSHVGFVEDGLQHYNSMA-RYGIEPGIEHYASVVT 690
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVN 539
L R G+L A I +M I+P A +W ++L AC ++GN L + AA ++P S +
Sbjct: 691 LLGRAGRLTEAREFIEKMTIRPAALVWRSLLSACRVFGNVELAKHAAEMAISIDPMDSGS 750
Query: 540 YVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
YV+LSNI+ + G W + ++ R M+ + K PG S+++
Sbjct: 751 YVMLSNIFASKGMWGDVKRLRLKMDVNGVVKEPGQSWIE 789
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 159/587 (27%), Positives = 294/587 (50%), Gaps = 39/587 (6%)
Query: 17 LKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYA 76
L+F +C D L + S+++ C+ + +H+++I +G+ ++++ T +++ YA
Sbjct: 130 LEFQRTCVDKL-NEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYA 188
Query: 77 KVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSS 136
K G++ AR FD + + V+WTA+I+GY ++G E +L +F+ M+ S V +++ SS
Sbjct: 189 KHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSS 248
Query: 137 ALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKD 196
L AC+ + +L+GG+ I + + ++ + L+D Y KCG ++ LF+R++ K+
Sbjct: 249 ILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKN 308
Query: 197 VVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS-QIH 255
++SW MI G ++ ++ L M R G KPD + S+L S G ++ ++ QIH
Sbjct: 309 IISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVL-TSCGSVDALQHGRQIH 367
Query: 256 DLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHS 315
+IK+ LE N +T +LID+Y+K ++ A +++ + ++ A+I G++R +
Sbjct: 368 SYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSR-QGYL 426
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNAL 375
A ++F++M LK + + +L + A + L L +QIH KY S D +AL
Sbjct: 427 CGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSAL 486
Query: 376 IDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND 435
ID+Y+K I DA F+ +K+++ W SL +GY EA +LY ++ PN+
Sbjct: 487 IDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNE 546
Query: 436 VTFLSLLFACS-----------HTGLTCEGWE-------LFTDMINKYRILPRAEH---- 473
TF +L A S H + G E DM K + AE
Sbjct: 547 FTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAKCGSVEEAEKIFSS 606
Query: 474 --------FSCVVDLFARRGQLESAYNMIRQM---NIKPTASLWSAILGACSIYGNTSLG 522
++ ++ ++A+ G++E A M M NI P + ++L ACS G G
Sbjct: 607 SVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFVSVLSACSHVGFVEDG 666
Query: 523 ELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
++ E + + +++ T G + R+ +E+ ++R
Sbjct: 667 LQHYNSMARYGIEPGIEH--YASVVTLLGRAGRLTEAREFIEKMTIR 711
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 130/390 (33%), Positives = 220/390 (56%), Gaps = 4/390 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H ++ G + ++ LS ++ Y K+G V A FD+MP RN+VSW++++S Y Q GY
Sbjct: 62 VHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQLGY 121
Query: 112 DENALLVFSAMLRSGV-RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
+E ALL F R+ V + N++ +S +RAC + + G + + K F E+++V +
Sbjct: 122 NEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVGT 181
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
+L+ LYAK G I+ A ++F+ + K V+W A+I G G ++ S LF MM + P
Sbjct: 182 SLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIP 241
Query: 231 DCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
D + L SIL A SV G L QIH +++ + LID Y K G +++ L
Sbjct: 242 DKYVLSSILNACSVLGY-LKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKAL 300
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ + +IIS T +I+G+ + +++ EA +L +M D+ +L C +V +
Sbjct: 301 FDRLDVKNIISWTTMIAGYMQ-NSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDA 359
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
L GRQIH++ K +D V NALIDMY+K + DA R FD + +V+ + ++I G
Sbjct: 360 LQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEG 419
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFL 439
Y++ GY A+E++++M+ + + P+ +TF+
Sbjct: 420 YSRQGYLCGALEVFQEMRLKHVSPSFLTFV 449
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 142/295 (48%), Gaps = 5/295 (1%)
Query: 219 LFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYA 278
+ S Q +K L ++L A V ++ ++H ++ GL+ L+ L+ Y
Sbjct: 27 MLPSFSSQNVKVKGRALANLLLAPVSNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYF 86
Query: 279 KYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEA--FDLFKDMILKKMGIDDVI 336
K GS+ A L+ M +++S ++++S + + + K F F+ + K+ ++ I
Sbjct: 87 KIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKL--NEYI 144
Query: 337 LCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG 396
L ++ C G Q+H++ K D VG +L+ +YAK GEI A FD +
Sbjct: 145 LASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLV 204
Query: 397 DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWE 456
K ++WT++I GY K G +++L+ M ++P+ S+L ACS G G +
Sbjct: 205 LKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQ 264
Query: 457 LFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
+ ++ + + ++ ++D + + G++++ + ++++K S + I G
Sbjct: 265 IHAYVLRSETKMDVST-YNVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAG 318
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 157/454 (34%), Positives = 270/454 (59%), Gaps = 2/454 (0%)
Query: 125 SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIED 184
S + A++ Y++ L+ C + L GR++ I + F ++ + + LL++YAKCG +E+
Sbjct: 54 SYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEE 113
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG 244
A +FE++ ++D V+W +I G + D+ F M+R G P+ FTL S+++A+
Sbjct: 114 ARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAA 173
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
Q+H +K G +S+ + +L+D+Y +YG + A ++ ++ + +S AL
Sbjct: 174 ERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 233
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
I+G AR +++A +LF+ M+ + C++ L G+ +HA+ K
Sbjct: 234 IAGHARRSG-TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSG 292
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
A GN L+DMYAKSG I DA + FD + ++V+SW SL+ YA+HG+G EA+ ++
Sbjct: 293 EKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFE 352
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
+M+ G+ PN+++FLS+L ACSH+GL EGW + +++ K I+P A H+ VVDL R
Sbjct: 353 EMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYY-ELMKKDGIVPEAWHYVTVVDLLGRA 411
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLS 544
G L A I +M I+PTA++W A+L AC ++ NT LG AA ++F+++P+ +V+L
Sbjct: 412 GDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILY 471
Query: 545 NIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
NIY + G W++A + RK M+E ++K P S+++
Sbjct: 472 NIYASGGRWNDAARVRKKMKESGVKKEPACSWVE 505
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 125/390 (32%), Positives = 214/390 (54%), Gaps = 10/390 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D Y +LL+ C K Q ++HAHI+ + + ++ + ++ YAK G + ARK F
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
++MP+R+ V+WT +ISGY+Q+ +ALL F+ MLR G N+FT SS ++A A R
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G + G K F N+ V SALLDLY + G ++DA ++F+ +E ++ VSWNA+I G A
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGLESS 266
+ + + LF+ M+R G +P F+ S+ A S G +E K +H +IK G +
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGK--WVHAYMIKSGEKLV 296
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+L+D+YAK GSI A +++ + K D++S +L++ +A+ KEA F++M
Sbjct: 297 AFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQ-HGFGKEAVWWFEEM- 354
Query: 327 LKKMGI--DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
+++GI +++ +L C++ L+ G + K +A ++D+ ++G+
Sbjct: 355 -RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGD 413
Query: 385 IADANRAFDEMG-DKNVISWTSLIAGYAKH 413
+ A R +EM + W +L+ H
Sbjct: 414 LNRALRFIEEMPIEPTAAIWKALLNACRMH 443
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 174/554 (31%), Positives = 308/554 (55%), Gaps = 3/554 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T S+L+ C + + +IH I G + ++ ++ ++ Y K ++ R+ F
Sbjct: 215 DSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIF 274
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D+M R+ VSW MI GY+Q G E ++ +F M+ + + T +S L+AC + L+
Sbjct: 275 DKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLE 333
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ + + + + + L+++YAKCG + + +F ++ KD VSWN+MI
Sbjct: 334 FGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYI 393
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G D++ LF+ MM+ +KPD T +L S +L ++H + K+G S+
Sbjct: 394 QNGSFDEAMKLFK-MMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIV 452
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
++ +L+D+YAK G + + +++ +M DII+ +I+ ++ + M +
Sbjct: 453 VSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSED-CNLGLRMISRMRTE 511
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ D + +L +C+ +A+ G++IH FK D VGN LI+MY+K G + ++
Sbjct: 512 GVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNS 571
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ F M K+V++WT+LI+ +G G +A+ + +M+ G+VP+ V F++++FACSH+
Sbjct: 572 FQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHS 631
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
GL EG F M Y+I PR EH++CVVDL +R L+ A + I M +KP +S+W A
Sbjct: 632 GLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGA 691
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L AC + G+T + E + + ++ P+ + YV++SNIY A G WD R RK ++ R L
Sbjct: 692 LLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGL 751
Query: 569 RKNPGYSFLQSSKK 582
+K+PG S+++ K
Sbjct: 752 KKDPGCSWMEIQNK 765
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 162/536 (30%), Positives = 283/536 (52%), Gaps = 14/536 (2%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITN 59
+I+RA G +AL L P TY S++ C A IH ++
Sbjct: 85 SIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDM 144
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G+ S+L++ +I Y + D+ ARK F+ MP R+VVSW ++ISGY NGY AL ++
Sbjct: 145 GFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIY 204
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
GV + +T SS LRAC + ++ G +I G I+K +++ V + LL +Y K
Sbjct: 205 YRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKF 264
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
+ D +F+++ +D VSWN MI G + G ++S LF M+ Q KPD T+ SIL
Sbjct: 265 NGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSIL 323
Query: 240 RAS--VGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
+A +G +E K +HD +I G E + LI++YAK G++ ++ +++ M D
Sbjct: 324 QACGHLGDLEFGK--YVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKD 381
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
+S ++I+ + ++ + EA LFK M+ + D V ++L++ + L+LG+++H
Sbjct: 382 SVSWNSMINVYIQNGSFD-EAMKLFK-MMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELH 439
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
K + + V N L+DMYAK GE+ D+ + F+ M +++I+W ++IA +
Sbjct: 440 CDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCN 499
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
+ + +M+ EG+ P+ T LS+L CS +G E+ I K + + +
Sbjct: 500 LGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIH-GCIFKLGLESDVPVGNVL 558
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDME 533
++++++ G L +++ + + M K + W+A++ AC +YG G+ A R +ME
Sbjct: 559 IEMYSKCGSLRNSFQVFKLMKTKDVVT-WTALISACGMYGE---GKKAVRAFGEME 610
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 241/477 (50%), Gaps = 8/477 (1%)
Query: 48 QAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM--PERNVVSWTAMISG 105
Q H +H+ IIT G ++ S K+I YA D S+ F R+ P NV W ++I
Sbjct: 31 QLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVF-RLASPSNNVYLWNSIIRA 89
Query: 106 YAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVEN 165
NG AL ++S R ++ + +T+ S + ACA + + + I + F +
Sbjct: 90 LTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSD 149
Query: 166 LFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR 225
L++ +AL+D+Y + ++ A +FE + +DVVSWN++I G G+ +++ ++
Sbjct: 150 LYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRN 209
Query: 226 QGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRS 285
G+ PD +T+ S+LRA G + + IH LI K+G++ + L+ +Y K+ +
Sbjct: 210 LGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLID 269
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
+++ M+ D +S +I G+++ + +E+ LF +M+ + D + + +L C
Sbjct: 270 GRRIFDKMVLRDAVSWNTMICGYSQVGLY-EESIKLFMEMV-NQFKPDLLTITSILQACG 327
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
++ L G+ +H + D N LI+MYAK G + + F M K+ +SW S
Sbjct: 328 HLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNS 387
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
+I Y ++G EA++L+K MK + + P+ VT++ LL + G G EL D+ K
Sbjct: 388 MINVYIQNGSFDEAMKLFKMMKTD-VKPDSVTYVMLLSMSTQLGDLHLGKELHCDLA-KM 445
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLG 522
+ +VD++A+ G++ + + M + + W+ I+ +C + +LG
Sbjct: 446 GFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIIT-WNTIIASCVHSEDCNLG 501
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 173/393 (44%), Gaps = 66/393 (16%)
Query: 237 SILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR-SMLK 295
SI RA ++ ++H LII LGL S + LI YA + S++ ++R +
Sbjct: 18 SISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPS 77
Query: 296 TDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQ 355
++ ++I + S EA L+ + ++ D ++N CA + + +
Sbjct: 78 NNVYLWNSIIRALTHNGLFS-EALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKS 136
Query: 356 IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGY 415
IH D +GNALIDMY + ++ A + F+EM ++V+SW SLI+GY +GY
Sbjct: 137 IHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGY 196
Query: 416 GHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG--------------------- 454
+EA+E+Y + ++ G+VP+ T S+L AC G EG
Sbjct: 197 WNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNG 256
Query: 455 ----WELFTDMINKYRILPR-----AEHFSCVVDLFARRGQLESAYNMIRQM--NIKPTA 503
+ F +I+ RI + A ++ ++ +++ G E + + +M KP
Sbjct: 257 LLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDL 316
Query: 504 SLWSAILGACSIYGNTSLGE-------------------------------LAARNLFD- 531
++IL AC G+ G+ LA++ +F
Sbjct: 317 LTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSG 376
Query: 532 MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
M+ + SV++ + N+Y G++D A K K+M+
Sbjct: 377 MKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMK 409
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 178/556 (32%), Positives = 305/556 (54%), Gaps = 6/556 (1%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHII-TNGYESNLHLSTKVIIFYAKVGDVLS 83
D +P Y ++L C KA + IH+ I T G + ++ L ++ YAK G +
Sbjct: 116 DLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLED 175
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
A++ F+RM R+V SW AMI+ YAQ+G+ E A+ ++ M V + T++S L AC+
Sbjct: 176 AKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSN 232
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
+ L GR I I +L +++ALL +YA+C ++DA +F+R+ R+DVVSW+AM
Sbjct: 233 LGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAM 292
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGL 263
I A D++ + M +G++P+ +T S+L A +L +HD I+ G
Sbjct: 293 IAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGY 352
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
+ + +L+D+Y YGS+ A L+ + D T LI G+++ H +L++
Sbjct: 353 KITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQ-GHRTGVLELYR 411
Query: 324 DMI-LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
+M K+ +I +++ CA++ + RQ H+ D + +L++MY++
Sbjct: 412 EMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRW 471
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
G + A + FD+M ++ ++WT+LIAGYAKHG A+ LYK+M+ EG P+++TF+ +L
Sbjct: 472 GNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVL 531
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
+ACSH GL +G +LF + + Y + P H+SC++DL +R G+L A +I M ++P
Sbjct: 532 YACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPN 591
Query: 503 ASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKL 562
WS++LGA I+ + AA + ++P +YV+LSN++ G R
Sbjct: 592 DVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNT 651
Query: 563 MEERSLRKNPGYSFLQ 578
M R ++K G S+++
Sbjct: 652 MVARGVKKRRGSSWIE 667
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 152/520 (29%), Positives = 267/520 (51%), Gaps = 27/520 (5%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y L+ C D ++ RQ H I+ +N+ L +++ Y K G V SAR AFD +
Sbjct: 30 YRDALRQCQDLESVRQIH----DRISGAASANVFLGNEIVRAYGKCGSVASARAAFDAIA 85
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
+N SW +M++ YAQNG+ AL ++ M ++ N Y++ L ACA ++ L+ G+
Sbjct: 86 RKNDYSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIKALEEGKA 142
Query: 153 IQGSIQKGRFVE-NLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I I + ++ ++ ++++LL +YAKCG +EDA LFER+ + V SWNAMI A G
Sbjct: 143 IHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSG 202
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
+++ L+ M ++P T S+L A L + +IH LI G E L
Sbjct: 203 HFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQN 259
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
+L+ +YA+ + A ++++ + + D++S +A+I+ FA D EA + + M L+ +
Sbjct: 260 ALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFD-EAIEFYSKMQLEGVR 318
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
+ +L CA+V L GR +H G AL+D+Y G + +A
Sbjct: 319 PNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSL 378
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP-NDVTFLSLLFACSHTGL 450
FD++ +++ WT LI GY+K G+ +ELY++MK+ VP + + ++ AC+ G
Sbjct: 379 FDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGA 438
Query: 451 TCEGWELFTD-----MINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
+ + +D MI+ + + + +V++++R G LESA + +M+ + T +
Sbjct: 439 FADARQAHSDIEADGMISDFVLA------TSLVNMYSRWGNLESARQVFDKMSSRDTLA- 491
Query: 506 WSAILGACSIYGN--TSLGELAARNLFDMEPEKSVNYVVL 543
W+ ++ + +G +LG L EP + VVL
Sbjct: 492 WTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVL 531
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 112/227 (49%), Gaps = 12/227 (5%)
Query: 341 LNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNV 400
L C ++ S+ RQIH +S + +GN ++ Y K G +A A AFD + KN
Sbjct: 34 LRQCQDLESV---RQIHD-RISGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKND 89
Query: 401 ISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTD 460
SW S++ YA++G+ A++LYK+M + PN V + ++L AC+ EG + +
Sbjct: 90 YSWGSMLTAYAQNGHYRAALDLYKRMD---LQPNPVVYTTVLGACASIKALEEGKAIHSR 146
Query: 461 MINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTS 520
+ + + ++ ++A+ G LE A + +M+ + +S W+A++ A Y +
Sbjct: 147 ISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSS-WNAMIAA---YAQSG 202
Query: 521 LGELAARNLFDMEPEKSV-NYVVLSNIYTAAGAWDNARKTRKLMEER 566
E A R DM+ E SV + + + + G D RK L+ R
Sbjct: 203 HFEEAIRLYEDMDVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSR 249
>gi|147784524|emb|CAN61725.1| hypothetical protein VITISV_032420 [Vitis vinifera]
Length = 763
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 178/516 (34%), Positives = 281/516 (54%), Gaps = 5/516 (0%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITN 59
+++ + GQ AL+F + + P T+ S+++ C +HAH++ +
Sbjct: 134 SVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKS 193
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
+ +++ +I Y K ++ A F RM R+++SW +MI+G++Q GY+ AL F
Sbjct: 194 EFGAHIIAQNALISMYTKSNVIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYF 253
Query: 120 SAMLRSGVR-ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
ML GV N+F + S AC+ + + GR + G K ++F +L D+YAK
Sbjct: 254 KEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAK 313
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
CG + A ++F +I R D+V+WNA+I G A G ++ F M QG+ PD T+ S+
Sbjct: 314 CGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSL 373
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTD 297
L A EL + Q+H I K+GL+ + +L+ +YAK +R A + M D
Sbjct: 374 LCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNAD 433
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
++S A+++ D ++E F L K M + + D + L +L A S+ +G Q+H
Sbjct: 434 LVSWNAILTACMHHDQ-AEEVFGLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVH 492
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
+A K + D +V N LID+YAK G + A + FD + + +V+SW+SLI GYA+ GYG
Sbjct: 493 CYALKTGLNCDISVTNGLIDLYAKCGSLKTARKIFDSVINPDVVSWSSLILGYAQFGYGE 552
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
EA++L+K M+ + PN VTF+ +L ACSH GL EGW+L+ M ++ I+P EH SC+
Sbjct: 553 EALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWQLYGTMEKEFGIVPTREHCSCM 612
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGAC 513
VDL AR G L A I QM P +W +L AC
Sbjct: 613 VDLLARAGCLNEAEAFIHQMAFDPDIVVWKTLLAAC 648
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 160/534 (29%), Positives = 268/534 (50%), Gaps = 25/534 (4%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L STY L+ C ++ IH H++ + +L L ++ Y K G + A+K
Sbjct: 61 LTLSTYAYLISACSYLRSLEHGRKIHDHMLKSKSHPDLTLQNHILNMYGKCGSLKDAQKV 120
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD MPERNVVSWT++I+GY+QNG NAL + ML+SGV +QFT+ S ++AC+ + +
Sbjct: 121 FDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDI 180
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
GR + + K F ++ ++AL+ +Y K I DA +F R+ +D++SW +MI G
Sbjct: 181 GLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNVIIDALDVFSRMATRDLISWGSMIAGF 240
Query: 208 AMQGFNDDSFWLFRSMMRQGMK-PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
+ G+ ++ F+ M+ QG+ P+ F GS+ A ++ Q+H + IK GL
Sbjct: 241 SQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRD 300
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
SL D+YAK G + A ++ + + D+++ A+I+GFA + +KEA F M
Sbjct: 301 VFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGD-AKEAIAFFSQMR 359
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ + D++ + +L C + + L G Q+H + K D V N L+ MYAK E+
Sbjct: 360 HQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELR 419
Query: 387 DANRAFDEM-GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
DA F+EM + +++SW +++ H E L K M P+ +T ++L A
Sbjct: 420 DAIFFFEEMRCNADLVSWNAILTACMHHDQAEEVFGLLKLMCISQHRPDYITLTNVLGAS 479
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSC-------VVDLFARRGQLESAYNMIRQMN 498
+ T + ++ N+ +C ++DL+A+ G L++A + +
Sbjct: 480 AET--------VSIEIGNQVHCYALKTGLNCDISVTNGLIDLYAKCGSLKTARKIFDSV- 530
Query: 499 IKPTASLWSA-ILGACSI-YGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAA 550
I P WS+ ILG YG +L D++P N+V + TA
Sbjct: 531 INPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKP----NHVTFVGVLTAC 580
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 182/557 (32%), Positives = 307/557 (55%), Gaps = 15/557 (2%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF-D 89
+T ++ LQ K + IH++++ NG+ ++ T +I Y+K + A F D
Sbjct: 38 TTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSD 97
Query: 90 RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG 149
E NV ++ A+ISG+ NG+ E + M GV ++FT+ A++AC + +
Sbjct: 98 PTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEI-- 155
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
+ I G + K ++F+ SAL++ Y K G +E A + FE + +DVV WNAM+ G A
Sbjct: 156 -KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQ 214
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLESSN 267
G + FR M + + P FT+ +L A +G + +I IH +K+G +S
Sbjct: 215 IGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRI--IHGFAMKMGYDSGV 272
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
++ SLID+Y K I A +++ M + DI S +++S + +H L M+
Sbjct: 273 AVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDG-TLRLLDRMLG 331
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAF------KYQSSYDAAVGNALIDMYAK 381
+ D V + +L C+++A+L GR+IH + + D + NA+IDMYAK
Sbjct: 332 AGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAK 391
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
G + DA+ F+ M +K+V SW +I GY HGYG+EA+E++ +M + P++VTF+ +
Sbjct: 392 CGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGV 451
Query: 442 LFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
L ACSH G +G M +KY + P EH++CV+D+ R GQL+ AY + M I+
Sbjct: 452 LSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEA 511
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRK 561
+W A+L AC ++ + L E+AA+ +F++EPE +YV++SN+Y A G ++ + R
Sbjct: 512 NPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRH 571
Query: 562 LMEERSLRKNPGYSFLQ 578
M ++++RK PG S+++
Sbjct: 572 TMRQQNVRKTPGCSWIE 588
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 166/469 (35%), Positives = 265/469 (56%), Gaps = 6/469 (1%)
Query: 114 NALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALL 173
+A+ V +M R GV A+ TYS ++ C ++ G+ + I + F+ + L+
Sbjct: 268 SAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILI 327
Query: 174 DLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCF 233
++Y K +E+A +LF+++ ++VVSW MI + ND + L M R G+ P+ F
Sbjct: 328 NMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMF 387
Query: 234 TLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
T S+LRA L + Q+H I+K+GLES + +LIDVY+K G + A +++R M
Sbjct: 388 TFSSVLRACE---RLYDLKQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREM 444
Query: 294 LKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG 353
+ D + ++I+ FA+ + EA L+K M D L +L C +++ L LG
Sbjct: 445 MTGDSVVWNSIIAAFAQHSD-GDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELG 503
Query: 354 RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKH 413
RQ H K+ D + NAL+DMY K G + DA F+ M K+VISW+++IAG A++
Sbjct: 504 RQAHVHVLKFDQ--DLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQN 561
Query: 414 GYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEH 473
G+ EA+ L++ MK +G PN +T L +LFACSH GL EGW F M N Y I P EH
Sbjct: 562 GFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREH 621
Query: 474 FSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDME 533
+ C++DL R +L+ +I +MN +P W +L AC N L AA+ + ++
Sbjct: 622 YGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYAAKEILKLD 681
Query: 534 PEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
P+ + YV+LSNIY + W++ + R+ M++R +RK PG S+++ +K+
Sbjct: 682 PQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNKQ 730
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/387 (31%), Positives = 208/387 (53%), Gaps = 20/387 (5%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY L++ C+ A R+ +H HI +NGY L+ +I Y K + A+ F
Sbjct: 284 DSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQVLF 343
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D+MPERNVVSWT MIS Y+ ++ A+ + + M R GV N FT+SS LRAC R+ L
Sbjct: 344 DKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDL- 402
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
+ + I K ++FV+SAL+D+Y+K G + +A +F + D V WN++I A
Sbjct: 403 --KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFA 460
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGLESS 266
D++ L++SM R G D TL S+LRA S+ +EL + + +H L +
Sbjct: 461 QHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVH----VLKFDQD 516
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
L +L+D+Y K GS+ A ++ M K D+IS + +I+G A+ + S EA +LF+ M
Sbjct: 517 LILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQ-NGFSMEALNLFESMK 575
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS-YDAAVG----NALIDMYAK 381
++ + + + +L C++ +N G + F+ ++ Y G ++D+ +
Sbjct: 576 VQGPKPNHITILGVLFACSHAGLVNEG----WYYFRSMNNLYGIDPGREHYGCMLDLLGR 631
Query: 382 SGEIADANRAFDEMG-DKNVISWTSLI 407
+ ++ D + EM + +V++W +L+
Sbjct: 632 AEKLDDMVKLIHEMNCEPDVVTWRTLL 658
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 174/550 (31%), Positives = 300/550 (54%), Gaps = 5/550 (0%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
STY S+ + C A + +H H + + + + + T + YAK + A K F+
Sbjct: 240 STYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNT 299
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+P S+ A+I GYA+ AL +F ++ R+ + ++ + S AL AC+ ++ G
Sbjct: 300 LPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEG 359
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ G K N+ V + +LD+Y KCG + +A +F+ +ER+D VSWNA+I
Sbjct: 360 IQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQN 419
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
+ LF SM+R M+PD FT GS+++A G L +IH I+K G+ +
Sbjct: 420 EEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVG 479
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
+L+D+Y K G + A +++ + + +S ++ISGF+ S+ A F M+ +M
Sbjct: 480 SALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFS-SQKQSENAQRYFSQML--EM 536
Query: 331 GI--DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
G+ D+ +L++CAN+A++ LG+QIHA K D + + L+DMY+K G + D+
Sbjct: 537 GVIPDNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDS 596
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
F++ ++ ++W+++I YA HG+G +AI+L+++M+ + PN F+S+L AC+H
Sbjct: 597 RLMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHM 656
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
G +G F M + Y + P EH+SC+VDL R Q+ A +I M+ + +W
Sbjct: 657 GYVDKGLHYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRT 716
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L C + GN + E A +L ++P+ S YV+L+N+Y G W K R +M+ L
Sbjct: 717 LLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYANVGMWGEVAKIRSIMKNCKL 776
Query: 569 RKNPGYSFLQ 578
+K PG S+++
Sbjct: 777 KKEPGCSWIE 786
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 144/521 (27%), Positives = 264/521 (50%), Gaps = 13/521 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D +T+ +L+ C + +H I G+E+++ + ++ Y+K + A + F
Sbjct: 137 DYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIF 196
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
MPERN+V W+A+I+GY QN L +F ML+ G+ +Q TY+S R+CA + +
Sbjct: 197 REMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFK 256
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G + G K F + + +A LD+YAKC + DAW +F + S+NA+I G A
Sbjct: 257 LGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYA 316
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTL-GSILRASVGGIELMKISQIHDLIIKLGLESSN 267
Q + +F+S+ R + D +L G++ SV L I Q+H L +K GL +
Sbjct: 317 RQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGI-QLHGLAVKCGLGFNI 375
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ +++D+Y K G++ A ++ M + D +S A+I+ +++ K LF M+
Sbjct: 376 CVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVK-TLSLFVSMLR 434
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
M DD ++ CA +LN G +IH K D VG+AL+DMY K G + +
Sbjct: 435 STMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLME 494
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A + D + +K +SW S+I+G++ A + +M G++P++ T+ ++L C++
Sbjct: 495 AEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCAN 554
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
G ++ ++ K + S +VD++++ G ++ + M + + + WS
Sbjct: 555 MATIELGKQIHAQIL-KLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVT-WS 612
Query: 508 AILGACSIYGNTSLGELAAR-----NLFDMEPEKSVNYVVL 543
A++ A + +G+ GE A + L +++P ++ VL
Sbjct: 613 AMICAYAYHGH---GEQAIKLFEEMQLLNVKPNHTIFISVL 650
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 147/608 (24%), Positives = 280/608 (46%), Gaps = 76/608 (12%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGY----------------ESNLHLSTKV---- 71
T+ +LQ C + KA HA +I + SN++ + KV
Sbjct: 8 TFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRM 67
Query: 72 -----------IIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
I YA++G++ A+ FD MPER+VVSW +++S Y NG + ++ +F
Sbjct: 68 PHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKC 179
M + + T+S L+AC+ + G + +IQ G F ++ SAL+D+Y+KC
Sbjct: 128 RMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMG-FENDVVTGSALVDMYSKC 186
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
++ A+ +F + +++V W+A+I G + LF+ M++ GM T S+
Sbjct: 187 KKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVF 246
Query: 240 RASVGGIELMKI-SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
R S G+ K+ +Q+H +K + + + +D+YAK + A++++ ++
Sbjct: 247 R-SCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPR 305
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
S A+I G+AR D K A ++F+ + + D++ L L C+ + G Q+H
Sbjct: 306 QSYNAIIVGYARQDQGLK-ALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHG 364
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHE 418
A K ++ V N ++DMY K G + +A FD+M ++ +SW ++IA + ++ +
Sbjct: 365 LAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVK 424
Query: 419 AIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWEL------------------FTD 460
+ L+ M M P+D T+ S++ AC+ G E+ D
Sbjct: 425 TLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVD 484
Query: 461 MINKYRILPRAEH------------FSCVVDLFARRGQLESA---YNMIRQMNIKPTASL 505
M K +L AE ++ ++ F+ + Q E+A ++ + +M + P
Sbjct: 485 MYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFT 544
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYV--VLSNIYTAAGAWDNARKTRKLM 563
++ +L C+ LG+ + + V Y+ L ++Y+ G ++R LM
Sbjct: 545 YATVLDVCANMATIELGKQIHAQILKLNLHSDV-YIASTLVDMYSKCGNMQDSR----LM 599
Query: 564 EERSLRKN 571
E++ +++
Sbjct: 600 FEKTPKRD 607
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 201/417 (48%), Gaps = 42/417 (10%)
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE 190
+FT+S L+ C+ ++ L G+ + FV ++V + L+ Y K + A+ +F+
Sbjct: 6 KFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFD 65
Query: 191 RIERKDVVSWNAMIGGLA-------------------------------MQGFNDDSFWL 219
R+ +DV+SWN MI G A G N S +
Sbjct: 66 RMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEI 125
Query: 220 FRSMMRQGMKPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLGLESSNKLTGSLIDVYA 278
F M + D T +L+A GIE + Q+H L I++G E+ +L+D+Y+
Sbjct: 126 FVRMRSLKIPHDYATFSVVLKA-CSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYS 184
Query: 279 KYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILC 338
K + A++++R M + +++ +A+I+G+ ++D E LFKDM+ MG+
Sbjct: 185 KCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFI-EGLKLFKDMLKVGMGVSQSTYA 243
Query: 339 LMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK 398
+ CA +++ LG Q+H A K +YD+ +G A +DMYAK ++DA + F+ + +
Sbjct: 244 SVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNP 303
Query: 399 NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELF 458
S+ ++I GYA+ G +A+E+++ ++ + ++++ L ACS EG +L
Sbjct: 304 PRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLH 363
Query: 459 TDMIN---KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
+ + I + ++D++ + G L A + M + S W+AI+ A
Sbjct: 364 GLAVKCGLGFNICVA----NTILDMYGKCGALVEACTIFDDMERRDAVS-WNAIIAA 415
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 175/558 (31%), Positives = 314/558 (56%), Gaps = 7/558 (1%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
DT +D S+L+ C + +H ++ NG+ ++ + +I+ Y++VG + A
Sbjct: 119 DTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALA 178
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
R FD++ ++VVSW+ MI Y ++G + AL + M V+ ++ S A +
Sbjct: 179 RLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAEL 238
Query: 145 RWLQGGRMIQGSIQK-GRFVEN-LFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
L+ G+ + + + G+ ++ + + +AL+D+Y KC + A +F+ + + ++SW A
Sbjct: 239 ADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTA 298
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIK 260
MI ++ LF M+ +GM P+ T+ S+++ + G +EL K+ +H ++
Sbjct: 299 MIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKL--LHAFTLR 356
Query: 261 LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFD 320
G S L + ID+Y K G +RSA ++ S D++ +A+IS +A++ N EAFD
Sbjct: 357 NGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQN-NCIDEAFD 415
Query: 321 LFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYA 380
+F M + ++ + +L ICA SL +G+ IH++ K D + + +DMYA
Sbjct: 416 IFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYA 475
Query: 381 KSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
G+I A+R F E D+++ W ++I+G+A HG+G A+EL+++M+ G+ PND+TF+
Sbjct: 476 NCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIG 535
Query: 441 LLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIK 500
L ACSH+GL EG LF M++++ P+ EH+ C+VDL R G L+ A+ +I+ M ++
Sbjct: 536 ALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMR 595
Query: 501 PTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTR 560
P +++ + L AC ++ N LGE AA+ +EP KS V++SNIY +A W + R
Sbjct: 596 PNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIR 655
Query: 561 KLMEERSLRKNPGYSFLQ 578
+ M++ + K PG S ++
Sbjct: 656 RAMKDEGIVKEPGVSSIE 673
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 222/441 (50%), Gaps = 8/441 (1%)
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
N + +I+ Y +N +A +++ M + + F S L+AC + G+ +
Sbjct: 88 NAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVH 147
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND 214
G + K F ++FV +AL+ +Y++ G + A +LF++IE KDVVSW+ MI G D
Sbjct: 148 GFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLD 207
Query: 215 DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGL--ESSNKLTGS 272
++ L R M +KP + SI +L +H +++ G +S L +
Sbjct: 208 EALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTA 267
Query: 273 LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI 332
LID+Y K ++ A +++ + K IIS TA+I+ + +N E LF M+ + M
Sbjct: 268 LIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNN-LNEGVRLFVKMLGEGMFP 326
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAF 392
+++ + ++ C +L LG+ +HAF + + + A IDMY K G++ A F
Sbjct: 327 NEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVF 386
Query: 393 DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTC 452
D K+++ W+++I+ YA++ EA +++ M G+ PN+ T +SLL C+ G +
Sbjct: 387 DSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAG-SL 445
Query: 453 EGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
E + I+K I + VD++A G +++A+ + + + S+W+A++
Sbjct: 446 EMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDI-SMWNAMISG 504
Query: 513 CSIYGNTSLGELAARNLFDME 533
+++G+ GE A +ME
Sbjct: 505 FAMHGH---GEAALELFEEME 522
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 162/449 (36%), Positives = 275/449 (61%), Gaps = 7/449 (1%)
Query: 134 YSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE 193
Y+ L C R ++ G+ + + K ++ +++ + L+ LY KC + A +F+ +
Sbjct: 13 YNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMR 72
Query: 194 RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG--GIELMKI 251
++VVSW AMI G + +GF ++ LF M+R +P+ FT ++L + G G EL +
Sbjct: 73 ERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGR- 131
Query: 252 SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD 311
QIH I K E+ + SL+D+YAK G I A ++ + + D++SCTA+ISG+A+
Sbjct: 132 -QIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQL 190
Query: 312 DNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAV 371
+EA +LF + + M + V +L + +A+L+ G+Q+H+ + + + +
Sbjct: 191 -GLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVL 249
Query: 372 GNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGM 431
N+LIDMY+K G + A + F+ M + VISW +++ GY+KHG G E ++L+K M+ E
Sbjct: 250 QNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENK 309
Query: 432 V-PNDVTFLSLLFACSHTGLTCEGWELFTDMINKY-RILPRAEHFSCVVDLFARRGQLES 489
V P+ VTFL++L CSH GL +G E+F +M+N I EH+ CV+DL R G++E
Sbjct: 310 VKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEE 369
Query: 490 AYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTA 549
A+ +I++M +PTA++W ++LGAC ++ NT++GE L ++EPE + NYV+LSN+Y +
Sbjct: 370 AFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYAS 429
Query: 550 AGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
AG W++ R R+LM E+++ K PG S+++
Sbjct: 430 AGRWEDVRNVRELMMEKAVIKEPGRSWIE 458
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 133/396 (33%), Positives = 211/396 (53%), Gaps = 11/396 (2%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS 83
P+ D Y LL C++K+A R+ +HAH+I Y ++LST++II Y K +
Sbjct: 6 PEIKFD--GYNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGC 63
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
AR FD M ERNVVSWTAMISGY+Q G+ AL +F MLRS N+FT+++ L +C
Sbjct: 64 ARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTG 123
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
+ GR I I K + ++FV S+LLD+YAK G I +A +FE + +DVVS A+
Sbjct: 124 FSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAI 183
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGL 263
I G A G ++++ LF + R+GM + T S+L A G L Q+H +++ L
Sbjct: 184 ISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCEL 243
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSK--EAFDL 321
L SLID+Y+K G++ A +++ +M +IS A++ G+++ H K E L
Sbjct: 244 PFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSK---HGKGIEVVKL 300
Query: 322 FKDMILK-KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN--ALIDM 378
FK M + K+ D V +L+ C++ + G ++ +A + + +ID+
Sbjct: 301 FKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDL 360
Query: 379 YAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKH 413
++G + +A +M + W SL+ H
Sbjct: 361 LGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVH 396
>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
Length = 960
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 178/556 (32%), Positives = 313/556 (56%), Gaps = 5/556 (0%)
Query: 30 PSTY--MSLLQFCIDKKAERQAHLIHAHII-TNGYESNLHLSTKVIIFYAKVGDVLSARK 86
P++Y +S L C + IHA ++ ++ + S L++ +I Y + G + A +
Sbjct: 282 PNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAER 341
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
+M +VV+W ++I GY QN + AL FS M+ +G ++++ + +S + A R+
Sbjct: 342 ILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSN 401
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
L G + + K + NL V + L+D+Y+KC F R+ KD++SW +I G
Sbjct: 402 LLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAG 461
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
A + ++ LFR + ++ M+ D LGSILRAS ++ + +IH I++ GL +
Sbjct: 462 YAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDT 521
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ L+DVY K ++ A +++ S+ D++S T++IS A + N S EA +LF+ M+
Sbjct: 522 -VIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNES-EAVELFRRMV 579
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ D V L +L+ A++++LN GR+IH + + + ++ A++DMYA G++
Sbjct: 580 ETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQ 639
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A FD + K ++ +TS+I Y HG G A+EL+ KM+HE + P+ ++FL+LL+ACS
Sbjct: 640 SAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACS 699
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
H GL EG M ++Y + P EH+ C+VD+ R + A+ ++ M +PTA +W
Sbjct: 700 HAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVW 759
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
A+L AC + +GE+AA+ L ++EP+ N V++SN++ G W++ K R M+
Sbjct: 760 CALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKAS 819
Query: 567 SLRKNPGYSFLQSSKK 582
+ K+PG S+++ K
Sbjct: 820 GMEKHPGCSWIEMDGK 835
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 161/557 (28%), Positives = 286/557 (51%), Gaps = 17/557 (3%)
Query: 16 ALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFY 75
AL +++ L S++ +LL+ C + R +H+ ++ GY S + ++ Y
Sbjct: 168 ALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMY 227
Query: 76 AKVGDVLSARKAFDRMPER-NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
AK D+ +AR+ FD E+ + V W +++S Y+ +G L +F M +G N +T
Sbjct: 228 AKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTI 287
Query: 135 SSALRACARMRWLQGGRMIQGSIQKGR-FVENLFVKSALLDLYAKCGWIEDAWILFERIE 193
SAL AC + + G+ I S+ K L+V +AL+ +Y +CG + A + ++
Sbjct: 288 VSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN 347
Query: 194 RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ 253
DVV+WN++I G ++ F M+ G K D ++ SI+ AS L+ +
Sbjct: 348 NADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGME 407
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN 313
+H +IK G +S+ ++ +LID+Y+K + + M D+IS T +I+G+A++D
Sbjct: 408 LHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDC 467
Query: 314 HSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN 373
H EA +LF+D+ K+M ID++IL +L + + S+ + ++IH + + D + N
Sbjct: 468 HV-EALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILR-KGLLDTVIQN 525
Query: 374 ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP 433
L+D+Y K + A R F+ + K+V+SWTS+I+ A +G EA+EL+++M G+
Sbjct: 526 ELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSA 585
Query: 434 NDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNM 493
+ V L +L A + +G E+ ++ K L + + VVD++A G L+SA +
Sbjct: 586 DSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVA-VVDMYACCGDLQSAKAV 644
Query: 494 IRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD------MEPEKSVNYVVLSNIY 547
++ K S I + YG G+ AA LFD + P+ ++++ L
Sbjct: 645 FDRIERKGLLQYTSMI----NAYGMHGCGK-AAVELFDKMRHENVSPDH-ISFLALLYAC 698
Query: 548 TAAGAWDNARKTRKLME 564
+ AG D R K+ME
Sbjct: 699 SHAGLLDEGRGFLKIME 715
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 126/415 (30%), Positives = 218/415 (52%), Gaps = 6/415 (1%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITN--GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPE 93
+L+ C ++A Q +H+ I +E + L+ K++ Y K G + A K FD MP+
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDF-LAGKLVFMYGKCGSLDDAEKVFDEMPD 144
Query: 94 RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMI 153
R +W MI Y NG +AL ++ M GV ++ + L+ACA++R ++ G +
Sbjct: 145 RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSEL 204
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERK-DVVSWNAMIGGLAMQGF 212
+ K + F+ +AL+ +YAK + A LF+ + K D V WN+++ + G
Sbjct: 205 HSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGK 264
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN-KLTG 271
+ ++ LFR M G P+ +T+ S L A G +IH ++K SS +
Sbjct: 265 SLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCN 324
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
+LI +Y + G + A ++ R M D+++ +LI G+ ++ + KEA + F DMI
Sbjct: 325 ALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMY-KEALEFFSDMIAAGHK 383
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
D+V + ++ +++L G ++HA+ K+ + VGN LIDMY+K RA
Sbjct: 384 SDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRA 443
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
F M DK++ISWT++IAGYA++ EA+EL++ + + M +++ S+L A S
Sbjct: 444 FLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498
>gi|449450916|ref|XP_004143208.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 616
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 175/528 (33%), Positives = 291/528 (55%), Gaps = 3/528 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H+ II G+ N ++ T ++ Y K + A K FD M +VV+W ++++GY Q GY
Sbjct: 90 VHSTIIKLGFSLNPYIFTALVDMYGKCWSISDAHKVFDEMSCPSVVTWNSLVTGYLQAGY 149
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
A+ +F ML+ G+ F+ S L C++++ G + K RF N+ V +
Sbjct: 150 PLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKGDLGSQLHAMSLKLRFSSNVVVGTG 209
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+D+Y+KC ++D+ +F+ + K+V +W +MI G A ++ L R M+ +KP+
Sbjct: 210 LIDMYSKCCNLQDSRRVFDIMLNKNVFTWTSMISGYARNQLPHEAMILMREMLHLNLKPN 269
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAK-YGSIRSAYQLY 290
T S+L + K QIH II G ES+N + +L+ Y++ GS+ ++
Sbjct: 270 GMTYNSLLSSFSCPRHFDKCKQIHCRIITEGYESNNYIAVTLVTAYSECCGSLEDYRKVC 329
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
++ +D IS A+I+GF + +EA + F M +K +D + ++L
Sbjct: 330 SNIRMSDQISWNAVIAGFT-NLGIGEEALECFIQMRREKFDVDFFTFTSIFKAIGMTSAL 388
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
G+QIH +K + + +V N L+ MYA+SG I D+ F M + ++ISW SL++G
Sbjct: 389 EEGKQIHGLVYKTGYTLNLSVQNGLVSMYARSGAIRDSKMVFSMMNEHDLISWNSLLSGC 448
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRI-LP 469
A HG G EAI+L++KM+ + P++ +FL++L ACSH GL +G E F M N + P
Sbjct: 449 AYHGCGEEAIDLFEKMRRTCIKPDNTSFLAVLTACSHVGLLDKGLEYFKLMRNSELVEPP 508
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
+ EH++ +VDLF R G+L A I + I+P S++ A+L AC I+GN + A+ L
Sbjct: 509 KLEHYATLVDLFGRAGKLYEAEAFIESIPIEPGISIYKALLSACLIHGNKDIAIRTAKKL 568
Query: 530 FDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
++ P Y++LSN G WD+A R+LM R ++K PG+S++
Sbjct: 569 LELYPYDPATYIMLSNALGRDGYWDDAASIRRLMSNRGVKKEPGFSWM 616
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 219/461 (47%), Gaps = 21/461 (4%)
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
+LR G + + C + L G + +I K F N ++ +AL+D+Y KC
Sbjct: 59 LLRHGSPPTPPILTKTISICTKSTLLDFGIQVHSTIIKLGFSLNPYIFTALVDMYGKCWS 118
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
I DA +F+ + VV+WN+++ G G+ + LF M+++G++P F+L L
Sbjct: 119 ISDAHKVFDEMSCPSVVTWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPFSLSGGL-- 176
Query: 242 SVGGIELMK---ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
VG +L K SQ+H + +KL S+ + LID+Y+K +++ + +++ ML ++
Sbjct: 177 -VGCSQLQKGDLGSQLHAMSLKLRFSSNVVVGTGLIDMYSKCCNLQDSRRVFDIMLNKNV 235
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
+ T++ISG+AR + EA L ++M+ + + + +L+ + + +QIH
Sbjct: 236 FTWTSMISGYAR-NQLPHEAMILMREMLHLNLKPNGMTYNSLLSSFSCPRHFDKCKQIHC 294
Query: 359 FAFKYQSSYDAAVGNALIDMYAK-SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
+ + L+ Y++ G + D + + + ISW ++IAG+ G G
Sbjct: 295 RIITEGYESNNYIAVTLVTAYSECCGSLEDYRKVCSNIRMSDQISWNAVIAGFTNLGIGE 354
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
EA+E + +M+ E + TF S+ A T EG ++ ++ K + +
Sbjct: 355 EALECFIQMRREKFDVDFFTFTSIFKAIGMTSALEEGKQIH-GLVYKTGYTLNLSVQNGL 413
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD------ 531
V ++AR G + + + MN S W+++L C+ +G GE A +LF+
Sbjct: 414 VSMYARSGAIRDSKMVFSMMNEHDLIS-WNSLLSGCAYHG---CGE-EAIDLFEKMRRTC 468
Query: 532 MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNP 572
++P+ + VL+ + G D + KLM L + P
Sbjct: 469 IKPDNTSFLAVLTAC-SHVGLLDKGLEYFKLMRNSELVEPP 508
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 91/190 (47%), Gaps = 3/190 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D T+ S+ + A + IH + GY NL + ++ YA+ G + ++
Sbjct: 370 VDFFTFTSIFKAIGMTSALEEGKQIHGLVYKTGYTLNLSVQNGLVSMYARSGAIRDSKMV 429
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F M E +++SW +++SG A +G E A+ +F M R+ ++ + ++ + L AC+ + L
Sbjct: 430 FSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRTCIKPDNTSFLAVLTACSHVGLL 489
Query: 148 QGGRMIQGSIQKGRFVE--NLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS-WNAMI 204
G ++ VE L + L+DL+ + G + +A E I + +S + A++
Sbjct: 490 DKGLEYFKLMRNSELVEPPKLEHYATLVDLFGRAGKLYEAEAFIESIPIEPGISIYKALL 549
Query: 205 GGLAMQGFND 214
+ G D
Sbjct: 550 SACLIHGNKD 559
>gi|15240591|ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g13270, chloroplastic; Flags: Precursor
gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis thaliana]
gi|332004490|gb|AED91873.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 752
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 179/552 (32%), Positives = 291/552 (52%), Gaps = 2/552 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
+Y L + C + ++ L+H + ++ L V+ Y + + A K FD M
Sbjct: 85 SYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEM 144
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
E N VS T MIS YA+ G + A+ +FS ML SG + Y++ L++ R L GR
Sbjct: 145 SELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGR 204
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I + + N +++ ++++Y KCGW+ A +F+++ K V+ ++ G G
Sbjct: 205 QIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAG 264
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
D+ LF ++ +G++ D F +L+A EL QIH + KLGLES +
Sbjct: 265 RARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGT 324
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
L+D Y K S SA + ++ + + + +S +A+ISG+ + +EA FK + K
Sbjct: 325 PLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQF-EEAVKTFKSLRSKNAS 383
Query: 332 I-DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
I + + C+ +A N+G Q+HA A K +ALI MY+K G + DAN
Sbjct: 384 ILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANE 443
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
F+ M + ++++WT+ I+G+A +G EA+ L++KM GM PN VTF+++L ACSH GL
Sbjct: 444 VFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGL 503
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
+G M+ KY + P +H+ C++D++AR G L+ A ++ M +P A W L
Sbjct: 504 VEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFL 563
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
C + N LGE+A L ++PE + YV+ N+YT AG W+ A + KLM ER L+K
Sbjct: 564 SGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKK 623
Query: 571 NPGYSFLQSSKK 582
S++Q K
Sbjct: 624 ELSCSWIQEKGK 635
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/457 (26%), Positives = 224/457 (49%), Gaps = 15/457 (3%)
Query: 114 NALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALL 173
A M ++GV + ++Y AC +R L GR++ ++ G ++ +++ +L
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVL 125
Query: 174 DLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCF 233
+Y +C +EDA LF+ + + VS MI A QG D + LF M+ G KP
Sbjct: 126 QMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSS 185
Query: 234 TLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
++L++ V L QIH +I+ GL S+ + ++++Y K G + A +++ M
Sbjct: 186 MYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQM 245
Query: 294 LKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG 353
++CT L+ G+ + +++A LF D++ + + D + ++L CA++ LNLG
Sbjct: 246 AVKKPVACTGLMVGYTQ-AGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLG 304
Query: 354 RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKH 413
+QIHA K + +VG L+D Y K A RAF E+ + N +SW+++I+GY +
Sbjct: 305 KQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQM 364
Query: 414 GYGHEAIELYKKMKHE-GMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAE 472
EA++ +K ++ + + N T+ S+ ACS G ++ D I + I +
Sbjct: 365 SQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYG 424
Query: 473 HFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD- 531
S ++ ++++ G L+ A + M+ P W+A + + YGN S A LF+
Sbjct: 425 E-SALITMYSKCGCLDDANEVFESMD-NPDIVAWTAFISGHAYYGNAS----EALRLFEK 478
Query: 532 -----MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
M+P SV ++ + + AG + + M
Sbjct: 479 MVSCGMKP-NSVTFIAVLTACSHAGLVEQGKHCLDTM 514
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 189/386 (48%), Gaps = 4/386 (1%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
S Y +LL+ ++ +A IHAH+I G SN + T ++ Y K G ++ A++ FD+
Sbjct: 185 SMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQ 244
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
M + V+ T ++ GY Q G +AL +F ++ GV + F +S L+ACA + L G
Sbjct: 245 MAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLG 304
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ I + K + V + L+D Y KC E A F+ I + VSW+A+I G
Sbjct: 305 KQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQM 364
Query: 211 GFNDDSFWLFRSMMRQGMKP-DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
+++ F+S+ + + FT SI +A + Q+H IK L S
Sbjct: 365 SQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYG 424
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+LI +Y+K G + A +++ SM DI++ TA ISG A N S EA LF+ M+
Sbjct: 425 ESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNAS-EALRLFEKMVSCG 483
Query: 330 MGIDDVILCLMLNICANVASLNLGRQ-IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
M + V +L C++ + G+ + KY + + +ID+YA+SG + +A
Sbjct: 484 MKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEA 543
Query: 389 NRAFDEMG-DKNVISWTSLIAGYAKH 413
+ M + + +SW ++G H
Sbjct: 544 LKFMKNMPFEPDAMSWKCFLSGCWTH 569
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 150/304 (49%), Gaps = 5/304 (1%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ G+ + ALK L D + +L+ C + IHA + G ES +
Sbjct: 262 QAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVS 321
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML-RS 125
+ T ++ FY K SA +AF + E N VSW+A+ISGY Q E A+ F ++ ++
Sbjct: 322 VGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKN 381
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
N FTY+S +AC+ + G + K + + + +SAL+ +Y+KCG ++DA
Sbjct: 382 ASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDA 441
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVG 244
+FE ++ D+V+W A I G A G ++ LF M+ GMKP+ T ++L A S
Sbjct: 442 NEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHA 501
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTA 303
G+ + ++ K + + +ID+YA+ G + A + ++M + D +S
Sbjct: 502 GLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKC 561
Query: 304 LISG 307
+SG
Sbjct: 562 FLSG 565
>gi|242064134|ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
gi|241933187|gb|EES06332.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
Length = 807
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 194/584 (33%), Positives = 298/584 (51%), Gaps = 54/584 (9%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDK--------KAERQAHLIHAHIIT 58
++G + AL+ +S +DP S+L C +A R A IHA ++
Sbjct: 220 QSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSIHALVVR 279
Query: 59 NGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLV 118
G++S+ H+ +I YAK + A K F+ M ++VSW +++GY Q G E AL V
Sbjct: 280 KGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQLGCYERALEV 339
Query: 119 FSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
M SG N+ TYS+ L +C + R + R
Sbjct: 340 LDLMQESGFEPNEVTYSNMLASCIKARDVPSARA-------------------------- 373
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
+F++I + V +WN ++ G + + D+ LFR M Q ++PD TL I
Sbjct: 374 ---------MFDKISKPSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVI 424
Query: 239 LR--ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT 296
L + +G +EL K Q+H +KL L + + LID+Y+K G + A ++ M +
Sbjct: 425 LSTCSRLGILELGK--QVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTER 482
Query: 297 DIISCTALISGFARDDNHS--KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGR 354
D++ ++ISG A HS +EAFD FK M M + M+N CA ++S+ GR
Sbjct: 483 DVVCWNSMISGLAI---HSLNEEAFDFFKQMRENGMFPTESSYASMINSCARLSSIPQGR 539
Query: 355 QIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG 414
QIHA K + VG++LIDMYAK G + DA F+ M KN+++W +I GYA++G
Sbjct: 540 QIHAQVLKDGYDQNVYVGSSLIDMYAKCGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNG 599
Query: 415 YGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF 474
+G +A+EL++ M P+ VTF+++L CSH+GL E F M + Y I P EH+
Sbjct: 600 FGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAIAYFNSMESNYGIRPLVEHY 659
Query: 475 SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEP 534
+C++D R G+ +I +M K A LW +L AC ++ N LGE AA++LF ++P
Sbjct: 660 TCLIDALGRAGRFAEVVAVIDKMPYKDDAILWEVLLAACVVHHNAELGEFAAKHLFRLDP 719
Query: 535 EKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+ YV+LSNIY G +A R LM R + K GYS++
Sbjct: 720 KNPSPYVLLSNIYATLGRHGDASAVRALMSSRGVVKGRGYSWVN 763
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 152/571 (26%), Positives = 262/571 (45%), Gaps = 84/571 (14%)
Query: 64 NLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML 123
N++ I + GD+ +AR RMP+RN VSW +I+ A++ AL ++ ML
Sbjct: 75 NVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGML 134
Query: 124 RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIE 183
+ G+ FT +S L AC + L GR G K N FV++ LL +Y KCG +
Sbjct: 135 QEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVA 194
Query: 184 DAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL---- 239
DA LF+ + + VS+ AM+GGLA G DD+ LF M R ++ D + S+L
Sbjct: 195 DAVRLFDWMSSPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACA 254
Query: 240 RASVGGIEL---MKISQ-IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLK 295
+A G + ++++Q IH L+++ G +S + SLID+YAK + A +++ SM
Sbjct: 255 QACAGDYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSS 314
Query: 296 TDIISCTALISGF-------------------------------------ARDDNHSKEA 318
I+S L++G+ ARD ++
Sbjct: 315 VSIVSWNILVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSARAM 374
Query: 319 FD----------------------------LFKDMILKKMGIDDVILCLMLNICANVASL 350
FD LF+ M + + D L ++L+ C+ + L
Sbjct: 375 FDKISKPSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGIL 434
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
LG+Q+H+ + K D V + LIDMY+K G++ A F+ M +++V+ W S+I+G
Sbjct: 435 ELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTERDVVCWNSMISGL 494
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
A H EA + +K+M+ GM P + ++ S++ +C+ +G ++ ++ K
Sbjct: 495 AIHSLNEEAFDFFKQMRENGMFPTESSYASMINSCARLSSIPQGRQIHAQVL-KDGYDQN 553
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
S ++D++A+ G ++ A M +K + W+ ++ Y GE A LF
Sbjct: 554 VYVGSSLIDMYAKCGNMDDARLFFNCMIVKNIVA-WNEMIHG---YAQNGFGEKAVE-LF 608
Query: 531 DM-----EPEKSVNYVVLSNIYTAAGAWDNA 556
+ + SV ++ + + +G D A
Sbjct: 609 EYMLTTKQKPDSVTFIAVLTGCSHSGLVDEA 639
>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
Length = 1033
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 173/534 (32%), Positives = 296/534 (55%), Gaps = 1/534 (0%)
Query: 49 AHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQ 108
L+H + +G +++ +S+ ++ Y KVG F+ M RNVVSWTA+I G
Sbjct: 170 GELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRNVVSWTAVIVGLVH 229
Query: 109 NGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFV 168
G + L FS M RS V + T++ AL+A A L G+ I K F E +V
Sbjct: 230 AGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQGFNETAYV 289
Query: 169 KSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGM 228
+ L +Y+KC + LF ++ DVVSW +I G + + F+ M + +
Sbjct: 290 VNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDV 349
Query: 229 KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQ 288
P+ +T S++ A QIH ++LGL + ++ S+I +Y+K G ++ A
Sbjct: 350 SPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASL 409
Query: 289 LYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
++ M + DIIS + +IS + + +H+KEAF+ M + ++ L +L++C ++A
Sbjct: 410 VFDGMTRKDIISWSTIISVYCQG-SHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMA 468
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA 408
L G+Q+HA+A ++ V +ALI MY++SG + +A++ FD + + +++SWT++I
Sbjct: 469 LLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMIN 528
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
GYA+HGY EAI L++ + G++P+ VTF+ +L AC+H GL G+ + M N+Y+I
Sbjct: 529 GYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVDLGFYYYKLMTNEYQIA 588
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARN 528
P EH+ C++DL R G+L A +M+R M +WS +L AC +G+ AA
Sbjct: 589 PSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQ 648
Query: 529 LFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+ + P + ++ L+NIY+A+G + A RKLM+ + + K PG+S++ S+ +
Sbjct: 649 MLRLHPNSAGAHITLANIYSASGRREEAAHVRKLMKSKGVIKEPGWSWINSNDQ 702
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 142/503 (28%), Positives = 237/503 (47%), Gaps = 19/503 (3%)
Query: 20 SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVG 79
+L+ P + P T K E++A A+ + N E N L + K+G
Sbjct: 46 NLNPPLNYVYPGTATECRDMIWQGKPEQRAPT--AYYVPNMPELNSQLKQLM-----KLG 98
Query: 80 DVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAM-LRSGVRANQFTYSSAL 138
+ AR F++M R+ +SWT +I+GY AL++FS M + SG++ +QF S AL
Sbjct: 99 KICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVVSVAL 158
Query: 139 RACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVV 198
+ACA + G ++ G K + ++FV SAL+D+Y K G E +FE + ++VV
Sbjct: 159 KACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRNVV 218
Query: 199 SWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLI 258
SW A+I GL G + D F M R + D T L+AS L IH
Sbjct: 219 SWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQT 278
Query: 259 IKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEA 318
IK G + + +L +Y+K +L+ M D++S T LI + + + + A
Sbjct: 279 IKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEER-A 337
Query: 319 FDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDM 378
D FK M + ++ +++ CAN+A G QIH A + +V N++I +
Sbjct: 338 LDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITL 397
Query: 379 YAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTF 438
Y+K G + +A+ FD M K++ISW+++I+ Y + + EA M EG PN+
Sbjct: 398 YSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFAL 457
Query: 439 LSLLFACSHTGLTCEGWELFTDMINKYRILPRAEH----FSCVVDLFARRGQLESAYNMI 494
S+L C L G ++ Y + +H S ++ +++R G L+ A +
Sbjct: 458 ASVLSVCGSMALLEPG-----KQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIF 512
Query: 495 RQMNIKPTASLWSAILGACSIYG 517
+ S W+A++ + +G
Sbjct: 513 DSIKNNDIVS-WTAMINGYAEHG 534
>gi|297744484|emb|CBI37746.3| unnamed protein product [Vitis vinifera]
Length = 2090
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 188/558 (33%), Positives = 308/558 (55%), Gaps = 11/558 (1%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
ST + + C A + +H +II +G+ + ++ YA D+ A + FD
Sbjct: 137 STLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDE 195
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAML-RSGVRANQFTYSSALRACARMRWLQG 149
M ER+V+SW+ MI GY Q G + AL +F M + + + T S L+ACA +
Sbjct: 196 MCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISM 255
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
GR + G + +LFV ++++D+Y+KC E A+ F + ++ VSWN++I GL
Sbjct: 256 GRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVR 315
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
+ ++ LF SM + G + D TL ++L++ ++ + IH ++I+ G E + +
Sbjct: 316 TEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFV 375
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH---SKEAFDLFKDMI 326
SLID Y+K I A++L+ + D +S +A+I+GF NH EA LF++M
Sbjct: 376 INSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGF----NHCGKPDEAIALFQEMN 431
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ + V + +L + A L + H A + + + AVG A++DMYAK GEI
Sbjct: 432 QAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIG 491
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
+ +AFD++ +KN++SW ++IA +G +A+ L +MK G+ PN VT LS+L ACS
Sbjct: 492 LSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACS 551
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM--NIKPTAS 504
H GL EG F +M+ + + P EH+SC+VD+ +R G+L SA N+I +M ++ A
Sbjct: 552 HGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMRDGAG 611
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
LW A+L AC GN+ LG AA + ++EP+ S Y + S++Y A+G W +A + R L++
Sbjct: 612 LWGALLSACRSSGNSRLGAGAAFRVLELEPQSSAGYFLASSMYAASGLWADAARMRWLVK 671
Query: 565 ERSLRKNPGYSFLQSSKK 582
R +R GYS + K
Sbjct: 672 ARGVRVVAGYSLVHVEDK 689
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 148/525 (28%), Positives = 242/525 (46%), Gaps = 30/525 (5%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L DP+ S+L+ C G++S V+ FY K G + SA
Sbjct: 47 LTDPTLVHSILKACSSLP---------------GFDSLTSTGNSVLDFYMKTGALDSALF 91
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FD M R+ VSW MI G+ G + L F N T A+ AC +
Sbjct: 92 VFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGA 151
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
++ G + G I + F++ V+++LL +YA +E A LF+ + +DV+SW+ MIGG
Sbjct: 152 MEEGLKMHGYIIRSGFLDIPSVQNSLLSMYADND-MERAEELFDEMCERDVISWSVMIGG 210
Query: 207 LAMQGFNDDSFWLFRSMMRQG-MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
G + LF M ++ D T+ S+L+A ++ +H ++I GL+
Sbjct: 211 YVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDY 270
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ S+ID+Y+K SA++ + M + +S ++ISG R + HS EA LF M
Sbjct: 271 DLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHS-EALSLFYSM 329
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
D+V L +L C + IH+ ++ + V N+LID Y+K I
Sbjct: 330 GKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLI 389
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A + FD + K+ +SW+++IAG+ G EAI L+++M PN VT LSLL A
Sbjct: 390 ELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAF 449
Query: 446 SHTG-LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQL---ESAYNMIRQMNIKP 501
S + L W + + + + ++D++A+ G++ A++ I + NI
Sbjct: 450 SVSADLKRSKWA--HGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVS 507
Query: 502 TASLWSAILGACSIYG--NTSLGELAARNLFDMEPEKSVNYVVLS 544
W A++ AC + G +L L+ L ++P VLS
Sbjct: 508 ----WGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLS 548
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 202/404 (50%), Gaps = 25/404 (6%)
Query: 9 KTGQLKQALKFSL---SCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNL 65
+TG+ K AL+ L S LD T +S+L+ C + +H +I G + +L
Sbjct: 213 QTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDL 272
Query: 66 HLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
+ +I Y+K D SA KAF+ MP RN VSW ++ISG + AL +F +M ++
Sbjct: 273 FVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKA 332
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
G RA++ T + L++C + I + + + N FV ++L+D Y+KC IE A
Sbjct: 333 GFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELA 392
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGG 245
W LF+R++ KD VSW+AMI G G D++ LF+ M + KP+ T+ S+L A
Sbjct: 393 WKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVS 452
Query: 246 IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALI 305
+L + H + I+ GL + + +++D+YAK G I + + + + + +I+S A+I
Sbjct: 453 ADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMI 512
Query: 306 S-----GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
+ G ARD A L +M L + + V +L+ C++ + G +
Sbjct: 513 AACGMNGLARD------ALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEG-----LS 561
Query: 361 FKYQSSYDAAVGNAL------IDMYAKSGEIADANRAFDEMGDK 398
F D V L +DM +++G++ A ++M ++
Sbjct: 562 FFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPER 605
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 172/521 (33%), Positives = 299/521 (57%), Gaps = 13/521 (2%)
Query: 68 STKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV 127
S ++ Y + G V A +AFD M R+V +W AM+SG +N A+ +F M+ GV
Sbjct: 107 SGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGV 166
Query: 128 RANQFTYSSALRACARMRWLQGGRMIQGSIQ----KGRFVENLFVKSALLDLYAKCGWIE 183
+ T SS L C L G R + ++ K + LFV +A++D+Y K G +E
Sbjct: 167 AGDAVTVSSVLPMCV----LLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLE 222
Query: 184 DAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV 243
+ +F+ + +D+V+WN++I G G + +F M G+ PD TL S+ A
Sbjct: 223 EVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIA 282
Query: 244 GGIELMKISQIHDLIIKLGLESSNKLTG-SLIDVYAKYGSIRSAYQLYRSMLKTDIISCT 302
++ +H +++ G + + + G +++D+YAK I +A +++ SM D +S
Sbjct: 283 QCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWN 342
Query: 303 ALISGFARDDNHSKEAFDLFKDMILKKMGIDDV--ILCLMLNICANVASLNLGRQIHAFA 360
LI+G+ ++ + EA ++ D + K G+ + +L +++ +L G ++HA +
Sbjct: 343 TLITGYMQN-GLASEAIHVY-DHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALS 400
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
K + D VG +ID+YAK G++ +A F++ ++ W ++I+G HG+G +A+
Sbjct: 401 IKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKAL 460
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDL 480
L+ +M+ EG+ P+ VTF+SLL ACSH GL +G F M Y I P A+H++C+VD+
Sbjct: 461 SLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDM 520
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNY 540
F R GQL+ A++ IR M IKP +++W A+LGAC I+GN +G++A++NLF+++P+ Y
Sbjct: 521 FGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYY 580
Query: 541 VVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSK 581
V++SN+Y G WD + R L+ ++L+K PG+S ++ +
Sbjct: 581 VLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKR 621
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/446 (28%), Positives = 214/446 (47%), Gaps = 24/446 (5%)
Query: 130 NQFTYSSALRACARMRWLQG----GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
+ FT+ LRA QG ++ +++ G + F AL+ Y + G + DA
Sbjct: 70 DAFTFPPLLRAA------QGPGTAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDA 123
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGG 245
+ F+ + +DV +WNAM+ GL ++ LF M+ +G+ D T+ S+L V
Sbjct: 124 YRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLL 183
Query: 246 IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALI 305
+ +H +K GL+ + ++IDVY K G + +++ M D+++ ++I
Sbjct: 184 GDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSII 243
Query: 306 SGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ- 364
SG + A ++F M + D + L + + A + GR +H + +
Sbjct: 244 SGHEQ-GGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGW 302
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
D GNA++DMYAK +I A R FD M ++ +SW +LI GY ++G EAI +Y
Sbjct: 303 DVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYD 362
Query: 425 KM-KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFAR 483
M KHEG+ P TF+S+L A SH G +G + I K + +CV+DL+A+
Sbjct: 363 HMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSI-KTGLNLDVYVGTCVIDLYAK 421
Query: 484 RGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF-DMEPE----KSV 538
G+L+ A + Q + T W+A++ ++G+ + A +LF M+ E V
Sbjct: 422 CGKLDEAMLLFEQTPRRSTGP-WNAVISGVGVHGHGA----KALSLFSQMQQEGISPDHV 476
Query: 539 NYVVLSNIYTAAGAWDNARKTRKLME 564
+V L + AG D R +M+
Sbjct: 477 TFVSLLAACSHAGLVDQGRNFFNMMQ 502
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 188/394 (47%), Gaps = 13/394 (3%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T S+L C+ A +H + + +G + L + +I Y K+G + RK F
Sbjct: 169 DAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVF 228
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D M R++V+W ++ISG+ Q G +A+ +F M SGV + T S A A+ +
Sbjct: 229 DGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDIC 288
Query: 149 GGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
GGR + +++G V ++ +A++D+YAK IE A +F+ + +D VSWN +I G
Sbjct: 289 GGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGY 348
Query: 208 AMQGFNDDSFWLFRSMMR-QGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
G ++ ++ M + +G+KP T S+L A L + +++H L IK GL
Sbjct: 349 MQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLD 408
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ +ID+YAK G + A L+ + A+ISG H +A LF M
Sbjct: 409 VYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGV-HGHGAKALSLFSQMQ 467
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIH-----AFAFKYQSSYDAAVGNALIDMYAK 381
+ + D V +L C++ ++ GR A+ K + + A ++DM+ +
Sbjct: 468 QEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYA----CMVDMFGR 523
Query: 382 SGEIADANRAFDEMGDK-NVISWTSLIAGYAKHG 414
+G++ DA M K + W +L+ HG
Sbjct: 524 AGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHG 557
>gi|334186228|ref|NP_191896.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646951|gb|AEE80472.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 884
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 178/556 (32%), Positives = 313/556 (56%), Gaps = 5/556 (0%)
Query: 30 PSTY--MSLLQFCIDKKAERQAHLIHAHII-TNGYESNLHLSTKVIIFYAKVGDVLSARK 86
P++Y +S L C + IHA ++ ++ + S L++ +I Y + G + A +
Sbjct: 282 PNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAER 341
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
+M +VV+W ++I GY QN + AL FS M+ +G ++++ + +S + A R+
Sbjct: 342 ILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSN 401
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
L G + + K + NL V + L+D+Y+KC F R+ KD++SW +I G
Sbjct: 402 LLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAG 461
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
A + ++ LFR + ++ M+ D LGSILRAS ++ + +IH I++ GL +
Sbjct: 462 YAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDT 521
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ L+DVY K ++ A +++ S+ D++S T++IS A + N S EA +LF+ M+
Sbjct: 522 -VIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNES-EAVELFRRMV 579
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ D V L +L+ A++++LN GR+IH + + + ++ A++DMYA G++
Sbjct: 580 ETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQ 639
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A FD + K ++ +TS+I Y HG G A+EL+ KM+HE + P+ ++FL+LL+ACS
Sbjct: 640 SAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACS 699
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
H GL EG M ++Y + P EH+ C+VD+ R + A+ ++ M +PTA +W
Sbjct: 700 HAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVW 759
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
A+L AC + +GE+AA+ L ++EP+ N V++SN++ G W++ K R M+
Sbjct: 760 CALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKAS 819
Query: 567 SLRKNPGYSFLQSSKK 582
+ K+PG S+++ K
Sbjct: 820 GMEKHPGCSWIEMDGK 835
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 161/557 (28%), Positives = 286/557 (51%), Gaps = 17/557 (3%)
Query: 16 ALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFY 75
AL +++ L S++ +LL+ C + R +H+ ++ GY S + ++ Y
Sbjct: 168 ALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMY 227
Query: 76 AKVGDVLSARKAFDRMPER-NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
AK D+ +AR+ FD E+ + V W +++S Y+ +G L +F M +G N +T
Sbjct: 228 AKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTI 287
Query: 135 SSALRACARMRWLQGGRMIQGSIQKGR-FVENLFVKSALLDLYAKCGWIEDAWILFERIE 193
SAL AC + + G+ I S+ K L+V +AL+ +Y +CG + A + ++
Sbjct: 288 VSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN 347
Query: 194 RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ 253
DVV+WN++I G ++ F M+ G K D ++ SI+ AS L+ +
Sbjct: 348 NADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGME 407
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN 313
+H +IK G +S+ ++ +LID+Y+K + + M D+IS T +I+G+A++D
Sbjct: 408 LHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDC 467
Query: 314 HSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN 373
H EA +LF+D+ K+M ID++IL +L + + S+ + ++IH + + D + N
Sbjct: 468 HV-EALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILR-KGLLDTVIQN 525
Query: 374 ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP 433
L+D+Y K + A R F+ + K+V+SWTS+I+ A +G EA+EL+++M G+
Sbjct: 526 ELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSA 585
Query: 434 NDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNM 493
+ V L +L A + +G E+ ++ K L + + VVD++A G L+SA +
Sbjct: 586 DSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVA-VVDMYACCGDLQSAKAV 644
Query: 494 IRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD------MEPEKSVNYVVLSNIY 547
++ K S I + YG G+ AA LFD + P+ ++++ L
Sbjct: 645 FDRIERKGLLQYTSMI----NAYGMHGCGK-AAVELFDKMRHENVSPDH-ISFLALLYAC 698
Query: 548 TAAGAWDNARKTRKLME 564
+ AG D R K+ME
Sbjct: 699 SHAGLLDEGRGFLKIME 715
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 126/415 (30%), Positives = 218/415 (52%), Gaps = 6/415 (1%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITN--GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPE 93
+L+ C ++A Q +H+ I +E + L+ K++ Y K G + A K FD MP+
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDF-LAGKLVFMYGKCGSLDDAEKVFDEMPD 144
Query: 94 RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMI 153
R +W MI Y NG +AL ++ M GV ++ + L+ACA++R ++ G +
Sbjct: 145 RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSEL 204
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERK-DVVSWNAMIGGLAMQGF 212
+ K + F+ +AL+ +YAK + A LF+ + K D V WN+++ + G
Sbjct: 205 HSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGK 264
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN-KLTG 271
+ ++ LFR M G P+ +T+ S L A G +IH ++K SS +
Sbjct: 265 SLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCN 324
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
+LI +Y + G + A ++ R M D+++ +LI G+ ++ + KEA + F DMI
Sbjct: 325 ALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMY-KEALEFFSDMIAAGHK 383
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
D+V + ++ +++L G ++HA+ K+ + VGN LIDMY+K RA
Sbjct: 384 SDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRA 443
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
F M DK++ISWT++IAGYA++ EA+EL++ + + M +++ S+L A S
Sbjct: 444 FLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 191/551 (34%), Positives = 308/551 (55%), Gaps = 56/551 (10%)
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
Y K G++ +AR F++MPE++VVSW AM+SG+AQNG+ E A +F ML N+ ++
Sbjct: 132 YVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVK----NEISW 187
Query: 135 SSALRACARMRWLQGGR---------------------MIQGSIQKGRF--VENLFVKSA 171
+ L A ++Q GR ++ G ++K R +LF +
Sbjct: 188 NGLLSA-----YVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMP 242
Query: 172 LLDL---------YAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRS 222
+ D YA+ G + +A LFE + +DV +W AM+ G G D++ +F
Sbjct: 243 VRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEE 302
Query: 223 MMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGS 282
M + + + +++ V ++ K ++ D + S N +++ YA+ G+
Sbjct: 303 MPEK----NEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWN----TMVTGYAQCGN 354
Query: 283 IRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLN 342
I A L+ M + D IS A+ISG+A+ S+EA LF M ++ L L+
Sbjct: 355 IDQAKILFDEMPQRDCISWAAMISGYAQS-GQSEEALHLFIKMKRDGGILNRSALACALS 413
Query: 343 ICANVASLNLGRQIHAFAFK--YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNV 400
CA +A+L LG+Q+H K +Q+ Y A GNAL+ MY K G I +A F+++ +K++
Sbjct: 414 SCAEIAALELGKQLHGRLVKAGFQTGYIA--GNALLAMYGKCGSIEEAFDVFEDITEKDI 471
Query: 401 ISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTD 460
+SW ++IAGYA+HG+G EA+ L++ MK + P+DVT + +L ACSHTGL +G E F
Sbjct: 472 VSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGLVDKGMEYFNS 530
Query: 461 MINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTS 520
M Y I A+H++C++DL R G+L+ A N+++ M P A+ W A+LGA I+G+T
Sbjct: 531 MYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTE 590
Query: 521 LGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ-S 579
LGE AA +F+MEP+ S YV+LSN+Y A+G W R+ R M ++ ++K PGYS+++
Sbjct: 591 LGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQ 650
Query: 580 SKKNILLLEPC 590
+K +I + C
Sbjct: 651 NKTHIFTVGDC 661
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 195/387 (50%), Gaps = 29/387 (7%)
Query: 71 VIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
+I YA+ G + AR+ F+ +P R+V +WTAM+SG+ QNG + A +F M N
Sbjct: 252 MITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEM----PEKN 307
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE 190
+ ++++ + + + ++ R + + N + ++ YA+CG I+ A ILF+
Sbjct: 308 EVSWNAMIAGYVQSQQIEKARELFDQMPS----RNTSSWNTMVTGYAQCGNIDQAKILFD 363
Query: 191 RIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIEL 248
+ ++D +SW AMI G A G ++++ LF M R G + L L A + +EL
Sbjct: 364 EMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALEL 423
Query: 249 MKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGF 308
K Q+H ++K G ++ +L+ +Y K GSI A+ ++ + + DI+S +I+G+
Sbjct: 424 GK--QLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGY 481
Query: 309 ARDDNHSKEAFDLFKDMILKKMGI--DDVILCLMLNICANVASLNLGRQIHAFAFK-YQS 365
AR KEA LF+ M KM I DDV L +L+ C++ ++ G + ++ Y
Sbjct: 482 AR-HGFGKEALALFESM---KMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGI 537
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHG---YGHEAIE 421
+ +A +ID+ ++G + +A M + +W +L+ HG G +A E
Sbjct: 538 TANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAE 597
Query: 422 LYKKMK--HEGMVPNDVTFLSLLFACS 446
+M+ + GM LS L+A S
Sbjct: 598 KVFEMEPDNSGM----YVLLSNLYAAS 620
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 113/474 (23%), Positives = 203/474 (42%), Gaps = 72/474 (15%)
Query: 82 LSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC 141
L ++ + + + ++V W IS Y + G E+AL VF+ M R TY++
Sbjct: 46 LESKNSDSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRST----VTYNA----- 96
Query: 142 ARMRWLQGGRMIQGSIQKGRF--VENLFVKSALLDL---------YAKCGWIEDAWILFE 190
MI G + +F +F K DL Y K G + A LF
Sbjct: 97 ----------MISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFN 146
Query: 191 RIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMK 250
++ KDVVSWNAM+ G A GF +++ +F M+ + + + +L A V +
Sbjct: 147 QMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVK----NEISWNGLLSAYVQNGRIED 202
Query: 251 ISQIHDLIIKLGLESSNKLTGS---------------------------LIDVYAKYGSI 283
++ D + + S N L G +I YA+ G +
Sbjct: 203 ARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLL 262
Query: 284 RSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNI 343
A +L+ + D+ + TA++SGF + + EA +F++M K ++V M+
Sbjct: 263 SEARRLFEELPIRDVFAWTAMVSGFVQ-NGMLDEATRIFEEMPEK----NEVSWNAMIAG 317
Query: 344 CANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISW 403
+ R++ F S + + N ++ YA+ G I A FDEM ++ ISW
Sbjct: 318 YVQSQQIEKAREL----FDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISW 373
Query: 404 TSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMIN 463
++I+GYA+ G EA+ L+ KMK +G + N L +C+ G +L ++
Sbjct: 374 AAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLV- 432
Query: 464 KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
K + ++ ++ + G +E A+++ + K S W+ ++ + +G
Sbjct: 433 KAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVS-WNTMIAGYARHG 485
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 97/207 (46%), Gaps = 5/207 (2%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
++GQ ++AL + +L+ S L C + A +H ++ G+++
Sbjct: 382 QSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYI 441
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
++ Y K G + A F+ + E+++VSW MI+GYA++G+ + AL +F +M +
Sbjct: 442 AGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMT 500
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSI-QKGRFVENLFVKSALLDLYAKCGWIEDA 185
++ + T L AC+ + G S+ Q N + ++DL + G +++A
Sbjct: 501 IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEA 560
Query: 186 WILFERIE-RKDVVSWNAMIGGLAMQG 211
L + + D +W A++G + G
Sbjct: 561 LNLMKSMPFYPDAATWGALLGASRIHG 587
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 134/295 (45%), Gaps = 55/295 (18%)
Query: 274 IDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGID 333
I Y + G SA ++ M + ++ A+ISG+ S FD + + +KM
Sbjct: 67 ISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYL-----SNNKFDCARK-VFEKMPDR 120
Query: 334 DVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFD 393
D+I N ++ Y K+G ++ A F+
Sbjct: 121 DLI----------------------------------SWNVMLSGYVKNGNLSAARALFN 146
Query: 394 EMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCE 453
+M +K+V+SW ++++G+A++G+ EA +++ +M +V N++++ LL A G +
Sbjct: 147 QMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIED 202
Query: 454 GWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGAC 513
LF ++ + I+ ++C++ + R+ +L+ A ++ +M ++ S W+ ++
Sbjct: 203 ARRLFDSKMD-WEIVS----WNCLMGGYVRKKRLDDARSLFDRMPVRDKIS-WNIMITGY 256
Query: 514 SIYGNTSLGELAARNLFDMEPEKSV-NYVVLSNIYTAAGAWDNARKTRKLMEERS 567
+ G S AR LF+ P + V + + + + G D A + + M E++
Sbjct: 257 AQNGLLS----EARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKN 307
>gi|357440905|ref|XP_003590730.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479778|gb|AES60981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 627
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 189/570 (33%), Positives = 317/570 (55%), Gaps = 18/570 (3%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L P + LLQ ID + + H+ I+TN + N L+T++I YA GD + ++
Sbjct: 24 LSPHNLLHLLQLSIDLHSLKLTQQCHSQILTNCFSQNAFLTTRLISAYATFGDSIMSKLV 83
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD + +NV W ++I+GY +N +NA+++F M R + + +T ++ + ++ L
Sbjct: 84 FDSVHTKNVYLWNSLINGYVKNHQFDNAIVLFRQMGRC-LLPDDYTLATISKVSGEIQDL 142
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G++I G + FV ++ V ++++ +Y +C DA +F+ + +++V S+N +I G
Sbjct: 143 VLGKLIHGKSLRIGFVSDIVVGNSVMSMYIRCREFGDAMKVFDEMPQRNVGSFNVIISGC 202
Query: 208 AMQGFNDDSFW-----LFRSMMRQGMKPDCFTLGSILRA---SVGGIELMKISQIHDLII 259
A G D S + FR M QG D FT+ S+L S G + + ++H ++
Sbjct: 203 AALGNLDYSLYADLWNFFRRMQCQGYNADAFTVASLLPMCCDSDGKFDHGR--ELHCYLV 260
Query: 260 KLGLE----SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHS 315
K GL+ S + SLID+Y++ + + +++ M +I TA+I+G+ ++
Sbjct: 261 KNGLDLKMCSDVHMGSSLIDMYSRSNKLVLSRRVFDQMKSRNIYVWTAMINGYVQN-GAP 319
Query: 316 KEAFDLFKDMILK-KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNA 374
+ A LF++M K ++ + V L +L C + L G+Q+HAF+ K + + ++ NA
Sbjct: 320 EGALILFREMQRKDRIRPNRVSLVSVLPACGLLVGLMGGKQVHAFSIKMEFNDYISLRNA 379
Query: 375 LIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP 433
LIDMYAK G + A R FD K+ I+W+S+I+ Y HG G EA+ Y +M +G+ P
Sbjct: 380 LIDMYAKCGSLDYARRVFDNGSYSKDAITWSSIISAYGLHGKGQEALTTYYEMLQQGIKP 439
Query: 434 NDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNM 493
+ +T + +L AC +GL EG ++ + +Y + P E CVVDL R GQL+ A +
Sbjct: 440 DMITVVGVLSACCRSGLVDEGISIYNSLTTEYEMKPSVEICGCVVDLLGRSGQLDQALDF 499
Query: 494 IRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAW 553
IR+M I P S+W ++L A I+GN+ +LA R L ++EPE NY+ LSN Y ++ W
Sbjct: 500 IREMPIIPGPSVWGSLLTASVIHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASSRRW 559
Query: 554 DNARKTRKLMEERSLRKNPGYSFLQSSKKN 583
D + R +M+ER LRK PG S++ S KN
Sbjct: 560 DEITEVRSMMKERGLRKVPGISWITISDKN 589
>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
Length = 1017
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 178/556 (32%), Positives = 313/556 (56%), Gaps = 5/556 (0%)
Query: 30 PSTY--MSLLQFCIDKKAERQAHLIHAHII-TNGYESNLHLSTKVIIFYAKVGDVLSARK 86
P++Y +S L C + IHA ++ ++ + S L++ +I Y + G + A +
Sbjct: 245 PNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAER 304
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
+M +VV+W ++I GY QN + AL FS M+ +G ++++ + +S + A R+
Sbjct: 305 ILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSN 364
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
L G + + K + NL V + L+D+Y+KC F R+ KD++SW +I G
Sbjct: 365 LLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAG 424
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
A + ++ LFR + ++ M+ D LGSILRAS ++ + +IH I++ GL +
Sbjct: 425 YAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDT 484
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ L+DVY K ++ A +++ S+ D++S T++IS A + N S EA +LF+ M+
Sbjct: 485 -VIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNES-EAVELFRRMV 542
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ D V L +L+ A++++LN GR+IH + + + ++ A++DMYA G++
Sbjct: 543 ETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQ 602
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A FD + K ++ +TS+I Y HG G A+EL+ KM+HE + P+ ++FL+LL+ACS
Sbjct: 603 SAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACS 662
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
H GL EG M ++Y + P EH+ C+VD+ R + A+ ++ M +PTA +W
Sbjct: 663 HAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVW 722
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
A+L AC + +GE+AA+ L ++EP+ N V++SN++ G W++ K R M+
Sbjct: 723 CALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKAS 782
Query: 567 SLRKNPGYSFLQSSKK 582
+ K+PG S+++ K
Sbjct: 783 GMEKHPGCSWIEMDGK 798
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 161/557 (28%), Positives = 286/557 (51%), Gaps = 17/557 (3%)
Query: 16 ALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFY 75
AL +++ L S++ +LL+ C + R +H+ ++ GY S + ++ Y
Sbjct: 131 ALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMY 190
Query: 76 AKVGDVLSARKAFDRMPER-NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
AK D+ +AR+ FD E+ + V W +++S Y+ +G L +F M +G N +T
Sbjct: 191 AKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTI 250
Query: 135 SSALRACARMRWLQGGRMIQGSIQKGR-FVENLFVKSALLDLYAKCGWIEDAWILFERIE 193
SAL AC + + G+ I S+ K L+V +AL+ +Y +CG + A + ++
Sbjct: 251 VSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN 310
Query: 194 RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ 253
DVV+WN++I G ++ F M+ G K D ++ SI+ AS L+ +
Sbjct: 311 NADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGME 370
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN 313
+H +IK G +S+ ++ +LID+Y+K + + M D+IS T +I+G+A++D
Sbjct: 371 LHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDC 430
Query: 314 HSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN 373
H EA +LF+D+ K+M ID++IL +L + + S+ + ++IH + + D + N
Sbjct: 431 HV-EALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILR-KGLLDTVIQN 488
Query: 374 ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP 433
L+D+Y K + A R F+ + K+V+SWTS+I+ A +G EA+EL+++M G+
Sbjct: 489 ELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSA 548
Query: 434 NDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNM 493
+ V L +L A + +G E+ ++ K L + + VVD++A G L+SA +
Sbjct: 549 DSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVA-VVDMYACCGDLQSAKAV 607
Query: 494 IRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD------MEPEKSVNYVVLSNIY 547
++ K S I + YG G+ AA LFD + P+ ++++ L
Sbjct: 608 FDRIERKGLLQYTSMI----NAYGMHGCGK-AAVELFDKMRHENVSPDH-ISFLALLYAC 661
Query: 548 TAAGAWDNARKTRKLME 564
+ AG D R K+ME
Sbjct: 662 SHAGLLDEGRGFLKIME 678
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 195/367 (53%), Gaps = 3/367 (0%)
Query: 82 LSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC 141
+S K FD MP+R +W MI Y NG +AL ++ M GV ++ + L+AC
Sbjct: 96 VSQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKAC 155
Query: 142 ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERK-DVVSW 200
A++R ++ G + + K + F+ +AL+ +YAK + A LF+ + K D V W
Sbjct: 156 AKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLW 215
Query: 201 NAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIK 260
N+++ + G + ++ LFR M G P+ +T+ S L A G +IH ++K
Sbjct: 216 NSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLK 275
Query: 261 LGLESSN-KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
SS + +LI +Y + G + A ++ R M D+++ +LI G+ ++ + KEA
Sbjct: 276 SSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMY-KEAL 334
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMY 379
+ F DMI D+V + ++ +++L G ++HA+ K+ + VGN LIDMY
Sbjct: 335 EFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMY 394
Query: 380 AKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFL 439
+K RAF M DK++ISWT++IAGYA++ EA+EL++ + + M +++
Sbjct: 395 SKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILG 454
Query: 440 SLLFACS 446
S+L A S
Sbjct: 455 SILRASS 461
>gi|293333548|ref|NP_001170485.1| uncharacterized protein LOC100384484 [Zea mays]
gi|238005588|gb|ACR33829.1| unknown [Zea mays]
gi|413920755|gb|AFW60687.1| hypothetical protein ZEAMMB73_143396 [Zea mays]
Length = 569
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 179/530 (33%), Positives = 286/530 (53%), Gaps = 10/530 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYA--QN 109
IHA I G +N +T ++ A + AR+ FD P R+ W ++ ++ Q
Sbjct: 40 IHARAIVLGVSANPAFATSLLAGVAP-ASLAYARRVFDATPVRDAYMWNTLLRAHSHSQL 98
Query: 110 GYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK 169
+ + L ++ M +GV + +TY L ACA R L GR + G + + + FV
Sbjct: 99 SHAADTLALYKRMRAAGVAPDHYTYPIVLPACAAARELWLGRAVHGDVVRFALAGDGFVH 158
Query: 170 SALLDLYAKCGWIEDAWILFERIE--RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
SAL+ +Y + G + DA ++F + VVSW +M+ G + ++ LF +M+ +G
Sbjct: 159 SALITMYFQEGEVADAELVFAESHGSSRTVVSWTSMVAGYVQNYYFGEAVALFGTMIAEG 218
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
+ P+ TL S L G L +H +I+LG +++ L +LI +Y K GSI A
Sbjct: 219 VLPNEITLISFLPCLQGQEWLDAGEMVHGFVIRLGFDANIPLANALIAMYGKCGSIPMAQ 278
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSK--EAFDLFKDMILKKMGIDDVILCLMLNICA 345
L+ M + S +++ + + H+ EA F+ M+ +K+G D V L +L+ CA
Sbjct: 279 TLFEGMPARSLASWNTMVAMY---EQHADVVEAIKFFRRMLTEKVGFDCVTLVSVLSACA 335
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
+L G+ +H A + DA +GN L+DMYAK GEIA A FD + ++V+SW++
Sbjct: 336 RSGALQTGKWVHELARNHGLDTDARIGNVLVDMYAKCGEIASARNVFDCLRMRSVVSWSA 395
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
+I+ YA HG EA++L+ MK+EG+ PN TF ++L AC H+GL EG + F +++ Y
Sbjct: 396 MISAYANHGASEEALKLFSLMKNEGVRPNSFTFTAVLVACGHSGLVEEGLKHFNSILSDY 455
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
++ P EH++C+VD+ R G+L AY +IR M++ P +W A L C ++GN L E
Sbjct: 456 QMSPTLEHYACMVDMLGRAGRLIEAYEIIRGMSLCPDKCVWGAFLAGCKLHGNLELAEFV 515
Query: 526 ARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYS 575
AR+LF YV++SN+Y AG +A + R M+E L K G S
Sbjct: 516 ARDLFQSGSNDVTFYVLMSNMYFEAGMLKDAERMRWAMKEMELNKTAGRS 565
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 193/422 (45%), Gaps = 15/422 (3%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY +L C + +H ++ + + + +I Y + G+V A F
Sbjct: 119 DHYTYPIVLPACAAARELWLGRAVHGDVVRFALAGDGFVHSALITMYFQEGEVADAELVF 178
Query: 89 --DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
R VVSWT+M++GY QN Y A+ +F M+ GV N+ T S L W
Sbjct: 179 AESHGSSRTVVSWTSMVAGYVQNYYFGEAVALFGTMIAEGVLPNEITLISFLPCLQGQEW 238
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
L G M+ G + + F N+ + +AL+ +Y KCG I A LFE + + + SWN M+
Sbjct: 239 LDAGEMVHGFVIRLGFDANIPLANALIAMYGKCGSIPMAQTLFEGMPARSLASWNTMVAM 298
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
++ FR M+ + + DC TL S+L A L +H+L GL++
Sbjct: 299 YEQHADVVEAIKFFRRMLTEKVGFDCVTLVSVLSACARSGALQTGKWVHELARNHGLDTD 358
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH--SKEAFDLFKD 324
++ L+D+YAK G I SA ++ + ++S +A+IS +A NH S+EA LF
Sbjct: 359 ARIGNVLVDMYAKCGEIASARNVFDCLRMRSVVSWSAMISAYA---NHGASEEALKLFSL 415
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
M + + + +L C + + G + ++ YQ S ++DM ++G
Sbjct: 416 MKNEGVRPNSFTFTAVLVACGHSGLVEEGLKHFNSILSDYQMSPTLEHYACMVDMLGRAG 475
Query: 384 EIADAN---RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
+ +A R DK V W + +AG HG A + + + G NDVTF
Sbjct: 476 RLIEAYEIIRGMSLCPDKCV--WGAFLAGCKLHGNLELAEFVARDLFQSG--SNDVTFYV 531
Query: 441 LL 442
L+
Sbjct: 532 LM 533
>gi|225428280|ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Vitis vinifera]
Length = 742
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 188/558 (33%), Positives = 308/558 (55%), Gaps = 11/558 (1%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
ST + + C A + +H +II +G+ + ++ YA D+ A + FD
Sbjct: 151 STLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDE 209
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAML-RSGVRANQFTYSSALRACARMRWLQG 149
M ER+V+SW+ MI GY Q G + AL +F M + + + T S L+ACA +
Sbjct: 210 MCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISM 269
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
GR + G + +LFV ++++D+Y+KC E A+ F + ++ VSWN++I GL
Sbjct: 270 GRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVR 329
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
+ ++ LF SM + G + D TL ++L++ ++ + IH ++I+ G E + +
Sbjct: 330 TEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFV 389
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH---SKEAFDLFKDMI 326
SLID Y+K I A++L+ + D +S +A+I+GF NH EA LF++M
Sbjct: 390 INSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGF----NHCGKPDEAIALFQEMN 445
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ + V + +L + A L + H A + + + AVG A++DMYAK GEI
Sbjct: 446 QAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIG 505
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
+ +AFD++ +KN++SW ++IA +G +A+ L +MK G+ PN VT LS+L ACS
Sbjct: 506 LSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACS 565
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM--NIKPTAS 504
H GL EG F +M+ + + P EH+SC+VD+ +R G+L SA N+I +M ++ A
Sbjct: 566 HGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMRDGAG 625
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
LW A+L AC GN+ LG AA + ++EP+ S Y + S++Y A+G W +A + R L++
Sbjct: 626 LWGALLSACRSSGNSRLGAGAAFRVLELEPQSSAGYFLASSMYAASGLWADAARMRWLVK 685
Query: 565 ERSLRKNPGYSFLQSSKK 582
R +R GYS + K
Sbjct: 686 ARGVRVVAGYSLVHVEDK 703
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 152/525 (28%), Positives = 248/525 (47%), Gaps = 16/525 (3%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L DP+ S+L+ C R IHA ++ G++S V+ FY K G + SA
Sbjct: 47 LTDPTLVHSILKACSSLPV-RHGKSIHASLLKQGFDSLTSTGNSVLDFYMKTGALDSALF 105
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FD M R+ VSW MI G+ G + L F N T A+ AC +
Sbjct: 106 VFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGA 165
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
++ G + G I + F++ V+++LL +YA +E A LF+ + +DV+SW+ MIGG
Sbjct: 166 MEEGLKMHGYIIRSGFLDIPSVQNSLLSMYADND-MERAEELFDEMCERDVISWSVMIGG 224
Query: 207 LAMQGFNDDSFWLFRSMMRQG-MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
G + LF M ++ D T+ S+L+A ++ +H ++I GL+
Sbjct: 225 YVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDY 284
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ S+ID+Y+K SA++ + M + +S ++ISG R + HS EA LF M
Sbjct: 285 DLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHS-EALSLFYSM 343
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
D+V L +L C + IH+ ++ + V N+LID Y+K I
Sbjct: 344 GKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLI 403
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A + FD + K+ +SW+++IAG+ G EAI L+++M PN VT LSLL A
Sbjct: 404 ELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAF 463
Query: 446 SHTG-LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQL---ESAYNMIRQMNIKP 501
S + L W + + + + ++D++A+ G++ A++ I + NI
Sbjct: 464 SVSADLKRSKWA--HGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVS 521
Query: 502 TASLWSAILGACSIYG--NTSLGELAARNLFDMEPEKSVNYVVLS 544
W A++ AC + G +L L+ L ++P VLS
Sbjct: 522 ----WGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLS 562
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 202/404 (50%), Gaps = 25/404 (6%)
Query: 9 KTGQLKQALKFSL---SCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNL 65
+TG+ K AL+ L S LD T +S+L+ C + +H +I G + +L
Sbjct: 227 QTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDL 286
Query: 66 HLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
+ +I Y+K D SA KAF+ MP RN VSW ++ISG + AL +F +M ++
Sbjct: 287 FVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKA 346
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
G RA++ T + L++C + I + + + N FV ++L+D Y+KC IE A
Sbjct: 347 GFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELA 406
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGG 245
W LF+R++ KD VSW+AMI G G D++ LF+ M + KP+ T+ S+L A
Sbjct: 407 WKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVS 466
Query: 246 IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALI 305
+L + H + I+ GL + + +++D+YAK G I + + + + + +I+S A+I
Sbjct: 467 ADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMI 526
Query: 306 S-----GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
+ G ARD A L +M L + + V +L+ C++ + G +
Sbjct: 527 AACGMNGLARD------ALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEG-----LS 575
Query: 361 FKYQSSYDAAVGNAL------IDMYAKSGEIADANRAFDEMGDK 398
F D V L +DM +++G++ A ++M ++
Sbjct: 576 FFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPER 619
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 180/552 (32%), Positives = 309/552 (55%), Gaps = 19/552 (3%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
+++LL+ C K ER H I A I+T+G E N ++ I ++ + ARK FD++P
Sbjct: 15 FITLLRSC--KNYER-LHQIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLFDKIP 71
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
+ N +W AM GY QNG+ + +++F + R N FT+ +++C ++ ++ G
Sbjct: 72 QPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGEE 131
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF 212
+ K F N FV ++L+D+Y+K G +EDA+ +F + ++VV W A+I G + G
Sbjct: 132 VHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCGD 191
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS 272
LF + + + S+L + G IE ++ +L K+ N+ T S
Sbjct: 192 VVSGRRLFDLAPERDV-----VMWSVLIS--GYIESKNMAAARELFDKM----PNRDTMS 240
Query: 273 ---LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+++ YA G + +++ M + ++ S LI G+ ++ S E + FK M+++
Sbjct: 241 WNAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFS-ETLESFKRMLVEG 299
Query: 330 MGI-DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
I +D L +L+ C+ + +L++G+ +H +A + VGN LIDMYAK G I +A
Sbjct: 300 HVIPNDFTLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENA 359
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
F+ + K++ISW ++I G A HG+ +A+ ++ +MK EG P+ VTF+ +L AC+H
Sbjct: 360 VVVFNCLDRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHM 419
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
GL +G+ F M++ Y I+P+ EH+ C+VDL R G L+ A N IR+M I+P A +W+A
Sbjct: 420 GLVKDGFLYFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAA 479
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+LGAC +Y N + ELA + L ++EP N+V++SNIY G ++ + + M +
Sbjct: 480 LLGACRLYKNVEIAELALQRLIELEPNNPANFVMVSNIYKDLGRSEDVARLKIAMRDTGF 539
Query: 569 RKNPGYSFLQSS 580
RK PG S ++ +
Sbjct: 540 RKLPGCSVIECN 551
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 187/417 (44%), Gaps = 47/417 (11%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ +++ C + R+ +H +G++SN ++T +I Y+K G V A K F M
Sbjct: 112 TFPMIIKSCGKLEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEM 171
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
ERNVV WTA+I+GY G + +F V +S + + + R
Sbjct: 172 HERNVVVWTAIINGYILCGDVVSGRRLFDLAPERDV----VMWSVLISGYIESKNMAAAR 227
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ + + +A+L+ YA G +E +F+ + ++V SWN +IGG G
Sbjct: 228 ELFDKMPN----RDTMSWNAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNG 283
Query: 212 FNDDSFWLFRSMMRQG-MKPDCFTLGSILRAS--VGGIELMKISQIHDLIIKLGLESSNK 268
++ F+ M+ +G + P+ FTL ++L A +G +++ K +H +G + +
Sbjct: 284 LFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGK--WVHVYAESIGYKGNLF 341
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ LID+YAK G I +A ++ + + DIIS +I+G A H+ +A +F M +
Sbjct: 342 VGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTIINGLAI-HGHAPDALGMFDRMKSE 400
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
D V +L+ C ++ + G F Y S ++D Y+ +I
Sbjct: 401 GEEPDGVTFVGILSACTHMGLVKDG-------FLYFKS--------MVDHYSIVPQIEHY 445
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
D +G + G +A+ +KM E P+ V + +LL AC
Sbjct: 446 GCMVDLLG---------------RAGLLDQALNFIRKMPIE---PDAVIWAALLGAC 484
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 169/498 (33%), Positives = 283/498 (56%), Gaps = 6/498 (1%)
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
++F P V+ IS NG + ALL AML G Y + L AC R
Sbjct: 10 RSFSSSPTNYVLQTILPISQLCSNGRLQEALLEM-AML--GPEMGFHGYDALLNACLDKR 66
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
L+ G+ + + K R++ ++++ LL Y KC +EDA + + + K+VVSW AMI
Sbjct: 67 ALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMIS 126
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
+ G + ++ +F MMR KP+ FT ++L + + L QIH LI+K +S
Sbjct: 127 RYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDS 186
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ SL+D+YAK G I+ A +++ + + D++SCTA+I+G+A+ +EA ++F +
Sbjct: 187 HIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQL-GLDEEALEMFHRL 245
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ M + V +L + +A L+ G+Q H + + + A + N+LIDMY+K G +
Sbjct: 246 HSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNL 305
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV-PNDVTFLSLLFA 444
+ A R FD M ++ ISW +++ GY+KHG G E +EL++ M+ E V P+ VT L++L
Sbjct: 306 SYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSG 365
Query: 445 CSHTGLTCEGWELFTDMI-NKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
CSH + G +F M+ +Y P EH+ C+VD+ R G+++ A+ I++M KPTA
Sbjct: 366 CSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTA 425
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
+ ++LGAC ++ + +GE R L ++EPE + NYV+LSN+Y +AG W + R +M
Sbjct: 426 GVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMM 485
Query: 564 EERSLRKNPGYSFLQSSK 581
++++ K PG S++Q +
Sbjct: 486 MQKAVTKEPGRSWIQHEQ 503
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 135/392 (34%), Positives = 218/392 (55%), Gaps = 7/392 (1%)
Query: 11 GQLKQAL-KFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLST 69
G+L++AL + ++ P+ + Y +LL C+DK+A R +HAH+I Y +L T
Sbjct: 34 GRLQEALLEMAMLGPE--MGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRT 91
Query: 70 KVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA 129
+++IFY K + ARK D MPE+NVVSWTAMIS Y+Q G+ AL VF+ M+RS +
Sbjct: 92 RLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKP 151
Query: 130 NQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILF 189
N+FT+++ L +C R L G+ I G I K + ++FV S+LLD+YAK G I++A +F
Sbjct: 152 NEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIF 211
Query: 190 ERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELM 249
E + +DVVS A+I G A G ++++ +F + +GM P+ T S+L A G L
Sbjct: 212 ECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLD 271
Query: 250 KISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFA 309
Q H +++ L L SLID+Y+K G++ A +L+ +M + IS A++ G++
Sbjct: 272 HGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYS 331
Query: 310 RDDNHSKEAFDLFKDMI-LKKMGIDDVILCLMLNICANVASLNLGRQIH--AFAFKYQSS 366
+ +E +LF+ M K++ D V L +L+ C++ + G I A +Y +
Sbjct: 332 K-HGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTK 390
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDK 398
++DM ++G I +A M K
Sbjct: 391 PGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 422
>gi|57899090|dbj|BAD86909.1| putative PPR986-12 [Oryza sativa Japonica Group]
Length = 560
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 282/522 (54%), Gaps = 17/522 (3%)
Query: 68 STKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV 127
+T +I G V AR FD MPER+VV+WTAM+SGYA NG AL VF M+ +G
Sbjct: 6 ATTLISSLCSRGAVCHARALFDEMPERDVVAWTAMLSGYASNGLRREALDVFRRMVAAGA 65
Query: 128 RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENL-FVKSALLDLYAKCG-WIEDA 185
N++T SS L AC R M ++ R V+ + +V +AL+D YA + DA
Sbjct: 66 APNEYTLSSVLTAC-RGPCAPAMAMPLHAVAVRRGVDRMPYVVNALIDSYASLAEGVVDA 124
Query: 186 WILFERI-ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG 244
LF+ + + SW +MI G A G LF++M++ G++ F L A
Sbjct: 125 RRLFDALGSGRTAASWTSMIAGYARWGQERTGLRLFKTMLKDGVELSTFACSIALHACTL 184
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
I+L Q+H IK L+ + + SLID+Y I A L+ + ++I+ +
Sbjct: 185 VIDLCLGQQLHLQCIKKALDVNLAVVNSLIDMYCTCARILDARSLFDGTPERNLITWNTM 244
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLML----NICANVASLNLGRQIHAFA 360
I+G+++ D A L +M +D C L + CA++A+L G+Q+H
Sbjct: 245 IAGYSQCD--PLMALQLLLEM-------NDEPNCFTLTSITSACADLAALRCGKQVHGAV 295
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
+ S D +GNAL+DMY+K G I +A FD MG K+ SWTS+IAGY +GYG+EA+
Sbjct: 296 LRRSYSDDLQMGNALVDMYSKCGSITNAKNVFDRMGCKDKFSWTSMIAGYGMNGYGNEAV 355
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDL 480
+L+ M H G+ P+ V FLSL+ +CSH GL EGW F MIN+Y + P E + VV+L
Sbjct: 356 QLFSSMIHAGVHPDHVVFLSLISSCSHAGLVDEGWNFFRSMINEYNLQPNKEVYGSVVNL 415
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNY 540
AR G+L A ++I M P +W A+LGA ++ N +G LAAR + ++ P+ NY
Sbjct: 416 LARAGRLREALDLIDTMPFAPDEYVWGALLGASKMHNNVEMGRLAARKITEINPDDVKNY 475
Query: 541 VVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
++L++IY A W TR+ + RK G S+++ K
Sbjct: 476 IMLASIYAAGSKWGEYAFTRRSLRGIGSRKEAGISWIEVMDK 517
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 132/243 (54%), Gaps = 5/243 (2%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H I + NL + +I Y +L AR FD PERN+++W MI+GY+Q
Sbjct: 194 LHLQCIKKALDVNLAVVNSLIDMYCTCARILDARSLFDGTPERNLITWNTMIAGYSQC-- 251
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ L+ +L N FT +S ACA + L+ G+ + G++ + + ++L + +A
Sbjct: 252 --DPLMALQLLLEMNDEPNCFTLTSITSACADLAALRCGKQVHGAVLRRSYSDDLQMGNA 309
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+D+Y+KCG I +A +F+R+ KD SW +MI G M G+ +++ LF SM+ G+ PD
Sbjct: 310 LVDMYSKCGSITNAKNVFDRMGCKDKFSWTSMIAGYGMNGYGNEAVQLFSSMIHAGVHPD 369
Query: 232 CFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
S++ + S G+ + +I + L+ + ++ GS++++ A+ G +R A L
Sbjct: 370 HVVFLSLISSCSHAGLVDEGWNFFRSMINEYNLQPNKEVYGSVVNLLARAGRLREALDLI 429
Query: 291 RSM 293
+M
Sbjct: 430 DTM 432
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 97/201 (48%), Gaps = 3/201 (1%)
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
S K +LI G++ A L+ M + D+++ TA++SG+A + +EA D+F+ M
Sbjct: 2 SQKHATTLISSLCSRGAVCHARALFDEMPERDVVAWTAMLSGYA-SNGLRREALDVFRRM 60
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE- 384
+ ++ L +L C + + +HA A + V NALID YA E
Sbjct: 61 VAAGAAPNEYTLSSVLTACRGPCAPAMAMPLHAVAVRRGVDRMPYVVNALIDSYASLAEG 120
Query: 385 IADANRAFDEMGD-KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
+ DA R FD +G + SWTS+IAGYA+ G + L+K M +G+ + L
Sbjct: 121 VVDARRLFDALGSGRTAASWTSMIAGYARWGQERTGLRLFKTMLKDGVELSTFACSIALH 180
Query: 444 ACSHTGLTCEGWELFTDMINK 464
AC+ C G +L I K
Sbjct: 181 ACTLVIDLCLGQQLHLQCIKK 201
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 2/181 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T S+ C D A R +H ++ Y +L + ++ Y+K G + +A+ FDRM
Sbjct: 271 TLTSITSACADLAALRCGKQVHGAVLRRSYSDDLQMGNALVDMYSKCGSITNAKNVFDRM 330
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL-QGG 150
++ SWT+MI+GY NGY A+ +FS+M+ +GV + + S + +C+ + +G
Sbjct: 331 GCKDKFSWTSMIAGYGMNGYGNEAVQLFSSMIHAGVHPDHVVFLSLISSCSHAGLVDEGW 390
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGGLAM 209
+ I + N V ++++L A+ G + +A L + + D W A++G M
Sbjct: 391 NFFRSMINEYNLQPNKEVYGSVVNLLARAGRLREALDLIDTMPFAPDEYVWGALLGASKM 450
Query: 210 Q 210
Sbjct: 451 H 451
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 193/587 (32%), Positives = 318/587 (54%), Gaps = 18/587 (3%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYE 62
I + + TG+ AL F +L+ PSTY+S F + H Y
Sbjct: 20 IAQRDLITGKTLHALYFK-----SLIPPSTYLSN-HFTLLYSKCGSLHNAQTSFDLTQYP 73
Query: 63 SNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAM 122
+ +T +I YAK + AR+ FD +P+ ++VS+ +I+ YA G AL +F+ +
Sbjct: 74 NVFSYNT-LINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEV 132
Query: 123 --LRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
LR G+ + FT S + AC L R + + + V +A+L Y++ G
Sbjct: 133 RELRFGL--DGFTLSGVIIACGDDVGLV--RQLHCFVVVCGYDCYASVNNAVLACYSRKG 188
Query: 181 WIEDAWILFERIER---KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGS 237
++ +A +F + +D VSWNAMI ++ LFR M+R+G+K D FT+ S
Sbjct: 189 FLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMAS 248
Query: 238 ILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAK-YGSIRSAYQLYRSMLKT 296
+L A +L+ Q H ++IK G ++ + LID+Y+K G + +++ +
Sbjct: 249 VLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAP 308
Query: 297 DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI 356
D++ +ISGF++ ++ S++ F++M DD + + C+N++S ++G+Q+
Sbjct: 309 DLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQV 368
Query: 357 HAFAFKYQSSYD-AAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGY 415
HA A K Y+ +V NAL+ MY+K G + DA R FD M + N++S S+IAGYA+HG
Sbjct: 369 HALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGV 428
Query: 416 GHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFS 475
E++ L++ M + + PN +TF+++L AC HTG EG + F M ++RI P AEH+S
Sbjct: 429 EVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYS 488
Query: 476 CVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPE 535
C++DL R G+L+ A +I M P + W+ +LGAC +GN L AA +EP
Sbjct: 489 CMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPY 548
Query: 536 KSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+ YV+LSN+Y +A W+ A ++LM ER ++K PG S+++ KK
Sbjct: 549 NAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKK 595
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN 399
+L C L G+ +HA FK + N +Y+K G + +A +FD N
Sbjct: 15 LLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLTQYPN 74
Query: 400 VISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFT 459
V S+ +LI YAKH H A +++ ++ P+ V++ +L+ A + G LF
Sbjct: 75 VFSYNTLINAYAKHSLIHLARQVFDEIPQ----PDIVSYNTLIAAYADRGECRPALRLFA 130
Query: 460 DM 461
++
Sbjct: 131 EV 132
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 179/557 (32%), Positives = 304/557 (54%), Gaps = 9/557 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T S+L C A ++ +H I G ++ + ++ Y K + AR+ F
Sbjct: 221 DCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVF 280
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+M ++ V+W MI GYAQ G E ++ +F M+ G + + +S +RAC + LQ
Sbjct: 281 SKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMI-DGFVPDMLSITSTIRACGQSGDLQ 339
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ + + F + + L+D+YAKCG + A +F+ + KD V+WN++I G
Sbjct: 340 VGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYT 399
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ---IHDLIIKLGLES 265
G+ + F+ MM+ KPD T +L S+ +L I+Q IH +IK G E+
Sbjct: 400 QSGYYKEGLESFK-MMKMERKPDSVTF--VLLLSIFS-QLADINQGRGIHCDVIKFGFEA 455
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ SL+DVYAK G + +++ M DIIS +I+ D+ + F + +M
Sbjct: 456 ELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTV-GFQMINEM 514
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ + D+ + +L +C+ +A G++IH + FK + +GNALI+MY+K G +
Sbjct: 515 RTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSL 574
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
+ + F M +K+V++WT+LI+ + +G G +A++ ++ M+ G++P+ V F++ +FAC
Sbjct: 575 ENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFAC 634
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
SH+G+ EG F M Y + PR EH++CVVDL AR G L A I M +KP ASL
Sbjct: 635 SHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASL 694
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
W A+L AC GNT++ + ++ + ++ + + YV++SNIY G WD + R M+
Sbjct: 695 WGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKT 754
Query: 566 RSLRKNPGYSFLQSSKK 582
+ L+K PG S+++ K+
Sbjct: 755 KGLKKEPGSSWIEIQKR 771
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/489 (28%), Positives = 247/489 (50%), Gaps = 6/489 (1%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM-PE 93
SLL+ K Q +H+ IIT+G ++ S K+I YA+V D +S+ F + P
Sbjct: 24 SLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPT 83
Query: 94 RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMI 153
NV W ++I NG AL ++ M ++ + FT+ S + +CAR+ L+ G ++
Sbjct: 84 NNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIV 143
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN 213
+ F +L++ +AL+D+Y++ +++A +FE + +D VSWN++I G GF
Sbjct: 144 HEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFW 203
Query: 214 DDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSL 273
+D+ ++ GM PDCFT+ S+L A + + + +H +I K+G+ + L
Sbjct: 204 EDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGL 263
Query: 274 IDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGID 333
+ +Y K+ +R A +++ M D ++ +I G+A+ H + + LF DMI D
Sbjct: 264 LSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRH-EASVKLFMDMI-DGFVPD 321
Query: 334 DVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFD 393
+ + + C L +G+ +H + D N LIDMYAK G++ A FD
Sbjct: 322 MLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFD 381
Query: 394 EMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCE 453
K+ ++W SLI GY + GY E +E +K MK E P+ VTF+ LL S +
Sbjct: 382 TTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERK-PDSVTFVLLLSIFSQLADINQ 440
Query: 454 GWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGAC 513
G + D+I K+ + ++D++A+ G+++ + M+ S W+ ++ +
Sbjct: 441 GRGIHCDVI-KFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIIS-WNTVIASS 498
Query: 514 SIYGNTSLG 522
+ + ++G
Sbjct: 499 VHFDDCTVG 507
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 145/303 (47%), Gaps = 11/303 (3%)
Query: 233 FTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRS 292
F S+L+ ++ +H LII GL S +G LI YA+ S+ ++RS
Sbjct: 20 FLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRS 79
Query: 293 MLKTDIISCTALISGFARDDNHS---KEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ T+ + L + R H+ +A + +M KK+ D ++N CA +
Sbjct: 80 ISPTNNV---YLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILD 136
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
L LG +H A + D +GNALIDMY++ ++ +A F+EM +++ +SW SLI+G
Sbjct: 137 LELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISG 196
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
Y +G+ +A+++Y K + GMVP+ T S+L AC EG + +I K I
Sbjct: 197 YCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVH-GVIEKIGIAG 255
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
+ ++ ++ + +L A + +M +K + + + I G Y E + +
Sbjct: 256 DVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICG----YAQLGRHEASVKLF 311
Query: 530 FDM 532
DM
Sbjct: 312 MDM 314
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 182/535 (34%), Positives = 306/535 (57%), Gaps = 13/535 (2%)
Query: 49 AHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQ 108
A +H + GY ++ +++ + Y K+ ARK FD +P + + W +++G
Sbjct: 133 ARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPG 192
Query: 109 NGYDENALLVFSAMLRSG-VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLF 167
+ AL F M+ +G VR + T +S+LRA A + GR + G K E+
Sbjct: 193 S----EALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEH 248
Query: 168 VKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
V + L+ LY+KCG ++ A LF+R++ D+V++NA+I G ++ G + S LF+ + G
Sbjct: 249 VVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASG 308
Query: 228 MKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSA 286
+P+ TL +++ S G EL+ +H ++K L++ ++ +L +Y + + SA
Sbjct: 309 WRPNSSTLVAVIPVYSPFGHELLA-RCLHAFVVKARLDADALVSTALTTLYCRLNDMESA 367
Query: 287 YQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICAN 346
++ +ML+ + S A+ISG+A++ ++ A LF+ M + + + + L+ CA+
Sbjct: 368 RSIFDAMLEKTMESWNAMISGYAQN-GLTEMAVALFQLMQELNVQPNPITISSTLSACAH 426
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
+ +L+LG+ +H K + + V ALIDMYAK G IA+A FD M +KNV+SW ++
Sbjct: 427 LGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAM 486
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYR 466
I+GY HG G EA++LYK M ++P TFLS+++ACSH GL EG ++F M N+YR
Sbjct: 487 ISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYR 546
Query: 467 ILPRAEHFSCVVDLFARRGQLESAYNMIR---QMNIKPTASLWSAILGACSIYGNTSLGE 523
I P EH +C+VDL R G+L A +I Q I P +W A+LGAC ++ N+ L +
Sbjct: 547 ITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGP--GVWGALLGACMVHKNSDLAK 604
Query: 524 LAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
LA++ LF+++ E + YV+LSN+YT+ + A R+ + R L K PG + ++
Sbjct: 605 LASQKLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIE 659
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 143/258 (55%), Gaps = 9/258 (3%)
Query: 46 ERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISG 105
E A +HA ++ +++ +ST + Y ++ D+ SAR FD M E+ + SW AMISG
Sbjct: 329 ELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISG 388
Query: 106 YAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVEN 165
YAQNG E A+ +F M V+ N T SS L ACA + L G+ + I K + N
Sbjct: 389 YAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELN 448
Query: 166 LFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR 225
++V +AL+D+YAKCG I +A +F+R++ K+VVSWNAMI G + G ++ L++ M+
Sbjct: 449 VYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLD 508
Query: 226 QGMKPDCFTLGSILRA-SVGGI--ELMKISQI--HDLIIKLGLESSNKLTGSLIDVYAKY 280
+ P T S++ A S GG+ E K+ ++ ++ I G+E ++D+ +
Sbjct: 509 ARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCT----CMVDLLGRA 564
Query: 281 GSIRSAYQLYRSMLKTDI 298
G + A +L ++ I
Sbjct: 565 GKLNEALELISEFPQSAI 582
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 188/390 (48%), Gaps = 8/390 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D +T S L+ + +H + + G + H+ T ++ Y+K GD+ SA+ F
Sbjct: 211 DSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLF 270
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
DRM ++V++ A+ISGY+ NG E+++ +F + SG R N T + + +
Sbjct: 271 DRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHEL 330
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
R + + K R + V +AL LY + +E A +F+ + K + SWNAMI G A
Sbjct: 331 LARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYA 390
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLESS 266
G + + LF+ M ++P+ T+ S L A +G + L K +H +I K LE +
Sbjct: 391 QNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGK--WVHRIISKEKLELN 448
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ +LID+YAK GSI A ++ M +++S A+ISG+ EA L+KDM+
Sbjct: 449 VYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGL-HGQGAEALKLYKDML 507
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQI-HAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
++ ++ C++ ++ G+++ +Y+ + ++D+ ++G++
Sbjct: 508 DARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKL 567
Query: 386 ADANRAFDEMGDKNVIS--WTSLIAGYAKH 413
+A E + W +L+ H
Sbjct: 568 NEALELISEFPQSAIGPGVWGALLGACMVH 597
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 88/189 (46%), Gaps = 3/189 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
+P T S L C A +H I E N+++ T +I YAK G + AR F
Sbjct: 413 NPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIF 472
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL- 147
DRM +NVVSW AMISGY +G AL ++ ML + + T+ S + AC+ +
Sbjct: 473 DRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVD 532
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS--WNAMIG 205
+G ++ + + R + + ++DL + G + +A L + + W A++G
Sbjct: 533 EGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLG 592
Query: 206 GLAMQGFND 214
+ +D
Sbjct: 593 ACMVHKNSD 601
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 189/587 (32%), Positives = 306/587 (52%), Gaps = 38/587 (6%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYA--KVGDVLS 83
L+ + +SLL+ C ++ IHA +I+ G S+ ++++ F A + ++
Sbjct: 50 VLIQSNPLLSLLEACTSMAKMKE---IHAQMISTGLISDGFALSRLVAFCAISEWRNLDY 106
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG-VRANQFTYSSALRACA 142
K + NV SW I GY ++ NA+L++ MLR G + +TY + CA
Sbjct: 107 CDKILNNAANLNVFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCA 166
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
I G + + F +LFV +A++ + CG + A LF+ +D+VSWN+
Sbjct: 167 GFSLSWTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNS 226
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
+I G G D++F L+ M + PD T+ ++ AS L ++H I ++G
Sbjct: 227 IINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMG 286
Query: 263 LESSNKLTGSLIDVY-------------------------------AKYGSIRSAYQLYR 291
L + L +L+D+Y AK+G + SA +L+
Sbjct: 287 LNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFN 346
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
M + D++ ALI GF + SKEA LF +M + D + + L+ C+ + +L+
Sbjct: 347 EMPEKDVVLWNALIGGFVQA-KRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALD 405
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
+G +H + K+ + + A+G AL+DMYAK G I A + F+EM +N ++WT++I G A
Sbjct: 406 VGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLA 465
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
HG H AI + +M G+VP+++TF+ +L AC H GL +G + F M +KY I P+
Sbjct: 466 LHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKL 525
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
+H+SC+VDL R G LE A +IR M +P A +W A+ I+GN +GE AA L +
Sbjct: 526 KHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLE 585
Query: 532 MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
++P YV+L+N+Y A W+ ARK RK+MEER + K PG S ++
Sbjct: 586 LDPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIE 632
>gi|449496714|ref|XP_004160205.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g11290-like [Cucumis sativus]
Length = 616
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 174/528 (32%), Positives = 291/528 (55%), Gaps = 3/528 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H+ II G+ N ++ T ++ Y K + A K FD M +VV+W ++++GY Q GY
Sbjct: 90 VHSTIIKLGFSLNPYIFTALVDMYGKCWSISDAHKVFDEMSCPSVVTWNSLVTGYLQAGY 149
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
A+ +F ML+ G+ F+ S L C++++ G + K RF N+ V +
Sbjct: 150 PLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKGDLGSQLHAMSLKLRFSSNVVVGTG 209
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+D+Y+KC ++D+ +F+ + K+V +W +MI G A ++ L R M+ ++P+
Sbjct: 210 LIDMYSKCCNLQDSRRVFDIMLNKNVFTWTSMISGYARNQLPHEAMXLMREMLHLNLEPN 269
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAK-YGSIRSAYQLY 290
T S+L + K QIH II G ES+N + +L+ Y++ GS+ ++
Sbjct: 270 GMTYNSLLSSFSCPRHFDKCKQIHCRIITEGYESNNYIAVTLVTAYSECCGSLEDYRKVC 329
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
++ +D IS A+I+GF + +EA + F M +K +D + ++L
Sbjct: 330 SNIRMSDQISWNAVIAGFT-NLGIGEEALECFIQMRREKFDVDFFTFTSIFKAIGMTSAL 388
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
G+QIH +K + + +V N L+ MYA+SG I D+ F M + ++ISW SL++G
Sbjct: 389 EEGKQIHGLVYKTGYTLNLSVQNGLVSMYARSGAIRDSKMVFSMMNEHDLISWNSLLSGC 448
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRI-LP 469
A HG G EAI+L++KM+ + P++ +FL++L ACSH GL +G E F M N + P
Sbjct: 449 AYHGCGEEAIDLFEKMRRTCIKPDNTSFLAVLTACSHVGLLDKGLEYFKLMRNSELVEPP 508
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
+ EH++ +VDLF R G+L A I + I+P S++ A+L AC I+GN + A+ L
Sbjct: 509 KLEHYATLVDLFGRAGKLYEAEAFIESIPIEPGISIYKALLSACLIHGNKDIAIRTAKKL 568
Query: 530 FDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
++ P Y++LSN G WD+A R+LM R ++K PG+S++
Sbjct: 569 LELYPYDPATYIMLSNALGRDGYWDDAASIRRLMSNRGVKKEPGFSWM 616
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 219/461 (47%), Gaps = 21/461 (4%)
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
+LR G + + C + L G + +I K F N ++ +AL+D+Y KC
Sbjct: 59 LLRHGSPPTPPILTKTISICTKSTLLDFGIQVHSTIIKLGFSLNPYIFTALVDMYGKCWS 118
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
I DA +F+ + VV+WN+++ G G+ + LF M+++G++P F+L L
Sbjct: 119 ISDAHKVFDEMSCPSVVTWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPFSLSGGL-- 176
Query: 242 SVGGIELMK---ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
VG +L K SQ+H + +KL S+ + LID+Y+K +++ + +++ ML ++
Sbjct: 177 -VGCSQLQKGDLGSQLHAMSLKLRFSSNVVVGTGLIDMYSKCCNLQDSRRVFDIMLNKNV 235
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
+ T++ISG+AR + EA L ++M+ + + + +L+ + + +QIH
Sbjct: 236 FTWTSMISGYAR-NQLPHEAMXLMREMLHLNLEPNGMTYNSLLSSFSCPRHFDKCKQIHC 294
Query: 359 FAFKYQSSYDAAVGNALIDMYAK-SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
+ + L+ Y++ G + D + + + ISW ++IAG+ G G
Sbjct: 295 RIITEGYESNNYIAVTLVTAYSECCGSLEDYRKVCSNIRMSDQISWNAVIAGFTNLGIGE 354
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
EA+E + +M+ E + TF S+ A T EG ++ ++ K + +
Sbjct: 355 EALECFIQMRREKFDVDFFTFTSIFKAIGMTSALEEGKQIH-GLVYKTGYTLNLSVQNGL 413
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD------ 531
V ++AR G + + + MN S W+++L C+ +G GE A +LF+
Sbjct: 414 VSMYARSGAIRDSKMVFSMMNEHDLIS-WNSLLSGCAYHG---CGE-EAIDLFEKMRRTC 468
Query: 532 MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNP 572
++P+ + VL+ + G D + KLM L + P
Sbjct: 469 IKPDNTSFLAVLTAC-SHVGLLDKGLEYFKLMRNSELVEPP 508
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 91/190 (47%), Gaps = 3/190 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D T+ S+ + A + IH + GY NL + ++ YA+ G + ++
Sbjct: 370 VDFFTFTSIFKAIGMTSALEEGKQIHGLVYKTGYTLNLSVQNGLVSMYARSGAIRDSKMV 429
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F M E +++SW +++SG A +G E A+ +F M R+ ++ + ++ + L AC+ + L
Sbjct: 430 FSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRTCIKPDNTSFLAVLTACSHVGLL 489
Query: 148 QGGRMIQGSIQKGRFVE--NLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS-WNAMI 204
G ++ VE L + L+DL+ + G + +A E I + +S + A++
Sbjct: 490 DKGLEYFKLMRNSELVEPPKLEHYATLVDLFGRAGKLYEAEAFIESIPIEPGISIYKALL 549
Query: 205 GGLAMQGFND 214
+ G D
Sbjct: 550 SACLIHGNKD 559
>gi|15217514|ref|NP_177305.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169720|sp|Q9C9I6.1|PP116_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g71490
gi|12323739|gb|AAG51835.1|AC016163_24 unknown protein; 40702-42747 [Arabidopsis thaliana]
gi|56381899|gb|AAV85668.1| At1g71490 [Arabidopsis thaliana]
gi|56790238|gb|AAW30036.1| At1g71490 [Arabidopsis thaliana]
gi|332197086|gb|AEE35207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 681
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 192/610 (31%), Positives = 323/610 (52%), Gaps = 43/610 (7%)
Query: 8 FKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHL 67
FKT L + S D +L + SLL C+D +A +HAH I++G E + L
Sbjct: 23 FKTFSLLRLQSSSAVSDDLVLHSAA--SLLSACVDVRAFLAGVQVHAHCISSGVEYHSVL 80
Query: 68 STKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV 127
K++ FY+ A+ + + + W +I+ YA+N E + + M+ G+
Sbjct: 81 VPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGI 140
Query: 128 RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWI 187
R + FTY S L+AC + GR++ GSI+ + +L+V +AL+ +Y + + A
Sbjct: 141 RPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARR 200
Query: 188 LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFT------------- 234
LF+R+ +D VSWNA+I A +G ++F LF M G++ T
Sbjct: 201 LFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGN 260
Query: 235 ----LGSILR--------------------ASVGGIELMKISQIHDLIIKLGLESSNKLT 270
LG I R + +G I L K +IH L I + + +
Sbjct: 261 YVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGK--EIHGLAIHSSYDGIDNVR 318
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
+LI +Y+K +R A ++R + + + ++ISG+A+ N S+EA L ++M++
Sbjct: 319 NTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQL-NKSEEASHLLREMLVAGF 377
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYD-AAVGNALIDMYAKSGEIADAN 389
+ + L +L +CA +A+L G++ H + + + D + N+L+D+YAKSG+I A
Sbjct: 378 QPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAK 437
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
+ D M ++ +++TSLI GY G G A+ L+K+M G+ P+ VT +++L ACSH+
Sbjct: 438 QVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSK 497
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
L EG LF M +Y I P +HFSC+VDL+ R G L A ++I M KP+ + W+ +
Sbjct: 498 LVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATL 557
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
L AC I+GNT +G+ AA L +M+PE YV+++N+Y AAG+W + R +M + ++
Sbjct: 558 LNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVK 617
Query: 570 KNPGYSFLQS 579
K+PG +++ +
Sbjct: 618 KDPGCAWIDT 627
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 172/554 (31%), Positives = 308/554 (55%), Gaps = 3/554 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T S+L+ C + + +IH I G + ++ ++ ++ Y K ++ R+ F
Sbjct: 274 DSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIF 333
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D+M R+ VSW MI GY+Q G E ++ +F M+ + + T +S L+AC + L+
Sbjct: 334 DKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLE 392
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ + + + + + L+++YAKCG + + +F ++ KD VSWN+MI
Sbjct: 393 FGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYI 452
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G D++ LF+ MM+ +KPD T +L S +L ++H + K+G S+
Sbjct: 453 QNGSFDEAMKLFK-MMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIV 511
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
++ +L+D+YAK G + + +++ +M DII+ +I+ ++ + M +
Sbjct: 512 VSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSED-CNLGLRMISRMRTE 570
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ D + +L +C+ +A+ G++IH FK D VGN LI+MY+K G + ++
Sbjct: 571 GVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNS 630
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ F M K+V++WT+LI+ +G G +A+ + +M+ G+VP+ V F++++FACSH+
Sbjct: 631 FQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHS 690
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
GL EG F M Y+I PR EH++CVVDL +R L+ A + I M +KP +S+W A
Sbjct: 691 GLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGA 750
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L AC + G+T + + + + ++ P+ + YV++SN+Y A G WD R RK ++ R L
Sbjct: 751 LLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQVRSIRKSIKARGL 810
Query: 569 RKNPGYSFLQSSKK 582
+K+PG S+++ K
Sbjct: 811 KKDPGCSWMEIQNK 824
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 162/536 (30%), Positives = 282/536 (52%), Gaps = 14/536 (2%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITN 59
+I+RA G +AL L P TY S++ C A IH ++
Sbjct: 144 SIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXM 203
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G+ S+L++ +I Y + D+ ARK F+ MP R+VVSW ++ISGY NGY AL ++
Sbjct: 204 GFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIY 263
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
GV + +T SS LRAC + ++ G +I G I+K +++ V + LL +Y K
Sbjct: 264 YRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKF 323
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
+ D +F+++ +D VSWN MI G + G ++S LF M+ Q KPD T+ SIL
Sbjct: 324 NGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSIL 382
Query: 240 RAS--VGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
+A +G +E K +HD +I G E + LI++YAK G++ ++ +++ M D
Sbjct: 383 QACGHLGDLEFGK--YVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKD 440
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
+S ++I+ + ++ + EA LFK M+ + D V ++L++ + L LG+++H
Sbjct: 441 SVSWNSMINVYIQNGSFD-EAMKLFK-MMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELH 498
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
K + + V N L+DMYAK GE+ D+ + F+ M +++I+W ++IA +
Sbjct: 499 CDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCN 558
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
+ + +M+ EG+ P+ T LS+L CS +G E+ I K + + +
Sbjct: 559 LGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIH-GCIFKLGLESDVPVGNVL 617
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDME 533
++++++ G L +++ + + M K + W+A++ AC +YG G+ A R +ME
Sbjct: 618 IEMYSKCGSLRNSFQVFKLMKTKDVVT-WTALISACGMYGE---GKKAVRAFGEME 669
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 241/477 (50%), Gaps = 8/477 (1%)
Query: 48 QAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM--PERNVVSWTAMISG 105
Q H +H+ IIT G ++ S K+I YA D S+ F R+ P NV W ++I
Sbjct: 90 QLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVF-RLASPSNNVYXWNSIIRA 148
Query: 106 YAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVEN 165
NG AL ++S R ++ + +T+ S + ACA + + + I + F +
Sbjct: 149 LTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSD 208
Query: 166 LFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR 225
L++ +AL+D+Y + ++ A +FE + +DVVSWN++I G G+ +++ ++
Sbjct: 209 LYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRN 268
Query: 226 QGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRS 285
G+ PD +T+ S+LRA G + + IH LI K+G++ + L+ +Y K+ +
Sbjct: 269 LGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLID 328
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
+++ M+ D +S +I G+++ + +E+ LF +M+ + D + + +L C
Sbjct: 329 GRRIFDKMVLRDAVSWNTMICGYSQVGLY-EESIKLFMEMV-NQFKPDLLTITSILQACG 386
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
++ L G+ +H + D N LI+MYAK G + + F M K+ +SW S
Sbjct: 387 HLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNS 446
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
+I Y ++G EA++L+K MK + + P+ VT++ LL + G G EL D+ K
Sbjct: 447 MINVYIQNGSFDEAMKLFKMMKTD-VKPDSVTYVMLLSMSTQLGDLXLGKELHCDLA-KM 504
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLG 522
+ +VD++A+ G++ + + M + + W+ I+ +C + +LG
Sbjct: 505 GFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIIT-WNTIIASCVHSEDCNLG 560
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 173/393 (44%), Gaps = 66/393 (16%)
Query: 237 SILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR-SMLK 295
SI RA ++ ++H LII LGL S + LI YA + S++ ++R +
Sbjct: 77 SISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPS 136
Query: 296 TDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQ 355
++ ++I + S EA L+ + ++ D ++N CA + + +
Sbjct: 137 NNVYXWNSIIRALTHNGLFS-EALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKS 195
Query: 356 IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGY 415
IH D +GNALIDMY + ++ A + F+EM ++V+SW SLI+GY +GY
Sbjct: 196 IHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGY 255
Query: 416 GHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG--------------------- 454
+EA+E+Y + ++ G+VP+ T S+L AC G EG
Sbjct: 256 WNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNG 315
Query: 455 ----WELFTDMINKYRILPR-----AEHFSCVVDLFARRGQLESAYNMIRQM--NIKPTA 503
+ F +I+ RI + A ++ ++ +++ G E + + +M KP
Sbjct: 316 LLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDL 375
Query: 504 SLWSAILGACSIYGNTSLGE-------------------------------LAARNLFD- 531
++IL AC G+ G+ LA++ +F
Sbjct: 376 LTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSG 435
Query: 532 MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
M+ + SV++ + N+Y G++D A K K+M+
Sbjct: 436 MKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMK 468
>gi|357128066|ref|XP_003565697.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Brachypodium distachyon]
Length = 564
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 181/527 (34%), Positives = 294/527 (55%), Gaps = 23/527 (4%)
Query: 68 STKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV 127
+T +I G + AR FD MP+R+VV+WTAM+SGYA NG AL +F ML +GV
Sbjct: 6 ATTLIKSLCAGGALRHARAVFDEMPDRDVVAWTAMLSGYASNGCHSYALDLFRRMLAAGV 65
Query: 128 RANQFTYSSALRACARMRWLQGGRMIQG-------SIQKGRFVENL-FVKSALLDLYAKC 179
N+FT SS L AC +GG G ++ R V+++ +V +AL++ YA C
Sbjct: 66 GPNEFTLSSVLTAC------RGGAADGGCEPSSLHAVAVRRGVDHMPYVVNALIEAYASC 119
Query: 180 G---WIEDAWILFERI-ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTL 235
+E++ LF+ + + SW +M+ G + G LF++M++ G++ FT
Sbjct: 120 EEGVGVEESRKLFDALGSGRTAASWTSMVAGYSRWGQEQTGLQLFQTMIQDGIELSPFTC 179
Query: 236 GSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLK 295
L A L Q+H L ++ ++ + SLID+Y ++ A +L+ + +
Sbjct: 180 SIALHACASIANLCVGQQLHVLCLRKAFNANLTVANSLIDMYCSCANLLDARRLFDEIPE 239
Query: 296 TDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQ 355
++++ +I+ +++ NH A L ++M L+ + L + + CA +ASL G+Q
Sbjct: 240 RNLVTWNTMIAWYSQC-NHLM-ALQLLREMNLQP---NCFTLTSITSACAGLASLRFGQQ 294
Query: 356 IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGY 415
+H A + D + NAL+DMY+K G IA+A + F+ M K+ +SWTS+I GY +GY
Sbjct: 295 VHGAALRRNYGKDLQMCNALVDMYSKCGSIANAKKMFNMMDYKDKLSWTSMITGYGMNGY 354
Query: 416 GHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFS 475
+E+I+L+ M H G+ P+ V FL L+ AC+H GL EGW F M ++Y + P E +
Sbjct: 355 ANESIQLFTSMIHAGVHPDHVVFLGLICACNHGGLVDEGWNFFRSMTSEYNLQPNKEIYG 414
Query: 476 CVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPE 535
CV +L AR G+L A+++I +M P ++W A+LGAC ++ N LG LAAR + ++ P+
Sbjct: 415 CVTNLLARAGRLREAFDLIHRMPFAPDETVWGALLGACKMHKNVELGRLAARKIIEINPD 474
Query: 536 KSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
++ YV+L+NIY A W TR+L+ RK G S++ + K
Sbjct: 475 RAKTYVLLANIYAAGNKWGEYADTRRLLRGIGSRKEAGTSWIDVTDK 521
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 138/267 (51%), Gaps = 5/267 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L P T L C +H + + +NL ++ +I Y ++L AR+
Sbjct: 174 LSPFTCSIALHACASIANLCVGQQLHVLCLRKAFNANLTVANSLIDMYCSCANLLDARRL 233
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD +PERN+V+W MI+ Y+Q N L+ + ++ N FT +S ACA + L
Sbjct: 234 FDEIPERNLVTWNTMIAWYSQC----NHLMALQLLREMNLQPNCFTLTSITSACAGLASL 289
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G+ + G+ + + ++L + +AL+D+Y+KCG I +A +F ++ KD +SW +MI G
Sbjct: 290 RFGQQVHGAALRRNYGKDLQMCNALVDMYSKCGSIANAKKMFNMMDYKDKLSWTSMITGY 349
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFT-LGSILRASVGGIELMKISQIHDLIIKLGLESS 266
M G+ ++S LF SM+ G+ PD LG I + GG+ + + + L+ +
Sbjct: 350 GMNGYANESIQLFTSMIHAGVHPDHVVFLGLICACNHGGLVDEGWNFFRSMTSEYNLQPN 409
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSM 293
++ G + ++ A+ G +R A+ L M
Sbjct: 410 KEIYGCVTNLLARAGRLREAFDLIHRM 436
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 147/335 (43%), Gaps = 37/335 (11%)
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ K +LI G++R A ++ M D+++ TA++SG+A + HS A DLF+ M
Sbjct: 2 AQKHATTLIKSLCAGGALRHARAVFDEMPDRDVVAWTAMLSGYASNGCHSY-ALDLFRRM 60
Query: 326 ILKKMGIDDVILCLMLNICANVASLN--LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
+ +G ++ L +L C A+ +HA A + + V NALI+ YA
Sbjct: 61 LAAGVGPNEFTLSSVLTACRGGAADGGCEPSSLHAVAVRRGVDHMPYVVNALIEAYASCE 120
Query: 384 E---IADANRAFDEMGD-KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFL 439
E + ++ + FD +G + SWTS++AGY++ G ++L++ M +G+ + T
Sbjct: 121 EGVGVEESRKLFDALGSGRTAASWTSMVAGYSRWGQEQTGLQLFQTMIQDGIELSPFTCS 180
Query: 440 SLLFACSHTGLTCEGWELFTDMINKY--RILPRAE-----HFSCVVDLFARR-------- 484
L AC+ C G +L + K L A + SC L ARR
Sbjct: 181 IALHACASIANLCVGQQLHVLCLRKAFNANLTVANSLIDMYCSCANLLDARRLFDEIPER 240
Query: 485 ------------GQLES--AYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
Q A ++R+MN++P ++I AC+ + G+
Sbjct: 241 NLVTWNTMIAWYSQCNHLMALQLLREMNLQPNCFTLTSITSACAGLASLRFGQQVHGAAL 300
Query: 531 DMEPEKSVNYV-VLSNIYTAAGAWDNARKTRKLME 564
K + L ++Y+ G+ NA+K +M+
Sbjct: 301 RRNYGKDLQMCNALVDMYSKCGSIANAKKMFNMMD 335
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 88/187 (47%), Gaps = 4/187 (2%)
Query: 28 LDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
L P+ T S+ C + R +H + Y +L + ++ Y+K G + +A+
Sbjct: 269 LQPNCFTLTSITSACAGLASLRFGQQVHGAALRRNYGKDLQMCNALVDMYSKCGSIANAK 328
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
K F+ M ++ +SWT+MI+GY NGY ++ +F++M+ +GV + + + AC
Sbjct: 329 KMFNMMDYKDKLSWTSMITGYGMNGYANESIQLFTSMIHAGVHPDHVVFLGLICACNHGG 388
Query: 146 WL-QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAM 203
+ +G + + N + + +L A+ G + +A+ L R+ D W A+
Sbjct: 389 LVDEGWNFFRSMTSEYNLQPNKEIYGCVTNLLARAGRLREAFDLIHRMPFAPDETVWGAL 448
Query: 204 IGGLAMQ 210
+G M
Sbjct: 449 LGACKMH 455
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 179/557 (32%), Positives = 304/557 (54%), Gaps = 9/557 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T S+L C A ++ +H I G ++ + ++ Y K + AR+ F
Sbjct: 221 DCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVF 280
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+M ++ V+W MI GYAQ G E ++ +F M+ G + + +S +RAC + LQ
Sbjct: 281 SKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMI-DGFVPDMLSITSTIRACGQSGDLQ 339
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ + + F + + L+D+YAKCG + A +F+ + KD V+WN++I G
Sbjct: 340 VGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYT 399
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ---IHDLIIKLGLES 265
G+ + F+ MM+ KPD T +L S+ +L I+Q IH +IK G E+
Sbjct: 400 QSGYYKEGLESFK-MMKMERKPDSVTF--VLLLSIFS-QLADINQGRGIHCDVIKFGFEA 455
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ SL+DVYAK G + +++ M DIIS +I+ D+ + F + +M
Sbjct: 456 ELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTV-GFQMINEM 514
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ + D+ + +L +C+ +A G++IH + FK + +GNALI+MY+K G +
Sbjct: 515 RTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSL 574
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
+ + F M +K+V++WT+LI+ + +G G +A++ ++ M+ G++P+ V F++ +FAC
Sbjct: 575 ENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFAC 634
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
SH+G+ EG F M Y + PR EH++CVVDL AR G L A I M +KP ASL
Sbjct: 635 SHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASL 694
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
W A+L AC GNT++ + ++ + ++ + + YV++SNIY G WD + R M+
Sbjct: 695 WGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKT 754
Query: 566 RSLRKNPGYSFLQSSKK 582
+ L+K PG S+++ K+
Sbjct: 755 KGLKKEPGSSWIEIQKR 771
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/489 (28%), Positives = 247/489 (50%), Gaps = 6/489 (1%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM-PE 93
SLL+ K Q +H+ IIT+G ++ S K+I YA+V D +S+ F + P
Sbjct: 24 SLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPT 83
Query: 94 RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMI 153
NV W ++I NG AL ++ M ++ + FT+ S + +CAR+ L+ G ++
Sbjct: 84 NNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIV 143
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN 213
+ F +L++ +AL+D+Y++ +++A +FE + +D VSWN++I G GF
Sbjct: 144 HEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFW 203
Query: 214 DDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSL 273
+D+ ++ GM PDCFT+ S+L A + + + +H +I K+G+ + L
Sbjct: 204 EDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGL 263
Query: 274 IDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGID 333
+ +Y K+ +R A +++ M D ++ +I G+A+ H + + LF DMI D
Sbjct: 264 LSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRH-EASVKLFMDMI-DGFVPD 321
Query: 334 DVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFD 393
+ + + C L +G+ +H + D N LIDMYAK G++ A FD
Sbjct: 322 MLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFD 381
Query: 394 EMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCE 453
K+ ++W SLI GY + GY E +E +K MK E P+ VTF+ LL S +
Sbjct: 382 TTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERK-PDSVTFVLLLSIFSQLADINQ 440
Query: 454 GWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGAC 513
G + D+I K+ + ++D++A+ G+++ + M+ S W+ ++ +
Sbjct: 441 GRGIHCDVI-KFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIIS-WNTVIASS 498
Query: 514 SIYGNTSLG 522
+ + ++G
Sbjct: 499 VHFDDCTVG 507
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 145/303 (47%), Gaps = 11/303 (3%)
Query: 233 FTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRS 292
F S+L+ ++ +H LII GL S +G LI YA+ S+ ++RS
Sbjct: 20 FLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRS 79
Query: 293 MLKTDIISCTALISGFARDDNHS---KEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ T+ + L + R H+ +A + +M KK+ D ++N CA +
Sbjct: 80 ISPTNNV---YLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILD 136
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
L LG +H A + D +GNALIDMY++ ++ +A F+EM +++ +SW SLI+G
Sbjct: 137 LELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISG 196
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
Y +G+ +A+++Y K + GMVP+ T S+L AC EG + +I K I
Sbjct: 197 YCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVH-GVIEKIGIAG 255
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
+ ++ ++ + +L A + +M +K + + + I G Y E + +
Sbjct: 256 DVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICG----YAQLGRHEASVKLF 311
Query: 530 FDM 532
DM
Sbjct: 312 MDM 314
>gi|242067895|ref|XP_002449224.1| hypothetical protein SORBIDRAFT_05g006590 [Sorghum bicolor]
gi|241935067|gb|EES08212.1| hypothetical protein SORBIDRAFT_05g006590 [Sorghum bicolor]
Length = 570
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 179/534 (33%), Positives = 287/534 (53%), Gaps = 12/534 (2%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IHA I G +NL +T +I A + AR+ FD P R+ W ++ +A +
Sbjct: 35 IHARAIVLGVSANLAFATSLIAGAAP-ASLAYARRVFDAAPVRDAYMWNTLLRAHAHSHS 93
Query: 112 DE--------NALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFV 163
+AL ++ M +GV + +TY L ACA R + GR + G +
Sbjct: 94 HSQSSHSHAVDALALYKRMRAAGVAPDHYTYPIVLPACAAARQPRLGRAVHGDAVRFALD 153
Query: 164 ENLFVKSALLDLYAKCGWIEDAWILFERIE--RKDVVSWNAMIGGLAMQGFNDDSFWLFR 221
+ FV+ L+ +Y + G + DA ++F + VVSW AM+ G F ++ LF
Sbjct: 154 GDGFVRCTLIAMYFQEGEVADAELVFAESHGSSRTVVSWTAMVAGYVQNYFFGEALALFS 213
Query: 222 SMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYG 281
+M+ +G+ P+ TL S L G L +H +I+ G +++ L +LI +Y K G
Sbjct: 214 TMVAEGVLPNEITLISFLPCLQGQEWLDAGEMVHGFVIRSGFDANIPLANALIAMYGKCG 273
Query: 282 SIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLML 341
SI A L+ M ++S +++ + + + EA F M+ +K+G D V L +L
Sbjct: 274 SIPMAEALFEGMAVRSLVSWNTMVAIYEQHGD-VVEAIKFFHRMLTEKVGFDCVTLVSVL 332
Query: 342 NICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVI 401
+ C +L G+ +H FA + DA +GN L+DMYAK GEIADA + FD + + V+
Sbjct: 333 SACGRSGALETGKWVHEFARSHGLDADARIGNVLVDMYAKCGEIADARKVFDCLHVRGVV 392
Query: 402 SWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM 461
SW+++I+ YA HG EA++L+ MK EG+ PN TF ++L AC H+GL EG + F +
Sbjct: 393 SWSAMISAYANHGDSEEALKLFCLMKSEGVRPNSFTFTAVLVACGHSGLVNEGLKHFNSI 452
Query: 462 INKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSL 521
++ Y++ P EH++C+VD+ R G+L AY +IR M++ P +W A LG C ++ N L
Sbjct: 453 LSDYQMSPTLEHYACIVDMLGRAGRLVEAYEIIRGMSLCPDKCVWGAFLGGCKLHSNLEL 512
Query: 522 GELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYS 575
E A++LF YV++SN+Y AG ++A + R+ M+E L+K G+S
Sbjct: 513 AEFVAKDLFQSGSNDVTFYVLMSNMYFEAGMLEDAERIRRAMKEMELKKTAGHS 566
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 195/422 (46%), Gaps = 15/422 (3%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY +L C + R +H + + + + +I Y + G+V A F
Sbjct: 120 DHYTYPIVLPACAAARQPRLGRAVHGDAVRFALDGDGFVRCTLIAMYFQEGEVADAELVF 179
Query: 89 --DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
R VVSWTAM++GY QN + AL +FS M+ GV N+ T S L W
Sbjct: 180 AESHGSSRTVVSWTAMVAGYVQNYFFGEALALFSTMVAEGVLPNEITLISFLPCLQGQEW 239
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
L G M+ G + + F N+ + +AL+ +Y KCG I A LFE + + +VSWN M+
Sbjct: 240 LDAGEMVHGFVIRSGFDANIPLANALIAMYGKCGSIPMAEALFEGMAVRSLVSWNTMVAI 299
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS--VGGIELMKISQIHDLIIKLGLE 264
G ++ F M+ + + DC TL S+L A G +E K +H+ GL+
Sbjct: 300 YEQHGDVVEAIKFFHRMLTEKVGFDCVTLVSVLSACGRSGALETGK--WVHEFARSHGLD 357
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ ++ L+D+YAK G I A +++ + ++S +A+IS +A + S+EA LF
Sbjct: 358 ADARIGNVLVDMYAKCGEIADARKVFDCLHVRGVVSWSAMISAYANHGD-SEEALKLFCL 416
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
M + + + +L C + +N G + ++ YQ S ++DM ++G
Sbjct: 417 MKSEGVRPNSFTFTAVLVACGHSGLVNEGLKHFNSILSDYQMSPTLEHYACIVDMLGRAG 476
Query: 384 EIADAN---RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
+ +A R DK V W + + G H A + K + G NDVTF
Sbjct: 477 RLVEAYEIIRGMSLCPDKCV--WGAFLGGCKLHSNLELAEFVAKDLFQSG--SNDVTFYV 532
Query: 441 LL 442
L+
Sbjct: 533 LM 534
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 111/245 (45%), Gaps = 22/245 (8%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ G + +A+KF + D T +S+L C A +H ++G +++
Sbjct: 302 QHGDVVEAIKFFHRMLTEKVGFDCVTLVSVLSACGRSGALETGKWVHEFARSHGLDADAR 361
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ ++ YAK G++ ARK FD + R VVSW+AMIS YA +G E AL +F M G
Sbjct: 362 IGNVLVDMYAKCGEIADARKVFDCLHVRGVVSWSAMISAYANHGDSEEALKLFCLMKSEG 421
Query: 127 VRANQFTYSSALRACARMRWL-QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
VR N FT+++ L AC + +G + + + L + ++D+ + G + +A
Sbjct: 422 VRPNSFTFTAVLVACGHSGLVNEGLKHFNSILSDYQMSPTLEHYACIVDMLGRAGRLVEA 481
Query: 186 WILFERIER-KDVVSWNAMIGG----------------LAMQGFNDDSFWLFRSMM--RQ 226
+ + + D W A +GG L G ND +F++ S M
Sbjct: 482 YEIIRGMSLCPDKCVWGAFLGGCKLHSNLELAEFVAKDLFQSGSNDVTFYVLMSNMYFEA 541
Query: 227 GMKPD 231
GM D
Sbjct: 542 GMLED 546
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 193/593 (32%), Positives = 319/593 (53%), Gaps = 45/593 (7%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGD---VLS 83
LL+ + + LL+ C K+ +Q IHA I NG + +++I F++ +G +
Sbjct: 6 LLENPSSLCLLESC---KSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDH 62
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV-RANQFTYSSALRACA 142
+R F ++ N+ W MI GY+++ A++++ +M+ G+ N FT+ L +CA
Sbjct: 63 SRLLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCA 122
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
R+ L+ G + I K F +LFV++AL+ LY+ G + A LF+ +D+VS+N
Sbjct: 123 RLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNT 182
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIK-- 260
MI G A + + LF M G+ PD FT ++ E QIH + K
Sbjct: 183 MIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNL 242
Query: 261 LGLESSNKLTGSLIDVYAKYG--------------------------------SIRSAYQ 288
++S+ L +++D+YAK G I A +
Sbjct: 243 RSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARK 302
Query: 289 LYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
L+ M + D+IS TA+ISG+++ S EA +LFK+M + D+V L +L+ CA +
Sbjct: 303 LFNHMHERDVISWTAMISGYSQAGQCS-EALELFKEMEALGIKPDEVTLVAVLSACARLG 361
Query: 349 SLNLGRQI-HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD--KNVISWTS 405
+ +LG+++ H + + + + A++DMYAK G I A F +G K + S
Sbjct: 362 AFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNS 421
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
+IAG A+HG G AI +++++ G+ P++VTF+ +L AC H+GL EG +LF M N Y
Sbjct: 422 MIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAY 481
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
I P+ EH+ C+VDL R G LE AY+++++M + + +W A+L AC +GN +GE+A
Sbjct: 482 GIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIA 541
Query: 526 ARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+ L +ME + YV+LSNI A W+ AR+ RK+ME+ +RK PG+S+++
Sbjct: 542 GQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIE 594
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 183/559 (32%), Positives = 301/559 (53%), Gaps = 45/559 (8%)
Query: 57 ITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENAL 116
I GYE ++ + + ++ Y + G + A F+ MPERN SWT MI+ +AQ G ++A+
Sbjct: 388 IKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAI 447
Query: 117 LVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLY 176
++ + V T ++ + A A++ +Q R+I I N+ +A++ Y
Sbjct: 448 QLYERVPEQTVA----TKTAMMTAYAQVGRIQKARLIFDEI----LNPNVVAWNAIIAGY 499
Query: 177 AKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLG 236
+ G +++A LF+++ K+ SW AMI G + ++ L + R G P +
Sbjct: 500 TQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFT 559
Query: 237 SILR--ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRS-- 292
S L A++G +E+ ++ IH L IK G + ++ + LI +YAK G++ ++R+
Sbjct: 560 SALSACANIGDVEIGRV--IHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIR 617
Query: 293 -----------------------------MLKTDIISCTALISGFARDDNHSKEAFDLFK 323
M K D++S TA+IS + + H + A DLF
Sbjct: 618 VKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQ-AGHGEVALDLFL 676
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
DM+ + + + + + +L+ C N+ ++ LG Q HA FK VGN+LI MY K G
Sbjct: 677 DMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG 736
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
D F+EM + ++I+W +++ G A++G G EAI+++++M+ EG++P+ ++FL +L
Sbjct: 737 -YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLC 795
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
ACSH GL EGW F M KY I+P H++C+VDL R G L A +I M +KP +
Sbjct: 796 ACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDS 855
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
+W A+LGAC I+ N LG+ A LF M KS YV+LSN++ + G WD + RKLM
Sbjct: 856 VIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLM 915
Query: 564 EERSLRKNPGYSFLQSSKK 582
+++ L K PG S++Q K
Sbjct: 916 KDQGLTKEPGISWIQVKNK 934
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 142/508 (27%), Positives = 235/508 (46%), Gaps = 52/508 (10%)
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSA 121
E N+ V+ Y + AR+ FD+MPERN VSW MISGY A VF
Sbjct: 292 EKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVK 351
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQ-GGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M R+ R +Q + L A + L+ G + +I+ G + ++ V SA+L+ Y + G
Sbjct: 352 MCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTG-YEGDVVVGSAILNAYTRNG 410
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
++ A FE + ++ SW MI A G DD+ L+ + Q + + +
Sbjct: 411 SLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAY-- 468
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
A VG I+ ++ I D I+ + + N ++I Y + G ++ A L++ M + S
Sbjct: 469 AQVGRIQKARL--IFDEILNPNVVAWN----AIIAGYTQNGMLKEAKDLFQKMPVKNSAS 522
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
A+I+GF +++ S+EA +L ++ D L+ CAN+ + +GR IH+ A
Sbjct: 523 WAAMIAGFVQNE-ESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLA 581
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIA-------------------------------DAN 389
K +++ V N LI MYAK G + DA
Sbjct: 582 IKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDAR 641
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
F++M ++V+SWT++I+ Y + G+G A++L+ M G+ PN +T SLL AC + G
Sbjct: 642 VVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLG 701
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL--WS 507
G E F +I K + ++ ++ + G E + + +M P L W+
Sbjct: 702 AIKLG-EQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEM---PEHDLITWN 756
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPE 535
A+L C+ G LG+ A + ME E
Sbjct: 757 AVLVGCAQNG---LGKEAIKIFEQMEVE 781
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 132/528 (25%), Positives = 244/528 (46%), Gaps = 55/528 (10%)
Query: 76 AKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYS 135
++G V AR+ F+ M +R+VVSW +MI+GY+QNG + A L+F A + +R T++
Sbjct: 182 GRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIR----TWT 237
Query: 136 SALRACARMRWLQGGR----------------MIQGSIQKGRF-----------VENLFV 168
L A+ ++ R MI G +Q G +N+
Sbjct: 238 ILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVAS 297
Query: 169 KSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGM 228
++++ Y C + +A LF+++ ++ VSW MI G +++ +F M R
Sbjct: 298 WNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVA 357
Query: 229 KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQ 288
+PD +L A G +L I + + IK G E + ++++ Y + GS+ A
Sbjct: 358 RPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMH 417
Query: 289 LYRSMLKTDIISCTALISGFAR----DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNIC 344
+ +M + + S T +I+ FA+ DD A L++ + + + M+
Sbjct: 418 FFETMPERNEYSWTTMIAAFAQCGRLDD-----AIQLYERVPEQTVATKTA----MMTAY 468
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWT 404
A V + R I F + + NA+I Y ++G + +A F +M KN SW
Sbjct: 469 AQVGRIQKARLI----FDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWA 524
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK 464
++IAG+ ++ EA+EL ++ G VP+D +F S L AC++ G E + + K
Sbjct: 525 AMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIG-DVEIGRVIHSLAIK 583
Query: 465 YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGEL 524
+ + ++ ++A+ G +E ++ R + +K T S W++++ S N L +
Sbjct: 584 TGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVS-WNSLISGLS--ENYMLDD- 639
Query: 525 AARNLFDMEPEKS-VNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKN 571
AR +F+ P++ V++ + + Y AG + A M R ++ N
Sbjct: 640 -ARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPN 686
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 211/447 (47%), Gaps = 45/447 (10%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGY 61
++ A + G+L A++ P+ + T M + + ++A LI I+
Sbjct: 432 TMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRI--QKARLIFDEILN--- 486
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSA 121
N+ +I Y + G + A+ F +MP +N SW AMI+G+ QN AL +
Sbjct: 487 -PNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIE 545
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
+ RSG + +++SAL ACA + ++ GR+I K N +V + L+ +YAKCG
Sbjct: 546 LHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGN 605
Query: 182 IE-------------------------------DAWILFERIERKDVVSWNAMIGGLAMQ 210
+E DA ++FE++ ++DVVSW A+I
Sbjct: 606 VEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQA 665
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGLESSNK 268
G + + LF M+ +G+KP+ T+ S+L A ++G I+L + Q H LI KLG ++
Sbjct: 666 GHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGE--QFHALIFKLGFDTFLF 723
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ SLI +Y K G + ++ M + D+I+ A++ G A+ + KEA +F+ M ++
Sbjct: 724 VGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQ-NGLGKEAIKIFEQMEVE 781
Query: 329 KMGIDDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ D + +L C++ ++ G ++ KY ++D+ ++G +++
Sbjct: 782 GILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSE 841
Query: 388 ANRAFDEMGDK-NVISWTSLIAGYAKH 413
A + M K + + W +L+ H
Sbjct: 842 AEALIENMPVKPDSVIWEALLGACRIH 868
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 188/392 (47%), Gaps = 48/392 (12%)
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
R G+ K +LF + + + G +E+A +F + ++DVVSWN+MI G +
Sbjct: 156 RHKSGAKNKETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQN 215
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
G D++ LF + + + ++ +T+ A G IE + ++ + + + + S N
Sbjct: 216 GKVDEARLLFDAFVGKNIR--TWTILLTGYAKEGRIE--EAREVFESMTERNVVSWN--- 268
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGF--------ARD--DNHSK---- 316
++I Y + G +++A +L+ M + ++ S ++++G+ AR+ D +
Sbjct: 269 -AMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSV 327
Query: 317 ----------------EAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
EA+D+F M D I ++L+ + L L + A
Sbjct: 328 SWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIA 387
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
K D VG+A+++ Y ++G + A F+ M ++N SWT++IA +A+ G +AI
Sbjct: 388 IKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAI 447
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDL 480
+LY+++ + + T +++ A + G + +F +++N P ++ ++
Sbjct: 448 QLYERVPEQTV----ATKTAMMTAYAQVGRIQKARLIFDEILN-----PNVVAWNAIIAG 498
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
+ + G L+ A ++ ++M +K +AS W+A++
Sbjct: 499 YTQNGMLKEAKDLFQKMPVKNSAS-WAAMIAG 529
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 19/187 (10%)
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
N I + G + +A R F+EM ++V+SW S+I GY+++G EA L+ +
Sbjct: 175 NTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAF----VG 230
Query: 433 PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYN 492
N T+ LL + G E E+F M + + ++ ++ + + G L++A
Sbjct: 231 KNIRTWTILLTGYAKEGRIEEAREVFESMTERNVV-----SWNAMISGYVQNGDLKNARK 285
Query: 493 MIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEK-SVNYVVLSNIYTAAG 551
+ +M K AS S + G C Y + AR LFD PE+ SV+++V+ + Y
Sbjct: 286 LFDEMPEKNVASWNSVVTGYCHCYRMSE-----ARELFDQMPERNSVSWMVMISGYVHIS 340
Query: 552 ----AWD 554
AWD
Sbjct: 341 DYWEAWD 347
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 174/530 (32%), Positives = 292/530 (55%), Gaps = 38/530 (7%)
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
A F+ + E N + W MI G+A + ++L ++ M+ G+ N +T+ L++CA+
Sbjct: 17 ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER------------ 191
+ G+ I G + K F +L+V ++L+ +Y + +EDA+ +F+R
Sbjct: 77 SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTAL 136
Query: 192 -------------------IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDC 232
I KDVVSWNAMI G A G ++ LF MM+ ++PD
Sbjct: 137 ITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDE 196
Query: 233 FTLGSILRASV--GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
T ++L A G IEL + Q+H + G +S+ K+ +LID+Y+K G + +A L+
Sbjct: 197 STYVTVLSACAHSGSIELGR--QVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLF 254
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
+ + D+IS LI G+ N KEA LF++M+ +DV + +L CA++ ++
Sbjct: 255 QGLSYKDVISWNTLIGGYTHM-NLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAI 313
Query: 351 NLGRQIHAFAFKYQSSYDAA--VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA 408
++GR IH + K A + +LIDMYAK G+I A++ F+ M K++ SW ++I
Sbjct: 314 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIF 373
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
G+A HG + +L+ +M+ G+ P+D+TF+ LL ACSH+G+ G +F M Y++
Sbjct: 374 GFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMT 433
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARN 528
P+ EH+ C++DL G + A MI M ++P +W ++L AC ++GN L E A+N
Sbjct: 434 PKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQN 493
Query: 529 LFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
L +EPE +Y++LSNIY +AG W++ + R L+ + ++K PG S ++
Sbjct: 494 LIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIE 543
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 146/453 (32%), Positives = 232/453 (51%), Gaps = 45/453 (9%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVI--------------IF--- 74
T+ LL+ C K + IH ++ G++ +L++ T +I +F
Sbjct: 66 TFPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRS 125
Query: 75 --------------YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
YA GD+ SA+K FD +P ++VVSW AMISGYA+ G + AL +F
Sbjct: 126 SHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFE 185
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M++ VR ++ TY + L ACA ++ GR + + F NL + +AL+DLY+KCG
Sbjct: 186 EMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCG 245
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+E A LF+ + KDV+SWN +IGG ++ LF+ M+R G P+ T+ S+L
Sbjct: 246 EVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLP 305
Query: 241 --ASVGGIELMKISQIHDLIIKL--GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT 296
A +G I++ + IH I K G+ +++ L SLID+YAK G I +A+Q++ SML
Sbjct: 306 ACAHLGAIDIGR--WIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHK 363
Query: 297 DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI--DDVILCLMLNICANVASLNLGR 354
+ S A+I GFA + +FDLF M +K+GI DD+ +L+ C++ L+LGR
Sbjct: 364 SLSSWNAMIFGFAM-HGRADASFDLFSRM--RKIGIEPDDITFVGLLSACSHSGMLDLGR 420
Query: 355 QI-HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAK 412
I + Y+ + +ID+ SG +A + M + + + W SL+
Sbjct: 421 HIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKM 480
Query: 413 HGYGHEAIELYKKM-KHEGMVPNDVTFLSLLFA 444
HG A + + K E P+ LS ++A
Sbjct: 481 HGNVELAESFAQNLIKIEPENPSSYILLSNIYA 513
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 159/309 (51%), Gaps = 19/309 (6%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+TG K+AL+ + + D STY+++L C + +H+ + +G++SNL
Sbjct: 173 ETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLK 232
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ +I Y+K G+V +A F + ++V+SW +I GY + ALL+F MLRSG
Sbjct: 233 IVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG 292
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKG-RFVENL-FVKSALLDLYAKCGWIED 184
N T S L ACA + + GR I I K + V N ++++L+D+YAKCG IE
Sbjct: 293 ETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEA 352
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA--- 241
A +F + K + SWNAMI G AM G D SF LF M + G++PD T +L A
Sbjct: 353 AHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSH 412
Query: 242 ----SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKT 296
+G ++Q + + KL + G +ID+ G + A ++ +M ++
Sbjct: 413 SGMLDLGRHIFRSMTQDYKMTPKL------EHYGCMIDLLGHSGLFKEAEEMINTMEMEP 466
Query: 297 D-IISCTAL 304
D +I C+ L
Sbjct: 467 DGVIWCSLL 475
>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Brachypodium distachyon]
Length = 849
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 188/563 (33%), Positives = 303/563 (53%), Gaps = 10/563 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D +T +++L C +H + +G+++ +S ++ YAK G++ A AF
Sbjct: 164 DEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAF 223
Query: 89 DRMPE---RNVVSWTAMISGYAQNGYDENA--LLVFSAMLRSGVRANQFTYSSALRACAR 143
P RNVVSW M+ GYA+NG A LL M GV A++ T S L C+
Sbjct: 224 LEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSG 283
Query: 144 MRWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
+ L R + +++G + V +AL+ Y +CG + A +F+ I K V SWNA
Sbjct: 284 LPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNA 343
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQ-GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKL 261
+IG A G + LFR M G KPD F++GS+L A L+ H I++
Sbjct: 344 LIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRN 403
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDL 321
GLE + + SL+ VY + G A L+ ++ + D +S +I+G++++ E+ L
Sbjct: 404 GLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQN-GLPGESLQL 462
Query: 322 FKDMILKKMGIDDVILCLM--LNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMY 379
F++M KK G +L L C+ + ++ LG+++H FA K D+ + +++IDMY
Sbjct: 463 FREMQSKKGGHWPSLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMY 522
Query: 380 AKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFL 439
+K G + DA FD + K+ +SWT +I GYA +G G EA+ LY KM EGM P+ T+L
Sbjct: 523 SKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYL 582
Query: 440 SLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
LL AC H G+ +G F +M N +I + EH++CV+ + +R G+ A ++ M
Sbjct: 583 GLLMACGHAGMLEDGLCFFQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVMPE 642
Query: 500 KPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKT 559
+P A + S++L AC ++G LG+ A L ++EP K+ +YV+ SN+Y + WD RK
Sbjct: 643 EPDAKILSSVLSACHMHGEVELGKKVADKLLELEPHKAEHYVLASNMYAGSRQWDEMRKV 702
Query: 560 RKLMEERSLRKNPGYSFLQSSKK 582
RK++ + + K PG S++ + K
Sbjct: 703 RKMLRDAGVAKEPGCSWIDIAGK 725
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 136/508 (26%), Positives = 242/508 (47%), Gaps = 32/508 (6%)
Query: 47 RQAHLIHAHI-ITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISG 105
RQ H + A + + +G + + ++ Y + G V A K F+ M RN+VSW A+++
Sbjct: 83 RQVHAVAAKLGLADG---DPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAA 139
Query: 106 YAQNGYDENALLVFSAMLR--SGVRA-NQFTYSSALRACARMRWLQGGRMIQGSIQKGRF 162
A L +F L G A ++ T + L CA + W + GR + G K +
Sbjct: 140 VAD---PRRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGW 196
Query: 163 VENLFVKSALLDLYAKCGWIEDAWILFERIER---KDVVSWNAMIGGLAMQGFNDDSFWL 219
V + L+D+YAKCG + DA F ++VVSWN M+GG A G +F L
Sbjct: 197 DAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGL 256
Query: 220 FRSMM--RQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE-SSNKLTGSLIDV 276
R M +G+ D T+ S+L G EL K+ ++H +++ GL + + + +LI
Sbjct: 257 LREMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAA 316
Query: 277 YAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI-LKKMGIDDV 335
Y + G + A +++ + + S ALI A++ S A +LF++M D
Sbjct: 317 YGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASA-AIELFREMTNACGQKPDWF 375
Query: 336 ILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEM 395
+ +L C N+ L G+ H F + D+ + +L+ +Y + G + A FD +
Sbjct: 376 SIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAV 435
Query: 396 GDKNVISWTSLIAGYAKHGYGHEAIELYKKM--KHEGMVPNDVTFLSLLFACSHTGLTCE 453
+K+ +SW ++IAGY+++G E+++L+++M K G P+ + S L ACS
Sbjct: 436 EEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRL 495
Query: 454 GWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGAC 513
G E+ + K + + S ++D++++ G ++ A ++ K S W+ ++
Sbjct: 496 GKEMHCFAL-KADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVS-WTVMITGY 553
Query: 514 SIYGNTSLGELAARNLFD------MEPE 535
++ G A L+D MEP+
Sbjct: 554 AVNGRGK----EAVGLYDKMGREGMEPD 577
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 186/368 (50%), Gaps = 25/368 (6%)
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRS--GVRANQFTYSSALRACARMRWLQGGRM 152
++ W +++ ++ G +AL + +L + GV ++FT AL++C GR
Sbjct: 29 SLPQWNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRG----DDGRQ 84
Query: 153 IQGSIQK-GRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA--M 209
+ K G + FV ++L+ +Y +CG ++DA +FE + +++VSWNA++ +A
Sbjct: 85 VHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVADPR 144
Query: 210 QGFNDDSFWLFRSMMRQ---GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
+G LFR + PD TL ++L +H L +K G +++
Sbjct: 145 RGLE-----LFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAA 199
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLK---TDIISCTALISGFARDDNHSKEAFDLFK 323
+++ L+D+YAK G + A + +++S ++ G+AR + + AF L +
Sbjct: 200 PRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYAR-NGEAGAAFGLLR 258
Query: 324 DMILKKMGI--DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDA-AVGNALIDMYA 380
+M +++ G+ D++ + +L +C+ + L R++HAF + V NALI Y
Sbjct: 259 EMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYG 318
Query: 381 KSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE-GMVPNDVTFL 439
+ G + A R FD + K V SW +LI +A++G AIEL+++M + G P+ +
Sbjct: 319 RCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIG 378
Query: 440 SLLFACSH 447
SLL AC +
Sbjct: 379 SLLLACGN 386
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 18/147 (12%)
Query: 353 GRQIHAFAFKYQ-SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
GRQ+HA A K + D VGN+L+ MY + G + DA + F+ M +N++SW +L+A A
Sbjct: 82 GRQVHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVA 141
Query: 412 KHGYGHEAIELYKKMKHE---GMVPNDVTFLSLLFACS-----HTGLTCEGWELFTDMIN 463
G +EL++ + P++ T +++L C+ TG G + +
Sbjct: 142 DPRRG---LELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSG--- 195
Query: 464 KYRILPRAEHFSCVVDLFARRGQLESA 490
+ PR + +VD++A+ G++ A
Sbjct: 196 -WDAAPRVSNV--LVDMYAKCGEMADA 219
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 187/587 (31%), Positives = 317/587 (54%), Gaps = 42/587 (7%)
Query: 27 LLDPSTYMSLLQFC--IDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYA--KVGDVL 82
L++P ++SLL+ C I + + Q+ ++ +I +G+ S +++I F A + D+
Sbjct: 5 LINP--FLSLLEKCKSISQLKQIQSQMVLTGLIEDGFAS-----SRLIAFCAISEWRDLD 57
Query: 83 SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLR-SGVRANQFTYSSALRAC 141
N SW I G+ + A++++ +L+ G + + +TY +AC
Sbjct: 58 YCTNILFNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKAC 117
Query: 142 ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN 201
AR+ ++ G I G + F ++FV +A++ L CG ++ A +F++ +D+VSWN
Sbjct: 118 ARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWN 177
Query: 202 AMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKL 261
+MI G +G+ ++ +R M +G+KPD T+ ++ + +L + H I +
Sbjct: 178 SMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEEN 237
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDD--------- 312
GL+ + L +L+D+Y K G++ SA +L+ SM ++S T ++ G+A+
Sbjct: 238 GLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLF 297
Query: 313 ---------------------NHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
N KEA LF +M + D+V + L+ C+ + +L+
Sbjct: 298 DEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALD 357
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
+G IH + K++ S + A+G ALIDMYAK G+I A + F E+ +N ++WT++I+G A
Sbjct: 358 VGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLA 417
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
HG H AI + +M ++P++VTFL LL AC H GL EG + F+ M +K+ + P+
Sbjct: 418 LHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKL 477
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
+H+SC+VDL R G LE A +I+ M I+ A +W A+ AC I+GN +GE AA L
Sbjct: 478 KHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQ 537
Query: 532 MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
M+P S YV+L+N+Y A W A K RKLM +R + K PG S ++
Sbjct: 538 MDPHDSGIYVLLANMYGEAEMWKEAGKARKLMRQRGVEKTPGCSSIE 584
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 198/432 (45%), Gaps = 38/432 (8%)
Query: 18 KFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAK 77
K L C T D TY L + C R I H++ G++S++ +S VI
Sbjct: 95 KRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVS 154
Query: 78 VGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSA 137
GD+ ARK FD+ R++VSW +MI+GY + G+ AL + M G++ ++ T
Sbjct: 155 CGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGV 214
Query: 138 LRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIED------------- 184
+ +CA++ L GR I++ + + +AL+D+Y KCG +E
Sbjct: 215 VSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTM 274
Query: 185 ------------------AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ 226
AW LF+ + KDVV WNAMIGG ++ LF M
Sbjct: 275 VSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAM 334
Query: 227 GMKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIR 284
+ PD T+ S L A +G +++ IH I K L + L +LID+YAK G I
Sbjct: 335 NINPDEVTMVSCLSACSQLGALDVG--IWIHHYIEKHELSLNVALGTALIDMYAKCGKIT 392
Query: 285 SAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNIC 344
A Q+++ + + ++ TA+ISG A N + A F +MI + D+V +L+ C
Sbjct: 393 KAIQVFQELPGRNSLTWTAIISGLALHGN-AHGAIAYFSEMIDNSVMPDEVTFLGLLSAC 451
Query: 345 ANVASLNLGRQIHA-FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVIS 402
+ + GR+ + + K+ S + ++D+ ++G + +A M + + +
Sbjct: 452 CHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVV 511
Query: 403 WTSLIAGYAKHG 414
W +L HG
Sbjct: 512 WGALFFACRIHG 523
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 182/577 (31%), Positives = 302/577 (52%), Gaps = 40/577 (6%)
Query: 44 KAERQAHLIHAHIITNGYESNLHLSTKVII-FYAKVGDVLSARKAFDRMPERNVVSWTAM 102
K++ QA +HA I +S H S ++I Y + + A F + V++W ++
Sbjct: 19 KSKSQAKQLHAQFIRT--QSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSV 76
Query: 103 ISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRF 162
I + AL F M SG + + S L++C M L+ G + G I +
Sbjct: 77 IRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGM 136
Query: 163 VENLFVKSALLDLYAK---------------------------------CGW---IEDAW 186
+L+ +AL+++YAK C I+
Sbjct: 137 DCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVR 196
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+FE + RKDVVS+N +I G A G +D+ + R M +KPD FTL S+L +
Sbjct: 197 RVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYV 256
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
+++K +IH +I+ G++S + SL+D+YAK I + +++ + D IS +L++
Sbjct: 257 DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVA 316
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
G+ ++ ++ EA LF+ M+ K+ V ++ CA++A+L+LG+Q+H + +
Sbjct: 317 GYVQNGRYN-EALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFG 375
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
+ + +AL+DMY+K G I A + FD M + +SWT++I G+A HG+GHEA+ L+++M
Sbjct: 376 SNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEM 435
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
K +G+ PN V F+++L ACSH GL E W F M Y + EH++ V DL R G+
Sbjct: 436 KRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGK 495
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
LE AYN I +M ++PT S+WS +L +CS++ N L E A +F ++ E YV++ N+
Sbjct: 496 LEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNM 555
Query: 547 YTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKN 583
Y + G W K R M ++ LRK P S+++ K
Sbjct: 556 YASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKT 592
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 151/295 (51%), Gaps = 3/295 (1%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITN 59
I+ ++G + AL+ T L P ++ S+L + + IH ++I
Sbjct: 212 TIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRK 271
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G +S++++ + ++ YAK + + + F R+ R+ +SW ++++GY QNG AL +F
Sbjct: 272 GIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLF 331
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
M+ + V+ +SS + ACA + L G+ + G + +G F N+F+ SAL+D+Y+KC
Sbjct: 332 RQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKC 391
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G I+ A +F+R+ D VSW A+I G A+ G ++ LF M RQG+KP+ ++L
Sbjct: 392 GNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVL 451
Query: 240 RA-SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
A S G+ + + GL + ++ D+ + G + AY M
Sbjct: 452 TACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKM 506
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 186/536 (34%), Positives = 297/536 (55%), Gaps = 10/536 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IH G++ N+ ++ +I Y++ G AR FD MP R++ SW AMISG QNG
Sbjct: 237 IHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGN 296
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
AL V M G++ N T S L C ++ + +I + K +LFV +A
Sbjct: 297 AAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNA 356
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD---SFWLFRSMMRQGM 228
L+++YAK G +EDA F+++ DVVSWN++I NDD + F M G
Sbjct: 357 LINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQ---NDDPVTAHGFFVKMQLNGF 413
Query: 229 KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG-SLIDVYAKYGSIRSAY 287
+PD TL S+ + +H I++ G + + G +++D+YAK G + SA+
Sbjct: 414 QPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAH 473
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI-LKKMGIDDVILCLMLNICAN 346
+++ +L D+IS LI+G+A++ + EA +++K M K++ + +L A+
Sbjct: 474 KVFEIILVKDVISWNTLITGYAQN-GLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAH 532
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
V +L G +IH K D V LID+Y K G + DA F ++ ++ ++W ++
Sbjct: 533 VGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAI 592
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYR 466
I+ + HG+ + ++L+ +M EG+ P+ VTF+SLL ACSH+G EG F ++ +Y
Sbjct: 593 ISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFR-LMQEYG 651
Query: 467 ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAA 526
I P +H+ C+VDL R G LE AY I+ M ++P AS+W A+LGAC I+GN LG+ A+
Sbjct: 652 IKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFAS 711
Query: 527 RNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
LF+++ + YV+LSNIY G W+ K R L ER L+K PG+S ++ ++K
Sbjct: 712 DRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRK 767
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 157/531 (29%), Positives = 286/531 (53%), Gaps = 18/531 (3%)
Query: 49 AHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQ 108
A +HA ++ G ++ +ST+++ YA +GDV +R FD++P+++V +W +MIS Y
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVH 194
Query: 109 NGYDENALLVF-SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLF 167
NG+ A+ F +L S +R + +T+ L+AC L GR I K F N+F
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGT---LVDGRRIHCWAFKLGFQWNVF 251
Query: 168 VKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
V ++L+ +Y++ G+ A LF+ + +D+ SWNAMI GL G + + M +G
Sbjct: 252 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 311
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
+K + T+ SIL ++ IH +IK GLE ++ +LI++YAK+G++ A
Sbjct: 312 IKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDAR 371
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
+ ++ M TD++S ++I+ + ++D+ A F M L D + L + +I A
Sbjct: 372 KAFQQMFITDVVSWNSIIAAYEQNDD-PVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQS 430
Query: 348 ASLNLGRQIHAFAFKYQ-SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
R +H F + D +GNA++DMYAK G + A++ F+ + K+VISW +L
Sbjct: 431 RDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTL 490
Query: 407 IAGYAKHGYGHEAIELYKKMKH-EGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
I GYA++G EAIE+YK M+ + ++PN T++S+L A +H G +G + +I K
Sbjct: 491 ITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVI-KT 549
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTS----- 520
+ +C++D++ + G+L A ++ Q+ + ++ W+AI+ I+G+
Sbjct: 550 NLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVP-QESSVTWNAIISCHGIHGHAEKTLKL 608
Query: 521 LGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKN 571
GE+ + +P+ V +V L + + +G + + +LM+E ++ +
Sbjct: 609 FGEMLDEGV---KPDH-VTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPS 655
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 187/386 (48%), Gaps = 4/386 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T +S+L C A LIH ++I +G E +L +S +I YAK G++ ARKAF +M
Sbjct: 318 TVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQM 377
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
+VVSW ++I+ Y QN A F M +G + + T S A+ R + R
Sbjct: 378 FITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSR 437
Query: 152 MIQGSI-QKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ G I ++G +E++ + +A++D+YAK G ++ A +FE I KDV+SWN +I G A
Sbjct: 438 SVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQN 497
Query: 211 GFNDDSFWLFRSMMR-QGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
G ++ +++ M + + P+ T SIL A L + +IH +IK L +
Sbjct: 498 GLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFV 557
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
LIDVY K G + A L+ + + ++ A+IS H+++ LF +M+ +
Sbjct: 558 ATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGI-HGHAEKTLKLFGEMLDEG 616
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ D V +L+ C++ + G+ +Y ++D+ ++G + A
Sbjct: 617 VKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAY 676
Query: 390 RAFDEMG-DKNVISWTSLIAGYAKHG 414
+M + W +L+ HG
Sbjct: 677 GFIKDMPLQPDASIWGALLGACRIHG 702
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 1/198 (0%)
Query: 15 QALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIF 74
+ K C + + + T++S+L A +Q IH +I ++ ++T +I
Sbjct: 505 EVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDV 564
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
Y K G ++ A F ++P+ + V+W A+IS + +G+ E L +F ML GV+ + T+
Sbjct: 565 YGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTF 624
Query: 135 SSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE- 193
S L AC+ +++ G+ +Q+ +L ++DL + G++E A+ + +
Sbjct: 625 VSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPL 684
Query: 194 RKDVVSWNAMIGGLAMQG 211
+ D W A++G + G
Sbjct: 685 QPDASIWGALLGACRIHG 702
>gi|224063136|ref|XP_002301008.1| predicted protein [Populus trichocarpa]
gi|222842734|gb|EEE80281.1| predicted protein [Populus trichocarpa]
Length = 691
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 172/512 (33%), Positives = 285/512 (55%), Gaps = 9/512 (1%)
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
Y K G V A F++MP+RNVVSW +I+G A+NG AL M R G++ ++FT+
Sbjct: 182 YFKEGLVEEAVNLFNQMPDRNVVSWNTIIAGLAENG-SSRALQFVCKMHREGIKLDKFTF 240
Query: 135 SSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER 194
AL+ C+ +L G+ I + K + F SAL+D+Y+ C ++DA LF++
Sbjct: 241 PCALKTCSYAGFLVAGKQIHCYVLKSGLESSCFAVSALVDMYSNCNGLDDAIRLFDQYSG 300
Query: 195 ------KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIEL 248
+V WN+M+ G + N + + + G D +TL S L+ + + +
Sbjct: 301 GTGSICDSLVLWNSMLSGYVVHEKNRAAVNMIAQIHHSGASVDSYTLSSALKVCINLLNV 360
Query: 249 MKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGF 308
Q+H LI+ G E + L+D+YAK G+++ A++L+ + K DI++ + L+ G
Sbjct: 361 RLGIQVHALIVTSGHELDYVVGSILVDLYAKLGNMKDAFKLFHRLPKKDIVAWSGLLMGC 420
Query: 309 ARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYD 368
A+ + +S A LF+DM+ + +D I+ +L +C+++AS+ G+Q+HAF K +
Sbjct: 421 AKMELNSL-ALSLFRDMVTFGVEVDQYIVSNVLKVCSSLASIGTGKQVHAFCIKRGYETE 479
Query: 369 AAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKH 428
ALIDMY+K GE+ D F + D++V+ WT +I G A++G +EA+E++++M
Sbjct: 480 QVTITALIDMYSKCGEVEDGLVLFGCVADRDVVCWTGIIVGCAQNGRANEALEIFRQMVQ 539
Query: 429 EGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLE 488
G+ PN+VT+L +L AC H GL E +F M +R+ P+ EH+ C+VDL + G +
Sbjct: 540 SGLKPNEVTYLGVLTACRHAGLVVEAQTIFGTMKCDHRLEPQLEHYYCMVDLLCQAGYFK 599
Query: 489 SAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYT 548
+I +M KP ++WS++LGAC + NT L A NL P YV+LSN Y
Sbjct: 600 EVEKLIAEMPFKPDKTIWSSMLGACGTHRNTGLVSTIAENLLANCPNDPSIYVMLSNAYG 659
Query: 549 AAGAWDNARKTRKLMEERSLRKNPGYSFLQSS 580
G WD+ + R+ ++ + K G S+++ S
Sbjct: 660 TLGMWDSLSQVREAAKKLGV-KAAGTSWIEIS 690
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 160/621 (25%), Positives = 274/621 (44%), Gaps = 85/621 (13%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D ++ ++ C KA +Q H+H+I GY N++++ ++ YA ++ A K
Sbjct: 1 MDLKHIVAAIRHCGRVKALKQGKSFHSHLIKTGYSHNVYIACNLVSMYADFTFLIDAYKL 60
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA-NQFTYSSALRACARMRW 146
FD MP +N+V+WT M+S Y NG A+ +++ ML S N F YS L+AC +
Sbjct: 61 FDEMPVKNIVTWTTMVSAYTSNGKPREAIKLYTRMLDSKSEVPNGFMYSVVLKACGLVGE 120
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI-------------- 192
++ GR+I + ++ + +ALLD+Y KCG + DA +F+RI
Sbjct: 121 IELGRLIHKRFSRENLDYDIVLLNALLDMYVKCGCLSDARKVFDRIFLRANSTSWNTMIS 180
Query: 193 ------------------ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFT 234
++VVSWN +I GLA G + + M R+G+K D FT
Sbjct: 181 GYFKEGLVEEAVNLFNQMPDRNVVSWNTIIAGLAENG-SSRALQFVCKMHREGIKLDKFT 239
Query: 235 LGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML 294
L+ L+ QIH ++K GLESS +L+D+Y+ + A +L+
Sbjct: 240 FPCALKTCSYAGFLVAGKQIHCYVLKSGLESSCFAVSALVDMYSNCNGLDDAIRLFDQYS 299
Query: 295 KTDIISCTALI------SGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
C +L+ SG+ + + + A ++ + +D L L +C N+
Sbjct: 300 GGTGSICDSLVLWNSMLSGYVVHEKN-RAAVNMIAQIHHSGASVDSYTLSSALKVCINLL 358
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA 408
++ LG Q+HA D VG+ L+D+YAK G + DA + F + K++++W+ L+
Sbjct: 359 NVRLGIQVHALIVTSGHELDYVVGSILVDLYAKLGNMKDAFKLFHRLPKKDIVAWSGLLM 418
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS-----------HTGLTCEGWE- 456
G AK A+ L++ M G+ + ++L CS H G+E
Sbjct: 419 GCAKMELNSLALSLFRDMVTFGVEVDQYIVSNVLKVCSSLASIGTGKQVHAFCIKRGYET 478
Query: 457 ---LFTDMINKYRILPRAEH----FSCVVDL-----------FARRGQLESAYNMIRQM- 497
T +I+ Y E F CV D A+ G+ A + RQM
Sbjct: 479 EQVTITALIDMYSKCGEVEDGLVLFGCVADRDVVCWTGIIVGCAQNGRANEALEIFRQMV 538
Query: 498 --NIKPTASLWSAILGACS-----IYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAA 550
+KP + +L AC + T G + + +EP+ +Y + ++ A
Sbjct: 539 QSGLKPNEVTYLGVLTACRHAGLVVEAQTIFGTMKCDH--RLEPQLE-HYYCMVDLLCQA 595
Query: 551 GAWDNARKTRKLMEERSLRKN 571
G + ++ KL+ E + +
Sbjct: 596 GYF---KEVEKLIAEMPFKPD 613
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 188/397 (47%), Gaps = 15/397 (3%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD T+ L+ C IH +++ +G ES+ + ++ Y+ + A +
Sbjct: 235 LDKFTFPCALKTCSYAGFLVAGKQIHCYVLKSGLESSCFAVSALVDMYSNCNGLDDAIRL 294
Query: 88 FDRMPE------RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC 141
FD+ ++V W +M+SGY + + A+ + + + SG + +T SSAL+ C
Sbjct: 295 FDQYSGGTGSICDSLVLWNSMLSGYVVHEKNRAAVNMIAQIHHSGASVDSYTLSSALKVC 354
Query: 142 ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN 201
+ ++ G + I + V S L+DLYAK G ++DA+ LF R+ +KD+V+W+
Sbjct: 355 INLLNVRLGIQVHALIVTSGHELDYVVGSILVDLYAKLGNMKDAFKLFHRLPKKDIVAWS 414
Query: 202 AMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKL 261
++ G A N + LFR M+ G++ D + + ++L+ + Q+H IK
Sbjct: 415 GLLMGCAKMELNSLALSLFRDMVTFGVEVDQYIVSNVLKVCSSLASIGTGKQVHAFCIKR 474
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDL 321
G E+ +LID+Y+K G + L+ + D++ T +I G A+ + + EA ++
Sbjct: 475 GYETEQVTITALIDMYSKCGEVEDGLVLFGCVADRDVVCWTGIIVGCAQ-NGRANEALEI 533
Query: 322 FKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN--ALIDMY 379
F+ M+ + ++V +L C + A L + Q K + + + ++D+
Sbjct: 534 FRQMVQSGLKPNEVTYLGVLTACRH-AGLVVEAQTIFGTMKCDHRLEPQLEHYYCMVDLL 592
Query: 380 AKSGEIADANRAFDEM---GDKNVISWTSLIAGYAKH 413
++G + + EM DK + W+S++ H
Sbjct: 593 CQAGYFKEVEKLIAEMPFKPDKTI--WSSMLGACGTH 627
>gi|449443954|ref|XP_004139740.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 1441
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 195/590 (33%), Positives = 317/590 (53%), Gaps = 16/590 (2%)
Query: 2 NIVRANFKTGQLKQALKFSLSC-------PDTLLDPSTYMSLLQFCIDKKAERQAHLIHA 54
N + F L Q + SC PD T+ S+ C +H
Sbjct: 379 NAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEF----TFTSIFSACASLHYLNFGGQLHT 434
Query: 55 HIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDEN 114
+I N + SNL ++ ++ YAK G + ARK F+ M + VSW A+I GY Q Y++
Sbjct: 435 VMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDE 494
Query: 115 ALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLD 174
A +F M+ +GV ++ + +S + ACA ++ L+ G+ + K + S+L+D
Sbjct: 495 AFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLID 554
Query: 175 LYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFT 234
+Y KCG + A +F + ++VVS NA+I G M G +++ LF+ + G+KP T
Sbjct: 555 MYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTM-GHLEEAIHLFQEIQMVGLKPTEVT 613
Query: 235 LGSILRASVGGIELMKISQIHDLIIKLG-LESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+L G L QIH ++K G L SS + SL+ +Y + L+ +
Sbjct: 614 FAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSEL 673
Query: 294 -LKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNL 352
++ TALISG+A+ ++H K A ++ M + D +L CA ++SL
Sbjct: 674 QYPKGLVVWTALISGYAQQNHHEK-ALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQN 732
Query: 353 GRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN-VISWTSLIAGYA 411
G++IH+ F + D ++LIDMYAK G++ + + F EM +N VISW S+I G A
Sbjct: 733 GQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLA 792
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
K+GY EA+E++K+M+ + ++P++VTFL +L ACSH G EG ++F M+N Y++LPR
Sbjct: 793 KNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLLPRV 852
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
+H C+VD+ R G L A I ++ K LWS +LGAC +G+ G+ AA L +
Sbjct: 853 DHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAADKLME 912
Query: 532 MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSK 581
++P+ S +YV+LS+IY + W A R+ M+ + ++K PGYS+++ +
Sbjct: 913 LKPQSSSSYVLLSSIYAESENWSGAVSLRREMKLKGVKKLPGYSWIEPGR 962
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 179/572 (31%), Positives = 297/572 (51%), Gaps = 52/572 (9%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDP--STYMSLLQFCIDKKAERQAHLIHAHIITNG 60
++ + K G ++A+ F L T L S+ S+L ++HA G
Sbjct: 280 MISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEG 339
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+ N+++ + ++ YAK + +A++ F+ + ERN+V W AM+ G+AQNG + + FS
Sbjct: 340 LDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFS 399
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M R G + ++FT++S ACA + +L G + + K +F NLFV +AL+D+YAK G
Sbjct: 400 CMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSG 459
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+++A FE ++ D VSWNA+I G + +ND++F++FR M+ G+ PD +L SI+
Sbjct: 460 ALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVS 519
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
A EL + Q H L++K+GL++S SLID+Y K G + +A ++ SM +++S
Sbjct: 520 ACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVS 579
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
ALI+G+ H +EA LF+++ + + +V +L+ C LNLGRQIH
Sbjct: 580 VNALIAGYTM--GHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQV 637
Query: 361 FKYQS-SYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHGYGHE 418
K+ S V +L+ +Y S D+ F E+ K ++ WT+LI+GYA+ + +
Sbjct: 638 MKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEK 697
Query: 419 AIELYKKMKHEGMVPNDVTFLSLLFACS----------------HTG-----LTCEGWEL 457
A++ Y+ M+ + ++P+ F S+L AC+ HTG +TC
Sbjct: 698 ALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSS--- 754
Query: 458 FTDMINK----------YRILPRAEHF----SCVVDLFARRGQLESAYNMIRQM---NIK 500
DM K +R +PR + S +V L A+ G E A + +QM +I
Sbjct: 755 LIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGL-AKNGYAEEALEIFKQMEQQSII 813
Query: 501 PTASLWSAILGACSIYGNTSLGELAARNLFDM 532
P + +L ACS G S G R +FD+
Sbjct: 814 PDEVTFLGVLSACSHAGRVSEG----RKVFDL 841
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 148/479 (30%), Positives = 245/479 (51%), Gaps = 37/479 (7%)
Query: 71 VIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
V+ Y +G + ARK F ++P NVV+W MISG+A+ G+ E A+ F + ++G++A
Sbjct: 249 VVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKAT 308
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE 190
+ + S L A A + L G M+ K +N++V SAL+++YAKC ++ A +F
Sbjct: 309 RSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFN 368
Query: 191 RIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMK 250
+ +++V WNAM+GG A G + F M R G +PD FT SI A L
Sbjct: 369 SLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNF 428
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR 310
Q+H ++IK S+ + +L+D+YAK G+++ A + + M D +S A+I G+ +
Sbjct: 429 GGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQ 488
Query: 311 DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA 370
++ ++ EAF +F+ M+ + D+V L +++ CANV L G+Q H K
Sbjct: 489 EE-YNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTC 547
Query: 371 VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG 430
G++LIDMY K G + A F M +NV+S +LIAGY G+ EAI L+++++ G
Sbjct: 548 AGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTM-GHLEEAIHLFQEIQMVG 606
Query: 431 MVPNDVTFLSLLFACS-----------HTGLTCEGWELFTDMI---------NKYRILPR 470
+ P +VTF LL C H + G+ ++M+ N R +
Sbjct: 607 LKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDS 666
Query: 471 AEHFS------------CVVDLFARRGQLESA---YNMIRQMNIKPTASLWSAILGACS 514
FS ++ +A++ E A Y +R NI P + ++++L AC+
Sbjct: 667 ETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACA 725
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 132/469 (28%), Positives = 229/469 (48%), Gaps = 42/469 (8%)
Query: 44 KAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMI 103
+A A +IH+ + G L ++ Y K G+V A+KAF R+ +++V +W +++
Sbjct: 55 QALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVL 114
Query: 104 SGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFV 163
S Y +G + F M VR N+FT++ L AC+ ++ + GR + + K F
Sbjct: 115 SMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFG 174
Query: 164 ENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM 223
F + L+D+YAKC ++ DA ++F+ D VSW A+I G GF ++ +F M
Sbjct: 175 FRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRM 234
Query: 224 MRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
R G PD TL +++ A Y G +
Sbjct: 235 QRVGHAPDQITLVTVVNA-----------------------------------YVALGRL 259
Query: 284 RSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCL--ML 341
A +L+ + ++++ +ISG A+ ++EA F + LKK G+ L +L
Sbjct: 260 ADARKLFTQIPNPNVVAWNVMISGHAK-RGFAEEAISFFLE--LKKTGLKATRSSLGSVL 316
Query: 342 NICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVI 401
+ A+++ LN G +HA A K + VG+AL++MYAK ++ A + F+ +G++N++
Sbjct: 317 SAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIV 376
Query: 402 SWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM 461
W +++ G+A++G E +E + MK G P++ TF S+ AC+ G +L T M
Sbjct: 377 LWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVM 436
Query: 462 INKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
I K + + +VD++A+ G L+ A M I S W+AI+
Sbjct: 437 I-KNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVS-WNAII 483
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 125/480 (26%), Positives = 227/480 (47%), Gaps = 37/480 (7%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ +L C + +H + G+ +I YAK + AR FD
Sbjct: 144 TFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGA 203
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
+ VSWTA+I+GY ++G+ A+ VF M R G +Q T + + A
Sbjct: 204 LNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNA----------- 252
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
Y G + DA LF +I +VV+WN MI G A +G
Sbjct: 253 ------------------------YVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRG 288
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
F +++ F + + G+K +LGS+L A L S +H K GL+ + +
Sbjct: 289 FAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGS 348
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
+L+++YAK + +A Q++ S+ + +I+ A++ GFA+ + ++E + F M
Sbjct: 349 ALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQ-NGLAQEVMEFFSCMKRHGPQ 407
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
D+ + + CA++ LN G Q+H K + + + V NAL+DMYAKSG + +A +
Sbjct: 408 PDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQ 467
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLT 451
F+ M + +SW ++I GY + Y EA ++++M G++P++V+ S++ AC++
Sbjct: 468 FELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQEL 527
Query: 452 CEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
G + ++ K + S ++D++ + G + +A ++ M + S+ + I G
Sbjct: 528 KRGQQCHCLLV-KVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAG 586
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 193/595 (32%), Positives = 314/595 (52%), Gaps = 34/595 (5%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPSTYMS-----LLQFCID-KKAERQAHLIHAHI 56
I + + TG++ AL F +L+ PSTY+S L C A+ HL
Sbjct: 20 IAQRDLITGKILHALYFK-----SLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLTQY-- 72
Query: 57 ITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENAL 116
N+ +I YAK + AR+ FD +P+ ++VS+ +I+ YA G L
Sbjct: 73 ------PNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTL 126
Query: 117 LVFSAMLRSGVRANQFTYSSALRACAR----MRWLQGGRMIQGSIQKGRFVENLFVKSAL 172
+F + + + FT S + AC +R L ++ G V +A+
Sbjct: 127 RLFEEVRELRLGLDGFTLSGVITACGDDVGLVRQLHCFVVVCGHDCYAS------VNNAV 180
Query: 173 LDLYAKCGWIEDAWILFERIER---KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
L Y++ G++ +A +F + +D VSWNAMI ++ LFR M+R+G+K
Sbjct: 181 LACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLK 240
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKY-GSIRSAYQ 288
D FT+ S+L A +L+ Q H ++IK G ++ + LID+Y+K GS+ +
Sbjct: 241 VDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRK 300
Query: 289 LYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
++ + D++ +ISGF+ ++ S++ F++M DD + + C+N++
Sbjct: 301 VFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLS 360
Query: 349 SLNLGRQIHAFAFKYQSSYD-AAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI 407
S +LG+Q+HA A K Y+ +V NAL+ MY+K G + DA R FD M + N +S S+I
Sbjct: 361 SPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMI 420
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRI 467
AGYA+HG E++ L++ M + + PN +TF+++L AC HTG EG + F M ++ I
Sbjct: 421 AGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCI 480
Query: 468 LPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAAR 527
P AEH+SC++DL R G+L+ A +I M P + W+ +LGAC +GN L AA
Sbjct: 481 EPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAAN 540
Query: 528 NLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+EP + YV+LSN+Y +A W+ A ++LM ER ++K PG S+++ KK
Sbjct: 541 EFLRLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKK 595
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN 399
+L C L G+ +HA FK + N +Y+K G + +A +F N
Sbjct: 15 LLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLTQYPN 74
Query: 400 VISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFT 459
V S+ +LI YAKH H A ++ ++ P+ V++ +L+ A + G LF
Sbjct: 75 VFSYNTLINAYAKHSLIHIARRVFDEIPQ----PDIVSYNTLIAAYADRGECGPTLRLFE 130
Query: 460 DM 461
++
Sbjct: 131 EV 132
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 196/580 (33%), Positives = 313/580 (53%), Gaps = 35/580 (6%)
Query: 19 FSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYA 76
FSL + L P T+ S+L+ C + + IH + G+ +++++ +I Y
Sbjct: 140 FSLFMLSSGLQPDYRTFPSVLKAC---RNVTDGNKIHCLALKFGFMWDVYVAASLIHLYC 196
Query: 77 KVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA-NQFTYS 135
+ G V++AR FD MP R++ SW AMISGY Q+G + AL L G+RA + T
Sbjct: 197 RYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEAL-----TLSDGLRAMDSVTVV 251
Query: 136 SALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERK 195
S L AC G I K LFV + L+DLYA+ G ++D +F+R+ +
Sbjct: 252 SLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVR 311
Query: 196 DVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI---------LRA--SVG 244
D++SWN++I + + LF+ M ++PDC TL S+ +RA SV
Sbjct: 312 DLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQ 371
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
G L K + D+ I +++ +YAK G + SA ++ + D+IS +
Sbjct: 372 GFTLRKGWFLEDITIG----------NAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTI 421
Query: 305 ISGFARDDNHSKEAFDLFKDMILK--KMGIDDVILCLMLNICANVASLNLGRQIHAFAFK 362
ISG+A++ + EA +++ M + ++ + +L C+ +L G ++H K
Sbjct: 422 ISGYAQN-GFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLK 480
Query: 363 YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIEL 422
D VG +L DMY K G + DA F ++ N + W +LIA + HG+G +A+ L
Sbjct: 481 NGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVML 540
Query: 423 YKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFA 482
+K+M EG+ P+ +TF++LL ACSH+GL EG F M Y I P +H+ C+VDL+
Sbjct: 541 FKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYG 600
Query: 483 RRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVV 542
R GQLE A N I+ M ++P AS+W A+L AC ++GN LG++A+ +LF++EPE +V+
Sbjct: 601 RAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVL 660
Query: 543 LSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
LSN+Y +AG W+ + R + + LRK PG+S ++ K
Sbjct: 661 LSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNK 700
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 151/537 (28%), Positives = 283/537 (52%), Gaps = 22/537 (4%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
+L ++C + ++ A +HA ++ + N+ +S K++ Y +G+V AR FD + R
Sbjct: 59 TLFRYCTNLQS---AKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNR 115
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSA-MLRSGVRANQFTYSSALRACARMRWLQGGRMI 153
+V +W MISGY + GY + FS ML SG++ + T+ S L+AC R + G I
Sbjct: 116 DVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKAC---RNVTDGNKI 172
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN 213
K F+ +++V ++L+ LY + G + +A ILF+ + +D+ SWNAMI G G
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNA 232
Query: 214 DDSFWLFRSMMRQGMKP-DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS 272
++ + G++ D T+ S+L A + + IH IK GLES ++
Sbjct: 233 KEAL-----TLSDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNK 287
Query: 273 LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI 332
LID+YA++GS++ +++ M D+IS ++I + ++ + A LF++M L ++
Sbjct: 288 LIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLR-AILLFQEMRLSRIQP 346
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAF-KYQSSYDAAVGNALIDMYAKSGEIADANRA 391
D + L + +I + + + R + F K D +GNA++ MYAK G + A
Sbjct: 347 DCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAV 406
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG--MVPNDVTFLSLLFACSHTG 449
F+ + +K+VISW ++I+GYA++G+ EAIE+Y M+ EG + N T++S+L ACS G
Sbjct: 407 FNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAG 466
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
+G +L ++ L S + D++ + G+L+ A ++ Q+ + + W+ +
Sbjct: 467 ALRQGMKLHGRLLKNGLYLDVFVGTS-LADMYGKCGRLDDALSLFYQIP-RVNSVPWNTL 524
Query: 510 LGACSIYGNTSLGELAARNLFD--MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
+ +G+ + + + D ++P+ + +V L + + +G D ++M+
Sbjct: 525 IACHGFHGHGEKAVMLFKEMLDEGVKPDH-ITFVTLLSACSHSGLVDEGEWCFEMMQ 580
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 190/551 (34%), Positives = 307/551 (55%), Gaps = 56/551 (10%)
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
Y K G++ +AR F++MPE++VVSW AM+SG+AQNG+ E A +F ML N+ ++
Sbjct: 132 YVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVK----NEISW 187
Query: 135 SSALRACARMRWLQGGR---------------------MIQGSIQKGRF--VENLFVKSA 171
+ L A ++Q GR ++ G ++K R +LF +
Sbjct: 188 NGLLSA-----YVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMP 242
Query: 172 LLDL---------YAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRS 222
+ D YA+ G + +A LFE + +DV +W AM+ G G D++ +F
Sbjct: 243 VRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEE 302
Query: 223 MMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGS 282
M + + + +++ V ++ K ++ D + S N +++ YA+ G+
Sbjct: 303 MPEK----NEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWN----TMVTGYAQCGN 354
Query: 283 IRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLN 342
I A L+ M + D IS A+ISG+A+ S+EA LF M ++ L L+
Sbjct: 355 IDQAKILFDEMPQRDCISWAAMISGYAQS-GQSEEALHLFIKMKRDGGILNRSALACALS 413
Query: 343 ICANVASLNLGRQIHAFAFK--YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNV 400
CA +A+L LG+Q+H K +Q+ Y A GNAL+ MY K G I +A F+++ +K++
Sbjct: 414 SCAEIAALELGKQLHGRLVKAGFQTGYIA--GNALLAMYGKCGSIEEAFDVFEDITEKDI 471
Query: 401 ISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTD 460
+SW ++IAGYA+HG+G EA+ L++ MK + P+DVT + +L ACSHTG +G E F
Sbjct: 472 VSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGFVDKGMEYFNS 530
Query: 461 MINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTS 520
M Y I A+H++C++DL R G+L+ A N+++ M P A+ W A+LGA I+G+T
Sbjct: 531 MYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTE 590
Query: 521 LGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ-S 579
LGE AA +F+MEP+ S YV+LSN+Y A+G W R+ R M ++ ++K PGYS+++
Sbjct: 591 LGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQ 650
Query: 580 SKKNILLLEPC 590
+K +I + C
Sbjct: 651 NKTHIFTVGDC 661
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 195/387 (50%), Gaps = 29/387 (7%)
Query: 71 VIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
+I YA+ G + AR+ F+ +P R+V +WTAM+SG+ QNG + A +F M N
Sbjct: 252 MITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEM----PEKN 307
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE 190
+ ++++ + + + ++ R + + N + ++ YA+CG I+ A ILF+
Sbjct: 308 EVSWNAMIAGYVQSQQIEKARELFDQMPS----RNTSSWNTMVTGYAQCGNIDQAKILFD 363
Query: 191 RIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIEL 248
+ ++D +SW AMI G A G ++++ LF M R G + L L A + +EL
Sbjct: 364 EMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALEL 423
Query: 249 MKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGF 308
K Q+H ++K G ++ +L+ +Y K GSI A+ ++ + + DI+S +I+G+
Sbjct: 424 GK--QLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGY 481
Query: 309 ARDDNHSKEAFDLFKDMILKKMGI--DDVILCLMLNICANVASLNLGRQIHAFAFK-YQS 365
AR KEA LF+ M KM I DDV L +L+ C++ ++ G + ++ Y
Sbjct: 482 AR-HGFGKEALALFESM---KMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGI 537
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHG---YGHEAIE 421
+ +A +ID+ ++G + +A M + +W +L+ HG G +A E
Sbjct: 538 TANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAE 597
Query: 422 LYKKMK--HEGMVPNDVTFLSLLFACS 446
+M+ + GM LS L+A S
Sbjct: 598 KVFEMEPDNSGM----YVLLSNLYAAS 620
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 113/474 (23%), Positives = 203/474 (42%), Gaps = 72/474 (15%)
Query: 82 LSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC 141
L ++ + + + ++V W IS Y + G E+AL VF+ M R TY++
Sbjct: 46 LESKNSDSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRST----VTYNA----- 96
Query: 142 ARMRWLQGGRMIQGSIQKGRF--VENLFVKSALLDL---------YAKCGWIEDAWILFE 190
MI G + +F +F K DL Y K G + A LF
Sbjct: 97 ----------MISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFN 146
Query: 191 RIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMK 250
++ KDVVSWNAM+ G A GF +++ +F M+ + + + +L A V +
Sbjct: 147 QMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVK----NEISWNGLLSAYVQNGRIED 202
Query: 251 ISQIHDLIIKLGLESSNKLTGS---------------------------LIDVYAKYGSI 283
++ D + + S N L G +I YA+ G +
Sbjct: 203 ARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLL 262
Query: 284 RSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNI 343
A +L+ + D+ + TA++SGF + + EA +F++M K ++V M+
Sbjct: 263 SEARRLFEELPIRDVFAWTAMVSGFVQ-NGMLDEATRIFEEMPEK----NEVSWNAMIAG 317
Query: 344 CANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISW 403
+ R++ F S + + N ++ YA+ G I A FDEM ++ ISW
Sbjct: 318 YVQSQQIEKAREL----FDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISW 373
Query: 404 TSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMIN 463
++I+GYA+ G EA+ L+ KMK +G + N L +C+ G +L ++
Sbjct: 374 AAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLV- 432
Query: 464 KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
K + ++ ++ + G +E A+++ + K S W+ ++ + +G
Sbjct: 433 KAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVS-WNTMIAGYARHG 485
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 98/207 (47%), Gaps = 5/207 (2%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
++GQ ++AL + +L+ S L C + A +H ++ G+++
Sbjct: 382 QSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYI 441
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
++ Y K G + A F+ + E+++VSW MI+GYA++G+ + AL +F +M +
Sbjct: 442 AGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMT 500
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSI-QKGRFVENLFVKSALLDLYAKCGWIEDA 185
++ + T L AC+ ++ G S+ Q N + ++DL + G +++A
Sbjct: 501 IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEA 560
Query: 186 WILFERIE-RKDVVSWNAMIGGLAMQG 211
L + + D +W A++G + G
Sbjct: 561 LNLMKSMPFYPDAATWGALLGASRIHG 587
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 134/295 (45%), Gaps = 55/295 (18%)
Query: 274 IDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGID 333
I Y + G SA ++ M + ++ A+ISG+ S FD + + +KM
Sbjct: 67 ISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYL-----SNNKFDCARK-VFEKMPDR 120
Query: 334 DVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFD 393
D+I N ++ Y K+G ++ A F+
Sbjct: 121 DLI----------------------------------SWNVMLSGYVKNGNLSAARALFN 146
Query: 394 EMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCE 453
+M +K+V+SW ++++G+A++G+ EA +++ +M +V N++++ LL A G +
Sbjct: 147 QMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIED 202
Query: 454 GWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGAC 513
LF ++ + I+ ++C++ + R+ +L+ A ++ +M ++ S W+ ++
Sbjct: 203 ARRLFDSKMD-WEIVS----WNCLMGGYVRKKRLDDARSLFDRMPVRDKIS-WNIMITGY 256
Query: 514 SIYGNTSLGELAARNLFDMEPEKSV-NYVVLSNIYTAAGAWDNARKTRKLMEERS 567
+ G S AR LF+ P + V + + + + G D A + + M E++
Sbjct: 257 AQNGLLS----EARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKN 307
>gi|125525521|gb|EAY73635.1| hypothetical protein OsI_01524 [Oryza sativa Indica Group]
Length = 560
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 281/522 (53%), Gaps = 17/522 (3%)
Query: 68 STKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV 127
+T I G V AR FD MPER+VV+WTAM+SGYA NG AL VF M+ +G
Sbjct: 6 ATTFISSLCSRGAVCHARALFDEMPERDVVAWTAMLSGYASNGLRREALDVFRRMVAAGA 65
Query: 128 RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENL-FVKSALLDLYAKCG-WIEDA 185
N++T SS L AC R M ++ R V+ + +V +AL+D YA + DA
Sbjct: 66 APNEYTLSSVLTAC-RGPCAPAMAMPLHAVAVRRGVDRMPYVVNALIDSYASLAEGVVDA 124
Query: 186 WILFERI-ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG 244
LF+ + + SW +MI G A G LF++M++ G++ F L A
Sbjct: 125 RRLFDALGSGRTAASWTSMIAGYARWGQERTGLRLFKTMLKDGVELSTFACSIALHACTL 184
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
I+L Q+H IK L+ + + SLID+Y I A L+ + ++I+ +
Sbjct: 185 VIDLCLGQQLHLQCIKKALDVNLAVVNSLIDMYCTCARILDARSLFDGTPERNLITWNTM 244
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLML----NICANVASLNLGRQIHAFA 360
I+G+++ D A L +M +D C L + CA++A+L G+Q+H
Sbjct: 245 IAGYSQCD--PLMALQLLLEM-------NDEPNCFTLTSITSACADLAALRCGKQVHGAV 295
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
+ S D +GNAL+DMY+K G I +A FD MG K+ SWTS+IAGY +GYG+EA+
Sbjct: 296 LRRSYSDDLQMGNALVDMYSKCGSITNAKNVFDRMGCKDKFSWTSMIAGYGMNGYGNEAV 355
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDL 480
+L+ M H G+ P+ V FLSL+ +CSH GL EGW F MIN+Y + P E + VV+L
Sbjct: 356 QLFSSMIHAGVHPDHVVFLSLISSCSHAGLVDEGWNFFRSMINEYNLQPNKEVYGSVVNL 415
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNY 540
AR G+L A ++I M P +W A+LGA ++ N +G LAAR + ++ P+ NY
Sbjct: 416 LARAGRLREALDLIDTMPFAPDEYVWGALLGASKMHNNVEMGRLAARKITEINPDDVKNY 475
Query: 541 VVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
++L++IY A W TR+ + RK G S+++ K
Sbjct: 476 IMLASIYAAGSKWGEYAFTRRSLRGIGSRKEAGISWIEVMDK 517
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 132/243 (54%), Gaps = 5/243 (2%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H I + NL + +I Y +L AR FD PERN+++W MI+GY+Q
Sbjct: 194 LHLQCIKKALDVNLAVVNSLIDMYCTCARILDARSLFDGTPERNLITWNTMIAGYSQC-- 251
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ L+ +L N FT +S ACA + L+ G+ + G++ + + ++L + +A
Sbjct: 252 --DPLMALQLLLEMNDEPNCFTLTSITSACADLAALRCGKQVHGAVLRRSYSDDLQMGNA 309
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+D+Y+KCG I +A +F+R+ KD SW +MI G M G+ +++ LF SM+ G+ PD
Sbjct: 310 LVDMYSKCGSITNAKNVFDRMGCKDKFSWTSMIAGYGMNGYGNEAVQLFSSMIHAGVHPD 369
Query: 232 CFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
S++ + S G+ + +I + L+ + ++ GS++++ A+ G +R A L
Sbjct: 370 HVVFLSLISSCSHAGLVDEGWNFFRSMINEYNLQPNKEVYGSVVNLLARAGRLREALDLI 429
Query: 291 RSM 293
+M
Sbjct: 430 DTM 432
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 96/201 (47%), Gaps = 3/201 (1%)
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
S K + I G++ A L+ M + D+++ TA++SG+A + +EA D+F+ M
Sbjct: 2 SQKHATTFISSLCSRGAVCHARALFDEMPERDVVAWTAMLSGYA-SNGLRREALDVFRRM 60
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE- 384
+ ++ L +L C + + +HA A + V NALID YA E
Sbjct: 61 VAAGAAPNEYTLSSVLTACRGPCAPAMAMPLHAVAVRRGVDRMPYVVNALIDSYASLAEG 120
Query: 385 IADANRAFDEMGD-KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
+ DA R FD +G + SWTS+IAGYA+ G + L+K M +G+ + L
Sbjct: 121 VVDARRLFDALGSGRTAASWTSMIAGYARWGQERTGLRLFKTMLKDGVELSTFACSIALH 180
Query: 444 ACSHTGLTCEGWELFTDMINK 464
AC+ C G +L I K
Sbjct: 181 ACTLVIDLCLGQQLHLQCIKK 201
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 2/181 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T S+ C D A R +H ++ Y +L + ++ Y+K G + +A+ FDRM
Sbjct: 271 TLTSITSACADLAALRCGKQVHGAVLRRSYSDDLQMGNALVDMYSKCGSITNAKNVFDRM 330
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL-QGG 150
++ SWT+MI+GY NGY A+ +FS+M+ +GV + + S + +C+ + +G
Sbjct: 331 GCKDKFSWTSMIAGYGMNGYGNEAVQLFSSMIHAGVHPDHVVFLSLISSCSHAGLVDEGW 390
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGGLAM 209
+ I + N V ++++L A+ G + +A L + + D W A++G M
Sbjct: 391 NFFRSMINEYNLQPNKEVYGSVVNLLARAGRLREALDLIDTMPFAPDEYVWGALLGASKM 450
Query: 210 Q 210
Sbjct: 451 H 451
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 192/584 (32%), Positives = 316/584 (54%), Gaps = 16/584 (2%)
Query: 2 NIVRANFKTGQLKQALK-----FSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHA 54
+I+ A + G+ +A+ FS+ C L P T+ +L+ C+ ++ +H
Sbjct: 90 SIISAYVRFGKYHEAMNCVNQLFSM-CGGGHLRPDFYTFPPILKACVSLVDGKK---VHC 145
Query: 55 HIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDEN 114
+ G+E ++ ++ ++ Y++ G + A K F MP ++V SW AMISG+ QNG
Sbjct: 146 CVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAG 205
Query: 115 ALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLD 174
AL V + M GV+ + T +S L CA+ + G +I + K ++FV +AL++
Sbjct: 206 ALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALIN 265
Query: 175 LYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFT 234
+Y+K G ++DA ++F+++E +D+VSWN++I + F+ M G++PD T
Sbjct: 266 MYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLT 325
Query: 235 LGSILRASVGGIELMKISQ-IHDLIIKLG-LESSNKLTGSLIDVYAKYGSIRSAYQLYRS 292
+ S L + + +IS+ I +I+ L+ + +L+++YAK G + A+ ++
Sbjct: 326 VVS-LTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQ 384
Query: 293 MLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDV-ILCLMLNICANVASLN 351
+ + D IS L++G+ ++ + EA D + M + I + ++ ++V +L
Sbjct: 385 LPRKDTISWNTLVTGYTQN-GLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQ 443
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
G +IHA K D V LID+Y K G + DA F E+ + W ++IA
Sbjct: 444 QGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLG 503
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
HG G EA++L+K M E + + +TF+SLL ACSH+GL EG + F M +Y I P
Sbjct: 504 IHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSL 563
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
+H+ C+VDL R G LE AY ++R M I+P AS+W A+L AC IYGN LG LA+ L +
Sbjct: 564 KHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLE 623
Query: 532 MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYS 575
++ E YV+LSNIY W+ K R L +R LRK PG+S
Sbjct: 624 VDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWS 667
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 160/566 (28%), Positives = 298/566 (52%), Gaps = 26/566 (4%)
Query: 13 LKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVI 72
LK KF S +L + + +L C++ A ++ +HA ++ G N+ LSTK+I
Sbjct: 5 LKSVSKFYKSATTSLHKDADFNALFNSCVNVNATKK---LHALLLVFGKSQNIVLSTKLI 61
Query: 73 IFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENAL----LVFSAMLRSGVR 128
Y GD+ +R FD + ++N+ SW ++IS Y + G A+ +FS +R
Sbjct: 62 NLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLR 121
Query: 129 ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWIL 188
+ +T+ L+AC L G+ + + K F +++FV ++L+ LY++ G ++ A +
Sbjct: 122 PDFYTFPPILKACVS---LVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKV 178
Query: 189 FERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIEL 248
F + KDV SWNAMI G G + + M +G+K D T+ SIL ++
Sbjct: 179 FVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDV 238
Query: 249 MKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGF 308
+ IH ++K GL+S ++ +LI++Y+K+G ++ A ++ M D++S ++I+ +
Sbjct: 239 INGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAY 298
Query: 309 ARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ-SSY 367
++++ S A FK M L + D + + + +I + ++ + R I F + +
Sbjct: 299 EQNNDPST-ALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDK 357
Query: 368 DAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMK 427
D +GNAL++MYAK G + A+ FD++ K+ ISW +L+ GY ++G EAI+ Y M+
Sbjct: 358 DVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMME 417
Query: 428 H-EGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF--SCVVDLFARR 484
+PN T++S++ A SH G +G ++ +I L + F +C++DL+ +
Sbjct: 418 ECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYL---DVFVATCLIDLYGKC 474
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEK----SVNY 540
G+LE A ++ ++ + T+ W+AI+ + I+G GE A + DM E+ + +
Sbjct: 475 GRLEDAMSLFYEIP-RDTSVPWNAIIASLGIHGR---GEEALQLFKDMLAERVKADHITF 530
Query: 541 VVLSNIYTAAGAWDNARKTRKLMEER 566
V L + + +G D +K +M++
Sbjct: 531 VSLLSACSHSGLVDEGQKCFDIMQKE 556
>gi|242039301|ref|XP_002467045.1| hypothetical protein SORBIDRAFT_01g018760 [Sorghum bicolor]
gi|241920899|gb|EER94043.1| hypothetical protein SORBIDRAFT_01g018760 [Sorghum bicolor]
Length = 564
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 188/541 (34%), Positives = 300/541 (55%), Gaps = 4/541 (0%)
Query: 38 QFCIDKKAERQAHLIHAHII-TNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNV 96
Q C R+ +HA ++ T ++ L+ +I Y+ D SA + F +P N
Sbjct: 25 QSCGRTGDIRRGRALHARLLLTGAAATSTFLANHLITMYSYCADAASAVRVFGVLPRPNP 84
Query: 97 VSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGS 156
VSWT ++SG QN +AL F+AM R+ V QF SSA RA A + + G +
Sbjct: 85 VSWTTLVSGLVQNSMHHDALAAFAAMRRAHVAPTQFALSSAARAAAALSAPRPGTQLHCI 144
Query: 157 IQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDS 216
+ F LFV S L D+Y+KCG +++A +F+++ +D V+W MI G A G +
Sbjct: 145 GTRFGFDTELFVASNLADMYSKCGLLDEACRVFDQMPHRDAVTWTTMIDGYAKNGSLKAA 204
Query: 217 FWLFRSMMRQGM-KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLID 275
FR M +G+ D S L AS G + +H IIK G E + +L+D
Sbjct: 205 ILAFRDMKCEGLVGADQHVFCSALSASGGLKDGWFGRSLHCCIIKAGFELETVVRNALLD 264
Query: 276 VYAKYGSIRSAYQLYR-SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD 334
+YAK G + SA ++ + +++S T+LI G+ D +EA + + ++ + + ++
Sbjct: 265 MYAKSGDLESASRVVKIDPGGWNVVSGTSLIDGYIEVDR-IEEALETYTELGRQGVEPNE 323
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE 394
M+ CA L G Q+HA K D+ VG+ L+ MY K G I+ + + F+E
Sbjct: 324 FTFASMIKGCAMQDLLEQGAQLHAQVIKTSLISDSFVGSTLVYMYGKCGLISLSLQLFNE 383
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG 454
+G + ++W ++I YA+HG+G AI+ + +M G+ PN +TF+ LL ACSH GL EG
Sbjct: 384 IGYHSEVAWNAVINVYAQHGHGWGAIQAFDRMTASGIRPNHITFVCLLTACSHAGLVDEG 443
Query: 455 WELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACS 514
E F M + + I P+ EH+SC++D++ R G+L+ A I +M +KP A W ++LGAC
Sbjct: 444 LEYFYSMKDAHGIEPKEEHYSCIIDMYGRAGRLDEAEKFISEMPVKPNAYGWCSLLGACR 503
Query: 515 IYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGY 574
+ GN LGE+AA+NL ++P+ + +V LS IY + G W++A+ RKLM++ S++ PG+
Sbjct: 504 MRGNKELGEIAAQNLMKLDPDNTGIHVSLSGIYASLGQWEDAKSVRKLMKDSSIKNLPGF 563
Query: 575 S 575
S
Sbjct: 564 S 564
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 113/234 (48%), Gaps = 6/234 (2%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITN 59
+++ + ++++AL+ ++P+ T+ S+++ C + Q +HA +I
Sbjct: 293 SLIDGYIEVDRIEEALETYTELGRQGVEPNEFTFASMIKGCAMQDLLEQGAQLHAQVIKT 352
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
S+ + + ++ Y K G + + + F+ + + V+W A+I+ YAQ+G+ A+ F
Sbjct: 353 SLISDSFVGSTLVYMYGKCGLISLSLQLFNEIGYHSEVAWNAVINVYAQHGHGWGAIQAF 412
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK-SALLDLYAK 178
M SG+R N T+ L AC+ + G S++ +E S ++D+Y +
Sbjct: 413 DRMTASGIRPNHITFVCLLTACSHAGLVDEGLEYFYSMKDAHGIEPKEEHYSCIIDMYGR 472
Query: 179 CGWIEDAW-ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
G +++A + E + + W +++G M+G + +++M+ + PD
Sbjct: 473 AGRLDEAEKFISEMPVKPNAYGWCSLLGACRMRGNKELGEIAAQNLMK--LDPD 524
>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
Length = 719
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 187/552 (33%), Positives = 284/552 (51%), Gaps = 97/552 (17%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ S+L+ C + IHAH I ++SN + T ++ YAK +L A F+
Sbjct: 140 TWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELA 199
Query: 92 PE-RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
P+ RN V WTAM++GY+QNG A+ F M G+ NQFT+ S L AC + G
Sbjct: 200 PDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFG 259
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ G I + F N+FV SAL+D+Y+KCG + +A + E +E D VSWN+MI G Q
Sbjct: 260 AQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQ 319
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
G +++ LFR M + MK D FT S+ +
Sbjct: 320 GLGEEALSLFRIMHLRHMKIDEFTYPSL------------------------------VN 349
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
+L+D+YAK G A+ ++ M D+IS T+L++G + ++ +EA LF +M + +
Sbjct: 350 NALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSY-EEALRLFCEMRIMGI 408
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
D +++ +L +A+ N+L+ MYAK G I DAN+
Sbjct: 409 HPDQIVIAAVL---------------------------SALDNSLVSMYAKCGCIEDANK 441
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
FD M ++VI+WT+LI GYA++G G
Sbjct: 442 VFDSMEIQDVITWTALIVGYAQNGRGR--------------------------------- 468
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
+ F M Y I P EH++C++DL R G+L A ++ QM ++P A++W A+L
Sbjct: 469 -----DYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALL 523
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
AC ++GN LGE AA NLF++EP+ +V YV+LSN+Y+AAG W+ A KTR+LM+ R + K
Sbjct: 524 AACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSK 583
Query: 571 NPGYSFLQSSKK 582
PG S+++ S K
Sbjct: 584 EPGCSWIEMSSK 595
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 194/405 (47%), Gaps = 43/405 (10%)
Query: 170 SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
+ ++ YA G + +A LF + ++W+++I G G + ++ LF M +G +
Sbjct: 76 NTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGER 135
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
P+ FT GS+LR + L K QIH IK +S+ + L+D+YAK I A L
Sbjct: 136 PNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYL 195
Query: 290 YR-SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
+ + K + + TA+++G++++ + K A + F+DM + + + +L C +++
Sbjct: 196 FELAPDKRNHVLWTAMVTGYSQNGDGHK-AIECFRDMRGEGIECNQFTFPSILTACGSIS 254
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA 408
+ G Q+H + + VG+AL+DMY+K G++++A R + M + +SW S+I
Sbjct: 255 ACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIV 314
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
G + G G EA+ L++ M M ++ T+ SL+
Sbjct: 315 GCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSLV-------------------------- 348
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN--TSLGELAA 526
+ +VD++A+RG + A+++ +M K S W++++ C G+ +L
Sbjct: 349 -----NNALVDMYAKRGYFDYAFDVFEKMTDKDVIS-WTSLVTGCVHNGSYEEALRLFCE 402
Query: 527 RNLFDMEPEKSVNYVVLS-------NIYTAAGAWDNARKTRKLME 564
+ + P++ V VLS ++Y G ++A K ME
Sbjct: 403 MRIMGIHPDQIVIAAVLSALDNSLVSMYAKCGCIEDANKVFDSME 447
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 40/210 (19%)
Query: 29 DPSTYMSLLQFCIDKKAERQA-------HLIHAHIITNGYESNLHLSTKVIIFYAKVGDV 81
DP ++ S++ C+ + +A HL H I Y S ++ ++ YAK G
Sbjct: 305 DPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPS--LVNNALVDMYAKRGYF 362
Query: 82 LSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC 141
A F++M +++V+SWT++++G NG E AL +F M G+ +Q ++ L A
Sbjct: 363 DYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSA- 421
Query: 142 ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN 201
+ ++L+ +YAKCG IEDA +F+ +E +DV++W
Sbjct: 422 --------------------------LDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWT 455
Query: 202 AMIGGLAMQGFNDDSFWLFRSMMR-QGMKP 230
A+I G A G D F+SM G+KP
Sbjct: 456 ALIVGYAQNGRGRD---YFQSMEEVYGIKP 482
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 5/193 (2%)
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
F D N +I YA SG + +A + F E ++ I+W+SLI+GY ++G EA+
Sbjct: 64 FDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEAL 123
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDL 480
EL+ +M++EG PN T+ S+L CS L +G ++ I K + A + +VD+
Sbjct: 124 ELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAI-KTQFDSNAFVVTGLVDM 182
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEK-SVN 539
+A+ + A + K LW+A++ Y G A DM E N
Sbjct: 183 YAKCKCILEAEYLFELAPDKRNHVLWTAMVTG---YSQNGDGHKAIECFRDMRGEGIECN 239
Query: 540 YVVLSNIYTAAGA 552
+I TA G+
Sbjct: 240 QFTFPSILTACGS 252
>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
Length = 825
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 182/540 (33%), Positives = 303/540 (56%), Gaps = 14/540 (2%)
Query: 49 AHLIHAHIITNG--YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGY 106
A++++ ++ G Y + + + I YA++G V AR+ FD ERN W MI GY
Sbjct: 237 ANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGY 296
Query: 107 AQNGYDENALLVFSAMLRS-GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVEN 165
QN A+ +F ++ S + T+ SAL A ++++WL GR + I K +
Sbjct: 297 VQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILKSSTILQ 356
Query: 166 LFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR 225
+ + +A++ +Y++CG I ++ +F + +DVV+WN M+ G +D+ L M +
Sbjct: 357 VVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQK 416
Query: 226 QGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
QG D TL ++L +++ E+ K Q H +I+ G++ + G LID+YAK G I
Sbjct: 417 QGFMVDSVTLTALLSLASNLRSQEIGK--QAHAYLIRHGIQFEG-MDGYLIDMYAKSGLI 473
Query: 284 RSAYQLYR--SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLML 341
+A QL+ S D + A+I+G+ ++ S+E F +F+ MI + + + V L +L
Sbjct: 474 TTAQQLFEKNSXYDRDEATWNAMIAGYTQN-GLSEEGFAVFRKMIEQNVRPNAVTLASIL 532
Query: 342 NICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVI 401
C + ++ LG+QIH FA + + + VG AL+DMY+KSG I A F E +KN +
Sbjct: 533 PACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAETLEKNSV 592
Query: 402 SWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM 461
++T++I Y +HG G A+ L+ M G+ P+ VTF+++L ACS+ GL EG +F M
Sbjct: 593 TYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSM 652
Query: 462 INKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP-TASLWSAILGACSIYGNTS 520
+Y+I P +EH+ CV D+ R G++ AY ++ + + T +W ++LGAC I+G
Sbjct: 653 EREYKIQPSSEHYCCVADMLGRVGRVXEAYEFVKGLGEEGNTFRIWGSLLGACRIHGEFE 712
Query: 521 LGELAARNLFDMEPEKSVN--YVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
LG++ A L +ME + +V+LSNIY A G WDN + RK M ++ L K G S+++
Sbjct: 713 LGKVVANKLLEMEKGSXLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWVE 772
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 147/576 (25%), Positives = 278/576 (48%), Gaps = 40/576 (6%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG-------YESNLHLSTKVIIFYA 76
P D T+ S L+ C ++ + +H H++ + Y S L++ + +
Sbjct: 98 PSPKFDSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVP 157
Query: 77 KVGDVLS------ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
+G R+ FD M +RNVV+W MIS Y + A +F M+R G+R
Sbjct: 158 YLGTAYDFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPT 217
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQK--GRFVENLFVKSALLDLYAKCGWIEDAWIL 188
++ + A RM ++ G + K +V++ FV S+ + +YA+ G ++ A +
Sbjct: 218 PVSFVNVFPAVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREI 277
Query: 189 FERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR-QGMKPDCFTLGSILRASVGGIE 247
F+ ++ WN MIGG ++ LF +M + D T S L A + ++
Sbjct: 278 FDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTA-ISQLQ 336
Query: 248 LMKIS-QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
+ + Q+H I+K + ++I +Y++ GSI ++++++ +ML+ D+++ ++S
Sbjct: 337 WLDLGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVS 396
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
F + + E L +M + +D V L +L++ +N+ S +G+Q HA+ ++
Sbjct: 397 AFVQ-NGLDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQ 455
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMG--DKNVISWTSLIAGYAKHGYGHEAIELYK 424
++ G LIDMYAKSG I A + F++ D++ +W ++IAGY ++G E +++
Sbjct: 456 FEGMDG-YLIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFR 514
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF--SCVVDLFA 482
KM + + PN VT S+L AC+ G G ++ I R F + ++D+++
Sbjct: 515 KMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAI---RCFLNQNVFVGTALLDMYS 571
Query: 483 RRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD------MEPEK 536
+ G + A N+ + K + + + IL YG +GE A +LF ++P+
Sbjct: 572 KSGAITYAENVFAETLEKNSVTYTTMILS----YGQHGMGE-RALSLFHAMLGSGIKPD- 625
Query: 537 SVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNP 572
SV +V + + + AG D + + M ER + P
Sbjct: 626 SVTFVAILSACSYAGLVDEGLRIFQSM-EREYKIQP 660
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 122/498 (24%), Positives = 243/498 (48%), Gaps = 52/498 (10%)
Query: 77 KVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS-GVRANQFTYS 135
+ G A FD +P V W +I G+ N +ALL ++ M S + + +T+S
Sbjct: 49 RQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFS 108
Query: 136 SALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC----GWIEDAW----- 186
S L+ACA+ R L+ G+ + + + F + V ++LL++Y+ C ++ A+
Sbjct: 109 STLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNC 168
Query: 187 ----ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS 242
+F+ + +++VV+WN MI ++F +FR+MMR G++P + ++ A
Sbjct: 169 DLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAV 228
Query: 243 VGGIELMKISQIHDLIIKLGLESSNK--LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
+ + ++ L++KLG + + + S I +YA+ G + A +++ L+ +
Sbjct: 229 WRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEV 288
Query: 301 CTALISGFARDDNHSKEAFDLF-KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
+I G+ + +N EA DLF + M ++ +DDV L + + L+LGRQ+HA+
Sbjct: 289 WNTMIGGYVQ-NNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAY 347
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
K + + NA+I MY++ G I + + F M +++V++W ++++ + ++G E
Sbjct: 348 ILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEG 407
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACSHT----------------GLTCEGWELF-TDMI 462
+ L +M+ +G + + VT +LL S+ G+ EG + + DM
Sbjct: 408 LMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDGYLIDMY 467
Query: 463 NKYRILPRAEH--------------FSCVVDLFARRGQLESAYNMIRQM---NIKPTASL 505
K ++ A+ ++ ++ + + G E + + R+M N++P A
Sbjct: 468 AKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVT 527
Query: 506 WSAILGACSIYGNTSLGE 523
++IL AC+ G LG+
Sbjct: 528 LASILPACNPMGTIGLGK 545
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 184/547 (33%), Positives = 298/547 (54%), Gaps = 6/547 (1%)
Query: 35 SLLQFCIDKKAERQAHLIHAHII-TNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPE 93
SLL+ + IHAHII T+ LS ++ Y+K+ + SA+
Sbjct: 11 SLLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHL 70
Query: 94 RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMI 153
R VV+WT++ISG N ALL F+ M R V+ N FT+ +A A ++ G+ I
Sbjct: 71 RTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQI 130
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN 213
G KG + ++FV + D+Y K G+ DA +F+ + ++++ +WNA I +
Sbjct: 131 HGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRS 190
Query: 214 DDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSL 273
D+ F+ + +P+ T + L A V + L Q+H I++ G + + L
Sbjct: 191 LDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGL 250
Query: 274 IDVYAKYGSIRSAYQLY-RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI 332
ID Y K G I SA ++ R + +++S ++++ + NH +E + K++
Sbjct: 251 IDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQ--NHEEERACMVFLQARKEVEP 308
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAF 392
D ++ +L+ CA + L LGR +HA A K + VG+AL+DMY K G I +A + F
Sbjct: 309 TDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVF 368
Query: 393 DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMK--HEGMVPNDVTFLSLLFACSHTGL 450
E+ ++N+++W ++I GYA G A+ L+++M G+ P+ VT +S+L CS G
Sbjct: 369 SELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGA 428
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
G ++F M Y I P AEHF+CVVDL R G ++ AY I+ M I+PT S+W A+L
Sbjct: 429 VERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALL 488
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
GAC ++G T LG++AA LF+++ S N+VVLSN+ +AG W+ A RK M++ ++K
Sbjct: 489 GACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKK 548
Query: 571 NPGYSFL 577
N GYS++
Sbjct: 549 NVGYSWI 555
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 149/284 (52%), Gaps = 7/284 (2%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ + L C+D +HA I+ GY+ ++ ++ +I FY K GD++SA F+R+
Sbjct: 211 TFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRI 270
Query: 92 PER-NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
R NVVSW +M++ QN +E A +VF R V F SS L ACA + L+ G
Sbjct: 271 GNRKNVVSWCSMLAALVQNHEEERACMVF-LQARKEVEPTDFMISSVLSACAELGGLELG 329
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
R + K +N+FV SAL+D+Y KCG IE+A +F + +++V+WNAMIGG A Q
Sbjct: 330 RSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQ 389
Query: 211 GFNDDSFWLFRSMM--RQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLESS 266
G D + LF M G++P TL SIL + VG +E I + + G+E
Sbjct: 390 GDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVE-RGIQIFESMRLNYGIEPG 448
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR 310
+ ++D+ + G + AY+ ++M IS + G R
Sbjct: 449 AEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACR 492
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 192/584 (32%), Positives = 316/584 (54%), Gaps = 16/584 (2%)
Query: 2 NIVRANFKTGQLKQALK-----FSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHA 54
+I+ A + G+ +A+ FS+ C L P T+ +L+ C+ ++ +H
Sbjct: 90 SIISAYVRFGKYHEAMNCVNQLFSM-CGGGHLRPDFYTFPPILKACVSLVDGKK---VHC 145
Query: 55 HIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDEN 114
+ G+E ++ ++ ++ Y++ G + A K F MP ++V SW AMISG+ QNG
Sbjct: 146 CVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAG 205
Query: 115 ALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLD 174
AL V + M GV+ + T +S L CA+ + G +I + K ++FV +AL++
Sbjct: 206 ALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALIN 265
Query: 175 LYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFT 234
+Y+K G ++DA ++F+++E +D+VSWN++I + F+ M G++PD T
Sbjct: 266 MYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLT 325
Query: 235 LGSILRASVGGIELMKISQ-IHDLIIKLG-LESSNKLTGSLIDVYAKYGSIRSAYQLYRS 292
+ S L + + +IS+ I +I+ L+ + +L+++YAK G + A+ ++
Sbjct: 326 VVS-LTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQ 384
Query: 293 MLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDV-ILCLMLNICANVASLN 351
+ + D IS L++G+ ++ + EA D + M + I + ++ ++V +L
Sbjct: 385 LPRKDTISWNTLVTGYTQN-GLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQ 443
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
G +IHA K D V LID+Y K G + DA F E+ + W ++IA
Sbjct: 444 QGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLG 503
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
HG G EA++L+K M E + + +TF+SLL ACSH+GL EG + F M +Y I P
Sbjct: 504 IHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSL 563
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
+H+ C+VDL R G LE AY ++R M I+P AS+W A+L AC IYGN LG LA+ L +
Sbjct: 564 KHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLE 623
Query: 532 MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYS 575
++ E YV+LSNIY W+ K R L +R LRK PG+S
Sbjct: 624 VDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWS 667
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 160/566 (28%), Positives = 298/566 (52%), Gaps = 26/566 (4%)
Query: 13 LKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVI 72
LK KF S +L + + +L C++ A ++ +HA ++ G N+ LSTK+I
Sbjct: 5 LKSVSKFYKSATTSLHKDADFNALFNSCVNVNATKK---LHALLLVFGKSQNIVLSTKLI 61
Query: 73 IFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENAL----LVFSAMLRSGVR 128
Y GD+ +R FD + ++N+ SW ++IS Y + G A+ +FS +R
Sbjct: 62 NLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLR 121
Query: 129 ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWIL 188
+ +T+ L+AC L G+ + + K F +++FV ++L+ LY++ G ++ A +
Sbjct: 122 PDFYTFPPILKACVS---LVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKV 178
Query: 189 FERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIEL 248
F + KDV SWNAMI G G + + M +G+K D T+ SIL ++
Sbjct: 179 FVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDV 238
Query: 249 MKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGF 308
+ IH ++K GL+S ++ +LI++Y+K+G ++ A ++ M D++S ++I+ +
Sbjct: 239 INGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAY 298
Query: 309 ARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ-SSY 367
++++ S A FK M L + D + + + +I + ++ + R I F + +
Sbjct: 299 EQNNDPST-ALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDK 357
Query: 368 DAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMK 427
D +GNAL++MYAK G + A+ FD++ K+ ISW +L+ GY ++G EAI+ Y M+
Sbjct: 358 DVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMME 417
Query: 428 H-EGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF--SCVVDLFARR 484
+PN T++S++ A SH G +G ++ +I L + F +C++DL+ +
Sbjct: 418 ECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYL---DVFVATCLIDLYGKC 474
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEK----SVNY 540
G+LE A ++ ++ + T+ W+AI+ + I+G GE A + DM E+ + +
Sbjct: 475 GRLEDAMSLFYEIP-RDTSVPWNAIIASLGIHGR---GEEALQLFKDMLAERVKADHITF 530
Query: 541 VVLSNIYTAAGAWDNARKTRKLMEER 566
V L + + +G D +K +M++
Sbjct: 531 VSLLSACSHSGLVDEGQKCFDIMQKE 556
>gi|225439799|ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Vitis vinifera]
Length = 667
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 189/594 (31%), Positives = 323/594 (54%), Gaps = 37/594 (6%)
Query: 23 CPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVL 82
C LD + L+Q C D + RQA +HA I+ + + L++K+I FY+K +
Sbjct: 27 CSVNGLDYGAFGRLIQHCSDHRLLRQAKQLHARIVLSSLTPDNFLASKLITFYSKSNHLY 86
Query: 83 SARKAFDRMPERNVVSWTAMISGYAQNG---YDENALLVFSAMLRSGVRANQFTYSSALR 139
A K FD++ ++N+ SW AM+ GY+ + + N L ++ + FT + L+
Sbjct: 87 EAHKVFDKILDKNIFSWNAMLIGYSIHNMHVHTLNLLSSLLPSYSLTLKPDNFTITCVLK 146
Query: 140 ACARMRWLQG-GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVV 198
A + + + +Q + + F ++FV +AL+ Y++C A ILF+R+ +D+V
Sbjct: 147 ALSVLFPDSILAKEVQCFVLRHGFDSDIFVVNALITYYSRCDEYGIARILFDRMHDRDIV 206
Query: 199 SWNAMIGGLAMQGFNDDSFWLFRSMM-RQGMKPDCFTLGSILRASVGGIELMKISQIHDL 257
SWN+MI G + GF +D L+R M+ G++P+ T+ S+L+A +L+ ++H
Sbjct: 207 SWNSMIAGYSQGGFYEDCKELYRKMLDSTGLRPNGVTVVSVLQACAQTNDLVFGMKVHQF 266
Query: 258 IIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKE 317
II+ +E SLI +YAK GS+ A +L+ M D ++ +++SG+ K
Sbjct: 267 IIERKVEMDVSAHNSLIGLYAKCGSLDYARELFNEMSNKDEVTYGSIVSGYMTHGFVDK- 325
Query: 318 AFDLFKDMILKKMGI-DDVILCLMLNIC-----------------ANVASL--------- 350
A DLF++M ++ + VI L+ N C N +L
Sbjct: 326 AMDLFREMKNPRLSTWNAVISGLVQNNCNEGILELVQEMQEFGFRPNAVTLSSILPTFSC 385
Query: 351 --NL--GRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
NL G+ IHA+A + +++ V ++ID YAK G + A FD+ D+++I WT++
Sbjct: 386 FSNLKGGKAIHAYAIRNGYAHNIYVATSIIDAYAKLGFLRGAQWVFDQSKDRSLIVWTAI 445
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYR 466
I+ Y+ HG + A+ L+ M G P+ VTF ++L AC+H+G+ E W++F +M KY
Sbjct: 446 ISAYSAHGDANAALRLFGDMLSNGTQPDPVTFTAVLAACAHSGMVNEAWKIFDEMFLKYG 505
Query: 467 ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAA 526
P EH++C+V + +R G L A I +M I+P A +W A+L S+ G+ LG+
Sbjct: 506 FQPCVEHYACMVGVLSRAGMLSEAAEFICKMPIEPNAKVWGALLNGVSVSGDVELGKFVC 565
Query: 527 RNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSS 580
+LF+MEPE + NYV+++N+Y+ AG W+ A R+ M++ L+K PG S++++S
Sbjct: 566 DHLFNMEPENTGNYVIMANLYSQAGRWEEAENIREKMKKIGLKKIPGTSWIETS 619
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 172/488 (35%), Positives = 283/488 (57%), Gaps = 27/488 (5%)
Query: 115 ALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLD 174
AL ++ M + + + F S L+AC+++ + G+ I G K V ++FV +AL+
Sbjct: 93 ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152
Query: 175 LYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA--MQGFNDDSF--W------------ 218
+Y++CG + A +LF+++ +DVVSW+ MI GF+ S W
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212
Query: 219 ------LFRSMMRQGMKPDCFTLGSILRAS--VGGIELMKISQIHDLIIKLGLESSNKLT 270
LF M+ + + P+ T+ S++ + VG ++L K ++H I++ G S L
Sbjct: 213 LEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGK--RLHAYILRNGFGMSLALA 270
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
+L+D+Y K G IRSA ++ SM D+++ TA+IS +A+ N AF LF M +
Sbjct: 271 TALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQA-NCIDYAFQLFVQMRDNGV 329
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
+++ + +L++CA +L++G+ HA+ K D + ALIDMYAK G+I+ A R
Sbjct: 330 RPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQR 389
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
F E D+++ +W ++AGY HGYG +A++L+ +M+ G+ PND+TF+ L ACSH GL
Sbjct: 390 LFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGL 449
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
EG LF MI+ + ++P+ EH+ C+VDL R G L+ AY MI M + P ++W A+L
Sbjct: 450 VVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAML 509
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
AC I+ N+++GELAAR L +EP+ V++SNIY AA W++ RK +++ ++K
Sbjct: 510 AACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKK 569
Query: 571 NPGYSFLQ 578
PG S ++
Sbjct: 570 EPGMSSIE 577
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 208/455 (45%), Gaps = 51/455 (11%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPSTYM-------------SLLQFCIDKKAERQ 48
+I R +F Q F S P L+ TYM S+L+ C R
Sbjct: 69 HITRTHFNHAQQVSFSPFE-SHPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARM 127
Query: 49 AHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSW--------- 99
IH + NG S++ + ++ Y++ G ++SAR FD+M ER+VVSW
Sbjct: 128 GKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYIT 187
Query: 100 -------------TAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
TAMI+GY + E +F M+ V N T S + +C +
Sbjct: 188 LFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGA 247
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
+Q G+ + I + F +L + +AL+D+Y KCG I A +F+ ++ KDV++W AMI
Sbjct: 248 VQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISA 307
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLE 264
A D +F LF M G++P+ T+ S+L A G +++ K H I K G+E
Sbjct: 308 YAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGK--WFHAYIDKQGVE 365
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
L +LID+YAK G I A +L+ + DI + +++G+ + ++A LF +
Sbjct: 366 VDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGM-HGYGEKALKLFTE 424
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLG-----RQIHAFAFKYQSSYDAAVGNALIDMY 379
M + +D+ L+ C++ + G + IH F + + ++D+
Sbjct: 425 METLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYG----CMVDLL 480
Query: 380 AKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKH 413
++G + +A + + M N+ W +++A H
Sbjct: 481 GRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIH 515
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 109/227 (48%), Gaps = 24/227 (10%)
Query: 308 FARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSY 367
F+ ++H + A + + M + +D I+ +L C+ ++ +G++IH F+ K
Sbjct: 83 FSPFESHPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVS 142
Query: 368 DAAVGNALIDMYAKSGEIADANRAFDEMGDKNV----------------------ISWTS 405
D V NAL+ MY++ G + A FD+M +++V +SWT+
Sbjct: 143 DVFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTA 202
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
+IAGY + E L+ +M E + PND+T LSL+ +C G G L ++
Sbjct: 203 MIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNG 262
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
+ A + +VD++ + G++ SA + M K + W+A++ A
Sbjct: 263 FGMSLAL-ATALVDMYGKCGEIRSARAIFDSMKNKDVMT-WTAMISA 307
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 178/559 (31%), Positives = 306/559 (54%), Gaps = 3/559 (0%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
D D T++ +L + + +H + G + L +S +I Y K+ + A
Sbjct: 317 DLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLA 376
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
R F+ M ER+++SW ++I+G AQ+ + A+ +F +LR G++ + +T +S L+A + +
Sbjct: 377 RTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSL 436
Query: 145 -RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
L + I K V + FV +AL+D Y++ +++A +LF R D+V+WNAM
Sbjct: 437 PEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGR-NNFDLVAWNAM 495
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGL 263
+ G + LF M +QG + D FTL ++L+ + + Q+H IK G
Sbjct: 496 MSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGY 555
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
+ ++ ++D+Y K G + +A + S+ D ++ T LISG ++ + A +F
Sbjct: 556 DLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISG-CIENGEEERALHVFS 614
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
M L + D+ + + + + +L GRQIHA A K + D VG +L+DMYAK G
Sbjct: 615 QMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCG 674
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
I DA F + N+ +W +++ G A+HG G EA++L+K+M+ G+ P+ VTF+ +L
Sbjct: 675 SIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLS 734
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
ACSH+GL E ++ M Y I P EH+SC+ D R G ++ A N+I M+++ +A
Sbjct: 735 ACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEASA 794
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
S++ +L AC + G+T G+ A L ++EP S YV+LSN+Y AA WD + R +M
Sbjct: 795 SMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMM 854
Query: 564 EERSLRKNPGYSFLQSSKK 582
+ ++K+PG+S+++ K
Sbjct: 855 KGHKVKKDPGFSWIEVKNK 873
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 124/536 (23%), Positives = 233/536 (43%), Gaps = 79/536 (14%)
Query: 53 HAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQN--G 110
HA I+ L +I Y+K G + AR+ FD+MPER++VSW ++++ YAQ+ G
Sbjct: 69 HARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEG 128
Query: 111 YDEN---ALLVFSAMLRSGVRANQFTYSSALRACARMRW---------------LQGGRM 152
EN A L+F + + V ++ T S L+ C + L G
Sbjct: 129 VVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDF 188
Query: 153 IQGS----------IQKGRFV------ENLFVKSALLDLYAKCGWIEDA----------- 185
+ G+ +++GR + ++ + + +L Y + G+ E+A
Sbjct: 189 VAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSG 248
Query: 186 -------WILFERIERKD--------------------VVSWNAMIGGLAMQGFNDDSFW 218
L RI D ++S N ++ G G
Sbjct: 249 LHPNEITLRLLSRISGDDSEAGQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLK 308
Query: 219 LFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYA 278
F M+ ++ D T +L +V L Q+H + +KLGL+ ++ SLI++Y
Sbjct: 309 CFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYC 368
Query: 279 KYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILC 338
K I A ++ +M + D+IS ++I+G A+ D EA LF ++ + D +
Sbjct: 369 KLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEV-EAVCLFMQLLRCGLKPDHYTMT 427
Query: 339 LMLNICANVAS-LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD 397
+L +++ L+L +QIH A K + D+ V ALID Y+++ + +A F +
Sbjct: 428 SVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGR-NN 486
Query: 398 KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWEL 457
++++W ++++GY + GH+ +EL+ M +G +D T ++L C +G ++
Sbjct: 487 FDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQV 546
Query: 458 FTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGAC 513
I L S ++D++ + G + +A + + P W+ ++ C
Sbjct: 547 HAYAIKSGYDLDLWVS-SGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTLISGC 600
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 103/211 (48%), Gaps = 7/211 (3%)
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
CF LR ++ +LM H I+ L L +LI +Y+K GS+ A +++
Sbjct: 49 CF---GFLRDAISTSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFD 105
Query: 292 SMLKTDIISCTALISGFARDDN----HSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
M + D++S ++++ +A+ + KEAF LF+ + + + L ML +C +
Sbjct: 106 KMPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHS 165
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI 407
+ H +A K D V AL+++Y K G++ + F+EM ++V+ W ++
Sbjct: 166 GYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLML 225
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTF 438
Y + G+ EAI+L G+ PN++T
Sbjct: 226 KAYLEMGFKEEAIDLSSAFHTSGLHPNEITL 256
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 160/483 (33%), Positives = 282/483 (58%), Gaps = 3/483 (0%)
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAML-RSGVRANQFTYSSALRACARMRWLQGGRMI 153
+V++W +M+ + + AL ++ ML RS ++FT+ S L+ CA + + G+++
Sbjct: 42 DVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVL 101
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN 213
G + K +L++++ LL++YA CG ++ A LFER+ ++ V W +MI G
Sbjct: 102 HGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCP 161
Query: 214 DDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSL 273
+++ L++ M G PD T+ +++ A +L ++H I ++ ++ L +L
Sbjct: 162 NEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSAL 221
Query: 274 IDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL-KKMGI 332
+++YAK G +++A Q++ + D+ + +ALI G+ ++ N S EA LF+++ M
Sbjct: 222 VNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKN-NRSTEALQLFREVAGGSNMRP 280
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAF 392
++V + +++ CA + L GR +H + + Q + ++ N+LIDM++K G+I A R F
Sbjct: 281 NEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIF 340
Query: 393 DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTC 452
D M K++ISW S++ G A HG G EA+ + M+ + P+++TF+ +L ACSH GL
Sbjct: 341 DSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQ 400
Query: 453 EGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
EG +LF ++ Y + ++EH+ C+VDL R G L A IR M ++P ++W ++LGA
Sbjct: 401 EGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGA 460
Query: 513 CSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNP 572
C +Y N LGE AAR L ++EP Y++LSNIY W+ +K R+LM E+ ++K P
Sbjct: 461 CRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVRELMNEKGIQKTP 520
Query: 573 GYS 575
G S
Sbjct: 521 GCS 523
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 193/376 (51%), Gaps = 7/376 (1%)
Query: 15 QALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIF 74
+ L+ S + PD T+ SLL+ C + ++H ++ S+L++ T ++
Sbjct: 68 EMLERSRNVPDRF----TFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNM 123
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
YA GD+ SAR F+RM RN V WT+MISGY +N ALL++ M G ++ T
Sbjct: 124 YAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTM 183
Query: 135 SSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER 194
++ + ACA ++ L G + I++ + SAL+++YAKCG ++ A +F+++
Sbjct: 184 ATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSD 243
Query: 195 KDVVSWNAMIGGLAMQGFNDDSFWLFRSMM-RQGMKPDCFTLGSILRASVGGIELMKISQ 253
KDV +W+A+I G + ++ LFR + M+P+ T+ +++ A +L
Sbjct: 244 KDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRW 303
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN 313
+HD I + S L SLID+++K G I +A +++ SM D+IS ++++G A
Sbjct: 304 VHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLAL-HG 362
Query: 314 HSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI-HAFAFKYQSSYDAAVG 372
+EA F M + D++ +L C++ + G+++ + Y +
Sbjct: 363 LGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHY 422
Query: 373 NALIDMYAKSGEIADA 388
++D+ ++G +A+A
Sbjct: 423 GCMVDLLCRAGLLAEA 438
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 195/379 (51%), Gaps = 10/379 (2%)
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK-PDCFTLGSILRASV 243
A+ +F DV++WN+M+ + + M+ + PD FT S+L+
Sbjct: 31 AYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90
Query: 244 GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTA 303
+E +H ++K L S + +L+++YA G ++SA L+ M + + T+
Sbjct: 91 LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150
Query: 304 LISGFARDDNH-SKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK 362
+ISG+ + NH EA L+K M D+V + +++ CA + L +G ++H+ +
Sbjct: 151 MISGYMK--NHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIRE 208
Query: 363 YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIEL 422
A +G+AL++MYAK G++ A + FD++ DK+V +W++LI GY K+ EA++L
Sbjct: 209 MDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQL 268
Query: 423 YKKMK-HEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLF 481
++++ M PN+VT L+++ AC+ G E D I + + + ++D+F
Sbjct: 269 FREVAGGSNMRPNEVTILAVISACAQLG-DLETGRWVHDYITRTQKGHSVSLNNSLIDMF 327
Query: 482 ARRGQLESAYNMIRQMNIKPTASLWSAILGACSIY--GNTSLGELAARNLFDMEPEKSVN 539
++ G +++A + M+ K S W++++ +++ G +L + D++P++ +
Sbjct: 328 SKCGDIDAAKRIFDSMSYKDLIS-WNSMVNGLALHGLGREALAQFHLMQTTDLQPDE-IT 385
Query: 540 YVVLSNIYTAAGAWDNARK 558
++ + + AG +K
Sbjct: 386 FIGVLTACSHAGLVQEGKK 404
>gi|449475590|ref|XP_004154496.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 974
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 187/556 (33%), Positives = 307/556 (55%), Gaps = 5/556 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ S+ C +H +I N + SNL ++ ++ YAK G + ARK F
Sbjct: 409 DEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQF 468
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ M + VSW A+I GY Q Y++ A +F M+ +GV ++ + +S + ACA ++ L+
Sbjct: 469 ELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELK 528
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ + K + S+L+D+Y KCG + A +F + ++VVS NA+I G
Sbjct: 529 RGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYT 588
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG-LESSN 267
M G +++ LF+ + G+KP T +L G L QIH ++K G L SS
Sbjct: 589 M-GHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSE 647
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ SL+ +Y + L+ + ++ TALISG+A+ ++H K A ++ M
Sbjct: 648 MVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEK-ALQFYQHMR 706
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ D +L CA ++SL G++IH+ F + D ++LIDMYAK G++
Sbjct: 707 SDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVK 766
Query: 387 DANRAFDEMGDKN-VISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
+ + F EM +N VISW S+I G AK+GY EA+E++K+M+ + ++P++VTFL +L AC
Sbjct: 767 GSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSAC 826
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
SH G EG ++F M+N Y++ PR +H C+VD+ R G L A I ++ K L
Sbjct: 827 SHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPML 886
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
WS +LGAC +G+ G+ AA L +++P+ S +YV+LS+IY + W A R+ M+
Sbjct: 887 WSTLLGACRKHGDEVRGKRAADKLMELKPQSSSSYVLLSSIYAESENWSGAVSLRREMKL 946
Query: 566 RSLRKNPGYSFLQSSK 581
+ ++K PGYS+++ +
Sbjct: 947 KGVKKLPGYSWIEPGR 962
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 179/572 (31%), Positives = 297/572 (51%), Gaps = 52/572 (9%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDP--STYMSLLQFCIDKKAERQAHLIHAHIITNG 60
++ + K G ++A+ F L T L S+ S+L ++HA G
Sbjct: 280 MISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEG 339
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+ N+++ + ++ YAK + +A++ F+ + ERN+V W AM+ G+AQNG + + FS
Sbjct: 340 LDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFS 399
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M R G + ++FT++S ACA + +L G + + K +F NLFV +AL+D+YAK G
Sbjct: 400 CMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSG 459
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+++A FE ++ D VSWNA+I G + +ND++F++FR M+ G+ PD +L SI+
Sbjct: 460 ALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVS 519
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
A EL + Q H L++K+GL++S SLID+Y K G + +A ++ SM +++S
Sbjct: 520 ACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVS 579
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
ALI+G+ H +EA LF+++ + + +V +L+ C LNLGRQIH
Sbjct: 580 VNALIAGYTM--GHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQV 637
Query: 361 FKYQS-SYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHGYGHE 418
K+ S V +L+ +Y S D+ F E+ K ++ WT+LI+GYA+ + +
Sbjct: 638 MKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEK 697
Query: 419 AIELYKKMKHEGMVPNDVTFLSLLFACS----------------HTG-----LTCEGWEL 457
A++ Y+ M+ + ++P+ F S+L AC+ HTG +TC
Sbjct: 698 ALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSS--- 754
Query: 458 FTDMINK----------YRILPRAEHF----SCVVDLFARRGQLESAYNMIRQM---NIK 500
DM K +R +PR + S +V L A+ G E A + +QM +I
Sbjct: 755 LIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGL-AKNGYAEEALEIFKQMEQQSII 813
Query: 501 PTASLWSAILGACSIYGNTSLGELAARNLFDM 532
P + +L ACS G S G R +FD+
Sbjct: 814 PDEVTFLGVLSACSHAGRVSEG----RKVFDL 841
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 148/479 (30%), Positives = 245/479 (51%), Gaps = 37/479 (7%)
Query: 71 VIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
V+ Y +G + ARK F ++P NVV+W MISG+A+ G+ E A+ F + ++G++A
Sbjct: 249 VVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKAT 308
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE 190
+ + S L A A + L G M+ K +N++V SAL+++YAKC ++ A +F
Sbjct: 309 RSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFN 368
Query: 191 RIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMK 250
+ +++V WNAM+GG A G + F M R G +PD FT SI A L
Sbjct: 369 SLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNF 428
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR 310
Q+H ++IK S+ + +L+D+YAK G+++ A + + M D +S A+I G+ +
Sbjct: 429 GGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQ 488
Query: 311 DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA 370
++ ++ EAF +F+ M+ + D+V L +++ CANV L G+Q H K
Sbjct: 489 EE-YNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTC 547
Query: 371 VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG 430
G++LIDMY K G + A F M +NV+S +LIAGY G+ EAI L+++++ G
Sbjct: 548 AGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTM-GHLEEAIHLFQEIQMVG 606
Query: 431 MVPNDVTFLSLLFACS-----------HTGLTCEGWELFTDMI---------NKYRILPR 470
+ P +VTF LL C H + G+ ++M+ N R +
Sbjct: 607 LKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDS 666
Query: 471 AEHFS------------CVVDLFARRGQLESA---YNMIRQMNIKPTASLWSAILGACS 514
FS ++ +A++ E A Y +R NI P + ++++L AC+
Sbjct: 667 ETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACA 725
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/469 (28%), Positives = 229/469 (48%), Gaps = 42/469 (8%)
Query: 44 KAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMI 103
+A A +IH+ + G L ++ Y K G+V A+KAF R+ +++V +W +++
Sbjct: 55 QALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVL 114
Query: 104 SGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFV 163
S Y +G + F M VR N+FT++ L AC+ ++ + GR + + K F
Sbjct: 115 SMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFG 174
Query: 164 ENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM 223
F + L+D+YAKC ++ DA ++F+ D VSW A+I G GF ++ +F M
Sbjct: 175 FRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRM 234
Query: 224 MRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
R G PD TL +++ A Y G +
Sbjct: 235 QRVGHAPDQITLVTVVNA-----------------------------------YVALGRL 259
Query: 284 RSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCL--ML 341
A +L+ + ++++ +ISG A+ ++EA F + LKK G+ L +L
Sbjct: 260 ADARKLFTQIPNPNVVAWNVMISGHAK-RGFAEEAISFFLE--LKKTGLKATRSSLGSVL 316
Query: 342 NICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVI 401
+ A+++ LN G +HA A K + VG+AL++MYAK ++ A + F+ +G++N++
Sbjct: 317 SAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIV 376
Query: 402 SWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM 461
W +++ G+A++G E +E + MK G P++ TF S+ AC+ G +L T M
Sbjct: 377 LWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVM 436
Query: 462 INKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
I K + + +VD++A+ G L+ A M I S W+AI+
Sbjct: 437 I-KNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVS-WNAII 483
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 125/480 (26%), Positives = 227/480 (47%), Gaps = 37/480 (7%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ +L C + +H + G+ +I YAK + AR FD
Sbjct: 144 TFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGA 203
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
+ VSWTA+I+GY ++G+ A+ VF M R G +Q T + + A
Sbjct: 204 LNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNA----------- 252
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
Y G + DA LF +I +VV+WN MI G A +G
Sbjct: 253 ------------------------YVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRG 288
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
F +++ F + + G+K +LGS+L A L S +H K GL+ + +
Sbjct: 289 FAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGS 348
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
+L+++YAK + +A Q++ S+ + +I+ A++ GFA+ + ++E + F M
Sbjct: 349 ALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQ-NGLAQEVMEFFSCMKRHGPQ 407
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
D+ + + CA++ LN G Q+H K + + + V NAL+DMYAKSG + +A +
Sbjct: 408 PDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQ 467
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLT 451
F+ M + +SW ++I GY + Y EA ++++M G++P++V+ S++ AC++
Sbjct: 468 FELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQEL 527
Query: 452 CEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
G + ++ K + S ++D++ + G + +A ++ M + S+ + I G
Sbjct: 528 KRGQQCHCLLV-KVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAG 586
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 161/465 (34%), Positives = 265/465 (56%), Gaps = 7/465 (1%)
Query: 119 FSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
AM R+ + A+ TYS ++ C +Q R++ + + F+ + L+++Y K
Sbjct: 4 MEAMHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVK 63
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
G +++A LF+ + ++VVSW MI + N + M+R+G++P+ +T S+
Sbjct: 64 FGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSV 123
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
LRA G L+ + Q+H I+K+GLES + +LID Y+K G A ++ M+ D+
Sbjct: 124 LRACDG---LLNLRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDL 180
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
+ ++I GFA++ + E L+K M D L +L C +A L LGRQ+H
Sbjct: 181 VVWNSIIGGFAQNSD-GDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHV 239
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEM-GDKNVISWTSLIAGYAKHGYGH 417
KY D + NAL+DMY K G + DAN F M +K+VISW+++IAG A++G+
Sbjct: 240 HVLKYDQ--DLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSA 297
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
+A++L++ MK +G PN +T L +LFACSH GL +GW F M + I P EH+ C+
Sbjct: 298 DALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCI 357
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKS 537
+DL R G+L+ A +I +MN +P A W +LGAC ++ N L AA+ + ++P +
Sbjct: 358 IDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADA 417
Query: 538 VNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
Y++LSNIY + W++ + R+ M R ++K+PG S+++ SK+
Sbjct: 418 GTYILLSNIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQ 462
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 134/389 (34%), Positives = 207/389 (53%), Gaps = 11/389 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY L++ C+ + A +QA L+H H+ +NGYE L +I Y K G + AR F
Sbjct: 15 DAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLF 74
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D MP+RNVVSWT MIS Y+ + + AL MLR GVR N +TYSS LRAC + L
Sbjct: 75 DEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNL- 133
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
R + GSI K ++FV+SAL+D Y+K G DA +F + D+V WN++IGG A
Sbjct: 134 --RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFA 191
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
D++ L++ M R D TL S+LRA G L Q+H ++K +
Sbjct: 192 QNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLI 249
Query: 269 LTGSLIDVYAKYGSIRSAYQLY-RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
L +L+D+Y K GS+ A L+ R M + D+IS + +I+G A+ + S +A LF+ M
Sbjct: 250 LNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQ-NGFSADALKLFEAMKS 308
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN--ALIDMYAKSGEI 385
K + + + +L C++ +N G + + K D + +ID+ ++G++
Sbjct: 309 KGPKPNYITILGVLFACSHAGLVNDG-WYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKL 367
Query: 386 ADANRAFDEMG-DKNVISWTSLIAGYAKH 413
+A + EM + + ++W L+ H
Sbjct: 368 DEAVKLIHEMNHEPDAVTWRILLGACRVH 396
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 5/204 (2%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
D + D ST S+L+ C +H H++ Y+ +L L+ ++ Y K G + A
Sbjct: 210 DFVADQSTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDA 267
Query: 85 RKAFDR-MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
F R M E++V+SW+ MI+G AQNG+ +AL +F AM G + N T L AC+
Sbjct: 268 NLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSH 327
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVK-SALLDLYAKCGWIEDAWILFERIERK-DVVSWN 201
+ G S+++ ++ ++DL + G +++A L + + D V+W
Sbjct: 328 AGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWR 387
Query: 202 AMIGGLAMQGFNDDSFWLFRSMMR 225
++G + D + + + +++
Sbjct: 388 ILLGACRVHKNVDLAIYAAKEILK 411
>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Vitis vinifera]
Length = 829
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 175/530 (33%), Positives = 293/530 (55%), Gaps = 4/530 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H+ ++ GYE N+ + ++ YAK V A + F + RN V+W A+ISGYAQ G
Sbjct: 122 VHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGD 181
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
A + M GV + T++ L + + I K + V +A
Sbjct: 182 RGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNA 241
Query: 172 LLDLYAKCGWIEDAWILFE-RIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
++ Y++CG IEDA +F+ IE +D+V+WN+M+ + +++F LF M G +P
Sbjct: 242 IITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEP 301
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKY--GSIRSAYQ 288
D +T S++ A+ G + +H L+IK GLE ++ SLI +Y K S+ A
Sbjct: 302 DIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALN 361
Query: 289 LYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
++ S+ D +S ++++GF++ S++A F++M + + ID +L C+++A
Sbjct: 362 IFESLENKDHVSWNSILTGFSQS-GLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLA 420
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA 408
+L LG+Q+H K + V ++LI MY+K G I DA ++FD + I+W SLI
Sbjct: 421 TLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIF 480
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
GYA+HG G A++L+ MK + + +TF+++L ACSH GL EGW M + Y I
Sbjct: 481 GYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIP 540
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARN 528
PR EH++C++DL R G+L+ A +I M +P A +W +LGAC G+ L A +
Sbjct: 541 PRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASH 600
Query: 529 LFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
L ++EPE+ YV+LS+++ W+ ++LM+ER ++K PG+S+++
Sbjct: 601 LLELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIE 650
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 135/540 (25%), Positives = 270/540 (50%), Gaps = 24/540 (4%)
Query: 48 QAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYA 107
+A + H I +G ++++ + +I YAK G++ A K F +R+ VSW MI+G+
Sbjct: 17 RASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFV 76
Query: 108 QNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLF 167
G E AL +M R G + +++ S L+ A + +++ G+ + + K + N+F
Sbjct: 77 NLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVF 136
Query: 168 VKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
SALLD+YAKC +EDA+ +F+ I ++ V+WNA+I G A G +FWL M +G
Sbjct: 137 AGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEG 196
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
++ D T +L +Q+H I+K GL S + ++I Y++ GSI A
Sbjct: 197 VEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAE 256
Query: 288 QLYRSMLKT-DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICAN 346
+++ ++T D+++ ++++ + +N +EAF LF +M + D +++
Sbjct: 257 RVFDGAIETRDLVTWNSMLAAYLV-NNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFE 315
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK--SGEIADANRAFDEMGDKNVISWT 404
+ G+ +H K + + N+LI MY K S + +A F+ + +K+ +SW
Sbjct: 316 GSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWN 375
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK 464
S++ G+++ G +A++ ++ M+ + +V + F ++L +CS G ++ ++ K
Sbjct: 376 SILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHV-LVLK 434
Query: 465 YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGEL 524
P S ++ ++++ G +E A K ++ W++++ + +G G++
Sbjct: 435 SGFEPNGFVASSLIFMYSKCGVIEDARKSF-DATPKDSSIAWNSLIFGYAQHGR---GKI 490
Query: 525 AARNLFDMEPEK-SVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKN 583
A F M+ + ++++ + TA L+EE G+SFL+S + +
Sbjct: 491 ALDLFFLMKDRRVKLDHITFVAVLTAC-------SHIGLVEE-------GWSFLKSMESD 536
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 94/191 (49%), Gaps = 1/191 (0%)
Query: 248 LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG 307
L + S H L IK G +S ++I YAK G IR A +++ + D +S +I+G
Sbjct: 15 LYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAG 74
Query: 308 FARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSY 367
F N + A + K M +D +L A V + +G+Q+H+ K
Sbjct: 75 FVNLGNF-ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEG 133
Query: 368 DAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMK 427
+ G+AL+DMYAK + DA F + +N ++W +LI+GYA+ G A L M+
Sbjct: 134 NVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCME 193
Query: 428 HEGMVPNDVTF 438
EG+ +D TF
Sbjct: 194 LEGVEIDDGTF 204
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 105/202 (51%), Gaps = 4/202 (1%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
++G + ALKF ++ ++D + ++L+ C D + +H ++ +G+E N
Sbjct: 383 QSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGF 442
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+++ +I Y+K G + ARK+FD P+ + ++W ++I GYAQ+G + AL +F M
Sbjct: 443 VASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRR 502
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA-LLDLYAKCGWIEDA 185
V+ + T+ + L AC+ + ++ G S++ + A ++DL + G +++A
Sbjct: 503 VKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEA 562
Query: 186 WILFERIE-RKDVVSWNAMIGG 206
L E + D + W ++G
Sbjct: 563 KALIEAMPFEPDAMVWKTLLGA 584
>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
Length = 1866
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 191/556 (34%), Positives = 303/556 (54%), Gaps = 10/556 (1%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L P T ++ L C + + A IH+ +IT S L ++ YAK G V
Sbjct: 26 FLHPLTSLNSLLNC--SRTSKHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLL 83
Query: 87 AFDRMPE--RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
F P+ +NVVSWT++I+ + AL F+ M RSGV N +T+S+ L AC
Sbjct: 84 LFSSAPDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDT 143
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
G + + K F+ +FV SAL+D+YAKC + A +FE + +++VSWN MI
Sbjct: 144 TASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMI 203
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKP-DCFTLGSILRA--SVGGIELMKISQIHDLIIKL 261
G D + + F++++ + + D + S+ A + G +E K Q+H + +KL
Sbjct: 204 VGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFGK--QVHGVALKL 261
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDL 321
G+ + + SL D+Y K G +L+ + D+++ +I + + N+ ++A +
Sbjct: 262 GVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNY-EDACNS 320
Query: 322 FKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
F M K D+ +L+ CAN+A+L G IH + + V ++LI MYAK
Sbjct: 321 FWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAK 380
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
G + DA + F+E D+NV+ WT++IA +HG+ + +EL+++M EG+ P+ +TF+S+
Sbjct: 381 CGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSV 440
Query: 442 LFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
L ACSHTG EG+ F MI + I P EH++C+VDL +R G+L+ A I M IKP
Sbjct: 441 LSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKP 500
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRK 561
AS+W A+L AC + N +G+ A LFD+EP+ NYV+L NI T G + A + R+
Sbjct: 501 DASVWGALLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVLLCNILTRNGMLNEADEVRR 560
Query: 562 LMEERSLRKNPGYSFL 577
ME +RK PG S++
Sbjct: 561 KMESIGVRKEPGCSWI 576
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 136/285 (47%), Gaps = 4/285 (1%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
T LD ++ S+ C + +H + G + ++++ + Y K G
Sbjct: 228 TALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVA 287
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
K F R+VV+W MI Y N E+A F M R G ++ +YSS L +CA +
Sbjct: 288 KLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLA 347
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
L G +I I + FV+NL V S+L+ +YAKCG + DA+ +FE E ++VV W A+I
Sbjct: 348 ALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIA 407
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGL 263
G + LF M+R+G+KPD T S+L A G +E + +I G+
Sbjct: 408 ACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVE-EGFFYFNSMIKVHGI 466
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALISG 307
++ ++D+ ++ G + A + M +K D AL+S
Sbjct: 467 YPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSA 511
>gi|110741296|dbj|BAF02198.1| hypothetical protein [Arabidopsis thaliana]
Length = 727
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 194/593 (32%), Positives = 320/593 (53%), Gaps = 24/593 (4%)
Query: 4 VRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGY-- 61
+R ++G +++A+ S P L Y +L Q C +++ +H H++++ Y
Sbjct: 33 LRTLVRSGDIRRAVSLFYSAPVELQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCY 92
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSA 121
N+ L+ +I YAK G++L AR+ FD MPERNVVSWTA+I+GY Q G ++ +FS+
Sbjct: 93 SQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSS 152
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC-- 179
ML S N+FT SS L +C R+ + G+ + G K +++V +A++ +Y +C
Sbjct: 153 ML-SHCFPNEFTLSSVLTSC---RY-EPGKQVHGLALKLGLHCSIYVANAVISMYGRCHD 207
Query: 180 -GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
+AW +FE I+ K++V+WN+MI + +F M G+ D TL +I
Sbjct: 208 GAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNI 267
Query: 239 LRASVGGIELM--KIS----QIHDLIIKLGLESSNKLTGSLIDVYAK-YGSIRSAYQLYR 291
+ +L+ ++S Q+H L +K GL + ++ +LI VY++ Y+L+
Sbjct: 268 CSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFM 327
Query: 292 SMLKT-DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
M DI++ +I+ FA D + A LF + +K+ D +L CA + +
Sbjct: 328 EMSHCRDIVAWNGIITAFAVYD--PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTA 385
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
IHA K D + N+LI YAK G + R FD+M ++V+SW S++ Y
Sbjct: 386 RHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAY 445
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
+ HG + +++KM + P+ TF++LL ACSH G EG +F M K LP+
Sbjct: 446 SLHGQVDSILPVFQKMD---INPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQ 502
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
H++CV+D+ +R + A +I+QM + P A +W A+LG+C +GNT LG+LAA L
Sbjct: 503 LNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLK 562
Query: 531 DM-EPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
++ EP S++Y+ +SNIY A G+++ A + K ME +RK P S+ + K
Sbjct: 563 ELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNK 615
>gi|357472867|ref|XP_003606718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507773|gb|AES88915.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 183/554 (33%), Positives = 300/554 (54%), Gaps = 35/554 (6%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
+P +Y L++ ++ +Q +HA + TNGY +++ +I Y G + ARK F
Sbjct: 28 EPESYAKLIETYTHSRSLQQGKKLHALLTTNGYVRFNLIASNLITLYTTCGQLSIARKLF 87
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAM--LRSGVRANQFTYSSALRACARMRW 146
D++P+ N+ W A+I+ A+ G+ ++AL VFS M L + F S L+AC +
Sbjct: 88 DKIPQTNIHRWIALIATCARCGFHDHALEVFSEMQTLNDQKSNSVFVIPSVLKACGHVGD 147
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
G + + K F + FV SAL+ +Y+KCG + DA +F+ + KD+V+ NA++ G
Sbjct: 148 RIYGEQVHCLVLKCSFEIDAFVSSALIVMYSKCGEVRDARKVFDGMVVKDLVAMNAVVSG 207
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
A QG +++ L +M G+ P+ T +++ + +S+I L
Sbjct: 208 YAQQGLPNEALSLVENMKLMGVNPNVVTWNALISGFAQKCDREMVSEIFRL--------- 258
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ ++ D++S T+++SGF ++ ++EAFD FK M+
Sbjct: 259 ----------------------MNEDRVEPDVVSWTSVLSGFVQN-FRNEEAFDAFKKML 295
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
L + +L CA A + G++IH +A D V +AL+DMYAK G I+
Sbjct: 296 LLGFCPTSATISALLPACATEARVRFGKEIHGYALVIGVEDDLYVRSALVDMYAKCGFIS 355
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND-VTFLSLLFAC 445
+A F +M +KN ++ S+I GYA HG EAIEL+ +M+ EG+ D +TF + L AC
Sbjct: 356 EARTLFYKMPEKNTVTMNSMIFGYANHGCCEEAIELFNQMEMEGVPKLDHLTFTAALTAC 415
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
SH G G LF M KY I PR EH++C+VDLF R G+LE AY +I+ M +KP +
Sbjct: 416 SHVGDIELGQRLFKIMQEKYCIEPRLEHYACMVDLFGRAGKLEEAYGIIKSMPVKPDLFV 475
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
W A+L AC +G+ L E+AA++L ++EPE + N ++LS++Y AG W + ++ +++
Sbjct: 476 WGALLAACRNHGHVELAEVAAKHLSELEPESAGNRLLLSSLYADAGTWGKVERIKRRIKK 535
Query: 566 RSLRKNPGYSFLQS 579
LRK G S++ +
Sbjct: 536 GKLRKLQGLSWIDN 549
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 205/455 (45%), Gaps = 60/455 (13%)
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
+R+ +Y+ + R LQ G+ + + +V + S L+ LY CG + A
Sbjct: 25 LRSEPESYAKLIETYTHSRSLQQGKKLHALLTTNGYVRFNLIASNLITLYTTCGQLSIAR 84
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM--MRQGMKPDCFTLGSILRASVG 244
LF++I + ++ W A+I A GF+D + +F M + F + S+L+A
Sbjct: 85 KLFDKIPQTNIHRWIALIATCARCGFHDHALEVFSEMQTLNDQKSNSVFVIPSVLKACGH 144
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
+ + Q+H L++K E ++ +LI +Y+K G +R A +++ M+ D+++ A+
Sbjct: 145 VGDRIYGEQVHCLVLKCSFEIDAFVSSALIVMYSKCGEVRDARKVFDGMVVKDLVAMNAV 204
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
+SG+A+ EA L ++M K MG++ NV +
Sbjct: 205 VSGYAQ-QGLPNEALSLVENM--KLMGVN-----------PNVVTW-------------- 236
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMG----DKNVISWTSLIAGYAKHGYGHEAI 420
NALI +A+ + + F M + +V+SWTS+++G+ ++ EA
Sbjct: 237 --------NALISGFAQKCDREMVSEIFRLMNEDRVEPDVVSWTSVLSGFVQNFRNEEAF 288
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEH----FSC 476
+ +KKM G P T +LL AC+ E F I+ Y ++ E S
Sbjct: 289 DAFKKMLLLGFCPTSATISALLPACA-----TEARVRFGKEIHGYALVIGVEDDLYVRSA 343
Query: 477 VVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAAR--NLFDMEP 534
+VD++A+ G + A + +M K T ++ S I G Y N E A N +ME
Sbjct: 344 LVDMYAKCGFISEARTLFYKMPEKNTVTMNSMIFG----YANHGCCEEAIELFNQMEMEG 399
Query: 535 EKSVNYVVLSNIYTA---AGAWDNARKTRKLMEER 566
++++ + TA G + ++ K+M+E+
Sbjct: 400 VPKLDHLTFTAALTACSHVGDIELGQRLFKIMQEK 434
>gi|449447569|ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Cucumis sativus]
gi|449481506|ref|XP_004156203.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Cucumis sativus]
Length = 712
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 182/580 (31%), Positives = 311/580 (53%), Gaps = 41/580 (7%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
LL C + +H HII++G + L +K+++FY+ + + A +
Sbjct: 85 LLVSCTKSSSLPPGKQLHGHIISSGLVEDSFLVSKLVMFYSSLEFLPEAHTLVETSNLFR 144
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG 155
SW +I+ Y ++ E A+L + M+ GVR + FT+ S L+AC + L+ G +
Sbjct: 145 PCSWNILITSYVKHKLYEAAILAYKQMVSKGVRPDNFTFPSILKACGETQNLKFGLEVHK 204
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD 215
SI +LFV +AL+ +Y +CG ++ A LF+ + +D VSWN+MI + +G +
Sbjct: 205 SINSWSTPWSLFVHNALISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYSSRGMWRE 264
Query: 216 SFWLFRSMMRQGMKPD----------CFTLGSILRA------------------------ 241
+F LF SM + ++ + C +G+ +A
Sbjct: 265 AFELFESMQSKCLEINVVTWNIIAGGCLRVGNFTQALKLLSQMRNFGIHLDDVAMIIGLG 324
Query: 242 ---SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
+G I L K +IH I+ + + +L+ +YA+ IR AY L+R
Sbjct: 325 ACSHIGAIRLGK--EIHGFTIRHYHHMLSTVQNALVTMYARCKDIRHAYMLFRLNDDKSR 382
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
I+ +++SG +EA LF++++L + D V +L +CA VA L GR+ H
Sbjct: 383 ITWNSMLSGLTHL-GRVEEALCLFRELLLFGVEPDYVTFASILPLCARVADLQHGREFHC 441
Query: 359 FAFKYQSSYDAAV-GNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
+ K++ D + NAL+DMYA++G++++A R F + K+ +++TSLIAGY G G
Sbjct: 442 YITKHRDFRDHLLLWNALVDMYARAGKVSEAKRIFYSLSKKDEVTYTSLIAGYGMQGEGG 501
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
+A+ L+++MK + P+ +T +++L ACSH+GL + LF +M + + + PR EH++C+
Sbjct: 502 KAVRLFEEMKRFQIKPDHITMIAVLSACSHSGLVNQAELLFAEMQSVHGLSPRLEHYACM 561
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKS 537
DLF R G L A +I +M +PT+++W+ ++GAC I+GN +GE AA L +M PE S
Sbjct: 562 ADLFGRVGLLNKAKEIITRMPYRPTSAIWATLIGACCIHGNMDIGEWAAEKLLEMRPEHS 621
Query: 538 VNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
YV+++N+Y AAG+W + R LM + + K PG S++
Sbjct: 622 GYYVLIANMYAAAGSWSKLAEIRTLMRDSGVAKIPGCSWV 661
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 202/445 (45%), Gaps = 48/445 (10%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ S+L+ C + + + +H I + +L + +I Y + G+V +AR F
Sbjct: 179 DNFTFPSILKACGETQNLKFGLEVHKSINSWSTPWSLFVHNALISMYGRCGEVDTARNLF 238
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFT-------------YS 135
D M ER+ VSW +MIS Y+ G A +F +M + N T ++
Sbjct: 239 DNMLERDAVSWNSMISCYSSRGMWREAFELFESMQSKCLEINVVTWNIIAGGCLRVGNFT 298
Query: 136 SALRACARMR----WLQGGRMI--------QGSIQKGRFVENL----------FVKSALL 173
AL+ ++MR L MI G+I+ G+ + V++AL+
Sbjct: 299 QALKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKEIHGFTIRHYHHMLSTVQNALV 358
Query: 174 DLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCF 233
+YA+C I A++LF + K ++WN+M+ GL G +++ LFR ++ G++PD
Sbjct: 359 TMYARCKDIRHAYMLFRLNDDKSRITWNSMLSGLTHLGRVEEALCLFRELLLFGVEPDYV 418
Query: 234 TLGSILRASVGGIELMKISQIHDLIIK-LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRS 292
T SIL +L + H I K L +L+D+YA+ G + A +++ S
Sbjct: 419 TFASILPLCARVADLQHGREFHCYITKHRDFRDHLLLWNALVDMYARAGKVSEAKRIFYS 478
Query: 293 MLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNL 352
+ K D ++ T+LI+G+ K A LF++M ++ D + + +L+ C++ +N
Sbjct: 479 LSKKDEVTYTSLIAGYGMQGEGGK-AVRLFEEMKRFQIKPDHITMIAVLSACSHSGLVNQ 537
Query: 353 GRQIHAFAFKYQSSYDAAVG----NALIDMYAKSGEIADANRAFDEMGDKNVIS-WTSLI 407
+ A + QS + + + D++ + G + A M + + W +LI
Sbjct: 538 AELLFA---EMQSVHGLSPRLEHYACMADLFGRVGLLNKAKEIITRMPYRPTSAIWATLI 594
Query: 408 AGYAKHG---YGHEAIELYKKMKHE 429
HG G A E +M+ E
Sbjct: 595 GACCIHGNMDIGEWAAEKLLEMRPE 619
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 138/296 (46%), Gaps = 16/296 (5%)
Query: 8 FKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNL 65
+ G QALK + LD + L C A R IH I + +
Sbjct: 292 LRVGNFTQALKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKEIHGFTIRHYHHMLS 351
Query: 66 HLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
+ ++ YA+ D+ A F +++ ++W +M+SG G E AL +F +L
Sbjct: 352 TVQNALVTMYARCKDIRHAYMLFRLNDDKSRITWNSMLSGLTHLGRVEEALCLFRELLLF 411
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGR-FVENLFVKSALLDLYAKCGWIED 184
GV + T++S L CAR+ LQ GR I K R F ++L + +AL+D+YA+ G + +
Sbjct: 412 GVEPDYVTFASILPLCARVADLQHGREFHCYITKHRDFRDHLLLWNALVDMYARAGKVSE 471
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS-- 242
A +F + +KD V++ ++I G MQG + LF M R +KPD T+ ++L A
Sbjct: 472 AKRIFYSLSKKDEVTYTSLIAGYGMQGEGGKAVRLFEEMKRFQIKPDHITMIAVLSACSH 531
Query: 243 ---VGGIELM--KISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
V EL+ ++ +H GL + + D++ + G + A ++ M
Sbjct: 532 SGLVNQAELLFAEMQSVH------GLSPRLEHYACMADLFGRVGLLNKAKEIITRM 581
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 18/212 (8%)
Query: 315 SKEAFDLFK---------DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS 365
S EAF L + D+IL+ + I +L C +SL G+Q+H
Sbjct: 58 SFEAFSLIQLRTSYNDSFDLILQSISI-------LLVSCTKSSSLPPGKQLHGHIISSGL 110
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKK 425
D+ + + L+ Y+ + +A+ + SW LI Y KH AI YK+
Sbjct: 111 VEDSFLVSKLVMFYSSLEFLPEAHTLVETSNLFRPCSWNILITSYVKHKLYEAAILAYKQ 170
Query: 426 MKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRG 485
M +G+ P++ TF S+L AC T G E+ IN + + ++ ++ R G
Sbjct: 171 MVSKGVRPDNFTFPSILKACGETQNLKFGLEVHKS-INSWSTPWSLFVHNALISMYGRCG 229
Query: 486 QLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
++++A N+ M ++ A W++++ S G
Sbjct: 230 EVDTARNLFDNM-LERDAVSWNSMISCYSSRG 260
>gi|357490167|ref|XP_003615371.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355516706|gb|AES98329.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 765
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 191/583 (32%), Positives = 309/583 (53%), Gaps = 28/583 (4%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D S Y LLQ C++ + +IH HI+ G + LS+ ++ YAK G + A++
Sbjct: 71 VDSSFYPPLLQQCLENCSFSSTQIIHCHIVKTGSHEDPFLSSFLVTVYAKCGRMECAQQV 130
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML-RSGVRANQFTYSSALRACARMRW 146
FD M RN V+WT ++ GY QN ++A+ +F ML S + +T + AL AC +
Sbjct: 131 FDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYPSNYTLAIALNACTSLHS 190
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW-IEDAWILFERIERKDVVSWNAMIG 205
L+ G + I K + + +AL LY KCG +E F RI+ KDV+SW A I
Sbjct: 191 LKLGEQLHAYIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLTAFRRIKEKDVISWTAAIS 250
Query: 206 GLAMQGFNDDSFWLFRSMM--RQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKL 261
+G +F M+ ++P+ +TL S L V +EL Q+H L KL
Sbjct: 251 ACGEKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVKCLELG--IQVHALCTKL 308
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR-----DDNHSK 316
G ES+ ++ SL+ +Y K G I A +L++ M ++++ A+I+G A+ DN S
Sbjct: 309 GYESNLRVRNSLLYLYLKCGCIVEAQRLFKGMNDVNLVTWNAMIAGHAQMMELSKDNLSA 368
Query: 317 -----EAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAV 371
EA +LF + M D +L++C+ + +L G QIHA K D V
Sbjct: 369 YQKGIEALNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHARTIKTGFLSDVVV 428
Query: 372 GNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGM 431
G+++I+MY K G I A++ F EM + +I WT++I G+A+HG+ +A+ L++ MK G+
Sbjct: 429 GSSMINMYNKCGSIERASKVFLEMSIRTMILWTTMITGFAQHGWSKQALNLFEDMKLVGI 488
Query: 432 VPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAY 491
PN VTF+ +L AC G+ E + F M +Y+I P +H+ C+VD+ R GQ++ A+
Sbjct: 489 RPNLVTFVGVLSACGSAGMVNEAFNYFEIMQKEYKIKPVMDHYVCLVDMLVRLGQVQEAF 548
Query: 492 NMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAG 551
++I++M+ K + +WS ++ C GN LG AA L ++P+ + Y +L N Y +AG
Sbjct: 549 DLIKKMDYKASEFIWSNLIVGCLSQGNLELGCDAAEKLLSLKPKDTETYKLLLNAYVSAG 608
Query: 552 AWDNARKTRKLMEERSLR----------KNPGYSFLQSSKKNI 584
+D+ + +M E + K+ YSF + K +I
Sbjct: 609 RYDDVSRVENIMREEKIGELKDWSWISIKDRVYSFQTNDKADI 651
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 204/451 (45%), Gaps = 24/451 (5%)
Query: 119 FSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
FS S + Y L+ C ++I I K E+ F+ S L+ +YAK
Sbjct: 61 FSLAKESNEEVDSSFYPPLLQQCLENCSFSSTQIIHCHIVKTGSHEDPFLSSFLVTVYAK 120
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG-MKPDCFTLGS 237
CG +E A +F+ + R++ V+W ++ G + LF M+ P +TL
Sbjct: 121 CGRMECAQQVFDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYPSNYTLAI 180
Query: 238 ILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKY-GSIRSAYQLYRSMLKT 296
L A L Q+H IIK ++ + +L +Y K G + +R + +
Sbjct: 181 ALNACTSLHSLKLGEQLHAYIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLTAFRRIKEK 240
Query: 297 DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI--DDVILCLMLNICANVASLNLGR 354
D+IS TA IS + + + +F +M+L ++ + ++ L L+ C V L LG
Sbjct: 241 DVISWTAAISACG-EKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVKCLELGI 299
Query: 355 QIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAK-- 412
Q+HA K + V N+L+ +Y K G I +A R F M D N+++W ++IAG+A+
Sbjct: 300 QVHALCTKLGYESNLRVRNSLLYLYLKCGCIVEAQRLFKGMNDVNLVTWNAMIAGHAQMM 359
Query: 413 ---------HGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMIN 463
+ G EA+ L+ K+ GM P+ TF S+L CS +G ++ I
Sbjct: 360 ELSKDNLSAYQKGIEALNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHARTI- 418
Query: 464 KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG--NTSL 521
K L S +++++ + G +E A + +M+I+ T LW+ ++ + +G +L
Sbjct: 419 KTGFLSDVVVGSSMINMYNKCGSIERASKVFLEMSIR-TMILWTTMITGFAQHGWSKQAL 477
Query: 522 GELAARNLFDMEPEKSVNYVVLSNIYTAAGA 552
L + P N V + +A G+
Sbjct: 478 NLFEDMKLVGIRP----NLVTFVGVLSACGS 504
>gi|356528513|ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 651
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 185/562 (32%), Positives = 301/562 (53%), Gaps = 6/562 (1%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
ST+ +L+ C R + +IHAH++ + ++SN+ + T + Y K G + A F
Sbjct: 54 STFPFVLKACAKLSHLRNSQIIHAHVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVE 113
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG- 149
MP R++ SW AM+ G+AQ+G+ + + M SG+R + T + + R++ L
Sbjct: 114 MPVRDIASWNAMLLGFAQSGFLDRLSCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSL 173
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER--KDVVSWNAMIGGL 207
G + I+ G ++ + V + L+ Y+KCG + A LF+ I + VVSWN+MI
Sbjct: 174 GAVYSFGIRIGVHMD-VSVANTLIAAYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAY 232
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A + + ++ M+ G PD T+ ++L + + L +H +KLG +S
Sbjct: 233 ANFEKHVKAVNCYKGMLDGGFSPDISTILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDV 292
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ +LI +Y+K G + SA L+ M +S T +IS +A + + EA LF M
Sbjct: 293 CVVNTLICMYSKCGDVHSARFLFNGMSDKTCVSWTVMISAYA-EKGYMSEAMTLFNAMEA 351
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
D V + +++ C +L LG+ I ++ + V NALIDMYAK G D
Sbjct: 352 AGEKPDLVTVLALISGCGQTGALELGKWIDNYSINNGLKDNVVVCNALIDMYAKCGGFND 411
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A F M ++ V+SWT++I A +G +A+EL+ M GM PN +TFL++L AC+H
Sbjct: 412 AKELFYTMANRTVVSWTTMITACALNGDVKDALELFFMMLEMGMKPNHITFLAVLQACAH 471
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
GL G E F M KY I P +H+SC+VDL R+G L A +I+ M +P + +WS
Sbjct: 472 GGLVERGLECFNMMTQKYGINPGIDHYSCMVDLLGRKGHLREALEIIKSMPFEPDSGIWS 531
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
A+L AC ++G +G+ + LF++EP+ +V YV ++NIY +A W+ R+ M+
Sbjct: 532 ALLSACKLHGKMEMGKYVSEQLFELEPQVAVPYVEMANIYASAEMWEGVAAIRRNMKYLQ 591
Query: 568 LRKNPGYSFLQ-SSKKNILLLE 588
+RK+PG S +Q + K I +E
Sbjct: 592 VRKSPGQSIIQVNGKPTIFTVE 613
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 132/434 (30%), Positives = 221/434 (50%), Gaps = 25/434 (5%)
Query: 98 SWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSI 157
+W + G+ +NAL++F M +SG+ N T+ L+ACA++ L+ ++I +
Sbjct: 20 TWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIHAHV 79
Query: 158 QKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSF 217
K F N+FV++A +D+Y KCG +EDA +F + +D+ SWNAM+ G A GF D
Sbjct: 80 LKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLDRLS 139
Query: 218 WLFRSMMRQGMKPDCFT----LGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSL 273
L R M G++PD T + SILR L + ++ I++G+ + +L
Sbjct: 140 CLLRHMRLSGIRPDAVTVLLLIDSILRVK----SLTSLGAVYSFGIRIGVHMDVSVANTL 195
Query: 274 IDVYAKYGSIRSAYQLY---RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
I Y+K G++ SA L+ S L++ ++S ++I+ +A + H K A + +K M+
Sbjct: 196 IAAYSKCGNLCSAETLFDEINSGLRS-VVSWNSMIAAYANFEKHVK-AVNCYKGMLDGGF 253
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
D + +L+ C +L G +H+ K D V N LI MY+K G++ A
Sbjct: 254 SPDISTILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARF 313
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG- 449
F+ M DK +SWT +I+ YA+ GY EA+ L+ M+ G P+ VT L+L+ C TG
Sbjct: 314 LFNGMSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGA 373
Query: 450 LTCEGWELFTDMINKYRI----LPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
L W I+ Y I + ++D++A+ G A + M + S
Sbjct: 374 LELGKW------IDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKELFYTMANRTVVS- 426
Query: 506 WSAILGACSIYGNT 519
W+ ++ AC++ G+
Sbjct: 427 WTTMITACALNGDV 440
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 145/267 (54%), Gaps = 3/267 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D ST ++LL C+ KA L+H+H + G +S++ + +I Y+K GDV SAR F
Sbjct: 256 DISTILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLF 315
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ M ++ VSWT MIS YA+ GY A+ +F+AM +G + + T + + C + L+
Sbjct: 316 NGMSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALE 375
Query: 149 GGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ I SI G +N+ V +AL+D+YAKCG DA LF + + VVSW MI
Sbjct: 376 LGKWIDNYSINNG-LKDNVVVCNALIDMYAKCGGFNDAKELFYTMANRTVVSWTTMITAC 434
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV-GGIELMKISQIHDLIIKLGLESS 266
A+ G D+ LF M+ GMKP+ T ++L+A GG+ + + + K G+
Sbjct: 435 ALNGDVKDALELFFMMLEMGMKPNHITFLAVLQACAHGGLVERGLECFNMMTQKYGINPG 494
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSM 293
++D+ + G +R A ++ +SM
Sbjct: 495 IDHYSCMVDLLGRKGHLREALEIIKSM 521
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 185/392 (47%), Gaps = 9/392 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T + L+ + K+ +++ I G ++ ++ +I Y+K G++ SA F
Sbjct: 153 DAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLIAAYSKCGNLCSAETLF 212
Query: 89 DRMPE--RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
D + R+VVSW +MI+ YA A+ + ML G + T + L +C + +
Sbjct: 213 DEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPDISTILNLLSSCMQPKA 272
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
L G ++ K ++ V + L+ +Y+KCG + A LF + K VSW MI
Sbjct: 273 LFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFNGMSDKTCVSWTVMISA 332
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLE 264
A +G+ ++ LF +M G KPD T+ +++ G +EL K I + I GL+
Sbjct: 333 YAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALELGK--WIDNYSINNGLK 390
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ + +LID+YAK G A +L+ +M ++S T +I+ A + + K+A +LF
Sbjct: 391 DNVVVCNALIDMYAKCGGFNDAKELFYTMANRTVVSWTTMITACALNGD-VKDALELFFM 449
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQ-IHAFAFKYQSSYDAAVGNALIDMYAKSG 383
M+ M + + +L CA+ + G + + KY + + ++D+ + G
Sbjct: 450 MLEMGMKPNHITFLAVLQACAHGGLVERGLECFNMMTQKYGINPGIDHYSCMVDLLGRKG 509
Query: 384 EIADANRAFDEMG-DKNVISWTSLIAGYAKHG 414
+ +A M + + W++L++ HG
Sbjct: 510 HLREALEIIKSMPFEPDSGIWSALLSACKLHG 541
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 12/117 (10%)
Query: 399 NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELF 458
+ +W S G+ A+ L+++MK G+ PN+ TF +L AC+ L
Sbjct: 17 TLFTWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLS------HLR 70
Query: 459 TDMINKYRILP---RAEHF--SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
I +L ++ F + VD++ + G+LE A+N+ +M ++ AS W+A+L
Sbjct: 71 NSQIIHAHVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIAS-WNAML 126
>gi|224121748|ref|XP_002330643.1| predicted protein [Populus trichocarpa]
gi|222872247|gb|EEF09378.1| predicted protein [Populus trichocarpa]
Length = 777
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 186/522 (35%), Positives = 298/522 (57%), Gaps = 14/522 (2%)
Query: 28 LDPSTYMSLLQFCID----KKAERQAHLIHAHIITNGY-ESNLHLSTKVIIFYAKVGDVL 82
++ +Y+ LL C + + R+ +H + I G ++ + + +I YAK GD+
Sbjct: 249 INVDSYVILLSACAEFALLDEGRRKGREVHGYAIRTGLNDAKVAVGNGLINMYAKCGDID 308
Query: 83 SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA 142
AR F M +++ VSW +MI+G QN E+A+ +++M ++G+ + FT SAL +CA
Sbjct: 309 HARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFTLISALSSCA 368
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
+ + G+ G K ++ V + LL LYA+ G + + +F + +D VSWN
Sbjct: 369 SLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETGHLAECQKVFSWMLERDQVSWNT 428
Query: 203 MIGGLAMQGFN-DDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS-QIHDLIIK 260
+IG LA G + ++ +F MMR G P+ T ++L A+V + K+S QIH LI+K
Sbjct: 429 VIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLL-ATVSSLSTSKLSHQIHALILK 487
Query: 261 LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML-KTDIISCTALISGFARDDNHSKEAF 319
++ N + +L+ Y K G + + +++ M + D +S ++ISG+ +D K A
Sbjct: 488 YNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNDLLCK-AM 546
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMY 379
DL M+ + +D +L+ CA VA+L G ++HA A + D +G+AL+DMY
Sbjct: 547 DLVWLMMQRGQRLDCFTFATVLSACATVATLERGMEVHACAIRACLESDVVIGSALVDMY 606
Query: 380 AKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFL 439
+K G I A+R F+ M +N+ SW S+I+GYA+HGYG A+ L+ +MK G +P+ +TF+
Sbjct: 607 SKCGRIDYASRFFNLMPMRNLYSWNSMISGYARHGYGDNALRLFTRMKLSGQLPDHITFV 666
Query: 440 SLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
+L ACSH GL EG+E F M Y ++PR EH+SC+VDL R G+L+ N I +M I
Sbjct: 667 GVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIDNFINKMPI 726
Query: 500 KPTASLWSAILGACSIYGN---TSLGELAARNLFDMEPEKSV 538
KP +W +LGAC GN T LG AA LF+M+P+ +V
Sbjct: 727 KPNILIWRTVLGACC-RGNGRKTELGRRAAEMLFNMDPQNAV 767
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 138/487 (28%), Positives = 244/487 (50%), Gaps = 21/487 (4%)
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC--ARMRWLQ 148
MP+RN V+W +ISGY QNG ++A V M+ G N+F + SA+RAC + + LQ
Sbjct: 1 MPDRNGVTWACLISGYTQNGMPDDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLCGLQ 60
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAK-CGWIEDAWILFERIERKDVVSWNAMIGGL 207
G I G I K + + + + L+ +Y K G+I+ A +F+ IE ++ + WN+++
Sbjct: 61 LGMQIHGLILKSPYANDASLCNVLISMYGKYLGYIDYARSVFDEIEIRNSIYWNSIVSVY 120
Query: 208 AMQGFNDDSFWLFRSMMRQ----GMKPDCFTLGSILRASVGGIE--LMKISQIHDLIIKL 261
+ +G F LF SM +KP+ +T GS++ A+ ++ L + QI I K
Sbjct: 121 SQRGDAASCFELFSSMQMADSGLSLKPNEYTFGSLITAACSSVDSGLSLLGQILARIKKS 180
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDL 321
GL ++ + +L +++ GS A +++ M + +S L+ G R +EA ++
Sbjct: 181 GLLANLYVGSALAGGFSRLGSFDYARKIFEQMTARNAVSMNGLMVGLVR-QKCGEEAVEV 239
Query: 322 FKDMI-LKKMGIDDVILCLMLNICANVASLN----LGRQIHAFAFKYQ-SSYDAAVGNAL 375
FK+ L + +D + ++L+ CA A L+ GR++H +A + + AVGN L
Sbjct: 240 FKETRHLVDINVDSYV--ILLSACAEFALLDEGRRKGREVHGYAIRTGLNDAKVAVGNGL 297
Query: 376 IDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND 435
I+MYAK G+I A F M DK+ +SW S+I G ++ +A++ Y M+ G++P++
Sbjct: 298 INMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSN 357
Query: 436 VTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIR 495
T +S L +C+ G G + + I K + + ++ L+A G L +
Sbjct: 358 FTLISALSSCASLGCILLGQQTHGEGI-KLGLDMDVSVSNTLLALYAETGHLAECQKVFS 416
Query: 496 QMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDN 555
M + S W+ ++GA + G S+ E L M S N V N+ +
Sbjct: 417 WMLERDQVS-WNTVIGALADSG-ASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLST 474
Query: 556 ARKTRKL 562
++ + ++
Sbjct: 475 SKLSHQI 481
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 140/464 (30%), Positives = 234/464 (50%), Gaps = 15/464 (3%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
I A I +G +NL++ + + ++++G ARK F++M RN VS ++ G +
Sbjct: 173 ILARIKKSGLLANLYVGSALAGGFSRLGSFDYARKIFEQMTARNAVSMNGLMVGLVRQKC 232
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWL----QGGRMIQG-SIQKGRFVENL 166
E A+ VF R V N +Y L ACA L + GR + G +I+ G +
Sbjct: 233 GEEAVEVFKET-RHLVDINVDSYVILLSACAEFALLDEGRRKGREVHGYAIRTGLNDAKV 291
Query: 167 FVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ 226
V + L+++YAKCG I+ A +F + KD VSWN+MI GL +D+ + SM +
Sbjct: 292 AVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKT 351
Query: 227 GMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIR 284
G+ P FTL S L AS+G I L + Q H IKLGL+ ++ +L+ +YA+ G +
Sbjct: 352 GLMPSNFTLISALSSCASLGCILLGQ--QTHGEGIKLGLDMDVSVSNTLLALYAETGHLA 409
Query: 285 SAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNIC 344
+++ ML+ D +S +I A EA ++F +M+ + V +L
Sbjct: 410 ECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATV 469
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD-KNVISW 403
+++++ L QIHA KY D A+ NAL+ Y KSGE+ + F M + ++ +SW
Sbjct: 470 SSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSW 529
Query: 404 TSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMIN 463
S+I+GY + +A++L M G + TF ++L AC+ G E+ I
Sbjct: 530 NSMISGYIHNDLLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLERGMEVHACAI- 588
Query: 464 KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
+ + S +VD++++ G+++ A R N+ P +L+S
Sbjct: 589 RACLESDVVIGSALVDMYSKCGRIDYAS---RFFNLMPMRNLYS 629
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/475 (25%), Positives = 234/475 (49%), Gaps = 22/475 (4%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAK-VGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
IH I+ + Y ++ L +I Y K +G + AR FD + RN + W +++S Y+Q G
Sbjct: 65 IHGLILKSPYANDASLCNVLISMYGKYLGYIDYARSVFDEIEIRNSIYWNSIVSVYSQRG 124
Query: 111 YDENALLVFSAMLRS----GVRANQFTYSSALR-ACARM-RWLQGGRMIQGSIQKGRFVE 164
+ +FS+M + ++ N++T+ S + AC+ + L I I+K +
Sbjct: 125 DAASCFELFSSMQMADSGLSLKPNEYTFGSLITAACSSVDSGLSLLGQILARIKKSGLLA 184
Query: 165 NLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMM 224
NL+V SAL +++ G + A +FE++ ++ VS N ++ GL Q +++ +F+
Sbjct: 185 NLYVGSALAGGFSRLGSFDYARKIFEQMTARNAVSMNGLMVGLVRQKCGEEAVEVFKETR 244
Query: 225 R-QGMKPDCFTLGSILRASVGGIELM-----KISQIHDLIIKLGLESSNKLTGS-LIDVY 277
+ D + IL ++ L+ K ++H I+ GL + G+ LI++Y
Sbjct: 245 HLVDINVDSYV---ILLSACAEFALLDEGRRKGREVHGYAIRTGLNDAKVAVGNGLINMY 301
Query: 278 AKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHS-KEAFDLFKDMILKKMGIDDVI 336
AK G I A ++ M+ D +S ++I+G D N ++A + M + +
Sbjct: 302 AKCGDIDHARSVFGLMVDKDSVSWNSMITGL--DQNKCFEDAVKSYNSMRKTGLMPSNFT 359
Query: 337 LCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG 396
L L+ CA++ + LG+Q H K D +V N L+ +YA++G +A+ + F M
Sbjct: 360 LISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETGHLAECQKVFSWML 419
Query: 397 DKNVISWTSLIAGYAKHGYG-HEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGW 455
+++ +SW ++I A G EAIE++ +M G PN VTF++LL S +
Sbjct: 420 ERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSH 479
Query: 456 ELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
++ +I KY + + ++ + + G++E+ + +M+ + W++++
Sbjct: 480 QIHA-LILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMI 533
>gi|297742226|emb|CBI34375.3| unnamed protein product [Vitis vinifera]
Length = 814
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 171/516 (33%), Positives = 280/516 (54%), Gaps = 6/516 (1%)
Query: 64 NLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDE-NALLVFSAM 122
++HL+ ++ Y++ G A K FD M E +VVSWT I YD A +F +
Sbjct: 253 SIHLNNALMNMYSRCGSKSDAIKMFDEMTEPDVVSWTERIGA----AYDAIEAFELFRLV 308
Query: 123 LRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWI 182
L + N++ + L A + L+ GR IQG QK ++ V +AL+ +Y KCG +
Sbjct: 309 LSGNMEVNEYMLINVLSAMREPKLLKSGRQIQGLCQKAGYLLVASVNNALIFMYGKCGEM 368
Query: 183 EDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS 242
A +F+ + D VSWN++I G A G + +F M ++P+ +TL SIL +
Sbjct: 369 VAARHIFDEMLCGDSVSWNSLIAGYAENGLMKQALKVFSQMRDYLLQPNKYTLASILEVA 428
Query: 243 VGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCT 302
+ QIH I+KLG + + LI Y K I + ++Y + + +++
Sbjct: 429 ANSNFPEQAMQIHSYIVKLGFIVDDSMLSCLITAYGKCNMICESKRVYSDISQINVLHLN 488
Query: 303 ALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK 362
A+ + H+ +A LF+ +D + L ++L C + L GR IH+ A K
Sbjct: 489 AMAATLVHAGCHA-DALKLFQTGWRLHQEVDCITLSIVLKACGALTDLEYGRNIHSMALK 547
Query: 363 YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIEL 422
S D V +A+ID+Y K G + +A + F + N+++W +++ GYA+HG HE EL
Sbjct: 548 SGMSQDNFVESAVIDVYCKCGTVDEAAKTFMNVSKNNLVAWNAMVMGYAQHGCYHEVFEL 607
Query: 423 YKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFA 482
+ KM G+ P+++T+L +L +C H GL E + M+ + ++P EH++C++DLF
Sbjct: 608 FNKMLELGIQPDEITYLGVLNSCCHAGLVNEAHTYLSSMLELHGVVPCLEHYACMIDLFG 667
Query: 483 RRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVV 542
R G LE A I QM I P A +W +L C+I+GN LGE+AA+ L +++PE YV+
Sbjct: 668 RVGLLEDAKRTIDQMPIMPDAQIWQILLSGCNIHGNVDLGEVAAKKLIELQPENDSAYVL 727
Query: 543 LSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
LSN+Y +AG W+ K R++M+++ + K PG S++Q
Sbjct: 728 LSNLYASAGRWNAVGKLRRVMKKKIICKEPGSSWIQ 763
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 131/458 (28%), Positives = 233/458 (50%), Gaps = 27/458 (5%)
Query: 53 HAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYD 112
+A + +G+ + LS+ ++ +A GD AR+ P + VSW ++ISGYA+
Sbjct: 43 YALFLKSGFALDAFLSSFIVNRFAISGDFARARRFLLDTPYPDTVSWNSLISGYARFRQP 102
Query: 113 ENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVE----NLFV 168
+F+ + RSG+ ++F+ SS ++ C G + Q + G ++ N FV
Sbjct: 103 GPVFDLFNGLRRSGLSPDEFSLSSLVKGC--------GVLEQNEVAHGVCLKMGLLNGFV 154
Query: 169 KSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM--MRQ 226
S LLD YAK G ++ A F+ D V W AM+ G G + +F M +
Sbjct: 155 VSGLLDGYAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNGEFEKGREVFVEMRGLGL 214
Query: 227 GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGL--ESSNKLTGSLIDVYAKYGSIR 284
G++ + F+L S+L A ++ + Q+ L +K+GL S L +L+++Y++ GS
Sbjct: 215 GLELNEFSLTSVLGALS---DVREGEQVFGLSVKMGLLCGCSIHLNNALMNMYSRCGSKS 271
Query: 285 SAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNIC 344
A +++ M + D++S T I G A D + EAF+LF+ ++ M +++ +L +L+
Sbjct: 272 DAIKMFDEMTEPDVVSWTERI-GAAYD---AIEAFELFRLVLSGNMEVNEYMLINVLSAM 327
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWT 404
L GRQI K A+V NALI MY K GE+ A FDEM + +SW
Sbjct: 328 REPKLLKSGRQIQGLCQKAGYLLVASVNNALIFMYGKCGEMVAARHIFDEMLCGDSVSWN 387
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK 464
SLIAGYA++G +A++++ +M+ + PN T S+L +++ + ++ + ++ K
Sbjct: 388 SLIAGYAENGLMKQALKVFSQMRDYLLQPNKYTLASILEVAANSNFPEQAMQIHSYIV-K 446
Query: 465 YRILPRAEHFSCVVDLFARRGQL---ESAYNMIRQMNI 499
+ SC++ + + + + Y+ I Q+N+
Sbjct: 447 LGFIVDDSMLSCLITAYGKCNMICESKRVYSDISQINV 484
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 179/359 (49%), Gaps = 7/359 (1%)
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
GY ++ +I Y K G++++AR FD M + VSW ++I+GYA+NG + AL VF
Sbjct: 347 GYLLVASVNNALIFMYGKCGEMVAARHIFDEMLCGDSVSWNSLIAGYAENGLMKQALKVF 406
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
S M ++ N++T +S L A + + I I K F+ + + S L+ Y KC
Sbjct: 407 SQMRDYLLQPNKYTLASILEVAANSNFPEQAMQIHSYIVKLGFIVDDSMLSCLITAYGKC 466
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
I ++ ++ I + +V+ NAM L G + D+ LF++ R + DC TL +L
Sbjct: 467 NMICESKRVYSDISQINVLHLNAMAATLVHAGCHADALKLFQTGWRLHQEVDCITLSIVL 526
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
+A +L IH + +K G+ N + ++IDVY K G++ A + + ++ K +++
Sbjct: 527 KACGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDVYCKCGTVDEAAKTFMNVSKNNLV 586
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
+ A++ G+A+ + E F+LF M+ + D++ +LN C + +N +
Sbjct: 587 AWNAMVMGYAQHGCY-HEVFELFNKMLELGIQPDEITYLGVLNSCCHAGLVNEAHTYLSS 645
Query: 360 AFKYQSSYDAAVGNA-LIDMYAKSGEIADANRAFDE---MGDKNVISWTSLIAGYAKHG 414
+ A +ID++ + G + DA R D+ M D + W L++G HG
Sbjct: 646 MLELHGVVPCLEHYACMIDLFGRVGLLEDAKRTIDQMPIMPDAQI--WQILLSGCNIHG 702
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 137/281 (48%), Gaps = 3/281 (1%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ G +KQALK D LL P+ Y S+L+ + QA IH++I+ G+ +
Sbjct: 395 ENGLMKQALKVFSQMRDYLLQPNKYTLASILEVAANSNFPEQAMQIHSYIVKLGFIVDDS 454
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ + +I Y K + +++ + + + NV+ AM + G +AL +F R
Sbjct: 455 MLSCLITAYGKCNMICESKRVYSDISQINVLHLNAMAATLVHAGCHADALKLFQTGWRLH 514
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
+ T S L+AC + L+ GR I K ++ FV+SA++D+Y KCG +++A
Sbjct: 515 QEVDCITLSIVLKACGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDVYCKCGTVDEAA 574
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFT-LGSILRASVGG 245
F + + ++V+WNAM+ G A G + F LF M+ G++PD T LG + G
Sbjct: 575 KTFMNVSKNNLVAWNAMVMGYAQHGCYHEVFELFNKMLELGIQPDEITYLGVLNSCCHAG 634
Query: 246 IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSA 286
+ + + ++ G+ + +ID++ + G + A
Sbjct: 635 LVNEAHTYLSSMLELHGVVPCLEHYACMIDLFGRVGLLEDA 675
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 120/277 (43%), Gaps = 12/277 (4%)
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
LRAS + Q + L +K G L+ +++ +A G A + D
Sbjct: 27 LRASASLLHPPLTDQSYALFLKSGFALDAFLSSFIVNRFAISGDFARARRFLLDTPYPDT 86
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
+S +LISG+AR FDLF + + D+ L ++ C L H
Sbjct: 87 VSWNSLISGYAR-FRQPGPVFDLFNGLRRSGLSPDEFSLSSLVKGC---GVLEQNEVAHG 142
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHE 418
K + V + L+D YAK G++ A + F E + + WT+++ G+ +G +
Sbjct: 143 VCLK-MGLLNGFVVSGLLDGYAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNGEFEK 201
Query: 419 AIELYKKMK--HEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF-S 475
E++ +M+ G+ N+ + S+L A S EG ++F + + + H +
Sbjct: 202 GREVFVEMRGLGLGLELNEFSLTSVLGALSDVR---EGEQVFGLSVKMGLLCGCSIHLNN 258
Query: 476 CVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
++++++R G A M +M +P W+ +GA
Sbjct: 259 ALMNMYSRCGSKSDAIKMFDEMT-EPDVVSWTERIGA 294
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 313 NHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG 372
HS +A K ++LK++ L A++ L Q +A K + DA +
Sbjct: 6 THS-DALQSIKTLVLKRLYPQ------ALRASASLLHPPLTDQSYALFLKSGFALDAFLS 58
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
+ +++ +A SG+ A A R + + +SW SLI+GYA+ +L+ ++ G+
Sbjct: 59 SFIVNRFAISGDFARARRFLLDTPYPDTVSWNSLISGYARFRQPGPVFDLFNGLRRSGLS 118
Query: 433 PNDVTFLSLLFACS--HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA 490
P++ + SL+ C G L ++N + + S ++D +A+ G ++SA
Sbjct: 119 PDEFSLSSLVKGCGVLEQNEVAHGVCLKMGLLNGFVV-------SGLLDGYAKLGDVDSA 171
Query: 491 YNMIRQMNIKPTASLWSAIL 510
++ I + +W+A++
Sbjct: 172 EKCFKEFYIADSV-VWTAMV 190
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 185/536 (34%), Positives = 297/536 (55%), Gaps = 10/536 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IH G++ N+ ++ +I Y++ G AR FD MP R++ SW AMISG QNG
Sbjct: 237 IHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGN 296
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
AL V M G++ N T S L C ++ + +I + K +LFV +A
Sbjct: 297 AAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNA 356
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD---SFWLFRSMMRQGM 228
L+++YAK G +EDA F+++ DVVSWN++I NDD + F M G
Sbjct: 357 LINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQ---NDDPVTAHGFFVKMQLNGF 413
Query: 229 KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG-SLIDVYAKYGSIRSAY 287
+PD TL S+ + +H I++ G + + G +++D+YAK G + SA+
Sbjct: 414 QPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAH 473
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI-LKKMGIDDVILCLMLNICAN 346
+++ + D+IS LI+G+A++ + EA +++K M K++ + +L A+
Sbjct: 474 KVFEIIPVKDVISWNTLITGYAQN-GLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAH 532
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
V +L G +IH K D V LID+Y K G + DA F ++ ++ ++W ++
Sbjct: 533 VGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAI 592
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYR 466
I+ + HG+ + ++L+ +M EG+ P+ VTF+SLL ACSH+G EG F ++ +Y
Sbjct: 593 ISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFR-LMQEYG 651
Query: 467 ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAA 526
I P +H+ C+VDL R G LE AY+ I+ M ++P AS+W A+LGAC I+GN LG+ A+
Sbjct: 652 IKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFAS 711
Query: 527 RNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
LF+++ + YV+LSNIY G W+ K R L ER L+K PG+S ++ ++K
Sbjct: 712 DRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRK 767
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 157/531 (29%), Positives = 287/531 (54%), Gaps = 18/531 (3%)
Query: 49 AHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQ 108
A +HA ++ G ++ +ST+++ YA +GDV +R FD++P+++V +W +MIS Y
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 194
Query: 109 NGYDENALLVF-SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLF 167
NG+ A+ F +L S +R + +T+ L+AC L GR I K F N+F
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGT---LVDGRKIHCWAFKLGFQWNVF 251
Query: 168 VKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
V ++L+ +Y++ G+ A LF+ + +D+ SWNAMI GL G + + M +G
Sbjct: 252 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 311
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
+K + T+ SIL ++ IH +IK GLE ++ +LI++YAK+G++ A
Sbjct: 312 IKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDAR 371
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
+ ++ M TD++S ++I+ + ++D+ A F M L D + L + +I A
Sbjct: 372 KAFQQMFITDVVSWNSIIAAYEQNDD-PVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQS 430
Query: 348 ASLNLGRQIHAFAFKYQ-SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
R +H F + D +GNA++DMYAK G + A++ F+ + K+VISW +L
Sbjct: 431 RDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTL 490
Query: 407 IAGYAKHGYGHEAIELYKKMKH-EGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
I GYA++G EAIE+YK M+ + ++PN T++S+L A +H G +G ++ +I K
Sbjct: 491 ITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVI-KT 549
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTS----- 520
+ +C++D++ + G+L A ++ Q+ + ++ W+AI+ I+G+
Sbjct: 550 NLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVP-QESSVTWNAIISCHGIHGHAEKTLKL 608
Query: 521 LGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKN 571
GE+ + +P+ V +V L + + +G + + +LM+E ++ +
Sbjct: 609 FGEMLDEGV---KPDH-VTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPS 655
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 187/386 (48%), Gaps = 4/386 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T +S+L C A LIH ++I +G E +L +S +I YAK G++ ARKAF +M
Sbjct: 318 TVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQM 377
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
+VVSW ++I+ Y QN A F M +G + + T S A+ R + R
Sbjct: 378 FITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSR 437
Query: 152 MIQGSI-QKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ G I ++G +E++ + +A++D+YAK G ++ A +FE I KDV+SWN +I G A
Sbjct: 438 SVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQN 497
Query: 211 GFNDDSFWLFRSMMR-QGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
G ++ +++ M + + P+ T SIL A L + +IH +IK L +
Sbjct: 498 GLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFV 557
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
LIDVY K G + A L+ + + ++ A+IS H+++ LF +M+ +
Sbjct: 558 ATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGI-HGHAEKTLKLFGEMLDEG 616
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ D V +L+ C++ + G+ +Y ++D+ ++G + A
Sbjct: 617 VKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAY 676
Query: 390 RAFDEMG-DKNVISWTSLIAGYAKHG 414
+M + W +L+ HG
Sbjct: 677 DFIKDMPLQPDASIWGALLGACRIHG 702
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 1/198 (0%)
Query: 15 QALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIF 74
+ K C + + + T++S+L A +Q IH +I ++ ++T +I
Sbjct: 505 EVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDV 564
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
Y K G ++ A F ++P+ + V+W A+IS + +G+ E L +F ML GV+ + T+
Sbjct: 565 YGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTF 624
Query: 135 SSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE- 193
S L AC+ +++ G+ +Q+ +L ++DL + G++E A+ + +
Sbjct: 625 VSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPL 684
Query: 194 RKDVVSWNAMIGGLAMQG 211
+ D W A++G + G
Sbjct: 685 QPDASIWGALLGACRIHG 702
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 156/391 (39%), Positives = 243/391 (62%), Gaps = 1/391 (0%)
Query: 192 IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI 251
+E D VSWN++I G +GF +D+ F+ M + MK D +TL S+L + +
Sbjct: 1 MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNA 60
Query: 252 SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD 311
+H LIIK G E+ + +LID+YAK G + A ++ M+ D++S T+L++G++ +
Sbjct: 61 ISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHN 120
Query: 312 DNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAV 371
++ +EA LF M + + D + + +L+ CA + ++ G+QIHA K +V
Sbjct: 121 GSY-EEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSV 179
Query: 372 GNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGM 431
N+L+ MYAK G I DANRAFD M ++VISWT+LI GYA++G G +++ Y +M G
Sbjct: 180 DNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGT 239
Query: 432 VPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAY 491
P+ +TF+ LLFACSH GL G F M Y I P EH++C++DL R G+L A
Sbjct: 240 KPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAK 299
Query: 492 NMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAG 551
++ QM + P A +W A+L AC ++ LGE+AA+NLF++EP S+ YV+LSN+Y+AAG
Sbjct: 300 GLLNQMVVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAG 359
Query: 552 AWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
W++A + R+LM R + K PGYS+++++ K
Sbjct: 360 KWEDAARIRRLMRSRGICKEPGYSWIETNSK 390
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 164/322 (50%), Gaps = 9/322 (2%)
Query: 97 VSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGS 156
VSW ++I G + G++E+AL F M ++ +++T S L + A M+ +Q +
Sbjct: 7 VSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCL 66
Query: 157 IQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDS 216
I K F V +AL+D+YAK G ++ A ++F ++ KDVVSW +++ G + G +++
Sbjct: 67 IIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEA 126
Query: 217 FWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDV 276
LF M G+ PD + S+L A + QIH ++K GLESS + SL+ +
Sbjct: 127 IKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTM 186
Query: 277 YAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVI 336
YAK GSI A + + +M D+IS TALI G+A+ + K + + MI D +
Sbjct: 187 YAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQ-NGRGKHSLQFYDQMIATGTKPDYIT 245
Query: 337 LCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN----ALIDMYAKSGEIADANRAF 392
+L C++ L GR A+ Y G +ID+ +SG++A+A
Sbjct: 246 FIGLLFACSHNGLLGSGR---AYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLL 302
Query: 393 DEM-GDKNVISWTSLIAGYAKH 413
++M + + W +L+A H
Sbjct: 303 NQMVVAPDAVVWKALLAACRVH 324
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 146/297 (49%), Gaps = 7/297 (2%)
Query: 1 MNIVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIIT 58
+ VR F+ + AL F + D +D T S+L K + A +H II
Sbjct: 14 LGCVREGFE----EDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCLIIK 69
Query: 59 NGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLV 118
G+E+ ++ +I YAK G + A F +M +++VVSWT++++GY+ NG E A+ +
Sbjct: 70 TGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKL 129
Query: 119 FSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
F M SGV +Q +S L ACA + + G+ I ++ K +L V ++L+ +YAK
Sbjct: 130 FCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAK 189
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFT-LGS 237
CG I DA F+ + +DV+SW A+I G A G S + M+ G KPD T +G
Sbjct: 190 CGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGL 249
Query: 238 ILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML 294
+ S G+ + + G++ + +ID+ + G + A L M+
Sbjct: 250 LFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMV 306
>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic [Vitis vinifera]
Length = 825
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 182/540 (33%), Positives = 306/540 (56%), Gaps = 14/540 (2%)
Query: 49 AHLIHAHIITNG--YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGY 106
A++++ ++ G + + + + I YA++G V AR+ FD ERN W MI GY
Sbjct: 237 ANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGY 296
Query: 107 AQNGYDENALLVFSAMLRS-GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVEN 165
QN A+ +F ++ S + T+ SAL A ++++WL+ GR + I K +
Sbjct: 297 VQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYILKSSTILQ 356
Query: 166 LFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR 225
+ + +A++ +Y++CG I ++ +F + +DVV+WN M+ G +D+ L +M +
Sbjct: 357 VVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQK 416
Query: 226 QGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
QG D TL ++L +++ E+ K Q H +I+ G++ + LID+YAK G I
Sbjct: 417 QGFMVDSVTLTALLSLASNLRSQEIGK--QAHAYLIRHGIQFEG-MDSYLIDMYAKSGLI 473
Query: 284 RSAYQLYR--SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLML 341
+A QL+ S D + A+I+G+ ++ S+E F +F+ MI + + + V L +L
Sbjct: 474 TTAQQLFEKNSDYDRDEATWNAMIAGYTQN-GLSEEGFAVFRKMIEQNVRPNAVTLASIL 532
Query: 342 NICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVI 401
C + ++ LG+QIH FA + + + VG AL+DMY+KSG I A F E +KN +
Sbjct: 533 PACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLEKNSV 592
Query: 402 SWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM 461
++T++I+ Y +HG G A+ L+ M G+ P+ VTF+++L ACS+ GL EG +F M
Sbjct: 593 TYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSM 652
Query: 462 INKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP-TASLWSAILGACSIYGNTS 520
+Y+I P AEH+ CV D+ R G++ AY ++ + + T +W ++LGAC I+G
Sbjct: 653 EREYKIQPSAEHYCCVADMLGRVGRVVEAYEFVKGLGEEGNTFGIWGSLLGACRIHGEFE 712
Query: 521 LGELAARNLFDMEPEKSVN--YVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
LG++ A L +ME S+ +V+LSNIY A G WDN + RK M ++ L K G S+++
Sbjct: 713 LGKVVANKLLEMEKGSSLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWVE 772
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 147/575 (25%), Positives = 280/575 (48%), Gaps = 38/575 (6%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG-------YESNLHLSTKVIIFYA 76
P D T+ S L+ C ++ + +H H++ + Y S L++ + +
Sbjct: 98 PSPKFDSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVP 157
Query: 77 KVGDVLS------ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
+G R+ FD M +RNVV+W MIS Y + A +F M+R G+R
Sbjct: 158 YLGTAYDFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPT 217
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQK--GRFVENLFVKSALLDLYAKCGWIEDAWIL 188
++ + A RM ++ G + K FV++ FV S+ + +YA+ G ++ A +
Sbjct: 218 PVSFVNVFPAVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREI 277
Query: 189 FERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR-QGMKPDCFTLGSILRASVGGIE 247
F+ ++ WN MIGG ++ LF +M + D T S L A + ++
Sbjct: 278 FDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTA-ISQLQ 336
Query: 248 LMKIS-QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
+++ Q+H I+K + ++I +Y++ GSI ++++++ +ML+ D+++ ++S
Sbjct: 337 WLELGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVS 396
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
F + + E L M + +D V L +L++ +N+ S +G+Q HA+ ++
Sbjct: 397 AFVQ-NGLDDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQ 455
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMG--DKNVISWTSLIAGYAKHGYGHEAIELYK 424
++ + + LIDMYAKSG I A + F++ D++ +W ++IAGY ++G E +++
Sbjct: 456 FE-GMDSYLIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFR 514
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF-SCVVDLFAR 483
KM + + PN VT S+L AC+ G G ++ I + L R + ++D++++
Sbjct: 515 KMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCF--LNRNVFVGTALLDMYSK 572
Query: 484 RGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD------MEPEKS 537
G + A N+ + K + + + I S YG +GE A +LF ++P+ S
Sbjct: 573 SGAITYAENVFAETLEKNSVTYTTMI----SSYGQHGMGE-RALSLFHAMLGSGIKPD-S 626
Query: 538 VNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNP 572
V +V + + + AG D + + M ER + P
Sbjct: 627 VTFVAILSACSYAGLVDEGLRIFQSM-EREYKIQP 660
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 122/496 (24%), Positives = 240/496 (48%), Gaps = 52/496 (10%)
Query: 79 GDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS-GVRANQFTYSSA 137
G A FD +P V W +I G+ N +ALL ++ M S + + +T+SS
Sbjct: 51 GHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSST 110
Query: 138 LRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC----GWIEDAW------- 186
L+ACA+ R L+ G+ + + + F + V ++LL++Y+ C ++ A+
Sbjct: 111 LKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDL 170
Query: 187 --ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG 244
+F+ + +++VV+WN MI ++F +FR+MMR G++P + ++ A
Sbjct: 171 VRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWR 230
Query: 245 GIELMKISQIHDLIIKLGLESSNK--LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCT 302
+ + ++ L++KLG + + + S I +YA+ G + A +++ L+ +
Sbjct: 231 MSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWN 290
Query: 303 ALISGFARDDNHSKEAFDLF-KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF 361
+I G+ + +N EA DLF + M ++ +DDV L + + L LGRQ+HA+
Sbjct: 291 TMIGGYVQ-NNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYIL 349
Query: 362 KYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIE 421
K + + NA+I MY++ G I + + F M +++V++W ++++ + ++G E +
Sbjct: 350 KSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLM 409
Query: 422 LYKKMKHEGMVPNDVTFLSLLFACSHT----------------GLTCEGWELF-TDMINK 464
L M+ +G + + VT +LL S+ G+ EG + + DM K
Sbjct: 410 LVFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDSYLIDMYAK 469
Query: 465 YRILPRAEH--------------FSCVVDLFARRGQLESAYNMIRQM---NIKPTASLWS 507
++ A+ ++ ++ + + G E + + R+M N++P A +
Sbjct: 470 SGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLA 529
Query: 508 AILGACSIYGNTSLGE 523
+IL AC+ G LG+
Sbjct: 530 SILPACNPMGTIGLGK 545
>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g13880-like [Cucumis sativus]
Length = 839
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 195/564 (34%), Positives = 299/564 (53%), Gaps = 12/564 (2%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD T L C +IH I+ G S + L+ +I Y+K G V AR
Sbjct: 158 LDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARIL 217
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD + + VSW ++I+GY QNG E L + M ++G+ N +T SAL+AC+
Sbjct: 218 FDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSN--F 275
Query: 148 QG----GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
G G M+ K ++ V +ALLD+YAK G ++DA +F+++ K+VV +NAM
Sbjct: 276 NGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAM 335
Query: 204 IGGLAMQGFNDD-----SFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLI 258
+ GL Q +D + LF M G+KP FT S+L+A + + Q+H L+
Sbjct: 336 MAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALM 395
Query: 259 IKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEA 318
K GL S + LID+Y+ GS+ A + S+ I+ TA+I G+ ++ + A
Sbjct: 396 CKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXGYLQNGEF-ESA 454
Query: 319 FDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDM 378
LF +++ + D+ I +++ CAN+ L G QI A K S N+ I M
Sbjct: 455 LSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWM 514
Query: 379 YAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTF 438
YAKSG++ AN F +M + +++SW+++I A+HG+ EA+ ++ MK G+ PN F
Sbjct: 515 YAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAF 574
Query: 439 LSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMN 498
L +L ACSH GL EG F M Y++ +H CVVDL R G+L A ++I ++
Sbjct: 575 LGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLG 634
Query: 499 IKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARK 558
+ +W A+L AC I+ +T + A+ + ++EP S +YV+L NIY AG A K
Sbjct: 635 FEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASK 694
Query: 559 TRKLMEERSLRKNPGYSFLQSSKK 582
R LMEER ++K PG S++Q K
Sbjct: 695 VRTLMEERRIKKEPGLSWIQIGDK 718
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/504 (26%), Positives = 261/504 (51%), Gaps = 20/504 (3%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
LL+ Y+ L+Q L+H+H+I + L L ++ Y K GD SA K
Sbjct: 56 LLESVDYVKLVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADK 115
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FD+M + N+V++ ++ISGY Q + +++F R G++ +++T + AL AC++
Sbjct: 116 LFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGN 175
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
L G+MI G I + + ++L+D+Y+KCG ++ A ILF+ ++ D VSWN++I G
Sbjct: 176 LSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAG 235
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI--SQIHDLIIKLGLE 264
G ++ + + M + G+ + +TLGS L+A K+ + +HD IKLGL
Sbjct: 236 YVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLH 295
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR----DDNHSKEAFD 320
+ +L+D+YAK GS+ A Q++ M+ +++ A+++G + +D + +A +
Sbjct: 296 LDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALN 355
Query: 321 LFKDMILKKMGIDDVILCL--MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDM 378
LF +M K GI + +L C V +Q+HA K D +G+ LID+
Sbjct: 356 LFFEM--KSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDL 413
Query: 379 YAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTF 438
Y+ G + DA F+ + + ++ T++I GY ++G A+ L+ ++ P++
Sbjct: 414 YSVLGSMMDALLCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIX 473
Query: 439 LSLLFACSHTGLTCEGWELFTDM----INKYRILPRAEHFSCVVDLFARRGQLESAYNMI 494
+++ +C++ G+ G ++ I+++ I ++ + ++A+ G L +A
Sbjct: 474 STIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQ-----IWMYAKSGDLYAANLTF 528
Query: 495 RQMNIKPTASLWSAILGACSIYGN 518
+QM P WS ++ + + +G+
Sbjct: 529 QQME-NPDIVSWSTMICSNAQHGH 551
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 195/583 (33%), Positives = 314/583 (53%), Gaps = 44/583 (7%)
Query: 34 MSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVI---IFYAKVGDVLSARKAFDR 90
+SLL C K + +IHA +I G + + +K+I I + A F
Sbjct: 37 LSLLHNC---KTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKT 93
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+ E N++ W M G+A + +AL ++ M+ G+ N +T+ L++CA+ + + G
Sbjct: 94 IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEG 153
Query: 151 RMIQGSI--------------------QKGRF--VENLFVKS---------ALLDLYAKC 179
+ I G + Q GR +F KS AL+ YA
Sbjct: 154 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASR 213
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G+IE+A LF+ I KDVVSWNAMI G A G ++ LF+ MM+ ++PD T+ +++
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273
Query: 240 RASV--GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
A G IEL + Q+H I G S+ K+ +LID+Y+K G + +A L+ + D
Sbjct: 274 SACAQSGSIELGR--QVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKD 331
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
+IS LI G+ N KEA LF++M+ +DV + +L CA++ ++++GR IH
Sbjct: 332 VISWNTLIGGYTHM-NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIH 390
Query: 358 AFAFKYQSSYDAA--VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGY 415
+ K A + +LIDMYAK G+I A++ F+ + K++ SW ++I G+A HG
Sbjct: 391 VYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGR 450
Query: 416 GHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFS 475
+ +L+ +M+ G+ P+D+TF+ LL ACSH+G+ G +F M Y++ P+ EH+
Sbjct: 451 ADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYG 510
Query: 476 CVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPE 535
C++DL G + A MI M ++P +W ++L AC ++GN LGE A NL +EPE
Sbjct: 511 CMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPE 570
Query: 536 KSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+YV+LSNIY +AG W+ KTR L+ ++ ++K PG S ++
Sbjct: 571 NPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIE 613
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 132/390 (33%), Positives = 206/390 (52%), Gaps = 43/390 (11%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ +L+ C KA ++ IH H++ G + +L++ T +I Y + G + A K FD+
Sbjct: 136 TFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKS 195
Query: 92 PERNVVSWTAMISGYAQNGYDEN-------------------------------ALLVFS 120
P R+VVS+TA+I GYA GY EN AL +F
Sbjct: 196 PHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 255
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M+++ VR ++ T + + ACA+ ++ GR + I F NL + +AL+DLY+KCG
Sbjct: 256 DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG 315
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+E A LFER+ KDV+SWN +IGG ++ LF+ M+R G P+ T+ SIL
Sbjct: 316 ELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILP 375
Query: 241 --ASVGGIELMKISQIHDLIIKL--GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT 296
A +G I++ + IH I K G+ +++ L SLID+YAK G I +A+Q++ S+L
Sbjct: 376 ACAHLGAIDIGR--WIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK 433
Query: 297 DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI--DDVILCLMLNICANVASLNLGR 354
+ S A+I GFA + +FDLF M +K+GI DD+ +L+ C++ L+LGR
Sbjct: 434 SLSSWNAMIFGFAM-HGRADASFDLFSRM--RKIGIQPDDITFVGLLSACSHSGMLDLGR 490
Query: 355 QI-HAFAFKYQSSYDAAVGNALIDMYAKSG 383
I Y+ + +ID+ SG
Sbjct: 491 HIFRTMTQDYKMTPKLEHYGCMIDLLGHSG 520
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 129/237 (54%), Gaps = 4/237 (1%)
Query: 9 KTGQLKQALKFSLSCPDTLLDP--STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+TG K+AL+ T + P ST ++++ C + +H I +G+ SNL
Sbjct: 243 ETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLK 302
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ +I Y+K G++ +A F+R+P ++V+SW +I GY + ALL+F MLRSG
Sbjct: 303 IVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG 362
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKG-RFVENL-FVKSALLDLYAKCGWIED 184
N T S L ACA + + GR I I K + V N ++++L+D+YAKCG IE
Sbjct: 363 ETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEA 422
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
A +F I K + SWNAMI G AM G D SF LF M + G++PD T +L A
Sbjct: 423 AHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSA 479
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 176/556 (31%), Positives = 314/556 (56%), Gaps = 8/556 (1%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
T+ P + ++L++ C + + +Q IHA I + + TK+I + + A
Sbjct: 2 TIQTPKSVLALIETCTNIQQLKQ---IHAKSIISSLSYTQFIITKIINSFLSHACLDYAT 58
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLR-SGVRANQFTYSSALRACARM 144
+ F++ E + + AMI Y+ + A+ +++ M + +++TY +ACA
Sbjct: 59 QVFNQTQEPDGFIYNAMIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQ 118
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
++ G+ + G I + + + F++S+LL+ Y CG I +A +F+ + KDVV WNA+I
Sbjct: 119 FAVEKGKEVHGVIVRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALI 178
Query: 205 GGLAMQGFNDDSFWLFRSMMR-QGMKPDCFTLGSILRASVGGIELMKISQIHDLIIK-LG 262
G A QG DSF +F+ M+ + ++P+ T+ ++ A + L IH ++K +
Sbjct: 179 TGYARQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMV 238
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
L KL +LI++Y K G + A +L+ + + + + +LI G+ + + + E +L
Sbjct: 239 LREGVKLEAALINLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLN-EVIELL 297
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
++M L + D + +L+ CA + + NLG +H FA K + +D +G ALIDMYAK
Sbjct: 298 REMHLSNLKPDRFTVSGVLSACAQMGAFNLGNWVHRFAEK-KGIWDVFIGTALIDMYAKC 356
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
G I A + FD+M ++NV +W ++++GYA HG AIEL+ +M+ G P+ +TFL++L
Sbjct: 357 GFIGAARKVFDQMNERNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVL 416
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
AC+H+GL G + F M+ Y+I PR EH+ C+VDL R G L+ A +I+ M ++P
Sbjct: 417 HACAHSGLVENGKQYFDLMLQYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPN 476
Query: 503 ASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKL 562
+W A+L ACSI+GN +GE AA ++ + +YV+L+N+Y +A ++ + R++
Sbjct: 477 VVVWGALLSACSIHGNIEIGEWAAHHMIKLNAMDGGSYVILANLYASAQRFNRVKAVREM 536
Query: 563 MEERSLRKNPGYSFLQ 578
M E+ + K+ G S ++
Sbjct: 537 MVEKGICKSHGCSMIE 552
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 204/399 (51%), Gaps = 10/399 (2%)
Query: 22 SCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDV 81
+C + L D TY + + C + A + +H I+ GYE + L + ++ FY G++
Sbjct: 97 ACQNILGDKYTYPFVFKACASQFAVEKGKEVHGVIVRIGYELDGFLQSSLLNFYMVCGEI 156
Query: 82 LSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLR-SGVRANQFTYSSALRA 140
+A++ FD ++VV W A+I+GYA+ G ++ VF M+ VR N+ T + A
Sbjct: 157 GNAQQVFDEFDAKDVVFWNALITGYARQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVA 216
Query: 141 CARMRWLQGGRMIQGSIQKGRFV-ENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS 199
C + L+ GR I G + K + E + +++AL++LY KCG+++ A LF+ I K+ V
Sbjct: 217 CIESKNLKLGRAIHGYMMKDMVLREGVKLEAALINLYVKCGYLDGARKLFDEIPEKNTVV 276
Query: 200 WNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDL 257
WN++I G G ++ L R M +KPD FT+ +L A +G L + +H
Sbjct: 277 WNSLICGYCQIGSLNEVIELLREMHLSNLKPDRFTVSGVLSACAQMGAFNLG--NWVHRF 334
Query: 258 IIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKE 317
K G+ + +LID+YAK G I +A +++ M + ++ + A++SG+A ++
Sbjct: 335 AEKKGIWDVF-IGTALIDMYAKCGFIGAARKVFDQMNERNVATWNAILSGYA-SHGQAES 392
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK-YQSSYDAAVGNALI 376
A +LF +M D + +L+ CA+ + G+Q + Y+ ++
Sbjct: 393 AIELFSEMRESGARPDSITFLAVLHACAHSGLVENGKQYFDLMLQYYKIPPRVEHYGCMV 452
Query: 377 DMYAKSGEIADANRAFDEM-GDKNVISWTSLIAGYAKHG 414
D+ ++G + +A M + NV+ W +L++ + HG
Sbjct: 453 DLLGRAGLLQEARELIKMMVVEPNVVVWGALLSACSIHG 491
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 184/535 (34%), Positives = 297/535 (55%), Gaps = 50/535 (9%)
Query: 80 DVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALR 139
++ +AR FD+MPER+VVSW AM+SGYAQNGY + A +F M N +++ L
Sbjct: 126 NLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK----NSISWNGMLA 181
Query: 140 ACARMRWLQGGR---------------------MIQGSIQKGRFVE--NLFVK------- 169
A ++Q GR M+ G +++ R V+ +F +
Sbjct: 182 A-----YVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEV 236
Query: 170 --SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
+ ++ YA+ G + +A LFE +DV +W AM+ G G D++ +F M +
Sbjct: 237 SWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEK- 295
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
+ + +I+ G ++ ++ Q +L + ++ + ++I YA+ G I A
Sbjct: 296 ---NSVSWNAII---AGYVQCKRMDQARELFEAMPCQNVSSWN-TMITGYAQNGDIAQAR 348
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
+ M + D IS A+I+G+A+ + +EA LF +M ++ L+ CA +
Sbjct: 349 NFFDRMPQRDSISWAAIIAGYAQS-GYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEI 407
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI 407
A+L LG+Q+H K VGNAL+ MY K G I DA F+ + +K V+SW ++I
Sbjct: 408 AALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMI 467
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRI 467
AGYA+HG+G EA+ L++ MK G++P+DVT + +L ACSHTGL +G E F M Y I
Sbjct: 468 AGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGI 527
Query: 468 LPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAAR 527
++H++C++DL R G+L+ A N+++ M +P A+ W A+LGA I+GNT LGE AA+
Sbjct: 528 TANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAK 587
Query: 528 NLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+F+MEP+ S YV+LSN+Y A+G W + + R M +R ++K PGYS+++ K
Sbjct: 588 MIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNK 642
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/237 (38%), Positives = 139/237 (58%), Gaps = 2/237 (0%)
Query: 71 VIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
+I YA+ GD+ AR FDRMP+R+ +SW A+I+GYAQ+GY E AL +F M R G R N
Sbjct: 334 MITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLN 393
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE 190
+ T++S L CA + L+ G+ + G + K +V +ALL +Y KCG I+DA+I+FE
Sbjct: 394 RSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFE 453
Query: 191 RIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELM 249
IE K+VVSWN MI G A GF ++ LF SM + G+ PD T+ +L A S G+
Sbjct: 454 GIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDK 513
Query: 250 KISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALI 305
+ + G+ +++K +ID+ + G + A L ++M + D + AL+
Sbjct: 514 GTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALL 570
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 200/386 (51%), Gaps = 26/386 (6%)
Query: 71 VIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
+I YA+ G++L A++ F+ P R+V +WTAM+SGY QNG + A VF M N
Sbjct: 241 MISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGM----PEKN 296
Query: 131 QFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILF 189
++++ + ++Q RM Q + + +N+ + ++ YA+ G I A F
Sbjct: 297 SVSWNAIIAG-----YVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFF 351
Query: 190 ERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIE 247
+R+ ++D +SW A+I G A G+ +++ LF M R G + + T S L A + +E
Sbjct: 352 DRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALE 411
Query: 248 LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG 307
L K Q+H ++K GLES + +L+ +Y K G+I AY ++ + + +++S +I+G
Sbjct: 412 LGK--QVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAG 469
Query: 308 FARDDNHSKEAFDLFKDMILKKMGI--DDVILCLMLNICANVASLNLGRQ-IHAFAFKYQ 364
+AR KEA LF+ M KK GI DDV + +L+ C++ ++ G + ++ Y
Sbjct: 470 YAR-HGFGKEALMLFESM--KKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYG 526
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHGYGHEAIELY 423
+ ++ +ID+ ++G + DA M + + +W +L+ HG E E
Sbjct: 527 ITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHG-NTELGEKA 585
Query: 424 KKMKHEGMVPND---VTFLSLLFACS 446
KM E M P++ LS L+A S
Sbjct: 586 AKMIFE-MEPDNSGMYVLLSNLYAAS 610
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 208/452 (46%), Gaps = 39/452 (8%)
Query: 72 IIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQ 131
I + + G SA + F+ MP R+ +SW AMISG N A +F M +
Sbjct: 56 ITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMPTRDL---- 111
Query: 132 FTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER 191
+++ + C R R L+ R++ + + ++ +A+L YA+ G++++A +F+
Sbjct: 112 VSWNVMISGCVRYRNLRAARLLFDQMPE----RDVVSWNAMLSGYAQNGYVKEAKEIFDE 167
Query: 192 IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR-QGMKPDCFTLGSILRASVGGIELMK 250
+ K+ +SWN M+ G +D+ LF S + + +C G + R L+
Sbjct: 168 MPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRN-----RLVD 222
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR 310
I D + + S N ++I YA+ G + A +L+ D+ + TA++SG+ +
Sbjct: 223 ARGIFDRMPERDEVSWN----TMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQ 278
Query: 311 DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA 370
+ EA +F M K + V ++ ++ R++ F+ + +
Sbjct: 279 -NGMLDEARRVFDGMPEK----NSVSWNAIIAGYVQCKRMDQAREL----FEAMPCQNVS 329
Query: 371 VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG 430
N +I YA++G+IA A FD M ++ ISW ++IAGYA+ GYG EA+ L+ +MK +G
Sbjct: 330 SWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDG 389
Query: 431 MVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD-----LFARRG 485
N TF S L C+ G ++ R++ C V ++ + G
Sbjct: 390 ERLNRSTFTSTLSTCAEIAALELGKQVHG------RVVKAGLESGCYVGNALLVMYCKCG 443
Query: 486 QLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
++ AY + + K S W+ ++ + +G
Sbjct: 444 NIDDAYIVFEGIEEKEVVS-WNTMIAGYARHG 474
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 93/186 (50%), Gaps = 2/186 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L+ ST+ S L C + A +H ++ G ES ++ +++ Y K G++ A
Sbjct: 392 LNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIV 451
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F+ + E+ VVSW MI+GYA++G+ + AL++F +M ++G+ + T L AC+ +
Sbjct: 452 FEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLV 511
Query: 148 -QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIG 205
+G Q N + ++DL + G ++DA L + + D +W A++G
Sbjct: 512 DKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLG 571
Query: 206 GLAMQG 211
+ G
Sbjct: 572 ASRIHG 577
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 124/296 (41%), Gaps = 57/296 (19%)
Query: 274 IDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGID 333
I + + G SA +L+ SM + IS A+ISG +D F L + + K D
Sbjct: 56 ITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDK-----FYLARQLFEKMPTRD 110
Query: 334 DVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFD 393
V +M++ C +L R + FD
Sbjct: 111 LVSWNVMISGCVRYRNLRAARLL-----------------------------------FD 135
Query: 394 EMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCE 453
+M +++V+SW ++++GYA++GY EA E++ +M N +++ +L A G +
Sbjct: 136 QMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMP----CKNSISWNGMLAAYVQNGRIED 191
Query: 454 GWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGAC 513
LF + I ++C++ + +R +L A + +M + S W+ +
Sbjct: 192 ARRLFESKADWELI-----SWNCMMGGYVKRNRLVDARGIFDRMPERDEVS-WNTM---- 241
Query: 514 SIYGNTSLGE-LAARNLFDMEPEKSV-NYVVLSNIYTAAGAWDNARKTRKLMEERS 567
I G GE L A+ LF+ P + V + + + Y G D AR+ M E++
Sbjct: 242 -ISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKN 296
>gi|42563517|ref|NP_187185.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546760|sp|Q9MA85.2|PP215_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g05340
gi|332640702|gb|AEE74223.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 658
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 182/543 (33%), Positives = 299/543 (55%), Gaps = 14/543 (2%)
Query: 52 IHAHIITNG-----YESNLHLSTKVI-----IFYAKVGDVLSARKAFDRMPERNVVSWTA 101
+HA II N ++++H + V+ YAK G ++ A K FD MP R+V+S
Sbjct: 67 LHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNI 126
Query: 102 MISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGR 161
+ G+ +N E+ ++ ML SG + T + L C + +MI
Sbjct: 127 VFYGFLRNRETESGFVLLKRMLGSG-GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSG 185
Query: 162 FVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFR 221
+ + + V + L+ Y KCG +F+ + ++V++ A+I GL ++D LF
Sbjct: 186 YDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLF- 244
Query: 222 SMMRQGM-KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKY 280
S+MR+G+ P+ T S L A G +++ QIH L+ K G+ES + +L+D+Y+K
Sbjct: 245 SLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKC 304
Query: 281 GSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLM 340
GSI A+ ++ S + D +S T ++ G A++ + +EA F M+ + ID ++ +
Sbjct: 305 GSIEDAWTIFESTTEVDEVSMTVILVGLAQNGS-EEEAIQFFIRMLQAGVEIDANVVSAV 363
Query: 341 LNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNV 400
L + SL LG+Q+H+ K + S + V N LI+MY+K G++ D+ F M +N
Sbjct: 364 LGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNY 423
Query: 401 ISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTD 460
+SW S+IA +A+HG+G A++LY++M + P DVTFLSLL ACSH GL +G EL +
Sbjct: 424 VSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNE 483
Query: 461 MINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTS 520
M + I PR EH++C++D+ R G L+ A + I + +KP +W A+LGACS +G+T
Sbjct: 484 MKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTE 543
Query: 521 LGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSS 580
+GE AA LF P+ S +++++NIY++ G W KT K M+ + K G S ++
Sbjct: 544 VGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIE 603
Query: 581 KKN 583
K
Sbjct: 604 HKT 606
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 198/395 (50%), Gaps = 15/395 (3%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
D +T +L C + +IHA I +GY+ + + K+I Y K G +S R
Sbjct: 153 FDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGV 212
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD M RNV++ TA+ISG +N E+ L +FS M R V N TY SAL AC+ + +
Sbjct: 213 FDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRI 272
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ I + K L ++SAL+D+Y+KCG IEDAW +FE D VS ++ GL
Sbjct: 273 VEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGL 332
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A G +++ F M++ G++ D + ++L S L Q+H L+IK +
Sbjct: 333 AQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNT 392
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ LI++Y+K G + + ++R M K + +S ++I+ FAR H A L+++M
Sbjct: 393 FVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFAR-HGHGLAALKLYEEMTT 451
Query: 328 KKMGIDDVILCLMLNICANVASLNLGR-------QIHAFAFKYQSSYDAAVGNALIDMYA 380
++ DV +L+ C++V ++ GR ++H + + +IDM
Sbjct: 452 LEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHY------TCIIDMLG 505
Query: 381 KSGEIADANRAFDEMGDK-NVISWTSLIAGYAKHG 414
++G + +A D + K + W +L+ + HG
Sbjct: 506 RAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHG 540
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 166/498 (33%), Positives = 284/498 (57%), Gaps = 7/498 (1%)
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
++F P +V+ IS NG + ALL M+ G Y + L AC R
Sbjct: 10 RSFSSSPN-SVLQTFRPISQLCSNGRLQEALL---EMVMLGPEIGFHCYDALLNACLDKR 65
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
L+ G+ + + K R++ ++++ LL Y KC +EDA + + + K+VVSW AMI
Sbjct: 66 ALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMIS 125
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
+ G + ++ +F MMR KP+ FT ++L + + L QIH LI+K +S
Sbjct: 126 RYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDS 185
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ SL+D+YAK G I A +++ + + D++SCTA+I+G+A+ +EA ++F+ +
Sbjct: 186 HIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQ-LGLDEEALEMFQRL 244
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ M + V +L + +A L+ G+Q H + + + A + N+LIDMY+K G +
Sbjct: 245 QSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNL 304
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV-PNDVTFLSLLFA 444
+ A R FD M ++ ISW +++ GY+KHG G E +EL++ M+ E V P+ VT L++L
Sbjct: 305 SYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSG 364
Query: 445 CSHTGLTCEGWELFTDMI-NKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
CSH + G ++ M+ +Y I P EH+ C+VD+ R G+++ A+ I++M KPTA
Sbjct: 365 CSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTA 424
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
+ ++LGAC ++ + +GE L ++EPE + NYV+LSN+Y +AG W++ R +M
Sbjct: 425 GVLGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSNLYASAGRWEDVNNVRAMM 484
Query: 564 EERSLRKNPGYSFLQSSK 581
++++ K PG S++Q +
Sbjct: 485 MQKAVTKEPGRSWIQHEQ 502
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 132/369 (35%), Positives = 209/369 (56%), Gaps = 4/369 (1%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y +LL C+DK+A R+ +HAH+I Y +L T+++IFY K + ARK D MP
Sbjct: 54 YDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 113
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
E+NVVSWTAMIS Y+Q G+ AL VF+ M+RS + N+FT+++ L +C R L G+
Sbjct: 114 EKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQ 173
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF 212
I G I K + ++FV S+LLD+YAK G IE+A +FE + +DVVS A+I G A G
Sbjct: 174 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGL 233
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS 272
++++ +F+ + +GM+P+ T S+L A G L Q H +++ L L S
Sbjct: 234 DEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNS 293
Query: 273 LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI-LKKMG 331
LID+Y+K G++ A +L+ +M + IS A++ G+++ +E +LF+ M K++
Sbjct: 294 LIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSK-HGLGREVLELFRLMRDEKRVK 352
Query: 332 IDDVILCLMLNICANVASLNLGRQIH--AFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
D V L +L+ C++ + G I+ A +Y D ++DM ++G I +A
Sbjct: 353 PDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAF 412
Query: 390 RAFDEMGDK 398
M K
Sbjct: 413 EFIKRMPSK 421
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 146/266 (54%), Gaps = 5/266 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ ++L CI IH I+ Y+S++ + + ++ YAK G + AR+ F+ +
Sbjct: 154 TFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECL 213
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
PER+VVS TA+I+GYAQ G DE AL +F + G+R N TY+S L A + + L G+
Sbjct: 214 PERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGK 273
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ + ++++L+D+Y+KCG + A LF+ + + +SWNAM+ G + G
Sbjct: 274 QAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHG 333
Query: 212 FNDDSFWLFRSMM-RQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLII--KLGLESSN 267
+ LFR M + +KPD TL ++L S G +E +S I+D ++ + G++
Sbjct: 334 LGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLS-IYDGMVAGEYGIKPDT 392
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ G ++D+ + G I A++ + M
Sbjct: 393 EHYGCIVDMLGRAGRIDEAFEFIKRM 418
>gi|296082238|emb|CBI21243.3| unnamed protein product [Vitis vinifera]
Length = 778
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 175/549 (31%), Positives = 299/549 (54%), Gaps = 10/549 (1%)
Query: 34 MSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPE 93
++L++ C+ +A + +HA I+ + HL T +I YA +G + A F
Sbjct: 8 IALIKQCVTLEALKS---LHASILKSHLHP--HLCTSLIAQYASLGSISHAYALFSTSHS 62
Query: 94 RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMI 153
NV W +I ++ + N+L ++S ML+ G++A FT+ L+AC + + G
Sbjct: 63 SNVFLWNHIIRAFSNTPHSRNSLRLYSRMLQLGIQATNFTFPFLLKACGCLADFELGARA 122
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN 213
+ + ++FV ++L+ +Y + G + + +FER+ ++VVSW++M+G A G
Sbjct: 123 HAHVVVFGYESDVFVANSLMAMYGRFGCFDFSRQVFERMPERNVVSWSSMVGAYAHNGRY 182
Query: 214 DDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSL 273
++ LF M+ +G+ P+ GSI+ A + ++I GL+S + +
Sbjct: 183 EEGLLLFWRMLNEGIAPN---RGSIVNAMACIHREHEADDFCRVVIDNGLDSDQSVQNAA 239
Query: 274 IDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGID 333
+ +YA+ G I A + + +L D+++ T++I + + D A +LFK M L + D
Sbjct: 240 MGMYARCGRIDVARRFFYGILDKDLVAWTSMIEAYVQADL-PINALELFKQMKLLGIVPD 298
Query: 334 DVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFD 393
V L +++ +N+AS L R +H + A+ A+ID+Y K G + A + FD
Sbjct: 299 SVTLLSLIHAVSNLASFQLARFVHGVITRSFFKNHIALDTAVIDLYVKCGNLEYARKCFD 358
Query: 394 EMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCE 453
M +N+ISW+++I+GY HG+G EA+ L+ +MK + P+ + F+ +L ACSH GL E
Sbjct: 359 RMSARNLISWSTMISGYGMHGHGREALCLFDQMK-ASIKPDHIAFVMVLSACSHGGLIAE 417
Query: 454 GWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGAC 513
GWE F M + + PR EH++C+VDL R G+L A I +M I P A +W A+LGAC
Sbjct: 418 GWECFKAMNRDFGVTPRTEHYACMVDLLGRAGRLSEAQAFIERMPITPDAGVWGALLGAC 477
Query: 514 SIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPG 573
I+ N E AAR+LF+++ E Y++LSNIY ++G A R LM+ R +RK G
Sbjct: 478 RIHSNLETAETAARHLFNLDAENPGRYILLSNIYASSGKRKEADDIRALMKSRGVRKTVG 537
Query: 574 YSFLQSSKK 582
++ ++ K
Sbjct: 538 HTIIEIKNK 546
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 12 QLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKV 71
+L + +K PD++ T +SL+ + + + A +H I + +++++ L T V
Sbjct: 285 ELFKQMKLLGIVPDSV----TLLSLIHAVSNLASFQLARFVHGVITRSFFKNHIALDTAV 340
Query: 72 IIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQ 131
I Y K G++ ARK FDRM RN++SW+ MISGY +G+ AL +F M ++ ++ +
Sbjct: 341 IDLYVKCGNLEYARKCFDRMSARNLISWSTMISGYGMHGHGREALCLFDQM-KASIKPDH 399
Query: 132 FTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK------SALLDLYAKCGWIEDA 185
+ L AC+ GG + +G + V + ++DL + G + +A
Sbjct: 400 IAFVMVLSACS-----HGGLIAEGWECFKAMNRDFGVTPRTEHYACMVDLLGRAGRLSEA 454
Query: 186 WILFERIE-RKDVVSWNAMIG 205
ER+ D W A++G
Sbjct: 455 QAFIERMPITPDAGVWGALLG 475
>gi|223948379|gb|ACN28273.1| unknown [Zea mays]
Length = 648
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 175/516 (33%), Positives = 287/516 (55%), Gaps = 9/516 (1%)
Query: 74 FYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA--NQ 131
Y K G++ A + F M +RNVVSWTA++ G+ ++G D L +R+ A N+
Sbjct: 1 MYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHG-DATGCLRLLGEMRTASEAAPNE 59
Query: 132 FTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER 191
+T S++L+AC + G I G + + E+ V S+L+ +Y+K G I DA +F+
Sbjct: 60 YTLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDG 119
Query: 192 IE-RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ--GMKPDCFTLGSILRASVGGIEL 248
+ +WNAM+ G A G D+ +FR M R +PD FT S+L+A G
Sbjct: 120 AGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGAT 179
Query: 249 MKISQIHDLIIKLGLESSNK--LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
+ +Q+H + G +++ L G+L+D+Y K + A Q++ + + ++I TA++
Sbjct: 180 REGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVV 239
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
G A++ EA +LF+ D +L ++ + A+ A + GRQ+H + K +
Sbjct: 240 GHAQE-GQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTG 298
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
D + GN+++DMY K G +A R F EM NV+SWT+++ G KHG G EA+ L+++M
Sbjct: 299 TDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEM 358
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
+ G+ P++VT+L+LL ACSH GL E F+ + + P+AEH++C+VDL R G+
Sbjct: 359 RAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGE 418
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
L A ++IR M ++PT +W +L AC ++ + ++G A L M+ + VNYV LSN+
Sbjct: 419 LREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNV 478
Query: 547 YTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
AG W K R M R L+K G S+++ K+
Sbjct: 479 LAEAGEWRECHKVRDAMRRRGLKKQGGCSWVEVGKE 514
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 202/401 (50%), Gaps = 12/401 (2%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP-ERNVVSWTAMISGYAQNG 110
IH + GY+ + +++ +++ Y+K G + AR+ FD + +W AM+SGYA G
Sbjct: 81 IHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAG 140
Query: 111 YDENALLVFSAMLR--SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRF--VENL 166
+ +ALLVF M R + ++FT++S L+AC+ + + G + ++ F N
Sbjct: 141 HGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNA 200
Query: 167 FVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ 226
+ AL+D+Y KC + A +FER+ERK+V+ W A++ G A +G ++ LFR R
Sbjct: 201 ILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRS 260
Query: 227 GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSA 286
G +PD L S++ + + Q+H IK + S++D+Y K G A
Sbjct: 261 GARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEA 320
Query: 287 YQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICAN 346
+++R M +++S T +++G + +EA LF++M + D+V +L+ C++
Sbjct: 321 ERMFREMRAPNVVSWTTMVNGLGK-HGLGREAVALFEEMRAGGVEPDEVTYLALLSACSH 379
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNA-LIDMYAKSGEIADANRAFDEMG-DKNVISWT 404
++ R+ + + ++ A A ++D+ ++GE+ +A M + V W
Sbjct: 380 AGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQ 439
Query: 405 SLIAGYAKH---GYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
+L++ H G EA ++ M + V N VT ++L
Sbjct: 440 TLLSACRVHKDVAVGREAGDVLLAMDGDNPV-NYVTLSNVL 479
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 129/268 (48%), Gaps = 3/268 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYE--SNLHLSTKVIIFYAKVGDVLSARK 86
D T+ SLL+ C A R+ +HA + +G+ SN L+ ++ Y K + A +
Sbjct: 162 DEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQ 221
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
F+R+ +NV+ WTA++ G+AQ G AL +F RSG R + SS + A
Sbjct: 222 VFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFAL 281
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
++ GR + K ++ ++++D+Y KCG ++A +F + +VVSW M+ G
Sbjct: 282 VEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNG 341
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIK-LGLES 265
L G ++ LF M G++PD T ++L A + + + I + +
Sbjct: 342 LGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRP 401
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ ++D+ + G +R A L R+M
Sbjct: 402 KAEHYACMVDLLGRAGELREARDLIRTM 429
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 12/210 (5%)
Query: 3 IVRANFKTGQLKQALKF------SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHI 56
+V + + GQ+ +AL+ S + PD+ + S L F + + Q +H +
Sbjct: 237 VVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVE----QGRQVHCYG 292
Query: 57 ITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENAL 116
I + +++ ++ Y K G A + F M NVVSWT M++G ++G A+
Sbjct: 293 IKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAV 352
Query: 117 LVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA-LLDL 175
+F M GV ++ TY + L AC+ + R I++ R V A ++DL
Sbjct: 353 ALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDL 412
Query: 176 YAKCGWIEDAWILFERIERKDVVS-WNAMI 204
+ G + +A L + + V W ++
Sbjct: 413 LGRAGELREARDLIRTMPMEPTVGVWQTLL 442
>gi|6729044|gb|AAF27040.1|AC009177_30 hypothetical protein [Arabidopsis thaliana]
Length = 770
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 182/543 (33%), Positives = 299/543 (55%), Gaps = 14/543 (2%)
Query: 52 IHAHIITNG-----YESNLHLSTKVI-----IFYAKVGDVLSARKAFDRMPERNVVSWTA 101
+HA II N ++++H + V+ YAK G ++ A K FD MP R+V+S
Sbjct: 67 LHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNI 126
Query: 102 MISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGR 161
+ G+ +N E+ ++ ML SG + T + L C + +MI
Sbjct: 127 VFYGFLRNRETESGFVLLKRMLGSG-GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSG 185
Query: 162 FVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFR 221
+ + + V + L+ Y KCG +F+ + ++V++ A+I GL ++D LF
Sbjct: 186 YDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLF- 244
Query: 222 SMMRQGM-KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKY 280
S+MR+G+ P+ T S L A G +++ QIH L+ K G+ES + +L+D+Y+K
Sbjct: 245 SLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKC 304
Query: 281 GSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLM 340
GSI A+ ++ S + D +S T ++ G A++ + +EA F M+ + ID ++ +
Sbjct: 305 GSIEDAWTIFESTTEVDEVSMTVILVGLAQNGS-EEEAIQFFIRMLQAGVEIDANVVSAV 363
Query: 341 LNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNV 400
L + SL LG+Q+H+ K + S + V N LI+MY+K G++ D+ F M +N
Sbjct: 364 LGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNY 423
Query: 401 ISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTD 460
+SW S+IA +A+HG+G A++LY++M + P DVTFLSLL ACSH GL +G EL +
Sbjct: 424 VSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNE 483
Query: 461 MINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTS 520
M + I PR EH++C++D+ R G L+ A + I + +KP +W A+LGACS +G+T
Sbjct: 484 MKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTE 543
Query: 521 LGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSS 580
+GE AA LF P+ S +++++NIY++ G W KT K M+ + K G S ++
Sbjct: 544 VGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIE 603
Query: 581 KKN 583
K
Sbjct: 604 HKT 606
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 198/395 (50%), Gaps = 15/395 (3%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
D +T +L C + +IHA I +GY+ + + K+I Y K G +S R
Sbjct: 153 FDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGV 212
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD M RNV++ TA+ISG +N E+ L +FS M R V N TY SAL AC+ + +
Sbjct: 213 FDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRI 272
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ I + K L ++SAL+D+Y+KCG IEDAW +FE D VS ++ GL
Sbjct: 273 VEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGL 332
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A G +++ F M++ G++ D + ++L S L Q+H L+IK +
Sbjct: 333 AQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNT 392
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ LI++Y+K G + + ++R M K + +S ++I+ FAR H A L+++M
Sbjct: 393 FVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFAR-HGHGLAALKLYEEMTT 451
Query: 328 KKMGIDDVILCLMLNICANVASLNLGR-------QIHAFAFKYQSSYDAAVGNALIDMYA 380
++ DV +L+ C++V ++ GR ++H + + +IDM
Sbjct: 452 LEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHY------TCIIDMLG 505
Query: 381 KSGEIADANRAFDEMGDK-NVISWTSLIAGYAKHG 414
++G + +A D + K + W +L+ + HG
Sbjct: 506 RAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHG 540
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 196/563 (34%), Positives = 311/563 (55%), Gaps = 16/563 (2%)
Query: 28 LDPSTYMSLLQ-FCIDKKAE----RQAHLIHAHIITNG-YESNLHLSTKVIIFYAKVGDV 81
+ P +Y+ LL F AE ++ +H H+IT G + + + ++ YAK G +
Sbjct: 306 VSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSI 365
Query: 82 LSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC 141
AR+ F M +++ VSW +MI+G QNG A+ + +M R + FT S+L +C
Sbjct: 366 ADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSC 425
Query: 142 ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN 201
A ++W + G+ I G K N+ V +AL+ LYA+ G++ + +F + D VSWN
Sbjct: 426 ASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWN 485
Query: 202 AMIGGLAMQGFN-DDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI--ELMKISQIHDLI 258
++IG LA + ++ F + R G K + T S+L A EL K QIH L
Sbjct: 486 SIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGK--QIHGLA 543
Query: 259 IKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML-KTDIISCTALISGFARDDNHSKE 317
+K + +LI Y K G + +++ M + D ++ ++ISG+ ++ +K
Sbjct: 544 LKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAK- 602
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
A DL M+ +D + +L+ A+VA+L G ++HA + + D VG+AL+D
Sbjct: 603 ALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVD 662
Query: 378 MYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND-V 436
MY+K G + A R F+ M +N SW S+I+GYA+HG G EA++L++ MK +G P D V
Sbjct: 663 MYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHV 722
Query: 437 TFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQ 496
TF+ +L ACSH GL EG++ F M + Y + PR EHFSC+ D+ R G+L+ + I +
Sbjct: 723 TFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEK 782
Query: 497 MNIKPTASLWSAILGACSIYG--NTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWD 554
M +KP +W +LGAC LG+ AA LF +EPE +VNYV+L N+Y A G W+
Sbjct: 783 MPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWE 842
Query: 555 NARKTRKLMEERSLRKNPGYSFL 577
+ K RK M++ ++K GYS++
Sbjct: 843 DLVKARKKMKDADVKKEAGYSWV 865
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 147/490 (30%), Positives = 242/490 (49%), Gaps = 17/490 (3%)
Query: 34 MSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPE 93
+S +Q C+ + A H+ + N + +++L +I Y + GD +SARK FD MP
Sbjct: 7 LSFVQSCVGHRG--AARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64
Query: 94 RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR--WLQGGR 151
RN VSW ++SGY++NG + AL+ M++ G+ +NQ+ + S LRAC + + GR
Sbjct: 65 RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGR 124
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKC-GWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
I G + K + + V + L+ +Y KC G + A F IE K+ VSWN++I +
Sbjct: 125 QIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQA 184
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIE--LMKISQIHDLIIKLGLESSNK 268
G +F +F SM G +P +T GS++ + E + + QI I K GL +
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLF 244
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ L+ +AK GS+ A +++ M + ++ L+ G R +EA LF DM
Sbjct: 245 VGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVR-QKWGEEATKLFMDMN-S 302
Query: 329 KMGIDDVILCLMLN-----ICANVASLNLGRQIHAFAFKYQ-SSYDAAVGNALIDMYAKS 382
+ + ++L+ A L GR++H + +GN L++MYAK
Sbjct: 303 MIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKC 362
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
G IADA R F M DK+ +SW S+I G ++G EA+E YK M+ ++P T +S L
Sbjct: 363 GSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSL 422
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
+C+ G ++ + + K I + ++ L+A G L + M
Sbjct: 423 SSCASLKWAKLGQQIHGESL-KLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQ 481
Query: 503 ASLWSAILGA 512
S W++I+GA
Sbjct: 482 VS-WNSIIGA 490
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 199/418 (47%), Gaps = 11/418 (2%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
D L T +S L C K + IH + G + N+ +S ++ YA+ G +
Sbjct: 410 DILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNEC 469
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYD-ENALLVFSAMLRSGVRANQFTYSSALRACAR 143
RK F MPE + VSW ++I A++ A++ F R+G + N+ T+SS L A +
Sbjct: 470 RKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSS 529
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI-ERKDVVSWNA 202
+ + + G+ I G K + ++AL+ Y KCG ++ +F R+ ER+D V+WN+
Sbjct: 530 LSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNS 589
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
MI G + L M++ G + D F ++L A L + ++H ++
Sbjct: 590 MISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRAC 649
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
LES + +L+D+Y+K G + A + + +M + S ++ISG+AR +EA LF
Sbjct: 650 LESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYAR-HGQGEEALKLF 708
Query: 323 KDMILK-KMGIDDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDAAVGNALIDMYA 380
+ M L + D V +L+ C++ L G + + + Y + + + D+
Sbjct: 709 ETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLG 768
Query: 381 KSGEIADANRAFDEMGDK-NVISWTSLI-----AGYAKHGYGHEAIELYKKMKHEGMV 432
++GE+ ++M K NV+ W +++ A K G +A E+ +++ E V
Sbjct: 769 RAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAV 826
>gi|15217470|ref|NP_177298.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169716|sp|Q9C9H9.1|PP114_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g71420
gi|12323734|gb|AAG51830.1|AC016163_19 hypothetical protein; 56014-58251 [Arabidopsis thaliana]
gi|332197078|gb|AEE35199.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 745
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 193/593 (32%), Positives = 318/593 (53%), Gaps = 24/593 (4%)
Query: 4 VRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGY-- 61
+R ++G +++A+ S P L Y +L Q C +++ +H H++++ Y
Sbjct: 33 LRTLVRSGDIRRAVSLFYSAPVELQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCY 92
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSA 121
N+ L+ +I YAK G++L AR+ FD MPERNVVSWTA+I+GY Q G ++ +FS+
Sbjct: 93 SQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSS 152
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC-- 179
ML S N+FT SS L +C + G+ + G K +++V +A++ +Y +C
Sbjct: 153 ML-SHCFPNEFTLSSVLTSCR----YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHD 207
Query: 180 -GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
+AW +FE I+ K++V+WN+MI + +F M G+ D TL +I
Sbjct: 208 GAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNI 267
Query: 239 LRASVGGIELM--KIS----QIHDLIIKLGLESSNKLTGSLIDVYAK-YGSIRSAYQLYR 291
+ +L+ ++S Q+H L +K GL + ++ +LI VY++ Y+L+
Sbjct: 268 CSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFM 327
Query: 292 SMLKT-DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
M DI++ +I+ FA D + A LF + +K+ D +L CA + +
Sbjct: 328 EMSHCRDIVAWNGIITAFAVYD--PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTA 385
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
IHA K D + N+LI YAK G + R FD+M ++V+SW S++ Y
Sbjct: 386 RHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAY 445
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
+ HG + +++KM + P+ TF++LL ACSH G EG +F M K LP+
Sbjct: 446 SLHGQVDSILPVFQKMD---INPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQ 502
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
H++CV+D+ +R + A +I+QM + P A +W A+LG+C +GNT LG+LAA L
Sbjct: 503 LNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLK 562
Query: 531 DM-EPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
++ EP S++Y+ +SNIY A G+++ A + K ME +RK P S+ + K
Sbjct: 563 ELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNK 615
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 189/611 (30%), Positives = 303/611 (49%), Gaps = 61/611 (9%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDV------- 81
DP ++ S+++ C R A +HA + G+ + V+ Y K GDV
Sbjct: 145 DPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVF 204
Query: 82 ------------------------LSARKAFDRMPERNVVSWTAMISGYAQNGYDENALL 117
A + F+RMPER+ VSW +IS ++Q+G+ L
Sbjct: 205 FDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLA 264
Query: 118 VFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYA 177
+F M G N TY S L ACA L+ G + I + +L + L+D+YA
Sbjct: 265 MFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYA 324
Query: 178 KCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGS 237
KCG ++ A +F+ + D +SWN++I G+ G +D+ LF M R + D F L +
Sbjct: 325 KCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPT 384
Query: 238 ILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
IL G +H IK G+ SS + ++I +YAK G A ++R M +
Sbjct: 385 ILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRN 444
Query: 298 IISCTALISGFAR------------------------------DDNHSKEAFDLFKDMIL 327
IS TA+I+ F+R + S+E L+ M
Sbjct: 445 TISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRS 504
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ D + + CA++A + LG Q+ A K+ S + +V N+++ MY++ G I +
Sbjct: 505 NGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKE 564
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A FD + DK++ISW +++A +A++G G + I+ ++ M PN ++++S+L CSH
Sbjct: 565 AKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSH 624
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
GL EG F M + I P EHFSC+VDL R G LE A ++I M KP A++WS
Sbjct: 625 MGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWS 684
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
A+LG+C ++ + L E AA+ L +++ E S YV+LSN+Y+ +G DN RKLM+ +
Sbjct: 685 ALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGELDNVADMRKLMKVKG 744
Query: 568 LRKNPGYSFLQ 578
+R + G S+++
Sbjct: 745 IRTSRGCSWIE 755
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 136/497 (27%), Positives = 233/497 (46%), Gaps = 71/497 (14%)
Query: 84 ARKAFDRMPER--NVVSWTAMISGYAQNGYDENALLVFSAMLRS----GVRANQFTYSSA 137
A K FD MP R + VSWT MISGY+QNG+ + FS M+R G + F+++S
Sbjct: 93 AEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSV 152
Query: 138 LRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDV 197
++AC + + + + K F ++++++ +Y KCG ++ A +F IER +
Sbjct: 153 MKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSL 212
Query: 198 VSWNAMIGGL--------AMQGFN-----DDSFW------------------LFRSMMRQ 226
WN+MI G A+Q FN D+ W +F M Q
Sbjct: 213 FCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQ 272
Query: 227 GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSA 286
G P+ T GS+L A +L + +H I+++ LID+YAK G + A
Sbjct: 273 GFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLA 332
Query: 287 YQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICAN 346
++++S+ + D IS +LI+G ++A LF M + +D+ IL +L +C+
Sbjct: 333 KRVFKSLREHDHISWNSLITGVVH-FGLGEDALILFNQMRRSSVVLDEFILPTILGVCSG 391
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK------------------------- 381
+ G +H + K A VGNA+I MYAK
Sbjct: 392 PDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAM 451
Query: 382 ------SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND 435
SG+I A FD M ++N+++W S+++ Y ++G+ E ++LY M+ G+ P+
Sbjct: 452 ITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDW 511
Query: 436 VTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIR 495
+TF + + AC+ + G ++ T K+ + + +V +++R G ++ A N
Sbjct: 512 ITFTTSIRACADLAIVKLGMQVVTHA-TKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFD 570
Query: 496 QMNIKPTASLWSAILGA 512
++ K S W+A+L A
Sbjct: 571 SIDDKDLIS-WNAMLAA 586
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 184/434 (42%), Gaps = 79/434 (18%)
Query: 175 LYAKCGWIEDAWILFER---------------------------------IERKDVVSWN 201
+Y+ CG DA+ +F+ + KD VSW
Sbjct: 52 MYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWT 111
Query: 202 AMIGGLAMQGFNDDSFWLFRSMMRQ----GMKPDCFTLGSILRA--SVGGIELMKISQIH 255
MI G + GF+ SF F M+R G D F+ S+++A S+G L Q+H
Sbjct: 112 TMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAI--QLH 169
Query: 256 DLIIKLGLESSNKLTGSLIDVYAKYGSIR------------------------------- 284
L+ KLG + S++ +Y K G +
Sbjct: 170 ALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPY 229
Query: 285 SAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNIC 344
A Q++ M + D +S LIS F++ + +F +M + + + +L+ C
Sbjct: 230 KALQIFNRMPERDEVSWNTLISIFSQ-HGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSAC 288
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWT 404
A+ + L G +HA + + S D GN LIDMYAK G + A R F + + + ISW
Sbjct: 289 ASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWN 348
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK 464
SLI G G G +A+ L+ +M+ +V ++ ++L CS G EL K
Sbjct: 349 SLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTG-ELLHGYTIK 407
Query: 465 YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGEL 524
+ A + ++ ++A+ G + A + R M ++ T S W+A++ A S G+
Sbjct: 408 SGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTIS-WTAMITAFSRSGDIG---- 462
Query: 525 AARNLFDMEPEKSV 538
AR FDM PE+++
Sbjct: 463 KARGYFDMMPERNI 476
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 97/202 (48%), Gaps = 6/202 (2%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ G ++ LK +S + P T+ + ++ C D + + H G N+
Sbjct: 488 QNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVS 547
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
++ ++ Y++ G + A+ FD + +++++SW AM++ +AQNG + F ML++
Sbjct: 548 VANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTE 607
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQK--GRFVENLFVKSALLDLYAKCGWIED 184
+ N +Y S L C+ M + G+ S+ + G N S ++DL + G +E
Sbjct: 608 CKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHF-SCMVDLLGRAGLLEQ 666
Query: 185 AWILFERIE-RKDVVSWNAMIG 205
A L E + + + W+A++G
Sbjct: 667 AKDLIEGMPFKPNATVWSALLG 688
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 157/472 (33%), Positives = 279/472 (59%), Gaps = 2/472 (0%)
Query: 107 AQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENL 166
+++ DE+ + + S + ++ Y++ L+ C + L GR++ G + + F +L
Sbjct: 27 SEDSDDESLKFPSNDLEGSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDL 86
Query: 167 FVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ 226
+ + LL++YAKCG +E+A +F+++ +D V+W +I G + D+ LF M+R
Sbjct: 87 VMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRF 146
Query: 227 GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSA 286
G P+ FTL S+++A+ Q+H +K G +S+ + +L+D+Y +YG + A
Sbjct: 147 GFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDA 206
Query: 287 YQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICAN 346
++ ++ + +S ALI+G AR +++A +LF+ M+ + + C++
Sbjct: 207 QLVFDALESRNDVSWNALIAGHARRCG-TEKALELFQGMLREGFRPSHFSYASLFGACSS 265
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
L G+ +HA+ K A GN L+DMYAKSG I DA + FD + ++V+SW SL
Sbjct: 266 TGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSL 325
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYR 466
+ YA+HG+G+EA+ +++M+ G+ PN+++FLS+L ACSH+GL EGW + +++ K
Sbjct: 326 LTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYY-ELMKKDG 384
Query: 467 ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAA 526
I+ A H+ +VDL R G L A I +M I+PTA++W A+L AC ++ NT LG AA
Sbjct: 385 IVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAA 444
Query: 527 RNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
++F+++P+ +V+L NIY + G W++A + RK M+E ++K P S+++
Sbjct: 445 EHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVE 496
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 209/387 (54%), Gaps = 2/387 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D Y +LL+ C K Q ++H H+I + + +L ++ ++ YAK G + ARK
Sbjct: 49 VDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKV 108
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD+MPER+ V+WT +ISGY+Q+ +AL++F+ MLR G N+FT SS ++A A R
Sbjct: 109 FDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRG 168
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G + G K F N+ V SALLDLY + G ++DA ++F+ +E ++ VSWNA+I G
Sbjct: 169 CCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGH 228
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A + + + LF+ M+R+G +P F+ S+ A L + +H +IK G +
Sbjct: 229 ARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA 288
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+L+D+YAK GSI A +++ + K D++S +L++ +A+ EA F++M
Sbjct: 289 FAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQ-HGFGNEAVCWFEEMRR 347
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ +++ +L C++ L+ G + K +A ++D+ ++G++
Sbjct: 348 GGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNR 407
Query: 388 ANRAFDEMG-DKNVISWTSLIAGYAKH 413
A R +EM + W +L+ H
Sbjct: 408 ALRFIEEMPIEPTAAIWKALLNACRMH 434
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 188/587 (32%), Positives = 305/587 (51%), Gaps = 38/587 (6%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYA--KVGDVLS 83
L+ + +SLL+ C ++ IHA +I+ G S+ ++++ F A + ++
Sbjct: 50 VLIQSNPLLSLLEACTSMAKMKE---IHAQMISTGLISDGFALSRLVAFCAISEWRNLDY 106
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG-VRANQFTYSSALRACA 142
K + N SW I GY ++ NA+L++ MLR G + +TY + CA
Sbjct: 107 CDKILNNAANLNXFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCA 166
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
I G + + F +LFV +A++ + CG + A LF+ +D+VSWN+
Sbjct: 167 GFSLSWTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNS 226
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
+I G G D++F L+ M + PD T+ ++ AS L ++H I ++G
Sbjct: 227 IINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMG 286
Query: 263 LESSNKLTGSLIDVY-------------------------------AKYGSIRSAYQLYR 291
L + L +L+D+Y AK+G + SA +L+
Sbjct: 287 LNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFN 346
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
M + D++ ALI GF + SKEA LF +M + D + + L+ C+ + +L+
Sbjct: 347 EMPEKDVVLWNALIGGFVQA-KRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALD 405
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
+G +H + K+ + + A+G AL+DMYAK G I A + F+EM +N ++WT++I G A
Sbjct: 406 VGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLA 465
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
HG H AI + +M G+VP+++TF+ +L AC H GL +G + F M +KY I P+
Sbjct: 466 LHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKL 525
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
+H+SC+VDL R G LE A +IR M +P A +W A+ I+GN +GE AA L +
Sbjct: 526 KHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLE 585
Query: 532 MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
++P YV+L+N+Y A W+ ARK RK+MEER + K PG S ++
Sbjct: 586 LDPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIE 632
>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 813
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 186/558 (33%), Positives = 310/558 (55%), Gaps = 8/558 (1%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGY-ESNLHLSTKVIIFYAKVGDVL 82
P D T +S+L C + + + A ++H + + G ++ + ++ Y K G
Sbjct: 234 PGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEK 293
Query: 83 SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA 142
+++K FD + ERNV+SW A+I+ ++ G +AL VF M+ G+R N T SS L
Sbjct: 294 ASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLG 353
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
+ + G + G K ++F+ ++L+D+YAK G A +F ++ +++VSWNA
Sbjct: 354 ELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNA 413
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS--VGGIELMKISQIHDLIIK 260
MI A ++ L R M +G P+ T ++L A +G + + K +IH II+
Sbjct: 414 MIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGK--EIHARIIR 471
Query: 261 LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFD 320
+G ++ +L D+Y+K G + A ++ ++ D +S LI G++R N S E+
Sbjct: 472 VGSSLDLFVSNALTDMYSKCGCLNLAQNVFNISVR-DEVSYNILIIGYSRT-NDSLESLR 529
Query: 321 LFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYA 380
LF +M L M D V +++ CAN+A + G++IH + V N+L+D+Y
Sbjct: 530 LFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTHLFVANSLLDLYT 589
Query: 381 KSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
+ G I A + F + +K+V SW ++I GY G AI L++ MK +G+ + V+F++
Sbjct: 590 RCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYDSVSFVA 649
Query: 441 LLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIK 500
+L ACSH GL +G + F M+ I P H++C+VDL R G +E A ++IR ++I
Sbjct: 650 VLSACSHGGLIEKGRKYF-KMMCDLNIEPTHTHYACMVDLLGRAGLMEEAADLIRGLSII 708
Query: 501 PTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTR 560
P ++W A+LGAC I+GN LG AA +LF+++P+ Y++LSN+Y A WD A K R
Sbjct: 709 PDTNIWGALLGACRIHGNIELGLWAAEHLFELKPQHCGYYILLSNMYAEAERWDEANKVR 768
Query: 561 KLMEERSLRKNPGYSFLQ 578
+LM+ R +KNPG S++Q
Sbjct: 769 ELMKSRGAKKNPGCSWVQ 786
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 144/492 (29%), Positives = 260/492 (52%), Gaps = 14/492 (2%)
Query: 10 TGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGY-ESNLHLS 68
T L + FS S T L S +LLQ C Q +HA+ + +G+ ++ L
Sbjct: 15 TTPLTKNTHFS-SFFSTSLQTSNPPNLLQLCTLCDTLSQTKQVHAYSLLHGFLPRSVSLC 73
Query: 69 TKVIIFYAKVGDVLSARKAFDRMP--ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+I+ YA G ++ F R+ W +I + G + ++ M+R+G
Sbjct: 74 ASLILQYASFGHPSNSLLLFQHSVAYSRSAFLWNTLIRANSIAGVFD-GFGTYNTMVRAG 132
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
V+ ++ TY L+ C+ ++ GR + G K F ++FV + LL Y CG DA
Sbjct: 133 VKPDECTYPFVLKVCSDFVEVRKGREVHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAM 192
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMM--RQGMKPDCFTLGSILRASVG 244
+F+ + +D VSWN +IG ++ GF +++ FR M+ + G++PD T+ S+L
Sbjct: 193 KVFDEMPERDKVSWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAE 252
Query: 245 GIELMKISQIHDLIIKLGLESSN-KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTA 303
+ + +H +K+GL + K+ +L+DVY K GS +++ +++ + + ++IS A
Sbjct: 253 TEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVISWNA 312
Query: 304 LISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY 363
+I+ F+ + +A D+F+ MI + M + V + ML + + LG ++H F+ K
Sbjct: 313 IITSFSFRGKY-MDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKM 371
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELY 423
D + N+LIDMYAKSG A+ F++MG +N++SW ++IA +A++ +EA+EL
Sbjct: 372 AIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELV 431
Query: 424 KKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF--SCVVDLF 481
++M+ +G PN+VTF ++L AC+ G G E+ +I R+ + F + + D++
Sbjct: 432 RQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHARII---RVGSSLDLFVSNALTDMY 488
Query: 482 ARRGQLESAYNM 493
++ G L A N+
Sbjct: 489 SKCGCLNLAQNV 500
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 184/535 (34%), Positives = 297/535 (55%), Gaps = 50/535 (9%)
Query: 80 DVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALR 139
++ +AR FD+MPER+VVSW AM+SGYAQNGY + A +F M N +++ L
Sbjct: 45 NLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK----NSISWNGMLA 100
Query: 140 ACARMRWLQGGR---------------------MIQGSIQKGRFVE--NLFVK------- 169
A ++Q GR M+ G +++ R V+ +F +
Sbjct: 101 A-----YVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEV 155
Query: 170 --SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
+ ++ YA+ G + +A LFE +DV +W AM+ G G D++ +F M +
Sbjct: 156 SWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEK- 214
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
+ + +I+ G ++ ++ Q +L + ++ + ++I YA+ G I A
Sbjct: 215 ---NSVSWNAII---AGYVQCKRMDQARELFEAMPCQNVSSWN-TMITGYAQNGDIAQAR 267
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
+ M + D IS A+I+G+A+ + +EA LF +M ++ L+ CA +
Sbjct: 268 NFFDRMPQRDSISWAAIIAGYAQS-GYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEI 326
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI 407
A+L LG+Q+H K VGNAL+ MY K G I DA F+ + +K V+SW ++I
Sbjct: 327 AALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMI 386
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRI 467
AGYA+HG+G EA+ L++ MK G++P+DVT + +L ACSHTGL +G E F M Y I
Sbjct: 387 AGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGI 446
Query: 468 LPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAAR 527
++H++C++DL R G+L+ A N+++ M +P A+ W A+LGA I+GNT LGE AA+
Sbjct: 447 TANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAK 506
Query: 528 NLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+F+MEP+ S YV+LSN+Y A+G W + + R M +R ++K PGYS+++ K
Sbjct: 507 MIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNK 561
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/237 (38%), Positives = 139/237 (58%), Gaps = 2/237 (0%)
Query: 71 VIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
+I YA+ GD+ AR FDRMP+R+ +SW A+I+GYAQ+GY E AL +F M R G R N
Sbjct: 253 MITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLN 312
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE 190
+ T++S L CA + L+ G+ + G + K +V +ALL +Y KCG I+DA+I+FE
Sbjct: 313 RSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFE 372
Query: 191 RIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELM 249
IE K+VVSWN MI G A GF ++ LF SM + G+ PD T+ +L A S G+
Sbjct: 373 GIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDK 432
Query: 250 KISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALI 305
+ + G+ +++K +ID+ + G + A L ++M + D + AL+
Sbjct: 433 GTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALL 489
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 200/386 (51%), Gaps = 26/386 (6%)
Query: 71 VIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
+I YA+ G++L A++ F+ P R+V +WTAM+SGY QNG + A VF M N
Sbjct: 160 MISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEK----N 215
Query: 131 QFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILF 189
++++ + ++Q RM Q + + +N+ + ++ YA+ G I A F
Sbjct: 216 SVSWNAIIAG-----YVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFF 270
Query: 190 ERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIE 247
+R+ ++D +SW A+I G A G+ +++ LF M R G + + T S L A + +E
Sbjct: 271 DRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALE 330
Query: 248 LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG 307
L K Q+H ++K GLES + +L+ +Y K G+I AY ++ + + +++S +I+G
Sbjct: 331 LGK--QVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAG 388
Query: 308 FARDDNHSKEAFDLFKDMILKKMGI--DDVILCLMLNICANVASLNLGRQ-IHAFAFKYQ 364
+AR KEA LF+ M KK GI DDV + +L+ C++ ++ G + ++ Y
Sbjct: 389 YAR-HGFGKEALMLFESM--KKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYG 445
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHGYGHEAIELY 423
+ ++ +ID+ ++G + DA M + + +W +L+ HG E E
Sbjct: 446 ITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHG-NTELGEKA 504
Query: 424 KKMKHEGMVPND---VTFLSLLFACS 446
KM E M P++ LS L+A S
Sbjct: 505 AKMIFE-MEPDNSGMYVLLSNLYAAS 529
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 93/186 (50%), Gaps = 2/186 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L+ ST+ S L C + A +H ++ G ES ++ +++ Y K G++ A
Sbjct: 311 LNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIV 370
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F+ + E+ VVSW MI+GYA++G+ + AL++F +M ++G+ + T L AC+ +
Sbjct: 371 FEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLV 430
Query: 148 -QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIG 205
+G Q N + ++DL + G ++DA L + + D +W A++G
Sbjct: 431 DKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLG 490
Query: 206 GLAMQG 211
+ G
Sbjct: 491 ASRIHG 496
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 138/280 (49%), Gaps = 26/280 (9%)
Query: 279 KYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILC 338
+Y ++R+A L+ M + D++S A++SG+A+ + + KEA ++F +M K + +
Sbjct: 42 RYRNLRAARLLFDQMPERDVVSWNAMLSGYAQ-NGYVKEAKEIFDEMPCK----NSISWN 96
Query: 339 LMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK 398
ML + R++ F+ ++ ++ N ++ Y K + DA FD M ++
Sbjct: 97 GMLAAYVQNGRIEDARRL----FESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPER 152
Query: 399 NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELF 458
+ +SW ++I+GYA++G EA L++ E V + T+ +++ G+ E +F
Sbjct: 153 DEVSWNTMISGYAQNGELLEAQRLFE----ESPVRDVFTWTAMVSGYVQNGMLDEARRVF 208
Query: 459 TDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
M K + ++ ++ + + +++ A + M + +S W+ + I G
Sbjct: 209 DGMPEKNSV-----SWNAIIAGYVQCKRMDQARELFEAMPCQNVSS-WNTM-----ITGY 257
Query: 519 TSLGELA-ARNLFDMEPEK-SVNYVVLSNIYTAAGAWDNA 556
G++A ARN FD P++ S+++ + Y +G + A
Sbjct: 258 AQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEA 297
>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Brachypodium distachyon]
Length = 805
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 191/582 (32%), Positives = 297/582 (51%), Gaps = 52/582 (8%)
Query: 9 KTGQLKQALK-FSLSCPDTL-LDPSTYMSLLQFCIDK--------KAERQAHLIHAHIIT 58
+ G + AL+ F+ C + +DP S+L C +A R IHA I+
Sbjct: 218 QAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLGQCIHALIVR 277
Query: 59 NGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLV 118
G+ S+ H+ +I Y K + A K FD +P + VSW +I+G+ Q G AL V
Sbjct: 278 KGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGFGQAGSYAKALEV 337
Query: 119 FSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
+ M SG N+ TYS+ L +C + R + R
Sbjct: 338 LNLMEESGSEPNEVTYSNMLASCIKARDVLSARA-------------------------- 371
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
+F++I R V +WN ++ G + + D+ LFR M Q ++PD TL I
Sbjct: 372 ---------MFDKISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVI 422
Query: 239 LRASVGGIELMKI-SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
L +S + ++ + +Q+H ++ L + + L+D+Y+K G I A ++ M + D
Sbjct: 423 L-SSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERD 481
Query: 298 IISCTALISGFARDDNHS--KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQ 355
++ ++ISG A HS +EAFD FK M M + M+N CA ++S+ GRQ
Sbjct: 482 VVCWNSMISGLAI---HSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQ 538
Query: 356 IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGY 415
IHA K + VG+ALIDMYAK G + DA FD M KN+++W +I GYA++G+
Sbjct: 539 IHAQIVKDGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGF 598
Query: 416 GHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFS 475
G +A++L++ M P+ VTF+++L CSH+GL E F M + Y I P AEH++
Sbjct: 599 GEKAVDLFEYMLTTEQRPDGVTFIAVLTGCSHSGLVDEAIAFFNSMESTYGITPLAEHYT 658
Query: 476 CVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPE 535
C++D R G+L +I M K +W +L AC+++ N LGE AA++LF ++P+
Sbjct: 659 CLIDGLGRAGRLVEVEALIDNMPCKDDPIVWEVLLAACAVHHNAELGECAAKHLFRLDPK 718
Query: 536 KSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
YV+LSNIY + G +A R LM R + K GYS++
Sbjct: 719 NPSPYVLLSNIYASLGRHGDASGVRALMSSRGVVKGRGYSWI 760
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 144/544 (26%), Positives = 248/544 (45%), Gaps = 89/544 (16%)
Query: 59 NGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLV 118
N Y N LS + GD+ +AR D MP+RNVVSW +I+ A++ AL +
Sbjct: 73 NAYSYNAALSAA-----RRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALEL 127
Query: 119 FSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
+ MLR G+ FT +S L AC + L GR G K ENLFV++ALL +Y K
Sbjct: 128 YEGMLREGLVPTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTK 187
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
CG +EDA LF+ + + VS+ AM+GGL G DD+ LF M R G++ D + S+
Sbjct: 188 CGGVEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSV 247
Query: 239 LRASVGG-------IELMKISQ-IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
L + + ++ Q IH LI++ G S + SLID+Y K + A +++
Sbjct: 248 LGSCAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVF 307
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
S+ +S LI+GF + +++K A ++ M ++V ML C
Sbjct: 308 DSLPNISTVSWNILITGFGQAGSYAK-ALEVLNLMEESGSEPNEVTYSNMLASC------ 360
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
K+ ++ A FD++ +V +W +L++GY
Sbjct: 361 -----------------------------IKARDVLSARAMFDKISRPSVTTWNTLLSGY 391
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
+ + +EL+++M+H+ + P+ T +L +CS G+ G ++ + + R L
Sbjct: 392 CQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASV---RFLLH 448
Query: 471 AEHF--SCVVDLFARRGQL-------------------------------ESAYNMIRQM 497
+ F S +VD++++ GQ+ E A++ +QM
Sbjct: 449 NDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQM 508
Query: 498 ---NIKPTASLWSAILGACSIYGNTSLG-ELAARNLFDMEPEKSVNYVVLSNIYTAAGAW 553
+ PT S +++++ +C+ + G ++ A+ + D + L ++Y G
Sbjct: 509 RGNGMMPTESSYASMINSCARLSSVPQGRQIHAQIVKDGYDQNVYVGSALIDMYAKCGNM 568
Query: 554 DNAR 557
D+AR
Sbjct: 569 DDAR 572
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%)
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
AF+ +A NA + ++G++ A DEM D+NV+SW ++IA A+ EA
Sbjct: 65 AFRSLPRPNAYSYNAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEA 124
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFAC 445
+ELY+ M EG+VP T S+L AC
Sbjct: 125 LELYEGMLREGLVPTHFTLASVLSAC 150
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 174/539 (32%), Positives = 292/539 (54%), Gaps = 16/539 (2%)
Query: 44 KAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMI 103
K +Q H I A II NG++ N +++ K++ A + + AR+ FD++P+ N+ W +M
Sbjct: 112 KTSKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMF 171
Query: 104 SGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFV 163
GYAQ+ + +F M +R N FT+ L++C ++ L G + + K F
Sbjct: 172 RGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFR 231
Query: 164 ENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM 223
N FV + L+D+Y+ G + DA+ +F + ++VV+W +MI G + R +
Sbjct: 232 GNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSA----DLVSARRL 287
Query: 224 MRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK---LTGSLIDVYAKY 280
+ D ++ + G ++++ KL E N+ +++ YA
Sbjct: 288 FDLAPERDVVLWNIMVSGYIEGGDMVEAR-------KLFXEMPNRDVMFWNTVLKGYATN 340
Query: 281 GSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK-MGIDDVILCL 339
G++ + L+ M + +I S ALI G+A + E FK M+ + + +D L
Sbjct: 341 GNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFF-EVLGSFKRMLSESDVPPNDATLVT 399
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN 399
+L+ CA + +L+LG+ +H +A + VGNAL+DMYAK G I +A F M K+
Sbjct: 400 VLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKD 459
Query: 400 VISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFT 459
+ISW +LI G A H G +A+ L+ +MK+ G P+ +TF+ +L AC+H GL +G+ F
Sbjct: 460 LISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQ 519
Query: 460 DMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNT 519
M + Y I+P+ EH+ C+VD+ AR G+LE A +R+M ++ +W+ +LGAC IY N
Sbjct: 520 SMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRKMPVEADGVIWAGLLGACRIYKNV 579
Query: 520 SLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
L ELA + L ++EP+ NYV+LSNIY AG W++ + + M + +K PG S ++
Sbjct: 580 ELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIE 638
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 187/416 (44%), Gaps = 54/416 (12%)
Query: 17 LKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYA 76
L F + D + T+ +L+ C A + +H +I G+ N + T +I Y+
Sbjct: 186 LFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYS 245
Query: 77 KVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSS 136
G V A K F M ERNVV+WT+MI+GY + SA L S R
Sbjct: 246 AGGTVGDAYKIFCEMFERNVVAWTSMINGY-----------ILSADLVSARRLFDLAPER 294
Query: 137 ALRACARMRWLQGGRMIQGSIQKGRFVE--NLFVK---------SALLDLYAKCGWIEDA 185
+ + W M+ G I+ G VE LF + + +L YA G +E
Sbjct: 295 DV-----VLW---NIMVSGYIEGGDMVEARKLFXEMPNRDVMFWNTVLKGYATNGNVEAL 346
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG-MKPDCFTLGSILRAS-- 242
LFE + +++ SWNA+IGG A G + F+ M+ + + P+ TL ++L A
Sbjct: 347 EGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACAR 406
Query: 243 VGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCT 302
+G ++L K +H GL+ + + +L+D+YAK G I +A ++R M D+IS
Sbjct: 407 LGALDLGK--WVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWN 464
Query: 303 ALISGFARDDNHSK--EAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
LI G A HS+ +A +LF M D + +L C ++ + G FA
Sbjct: 465 TLIGGLAM---HSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDG-----FA 516
Query: 361 FKYQSSYDAAV-------GNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIA 408
+ +QS D + ++DM A++G + A +M + + + W L+
Sbjct: 517 Y-FQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRKMPVEADGVIWAGLLG 571
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 87/192 (45%), Gaps = 2/192 (1%)
Query: 16 ALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFY 75
+ K LS D + +T +++L C A +H + ++G + N+++ ++ Y
Sbjct: 380 SFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMY 439
Query: 76 AKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYS 135
AK G + +A F M ++++SW +I G A + +AL +F M +G + + T+
Sbjct: 440 AKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFI 499
Query: 136 SALRACARMRWLQGG-RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE- 193
L AC M ++ G Q + + ++D+ A+ G +E A ++
Sbjct: 500 GILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRKMPV 559
Query: 194 RKDVVSWNAMIG 205
D V W ++G
Sbjct: 560 EADGVIWAGLLG 571
>gi|357487403|ref|XP_003613989.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
gi|355515324|gb|AES96947.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
Length = 828
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 189/584 (32%), Positives = 306/584 (52%), Gaps = 5/584 (0%)
Query: 2 NIVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
+I+ + G ++ L+ S+ C D +S+ + C R A +H +++
Sbjct: 173 SIISCYVENGVYREGLEMFRSMICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMRE 232
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G + LS +I+ Y++ G + A++ F+ + +R+ WT+MIS Y QN E AL VF
Sbjct: 233 GMVGDGSLSNSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVF 292
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRF-VENLFVKSALLDLYAK 178
M S V N T S L +CAR+ L+ G+ + + + V L + AL+D Y+
Sbjct: 293 IKMQDSEVEPNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSA 352
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
C + L I +++VSWN +I A +G ND++ F M+ +G+ PD F+L S
Sbjct: 353 CWKMSSCEKLLHSIGNENIVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPDSFSLASS 412
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
+ AS + QIH ++K G + SL+D+Y+K G SAY ++ + I
Sbjct: 413 ISASASSGSIQFGQQIHGHVMKRGF-FDEFVQNSLMDMYSKCGFASSAYTIFNKIKHKSI 471
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
++ +I GF+++ S EA LF +M ++ I+ V + C+N+ L+ G+ IH
Sbjct: 472 VAWNCMICGFSQN-GISVEALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKWIHH 530
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHE 418
+ D + AL+DMYAK G++ A + FD + +K+V+SW+++IA + HG +
Sbjct: 531 KIIVTGNQNDLYIDTALVDMYAKCGDLQTAQKVFDSIVEKSVVSWSTMIAAHGIHGQINA 590
Query: 419 AIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVV 478
A L+ KM + PN+VTF+++L AC H G EG F M + Y I+P EHF+ +V
Sbjct: 591 ATSLFHKMVLSNIKPNEVTFMNILSACRHAGSVKEGKFYFNTMRDYYGIVPNVEHFASIV 650
Query: 479 DLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSV 538
DL +R G + AY +I+ + AS+W A+L C IYG + E A L + + +
Sbjct: 651 DLLSRAGDINGAYEIIKSIRTPVAASIWGALLNGCRIYGRMDMIEYIAEELGGISTDDTG 710
Query: 539 NYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
Y +LSNIY G W +RK R ME L+K PGYS ++ +K
Sbjct: 711 YYTLLSNIYAEGGNWYESRKVRSKMEGMGLKKVPGYSTVEIDRK 754
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 133/499 (26%), Positives = 255/499 (51%), Gaps = 23/499 (4%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H I+ +G+ + + T ++ Y ++ + A+K FD M R++V W+++IS Y +NG
Sbjct: 124 LHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVENGV 183
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
L +F +M+ G+R + S AC ++ L+ + + G + + V + + ++
Sbjct: 184 YREGLEMFRSMICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGSLSNS 243
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+ +Y++CG++ A LFE I+ + W +MI +++ +F M ++P+
Sbjct: 244 LIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVEPN 303
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN-KLTGSLIDVYAKYGSIRSAYQLY 290
T+ S+L + L + +H +++ + + L +LID Y+ + S +L
Sbjct: 304 DVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMSSCEKLL 363
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
S+ +I+S LIS +AR + + EA F M+ K + D L ++ A+ S+
Sbjct: 364 HSIGNENIVSWNTLISFYAR-EGLNDEAMAFFACMVAKGIMPDSFSLASSISASASSGSI 422
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
G+QIH K + +D V N+L+DMY+K G + A F+++ K++++W +I G+
Sbjct: 423 QFGQQIHGHVMK-RGFFDEFVQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICGF 481
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI---NKYRI 467
+++G EA+ L+ +M + N VTFLS + ACS+ G +G + +I N+ +
Sbjct: 482 SQNGISVEALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKWIHHKIIVTGNQNDL 541
Query: 468 LPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAAR 527
+ +VD++A+ G L++A + + K S WS ++ A I+G + AA
Sbjct: 542 YID----TALVDMYAKCGDLQTAQKVFDSIVEKSVVS-WSTMIAAHGIHGQIN----AAT 592
Query: 528 NLFDMEPEKSVNYVVLSNI 546
+LF + +VLSNI
Sbjct: 593 SLF--------HKMVLSNI 603
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 213/409 (52%), Gaps = 10/409 (2%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
+ YM L + C R+ +HAH++ +N STK++ Y+++G + S+R F
Sbjct: 2 TLYMPLFRTC---STLRRLTQLHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYT 58
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQ---FTYSSALRACARMRWL 147
P + ++ +I + N L +F+ ++ G + Q F Y S +RA + L
Sbjct: 59 HPSPDSFMFSVLIKCHLWNHLFREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVGEL 118
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
GR + G I K F E+ + ++L+ +Y + ++ DA +F+ + +D+V W+++I
Sbjct: 119 IVGRKLHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCY 178
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESS 266
G + +FRSM+ +G++PD L S+ A G I +++++ +H +++ G+
Sbjct: 179 VENGVYREGLEMFRSMICEGIRPDSVMLLSVAEA-CGKIGCLRLAKSVHGYVMREGMVGD 237
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
L+ SLI +Y++ G + A +L+ + T++IS + +++ +EA D+F M
Sbjct: 238 GSLSNSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQNECF-EEALDVFIKMQ 296
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA-VGNALIDMYAKSGEI 385
++ +DV + +LN CA + L G+ +H F + +G ALID Y+ ++
Sbjct: 297 DSEVEPNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKM 356
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
+ + +G++N++SW +LI+ YA+ G EA+ + M +G++P+
Sbjct: 357 SSCEKLLHSIGNENIVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPD 405
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 10/208 (4%)
Query: 248 LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG 307
L +++Q+H ++ L ++ + L++ Y++ GS++S+ ++ + D + LI
Sbjct: 14 LRRLTQLHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYTHPSPDSFMFSVLIK- 72
Query: 308 FARDDNH-SKEAFDLFKDMILKKMGIDDVILCLML-----NICANVASLNLGRQIHAFAF 361
NH +E LF I +MG C L V L +GR++H
Sbjct: 73 -CHLWNHLFREVLSLFNHHI--QMGSKLTQNCAFLYPSVIRAVTGVGELIVGRKLHGRIL 129
Query: 362 KYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIE 421
K D +G +L+ MY + + DA + FDEM ++++ W+S+I+ Y ++G E +E
Sbjct: 130 KSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVENGVYREGLE 189
Query: 422 LYKKMKHEGMVPNDVTFLSLLFACSHTG 449
+++ M EG+ P+ V LS+ AC G
Sbjct: 190 MFRSMICEGIRPDSVMLLSVAEACGKIG 217
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 175/504 (34%), Positives = 279/504 (55%), Gaps = 48/504 (9%)
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
+A+ G + AR+ FD+MP RNVV+W AMI+ Y QN + + A+ +F M N ++
Sbjct: 243 FARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEK----NSISW 298
Query: 135 SSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER 194
++ + RM L R + + N+ ++A++ Y + ++DA +F +I
Sbjct: 299 TTVINGYVRMGKLDEARQLLNQMP----YRNVAAQTAMISGYVQNKRMDDARQIFNQISI 354
Query: 195 KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQI 254
+DVV WN MI G + G D++ LF+ M+++
Sbjct: 355 RDVVCWNTMIAGYSQCGRMDEALHLFKQMVKK---------------------------- 386
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH 314
D++ S N + S YA+ G + +A +++ M + +I+S +LISG ++ ++
Sbjct: 387 -DIV------SWNTMVAS----YAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSY 435
Query: 315 SKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNA 374
+A F M + D L+ CA++A+L +G+Q+H K + D V NA
Sbjct: 436 L-DALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNA 494
Query: 375 LIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
LI MYAK G I+ A F ++ +V+SW SLIA YA +G G EA++L+ KM+ EG+ P+
Sbjct: 495 LITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPD 554
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI 494
+VTF+ +L ACSH GL +G +LF M+ Y I P AEH++C+VDL R G+LE A+ ++
Sbjct: 555 EVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLV 614
Query: 495 RQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWD 554
R M I A +W A+LGAC I+GN L + AA L + EP K+ NYV+LSN+ AG WD
Sbjct: 615 RGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWD 674
Query: 555 NARKTRKLMEERSLRKNPGYSFLQ 578
+ R+LM+E+ K PG+S+++
Sbjct: 675 EVARVRRLMKEKGAEKQPGWSWIE 698
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 139/578 (24%), Positives = 245/578 (42%), Gaps = 82/578 (14%)
Query: 41 IDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWT 100
ID+ + H+ H + +T+ +I +AK G + AR+ FD MP+RN+VSW
Sbjct: 31 IDEAIKVFQHMTHKNTVTH---------NSMISAFAKNGRISDARQLFDGMPQRNIVSWN 81
Query: 101 AMISGYAQNGYDENALLVF-----------SAMLRSGVRANQFTYSSALRACARMRW--L 147
+MI+ Y N E A +F + M+ R + + L +W +
Sbjct: 82 SMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKARNLFNLLPYKWNPV 141
Query: 148 QGGRMIQGSIQKGRFVE-----------NLFVKSALLDLYAKCGWIEDAWILFERIERKD 196
M+ G + +F E +L +++L Y + G + FE + +D
Sbjct: 142 CCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERD 201
Query: 197 VVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL--RASVGGI-------E 247
VVSWN M+ G G + S+ F + P+ + ++L A G I +
Sbjct: 202 VVSWNLMVDGFVEVGDLNSSWEFFEKI----PNPNTVSWVTMLCGFARFGKIAEARRLFD 257
Query: 248 LMKISQI--------------H-DLIIKLGLESSNKLT---GSLIDVYAKYGSIRSAYQL 289
M I + H D I L +E K + ++I+ Y + G + A QL
Sbjct: 258 QMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQL 317
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
M ++ + TA+ISG+ ++ I ++ I DV+ C I
Sbjct: 318 LNQMPYRNVAAQTAMISGYVQNKRMDD------ARQIFNQISIRDVV-CWNTMIAGYSQC 370
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
+ +H FK D N ++ YA+ G++ A + F+EM +KN++SW SLI+G
Sbjct: 371 GRMDEALH--LFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISG 428
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
++G +A++ + M HEG P+ TF L +C+H G +L ++ K
Sbjct: 429 LTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLH-QLVMKSGYAT 487
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
+ ++ ++A+ G + SA + + ++ S W++++ A ++ GN G A +
Sbjct: 488 DLFVSNALITMYAKCGSISSAELLFKDIDHFDVVS-WNSLIAAYALNGN---GREALKLF 543
Query: 530 FDMEPE----KSVNYVVLSNIYTAAGAWDNARKTRKLM 563
ME E V +V + + + G D K K M
Sbjct: 544 HKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCM 581
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 2/185 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D ST+ L C A + +H ++ +GY ++L +S +I YAK G + SA F
Sbjct: 453 DQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLF 512
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ +VVSW ++I+ YA NG AL +F M GV ++ T+ L AC+ + +
Sbjct: 513 KDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLID 572
Query: 149 GGRMIQGSIQKGRFVENLFVKSA-LLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGG 206
G + + + +E L A ++DL + G +E+A+ L ++ + W A++G
Sbjct: 573 QGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGA 632
Query: 207 LAMQG 211
+ G
Sbjct: 633 CRIHG 637
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 23/171 (13%)
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
N I KSG+I +A + F M KN ++ S+I+ +AK+G +A +L+ M
Sbjct: 19 NLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQR--- 75
Query: 433 PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFS--CVVDLFARRGQLESA 490
N V++ S++ A H E +LF M P + +S ++ + R G+L A
Sbjct: 76 -NIVSWNSMIAAYLHNDRVEEARQLFDKM-------PTRDLYSWTLMITCYTRNGELAKA 127
Query: 491 YNMIRQMNIKPTASLWSAILGACSIYG---NTSLGELAARNLFDMEPEKSV 538
N+ + K W+ + + G N E AR LFD P K +
Sbjct: 128 RNLFNLLPYK-----WNPVCCNAMVAGYAKNRQFDE--ARRLFDAMPAKDL 171
>gi|326524926|dbj|BAK04399.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 584
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 179/538 (33%), Positives = 290/538 (53%), Gaps = 10/538 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQ--- 108
IHA + G +N +T+++ A + AR+ FD P R+ W ++ +A
Sbjct: 42 IHARAVLLGVAANPAFATRLLAAAAPC-SLAYARRVFDAAPRRDAYMWNTLLRAHAHAQA 100
Query: 109 --NGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENL 166
AL ++ M +GV + +TY L ACA R + GR G + E+
Sbjct: 101 PAGSTAGGALQLYKRMRAAGVAPDCYTYPIVLPACAAARAPRLGRAAHGDAVRFALAEDG 160
Query: 167 FVKSALLDLYAKCGWIEDAWILF---ERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM 223
FV SAL+ +Y + G + DA +F + + VVSW AM+ G A + +F +M
Sbjct: 161 FVHSALIAMYCQEGDVADAEQVFLAAAAVGARTVVSWTAMVAGYAQNCLFGQAVTVFGAM 220
Query: 224 MRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
+ QGM P+ TL S L G L +H ++KLG +++ L +LI +Y K GSI
Sbjct: 221 VAQGMLPNEITLISFLPCLQGQECLAAGEMVHGFVVKLGFDANLPLVNALIAMYGKCGSI 280
Query: 284 RSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNI 343
+A +L+ M ++S +++ + ++ + + A F M+ +K+G D V L +L+
Sbjct: 281 AAAKELFDGMAAHTVVSWNTMVAMYEQNGDGVR-AIKFFHRMLSEKVGFDAVTLVSVLSA 339
Query: 344 CANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISW 403
C +L G+ +H A DA +GN L+DMYAK GEIA A +AFD + + V+SW
Sbjct: 340 CTRQGALETGKWVHELARSRGLDTDARIGNVLVDMYAKCGEIAYARQAFDGLREPGVVSW 399
Query: 404 TSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMIN 463
+++I+ YA HG EA+ L+ MK +G+ PN T ++L AC H+GL EG +F ++
Sbjct: 400 SAMISAYANHGEPEEALNLFSAMKDQGVKPNSFTLTAVLVACGHSGLVDEGLAIFNSIVR 459
Query: 464 KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGE 523
Y I P E+++C+VD+ R G+L AY +IR M+++P +W A LG C ++GN L E
Sbjct: 460 DYHISPTLENYACMVDMLGRAGRLVEAYEIIRGMSMQPDKCIWGAFLGGCRLHGNLELAE 519
Query: 524 LAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSK 581
A++LF YV+++N+Y AG ++A +TR+ M+E L+K G+S + +S+
Sbjct: 520 FVAKDLFQSGSNDVTFYVLMANMYFEAGMLEDAERTRRAMKEMELKKTAGHSLVCTSR 577
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 151/318 (47%), Gaps = 12/318 (3%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T +S L ++ ++H ++ G+++NL L +I Y K G + +A++ FD M
Sbjct: 231 TLISFLPCLQGQECLAAGEMVHGFVVKLGFDANLPLVNALIAMYGKCGSIAAAKELFDGM 290
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
VVSW M++ Y QNG A+ F ML V + T S L AC R L+ G+
Sbjct: 291 AAHTVVSWNTMVAMYEQNGDGVRAIKFFHRMLSEKVGFDAVTLVSVLSACTRQGALETGK 350
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ + + + + L+D+YAKCG I A F+ + VVSW+AMI A G
Sbjct: 351 WVHELARSRGLDTDARIGNVLVDMYAKCGEIAYARQAFDGLREPGVVSWSAMISAYANHG 410
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLT 270
+++ LF +M QG+KP+ FTL ++L A G+ ++ + ++ + + +
Sbjct: 411 EPEEALNLFSAMKDQGVKPNSFTLTAVLVACGHSGLVDEGLAIFNSIVRDYHISPTLENY 470
Query: 271 GSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALISGFARDDNHSKEAF---DLFKDMI 326
++D+ + G + AY++ R M ++ D A + G N F DLF+
Sbjct: 471 ACMVDMLGRAGRLVEAYEIIRGMSMQPDKCIWGAFLGGCRLHGNLELAEFVAKDLFQS-- 528
Query: 327 LKKMGIDDVIL-CLMLNI 343
G +DV LM N+
Sbjct: 529 ----GSNDVTFYVLMANM 542
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 2/202 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
D T +S+L C + A +H + G +++ + ++ YAK G++ AR+A
Sbjct: 328 FDAVTLVSVLSACTRQGALETGKWVHELARSRGLDTDARIGNVLVDMYAKCGEIAYARQA 387
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD + E VVSW+AMIS YA +G E AL +FSAM GV+ N FT ++ L AC +
Sbjct: 388 FDGLREPGVVSWSAMISAYANHGEPEEALNLFSAMKDQGVKPNSFTLTAVLVACGHSGLV 447
Query: 148 QGGRMIQGSIQKGRFVENLFVKSA-LLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIG 205
G I SI + + A ++D+ + G + +A+ + + + D W A +G
Sbjct: 448 DEGLAIFNSIVRDYHISPTLENYACMVDMLGRAGRLVEAYEIIRGMSMQPDKCIWGAFLG 507
Query: 206 GLAMQGFNDDSFWLFRSMMRQG 227
G + G + + ++ + + + G
Sbjct: 508 GCRLHGNLELAEFVAKDLFQSG 529
>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g35130, chloroplastic; Flags: Precursor
gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 804
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 178/558 (31%), Positives = 313/558 (56%), Gaps = 9/558 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY +++ + + IHA +I G+ S++++ +I Y K+G A K F
Sbjct: 129 DTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVF 188
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ MPER++VSW +MISGY G ++L++F ML+ G + ++F+ SAL AC+ + +
Sbjct: 189 EEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPK 248
Query: 149 GGRMIQGSIQKGRF-VENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ I + R ++ V +++LD+Y+K G + A +F + ++++V+WN MIG
Sbjct: 249 MGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCY 308
Query: 208 AMQGFNDDSFWLFRSMMRQ-GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
A G D+F F+ M Q G++PD T ++L AS +++ IH ++ G
Sbjct: 309 ARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLPH 364
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD-DNHSKEAFDLFKDM 325
L +LID+Y + G ++SA ++ M + ++IS ++I+ + ++ N+S A +LF+++
Sbjct: 365 MVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYS--ALELFQEL 422
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ D + +L A SL+ GR+IHA+ K + + + N+L+ MYA G++
Sbjct: 423 WDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDL 482
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
DA + F+ + K+V+SW S+I YA HG+G ++ L+ +M + PN TF SLL AC
Sbjct: 483 EDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAAC 542
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
S +G+ EGWE F M +Y I P EH+ C++DL R G +A + +M PTA +
Sbjct: 543 SISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARI 602
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
W ++L A + + ++ E AA +F ME + + YV+L N+Y AG W++ + + LME
Sbjct: 603 WGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMES 662
Query: 566 RSLRKNPGYSFLQSSKKN 583
+ + + S +++ K+
Sbjct: 663 KGISRTSSRSTVEAKGKS 680
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 134/435 (30%), Positives = 230/435 (52%), Gaps = 7/435 (1%)
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
A + FD M + + W MI G+ G A+ +S M+ +GV+A+ FTY +++ A
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
+ L+ G+ I + K FV +++V ++L+ LY K G DA +FE + +D+VSWN+M
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGL 263
I G G S LF+ M++ G KPD F+ S L A +IH ++ +
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI 262
Query: 264 ESSNKLT-GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
E+ + + S++D+Y+KYG + A +++ M++ +I++ +I +AR + +AF F
Sbjct: 263 ETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYAR-NGRVTDAFLCF 321
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
+ M + DVI +N+ A L GR IH +A + + ALIDMY +
Sbjct: 322 QKMSEQNGLQPDVITS--INLLPASAILE-GRTIHGYAMRRGFLPHMVLETALIDMYGEC 378
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
G++ A FD M +KNVISW S+IA Y ++G + A+EL++++ +VP+ T S+L
Sbjct: 379 GQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASIL 438
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
A + + EG E+ ++ K R + +V ++A G LE A + +K
Sbjct: 439 PAYAESLSLSEGREIHAYIV-KSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDV 497
Query: 503 ASLWSAILGACSIYG 517
S W++I+ A +++G
Sbjct: 498 VS-WNSIIMAYAVHG 511
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 179/341 (52%), Gaps = 13/341 (3%)
Query: 176 YAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTL 235
+A +EDA LF+ + + D WN MI G G ++ + M+ G+K D FT
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 236 GSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLK 295
++++ G L + +IH ++IKLG S + SLI +Y K G A +++ M +
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 296 TDIISCTALISGF-ARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGR 354
DI+S ++ISG+ A D S + LFK+M+ D L C++V S +G+
Sbjct: 194 RDIVSWNSMISGYLALGDGFS--SLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGK 251
Query: 355 QIHAFAFKYQ-SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKH 413
+IH A + + + D V +++DMY+K GE++ A R F+ M +N+++W +I YA++
Sbjct: 252 EIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARN 311
Query: 414 GYGHEAIELYKKMKHE-GMVPNDVTFLSLLFACS-HTGLTCEGWELFTDMINKYRILPRA 471
G +A ++KM + G+ P+ +T ++LL A + G T G+ + + LP
Sbjct: 312 GRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAM------RRGFLPHM 365
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
+ ++D++ GQL+SA + +M K S W++I+ A
Sbjct: 366 VLETALIDMYGECGQLKSAEVIFDRMAEKNVIS-WNSIIAA 405
>gi|414881651|tpg|DAA58782.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 736
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 184/536 (34%), Positives = 298/536 (55%), Gaps = 13/536 (2%)
Query: 50 HLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQN 109
H + + ++ +N+ +ST ++ Y K+G V A++ FD M RN VSW AM+SGYA
Sbjct: 143 HALACKLPSSCGSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYATG 202
Query: 110 GYDENALLVFSAML-RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFV 168
E A +F ML + + N+F ++ L A + L G + G + K V + V
Sbjct: 203 KCSEEAFELFRLMLQKCPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVSV 262
Query: 169 KSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGM 228
+++L+ +YAK ++ A +F + ++ ++W+AMI G A G + + +F M G
Sbjct: 263 ENSLVTMYAKAECMDAAMRVFGSSKERNSITWSAMITGYAQNGEANCAARMFLQMHSSGF 322
Query: 229 KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSA-- 286
P FT +L A L+ Q H L++KLG E+ + +L+D+YAK G I A
Sbjct: 323 TPTEFTFVGVLNACSDMGALVVGKQTHCLMVKLGFETQVYVKSALVDMYAKCGCIGDAKD 382
Query: 287 --YQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCL--MLN 342
+QLY D++ TA+I+G ++ H +EA L+ M K GI L + +L
Sbjct: 383 GFHQLYDV---DDVVLWTAMITGHVQNGEH-EEALMLYSRM--DKQGIIPSYLTVTSVLR 436
Query: 343 ICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVIS 402
CA +A+L+LG+Q+HA K + S +VG AL MY+K G + D+ F M D++VIS
Sbjct: 437 ACACLAALDLGKQLHAQILKCRFSLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDVIS 496
Query: 403 WTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI 462
W S+I+ +++HG G +A++++++MK EG P+ +TF++LL ACSH GL GW F M
Sbjct: 497 WNSIISVFSQHGRGSDALDMFEEMKLEGTAPDHITFINLLSACSHMGLVDRGWFYFRAMT 556
Query: 463 NKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLG 522
Y ++P +H++C+VD+ +R GQL+ A + I + I LW +LGAC + +G
Sbjct: 557 KDYNLIPTLDHYACMVDILSRAGQLKEAKDFIDSITIDHGTCLWRIVLGACRSLRDFDVG 616
Query: 523 ELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
A L ++ E S Y++LSNIY A W++ + R LM R + K+ G S+++
Sbjct: 617 AYAGEQLMELGTEDSSAYILLSNIYAAQRKWNDVERVRHLMRLRGVSKDLGCSWVE 672
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 120/211 (56%), Gaps = 1/211 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T++ +L C D A H ++ G+E+ +++ + ++ YAK G + A+ F ++
Sbjct: 328 TFVGVLNACSDMGALVVGKQTHCLMVKLGFETQVYVKSALVDMYAKCGCIGDAKDGFHQL 387
Query: 92 PE-RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+ +VV WTAMI+G+ QNG E AL+++S M + G+ + T +S LRACA + L G
Sbjct: 388 YDVDDVVLWTAMITGHVQNGEHEEALMLYSRMDKQGIIPSYLTVTSVLRACACLAALDLG 447
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ + I K RF V +AL +Y+KCG +ED+ ++F R+ +DV+SWN++I +
Sbjct: 448 KQLHAQILKCRFSLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDVISWNSIISVFSQH 507
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
G D+ +F M +G PD T ++L A
Sbjct: 508 GRGSDALDMFEEMKLEGTAPDHITFINLLSA 538
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 199/422 (47%), Gaps = 34/422 (8%)
Query: 120 SAMLRSGVRANQFTYSSALRACARM-RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
SA+ R+ +R + + LR A R + G + G K + V ++L+ Y
Sbjct: 3 SAVPRA-LRMSHAQFIEHLRCAASSDRTPRTGEALHGWALKSGAASHAPVSNSLITFYCS 61
Query: 179 CG--WIEDAWILFERIER--KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR--QGMKPDC 232
+ A+++F I +DV SWN+++ L+ + + FRSMM + + P
Sbjct: 62 LPRPLLGAAYVVFADIPAALRDVASWNSLLNPLS-RHHPVSALSHFRSMMSSPEAVLPSP 120
Query: 233 FTLGS-------ILRASVGGIELMKISQIHDLIIKLGLESSNK---LTGSLIDVYAKYGS 282
+ + + AS G + H L KL + ++ +L+++Y K G+
Sbjct: 121 HSFAAAFTAAARVPSASAGAV-------THALACKLPSSCGSNNVFVSTALLNMYCKLGA 173
Query: 283 IRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK-KMGIDDVILCLML 341
+ A +++ ML + +S A++SG+A S+EAF+LF+ M+ K + ++ + +L
Sbjct: 174 VSDAKRVFDGMLHRNAVSWAAMVSGYATGKC-SEEAFELFRLMLQKCPLEKNEFVTTAVL 232
Query: 342 NICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVI 401
+ + L +G Q+H K +V N+L+ MYAK+ + A R F ++N I
Sbjct: 233 SAVSVPLGLLMGTQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMRVFGSSKERNSI 292
Query: 402 SWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM 461
+W+++I GYA++G + A ++ +M G P + TF+ +L ACS G G + M
Sbjct: 293 TWSAMITGYAQNGEANCAARMFLQMHSSGFTPTEFTFVGVLNACSDMGALVVGKQTHCLM 352
Query: 462 INKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSL 521
+ K + S +VD++A+ G + A + Q+ LW+A+ I G+
Sbjct: 353 V-KLGFETQVYVKSALVDMYAKCGCIGDAKDGFHQLYDVDDVVLWTAM-----ITGHVQN 406
Query: 522 GE 523
GE
Sbjct: 407 GE 408
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 91/186 (48%), Gaps = 3/186 (1%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNG 60
++ + + G+ ++AL + PS T S+L+ C A +HA I+
Sbjct: 399 MITGHVQNGEHEEALMLYSRMDKQGIIPSYLTVTSVLRACACLAALDLGKQLHAQILKCR 458
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+ + T + Y+K G++ + F RMP+R+V+SW ++IS ++Q+G +AL +F
Sbjct: 459 FSLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDVISWNSIISVFSQHGRGSDALDMFE 518
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKG-RFVENLFVKSALLDLYAKC 179
M G + T+ + L AC+ M + G ++ K + L + ++D+ ++
Sbjct: 519 EMKLEGTAPDHITFINLLSACSHMGLVDRGWFYFRAMTKDYNLIPTLDHYACMVDILSRA 578
Query: 180 GWIEDA 185
G +++A
Sbjct: 579 GQLKEA 584
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 183/558 (32%), Positives = 309/558 (55%), Gaps = 8/558 (1%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG-YESNLHLSTKVIIFYAKVGDVL 82
PD P L+ C + +IH N S++ + + ++ Y+K G +
Sbjct: 101 PDNFTIPIA----LKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMG 156
Query: 83 SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAM-LRSGVRANQFTYSSALRAC 141
A K F+ + V WT+M++GY QN E AL +FS M + V + T S + AC
Sbjct: 157 EALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSAC 216
Query: 142 ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN 201
A++ ++ G + G + + F +L + ++LL+LYAK G + A LF ++ KDV+SW+
Sbjct: 217 AQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWS 276
Query: 202 AMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKL 261
MI A +++ LF M+ + +P+ T+ S L+A L + +IH + +
Sbjct: 277 TMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWK 336
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDL 321
G E ++ +LID+Y K A L++ + K D++S AL+SG+A++ + ++ +
Sbjct: 337 GFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQN-GMAYKSMGV 395
Query: 322 FKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
F++M+ + D V + +L + + +H + + + + VG +LI++Y+K
Sbjct: 396 FRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSK 455
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM-KHEGMVPNDVTFLS 440
G + DA + F M ++V+ W+S+IA Y HG G EA+E++ +M K+ + PN+VTFLS
Sbjct: 456 CGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLS 515
Query: 441 LLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIK 500
+L ACSH GL EG ++F M++ Y++ P +EHF +VDL R GQL A ++I +M I
Sbjct: 516 ILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIP 575
Query: 501 PTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTR 560
+W A+LGAC I+ N +GE AA+NLF ++P + Y++LSNIY G WDN + R
Sbjct: 576 AGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELR 635
Query: 561 KLMEERSLRKNPGYSFLQ 578
++ER L+K G S ++
Sbjct: 636 TRIKERGLKKMFGQSMVE 653
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 142/408 (34%), Positives = 226/408 (55%), Gaps = 9/408 (2%)
Query: 175 LYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFT 234
+Y I+ A I+FE I WN MI G A G S L+ MM +G+KPD F
Sbjct: 761 MYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFA 820
Query: 235 LGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML 294
L++ G +L + IH ++ G + + +L+D+YAK G I +A ++ M
Sbjct: 821 FPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMA 880
Query: 295 KTDIISCTALISGFARDDNHSKEA--FDLFKD--MILKKMGIDDVILCLMLNICANVASL 350
D++S T++ISG+A + +S+ FDL + +I ++ I V+L C N+ +L
Sbjct: 881 VRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLA-----CGNLGAL 935
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
G H++ + +D V A++DMY+K G + A FDE K+++ W+++IA Y
Sbjct: 936 RKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASY 995
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
HG+G +AI+L+ +M G+ P+ VTF +L ACSH+GL EG F M ++ I +
Sbjct: 996 GIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARK 1055
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
+++C+VDL R GQL A ++I M ++P AS+W ++LGAC I+ N L E A +LF
Sbjct: 1056 LSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLF 1115
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
++P + +V+LSNIY A W+ K RK+M R K G+S ++
Sbjct: 1116 HLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVE 1163
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 144/493 (29%), Positives = 256/493 (51%), Gaps = 21/493 (4%)
Query: 34 MSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPE 93
+ L Q C + ++ Q +H+ + G + +TK+ YAK + +ARK FD P
Sbjct: 8 VDLFQACNNGRSVSQ---LHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPH 64
Query: 94 RNVVSWTAMISGYAQNGYDENALLVFSAML-RSGVRANQFTYSSALRACARMRWLQGGRM 152
NV W + + Y + E L +F M+ +G + FT AL+ACA +R L+ G++
Sbjct: 65 PNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKV 124
Query: 153 IQGSIQKGRFV-ENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I G +K + ++FV SAL++LY+KCG + +A +FE +R D V W +M+ G
Sbjct: 125 IHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNN 184
Query: 212 FNDDSFWLFRSM-MRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
+++ LF M M + D TL S++ A + + S +H L+I+ + L
Sbjct: 185 DPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLV 244
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
SL+++YAK G + A L+ M + D+IS + +I+ +A ++ + EA +LF +MI K+
Sbjct: 245 NSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEA-ANEALNLFHEMIEKRF 303
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
+ V + L CA +L G++IH A D +V ALIDMY K +A
Sbjct: 304 EPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVD 363
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
F + K+V+SW +L++GYA++G ++++ +++ M +G+ P+ V + +L A S G
Sbjct: 364 LFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELG- 422
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCV------VDLFARRGQLESAYNMIRQMNIKPTAS 504
+F + + + R+ S V ++L+++ G L A + + M ++
Sbjct: 423 ------IFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVV- 475
Query: 505 LWSAILGACSIYG 517
+WS+++ A I+G
Sbjct: 476 IWSSMIAAYGIHG 488
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 184/363 (50%), Gaps = 3/363 (0%)
Query: 53 HAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYD 112
HA I G + + + TK I Y + +A F+ +P W MI G+A +G
Sbjct: 740 HAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRF 799
Query: 113 ENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSAL 172
++L ++S M+ G++ ++F + AL++CA + LQ G++I + +LFV +AL
Sbjct: 800 LSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAAL 859
Query: 173 LDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDC 232
+D+YAKCG IE A ++F+++ +D+VSW +MI G A G+N ++ F M G+ P+
Sbjct: 860 VDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNR 919
Query: 233 FTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRS 292
++ S+L A L K H +I+ G E + +++D+Y+K GS+ A L+
Sbjct: 920 VSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDE 979
Query: 293 MLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNL 352
D++ +A+I+ + H ++A DLF M+ + V +L+ C++ L
Sbjct: 980 TAGKDLVCWSAMIASYGI-HGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEE 1038
Query: 353 GRQ-IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGY 410
G+ ++ + + ++D+ ++G++++A + M + + W SL+
Sbjct: 1039 GKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGAC 1098
Query: 411 AKH 413
H
Sbjct: 1099 RIH 1101
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 142/273 (52%), Gaps = 9/273 (3%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS 83
PD P L+ C ++ +IH H++ G ++L + ++ YAK GD+ +
Sbjct: 816 PDKFAFPFA----LKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEA 871
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
AR FD+M R++VSWT+MISGYA NGY+ L F M SGV N+ + S L AC
Sbjct: 872 ARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGN 931
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
+ L+ G + + F ++ V +A++D+Y+KCG ++ A LF+ KD+V W+AM
Sbjct: 932 LGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAM 991
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLG 262
I + G + LF M++ G++P T +L A S G L++ +++ ++
Sbjct: 992 IASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSG--LLEEGKMYFQLMTEE 1049
Query: 263 LESSNKLT--GSLIDVYAKYGSIRSAYQLYRSM 293
+ KL+ ++D+ + G + A L +M
Sbjct: 1050 FVIARKLSNYACMVDLLGRAGQLSEAVDLIENM 1082
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 36/221 (16%)
Query: 354 RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKH 413
++ HA F Y YD+ + MY I A+ F+++ + W +I G+A
Sbjct: 737 KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796
Query: 414 GYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS-----------HTGLTCEGW--ELFTD 460
G ++ELY KM +G+ P+ F L +C+ H L C G +LF D
Sbjct: 797 GRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVD 856
Query: 461 MINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG-ACSIYGNT 519
+ +VD++A+ G +E+A + +M ++ S S I G A + Y +
Sbjct: 857 --------------AALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSE 902
Query: 520 SLGELAARNLFDMEPEKSV--NYVVLSNIYTAAGAWDNARK 558
+LG FD+ V N V + ++ A G RK
Sbjct: 903 TLG------FFDLMRSSGVIPNRVSILSVLLACGNLGALRK 937
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 174/530 (32%), Positives = 292/530 (55%), Gaps = 38/530 (7%)
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
A F+ + E N++ W M G+A + +AL ++ M+ G+ N +T+ L++CA+
Sbjct: 16 AISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 75
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLY--------------------------- 176
++ + G I G + K + +L+V ++L+ +Y
Sbjct: 76 LKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTAL 135
Query: 177 ----AKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDC 232
A G+IE A +F+ I KDVVSWNAMI G G ++ LF+ MM+ ++PD
Sbjct: 136 VTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDE 195
Query: 233 FTLGSILRASV--GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
T+ +++ AS G IEL + Q+H I G S+ K+ +LID Y+K G + +A L+
Sbjct: 196 STMVTVISASARSGSIELGR--QVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLF 253
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
+ D+IS LI G+ N KEA LF++M+ +DV + +L+ CA++ ++
Sbjct: 254 LGLSYKDVISWNILIGGYTHL-NLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAI 312
Query: 351 NLGRQIHAFAFKYQSSYDAA--VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA 408
++GR IH + K A + +LIDMY+K G+I A++ F+ M K++ +W ++I
Sbjct: 313 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIF 372
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
G+A HG + A +++ +M+ + P+D+TF+ LL ACSH G+ G +F M + Y+I
Sbjct: 373 GFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKIT 432
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARN 528
P+ EH+ C++DL G + A MI M ++P +W ++L AC ++GN LGE A+N
Sbjct: 433 PKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQN 492
Query: 529 LFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
LF +EP +YV+LSNIY AG W+ + R L+ ++ ++K PG S ++
Sbjct: 493 LFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIE 542
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 145/462 (31%), Positives = 230/462 (49%), Gaps = 49/462 (10%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVI-------------- 72
L + T+ LL+ C KA ++ IH H++ GYE +L++ T +I
Sbjct: 60 LPNSYTFPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHK 119
Query: 73 IF-----------------YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENA 115
+F YA G + SAR FD +P ++VVSW AMISGY + G + A
Sbjct: 120 VFDRSSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEA 179
Query: 116 LLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDL 175
L +F M+++ VR ++ T + + A AR ++ GR + I F NL + +AL+D
Sbjct: 180 LELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDF 239
Query: 176 YAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTL 235
Y+KCG +E A LF + KDV+SWN +IGG ++ LF+ M+R G P+ T+
Sbjct: 240 YSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTM 299
Query: 236 GSILR--ASVGGIELMKISQIHDLIIKL--GLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
SIL A +G I++ + IH I K G+ +++ L SLID+Y+K G I +A+Q++
Sbjct: 300 LSILHACAHLGAIDIGR--WIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFN 357
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
SML + + A+I GFA + AFD+F M ++ DD+ +L+ C++ L+
Sbjct: 358 SMLHKSLPAWNAMIFGFAM-HGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLD 416
Query: 352 LGRQI-HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAG 409
LGR I + Y+ + +ID+ SG +A M + + + W SL+
Sbjct: 417 LGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKA 476
Query: 410 YAKHGYGHEAIELYKK-----MKHEGMVPNDVTFLSLLFACS 446
HG +EL +K K E P LS ++A +
Sbjct: 477 CKMHG----NVELGEKFAQNLFKIEPNNPGSYVLLSNIYATA 514
>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Glycine max]
Length = 676
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 169/551 (30%), Positives = 311/551 (56%), Gaps = 4/551 (0%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y SL+ K+ +H ++I +G+ + L K+I Y K G + ARK FD +P
Sbjct: 4 YSSLIAQSAHTKSLTTLRAVHTNVIKSGFSYSF-LGHKLIDGYIKCGSLAEARKLFDELP 62
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
R++V+W +MIS + +G + A+ + ML GV + +T+S+ +A +++ ++ G+
Sbjct: 63 SRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQR 122
Query: 153 IQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
G ++ G V + FV SAL+D+YAK + DA ++F R+ KDVV + A+I G A G
Sbjct: 123 AHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHG 182
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
+ ++ +F M+ +G+KP+ +TL IL +L+ IH L++K GLES
Sbjct: 183 LDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQT 242
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
SL+ +Y++ I + +++ + + ++ T+ + G ++ + A +F++MI +
Sbjct: 243 SLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQN-GREEVAVSIFREMIRCSIS 301
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
+ L +L C+++A L +G QIHA K + G ALI++Y K G + A
Sbjct: 302 PNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSV 361
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLT 451
FD + + +V++ S+I YA++G+GHEA+EL++++K+ G+VPN VTF+S+L AC++ GL
Sbjct: 362 FDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLV 421
Query: 452 CEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
EG ++F + N + I +HF+C++DL R +LE A +I ++ P LW +L
Sbjct: 422 EEGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVR-NPDVVLWRTLLN 480
Query: 512 ACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKN 571
+C I+G + E + ++ P +++L+N+Y +AG W+ + + + + L+K+
Sbjct: 481 SCKIHGEVEMAEKVMSKILELAPGDGGTHILLTNLYASAGKWNQVIEMKSTIRDLKLKKS 540
Query: 572 PGYSFLQSSKK 582
P S++ ++
Sbjct: 541 PAMSWVDVDRE 551
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 219/420 (52%), Gaps = 11/420 (2%)
Query: 2 NIVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
+++ ++ G+ K+A++F ++ L D T+ ++ + R H +
Sbjct: 71 SMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVL 130
Query: 60 GYES-NLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLV 118
G E + +++ ++ YAK + A F R+ E++VV +TA+I GYAQ+G D AL +
Sbjct: 131 GLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKI 190
Query: 119 FSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
F M+ GV+ N++T + L C + L G++I G + K + +++LL +Y++
Sbjct: 191 FEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSR 250
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
C IED+ +F +++ + V+W + + GL G + + +FR M+R + P+ FTL SI
Sbjct: 251 CNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSI 310
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
L+A L QIH + +KLGL+ + +LI++Y K G++ A ++ + + D+
Sbjct: 311 LQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDV 370
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGI--DDVILCLMLNICANVASLNLGRQI 356
++ ++I +A+ + EA +LF+ LK MG+ + V +L C N + G QI
Sbjct: 371 VAINSMIYAYAQ-NGFGHEALELFER--LKNMGLVPNGVTFISILLACNNAGLVEEGCQI 427
Query: 357 HAFAFKYQSSYDAAVGN--ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG 414
A + + + + + + +ID+ +S + +A +E+ + +V+ W +L+ HG
Sbjct: 428 FA-SIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVRNPDVVLWRTLLNSCKIHG 486
>gi|115484979|ref|NP_001067633.1| Os11g0256100 [Oryza sativa Japonica Group]
gi|62734753|gb|AAX96862.1| Similar to selenium-binding protein [Oryza sativa Japonica Group]
gi|77549625|gb|ABA92422.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113644855|dbj|BAF27996.1| Os11g0256100 [Oryza sativa Japonica Group]
gi|125597201|gb|EAZ36981.1| hypothetical protein OsJ_21321 [Oryza sativa Japonica Group]
Length = 582
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 179/541 (33%), Positives = 297/541 (54%), Gaps = 8/541 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQN-G 110
IHA + G +N +T +I A + AR+ FD P R+ W ++ +A +
Sbjct: 44 IHARAVVLGISANPAFATSLITAVAPAC-LAYARRVFDAAPSRDAYMWNTLLRAHAHSRA 102
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
+ +AL +++ M +GV + +TY L ACA R + GR G + + FV S
Sbjct: 103 HARDALALYARMRAAGVAPDHYTYPIVLPACAAARAPRLGRAAHGDAVRFALARDGFVSS 162
Query: 171 ALLDLYAKCGWIEDAWILF-ERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
AL+ +Y++ G + DA +F ER + + VVSW AM+ G A F ++ LF M+ G+
Sbjct: 163 ALISMYSQEGEVRDAERVFAERDDARTVVSWTAMVAGYAQNCFFGEAVTLFSDMVAAGVL 222
Query: 230 PDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQ 288
P+ TL S L + G E + + + +H ++KLG +++ + +LI +Y + GS A
Sbjct: 223 PNEITLISFL-PCLRGQEWLPVGEMVHGFVVKLGFDANVPMVNALITMYGRCGSAPVARV 281
Query: 289 LYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
L+ M ++S +++ + + + +A F+ M+ +K+G D V L +L+ CA
Sbjct: 282 LFNGMSSRTLVSWNTMVAMYEQHGD-GVQAIKFFRRMLTEKVGFDCVTLVSVLSACARSG 340
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG--DKNVISWTSL 406
+L G+ +H A + DA +GN L+DMYAK GEIA A F G +V+SW+++
Sbjct: 341 ALGTGKWVHELARSHGLDTDARIGNVLVDMYAKCGEIAYAKEVFHSHGLRGHSVVSWSAM 400
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYR 466
I YA HG EA++L+ M++EG+ PN TF ++L AC H+GL EG + F + Y+
Sbjct: 401 INAYANHGEAEEALKLFSLMRNEGVRPNSFTFTAVLMACCHSGLVDEGLKHFNSIATDYQ 460
Query: 467 ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAA 526
+ P EH++C+VD+ R G+L AY +IR M I+P +W A LG C ++G L E A
Sbjct: 461 MSPTLEHYACMVDMLGRAGRLVEAYGIIRGMPIRPDKCVWGAFLGGCRLHGMVELAEYVA 520
Query: 527 RNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKNILL 586
+ LFD YV+++N+Y AG ++A + R +M+E L+K G+S + + ++ I +
Sbjct: 521 KELFDSGSNDVTFYVLMANMYFEAGMLEDAERIRGVMKEMELKKTAGHSLVCTDRERIAV 580
Query: 587 L 587
+
Sbjct: 581 V 581
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 124/261 (47%), Gaps = 4/261 (1%)
Query: 51 LIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
++H ++ G+++N+ + +I Y + G AR F+ M R +VSW M++ Y Q+G
Sbjct: 246 MVHGFVVKLGFDANVPMVNALITMYGRCGSAPVARVLFNGMSSRTLVSWNTMVAMYEQHG 305
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
A+ F ML V + T S L ACAR L G+ + + + + +
Sbjct: 306 DGVQAIKFFRRMLTEKVGFDCVTLVSVLSACARSGALGTGKWVHELARSHGLDTDARIGN 365
Query: 171 ALLDLYAKCGWIEDAWILFER--IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGM 228
L+D+YAKCG I A +F + VVSW+AMI A G +++ LF M +G+
Sbjct: 366 VLVDMYAKCGEIAYAKEVFHSHGLRGHSVVSWSAMINAYANHGEAEEALKLFSLMRNEGV 425
Query: 229 KPDCFTLGSILRASV-GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
+P+ FT ++L A G+ + + + + + + ++D+ + G + AY
Sbjct: 426 RPNSFTFTAVLMACCHSGLVDEGLKHFNSIATDYQMSPTLEHYACMVDMLGRAGRLVEAY 485
Query: 288 QLYRSM-LKTDIISCTALISG 307
+ R M ++ D A + G
Sbjct: 486 GIIRGMPIRPDKCVWGAFLGG 506
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 6/225 (2%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ G QA+KF + D T +S+L C A +H ++G +++
Sbjct: 303 QHGDGVQAIKFFRRMLTEKVGFDCVTLVSVLSACARSGALGTGKWVHELARSHGLDTDAR 362
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPER--NVVSWTAMISGYAQNGYDENALLVFSAMLR 124
+ ++ YAK G++ A++ F R +VVSW+AMI+ YA +G E AL +FS M
Sbjct: 363 IGNVLVDMYAKCGEIAYAKEVFHSHGLRGHSVVSWSAMINAYANHGEAEEALKLFSLMRN 422
Query: 125 SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKG-RFVENLFVKSALLDLYAKCGWIE 183
GVR N FT+++ L AC + G SI + L + ++D+ + G +
Sbjct: 423 EGVRPNSFTFTAVLMACCHSGLVDEGLKHFNSIATDYQMSPTLEHYACMVDMLGRAGRLV 482
Query: 184 DAWILFERIE-RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
+A+ + + R D W A +GG + G + + ++ + + G
Sbjct: 483 EAYGIIRGMPIRPDKCVWGAFLGGCRLHGMVELAEYVAKELFDSG 527
>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
sativa Japonica Group]
gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 702
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 173/541 (31%), Positives = 304/541 (56%), Gaps = 10/541 (1%)
Query: 40 CIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSW 99
C D A R +H+ + G+ + + + +I Y++ G + +A++ FDRM +VV +
Sbjct: 124 CADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGY 183
Query: 100 TAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQK 159
T++IS + +NG E A ML+ G++ N+ T ++ L AC R+ G+ I G + K
Sbjct: 184 TSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVL----GQQIHGYLIK 239
Query: 160 --GRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSF 217
G ++++ +AL+D Y++ G + A +F+ + K+VVSW +M+ G +++
Sbjct: 240 KIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEAL 299
Query: 218 WLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVY 277
+F M+ +G+ P+ F L SI+ + G I L + Q+H IK L + +++ +L+ +Y
Sbjct: 300 QVFGDMISEGVDPNEFAL-SIVLGACGSIGLGR--QLHCSAIKHDLITDIRVSNALLSMY 356
Query: 278 AKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVIL 337
+ G + + + D++S T IS ++ ++A L M + +
Sbjct: 357 GRTGLVEELEAMLNKIENPDLVSWTTAISANFQN-GFGEKAIALLCQMHSEGFTPNGYAF 415
Query: 338 CLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD 397
+L+ CA+VASL+ G Q H A K + GNALI+MY+K G++ A AFD M
Sbjct: 416 SSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHT 475
Query: 398 KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWEL 457
+V SW SLI G+A+HG ++A+E++ KM+ G+ P+D TFL +L C+H+G+ EG
Sbjct: 476 HDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELF 535
Query: 458 FTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
F MI++Y P H++C++D+ R G+ + A MI M +P A +W +L +C ++
Sbjct: 536 FRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHR 595
Query: 518 NTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
N +G+LAA L ++ S +YV++SNIY G W++ARK R+ M+E ++K+ G S++
Sbjct: 596 NLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWI 655
Query: 578 Q 578
+
Sbjct: 656 E 656
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 148/529 (27%), Positives = 264/529 (49%), Gaps = 49/529 (9%)
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
L K + K G + A FDRMP +NVV+WT+++SGY +NG E AL +F+ M+ SG
Sbjct: 50 LECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESG 109
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
V N F ++AL ACA + L+ G + + F + ++ S L+++Y++CG + A
Sbjct: 110 VAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAK 169
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+F+R++ DVV + ++I G + + M++QG+KP+ T+ +IL A
Sbjct: 170 EVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTA----C 225
Query: 247 ELMKISQIHD-LIIKLGLESSNKLTGS-LIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
+ QIH LI K+GL S + + + LID Y++ G + A ++ S+ +++S ++
Sbjct: 226 PRVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSM 285
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
+ + R D +EA +F DMI + + ++ L ++L C S+ LGRQ+H A K+
Sbjct: 286 MQLYIR-DGRLEEALQVFGDMISEGVDPNEFALSIVLGAC---GSIGLGRQLHCSAIKHD 341
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
D V NAL+ MY ++G + + +++ + +++SWT+ I+ ++G+G +AI L
Sbjct: 342 LITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLC 401
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
+M EG PN F S+L +C+ +G + F + K + +++++++
Sbjct: 402 QMHSEGFTPNGYAFSSVLSSCADVASLDQGMQ-FHCLALKLGCDSEICTGNALINMYSKC 460
Query: 485 GQLESA----------------------------------YNMIRQMNIKPTASLWSAIL 510
GQ+ SA ++ +R IKP S + +L
Sbjct: 461 GQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVL 520
Query: 511 GACSIYGNTSLGELAARNLFD---MEPEKSVNYVVLSNIYTAAGAWDNA 556
C+ G GEL R + D P S +Y + ++ G +D A
Sbjct: 521 MGCNHSGMVEEGELFFRLMIDQYSFTPAPS-HYACMIDMLGRNGRFDEA 568
>gi|226505108|ref|NP_001141927.1| uncharacterized protein LOC100274076 [Zea mays]
gi|194706472|gb|ACF87320.1| unknown [Zea mays]
gi|413938142|gb|AFW72693.1| hypothetical protein ZEAMMB73_533387 [Zea mays]
Length = 583
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 183/541 (33%), Positives = 286/541 (52%), Gaps = 6/541 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
D T+ + C + R +H + G+ S+ ++ ++ Y + DV +A
Sbjct: 36 FDHLTFTFAAKACAGLRLRRHGRAVHGRALAAGFGSDAYVQNAIVSMYMRCRDVAAAEAV 95
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F +P R VSW +I+G ++G E AL VF M+ GV ++ + S L ACA+ R L
Sbjct: 96 FVALPSRTTVSWNTVITGCVKDGRAERALEVFETMVDRGVCIDRASVVSVLPACAQARDL 155
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILF-ERIERKDVVSWNAMIGG 206
GR + + + VK+AL+D+Y KCG +EDA +F E KDVVSW MIG
Sbjct: 156 HTGRAVHRLAVVRGLGKYVAVKNALIDMYGKCGSLEDARRVFDEDSYDKDVVSWTVMIGA 215
Query: 207 LAMQGFNDDSFWLFRSMMRQG-MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
+ +F L M+ +P+ T+ +L A + H L I+LGL S
Sbjct: 216 YVLNDHASKAFALGSEMLVSSEAQPNAVTMAHLLSACASLLSGKHAKCTHALCIRLGLGS 275
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLY-RSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ +L+D YAK G + + + +T+ + A ISG+ + D K+A LFK
Sbjct: 276 DIVVETALVDCYAKCGYMGVIDMVVEKGSRRTE--TWNAAISGYTQRDQ-GKKALALFKR 332
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M+ + + D + ++ A A L IH + LID+YAK+G+
Sbjct: 333 MLAESVRPDSATMASVIPAYAESADLVQANNIHCCLLVRGCLVSTDIATGLIDLYAKAGD 392
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ A F + +K+V++WT++IAGY HG+ A+ LY +M G++PN VT SLL +
Sbjct: 393 LGVAWELFQCLPEKDVVAWTTVIAGYGMHGHAQTAMLLYSRMVELGVMPNTVTIASLLHS 452
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
CSH G+ EG LF DM + ++P AEH+ C+VD+ R G++E AY I M +PT S
Sbjct: 453 CSHAGMVDEGLRLFNDMHGVHGLMPNAEHYLCLVDMLGRAGRIEEAYRRIEDMPFEPTVS 512
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
+WS++LGAC ++ N GE+AA++LF++EP+ NYV+L +Y AA W + + R++ME
Sbjct: 513 VWSSLLGACVLHENVEFGEVAAKHLFELEPDNVGNYVLLGKVYAAAERWSDVQHLRRVME 572
Query: 565 E 565
E
Sbjct: 573 E 573
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 205/422 (48%), Gaps = 16/422 (3%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPD--TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
++ K G+ ++AL+ + D +D ++ +S+L C + +H +
Sbjct: 109 TVITGCVKDGRAERALEVFETMVDRGVCIDRASVVSVLPACAQARDLHTGRAVHRLAVVR 168
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP-ERNVVSWTAMISGYAQNGYDENALLV 118
G + + +I Y K G + AR+ FD +++VVSWT MI Y N + A +
Sbjct: 169 GLGKYVAVKNALIDMYGKCGSLEDARRVFDEDSYDKDVVSWTVMIGAYVLNDHASKAFAL 228
Query: 119 FSAMLRSG-VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYA 177
S ML S + N T + L ACA + + + + ++ V++AL+D YA
Sbjct: 229 GSEMLVSSEAQPNAVTMAHLLSACASLLSGKHAKCTHALCIRLGLGSDIVVETALVDCYA 288
Query: 178 KCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGS 237
KCG++ ++ E+ R+ +WNA I G + + LF+ M+ + ++PD T+ S
Sbjct: 289 KCGYMGVIDMVVEKGSRR-TETWNAAISGYTQRDQGKKALALFKRMLAESVRPDSATMAS 347
Query: 238 ILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
++ A +L++ + IH ++ G S + LID+YAK G + A++L++ + + D
Sbjct: 348 VIPAYAESADLVQANNIHCCLLVRGCLVSTDIATGLIDLYAKAGDLGVAWELFQCLPEKD 407
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
+++ T +I+G+ H++ A L+ M+ + + V + +L+ C++ ++ G ++
Sbjct: 408 VVAWTTVIAGYGM-HGHAQTAMLLYSRMVELGVMPNTVTIASLLHSCSHAGMVDEGLRL- 465
Query: 358 AFAFKYQSSYDAAVGNA-----LIDMYAKSGEIADANRAFDEMGDKNVIS-WTSLIAGYA 411
F + NA L+DM ++G I +A R ++M + +S W+SL+
Sbjct: 466 ---FNDMHGVHGLMPNAEHYLCLVDMLGRAGRIEEAYRRIEDMPFEPTVSVWSSLLGACV 522
Query: 412 KH 413
H
Sbjct: 523 LH 524
>gi|356525712|ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 691
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 163/456 (35%), Positives = 271/456 (59%), Gaps = 3/456 (0%)
Query: 133 TYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI 192
TY + + AC +R ++G + + + F +L+V + +L ++ KCG + DA LF+ +
Sbjct: 120 TYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNRVLFMHVKCGLMLDARKLFDEM 179
Query: 193 ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS 252
KDV SW M+GGL G ++F LF M ++ T +++RAS G+ L+++
Sbjct: 180 PEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIRAS-AGLGLVQVG 238
Query: 253 -QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD 311
QIH +K G+ + ++ +LID+Y+K GSI A+ ++ M + + ++I+ +A
Sbjct: 239 KQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALH 298
Query: 312 DNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAV 371
+S+EA L+ +M +D + +++ ICA +ASL +Q HA ++ + D
Sbjct: 299 -GYSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEHAKQAHAALVRHGFATDIVA 357
Query: 372 GNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGM 431
AL+D Y+K G + DA F+ M KNVISW +LIAGY HG G EA+E++++M EG+
Sbjct: 358 NTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGNHGQGQEAVEMFEQMLQEGV 417
Query: 432 VPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAY 491
P VTFL++L ACS++GL+ GWE+F M +++ PRA H++C+++L R L+ AY
Sbjct: 418 TPTHVTFLAVLSACSYSGLSQRGWEIFYSMKRDHKVKPRAMHYACMIELLGRESLLDEAY 477
Query: 492 NMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAG 551
+IR KPTA++W+A+L AC ++ N LG+LAA L+ MEPEK NY+VL N+Y ++G
Sbjct: 478 ALIRTAPFKPTANMWAALLTACRMHKNLELGKLAAEKLYGMEPEKLCNYIVLLNLYNSSG 537
Query: 552 AWDNARKTRKLMEERSLRKNPGYSFLQSSKKNILLL 587
A + ++++ LR P S+++ K+ L
Sbjct: 538 KLKEAAGILQTLKKKGLRMLPACSWVEVKKQPYAFL 573
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 167/315 (53%), Gaps = 1/315 (0%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
STY +L+ C+ ++ R + ++I +G+E +L++ +V+ + K G +L ARK FD
Sbjct: 119 STYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNRVLFMHVKCGLMLDARKLFDE 178
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
MPE++V SW M+ G G A +F M + T+++ +RA A + +Q G
Sbjct: 179 MPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIRASAGLGLVQVG 238
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ I K ++ FV AL+D+Y+KCG IEDA +F+++ K V WN++I A+
Sbjct: 239 KQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALH 298
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
G+++++ L+ M G D FT+ ++R L Q H +++ G +
Sbjct: 299 GYSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEHAKQAHAALVRHGFATDIVAN 358
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
+L+D Y+K+G + A ++ M ++IS ALI+G+ + +EA ++F+ M+ + +
Sbjct: 359 TALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYG-NHGQGQEAVEMFEQMLQEGV 417
Query: 331 GIDDVILCLMLNICA 345
V +L+ C+
Sbjct: 418 TPTHVTFLAVLSACS 432
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 100/197 (50%), Gaps = 2/197 (1%)
Query: 16 ALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFY 75
+L F + T +D T +++ C + A HA ++ +G+ +++ +T ++ FY
Sbjct: 306 SLYFEMRDSGTTVDHFTISIVIRICARLASLEHAKQAHAALVRHGFATDIVANTALVDFY 365
Query: 76 AKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYS 135
+K G + AR F+RM +NV+SW A+I+GY +G + A+ +F ML+ GV T+
Sbjct: 366 SKWGRMEDARHVFNRMRHKNVISWNALIAGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFL 425
Query: 136 SALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA-LLDLYAKCGWIEDAWILFERIER 194
+ L AC+ Q G I S+++ V+ + A +++L + +++A+ L
Sbjct: 426 AVLSACSYSGLSQRGWEIFYSMKRDHKVKPRAMHYACMIELLGRESLLDEAYALIRTAPF 485
Query: 195 KDVVS-WNAMIGGLAMQ 210
K + W A++ M
Sbjct: 486 KPTANMWAALLTACRMH 502
>gi|356551361|ref|XP_003544044.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 688
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 186/601 (30%), Positives = 322/601 (53%), Gaps = 57/601 (9%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
+TY S+L C +Q +HAH I +G+ ++ ++TK++ YA+ +A FD
Sbjct: 52 TTYASILDSCGSPILGKQ---LHAHSIKSGFNAHEFVTTKLLQMYARNCSFENACHVFDT 108
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA--NQFTYSSALRACARMRWLQ 148
MP RN+ SWTA++ Y + G+ E A +F +L GVR + F + L+ C + ++
Sbjct: 109 MPLRNLHSWTALLRVYIEMGFFEEAFFLFEQLLYEGVRVRLDFFVFPVVLKICCGLCAVE 168
Query: 149 GGRMIQGSIQK------------GRFVENLFVK-SALLDLYAKCGWIEDAWILFERIER- 194
GR + G K RF +A++ Y + G + A LF+R+E+
Sbjct: 169 LGRQMHGMALKHDGDMKSAFEMFSRFSRKSAASYNAMIAGYWENGNLFKAKELFDRMEQE 228
Query: 195 ---KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI 251
KD +SWN+MI G D+++ LFR ++++G++PD FTLGS+L + +
Sbjct: 229 GVQKDRISWNSMISGYVDGSLFDEAYSLFRDLLKEGIEPDSFTLGSVLAGCADMASIRRG 288
Query: 252 SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD 311
+ H L I GL+S++ + G+L+++Y+K I +A + + + D+ + ALISG+AR
Sbjct: 289 KEAHSLAIVRGLQSNSIVGGALVEMYSKCQDIVAAQMAFDGVSERDLPTWNALISGYARC 348
Query: 312 DNHSK----------------------------------EAFDLFKDMILKKMGIDDVIL 337
+ K A LF +M + + D +
Sbjct: 349 NQAEKIRELHQKMRRDGFEPNVYTWNGIIAGYVENKQYDSAMQLFTEMQIANLRPDIYTV 408
Query: 338 CLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD 397
++L C+ +A++ G+Q+HA++ + D +G AL+DMYAK G++ R ++ + +
Sbjct: 409 GIILAACSRLATIQRGKQVHAYSIRAGHDSDVHIGAALVDMYAKCGDVKHCYRVYNMISN 468
Query: 398 KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWEL 457
N++S +++ YA HG+G E I L+++M + P+ VTFL++L +C H G G E
Sbjct: 469 PNLVSHNAMLTAYAMHGHGEEGIALFRRMLASKVRPDHVTFLAVLSSCVHAGSLEIGHEC 528
Query: 458 FTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
M+ Y ++P +H++C+VDL +R GQL AY +I+ + + A W+A+LG C I+
Sbjct: 529 LALMV-AYNVMPSLKHYTCMVDLLSRAGQLYEAYELIKNLPTEADAVTWNALLGGCFIHN 587
Query: 518 NTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
LGE+AA L ++EP NYV+L+N+Y +AG W +TR+LM++ ++K PG S++
Sbjct: 588 EVDLGEIAAEKLIELEPNNPGNYVMLANLYASAGKWHYLTQTRQLMKDMGMQKRPGCSWI 647
Query: 578 Q 578
+
Sbjct: 648 E 648
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 154/315 (48%), Gaps = 36/315 (11%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T S+L C D + R+ H+ I G +SN + ++ Y+K D+++A+ AF
Sbjct: 268 DSFTLGSVLAGCADMASIRRGKEAHSLAIVRGLQSNSIVGGALVEMYSKCQDIVAAQMAF 327
Query: 89 DRMPERNVVSWTAMISGYAQ------------------------------NGYDEN---- 114
D + ER++ +W A+ISGYA+ GY EN
Sbjct: 328 DGVSERDLPTWNALISGYARCNQAEKIRELHQKMRRDGFEPNVYTWNGIIAGYVENKQYD 387
Query: 115 -ALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALL 173
A+ +F+ M + +R + +T L AC+R+ +Q G+ + + ++ + +AL+
Sbjct: 388 SAMQLFTEMQIANLRPDIYTVGIILAACSRLATIQRGKQVHAYSIRAGHDSDVHIGAALV 447
Query: 174 DLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCF 233
D+YAKCG ++ + ++ I ++VS NAM+ AM G ++ LFR M+ ++PD
Sbjct: 448 DMYAKCGDVKHCYRVYNMISNPNLVSHNAMLTAYAMHGHGEEGIALFRRMLASKVRPDHV 507
Query: 234 TLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
T ++L + V L + L++ + S K ++D+ ++ G + AY+L +++
Sbjct: 508 TFLAVLSSCVHAGSLEIGHECLALMVAYNVMPSLKHYTCMVDLLSRAGQLYEAYELIKNL 567
Query: 294 -LKTDIISCTALISG 307
+ D ++ AL+ G
Sbjct: 568 PTEADAVTWNALLGG 582
>gi|147812109|emb|CAN61522.1| hypothetical protein VITISV_010801 [Vitis vinifera]
Length = 674
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 177/536 (33%), Positives = 293/536 (54%), Gaps = 11/536 (2%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HAH+I G + L L +V+ Y K + K FD MP +NVVSW +I G + G
Sbjct: 95 LHAHVIKLGXCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKNVVSWNTLICGVVE-GN 153
Query: 112 DENALL-----VFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENL 166
+ AL+ F M+ + N T + LRA + + R + I K F N
Sbjct: 154 CKFALVRLGFHCFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQLHCFILKSGFDSNC 213
Query: 167 FVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ 226
FV SAL+D YAK G +++A F+ + +D+V WN M+ A+ G +F +F+ M +
Sbjct: 214 FVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMRLE 273
Query: 227 GMKPDCFTLGSILRAS--VGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIR 284
G+K D FT S++ + +G L K Q+H LII+L + + +L+D+Y+K +I
Sbjct: 274 GVKGDXFTFTSMINSCGVLGSCGLGK--QVHGLIIRLSFDLDVLVASALVDMYSKNENIE 331
Query: 285 SAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNIC 344
A + + MJ +I+S T + G+ + + KE L ++MI D++ L +L+ C
Sbjct: 332 DARKAFDGMJVKNIVSWTTMXVGYGQHGD-GKEXMRLLQEMIRVYTYPDELALASILSSC 390
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWT 404
N+++ + Q+HA+ + ++ NAL+ Y+K G I A ++F + + ++ISWT
Sbjct: 391 GNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVAEPDIISWT 450
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK 464
SL+ YA HG + +++++K+ + P+ V FL +L AC+H G EG F MIN
Sbjct: 451 SLMGAYAFHGLSKQGVDVFEKILSSNVRPDKVAFLGVLSACAHGGFVLEGLHYFNLMINV 510
Query: 465 YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGEL 524
Y+I+P +EH++ ++DL R G L+ A N++ M ++P + A LGAC +Y N L
Sbjct: 511 YQIMPDSEHYTSIIDLLGRAGFLDEAVNLLTSMPVEPRSDTLGAFLGACKVYRNVGLARW 570
Query: 525 AARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSS 580
A+ LF MEP + Y ++SN+Y + G W + + RKLM ER K PG S+++++
Sbjct: 571 ASEKLFVMEPNEPGKYSLMSNMYASVGHWFDVARVRKLMRERCDFKVPGCSWMETA 626
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 202/403 (50%), Gaps = 29/403 (7%)
Query: 135 SSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER 194
S AL+ A++ +L GG+ + + K L +++ +L +Y KC D +F+ +
Sbjct: 77 SHALKISAKLGFLHGGKQLHAHVIKLGXCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPL 136
Query: 195 KDVVSWNAMIGGLAMQ----GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMK 250
K+VVSWN +I G+ F FR M+ + M P+C TL +LRAS+ ++
Sbjct: 137 KNVVSWNTLICGVVEGNCKFALVRLGFHCFRQMVLEMMAPNCITLNGLLRASIELNDVGI 196
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR 310
Q+H I+K G +S+ + +L+D YAK+G + A + + D++ ++S +A
Sbjct: 197 CRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYAL 256
Query: 311 DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA 370
+ K AF +FK M L+ + D M+N C + S LG+Q+H + D
Sbjct: 257 NGVQGK-AFGVFKLMRLEGVKGDXFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVL 315
Query: 371 VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG 430
V +AL+DMY+K+ I DA +AFD M KN++SWT++ GY +HG G E + L ++M
Sbjct: 316 VASALVDMYSKNENIEDARKAFDGMJVKNIVSWTTMXVGYGQHGDGKEXMRLLQEMIRVY 375
Query: 431 MVPNDVTFLSLLFACSHTGLTCE-----------GWELFTDMINKYRILPRAEHFSCVVD 479
P+++ S+L +C + T E G+E F + N +V
Sbjct: 376 TYPDELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANA------------LVS 423
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLG 522
+++ G + SA+ + +P W++++GA + +G + G
Sbjct: 424 AYSKCGSIGSAFQSFSSV-AEPDIISWTSLMGAYAFHGLSKQG 465
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 87/161 (54%), Gaps = 1/161 (0%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
T D S+L C + A + +HA+++ NG+E+ L ++ ++ Y+K G + SA
Sbjct: 376 TYPDELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAF 435
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
++F + E +++SWT+++ YA +G + + VF +L S VR ++ + L ACA
Sbjct: 436 QSFSSVAEPDIISWTSLMGAYAFHGLSKQGVDVFEKILSSNVRPDKVAFLGVLSACAHGG 495
Query: 146 W-LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
+ L+G I + + + ++++DL + G++++A
Sbjct: 496 FVLEGLHYFNLMINVYQIMPDSEHYTSIIDLLGRAGFLDEA 536
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 159/428 (37%), Positives = 250/428 (58%), Gaps = 1/428 (0%)
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ + + + +L V + LL + AK + A +LF ++E +D VSW+ MIGG
Sbjct: 20 KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKN 79
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
G + F FR ++R G KPD F+L +++A + L+ IH ++K GL N +
Sbjct: 80 GDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVC 139
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
+L+D+YAK G I +A QL+ M K D+++ T +I+G+A + E++ LF M
Sbjct: 140 STLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYA-ECGKPNESWVLFDQMRRDGF 198
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
D V + ++N CA + ++N R +H + + S D +G A+IDMYAK G I +
Sbjct: 199 VPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSRE 258
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
FD M KNVISW+++I Y HG G EA+EL+ M + G++PN +TF+SLL+ACSH GL
Sbjct: 259 IFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGL 318
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
+G +LF+ M Y + P +H++C+VDL R G+L+ A +I M ++ +W A L
Sbjct: 319 VDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFL 378
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
GAC I+ L E AA+ L ++ + +Y++LSNIY AG W + K R LM +R L+K
Sbjct: 379 GACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMAKRRLKK 438
Query: 571 NPGYSFLQ 578
PGY++++
Sbjct: 439 IPGYTWIE 446
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 200/388 (51%), Gaps = 6/388 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+DP ++S L C + +Q +HA + T G +L ++ K++ AK D+++A
Sbjct: 1 MDPDFFISTLFKCRNIFQIKQ---VHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLL 57
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F++M ER+ VSW+ MI G+ +NG E F ++R+G + + F+ ++AC L
Sbjct: 58 FNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGL 117
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
GR+I ++ K + FV S L+D+YAKCG I++A LF+R+ +KD+V+ MI G
Sbjct: 118 IMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGY 177
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A G ++S+ LF M R G PD + +I+ A + K +HD +
Sbjct: 178 AECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDV 237
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+L ++ID+YAK GSI S+ +++ M + ++IS +A+I + +EA +LF M+
Sbjct: 238 ELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGY-HGQGREALELFHMMLN 296
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAF-AFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ + + +L C++ ++ G Q+ + + Y D ++D+ ++G +
Sbjct: 297 SGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLD 356
Query: 387 DANRAFDEMG-DKNVISWTSLIAGYAKH 413
A R + M +K+ W + + H
Sbjct: 357 QALRLIENMEVEKDEGIWCAFLGACRIH 384
>gi|449451649|ref|XP_004143574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
gi|449516723|ref|XP_004165396.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 186/579 (32%), Positives = 303/579 (52%), Gaps = 5/579 (0%)
Query: 4 VRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGY 61
+R G +AL L P+ T+ L + C + +IH H++ + +
Sbjct: 24 IRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVVKSPF 83
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSA 121
S++++ T ++ Y K G V A FD+MP RN+ SW AMI G++Q G + +F
Sbjct: 84 YSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFNLFMG 143
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
M G R + T RA + L+ + + + + V + + Y+KCG
Sbjct: 144 MRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSNTWIAAYSKCGE 203
Query: 182 IEDAWILFERIER--KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
++ A ++F I++ + VSWN++I A G D+ ++ ++ G KPD T+ S+L
Sbjct: 204 LQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDASTIISLL 263
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
+ L+ IH +LG +S L +LI +Y++ G I SA L+ M +
Sbjct: 264 SSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILFDGMSIRTCV 323
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
S TA+ISG++ + +A LF M D V + +++ C +L LG I +
Sbjct: 324 SWTAMISGYS-EVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALGLGHWIDNY 382
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
A ++ D V NALIDMYAK G + DA F + ++ V+SWT++IA A +G EA
Sbjct: 383 ASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPNRTVVSWTAMIAACALNGEFREA 442
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD 479
++L+ + G+ PN++TFL++L AC H G +G E F M +Y I P +H+SC++D
Sbjct: 443 LDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGRECFMMMTERYGINPGLDHYSCMID 502
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVN 539
L R+G+L A +I+ M +KP +W A+LGAC I+ N +GE +R LF+++P +V+
Sbjct: 503 LLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHNNMEIGEYVSRYLFELQPRVAVS 562
Query: 540 YVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+V ++NIY + G WD RK M +RK+PG S +Q
Sbjct: 563 FVEMANIYASVGRWDEVAAMRKTMRSNQMRKSPGKSVVQ 601
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/487 (27%), Positives = 244/487 (50%), Gaps = 25/487 (5%)
Query: 99 WTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQ 158
W + I G G AL +F + +G++ N FT+ +ACA++ L ++I +
Sbjct: 20 WNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVV 79
Query: 159 KGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFW 218
K F +++V++A++D+Y KCG ++DA+ LF+++ +++ SWNAMI G + G D F
Sbjct: 80 KSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFN 139
Query: 219 LFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYA 278
LF M G +PD T+ + RA + L + +H + I+ GL++ ++ + I Y+
Sbjct: 140 LFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSNTWIAAYS 199
Query: 279 KYGSIRSAYQLYRSMLKT--DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVI 336
K G ++ A ++ + KT +S +LI+ +A + +A +K ++ D
Sbjct: 200 KCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYV-DAVKSYKGLLCDGFKPDAST 258
Query: 337 LCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG 396
+ +L+ C +L G IH F+ D ++ N LI MY++ G+I+ A FD M
Sbjct: 259 IISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILFDGMS 318
Query: 397 DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG-W 455
+ +SWT++I+GY++ G +A+ L+ M+ G P+ VT LSL+ C TG G W
Sbjct: 319 IRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALGLGHW 378
Query: 456 ELFTDMINKYRILP--RAEHFSC--VVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
I+ Y L + + C ++D++A+ G L A + + + S W+A++
Sbjct: 379 ------IDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPNRTVVS-WTAMIA 431
Query: 512 ACSIYGNTSLGELAARNLFDMEPE-----KSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
AC++ G A +LF + E ++ ++ + G + R+ +M ER
Sbjct: 432 ACALNGEFR----EALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGRECFMMMTER 487
Query: 567 SLRKNPG 573
NPG
Sbjct: 488 -YGINPG 493
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 179/534 (33%), Positives = 292/534 (54%), Gaps = 42/534 (7%)
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
A F+ +PE N + W M G+A + +AL ++ M+ G+ N FT+ L++CA+
Sbjct: 28 AISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAK 87
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER------------ 191
+ + G+ I G + K F +L+V ++L+ +YA+ G +EDA +F+R
Sbjct: 88 SKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTAL 147
Query: 192 -------------------IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDC 232
I KDVVSWNAMI G A G + LF+ MM+ +KPD
Sbjct: 148 ITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDE 207
Query: 233 FTLGSILRASV--GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
T+ +++ A G IEL + Q+H I G S+ K+ +LID+Y+K G + +A +L
Sbjct: 208 STMATVVSACAQSGSIELGR--QVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELL 265
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
+ D+IS LI G+ N KEA LF++M+ +DV + +L CA++ ++
Sbjct: 266 EGLSNKDVISWNTLIGGYTHM-NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 324
Query: 351 NLGRQIHAFAFKYQS----SYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTS 405
++GR IH + K + +++ +LIDMYAK G+I A + D ++++ +W +
Sbjct: 325 DIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNA 384
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
+I G+A HG + A +++ +M+ G+ P+D+TF+ LL ACSH+G+ G +F M Y
Sbjct: 385 MIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDY 444
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
I P+ EH+ C++DL G + A MI M ++P +W ++L AC I+GN LGE
Sbjct: 445 NITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESF 504
Query: 526 ARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKN-PGYSFLQ 578
A+ L +EPE +YV+LSNIY AG W+ K R L+ ++ ++K PG S ++
Sbjct: 505 AKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIE 558
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 140/456 (30%), Positives = 226/456 (49%), Gaps = 44/456 (9%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVG------------ 79
T+ LL+ C K ++ IH H++ G++ +L++ T +I YA+ G
Sbjct: 77 TFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRS 136
Query: 80 ---DVLS----------------ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
DV+S A+K FD +P ++VVSW AMISGYA+ G + AL +F
Sbjct: 137 SHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFK 196
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M+++ V+ ++ T ++ + ACA+ ++ GR + I F NL + +AL+DLY+KCG
Sbjct: 197 EMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCG 256
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+E A L E + KDV+SWN +IGG ++ LF+ M+R G P+ T+ SIL
Sbjct: 257 EVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILP 316
Query: 241 --ASVGGIELMKISQIHDLIIK----LGLESSNKLTGSLIDVYAKYGSIRSAYQLY-RSM 293
A +G I++ + IH I K + + +++ L SLID+YAK G I +A Q+ S
Sbjct: 317 ACAHLGAIDIGR--WIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSA 374
Query: 294 LKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG 353
+ + A+I GFA + AFD+F M + DD+ +L+ C++ L+LG
Sbjct: 375 FNRSLSTWNAMIFGFAM-HGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLG 433
Query: 354 RQI-HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYA 411
R I + Y + +ID+ SG +A + M + + + W SL+
Sbjct: 434 RNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACK 493
Query: 412 KHGYGHEAIELYKKM-KHEGMVPNDVTFLSLLFACS 446
HG KK+ K E P LS ++A +
Sbjct: 494 IHGNLELGESFAKKLIKIEPENPGSYVLLSNIYATA 529
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 181/404 (44%), Gaps = 52/404 (12%)
Query: 9 KTGQLKQALKFSLSCPDTLLDP--STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+TG K+AL+ T + P ST +++ C + +H+ I +G+ SNL
Sbjct: 184 ETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLK 243
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ +I Y+K G+V +A + + + ++V+SW +I GY + ALL+F MLRSG
Sbjct: 244 IVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG 303
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQ---KGRFVENL-FVKSALLDLYAKCGWI 182
N T S L ACA + + GR I I KG V N ++++L+D+YAKCG I
Sbjct: 304 ETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDI 363
Query: 183 EDAWILFERIE-RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
+ A + + + + +WNAMI G AM G + +F +F M + G++PD T +L A
Sbjct: 364 DAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSA 423
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC 301
H ++ LG RS Q Y K + C
Sbjct: 424 CS-----------HSGMLDLG-----------------RNIFRSMRQDYNITPKLEHYGC 455
Query: 302 TALISGFARDDNHS---KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
+ G HS KEA ++ M M D VI C +L C +L LG +
Sbjct: 456 MIDLLG------HSGLFKEAEEMINTM---PMEPDGVIWCSLLKACKIHGNLELGE---S 503
Query: 359 FAFKYQSSYDAAVGNALI--DMYAKSGEIADANRAFDEMGDKNV 400
FA K G+ ++ ++YA +G+ + + + DK +
Sbjct: 504 FAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGM 547
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 193/572 (33%), Positives = 307/572 (53%), Gaps = 52/572 (9%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIF-----------------YAKV 78
L + D+ ER L+ +++ GY N +L +F YA+
Sbjct: 108 LARMLFDEMPERD--LVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQN 165
Query: 79 GDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSAL 138
G V AR+ FDRMPE+N VSW A++S Y QN E A ++F G R N
Sbjct: 166 GCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLF------GSRENW------- 212
Query: 139 RACARMRW--LQGGRMIQGSIQKGR-FVENLFVK-----SALLDLYAKCGWIEDAWILFE 190
A + W L GG + + I + R F +++ V+ + ++ YA+ G I++A LF+
Sbjct: 213 ---ALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFD 269
Query: 191 RIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMK 250
DV +W AM+ G +++ LF M + + + ++L V G +
Sbjct: 270 ESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPER----NEVSWNAMLAGYVQGERVEM 325
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR 310
++ D++ + + N ++I YA+ G I A L+ M K D +S A+I+G+++
Sbjct: 326 AKELFDVMPCRNVSTWN----TMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQ 381
Query: 311 DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA 370
HS EA LF M + ++ L+ CA+V +L LG+Q+H K
Sbjct: 382 S-GHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCF 440
Query: 371 VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG 430
VGNAL+ MY K G I +AN F EM K+++SW ++IAGY++HG+G EA+ ++ MK EG
Sbjct: 441 VGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREG 500
Query: 431 MVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA 490
+ P+D T +++L ACSHTGL +G + F M Y + P ++H++C+VDL R G LE A
Sbjct: 501 LKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEA 560
Query: 491 YNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAA 550
+N+++ M +P A++W +LGA ++GNT L E AA +F MEPE S YV+LSN+Y ++
Sbjct: 561 HNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASS 620
Query: 551 GAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
G W + K R M ++ ++K PGYS+++ K
Sbjct: 621 GRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNK 652
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 119/469 (25%), Positives = 219/469 (46%), Gaps = 40/469 (8%)
Query: 72 IIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQ 131
I Y + G A + F RMP + VS+ AMISGY +NG E A ++F M +
Sbjct: 66 ISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDL---- 121
Query: 132 FTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER 191
+++ ++ R R L R + + + ++ + +L YA+ G ++DA +F+R
Sbjct: 122 VSWNVMIKGYVRNRNLGKARELFERMPE----RDVCSWNTILSGYAQNGCVDDARRVFDR 177
Query: 192 IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI 251
+ K+ VSWNA++ +++ LF S + LG ++ ++++
Sbjct: 178 MPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVKKK----KIVEA 233
Query: 252 SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD 311
Q D + + S N ++I YA+ G I A QL+ D+ + TA++SG+ +
Sbjct: 234 RQFFDSMKVRDVVSWN----TIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQ- 288
Query: 312 DNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAV 371
+ +EA +LF M + ++V ML + + +++ F + +
Sbjct: 289 NRMVEEARELFDRMPER----NEVSWNAMLAGYVQGERVEMAKEL----FDVMPCRNVST 340
Query: 372 GNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGM 431
N +I YA+ G+I++A FD+M ++ +SW ++IAGY++ G+ +EA+ L+ M+ EG
Sbjct: 341 WNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGG 400
Query: 432 VPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD-----LFARRGQ 486
N +F S L C+ G +L R++ C V ++ + G
Sbjct: 401 RLNRSSFSSALSTCADVVALELGKQLHG------RLVKGGYETGCFVGNALLLMYCKCGS 454
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPE 535
+E A ++ ++M K S W+ ++ S +G GE A R M+ E
Sbjct: 455 IEEANDLFKEMAGKDIVS-WNTMIAGYSRHG---FGEEALRFFESMKRE 499
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L+ S++ S L C D A +H ++ GYE+ + +++ Y K G + A
Sbjct: 402 LNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDL 461
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F M +++VSW MI+GY+++G+ E AL F +M R G++ + T + L AC+ +
Sbjct: 462 FKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLV 521
Query: 148 QGGRMIQGSIQKGRFVE-NLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIG 205
GR ++ + V N + ++DL + G +E+A L + + D W ++G
Sbjct: 522 DKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLG 581
Query: 206 GLAMQG 211
+ G
Sbjct: 582 ASRVHG 587
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 96/236 (40%), Gaps = 40/236 (16%)
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
FK + + NA+I Y ++GE A FDEM +++++SW +I GY ++ +A
Sbjct: 82 FKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKAR 141
Query: 421 ELYKKMKHEGMV---------------------------PNDVTFLSLLFACSHTGLTCE 453
EL+++M + NDV++ +LL A E
Sbjct: 142 ELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEE 201
Query: 454 GWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGAC 513
LF N + ++C++ F ++ ++ A M ++ S W+ I
Sbjct: 202 ACVLFGSRENWALV-----SWNCLLGGFVKKKKIVEARQFFDSMKVRDVVS-WNTI---- 251
Query: 514 SIYGNTSLGEL-AARNLFDMEPEKSV-NYVVLSNIYTAAGAWDNARKTRKLMEERS 567
I G GE+ AR LFD P V + + + Y + AR+ M ER+
Sbjct: 252 -ITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPERN 306
>gi|297739749|emb|CBI29931.3| unnamed protein product [Vitis vinifera]
Length = 838
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 188/613 (30%), Positives = 324/613 (52%), Gaps = 54/613 (8%)
Query: 19 FSLSCPDTLL-DPSTYMSLLQFCIDKKAERQ-AHLIHAHIITNGYESNLHLSTKVIIFYA 76
FSL + + D ST+ S+L+ C KA Q IHA II +G+ S+ + +I Y+
Sbjct: 99 FSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYS 158
Query: 77 KVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSS 136
K G V A+ F+R+ ++ VSW AMISG +QNG ++ A+L+F M +S V + +SS
Sbjct: 159 KNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSS 218
Query: 137 ALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKD 196
L AC ++ + G + G I K FV +AL+ LY++ G + A +F ++ R+D
Sbjct: 219 VLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRD 278
Query: 197 VVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHD 256
+S+N++I GLA +GF+D + LF M MKPDC T+ S+L A K Q+H
Sbjct: 279 RISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHS 338
Query: 257 LIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSK 316
+IK+G+ S + GSL+D+Y K I +A++ + + +++ ++ + + N S
Sbjct: 339 YVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLS- 397
Query: 317 EAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALI 376
E++ +F M ++ + + +L C ++ +L+LG QIH K ++ V + LI
Sbjct: 398 ESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLI 457
Query: 377 DMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDV 436
DMYAK GE+ A + +++V+SWT++IAGY +H EA++L+++M+++G+ +++
Sbjct: 458 DMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNI 517
Query: 437 TFLSLLFACSHTGLTCEGWEL---------------------------------FTDMIN 463
F S + AC+ +G ++ D
Sbjct: 518 GFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALASNVLITLYSKCGSIEDAKR 577
Query: 464 KYRILPRAE---------------HFSCVVDLFARRGQL---ESAYNMIRQMNIKPTASL 505
++ +P + S V LF QL + + +M I+P A +
Sbjct: 578 EFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGEMPIEPDAMI 637
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
W +L AC+++ N +GE AAR+L ++EPE S YV+LSN+Y +G WD +TR++M++
Sbjct: 638 WRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKD 697
Query: 566 RSLRKNPGYSFLQ 578
R ++K PG S+++
Sbjct: 698 RGVKKEPGRSWIE 710
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 150/483 (31%), Positives = 258/483 (53%), Gaps = 6/483 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
TY+ L + C + + A +HA I +G++ L +++I Y G+V +A K FD +
Sbjct: 12 TYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDI 71
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW-LQGG 150
P NV W +ISG L +FS M+ V ++ T++S LRAC+ + Q
Sbjct: 72 PSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVT 131
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
I I F + V + L+DLY+K G ++ A ++FER+ KD VSW AMI GL+
Sbjct: 132 EQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQN 191
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI-SQIHDLIIKLGLESSNKL 269
G D++ LF M + + P + S+L A IEL K+ Q+H I+K GL S +
Sbjct: 192 GREDEAILLFCQMHKSAVIPTPYVFSSVLSACT-KIELFKLGEQLHGFIVKWGLSSETFV 250
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+L+ +Y+++G++ +A Q++ M + D IS +LISG A+ S A LF+ M L
Sbjct: 251 CNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQ-RGFSDRALQLFEKMQLDC 309
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
M D V + +L+ CA+V + G+Q+H++ K S D + +L+D+Y K +I A+
Sbjct: 310 MKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAH 369
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
F +NV+ W ++ Y + G E+ ++ +M+ EG++PN T+ S+L C+ G
Sbjct: 370 EYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLG 429
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
G ++ T +I K S ++D++A+ G+L++A +++++ + S W+A+
Sbjct: 430 ALDLGEQIHTQVI-KSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVS-WTAM 487
Query: 510 LGA 512
+
Sbjct: 488 IAG 490
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 135/483 (27%), Positives = 224/483 (46%), Gaps = 38/483 (7%)
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
M G+RAN TY C L + + I K F + S L+D+Y G
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
+++A LF+ I +V WN +I GL + LF M+ + + PD T S+LRA
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 242 SVGGIELMKIS-QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
GG +++ QIH II G SS + LID+Y+K G + A ++ + D +S
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
A+ISG ++ + EA LF M + + +L+ C + LG Q+H F
Sbjct: 181 WVAMISGLSQ-NGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFI 239
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
K+ S + V NAL+ +Y++ G + A + F +M ++ IS+ SLI+G A+ G+ A+
Sbjct: 240 VKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRAL 299
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI------------------ 462
+L++KM+ + M P+ VT SLL AC+ G +G +L + +I
Sbjct: 300 QLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLY 359
Query: 463 ---------NKYRILPRAEH---FSCVVDLFARRGQLESAYNMIRQMNIK---PTASLWS 507
++Y + E+ ++ ++ + + G L +Y + QM I+ P +
Sbjct: 360 VKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYP 419
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYV--VLSNIYTAAGAWDNARKTRKLMEE 565
+IL C+ G LGE + + +V YV VL ++Y G D AR + + E
Sbjct: 420 SILRTCTSLGALDLGEQIHTQVIKSGFQFNV-YVCSVLIDMYAKHGELDTARGILQRLRE 478
Query: 566 RSL 568
+
Sbjct: 479 EDV 481
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 182/582 (31%), Positives = 301/582 (51%), Gaps = 68/582 (11%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYE-SNLHLSTKVIIFYAKVGDVLSARKA 87
+ +Y LL C+ QA + H+ + Y+ ++ L +++ YAK G++ AR
Sbjct: 21 NSESYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQNRLLHLYAKSGNLSDARDL 80
Query: 88 FDRMPERNVVSWTAMISGYAQ-------------------------------NGYDENAL 116
FD+M R+V SW AM+S Y++ NG AL
Sbjct: 81 FDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQAL 140
Query: 117 LVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLY 176
F M G + +T+ S L AC+++ ++ G+ I G I E++FV +AL ++Y
Sbjct: 141 EFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMY 200
Query: 177 AKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLG 236
AKCG ++ A LF+R+ K+VVSWN+MI G G + LF M G+ PD T+
Sbjct: 201 AKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTIS 260
Query: 237 SILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT 296
+IL A Y + G I A + +R + +
Sbjct: 261 NILSA-----------------------------------YFQCGYIDEACKTFREIKEK 285
Query: 297 DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI 356
D + T ++ G A+ + ++A LF++M+L+ + D+ + +++ CA +ASL G+ +
Sbjct: 286 DKVCWTTMMVGCAQ-NGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAV 344
Query: 357 HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYG 416
H A + +D V +AL+DMY+K GE ADA F M +NVISW S+I GYA++G
Sbjct: 345 HGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKD 404
Query: 417 HEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSC 476
EA+ LY++M HE + P+++TF+ +L AC H GL G F + + + P +H+SC
Sbjct: 405 LEALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSC 464
Query: 477 VVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEK 536
+++L R G ++ A ++I+ M +P +WS +L C I + + GE+AAR+LF+++P
Sbjct: 465 MINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHN 524
Query: 537 SVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+ Y++LSNIY A G W + R LM+ ++K YS+++
Sbjct: 525 AGPYIMLSNIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIE 566
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 117/447 (26%), Positives = 202/447 (45%), Gaps = 72/447 (16%)
Query: 2 NIVRANFK-TGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIIT 58
N V A F G QAL+F + + + + T++S+L C ++ IH I+
Sbjct: 124 NTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVA 183
Query: 59 NGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLV 118
++ + + YAK G + AR FDRM +NVVSW +MISGY QNG E +
Sbjct: 184 TSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKL 243
Query: 119 FSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
F M SG+ +Q T S+ L A Y +
Sbjct: 244 FCEMQSSGLMPDQVTISNILSA-----------------------------------YFQ 268
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
CG+I++A F I+ KD V W M+ G A G +D+ LFR M+ + ++PD FT+ S+
Sbjct: 269 CGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSV 328
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
+ + L + +H + G++ ++ +L+D+Y+K G A+ +++ ML ++
Sbjct: 329 VSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNV 388
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA 358
IS ++I G+A+ + EA L+++M+ + + D++ +L+ C + + G+
Sbjct: 389 ISWNSMILGYAQ-NGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQ---- 443
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHE 418
+ Y S +I N FD ++ +I + GY +
Sbjct: 444 -GYFYSIS-----------------KIHGMNPTFDH--------YSCMINLLGRAGYMDK 477
Query: 419 AIELYKKMKHEGMVPNDVTFLSLLFAC 445
A++L K M E PN + + +LL C
Sbjct: 478 AVDLIKSMTFE---PNCLIWSTLLSVC 501
>gi|224124454|ref|XP_002330027.1| predicted protein [Populus trichocarpa]
gi|222871452|gb|EEF08583.1| predicted protein [Populus trichocarpa]
Length = 502
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 189/493 (38%), Positives = 280/493 (56%), Gaps = 9/493 (1%)
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS-GVRANQFTYSSALRACARMRWLQG 149
MPER+VV+ TAMISGY A VF M+++ V N FT SS L+AC M +
Sbjct: 1 MPERDVVALTAMISGYTHCNEYTQAWSVFVDMVKNDNVPPNAFTISSVLKACKGMNSVFC 60
Query: 150 GRMIQGSIQKGRFVEN-LFVKSALLDLYAKCG-WIEDAWILFERIERKDVVSWNAMIGGL 207
G ++ G K RFVE ++V +AL+D+YA CG + DA ++F I+ K+VVSW +I G
Sbjct: 61 GGLVHGLAIKRRFVEGFIYVDNALMDMYATCGVTMRDACVVFHDIKEKNVVSWTTLIAGY 120
Query: 208 AMQGFNDDSFWLFRSMMRQG--MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
+G + +FR + +G + P ++ ASVG L + QIH +IK G ES
Sbjct: 121 THRGNGSRAVQVFREISLEGAELNPHSISIAVRACASVGSNILGR--QIHTAVIKHGFES 178
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ S++D+Y + G + A + + M + D+I+ LI+G+ R D S E +F M
Sbjct: 179 DLPVMNSILDMYCRCGCLSEAKEYFNEMSEKDLITWNTLIAGYERSD--SIEPLFIFSQM 236
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ + ++ CAN A+L G+Q+H F+ + + NALIDMYAK G I
Sbjct: 237 ESEGFSPNCFTFTSLVAACANAAALQCGQQVHGGIFRRGLDGNLELANALIDMYAKCGNI 296
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
D+ + F EM N++SWTS++ GY HGYG EA+EL+ +M G+ P+ V F+++L AC
Sbjct: 297 IDSQKNFSEMSCTNLVSWTSMMIGYGTHGYGKEAVELFDEMVRSGIRPDQVVFMAVLHAC 356
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
SH GL +G F M++ Y I P E + CVV L R G++E AY++IR M S+
Sbjct: 357 SHAGLVDQGLRYFNCMLDDYHIKPNQEIYGCVVGLLGRAGRVEEAYHLIRSMPFMADESV 416
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
W A+LGAC + + LG+LAA+ ++P YV+LSNIY A G W A + RKLM+
Sbjct: 417 WGALLGACKAHNLSKLGKLAAKKALALKPNMVETYVMLSNIYAAEGKWGEAERMRKLMKR 476
Query: 566 RSLRKNPGYSFLQ 578
+K G S+++
Sbjct: 477 AGSKKEAGRSWIE 489
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 195/388 (50%), Gaps = 10/388 (2%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGY-ESNLHLSTKVIIFYAKVGDVL-SARKAFD 89
T S+L+ C + L+H I + E +++ ++ YA G + A F
Sbjct: 44 TISSVLKACKGMNSVFCGGLVHGLAIKRRFVEGFIYVDNALMDMYATCGVTMRDACVVFH 103
Query: 90 RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG 149
+ E+NVVSWT +I+GY G A+ VF + G N + S A+RACA +
Sbjct: 104 DIKEKNVVSWTTLIAGYTHRGNGSRAVQVFREISLEGAELNPHSISIAVRACASVGSNIL 163
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
GR I ++ K F +L V +++LD+Y +CG + +A F + KD+++WN +I G
Sbjct: 164 GRQIHTAVIKHGFESDLPVMNSILDMYCRCGCLSEAKEYFNEMSEKDLITWNTLIAGYE- 222
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
+ + + ++F M +G P+CFT S++ A L Q+H I + GL+ + +L
Sbjct: 223 RSDSIEPLFIFSQMESEGFSPNCFTFTSLVAACANAAALQCGQQVHGGIFRRGLDGNLEL 282
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+LID+YAK G+I + + + M T+++S T+++ G+ + KEA +LF +M+
Sbjct: 283 ANALIDMYAKCGNIIDSQKNFSEMSCTNLVSWTSMMIGYG-THGYGKEAVELFDEMVRSG 341
Query: 330 MGIDDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ D V+ +L+ C++ ++ G R + Y + + ++ + ++G + +A
Sbjct: 342 IRPDQVVFMAVLHACSHAGLVDQGLRYFNCMLDDYHIKPNQEIYGCVVGLLGRAGRVEEA 401
Query: 389 N---RAFDEMGDKNVISWTSLIAGYAKH 413
R+ M D++V W +L+ H
Sbjct: 402 YHLIRSMPFMADESV--WGALLGACKAH 427
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 142/267 (53%), Gaps = 2/267 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L+P + ++ C + IH +I +G+ES+L + ++ Y + G + A++
Sbjct: 143 LNPHSISIAVRACASVGSNILGRQIHTAVIKHGFESDLPVMNSILDMYCRCGCLSEAKEY 202
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F+ M E+++++W +I+GY ++ E L +FS M G N FT++S + ACA L
Sbjct: 203 FNEMSEKDLITWNTLIAGYERSDSIE-PLFIFSQMESEGFSPNCFTFTSLVAACANAAAL 261
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
Q G+ + G I + NL + +AL+D+YAKCG I D+ F + ++VSW +M+ G
Sbjct: 262 QCGQQVHGGIFRRGLDGNLELANALIDMYAKCGNIIDSQKNFSEMSCTNLVSWTSMMIGY 321
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESS 266
G+ ++ LF M+R G++PD ++L A S G+ + + ++ ++ +
Sbjct: 322 GTHGYGKEAVELFDEMVRSGIRPDQVVFMAVLHACSHAGLVDQGLRYFNCMLDDYHIKPN 381
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSM 293
++ G ++ + + G + AY L RSM
Sbjct: 382 QEIYGCVVGLLGRAGRVEEAYHLIRSM 408
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 162/446 (36%), Positives = 263/446 (58%), Gaps = 3/446 (0%)
Query: 134 YSSALRACARMRWLQGGRMIQGSIQKGRFVEN-LFVKSALLDLYAKCGWIEDAWILFERI 192
YS L+ C R+ ++ GR++ + F++N L +++ ++++YAKCG ++DA +F+ +
Sbjct: 90 YSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEM 149
Query: 193 ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS 252
KD+V+W A+I G + D+ LF M+R G +P+ FTL S+L+AS L +
Sbjct: 150 PTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGT 209
Query: 253 QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDD 312
Q+H +K G +SS + +L+D+YA+ G + +A + M +S ALISG AR
Sbjct: 210 QLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARK- 268
Query: 313 NHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG 372
+ A L M K +L+ CA++ +L G+ +HA K A +G
Sbjct: 269 GEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIG 328
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
N L+DMYAK+G I DA R FD + +V+SW +++ G A+HG G E ++ +++M G+
Sbjct: 329 NTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIE 388
Query: 433 PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYN 492
PN+++FL +L ACSH+GL EG F +++ KY++ P H+ VDL R G L+ A
Sbjct: 389 PNEISFLCVLTACSHSGLLDEGLYYF-ELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAER 447
Query: 493 MIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGA 552
IR+M I+PTA++W A+LGAC ++ N LG AA F+++P S ++LSNIY +AG
Sbjct: 448 FIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGR 507
Query: 553 WDNARKTRKLMEERSLRKNPGYSFLQ 578
W + K RK+M+E ++K P S+++
Sbjct: 508 WRDVAKVRKMMKESGVKKQPACSWVE 533
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 121/389 (31%), Positives = 206/389 (52%), Gaps = 7/389 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGY-ESNLHLSTKVIIFYAKVGDVLSARKA 87
D + Y LL+ C Q ++HAH++ + + +++L L ++ YAK G + AR+
Sbjct: 86 DYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRM 145
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD MP +++V+WTA+I+G++QN +ALL+F MLR G + N FT SS L+A L
Sbjct: 146 FDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGL 205
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G + K + +++V SAL+D+YA+CG ++ A + F+ + K VSWNA+I G
Sbjct: 206 DPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGH 265
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLES 265
A +G + + L M R+ +P FT S+L AS+G +E K +H +IK GL+
Sbjct: 266 ARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKW--VHAHMIKSGLKL 323
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ +L+D+YAK GSI A +++ ++K D++S +++G A+ KE D F+ M
Sbjct: 324 IAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQ-HGLGKETLDRFEQM 382
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ + +++ +L C++ L+ G KY+ D +D+ + G +
Sbjct: 383 LRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLL 442
Query: 386 ADANRAFDEMG-DKNVISWTSLIAGYAKH 413
A R EM + W +L+ H
Sbjct: 443 DRAERFIREMPIEPTAAVWGALLGACRMH 471
>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Cucumis sativus]
Length = 746
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 190/541 (35%), Positives = 294/541 (54%), Gaps = 12/541 (2%)
Query: 51 LIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
+IH I+ G S + L+ +I Y+K G V AR FD + + VSW ++I+GY QNG
Sbjct: 88 MIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNG 147
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG----GRMIQGSIQKGRFVENL 166
E L + M ++G+ N +T SAL+AC+ G G M+ K ++
Sbjct: 148 KYEELLTILQKMHQNGLAFNTYTLGSALKACSSN--FNGCKMFGTMLHDHAIKLGLHLDV 205
Query: 167 FVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD-----SFWLFR 221
V +ALLD+YAK G ++DA +F+++ K+VV +NAM+ GL Q +D + LF
Sbjct: 206 VVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFF 265
Query: 222 SMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYG 281
M G+KP FT S+L+A + + Q+H L+ K GL S + LID+Y+ G
Sbjct: 266 EMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLG 325
Query: 282 SIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLML 341
S+ A + S+ I+ TA+I G+ ++ + A LF +++ + D+ I ++
Sbjct: 326 SMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEF-ESALSLFYELLTYEEKPDEFIFSTIM 384
Query: 342 NICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVI 401
+ CAN+ L G QI A K S N+ I MYAKSG++ AN F +M + +++
Sbjct: 385 SSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIV 444
Query: 402 SWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM 461
SW+++I A+HG+ EA+ ++ MK G+ PN FL +L ACSH GL EG F M
Sbjct: 445 SWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTM 504
Query: 462 INKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSL 521
Y++ +H CVVDL R G+L A ++I ++ + +W A+L AC I+ +T
Sbjct: 505 EKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSACRIHKDTVT 564
Query: 522 GELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSK 581
+ A+ + ++EP S +YV+L NIY AG A K R LMEER ++K PG S++Q
Sbjct: 565 AQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASKVRTLMEERRIKKEPGLSWIQIGD 624
Query: 582 K 582
K
Sbjct: 625 K 625
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 240/454 (52%), Gaps = 20/454 (4%)
Query: 77 KVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSS 136
K GD SA K FD+M + N+V++ ++ISGY Q + +++F R G++ +++ +
Sbjct: 13 KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAG 72
Query: 137 ALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKD 196
AL AC++ L G+MI G I + + ++L+D+Y+KCG ++ A ILF+ ++ D
Sbjct: 73 ALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLD 132
Query: 197 VVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI--SQI 254
VSWN++I G G ++ + + M + G+ + +TLGS L+A K+ + +
Sbjct: 133 GVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTML 192
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR---- 310
HD IKLGL + +L+D+YAK GS+ A Q++ M+ +++ A+++G +
Sbjct: 193 HDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETI 252
Query: 311 DDNHSKEAFDLFKDMILKKMGIDDVILCL--MLNICANVASLNLGRQIHAFAFKYQSSYD 368
+D + +A +LF +M K GI + +L C V +Q+HA K D
Sbjct: 253 EDKCAYKALNLFFEM--KSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSD 310
Query: 369 AAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKH 428
+G+ LID+Y+ G + DA F+ + + ++ T++I GY ++G A+ L+ ++
Sbjct: 311 EYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLT 370
Query: 429 EGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM----INKYRILPRAEHFSCVVDLFARR 484
P++ F +++ +C++ G+ G ++ I+++ I ++ + ++A+
Sbjct: 371 YEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQ-----IWMYAKS 425
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
G L +A +QM P WS ++ + + +G+
Sbjct: 426 GDLYAANLTFQQME-NPDIVSWSTMICSNAQHGH 458
>gi|224141133|ref|XP_002323929.1| predicted protein [Populus trichocarpa]
gi|222866931|gb|EEF04062.1| predicted protein [Populus trichocarpa]
Length = 770
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 179/569 (31%), Positives = 305/569 (53%), Gaps = 18/569 (3%)
Query: 19 FSLSC----PDTLLDPSTYMSLLQFCIDKKAERQAHLI-----HAHIITNGYESNLHLST 69
FS +C + D TY ++L FC +A+ + H+ I+ G++ + +
Sbjct: 147 FSFACKMNSSGVVFDAVTYTTVLSFCWR---HVEAYFLIGLQLHSCIVKFGFDCEVFVGN 203
Query: 70 KVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG-YDENALLVFSAMLRSGVR 128
+I Y++ G ++ AR+ F+ M R++VSW AMISGY+Q G Y A+ +F M R G+
Sbjct: 204 ALISMYSRWGHLVEARRVFEEMKTRDLVSWNAMISGYSQEGIYGLEAISMFLQMFRGGME 263
Query: 129 ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWIL 188
++ +++SA+ AC + L+ R I G K R +++ V + L+ Y KC IEDA ++
Sbjct: 264 LDRISFTSAVSACGYEKNLELARQIHGLSIKTRHEKHVAVSNVLISTYFKCQVIEDARLV 323
Query: 189 FERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIEL 248
F+ + ++VVSW MI + + F M G+ P+ T ++ A G +
Sbjct: 324 FQNMNERNVVSWTTMISIDEAEAVS-----FFNEMRLDGVYPNDVTFVGLIHAITIGELV 378
Query: 249 MKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGF 308
++ +H K G S + + S+I +YAK+ S++ + ++++ + DII+ ALISGF
Sbjct: 379 VQGKMVHGFCTKTGFSSKSNVCNSIITMYAKFKSMQDSVKVFQELKYQDIIAWNALISGF 438
Query: 309 ARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYD 368
+ + F +I K L A SL G++ H+ K + D
Sbjct: 439 VHNGLCQEAIRAFFSGLIESKPNQYSFGSILNAIGAAEDVSLKYGQRCHSQIIKLGLNTD 498
Query: 369 AAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKH 428
V +AL+DMYAK G I ++ + F E ++ +WT++I+ YA+HG + +++M+
Sbjct: 499 PIVSSALLDMYAKRGSICESQKVFVETPQQSQFAWTTIISAYARHGDYESVMNWFEEMRR 558
Query: 429 EGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLE 488
+ P+ +TFLS+L AC G+ G LF M+ Y+I P AEH+SC+VD+ R G+LE
Sbjct: 559 LEVRPDSITFLSILTACGRRGMVDMGCHLFGSMVKDYQIEPSAEHYSCLVDMLGRAGRLE 618
Query: 489 SAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYT 548
A ++ + P S+ ++LGAC ++GN +GE A L +MEP +S +YV++SN+Y
Sbjct: 619 EAERLMSHIPGGPGLSVLQSLLGACRVHGNVDMGERVADALMEMEPTESGSYVLMSNLYA 678
Query: 549 AAGAWDNARKTRKLMEERSLRKNPGYSFL 577
G W+ K RK M + ++K G+S++
Sbjct: 679 EIGKWEMVAKVRKRMRVKGVKKEVGFSWV 707
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 122/485 (25%), Positives = 225/485 (46%), Gaps = 39/485 (8%)
Query: 77 KVGDVLSARKAFDRMPERNV---VSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFT 133
K G+ A D+ P RN+ + ++SG+ N ++FT
Sbjct: 28 KTGESSHAHNLLDKTPHRNLSFQIIKEHLLSGFINN-------------------IDEFT 68
Query: 134 YSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE 193
++AL+AC L G I G FV V ++L+++Y K G A +FE +
Sbjct: 69 VANALKACRGYPLL--GSQIHGFSIIHEFVNVTIVSNSLMNMYCKSGQFCKALCIFENLT 126
Query: 194 RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIE--LMKI 251
D+VSWN ++ G ++D+F M G+ D T ++L +E +
Sbjct: 127 HPDIVSWNTVLSGCQT---SEDAFSFACKMNSSGVVFDAVTYTTVLSFCWRHVEAYFLIG 183
Query: 252 SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD 311
Q+H I+K G + + +LI +Y+++G + A +++ M D++S A+ISG++++
Sbjct: 184 LQLHSCIVKFGFDCEVFVGNALISMYSRWGHLVEARRVFEEMKTRDLVSWNAMISGYSQE 243
Query: 312 DNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAV 371
+ EA +F M M +D + ++ C +L L RQIH + K + AV
Sbjct: 244 GIYGLEAISMFLQMFRGGMELDRISFTSAVSACGYEKNLELARQIHGLSIKTRHEKHVAV 303
Query: 372 GNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGM 431
N LI Y K I DA F M ++NV+SWT++I+ EA+ + +M+ +G+
Sbjct: 304 SNVLISTYFKCQVIEDARLVFQNMNERNVVSWTTMISIDEA-----EAVSFFNEMRLDGV 358
Query: 432 VPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAY 491
PNDVTF+ L+ A + L +G ++ K ++ + ++ ++A+ ++ +
Sbjct: 359 YPNDVTFVGLIHAITIGELVVQG-KMVHGFCTKTGFSSKSNVCNSIITMYAKFKSMQDSV 417
Query: 492 NMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAG 551
+ +++ + + W+A++ S + + L + A R F E N +I A G
Sbjct: 418 KVFQELKYQDIIA-WNALI---SGFVHNGLCQEAIRAFFSGLIESKPNQYSFGSILNAIG 473
Query: 552 AWDNA 556
A ++
Sbjct: 474 AAEDV 478
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 150/578 (25%), Positives = 257/578 (44%), Gaps = 75/578 (12%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IH I + + + +S ++ Y K G A F+ + ++VSW ++SG +
Sbjct: 86 IHGFSIIHEFVNVTIVSNSLMNMYCKSGQFCKALCIFENLTHPDIVSWNTVLSGCQTS-- 143
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARM--RWLQGGRMIQGSIQKGRFVENLFVK 169
E+A M SGV + TY++ L C R + G + I K F +FV
Sbjct: 144 -EDAFSFACKMNSSGVVFDAVTYTTVLSFCWRHVEAYFLIGLQLHSCIVKFGFDCEVFVG 202
Query: 170 SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG-FNDDSFWLFRSMMRQGM 228
+AL+ +Y++ G + +A +FE ++ +D+VSWNAMI G + +G + ++ +F M R GM
Sbjct: 203 NALISMYSRWGHLVEARRVFEEMKTRDLVSWNAMISGYSQEGIYGLEAISMFLQMFRGGM 262
Query: 229 KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQ 288
+ D + S + A L QIH L IK E ++ LI Y K I A
Sbjct: 263 ELDRISFTSAVSACGYEKNLELARQIHGLSIKTRHEKHVAVSNVLISTYFKCQVIEDARL 322
Query: 289 LYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
++++M + +++S T +IS EA F +M L + +DV +++
Sbjct: 323 VFQNMNERNVVSWTTMIS------IDEAEAVSFFNEMRLDGVYPNDVTFVGLIHAITIGE 376
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA 408
+ G+ +H F K S + V N++I MYAK + D+ + F E+ +++I+W +LI+
Sbjct: 377 LVVQGKMVHGFCTKTGFSSKSNVCNSIITMYAKFKSMQDSVKVFQELKYQDIIAWNALIS 436
Query: 409 GYAKHGYGHEAIELYKKMKHEGMV---PNDVTFLSLLFAC-------------------- 445
G+ +G EAI + G++ PN +F S+L A
Sbjct: 437 GFVHNGLCQEAIRAF----FSGLIESKPNQYSFGSILNAIGAAEDVSLKYGQRCHSQIIK 492
Query: 446 -----------------SHTGLTCEGWELFTDMINKYRILPRAEHF--SCVVDLFARRGQ 486
+ G CE ++F + P+ F + ++ +AR G
Sbjct: 493 LGLNTDPIVSSALLDMYAKRGSICESQKVFVET-------PQQSQFAWTTIISAYARHGD 545
Query: 487 LESAYN---MIRQMNIKPTASLWSAILGACSIYGNTSLG-ELAARNLFDMEPEKSV-NYV 541
ES N +R++ ++P + + +IL AC G +G L + D + E S +Y
Sbjct: 546 YESVMNWFEEMRRLEVRPDSITFLSILTACGRRGMVDMGCHLFGSMVKDYQIEPSAEHYS 605
Query: 542 VLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQS 579
L ++ AG + A +LM + PG S LQS
Sbjct: 606 CLVDMLGRAGRLEEA---ERLMSH--IPGGPGLSVLQS 638
>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
Length = 610
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 157/456 (34%), Positives = 275/456 (60%), Gaps = 5/456 (1%)
Query: 125 SGVRANQF-TYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIE 183
G A +F Y +A+ C R L+ GR + + + L++ + L+ +YA+CG +E
Sbjct: 28 PGAGAARFHDYDAAITECVGRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALE 87
Query: 184 DAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV 243
DA + + + ++VVSW AMI G + +++ LF M+R G +P+ FTL S+L +
Sbjct: 88 DAHNVLDGMPERNVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCT 147
Query: 244 G--GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC 301
G GI +I Q+H IK E + SL+D+YA+ +I+ A +++ + D++S
Sbjct: 148 GSQGIHQHQIKQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSY 207
Query: 302 TALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF 361
T ++SG+ R +EA +LF+ + + M + V ++LN + ++S++ G+Q+H
Sbjct: 208 TTILSGYTRL-GLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLIL 266
Query: 362 KYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIE 421
+ + + A+ N+LIDMY+K G++ + R FD M +++V+SW +++ GY +HG +E ++
Sbjct: 267 RRELPFFMALQNSLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQ 326
Query: 422 LYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLF 481
L++ M + + P+ VT L++L SH GL EG ++F ++ + L +H+ CV+DL
Sbjct: 327 LFRFMC-DKVKPDSVTLLAVLLGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLL 385
Query: 482 ARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYV 541
R GQLE A +I++M +PT ++W ++LGAC ++ N +GE A+ LFD+EPE + NYV
Sbjct: 386 GRSGQLEKALLLIQKMPFQPTRAIWGSLLGACRVHANVHVGEFVAQKLFDIEPENAGNYV 445
Query: 542 VLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
+LSNIY AA W + + RKLM ++++ K PG S++
Sbjct: 446 ILSNIYAAARMWKDVFRLRKLMLKKTVIKEPGRSWM 481
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 206/389 (52%), Gaps = 6/389 (1%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y + + C+ ++A R+ +HA ++T GY L+L+T+++I YA+ G + A D MP
Sbjct: 38 YDAAITECVGRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMP 97
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
ERNVVSWTAMISGY+QN A +F MLR+G N+FT +S L +C + + ++
Sbjct: 98 ERNVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQI 157
Query: 153 --IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ K F ++FV S+LLD+YA+ I++A +F+ + +DVVS+ ++ G
Sbjct: 158 KQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRL 217
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
G ++++ LFR + +GM+ + T +L A G + Q+H LI++ L L
Sbjct: 218 GLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQ 277
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
SLID+Y+K G + + +++ +M + ++S A++ G+ R + E LF+ M K+
Sbjct: 278 NSLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGR-HGMAYEVVQLFRFMC-DKV 335
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS-YDAAVGNALIDMYAKSGEIADAN 389
D V L +L ++ ++ G + K QS+ + +ID+ +SG++ A
Sbjct: 336 KPDSVTLLAVLLGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGRSGQLEKAL 395
Query: 390 RAFDEMGDKNVIS-WTSLIAGYAKHGYGH 417
+M + + W SL+ H H
Sbjct: 396 LLIQKMPFQPTRAIWGSLLGACRVHANVH 424
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 141/268 (52%), Gaps = 10/268 (3%)
Query: 32 TYMSLLQFCIDKKA--ERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFD 89
T S+L C + + Q +HA I +E ++ + + ++ YA+ ++ AR+ FD
Sbjct: 138 TLASVLTSCTGSQGIHQHQIKQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFD 197
Query: 90 RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG 149
+P R+VVS+T ++SGY + G DE AL +F + G++ NQ T+S L A + + +
Sbjct: 198 MLPARDVVSYTTILSGYTRLGLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDY 257
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
G+ + G I + + ++++L+D+Y+KCG + + +F+ + + VVSWNAM+ G
Sbjct: 258 GKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGR 317
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
G + LFR M + +KPD TL ++L G + + + D I+K E S L
Sbjct: 318 HGMAYEVVQLFRFMCDK-VKPDSVTLLAVLLGYSHGGLVDEGLDMFDHIVK---EQSTLL 373
Query: 270 T----GSLIDVYAKYGSIRSAYQLYRSM 293
G +ID+ + G + A L + M
Sbjct: 374 NTQHYGCVIDLLGRSGQLEKALLLIQKM 401
>gi|413933941|gb|AFW68492.1| hypothetical protein ZEAMMB73_143921 [Zea mays]
Length = 564
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 184/541 (34%), Positives = 302/541 (55%), Gaps = 4/541 (0%)
Query: 38 QFCIDKKAERQAHLIHAHII-TNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNV 96
Q C R+ +HA ++ T ++ L+ +I Y+ D +SA + F +P N+
Sbjct: 25 QSCGRTGDIRRGRALHARLLLTGAAAASTFLANHLITMYSHCADAVSAVRVFGVVPRPNL 84
Query: 97 VSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGS 156
VSWT ++SG QN +AL F+AM R+ + QF SSA RA A + + G +
Sbjct: 85 VSWTTLVSGLVQNSMHHDALAAFAAMRRAHIAPTQFALSSAARAAAALSAPRPGTQLHCI 144
Query: 157 IQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDS 216
+ F LFV S L D+Y+KCG + +A +F+++ +KD V+W MI G A G + +
Sbjct: 145 GIRLGFDNELFVASNLADMYSKCGLLHEACRVFDQMPQKDAVTWTTMIDGYAKNGSLEAA 204
Query: 217 FWLFRSMMRQGM-KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLID 275
+FR M +G+ D S L AS G + +H IIK G E + +L+D
Sbjct: 205 ILIFRDMKCEGLVGADQHVFCSALSASGGLKDGWFGRSLHCCIIKAGFELETVVRNALLD 264
Query: 276 VYAKYGSIRSAYQLYR-SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD 334
+YAK G + +A ++ +++S T+LI G+ + +EA + + ++ + + ++
Sbjct: 265 MYAKSGDLENASRVVSIDPGGWNVVSATSLIDGYV-EAGRIEEALETYTELGRQGVEPNE 323
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE 394
M+ CA L G Q+HA K D+ VG+ L+ MY G I+ + + F+E
Sbjct: 324 FTFASMIKGCAMHDLLEQGAQLHAQVLKTNLISDSFVGSTLVYMYGNCGLISLSLQLFNE 383
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG 454
+G + I+W ++I YA+HG+G AI+ + +M G+ PN +TF+ LL ACSH GL EG
Sbjct: 384 IGYRTEIAWNAVINVYAQHGHGWGAIQAFDRMTSSGIRPNHITFVCLLTACSHAGLVDEG 443
Query: 455 WELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACS 514
F M + + I P+AEH+SC++D++ R G+L+ A I +M +KP+A W ++LGAC
Sbjct: 444 LGYFHSMKDAHGIEPKAEHYSCIIDMYGRAGRLDEAEKFISEMPVKPSAYAWCSLLGACR 503
Query: 515 IYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGY 574
+ GN LGE+AA+NL ++P + ++ LS IYT+ G W++ + +K M++ S++K PG+
Sbjct: 504 MQGNKELGEVAAQNLMKLDPNNTGIHISLSGIYTSLGQWEDVKAVKKSMKDISIKKLPGF 563
Query: 575 S 575
S
Sbjct: 564 S 564
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 103/214 (48%), Gaps = 4/214 (1%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITN 59
+++ + G++++AL+ ++P+ T+ S+++ C Q +HA ++
Sbjct: 293 SLIDGYVEAGRIEEALETYTELGRQGVEPNEFTFASMIKGCAMHDLLEQGAQLHAQVLKT 352
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
S+ + + ++ Y G + + + F+ + R ++W A+I+ YAQ+G+ A+ F
Sbjct: 353 NLISDSFVGSTLVYMYGNCGLISLSLQLFNEIGYRTEIAWNAVINVYAQHGHGWGAIQAF 412
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK-SALLDLYAK 178
M SG+R N T+ L AC+ + G S++ +E S ++D+Y +
Sbjct: 413 DRMTSSGIRPNHITFVCLLTACSHAGLVDEGLGYFHSMKDAHGIEPKAEHYSCIIDMYGR 472
Query: 179 CGWIEDAW-ILFERIERKDVVSWNAMIGGLAMQG 211
G +++A + E + +W +++G MQG
Sbjct: 473 AGRLDEAEKFISEMPVKPSAYAWCSLLGACRMQG 506
>gi|328774747|gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
Length = 1073
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 179/570 (31%), Positives = 303/570 (53%), Gaps = 4/570 (0%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITN 59
N + A + G +++A + + P TY SLL C D+ + +H+ I +
Sbjct: 372 NAMIAGYGEGLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIAST 431
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G++++L ++T +I YAK G ARK F++MPERNV+SW A IS ++ + A F
Sbjct: 432 GWQTDLTVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAF 491
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
M R V + T+ + L +C L+ GR I G I + + N V +AL+ +Y +C
Sbjct: 492 KQMRRDDVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALISMYGRC 551
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G + DA +F RI R+D+ SWNAMI G N +F LFR +G K D +T ++L
Sbjct: 552 GNLADAREVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVL 611
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
RA +L IH L+ K G ++ +LI +Y+K GS+R A ++ ++ + D++
Sbjct: 612 RAVANLEDLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVV 671
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
A+++ +A D ++A LF+ M L+ + D LN CA + ++ G++IHA
Sbjct: 672 CWNAMLAAYAHSD-RGQDALKLFQQMQLEGVNPDSSTYSTALNACARLTAVEHGKKIHAQ 730
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
+ D V N+LI+MY++ G + A + F++M +++ SW +LIAGY ++G G+ A
Sbjct: 731 LKEAGMETDTRVSNSLIEMYSRCGCLCSAKQVFEKMLSRDINSWNALIAGYCQNGQGNIA 790
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD 479
+E Y+ M +VPN TF S+L + + G + ++ + ++ + P +H++ +V
Sbjct: 791 LEYYELMLRASIVPNKATFTSILSSYAQLGEEEQAFDFLESIKKEWNMEPSEQHYAYMVA 850
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVN 539
R G L+ A I +++ + A +W ++L AC I+ N L E A +L D + + S
Sbjct: 851 ALGRAGLLKEAEEFIEEISAESAALMWESLLVACRIHLNVELAETAVEHLLDAKAQASPA 910
Query: 540 YV-VLSNIYTAAGAWDNARKTRKLMEERSL 568
L +IY AAG W++ + M+E L
Sbjct: 911 VCEQLMSIYAAAGRWEDVSVLKTTMQEAGL 940
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 150/485 (30%), Positives = 265/485 (54%), Gaps = 4/485 (0%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y LQ C+ K+ + +H H+ + ++ +++L+ +I Y+K G + A F M
Sbjct: 103 YARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDANNVFQAME 162
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
+++VVSW AMISGYA +G D+ A +F M R G++ NQ T+ S L AC L+ G
Sbjct: 163 DKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQSPIALEFGEQ 222
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF 212
I I K + ++ V +AL+++Y KCG +E A +F + ++VVSW AMI G G
Sbjct: 223 IHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGD 282
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS 272
+ ++ LFR ++R G++P+ + SIL A +L + ++H I + GLE + +
Sbjct: 283 SREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNA 342
Query: 273 LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI 332
LI +Y++ GS+ +A Q++ ++ + + A+I+G+ + +EAF LF+ M K
Sbjct: 343 LISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYG--EGLMEEAFRLFRAMEQKGFQP 400
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAF 392
D +L ICA+ A L+ G+++H+ D V ALI MYAK G +A + F
Sbjct: 401 DKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVF 460
Query: 393 DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTC 452
++M ++NVISW + I+ +H G EA + +K+M+ + + P+ +TF++LL +C+ +
Sbjct: 461 NQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCT-SPEDL 519
Query: 453 EGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
E IN++ +L + ++ ++ R G L A + ++ + S W+A++ A
Sbjct: 520 ERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGS-WNAMIAA 578
Query: 513 CSIYG 517
+G
Sbjct: 579 NVQHG 583
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 158/507 (31%), Positives = 268/507 (52%), Gaps = 7/507 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
+ +T++S+L C A IH+ I GYES++++ST +I Y K G + ARK F
Sbjct: 200 NQNTFISILSACQSPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVF 259
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ M ERNVVSWTAMISGY Q+G AL +F ++RSG++ N+ +++S L AC L
Sbjct: 260 NEMRERNVVSWTAMISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLG 319
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G + I++ + + V +AL+ +Y++CG + +A +F+ + + +WNAMI G
Sbjct: 320 EGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYG 379
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
+G +++F LFR+M ++G +PD FT S+L +L + ++H I G ++
Sbjct: 380 -EGLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLT 438
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +LI +YAK GS A +++ M + ++IS A IS R D KEAF FK M
Sbjct: 439 VATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHD-LGKEAFQAFKQMRRD 497
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ D + +LN C + L GR IH ++ + V NALI MY + G +ADA
Sbjct: 498 DVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADA 557
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
F + +++ SW ++IA +HG A +L++K + EG + TF+++L A ++
Sbjct: 558 REVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANL 617
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
+ + ++ K + ++ ++++ G L A N+ + K W+A
Sbjct: 618 E-DLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVV-CWNA 675
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPE 535
+L A Y ++ G+ A + M+ E
Sbjct: 676 MLAA---YAHSDRGQDALKLFQQMQLE 699
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/447 (30%), Positives = 233/447 (52%), Gaps = 29/447 (6%)
Query: 124 RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIE 183
+ GV+AN Y+ L+ C + L G+ + ++ +F ++++ + L+ +Y+KCG IE
Sbjct: 93 KRGVQANLNFYARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIE 152
Query: 184 DAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV 243
DA +F+ +E KDVVSWNAMI G A+ G + ++ LF M R+G+KP+ T SIL A
Sbjct: 153 DANNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQ 212
Query: 244 GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTA 303
I L QIH I K G ES ++ +LI++Y K GS+ A +++ M + +++S TA
Sbjct: 213 SPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTA 272
Query: 304 LISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY 363
+ISG+ + + S+EA LF+ +I + + V +L C N L G ++HA+ +
Sbjct: 273 MISGYVQHGD-SREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQA 331
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELY 423
+ VGNALI MY++ G +A+A + FD + N +W ++IAGY + G EA L+
Sbjct: 332 GLEQEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGE-GLMEEAFRLF 390
Query: 424 KKMKHEGMVPNDVTFLSLLFACS-----------HTGLTCEGWELFTDMINKYRILPRAE 472
+ M+ +G P+ T+ SLL C+ H+ + GW+ TD+
Sbjct: 391 RAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQ--TDLTVA-------- 440
Query: 473 HFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIY--GNTSLGELAARNLF 530
+ ++ ++A+ G E A + QM + S W+A + C + G +
Sbjct: 441 --TALISMYAKCGSPEEARKVFNQMPERNVIS-WNAFISCCCRHDLGKEAFQAFKQMRRD 497
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNAR 557
D+ P+ + ++ L N T+ + R
Sbjct: 498 DVNPDH-ITFITLLNSCTSPEDLERGR 523
>gi|255559826|ref|XP_002520932.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539898|gb|EEF41477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 757
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 188/556 (33%), Positives = 310/556 (55%), Gaps = 7/556 (1%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
ST + L+Q C +A+++ +H ++I +G ++ + + YA V D+ AR FD
Sbjct: 166 STLVLLVQACRSLRAKQEGLQLHGYLIQSGLWASWSVQNSFLCMYADV-DMDCARILFDE 224
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLR-SGVRANQFTYSSALRACARMRWLQG 149
MPE++V+SW+AMI GY Q D+ L +F ML S + + S L+ACA +
Sbjct: 225 MPEKDVISWSAMIGGYVQYLEDQIGLQIFQKMLSTSRITPDGVILVSVLKACANSVNITM 284
Query: 150 GRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
GR++ G +I +G +LFVK++L+D+Y+KC A+ +F + R++ VSWN+++ GL
Sbjct: 285 GRLVHGLTICRG-LDSDLFVKNSLIDMYSKCKDAGSAFEVFSEMPRRNNVSWNSLLSGLI 343
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
+ ++ L SM +G++ D TL + L+ +H I+ G ES+
Sbjct: 344 LNKKYSEALLLVYSMRTEGIEADEVTLVNCLQICKYFAHPYHCKAVHCATIRRGCESNEI 403
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ SLID YAK I A++++ + D++ + +I+GFA EA +F+ M
Sbjct: 404 VLNSLIDAYAKCNLIELAWEVFSRTRRRDVVLWSTMIAGFAHCGK-PDEAIAVFQKMNEG 462
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ V + +L C+ A L H A + + + AVG A++DMY+K GEI +
Sbjct: 463 IEVPNAVTIINLLQACSVSAELKRSMWAHGAAIRRGLAAEVAVGTAIVDMYSKCGEIEAS 522
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+AF+++ KN+I+W+++IA Y +G HEA+ L +MK + PN +T+LS+L ACSH
Sbjct: 523 RKAFNQIPQKNIITWSTMIAAYGMNGLAHEALALLAQMKSHEIKPNALTYLSVLTACSHG 582
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM--NIKPTASLW 506
GL G +F MI + + P EH+SC+VD+ +R G+L+ A +IR M + AS+W
Sbjct: 583 GLVEMGLSVFKSMIQDHGVDPEFEHYSCMVDMLSRAGKLDDAMELIRMMPETFRAGASVW 642
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
A+L AC Y +++LGE A + ++EP Y++ S++Y + G WDNA + + L ER
Sbjct: 643 GALLSACRTYRSSTLGEKAVYQVLELEPLNLAGYLLASSMYASDGLWDNAARMKLLARER 702
Query: 567 SLRKNPGYSFLQSSKK 582
+R GYS + K
Sbjct: 703 GVRAVAGYSIVHVDSK 718
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 163/587 (27%), Positives = 272/587 (46%), Gaps = 63/587 (10%)
Query: 27 LLDPSTYMSLLQFC-----IDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDV 81
LLD + + +L+ C ID K +HA +I ++S + ++ FY K G++
Sbjct: 62 LLDVTLFPPVLKACSYLSYIDGKC------LHACLIKTAFDSFTSIGNSILNFYIKCGEL 115
Query: 82 LSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC 141
+A FD M R+ VSW +I G G L F +G N T ++AC
Sbjct: 116 DTAVSVFDSMRSRDSVSWNVLIHGCLDYGALVEGLWQFINARVAGFEPNISTLVLLVQAC 175
Query: 142 ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN 201
+R Q G + G + + + V+++ L +YA ++ A ILF+ + KDV+SW+
Sbjct: 176 RSLRAKQEGLQLHGYLIQSGLWASWSVQNSFLCMYADVD-MDCARILFDEMPEKDVISWS 234
Query: 202 AMIGGLAMQGFNDDSFWLFRSMMRQG-MKPDCFTLGSILRASVGGIELMKISQIHDLIIK 260
AMIGG + +F+ M+ + PD L S+L+A + + +H L I
Sbjct: 235 AMIGGYVQYLEDQIGLQIFQKMLSTSRITPDGVILVSVLKACANSVNITMGRLVHGLTIC 294
Query: 261 LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFD 320
GL+S + SLID+Y+K SA++++ M + + +S +L+SG + +S EA
Sbjct: 295 RGLDSDLFVKNSLIDMYSKCKDAGSAFEVFSEMPRRNNVSWNSLLSGLILNKKYS-EALL 353
Query: 321 LFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYA 380
L M + + D+V L L IC A + +H + + V N+LID YA
Sbjct: 354 LVYSMRTEGIEADEVTLVNCLQICKYFAHPYHCKAVHCATIRRGCESNEIVLNSLIDAYA 413
Query: 381 KSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
K I A F ++V+ W+++IAG+A G EAI +++KM VPN VT ++
Sbjct: 414 KCNLIELAWEVFSRTRRRDVVLWSTMIAGFAHCGKPDEAIAVFQKMNEGIEVPNAVTIIN 473
Query: 441 LLFACSHTGLTCEGWELFTDMINKYRILPR---AEHF--SCVVDLFARRGQLES---AYN 492
LL ACS + EL M + R AE + +VD++++ G++E+ A+N
Sbjct: 474 LLQACSVSA------ELKRSMWAHGAAIRRGLAAEVAVGTAIVDMYSKCGEIEASRKAFN 527
Query: 493 MIRQMN-------------------------------IKPTASLWSAILGACSIYGNTSL 521
I Q N IKP A + ++L ACS G +
Sbjct: 528 QIPQKNIITWSTMIAAYGMNGLAHEALALLAQMKSHEIKPNALTYLSVLTACSHGGLVEM 587
Query: 522 GELAARNLFD---MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
G +++ ++PE +Y + ++ + AG D+A + ++M E
Sbjct: 588 GLSVFKSMIQDHGVDPEFE-HYSCMVDMLSRAGKLDDAMELIRMMPE 633
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 177/557 (31%), Positives = 305/557 (54%), Gaps = 7/557 (1%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHII-TNGYESNLHLSTKVIIFYAKVGDVLS 83
D +P Y ++L C +A + IH+ I T G + ++ L ++ YAK G +
Sbjct: 116 DLQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLED 175
Query: 84 ARKAFDRMP-ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA 142
A++ F+RM R+V SW AMI+ YAQ+G+ E A+ ++ M V + T++S L AC+
Sbjct: 176 AKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACS 232
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
+ L GR I I +L +++ALL +YA+C ++DA +F+R+ R+DVVSW+A
Sbjct: 233 NLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSA 292
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
MI A D++ + M +G++P+ +T S+L A +L +HD I+ G
Sbjct: 293 MIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNG 352
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
+ + +L+D+Y YGS+ A L+ + D T LI G+++ H +L+
Sbjct: 353 YKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQ-GHRTGVLELY 411
Query: 323 KDMI-LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
++M K+ +I +++ CA++ + RQ H+ D + +L++MY++
Sbjct: 412 REMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSR 471
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
G + A + FD+M ++ ++WT+LIAGYAKHG A+ LYK+M+ EG P+++TF+ +
Sbjct: 472 WGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVV 531
Query: 442 LFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
L+ACSH GL +G +LF + + Y + P H+SC++DL +R G+L A +I M ++P
Sbjct: 532 LYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEP 591
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRK 561
WS++LGA I+ + AA + ++P +YV+LSN++ G R
Sbjct: 592 NDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRN 651
Query: 562 LMEERSLRKNPGYSFLQ 578
M R ++K G S+++
Sbjct: 652 TMVARGVKKRRGSSWIE 668
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 153/521 (29%), Positives = 267/521 (51%), Gaps = 28/521 (5%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y L+ C D ++ RQ H I+ +N+ L +++ Y K G V SAR AFD +
Sbjct: 30 YRDALRQCQDLESVRQIH----DRISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIA 85
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
+N SW +M++ YAQNG+ AL ++ M ++ N Y++ L ACA + L+ G+
Sbjct: 86 RKNDYSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIEALEEGKA 142
Query: 153 IQGSIQKGRFVE-NLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGGLAMQ 210
I I + ++ ++ ++++LL +YAKCG +EDA LFER+ R+ V SWNAMI A
Sbjct: 143 IHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQS 202
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
G +++ L+ M ++P T S+L A L + +IH LI G E L
Sbjct: 203 GHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQ 259
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
+L+ +YA+ + A ++++ + + D++S +A+I+ FA D EA + + M L+ +
Sbjct: 260 NALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFD-EAIEFYSKMQLEGV 318
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
+ +L CA+V L GR +H G AL+D+Y G + +A
Sbjct: 319 RPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARS 378
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP-NDVTFLSLLFACSHTG 449
FD++ +++ WT LI GY+K G+ +ELY++MK+ VP + + ++ AC+ G
Sbjct: 379 LFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLG 438
Query: 450 LTCEGWELFTD-----MINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
+ + +D MI+ + + + +V++++R G LESA + +M+ + T +
Sbjct: 439 AFADARQAHSDIEADGMISDFVLA------TSLVNMYSRWGNLESARQVFDKMSSRDTLA 492
Query: 505 LWSAILGACSIYGN--TSLGELAARNLFDMEPEKSVNYVVL 543
W+ ++ + +G +LG L EP + VVL
Sbjct: 493 -WTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVL 532
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 112/227 (49%), Gaps = 11/227 (4%)
Query: 341 LNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNV 400
L C ++ S+ RQIH +S + +GN ++ Y K G +A A AFD + KN
Sbjct: 34 LRQCQDLESV---RQIHD-RISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKND 89
Query: 401 ISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTD 460
SW S++ YA++G+ A++LYK+M + PN V + ++L AC+ EG + +
Sbjct: 90 YSWGSMLTAYAQNGHYRAALDLYKRMD---LQPNPVVYTTVLGACASIEALEEGKAIHSR 146
Query: 461 MINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTS 520
+ + + ++ ++A+ G LE A + +M+ + + S W+A++ A Y +
Sbjct: 147 ISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAA---YAQSG 203
Query: 521 LGELAARNLFDMEPEKSV-NYVVLSNIYTAAGAWDNARKTRKLMEER 566
E A R DM+ E SV + + + + G D RK L+ R
Sbjct: 204 HFEEAIRLYEDMDVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSR 250
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 175/534 (32%), Positives = 295/534 (55%), Gaps = 7/534 (1%)
Query: 48 QAHLIHAHIITNGYESNLHLSTKVIIFYA--KVGDVLSARKAFDRMPERNVVSWTAMISG 105
Q IHA ++ G + ++K++ F + + G + AR F ++P + ++I G
Sbjct: 3 QLKQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRG 62
Query: 106 YAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVEN 165
+ ALL + M+ G+ +++T+ S ++C R G+ I K F +
Sbjct: 63 CTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSC---RNSSEGKQIHCHSTKLGFASD 119
Query: 166 LFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR 225
+ ++ L+++Y+ CG + A +F+++E K VVSW MIG A +++ LF MM+
Sbjct: 120 TYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMK 179
Query: 226 -QGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIR 284
+ +KP+ TL ++L A +L + +IH+ I + G L L+DVY K G ++
Sbjct: 180 SENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQ 239
Query: 285 SAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNIC 344
A L+ + ++ S +I+G D N+ +EA LF++M K + D V + +L C
Sbjct: 240 LARDLFDKAQEKNLFSWNIMINGHVEDSNY-EEALLLFREMQTKGIKGDKVTMASLLLAC 298
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWT 404
++ +L LG+ +HA+ K + D A+G AL+DMYAK G I A + F EM +K+V++WT
Sbjct: 299 THLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWT 358
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK 464
+LI G A G A++ + +M +G+ P+ +TF+ +L ACSH G EG F M +
Sbjct: 359 ALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDT 418
Query: 465 YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGEL 524
Y I P EH+ +VD+ R G++ A +I+ M + P + +LGAC I+GN E
Sbjct: 419 YGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAER 478
Query: 525 AARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
AA+ L +++P S YV+LSNIY ++ W+ A++TR+LM ER +RK PG S ++
Sbjct: 479 AAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIE 532
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 145/263 (55%), Gaps = 1/263 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T +++L C + IH +I +G+ ++ L+T ++ Y K G V AR FD+
Sbjct: 189 TLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKA 248
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
E+N+ SW MI+G+ ++ E ALL+F M G++ ++ T +S L AC + L+ G+
Sbjct: 249 QEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGK 308
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ I+K R ++ + +AL+D+YAKCG IE A +F + KDV++W A+I GLAM G
Sbjct: 309 WLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCG 368
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLT 270
+++ F M +G+KPD T +L A S G IS + + G++ + +
Sbjct: 369 QAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHY 428
Query: 271 GSLIDVYAKYGSIRSAYQLYRSM 293
G L+D+ + G I A +L +SM
Sbjct: 429 GGLVDILGRAGRIAEAEELIKSM 451
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 63/122 (51%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T SLL C A +HA+I + ++ L T ++ YAK G + +A + F
Sbjct: 287 DKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVF 346
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
MPE++V++WTA+I G A G ENAL F M GV+ + T+ L AC+ ++
Sbjct: 347 HEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVD 406
Query: 149 GG 150
G
Sbjct: 407 EG 408
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 172/548 (31%), Positives = 289/548 (52%), Gaps = 35/548 (6%)
Query: 66 HLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML-R 124
HL+ K I Y+ GD+ AR FD++P+ ++ +WT +IS ++G A+ ++ +
Sbjct: 12 HLALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHK 71
Query: 125 SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIED 184
+ V ++ S +ACA +R + + + + F ++ + +AL+D+Y KC E
Sbjct: 72 NCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEG 131
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG 244
A ++FE + +DV+SW +M G ++ FR M G +P+ T+ SIL A
Sbjct: 132 ARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTD 191
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
+L ++H +++ G+ + ++ +L+++YA SIR A ++ SM + D +S L
Sbjct: 192 LKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVL 251
Query: 305 ISG-------------FAR---------------------DDNHSKEAFDLFKDMILKKM 330
I+ F R + +++A ++ M
Sbjct: 252 ITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGF 311
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
+ + + +L C N+ SL G+QIH + F++ D AL+ MYAK G++ + R
Sbjct: 312 KPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRR 371
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
F M ++ +SW ++I + HG G EA+ L+++M G+ PN VTF +L CSH+ L
Sbjct: 372 VFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRL 431
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
EG +F M + + P A+H SC+VD+ +R G+LE AY I++M I+PTA W A+L
Sbjct: 432 VDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALL 491
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
G C +Y N LG +AA LF++E + NYV+LSNI +A W A +TRKLM +R + K
Sbjct: 492 GGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTK 551
Query: 571 NPGYSFLQ 578
NPG S++Q
Sbjct: 552 NPGCSWIQ 559
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 190/423 (44%), Gaps = 42/423 (9%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS 83
PD LL +S+ + C + A +H I G+ S++ L +I Y K
Sbjct: 76 PDKLL----LLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEG 131
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
AR F+ MP R+V+SWT+M S Y G AL F M +G R N T SS L AC
Sbjct: 132 ARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTD 191
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS---- 199
++ L+ GR + G + + N+FV SAL+++YA C I A ++F+ + R+D VS
Sbjct: 192 LKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVL 251
Query: 200 -------------------------------WNAMIGGLAMQGFNDDSFWLFRSMMRQGM 228
WNA+IGG G + + + M G
Sbjct: 252 ITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGF 311
Query: 229 KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQ 288
KP+ T+ S+L A L QIH I + T +L+ +YAK G + + +
Sbjct: 312 KPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRR 371
Query: 289 LYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
++ M K D +S +I + N +EA LF++M+ + + V +L+ C++
Sbjct: 372 VFSMMTKRDTVSWNTMIIATSMHGN-GEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSR 430
Query: 349 SLNLGRQI-HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSL 406
++ G I + + + DA + ++D+ +++G + +A +M + +W +L
Sbjct: 431 LVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGAL 490
Query: 407 IAG 409
+ G
Sbjct: 491 LGG 493
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 111/208 (53%), Gaps = 4/208 (1%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNG 60
++ + G+ ++AL+ ++ P+ T S+L C + ++ R IH +I +
Sbjct: 286 VIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHW 345
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+ +L +T ++ YAK GD+ +R+ F M +R+ VSW MI + +G E ALL+F
Sbjct: 346 FFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFR 405
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVE-NLFVKSALLDLYAKC 179
M+ SGVR N T++ L C+ R + G +I S+ + VE + S ++D+ ++
Sbjct: 406 EMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRA 465
Query: 180 GWIEDAWILFERIERKDVV-SWNAMIGG 206
G +E+A+ +++ + +W A++GG
Sbjct: 466 GRLEEAYEFIKKMPIEPTAGAWGALLGG 493
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 2/191 (1%)
Query: 257 LIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSK 316
++ KL L I VY+ G ++ A L+ + + D+ + T LIS + S
Sbjct: 1 MLSKLPTSLPPHLALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTK-HGRSL 59
Query: 317 EAFDLFKDMILKK-MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNAL 375
EA + D K + D ++L + CA++ + +++H A ++ D +GNAL
Sbjct: 60 EAIQYYNDFRHKNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNAL 119
Query: 376 IDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND 435
IDMY K A F+ M ++VISWTS+ + Y G EA+ ++KM G PN
Sbjct: 120 IDMYGKCRCSEGARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNS 179
Query: 436 VTFLSLLFACS 446
VT S+L AC+
Sbjct: 180 VTVSSILPACT 190
>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1221
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 178/574 (31%), Positives = 318/574 (55%), Gaps = 12/574 (2%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ G+ + AL ++ + P+ + + L C D A R +H+ + G+ +
Sbjct: 18 RNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAW 77
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ + +I Y++ G + +A++ FDRM +VV +T++IS + +NG E A ML+ G
Sbjct: 78 IGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQG 137
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQK--GRFVENLFVKSALLDLYAKCGWIED 184
++ N+ T ++ L AC R+ G+ I G + K G ++++ +AL+D Y++ G +
Sbjct: 138 LKPNEHTMTTILTACPRVL----GQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKL 193
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG 244
A +F+ + K+VVSW +M+ G +++ +F M+ +G+ P+ F L SI+ + G
Sbjct: 194 AKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFAL-SIVLGACG 252
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
I L + Q+H IK L + +++ +L+ +Y + G + + + D++S T
Sbjct: 253 SIGLGR--QLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTA 310
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
IS ++ ++A L M + + +L+ CA+VASL+ G Q H A K
Sbjct: 311 ISANFQN-GFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLG 369
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
+ GNALI+MY+K G++ A AFD M +V SW SLI G+A+HG ++A+E++
Sbjct: 370 CDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFS 429
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
KM+ G+ P+D TFL +L C+H+G+ EG F MI++Y P H++C++D+ R
Sbjct: 430 KMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRN 489
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLS 544
G+ + A MI M +P A +W +L +C ++ N +G+LAA L ++ S +YV++S
Sbjct: 490 GRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMS 549
Query: 545 NIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
NIY G W++ARK R+ M+E ++K+ G S+++
Sbjct: 550 NIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIE 583
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 140/505 (27%), Positives = 254/505 (50%), Gaps = 49/505 (9%)
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
MP +NVV+WT+++SGY +NG E AL +F+ M+ SGV N F ++AL ACA + L+ G
Sbjct: 1 MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAG 60
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ + F + ++ S L+++Y++CG + A +F+R++ DVV + ++I
Sbjct: 61 EQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRN 120
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHD-LIIKLGLESSNKL 269
G + + M++QG+KP+ T+ +IL A + QIH LI K+GL S +
Sbjct: 121 GEFELAAEALIQMLKQGLKPNEHTMTTILTA----CPRVLGQQIHGYLIKKIGLRSQSVY 176
Query: 270 TGS-LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ + LID Y++ G + A ++ S+ +++S +++ + R D +EA +F DMI +
Sbjct: 177 SSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIR-DGRLEEALQVFGDMISE 235
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ ++ L ++L C S+ LGRQ+H A K+ D V NAL+ MY ++G + +
Sbjct: 236 GVDPNEFALSIVLGAC---GSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEEL 292
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+++ + +++SWT+ I+ ++G+G +AI L +M EG PN F S+L +C+
Sbjct: 293 EAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADV 352
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA------------------ 490
+G + F + K + +++++++ GQ+ SA
Sbjct: 353 ASLDQGMQ-FHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSL 411
Query: 491 ----------------YNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD--- 531
++ +R IKP S + +L C+ G GEL R + D
Sbjct: 412 IHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYS 471
Query: 532 MEPEKSVNYVVLSNIYTAAGAWDNA 556
P S +Y + ++ G +D A
Sbjct: 472 FTPAPS-HYACMIDMLGRNGRFDEA 495
>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
Length = 795
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 165/552 (29%), Positives = 310/552 (56%), Gaps = 4/552 (0%)
Query: 29 DPSTYMS-LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
D T+ S LL++ ++ + +H+HI+ GYE + + V+ Y K GDV A
Sbjct: 115 DRITFTSILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNV 174
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD + + NV SWT +I+ YAQNG+ L + S M ++GV+ + +T+++ L AC + L
Sbjct: 175 FDSIQDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGAL 234
Query: 148 QGGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
+ +++ +I + V +AL++LY KCG +E+A+ +F +I+ KD+VSW++MI
Sbjct: 235 EEAKILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAA 294
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
A G + L M +G++P+ T ++L A +IH I++ G
Sbjct: 295 FAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDD 354
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
LT +L+ +Y +G + +A ++ S + D++S +++I+G++++++ ++ A LF++M
Sbjct: 355 VCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPAR-ALSLFREME 413
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ + + V ++ CA V +L G Q+H D V AL+++Y K G +
Sbjct: 414 VDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLE 473
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
+A F M KN+++WTS+ Y ++G+G +++L M+ +GM P+ + F+++L +C+
Sbjct: 474 EAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCN 533
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
+ G +G + M + I P EH C+VD+ R G+LE+A +I M + + + W
Sbjct: 534 YAGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSLA-W 592
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
+L AC + +T+ AA +F +EP+ + YV+LS+++ AAG+W+ A +TR+ M+ R
Sbjct: 593 MMLLTACKAHNDTARAARAAEKIFQLEPKNATPYVLLSSVFCAAGSWEAAEETRRRMDGR 652
Query: 567 SLRKNPGYSFLQ 578
+++ G S ++
Sbjct: 653 GVQRLLGRSSIE 664
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 149/526 (28%), Positives = 272/526 (51%), Gaps = 20/526 (3%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH-----LSTKVIIFYAKVGDVLSAR 85
S ++L C D +A + +H ++ + L VI Y + G A
Sbjct: 11 SACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLAL 70
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSAL-RACARM 144
FDRM ++NVV+WT++IS + G+ +A+++F ML SGV ++ T++S L + R
Sbjct: 71 DVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRE 130
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
R L G+ + I + + + V + ++++Y KCG +E A +F+ I+ +V SW +I
Sbjct: 131 RNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIII 190
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA--SVGGIELMKISQIHDLII-KL 261
A G + L M + G+KPD +T ++L A +VG +E KI +H I
Sbjct: 191 AAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKI--LHAATISST 248
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDL 321
GL+ + +LI++Y K G++ A+ ++ + DI+S +++I+ FA+ +K A L
Sbjct: 249 GLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQ-SGQAKSAIQL 307
Query: 322 FKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
M L+ + ++V +L ++ + G++IHA + S D + +AL+ MY
Sbjct: 308 LMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCN 367
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
G + A F+ +++V+SW+S+IAGY+++ A+ L+++M+ +G+ PN VTF+S
Sbjct: 368 WGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSA 427
Query: 442 LFACSHTGLTCEGWELFTDM--INKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
+ AC+ G G +L + + + +P A + +V+L+ + G+LE A + M
Sbjct: 428 IDACAGVGALRRGTQLHERVRCLGLDKDVPVA---TALVNLYGKCGRLEEAEAVFLGMKK 484
Query: 500 KPTASLWSAILGACSI--YGNTSLGELAARNLFDMEPEKSVNYVVL 543
K + W++I A +G+ SL L L M+P+ V +L
Sbjct: 485 KNLLT-WTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAIL 529
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 147/303 (48%), Gaps = 10/303 (3%)
Query: 253 QIHDLIIKLGLESSNKLTGSL-----IDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG 307
++H L+++ L + SL I +Y + G A ++ M ++++ T+LIS
Sbjct: 31 RVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVFDRMKDQNVVAWTSLISA 90
Query: 308 FARDDNHSKEAFDLFKDMILKKMGIDDVILC-LMLNICANVASLNLGRQIHAFAFKYQSS 366
F H +A LF+ M+L + D + ++L +L+ G+++H+ +
Sbjct: 91 FTFA-GHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNLDEGKRVHSHIMQTGYE 149
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
D V N +++MY K G++ A FD + D NV SWT +IA YA++G+ E + L +M
Sbjct: 150 GDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAYAQNGHCMEVLRLLSRM 209
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
G+ P+ TF ++L AC+ G E L I+ + A + +++L+ + G
Sbjct: 210 NQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRDAAVGTALINLYGKCGA 269
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
LE A+ + Q++ K S WS+++ A + G + L D+E + N V N+
Sbjct: 270 LEEAFGVFVQIDNKDIVS-WSSMIAAFAQSGQAK-SAIQLLMLMDLEGVRP-NNVTFVNV 326
Query: 547 YTA 549
A
Sbjct: 327 LEA 329
>gi|147799187|emb|CAN74829.1| hypothetical protein VITISV_002140 [Vitis vinifera]
Length = 542
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 172/493 (34%), Positives = 277/493 (56%), Gaps = 2/493 (0%)
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV-RANQFTYSSALRACARMRWLQG 149
MP ++ +SW + ISG NG E VF + SG+ + +Q T ++ L AC + +
Sbjct: 1 MPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQFDQATLTTVLTACDKPEFCYV 60
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
+MI + + + V +AL+ Y +CG +F+ + K+VV+W A+I GL+
Sbjct: 61 SKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEKNVVTWTAVISGLSQ 120
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
F ++S LF M + P+ T S L A G + + QIH L+ KLG+ +
Sbjct: 121 GQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQIHGLVWKLGVHFDLCI 180
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+L+D+Y+K GS+ A++++ S + D +S T ++ G A++ +E+ +F M+
Sbjct: 181 ESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGLAQN-GFEEESIQVFVKMVKNG 239
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ ID ++ +L + SL LG+QIH+ K + V N LI+MY+K G++ D+
Sbjct: 240 VVIDPNMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNYFVNNGLINMYSKCGDLDDSI 299
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
+ F M +N +SW S+IA +A+HG G A++LY++M+ EG+ P DVTFLSLL AC+H G
Sbjct: 300 KIFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRLEGVWPTDVTFLSLLHACAHVG 359
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
L +G M Y I PR EH++CVVD+ R G L A I ++ KP +W A+
Sbjct: 360 LVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGILVWQAL 419
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
LGACSI+GN+ +G+ AA LF PE Y++L+NIY++ G W +T K M++ +
Sbjct: 420 LGACSIHGNSEMGKYAANQLFLQAPESPAPYILLANIYSSEGKWKERARTIKKMKDMGVT 479
Query: 570 KNPGYSFLQSSKK 582
K G S+++ K+
Sbjct: 480 KETGISWIEIEKQ 492
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/396 (31%), Positives = 213/396 (53%), Gaps = 17/396 (4%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
D +T ++L C + + +IH+ + GYE + + +I Y + G S R+
Sbjct: 40 FDQATLTTVLTACDKPEFCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRV 99
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD M E+NVV+WTA+ISG +Q + E +L +F M V N TY S+L AC+ ++ +
Sbjct: 100 FDEMSEKNVVTWTAVISGLSQGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAI 159
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ GR I G + K +L ++SAL+D+Y+KCG +EDAW +FE E D VS ++ GL
Sbjct: 160 REGRQIHGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGL 219
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIE--LMKISQIHDLIIKLGLES 265
A GF ++S +F M++ G+ D + +IL V GI+ L QIH LIIK S
Sbjct: 220 AQNGFEEESIQVFVKMVKNGVVIDPNMISAIL--GVFGIDTSLALGKQIHSLIIKKSFGS 277
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ + LI++Y+K G + + +++ M + + +S ++I+ FAR N S+ A L+++M
Sbjct: 278 NYFVNNGLINMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGSR-ALQLYEEM 336
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN------ALIDMY 379
L+ + DV +L+ CA+V + G F + D +G ++DM
Sbjct: 337 RLEGVWPTDVTFLSLLHACAHVGLVEKG-----MGFLESMAKDYGIGPRMEHYACVVDMM 391
Query: 380 AKSGEIADANRAFDEMGDK-NVISWTSLIAGYAKHG 414
++G + +A + + + +K ++ W +L+ + HG
Sbjct: 392 GRAGLLNEAKKFIERLPEKPGILVWQALLGACSIHG 427
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 161/446 (36%), Positives = 263/446 (58%), Gaps = 3/446 (0%)
Query: 134 YSSALRACARMRWLQGGRMIQGSIQKGRFVEN-LFVKSALLDLYAKCGWIEDAWILFERI 192
YS L+ C R+ ++ GR++ + F++N L +++ ++++YAKCG ++DA +F+ +
Sbjct: 90 YSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEM 149
Query: 193 ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS 252
KD+V+W A+I G + D+ LF M+R G++P+ FTL S+L+AS L +
Sbjct: 150 PTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGT 209
Query: 253 QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDD 312
Q+H +K G +SS + +L+D+YA+ G + +A + M +S ALISG AR
Sbjct: 210 QLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARK- 268
Query: 313 NHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG 372
+ A L M K + + CA++ +L G+ +HA K A +G
Sbjct: 269 GEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIG 328
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
N L+DMYAK+G I DA R FD + +V+SW +++ G A+HG G E ++ +++M G+
Sbjct: 329 NTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIE 388
Query: 433 PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYN 492
PN+++FL +L ACSH+GL EG F +++ KY++ P H+ VDL R G L+ A
Sbjct: 389 PNEISFLCVLTACSHSGLLDEGLYYF-ELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAER 447
Query: 493 MIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGA 552
IR+M I+PTA++W A+LGAC ++ N LG AA F+++P S ++LSNIY +AG
Sbjct: 448 FIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGR 507
Query: 553 WDNARKTRKLMEERSLRKNPGYSFLQ 578
W + K RK+M+E ++K P S+++
Sbjct: 508 WRDVAKVRKMMKESGVKKQPACSWVE 533
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 120/389 (30%), Positives = 206/389 (52%), Gaps = 7/389 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGY-ESNLHLSTKVIIFYAKVGDVLSARKA 87
D + Y LL+ C Q ++HAH++ + + +++L L ++ YAK G + AR+
Sbjct: 86 DYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRM 145
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD MP +++V+WTA+I+G++QN +ALL+F MLR G++ N FT SS L+A L
Sbjct: 146 FDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGL 205
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G + K + +++V SAL+D+YA+CG ++ A + F+ + K VSWNA+I G
Sbjct: 206 DPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGH 265
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLES 265
A +G + + L M R+ +P FT S+ AS+G +E K +H +IK GL+
Sbjct: 266 ARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGK--WVHAHMIKSGLKL 323
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ +L+D+YAK GSI A +++ ++K D++S +++G A+ KE D F+ M
Sbjct: 324 IAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQ-HGLGKETLDRFEQM 382
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ + +++ +L C++ L+ G KY+ D +D+ + G +
Sbjct: 383 LRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLL 442
Query: 386 ADANRAFDEMG-DKNVISWTSLIAGYAKH 413
A R EM + W +L+ H
Sbjct: 443 DRAERFIREMPIEPTAAVWGALLGACRMH 471
>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
Length = 1135
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 178/574 (31%), Positives = 318/574 (55%), Gaps = 12/574 (2%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ G+ + AL ++ + P+ + + L C D A R +H+ + G+ +
Sbjct: 91 RNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAW 150
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ + +I Y++ G + +A++ FDRM +VV +T++IS + +NG E A ML+ G
Sbjct: 151 IGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQG 210
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQK--GRFVENLFVKSALLDLYAKCGWIED 184
++ N+ T ++ L AC R+ G+ I G + K G ++++ +AL+D Y++ G +
Sbjct: 211 LKPNEHTMTTILTACPRVL----GQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKL 266
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG 244
A +F+ + K+VVSW +M+ G +++ +F M+ +G+ P+ F L SI+ + G
Sbjct: 267 AKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFAL-SIVLGACG 325
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
I L + Q+H IK L + +++ +L+ +Y + G + + + D++S T
Sbjct: 326 SIGLGR--QLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTA 383
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
IS ++ ++A L M + + +L+ CA+VASL+ G Q H A K
Sbjct: 384 ISANFQN-GFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLG 442
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
+ GNALI+MY+K G++ A AFD M +V SW SLI G+A+HG ++A+E++
Sbjct: 443 CDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFS 502
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
KM+ G+ P+D TFL +L C+H+G+ EG F MI++Y P H++C++D+ R
Sbjct: 503 KMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRN 562
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLS 544
G+ + A MI M +P A +W +L +C ++ N +G+LAA L ++ S +YV++S
Sbjct: 563 GRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMS 622
Query: 545 NIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
NIY G W++ARK R+ M+E ++K+ G S+++
Sbjct: 623 NIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIE 656
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 148/529 (27%), Positives = 264/529 (49%), Gaps = 49/529 (9%)
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
L K + K G + A FDRMP +NVV+WT+++SGY +NG E AL +F+ M+ SG
Sbjct: 50 LECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESG 109
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
V N F ++AL ACA + L+ G + + F + ++ S L+++Y++CG + A
Sbjct: 110 VAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAK 169
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+F+R++ DVV + ++I G + + M++QG+KP+ T+ +IL A +
Sbjct: 170 EVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVL 229
Query: 247 ELMKISQIHD-LIIKLGLESSNKLTGS-LIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
QIH LI K+GL S + + + LID Y++ G + A ++ S+ +++S ++
Sbjct: 230 G----QQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSM 285
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
+ + R D +EA +F DMI + + ++ L ++L C S+ LGRQ+H A K+
Sbjct: 286 MQLYIR-DGRLEEALQVFGDMISEGVDPNEFALSIVLGAC---GSIGLGRQLHCSAIKHD 341
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
D V NAL+ MY ++G + + +++ + +++SWT+ I+ ++G+G +AI L
Sbjct: 342 LITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLC 401
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
+M EG PN F S+L +C+ +G + F + K + +++++++
Sbjct: 402 QMHSEGFTPNGYAFSSVLSSCADVASLDQGMQ-FHCLALKLGCDSEICTGNALINMYSKC 460
Query: 485 GQLESA----------------------------------YNMIRQMNIKPTASLWSAIL 510
GQ+ SA ++ +R IKP S + +L
Sbjct: 461 GQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVL 520
Query: 511 GACSIYGNTSLGELAARNLFD---MEPEKSVNYVVLSNIYTAAGAWDNA 556
C+ G GEL R + D P S +Y + ++ G +D A
Sbjct: 521 MGCNHSGMVEEGELFFRLMIDQYSFTPAPS-HYACMIDMLGRNGRFDEA 568
>gi|449450760|ref|XP_004143130.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Cucumis sativus]
gi|449496662|ref|XP_004160192.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Cucumis sativus]
Length = 547
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 185/553 (33%), Positives = 297/553 (53%), Gaps = 41/553 (7%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y+ L++ C + +HA +I +G H + K I FYA G + AR FD++P
Sbjct: 31 YIELIETCGRNRDLNFGRSLHARLIIDGSARLTHFAAKFIAFYAACGKIKDARILFDKIP 90
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
N W +I Y++ GY AL VF + R G+R +++ S L+AC + GR
Sbjct: 91 RTNPRRWIVLIGAYSRCGYYPEALSVFCELQRGGLRPSEYIIPSVLKACGHLSEKTTGRK 150
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF 212
+ I K + +V SAL+D+YAK G +E A +FE + KD+V+ NAM+ G A G
Sbjct: 151 LHTLILKNSLESDAYVCSALIDMYAKSGEVEKARRVFESMAGKDLVALNAMVSGYAHHGL 210
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS 272
+++ L M G+KP+ T +
Sbjct: 211 AEEALNLVEEMQVLGIKPNLVTWNT----------------------------------- 235
Query: 273 LIDVYAKYGSIRSAYQLYRSM----LKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
L+ +++ G +L++ M ++ D++S T++ISGF ++ ++EAFD F+ M+
Sbjct: 236 LVTGFSQIGEEEMVRELFKEMEANGIEPDVVSWTSVISGFVQN-FRNEEAFDTFRRMLNA 294
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ +L CA+V + G++IH + D V AL+DMYAK G +A
Sbjct: 295 GFHPTSATISSLLPACASVGNGRCGKEIHGHSLALGVEKDVYVRTALVDMYAKCGYFYEA 354
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND-VTFLSLLFACSH 447
F M ++N +W S+I GYA HGY +EAIEL+ +MK + D +TF ++L AC+H
Sbjct: 355 KILFWRMSERNSATWNSMIFGYANHGYCNEAIELFHQMKDDDEKKLDHLTFTAILTACAH 414
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
GL G LF M +KY I+PR EH++C+VD+F R G+L AY++I+ M +KP +W
Sbjct: 415 AGLVDLGRSLFQLMQSKYGIVPRVEHYACMVDVFGRAGKLAEAYDLIKTMPVKPDLYVWG 474
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
A+LGAC +G L E AA++L ++EP N ++LS+IY AG+W + K +K+M++R
Sbjct: 475 ALLGACRKHGEIELAEEAAKHLSELEPGSVGNSLLLSDIYANAGSWGHVVKLKKMMKKRK 534
Query: 568 LRKNPGYSFLQSS 580
++K PG S+++++
Sbjct: 535 MKKFPGCSWIETA 547
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 90/184 (48%), Gaps = 3/184 (1%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
+T SLL C R IH H + G E ++++ T ++ YAK G A+ F R
Sbjct: 301 ATISSLLPACASVGNGRCGKEIHGHSLALGVEKDVYVRTALVDMYAKCGYFYEAKILFWR 360
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA-NQFTYSSALRACARMRWLQG 149
M ERN +W +MI GYA +GY A+ +F M + + T+++ L ACA +
Sbjct: 361 MSERNSATWNSMIFGYANHGYCNEAIELFHQMKDDDEKKLDHLTFTAILTACAHAGLVDL 420
Query: 150 GR-MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERK-DVVSWNAMIGGL 207
GR + Q K V + + ++D++ + G + +A+ L + + K D+ W A++G
Sbjct: 421 GRSLFQLMQSKYGIVPRVEHYACMVDVFGRAGKLAEAYDLIKTMPVKPDLYVWGALLGAC 480
Query: 208 AMQG 211
G
Sbjct: 481 RKHG 484
>gi|225438593|ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial [Vitis vinifera]
gi|296082485|emb|CBI21490.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 189/560 (33%), Positives = 305/560 (54%), Gaps = 5/560 (0%)
Query: 28 LDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
L+P+ T+ S+ + C + + ++H H++ + ++++L + T V+ Y K + A
Sbjct: 50 LEPNNLTFPSVAKACSKLLNLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAY 109
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
F RMP+R+V SW +MI G+AQ G+ + + +F M G+RA+ T + ++
Sbjct: 110 NLFSRMPKRDVASWNSMILGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLK 169
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER--KDVVSWNAM 203
L+ I K ++ V + + YAKCG A +F+ I++ K VSWN+M
Sbjct: 170 DLKMLESIHSFGIKIGIDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTGVSWNSM 229
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGL 263
I G A + F+ M+ G + D T+ S+L + V L IH I++G
Sbjct: 230 IAGYAHFEQCSKAVGFFKKMLCGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGC 289
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
+S ++ +LI +Y+K G I SA L+ +ML +S TA+I+G+A + EA LF
Sbjct: 290 DSDIQVINTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGYAEKGDLD-EAMTLFS 348
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
M D V + +++ C +L LG+ I +A + V NALID+YAK G
Sbjct: 349 AMEAVGEKPDLVTIISLMSGCGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAKCG 408
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
+ +A F M +K+++SWT+LIAG A +G EA+ L+ +M G+ PN +TFL++L
Sbjct: 409 SMDNARELFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQ 468
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
AC+H G +GWE F M Y+I P +H+SC+ DL R+G+L+ A+ I+ M KP
Sbjct: 469 ACNHAGFLEKGWECFNLMTKVYKINPGLDHYSCMADLLGRKGRLKEAFEFIQNMPFKPDV 528
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
+WS +L AC I+ N +GE A +LF++EP+ +V YV ++NIY +AG WD R +M
Sbjct: 529 GIWSVLLSACKIHQNVVIGECVAYHLFELEPQTAVPYVQMANIYASAGKWDRVAAIRTMM 588
Query: 564 EERSLRKNPGYSFLQSSKKN 583
+ K+PG S +Q + K
Sbjct: 589 KCNKAMKSPGKSLVQVNGKT 608
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 147/502 (29%), Positives = 251/502 (50%), Gaps = 22/502 (4%)
Query: 83 SARKAFDRMPER-NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC 141
+A ++F+R V W + I+ GY ALL+F M ++G+ N T+ S +AC
Sbjct: 5 AATQSFNRFSNLWTVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKAC 64
Query: 142 ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN 201
+++ L+ +++ + K RF +LFV+++++D+Y KC + A+ LF R+ ++DV SWN
Sbjct: 65 SKLLNLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWN 124
Query: 202 AMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKL 261
+MI G A GF D LF M +G++ D T+ + +++ +L + IH IK+
Sbjct: 125 SMILGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKI 184
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM---LKTDIISCTALISGFARDDNHSKEA 318
G+++ ++ + I YAK G A ++ + LKT +S ++I+G+A + SK A
Sbjct: 185 GIDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTG-VSWNSMIAGYAHFEQCSK-A 242
Query: 319 FDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDM 378
FK M+ D + +L+ C L G+ IHA + D V N LI M
Sbjct: 243 VGFFKKMLCGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISM 302
Query: 379 YAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTF 438
Y+K G+I A FD M K +SWT++IAGYA+ G EA+ L+ M+ G P+ VT
Sbjct: 303 YSKCGDIGSARYLFDNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEKPDLVTI 362
Query: 439 LSLLFACSHTG-LTCEGWELFTDMINKYRILP--RAEHFSC--VVDLFARRGQLESAYNM 493
+SL+ C TG L W I+ Y + C ++D++A+ G +++A +
Sbjct: 363 ISLMSGCGQTGALELGKW------IDTYATANGLKDNLMVCNALIDVYAKCGSMDNAREL 416
Query: 494 IRQMNIKPTASLWSAILGACSIYGN--TSLGELAARNLFDMEPEKSVNYVVLSNIYTAAG 551
M K S W+ ++ C++ G +LG ++P + ++ + AG
Sbjct: 417 FYTMPEKSLVS-WTTLIAGCALNGEFKEALGLFFQMVELGLKPNH-ITFLAVLQACNHAG 474
Query: 552 AWDNARKTRKLMEERSLRKNPG 573
+ + LM + + NPG
Sbjct: 475 FLEKGWECFNLM-TKVYKINPG 495
>gi|255565124|ref|XP_002523554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537116|gb|EEF38749.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 611
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 188/559 (33%), Positives = 286/559 (51%), Gaps = 44/559 (7%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
D L D + +L+ C IH +I G ESNL + +I Y K G+ SA
Sbjct: 91 DVLPDNYVFPKVLRACTQLLWFEGGIWIHKDVIVCGCESNLQVCNSLIDMYVKCGNARSA 150
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
R F+ M ER++ SW +MISGY NG + A+ + + M G + T+++
Sbjct: 151 RLVFEEMEERDLFSWNSMISGYVSNGLADLAVELLNCMRLDGFEPDVVTWNT-------- 202
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
L+D Y + G ++AW + ++IE+ +++SW +I
Sbjct: 203 ---------------------------LMDAYCQMGRFDEAWEVLKQIEQPNIISWTTLI 235
Query: 205 GGLAMQGFNDDSFWLFRSMM-RQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGL 263
+ G +D S +F+ M+ R+ + PD L S+L + L +IH K+
Sbjct: 236 SSYSKIGEHDMSLRVFQDMIIREVVSPDLDCLCSVLVSCRHIGALRSGKEIHGYGTKMET 295
Query: 264 ESS--NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDL 321
+ + +L+ +YAK G I+ A ++ M K+DI++ A+I GF D K+A +
Sbjct: 296 NTVFYSSAGAALLTMYAKCGRIQDAINVFELMDKSDIVTWNAMILGFVELD-LGKQAIEC 354
Query: 322 FKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS-SYDAAVGNALIDMYA 380
F++M + D + +L +C L G IHA+ K + S V NA+I MY
Sbjct: 355 FREMQRMDIKNDQTTISTILPVC----DLQYGNPIHAYVRKSITLSSVVTVWNAVIHMYC 410
Query: 381 KSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
K G + A F M +K+V+SW ++I G+ HG+G A++L K+M G+ PN TF S
Sbjct: 411 KCGCVRSAYTIFCSMPNKDVVSWNTMIGGFGMHGHGQAALKLLKEMILSGIFPNSTTFTS 470
Query: 441 LLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIK 500
+L ACSH+GL EG+ LF M Y I PR EH+SC+VD+ AR GQ A I +M ++
Sbjct: 471 VLSACSHSGLVDEGFRLFRSMTEDYSITPRMEHYSCIVDMLARAGQFADAVTFIHKMPLE 530
Query: 501 PTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTR 560
P S+W A+L AC Y N G LAA L MEP+ + +YV LSNIY AG WD+A + R
Sbjct: 531 PDKSIWGALLAACRAYQNLDFGRLAAEQLIRMEPKCAGHYVTLSNIYARAGRWDDAGRVR 590
Query: 561 KLMEERSLRKNPGYSFLQS 579
K +E + L K G S +++
Sbjct: 591 KEIEGKGLVKPSGQSLIET 609
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 139/538 (25%), Positives = 256/538 (47%), Gaps = 46/538 (8%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
+LQ C + K+ IH I +G+ + + TK+I YA + SA++ FD+MP+ N
Sbjct: 1 MLQLCSNLKSLHAGKQIHQQITVSGWGKDPFMLTKLIQMYADCDHLFSAQRLFDKMPQPN 60
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG 155
V +WTA+ Y ++G + + + M S V + + + LRAC ++ W +GG I
Sbjct: 61 VYAWTAIFGFYLRHGMYDKCVQNYGFMKYSDVLPDNYVFPKVLRACTQLLWFEGGIWIHK 120
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD 215
+ NL V ++L+D+Y KCG A ++FE +E +D+ SWN+MI G G D
Sbjct: 121 DVIVCGCESNLQVCNSLIDMYVKCGNARSARLVFEEMEERDLFSWNSMISGYVSNGLADL 180
Query: 216 SFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLID 275
+ L M G +PD T +L+D
Sbjct: 181 AVELLNCMRLDGFEPDVVTW-----------------------------------NTLMD 205
Query: 276 VYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDV 335
Y + G A+++ + + + +IIS T LIS +++ H + +F+DMI++++ D+
Sbjct: 206 AYCQMGRFDEAWEVLKQIEQPNIISWTTLISSYSKIGEHDM-SLRVFQDMIIREVVSPDL 264
Query: 336 -ILCLMLNICANVASLNLGRQIHAFAFKYQSS--YDAAVGNALIDMYAKSGEIADANRAF 392
LC +L C ++ +L G++IH + K +++ + ++ G AL+ MYAK G I DA F
Sbjct: 265 DCLCSVLVSCRHIGALRSGKEIHGYGTKMETNTVFYSSAGAALLTMYAKCGRIQDAINVF 324
Query: 393 DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTC 452
+ M ++++W ++I G+ + G +AIE +++M+ + + T ++L C
Sbjct: 325 ELMDKSDIVTWNAMILGFVELDLGKQAIECFREMQRMDIKNDQTTISTILPVCDLQ---- 380
Query: 453 EGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
G + + + ++ V+ ++ + G + SAY + M K S W+ ++G
Sbjct: 381 YGNPIHAYVRKSITLSSVVTVWNAVIHMYCKCGCVRSAYTIFCSMPNKDVVS-WNTMIGG 439
Query: 513 CSIYGN--TSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
++G+ +L L L + P + VLS + + R R + E+ S+
Sbjct: 440 FGMHGHGQAALKLLKEMILSGIFPNSTTFTSVLSACSHSGLVDEGFRLFRSMTEDYSI 497
>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
Length = 1027
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 179/565 (31%), Positives = 306/565 (54%), Gaps = 10/565 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T++S+L C + +H I N + +L ++ + Y+K G + A+ F
Sbjct: 425 DEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALF 484
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+P ++ +SW A+ G AQN +E A+ + M G+ + ++S+A+ AC+ +R +
Sbjct: 485 SLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATE 544
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ I K N V S+L+DLY+K G +E + +F +++ +V NA+I G
Sbjct: 545 TGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFV 604
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
D++ LF+ +++ G+KP T SIL G + Q+H +K G+ +
Sbjct: 605 QNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDT 664
Query: 269 LTG-SLIDVYAKYGSIRSAYQLYRSML-KTDIISCTALISGFARDD--NHSKEAFDLFKD 324
L G SL +Y K + A +L M ++ TA+ISG+A++ +HS +F +
Sbjct: 665 LLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRH 724
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ-SSYDAAVGNALIDMYAKSG 383
++ D+ +L C++V + G++IH K SY+ A +ALIDMY+K G
Sbjct: 725 CNVRS---DEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETAT-SALIDMYSKCG 780
Query: 384 EIADANRAFDEMGDK-NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
++ + AF E+ +K +++ W S+I G+AK+GY EA+ L++KM+ + P++VTFL +L
Sbjct: 781 DVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVL 840
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
AC+H+GL EG F M Y + PR +H++C +DL R G L+ A I Q+ +P
Sbjct: 841 IACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPD 900
Query: 503 ASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKL 562
+W+ L AC ++ + G++AAR L ++EP+ S YV+LS+++ A G W A+ TR+
Sbjct: 901 GVVWATYLAACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRES 960
Query: 563 MEERSLRKNPGYSFLQSSKKNILLL 587
M E+ + K PG S++ K L L
Sbjct: 961 MREKGVAKFPGCSWITVGNKTSLFL 985
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 146/482 (30%), Positives = 261/482 (54%), Gaps = 4/482 (0%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
ST+ S+L + KA + +HA + +G ++N+ + + +I YAK G A+ FD
Sbjct: 326 STFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDL 385
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
E+N+V W AM++G+ QN E A+ +F M+R ++ ++FT+ S L AC + G
Sbjct: 386 SCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLG 445
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ + K +LFV +A LD+Y+K G I DA LF I KD +SWNA+ GLA
Sbjct: 446 KQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQN 505
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
+++ + + M G+ PD + + + A QIH L IK G+ S++ +
Sbjct: 506 LEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVG 565
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
SLID+Y+K+G + S+ +++ + + I+ ALI+GF +++N EA LF+ ++ +
Sbjct: 566 SSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNED-EAIQLFQQVLKDGL 624
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSY-DAAVGNALIDMYAKSGEIADAN 389
V +L+ C+ + +G+Q+H + K Y D +G +L +Y KS + DAN
Sbjct: 625 KPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDAN 684
Query: 390 RAFDEMGD-KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ EM D KN+ WT++I+GYA++GYG ++ + +M+H + ++ TF S+L ACS
Sbjct: 685 KLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDV 744
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
+G E+ +I K S ++D++++ G + S++ +++ K W++
Sbjct: 745 TAFADGKEIH-GLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNS 803
Query: 509 IL 510
++
Sbjct: 804 MI 805
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 148/518 (28%), Positives = 266/518 (51%), Gaps = 11/518 (2%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K G + A + ++CPDT+ + S++ ++A + + + G +
Sbjct: 205 KCGDVPNARRVFDGIACPDTI----CWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQV 260
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+I A G + A +MP + V+W A+ISG+AQ+G + N L ++ M G
Sbjct: 261 TLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWG 320
Query: 127 VRANQFTYSSALRACARMR-WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
+ + T++S L A A M+ +++G +M ++ G N+FV S+L++LYAKCG DA
Sbjct: 321 LWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHG-LDANVFVGSSLINLYAKCGCPSDA 379
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGG 245
+F+ K++V WNAM+ G +++ +F+ MMR ++ D FT SIL A
Sbjct: 380 KNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYL 439
Query: 246 IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALI 305
Q+H + IK ++ S + + +D+Y+KYG+I A L+ + D IS AL
Sbjct: 440 SSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALT 499
Query: 306 SGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS 365
G A++ +EA + K M L + DDV +N C+N+ + G+QIH A KY
Sbjct: 500 VGLAQNLEE-EEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGI 558
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKK 425
+ AVG++LID+Y+K G++ + + F ++ +++ +LIAG+ ++ EAI+L+++
Sbjct: 559 CSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQ 618
Query: 426 MKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRG 485
+ +G+ P+ VTF S+L CS + + G ++ + + + ++ +
Sbjct: 619 VLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSK 678
Query: 486 QLESAYNMIRQMNIKPTASLWSAILG--ACSIYGNTSL 521
LE A ++ +M W+AI+ A + YG+ SL
Sbjct: 679 MLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSL 716
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 154/626 (24%), Positives = 268/626 (42%), Gaps = 114/626 (18%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H I+ G L ++ Y K G V A A ER + ++++S +A++G
Sbjct: 78 LHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGS 137
Query: 112 DENALLVFSAM-LRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
+ L F + +G R +QF + L AC+R+ L GR + + K F ++F ++
Sbjct: 138 PGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEA 197
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
AL+D+YAKCG + +A +F+ I D + W++MI G ++ LF M + G P
Sbjct: 198 ALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAP 257
Query: 231 DCFTLGSILR--ASVGGIE----LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIR 284
D TL +I+ AS G ++ L+K + + S + +G +V Y +R
Sbjct: 258 DQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMR 317
Query: 285 S-----AYQLYRSMLK------------------------TDIISCTALISGFAR--DDN 313
S + SML ++ ++LI+ +A+ +
Sbjct: 318 SWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPS 377
Query: 314 HSKEAFDL----------------------------FKDMILKKMGIDDVILCLMLNICA 345
+K FDL F+ M+ + D+ +L C
Sbjct: 378 DAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACT 437
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
++S LG+Q+H K V NA +DMY+K G I DA F + K+ ISW +
Sbjct: 438 YLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNA 497
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
L G A++ EA+ + K+M+ G+ P+DV+F + + ACS+ T G ++ I KY
Sbjct: 498 LTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAI-KY 556
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMN--------------------------- 498
I S ++DL+++ G +ES+ + Q++
Sbjct: 557 GICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLF 616
Query: 499 -------IKPTASLWSAILGACSIYGNTSLGE------LAARNLFDMEPEKSVNYVVLSN 545
+KP++ +S+IL CS N+++G+ L + L+D ++ V L+
Sbjct: 617 QQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYD----DTLLGVSLAG 672
Query: 546 IYTAAGAWDNARKTRKLMEERSLRKN 571
IY + ++A KL+ E KN
Sbjct: 673 IYLKSKMLEDA---NKLLTEMPDHKN 695
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 157/369 (42%), Gaps = 39/369 (10%)
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
R R Q R + G I +G + +L++LY K G + AW + + ++
Sbjct: 68 RARHSQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASS 127
Query: 203 MIGGLAMQGFNDDSFWLFRSM-MRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKL 261
++ A G D FR + G +PD F L +L A L Q+H ++K
Sbjct: 128 LLSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKS 187
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDL 321
G SS +L+D+YAK G + +A +++ + D I +++I+ + R + +EA L
Sbjct: 188 GFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCY-QEALAL 246
Query: 322 FKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
F M KMG S+ D +I A
Sbjct: 247 FSRM--DKMG---------------------------------SAPDQVTLVTIISTLAS 271
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
SG + A +M + ++W ++I+G+A+ G + LYK M+ G+ P TF S+
Sbjct: 272 SGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASM 331
Query: 442 LFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
L A ++ EG ++ + + + S +++L+A+ G A N+ ++ +
Sbjct: 332 LSAAANMKAFVEGQQMHAAAV-MHGLDANVFVGSSLINLYAKCGCPSDAKNVF-DLSCEK 389
Query: 502 TASLWSAIL 510
+W+A+L
Sbjct: 390 NIVMWNAML 398
>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
Length = 1027
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 179/565 (31%), Positives = 306/565 (54%), Gaps = 10/565 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T++S+L C + +H I N + +L ++ + Y+K G + A+ F
Sbjct: 425 DEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALF 484
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+P ++ +SW A+ G AQN +E A+ + M G+ + ++S+A+ AC+ +R +
Sbjct: 485 SLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATE 544
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ I K N V S+L+DLY+K G +E + +F +++ +V NA+I G
Sbjct: 545 TGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFV 604
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
D++ LF+ +++ G+KP T SIL G + Q+H +K G+ +
Sbjct: 605 QNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDT 664
Query: 269 LTG-SLIDVYAKYGSIRSAYQLYRSML-KTDIISCTALISGFARDD--NHSKEAFDLFKD 324
L G SL +Y K + A +L M ++ TA+ISG+A++ +HS +F +
Sbjct: 665 LLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRH 724
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ-SSYDAAVGNALIDMYAKSG 383
++ D+ +L C++V + G++IH K SY+ A +ALIDMY+K G
Sbjct: 725 CNVRS---DEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETAT-SALIDMYSKCG 780
Query: 384 EIADANRAFDEMGDK-NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
++ + AF E+ +K +++ W S+I G+AK+GY EA+ L++KM+ + P++VTFL +L
Sbjct: 781 DVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVL 840
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
AC+H+GL EG F M Y + PR +H++C +DL R G L+ A I Q+ +P
Sbjct: 841 IACTHSGLISEGRHFFGPMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPD 900
Query: 503 ASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKL 562
+W+ L AC ++ + G++AAR L ++EP+ S YV+LS+++ A G W A+ TR+
Sbjct: 901 GVVWATYLAACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRES 960
Query: 563 MEERSLRKNPGYSFLQSSKKNILLL 587
M E+ + K PG S++ K L L
Sbjct: 961 MREKGVAKFPGCSWITVGNKTSLFL 985
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 146/482 (30%), Positives = 261/482 (54%), Gaps = 4/482 (0%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
ST+ S+L + KA + +HA + +G ++N+ + + +I YAK G A+ FD
Sbjct: 326 STFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDL 385
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
E+N+V W AM++G+ QN E A+ +F M+R ++ ++FT+ S L AC + G
Sbjct: 386 SCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLG 445
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ + K +LFV +A LD+Y+K G I DA LF I KD +SWNA+ GLA
Sbjct: 446 KQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQN 505
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
+++ + + M G+ PD + + + A QIH L IK G+ S++ +
Sbjct: 506 LEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVG 565
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
SLID+Y+K+G + S+ +++ + + I+ ALI+GF +++N EA LF+ ++ +
Sbjct: 566 SSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNED-EAIQLFQQVLKDGL 624
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSY-DAAVGNALIDMYAKSGEIADAN 389
V +L+ C+ + +G+Q+H + K Y D +G +L +Y KS + DAN
Sbjct: 625 KPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDAN 684
Query: 390 RAFDEMGD-KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ EM D KN+ WT++I+GYA++GYG ++ + +M+H + ++ TF S+L ACS
Sbjct: 685 KLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDV 744
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
+G E+ +I K S ++D++++ G + S++ +++ K W++
Sbjct: 745 TAFADGKEIH-GLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNS 803
Query: 509 IL 510
++
Sbjct: 804 MI 805
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 148/518 (28%), Positives = 266/518 (51%), Gaps = 11/518 (2%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K G + A + ++CPDT+ + S++ ++A + + + G +
Sbjct: 205 KCGDVPNARRVFDGIACPDTI----CWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQV 260
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+I A G + A +MP + V+W A+ISG+AQ+G + N L ++ M G
Sbjct: 261 TLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWG 320
Query: 127 VRANQFTYSSALRACARMR-WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
+ + T++S L A A M+ +++G +M ++ G N+FV S+L++LYAKCG DA
Sbjct: 321 LWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHG-LDANVFVGSSLINLYAKCGCPSDA 379
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGG 245
+F+ K++V WNAM+ G +++ +F+ MMR ++ D FT SIL A
Sbjct: 380 KNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYL 439
Query: 246 IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALI 305
Q+H + IK ++ S + + +D+Y+KYG+I A L+ + D IS AL
Sbjct: 440 SSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALT 499
Query: 306 SGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS 365
G A+ + +EA + K M L + DDV +N C+N+ + G+QIH A KY
Sbjct: 500 VGLAQ-NLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGI 558
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKK 425
+ AVG++LID+Y+K G++ + + F ++ +++ +LIAG+ ++ EAI+L+++
Sbjct: 559 CSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQ 618
Query: 426 MKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRG 485
+ +G+ P+ VTF S+L CS + + G ++ + + + ++ +
Sbjct: 619 VLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSK 678
Query: 486 QLESAYNMIRQMNIKPTASLWSAILG--ACSIYGNTSL 521
LE A ++ +M W+AI+ A + YG+ SL
Sbjct: 679 MLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSL 716
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 154/626 (24%), Positives = 268/626 (42%), Gaps = 114/626 (18%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H I+ G L ++ Y K G V A A ER + ++++S +A++G
Sbjct: 78 LHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGS 137
Query: 112 DENALLVFSAM-LRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
+ L F + +G R +QF + L AC+R+ L GR + + K F ++F ++
Sbjct: 138 PGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEA 197
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
AL+D+YAKCG + +A +F+ I D + W++MI G ++ LF M + G P
Sbjct: 198 ALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAP 257
Query: 231 DCFTLGSILR--ASVGGIE----LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIR 284
D TL +I+ AS G ++ L+K + + S + +G +V Y +R
Sbjct: 258 DQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMR 317
Query: 285 S-----AYQLYRSMLK------------------------TDIISCTALISGFAR--DDN 313
S + SML ++ ++LI+ +A+ +
Sbjct: 318 SWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPS 377
Query: 314 HSKEAFDL----------------------------FKDMILKKMGIDDVILCLMLNICA 345
+K FDL F+ M+ + D+ +L C
Sbjct: 378 DAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACT 437
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
++S LG+Q+H K V NA +DMY+K G I DA F + K+ ISW +
Sbjct: 438 YLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNA 497
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
L G A++ EA+ + K+M+ G+ P+DV+F + + ACS+ T G ++ I KY
Sbjct: 498 LTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAI-KY 556
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMN--------------------------- 498
I S ++DL+++ G +ES+ + Q++
Sbjct: 557 GICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLF 616
Query: 499 -------IKPTASLWSAILGACSIYGNTSLGE------LAARNLFDMEPEKSVNYVVLSN 545
+KP++ +S+IL CS N+++G+ L + L+D ++ V L+
Sbjct: 617 QQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYD----DTLLGVSLAG 672
Query: 546 IYTAAGAWDNARKTRKLMEERSLRKN 571
IY + ++A KL+ E KN
Sbjct: 673 IYLKSKMLEDA---NKLLTEMPDHKN 695
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 157/369 (42%), Gaps = 39/369 (10%)
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
R R Q R + G I +G + +L++LY K G + AW + + ++
Sbjct: 68 RARHSQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASS 127
Query: 203 MIGGLAMQGFNDDSFWLFRSM-MRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKL 261
++ A G D FR + G +PD F L +L A L Q+H ++K
Sbjct: 128 LLSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKS 187
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDL 321
G SS +L+D+YAK G + +A +++ + D I +++I+ + R + +EA L
Sbjct: 188 GFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCY-QEALAL 246
Query: 322 FKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
F M KMG S+ D +I A
Sbjct: 247 FSRM--DKMG---------------------------------SAPDQVTLVTIISTLAS 271
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
SG + A +M + ++W ++I+G+A+ G + LYK M+ G+ P TF S+
Sbjct: 272 SGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASM 331
Query: 442 LFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
L A ++ EG ++ + + + S +++L+A+ G A N+ ++ +
Sbjct: 332 LSAAANMKAFVEGQQMHAAAV-MHGLDANVFVGSSLINLYAKCGCPSDAKNVF-DLSCEK 389
Query: 502 TASLWSAIL 510
+W+A+L
Sbjct: 390 NIVMWNAML 398
>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
Length = 803
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 186/582 (31%), Positives = 295/582 (50%), Gaps = 52/582 (8%)
Query: 9 KTGQLKQALK-FSLSCPDTL-LDPSTYMSLLQFCIDK--------KAERQAHLIHAHIIT 58
+TG + AL+ F+ C + +DP + S+L C +A R IHA ++
Sbjct: 219 QTGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVR 278
Query: 59 NGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLV 118
G+ S+ H+ +I Y K ++ A K F+ +P +VSW +I+G+ Q G A+ V
Sbjct: 279 KGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEV 338
Query: 119 FSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
S M +G N+ TYS+ L +C + R + R
Sbjct: 339 LSLMQEAGFEPNEVTYSNLLASCIKARDVHSARA-------------------------- 372
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
+F++I R V +WN ++ G + + D+ LFR M Q ++PD TL I
Sbjct: 373 ---------MFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVI 423
Query: 239 LRASVGGIELMKIS-QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
L +S + ++ Q+H ++ L + + L+D+Y+K G I A ++ M + D
Sbjct: 424 L-SSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERD 482
Query: 298 IISCTALISGFARDDNHS--KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQ 355
++ ++ISG HS KEAFD FK M + + M+N C+ ++S+ GRQ
Sbjct: 483 VVCWNSIISGLTI---HSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQ 539
Query: 356 IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGY 415
IHA K + VG+ALIDMYAK G + DA FD M KN+++W +I GYA++G
Sbjct: 540 IHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGL 599
Query: 416 GHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFS 475
G +A+EL++ M P+ VTF+++L CSH+GL + F M N Y I+P AEH++
Sbjct: 600 GDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYT 659
Query: 476 CVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPE 535
C++D R G+ +I +M K +W +L AC ++ N LG+ AA +LF ++P+
Sbjct: 660 CLIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNAELGKCAAEHLFRIDPK 719
Query: 536 KSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
YV+LSNIY + G +A R LM R + K GYS++
Sbjct: 720 NPSPYVLLSNIYASLGRHGDASAVRALMSNRGVVKGRGYSWI 761
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/469 (27%), Positives = 219/469 (46%), Gaps = 56/469 (11%)
Query: 59 NGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDE-NALL 117
N Y N LS + GD+ +AR MP RN VSW +IS A++ D A+
Sbjct: 73 NDYSYNAALSAA-----CRAGDLDAARDLLGGMPRRNAVSWNTVISALARSPGDGGEAVE 127
Query: 118 VFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYA 177
++ M G+ FT +S L AC + L GR G K N FV++ALL +Y
Sbjct: 128 MYGRMRAEGLLPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYT 187
Query: 178 KCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGS 237
KCG + DA LF + R + VS+ AM+GGLA G DD+ LF M R G+ D ++ S
Sbjct: 188 KCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSS 247
Query: 238 ILRASVGGI-------ELMKISQ-IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
+L A ++ Q IH L+++ G S + SLID+Y K + A ++
Sbjct: 248 VLGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKV 307
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ S+ I+S LI+GF ++ + +K A ++ M ++V +L C
Sbjct: 308 FESLPSVTIVSWNILITGFGQEGSCAK-AVEVLSLMQEAGFEPNEVTYSNLLASCIK--- 363
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
R +H+ A FD++ +V +W +L++G
Sbjct: 364 ---ARDVHS-----------------------------ARAMFDKISRPSVTTWNTLLSG 391
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
Y + + IEL+++M+H+ + P+ T +L +CS G+ G ++ + + R L
Sbjct: 392 YCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASV---RFLL 448
Query: 470 RAEHF--SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIY 516
+ F S +VD++++ GQ+ A ++ +M + W++I+ +I+
Sbjct: 449 HNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVV-CWNSIISGLTIH 496
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 120/479 (25%), Positives = 218/479 (45%), Gaps = 65/479 (13%)
Query: 102 MISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGR 161
++ Y++ G +ALL F A+ N ++Y++AL A R L R + G +
Sbjct: 49 LVELYSRAGLPRHALLAFRAL----PSPNDYSYNAALSAACRAGDLDAARDLLGGM---- 100
Query: 162 FVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ-GFNDDSFWLF 220
R++ VSWN +I LA G ++ ++
Sbjct: 101 -------------------------------PRRNAVSWNTVISALARSPGDGGEAVEMY 129
Query: 221 RSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKY 280
M +G+ P FTL S+L A G L + H + +K+GL+++ + +L+ +Y K
Sbjct: 130 GRMRAEGLLPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKC 189
Query: 281 GSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLM 340
GS+ A +L+ M + + +S TA++ G A+ + +A LF M + +D V + +
Sbjct: 190 GSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGS-IDDALRLFARMCRSGVPVDPVSVSSV 248
Query: 341 LNICANVASLN--------LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAF 392
L CA + + LG+ IHA + D VGN+LIDMY K E+ +A + F
Sbjct: 249 LGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVF 308
Query: 393 DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTC 452
+ + ++SW LI G+ + G +A+E+ M+ G PN+VT+ +LL +C
Sbjct: 309 ESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASCIKARDVH 368
Query: 453 EGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM---NIKPTASLWSAI 509
+F D I++ P ++ ++ + + Q + + R+M N++P + + I
Sbjct: 369 SARAMF-DKISR----PSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVI 423
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
L +CS G G SV +++ ++++ A+G D K ++ RS+
Sbjct: 424 LSSCSKLGILDFGRQVH--------SASVRFLLHNDMFVASGLVDMYSKCGQIGIARSI 474
>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
Length = 1037
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 179/565 (31%), Positives = 306/565 (54%), Gaps = 10/565 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T++S+L C + +H I N + +L ++ + Y+K G + A+ F
Sbjct: 435 DEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALF 494
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+P ++ +SW A+ G AQN +E A+ + M G+ + ++S+A+ AC+ +R +
Sbjct: 495 SLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATE 554
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ I K N V S+L+DLY+K G +E + +F +++ +V NA+I G
Sbjct: 555 TGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFV 614
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
D++ LF+ +++ G+KP T SIL G + Q+H +K G+ +
Sbjct: 615 QNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDT 674
Query: 269 LTG-SLIDVYAKYGSIRSAYQLYRSML-KTDIISCTALISGFARDD--NHSKEAFDLFKD 324
L G SL +Y K + A +L M ++ TA+ISG+A++ +HS +F +
Sbjct: 675 LLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRH 734
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ-SSYDAAVGNALIDMYAKSG 383
++ D+ +L C++V + G++IH K SY+ A +ALIDMY+K G
Sbjct: 735 CNVRS---DEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETAT-SALIDMYSKCG 790
Query: 384 EIADANRAFDEMGDK-NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
++ + AF E+ +K +++ W S+I G+AK+GY EA+ L++KM+ + P++VTFL +L
Sbjct: 791 DVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVL 850
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
AC+H+GL EG F M Y + PR +H++C +DL R G L+ A I Q+ +P
Sbjct: 851 IACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPD 910
Query: 503 ASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKL 562
+W+ L AC ++ + G++AAR L ++EP+ S YV+LS+++ A G W A+ TR+
Sbjct: 911 GVVWATYLAACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRES 970
Query: 563 MEERSLRKNPGYSFLQSSKKNILLL 587
M E+ + K PG S++ K L L
Sbjct: 971 MREKGVAKFPGCSWITVGNKTSLFL 995
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 146/482 (30%), Positives = 261/482 (54%), Gaps = 4/482 (0%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
ST+ S+L + KA + +HA + +G ++N+ + + +I YAK G A+ FD
Sbjct: 336 STFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDL 395
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
E+N+V W AM++G+ QN E A+ +F M+R ++ ++FT+ S L AC + G
Sbjct: 396 SCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLG 455
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ + K +LFV +A LD+Y+K G I DA LF I KD +SWNA+ GLA
Sbjct: 456 KQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQN 515
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
+++ + + M G+ PD + + + A QIH L IK G+ S++ +
Sbjct: 516 LEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVG 575
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
SLID+Y+K+G + S+ +++ + + I+ ALI+GF +++N EA LF+ ++ +
Sbjct: 576 SSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNE-DEAIQLFQQVLKDGL 634
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSY-DAAVGNALIDMYAKSGEIADAN 389
V +L+ C+ + +G+Q+H + K Y D +G +L +Y KS + DAN
Sbjct: 635 KPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDAN 694
Query: 390 RAFDEMGD-KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ EM D KN+ WT++I+GYA++GYG ++ + +M+H + ++ TF S+L ACS
Sbjct: 695 KLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDV 754
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
+G E+ +I K S ++D++++ G + S++ +++ K W++
Sbjct: 755 TAFADGKEIH-GLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNS 813
Query: 509 IL 510
++
Sbjct: 814 MI 815
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 148/518 (28%), Positives = 266/518 (51%), Gaps = 11/518 (2%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K G + A + ++CPDT+ + S++ ++A + + + G +
Sbjct: 215 KCGDVPNARRVFDGIACPDTI----CWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQV 270
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+I A G + A +MP + V+W A+ISG+AQ+G + N L ++ M G
Sbjct: 271 TLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWG 330
Query: 127 VRANQFTYSSALRACARMR-WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
+ + T++S L A A M+ +++G +M ++ G N+FV S+L++LYAKCG DA
Sbjct: 331 LWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHG-LDANVFVGSSLINLYAKCGCPSDA 389
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGG 245
+F+ K++V WNAM+ G +++ +F+ MMR ++ D FT SIL A
Sbjct: 390 KNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYL 449
Query: 246 IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALI 305
Q+H + IK ++ S + + +D+Y+KYG+I A L+ + D IS AL
Sbjct: 450 SSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALT 509
Query: 306 SGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS 365
G A++ +EA + K M L + DDV +N C+N+ + G+QIH A KY
Sbjct: 510 VGLAQNLEE-EEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGI 568
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKK 425
+ AVG++LID+Y+K G++ + + F ++ +++ +LIAG+ ++ EAI+L+++
Sbjct: 569 CSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQ 628
Query: 426 MKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRG 485
+ +G+ P+ VTF S+L CS + + G ++ + + + ++ +
Sbjct: 629 VLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSK 688
Query: 486 QLESAYNMIRQMNIKPTASLWSAILG--ACSIYGNTSL 521
LE A ++ +M W+AI+ A + YG+ SL
Sbjct: 689 MLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSL 726
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 154/626 (24%), Positives = 268/626 (42%), Gaps = 114/626 (18%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H I+ G L ++ Y K G V A A ER + ++++S +A++G
Sbjct: 88 LHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGS 147
Query: 112 DENALLVFSAM-LRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
+ L F + +G R +QF + L AC+R+ L GR + + K F ++F ++
Sbjct: 148 PGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEA 207
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
AL+D+YAKCG + +A +F+ I D + W++MI G ++ LF M + G P
Sbjct: 208 ALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAP 267
Query: 231 DCFTLGSILR--ASVGGIE----LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIR 284
D TL +I+ AS G ++ L+K + + S + +G +V Y +R
Sbjct: 268 DQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMR 327
Query: 285 S-----AYQLYRSMLK------------------------TDIISCTALISGFAR--DDN 313
S + SML ++ ++LI+ +A+ +
Sbjct: 328 SWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPS 387
Query: 314 HSKEAFDL----------------------------FKDMILKKMGIDDVILCLMLNICA 345
+K FDL F+ M+ + D+ +L C
Sbjct: 388 DAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACT 447
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
++S LG+Q+H K V NA +DMY+K G I DA F + K+ ISW +
Sbjct: 448 YLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNA 507
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
L G A++ EA+ + K+M+ G+ P+DV+F + + ACS+ T G ++ I KY
Sbjct: 508 LTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAI-KY 566
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMN--------------------------- 498
I S ++DL+++ G +ES+ + Q++
Sbjct: 567 GICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLF 626
Query: 499 -------IKPTASLWSAILGACSIYGNTSLGE------LAARNLFDMEPEKSVNYVVLSN 545
+KP++ +S+IL CS N+++G+ L + L+D ++ V L+
Sbjct: 627 QQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYD----DTLLGVSLAG 682
Query: 546 IYTAAGAWDNARKTRKLMEERSLRKN 571
IY + ++A KL+ E KN
Sbjct: 683 IYLKSKMLEDA---NKLLTEMPDHKN 705
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 157/369 (42%), Gaps = 39/369 (10%)
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
R R Q R + G I +G + +L++LY K G + AW + + ++
Sbjct: 78 RARHSQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASS 137
Query: 203 MIGGLAMQGFNDDSFWLFRSM-MRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKL 261
++ A G D FR + G +PD F L +L A L Q+H ++K
Sbjct: 138 LLSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKS 197
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDL 321
G SS +L+D+YAK G + +A +++ + D I +++I+ + R + +EA L
Sbjct: 198 GFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCY-QEALAL 256
Query: 322 FKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
F M KMG S+ D +I A
Sbjct: 257 FSRM--DKMG---------------------------------SAPDQVTLVTIISTLAS 281
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
SG + A +M + ++W ++I+G+A+ G + LYK M+ G+ P TF S+
Sbjct: 282 SGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASM 341
Query: 442 LFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
L A ++ EG ++ + + + S +++L+A+ G A N+ ++ +
Sbjct: 342 LSAAANMKAFVEGQQMHAAAV-MHGLDANVFVGSSLINLYAKCGCPSDAKNVF-DLSCEK 399
Query: 502 TASLWSAIL 510
+W+A+L
Sbjct: 400 NIVMWNAML 408
>gi|359480813|ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Vitis vinifera]
Length = 634
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 187/530 (35%), Positives = 283/530 (53%), Gaps = 45/530 (8%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H ++ G E +L + +I Y+K GDV S R+ FD M ER+V+SW +MISGY NG+
Sbjct: 146 VHKDVVICGCEFDLQVCNSLIDMYSKSGDVGSGRRVFDEMVERDVLSWNSMISGYVCNGF 205
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
E ++ + ++M G + T+++
Sbjct: 206 LEFSVELLASMRIRGFEPDMVTWNT----------------------------------- 230
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMM-RQGMKP 230
++D Y + G ++AW +FE+I+ +++S ++ G + G ++ S +FR MM R+ P
Sbjct: 231 VMDAYCRMGLCDEAWEIFEQIKEPNIISLTTLVSGYSRIGNHEKSLGIFREMMSRRVAFP 290
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN--KLTGS-LIDVYAKYGSIRSAY 287
D +L S+L + L+ +IH I+ ++SS+ K G+ L+ +Y K I+ A
Sbjct: 291 DLDSLSSVLVSCRHLGALVCGQEIHGYGIR-SVDSSSFYKSAGAALLTMYVKCKRIQDAL 349
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
++ M + D+++ A+I GF D A + F M + + + + +L C
Sbjct: 350 NVFELMDRFDVVTWNAMILGFV-DLEMGHLALECFSKMQRSGIMNNQITISTVLPAC--- 405
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI 407
L G+Q+HA+ K S V NALI MY+K G I A F M ++++SW ++I
Sbjct: 406 -DLKSGKQVHAYITKNSFSSVIPVWNALIHMYSKCGCIGTAYSIFSNMISRDLVSWNTMI 464
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRI 467
G+ HG G A++L + M H + PN VTF S L ACSH+GL EG ELF M +
Sbjct: 465 GGFGMHGLGQFALQLLRDMSHSDVCPNSVTFTSALSACSHSGLVDEGMELFHTMTRDFGF 524
Query: 468 LPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAAR 527
P EHFSCVVDL AR +LE A I +M +KP+ +WSA+L AC N S+ +LAA
Sbjct: 525 TPGMEHFSCVVDLLARADRLEDAVGFIEKMPLKPSKHIWSALLAACRAQQNVSVAKLAAE 584
Query: 528 NLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
LF +EPE + NYV LSNIY AG WD+A RKLME+R L K GYS++
Sbjct: 585 QLFQLEPEHAGNYVTLSNIYARAGRWDDAVAVRKLMEDRGLVKPSGYSWI 634
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 137/501 (27%), Positives = 253/501 (50%), Gaps = 50/501 (9%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
LLQ C + KA Q +H HII G + + + TK++ YA GD+ SA+ FD++ + N
Sbjct: 29 LLQLCSNSKALHQGKQLHQHIILCGLDHHPFMLTKLVQMYADCGDLGSAQALFDKLSQPN 88
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG 155
V +WTA++ Y++NG + + +S M GV +++ + RAC ++ WL+ G +
Sbjct: 89 VFAWTAILGFYSRNGLSDECVRTYSEMKLKGVLPDKYVFPKVFRACGQLLWLEVGIQVHK 148
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD 215
+ +L V ++L+D+Y+K G + +F+ + +DV+SWN+MI G GF +
Sbjct: 149 DVVICGCEFDLQVCNSLIDMYSKSGDVGSGRRVFDEMVERDVLSWNSMISGYVCNGFLEF 208
Query: 216 SFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLID 275
S L SM +G +PD T +++ D
Sbjct: 209 SVELLASMRIRGFEPDMVTWNTVM-----------------------------------D 233
Query: 276 VYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDV 335
Y + G A++++ + + +IIS T L+SG++R NH K + +F++M+ +++ D+
Sbjct: 234 AYCRMGLCDEAWEIFEQIKEPNIISLTTLVSGYSRIGNHEK-SLGIFREMMSRRVAFPDL 292
Query: 336 -ILCLMLNICANVASLNLGRQIHAFAFKY--QSSYDAAVGNALIDMYAKSGEIADANRAF 392
L +L C ++ +L G++IH + + SS+ + G AL+ MY K I DA F
Sbjct: 293 DSLSSVLVSCRHLGALVCGQEIHGYGIRSVDSSSFYKSAGAALLTMYVKCKRIQDALNVF 352
Query: 393 DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS-HTGLT 451
+ M +V++W ++I G+ GH A+E + KM+ G++ N +T ++L AC +G
Sbjct: 353 ELMDRFDVVTWNAMILGFVDLEMGHLALECFSKMQRSGIMNNQITISTVLPACDLKSGKQ 412
Query: 452 CEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
+ I K ++ ++ ++++ G + +AY++ M + S W+ ++G
Sbjct: 413 VHAY------ITKNSFSSVIPVWNALIHMYSKCGCIGTAYSIFSNMISRDLVS-WNTMIG 465
Query: 512 ACSIYGNTSLGELAARNLFDM 532
++G LG+ A + L DM
Sbjct: 466 GFGMHG---LGQFALQLLRDM 483
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 144/295 (48%), Gaps = 10/295 (3%)
Query: 233 FTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRS 292
F L +L+ L + Q+H II GL+ + L+ +YA G + SA L+
Sbjct: 24 FQLNHLLQLCSNSKALHQGKQLHQHIILCGLDHHPFMLTKLVQMYADCGDLGSAQALFDK 83
Query: 293 MLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNL 352
+ + ++ + TA++ GF + S E + +M LK + D + + C + L +
Sbjct: 84 LSQPNVFAWTAIL-GFYSRNGLSDECVRTYSEMKLKGVLPDKYVFPKVFRACGQLLWLEV 142
Query: 353 GRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAK 412
G Q+H +D V N+LIDMY+KSG++ R FDEM +++V+SW S+I+GY
Sbjct: 143 GIQVHKDVVICGCEFDLQVCNSLIDMYSKSGDVGSGRRVFDEMVERDVLSWNSMISGYVC 202
Query: 413 HGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAE 472
+G+ ++EL M+ G P+ VT+ +++ A GL E WE+F + P
Sbjct: 203 NGFLEFSVELLASMRIRGFEPDMVTWNTVMDAYCRMGLCDEAWEIFEQIKE-----PNII 257
Query: 473 HFSCVVDLFARRGQLESAYNMIRQMNIK----PTASLWSAILGACSIYGNTSLGE 523
+ +V ++R G E + + R+M + P S++L +C G G+
Sbjct: 258 SLTTLVSGYSRIGNHEKSLGIFREMMSRRVAFPDLDSLSSVLVSCRHLGALVCGQ 312
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 178/584 (30%), Positives = 305/584 (52%), Gaps = 73/584 (12%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY ++Q C + E IH H++ G++S++++ +I YA G++ ARK F
Sbjct: 140 DNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLF 199
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D P + VSW ++++GY + G E A L+F M +
Sbjct: 200 DESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQ------------------------ 235
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
N+ ++++ L K G + +AW LF ++ KD+VSW+A+I G
Sbjct: 236 ---------------RNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYE 280
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSN 267
G +++ +F M GM+ D + S+L A + ++K + IH L+I++G+ES
Sbjct: 281 QNGMYEEALVMFIEMNANGMRLDEVVVVSVLSA-CAHLSIVKTGKMIHGLVIRMGIESYV 339
Query: 268 KLTGSLIDVYA-------------------------------KYGSIRSAYQLYRSMLKT 296
L +LI +Y+ K GS+ A L+ M +
Sbjct: 340 NLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEK 399
Query: 297 DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI 356
DI+S +A+ISG+A+ D S E LF +M L ++ D+ IL +++ C ++A+L+ G+ +
Sbjct: 400 DIVSWSAVISGYAQHDCFS-ETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWV 458
Query: 357 HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYG 416
HA+ K + +G L+DMY K G + +A F+ M +K V SW +LI G A +G
Sbjct: 459 HAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLV 518
Query: 417 HEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSC 476
+++++ +MK+ G++PN++TF+ +L AC H GL EG F MI K+ I P +H+ C
Sbjct: 519 ERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGC 578
Query: 477 VVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEK 536
+VDL R G L A +I M + P + W A+LGAC +G+T +GE R L +++P+
Sbjct: 579 MVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDH 638
Query: 537 SVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSS 580
+V+LSNI+ + G W++ + R +M+++ + K PG S ++++
Sbjct: 639 DGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEAN 682
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 142/574 (24%), Positives = 275/574 (47%), Gaps = 88/574 (15%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAE-RQAHLIHAHIITNGYESNLHL 67
K QL ALK + + T P+ +S+L+ + +Q + I + +I G+ S+
Sbjct: 17 KLNQLSSALKSTFNHKPTF-KPTITLSILETHLHNCHNLKQFNRILSQMILTGFISDTFA 75
Query: 68 STKVIIFYAK---VGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLR 124
+++++ F +G + + + FDR+ N W M+ Y Q+ E ALL++ M++
Sbjct: 76 ASRLLKFSTDSPFIG-LDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVK 134
Query: 125 SGVRANQFTYSSALRACARMRWLQ-GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIE 183
+ V + +TY ++ACA +R L+ GG+ I + K F +++V++ L+++YA CG +
Sbjct: 135 NNVGPDNYTYPLVVQACA-VRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMR 193
Query: 184 DAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV 243
DA LF+ D VSWN+++ G +G +++ +F M ++ +
Sbjct: 194 DARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNIVA------------- 240
Query: 244 GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTA 303
+ S+I + K G + A++L+ M + D++S +A
Sbjct: 241 --------------------------SNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSA 274
Query: 304 LISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY 363
LISG+ ++ + +EA +F +M M +D+V++ +L+ CA+++ + G+ IH +
Sbjct: 275 LISGYEQNGMY-EEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRM 333
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANR-------------------------------AF 392
+ NALI MY+ SGEI DA + F
Sbjct: 334 GIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALF 393
Query: 393 DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTC 452
D M +K+++SW+++I+GYA+H E + L+ +M+ + P++ +S++ AC+H
Sbjct: 394 DVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALD 453
Query: 453 EGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
+G + I K + + ++D++ + G +E+A + M K +S W+A++
Sbjct: 454 QG-KWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSS-WNALIIG 511
Query: 513 CSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
++ G L R+L DM E N V+ + I
Sbjct: 512 LAVNG------LVERSL-DMFSEMKNNGVIPNEI 538
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 207/447 (46%), Gaps = 54/447 (12%)
Query: 136 SALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWI--EDAWILFERIE 193
+ L C ++ Q R++ I G F+ + F S LL +I + + +F+RIE
Sbjct: 46 THLHNCHNLK--QFNRILSQMILTG-FISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIE 102
Query: 194 RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ 253
+ WN M+ + + L++ M++ + PD +T +++A + +
Sbjct: 103 NSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKE 162
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN 313
IHD ++K+G +S + +LI++YA G++R A +L+ D +S ++++G+ + +
Sbjct: 163 IHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGD 222
Query: 314 HSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN 373
+EA +F M + NI A+ N
Sbjct: 223 -VEEAKLIFDQMPQR-------------NIVAS--------------------------N 242
Query: 374 ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP 433
++I + K G++ +A + F+EM +K+++SW++LI+GY ++G EA+ ++ +M GM
Sbjct: 243 SMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRL 302
Query: 434 NDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNM 493
++V +S+L AC+H + G ++ ++ + I + ++ +++ G++ A +
Sbjct: 303 DEVVVVSVLSACAHLSIVKTG-KMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKL 361
Query: 494 IRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAW 553
+ S W++++ C G+ AR LFD+ PEK + V S + +
Sbjct: 362 FNGSHNLDQIS-WNSMISGCMKCGSVE----KARALFDVMPEKDI--VSWSAVISGYAQH 414
Query: 554 DNARKTRKLMEERSLRK-NPGYSFLQS 579
D +T L E L + P + L S
Sbjct: 415 DCFSETLALFHEMQLGQIRPDETILVS 441
>gi|242062166|ref|XP_002452372.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
gi|241932203|gb|EES05348.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
Length = 691
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 275/482 (57%), Gaps = 3/482 (0%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
+ ++ C + +H ++ GY+ ++ + ++ Y+K+GD+ A F+++P
Sbjct: 205 FSCVVNACTGSRDWETGRQVHGMVVRTGYDKDVFTANALVDMYSKLGDIEMAAVVFEKIP 264
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
+VVSW A+I+G +G+D AL + M GV N FT SS L+ACA GR
Sbjct: 265 AADVVSWNALIAGCVTHGHDHRALELLLQMKPLGVVPNVFTLSSVLKACAGAGAFNLGRQ 324
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF 212
I G + K + FV L+D+YAK G+++DA +F+ + R+D++ WNA+I G + G
Sbjct: 325 IHGFMIKADADSDEFVAVGLVDMYAKDGFLDDARKVFDFMPRRDLILWNALISGCSHDGR 384
Query: 213 NDDSFWLFRSMMRQGMKPDC--FTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
+ + LF M ++G+ D TL ++L+++ + Q+H L K+GL S + +
Sbjct: 385 HGEVLSLFHRMRKEGLDLDVNRTTLAAVLKSTASLEAICHTKQVHALAEKIGLLSDSHVV 444
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
LID Y K G + A +++ DIIS T++++ ++ D H ++A LF M+ K +
Sbjct: 445 NGLIDSYWKCGRLDYAIKVFEESCSDDIISSTSMMTALSQCD-HGEDAIKLFVQMLRKGL 503
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
D +L +LN CA++++ G+Q+HA K Q + D GNAL+ YAK G I DA+
Sbjct: 504 EPDSFVLSSLLNACASLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYTYAKCGSIEDADM 563
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
AF + +K V+SW+++I G A+HG+G A+EL+ +M EG+ PN++T S+L AC+H GL
Sbjct: 564 AFSGLPEKGVVSWSAMIGGLAQHGHGKRALELFHRMLDEGVAPNNITLTSVLSACNHAGL 623
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
+ + F M + I EH++C++D+ R G+L+ A ++ M + A++W A+L
Sbjct: 624 VDDAKKYFESMKEAFGIDRTEEHYACMIDILGRAGKLKDAMELVNNMPFQANAAVWGALL 683
Query: 511 GA 512
GA
Sbjct: 684 GA 685
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 166/524 (31%), Positives = 272/524 (51%), Gaps = 19/524 (3%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP-ERNVVSWTAMISGYAQNG 110
+HA + ++ ++ ++ Y G V A++ FD ERN VSW MIS Y +N
Sbjct: 122 VHALAVATRLIQDVFVTNALVAMYGGFGMVDEAKRIFDEPGGERNAVSWNGMISAYVKND 181
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
+A+ VF M+ SG R N+F +S + AC R + GR + G + + + +++F +
Sbjct: 182 RCRDAVGVFREMVWSGERPNEFGFSCVVNACTGSRDWETGRQVHGMVVRTGYDKDVFTAN 241
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
AL+D+Y+K G IE A ++FE+I DVVSWNA+I G G + + L M G+ P
Sbjct: 242 ALVDMYSKLGDIEMAAVVFEKIPAADVVSWNALIAGCVTHGHDHRALELLLQMKPLGVVP 301
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
+ FTL S+L+A G QIH +IK +S + L+D+YAK G + A +++
Sbjct: 302 NVFTLSSVLKACAGAGAFNLGRQIHGFMIKADADSDEFVAVGLVDMYAKDGFLDDARKVF 361
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGID-DV---ILCLMLNICAN 346
M + D+I ALISG + D H E LF M +K G+D DV L +L A+
Sbjct: 362 DFMPRRDLILWNALISGCSHDGRHG-EVLSLFHRM--RKEGLDLDVNRTTLAAVLKSTAS 418
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
+ ++ +Q+HA A K D+ V N LID Y K G + A + F+E ++IS TS+
Sbjct: 419 LEAICHTKQVHALAEKIGLLSDSHVVNGLIDSYWKCGRLDYAIKVFEESCSDDIISSTSM 478
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYR 466
+ ++ +G +AI+L+ +M +G+ P+ SLL AC+ +G ++ +I K +
Sbjct: 479 MTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACASLSAYEQGKQVHAHLI-KRQ 537
Query: 467 ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAA 526
+ +V +A+ G +E A + K S WSA++G + +G+ A
Sbjct: 538 FTSDVFAGNALVYTYAKCGSIEDADMAFSGLPEKGVVS-WSAMIGGLAQHGHGK----RA 592
Query: 527 RNLFDMEPEKSV--NYVVLSNIYTA---AGAWDNARKTRKLMEE 565
LF ++ V N + L+++ +A AG D+A+K + M+E
Sbjct: 593 LELFHRMLDEGVAPNNITLTSVLSACNHAGLVDDAKKYFESMKE 636
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 130/473 (27%), Positives = 235/473 (49%), Gaps = 16/473 (3%)
Query: 30 PSTYMSLL-QFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
P T S L +F + AHL H+H++ +G ++ S ++ FY++ +AR F
Sbjct: 4 PGTIGSALARFGASRSLLAGAHL-HSHLLKSGLLASY--SNHLLSFYSRCRLPSAARAVF 60
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D +P+ VSW+++++ Y+ NG +AL F +M GV N++ L+ +R+
Sbjct: 61 DEIPDPCHVSWSSLVTAYSNNGMPRDALWAFRSMRGRGVPCNEYALPIVLKCAPDVRF-- 118
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILF-ERIERKDVVSWNAMIGGL 207
G + R ++++FV +AL+ +Y G +++A +F E ++ VSWN MI
Sbjct: 119 -GAQVHALAVATRLIQDVFVTNALVAMYGGFGMVDEAKRIFDEPGGERNAVSWNGMISAY 177
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
D+ +FR M+ G +P+ F ++ A G + Q+H ++++ G +
Sbjct: 178 VKNDRCRDAVGVFREMVWSGERPNEFGFSCVVNACTGSRDWETGRQVHGMVVRTGYDKDV 237
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+L+D+Y+K G I A ++ + D++S ALI+G H A +L M
Sbjct: 238 FTANALVDMYSKLGDIEMAAVVFEKIPAADVVSWNALIAGCVT-HGHDHRALELLLQM-- 294
Query: 328 KKMGIDDVILCL--MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
K +G+ + L +L CA + NLGRQIH F K + D V L+DMYAK G +
Sbjct: 295 KPLGVVPNVFTLSSVLKACAGAGAFNLGRQIHGFMIKADADSDEFVAVGLVDMYAKDGFL 354
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG--MVPNDVTFLSLLF 443
DA + FD M +++I W +LI+G + G E + L+ +M+ EG + N T ++L
Sbjct: 355 DDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLAAVLK 414
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQ 496
+ + C ++ + K +L + + ++D + + G+L+ A + +
Sbjct: 415 STASLEAICHTKQVHA-LAEKIGLLSDSHVVNGLIDSYWKCGRLDYAIKVFEE 466
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 196/411 (47%), Gaps = 21/411 (5%)
Query: 11 GQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLS 68
G +AL+ L + P+ + S+L+ C A IH +I +S+ ++
Sbjct: 282 GHDHRALELLLQMKPLGVVPNVFTLSSVLKACAGAGAFNLGRQIHGFMIKADADSDEFVA 341
Query: 69 TKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG-- 126
++ YAK G + ARK FD MP R+++ W A+ISG + +G L +F M + G
Sbjct: 342 VGLVDMYAKDGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLD 401
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
+ N+ T ++ L++ A + + + + +K + + V + L+D Y KCG ++ A
Sbjct: 402 LDVNRTTLAAVLKSTASLEAICHTKQVHALAEKIGLLSDSHVVNGLIDSYWKCGRLDYAI 461
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+FE D++S +M+ L+ +D+ LF M+R+G++PD F L S+L A
Sbjct: 462 KVFEESCSDDIISSTSMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACASLS 521
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
+ Q+H +IK S +L+ YAK GSI A + + + ++S +A+I
Sbjct: 522 AYEQGKQVHAHLIKRQFTSDVFAGNALVYTYAKCGSIEDADMAFSGLPEKGVVSWSAMIG 581
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
G A+ H K A +LF M+ + + +++ L +L+ C + ++ + KY S
Sbjct: 582 GLAQ-HGHGKRALELFHRMLDEGVAPNNITLTSVLSACNHAGLVDDAK-------KYFES 633
Query: 367 YDAAVG--------NALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIA 408
A G +ID+ ++G++ DA + M N W +L+
Sbjct: 634 MKEAFGIDRTEEHYACMIDILGRAGKLKDAMELVNNMPFQANAAVWGALLG 684
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 167/503 (33%), Positives = 284/503 (56%), Gaps = 14/503 (2%)
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
K FDR +V SW ++I+ A+ G +L FS M + ++ N+ T+ A+++C+ +
Sbjct: 40 KYFDRT---DVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALF 96
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
L G+ F +LFV SAL+D+Y+KCG + +A +LF+ I R+++V+W ++I
Sbjct: 97 DLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLIT 156
Query: 206 GLAMQGFNDDSFWLFRSMMRQ---------GMKPDCFTLGSILRASVGGIELMKISQIHD 256
G ++ +F+ + + G D + S+L A +H
Sbjct: 157 GYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHG 216
Query: 257 LIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSK 316
+ IK+GL+ + +L+D YAK G + + +++ M + D++S ++I+ +A++ S
Sbjct: 217 VAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQN-GLST 275
Query: 317 EAFDLFKDMILKKMG-IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNAL 375
+AF++F M+ G ++V L +L CA+ +L +G +H K + + ++
Sbjct: 276 DAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSI 335
Query: 376 IDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND 435
IDMY K G+ A AFD M +KNV SWT++IAGY HG+ EA++++ +M G+ PN
Sbjct: 336 IDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNY 395
Query: 436 VTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIR 495
+TF+S+L ACSH G EGW F M ++Y + P EH+ C+VDL R G ++ AYN+I+
Sbjct: 396 ITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIK 455
Query: 496 QMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDN 555
M ++ LW ++L AC I+ + L E++AR LF ++P YV+L+NIY AG W +
Sbjct: 456 SMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRWKD 515
Query: 556 ARKTRKLMEERSLRKNPGYSFLQ 578
+ R L+++R L K PGYS ++
Sbjct: 516 VERMRILVKDRGLVKPPGYSLVE 538
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 199/404 (49%), Gaps = 19/404 (4%)
Query: 25 DTLLDPSTYMSLLQFC---IDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDV 81
D + ST+ ++ C D + +QAH + G+ES+L +S+ +I Y+K G +
Sbjct: 77 DIKPNRSTFPCAIKSCSALFDLNSGKQAH---QQALVFGFESDLFVSSALIDMYSKCGKL 133
Query: 82 LSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML---------RSGVRANQF 132
+AR FD +P RN+V+WT++I+GY QN AL+VF L G +
Sbjct: 134 SNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSV 193
Query: 133 TYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI 192
S L AC+R+ + G K + + V++ LLD YAKCG + + +F+ +
Sbjct: 194 AMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDM 253
Query: 193 ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ-GMKPDCFTLGSILRASVGGIELMKI 251
KDVVSWN+MI A G + D+F +F M++ G K + TL ++L A L
Sbjct: 254 AEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVG 313
Query: 252 SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD 311
+HD +IK+G ++ + S+ID+Y K G A + M + ++ S TA+I+G+
Sbjct: 314 MCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGM- 372
Query: 312 DNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDAA 370
++EA D+F MI + + + +L C++ L G R +A + +Y
Sbjct: 373 HGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVE 432
Query: 371 VGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKH 413
++D+ ++G I +A M ++ + W SL+A H
Sbjct: 433 HYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIH 476
>gi|356529928|ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 690
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 164/456 (35%), Positives = 267/456 (58%), Gaps = 3/456 (0%)
Query: 133 TYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI 192
TY + + AC +R ++G + + + F +L+V + +L ++ KCG + DA LF+ +
Sbjct: 119 TYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVMNRVLFVHVKCGLMLDARKLFDEM 178
Query: 193 ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS 252
KD+ SW MIGG G ++F LF M + T +++RAS G+ L+++
Sbjct: 179 PEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRAS-AGLGLVQVG 237
Query: 253 -QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD 311
QIH +K G+ ++ +LID+Y+K GSI A+ ++ M + + ++I+ +A
Sbjct: 238 RQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALH 297
Query: 312 DNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAV 371
+S+EA + +M ID + +++ ICA +ASL +Q HA + D
Sbjct: 298 -GYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIVA 356
Query: 372 GNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGM 431
AL+D Y+K G + DA F+ M KNVISW +LIAGY HG G EA+E++++M EGM
Sbjct: 357 NTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQMLREGM 416
Query: 432 VPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAY 491
+PN VTFL++L ACS++GL+ GWE+F M +++ PRA H++C+V+L R G L+ AY
Sbjct: 417 IPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMVELLGREGLLDEAY 476
Query: 492 NMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAG 551
+IR KPT ++W+ +L AC ++ N LG+LAA NL+ MEPEK NY+VL N+Y ++G
Sbjct: 477 ELIRSAPFKPTTNMWATLLTACRMHENLELGKLAAENLYGMEPEKLCNYIVLLNLYNSSG 536
Query: 552 AWDNARKTRKLMEERSLRKNPGYSFLQSSKKNILLL 587
A + ++ + LR P ++++ K++ L
Sbjct: 537 KLKEAAGVLQTLKRKGLRMLPACTWIEVKKQSYAFL 572
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 172/315 (54%), Gaps = 1/315 (0%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
STY +L+ C+ ++ R + +++ +G+E +L++ +V+ + K G +L ARK FD
Sbjct: 118 STYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVMNRVLFVHVKCGLMLDARKLFDE 177
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
MPE+++ SW MI G+ +G A +F M T+++ +RA A + +Q G
Sbjct: 178 MPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRASAGLGLVQVG 237
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
R I K ++ FV AL+D+Y+KCG IEDA +F+++ K V WN++I A+
Sbjct: 238 RQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALH 297
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
G+++++ + M G K D FT+ ++R L Q H +++ G ++
Sbjct: 298 GYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIVAN 357
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
+L+D Y+K+G + A+ ++ M + ++IS ALI+G+ + +EA ++F+ M+ + M
Sbjct: 358 TALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYG-NHGQGEEAVEMFEQMLREGM 416
Query: 331 GIDDVILCLMLNICA 345
+ V +L+ C+
Sbjct: 417 IPNHVTFLAVLSACS 431
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 4/204 (1%)
Query: 11 GQLKQALKFSLSCPDT--LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLS 68
G ++AL F D+ +D T +++ C + A HA ++ GY++++ +
Sbjct: 298 GYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIVAN 357
Query: 69 TKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR 128
T ++ FY+K G + A F+RM +NV+SW A+I+GY +G E A+ +F MLR G+
Sbjct: 358 TALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQMLREGMI 417
Query: 129 ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA-LLDLYAKCGWIEDAWI 187
N T+ + L AC+ + G I S+ + V+ + A +++L + G +++A+
Sbjct: 418 PNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMVELLGREGLLDEAYE 477
Query: 188 LFERIERKDVVS-WNAMIGGLAMQ 210
L K + W ++ M
Sbjct: 478 LIRSAPFKPTTNMWATLLTACRMH 501
>gi|356557931|ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 764
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 187/580 (32%), Positives = 307/580 (52%), Gaps = 10/580 (1%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITN 59
+I+ +TG++ +A + PS T +SLL F + + A Q +H I
Sbjct: 140 SIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTMLSLL-FGVSELAHVQC--LHGSAILY 196
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G+ S+++LS ++ Y K ++ +RK FD M +R++VSW +++S YAQ GY LL+
Sbjct: 197 GFMSDINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLL 256
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
M G + T+ S L A L+ GR + G I + F + V+++L+ +Y K
Sbjct: 257 KTMRIQGFEPDPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKG 316
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G I+ A+ +FER KDVV W AMI GL G D + +FR M++ G+K T+ S++
Sbjct: 317 GNIDIAFRMFERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVI 376
Query: 240 RA--SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
A +G L + +H + + L SL+ ++AK G + + ++ M K +
Sbjct: 377 TACAQLGSYNLG--TSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRN 434
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
++S A+I+G+A++ K F LF +M D + + +L CA+ L+LG+ IH
Sbjct: 435 LVSWNAMITGYAQNGYVCKALF-LFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIH 493
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
+F + V +L+DMY K G++ A R F++M +++SW+++I GY HG G
Sbjct: 494 SFVIRNGLRPCILVDTSLVDMYCKCGDLDIAQRCFNQMPSHDLVSWSAIIVGYGYHGKGE 553
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
A+ Y K GM PN V FLS+L +CSH GL +G ++ M + I P EH +CV
Sbjct: 554 TALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTRDFGIAPNLEHHACV 613
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKS 537
VDL +R G++E AYN+ ++ P + IL AC GN LG+ A ++ ++P +
Sbjct: 614 VDLLSRAGRVEEAYNLYKKKFSDPVLDVLGIILDACRANGNNELGDTIANDILMLKPMDA 673
Query: 538 VNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
N+V L++ Y + W+ + M L+K PG+SF+
Sbjct: 674 GNFVQLAHCYASINKWEEVGEAWTHMRSLGLKKIPGWSFI 713
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 153/501 (30%), Positives = 268/501 (53%), Gaps = 13/501 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ SLL+ C +H I+ +G + ++++ +I FYAK G ARK F
Sbjct: 68 DAYTFPSLLKACSSLNLFSLGLSLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVF 127
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D MPERNVV WT++I Y++ G A +F M R G++ + T S L + + +Q
Sbjct: 128 DFMPERNVVPWTSIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTMLSLLFGVSELAHVQ 187
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
+ GS F+ ++ + +++L +Y KC IE + LF+ ++++D+VSWN+++ A
Sbjct: 188 ---CLHGSAILYGFMSDINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYA 244
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G+ + L ++M QG +PD T GS+L + EL +H I++ +
Sbjct: 245 QIGYICEVLLLLKTMRIQGFEPDPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAH 304
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ SLI +Y K G+I A++++ L D++ TA+ISG ++ + K A +F+ M+
Sbjct: 305 VETSLIVMYLKGGNIDIAFRMFERSLDKDVVLWTAMISGLVQNGSADK-ALAVFRQMLKF 363
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ + ++ CA + S NLG +H + F+++ D A N+L+ M+AK G + +
Sbjct: 364 GVKSSTATMASVITACAQLGSYNLGTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQS 423
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ FD+M +N++SW ++I GYA++GY +A+ L+ +M+ + P+ +T +SLL C+ T
Sbjct: 424 SIVFDKMNKRNLVSWNAMITGYAQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCAST 483
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL--W 506
G G + + +I + + P + +VD++ + G L+ A QM P+ L W
Sbjct: 484 GQLHLGKWIHSFVI-RNGLRPCILVDTSLVDMYCKCGDLDIAQRCFNQM---PSHDLVSW 539
Query: 507 SAILGACSIYGNTSLGELAAR 527
SAI+ YG GE A R
Sbjct: 540 SAIIVG---YGYHGKGETALR 557
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 212/413 (51%), Gaps = 6/413 (1%)
Query: 98 SWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSI 157
S+ A+I+ ++ G L +++ML++ V ++ +T+ S L+AC+ + G + I
Sbjct: 36 SFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLSLHQRI 95
Query: 158 QKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSF 217
+ ++ S+L++ YAK G+ + A +F+ + ++VV W ++IG + G ++F
Sbjct: 96 LVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPEAF 155
Query: 218 WLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVY 277
LF M RQG++P T+ S+L G EL + +H I G S L+ S++ +Y
Sbjct: 156 SLFDEMRRQGIQPSSVTMLSLL---FGVSELAHVQCLHGSAILYGFMSDINLSNSMLSMY 212
Query: 278 AKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVIL 337
K +I + +L+ M + D++S +L+S +A+ + E L K M ++ D
Sbjct: 213 GKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQ-IGYICEVLLLLKTMRIQGFEPDPQTF 271
Query: 338 CLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD 397
+L++ A+ L LGR +H + DA V +LI MY K G I A R F+ D
Sbjct: 272 GSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMFERSLD 331
Query: 398 KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWEL 457
K+V+ WT++I+G ++G +A+ ++++M G+ + T S++ AC+ G G +
Sbjct: 332 KDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGSYNLGTSV 391
Query: 458 FTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
M + A S +V + A+ G L+ + + +MN + S W+A++
Sbjct: 392 HGYMFRHELPMDIATQNS-LVTMHAKCGHLDQSSIVFDKMNKRNLVS-WNAMI 442
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 136/329 (41%), Gaps = 53/329 (16%)
Query: 289 LYRSMLKTDIIS------CTALISGFARDDNHS------KEAFDLFKDMILKKMGIDDVI 336
L RS LK ++S +A I+ F NH ++ + M+ + D
Sbjct: 12 LSRSGLKRYVVSLPHPSSASATINSFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYT 71
Query: 337 LCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG 396
+L C+++ +LG +H S DA + ++LI+ YAK G A + FD M
Sbjct: 72 FPSLLKACSSLNLFSLGLSLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMP 131
Query: 397 DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA--------CSHT 448
++NV+ WTS+I Y++ G EA L+ +M+ +G+ P+ VT LSLLF C H
Sbjct: 132 ERNVVPWTSIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTMLSLLFGVSELAHVQCLHG 191
Query: 449 GLTCEGW----ELFTDMINKYRILPRAEHFSCVVDLFARR-----GQLESAYNMI----- 494
G+ L M++ Y E+ + D +R L SAY I
Sbjct: 192 SAILYGFMSDINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICE 251
Query: 495 --------RQMNIKPTASLWSAILGACSIYGNTSLGEL----AARNLFDMEPEKSVNYVV 542
R +P + ++L + G LG R FD++ + +V
Sbjct: 252 VLLLLKTMRIQGFEPDPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIV 311
Query: 543 LSNIYTAAGAWDNARKTRKLMEERSLRKN 571
+ Y G D A + M ERSL K+
Sbjct: 312 M---YLKGGNIDIAFR----MFERSLDKD 333
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 172/501 (34%), Positives = 282/501 (56%), Gaps = 18/501 (3%)
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLR-SGVRANQFTYSSALRACARMRWLQGGRMI 153
N SW I G+ + A++++ +L+ G + + +TY +ACAR+ ++ G I
Sbjct: 42 NTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEI 101
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN 213
G + F ++FV +A++ L CG ++ A +F++ +D+VSWN+MI G +G+
Sbjct: 102 LGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWA 161
Query: 214 DDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSL 273
++ +R M +G+KPD T+ ++ + +L + H I + GL+ + L +L
Sbjct: 162 YEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANAL 221
Query: 274 IDVYAKYGSIRSAYQLYRSMLKT----------------DIISCTALISGFARDDNHSKE 317
+D+Y K G++ SA +L+ SM D++ A+I G+ N KE
Sbjct: 222 MDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHA-NRGKE 280
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
A LF +M + D+V + L+ C+ + +L++G IH + K++ S + A+G ALID
Sbjct: 281 ALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALID 340
Query: 378 MYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVT 437
MYAK G+I A + F E+ +N ++WT++I+G A HG H AI + +M ++P++VT
Sbjct: 341 MYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVT 400
Query: 438 FLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
FL LL AC H GL EG + F+ M +K+ + P+ +H+SC+VDL R G LE A +I+ M
Sbjct: 401 FLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSM 460
Query: 498 NIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNAR 557
I+ A +W A+ AC I+GN +GE AA L M+P S YV+L+N+Y A W A
Sbjct: 461 PIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAG 520
Query: 558 KTRKLMEERSLRKNPGYSFLQ 578
K RKLM +R + K PG S ++
Sbjct: 521 KXRKLMRQRGVEKTPGCSSIE 541
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 199/417 (47%), Gaps = 23/417 (5%)
Query: 18 KFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAK 77
K L C T D TY L + C R I H++ G++S++ +S VI
Sbjct: 67 KRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVS 126
Query: 78 VGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSA 137
GD+ ARK FD+ R++VSW +MI+GY + G+ AL + M G++ ++ T
Sbjct: 127 CGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGV 186
Query: 138 LRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA------------ 185
+ +CA++ L GR I++ + + +AL+D+Y KCG +E A
Sbjct: 187 VSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTM 246
Query: 186 --W--ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
W +LF+ + KDVV WNAMIGG ++ LF M + PD T+ S L A
Sbjct: 247 VSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSA 306
Query: 242 --SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
+G +++ IH I K L + L +LID+YAK G I A Q+++ + + +
Sbjct: 307 CSQLGALDVG--IWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSL 364
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA- 358
+ TA+ISG A N + A F +MI + D+V +L+ C + + GR+ +
Sbjct: 365 TWTAIISGLALHGN-AHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQ 423
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHG 414
+ K+ S + ++D+ ++G + +A M + + + W +L HG
Sbjct: 424 MSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHG 480
>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 184/576 (31%), Positives = 300/576 (52%), Gaps = 52/576 (9%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HA + NG L+ + ++ YAK ++ A+K FD +P+RN +WT +ISG+A+ G
Sbjct: 311 LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGS 370
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
E +F M G NQ+T SS L+ C+ LQ G+ + + + ++ + ++
Sbjct: 371 SEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNS 430
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMM------- 224
+LDLY KC E A LFE + DVVSWN MIG G + S +FR +
Sbjct: 431 ILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSW 490
Query: 225 -------------RQGMKP-----DC--------FTLGSILRASVGGIELMKISQIHDLI 258
R ++ +C F++ IL +S+ +EL + Q+H ++
Sbjct: 491 NTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGR--QLHGMV 548
Query: 259 IKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML----------------KTDIISCT 302
+K G +S + SL+++Y K G + A + R + K I+S
Sbjct: 549 LKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWG 608
Query: 303 ALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK 362
+++SG+ + + ++ F+ M+ + + +D + +++ CAN L GR +HA+ K
Sbjct: 609 SMVSGYVWNGKY-EDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQK 667
Query: 363 YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIEL 422
DA VG++LIDMY+KSG + DA F + + N++ WTS+I+GYA HG G AI L
Sbjct: 668 IGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGL 727
Query: 423 YKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFA 482
+++M ++G++PN+VTFL +L ACSH GL EG F M + Y I P EH + +VDL+
Sbjct: 728 FEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDLYG 787
Query: 483 RRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVV 542
R G L N I + I S+W + L +C ++ N +G+ + L + P YV+
Sbjct: 788 RAGHLTKTKNFIFKNGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVL 847
Query: 543 LSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
LSN+ + WD A + R LM +R ++K PG S++Q
Sbjct: 848 LSNMCASNHRWDEAARVRSLMHQRGVKKQPGQSWIQ 883
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 130/261 (49%), Gaps = 16/261 (6%)
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+L +I ++ V A +GGL GF+ S++ + + Q FTL +
Sbjct: 258 MLASKISQRSV----ATVGGLLFIGFSISSYF-YPPLWLQSCSLYHFTLSN--------- 303
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
+ +H L +K G + L+ +YAK ++ A +L+ + + + + T LIS
Sbjct: 304 SPPPLGTLHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILIS 363
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
GFAR + S+ F+LF++M K + L +L C+ +L LG+ +HA+ +
Sbjct: 364 GFARAGS-SEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGID 422
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
D +GN+++D+Y K A R F+ M + +V+SW +I Y + G +++++++++
Sbjct: 423 VDVVLGNSILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRL 482
Query: 427 KHEGMVPNDVTFLSLLFACSH 447
++ +V + T + L C +
Sbjct: 483 PYKDVVSWN-TIVDGLLQCGY 502
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 82/159 (51%), Gaps = 7/159 (4%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
++D T +++ C + +HA++ G+ + ++ + +I Y+K G + A
Sbjct: 635 VVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAW 694
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
F + E N+V WT+MISGYA +G +A+ +F ML G+ N+ T+ L AC+
Sbjct: 695 MVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAG 754
Query: 146 WLQGG----RMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
++ G RM++ + VE+ ++++DLY + G
Sbjct: 755 LIEEGCRYFRMMKDAYCINPGVEHC---TSMVDLYGRAG 790
>gi|449522252|ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37310-like [Cucumis sativus]
Length = 635
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 179/588 (30%), Positives = 320/588 (54%), Gaps = 35/588 (5%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
++ S Y L+Q C D R +HA ++ + + L +K+I FY+K G + A
Sbjct: 1 MNYSAYGRLIQHCTDHLFFRVGKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNV 60
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG---VRANQFTYSSALRACARM 144
F ++P +N+ SW A+ Y + + L +FS+++ S V+ ++FT + +L+A A +
Sbjct: 61 FGKIPRKNIFSWNALFISYTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCSLKALASL 120
Query: 145 RWLQG-GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
G + + I + ++FV +AL+ Y++C + A I+F+R+ +D VSWNAM
Sbjct: 121 FSNSGLAKEVHSFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMPERDTVSWNAM 180
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQ-GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
+ G + G ++ LFR M+ +KP+ T S+L+A +L ++H + +
Sbjct: 181 LAGYSQGGSYEECKELFRVMLSSVEVKPNALTAVSVLQACAQSNDLTFGIEVHRFVNESQ 240
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGF--------ARD--- 311
++ L ++I +YAK G + A +L+ M + D I+ ++ISG+ A D
Sbjct: 241 IKMDVSLWNAVIGLYAKCGILDYARELFEEMPEKDGITYCSMISGYMVHGFVNQAMDLFR 300
Query: 312 -------------------DNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNL 352
+N + A D+F+ M + V L +L + ++ ++L
Sbjct: 301 EQERPRLPTWNAVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKG 360
Query: 353 GRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAK 412
G++IH +A + + V A+ID YAK G + A FD++ +++I+WTS+I+ YA
Sbjct: 361 GKEIHGYAIRNTYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAV 420
Query: 413 HGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAE 472
HG + A+ L+ +M G+ P+ VTF S+L AC+H+G E W++F ++ +Y I P E
Sbjct: 421 HGDANVALSLFYEMLTNGIQPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVE 480
Query: 473 HFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDM 532
H++C+V + +R G+L A I +M ++PTA +W A+L S+ G+ LG+ LF++
Sbjct: 481 HYACMVGVLSRAGKLSDAVEFISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEI 540
Query: 533 EPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSS 580
EPE + NYV+++N+Y+ +G W +A R LM+E L+K PG S++++S
Sbjct: 541 EPENTGNYVIMANLYSQSGRWKDADTIRDLMKEVRLKKIPGNSWIETS 588
>gi|125559296|gb|EAZ04832.1| hypothetical protein OsI_27010 [Oryza sativa Indica Group]
Length = 700
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 177/559 (31%), Positives = 302/559 (54%), Gaps = 17/559 (3%)
Query: 28 LDPSTYMSLLQFCIDKKAERQA----HLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS 83
+D TY +++ C A Q ++ A I + N+ + ++ +AK G +
Sbjct: 148 VDGFTYPPVIKACAALGAVAQGRKVWEMVEADIASGNARPNVFVQCALVDMFAKCGCLDE 207
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
AR F+ M R++ +WTAMI G +G + +F+ M G + ++ + AC R
Sbjct: 208 ARNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGR 267
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
LQ G + G K +++V +AL+D+Y KCG +E A LF KDVVSW+++
Sbjct: 268 AGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSL 327
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI----SQIHDLII 259
I G + G ++ S LF M+ G+ P+ TL SIL + ++K+ +IH I
Sbjct: 328 IVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPC----LSVLKLIRSGKEIHCFSI 383
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
+ GLE S + +LID+Y+K G IR A ++ L D+ ++++G+A + +S AF
Sbjct: 384 RHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVN-GYSDSAF 442
Query: 320 DLFKDMILKKMGI--DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
+ +L+K+G+ D V + +L +C L G+++HA+ KY + +V NAL+D
Sbjct: 443 CALR--LLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNALLD 500
Query: 378 MYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVT 437
MY K G + A F M ++N +++ LI+ + KH + +A+ + MK +G+ P+ VT
Sbjct: 501 MYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIAPDKVT 560
Query: 438 FLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
F++LL CSH GL +G L+ M++ Y I P EH+SC+VDL++R G+L+ A+ + M
Sbjct: 561 FVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEAWCFMSNM 620
Query: 498 NIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNAR 557
+P + +L AC ++ + EL + +F+ P +++LSNIY AG W +
Sbjct: 621 AEEPEIDVLGGLLAACRVHNRMDIAELVGKRIFEQNPNDPGYHILLSNIYADAGMWSDVT 680
Query: 558 KTRKLMEERSLRKNPGYSF 576
+ R +++ER+L+K G S
Sbjct: 681 RIRTMIQERNLKKETGNSL 699
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 157/562 (27%), Positives = 273/562 (48%), Gaps = 48/562 (8%)
Query: 37 LQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNV 96
LQ C D + R+ +HA ++ G+ L +++ YAK+GDV A + FD MP RN
Sbjct: 58 LQSCPDFQEARR---LHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNS 114
Query: 97 VSWTAMISGYAQNGYDENALLVFSAMLRSG-VRANQFTYSSALRACARMRWLQGGR---- 151
+W A+I G G AL +F M+ G V + FTY ++ACA + + GR
Sbjct: 115 FAWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWE 174
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
M++ I G N+FV+ AL+D++AKCG +++A +FE ++ +D+ +W AMIGG G
Sbjct: 175 MVEADIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSG 234
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
+ LF M +G D +++ A EL + +H +K G ++
Sbjct: 235 NWLEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSN 294
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
+L+D+Y K G + A L+ S D++S ++LI G++++ H+ + LF +MI +
Sbjct: 295 ALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNV-SVSLFCEMISLGIN 353
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
+ L +L + + + G++IH F+ ++ V +ALID+Y+K G I A
Sbjct: 354 PNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETI 413
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLT 451
F DK++ W S++AGYA +GY A + ++ G+ P+ VT +S+L C+ +
Sbjct: 414 FWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHML 473
Query: 452 CEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA--------------------- 490
+G EL +I KY I + ++D++ + G LE A
Sbjct: 474 IQGKELHAYVI-KYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISS 532
Query: 491 -------------YNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL---FDMEP 534
++++++ I P + A+L CS G G ++ +++ P
Sbjct: 533 FGKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISP 592
Query: 535 EKSVNYVVLSNIYTAAGAWDNA 556
EK +Y + ++Y+ G D A
Sbjct: 593 EKE-HYSCIVDLYSRCGKLDEA 613
>gi|115476154|ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|27260973|dbj|BAC45090.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|40253357|dbj|BAD05289.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|215715200|dbj|BAG94951.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 696
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 178/533 (33%), Positives = 298/533 (55%), Gaps = 18/533 (3%)
Query: 57 ITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENAL 116
+ +G +N+ ++ ++ YAK G V AR+ FD MPERN VSW A+I+GY ++G +AL
Sbjct: 120 LKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASAL 179
Query: 117 LVFSAMLRSGVRANQFTYSSALRA-----CARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+F M R G+ ++ T++S L A C M L G + GS L V +A
Sbjct: 180 ELFLEMEREGLAPDEATFASLLTAVEGPSCFLMHQLHGKIVKYGS------ALGLTVLNA 233
Query: 172 LLDLYAKCGWIEDAWILFERI-ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ-GMK 229
+ Y++CG ++D+ +F+ I + +D++SWNAM+G G +D++ F MM++ G+
Sbjct: 234 AITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVH 293
Query: 230 PDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGS---IRS 285
PD ++ SI+ + S G + + IH L+IK LE + +LI +Y +Y +
Sbjct: 294 PDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMED 353
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
AY+ + S++ D +S ++++G+++ S +A F+ M + + D+ L +
Sbjct: 354 AYKCFNSLVLKDTVSWNSMLTGYSQH-GLSADALKFFRCMCSENVRTDEYAFSAALRSSS 412
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
+A L LG+QIH + + V ++LI MY+KSG I DA ++F+E + + W +
Sbjct: 413 ELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNA 472
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
+I GYA+HG L+ +M + +TF+ L+ +CSH GL EG E+ M KY
Sbjct: 473 MIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKY 532
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
+ R EH++C VDL+ R GQL+ A +I M +P A +W +LGAC I+GN L
Sbjct: 533 GVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDV 592
Query: 526 ARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
A +LF EP + YV+LS++Y+ G W + +++M++R L K PG+S+++
Sbjct: 593 ASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSWIE 645
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 147/557 (26%), Positives = 252/557 (45%), Gaps = 62/557 (11%)
Query: 53 HAHIITNGYESNLHLSTKVIIFYAKVGDVLSA-RKAFDRMPERNVVSWTAMISGYAQNGY 111
HA ++ +G + + + + D L+A R+ FD +P R+ VSW A+++ A +G
Sbjct: 14 HASLLKSGVAAPTPWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGA 73
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
A + AM G+ +N F SALR+ A R G +Q K N+F SA
Sbjct: 74 HPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASA 133
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
LLD+YAKCG + DA +F+ + ++ VSWNA+I G G + LF M R+G+ PD
Sbjct: 134 LLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPD 193
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
T S+L A V G + Q+H I+K G + + I Y++ GS++ + +++
Sbjct: 194 EATFASLLTA-VEGPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFD 252
Query: 292 SMLKT-DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI--DDVILCLMLNICANVA 348
+ D+IS A++ + + EA F M +++ G+ D +++ C+
Sbjct: 253 GIGDIRDLISWNAMLGAYTH-NGMDDEAMKFFVRM-MQESGVHPDMYSFTSIISSCSEHG 310
Query: 349 SLN-LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE---IADANRAFDEMGDKNVISWT 404
+ GR IH K V NALI MY + E + DA + F+ + K+ +SW
Sbjct: 311 HDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWN 370
Query: 405 SLIAGYAKHGYGHEAIELYKKM-----------------------------------KHE 429
S++ GY++HG +A++ ++ M H
Sbjct: 371 SMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHS 430
Query: 430 GMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLES 489
G ND SL+F S +G+ + + F + +K +P ++ ++ +A+ GQ E+
Sbjct: 431 GFASNDFVSSSLIFMYSKSGIIDDARKSFEE-ADKSSSVP----WNAMIFGYAQHGQAEN 485
Query: 490 A---YNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDME-----PEKSVNYV 541
+N + Q + ++ +CS G L + + L ME P + +Y
Sbjct: 486 VDILFNEMLQRKAPLDHITFVGLITSCSHAG---LVDEGSEILNTMETKYGVPLRMEHYA 542
Query: 542 VLSNIYTAAGAWDNARK 558
++Y AG D A+K
Sbjct: 543 CGVDLYGRAGQLDKAKK 559
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 82/162 (50%), Gaps = 2/162 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IH +I +G+ SN +S+ +I Y+K G + ARK+F+ + + V W AMI GYAQ+G
Sbjct: 423 IHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQ 482
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
EN ++F+ ML+ + T+ + +C+ + G I +++ V A
Sbjct: 483 AENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYA 542
Query: 172 L-LDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGGLAMQG 211
+DLY + G ++ A L + + D + W ++G + G
Sbjct: 543 CGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHG 584
>gi|118488703|gb|ABK96162.1| unknown [Populus trichocarpa]
Length = 553
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 171/545 (31%), Positives = 291/545 (53%), Gaps = 2/545 (0%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
LQ + + +HA + + +TK++ FYA D+ SAR FD+ P+R+
Sbjct: 9 FLQLSKTHQTLSRTKQLHALVTKTHLLQDPFYATKLVRFYALNNDLSSARNLFDKTPQRS 68
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG 155
V W ++I YAQ ++A L+++ M+ V +++TY+ +RAC ++ G R++ G
Sbjct: 69 VFLWNSIIRAYAQAHKFDDAFLLYTKMIGFDVIPDKYTYACLIRACCEDFYVDGLRIVHG 128
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD 215
+ + SAL+ Y+K G + +A +F + D+V WNAMI G GF D
Sbjct: 129 GVIVSGLGLDSVTCSALVTGYSKMGLVGEASKVFCGVFEPDLVLWNAMISGCGYCGFGDK 188
Query: 216 SFWLFRSMMRQGMK-PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLI 274
F M G K PD +T +++ L IH L +K G + ++ + SL+
Sbjct: 189 GLLFFNEMRDNGNKRPDGYTFVALISGLANSSSLELGQGIHGLCLKSGFDCNDHVGSSLV 248
Query: 275 DVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD 334
+Y+++ I AY ++RS+ + D+++ +ALI+GF++ H K A +K++ L D
Sbjct: 249 SMYSRFSCINLAYSVFRSLCQPDLVTWSALITGFSQAGEHEK-ALLFYKNLNLAGKKPDS 307
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE 394
V++ +L A +A++ G QIH + +Y V +ALIDMY+K G + R F+
Sbjct: 308 VLIASVLVATAQLANVGPGAQIHGYIVRYGFESHVMVSSALIDMYSKCGFVGLGLRVFEN 367
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG 454
M ++N++S+ S+I+G HG +A +++ ++ +G+ P++ TF +LL AC H GL +G
Sbjct: 368 MPNRNIVSYNSIISGLGLHGLASQAFDMFTEIVEKGLKPDESTFSALLCACCHAGLVKDG 427
Query: 455 WELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACS 514
E+F M +++ I R EH+ +V L G+L+ AYN I + + +W A+L C
Sbjct: 428 REIFRRMKDEFWIQARTEHYVHIVKLLGMAGELDEAYNFILSLKQPVDSGIWGALLSCCD 487
Query: 515 IYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGY 574
+G++ L E+ A+ LFD EP+K V+LSN+Y G W + K R + K PG
Sbjct: 488 AHGDSELAEIVAQQLFDGEPKKGAYRVMLSNVYAGDGRWVDVEKMRDYITTAGAEKMPGL 547
Query: 575 SFLQS 579
S + S
Sbjct: 548 SRIGS 552
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 173/333 (51%), Gaps = 2/333 (0%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
D + D TY L++ C + ++H +I +G + + ++ Y+K+G V A
Sbjct: 99 DVIPDKYTYACLIRACCEDFYVDGLRIVHGGVIVSGLGLDSVTCSALVTGYSKMGLVGEA 158
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG-VRANQFTYSSALRACAR 143
K F + E ++V W AMISG G+ + LL F+ M +G R + +T+ + + A
Sbjct: 159 SKVFCGVFEPDLVLWNAMISGCGYCGFGDKGLLFFNEMRDNGNKRPDGYTFVALISGLAN 218
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
L+ G+ I G K F N V S+L+ +Y++ I A+ +F + + D+V+W+A+
Sbjct: 219 SSSLELGQGIHGLCLKSGFDCNDHVGSSLVSMYSRFSCINLAYSVFRSLCQPDLVTWSAL 278
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGL 263
I G + G ++ + ++++ G KPD + S+L A+ + +QIH I++ G
Sbjct: 279 ITGFSQAGEHEKALLFYKNLNLAGKKPDSVLIASVLVATAQLANVGPGAQIHGYIVRYGF 338
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
ES ++ +LID+Y+K G + +++ +M +I+S ++ISG + +AFD+F
Sbjct: 339 ESHVMVSSALIDMYSKCGFVGLGLRVFENMPNRNIVSYNSIISGLGL-HGLASQAFDMFT 397
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQI 356
+++ K + D+ +L C + + GR+I
Sbjct: 398 EIVEKGLKPDESTFSALLCACCHAGLVKDGREI 430
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 88/208 (42%), Gaps = 2/208 (0%)
Query: 339 LMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK 398
L L + +L+ +Q+HA K D L+ YA + +++ A FD+ +
Sbjct: 8 LFLQLSKTHQTLSRTKQLHALVTKTHLLQDPFYATKLVRFYALNNDLSSARNLFDKTPQR 67
Query: 399 NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELF 458
+V W S+I YA+ +A LY KM ++P+ T+ L+ AC +G +
Sbjct: 68 SVFLWNSIIRAYAQAHKFDDAFLLYTKMIGFDVIPDKYTYACLIRACCED-FYVDGLRIV 126
Query: 459 TDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
+ + + S +V +++ G + A + + +P LW+A++ C G
Sbjct: 127 HGGVIVSGLGLDSVTCSALVTGYSKMGLVGEASKVFCGV-FEPDLVLWNAMISGCGYCGF 185
Query: 519 TSLGELAARNLFDMEPEKSVNYVVLSNI 546
G L + D ++ Y ++ I
Sbjct: 186 GDKGLLFFNEMRDNGNKRPDGYTFVALI 213
>gi|449442142|ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Cucumis sativus]
Length = 704
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 182/554 (32%), Positives = 301/554 (54%), Gaps = 4/554 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD T+ S+L+ +H+ II GY N++ + ++ YAK + A +
Sbjct: 97 LDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYLS 156
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F + + N VSW AMI+GYAQ G E A + M + G + + TY+ L +
Sbjct: 157 FLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLLPLLDDADFC 216
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER-KDVVSWNAMIGG 206
+ G I K + +AL+ Y+KCG ++DA +F+ +D+V+WN+++
Sbjct: 217 NLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAA 276
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
++ D +F L M G +PD ++ SI+ A +H L+IK G E S
Sbjct: 277 YLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQS 336
Query: 267 NKLTGSLIDVYAK--YGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
++ +LI +Y K YGS++ A ++ S+ D +S ++++G ++ + S++A F
Sbjct: 337 VPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGS-SEDAVKSFLH 395
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M M ID +L C+++A+ LG+QIH A KY + V ++LI MY+K G
Sbjct: 396 MRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGI 455
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
I DA R+F+E + I+W +L+ GYA+HG + A++L+ M+ + + + +TF+++L A
Sbjct: 456 IEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLMEEKKVKMDHITFVAVLTA 515
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
CSH GL +G + M + Y + PR EH++C VDL+ R G+LE A +I +M KP +
Sbjct: 516 CSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTT 575
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
+W LGAC GN L A +L +MEPE+ YV+LSN+Y WD K ++LM+
Sbjct: 576 VWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLSNMYGNLMRWDEKAKVKRLMK 635
Query: 565 ERSLRKNPGYSFLQ 578
ER ++K PG+S+++
Sbjct: 636 ERGVKKVPGWSWIE 649
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 143/506 (28%), Positives = 247/506 (48%), Gaps = 16/506 (3%)
Query: 51 LIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
L H+ + G ++++ ++ Y K ++ SA FD MP R+ VSW MI+G+ G
Sbjct: 19 LNHSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCG 78
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
E + V M G +++T+ S L+ A G+ + I K + EN++ S
Sbjct: 79 NLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGS 138
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
ALLD+YAKC +EDA++ F I + + VSWNAMI G A G + +FWL M ++G K
Sbjct: 139 ALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKV 198
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
D T +L SQ+H IIK GLE N + +LI Y+K GS+ A +++
Sbjct: 199 DDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIF 258
Query: 291 RSMLKT-DIISCTALISGFARDDNHSKE--AFDLFKDMILKKMGIDDVILCLMLNICANV 347
S D+++ +L++ + S+E AF L DM D +++ C N
Sbjct: 259 DSSAGIRDLVTWNSLLAAYLL---RSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNE 315
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS--GEIADANRAFDEMGDKNVISWTS 405
N GR +H K + NALI MY KS G + +A F+ + K+ +SW S
Sbjct: 316 NISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNS 375
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
++ G ++ G +A++ + M+ M + +F ++L +CS G ++ + KY
Sbjct: 376 ILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHV-LALKY 434
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
+ S ++ ++++ G +E A + + K ++ W+A++ + +G ++
Sbjct: 435 GLESNEFVSSSLIFMYSKCGIIEDARRSFEEAS-KNSSITWNALMFGYAQHGQCNV---- 489
Query: 526 ARNLFDMEPEKSV--NYVVLSNIYTA 549
A +LF + EK V +++ + TA
Sbjct: 490 ALDLFFLMEEKKVKMDHITFVAVLTA 515
>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 163/466 (34%), Positives = 271/466 (58%), Gaps = 2/466 (0%)
Query: 114 NALLVFSAM-LRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSAL 172
+AL +F L G TY + + AC ++ ++G + + + F + ++++ +
Sbjct: 114 DALEMFEIFELEDGFHVGYSTYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRNRV 173
Query: 173 LDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDC 232
L ++ KCG + DA LF+ + ++ VSW +I G G ++F LF M +
Sbjct: 174 LLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGP 233
Query: 233 FTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRS 292
T +++RAS G + Q+H IK GL ++ +LID+Y+K GS+ A+ ++
Sbjct: 234 RTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDE 293
Query: 293 MLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNL 352
M I+ ++I+G+A +S+EA DL+ +M + +D +++ IC+ +AS+
Sbjct: 294 MPDKTIVGWNSIIAGYALH-GYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVAR 352
Query: 353 GRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAK 412
+Q+HA + D AL+D Y+K G++ DA FD M +N+ISW +LIAGY
Sbjct: 353 AKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGN 412
Query: 413 HGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAE 472
HG+G EAI++++KM EGM+PN VTFL++L ACS +GL GWE+F M +++ PRA
Sbjct: 413 HGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRAM 472
Query: 473 HFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDM 532
HF+C+++L R G L+ AY +IR+ +PTA++W+A+L AC ++GN LG+ AA L+ M
Sbjct: 473 HFACMIELLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLYGM 532
Query: 533 EPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
EPEK NY+VL NIY ++G A + ++ + LR P S+++
Sbjct: 533 EPEKLSNYIVLLNIYNSSGKLKEAADVFQTLKRKGLRMLPACSWIE 578
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 224/445 (50%), Gaps = 11/445 (2%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
STY +L+ CI K+ R + +++ NG+E + ++ +V++ + K G ++ A + FD
Sbjct: 133 STYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMMIDACRLFDE 192
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
MP RN VSW +ISGY +G A +F M T+++ +RA A + + G
Sbjct: 193 MPARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRASAGLEIIFPG 252
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
R + K +++FV AL+D+Y+KCG +EDA +F+ + K +V WN++I G A+
Sbjct: 253 RQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYALH 312
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
G+++++ L+ M G+K D FT I+R + + Q+H +++ G
Sbjct: 313 GYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVAN 372
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
+L+D Y+K+G + A ++ M +IIS ALI+G+ + H +EA D+F+ M+ + M
Sbjct: 373 TALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYG-NHGHGEEAIDMFEKMLREGM 431
Query: 331 GIDDVILCLMLNICANVASLNLGRQI-HAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ V +L+ C+ G +I + ++ A +I++ + G + +A
Sbjct: 432 MPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRAMHFACMIELLGREGLLDEAY 491
Query: 390 RAFDEMGDKNVIS-WTSLIAGYAKHGYGHEAIEL--YKKMKHEGMVPNDVT-FLSLLFAC 445
+ + + W +L+ HG +EL + K GM P ++ ++ LL
Sbjct: 492 ALIRKAPFQPTANMWAALLRACRVHG----NLELGKFAAEKLYGMEPEKLSNYIVLLNIY 547
Query: 446 SHTGLTCEGWELFTDMINK-YRILP 469
+ +G E ++F + K R+LP
Sbjct: 548 NSSGKLKEAADVFQTLKRKGLRMLP 572
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 109/206 (52%), Gaps = 4/206 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D T+ +++ C + +A +HA ++ NG+ ++ +T ++ FY+K G V AR
Sbjct: 332 MDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHV 391
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FDRM RN++SW A+I+GY +G+ E A+ +F MLR G+ N T+ + L AC+
Sbjct: 392 FDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLF 451
Query: 148 QGGRMIQGSIQKGRFVENLFVKSA-LLDLYAKCGWIEDAWILFERIERKDVVS-WNAMIG 205
+ G I S+ + V+ + A +++L + G +++A+ L + + + W A++
Sbjct: 452 ERGWEIFQSMTRDHKVKPRAMHFACMIELLGREGLLDEAYALIRKAPFQPTANMWAALLR 511
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPD 231
+ G + F + GM+P+
Sbjct: 512 ACRVHG--NLELGKFAAEKLYGMEPE 535
>gi|297741017|emb|CBI31329.3| unnamed protein product [Vitis vinifera]
Length = 753
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 188/577 (32%), Positives = 312/577 (54%), Gaps = 27/577 (4%)
Query: 8 FKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHL 67
FKT L + L S + D ++ P + SLL C D K+ + +H HII+ G+E + L
Sbjct: 81 FKTVSLIR-LHASSASQDLIVHPIS--SLLSSCTDVKSLAEGRQLHGHIISLGFEQHPIL 137
Query: 68 STKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV 127
K++ FY+ ++ A + + W +IS Y +NG+ + AL + M++ G+
Sbjct: 138 VPKLVTFYSAFNLLVDAHVITENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGI 197
Query: 128 RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWI 187
R + FTY S L+AC L G+ + SI LYA G +A+
Sbjct: 198 RPDNFTYPSVLKACGEELDLGFGKEVHESINA--------------SLYASMGMWNEAFE 243
Query: 188 LFERIERKDV----VSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-- 241
LF + +D+ + WN + GG G + L M + G D L L A
Sbjct: 244 LFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVALIIGLGACS 303
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC 301
+G +L K +IH I+ + + +LI +Y++ ++ AY L++ M +I+
Sbjct: 304 HIGDAKLGK--EIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLLFQLMEAKSLITW 361
Query: 302 TALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF 361
++ISG D S+EA L ++M+L + + V + +L +CA VA+L G++ H +
Sbjct: 362 NSIISGCCHMDR-SEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQHGKEFHCYMT 420
Query: 362 KYQSSYDAAV-GNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
+ + D + NAL+DMYA+SG++ +A R FD +G+++ +++TS+IAGY G G A+
Sbjct: 421 RREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAAL 480
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDL 480
+L+++M + + P+ +T +++L ACSH+GL +G LF M + Y + P EHF+C+ DL
Sbjct: 481 KLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDL 540
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNY 540
F R G L A +IR M KPT ++W+ ++GAC I+ NT +GE AA L +M+PE Y
Sbjct: 541 FGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYY 600
Query: 541 VVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
V+++N+Y AAG W+ K R M + +RK PG +++
Sbjct: 601 VLIANMYAAAGCWNKLAKVRIFMRDLGVRKAPGCAWV 637
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 190/567 (33%), Positives = 305/567 (53%), Gaps = 52/567 (9%)
Query: 41 IDKKAERQAHLIHAHIITNGYESNLHLSTKVIIF-----------------YAKVGDVLS 83
D+ ER L+ +++ GY N +L +F YA+ G V
Sbjct: 118 FDEMPERD--LVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDD 175
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
AR FDRMPE+N VSW A++S Y QN E A ++F + R N A
Sbjct: 176 ARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKS------RENW----------AL 219
Query: 144 MRW--LQGGRMIQGSIQKGR-FVENLFVK-----SALLDLYAKCGWIEDAWILFERIERK 195
+ W L GG + + I + R F +++ V+ + ++ YA+ G I++A LF+ +
Sbjct: 220 VSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ 279
Query: 196 DVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIH 255
DV +W AM+ G +++ LF M + + + ++L V G + ++
Sbjct: 280 DVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELF 335
Query: 256 DLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHS 315
D++ + + N ++I YA+ G I A L+ M K D +S A+I+G+++ HS
Sbjct: 336 DVMPCRNVSTWN----TMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQS-GHS 390
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNAL 375
EA LF M + ++ L+ CA+V +L LG+Q+H K VGNAL
Sbjct: 391 FEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNAL 450
Query: 376 IDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND 435
+ MY K G I +AN F EM K+++SW ++IAGY++HG+G A+ ++ MK EG+ P+D
Sbjct: 451 LLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDD 510
Query: 436 VTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIR 495
T +++L ACSHTGL +G + F M Y ++P ++H++C+VDL R G LE A+N+++
Sbjct: 511 ATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMK 570
Query: 496 QMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDN 555
M +P A++W +LGA ++GNT L E AA +F MEPE S YV+LSN+Y ++G W +
Sbjct: 571 NMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGD 630
Query: 556 ARKTRKLMEERSLRKNPGYSFLQSSKK 582
K R M ++ ++K PGYS+++ K
Sbjct: 631 VGKLRVRMRDKGVKKVPGYSWIEIQNK 657
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 118/469 (25%), Positives = 219/469 (46%), Gaps = 40/469 (8%)
Query: 72 IIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQ 131
I Y + G A + F RMP + VS+ MISGY +NG E A +F M +
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL---- 126
Query: 132 FTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER 191
+++ ++ R R L R + + + ++ + +L YA+ G ++DA +F+R
Sbjct: 127 VSWNVMIKGYVRNRNLGKARELFEIMPE----RDVCSWNTMLSGYAQNGCVDDARSVFDR 182
Query: 192 IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI 251
+ K+ VSWNA++ +++ LF+S + LG ++ ++++
Sbjct: 183 MPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKK----KIVEA 238
Query: 252 SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD 311
Q D + + S N ++I YA+ G I A QL+ D+ + TA++SG+ +
Sbjct: 239 RQFFDSMNVRDVVSWN----TIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQ- 293
Query: 312 DNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAV 371
+ +EA +LF M + ++V ML + + +++ F + +
Sbjct: 294 NRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKEL----FDVMPCRNVST 345
Query: 372 GNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGM 431
N +I YA+ G+I++A FD+M ++ +SW ++IAGY++ G+ EA+ L+ +M+ EG
Sbjct: 346 WNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGG 405
Query: 432 VPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD-----LFARRGQ 486
N +F S L C+ G +L R++ C V ++ + G
Sbjct: 406 RLNRSSFSSALSTCADVVALELGKQLHG------RLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPE 535
+E A ++ ++M K S W+ ++ S +G GE+A R M+ E
Sbjct: 460 IEEANDLFKEMAGKDIVS-WNTMIAGYSRHG---FGEVALRFFESMKRE 504
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 2/186 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L+ S++ S L C D A +H ++ GYE+ + +++ Y K G + A
Sbjct: 407 LNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDL 466
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F M +++VSW MI+GY+++G+ E AL F +M R G++ + T + L AC+ +
Sbjct: 467 FKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLV 526
Query: 148 QGGRM-IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIG 205
GR Q + N + ++DL + G +EDA L + + D W ++G
Sbjct: 527 DKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLG 586
Query: 206 GLAMQG 211
+ G
Sbjct: 587 ASRVHG 592
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 97/236 (41%), Gaps = 40/236 (16%)
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
FK + + N +I Y ++GE A + FDEM +++++SW +I GY ++ +A
Sbjct: 87 FKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKAR 146
Query: 421 ELYKKMKHEGMV---------------------------PNDVTFLSLLFACSHTGLTCE 453
EL++ M + NDV++ +LL A E
Sbjct: 147 ELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEE 206
Query: 454 GWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGAC 513
LF N + ++C++ F ++ ++ A MN++ S W+ I
Sbjct: 207 ACMLFKSRENWALV-----SWNCLLGGFVKKKKIVEARQFFDSMNVRDVVS-WNTI---- 256
Query: 514 SIYGNTSLGEL-AARNLFDMEPEKSV-NYVVLSNIYTAAGAWDNARKTRKLMEERS 567
I G G++ AR LFD P + V + + + Y + AR+ M ER+
Sbjct: 257 -ITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERN 311
>gi|356518523|ref|XP_003527928.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g08210-like [Glycine max]
Length = 686
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 174/510 (34%), Positives = 281/510 (55%), Gaps = 5/510 (0%)
Query: 71 VIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
+I+ +AK G + A FD+MPE ++VSW ++I+G A N +AL S M G++ +
Sbjct: 177 LILGHAKQGLMRDAFNLFDQMPEPDLVSWNSIIAGLADNA-SPHALQFLSMMHGKGLKLD 235
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE 190
FT+ AL+AC + L GR I I K + + S+L+D+Y+ C +++A +F+
Sbjct: 236 AFTFPCALKACGLLGELTMGRQIHCCIIKSGLECSCYCISSLIDMYSNCKLLDEAMKIFD 295
Query: 191 RIER--KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIEL 248
+ + + WN+M+ G G + + M G + D +T L+ + L
Sbjct: 296 KNSPLAESLAVWNSMLSGYVANGDWWRALGMIACMHHSGAQFDSYTFSIALKVCIYFDNL 355
Query: 249 MKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGF 308
SQ+H LII G E + + LID+YAK G+I SA +L+ + D+++ ++LI G
Sbjct: 356 RLASQVHGLIITRGYELDHVVGSILIDLYAKQGNINSALRLFERLPNKDVVAWSSLIVGC 415
Query: 309 ARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYD 368
AR F LF DM+ + ID +L ++L + +++ASL G+QIH+F K +
Sbjct: 416 ARL-GLGTLVFSLFMDMVHLDLEIDHFVLSIVLKVSSSLASLQSGKQIHSFCLKKGYESE 474
Query: 369 AAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKH 428
+ AL DMYAK GEI DA FD + + + +SWT +I G A++G +AI + KM
Sbjct: 475 RVITTALTDMYAKCGEIEDALALFDCLYEIDTMSWTGIIVGCAQNGRADKAISILHKMIE 534
Query: 429 EGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLE 488
G PN +T L +L AC H GL E W +F + ++ + P EH++C+VD+FA+ G+ +
Sbjct: 535 SGTKPNKITILGVLTACRHAGLVEEAWTIFKSIETEHGLTPCPEHYNCMVDIFAKAGRFK 594
Query: 489 SAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYT 548
A N+I M KP ++W ++L AC Y N L + A +L PE + Y++LSN+Y
Sbjct: 595 EARNLINDMPFKPDKTIWCSLLDACGTYKNRHLANIVAEHLLATSPEDASVYIMLSNVYA 654
Query: 549 AAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+ G WDN K R+ + + + K G S+++
Sbjct: 655 SLGMWDNLSKVREAVRKVGI-KGAGKSWIE 683
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 153/518 (29%), Positives = 242/518 (46%), Gaps = 44/518 (8%)
Query: 37 LQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNV 96
L+ C +A + A +H+ II G +++ L +I YAK AR FD MP RN+
Sbjct: 10 LRCCGRFQAIKHAKSLHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDARTLFDEMPHRNI 69
Query: 97 VSWTAMISGYAQNGYDENALLVFSAMLRS-GVRANQFTYSSALRACARMRWLQGGRMIQG 155
VS+T M+S + +G AL +++ ML S V+ NQF YS+ L+AC + ++ G ++
Sbjct: 70 VSFTTMVSAFTNSGRPHEALTLYNHMLESKTVQPNQFLYSAVLKACGLVGDVELGMLVHQ 129
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD 215
+ + R + + +ALLD+Y KCG + DA +F I K+ SWN +I G A QG D
Sbjct: 130 HVSEARLEFDTVLMNALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNTLILGHAKQGLMRD 189
Query: 216 SFWLFR-----------------------------SMMR-QGMKPDCFTLGSILRASVGG 245
+F LF SMM +G+K D FT L+A
Sbjct: 190 AFNLFDQMPEPDLVSWNSIIAGLADNASPHALQFLSMMHGKGLKLDAFTFPCALKACGLL 249
Query: 246 IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY--RSMLKTDIISCTA 303
EL QIH IIK GLE S SLID+Y+ + A +++ S L + +
Sbjct: 250 GELTMGRQIHCCIIKSGLECSCYCISSLIDMYSNCKLLDEAMKIFDKNSPLAESLAVWNS 309
Query: 304 LISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY 363
++SG+ + + + A + M D + L +C +L L Q+H
Sbjct: 310 MLSGYVANGDWWR-ALGMIACMHHSGAQFDSYTFSIALKVCIYFDNLRLASQVHGLIITR 368
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELY 423
D VG+ LID+YAK G I A R F+ + +K+V++W+SLI G A+ G G L+
Sbjct: 369 GYELDHVVGSILIDLYAKQGNINSALRLFERLPNKDVVAWSSLIVGCARLGLGTLVFSLF 428
Query: 424 KKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK----YRILPRAEHFSCVVD 479
M H + + +L S G ++ + + K R++ A + D
Sbjct: 429 MDMVHLDLEIDHFVLSIVLKVSSSLASLQSGKQIHSFCLKKGYESERVITTA-----LTD 483
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
++A+ G++E A + + T S W+ I+ C+ G
Sbjct: 484 MYAKCGEIEDALALFDCLYEIDTMS-WTGIIVGCAQNG 520
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 184/398 (46%), Gaps = 9/398 (2%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD T+ L+ C IH II +G E + + + +I Y+ + A K
Sbjct: 234 LDAFTFPCALKACGLLGELTMGRQIHCCIIKSGLECSCYCISSLIDMYSNCKLLDEAMKI 293
Query: 88 FDRMPE--RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
FD+ ++ W +M+SGY NG AL + + M SG + + +T+S AL+ C
Sbjct: 294 FDKNSPLAESLAVWNSMLSGYVANGDWWRALGMIACMHHSGAQFDSYTFSIALKVCIYFD 353
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
L+ + G I + + V S L+DLYAK G I A LFER+ KDVV+W+++I
Sbjct: 354 NLRLASQVHGLIITRGYELDHVVGSILIDLYAKQGNINSALRLFERLPNKDVVAWSSLIV 413
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
G A G F LF M+ ++ D F L +L+ S L QIH +K G ES
Sbjct: 414 GCARLGLGTLVFSLFMDMVHLDLEIDHFVLSIVLKVSSSLASLQSGKQIHSFCLKKGYES 473
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+T +L D+YAK G I A L+ + + D +S T +I G A++ K A + M
Sbjct: 474 ERVITTALTDMYAKCGEIEDALALFDCLYEIDTMSWTGIIVGCAQNGRADK-AISILHKM 532
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQI-HAFAFKYQSSYDAAVGNALIDMYAKSGE 384
I + + + +L C + + I + ++ + N ++D++AK+G
Sbjct: 533 IESGTKPNKITILGVLTACRHAGLVEEAWTIFKSIETEHGLTPCPEHYNCMVDIFAKAGR 592
Query: 385 IADANRAFDEM---GDKNVISWTSLIAGYAKHGYGHEA 419
+A ++M DK + W SL+ + H A
Sbjct: 593 FKEARNLINDMPFKPDKTI--WCSLLDACGTYKNRHLA 628
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/458 (24%), Positives = 202/458 (44%), Gaps = 72/458 (15%)
Query: 137 ALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKD 196
ALR C R + ++ + + I K ++F+ ++++ +YAKC +DA LF+ + ++
Sbjct: 9 ALRCCGRFQAIKHAKSLHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDARTLFDEMPHRN 68
Query: 197 VVSWNAMIGGLAMQGFNDDSFWLFRSMMR-QGMKPDCFTLGSILRAS--VGGIELMKISQ 253
+VS+ M+ G ++ L+ M+ + ++P+ F ++L+A VG +EL +
Sbjct: 69 IVSFTTMVSAFTNSGRPHEALTLYNHMLESKTVQPNQFLYSAVLKACGLVGDVELGML-- 126
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGS------------------------------- 282
+H + + LE L +L+D+Y K GS
Sbjct: 127 VHQHVSEARLEFDTVLMNALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNTLILGHAKQGL 186
Query: 283 IRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLN 342
+R A+ L+ M + D++S ++I+G A DN S A M K + +D L
Sbjct: 187 MRDAFNLFDQMPEPDLVSWNSIIAGLA--DNASPHALQFLSMMHGKGLKLDAFTFPCALK 244
Query: 343 ICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD--KNV 400
C + L +GRQIH K ++LIDMY+ + +A + FD+ +++
Sbjct: 245 ACGLLGELTMGRQIHCCIIKSGLECSCYCISSLIDMYSNCKLLDEAMKIFDKNSPLAESL 304
Query: 401 ISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC-----------SHTG 449
W S+++GY +G A+ + M H G + TF L C H
Sbjct: 305 AVWNSMLSGYVANGDWWRALGMIACMHHSGAQFDSYTFSIALKVCIYFDNLRLASQVHGL 364
Query: 450 LTCEGWELFTDMINKYRILPRAEHF--SCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
+ G+EL +H S ++DL+A++G + SA + ++ K + WS
Sbjct: 365 IITRGYEL--------------DHVVGSILIDLYAKQGNINSALRLFERLPNKDVVA-WS 409
Query: 508 AILGACSIYGNTSLGELAARNLFDM-EPEKSVNYVVLS 544
+++ C+ G LG L DM + +++ VLS
Sbjct: 410 SLIVGCARLG---LGTLVFSLFMDMVHLDLEIDHFVLS 444
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 13/220 (5%)
Query: 339 LMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK 398
L L C ++ + +H+ K S + N++I +YAK DA FDEM +
Sbjct: 8 LALRCCGRFQAIKHAKSLHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDARTLFDEMPHR 67
Query: 399 NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV-PNDVTFLSLLFACSHTGLTCEGWEL 457
N++S+T++++ + G HEA+ LY M V PN + ++L AC G E L
Sbjct: 68 NIVSFTTMVSAFTNSGRPHEALTLYNHMLESKTVQPNQFLYSAVLKACGLVG-DVELGML 126
Query: 458 FTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
+++ R+ + ++D++ + G L A + ++ K + S W+ + I G
Sbjct: 127 VHQHVSEARLEFDTVLMNALLDMYVKCGSLMDAKRVFHEIPCKNSTS-WNTL-----ILG 180
Query: 518 NTSLGELA-ARNLFDMEPEKSVNYVVLSNIYTAAGAWDNA 556
+ G + A NLFD PE + V ++I AG DNA
Sbjct: 181 HAKQGLMRDAFNLFDQMPEP--DLVSWNSII--AGLADNA 216
>gi|224087027|ref|XP_002308034.1| predicted protein [Populus trichocarpa]
gi|222854010|gb|EEE91557.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 172/551 (31%), Positives = 305/551 (55%), Gaps = 4/551 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+ T + +LQ C D IH +I +G+E N+ + T +I Y++ G+ A K
Sbjct: 8 FNEHTCVVILQACSDIGDVVLGEQIHGFVIKSGFEENVFVGTSLISMYSRSGNFDEAEKV 67
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F+ + +++ MI Y + GY++ A+ VF ++ G+ N +T+++ + C +
Sbjct: 68 FNGVGCKDLRCLNCMILEYGKAGYEKRAIGVFIYLISVGLDPNDYTFTNIISTCN----V 123
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G+ + G K + V +A++ +Y K G +E+A +F + +K+++SW A+I G
Sbjct: 124 EEGKQLHGLAVKYGVLLQTSVGNAVITMYGKNGMVEEAARMFSVMNKKNLISWTALISGY 183
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
G+ + + F + G++ D L +IL L +QIH L+IKLG
Sbjct: 184 TRNGYGEKAVDGFLELRGCGVECDSGLLATILDGCSECKNLDLGTQIHGLVIKLGYPCDI 243
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ +LID+YAK + +SA ++ + S A++ GF +D++ ++ + L
Sbjct: 244 NIGTALIDLYAKCKNFQSARTVFNGLSPRSTASFNAILVGFIENDSNEEDPMVFLSQLRL 303
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ D V +L++ AN ASL GR +HA++ K + +V NALI MYAK G + D
Sbjct: 304 AGIKPDSVSFSRLLSLSANRASLVKGRGLHAYSIKTGFAGHISVSNALITMYAKCGIVED 363
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A +AF+ M + ISW ++I+ Y+ HG G +A+ LY++M+ +G P+++T L +L AC++
Sbjct: 364 AYQAFNSMSANDCISWNAIISAYSLHGQGEKALLLYQEMEEKGFTPDEITILVILQACTY 423
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
+GL+ +G LF M +KY I P EH++C+VDL R G L A ++I + + LW
Sbjct: 424 SGLSEDGLHLFNTMESKYGIQPLLEHYACMVDLLGRAGYLSQAMDIINRSPFSESTLLWR 483
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
++ C + G+ +LG+LA+++L D+ P+++ +YV++SNIY G D A K R M++
Sbjct: 484 TLVNVCKLCGDLNLGKLASKHLLDLSPDEAGSYVLVSNIYAGEGMIDEASKVRTTMKDLK 543
Query: 568 LRKNPGYSFLQ 578
L K G S+++
Sbjct: 544 LSKEAGSSWVE 554
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 201/400 (50%), Gaps = 14/400 (3%)
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
M G + N+ T L+AC+ + + G I G + K F EN+FV ++L+ +Y++ G
Sbjct: 1 MCEFGEKFNEHTCVVILQACSDIGDVVLGEQIHGFVIKSGFEENVFVGTSLISMYSRSGN 60
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
++A +F + KD+ N MI G+ + +F ++ G+ P+ +T +I+
Sbjct: 61 FDEAEKVFNGVGCKDLRCLNCMILEYGKAGYEKRAIGVFIYLISVGLDPNDYTFTNII-- 118
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC 301
S +E K Q+H L +K G+ + ++I +Y K G + A +++ M K ++IS
Sbjct: 119 STCNVEEGK--QLHGLAVKYGVLLQTSVGNAVITMYGKNGMVEEAARMFSVMNKKNLISW 176
Query: 302 TALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF 361
TALISG+ R + + ++A D F ++ + D +L +L+ C+ +L+LG QIH
Sbjct: 177 TALISGYTR-NGYGEKAVDGFLELRGCGVECDSGLLATILDGCSECKNLDLGTQIHGLVI 235
Query: 362 KYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIE 421
K D +G ALID+YAK A F+ + ++ S+ +++ G+ ++ E
Sbjct: 236 KLGYPCDINIGTALIDLYAKCKNFQSARTVFNGLSPRSTASFNAILVGFIENDSNEEDPM 295
Query: 422 LY-KKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFS---CV 477
++ +++ G+ P+ V+F LL ++ +G L I A H S +
Sbjct: 296 VFLSQLRLAGIKPDSVSFSRLLSLSANRASLVKGRGLHAYSIKT----GFAGHISVSNAL 351
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
+ ++A+ G +E AY M+ S W+AI+ A S++G
Sbjct: 352 ITMYAKCGIVEDAYQAFNSMSANDCIS-WNAIISAYSLHG 390
>gi|125561353|gb|EAZ06801.1| hypothetical protein OsI_29045 [Oryza sativa Indica Group]
Length = 696
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 178/533 (33%), Positives = 297/533 (55%), Gaps = 18/533 (3%)
Query: 57 ITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENAL 116
+ +G +N+ ++ ++ YAK G V AR+ FD MPERN VSW A+I+GY ++G +AL
Sbjct: 120 LKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASAL 179
Query: 117 LVFSAMLRSGVRANQFTYSSALRA-----CARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+F M R G+ ++ T++S L A C M L G + GS L V +A
Sbjct: 180 ELFLEMEREGLVPDEATFASLLTAVEGPSCFLMHQLHGKIVKYGS------ALGLTVLNA 233
Query: 172 LLDLYAKCGWIEDAWILFERI-ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ-GMK 229
+ Y++CG ++D+ +F+ I + +D++SWNAM+G G +D++ F MM++ G+
Sbjct: 234 AITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVH 293
Query: 230 PDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGS---IRS 285
PD ++ SI+ + S G + + IH L+IK LE + +LI +Y +Y +
Sbjct: 294 PDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMED 353
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
AY+ + S++ D +S ++++G+++ S +A F+ M + + D+ L +
Sbjct: 354 AYKCFNSLVLKDTVSWNSMLTGYSQH-GLSADALKFFRCMCSENVRTDEYAFSAALRSSS 412
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
+A L LG+QIH + + V ++LI MY+KSG I DA ++F+E + + W +
Sbjct: 413 ELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNA 472
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
+I GYA+HG L+ +M + +TF+ L+ +CSH GL EG E+ M KY
Sbjct: 473 MIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKY 532
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
+ R EH++C VDL+ R GQL+ A +I M +P A +W +LGAC I+GN L
Sbjct: 533 GVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDV 592
Query: 526 ARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
A +LF EP + YV+LS++Y+ G W + +++M++R L K PG+S ++
Sbjct: 593 ASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSLIE 645
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 147/557 (26%), Positives = 254/557 (45%), Gaps = 62/557 (11%)
Query: 53 HAHIITNGYESNLHLSTKVIIFYAKVGDVLSA-RKAFDRMPERNVVSWTAMISGYAQNGY 111
HA ++ +G+ + + + + D L+A R+ FD +P R+ VSW A+++ +A +G
Sbjct: 14 HASLLKSGFAAPTPWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAHAASGA 73
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
A + AM G+ +N F SALR+ A R G +Q K N+F SA
Sbjct: 74 HPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASA 133
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
LLD+YAKCG + DA +F+ + ++ VSWNA+I G G + LF M R+G+ PD
Sbjct: 134 LLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLVPD 193
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
T S+L A V G + Q+H I+K G + + I Y++ GS++ + +++
Sbjct: 194 EATFASLLTA-VEGPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFD 252
Query: 292 SMLKT-DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI--DDVILCLMLNICANVA 348
+ D+IS A++ + + EA F M +++ G+ D +++ C+
Sbjct: 253 GIGDIRDLISWNAMLGAYTH-NGMDDEAMKFFVRM-MQESGVHPDMYSFTSIISSCSEHG 310
Query: 349 SLN-LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE---IADANRAFDEMGDKNVISWT 404
+ GR IH K V NALI MY + E + DA + F+ + K+ +SW
Sbjct: 311 HDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWN 370
Query: 405 SLIAGYAKHGYGHEAIELYKKM-----------------------------------KHE 429
S++ GY++HG +A++ ++ M H
Sbjct: 371 SMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHS 430
Query: 430 GMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLES 489
G ND SL+F S +G+ + + F + +K +P ++ ++ +A+ GQ E+
Sbjct: 431 GFASNDFVSSSLIFMYSKSGIIDDARKSFEE-ADKSSSVP----WNAMIFGYAQHGQAEN 485
Query: 490 A---YNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDME-----PEKSVNYV 541
+N + Q + ++ +CS G L + + L ME P + +Y
Sbjct: 486 VDILFNEMLQRKAPLDHITFVGLITSCSHAG---LVDEGSEILNTMETKYGVPLRMEHYA 542
Query: 542 VLSNIYTAAGAWDNARK 558
++Y AG D A+K
Sbjct: 543 CGVDLYGRAGQLDKAKK 559
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 82/162 (50%), Gaps = 2/162 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IH +I +G+ SN +S+ +I Y+K G + ARK+F+ + + V W AMI GYAQ+G
Sbjct: 423 IHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQ 482
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
EN ++F+ ML+ + T+ + +C+ + G I +++ V A
Sbjct: 483 AENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYA 542
Query: 172 L-LDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGGLAMQG 211
+DLY + G ++ A L + + D + W ++G + G
Sbjct: 543 CGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHG 584
>gi|225217042|gb|ACN85326.1| EMB2261 putative [Oryza brachyantha]
Length = 626
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 179/561 (31%), Positives = 313/561 (55%), Gaps = 7/561 (1%)
Query: 30 PSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS-ARKAF 88
PS+ +SL + R + IHA G ++ +L+ ++ FY ++ L A +AF
Sbjct: 37 PSSPVSLAAVLLRHPPPRLGYCIHARAARGGLLADRYLANALLSFYVRLPRHLPHALRAF 96
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG--VRANQFTYSSALRACARMRW 146
D +P R+VV+ +++++ + + G AL +ML V N +S+A++AC+ +R
Sbjct: 97 DDLPRRDVVAHSSILAAFLRAGMPRRALASLRSMLAEADDVSPNAHAFSAAVKACSVLRD 156
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
G + GSI F ++ V SAL+D+Y DA FE + D + + ++I
Sbjct: 157 RNAGACLHGSILVRGFGDDDIVLSALVDMYGHASAPSDAQKAFEEMRAPDGICYTSLISA 216
Query: 207 LAMQGFNDDSFWLFRSM-MRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
+ +++ FRSM M G++PD T GS++ A + Q H ++ GL
Sbjct: 217 FVRNDWFEEAVRWFRSMLMMNGVRPDGCTFGSMMTALGNLKRENQGRQAHAQVVTRGLCG 276
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ + S +D+YAK GS+ A +++ ML + +S AL+ G+ ++ + K LF++M
Sbjct: 277 NVIVESSTLDMYAKCGSMVEARKVFDRMLVRNEVSWCALLGGYCQNGEYEK-VVALFREM 335
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
KK G D L +L CA ++S+ G++IH + D V +AL+D+YAK G +
Sbjct: 336 D-KKDG-DWYSLGTVLRACAGLSSVKPGKEIHCRFLRMGGWRDVVVESALVDLYAKCGAV 393
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A F+ +N I+W ++I G+A++G+G AI L+ +M EG P+ ++F+S+LFAC
Sbjct: 394 DYAYTVFEASTVRNTITWNAMIGGFAQNGHGERAINLFDRMVREGPRPDYISFVSVLFAC 453
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
SHTG+ +G + F M N Y I P EH++C+VDL +R LE A ++I + + +SL
Sbjct: 454 SHTGMVEQGRKYFNSMSNNYTIAPGIEHYNCMVDLLSRVELLEEAEDLINKSPFRGDSSL 513
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
W+AILGA + + N + E A+ + +++P+ ++YV+L N+Y G W++A + R+LME
Sbjct: 514 WAAILGASATHSNPDVAERVAKKMMELQPQYHLSYVLLENVYRTVGRWEDALEIRRLMES 573
Query: 566 RSLRKNPGYSFLQSSKKNILL 586
R ++K PG S++ +++ + +
Sbjct: 574 RKVKKEPGMSWIDANRSKLCV 594
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 121/213 (56%), Gaps = 2/213 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ S++ + K E Q HA ++T G N+ + + + YAK G ++ ARK F
Sbjct: 242 DGCTFGSMMTALGNLKRENQGRQAHAQVVTRGLCGNVIVESSTLDMYAKCGSMVEARKVF 301
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
DRM RN VSW A++ GY QNG E + +F M + + ++ + LRACA + ++
Sbjct: 302 DRMLVRNEVSWCALLGGYCQNGEYEKVVALFREMDKKD--GDWYSLGTVLRACAGLSSVK 359
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ I + ++ V+SAL+DLYAKCG ++ A+ +FE ++ ++WNAMIGG A
Sbjct: 360 PGKEIHCRFLRMGGWRDVVVESALVDLYAKCGAVDYAYTVFEASTVRNTITWNAMIGGFA 419
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
G + + LF M+R+G +PD + S+L A
Sbjct: 420 QNGHGERAINLFDRMVREGPRPDYISFVSVLFA 452
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 173/512 (33%), Positives = 295/512 (57%), Gaps = 9/512 (1%)
Query: 74 FYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG-VRANQF 132
Y + V ARK FD +P + V W +++G + + A+ F+ M+ G VR +
Sbjct: 158 LYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGS----EAVESFARMVCDGSVRPDAT 213
Query: 133 TYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI 192
T +S L A A + + GR + +K E+ V + L+ LY+KCG +E A LF+ +
Sbjct: 214 TLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMM 273
Query: 193 ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKI 251
E+ D+V++NA+I G ++ G S LF +M G+ P+ TL +++ S G +L+
Sbjct: 274 EKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLA- 332
Query: 252 SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD 311
+H ++K G +++ ++ ++ ++ + + SA + + +M + + S A+ISG+A++
Sbjct: 333 QCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQN 392
Query: 312 DNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAV 371
++ A LF+ M+ + + + + L+ CA + +L+LG+ +H + + V
Sbjct: 393 -GLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYV 451
Query: 372 GNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGM 431
ALIDMYAK G I++A R F+ M +KNV+SW ++IAGY HG G EA++LYK M +
Sbjct: 452 MTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHL 511
Query: 432 VPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAY 491
+P TFLS+L+ACSH GL EGW++F M + Y I P EH +C+VDL R GQL+ A+
Sbjct: 512 LPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLKEAF 571
Query: 492 NMIRQMNIKPTAS-LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAA 550
+I + +W A+LGAC ++ ++ L +LA++ LF+++PE S YV+LSN++T+
Sbjct: 572 ELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSGYYVLLSNLHTSK 631
Query: 551 GAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+ A R+ + R L K PGY+ ++ K
Sbjct: 632 KQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNK 663
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 181/560 (32%), Positives = 297/560 (53%), Gaps = 35/560 (6%)
Query: 52 IHAHIITNGY-ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
I+A + +G + NL +++ Y+K G + + F+++P+R+ V+W +I GY+ +G
Sbjct: 55 IYARRVFDGIPQPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSG 114
Query: 111 YDENALLVFSAMLRS-GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK 169
A+ ++ M++ + T + L+ + + G+ I G + K F L V
Sbjct: 115 LVGAAVKAYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVG 174
Query: 170 SALLDLYAK-------------------------------CGWIEDAWILFERIERKDVV 198
S LLD+Y+K CG IEDA LF +E KD V
Sbjct: 175 SPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGME-KDSV 233
Query: 199 SWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLI 258
SW+AMI GLA G ++ FR M +G+K D + GS+L A G + QIH I
Sbjct: 234 SWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACI 293
Query: 259 IKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEA 318
I+ L+ + +LID+Y K + A ++ M + +++S TA++ G+ + + EA
Sbjct: 294 IRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQ-TGRAGEA 352
Query: 319 FDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDM 378
+F DM + D L ++ CAN++SL G Q H A + V N+L+ +
Sbjct: 353 VKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTL 412
Query: 379 YAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTF 438
Y K G+I D+ R F+EM ++ +SWT++++ YA+ G EAI+L+ KM G+ P+ VT
Sbjct: 413 YGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTL 472
Query: 439 LSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMN 498
++ ACS GL +G F MIN+Y I+P H+SC++DLF+R G++E A I M
Sbjct: 473 TGVISACSRAGLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMP 532
Query: 499 IKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARK 558
+P A W+ +L AC GN +G+ AA +L +++P Y +LS+IY + G WD +
Sbjct: 533 FRPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQ 592
Query: 559 TRKLMEERSLRKNPGYSFLQ 578
R+ M+E+++RK PG S+++
Sbjct: 593 LRRGMKEKNVRKEPGQSWIK 612
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 143/281 (50%), Gaps = 2/281 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D + S+L C A IHA II + ++++ + +I Y K + A+
Sbjct: 265 MDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTV 324
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FDRM ++NVVSWTAM+ GY Q G A+ +F M RSG+ + +T A+ ACA + L
Sbjct: 325 FDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSL 384
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G G + + V ++L+ LY KCG I+D+ LF + +D VSW AM+
Sbjct: 385 EEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAY 444
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLII-KLGLESS 266
A G ++ LF M++ G+KPD TL ++ A + K + +L+I + G+ S
Sbjct: 445 AQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYGIVPS 504
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALIS 306
N +ID++++ G I A M + D I T L+S
Sbjct: 505 NGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLS 545
>gi|125603224|gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
Length = 696
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 178/533 (33%), Positives = 298/533 (55%), Gaps = 18/533 (3%)
Query: 57 ITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENAL 116
+ +G +N+ ++ ++ YAK G V AR+ FD MPERN VSW A+I+GY ++G +AL
Sbjct: 120 LKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASAL 179
Query: 117 LVFSAMLRSGVRANQFTYSSALRA-----CARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+F M R G+ ++ T++S L A C M L G + GS L V +A
Sbjct: 180 ELFLEMEREGLAPDEATFASLLTAVEGPSCFLMHQLHGKIVKYGS------ALGLTVLNA 233
Query: 172 LLDLYAKCGWIEDAWILFERI-ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ-GMK 229
+ Y++CG ++D+ +F+ I + +D++SWNAM+G G +D++ F MM++ G+
Sbjct: 234 AITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVH 293
Query: 230 PDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGS---IRS 285
PD ++ SI+ + S G + + IH L+IK LE + +LI +Y +Y +
Sbjct: 294 PDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMED 353
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
AY+ + S++ D +S ++++G+++ S +A F+ M + + D+ L +
Sbjct: 354 AYKCFNSLVLKDTVSWNSMLTGYSQH-GLSADALKFFRCMCSENVRTDEYAFSAALRSSS 412
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
+A L LG+QIH + + V ++LI MY+KSG I DA ++F+E + + W +
Sbjct: 413 ELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNA 472
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
+I GYA+HG L+ +M + +TF+ L+ +CSH GL EG E+ M KY
Sbjct: 473 MIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKY 532
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
+ R EH++C VDL+ R GQL+ A +I M +P A +W +LGAC I+GN L
Sbjct: 533 GVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDV 592
Query: 526 ARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
A +LF EP + YV+LS++Y+ G W + +++M++R L K PG+S+++
Sbjct: 593 ASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSWIE 645
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 142/526 (26%), Positives = 240/526 (45%), Gaps = 61/526 (11%)
Query: 83 SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA 142
+AR+ FD +P R+ VSW A+++ A +G A + AM G+ +N F SALR+ A
Sbjct: 45 AARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAA 104
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
R G +Q K N+F SALLD+YAKCG + DA +F+ + ++ VSWNA
Sbjct: 105 VARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNA 164
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
+I G G + LF M R+G+ PD T S+L A V G + Q+H I+K G
Sbjct: 165 LIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTA-VEGPSCFLMHQLHGKIVKYG 223
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT-DIISCTALISGFARDDNHSKEAFDL 321
+ + I Y++ GS++ + +++ + D+IS A++ + + EA
Sbjct: 224 SALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTH-NGMDDEAMKF 282
Query: 322 FKDMILKKMGI--DDVILCLMLNICANVASLN-LGRQIHAFAFKYQSSYDAAVGNALIDM 378
F M +++ G+ D +++ C+ + GR IH K V NALI M
Sbjct: 283 FVRM-MQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAM 341
Query: 379 YAKSGE---IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM--------- 426
Y + E + DA + F+ + K+ +SW S++ GY++HG +A++ ++ M
Sbjct: 342 YTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDE 401
Query: 427 --------------------------KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTD 460
H G ND SL+F S +G+ + + F +
Sbjct: 402 YAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEE 461
Query: 461 MINKYRILPRAEHFSCVVDLFARRGQLESA---YNMIRQMNIKPTASLWSAILGACSIYG 517
+K +P ++ ++ +A+ GQ E+ +N + Q + ++ +CS G
Sbjct: 462 -ADKSSSVP----WNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAG 516
Query: 518 NTSLGELAARNLFDME-----PEKSVNYVVLSNIYTAAGAWDNARK 558
L + + L ME P + +Y ++Y AG D A+K
Sbjct: 517 ---LVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKK 559
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 82/162 (50%), Gaps = 2/162 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IH +I +G+ SN +S+ +I Y+K G + ARK+F+ + + V W AMI GYAQ+G
Sbjct: 423 IHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQ 482
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
EN ++F+ ML+ + T+ + +C+ + G I +++ V A
Sbjct: 483 AENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYA 542
Query: 172 L-LDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGGLAMQG 211
+DLY + G ++ A L + + D + W ++G + G
Sbjct: 543 CGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHG 584
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 11/167 (6%)
Query: 373 NALIDMYAKSGE--IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG 430
N L+ Y++S +A A R FDE+ ++ +SW +L+A A G EA L + M +G
Sbjct: 29 NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQG 88
Query: 431 MVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA 490
+ N S L + + G +L + K + S ++D++A+ G++ A
Sbjct: 89 LASNTFALGSALRSAAVARRPAIGAQL-QSLALKSGLANNVFAASALLDVYAKCGRVRDA 147
Query: 491 YNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA-ARNLF-DMEPE 535
+ M + T S W+A+ I G T G++A A LF +ME E
Sbjct: 148 RQVFDGMPERNTVS-WNAL-----IAGYTESGDMASALELFLEMERE 188
>gi|356534091|ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic-like [Glycine max]
Length = 903
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 174/533 (32%), Positives = 287/533 (53%), Gaps = 2/533 (0%)
Query: 51 LIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
++H+ +IT G E NL L T +I YAK + A K + P+ +V WT++ISG+ QN
Sbjct: 240 VLHSQLITFGVEMNLMLKTAIICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQNS 299
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
A+ M SG+ N FTY+S L A + + L+ G + +++V +
Sbjct: 300 QVREAVNALVDMELSGILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVGN 359
Query: 171 ALLDLYAKCGWIEDAWI-LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
AL+D+Y KC + F I +V+SW ++I G A GF ++S LF M G++
Sbjct: 360 ALVDMYMKCSHTTTNGVKAFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAGVQ 419
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
P+ FTL +IL A +++ ++H IIK ++ + +L+D YA G A+ +
Sbjct: 420 PNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAWSV 479
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
M DII+ T L + + +H + A + M ++ +D+ L ++ A +
Sbjct: 480 IGMMNHRDIITYTTLAARLNQQGDH-EMALRVITHMCNDEVKMDEFSLASFISAAAGLGI 538
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
+ G+Q+H ++FK +V N+L+ Y+K G + DA R F ++ + + +SW LI+G
Sbjct: 539 METGKQLHCYSFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDITEPDRVSWNGLISG 598
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
A +G +A+ + M+ G+ P+ VTFLSL+FACS L +G + F M Y I P
Sbjct: 599 LASNGLISDALSAFDDMRLAGVKPDSVTFLSLIFACSQGSLLNQGLDYFYSMEKTYHITP 658
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
+ +H+ C+VDL R G+LE A +I M KP + ++ +L AC+++GN LGE AR
Sbjct: 659 KLDHYVCLVDLLGRGGRLEEAMGVIETMPFKPDSVIYKTLLNACNLHGNVPLGEDMARRC 718
Query: 530 FDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+++P Y++L+++Y AG D KTRKLM ER LR++P +++ K
Sbjct: 719 LELDPCDPAIYLLLASLYDNAGLPDFGDKTRKLMRERGLRRSPRQCWMEVKSK 771
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 153/469 (32%), Positives = 247/469 (52%), Gaps = 5/469 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T + +L C + + ++ +H+ II G + +L+LS ++ YAK V AR FD M
Sbjct: 19 TCLQVLSLC-NSQTLKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEM 77
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P R+VVSWT ++S + +N + AL +F ML SG N+FT SSALR+C+ + + G
Sbjct: 78 PHRDVVSWTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGA 137
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I S+ K N + + L+DLY KC + L ++ DVVSW MI L
Sbjct: 138 KIHASVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETS 197
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSIL-RASVGGIELMKISQIHDLIIKLGLESSNKLT 270
++ L+ M+ G+ P+ FT +L S G+ +H +I G+E + L
Sbjct: 198 KWSEALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNLMLK 257
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
++I +YAK + A ++ + K D+ T++ISGF + ++ +EA + DM L +
Sbjct: 258 TAIICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQ-NSQVREAVNALVDMELSGI 316
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK-SGEIADAN 389
++ +LN ++V SL LG Q H+ D VGNAL+DMY K S +
Sbjct: 317 LPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVGNALVDMYMKCSHTTTNGV 376
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
+AF + NVISWTSLIAG+A+HG+ E+++L+ +M+ G+ PN T ++L ACS
Sbjct: 377 KAFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTILGACSKMK 436
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMN 498
+ +L +I K ++ + +VD +A G + A+++I MN
Sbjct: 437 SIIQTKKLHGYII-KTQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMN 484
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T ++L C K+ Q +H +II + ++ + ++ YA G A M
Sbjct: 424 TLSTILGACSKMKSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIGMM 483
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
R+++++T + + Q G E AL V + M V+ ++F+ +S + A A + ++ G+
Sbjct: 484 NHRDIITYTTLAARLNQQGDHEMALRVITHMCNDEVKMDEFSLASFISAAAGLGIMETGK 543
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ K F V ++L+ Y+KCG + DA+ +F+ I D VSWN +I GLA G
Sbjct: 544 QLHCYSFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDITEPDRVSWNGLISGLASNG 603
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGG 245
D+ F M G+KPD T S++ A G
Sbjct: 604 LISDALSAFDDMRLAGVKPDSVTFLSLIFACSQG 637
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 180/535 (33%), Positives = 294/535 (54%), Gaps = 25/535 (4%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H I G ++++ + ++ Y K G + +AR+ F M +++ V++ AM+ G ++ G
Sbjct: 371 LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGL 430
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRF--VENLFVK 169
AL +F+AM R+G + ++Q S + R V N+FV
Sbjct: 431 HTQALQLFAAMRRAGYSRHPL------------------HLLQYSHSRSRSTSVLNVFVN 472
Query: 170 SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
++LLD Y+KC ++D LF+ + +D VS+N +I A LFR M + G
Sbjct: 473 NSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFD 532
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
++L + ++ QIH ++ LGL S + L +LID+Y+K G + +A
Sbjct: 533 RQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSN 592
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ + + IS TALI+G+ ++ H +EA LF DM + D ++ +++A
Sbjct: 593 FSNRSEKSAISWTALITGYVQNGQH-EEALQLFSDMRRAGLRPDRATFSSIIKASSSLAM 651
Query: 350 LNLGRQIHAFAFKYQSSYDAAV--GNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI 407
+ LGRQ+H++ + S Y ++V G+ L+DMYAK G + +A R FDEM ++N ISW ++I
Sbjct: 652 IGLGRQLHSYLIR--SGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVI 709
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRI 467
+ YA +G AI++++ M H G P+ VTFLS+L ACSH GL E + F M ++Y I
Sbjct: 710 SAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSI 769
Query: 468 LPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAAR 527
P EH++CV+D R G M+ +M K +W++IL +C I+GN L +AA
Sbjct: 770 SPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAAD 829
Query: 528 NLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
LF MEP + YV+LSNIY AG W++A +K+M +R +RK GYS+++ +K
Sbjct: 830 KLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQK 884
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 225/452 (49%), Gaps = 32/452 (7%)
Query: 71 VIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
++ Y+ GD+ +A+ F P RN +WT M+ +A G +AL +F AML GV +
Sbjct: 294 ILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPD 353
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE 190
+ T ++ L + + +I+ G ++FV + LLD Y K G + A +F
Sbjct: 354 RVTVTTVL----NLPGCTVPSLHPFAIKFG-LDTHVFVCNTLLDAYCKHGLLAAARRVFL 408
Query: 191 RIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMK 250
+ KD V++NAM+ G + +G + + LF +M R G L + ++
Sbjct: 409 EMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHPLHLLQYSHSRSRSTSVLN 468
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR 310
+ + SL+D Y+K + +L+ M + D +S +I+ +A
Sbjct: 469 VF----------------VNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAW 512
Query: 311 DDNHSKEAFDLFKDMILKKMGIDDVIL--CLMLNICANVASLNLGRQIHAFAFKYQSSYD 368
+ + LF++M +K+G D +L ML++ ++ +++G+QIHA + +
Sbjct: 513 NQC-AATVLRLFREM--QKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASE 569
Query: 369 AAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKH 428
+GNALIDMY+K G + A F +K+ ISWT+LI GY ++G EA++L+ M+
Sbjct: 570 DLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRR 629
Query: 429 EGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF--SCVVDLFARRGQ 486
G+ P+ TF S++ A S + G +L + +I R ++ F S +VD++A+ G
Sbjct: 630 AGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLI---RSGYKSSVFSGSVLVDMYAKCGC 686
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
L+ A +M + + S W+A++ A + YG
Sbjct: 687 LDEALRTFDEMPERNSIS-WNAVISAYAHYGE 717
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 191/438 (43%), Gaps = 56/438 (12%)
Query: 164 ENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM 223
+N+F + +L Y+ G + A LF ++ +W M+ A G D+ LFR+M
Sbjct: 286 KNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAM 345
Query: 224 MRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
+ +G+ PD T+ ++L + + +H IK GL++ + +L+D Y K+G +
Sbjct: 346 LGEGVIPDRVTVTTVL-----NLPGCTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLL 400
Query: 284 RSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNI 343
+A +++ M D ++ A++ G +++ H+ +A LF M ++ G L L+
Sbjct: 401 AAARRVFLEMHDKDAVTYNAMMMGCSKEGLHT-QALQLFAAM--RRAGYSRHPLHLL--- 454
Query: 344 CANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISW 403
Q + S + V N+L+D Y+K + D R FDEM +++ +S+
Sbjct: 455 -----------QYSHSRSRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSY 503
Query: 404 TSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS-----------HTGLTC 452
+IA YA + + L+++M+ G + + ++L H L
Sbjct: 504 NVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVL 563
Query: 453 EGW-------ELFTDMINKYRILPRAE------------HFSCVVDLFARRGQLESAYNM 493
G DM +K +L A+ ++ ++ + + GQ E A +
Sbjct: 564 LGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQL 623
Query: 494 ---IRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSV-NYVVLSNIYTA 549
+R+ ++P + +S+I+ A S LG L + SV + VL ++Y
Sbjct: 624 FSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAK 683
Query: 550 AGAWDNARKTRKLMEERS 567
G D A +T M ER+
Sbjct: 684 CGCLDEALRTFDEMPERN 701
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 170/520 (32%), Positives = 289/520 (55%), Gaps = 5/520 (0%)
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSA 121
N+ S ++ Y + G V A + FD MPER+V +W AM+SG +N +A+ +
Sbjct: 99 HPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGR 158
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
M+ GV + T SS L C + ++ K LFV +AL+D+Y K G
Sbjct: 159 MVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGM 218
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
+ +A +F + +D+V+WN++I G + LF MM G+ PD TL S+ A
Sbjct: 219 LTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASA 278
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTG-SLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
+ + +H + + G + + + G +++D+YAK I +A +++ ++ D++S
Sbjct: 279 VAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVS 338
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDV--ILCLMLNICANVASLNLGRQIHA 358
LI+G+ ++ + EA ++ DM G+ + +L + + L G ++HA
Sbjct: 339 WNTLITGYMQN-GLANEAIRIYNDM-HNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHA 396
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHE 418
+ K + D V LID+YAK G++ +A F+ M ++ W ++IAG HG+G +
Sbjct: 397 LSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAK 456
Query: 419 AIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVV 478
A+ L+ +M+ E + P+ VTF+SLL ACSH GL +G F M Y I+P A+H++C+V
Sbjct: 457 ALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMV 516
Query: 479 DLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSV 538
D+ R GQL+ A+ I+ M IKP +++W A+LGAC I+GN +G++A++NLF+++PE
Sbjct: 517 DMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVG 576
Query: 539 NYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
YV++SN+Y G WD R L+ ++L+K PG+S ++
Sbjct: 577 YYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSME 616
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 213/442 (48%), Gaps = 10/442 (2%)
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
+R + FT+ +RA ++ +++ G N+F +L+ Y + G + +A+
Sbjct: 65 LRPDSFTFPPLVRAAPGPA--SAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAY 122
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+F+ + +DV +WNAM+ GL D+ L M+ +G+ D TL S+L V
Sbjct: 123 RVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLG 182
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
+ +H +K GL + +LIDVY K G + A+ ++ M D+++ ++IS
Sbjct: 183 DRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIIS 242
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ-S 365
A +LF M+ + D + L + + A + +H + +
Sbjct: 243 A-NEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWD 301
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKK 425
D GNA++DMYAK +I A + FD + D++V+SW +LI GY ++G +EAI +Y
Sbjct: 302 VGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYND 361
Query: 426 M-KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
M HEG+ P TF+S+L A S+ G +G + I K + +C++DL+A+
Sbjct: 362 MHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSI-KTGLNLDVYVTTCLIDLYAKC 420
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGN--TSLGELAARNLFDMEPEKSVNYVV 542
G+L A + M + T W+AI+ ++G+ +L + +++P+ V +V
Sbjct: 421 GKLVEAMFLFEHMPRRSTGP-WNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDH-VTFVS 478
Query: 543 LSNIYTAAGAWDNARKTRKLME 564
L + AG D R LM+
Sbjct: 479 LLAACSHAGLVDQGRSFFDLMQ 500
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 188/395 (47%), Gaps = 15/395 (3%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T S+L C+ A ++H + + +G L + +I Y K+G + A F
Sbjct: 167 DAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVF 226
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
M R++V+W ++IS Q G A+ +F M+ SGV + T S A A+
Sbjct: 227 GGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDEL 286
Query: 149 GGRMIQGSI-QKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G + + + ++G V ++ +A++D+YAK I+ A +F+ + +DVVSWN +I G
Sbjct: 287 GAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGY 346
Query: 208 AMQGFNDDSFWLFRSMM-RQGMKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGLE 264
G +++ ++ M +G+KP T S+L A +GG++ + ++H L IK GL
Sbjct: 347 MQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQ--QGMRMHALSIKTGLN 404
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+T LID+YAK G + A L+ M + A+I+G H +A LF
Sbjct: 405 LDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGV-HGHGAKALSLFSQ 463
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYD----AAVGNALIDMYA 380
M +++ D V +L C++ ++ GR +F Q+ Y A ++DM
Sbjct: 464 MQQEEIKPDHVTFVSLLAACSHAGLVDQGR---SFFDLMQTVYGIVPIAKHYTCMVDMLG 520
Query: 381 KSGEIADANRAFDEMGDK-NVISWTSLIAGYAKHG 414
++G++ +A M K + W +L+ HG
Sbjct: 521 RAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHG 555
>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
Length = 1021
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 175/567 (30%), Positives = 313/567 (55%), Gaps = 6/567 (1%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
D D T++S+L CI+ + +H I NG +++L ++ ++ Y+K+G + A
Sbjct: 420 DLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVA 479
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
+ F +P ++ VSW A+I G A N + A+ + M G+ ++ ++++A+ AC+ +
Sbjct: 480 KALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNI 539
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
++ G+ I + K N V S+L+DLY+K G +E + + ++ +V NA+I
Sbjct: 540 WAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALI 599
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
GL D++ LF+ +++ G KP FT SIL + + Q+H +K +
Sbjct: 600 TGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAIL 659
Query: 265 SSNKLTG-SLIDVYAKYGSIRSAYQLYRSML-KTDIISCTALISGFARDDNHSKEAFDLF 322
+ + G SL+ +Y K + A +L + +++ TA ISG+A++ +S ++ +F
Sbjct: 660 NQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQN-GYSVQSLVMF 718
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ-SSYDAAVGNALIDMYAK 381
M + D+ +L C+ +A+L G++IH K SY+ A +AL+DMY+K
Sbjct: 719 WRMRSYDVRSDEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETAT-SALMDMYSK 777
Query: 382 SGEIADANRAFDEMGDK-NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
G++ + F E+ ++ N++ W S+I G+AK+GY +EA+ L++KM+ + P+DVT L
Sbjct: 778 CGDVISSFEIFKELKNRQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVTLLG 837
Query: 441 LLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIK 500
+L ACSH GL EG F M Y I+PR +H++C++DL R G L+ A +I Q+ +
Sbjct: 838 VLIACSHAGLISEGLHFFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQKAQEVIDQLPFR 897
Query: 501 PTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTR 560
+W+ L AC ++ + G++AA+ L +MEP+ S YV LS+++ AAG W A+ R
Sbjct: 898 ADGVIWATYLAACQMHKDEERGKVAAKKLVEMEPQSSSTYVFLSSLHAAAGNWVEAKVAR 957
Query: 561 KLMEERSLRKNPGYSFLQSSKKNILLL 587
+ M E+ + K PG S++ K + +
Sbjct: 958 EAMREKGVMKFPGCSWITVGNKQSVFV 984
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 230/440 (52%), Gaps = 7/440 (1%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K G++ A + ++CPDT+ + S++ +QA + + + G +
Sbjct: 204 KCGEVDDARRMFDGIACPDTI----CWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQV 259
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+I A +G + AR R+ + V+W A+I+ Y+Q+G D ++ M + G
Sbjct: 260 TCVTIISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQG 319
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
+ + T++S L A A M GR I + K N+FV S+L++LY K G I DA
Sbjct: 320 LMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAK 379
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+F+ K++V WNA++ G +++ +F+ M R ++ D FT S+L A +
Sbjct: 380 KVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLY 439
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
L Q+H + IK G+++ + +++D+Y+K G+I A L+ + D +S ALI
Sbjct: 440 SLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIV 499
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
G A ++ EA ++ K M + +D+V +N C+N+ ++ G+QIH+ + KY
Sbjct: 500 GLAHNEEEG-EAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVC 558
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
+ AVG++LID+Y+K G++ + + + +++ +LI G ++ EAIEL++++
Sbjct: 559 SNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQV 618
Query: 427 KHEGMVPNDVTFLSLLFACS 446
+G P++ TF S+L C+
Sbjct: 619 LKDGFKPSNFTFTSILSGCT 638
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/476 (27%), Positives = 230/476 (48%), Gaps = 37/476 (7%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
+L C A +H ++ +G+ S++ ++ YAK G+V AR+ FD + +
Sbjct: 163 VLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIACPD 222
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG 155
+ WT+MI+GY + G + AL +FS M + G +Q T + + A M
Sbjct: 223 TICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQVTCVTIISTLASM----------- 271
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD 215
G + DA L +RI V+WNA+I + G + +
Sbjct: 272 ------------------------GRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSE 307
Query: 216 SFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLID 275
F L++ M +QG+ P T SIL A+ + QIH +K GL+++ + SLI+
Sbjct: 308 VFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLIN 367
Query: 276 VYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDV 335
+Y K+G I A +++ + +I+ A++ GF +++ +E +F+ M + DD
Sbjct: 368 LYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQ-EETIQMFQYMRRADLEADDF 426
Query: 336 ILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEM 395
+L C N+ SL+LGRQ+H K D V NA++DMY+K G I A F +
Sbjct: 427 TFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLI 486
Query: 396 GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGW 455
K+ +SW +LI G A + EAI + K+MK G+ ++V+F + + ACS+ G
Sbjct: 487 PVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGK 546
Query: 456 ELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
++ + I KY + S ++DL+++ G +ES+ ++ ++ + + I G
Sbjct: 547 QIHSASI-KYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITG 601
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 124/467 (26%), Positives = 216/467 (46%), Gaps = 63/467 (13%)
Query: 3 IVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAH---------- 50
+VRA K + L+F + S L P+TY + L + ++ R AH
Sbjct: 8 LVRAAPKPWPEQHPLRFFPATSKAAGELHPTTYYTTLLASLSREC-RHAHHPFDAGLHRT 66
Query: 51 -------LIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFD--RMPERNVVSWTA 101
++HA I+ G L ++ Y + G V A +A + + ++
Sbjct: 67 HQARACGVLHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASS 126
Query: 102 MISGYAQNGYDENALLVFSAMLRS-GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKG 160
++S +A++G + L F + S G +QF + L AC+R+ L+ GR + + K
Sbjct: 127 VLSCHARSGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKS 186
Query: 161 RFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLF 220
F ++F ++ L+D+YAKCG ++DA +F+ I D + W +MI G G + LF
Sbjct: 187 GFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALF 246
Query: 221 RSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKY 280
M + G PD T +I I A
Sbjct: 247 SRMEKMGSVPDQVTCVTI-----------------------------------ISTLASM 271
Query: 281 GSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDV--ILC 338
G + A L + + T ++ A+I+ +++ S E F L+KDM KK G+
Sbjct: 272 GRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDS-EVFGLYKDM--KKQGLMPTRSTFA 328
Query: 339 LMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK 398
+L+ AN+ + + GRQIHA A K+ + VG++LI++Y K G I+DA + FD +K
Sbjct: 329 SILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEK 388
Query: 399 NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
N++ W +++ G+ ++ E I++++ M+ + +D TF+S+L AC
Sbjct: 389 NIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGAC 435
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 151/353 (42%), Gaps = 61/353 (17%)
Query: 171 ALLDLYAKCGWIEDAWILFE--------RIERKDVVSWNAMIGGLAMQGFND--DSFWLF 220
AL+DLY + G + AW V+S +A G D D+F
Sbjct: 93 ALVDLYGRSGRVGYAWRALACCTGAPASSAAASSVLSCHARSGSP-----RDVLDAFQRI 147
Query: 221 RSMMRQGMKPDCFTLGSILRAS--VGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYA 278
R + G PD F + +L A +G +E + Q+H ++K G SS L+D+YA
Sbjct: 148 RCSI--GSTPDQFGIAVVLSACSRLGALEHGR--QVHCDVLKSGFCSSVFCQAGLVDMYA 203
Query: 279 KYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG-IDDVIL 337
K G + A +++ + D I T++I+G+ R + ++A LF M +KMG + D +
Sbjct: 204 KCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRY-QQALALFSRM--EKMGSVPDQVT 260
Query: 338 CLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD 397
C+ +I A G + DA +
Sbjct: 261 CV----------------------------------TIISTLASMGRLGDARTLLKRIRM 286
Query: 398 KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWEL 457
+ ++W ++IA Y++ G E LYK MK +G++P TF S+L A ++ EG ++
Sbjct: 287 TSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQI 346
Query: 458 FTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
+ K+ + S +++L+ + G + A + + + +W+AIL
Sbjct: 347 HATAV-KHGLDANVFVGSSLINLYVKHGCISDAKKVF-DFSTEKNIVMWNAIL 397
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 356 IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFD--EMGDKNVISWTSLIAGYAKH 413
+HA + +G+AL+D+Y +SG + A RA + + +S+++ +A+
Sbjct: 75 LHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASSVLSCHARS 134
Query: 414 GYGHEAIELYKKMKHE-GMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAE 472
G + ++ +++++ G P+ +L ACS G G ++ D++ K
Sbjct: 135 GSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVL-KSGFCSSVF 193
Query: 473 HFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
+ +VD++A+ G+++ A M + P W++++
Sbjct: 194 CQAGLVDMYAKCGEVDDARRMFDGIAC-PDTICWTSMIAG 232
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 158/468 (33%), Positives = 272/468 (58%), Gaps = 24/468 (5%)
Query: 134 YSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE 193
Y++ L C R + G+ + + K R++ ++F+++ L+ LY KC + DA +F+ +
Sbjct: 246 YNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMP 305
Query: 194 RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGM---------------------KPDC 232
++VVSW AMI + +G+ + LF + ++ + +P+
Sbjct: 306 ERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNE 365
Query: 233 FTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRS 292
FT ++L + + + QIH LIIKL E + SL+D+YAK G I A ++
Sbjct: 366 FTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFEC 425
Query: 293 MLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNL 352
+ + D++SCTA+ISG+A+ +EA +LF+ + + M + V +L + +A+L+L
Sbjct: 426 LPERDVVSCTAIISGYAQL-GLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDL 484
Query: 353 GRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAK 412
G+Q+H + + + N+LIDMY+K G + + R FD M ++ VISW +++ GY+K
Sbjct: 485 GKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSK 544
Query: 413 HGYGHEAIELYKKMKHEGMV-PNDVTFLSLLFACSHTGLTCEGWELFTDMIN-KYRILPR 470
HG G E ++L+ M+ E V P+ VT L++L CSH GL +G +F DM + K + P+
Sbjct: 545 HGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPK 604
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
EH+ CVVDL R G++E A+ I++M +PTA++W ++LGAC ++ N +GE A + L
Sbjct: 605 MEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLL 664
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
++EP + NYV+LSN+Y +AG W++ R LM ++++ K PG S ++
Sbjct: 665 EIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIE 712
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/410 (31%), Positives = 211/410 (51%), Gaps = 34/410 (8%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y ++L C++K+A R+ +HAH+I Y ++ L T++I+ Y K + A FD MP
Sbjct: 246 YNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMP 305
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLR---SGVRA------------------NQ 131
ERNVVSWTAMIS Y+Q GY AL +F A ++ +GV A N+
Sbjct: 306 ERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNE 365
Query: 132 FTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER 191
FT+++ L +C GR I I K + +++FV S+LLD+YAK G I +A +FE
Sbjct: 366 FTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFEC 425
Query: 192 IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI 251
+ +DVVS A+I G A G ++++ LFR + +GMK + T +L A G L
Sbjct: 426 LPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLG 485
Query: 252 SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD 311
Q+H+ +++ + S L SLID+Y+K G++ + +++ +M + +IS A++ G+++
Sbjct: 486 KQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSK- 544
Query: 312 DNHSKEAFDLFKDMILK-KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA 370
+E LF M + K+ D V + +L+ C++ + G I F SS
Sbjct: 545 HGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNI----FNDMSSGKIE 600
Query: 371 VG------NALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKH 413
V ++D+ +SG + +A +M + W SL+ H
Sbjct: 601 VEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVH 650
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 156/285 (54%), Gaps = 10/285 (3%)
Query: 18 KFSLSCPD---TLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVI 72
K LS P+ +P+ T+ ++L C IH+ II YE ++ + + ++
Sbjct: 348 KLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLL 407
Query: 73 IFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQF 132
YAK G + AR F+ +PER+VVS TA+ISGYAQ G DE AL +F + G+++N
Sbjct: 408 DMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYV 467
Query: 133 TYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI 192
TY+ L A + + L G+ + + + + ++++L+D+Y+KCG + + +F+ +
Sbjct: 468 TYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTM 527
Query: 193 ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ--GMKPDCFTLGSILRA-SVGGIELM 249
+ V+SWNAM+ G + G + LF ++MR+ +KPD T+ ++L S GG+E
Sbjct: 528 YERTVISWNAMLVGYSKHGEGREVLKLF-TLMREETKVKPDSVTILAVLSGCSHGGLEDK 586
Query: 250 KISQIHDLII-KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
++ +D+ K+ +E + G ++D+ + G + A++ + M
Sbjct: 587 GLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKM 631
>gi|297804224|ref|XP_002869996.1| putative protein [Arabidopsis lyrata subsp. lyrata]
gi|297315832|gb|EFH46255.1| putative protein [Arabidopsis lyrata subsp. lyrata]
Length = 1251
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 185/537 (34%), Positives = 296/537 (55%), Gaps = 6/537 (1%)
Query: 51 LIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
++H H+I + + S++ + T + + K + A K F+RMP R+ +W AM+SG+ Q+G
Sbjct: 669 MVHTHLIKSPFWSDVFVGTATVDMFVKCDSLDYAAKVFERMPVRDATTWNAMLSGFCQSG 728
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFVK 169
+ + +F M + + T + +++ + + L+ +++ I+ G ++ V
Sbjct: 729 HTDKVFSLFREMRLDEIPPDSVTVMTLIQSASFEKSLKLLKVMHAFGIRLGVDLQAT-VS 787
Query: 170 SALLDLYAKCGWIEDAWILFERIERKD--VVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
+ + Y KCG ++ A ++FE I+R D VVSWN++ A+ G D+F +R M+R
Sbjct: 788 NTWISAYGKCGDLDSAKLVFEAIDRGDRTVVSWNSVFKAFAVFGEAFDAFGHYRLMLRDE 847
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
KPD T ++ + L + IH I LG + + + I +Y+K G SA
Sbjct: 848 FKPDLSTFINLAASCQNPQTLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSGDSCSAR 907
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
L+ M +S T +ISG+A + EA LF M + D V L +++ C
Sbjct: 908 LLFDIMPSRTCVSWTVMISGYAEKGDMD-EALALFHAMAKTGVNPDLVTLLSLISGCGKF 966
Query: 348 ASLNLGRQIHAFAFKYQSSYDAA-VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
SL +G+ I A Y D V NALIDMY+K G I +A FD +K +++WT++
Sbjct: 967 GSLEIGKWIDGRADMYGCKKDNVMVCNALIDMYSKCGSIDEARDIFDNTSEKTMVTWTTM 1026
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYR 466
IAGYA +G EA+EL+ KM PN +TFL++L AC+H+G +GWE F M Y
Sbjct: 1027 IAGYALNGIFLEAMELFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYN 1086
Query: 467 ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAA 526
I P +H+SC+VDL R+G+L+ A +I M+ KP A +W A+L AC I+ N + E AA
Sbjct: 1087 ISPGLDHYSCMVDLLGRKGKLDEALELIHNMSAKPDAGIWGALLSACKIHRNVKIAEQAA 1146
Query: 527 RNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKN 583
+LF++EP+ + YV +SNIY AAG WD + R +M+ +++K PG S +Q + KN
Sbjct: 1147 DSLFNLEPQMAAPYVEMSNIYAAAGMWDGFARIRSMMKLWNIKKYPGESVIQVNGKN 1203
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 208/439 (47%), Gaps = 32/439 (7%)
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
+V +W + +LL+F M R G N FT+ +ACAR+ ++ M+
Sbjct: 612 SVNAWNFQVREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLAYIGYCEMVH 671
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND 214
+ K F ++FV +A +D++ KC ++ A +FER+ +D +WNAM+ G G D
Sbjct: 672 THLIKSPFWSDVFVGTATVDMFVKCDSLDYAAKVFERMPVRDATTWNAMLSGFCQSGHTD 731
Query: 215 DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLI 274
F LFR M + PD T+ ++++++ L + +H I+LG++ ++ + I
Sbjct: 732 KVFSLFREMRLDEIPPDSVTVMTLIQSASFEKSLKLLKVMHAFGIRLGVDLQATVSNTWI 791
Query: 275 DVYAKYGSIRSAYQLYRSMLKTD--IISCTALISGFARDDNHSKEAFDLF---KDMILKK 329
Y K G + SA ++ ++ + D ++S ++ FA EAFD F + M+ +
Sbjct: 792 SAYGKCGDLDSAKLVFEAIDRGDRTVVSWNSVFKAFAV----FGEAFDAFGHYRLMLRDE 847
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
D + C N +L GR IH+ A + D N I MY+KSG+ A
Sbjct: 848 FKPDLSTFINLAASCQNPQTLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSGDSCSAR 907
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
FD M + +SWT +I+GYA+ G EA+ L+ M G+ P+ VT LSL+ C G
Sbjct: 908 LLFDIMPSRTCVSWTVMISGYAEKGDMDEALALFHAMAKTGVNPDLVTLLSLISGCGKFG 967
Query: 450 -LTCEGWELFTDMINKYRILPRAEHFSC----------VVDLFARRGQLESAYNMIRQMN 498
L W I RA+ + C ++D++++ G ++ A ++ +
Sbjct: 968 SLEIGKW-----------IDGRADMYGCKKDNVMVCNALIDMYSKCGSIDEARDIFDNTS 1016
Query: 499 IKPTASLWSAILGACSIYG 517
K T W+ ++ ++ G
Sbjct: 1017 EK-TMVTWTTMIAGYALNG 1034
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 149/288 (51%), Gaps = 15/288 (5%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D ST+++L C + + Q LIH+H I G + ++ I Y+K GD SAR F
Sbjct: 851 DLSTFINLAASCQNPQTLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSGDSCSARLLF 910
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D MP R VSWT MISGYA+ G + AL +F AM ++GV + T S + C + L+
Sbjct: 911 DIMPSRTCVSWTVMISGYAEKGDMDEALALFHAMAKTGVNPDLVTLLSLISGCGKFGSLE 970
Query: 149 GGRMIQGSIQK-GRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ I G G +N+ V +AL+D+Y+KCG I++A +F+ K +V+W MI G
Sbjct: 971 IGKWIDGRADMYGCKKDNVMVCNALIDMYSKCGSIDEARDIFDNTSEKTMVTWTTMIAGY 1030
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMK-------ISQIHDLIIK 260
A+ G ++ LF M+ KP+ T ++L+A L K + Q+++ I
Sbjct: 1031 ALNGIFLEAMELFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYN--IS 1088
Query: 261 LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALISG 307
GL+ + ++D+ + G + A +L +M K D AL+S
Sbjct: 1089 PGLDHYS----CMVDLLGRKGKLDEALELIHNMSAKPDAGIWGALLSA 1132
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 179/372 (48%), Gaps = 15/372 (4%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS 83
PD++ T M+L+Q +K+ + ++HA I G + +S I Y K GD+ S
Sbjct: 747 PDSV----TVMTLIQSASFEKSLKLLKVMHAFGIRLGVDLQATVSNTWISAYGKCGDLDS 802
Query: 84 ARKAFDRMP--ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC 141
A+ F+ + +R VVSW ++ +A G +A + MLR + + T+ + +C
Sbjct: 803 AKLVFEAIDRGDRTVVSWNSVFKAFAVFGEAFDAFGHYRLMLRDEFKPDLSTFINLAASC 862
Query: 142 ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN 201
+ L GR+I +++ + + +Y+K G A +LF+ + + VSW
Sbjct: 863 QNPQTLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSGDSCSARLLFDIMPSRTCVSWT 922
Query: 202 AMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMK-ISQIHDLI 258
MI G A +G D++ LF +M + G+ PD TL S++ G +E+ K I D+
Sbjct: 923 VMISGYAEKGDMDEALALFHAMAKTGVNPDLVTLLSLISGCGKFGSLEIGKWIDGRADM- 981
Query: 259 IKLGLESSNKLT-GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKE 317
G + N + +LID+Y+K GSI A ++ + + +++ T +I+G+A + E
Sbjct: 982 --YGCKKDNVMVCNALIDMYSKCGSIDEARDIFDNTSEKTMVTWTTMIAGYALNGIFL-E 1038
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQ-IHAFAFKYQSSYDAAVGNALI 376
A +LF MI + + +L CA+ SL G + H Y S + ++
Sbjct: 1039 AMELFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMV 1098
Query: 377 DMYAKSGEIADA 388
D+ + G++ +A
Sbjct: 1099 DLLGRKGKLDEA 1110
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 182/548 (33%), Positives = 298/548 (54%), Gaps = 11/548 (2%)
Query: 34 MSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPE 93
+SLL+ C K+ +Q IH +I N +H ++ + + D +A F ++P
Sbjct: 35 LSLLKQCTSTKSLQQ---IHTQMIINA----IHKPNFLLHRFIDLKDFNNASLLFSQIPY 87
Query: 94 RNVVSWTAMISGYAQNGYDENALLVFSAMLRS-GVRANQFTYSSALRACARMRWLQGGRM 152
N ++ MI G N + F ++ G+R N FTY ACA + L G+
Sbjct: 88 PNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQC 147
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF 212
+ K + V+ +L+ +Y++CG + A +F+ I KD+VSWN+MI G + G+
Sbjct: 148 AHSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGY 207
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS 272
D+ LF M G +PD TL SIL A +L S I +++ ++ ++ + +
Sbjct: 208 AGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSA 267
Query: 273 LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI 332
LI +Y K G + SA +++ M+K D+++ A+I+G+A++ S EA LF M +
Sbjct: 268 LIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQN-GVSDEAIILFSGMRESGVNP 326
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAF 392
D + L +L+ CA++ +L+ G+ + +A + D V ALIDMYAK G + DA R F
Sbjct: 327 DKITLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVF 386
Query: 393 DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG--MVPNDVTFLSLLFACSHTGL 450
++M KN +SW ++I+ A HG E++ L+K+M EG + PND++F+ +L AC H GL
Sbjct: 387 EDMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGL 446
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
EG +LF M + + ++P+ EH SC+VDL AR G + A++ I +M KP + A+L
Sbjct: 447 VDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALL 506
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
GAC N + E L +MEP S NY++ S I+ WD++ + R LM +R + K
Sbjct: 507 GACQKRRNVDVSERVMHMLLEMEPLNSGNYIISSKIFANMKRWDDSARMRVLMRQRGVTK 566
Query: 571 NPGYSFLQ 578
PG S+++
Sbjct: 567 TPGCSWIE 574
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 201/376 (53%), Gaps = 16/376 (4%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
TY + C + H+ ++ +G ++ H+ +I Y++ G++ AR+ FD +
Sbjct: 128 TYPFVFIACANLLVLNHGQCAHSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEI 187
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
E+++VSW +MISGY++ GY +A+ +F M +G ++ T S L AC + L G
Sbjct: 188 SEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGS 247
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I+G + + N FV SAL+ +Y KCG + A +F+R+ +KDVV+WNAMI G A G
Sbjct: 248 WIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNG 307
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLESSNKL 269
+D++ LF M G+ PD TL +L AS+G ++ K + + GL++ +
Sbjct: 308 VSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALDFGK--WLDTYASERGLQNDIYV 365
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+ +LID+YAK GS+ A +++ M + + +S A+IS A +E+ LFK M +
Sbjct: 366 STALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISALAF-HGRPQESLSLFKRMSKEG 424
Query: 330 MGI--DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG-----NALIDMYAKS 382
+ +D+ +L+ C + ++ GRQ+ F SS V + ++D+ A++
Sbjct: 425 GAVRPNDISFIGVLSACVHAGLVDEGRQL----FDLMSSSFGLVPKIEHHSCMVDLLARA 480
Query: 383 GEIADANRAFDEMGDK 398
G + +A ++M +K
Sbjct: 481 GHVHEAWDFIEKMPEK 496
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 155/289 (53%), Gaps = 4/289 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T +S+L C D I ++ N + N + + +I Y K GD+ SAR+ F
Sbjct: 226 DEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVF 285
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
DRM +++VV+W AMI+GYAQNG + A+++FS M SGV ++ T L ACA + L
Sbjct: 286 DRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALD 345
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ + + +++V +AL+D+YAKCG ++DA +FE + +K+ VSWNAMI LA
Sbjct: 346 FGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISALA 405
Query: 209 MQGFNDDSFWLFRSMMRQG--MKPDCFTLGSILRASVGGIELMKISQIHDLI-IKLGLES 265
G +S LF+ M ++G ++P+ + +L A V + + Q+ DL+ GL
Sbjct: 406 FHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSSSFGLVP 465
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSML-KTDIISCTALISGFARDDN 313
+ ++D+ A+ G + A+ M K D + AL+ + N
Sbjct: 466 KIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALLGACQKRRN 514
>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 584
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 183/552 (33%), Positives = 293/552 (53%), Gaps = 55/552 (9%)
Query: 34 MSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK------A 87
+S LQ C K+ IHA +I G + ++TK + YA +SAR
Sbjct: 31 LSALQSC---KSTEDLKKIHAQLIITGQIKDTFIATKTVESYA-----VSARNIDYAFWV 82
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F + + SWT MI G+ + E AL + M + GV N+FT+ L+A
Sbjct: 83 FVGINYPDSYSWTTMIRGFVEAKNPEKALEFYGLMRQRGVELNKFTFLFVLKAYGLRPSY 142
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
Q GR++ G + K F ++F ++AL+ +Y KCG I DA +LF+ + +VV+WN MI G
Sbjct: 143 QEGRIVHGKLVKVGFCYDVFTRNALIHMYLKCGSITDAHLLFDEMPNHNVVTWNTMITG- 201
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
CF G RA ++ + + + S N
Sbjct: 202 ------------------------CFGCGDTERAR----------RLFGEMPERNVGSWN 227
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ G Y+K G + A L+ M + D++S ++IS + ++ + EA +LFK+M+L
Sbjct: 228 AVVGG----YSKLGHVDIARSLFDLMPERDVVSWGSMISAYVQN-GRAAEALELFKEMML 282
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ D +I+ +L+ CA + +L++GR IHA+ + + D + AL+DMYAK G I
Sbjct: 283 AGVSADSIIITSILSACAQIGALDMGRWIHAYMKRSKLRNDVFLDTALVDMYAKCGCIDT 342
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A F+ M KN+ SW ++++G A HG+G A+EL+K+M+ G+ PND+TF+++L ACSH
Sbjct: 343 AFGVFNTMPRKNLCSWNAMLSGLAIHGHGFAALELFKQMESTGVGPNDITFVAVLSACSH 402
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
G EGW+ F M ++ I P+ EH+ C+VD+ R+G + A MIR M ++P +W
Sbjct: 403 IGSVEEGWKKFNQMDKEFNITPKVEHYGCMVDILCRQGLINEAKEMIRTMPLEPNVVIWG 462
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
A+L AC ++G T++GE + + E YV+LSNI+ A W+ KTRK+M++
Sbjct: 463 ALLNACKVHGYTNVGEDVVGYIQKLVSEDGGCYVLLSNIFAAKSQWNEVEKTRKMMKQMG 522
Query: 568 LRKN-PGYSFLQ 578
+ K PGYS ++
Sbjct: 523 VEKKIPGYSSIE 534
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 186/409 (45%), Gaps = 49/409 (11%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L+ T++ +L+ + + ++ ++H ++ G+ ++ +I Y K G + A
Sbjct: 124 LNKFTFLFVLKAYGLRPSYQEGRIVHGKLVKVGFCYDVFTRNALIHMYLKCGSITDAHLL 183
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD MP NVV+W MI+G G E A +F M V + W
Sbjct: 184 FDEMPNHNVVTWNTMITGCFGCGDTERARRLFGEMPERNVGS----------------W- 226
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+A++ Y+K G ++ A LF+ + +DVVSW +MI
Sbjct: 227 ----------------------NAVVGGYSKLGHVDIARSLFDLMPERDVVSWGSMISAY 264
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLES 265
G ++ LF+ MM G+ D + SIL A +G +++ + IH + + L +
Sbjct: 265 VQNGRAAEALELFKEMMLAGVSADSIIITSILSACAQIGALDMGR--WIHAYMKRSKLRN 322
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
L +L+D+YAK G I +A+ ++ +M + ++ S A++SG A H A +LFK M
Sbjct: 323 DVFLDTALVDMYAKCGCIDTAFGVFNTMPRKNLCSWNAMLSGLAI-HGHGFAALELFKQM 381
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
+G +D+ +L+ C+++ S+ G ++ + ++ + ++D+ + G
Sbjct: 382 ESTGVGPNDITFVAVLSACSHIGSVEEGWKKFNQMDKEFNITPKVEHYGCMVDILCRQGL 441
Query: 385 IADANRAFDEMG-DKNVISWTSLIAGYAKHGY---GHEAIELYKKMKHE 429
I +A M + NV+ W +L+ HGY G + + +K+ E
Sbjct: 442 INEAKEMIRTMPLEPNVVIWGALLNACKVHGYTNVGEDVVGYIQKLVSE 490
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 178/557 (31%), Positives = 300/557 (53%), Gaps = 4/557 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D +T +++L C ++ +H + + L L+ ++ Y+K G + +A+ F
Sbjct: 41 DVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF 100
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG--VRANQFTYSSALRACARMRW 146
+NVVSW M+ G++ G V ML G V+A++ T +A+ C +
Sbjct: 101 KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESF 160
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
L + + K FV N V +A + YAKCG + A +F I K V SWNA+IGG
Sbjct: 161 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 220
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
A S M G+ PD FT+ S+L A L ++H II+ LE
Sbjct: 221 HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD 280
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ S++ +Y G + + L+ +M ++S +I+G+ ++ A +F+ M+
Sbjct: 281 LFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQN-GFPDRALGVFRQMV 339
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
L + + + + + C+ + SL LGR+ HA+A K+ DA + +LIDMYAK+G I
Sbjct: 340 LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSIT 399
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
+++ F+ + +K+ SW ++I GY HG EAI+L+++M+ G P+D+TFL +L AC+
Sbjct: 400 QSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACN 459
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI-RQMNIKPTASL 505
H+GL EG M + + + P +H++CV+D+ R GQL+ A ++ +M+ + +
Sbjct: 460 HSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGI 519
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
W ++L +C I+ N +GE A LF++EPEK NYV+LSN+Y G W++ RK R+ M E
Sbjct: 520 WKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNE 579
Query: 566 RSLRKNPGYSFLQSSKK 582
SLRK+ G S+++ ++K
Sbjct: 580 MSLRKDAGCSWIELNRK 596
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 215/431 (49%), Gaps = 11/431 (2%)
Query: 94 RNVVSWTAMISGYAQNGYDENALLVFSAMLRS----GVRANQFTYSSALRACARMRWLQG 149
RN VSW +MI ++ NG+ E + L+ M+ + T + L CAR R +
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
G+ + G K R + L + +AL+D+Y+KCG I +A ++F+ K+VVSWN M+GG +
Sbjct: 61 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120
Query: 210 QGFNDDSFWLFRSMMRQG--MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
+G +F + R M+ G +K D T+ + + L + ++H +K +
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 180
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ + + YAK GS+ A +++ + + S ALI G A+ N + + D M +
Sbjct: 181 LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ-SNDPRLSLDAHLQMKI 239
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ D +C +L+ C+ + SL LG+++H F + D V +++ +Y GE+
Sbjct: 240 SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCT 299
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
FD M DK+++SW ++I GY ++G+ A+ ++++M G+ ++ + + ACS
Sbjct: 300 VQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSL 359
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSC-VVDLFARRGQLESAYNMIRQMNIKPTASLW 506
G E + +L +C ++D++A+ G + + + + K TAS W
Sbjct: 360 LPSLRLGREAHAYALK--HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS-W 416
Query: 507 SAILGACSIYG 517
+A++ I+G
Sbjct: 417 NAMIMGYGIHG 427
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 202/432 (46%), Gaps = 21/432 (4%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
D D T ++ + C + +H + + + N ++ + YAK G + A
Sbjct: 140 DVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYA 199
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
++ F + + V SW A+I G+AQ+ +L M SG+ + FT S L AC+++
Sbjct: 200 QRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKL 259
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
+ L+ G+ + G I + +LFV ++L LY CG + LF+ +E K +VSWN +I
Sbjct: 260 KSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVI 319
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G GF D + +FR M+ G++ ++ + A L + H +K LE
Sbjct: 320 TGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLE 379
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ SLID+YAK GSI + +++ + + S A+I G+ +KEA LF++
Sbjct: 380 DDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGI-HGLAKEAIKLFEE 438
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLG-----RQIHAFAFKYQSSYDAAVGNALIDMY 379
M DD+ +L C + ++ G + +F K + A V IDM
Sbjct: 439 MQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACV----IDML 494
Query: 380 AKSGEIADANRAF-DEMGDK-NVISWTSLIAGYAKHGYGHEAIELYKKM-----KHEGMV 432
++G++ A R +EM ++ +V W SL++ H+ +E+ +K+ + E
Sbjct: 495 GRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRI----HQNLEMGEKVAAKLFELEPEK 550
Query: 433 PNDVTFLSLLFA 444
P + LS L+A
Sbjct: 551 PENYVLLSNLYA 562
>gi|15221400|ref|NP_172104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174948|sp|Q9LND4.1|PPR14_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06140, mitochondrial; Flags: Precursor
gi|8810476|gb|AAF80137.1|AC024174_19 Contains similarity to a hypothetical protein F24K9.13 gi|6006885
from Arabidopsis thaliana gb|AC008153 and contains
multiple PPR PF|01535 repeats [Arabidopsis thaliana]
gi|332189825|gb|AEE27946.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 558
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 182/547 (33%), Positives = 300/547 (54%), Gaps = 8/547 (1%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP-- 92
+LL K +HA +I +G+E + L + + Y + + A +F+R+P
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 93 ERNVVSWTAMISGYAQNGYD--ENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+RN SW ++SGY+++ + LL+++ M R + F A++AC + L+ G
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+I G K ++ +V +L+++YA+ G +E A +F+ I ++ V W ++ G
Sbjct: 129 ILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKY 188
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLG-LESSNK 268
+ + F LF M G+ D TL +++A G + K+ + +H + I+ ++ S+
Sbjct: 189 SKDPEVFRLFCLMRDTGLALDALTLICLVKA-CGNVFAGKVGKCVHGVSIRRSFIDQSDY 247
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
L S+ID+Y K + +A +L+ + + +++ T LISGFA+ + + EAFDLF+ M+ +
Sbjct: 248 LQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCE-RAVEAFDLFRQMLRE 306
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ + L +L C+++ SL G+ +H + + DA + IDMYA+ G I A
Sbjct: 307 SILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMA 366
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
FD M ++NVISW+S+I + +G EA++ + KMK + +VPN VTF+SLL ACSH+
Sbjct: 367 RTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHS 426
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
G EGW+ F M Y ++P EH++C+VDL R G++ A + I M +KP AS W A
Sbjct: 427 GNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGA 486
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L AC I+ L A L MEPEKS YV+LSNIY AG W+ R+ M +
Sbjct: 487 LLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGY 546
Query: 569 RKNPGYS 575
RK+ G S
Sbjct: 547 RKHVGQS 553
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 87/180 (48%), Gaps = 2/180 (1%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L + T ++L C + R +H ++I NG E + T I YA+ G++ AR
Sbjct: 309 LPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMART 368
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FD MPERNV+SW++MI+ + NG E AL F M V N T+ S L AC+
Sbjct: 369 VFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGN 428
Query: 147 LQGG-RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS-WNAMI 204
++ G + + + V + ++DL + G I +A + + K + S W A++
Sbjct: 429 VKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALL 488
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 178/557 (31%), Positives = 300/557 (53%), Gaps = 4/557 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D +T +++L C ++ +H + + L L+ ++ Y+K G + +A+ F
Sbjct: 291 DVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF 350
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG--VRANQFTYSSALRACARMRW 146
+NVVSW M+ G++ G V ML G V+A++ T +A+ C +
Sbjct: 351 KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESF 410
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
L + + K FV N V +A + YAKCG + A +F I K V SWNA+IGG
Sbjct: 411 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 470
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
A S M G+ PD FT+ S+L A L ++H II+ LE
Sbjct: 471 HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD 530
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ S++ +Y G + + L+ +M ++S +I+G+ ++ A +F+ M+
Sbjct: 531 LFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQN-GFPDRALGVFRQMV 589
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
L + + + + + C+ + SL LGR+ HA+A K+ DA + +LIDMYAK+G I
Sbjct: 590 LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSIT 649
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
+++ F+ + +K+ SW ++I GY HG EAI+L+++M+ G P+D+TFL +L AC+
Sbjct: 650 QSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACN 709
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI-RQMNIKPTASL 505
H+GL EG M + + + P +H++CV+D+ R GQL+ A ++ +M+ + +
Sbjct: 710 HSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGI 769
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
W ++L +C I+ N +GE A LF++EPEK NYV+LSN+Y G W++ RK R+ M E
Sbjct: 770 WKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNE 829
Query: 566 RSLRKNPGYSFLQSSKK 582
SLRK+ G S+++ ++K
Sbjct: 830 MSLRKDAGCSWIELNRK 846
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 134/504 (26%), Positives = 248/504 (49%), Gaps = 11/504 (2%)
Query: 21 LSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGD 80
+S D L D TY +++ C +H ++ G ++ + ++ FY G
Sbjct: 178 ISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGF 237
Query: 81 VLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS----GVRANQFTYSS 136
V A + FD MPERN+VSW +MI ++ NG+ E + L+ M+ + T +
Sbjct: 238 VTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVT 297
Query: 137 ALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKD 196
L CAR R + G+ + G K R + L + +AL+D+Y+KCG I +A ++F+ K+
Sbjct: 298 VLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKN 357
Query: 197 VVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG--MKPDCFTLGSILRASVGGIELMKISQI 254
VVSWN M+GG + +G +F + R M+ G +K D T+ + + L + ++
Sbjct: 358 VVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKEL 417
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH 314
H +K + + + + YAK GS+ A +++ + + S ALI G A+ N
Sbjct: 418 HCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ-SND 476
Query: 315 SKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNA 374
+ + D M + + D +C +L+ C+ + SL LG+++H F + D V +
Sbjct: 477 PRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLS 536
Query: 375 LIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
++ +Y GE+ FD M DK+++SW ++I GY ++G+ A+ ++++M G+
Sbjct: 537 VLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLC 596
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSC-VVDLFARRGQLESAYNM 493
++ + + ACS G E + +L +C ++D++A+ G + + +
Sbjct: 597 GISMMPVFGACSLLPSLRLGREAHAYALK--HLLEDDAFIACSLIDMYAKNGSITQSSKV 654
Query: 494 IRQMNIKPTASLWSAILGACSIYG 517
+ K TAS W+A++ I+G
Sbjct: 655 FNGLKEKSTAS-WNAMIMGYGIHG 677
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 146/548 (26%), Positives = 257/548 (46%), Gaps = 54/548 (9%)
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS- 125
L T++I YA G +R FD + +N+ W A+IS Y++N + L F M+ +
Sbjct: 122 LCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTT 181
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
+ + FTY ++ACA M + G + G + K VE++FV +AL+ Y G++ DA
Sbjct: 182 DLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDA 241
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ----GMKPDCFTLGSILRA 241
LF+ + +++VSWN+MI + GF+++SF L MM + PD TL ++L
Sbjct: 242 LQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPV 301
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC 301
E+ +H +KL L+ L +L+D+Y+K G I +A +++ +++S
Sbjct: 302 CAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSW 361
Query: 302 TALISGF-ARDDNHSKEAFDLFKDMIL--KKMGIDDVILCLMLNICANVASLNLGRQIHA 358
++ GF A D H FD+ + M+ + + D+V + + +C + + L +++H
Sbjct: 362 NTMVGGFSAEGDTHG--TFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHC 419
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHE 418
++ K + Y+ V NA + YAK G ++ A R F + K V SW +LI G+A+
Sbjct: 420 YSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRL 479
Query: 419 AIELYKKMKHEGMVPNDVTFLSLLFACS-------------------------------- 446
+++ + +MK G++P+ T SLL ACS
Sbjct: 480 SLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLS 539
Query: 447 ---HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM---NIK 500
H G C LF M +K + ++ V+ + + G + A + RQM I+
Sbjct: 540 LYIHCGELCTVQALFDAMEDKSLV-----SWNTVITGYLQNGFPDRALGVFRQMVLYGIQ 594
Query: 501 PTASLWSAILGACSIYGNTSLG-ELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKT 559
+ GACS+ + LG E A L + + + L ++Y G+ + K
Sbjct: 595 LCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKV 654
Query: 560 RKLMEERS 567
++E+S
Sbjct: 655 FNGLKEKS 662
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 202/432 (46%), Gaps = 21/432 (4%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
D D T ++ + C + +H + + + N ++ + YAK G + A
Sbjct: 390 DVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYA 449
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
++ F + + V SW A+I G+AQ+ +L M SG+ + FT S L AC+++
Sbjct: 450 QRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKL 509
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
+ L+ G+ + G I + +LFV ++L LY CG + LF+ +E K +VSWN +I
Sbjct: 510 KSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVI 569
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G GF D + +FR M+ G++ ++ + A L + H +K LE
Sbjct: 570 TGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLE 629
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ SLID+YAK GSI + +++ + + S A+I G+ +KEA LF++
Sbjct: 630 DDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGI-HGLAKEAIKLFEE 688
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLG-----RQIHAFAFKYQSSYDAAVGNALIDMY 379
M DD+ +L C + ++ G + +F K + A V IDM
Sbjct: 689 MQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACV----IDML 744
Query: 380 AKSGEIADANRAF-DEMGDK-NVISWTSLIAGYAKHGYGHEAIELYKKM-----KHEGMV 432
++G++ A R +EM ++ +V W SL++ H+ +E+ +K+ + E
Sbjct: 745 GRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRI----HQNLEMGEKVAAKLFELEPEK 800
Query: 433 PNDVTFLSLLFA 444
P + LS L+A
Sbjct: 801 PENYVLLSNLYA 812
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 13/144 (9%)
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF-AFKY 363
+ F DD S +AF L ++ L L+L + +GR+IH +
Sbjct: 66 VQEFVGDDESSSDAFLLVREA-----------LGLLLQASGKRKDIEMGRKIHQLVSGST 114
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELY 423
+ D + +I MYA G D+ FD + KN+ W ++I+ Y+++ E +E +
Sbjct: 115 RLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETF 174
Query: 424 KKM-KHEGMVPNDVTFLSLLFACS 446
+M ++P+ T+ ++ AC+
Sbjct: 175 IEMISTTDLLPDHFTYPCVIKACA 198
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 172/562 (30%), Positives = 305/562 (54%), Gaps = 4/562 (0%)
Query: 19 FSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKV 78
+ + D + TY+++L C ++ + IH I+ G+E ++ + T +I Y K
Sbjct: 94 YQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKC 153
Query: 79 GDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSAL 138
G V A +F R+ R+VVSWTAMI+ Q+ A ++ M GV N+ T +
Sbjct: 154 GSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVF 213
Query: 139 RACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVV 198
A +L G+ + G + G ++ V ++ ++++ G + DA LFE + +DVV
Sbjct: 214 NAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVV 273
Query: 199 SWNAMIGGLAMQGFN-DDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDL 257
+WN +I L +Q N ++ LF + + G+K + T +L L K IH+L
Sbjct: 274 TWNIVIT-LYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHEL 332
Query: 258 IIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKE 317
+ + G + + +L+ +Y + + A++++ M D+I+ T + +A++ KE
Sbjct: 333 VKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQN-GFRKE 391
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
A LF++M L+ L +L+ CA++A+L GRQIH+ + + + V ALI+
Sbjct: 392 ALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALIN 451
Query: 378 MYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVT 437
MY K G++A+A F++M ++++ W S++ YA+HGY E ++L+ +M+ +G+ + V+
Sbjct: 452 MYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVS 511
Query: 438 FLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
F+S+L A SH+G +G++ F M+ + I P E + CVVDL R G+++ A +++ ++
Sbjct: 512 FVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKL 571
Query: 498 N-IKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNA 556
+ P LW +LGAC + T + AA + + +P S YVVLSN+Y AAG WD
Sbjct: 572 SGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGV 631
Query: 557 RKTRKLMEERSLRKNPGYSFLQ 578
+ RKLM R ++K PG S ++
Sbjct: 632 NRMRKLMRSRGVKKEPGRSSIE 653
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 153/548 (27%), Positives = 287/548 (52%), Gaps = 9/548 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D + +++LLQ C K +H H+ G+E N + +I YA+ G V A++ F
Sbjct: 3 DTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVF 62
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ + ++V +WT MI Y Q G + AL +F M V + TY + L ACA L+
Sbjct: 63 EILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLK 122
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G I G I + F ++FV +AL+++Y KCG + AW F+R+E +DVVSW AMI
Sbjct: 123 DGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACV 182
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
+ WL+R M G+ P+ TL ++ A L + ++ L+ +ES +
Sbjct: 183 QHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVR 242
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ S ++++ G + A +L+ M+ D+++ +I+ + +++N EA LF +
Sbjct: 243 VMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFG-EAVRLFGRLQQD 301
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ +D+ LMLN+ ++ SL G+ IH + DA V AL+ +Y + A
Sbjct: 302 GVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQA 361
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ F +MG K+VI+WT + YA++G+ EA++L+++M+ EG P T +++L C+H
Sbjct: 362 WKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHL 421
Query: 449 GLTCEGWELFTDMI-NKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
+G ++ + +I N++R+ E + +++++ + G++ A ++ +M K +W+
Sbjct: 422 AALQKGRQIHSHIIENRFRMEMVVE--TALINMYGKCGKMAEAMSVFEKM-AKRDILVWN 478
Query: 508 AILGACSIYG--NTSLGELAARNLFDMEPEKSVNYV-VLSNIYTAAGAWDNARKTRKLME 564
++LGA + +G + +L +L + D +V++V VLS + + D + +++
Sbjct: 479 SMLGAYAQHGYYDETL-QLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQ 537
Query: 565 ERSLRKNP 572
+ S+ P
Sbjct: 538 DFSITPTP 545
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 161/341 (47%), Gaps = 10/341 (2%)
Query: 229 KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQ 288
KPD ++L+ + ++H + G E +N + G LI +YA+ GS+ A Q
Sbjct: 1 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 289 LYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
++ + + D+ + T +I + + ++ + A +F M + + V +LN CA+
Sbjct: 61 VFEILERKDVFAWTRMIGIYCQQGDYDR-ALGMFYQMQEEDVMPTKVTYVAILNACASTE 119
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA 408
SL G +IH + D VG ALI+MY K G + A +F + ++V+SWT++IA
Sbjct: 120 SLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA 179
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
+H A LY++M+ +G+VPN +T ++ A EG + +++ +
Sbjct: 180 ACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEG-KFVYGLVSSGVME 238
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIY-GNTSLGE---L 524
+ V++F G L A + M + + W+ ++ ++Y N + GE L
Sbjct: 239 SDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVT-WNIVI---TLYVQNENFGEAVRL 294
Query: 525 AARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
R D + +V++ N+YT+ + + +L++E
Sbjct: 295 FGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKE 335
>gi|449493401|ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g25970-like [Cucumis
sativus]
Length = 704
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 182/554 (32%), Positives = 301/554 (54%), Gaps = 4/554 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD T+ S+L+ +H+ II GY N++ + ++ YAK + A +
Sbjct: 97 LDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYLS 156
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F + + N VSW AMI+GYAQ G E A + M + G + + TY+ L +
Sbjct: 157 FLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLLPLLDDADFC 216
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER-KDVVSWNAMIGG 206
+ G I K + +AL+ Y+KCG ++DA +F+ +D+V+WN+++
Sbjct: 217 NLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAA 276
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
++ D +F L M G +PD ++ SI+ A +H L+IK G E S
Sbjct: 277 YLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQS 336
Query: 267 NKLTGSLIDVYAK--YGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
++ +LI +Y K YGS++ A ++ S+ D +S ++++G ++ + S++A F
Sbjct: 337 VPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGS-SEDAVKSFLH 395
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M M ID +L C+++A+ LG+QIH A KY + V ++LI MY+K G
Sbjct: 396 MRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGI 455
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
I DA R+F+E + I+W +L+ GYA+HG + A++L+ M+ + + + +TF+++L A
Sbjct: 456 IEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLMEXKKVKMDHITFVAVLTA 515
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
CSH GL +G + M + Y + PR EH++C VDL+ R G+LE A +I +M KP +
Sbjct: 516 CSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTT 575
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
+W LGAC GN L A +L +MEPE+ YV+LSN+Y WD K ++LM+
Sbjct: 576 VWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLSNMYGNLMRWDEKAKVKRLMK 635
Query: 565 ERSLRKNPGYSFLQ 578
ER ++K PG+S+++
Sbjct: 636 ERGVKKVPGWSWIE 649
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 142/505 (28%), Positives = 246/505 (48%), Gaps = 14/505 (2%)
Query: 51 LIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
L H+ + G ++++ ++ Y K ++ SA FD MP R+ VSW MI+G+ G
Sbjct: 19 LNHSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCG 78
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
E + V M G +++T+ S L+ A G+ + I K + EN++ S
Sbjct: 79 NLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGS 138
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
ALLD+YAKC +EDA++ F I + + VSWNAMI G A G + +FWL M ++G K
Sbjct: 139 ALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKV 198
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
D T +L SQ+H IIK GLE N + +LI Y+K GS+ A +++
Sbjct: 199 DDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIF 258
Query: 291 RSMLKT-DIISCTALISGFARDDNHSKE--AFDLFKDMILKKMGIDDVILCLMLNICANV 347
S D+++ +L++ + S+E AF L DM D +++ C N
Sbjct: 259 DSSAGIRDLVTWNSLLAAYLL---RSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNE 315
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS--GEIADANRAFDEMGDKNVISWTS 405
N GR +H K + NALI MY KS G + +A F+ + K+ +SW S
Sbjct: 316 NISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNS 375
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
++ G ++ G +A++ + M+ M + +F ++L +CS G ++ + KY
Sbjct: 376 ILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHV-LALKY 434
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
+ S ++ ++++ G +E A + + K ++ W+A++ + +G + +A
Sbjct: 435 GLESNEFVSSSLIFMYSKCGIIEDARRSFEEAS-KNSSITWNALMFGYAQHGQCN---VA 490
Query: 526 ARNLFDMEPEK-SVNYVVLSNIYTA 549
F ME +K ++++ + TA
Sbjct: 491 LDLFFLMEXKKVKMDHITFVAVLTA 515
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 178/557 (31%), Positives = 300/557 (53%), Gaps = 4/557 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D +T +++L C ++ +H + + L L+ ++ Y+K G + +A+ F
Sbjct: 646 DVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF 705
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG--VRANQFTYSSALRACARMRW 146
+NVVSW M+ G++ G V ML G V+A++ T +A+ C +
Sbjct: 706 KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESF 765
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
L + + K FV N V +A + YAKCG + A +F I K V SWNA+IGG
Sbjct: 766 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 825
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
A S M G+ PD FT+ S+L A L ++H II+ LE
Sbjct: 826 HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD 885
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ S++ +Y G + + L+ +M ++S +I+G+ ++ A +F+ M+
Sbjct: 886 LFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQN-GFPDRALGVFRQMV 944
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
L + + + + + C+ + SL LGR+ HA+A K+ DA + +LIDMYAK+G I
Sbjct: 945 LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSIT 1004
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
+++ F+ + +K+ SW ++I GY HG EAI+L+++M+ G P+D+TFL +L AC+
Sbjct: 1005 QSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACN 1064
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI-RQMNIKPTASL 505
H+GL EG M + + + P +H++CV+D+ R GQL+ A ++ +M+ + +
Sbjct: 1065 HSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGI 1124
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
W ++L +C I+ N +GE A LF++EPEK NYV+LSN+Y G W++ RK R+ M E
Sbjct: 1125 WKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNE 1184
Query: 566 RSLRKNPGYSFLQSSKK 582
SLRK+ G S+++ ++K
Sbjct: 1185 MSLRKDAGCSWIELNRK 1201
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/504 (26%), Positives = 248/504 (49%), Gaps = 11/504 (2%)
Query: 21 LSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGD 80
+S D L D TY +++ C +H ++ G ++ + ++ FY G
Sbjct: 533 ISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGF 592
Query: 81 VLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS----GVRANQFTYSS 136
V A + FD MPERN+VSW +MI ++ NG+ E + L+ M+ + T +
Sbjct: 593 VTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVT 652
Query: 137 ALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKD 196
L CAR R + G+ + G K R + L + +AL+D+Y+KCG I +A ++F+ K+
Sbjct: 653 VLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKN 712
Query: 197 VVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG--MKPDCFTLGSILRASVGGIELMKISQI 254
VVSWN M+GG + +G +F + R M+ G +K D T+ + + L + ++
Sbjct: 713 VVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKEL 772
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH 314
H +K + + + + YAK GS+ A +++ + + S ALI G A+ N
Sbjct: 773 HCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ-SND 831
Query: 315 SKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNA 374
+ + D M + + D +C +L+ C+ + SL LG+++H F + D V +
Sbjct: 832 PRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLS 891
Query: 375 LIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
++ +Y GE+ FD M DK+++SW ++I GY ++G+ A+ ++++M G+
Sbjct: 892 VLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLC 951
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSC-VVDLFARRGQLESAYNM 493
++ + + ACS G E + +L +C ++D++A+ G + + +
Sbjct: 952 GISMMPVFGACSLLPSLRLGREAHAYALK--HLLEDDAFIACSLIDMYAKNGSITQSSKV 1009
Query: 494 IRQMNIKPTASLWSAILGACSIYG 517
+ K TAS W+A++ I+G
Sbjct: 1010 FNGLKEKSTAS-WNAMIMGYGIHG 1032
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 146/548 (26%), Positives = 257/548 (46%), Gaps = 54/548 (9%)
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS- 125
L T++I YA G +R FD + +N+ W A+IS Y++N + L F M+ +
Sbjct: 477 LCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTT 536
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
+ + FTY ++ACA M + G + G + K VE++FV +AL+ Y G++ DA
Sbjct: 537 DLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDA 596
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ----GMKPDCFTLGSILRA 241
LF+ + +++VSWN+MI + GF+++SF L MM + PD TL ++L
Sbjct: 597 LQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPV 656
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC 301
E+ +H +KL L+ L +L+D+Y+K G I +A +++ +++S
Sbjct: 657 CAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSW 716
Query: 302 TALISGF-ARDDNHSKEAFDLFKDMIL--KKMGIDDVILCLMLNICANVASLNLGRQIHA 358
++ GF A D H FD+ + M+ + + D+V + + +C + + L +++H
Sbjct: 717 NTMVGGFSAEGDTHG--TFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHC 774
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHE 418
++ K + Y+ V NA + YAK G ++ A R F + K V SW +LI G+A+
Sbjct: 775 YSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRL 834
Query: 419 AIELYKKMKHEGMVPNDVTFLSLLFACS-------------------------------- 446
+++ + +MK G++P+ T SLL ACS
Sbjct: 835 SLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLS 894
Query: 447 ---HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM---NIK 500
H G C LF M +K + ++ V+ + + G + A + RQM I+
Sbjct: 895 LYIHCGELCTVQALFDAMEDKSLV-----SWNTVITGYLQNGFPDRALGVFRQMVLYGIQ 949
Query: 501 PTASLWSAILGACSIYGNTSLG-ELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKT 559
+ GACS+ + LG E A L + + + L ++Y G+ + K
Sbjct: 950 LCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKV 1009
Query: 560 RKLMEERS 567
++E+S
Sbjct: 1010 FNGLKEKS 1017
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 202/432 (46%), Gaps = 21/432 (4%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
D D T ++ + C + +H + + + N ++ + YAK G + A
Sbjct: 745 DVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYA 804
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
++ F + + V SW A+I G+AQ+ +L M SG+ + FT S L AC+++
Sbjct: 805 QRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKL 864
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
+ L+ G+ + G I + +LFV ++L LY CG + LF+ +E K +VSWN +I
Sbjct: 865 KSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVI 924
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G GF D + +FR M+ G++ ++ + A L + H +K LE
Sbjct: 925 TGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLE 984
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ SLID+YAK GSI + +++ + + S A+I G+ +KEA LF++
Sbjct: 985 DDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGI-HGLAKEAIKLFEE 1043
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLG-----RQIHAFAFKYQSSYDAAVGNALIDMY 379
M DD+ +L C + ++ G + +F K + A V IDM
Sbjct: 1044 MQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACV----IDML 1099
Query: 380 AKSGEIADANRAF-DEMGDK-NVISWTSLIAGYAKHGYGHEAIELYKKM-----KHEGMV 432
++G++ A R +EM ++ +V W SL++ H+ +E+ +K+ + E
Sbjct: 1100 GRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRI----HQNLEMGEKVAAKLFELEPEK 1155
Query: 433 PNDVTFLSLLFA 444
P + LS L+A
Sbjct: 1156 PENYVLLSNLYA 1167
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 13/144 (9%)
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF-AFKY 363
+ F DD S +AF L ++ L L+L + +GR+IH +
Sbjct: 421 VQEFVGDDESSSDAFLLVREA-----------LGLLLQASGKRKDIEMGRKIHQLVSGST 469
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELY 423
+ D + +I MYA G D+ FD + KN+ W ++I+ Y+++ E +E +
Sbjct: 470 RLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETF 529
Query: 424 KKM-KHEGMVPNDVTFLSLLFACS 446
+M ++P+ T+ ++ AC+
Sbjct: 530 IEMISTTDLLPDHFTYPCVIKACA 553
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 184/551 (33%), Positives = 291/551 (52%), Gaps = 4/551 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ +L+ C +HAH++ G + + ++ YAK GDV +ARK F
Sbjct: 194 DVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVF 253
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D M + +SW AMI+G+ +N E L +F ML V N T +S A + L
Sbjct: 254 DGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLD 313
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
+ I K F ++ ++L+ +Y+ G + +A +F R+E +D +SW AMI G
Sbjct: 314 FAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYE 373
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
GF D + ++ M + PD T+ S L A L ++H+L G
Sbjct: 374 KNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIV 433
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSK-EAFDLFKDMIL 327
+ +L+++YAK I A ++++ M D+IS +++I+GF NH EA F+ M L
Sbjct: 434 VANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCF--NHKNFEALYYFRHM-L 490
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ + V L CA SL G++IHA + + + V NAL+D+Y K G+
Sbjct: 491 ADVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGY 550
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A F G K+V+SW ++AG+ HG+G A+ + +M G P++VTF++LL CS
Sbjct: 551 AWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSR 610
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
G+ +GWELF M KY I+P +H++C+VDL +R G+L YN I +M I P A++W
Sbjct: 611 AGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWG 670
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
A+L C I+ N LGELAA+ + ++EP + +V+LS++Y AG W K RK M +
Sbjct: 671 ALLNGCRIHRNIELGELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVRKTMRVKG 730
Query: 568 LRKNPGYSFLQ 578
L + G S+++
Sbjct: 731 LEHDYGCSWVE 741
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 160/537 (29%), Positives = 262/537 (48%), Gaps = 12/537 (2%)
Query: 11 GQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTK 70
G+L+QAL S P+ D Y++L C ++A H L L
Sbjct: 76 GELQQALWLLESSPEPP-DEDAYVALFHLCEWRRAAEHGLRACGHADAAHGTFGLRLGNA 134
Query: 71 VIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
++ + G+ A K F +MPER+V SW M+ GY + G+ E AL ++ ML +G R +
Sbjct: 135 MLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPD 194
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE 190
+T+ LR+C + L GR + + + + V +AL+ +YAKCG +E A +F+
Sbjct: 195 VYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFD 254
Query: 191 RIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMK 250
+ D +SWNAMI G + LF M+ ++P+ T+ S+ AS +L
Sbjct: 255 GMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDF 314
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR 310
+IH L +K G + SLI +Y+ G + A ++ M D +S TA+ISG+ +
Sbjct: 315 AKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEK 374
Query: 311 DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA 370
+ K A +++ M + + DDV + L CA++ L++G ++H A
Sbjct: 375 NGFPDK-ALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIV 433
Query: 371 VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG 430
V NAL++MYAKS I A F M DK+VISW+S+IAG+ + EA+ ++ M +
Sbjct: 434 VANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHMLAD- 492
Query: 431 MVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA 490
+ PN VTF++ L AC+ TG G E+ ++ + I + ++DL+ + GQ A
Sbjct: 493 VKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQ-GIASEGYVPNALLDLYVKCGQTGYA 551
Query: 491 YNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDM----EPEKSVNYVVL 543
+ K S W+ +L +G+ G++A +M E V +V L
Sbjct: 552 WAQFGAHGTKDVVS-WNIMLAGFVAHGH---GDIALSFFNEMLETGEHPDEVTFVAL 604
>gi|115473581|ref|NP_001060389.1| Os07g0635800 [Oryza sativa Japonica Group]
gi|22293699|dbj|BAC10044.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113611925|dbj|BAF22303.1| Os07g0635800 [Oryza sativa Japonica Group]
gi|125601219|gb|EAZ40795.1| hypothetical protein OsJ_25273 [Oryza sativa Japonica Group]
Length = 705
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 176/559 (31%), Positives = 301/559 (53%), Gaps = 17/559 (3%)
Query: 28 LDPSTYMSLLQFCIDKKAERQA----HLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS 83
+D TY +++ C A Q ++ I + N+ + ++ +AK G +
Sbjct: 153 VDGFTYPPVIKACAALGAVAQGRKVWEMVETDIASGNARPNVFVQCALVDMFAKCGCLDE 212
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
AR F+ M R++ +WTAMI G +G + +F+ M G + ++ + AC R
Sbjct: 213 ARNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGR 272
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
LQ G + G K +++V +AL+D+Y KCG +E A LF KDVVSW+++
Sbjct: 273 AGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSL 332
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI----SQIHDLII 259
I G + G ++ S LF M+ G+ P+ TL SIL + ++K+ +IH I
Sbjct: 333 IVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPC----LSVLKLIRSGKEIHCFSI 388
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
+ GLE S + +LID+Y+K G IR A ++ L D+ ++++G+A + +S AF
Sbjct: 389 RHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVN-GYSDSAF 447
Query: 320 DLFKDMILKKMGI--DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
+ +L+K+G+ D V + +L +C L G+++HA+ KY + +V NAL+D
Sbjct: 448 CALR--LLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNALLD 505
Query: 378 MYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVT 437
MY K G + A F M ++N +++ LI+ + KH + +A+ + MK +G+ P+ VT
Sbjct: 506 MYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIAPDKVT 565
Query: 438 FLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
F++LL CSH GL +G L+ M++ Y I P EH+SC+VDL++R G+L+ A+ + M
Sbjct: 566 FVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEAWCFMSNM 625
Query: 498 NIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNAR 557
+P + +L AC ++ + EL + +F+ P +++LSNIY AG W +
Sbjct: 626 AEEPEIDVLGGLLAACRVHNRMDIAELVGKRIFEQNPNDPGYHILLSNIYADAGMWSDVT 685
Query: 558 KTRKLMEERSLRKNPGYSF 576
+ R +++ER+L+K G S
Sbjct: 686 RIRTMIQERNLKKETGNSL 704
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 157/562 (27%), Positives = 273/562 (48%), Gaps = 48/562 (8%)
Query: 37 LQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNV 96
LQ C D + R+ +HA ++ G+ L +++ YAK+GDV A + FD MP RN
Sbjct: 63 LQSCPDFQEARR---LHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNS 119
Query: 97 VSWTAMISGYAQNGYDENALLVFSAMLRSG-VRANQFTYSSALRACARMRWLQGGR---- 151
+W A+I G G AL +F M+ G V + FTY ++ACA + + GR
Sbjct: 120 FAWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWE 179
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
M++ I G N+FV+ AL+D++AKCG +++A +FE ++ +D+ +W AMIGG G
Sbjct: 180 MVETDIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSG 239
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
+ LF M +G D +++ A EL + +H +K G ++
Sbjct: 240 NWLEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSN 299
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
+L+D+Y K G + A L+ S D++S ++LI G++++ H+ + LF +MI +
Sbjct: 300 ALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNV-SVSLFCEMISLGIN 358
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
+ L +L + + + G++IH F+ ++ V +ALID+Y+K G I A
Sbjct: 359 PNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETI 418
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLT 451
F DK++ W S++AGYA +GY A + ++ G+ P+ VT +S+L C+ +
Sbjct: 419 FWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHML 478
Query: 452 CEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA--------------------- 490
+G EL +I KY I + ++D++ + G LE A
Sbjct: 479 IQGKELHAYVI-KYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISS 537
Query: 491 -------------YNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL---FDMEP 534
++++++ I P + A+L CS G G ++ +++ P
Sbjct: 538 FGKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISP 597
Query: 535 EKSVNYVVLSNIYTAAGAWDNA 556
EK +Y + ++Y+ G D A
Sbjct: 598 EKE-HYSCIVDLYSRCGKLDEA 618
>gi|356557599|ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
mitochondrial-like [Glycine max]
Length = 601
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 172/545 (31%), Positives = 297/545 (54%), Gaps = 7/545 (1%)
Query: 41 IDKKAERQAHL----IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNV 96
I + Q H +H + G S +S +I Y K DV SAR+ FD MP R+
Sbjct: 58 IKASSSAQCHTFGTQLHCLALKTGSHSETVVSNSIITMYFKFSDVGSARQVFDTMPHRDP 117
Query: 97 VSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG- 155
++W ++I+GY NGY E AL + + G+ +S + C R + GR I
Sbjct: 118 ITWNSLINGYLHNGYLEEALEALNDVYLLGLVPKPELLASVVSMCGRRMGSKIGRQIHAL 177
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD 215
+ R +++F+ +AL+D Y +CG A +F+ +E K+VVSW MI G D+
Sbjct: 178 VVVNERIGQSMFLSTALVDFYFRCGDSLMALRVFDGMEVKNVVSWTTMISGCIAHQDYDE 237
Query: 216 SFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLID 275
+F FR+M +G+ P+ T ++L A + +IH + G ES + +L++
Sbjct: 238 AFACFRAMQAEGVCPNRVTSIALLSACAEPGFVKHGKEIHGYAFRHGFESCPSFSSALVN 297
Query: 276 VYAKYG-SIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD 334
+Y + G + A ++ D++ +++I F+R + S +A LF M +++ +
Sbjct: 298 MYCQCGEPMHLAELIFEGSSFRDVVLWSSIIGSFSRRGD-SFKALKLFNKMRTEEIEPNY 356
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE 394
V L +++ C N++SL G +H + FK+ + +VGNALI+MYAK G + + + F E
Sbjct: 357 VTLLAVISACTNLSSLKHGCGLHGYIFKFGFCFSISVGNALINMYAKCGCLNGSRKMFLE 416
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG 454
M +++ ++W+SLI+ Y HG G +A++++ +M G+ P+ +TFL++L AC+H GL EG
Sbjct: 417 MPNRDNVTWSSLISAYGLHGCGEQALQIFYEMNERGVKPDAITFLAVLSACNHAGLVAEG 476
Query: 455 WELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACS 514
+F + I EH++C+VDL R G+LE A + R M +KP+A +WS+++ AC
Sbjct: 477 QRIFKQVRADCEIPLTIEHYACLVDLLGRSGKLEYALEIRRTMPMKPSARIWSSLVSACK 536
Query: 515 IYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGY 574
++G + E+ A L EP + NY +L+ IY G W + + R+ M+ + L+K G+
Sbjct: 537 LHGRLDIAEMLAPQLIRSEPNNAGNYTLLNTIYAEHGHWLDTEQVREAMKLQKLKKCYGF 596
Query: 575 SFLQS 579
S +++
Sbjct: 597 SRIEA 601
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 136/279 (48%), Gaps = 18/279 (6%)
Query: 23 CPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVL 82
CP+ + T ++LL C + + IH + +G+ES S+ ++ Y + G+ +
Sbjct: 251 CPNRV----TSIALLSACAEPGFVKHGKEIHGYAFRHGFESCPSFSSALVNMYCQCGEPM 306
Query: 83 S-ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC 141
A F+ R+VV W+++I +++ G AL +F+ M + N T + + AC
Sbjct: 307 HLAELIFEGSSFRDVVLWSSIIGSFSRRGDSFKALKLFNKMRTEEIEPNYVTLLAVISAC 366
Query: 142 ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN 201
+ L+ G + G I K F ++ V +AL+++YAKCG + + +F + +D V+W+
Sbjct: 367 TNLSSLKHGCGLHGYIFKFGFCFSISVGNALINMYAKCGCLNGSRKMFLEMPNRDNVTWS 426
Query: 202 AMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS------VGGIELMKISQIH 255
++I + G + + +F M +G+KPD T ++L A G + K Q+
Sbjct: 427 SLISAYGLHGCGEQALQIFYEMNERGVKPDAITFLAVLSACNHAGLVAEGQRIFK--QVR 484
Query: 256 -DLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
D I L +E L+D+ + G + A ++ R+M
Sbjct: 485 ADCEIPLTIEH----YACLVDLLGRSGKLEYALEIRRTM 519
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 94/196 (47%), Gaps = 2/196 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T ++++ C + + + +H +I G+ ++ + +I YAK G + +RK F M
Sbjct: 358 TLLAVISACTNLSSLKHGCGLHGYIFKFGFCFSISVGNALINMYAKCGCLNGSRKMFLEM 417
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P R+ V+W+++IS Y +G E AL +F M GV+ + T+ + L AC + G+
Sbjct: 418 PNRDNVTWSSLISAYGLHGCGEQALQIFYEMNERGVKPDAITFLAVLSACNHAGLVAEGQ 477
Query: 152 MIQGSIQKGRFVE-NLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS-WNAMIGGLAM 209
I ++ + + + L+DL + G +E A + + K W++++ +
Sbjct: 478 RIFKQVRADCEIPLTIEHYACLVDLLGRSGKLEYALEIRRTMPMKPSARIWSSLVSACKL 537
Query: 210 QGFNDDSFWLFRSMMR 225
G D + L ++R
Sbjct: 538 HGRLDIAEMLAPQLIR 553
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 176/528 (33%), Positives = 289/528 (54%), Gaps = 34/528 (6%)
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLR--SGVRANQFTYSSALRACARMR 145
F M +R++VS+ A+I+G++ G A+ V+ A+L+ S VR ++ T S+ + A + +
Sbjct: 95 FASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALG 154
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK--------------------------- 178
G+ I + F N FV S L+D+YAK
Sbjct: 155 DRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMIT 214
Query: 179 ----CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFT 234
C +E+A LFE + +D ++W M+ G G ++ +FR M QG+ D +T
Sbjct: 215 GLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYT 274
Query: 235 LGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML 294
GSIL A L + QIH II+ + + + +L+D+Y+K SI+ A ++R M
Sbjct: 275 FGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMT 334
Query: 295 KTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGR 354
+IIS TALI G+ ++ S+EA +F +M + DD L +++ CAN+ASL G
Sbjct: 335 CKNIISWTALIVGYGQN-GCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGA 393
Query: 355 QIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG 414
Q H A + V NAL+ +Y K G I DA+R FDEM + +SWT+L++GYA+ G
Sbjct: 394 QFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFG 453
Query: 415 YGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF 474
E I+L++KM +G+ P+ VTF+ +L ACS G +G F M + I+P +H+
Sbjct: 454 RAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHY 513
Query: 475 SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEP 534
+C++DL++R G+L+ A I+QM + P A W +L AC + G+ +G+ AA NL +++P
Sbjct: 514 TCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDP 573
Query: 535 EKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+ +YV+L +++ A G W+ + R+ M +R ++K PG S+++ K
Sbjct: 574 QNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCSWIKYKNK 621
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 203/390 (52%), Gaps = 34/390 (8%)
Query: 53 HAHIITNGYESNLHLSTKVIIFYAK---VGD----------------------------V 81
H I+ G+ +N + + ++ YAK VGD V
Sbjct: 163 HCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMV 222
Query: 82 LSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC 141
AR+ F+ M +R+ ++WT M++G+ QNG + AL +F M G+ +Q+T+ S L AC
Sbjct: 223 EEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTAC 282
Query: 142 ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN 201
+ L+ G+ I I + R+ +N+FV SAL+D+Y+KC I+ A +F R+ K+++SW
Sbjct: 283 GALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWT 342
Query: 202 AMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKL 261
A+I G G ++++ +F M R G+ PD +TLGS++ + L + +Q H L +
Sbjct: 343 ALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVS 402
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDL 321
GL ++ +L+ +Y K GSI A++L+ M D +S TAL+SG+A+ +KE DL
Sbjct: 403 GLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQ-FGRAKETIDL 461
Query: 322 FKDMILKKMGIDDVILCLMLNICANVASLNLGRQ-IHAFAFKYQSSYDAAVGNALIDMYA 380
F+ M+ K + D V +L+ C+ + GR H+ + +ID+Y+
Sbjct: 462 FEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYS 521
Query: 381 KSGEIADANRAFDEMG-DKNVISWTSLIAG 409
+SG++ +A +M + I W +L++
Sbjct: 522 RSGKLKEAEEFIKQMPMHPDAIGWGTLLSA 551
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 143/282 (50%), Gaps = 2/282 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D T+ S+L C A Q IHA+II Y+ N+ + + ++ Y+K + A
Sbjct: 270 IDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETV 329
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F RM +N++SWTA+I GY QNG E A+ VFS M R G+ + +T S + +CA + L
Sbjct: 330 FRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASL 389
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G + + V +AL+ LY KCG IEDA LF+ + D VSW A++ G
Sbjct: 390 EEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGY 449
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESS 266
A G ++ LF M+ +G+KPD T +L A S G S H + G+
Sbjct: 450 AQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPI 509
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALISG 307
+ +ID+Y++ G ++ A + + M + D I L+S
Sbjct: 510 DDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSA 551
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 193/390 (49%), Gaps = 44/390 (11%)
Query: 165 NLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMM 224
NLF +ALL A + D LF + ++D+VS+NA+I G + G + + ++ +++
Sbjct: 71 NLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALL 130
Query: 225 R--QGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAK--- 279
+ ++P T+ +++ A+ + Q H I++LG ++ + L+D+YAK
Sbjct: 131 QADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSL 190
Query: 280 ------------------YGS----------IRSAYQLYRSMLKTDIISCTALISGFARD 311
Y + + A +L+ M D I+ T +++GF ++
Sbjct: 191 VGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQN 250
Query: 312 DNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAV 371
S EA ++F+ M + + ID +L C +++L G+QIHA+ + + + V
Sbjct: 251 GLES-EALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFV 309
Query: 372 GNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGM 431
G+AL+DMY+K I A F M KN+ISWT+LI GY ++G EA+ ++ +M+ +G+
Sbjct: 310 GSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGI 369
Query: 432 VPNDVTFLSLLFACSHTGLTCEGWEL----FTDMINKYRILPRAEHFSCVVDLFARRGQL 487
P+D T S++ +C++ EG + + Y + A +V L+ + G +
Sbjct: 370 DPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNA-----LVTLYGKCGSI 424
Query: 488 ESAYNMIRQMNIKPTASLWSAILGACSIYG 517
E A+ + +M+ S W+A++ + +G
Sbjct: 425 EDAHRLFDEMSFHDQVS-WTALVSGYAQFG 453
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 188/591 (31%), Positives = 314/591 (53%), Gaps = 52/591 (8%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS-ARKA 87
D S + S+L + ++ ++ G+ES++ + T ++ Y + L A K
Sbjct: 222 DQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKF 281
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA--NQFTYSSALRACARMR 145
FD M ERN +W+ MI+ + G + A+ V+ R V++ +Q + L C
Sbjct: 282 FDGMVERNEYTWSTMIAALSHGGRIDAAIAVYG---RDPVKSIPSQTALLTGLARC---- 334
Query: 146 WLQGGRMIQGSIQKGRFVENLFVK-SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
GR+ + I + + + V +A++ Y + G +++A LF+R+ ++ +SW MI
Sbjct: 335 ----GRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMI 390
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLG 262
G A G ++++ L +++ R GM P +L S A +G +E + Q+H L +K G
Sbjct: 391 AGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGR--QVHSLAVKAG 448
Query: 263 LESSNKLTGSLIDVYAK----------YGSIR---------------------SAYQLYR 291
+ ++ + +LI +Y K + +R A ++
Sbjct: 449 CQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFD 508
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
+ML D++S T +IS +A+ + EA + FK M+ + + IL ++L++C + S
Sbjct: 509 NMLSRDVVSWTTIISAYAQAER-GDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAK 567
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
LG+QIH A K+ + V NAL+ MY K G AD+++ FD M ++++ +W + I G A
Sbjct: 568 LGQQIHTVAIKHGMDSELIVANALMSMYFKCG-CADSHKVFDSMEERDIFTWNTFITGCA 626
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
+HG G EAI++Y+ M+ G++PN+VTF+ LL ACSH GL EGW+ F M Y + P
Sbjct: 627 QHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLL 686
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
EH++C+VDL R G ++ A I M I+P +WSA+LGAC I+ N +G AA LF
Sbjct: 687 EHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFT 746
Query: 532 MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
EP + NYV+LSNIY++ G W + RK+M++R + K PG S++Q K
Sbjct: 747 TEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWMQIRNK 797
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 134/517 (25%), Positives = 229/517 (44%), Gaps = 70/517 (13%)
Query: 64 NLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML 123
N+ +T ++ YA++G VL AR+ FD MPERN V+W AM+S Y QNG A +F AM
Sbjct: 94 NVRTATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMP 153
Query: 124 RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIE 183
V + W M+ G + V
Sbjct: 154 SRDVTS----------------W---NSMVTGYCHSRQMV-------------------- 174
Query: 184 DAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV 243
DAW LF+++ ++++V+W MI G + + +FR M +G PD S+L A
Sbjct: 175 DAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVT 234
Query: 244 GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGS-IRSAYQLYRSMLKTDIISCT 302
G +L + + L++K G ES + S+++VY + S + A + + M++ + + +
Sbjct: 235 GLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWS 294
Query: 303 ALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN----LGRQIHA 358
+I+ + D + G D V +I + A L GR A
Sbjct: 295 TMIAALSHGGR---------IDAAIAVYGRDPV-----KSIPSQTALLTGLARCGRITEA 340
Query: 359 FAFKYQSSYDAAVG-NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
Q V NA+I Y ++G + +A FD M +N ISW +IAGYA++G
Sbjct: 341 RILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSE 400
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSC- 476
EA++L + + GM+P+ + S ACSH G G ++ + + + + + C
Sbjct: 401 EALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAV---KAGCQFNSYVCN 457
Query: 477 -VVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD-MEP 534
++ ++ + +E + +M +K T S W++ + A + N L + AR++FD M
Sbjct: 458 ALISMYGKCRNMEYVRQVFNRMRVKDTVS-WNSFIAA--LVQNNMLED--ARHIFDNMLS 512
Query: 535 EKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKN 571
V++ + + Y A D A + K M + N
Sbjct: 513 RDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPN 549
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 189/423 (44%), Gaps = 45/423 (10%)
Query: 71 VIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
++ Y ++ A F +MP+RN+V+WT MISGY + +F M G +
Sbjct: 163 MVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPD 222
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWI-LF 189
Q ++S L A ++ L +++ + K F ++ + +++L++Y + D I F
Sbjct: 223 QSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFF 282
Query: 190 ERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELM 249
+ + ++ +W+ MI L+ G D + ++ + + L + R G I
Sbjct: 283 DGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARC--GRITEA 340
Query: 250 KI--SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG 307
+I QI D I+ S N ++I Y + G + A +L+ M + IS +I+G
Sbjct: 341 RILFEQIPDPIVV----SWN----AMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAG 392
Query: 308 FARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSY 367
+A+ + S+EA DL + + M L C+++ +L GRQ+H+ A K +
Sbjct: 393 YAQ-NGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQF 451
Query: 368 DAAVGNALIDMYAK-------------------------------SGEIADANRAFDEMG 396
++ V NALI MY K + + DA FD M
Sbjct: 452 NSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNML 511
Query: 397 DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWE 456
++V+SWT++I+ YA+ G EA+E +K M HE PN LL C G G +
Sbjct: 512 SRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQ 571
Query: 457 LFT 459
+ T
Sbjct: 572 IHT 574
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/378 (19%), Positives = 161/378 (42%), Gaps = 43/378 (11%)
Query: 170 SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
SA + A+ G + +A +F+ + +D+++WN+MI G +D+ LF ++ ++
Sbjct: 37 SARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVR 96
Query: 230 PDCF------TLGSILRAS---------------------VGGIELMKISQIHDLIIKLG 262
LG +L A V ++ ++ D +
Sbjct: 97 TATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRD 156
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
+ S N S++ Y + A+ L++ M + ++++ T +ISG+ R + H K +D+F
Sbjct: 157 VTSWN----SMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGK-GWDIF 211
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
+ M + D +L+ + L + + K D +G +++++Y +
Sbjct: 212 RMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRD 271
Query: 383 GEIAD-ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
D A + FD M ++N +W+++IA + G AI +Y + + +P+ L+
Sbjct: 272 ASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKS-IPSQTALLTG 330
Query: 442 LFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
L C G E LF + + P ++ ++ + + G ++ A + +M +
Sbjct: 331 LARC---GRITEARILFEQIPD-----PIVVSWNAMITGYMQNGMVDEAKELFDRMPFRN 382
Query: 502 TASLWSAILGACSIYGNT 519
T S W+ ++ + G +
Sbjct: 383 TIS-WAGMIAGYAQNGRS 399
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 124/274 (45%), Gaps = 28/274 (10%)
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN--HSKEAFDLFKDMILKK 329
S+I Y G + A L+ ++ ++ + T L+SG+AR ++ FD +
Sbjct: 69 SMISAYCNSGMLEDARILFDAISGGNVRTATILLSGYARLGRVLDARRVFDGMPER--NT 126
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ + ++ C + N + + R++ F S D N+++ Y S ++ DA
Sbjct: 127 VAWNAMVSCYVQN-----GDITMARRL----FDAMPSRDVTSWNSMVTGYCHSRQMVDAW 177
Query: 390 RAFDEMGDKNVISWTSLIAGYAK---HGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
F +M +N+++WT +I+GY + HG G ++++ M HEG P+ F S+L A
Sbjct: 178 NLFKQMPQRNLVTWTVMISGYVRIEQHGKG---WDIFRMMHHEGASPDQSNFASVLSAV- 233
Query: 447 HTGLTCEG-WELFTDMINKYRILPRAEHFSCVVDLFARRGQ-LESAYNMIRQMNIKPTAS 504
TGL G E+ ++ K + +++++ R L+ A M ++
Sbjct: 234 -TGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGM-VERNEY 291
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSV 538
WS ++ A S G AA ++ +P KS+
Sbjct: 292 TWSTMIAALSHGGRID----AAIAVYGRDPVKSI 321
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 76/182 (41%), Gaps = 15/182 (8%)
Query: 368 DAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMK 427
D + +A I A+ G + +A FD M +++I+W S+I+ Y G +A L+ +
Sbjct: 32 DKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAIS 91
Query: 428 HEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQL 487
N T LL + G + +F M + + ++ +V + + G +
Sbjct: 92 G----GNVRTATILLSGYARLGRVLDARRVFDGMPERNTVA-----WNAMVSCYVQNGDI 142
Query: 488 ESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKS-VNYVVLSNI 546
A + M + S S + G C S + A NLF P+++ V + V+ +
Sbjct: 143 TMARRLFDAMPSRDVTSWNSMVTGYCH-----SRQMVDAWNLFKQMPQRNLVTWTVMISG 197
Query: 547 YT 548
Y
Sbjct: 198 YV 199
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 101/257 (39%), Gaps = 45/257 (17%)
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWT 404
A + L R++ F D N++I Y SG + DA FD + NV + T
Sbjct: 44 ARLGRLREAREV----FDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVRTAT 99
Query: 405 SLIAGYAKHGYGHEAIELYKKMKH--------------------------EGMVPNDVT- 437
L++GYA+ G +A ++ M + M DVT
Sbjct: 100 ILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTS 159
Query: 438 FLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
+ S++ H+ + W LF M + + ++ ++ + R Q +++ R M
Sbjct: 160 WNSMVTGYCHSRQMVDAWNLFKQMPQRNLVT-----WTVMISGYVRIEQHGKGWDIFRMM 214
Query: 498 N---IKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVV---LSNIYTA-A 550
+ P S ++++L A + G LG L ++ + V+ + N+YT A
Sbjct: 215 HHEGASPDQSNFASVLSA--VTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDA 272
Query: 551 GAWDNARKTRKLMEERS 567
A D A K M ER+
Sbjct: 273 SALDIAIKFFDGMVERN 289
>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Brachypodium distachyon]
Length = 902
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 177/563 (31%), Positives = 300/563 (53%), Gaps = 6/563 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY+S+L C + + I N +++L ++ + ++K G + A+ F
Sbjct: 300 DEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLF 359
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ + ++ VSW A++ G N DE A+ + M GV ++ ++++ + AC+ +R +
Sbjct: 360 NLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATE 419
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ I K N V S+L+D Y+K G +E + +++ +V N +I GL
Sbjct: 420 TGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLV 479
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
D++ LF+ ++R G+KP FT SIL G + + Q+H +K G + +
Sbjct: 480 QNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDT 539
Query: 269 LTG-SLIDVYAKYGSIRSAYQLYRSML-KTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
G SL+ Y K A +L M +++ TA++SG+A++ +S ++ F M
Sbjct: 540 SVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQN-GYSYQSLLSFWRMR 598
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ-SSYDAAVGNALIDMYAKSGEI 385
+ D+V +L C+ + +L+ G++IH K SY A +A+IDMY+K G+I
Sbjct: 599 SYDVHPDEVTFASILKACSEMTALSDGKEIHGLIIKSGFGSYKTAT-SAIIDMYSKCGDI 657
Query: 386 ADANRAFDEMGDKNVIS-WTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ AF E+ K I+ W S+I G+AK+GY EA+ L++KM+ + ++VTFL +L A
Sbjct: 658 ISSFEAFKELKSKQDITLWNSMILGFAKNGYADEALLLFQKMQDSQIKSDEVTFLGVLIA 717
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
C+H GL EG F M Y I+PR +H++C +DL R G L+ A +I ++ +P
Sbjct: 718 CAHAGLISEGRHYFDSMSKVYGIMPRVDHYACFIDLLGRGGHLQEAQEVINELPFRPDGV 777
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
+W+ L AC ++ + GE+AA+ L ++EP+ S YV+LSN+Y AAG W A+ R+ M
Sbjct: 778 IWATYLAACRMHKDEERGEIAAKELVELEPQNSSTYVLLSNMYAAAGNWVEAKMAREAMR 837
Query: 565 ERSLRKNPGYSFLQSSKKNILLL 587
E+ K PG S++ K L L
Sbjct: 838 EKGATKFPGCSWITVGNKTSLFL 860
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 151/486 (31%), Positives = 263/486 (54%), Gaps = 9/486 (1%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
ST+ S+L + A + +HA + +G ++N+ + + +I YAK G + A FD
Sbjct: 201 STFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDC 260
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
E+NVV W AM++G +N Y A+ +F M R G+ A++FTY S L ACA + G
Sbjct: 261 SGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLG 320
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
R +Q K +LFV +A LD+++K G I+DA LF I KD VSWNA++ GL
Sbjct: 321 RQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHN 380
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
++++ + + M G+ PD + +++ A QIH L +K + S++ +
Sbjct: 381 EEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVG 440
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
SLID Y+K+G + S ++ + + I+ LI+G + +N EA DLF+ ++ +
Sbjct: 441 SSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQ-NNREDEAIDLFQQVLRDGL 499
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSY---DAAVGNALIDMYAKSGEIAD 387
+L+ C + S +G+Q+H + K S + D +VG +L+ Y K+ D
Sbjct: 500 KPSSFTFSSILSGCTGLLSSIIGKQVHCYTLK--SGFLNDDTSVGVSLVGTYLKARMPED 557
Query: 388 ANRAFDEMGD-KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
AN+ EM D KN++ WT++++GYA++GY ++++ + +M+ + P++VTF S+L ACS
Sbjct: 558 ANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACS 617
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
+G E+ +I K S ++D++++ G + S++ +++ K +LW
Sbjct: 618 EMTALSDGKEIH-GLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLW 676
Query: 507 -SAILG 511
S ILG
Sbjct: 677 NSMILG 682
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 118/382 (30%), Positives = 204/382 (53%), Gaps = 5/382 (1%)
Query: 71 VIIFYAKVGDVLSARKAFDRMP-ERNVVSWTAMISGYAQ-NGYDENALLVFSAMLRSGVR 128
V+ +G + AR RMP + V+W A+ISGYAQ +G + ++ M G+
Sbjct: 138 VVCALTALGRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLW 197
Query: 129 ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWIL 188
+ T++S L A A GR + + + N+FV S+L++LYAKCG I DA ++
Sbjct: 198 PTRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILV 257
Query: 189 FERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIEL 248
F+ K+VV WNAM+ GL + ++ +F M R G++ D FT S+L A
Sbjct: 258 FDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSH 317
Query: 249 MKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGF 308
Q+ + IK +++S + + +D+++K+G+I A L+ + D +S AL+ G
Sbjct: 318 CLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGL 377
Query: 309 ARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYD 368
++ +EA + K M L + D+V ++N C+N+ + G+QIH A K+ +
Sbjct: 378 THNEE-DEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSN 436
Query: 369 AAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKH 428
AVG++LID Y+K G++ + ++ +++ LIAG ++ EAI+L++++
Sbjct: 437 HAVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLR 496
Query: 429 EGMVPNDVTFLSLLFACSHTGL 450
+G+ P+ TF S+L C TGL
Sbjct: 497 DGLKPSSFTFSSILSGC--TGL 516
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 214/450 (47%), Gaps = 43/450 (9%)
Query: 53 HAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYD 112
H G S + ++ YA+ G V AR+ F + + V W +MISGY + G
Sbjct: 54 HCDAEKRGLGSGAFCAAALVNMYARCGRVGDARRVFGGISLPDTVCWASMISGYHRAGRF 113
Query: 113 ENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSAL 172
+ A+ +F+ M + G ++ T + + A +
Sbjct: 114 QEAVCLFTRMEKMGSSPDRVTCVAVVCALTAL---------------------------- 145
Query: 173 LDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGGLAMQ-GFNDDSFWLFRSMMRQGMKP 230
G +EDA L R+ V+WNA+I G A Q G + F L++ M G+ P
Sbjct: 146 -------GRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWP 198
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
T S+L A+ ++ Q+H ++ GL+++ + SLI++YAK G I A ++
Sbjct: 199 TRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVF 258
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI--DDVILCLMLNICANVA 348
+ +++ A+++G R++ + EA +F + +K++G+ D+ +L CA++
Sbjct: 259 DCSGEKNVVMWNAMLNGLVRNE-YQVEAIQMF--LYMKRLGLEADEFTYVSVLGACAHLD 315
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA 408
S LGRQ+ K V NA +DM++K G I DA F+ + K+ +SW +L+
Sbjct: 316 SHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLV 375
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
G + EAI + K M +G+ P++V+F +++ ACS+ T G ++ + K+ I
Sbjct: 376 GLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHC-LAMKHSIC 434
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMN 498
S ++D +++ G +ES ++ Q++
Sbjct: 435 SNHAVGSSLIDFYSKHGDVESCRKVLAQVD 464
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 192/411 (46%), Gaps = 49/411 (11%)
Query: 110 GYDENALLVFSAMLRS-------GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRF 162
G +A V A +R+ GVR +QF ++ L AC+R+ L G+ +K
Sbjct: 3 GATTSATAVLDAFVRARRCSAGGGVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGL 62
Query: 163 VENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRS 222
F +AL+++YA+CG + DA +F I D V W +MI G G ++ LF
Sbjct: 63 GSGAFCAAALVNMYARCGRVGDARRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTR 122
Query: 223 MMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG-LESSNKLTGSLIDVYAKYG 281
M + G PD T +++ A + LG LE + L
Sbjct: 123 MEKMGSSPDRVTCVAVVCA----------------LTALGRLEDARTL------------ 154
Query: 282 SIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLML 341
L+R + ++ A+ISG+A+ E F L+KDM + ML
Sbjct: 155 -------LHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASML 207
Query: 342 NICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVI 401
+ AN + GRQ+HA A ++ + VG++LI++YAK G I DA FD G+KNV+
Sbjct: 208 SAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVV 267
Query: 402 SWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM 461
W +++ G ++ Y EAI+++ MK G+ ++ T++S+L AC+H C G ++
Sbjct: 268 MWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVT 327
Query: 462 INKYRILPRAEHF--SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
I A F + +D+ ++ G ++ A + + K T S W+A+L
Sbjct: 328 IKN---CMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVS-WNALL 374
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 8/184 (4%)
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAF 392
D L L+ C+ + +L G+Q H A K A AL++MYA+ G + DA R F
Sbjct: 30 DQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDARRVF 89
Query: 393 DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTC 452
+ + + W S+I+GY + G EA+ L+ +M+ G P+ VT ++++ A + G
Sbjct: 90 GGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTALGRLE 149
Query: 453 EGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA----YNMIRQMNIKPTASLWSA 508
+ L M + ++ V+ +A++ +E Y +R + PT S +++
Sbjct: 150 DARTLLHRMPAPSSTVA----WNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFAS 205
Query: 509 ILGA 512
+L A
Sbjct: 206 MLSA 209
>gi|297802780|ref|XP_002869274.1| hypothetical protein ARALYDRAFT_491483 [Arabidopsis lyrata subsp.
lyrata]
gi|297315110|gb|EFH45533.1| hypothetical protein ARALYDRAFT_491483 [Arabidopsis lyrata subsp.
lyrata]
Length = 686
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 178/579 (30%), Positives = 307/579 (53%), Gaps = 10/579 (1%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGY 61
N + + F Q+ + + D TY + L FC+ + R + + ++ +G
Sbjct: 71 NTILSGFDDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFRLGLQLQSTVVKSGL 130
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG-YDENALLVFS 120
ES+L + I Y++ G AR+ FD MP ++++SW +++SG +Q G + A+L+F
Sbjct: 131 ESDLVVGNSFITMYSRSGSFRGARRVFDEMPFKDMISWNSLLSGLSQEGTFGFEAVLIFR 190
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M+R GV + +++S + C L+ R I G K + L V + L+ Y+KCG
Sbjct: 191 DMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCG 250
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+E +F ++ ++VVSW MI DD+ +F +M G+ P+ T +L
Sbjct: 251 VLEAVKSVFYQMSERNVVSWTTMI-----SSNRDDAVSIFLNMRLDGVYPNEVTFVGLLN 305
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
A ++ + +IH L IK G S + S I +YAK+ ++ A + + + +IIS
Sbjct: 306 AVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITMYAKFEALEDAKKAFDDITFREIIS 365
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNL--GRQIHA 358
A+ISGFA++ S EA +F + M ++ +LN A +++ G++ HA
Sbjct: 366 WNAMISGFAQN-GFSHEALKMFLSATAETMP-NEYTFGSVLNAIAFAEDISVKHGQRCHA 423
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHE 418
K + V +AL+DMYAK G I ++ + F+EM +N WTS+I+ Y+ HG +
Sbjct: 424 HLLKLGLNSCPVVSSALLDMYAKRGNINESEKVFNEMSQRNQFVWTSIISAYSSHGDFNS 483
Query: 419 AIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVV 478
+ L+ +M E + P+ VTFLS+L AC+ G+ +G E+ MI Y + P EH+SC+V
Sbjct: 484 VMNLFHEMIKENVAPDLVTFLSVLTACNRKGMVDKGHEILNMMIEDYNLEPSHEHYSCMV 543
Query: 479 DLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSV 538
D+ R G+L+ A ++ ++ P S+ ++LG+C ++GN +G A +M+PE S
Sbjct: 544 DMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSG 603
Query: 539 NYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
+YV + NIY WD A + RK M ++++ K G+S++
Sbjct: 604 SYVQMYNIYAEKEQWDKAAEIRKAMRKKNVSKEAGFSWI 642
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 142/497 (28%), Positives = 256/497 (51%), Gaps = 29/497 (5%)
Query: 34 MSLLQFCIDKKAER----QAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFD 89
M + C+ KA R + IH T G+ S + +S V+ Y K G +A F+
Sbjct: 1 MDEVTLCLALKACRGDLKRGCQIHGFSTTCGFTSFVCVSNAVMGMYRKAGRFDNALYIFE 60
Query: 90 RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG 149
+ + +VVSW ++SG+ N + AL M +GV + FTYS+AL C +
Sbjct: 61 NLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFRL 117
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
G +Q ++ K +L V ++ + +Y++ G A +F+ + KD++SWN+++ GL+
Sbjct: 118 GLQLQSTVVKSGLESDLVVGNSFITMYSRSGSFRGARRVFDEMPFKDMISWNSLLSGLSQ 177
Query: 210 QG-FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
+G F ++ +FR MMR+G++ D + S++ +L QIH L IK G ES +
Sbjct: 178 EGTFGFEAVLIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLE 237
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ L+ Y+K G + + ++ M + +++S T +IS RDD A +F +M L
Sbjct: 238 VGNILMSRYSKCGVLEAVKSVFYQMSERNVVSWTTMISS-NRDD-----AVSIFLNMRLD 291
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ ++V +LN + G +IH K + +VGN+ I MYAK + DA
Sbjct: 292 GVYPNEVTFVGLLNAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITMYAKFEALEDA 351
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+AFD++ + +ISW ++I+G+A++G+ HEA++++ E M PN+ TF S+L A +
Sbjct: 352 KKAFDDITFREIISWNAMISGFAQNGFSHEALKMFLSATAETM-PNEYTFGSVLNAIAFA 410
Query: 449 -------GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
G C L +N ++ A ++D++A+RG + + + +M+ +
Sbjct: 411 EDISVKHGQRCHA-HLLKLGLNSCPVVSSA-----LLDMYAKRGNINESEKVFNEMS-QR 463
Query: 502 TASLWSAILGACSIYGN 518
+W++I+ A S +G+
Sbjct: 464 NQFVWTSIISAYSSHGD 480
>gi|242066256|ref|XP_002454417.1| hypothetical protein SORBIDRAFT_04g030430 [Sorghum bicolor]
gi|241934248|gb|EES07393.1| hypothetical protein SORBIDRAFT_04g030430 [Sorghum bicolor]
Length = 703
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 175/578 (30%), Positives = 313/578 (54%), Gaps = 4/578 (0%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYE 62
++RA+ + Q + A+ LD T+ LL+ C + +HA I +
Sbjct: 71 LLRAHIRARQWRAAILLGPRL-RVRLDGFTFSLLLRACAALPSLAHGRAVHAVAIRSCTA 129
Query: 63 S-NLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSA 121
S + ++T ++ YA+ GD++ A A+ + + ++V T++++GY QNG E AL F+
Sbjct: 130 SEDAFVATAIVQMYARCGDMVGAINAYGVLEKPDIVLRTSVVTGYEQNGMAEEALEFFAR 189
Query: 122 -MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
++ GV T SA+ A A++ ++ G+ + + +L + + +L Y K G
Sbjct: 190 NVVGQGVMLTPVTLVSAMSAAAQLGHVRKGQACHAYVVRNSLGYDLALVNTVLSFYVKIG 249
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+ + LFE + +DV++W+ MI G G + ++R M++ ++P+ TL S+L+
Sbjct: 250 DFQASMRLFEGMTDRDVITWSCMIKGYVQHGDAHEGLRMYREMVKARVQPNSVTLVSVLQ 309
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
A ++ + ++H + + +G E + +L+D+Y K A L+ M K D+++
Sbjct: 310 ACALVVDAEEGKRVHRVAVSIGCELEVGVATALVDMYMKCSCHEEAMCLFHRMPKKDVVA 369
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
A+I G +++ E+ +FK M+L D + + +L C+ L +H +
Sbjct: 370 WAAVIGGLTQNEL-PGESLHVFKCMLLDDHVPDAITMVKVLAACSEFGGTRLAICLHGYL 428
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
+ + +A V AL+D+Y+K G+I A R F+ +K+++ W S+IAGY HG G EA+
Sbjct: 429 VRNGFNNNAFVAAALLDLYSKCGDIDSAVRVFEGTTEKDIVVWGSMIAGYGAHGLGQEAV 488
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDL 480
LY++M + PN VTF+S+L ACSH+GL EG ++F M + ++P AEH S +VDL
Sbjct: 489 ALYQRMIASSIQPNSVTFVSVLSACSHSGLVQEGIQIFDSMTQVFGVVPNAEHQSAMVDL 548
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNY 540
R G+L+ A IR M+ + A W A+L AC + NT + ++AA++L ++P+ Y
Sbjct: 549 LGRAGELQEAIRFIRGMDGRAVAHTWCALLAACREHNNTKMSKVAAKSLLKLDPDHVGYY 608
Query: 541 VVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+L+NIY W++ + TR ++ R LRK PGYS ++
Sbjct: 609 NLLTNIYAYDEKWESVKDTRDMVRGRDLRKVPGYSSVE 646
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/424 (28%), Positives = 219/424 (51%), Gaps = 20/424 (4%)
Query: 2 NIVRANFKTGQLKQALKF---SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIIT 58
++V + G ++AL+F ++ +L P T +S + R+ HA+++
Sbjct: 169 SVVTGYEQNGMAEEALEFFARNVVGQGVMLTPVTLVSAMSAAAQLGHVRKGQACHAYVVR 228
Query: 59 NGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLV 118
N +L L V+ FY K+GD ++ + F+ M +R+V++W+ MI GY Q+G L +
Sbjct: 229 NSLGYDLALVNTVLSFYVKIGDFQASMRLFEGMTDRDVITWSCMIKGYVQHGDAHEGLRM 288
Query: 119 FSAMLRSGVRANQFTYSSALRACAR-MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYA 177
+ M+++ V+ N T S L+ACA + +G R+ + ++ G +E + V +AL+D+Y
Sbjct: 289 YREMVKARVQPNSVTLVSVLQACALVVDAEEGKRVHRVAVSIGCELE-VGVATALVDMYM 347
Query: 178 KCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGS 237
KC E+A LF R+ +KDVV+W A+IGGL +S +F+ M+ PD T+
Sbjct: 348 KCSCHEEAMCLFHRMPKKDVVAWAAVIGGLTQNELPGESLHVFKCMLLDDHVPDAITMVK 407
Query: 238 ILRA--SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLK 295
+L A GG L +H +++ G ++ + +L+D+Y+K G I SA +++ +
Sbjct: 408 VLAACSEFGGTRLAIC--LHGYLVRNGFNNNAFVAAALLDLYSKCGDIDSAVRVFEGTTE 465
Query: 296 TDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQ 355
DI+ ++I+G+ +EA L++ MI + + V +L+ C++ + G Q
Sbjct: 466 KDIVVWGSMIAGYGA-HGLGQEAVALYQRMIASSIQPNSVTFVSVLSACSHSGLVQEGIQ 524
Query: 356 IHAFAFKYQSSYDAAVGN-----ALIDMYAKSGEIADANRAFDEMGDKNVI-SWTSLIAG 409
I F + V N A++D+ ++GE+ +A R M + V +W +L+A
Sbjct: 525 I----FDSMTQVFGVVPNAEHQSAMVDLLGRAGELQEAIRFIRGMDGRAVAHTWCALLAA 580
Query: 410 YAKH 413
+H
Sbjct: 581 CREH 584
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 230/484 (47%), Gaps = 25/484 (5%)
Query: 49 AHLIHAHIITNGY-ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYA 107
AHL HA+++ +G S+ HL+ V+ +Y AR FD P A++ +
Sbjct: 22 AHL-HANLLRSGLLHSSHHLTAHVLAWYPPG----LARDLFDEFPSPTPRLANALLRAHI 76
Query: 108 QNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENL 166
+ A ++ LR VR + FT+S LRACA + L GR + +I+ E+
Sbjct: 77 R-ARQWRAAILLGPRLR--VRLDGFTFSLLLRACAALPSLAHGRAVHAVAIRSCTASEDA 133
Query: 167 FVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLF-RSMMR 225
FV +A++ +YA+CG + A + +E+ D+V +++ G G +++ F R+++
Sbjct: 134 FVATAIVQMYARCGDMVGAINAYGVLEKPDIVLRTSVVTGYEQNGMAEEALEFFARNVVG 193
Query: 226 QGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRS 285
QG+ TL S + A+ + K H +++ L L +++ Y K G ++
Sbjct: 194 QGVMLTPVTLVSAMSAAAQLGHVRKGQACHAYVVRNSLGYDLALVNTVLSFYVKIGDFQA 253
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
+ +L+ M D+I+ + +I G+ + + + E ++++M+ ++ + V L +L CA
Sbjct: 254 SMRLFEGMTDRDVITWSCMIKGYVQHGD-AHEGLRMYREMVKARVQPNSVTLVSVLQACA 312
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
V G+++H A + V AL+DMY K +A F M K+V++W +
Sbjct: 313 LVVDAEEGKRVHRVAVSIGCELEVGVATALVDMYMKCSCHEEAMCLFHRMPKKDVVAWAA 372
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLT----CEGWELFTDM 461
+I G ++ E++ ++K M + VP+ +T + +L ACS G T C L +
Sbjct: 373 VIGGLTQNELPGESLHVFKCMLLDDHVPDAITMVKVLAACSEFGGTRLAICLHGYLVRNG 432
Query: 462 INKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSL 521
N + A ++DL+++ G ++SA + K S I G YG L
Sbjct: 433 FNNNAFVAAA-----LLDLYSKCGDIDSAVRVFEGTTEKDIVVWGSMIAG----YGAHGL 483
Query: 522 GELA 525
G+ A
Sbjct: 484 GQEA 487
>gi|225456719|ref|XP_002268090.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 529
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 178/533 (33%), Positives = 295/533 (55%), Gaps = 14/533 (2%)
Query: 56 IITNGYESNLHLSTKVIIFYAKV---GDVLSARKAFDRMPERNVVSWTAMISGYAQNGYD 112
+ITNG+ N L++K+++ +A + G AR+ D++ + +W +I GY +
Sbjct: 1 MITNGHLHNPTLASKLVVSFASITLPGTTSVARRIADQIDGLDTYTWNTIIRGYLEGNDP 60
Query: 113 ENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSAL 172
E A+LV++ + + G++ + +T ++AC + G I G I K F + +++AL
Sbjct: 61 EEAILVYNHVRKKGLKVDTYTLVFVIKACGLRPVILEGEQIHGQIFKLGFEFEVIIQTAL 120
Query: 173 LDLYA----KCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGM 228
L+LY CG + +F+ + ++D+V WNA+I A + M+R +
Sbjct: 121 LNLYGLFDEDCGLQQ----IFDEMPQRDLVMWNALIAAYAHGNCPYKVREVSYDMVRSNV 176
Query: 229 KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQ 288
KP+ T SIL L + +H + K +E + +LI VY+K GSIR A Q
Sbjct: 177 KPNGVTAVSILSVCSSLRALREGKAVHGYVTKNLIEFDVFVHNALIVVYSKCGSIRDAVQ 236
Query: 289 LYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
+++ M +++S T+LI+G++ D+N EA FK M + + D++ + ++ +C+ +
Sbjct: 237 VFQLMPMRNVVSWTSLINGYS-DNNCPNEALGFFKQMEAENIRPDEITVLGVVCMCSKLR 295
Query: 349 SLNLGRQIHAFAFKYQSSYDA-AVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI 407
S LG I + K ++ A+ NAL+DM+AK G I A + FD M +K ++SWT +I
Sbjct: 296 SFELGEWISQYVVKIGLLKESPAIANALMDMHAKCGNINRACQIFDGMEEKTIVSWTIMI 355
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRI 467
G A HG+G A+ + +M+ EG P+ + FLSLL ACSH GL EGW F+ M Y I
Sbjct: 356 QGLAMHGHGLSALVRFCQMQREGFKPDSLVFLSLLSACSHAGLVDEGWRCFSSMEADYHI 415
Query: 468 LPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAAR 527
P EH+ C+VD+ R G ++ A+ ++ M IKP +W +LGAC GN SL
Sbjct: 416 SPWMEHYGCMVDILCRAGLVDEAFKFVQNMPIKPDMIVWRTLLGACHTQGNISLANQVMN 475
Query: 528 NLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK-NPGYSFLQS 579
L ++ P+KS +YV+LSN++ + WDN + RK M +R + K +PG SF+++
Sbjct: 476 YLCELGPKKSEDYVLLSNLFASNAEWDNVGEVRKEMGDRGVTKQDPGCSFIEA 528
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 195/393 (49%), Gaps = 10/393 (2%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D T + +++ C + + IH I G+E + + T ++ Y + ++
Sbjct: 77 VDTYTLVFVIKACGLRPVILEGEQIHGQIFKLGFEFEVIIQTALLNLYGLFDEDCGLQQI 136
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD MP+R++V W A+I+ YA V M+RS V+ N T S L C+ +R L
Sbjct: 137 FDEMPQRDLVMWNALIAAYAHGNCPYKVREVSYDMVRSNVKPNGVTAVSILSVCSSLRAL 196
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G+ + G + K ++FV +AL+ +Y+KCG I DA +F+ + ++VVSW ++I G
Sbjct: 197 REGKAVHGYVTKNLIEFDVFVHNALIVVYSKCGSIRDAVQVFQLMPMRNVVSWTSLINGY 256
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFT-LGSILRAS-VGGIELMK-ISQIHDLIIKLG-L 263
+ +++ F+ M + ++PD T LG + S + EL + ISQ ++K+G L
Sbjct: 257 SDNNCPNEALGFFKQMEAENIRPDEITVLGVVCMCSKLRSFELGEWISQ---YVVKIGLL 313
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
+ S + +L+D++AK G+I A Q++ M + I+S T +I G A H A F
Sbjct: 314 KESPAIANALMDMHAKCGNINRACQIFDGMEEKTIVSWTIMIQGLAM-HGHGLSALVRFC 372
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
M + D ++ +L+ C++ ++ G R + Y S ++D+ ++
Sbjct: 373 QMQREGFKPDSLVFLSLLSACSHAGLVDEGWRCFSSMEADYHISPWMEHYGCMVDILCRA 432
Query: 383 GEIADANRAFDEMGDK-NVISWTSLIAGYAKHG 414
G + +A + M K ++I W +L+ G
Sbjct: 433 GLVDEAFKFVQNMPIKPDMIVWRTLLGACHTQG 465
>gi|356537365|ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Glycine max]
Length = 722
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 174/555 (31%), Positives = 306/555 (55%), Gaps = 13/555 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ ++L C + + H +H+ +I +G+ + +I Y K G V+ A + F
Sbjct: 177 DKYTFATMLSLCSLELFDYGRH-VHSVVIKSGFLGWTSVVNSLITMYFKCGCVVDACEVF 235
Query: 89 DRMPE---RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
+ E R+ VS+ AMI G+A E+A L+F M + + T+ S + +C+ +R
Sbjct: 236 EEAEEGGSRDYVSYNAMIDGFASVERSEDAFLIFRDMQKGCFDPTEVTFVSVMSSCSSLR 295
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
G Q K FV + V +A++ +Y+ G + + +FE +E +DVVSWN M+
Sbjct: 296 ---AGCQAQSQAIKMGFVGCVAVNNAMMTMYSGFGEVIEVQNIFEGMEERDVVSWNIMVS 352
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
+ +++ + M R+G++PD FT GS+L A+ L + IH L+ K GL
Sbjct: 353 MFLQENLEEEAMLSYLKMRREGIEPDEFTYGSLLAAT---DSLQVVEMIHSLLCKSGLVK 409
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
L +L+ Y ++G I+ A+Q++ + +IS ++ISGF + H + + F +
Sbjct: 410 IEVLN-ALVSAYCRHGKIKRAFQIFSGVPYKSLISWNSIISGFLMN-GHPLQGLEQFSAL 467
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ ++ + L L+L+IC+++++++ G+Q+H + ++ S + ++GNAL+ MYAK G +
Sbjct: 468 LSTQVKPNAYSLSLVLSICSSMSAMSHGKQVHGYILRHGFSSEVSLGNALVTMYAKCGSL 527
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMK-HEGMVPNDVTFLSLLFA 444
A R FD M +++ I+W ++I+ YA+HG G EA+ ++ M+ G+ P+ TF S+L A
Sbjct: 528 DKALRVFDAMVERDTITWNAIISAYAQHGRGEEAVCCFEAMQTSPGIKPDQATFTSVLSA 587
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
CSH GL +G +F M+ Y +P +HFSC+VDL R G L+ A +I+ ++
Sbjct: 588 CSHAGLVDDGIRIFDTMVKVYGFVPSVDHFSCIVDLLGRSGYLDEAERVIKSGYFGAHSN 647
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
+ ++ AC+ +GN LG AR + + + YV+LSNI AAG W+ A R++M
Sbjct: 648 ICWSLFSACAAHGNLGLGRTVARLILERDHNNPSVYVLLSNICAAAGQWEEAANLREMMR 707
Query: 565 ERSLRKNPGYSFLQS 579
E K PG S++++
Sbjct: 708 EFGTIKQPGCSWIRT 722
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 217/445 (48%), Gaps = 14/445 (3%)
Query: 76 AKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYS 135
AK+ V A K FD +P+ ++ W A+I+G A+ G + A +F M + GV+A+++T++
Sbjct: 123 AKLDSVEHALKVFDGIPKGHIAVWNAVITGCAEKGNRDFAFGLFRDMNKMGVKADKYTFA 182
Query: 136 SALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER- 194
+ L C+ + GR + + K F+ V ++L+ +Y KCG + DA +FE E
Sbjct: 183 TMLSLCS-LELFDYGRHVHSVVIKSGFLGWTSVVNSLITMYFKCGCVVDACEVFEEAEEG 241
Query: 195 --KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS 252
+D VS+NAMI G A ++D+F +FR M + P T S++ + L
Sbjct: 242 GSRDYVSYNAMIDGFASVERSEDAFLIFRDMQKGCFDPTEVTFVSVMSSCS---SLRAGC 298
Query: 253 QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDD 312
Q IK+G + +++ +Y+ +G + ++ M + D++S ++S F + +
Sbjct: 299 QAQSQAIKMGFVGCVAVNNAMMTMYSGFGEVIEVQNIFEGMEERDVVSWNIMVSMFLQ-E 357
Query: 313 NHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG 372
N +EA + M + + D+ +L A SL + IH+ K V
Sbjct: 358 NLEEEAMLSYLKMRREGIEPDEFTYGSLL---AATDSLQVVEMIHSLLCK-SGLVKIEVL 413
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
NAL+ Y + G+I A + F + K++ISW S+I+G+ +G+ + +E + + +
Sbjct: 414 NALVSAYCRHGKIKRAFQIFSGVPYKSLISWNSIISGFLMNGHPLQGLEQFSALLSTQVK 473
Query: 433 PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYN 492
PN + +L CS G ++ I ++ + +V ++A+ G L+ A
Sbjct: 474 PNAYSLSLVLSICSSMSAMSHGKQVH-GYILRHGFSSEVSLGNALVTMYAKCGSLDKALR 532
Query: 493 MIRQMNIKPTASLWSAILGACSIYG 517
+ M + T + W+AI+ A + +G
Sbjct: 533 VFDAMVERDTIT-WNAIISAYAQHG 556
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 130/298 (43%), Gaps = 42/298 (14%)
Query: 194 RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ 253
++ + N M+ LA + S LF PD + L + + A+ +Q
Sbjct: 8 KEPHIKLNHMLAALARSNQHTQSLKLFVHA-HSSFTPDHYILSTAITAAANARRAAFGAQ 66
Query: 254 IHDLIIKLGLESSNKLTGSLIDVY--------------------------------AKYG 281
+H L ++ GL + + + SL+ +Y AK
Sbjct: 67 LHALAVRTGLGAHSHVANSLLSLYAKAHRDLASVKLTFQEIDCPDAYSWTTLLSACAKLD 126
Query: 282 SIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI--DDVILCL 339
S+ A +++ + K I A+I+G A N AF LF+DM KMG+ D
Sbjct: 127 SVEHALKVFDGIPKGHIAVWNAVITGCAEKGNRDF-AFGLFRDM--NKMGVKADKYTFAT 183
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEM---G 396
ML++C+ + + GR +H+ K +V N+LI MY K G + DA F+E G
Sbjct: 184 MLSLCS-LELFDYGRHVHSVVIKSGFLGWTSVVNSLITMYFKCGCVVDACEVFEEAEEGG 242
Query: 397 DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG 454
++ +S+ ++I G+A +A +++ M+ P +VTF+S++ +CS C+
Sbjct: 243 SRDYVSYNAMIDGFASVERSEDAFLIFRDMQKGCFDPTEVTFVSVMSSCSSLRAGCQA 300
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 73/182 (40%), Gaps = 35/182 (19%)
Query: 368 DAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMK 427
DA L+ AK + A + FD + ++ W ++I G A+ G A L++ M
Sbjct: 111 DAYSWTTLLSACAKLDSVEHALKVFDGIPKGHIAVWNAVITGCAEKGNRDFAFGLFRDMN 170
Query: 428 HEGMVPNDVTFLSLLFACS----------HTGLTCEGWELFTDMINKY------------ 465
G+ + TF ++L CS H+ + G+ +T ++N
Sbjct: 171 KMGVKADKYTFATMLSLCSLELFDYGRHVHSVVIKSGFLGWTSVVNSLITMYFKCGCVVD 230
Query: 466 --RILPRAEH--------FSCVVDLFARRGQLESAYNMIRQMN---IKPTASLWSAILGA 512
+ AE ++ ++D FA + E A+ + R M PT + +++ +
Sbjct: 231 ACEVFEEAEEGGSRDYVSYNAMIDGFASVERSEDAFLIFRDMQKGCFDPTEVTFVSVMSS 290
Query: 513 CS 514
CS
Sbjct: 291 CS 292
>gi|224084249|ref|XP_002307242.1| predicted protein [Populus trichocarpa]
gi|222856691|gb|EEE94238.1| predicted protein [Populus trichocarpa]
Length = 561
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 180/553 (32%), Positives = 301/553 (54%), Gaps = 4/553 (0%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
ST+ S LQ C + LIH + +G+ +++ + T ++ Y+ GD+ SA K F
Sbjct: 11 STFSSSLQACCLLEDWFMGSLIHGQSVKHGFFNDVFVQTSLLGMYSNCGDLESANKVFGC 70
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+ +++ V W +MI G +N E +L+F M+R G+ +FTYS L AC ++ + G
Sbjct: 71 VVQKDAVLWNSMIFGNLKNEKLEEGVLLFGKMVRHGIVPTEFTYSMILNACGKLGDCRWG 130
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
++I + + +L +++ALLD+Y CG E + +F +IE D+VSWN+MI G A
Sbjct: 131 QVIHAQVIVLNVLADLPLQNALLDMYCSCGDTETGFNVFNKIENPDLVSWNSMISGYAEN 190
Query: 211 GFNDDSFWLFRSMMRQGM-KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
G D+ LF ++ + KPD +T +++ A+ +H ++K+G E S +
Sbjct: 191 GEGADAMNLFLQLVGVFLPKPDEYTFAAVISATSAFSATCYGKPLHAQVLKVGSERSVFI 250
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+L+ +Y K G I SA Q++ + D++ T +I G +R + A LF M +
Sbjct: 251 GTTLLSMYLKNGDIESAEQVFNMIEGKDVVLWTEMIMGHSRLGG-GESAIKLFSMMCHEG 309
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
ID L L+ CA++A+LN G IH K + +V +L+ MYAK+G++ A
Sbjct: 310 YKIDSFALSGALSACADLATLNQGEMIHTQTVKRGCDAEISVCGSLVHMYAKNGDLHAAR 369
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
F ++ + ++ W S++ GY++HG EA+ ++ K+ G P+ VTFLSLL ACSH+G
Sbjct: 370 SIFSQVSNPDLKCWNSMLGGYSQHGMAEEAMIIFAKILVNGQRPDQVTFLSLLSACSHSG 429
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNM-IRQMNIKPTASLWSA 508
L EG +L I K ++P +H+SC+V L +R G L+ A + I+ K LW
Sbjct: 430 LVEEG-KLLWSHIKKNDVIPGPKHYSCMVSLLSRAGLLDEAEELIIKSTYSKDHLELWRT 488
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L +C N +G AA + +EPE S +++LSN+Y AAG W+ + R+ + +
Sbjct: 489 LLSSCVNKRNLKIGVRAAEEILQLEPEDSATHILLSNLYAAAGRWEAVAEMRRKISGLMI 548
Query: 569 RKNPGYSFLQSSK 581
K+PG S+++ K
Sbjct: 549 EKDPGLSWIEGKK 561
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 205/403 (50%), Gaps = 16/403 (3%)
Query: 122 MLRSGVRANQFTYSSALRACARMR-WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M G+ N T+SS+L+AC + W G +I G K F ++FV+++LL +Y+ CG
Sbjct: 1 MGTQGLTPNGSTFSSSLQACCLLEDWFMG-SLIHGQSVKHGFFNDVFVQTSLLGMYSNCG 59
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+E A +F + +KD V WN+MI G ++ LF M+R G+ P FT IL
Sbjct: 60 DLESANKVFGCVVQKDAVLWNSMIFGNLKNEKLEEGVLLFGKMVRHGIVPTEFTYSMILN 119
Query: 241 ASVGGIELMKISQ-IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
A G + + Q IH +I L + + L +L+D+Y G + + ++ + D++
Sbjct: 120 A-CGKLGDCRWGQVIHAQVIVLNVLADLPLQNALLDMYCSCGDTETGFNVFNKIENPDLV 178
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMI---LKKMGIDDVILCLMLNICANVASLNLGRQI 356
S ++ISG+A ++ +A +LF ++ L K D+ +++ + ++ G+ +
Sbjct: 179 SWNSMISGYA-ENGEGADAMNLFLQLVGVFLPKP--DEYTFAAVISATSAFSATCYGKPL 235
Query: 357 HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYG 416
HA K S +G L+ MY K+G+I A + F+ + K+V+ WT +I G+++ G G
Sbjct: 236 HAQVLKVGSERSVFIGTTLLSMYLKNGDIESAEQVFNMIEGKDVVLWTEMIMGHSRLGGG 295
Query: 417 HEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSC 476
AI+L+ M HEG + L AC+ +G + T + + AE C
Sbjct: 296 ESAIKLFSMMCHEGYKIDSFALSGALSACADLATLNQGEMIHTQTVKRG---CDAEISVC 352
Query: 477 --VVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
+V ++A+ G L +A ++ Q++ P W+++LG S +G
Sbjct: 353 GSLVHMYAKNGDLHAARSIFSQVS-NPDLKCWNSMLGGYSQHG 394
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 97/185 (52%), Gaps = 2/185 (1%)
Query: 3 IVRANFKTGQLKQALK-FSLSCPDTL-LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
++ + + G + A+K FS+ C + +D L C D Q +IH + G
Sbjct: 285 MIMGHSRLGGGESAIKLFSMMCHEGYKIDSFALSGALSACADLATLNQGEMIHTQTVKRG 344
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
++ + + ++ YAK GD+ +AR F ++ ++ W +M+ GY+Q+G E A+++F+
Sbjct: 345 CDAEISVCGSLVHMYAKNGDLHAARSIFSQVSNPDLKCWNSMLGGYSQHGMAEEAMIIFA 404
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
+L +G R +Q T+ S L AC+ ++ G+++ I+K + S ++ L ++ G
Sbjct: 405 KILVNGQRPDQVTFLSLLSACSHSGLVEEGKLLWSHIKKNDVIPGPKHYSCMVSLLSRAG 464
Query: 181 WIEDA 185
+++A
Sbjct: 465 LLDEA 469
>gi|225439791|ref|XP_002273763.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66500,
mitochondrial-like, partial [Vitis vinifera]
Length = 498
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 177/496 (35%), Positives = 288/496 (58%), Gaps = 17/496 (3%)
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD MP R++ + ++I+ + ++G AL VF + R+G N +T + L A + +
Sbjct: 1 FDEMPHRDLYTLNSLIASHVRSGNAVAALSVFRRIHRAGSHLNSYTLTPVL---AVLDPI 57
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G ++ +I+ G + K+AL+D+Y+K G + + +FE + KDVV+WN M+
Sbjct: 58 CGKQVHALAIKTGSDTPTV-TKTALMDMYSKYGQLGSSVRVFEEVGFKDVVTWNTMLSSF 116
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
G +++ +FR M ++G+ FTL S+L+A + Q+H L++ +G +
Sbjct: 117 VRHGRPEEALAVFREMQKEGVWLSEFTLCSLLKACTLLKAFQQGKQVHALVVVMGRDLV- 175
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
L +LID Y I A +++ ++ K D + +LISG R+ + KEAF +I
Sbjct: 176 VLGTALIDFYTNVECIGEAMEIFHNLNWKKDDVMRNSLISGCVRNRRY-KEAF-----LI 229
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ M + V + L C+ + L +G+QIH A ++ ++D + N L+DMYAK G+I
Sbjct: 230 MSAMRPNVVAVTSALAACSKNSDLWVGKQIHCVAMRFGFTFDTQLCNVLLDMYAKCGKIL 289
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG--MVPNDVTFLSLLFA 444
+A FD M K+V+SWTS+I Y HG+G EA++L+KKM+ EG ++PN VTFL++L A
Sbjct: 290 NARSLFDRMDKKDVVSWTSMIDAYGNHGHGLEALKLFKKMEGEGNSILPNLVTFLAVLSA 349
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM---NIKP 501
C+H+G+ +G E F + KY + P EH++C +D+ R GQ+E + + M KP
Sbjct: 350 CAHSGMVEQGQECFNLIQKKYSLDPGPEHYACFIDILGRAGQIEEVWRLFNNMIKNQTKP 409
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRK 561
TA++W+AIL ACS + S GE AA+NL ++EP K NYV+LSN Y A G WD+ + R
Sbjct: 410 TAAVWAAILNACSHNLDVSRGEFAAKNLLELEPNKPGNYVLLSNFYAAVGRWDSVNELRS 469
Query: 562 LMEERSLRKNPGYSFL 577
+M ++ L K G S++
Sbjct: 470 IMRKKGLVKETGNSWV 485
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 171/349 (48%), Gaps = 13/349 (3%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HA I G ++ T ++ Y+K G + S+ + F+ + ++VV+W M+S + ++G
Sbjct: 62 VHALAIKTGSDTPTVTKTALMDMYSKYGQLGSSVRVFEEVGFKDVVTWNTMLSSFVRHGR 121
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFVKS 170
E AL VF M + GV ++FT S L+AC ++ Q G+ + + GR + + + +
Sbjct: 122 PEEALAVFREMQKEGVWLSEFTLCSLLKACTLLKAFQQGKQVHALVVVMGR--DLVVLGT 179
Query: 171 ALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
AL+D Y I +A +F + +KD V N++I G ++F ++ M+
Sbjct: 180 ALIDFYTNVECIGEAMEIFHNLNWKKDDVMRNSLISGCVRNRRYKEAF-----LIMSAMR 234
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
P+ + S L A +L QIH + ++ G +L L+D+YAK G I +A L
Sbjct: 235 PNVVAVTSALAACSKNSDLWVGKQIHCVAMRFGFTFDTQLCNVLLDMYAKCGKILNARSL 294
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI--DDVILCLMLNICANV 347
+ M K D++S T++I + + H EA LFK M + I + V +L+ CA+
Sbjct: 295 FDRMDKKDVVSWTSMIDAYG-NHGHGLEALKLFKKMEGEGNSILPNLVTFLAVLSACAHS 353
Query: 348 ASLNLGRQ-IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEM 395
+ G++ + KY ID+ ++G+I + R F+ M
Sbjct: 354 GMVEQGQECFNLIQKKYSLDPGPEHYACFIDILGRAGQIEEVWRLFNNM 402
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 139/281 (49%), Gaps = 10/281 (3%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L T SLL+ C KA +Q +HA ++ G + + L T +I FY V + A +
Sbjct: 139 LSEFTLCSLLKACTLLKAFQQGKQVHALVVVMGRDLVV-LGTALIDFYTNVECIGEAMEI 197
Query: 88 FDRMP-ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
F + +++ V ++ISG +N + A L+ SAM R N +SAL AC++
Sbjct: 198 FHNLNWKKDDVMRNSLISGCVRNRRYKEAFLIMSAM-----RPNVVAVTSALAACSKNSD 252
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
L G+ I + F + + + LLD+YAKCG I +A LF+R+++KDVVSW +MI
Sbjct: 253 LWVGKQIHCVAMRFGFTFDTQLCNVLLDMYAKCGKILNARSLFDRMDKKDVVSWTSMIDA 312
Query: 207 LAMQGFNDDSFWLFRSMMRQG--MKPDCFTLGSILRASVGGIELMKISQIHDLI-IKLGL 263
G ++ LF+ M +G + P+ T ++L A + + + +LI K L
Sbjct: 313 YGNHGHGLEALKLFKKMEGEGNSILPNLVTFLAVLSACAHSGMVEQGQECFNLIQKKYSL 372
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
+ + ID+ + G I ++L+ +M+K A+
Sbjct: 373 DPGPEHYACFIDILGRAGQIEEVWRLFNNMIKNQTKPTAAV 413
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 181/583 (31%), Positives = 298/583 (51%), Gaps = 71/583 (12%)
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSA 121
+ N+ ++ YAK G + AR F MPER+ VSWT M+ G + G A+ +F
Sbjct: 93 QRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLD 152
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
M+ G+ QFT ++ L +CA GR + + K + V +++L++Y KCG
Sbjct: 153 MVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGD 212
Query: 182 IEDAWILFERIERKDV-------------------------------VSWNAMIGGLAMQ 210
E A +FER+ + V VSWNA+I G
Sbjct: 213 AETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQN 272
Query: 211 GFNDDSFWLFRSMMR-QGMKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGLESSN 267
G N + W F M+ M PD FT+ S+L A ++G + + K Q+H I++ +
Sbjct: 273 GLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGK--QVHAYILRSRMPYIG 330
Query: 268 KLTGSLIDVYAKYGSI---------------------------------RSAYQLYRSML 294
++T +LI +YAK GS+ + A +++ M
Sbjct: 331 QVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMS 390
Query: 295 KTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGR 354
D+++ TA+I G+ ++ H+ EA +LF+ MI + + +L++CA++A L G+
Sbjct: 391 NRDVVAWTAMIVGYEQN-GHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGK 449
Query: 355 QIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKH 413
QIH A + ++V N+++ MYA+SG + A R FD + K ++WTS+I A+H
Sbjct: 450 QIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQH 509
Query: 414 GYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEH 473
G G +A+ L+++M G+ P+ +TF+ +L AC+H G EG F + +K+ I+P H
Sbjct: 510 GLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSH 569
Query: 474 FSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDME 533
++C+VDL AR G A I+QM ++P A W ++L AC ++ N L ELAA L ++
Sbjct: 570 YACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSID 629
Query: 534 PEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSF 576
P S Y LSN+Y+A G W++A K K +++S++K G+S+
Sbjct: 630 PGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSW 672
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/477 (26%), Positives = 226/477 (47%), Gaps = 75/477 (15%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ G+ +A+K L L P+ T ++L C +A +H+ ++ G S +
Sbjct: 139 RVGRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVP 198
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNV------------------------------ 96
++ V+ Y K GD +AR F+RMPER+V
Sbjct: 199 VANSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRT 258
Query: 97 -VSWTAMISGYAQNGYDENALLVFSAMLR-SGVRANQFTYSSALRACARMRWLQGGRMIQ 154
VSW A+I+GY QNG + AL FS ML S + ++FT +S L ACA + + G+ +
Sbjct: 259 IVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVH 318
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDA-----------------------WI---- 187
I + R V +AL+ +YAK G +E+A ++
Sbjct: 319 AYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGD 378
Query: 188 ------LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR- 240
+F+ + +DVV+W AMI G G ND++ LFR M+R G +P+ +T+ ++L
Sbjct: 379 MKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSV 438
Query: 241 -ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY-RSMLKTDI 298
AS+ +E K QIH I+ E S+ ++ S++ +YA+ GS+ A +++ R + +
Sbjct: 439 CASLACLEYGK--QIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKET 496
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG-RQIH 357
++ T++I A+ ++A LF++M+ + D + +L+ C +V ++ G R
Sbjct: 497 VTWTSMIVALAQ-HGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQ 555
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKH 413
K+ + + ++D+ A++G ++A +M + + I+W SL++ H
Sbjct: 556 QLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVH 612
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 95/210 (45%), Gaps = 19/210 (9%)
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA-----DANRAFDE 394
+L C A+ GR IHA A K A + N L+ YA +A R FDE
Sbjct: 29 LLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLFDE 88
Query: 395 M--GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTC 452
+ +NV +W SL++ YAK G +A ++ +M + V++ ++ + G
Sbjct: 89 IPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPER----DPVSWTVMVVGLNRVGRFG 144
Query: 453 EGWELFTDMINKYRILPRAEHFSCVVDLFA---RRGQLESAYNMIRQMNIKPTASLWSAI 509
E ++F DM+ + P + V+ A RG ++ + ++ + + +++
Sbjct: 145 EAIKMFLDMVTD-GLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSV 203
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSVN 539
L ++YG E AR +F+ PE+SV+
Sbjct: 204 L---NMYGKCGDAE-TARAVFERMPERSVS 229
>gi|356540347|ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 753
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 177/571 (30%), Positives = 304/571 (53%), Gaps = 4/571 (0%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K G+L+Q +F ++ ++P +Y L + C A L H + SN
Sbjct: 57 KQGKLRQVHEFIRNMDIAGISINPRSYEYLFKMCGTLGALSDGKLFHNRL-QRMANSNKF 115
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ ++ Y +A + FD++ +R++ SW +IS Y + G + A+ +F ML G
Sbjct: 116 IDNCILQMYCDCKSFTAAERFFDKIVDRDLSSWATIISAYTEEGRIDEAVGLFLRMLDLG 175
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
+ N +S+ + + A L G+ I + + F ++ +++ + ++Y KCGW++ A
Sbjct: 176 IIPNFSIFSTLIMSFADPSMLDLGKQIHSQLIRIEFAADISIETLISNMYVKCGWLDGAE 235
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+ ++ RK V+ ++ G N D+ LF M+ +G++ D F IL+A
Sbjct: 236 VATNKMTRKSAVACTGLMVGYTQAARNRDALLLFSKMISEGVELDGFVFSIILKACAALG 295
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
+L QIH IKLGLES + L+D Y K +A Q + S+ + + S +ALI+
Sbjct: 296 DLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIA 355
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
G+ + + A ++FK + K + ++ I + C+ V+ L G QIHA A K
Sbjct: 356 GYCQSGKFDR-ALEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLV 414
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
+ +A+I MY+K G++ A++AF + + ++WT++I +A HG EA+ L+K+M
Sbjct: 415 AYLSGESAMITMYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEM 474
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
+ G+ PN VTF+ LL ACSH+GL EG + M +KY + P +H++C++D+++R G
Sbjct: 475 QGSGVRPNVVTFIGLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGL 534
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
L A +IR M +P W ++LG C N +G +AA N+F ++P S YV++ N+
Sbjct: 535 LLEALEVIRSMPFEPDVMSWKSLLGGCWSRRNLEIGMIAADNIFRLDPLDSATYVIMFNL 594
Query: 547 YTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
Y AG WD A + RK+M ER+LRK S++
Sbjct: 595 YALAGKWDEAAQFRKMMAERNLRKEVSCSWI 625
>gi|222625199|gb|EEE59331.1| hypothetical protein OsJ_11408 [Oryza sativa Japonica Group]
Length = 691
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 179/516 (34%), Positives = 282/516 (54%), Gaps = 1/516 (0%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
++L+ I A A +H+ G++ N + + +I Y+ V A F+ + +
Sbjct: 167 TMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRK 226
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
+ V WTAM+S Y++N ENA VFS M SG + N F +S L+A + + G+ I
Sbjct: 227 DAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIH 286
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND 214
G K V ALLD+YAKCG I+DA + FE I DV+ + MI A N+
Sbjct: 287 GCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNE 346
Query: 215 DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLI 274
+F LF +MR + P+ ++L S+L+A ++L QIH+ IK+G ES + +L+
Sbjct: 347 QAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALM 406
Query: 275 DVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD 334
D YAK + S+ +++ S+ + +S ++ GF++ +EA +F +M +M
Sbjct: 407 DFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQS-GLGEEALSVFCEMQAAQMPCTQ 465
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE 394
V +L CA+ AS+ QIH K + D +GN+LID YAK G I DA + F
Sbjct: 466 VTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQH 525
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG 454
+ ++++ISW ++I+GYA HG +A+EL+ +M + ND+TF++LL CS TGL G
Sbjct: 526 LMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHG 585
Query: 455 WELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACS 514
LF M + I P EH++C+V L R G+L A I + P+A +W A+L +C
Sbjct: 586 LSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCI 645
Query: 515 IYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAA 550
I+ N +LG +A + ++EP+ YV+LSN+Y AA
Sbjct: 646 IHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAA 681
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 155/524 (29%), Positives = 264/524 (50%), Gaps = 18/524 (3%)
Query: 37 LQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIF--YAKVGDVLSARKAFDRMPER 94
LQ CI + R +H H++ G L L ++ Y K+G + SAR+ FDRMPER
Sbjct: 66 LQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPER 125
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM--RWLQGGRM 152
N+VS+ ++ +AQ G E A +F + G NQF ++ L+ M L GG
Sbjct: 126 NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGG-- 183
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF 212
+ K N FV S L+D Y+ C + DA +F I RKD V W AM+ +
Sbjct: 184 VHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDC 243
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS 272
+++F +F M G KP+ F L S+L+A+V ++ IH IK ++ + G+
Sbjct: 244 PENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGA 303
Query: 273 LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI 332
L+D+YAK G I+ A + + D+I + +IS +A+ N +++AF+LF ++ +
Sbjct: 304 LLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQ-SNQNEQAFELFLRLMRSSVLP 362
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAF 392
++ L +L C N+ L+ G+QIH A K D VGNAL+D YAK ++ + + F
Sbjct: 363 NEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIF 422
Query: 393 DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTC 452
+ D N +SW +++ G+++ G G EA+ ++ +M+ M VT+ S+L AC+ T
Sbjct: 423 SSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIR 482
Query: 453 EGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
++ I K + ++D +A+ G + A + + + + S W+AI+
Sbjct: 483 HAGQIHCS-IEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIIS-WNAIISG 540
Query: 513 CSIYGNTSLGELAARNLFDMEPEKSV-----NYVVLSNIYTAAG 551
+++G + A LFD + +V +V L ++ ++ G
Sbjct: 541 YALHGQAA----DALELFDRMNKSNVESNDITFVALLSVCSSTG 580
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
TY S+L+ C + R A IH I + + ++ + +I YAK G + A K F +
Sbjct: 467 TYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHL 526
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA 142
ER+++SW A+ISGYA +G +AL +F M +S V +N T+ + L C+
Sbjct: 527 MERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCS 577
>gi|15226737|ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40720
gi|330254774|gb|AEC09868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 184/559 (32%), Positives = 301/559 (53%), Gaps = 5/559 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L +++ L C + IH ++ G ++ ++ T ++ Y+K G V A
Sbjct: 270 LVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETV 329
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F + ++ + W AM++ YA+N Y +AL +F M + V + FT S+ + C+ +
Sbjct: 330 FSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLY 389
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ + + K ++SALL LY+KCG DA+++F+ +E KD+V+W ++I GL
Sbjct: 390 NYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGL 449
Query: 208 AMQGFNDDSFWLFRSMMRQ--GMKPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLGLE 264
G ++ +F M +KPD + S+ A G+E ++ Q+H +IK GL
Sbjct: 450 CKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNA-CAGLEALRFGLQVHGSMIKTGLV 508
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ + SLID+Y+K G A +++ SM ++++ ++IS ++R+ N + + DLF
Sbjct: 509 LNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRN-NLPELSIDLFNL 567
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M+ + + D V + +L ++ ASL G+ +H + + D + NALIDMY K G
Sbjct: 568 MLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGF 627
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
A F +M K++I+W +I GY HG A+ L+ +MK G P+DVTFLSL+ A
Sbjct: 628 SKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISA 687
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
C+H+G EG +F M Y I P EH++ +VDL R G LE AY+ I+ M I+ +S
Sbjct: 688 CNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSS 747
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
+W +L A + N LG L+A L MEPE+ YV L N+Y AG + A K LM+
Sbjct: 748 IWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMK 807
Query: 565 ERSLRKNPGYSFLQSSKKN 583
E+ L K PG S+++ S +
Sbjct: 808 EKGLHKQPGCSWIEVSDRT 826
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 142/533 (26%), Positives = 269/533 (50%), Gaps = 27/533 (5%)
Query: 47 RQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER-NVVSWTAMISG 105
+ IH ++ N +++ L T +I Y K G + A + F + ++ NVV W MI G
Sbjct: 187 EEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVG 246
Query: 106 YAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVEN 165
+ +G E++L ++ + V+ +++ AL AC++ GR I + K +
Sbjct: 247 FGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHND 306
Query: 166 LFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR 225
+V ++LL +Y+KCG + +A +F + K + WNAM+ A + + LF M +
Sbjct: 307 PYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQ 366
Query: 226 QGMKPDCFTLGSILR-ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIR 284
+ + PD FTL +++ SV G+ S +H + K ++S++ + +L+ +Y+K G
Sbjct: 367 KSVLPDSFTLSNVISCCSVLGLYNYGKS-VHAELFKRPIQSTSTIESALLTLYSKCGCDP 425
Query: 285 SAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI--LKKMGIDDVILCLMLN 342
AY +++SM + D+++ +LISG ++ KEA +F DM + D I+ + N
Sbjct: 426 DAYLVFKSMEEKDMVAWGSLISGLCKNGKF-KEALKVFGDMKDDDDSLKPDSDIMTSVTN 484
Query: 343 ICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVIS 402
CA + +L G Q+H K + VG++LID+Y+K G A + F M +N+++
Sbjct: 485 ACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVA 544
Query: 403 WTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI 462
W S+I+ Y+++ +I+L+ M +G+ P+ V+ S+L A S T +G L
Sbjct: 545 WNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSL----- 599
Query: 463 NKYRI---LPRAEHF-SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
+ Y + +P H + ++D++ + G + A N+ ++M K + W+ + IYG
Sbjct: 600 HGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLIT-WNLM-----IYGY 653
Query: 519 TSLGE-LAARNLFDM-----EPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
S G+ + A +LFD E V ++ L + +G + + + M++
Sbjct: 654 GSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQ 706
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 148/549 (26%), Positives = 262/549 (47%), Gaps = 32/549 (5%)
Query: 4 VRANFKTGQLKQAL----KFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
+RA + G+ QAL K S P T+ SLL+ C IH ++
Sbjct: 31 IRALIQKGEYLQALHLYSKHDGSSP-FWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVL 89
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPE-------RNVVSWTAMISGYAQNGYD 112
G+ + ++T ++ Y K G + A + FD + R+V W +MI GY +
Sbjct: 90 GWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRF 149
Query: 113 ENALLVFSAMLRSGVRANQFTYSSALRA-CARMRWL-QGGRMIQGSIQKGRFVENLFVKS 170
+ + F ML GVR + F+ S + C + + G+ I G + + + F+K+
Sbjct: 150 KEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKT 209
Query: 171 ALLDLYAKCGWIEDAWILFERIERK-DVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
AL+D+Y K G DAW +F IE K +VV WN MI G G + S L+ +K
Sbjct: 210 ALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVK 269
Query: 230 --PDCFT--LGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRS 285
FT LG+ ++ G QIH ++K+GL + + SL+ +Y+K G +
Sbjct: 270 LVSTSFTGALGACSQSENSGFG----RQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGE 325
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
A ++ ++ + A+++ +A +D + A DLF M K + D L +++ C+
Sbjct: 326 AETVFSCVVDKRLEIWNAMVAAYAEND-YGYSALDLFGFMRQKSVLPDSFTLSNVISCCS 384
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
+ N G+ +HA FK + + +AL+ +Y+K G DA F M +K++++W S
Sbjct: 385 VLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGS 444
Query: 406 LIAGYAKHGYGHEAIELYKKMK--HEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMIN 463
LI+G K+G EA++++ MK + + P+ S+ AC+ G ++ MI
Sbjct: 445 LISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMI- 503
Query: 464 KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGE 523
K ++ S ++DL+++ G E A + M+ + + W++++ S Y +L E
Sbjct: 504 KTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVA-WNSMI---SCYSRNNLPE 559
Query: 524 LAARNLFDM 532
L+ +LF++
Sbjct: 560 LSI-DLFNL 567
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 143/290 (49%), Gaps = 5/290 (1%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPST--YMSLLQFCIDKKAERQAHLIHAHIITNGYESN 64
K G+ K+ALK + D L P + S+ C +A R +H +I G N
Sbjct: 451 KNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLN 510
Query: 65 LHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLR 124
+ + + +I Y+K G A K F M N+V+W +MIS Y++N E ++ +F+ ML
Sbjct: 511 VFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLS 570
Query: 125 SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIED 184
G+ + + +S L A + L G+ + G + + +K+AL+D+Y KCG+ +
Sbjct: 571 QGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKY 630
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG 244
A +F++++ K +++WN MI G G + LF M + G PD T S++ A
Sbjct: 631 AENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNH 690
Query: 245 GIELMKISQIHDLIIK-LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ + I + + + G+E + + +++D+ + G + AY ++M
Sbjct: 691 SGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAM 740
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 165/381 (43%), Gaps = 47/381 (12%)
Query: 233 FTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRS 292
FT S+L+A L IH ++ LG + SL+++Y K G + A Q++
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 293 MLKT-------DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
++ D+ ++I G+ + KE F+ M++ + D L +++++
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRF-KEGVGCFRRMLVFGVRPDAFSLSIVVSVMC 179
Query: 346 NVASL--NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK-NVIS 402
+ G+QIH F + D+ + ALIDMY K G DA R F E+ DK NV+
Sbjct: 180 KEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVL 239
Query: 403 WTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTD-- 460
W +I G+ G +++LY K+ + +F L ACS + + G ++ D
Sbjct: 240 WNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVV 299
Query: 461 ----------------MINKYRILPRAEH-FSCVVD--------LFARRGQLESAYN--- 492
M +K ++ AE FSCVVD + A + + Y+
Sbjct: 300 KMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALD 359
Query: 493 ---MIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYV--VLSNIY 547
+RQ ++ P + S ++ CS+ G + G+ LF P +S + + L +Y
Sbjct: 360 LFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFK-RPIQSTSTIESALLTLY 418
Query: 548 TAAGAWDNARKTRKLMEERSL 568
+ G +A K MEE+ +
Sbjct: 419 SKCGCDPDAYLVFKSMEEKDM 439
>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
Length = 879
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 177/548 (32%), Positives = 302/548 (55%), Gaps = 15/548 (2%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
L++ C++++ H H+ + + +T ++ FY GD+ A +AF R
Sbjct: 222 LVKLCVEERE-------HDHLHDSSF------ATALVNFYGSCGDLEQAFRAFSRH-RLE 267
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG 155
++ TAMI+ Y Q + AL +F ML GV+ ++ + L AC+ R L+ GRMI G
Sbjct: 268 LILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRMIHG 327
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD 215
+++ RF ++ +AL+++Y KCG +E+A +F ++ +DV+SWN +I + +
Sbjct: 328 FMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPE 387
Query: 216 SFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLID 275
+ L M G+K D + + L L K IH I++ G+++ L +++D
Sbjct: 388 ALHLLHLMQLDGVKADKISFVNALPLCAASEALAKGRMIHSWIVESGIKADVMLDNAILD 447
Query: 276 VYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDV 335
+Y S A +++R+M D +S A+I+ +A S EA LF+ M L D +
Sbjct: 448 MYGSCKSTDDASRVFRAMKARDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVI 507
Query: 336 ILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEM 395
L+ CA ASL G+ +H + + V NA+++MYAKSG + A + F +M
Sbjct: 508 SFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMYAKSGSLVLARKMFGKM 567
Query: 396 GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGW 455
+VISW +I+ +A+HG+ + + +++M HEG +PNDVTF+S++ ACSH GL +G
Sbjct: 568 PLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGV 627
Query: 456 ELFTDMINKY-RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACS 514
+LF +++ + I PRAEH+ C+VDL AR G+L++A I +KP + S +LGA
Sbjct: 628 QLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGASK 687
Query: 515 IYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGY 574
++ + +A +L ++ P++S YVVLSN+Y G D K R+LM E+++RK P +
Sbjct: 688 VHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAF 747
Query: 575 SFLQSSKK 582
S + ++
Sbjct: 748 SSIAVKRR 755
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 146/522 (27%), Positives = 264/522 (50%), Gaps = 10/522 (1%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDP--STYMSLLQFC-IDKKAERQAHLIHAHIITN 59
++RA+ + G +QAL S + P ++++L C D + + IH +
Sbjct: 70 LIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGT 129
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
ES+ ++ST ++ Y K V ARK FD + + VV W AMI+ YAQ + E A+ VF
Sbjct: 130 AMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVF 189
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGR--FVENLFVKSALLDLYA 177
AML GV+A + T+ L AC++++ L+ ++++ +++ + + +AL++ Y
Sbjct: 190 YAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVNFYG 249
Query: 178 KCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGS 237
CG +E A+ F R R +++ AMI + D++ LF+ M+ +G+K D +
Sbjct: 250 SCGDLEQAFRAFSR-HRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMA 308
Query: 238 ILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
+L A G L + IH + ++ + +LI++Y K GS+ A +++RSM D
Sbjct: 309 VLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRD 368
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
+IS +I+ + H EA L M L + D + L +CA +L GR IH
Sbjct: 369 VISWNTIIAAHGQHSQHP-EALHLLHLMQLDGVKADKISFVNALPLCAASEALAKGRMIH 427
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG-YG 416
++ + D + NA++DMY DA+R F M ++ +SW ++I YA
Sbjct: 428 SWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMITAYAAQPRLS 487
Query: 417 HEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSC 476
EA+ L+++M+ G +P+ ++F++ L AC+ EG +L D I + + +
Sbjct: 488 SEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEG-KLLHDRIRETGLESNMTVANA 546
Query: 477 VVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
V++++A+ G L A M +M + P W+ ++ A + +G+
Sbjct: 547 VLNMYAKSGSLVLARKMFGKMPL-PDVISWNGMISAFAQHGH 587
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 133/492 (27%), Positives = 239/492 (48%), Gaps = 25/492 (5%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y LL D ++ +HA I + + + ++ Y G ++ A+ FDRMP
Sbjct: 1 YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC-ARMRWLQGGR 151
++ ++W +I + Q G E AL +F +M GV + + L AC A L+ GR
Sbjct: 61 VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I G ++ + +V + LL +Y KC +EDA +F+ I K VV WNAMI A Q
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQD 180
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDL----IIKLGLES-- 265
++ + +F +M+ +G+K + T +L A S++ DL ++KL +E
Sbjct: 181 HHEQAIQVFYAMLLEGVKAERITFIGVLDAC---------SKLKDLEVAKLVKLCVEERE 231
Query: 266 -----SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFD 320
+ +L++ Y G + A++ + S + ++I TA+I+ + + + EA +
Sbjct: 232 HDHLHDSSFATALVNFYGSCGDLEQAFRAF-SRHRLELILATAMITQYTQRERWD-EALE 289
Query: 321 LFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYA 380
LFK M+L+ + +D + +LN C+ L GR IH F + + GNALI+MY
Sbjct: 290 LFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYG 349
Query: 381 KSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
K G + +A F M ++VISW ++IA + +H EA+ L M+ +G+ + ++F++
Sbjct: 350 KCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVN 409
Query: 441 LLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIK 500
L C+ + +G + I + I + ++D++ + A + R M +
Sbjct: 410 ALPLCAASEALAKG-RMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKAR 468
Query: 501 PTASLWSAILGA 512
S W+A++ A
Sbjct: 469 DQVS-WNAMITA 479
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 183/371 (49%), Gaps = 11/371 (2%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD M++L C + + +IH + ++ +++ +I Y K G + A +
Sbjct: 301 LDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEV 360
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F M R+V+SW +I+ + Q+ AL + M GV+A++ ++ +AL CA L
Sbjct: 361 FRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEAL 420
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
GRMI I + ++ + +A+LD+Y C +DA +F ++ +D VSWNAMI
Sbjct: 421 AKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMITAY 480
Query: 208 AMQG-FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
A Q + ++ LF+ M G PD + + L A L + +HD I + GLES+
Sbjct: 481 AAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESN 540
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ +++++YAK GS+ A +++ M D+IS +IS FA+ H+ + F+ M
Sbjct: 541 MTVANAVLNMYAKSGSLVLARKMFGKMPLPDVISWNGMISAFAQ-HGHADQVLRFFRRMN 599
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQ-----IHAFAFKYQSSYDAAVGNALIDMYAK 381
+ +DV +++ C++ + G Q +H F S A ++D+ A+
Sbjct: 600 HEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFP---TISPRAEHYYCMVDLIAR 656
Query: 382 SGEIADANRAF 392
+G++ DA F
Sbjct: 657 AGKL-DAAEKF 666
>gi|358343602|ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|358344096|ref|XP_003636129.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501824|gb|AES83027.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355502064|gb|AES83267.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 662
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 172/552 (31%), Positives = 306/552 (55%), Gaps = 6/552 (1%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y SL+ C +KK+ +H HI+ +G + K+I Y K + ARK FD MP
Sbjct: 4 YTSLIAQCTNKKSLTTLKSLHTHILKSGSLFSF-FGHKLIDGYIKCSVITEARKLFDEMP 62
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
R++V+W +MIS + G + A+ ++S ML GV + +T+S+ +A + M + G+
Sbjct: 63 NRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQK 122
Query: 153 IQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
G ++ G V + FV + ++D+YAK G ++DA +F+R+ KDVV + A+I G G
Sbjct: 123 AHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHG 182
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI-ELMKISQIHDLIIKLGLESSNKLT 270
+ ++ +F M+ +KP+ +TL S+L S G + +L+ IH L++K GLES
Sbjct: 183 LDGEALEVFEDMVGSRIKPNEYTLASVL-VSCGNLGDLVNGKLIHGLVVKYGLESVVASQ 241
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
SL+ +Y+K + + +++ S+ ++ T+ I G ++ + A +F++M+ +
Sbjct: 242 TSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQN-GREEVALSMFREMMRCSI 300
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
+ L +L+ C+++A L G QIHA K + V ALI +Y K G + A
Sbjct: 301 SPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARS 360
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
FD + + +++S ++I YA++G+GHEA+EL++++K G+ PN VTF+S+L AC++ GL
Sbjct: 361 VFDSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGL 420
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
EG ++F+ + N + I +H++C++DL R + E A +I + P W +L
Sbjct: 421 VEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGK-NPDVIQWRTLL 479
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
AC I+G + E + + D P +++L+NIY +AG WDN + + + L+K
Sbjct: 480 NACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKK 539
Query: 571 NPGYSFLQSSKK 582
P S++ ++
Sbjct: 540 TPAMSWVDIDRE 551
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 222/431 (51%), Gaps = 9/431 (2%)
Query: 2 NIVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
+++ ++ G+ K+A++ ++ L D T+ ++ + + R+ H +
Sbjct: 71 SMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVL 130
Query: 60 GYE-SNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLV 118
G+E S+ ++T ++ YAK G + AR FDR+ +++VV +TA+I GY Q+G D AL V
Sbjct: 131 GFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHGLDGEALEV 190
Query: 119 FSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
F M+ S ++ N++T +S L +C + L G++I G + K + +++LL +Y+K
Sbjct: 191 FEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSK 250
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
C +ED+ +F + V+W + I GL G + + +FR MMR + P+ FTL SI
Sbjct: 251 CNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSI 310
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
L A L QIH + +KLG++ + + +LI +Y K G++ A ++ S+ + DI
Sbjct: 311 LHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDI 370
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCL--MLNICANVASLNLGRQI 356
+S +I +A+ + EA +LF+ LKK+G++ ++ +L C N + G QI
Sbjct: 371 VSINTMIYAYAQ-NGFGHEALELFER--LKKLGLEPNVVTFISILLACNNAGLVEEGCQI 427
Query: 357 HAFAFKYQS-SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGY 415
+ S +ID+ ++ +A +E + +VI W +L+ HG
Sbjct: 428 FSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGKNPDVIQWRTLLNACKIHGE 487
Query: 416 GHEAIELYKKM 426
A + KKM
Sbjct: 488 VEMAEKFMKKM 498
>gi|297728297|ref|NP_001176512.1| Os11g0433100 [Oryza sativa Japonica Group]
gi|62701919|gb|AAX92992.1| hypothetical protein LOC_Os11g24530 [Oryza sativa Japonica Group]
gi|77550326|gb|ABA93123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125534237|gb|EAY80785.1| hypothetical protein OsI_35965 [Oryza sativa Indica Group]
gi|125577016|gb|EAZ18238.1| hypothetical protein OsJ_33779 [Oryza sativa Japonica Group]
gi|255680048|dbj|BAH95240.1| Os11g0433100 [Oryza sativa Japonica Group]
Length = 622
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 187/539 (34%), Positives = 291/539 (53%), Gaps = 48/539 (8%)
Query: 76 AKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYS 135
A G V AR+ FD MP+R+VVSWTAM++ YA+ G + A ++F R R N T++
Sbjct: 52 AAAGRVSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLFD---RPDARRNVVTWT 108
Query: 136 SALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILF------ 189
+ L AR R + ++ +G N+ + +L+ Y G +EDA LF
Sbjct: 109 ALLSGYARARRVDEAE----ALFEGMAERNVVSWNTMLEAYTAVGRVEDASALFNRMPVR 164
Query: 190 -------------------------ERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMM 224
ER+ +DV+SW MI GLA G DD++ LF +M
Sbjct: 165 DAGSWNILLCGLVRSGSLERARKMFERMPVRDVMSWTTMISGLARNGSVDDAWVLFDAMP 224
Query: 225 RQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIR 284
+ + + R +I + DL K+ + +I + + ++
Sbjct: 225 ERNVVSWNAMISGYARNH-------RIEEALDLFTKMPIRDVASWN-IMITGFIQNKDLK 276
Query: 285 SAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNIC 344
SA QL+ M K ++I+ T +++G+ + S+ A LF M+++ + + V L+ C
Sbjct: 277 SARQLFDEMPKRNVITWTTMMNGYLQC-MQSEMALKLFNCMLVQGIQPNQVTFLGSLDAC 335
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWT 404
+N+A+L G+Q+H K S +D V + L+++YAK GEI A FD +K++ISW
Sbjct: 336 SNLAALCEGQQVHQMICKTPSQFDTFVESTLMNLYAKCGEIRLARNVFDFSMEKDLISWN 395
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK 464
+IA YA HG+G EA+ LYK M+ G PND T++ LL ACSH GL EG ++F M+
Sbjct: 396 GIIAAYAHHGFGIEAMHLYKNMQENGYKPNDATYVGLLSACSHAGLVDEGLKIFESMVKD 455
Query: 465 YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS-LWSAILGACSIYGNTSLGE 523
I+ R EH++C+VDL +R G+LE A +I IKPT+S +WSA+LG C+ +GN S+G+
Sbjct: 456 NSIVVRDEHYTCLVDLCSRAGRLEDAKRLISWFKIKPTSSTVWSALLGGCNSHGNESIGD 515
Query: 524 LAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
LAA++L + EP+ + Y +L NIY +AG W A + R M R L+K PG S+++ + K
Sbjct: 516 LAAKHLLEAEPDNAGTYTLLCNIYASAGKWKEAAEIRSEMNVRGLKKQPGCSWIEVANK 574
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 177/397 (44%), Gaps = 46/397 (11%)
Query: 69 TKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR 128
T +I A+ G V A FD MPERNVVSW AMISGYA+N E AL +F+ M V
Sbjct: 201 TTMISGLARNGSVDDAWVLFDAMPERNVVSWNAMISGYARNHRIEEALDLFTKMPIRDVA 260
Query: 129 ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWIL 188
+ MI G F++N +KSA L
Sbjct: 261 SWNI-------------------MITG------FIQNKDLKSARQ--------------L 281
Query: 189 FERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIEL 248
F+ + +++V++W M+ G ++ + LF M+ QG++P+ T L A L
Sbjct: 282 FDEMPKRNVITWTTMMNGYLQCMQSEMALKLFNCMLVQGIQPNQVTFLGSLDACSNLAAL 341
Query: 249 MKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGF 308
+ Q+H +I K + + +L+++YAK G IR A ++ ++ D+IS +I+ +
Sbjct: 342 CEGQQVHQMICKTPSQFDTFVESTLMNLYAKCGEIRLARNVFDFSMEKDLISWNGIIAAY 401
Query: 309 ARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS-SY 367
A EA L+K+M +D +L+ C++ ++ G +I K S
Sbjct: 402 AH-HGFGIEAMHLYKNMQENGYKPNDATYVGLLSACSHAGLVDEGLKIFESMVKDNSIVV 460
Query: 368 DAAVGNALIDMYAKSGEIADANRAFDEMGDKNVIS--WTSLIAGYAKHGYGHEAI-ELYK 424
L+D+ +++G + DA R K S W++L+ G H G+E+I +L
Sbjct: 461 RDEHYTCLVDLCSRAGRLEDAKRLISWFKIKPTSSTVWSALLGGCNSH--GNESIGDLAA 518
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM 461
K E N T+ L + G E E+ ++M
Sbjct: 519 KHLLEAEPDNAGTYTLLCNIYASAGKWKEAAEIRSEM 555
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 146/330 (44%), Gaps = 34/330 (10%)
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQ------------- 108
E N+ +I YA+ + A F +MP R+V SW MI+G+ Q
Sbjct: 225 ERNVVSWNAMISGYARNHRIEEALDLFTKMPIRDVASWNIMITGFIQNKDLKSARQLFDE 284
Query: 109 -------------NGY-----DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
NGY E AL +F+ ML G++ NQ T+ +L AC+ + L G
Sbjct: 285 MPKRNVITWTTMMNGYLQCMQSEMALKLFNCMLVQGIQPNQVTFLGSLDACSNLAALCEG 344
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ + I K + FV+S L++LYAKCG I A +F+ KD++SWN +I A
Sbjct: 345 QQVHQMICKTPSQFDTFVESTLMNLYAKCGEIRLARNVFDFSMEKDLISWNGIIAAYAHH 404
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKL 269
GF ++ L+++M G KP+ T +L A S G+ + ++ + ++
Sbjct: 405 GFGIEAMHLYKNMQENGYKPNDATYVGLLSACSHAGLVDEGLKIFESMVKDNSIVVRDEH 464
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF-DLFKDMILK 328
L+D+ ++ G + A +L S K S T + ++H E+ DL +L+
Sbjct: 465 YTCLVDLCSRAGRLEDAKRLI-SWFKIKPTSSTVWSALLGGCNSHGNESIGDLAAKHLLE 523
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHA 358
+ L+ NI A+ +I +
Sbjct: 524 AEPDNAGTYTLLCNIYASAGKWKEAAEIRS 553
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 90/183 (49%), Gaps = 3/183 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T++ L C + A + +H I + + + + ++ YAK G++ AR FD
Sbjct: 327 TFLGSLDACSNLAALCEGQQVHQMICKTPSQFDTFVESTLMNLYAKCGEIRLARNVFDFS 386
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL-QGG 150
E++++SW +I+ YA +G+ A+ ++ M +G + N TY L AC+ + +G
Sbjct: 387 MEKDLISWNGIIAAYAHHGFGIEAMHLYKNMQENGYKPNDATYVGLLSACSHAGLVDEGL 446
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE--RIERKDVVSWNAMIGGLA 208
++ + ++ V + L+DL ++ G +EDA L +I+ W+A++GG
Sbjct: 447 KIFESMVKDNSIVVRDEHYTCLVDLCSRAGRLEDAKRLISWFKIKPTSSTVWSALLGGCN 506
Query: 209 MQG 211
G
Sbjct: 507 SHG 509
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 187/565 (33%), Positives = 296/565 (52%), Gaps = 8/565 (1%)
Query: 22 SCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIF--YAKVG 79
SC TL D T+ +LL C D + +HA + G+++NL L+ ++ Y +V
Sbjct: 135 SC--TLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVR 192
Query: 80 DVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALR 139
+ A F+ + +++ V++ +I+GY ++G A+ +F M +SG + + FT+S L+
Sbjct: 193 RLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLK 252
Query: 140 ACARMRWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVV 198
A + G+ + G S+ G F + V + +L Y+K + + LF + D V
Sbjct: 253 AVVGLHDFALGQQLHGLSVTTG-FSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFV 311
Query: 199 SWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLI 258
S+N +I + ++S LFR M G F ++L + L Q+H
Sbjct: 312 SYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQA 371
Query: 259 IKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEA 318
I +S + SL+D+YAK A +++S+ + +S TALISG+ + H
Sbjct: 372 IVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGA-G 430
Query: 319 FDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDM 378
LF M + D +L A ASL LG+Q+HAF + + + G+ L+DM
Sbjct: 431 LKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDM 490
Query: 379 YAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTF 438
YAK G I DA + F+EM D+N +SW +LI+ YA +G G AI + KM G+ P+ V+
Sbjct: 491 YAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSI 550
Query: 439 LSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMN 498
L +L ACSH G +G E F M Y I P+ +H++C++DL R G+ A ++ +M
Sbjct: 551 LGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMP 610
Query: 499 IKPTASLWSAILGACSIYGNTSLGELAARNLFDMEP-EKSVNYVVLSNIYTAAGAWDNAR 557
+P +WS++L AC IY N SL E AA LF ME + YV +SNIY AAG W+N R
Sbjct: 611 FEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVR 670
Query: 558 KTRKLMEERSLRKNPGYSFLQSSKK 582
+K M ER ++K P YS+++ + K
Sbjct: 671 HVKKAMRERGIKKVPAYSWVEVNHK 695
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/464 (29%), Positives = 233/464 (50%), Gaps = 13/464 (2%)
Query: 67 LSTKVIIF-YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
+ST +I Y K+GD+ SAR FD MP+R VV+WT ++ YA N + + A +F M RS
Sbjct: 76 VSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRS 135
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLF--VKSALLDLYAKCGWIE 183
+ T+++ L C + K F NLF V + LL Y + ++
Sbjct: 136 CTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLD 195
Query: 184 DAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV 243
A +LFE I KD V++N +I G G ++ LF M + G KP FT +L+A V
Sbjct: 196 LACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVV 255
Query: 244 GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTA 303
G + Q+H L + G + ++ Y+K+ + L+ M + D +S
Sbjct: 256 GLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNV 315
Query: 304 LISGFARDDNHSKEAFDLFKDMILKKMGID--DVILCLMLNICANVASLNLGRQIHAFAF 361
+IS +++ + + +E+ +LF++M + MG D + ML+I AN++SL +GRQ+H A
Sbjct: 316 VISSYSQAEQY-EESLNLFREM--QCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAI 372
Query: 362 KYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIE 421
+ VGN+L+DMYAK +A F + ++ +SWT+LI+GY + G ++
Sbjct: 373 VATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLK 432
Query: 422 LYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLF 481
L+ KM+ + + TF ++L A + G +L +I L S +VD++
Sbjct: 433 LFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGN-LENVFSGSGLVDMY 491
Query: 482 ARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
A+ G ++ A + +M + S W+A++ A Y + GE A
Sbjct: 492 AKCGSIKDAVQVFEEMPDRNAVS-WNALISA---YADNGDGEAA 531
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 166/353 (47%), Gaps = 13/353 (3%)
Query: 164 ENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM 223
+N + ++ Y K G + A LF+ + + VV+W ++G A D++F LFR M
Sbjct: 73 KNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQM 132
Query: 224 MRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT--GSLIDVYAKYG 281
R PD T ++L + + Q+H +KLG +++ LT L+ Y +
Sbjct: 133 CRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVR 192
Query: 282 SIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLML 341
+ A L+ +L D ++ LI+G+ +D ++ EA LF M D +L
Sbjct: 193 RLDLACVLFEEILDKDSVTFNTLITGYEKDGLYT-EAIHLFLKMRQSGHKPSDFTFSGVL 251
Query: 342 NICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVI 401
+ LG+Q+H + S DA+VGN ++ Y+K + + F+EM + + +
Sbjct: 252 KAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFV 311
Query: 402 SWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM 461
S+ +I+ Y++ E++ L+++M+ G + F ++L ++ G +
Sbjct: 312 SYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQ----- 366
Query: 462 INKYRILPRAEHF----SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
++ I+ A+ + +VD++A+ + A + + ++ + T S W+A++
Sbjct: 367 VHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVS-WTALI 418
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 31/124 (25%)
Query: 354 RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKH 413
R++ A K + D N ++ + G+++ A + +DEM KN +S ++I+GY K
Sbjct: 29 RRVDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKM 88
Query: 414 G-------------------------------YGHEAIELYKKMKHEGMVPNDVTFLSLL 442
G + EA +L+++M +P+ VTF +LL
Sbjct: 89 GDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLL 148
Query: 443 FACS 446
C+
Sbjct: 149 PGCN 152
>gi|302796685|ref|XP_002980104.1| hypothetical protein SELMODRAFT_111910 [Selaginella moellendorffii]
gi|300152331|gb|EFJ18974.1| hypothetical protein SELMODRAFT_111910 [Selaginella moellendorffii]
Length = 623
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 178/534 (33%), Positives = 285/534 (53%), Gaps = 5/534 (0%)
Query: 15 QALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIF 74
+ LKF + T + T++SLL C IH + G E+++ ++
Sbjct: 89 ELLKF-MDLEGTEANKITFISLLGACSVTGDLSLGKKIHERVRAKGLETDIITGNALLNM 147
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
Y + AR F+RM R+VVSWT +IS YA GY AL ++ M + R + T
Sbjct: 148 YTTCDSLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPDAVTL 207
Query: 135 SSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER 194
S L ACA +R L G+ I I ++FV +A++ Y KC ++DA +F+RI
Sbjct: 208 ISVLEACASLRTLVEGKTIHERIVASGVETDVFVGTAVVSFYGKCEAVDDARQVFDRIMD 267
Query: 195 KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQI 254
KD+V WNAMIG A + +F L+ M+ M+P+ TL ++L + ++ + S +
Sbjct: 268 KDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMRPNDVTLITLLDSCSSTCKMERGSSL 327
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY--RSMLKTDIISCTALISGFARDD 312
H G S + +LI++YAK GS+ +A +++ + T++I+ +I A++D
Sbjct: 328 HREAAARGYLSHTSVVNALINMYAKCGSLENATRVFIEATNRTTNVITWNTMIVANAQED 387
Query: 313 NHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG 372
+ EA ++ M + + DV +L +CAN GR++H+ + D V
Sbjct: 388 -LNLEALQIYHRMNQEGIKASDVTYGTVLAVCANFGDFTTGREVHSRSLATGCCSDV-VQ 445
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
N+LI +Y G + A AF+ + KNV+SW+S++A YA++G A L+ M +G++
Sbjct: 446 NSLICLYGGCGNLEAAQTAFESVASKNVVSWSSIVAAYARNGEEDRARNLFWTMNQDGVL 505
Query: 433 PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYN 492
PN VTF S+L ACSH GL EGW F M + + P EH+ C+V+L A+ G+++ A +
Sbjct: 506 PNIVTFTSVLHACSHAGLADEGWSYFLSMQGDHHLEPTPEHYGCMVNLLAKSGRVKQAAS 565
Query: 493 MIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
+ M ++P AS W ++LGAC ++ + G LAA+ L D EP S YV+L NI
Sbjct: 566 FMSAMPVQPDASAWRSLLGACEVHTDKEYGALAAKQLLDAEPRNSAAYVLLYNI 619
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 152/510 (29%), Positives = 259/510 (50%), Gaps = 28/510 (5%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
TY +LL+ + K+ +H+ +I+NG + + +L ++ Y + G + AR AF +
Sbjct: 4 TYEALLKQYGNSKSLADGRRVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFRGI 63
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
+RNV SWT +IS QNG L + M G AN+ T+ S L AC+ L G+
Sbjct: 64 HQRNVFSWTILISLLVQNGEASEGLELLKFMDLEGTEANKITFISLLGACSVTGDLSLGK 123
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I ++ ++ +ALL++Y C +++A ++FER+ +DVVSW +I A G
Sbjct: 124 KIHERVRAKGLETDIITGNALLNMYTTCDSLDEARLVFERMVFRDVVSWTIIISAYAHAG 183
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
+ ++ L+R M ++ +PD TL S+L A L++ IH+ I+ G+E+ +
Sbjct: 184 YPLEALQLYRRMEQEFSRPDAVTLISVLEACASLRTLVEGKTIHERIVASGVETDVFVGT 243
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKE-AFDLFKDMILKKM 330
+++ Y K ++ A Q++ ++ DI+ A+I +A+ NH +E AF L+ +M+ +M
Sbjct: 244 AVVSFYGKCEAVDDARQVFDRIMDKDIVCWNAMIGAYAQ--NHCEEKAFALYLEMVENQM 301
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
+DV L +L+ C++ + G +H A +V NALI+MYAK G + +A R
Sbjct: 302 RPNDVTLITLLDSCSSTCKMERGSSLHREAAARGYLSHTSVVNALINMYAKCGSLENATR 361
Query: 391 AFDEMGDK--NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
F E ++ NVI+W ++I A+ EA+++Y +M EG+ +DVT+ ++L C++
Sbjct: 362 VFIEATNRTTNVITWNTMIVANAQEDLNLEALQIYHRMNQEGIKASDVTYGTVLAVCAN- 420
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVD--------LFARRGQLESAYNMIRQMNIK 500
F D + R+ C D L+ G LE+A + K
Sbjct: 421 ---------FGDFTTGREVHSRSLATGCCSDVVQNSLICLYGGCGNLEAAQTAFESVASK 471
Query: 501 PTASLWSAILGACSIYGNTSLGELAARNLF 530
S WS+I+ A + G E ARNLF
Sbjct: 472 NVVS-WSSIVAAYARNGE----EDRARNLF 496
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 190/570 (33%), Positives = 312/570 (54%), Gaps = 16/570 (2%)
Query: 19 FSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYA 76
FSL + L P T+ S+L+ C + + IH + G+ +++++ +I Y+
Sbjct: 140 FSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYS 196
Query: 77 KVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA-NQFTYS 135
+ V +AR FD MP R++ SW AMISGY Q+G + AL L +G+RA + T
Sbjct: 197 RYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL-----TLSNGLRAMDSVTVV 251
Query: 136 SALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERK 195
S L AC G I K LFV + L+DLYA+ G + D +F+R+ +
Sbjct: 252 SLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR 311
Query: 196 DVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI--LRASVGGIELMKISQ 253
D++SWN++I + + LF+ M ++PDC TL S+ + + +G I + Q
Sbjct: 312 DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQ 371
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN 313
L LE + +++ +YAK G + SA ++ + TD+IS +ISG+A++
Sbjct: 372 GFTLRKGWFLEDIT-IGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQN-G 429
Query: 314 HSKEAFDLFKDMILK-KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG 372
+ EA +++ M + ++ + +L C+ +L G ++H K D V
Sbjct: 430 FASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVV 489
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
+L DMY K G + DA F ++ N + W +LIA + HG+G +A+ L+K+M EG+
Sbjct: 490 TSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVK 549
Query: 433 PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYN 492
P+ +TF++LL ACSH+GL EG F M Y I P +H+ C+VD++ R GQLE+A
Sbjct: 550 PDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALK 609
Query: 493 MIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGA 552
I+ M+++P AS+W A+L AC ++GN LG++A+ +LF++EPE +V+LSN+Y +AG
Sbjct: 610 FIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGK 669
Query: 553 WDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
W+ + R + + LRK PG+S ++ K
Sbjct: 670 WEGVDEIRSIAHGKGLRKTPGWSSMEVDNK 699
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 148/536 (27%), Positives = 281/536 (52%), Gaps = 21/536 (3%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
+L ++C + ++ A +HA ++ + N+ +S K++ Y +G+V AR FD + R
Sbjct: 59 TLFRYCTNLQS---AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR 115
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSA-MLRSGVRANQFTYSSALRACARMRWLQGGRMI 153
+V +W MISGY + G + FS ML SG+ + T+ S L+AC R + G I
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKI 172
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN 213
K F+ +++V ++L+ LY++ + +A ILF+ + +D+ SWNAMI G G
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNA 232
Query: 214 DDSFWLFRSMMRQGMKP-DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS 272
++ + G++ D T+ S+L A + + IH IK GLES ++
Sbjct: 233 KEAL-----TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNK 287
Query: 273 LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI 332
LID+YA++G +R +++ M D+IS ++I + ++ + A LF++M L ++
Sbjct: 288 LIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLR-AISLFQEMRLSRIQP 346
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAF-KYQSSYDAAVGNALIDMYAKSGEIADANRA 391
D + L + +I + + + R + F K D +GNA++ MYAK G + A
Sbjct: 347 DCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAV 406
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG-MVPNDVTFLSLLFACSHTGL 450
F+ + + +VISW ++I+GYA++G+ EAIE+Y M+ EG + N T++S+L ACS G
Sbjct: 407 FNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGA 466
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
+G +L ++ K + + + D++ + G+LE A ++ Q+ + + W+ ++
Sbjct: 467 LRQGMKLHGRLL-KNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLI 524
Query: 511 GACSIYGNTSLGELAARNLFD--MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
+G+ + + + D ++P+ + +V L + + +G D + ++M+
Sbjct: 525 ACHGFHGHGEKAVMLFKEMLDEGVKPDH-ITFVTLLSACSHSGLVDEGQWCFEMMQ 579
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 211/416 (50%), Gaps = 19/416 (4%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLS 68
++G K+AL +LS +D T +SLL C + + IH++ I +G ES L +S
Sbjct: 228 QSGNAKEAL--TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVS 285
Query: 69 TKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR 128
K+I YA+ G + +K FDRM R+++SW ++I Y N A+ +F M S ++
Sbjct: 286 NKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQ 345
Query: 129 ANQFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWI 187
+ T S +++ ++ R +QG +++KG F+E++ + +A++ +YAK G ++ A
Sbjct: 346 PDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARA 405
Query: 188 LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG-MKPDCFTLGSILRASVGGI 246
+F + DV+SWN +I G A GF ++ ++ M +G + + T S+L A
Sbjct: 406 VFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAG 465
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
L + ++H ++K GL + SL D+Y K G + A L+ + + + + LI+
Sbjct: 466 ALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIA 525
Query: 307 --GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK-Y 363
GF H ++A LFK+M+ + + D + +L+ C++ ++ G+ + F+
Sbjct: 526 CHGF---HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQ----WCFEMM 578
Query: 364 QSSYDAAVG----NALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHG 414
Q+ Y ++DMY ++G++ A + M + W +L++ HG
Sbjct: 579 QTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHG 634
>gi|28564593|dbj|BAC57760.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50509708|dbj|BAD31746.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 703
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 176/515 (34%), Positives = 285/515 (55%), Gaps = 36/515 (6%)
Query: 97 VSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGS 156
+ + +IS ++G AL + M ++GV + FTY S LRACA R L GR +
Sbjct: 139 LPYNVLISSCLRHGLPLQALAAYQEMGKNGVLPDVFTYPSVLRACAEARELVLGRAVHMH 198
Query: 157 IQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDS 216
NLF ++AL+ +YAKCG + A +F+ + ++DVVSWN+MI A G ++
Sbjct: 199 AAGAGMDGNLFFQNALMSMYAKCGDLASARKVFDGMVQRDVVSWNSMISSYAAVGQWAEA 258
Query: 217 FWLFRSMMRQGMKPDCFTLGSI---------LRASV--------GGIELMKIS------- 252
LFR M +G + + T +I RA+V GG E+ ++
Sbjct: 259 MELFRRMRDEGTEVNSVTWNTIAGGYIQMRDYRAAVGLIREMVRGGAEVDYVTLVIGLNA 318
Query: 253 -----------QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC 301
+IH L +++ + ++ +LI +YA+ + A L+R + +++
Sbjct: 319 CSRVGWLRLGKEIHGLAVRMCCDQVESVSNALITMYARCKDMECARMLFRMLECPGVVTW 378
Query: 302 TALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF 361
++S FA D ++EA +F++MI + + + V + L +CA VA+L G+++H
Sbjct: 379 NTMLSSFALSDC-AEEASSIFREMICRGVKPNYVTVVTYLALCARVANLQHGQELHGHIV 437
Query: 362 KYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIE 421
K+ + N+LIDMY+KSG ++ A FD M D ++IS+TS+IAGY G G A+
Sbjct: 438 KHGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDCDMISYTSMIAGYGMQGKGTVALR 497
Query: 422 LYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLF 481
L+++M G+ P+ + +++L ACSH+GL EG ELF M+ Y I P+ EH+SC++DL+
Sbjct: 498 LFEQMIDSGIKPDHIIMVTVLSACSHSGLVLEGEELFNKMVISYGIKPQMEHYSCMIDLY 557
Query: 482 ARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYV 541
AR G LE A M+ PT+++W+A++GAC GN +GE AAR L +M E + +YV
Sbjct: 558 ARAGLLEKAEEMLDHTPFPPTSTMWAALVGACHDRGNIEIGERAARKLLEMRTENAGHYV 617
Query: 542 VLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSF 576
+++N+Y AAG WD RKLM + + K PG ++
Sbjct: 618 LIANMYAAAGCWDELATVRKLMRDLGVTKAPGLAW 652
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 196/426 (46%), Gaps = 38/426 (8%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
L D TY S+L+ C + + +H H G + NL ++ YAK GD+ SAR
Sbjct: 169 VLPDVFTYPSVLRACAEARELVLGRAVHMHAAGAGMDGNLFFQNALMSMYAKCGDLASAR 228
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSS--------- 136
K FD M +R+VVSW +MIS YA G A+ +F M G N T+++
Sbjct: 229 KVFDGMVQRDVVSWNSMISSYAAVGQWAEAMELFRRMRDEGTEVNSVTWNTIAGGYIQMR 288
Query: 137 --------------------------ALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
L AC+R+ WL+ G+ I G + + V +
Sbjct: 289 DYRAAVGLIREMVRGGAEVDYVTLVIGLNACSRVGWLRLGKEIHGLAVRMCCDQVESVSN 348
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
AL+ +YA+C +E A +LF +E VV+WN M+ A+ +++ +FR M+ +G+KP
Sbjct: 349 ALITMYARCKDMECARMLFRMLECPGVVTWNTMLSSFALSDCAEEASSIFREMICRGVKP 408
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
+ T+ + L L ++H I+K G + L SLID+Y+K G + A ++
Sbjct: 409 NYVTVVTYLALCARVANLQHGQELHGHIVKHGFKGYRLLWNSLIDMYSKSGRLSVAQNVF 468
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
+M D+IS T++I+G+ + A LF+ MI + D +I+ +L+ C++ +
Sbjct: 469 DTMDDCDMISYTSMIAGYGMQGKGTV-ALRLFEQMIDSGIKPDHIIMVTVLSACSHSGLV 527
Query: 351 NLGRQI-HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIA 408
G ++ + Y + +ID+YA++G + A D W +L+
Sbjct: 528 LEGEELFNKMVISYGIKPQMEHYSCMIDLYARAGLLEKAEEMLDHTPFPPTSTMWAALVG 587
Query: 409 GYAKHG 414
G
Sbjct: 588 ACHDRG 593
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 91/187 (48%), Gaps = 4/187 (2%)
Query: 253 QIHDLIIKLGLESSNKLTGSLIDVYAKYGS-IRSAYQLYRSMLKTDIISCTALISGFARD 311
Q+H L + LGL L L+ VY + S + SA + T + LIS R
Sbjct: 94 QLHALSLSLGLSRHPILLPRLLSVYTSHPSLLPSAASVAAD--STLPLPYNVLISSCLR- 150
Query: 312 DNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAV 371
+A +++M + D +L CA L LGR +H A +
Sbjct: 151 HGLPLQALAAYQEMGKNGVLPDVFTYPSVLRACAEARELVLGRAVHMHAAGAGMDGNLFF 210
Query: 372 GNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGM 431
NAL+ MYAK G++A A + FD M ++V+SW S+I+ YA G EA+EL+++M+ EG
Sbjct: 211 QNALMSMYAKCGDLASARKVFDGMVQRDVVSWNSMISSYAAVGQWAEAMELFRRMRDEGT 270
Query: 432 VPNDVTF 438
N VT+
Sbjct: 271 EVNSVTW 277
>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 765
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/571 (30%), Positives = 307/571 (53%), Gaps = 4/571 (0%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K G L++ +F ++ ++P +Y L + C A L H + SN
Sbjct: 69 KQGNLREVHEFIRNMDKVGISINPRSYEYLFKMCGTLGALSDGKLFHNRL-QRMANSNKF 127
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ ++ Y SA + FD++ ++++ SW+ +IS Y + G + A+ +F ML G
Sbjct: 128 IDNCILKMYCDCKSFTSAERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLRMLDLG 187
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
+ N +S+ + + L G+ I + + F N+ +++ + ++Y KCGW++ A
Sbjct: 188 ITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVKCGWLDGAE 247
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+ ++ RK+ V+ ++ G N D+ LF M+ +G++ D F IL+A
Sbjct: 248 VATNKMTRKNAVACTGLMVGYTKAARNRDALLLFGKMISEGVELDGFVFSIILKACAALG 307
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
+L QIH IKLGLES + L+D Y K +A Q + S+ + + S +ALI+
Sbjct: 308 DLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIA 367
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
G+ + + A ++FK + K + ++ I + C+ V+ L G QIHA A K
Sbjct: 368 GYCQSGQFDR-ALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGLV 426
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
+ +A+I MY+K G++ A++AF + + ++WT++I +A HG EA+ L+K+M
Sbjct: 427 AYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEM 486
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
+ G+ PN VTF+ LL ACSH+GL EG ++ M ++Y + P +H++C++D+++R G
Sbjct: 487 QGSGVRPNAVTFIGLLNACSHSGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGL 546
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
L+ A +IR + +P W ++LG C + N +G +AA N+F ++P S YV++ N+
Sbjct: 547 LQEALEVIRSLPFEPDVMSWKSLLGGCWSHRNLEIGMIAADNIFRLDPLDSATYVIMFNL 606
Query: 547 YTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
Y AG WD A + RK+M ER+LRK S++
Sbjct: 607 YALAGKWDEAAQFRKMMAERNLRKEVSCSWI 637
>gi|297838697|ref|XP_002887230.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
lyrata]
gi|297333071|gb|EFH63489.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
lyrata]
Length = 1347
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 178/557 (31%), Positives = 304/557 (54%), Gaps = 9/557 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T +S+++ C + R A +H I ++ + L ++ Y+K GD+LS+ K F
Sbjct: 759 DAVTMISVVEGCAELGCLRIARSVHGQITRKMFDFDETLCNSLLTMYSKCGDLLSSEKIF 818
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+++ ++N VSWTAMIS Y + + E AL FS ML+SG+ N T S L +C ++
Sbjct: 819 EKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMLKSGIEPNLVTLYSILSSCGLNGLIR 878
Query: 149 GGRMIQGSIQKGRFVENL-FVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ + G + N + AL++LYA+CG + D + + +++V WN+ I
Sbjct: 879 EGKSVHGFAIRRELDPNYESLSPALVELYAECGRLGDCETILHVVGDRNIVLWNSHISLY 938
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGLES 265
A +G ++ LFR M+ +KPD FTL SI+ A + G + L K QIH +I+ + S
Sbjct: 939 AHRGMVIEALCLFRQMVTWRIKPDSFTLASIISACENTGLVRLGK--QIHGHVIRTDV-S 995
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ S+ID+Y+K G + A ++ + I++ +++ GF+++ N S EA +LF M
Sbjct: 996 DEFVQNSVIDMYSKSGFVNLACTVFDQIKHRSIVTWNSMLCGFSQNGN-SLEAINLFDYM 1054
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ I+ V ++ C+++ SL GR +H D ALIDMYAK G++
Sbjct: 1055 YHSCLEINKVTFLAVIQACSSIGSLEKGRWVH-HKLIVCGIKDLFTDTALIDMYAKCGDL 1113
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A F M +++++SW+S+I Y HG AI + +M G PN+V F+++L AC
Sbjct: 1114 NTAETVFRAMSNRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSAC 1173
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
H+G EG + + +++ + + P +EHF+C +DL +R G L+ AY I++M AS+
Sbjct: 1174 GHSGSVEEG-KYYFNLMKLFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASV 1232
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
W +++ C I+ + + ++ D+ + + Y +LSNIY G W+ R+ R M+
Sbjct: 1233 WGSLVNGCRIHQKMDIIKAIKNDISDIVTDDTGYYTLLSNIYAEEGEWEEFRRMRSAMKS 1292
Query: 566 RSLRKNPGYSFLQSSKK 582
+L+K PGYS ++ KK
Sbjct: 1293 LNLKKVPGYSAIEIDKK 1309
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 153/541 (28%), Positives = 278/541 (51%), Gaps = 47/541 (8%)
Query: 32 TYMSLLQFCIDKKAERQAHL-----IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
+ S+L+ C A + HL +H II +G + + + T ++ Y + G++ A K
Sbjct: 660 VFPSVLRAC----AGSREHLSVGRKVHGRIIKSGVDDDAVIETSLLCMYGQTGNLSDAEK 715
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FD MP R++V+W+ ++S +N AL +F M+ GV + T S + CA +
Sbjct: 716 VFDGMPVRDLVAWSTLVSSCLENCEVLKALRMFKCMVDDGVEPDAVTMISVVEGCAELGC 775
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
L+ R + G I + F + + ++LL +Y+KCG + + +FE+I +K+ VSW AMI
Sbjct: 776 LRIARSVHGQITRKMFDFDETLCNSLLTMYSKCGDLLSSEKIFEKIAKKNAVSWTAMISS 835
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLES 265
F++ + F M++ G++P+ TL SIL +S G L++ + +H I+ L+
Sbjct: 836 YNRGEFSEKALRSFSEMLKSGIEPNLVTLYSIL-SSCGLNGLIREGKSVHGFAIRRELDP 894
Query: 266 S-NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ L+ +L+++YA+ G + + + +I+ + IS +A EA LF+
Sbjct: 895 NYESLSPALVELYAECGRLGDCETILHVVGDRNIVLWNSHISLYAH-RGMVIEALCLFRQ 953
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M+ ++ D L +++ C N + LG+QIH + S D V N++IDMY+KSG
Sbjct: 954 MVTWRIKPDSFTLASIISACENTGLVRLGKQIHGHVIRTDVS-DEFVQNSVIDMYSKSGF 1012
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ A FD++ +++++W S++ G++++G EAI L+ M H + N VTFL+++ A
Sbjct: 1013 VNLACTVFDQIKHRSIVTWNSMLCGFSQNGNSLEAINLFDYMYHSCLEINKVTFLAVIQA 1072
Query: 445 CSHTG------------LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYN 492
CS G + C +LFTD + ++D++A+ G L +A
Sbjct: 1073 CSSIGSLEKGRWVHHKLIVCGIKDLFTD--------------TALIDMYAKCGDLNTAET 1118
Query: 493 MIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD--MEPEKSVNYVVLSNIYTAA 550
+ R M+ + S WS+++ A ++G +A + F+ +E N VV N+ +A
Sbjct: 1119 VFRAMSNRSIVS-WSSMINAYGMHGRIG----SAISTFNQMVESGTKPNEVVFMNVLSAC 1173
Query: 551 G 551
G
Sbjct: 1174 G 1174
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 133/520 (25%), Positives = 262/520 (50%), Gaps = 31/520 (5%)
Query: 27 LLDPST-------YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLS-TKVIIFYAKV 78
++DP T YM L + C + R +HAH++ G L TK+I YA +
Sbjct: 549 IVDPRTKYLKMTQYMPLFRSC---SSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFM 605
Query: 79 GDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSAL 138
G S+R F+ P + + +I + A+ ++ ++ + ++F + S L
Sbjct: 606 GSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSEKTQISKFVFPSVL 665
Query: 139 RACARMR-WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDV 197
RACA R L GR + G I K ++ ++++LL +Y + G + DA +F+ + +D+
Sbjct: 666 RACAGSREHLSVGRKVHGRIIKSGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDL 725
Query: 198 VSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIH 255
V+W+ ++ + +F+ M+ G++PD T+ S++ A +G + + + +H
Sbjct: 726 VAWSTLVSSCLENCEVLKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIAR--SVH 783
Query: 256 DLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHS 315
I + + L SL+ +Y+K G + S+ +++ + K + +S TA+IS + R + S
Sbjct: 784 GQITRKMFDFDETLCNSLLTMYSKCGDLLSSEKIFEKIAKKNAVSWTAMISSYNRGE-FS 842
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ--SSYDAAVGN 373
++A F +M+ + + V L +L+ C + G+ +H FA + + +Y+ ++
Sbjct: 843 EKALRSFSEMLKSGIEPNLVTLYSILSSCGLNGLIREGKSVHGFAIRRELDPNYE-SLSP 901
Query: 374 ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP 433
AL+++YA+ G + D +GD+N++ W S I+ YA G EA+ L+++M + P
Sbjct: 902 ALVELYAECGRLGDCETILHVVGDRNIVLWNSHISLYAHRGMVIEALCLFRQMVTWRIKP 961
Query: 434 NDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF--SCVVDLFARRGQLESAY 491
+ T S++ AC +TGL G ++ +I ++ F + V+D++++ G + A
Sbjct: 962 DSFTLASIISACENTGLVRLGKQIHGHVIRT----DVSDEFVQNSVIDMYSKSGFVNLAC 1017
Query: 492 NMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
+ Q+ + + W+++L S GN+ L A NLFD
Sbjct: 1018 TVFDQIKHRSIVT-WNSMLCGFSQNGNS----LEAINLFD 1052
>gi|225450995|ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240 [Vitis vinifera]
Length = 565
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 170/558 (30%), Positives = 313/558 (56%), Gaps = 14/558 (2%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIF--YAKVGDVLSARKAF 88
++ +SLL+ C K + +H +IT ++ ++++ F Y+ G++ A+ F
Sbjct: 6 NSILSLLEKC---KTMAELKRLHGLMITTSVIQDVIPLSRLVDFCAYSDSGNLNYAKSVF 62
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+++ ++ W +MI GY+ + + AL ++ M + G + FT+ L+AC+ +
Sbjct: 63 NQIDRPSLYIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGYN 122
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ + I K F +++ +ALL +YA CG +E A +F+ I + +VV+W ++I G
Sbjct: 123 LGQCVHNCIVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAGCI 182
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES--S 266
++ +++ M + P+ T+ ++L A +L +HD ++GL+ S
Sbjct: 183 SNDCPSEAVRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQMGLDPFQS 242
Query: 267 NK-----LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDL 321
N L +++D+YAK GS+++A L+ M ++++ ++I + + + EA DL
Sbjct: 243 NSNFNVILATAIVDMYAKCGSLKTARDLFNKMPHRNLVAWNSMIGAYNQY-GQANEALDL 301
Query: 322 FKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
F DM + D ++ CA++ +L G+ +HA+ K + D A+G AL+DMYAK
Sbjct: 302 FSDMRIAGFDPDKATFLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTALVDMYAK 361
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE-GMVPNDVTFLS 440
SG+ A + F E+ K+V +WTSLI G A HG+G EA+ +KKM+ + ++P+++T++
Sbjct: 362 SGDAERAQQVFSELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEITYIG 421
Query: 441 LLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIK 500
+L ACSH G +G F M N + I P +H+ C+VDL +R G+L A ++ +M ++
Sbjct: 422 VLSACSHVGKVEDGKNHFISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEAERLVEKMPVE 481
Query: 501 PTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTR 560
P ++WSA+L C IY N + + R + ++E + S YV+LSNIY A W+ + R
Sbjct: 482 PNTAIWSALLNGCKIYQNIDVADRVRRRVRELEVDGSGVYVLLSNIYAGACRWEEVKMAR 541
Query: 561 KLMEERSLRKNPGYSFLQ 578
+LM+ER ++K+ G+S ++
Sbjct: 542 ELMKERKIQKSLGHSSVE 559
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 196/392 (50%), Gaps = 13/392 (3%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ +L+ C +H I+ G+E +++ +T ++ YA GD+ +A K F
Sbjct: 104 DHFTFPFVLKACSLVNGYNLGQCVHNCIVKTGFEVDVYAATALLQMYAACGDMEAALKVF 163
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D +P+ NVV+WT++I+G N A+ V+ M V N+ T + L ACAR R L
Sbjct: 164 DDIPKWNVVAWTSLIAGCISNDCPSEAVRVYKDMELWSVAPNEITMVNVLVACARSRDLN 223
Query: 149 GGRMIQ---GSIQKGRFVE----NLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN 201
GR + G + F N+ + +A++D+YAKCG ++ A LF ++ +++V+WN
Sbjct: 224 AGRWVHDRTGQMGLDPFQSNSNFNVILATAIVDMYAKCGSLKTARDLFNKMPHRNLVAWN 283
Query: 202 AMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKL 261
+MIG G +++ LF M G PD T ++ A L+ +H + K
Sbjct: 284 SMIGAYNQYGQANEALDLFSDMRIAGFDPDKATFLCVIGACAHLGALVSGQALHAYVSKT 343
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDL 321
L + +L+D+YAK G A Q++ + K D+ + T+LI G A H +EA
Sbjct: 344 NLTDDTAIGTALVDMYAKSGDAERAQQVFSELQKKDVTAWTSLIIGLAM-HGHGEEALTF 402
Query: 322 FKDMILKKMGIDDVILCL-MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN--ALIDM 378
FK M I D I + +L+ C++V + G+ H + K + + ++D+
Sbjct: 403 FKKMQEDTALIPDEITYIGVLSACSHVGKVEDGKN-HFISMKNVHGIEPTTQHYGCMVDL 461
Query: 379 YAKSGEIADANRAFDEMG-DKNVISWTSLIAG 409
+++G + +A R ++M + N W++L+ G
Sbjct: 462 LSRAGRLGEAERLVEKMPVEPNTAIWSALLNG 493
>gi|357155523|ref|XP_003577148.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Brachypodium distachyon]
Length = 735
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 183/555 (32%), Positives = 297/555 (53%), Gaps = 7/555 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY+S ++ C+ +H +I N +E + + ++ Y + G A F
Sbjct: 182 DMFTYVSAVKACLITGESDFGRQLHGCVIHNMFEPDTSVMNVLVDMYFRAGLKDVAMAVF 241
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
R+ ++ +SW +ISG+A + D L F+ M RSG + N+ T S LR CA
Sbjct: 242 RRILRKDTISWNTVISGFAHDEDDREVLGCFADMSRSGCKPNEVTLSVMLRLCAAKENAS 301
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G I G + EN+ V +A++++ ++CG + A F + +++V+WN MI G
Sbjct: 302 LGLQIFGLAYCHGYSENVLVANAVINMLSRCGLLNSADGFFCNLRFRNIVTWNEMIAGYG 361
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
+ +++D+ LFRSM+ G +PD FT ++L A E Q+H I+K G+ S
Sbjct: 362 LYSYSEDAMRLFRSMVCFGERPDEFTYSAVLSAFQEAHEPRNHEQVHASILKQGITSRQF 421
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD--DNHSKEAFDLFKDMI 326
++ SLI A +GS++SA ++ K D++S +IS F + +N FDLF+
Sbjct: 422 VSTSLIKAKAVFGSVQSALKIMEDTGKMDLVSWGVVISAFLKHGLNNEVMSLFDLFRGDS 481
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ + D+ IL +LN CAN A L R++H+ + S V +AL+D YAK G IA
Sbjct: 482 MNR--ADEFILATVLNACANAALLRQCRRVHSLVIRTGHSNHFCVASALVDAYAKCGGIA 539
Query: 387 DANRAFDEM--GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
A AF ++ G + I + +++ YA HG +EA+ LY+ M +VP TF++L+ A
Sbjct: 540 SAKSAFADVSSGSGDAILYNTMLTAYANHGLINEALSLYEDMARAQLVPTPATFVALVSA 599
Query: 445 CSHTGLTCEGWELFTDMIN-KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
CS+ GL +G LF+ M++ ++ I P +++ +VDL AR+G L A ++I M + P
Sbjct: 600 CSNFGLVEQGKILFSLMLSEEHGIHPTRANYATLVDLLARKGFLHEAKDIIEVMPLHPWP 659
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
S+W +++ C I+GN LG LAA + M P YV LSN++ G W A + RK+M
Sbjct: 660 SVWRSLMNGCRIHGNMELGVLAAEQILSMTPSSDGAYVSLSNVFADDGEWHLAEEARKMM 719
Query: 564 EERSLRKNPGYSFLQ 578
E +RK YS ++
Sbjct: 720 AENQVRKVHAYSRIE 734
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/394 (31%), Positives = 206/394 (52%), Gaps = 6/394 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HA ++ G + + ++I Y++ G + +A FD MP RN+VSWTAM+SG A+ G
Sbjct: 6 LHAQLLKLGMSGDTFTANHLLIAYSRTGLLKNALGVFDEMPHRNLVSWTAMVSGSARGGA 65
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMR-WLQGGRMIQGSIQKGRFVENLFVKS 170
+ L +F +M+RSG N+F +SALRA A L+ G + G K + F S
Sbjct: 66 SQLGLGLFVSMVRSGFLPNEFALASALRATASCHDGLRLGLSLHGVAVKVGVGGDPFAGS 125
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
+LL +YA G + DA F + R+D+ WNAM+ G G ++ M R
Sbjct: 126 SLLLMYANHGRVADAEGAFAEVRRRDLACWNAMLEGYVSNGCGHEAMRAVVLMRR----C 181
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
D FT S ++A + E Q+H +I E + L+D+Y + G A ++
Sbjct: 182 DMFTYVSAVKACLITGESDFGRQLHGCVIHNMFEPDTSVMNVLVDMYFRAGLKDVAMAVF 241
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
R +L+ D IS +ISGFA D++ +E F DM ++V L +ML +CA +
Sbjct: 242 RRILRKDTISWNTVISGFAHDED-DREVLGCFADMSRSGCKPNEVTLSVMLRLCAAKENA 300
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
+LG QI A+ + S + V NA+I+M ++ G + A+ F + +N+++W +IAGY
Sbjct: 301 SLGLQIFGLAYCHGYSENVLVANAVINMLSRCGLLNSADGFFCNLRFRNIVTWNEMIAGY 360
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ Y +A+ L++ M G P++ T+ ++L A
Sbjct: 361 GLYSYSEDAMRLFRSMVCFGERPDEFTYSAVLSA 394
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 129/263 (49%), Gaps = 8/263 (3%)
Query: 249 MKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGF 308
M S +H ++KLG+ L+ Y++ G +++A ++ M +++S TA++SG
Sbjct: 1 MPPSHLHAQLLKLGMSGDTFTANHLLIAYSRTGLLKNALGVFDEMPHRNLVSWTAMVSGS 60
Query: 309 ARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA-SLNLGRQIHAFAFKYQSSY 367
AR S+ LF M+ ++ L L A+ L LG +H A K
Sbjct: 61 AR-GGASQLGLGLFVSMVRSGFLPNEFALASALRATASCHDGLRLGLSLHGVAVKVGVGG 119
Query: 368 DAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMK 427
D G++L+ MYA G +ADA AF E+ +++ W +++ GY +G GHEA+ M+
Sbjct: 120 DPFAGSSLLLMYANHGRVADAEGAFAEVRRRDLACWNAMLEGYVSNGCGHEAMRAVVLMR 179
Query: 428 HEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQL 487
M T++S + AC TG + G +L +I+ P + +VD++ R G
Sbjct: 180 RCDM----FTYVSAVKACLITGESDFGRQLHGCVIHNM-FEPDTSVMNVLVDMYFRAGLK 234
Query: 488 ESAYNMIRQMNIKPTASLWSAIL 510
+ A + R++ K T S W+ ++
Sbjct: 235 DVAMAVFRRILRKDTIS-WNTVI 256
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 128/280 (45%), Gaps = 7/280 (2%)
Query: 20 SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVG 79
S+ C D TY ++L + R +HA I+ G S +ST +I A G
Sbjct: 375 SMVCFGERPDEFTYSAVLSAFQEAHEPRNHEQVHASILKQGITSRQFVSTSLIKAKAVFG 434
Query: 80 DVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLR--SGVRANQFTYSSA 137
V SA K + + ++VSW +IS + ++G + + +F + R S RA++F ++
Sbjct: 435 SVQSALKIMEDTGKMDLVSWGVVISAFLKHGLNNEVMSLFD-LFRGDSMNRADEFILATV 493
Query: 138 LRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE--RK 195
L ACA L+ R + + + + V SAL+D YAKCG I A F +
Sbjct: 494 LNACANAALLRQCRRVHSLVIRTGHSNHFCVASALVDAYAKCGGIASAKSAFADVSSGSG 553
Query: 196 DVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA--SVGGIELMKISQ 253
D + +N M+ A G +++ L+ M R + P T +++ A + G +E KI
Sbjct: 554 DAILYNTMLTAYANHGLINEALSLYEDMARAQLVPTPATFVALVSACSNFGLVEQGKILF 613
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
L + G+ + +L+D+ A+ G + A + M
Sbjct: 614 SLMLSEEHGIHPTRANYATLVDLLARKGFLHEAKDIIEVM 653
>gi|119638439|gb|ABL85030.1| hypothetical protein 57h21.3 [Brachypodium sylvaticum]
Length = 618
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 181/538 (33%), Positives = 287/538 (53%), Gaps = 47/538 (8%)
Query: 76 AKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYS 135
A G V AR+ FDR P+R+VVSWTA+++ YA+ G +A +F R R N T++
Sbjct: 46 AAAGRVSDARRLFDRTPDRDVVSWTALVAAYARQGMLHDARALFD---RPDARRNVVTWT 102
Query: 136 SALRACARMRWLQGGRMIQGSIQKGRFVE-NLFVKSALLDLYAKCGWIEDAWILFERIER 194
+ L AR GR+ + R E N+ + +L+ Y G + DAW LF+ +
Sbjct: 103 ALLSGYAR-----AGRVDEAEALFQRMPERNVVSWNTMLEAYTSAGRVRDAWTLFDGMPV 157
Query: 195 KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQI 254
+D SWN ++ L G D + LF M + + + I R+ G ++ + +
Sbjct: 158 RDAGSWNILLAALVRSGNMDKARKLFDRMPERNVMAWTTMVAGIARS--GSVD--EARAL 213
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN- 313
D + + + S N ++I YA+ I A+ L+ M DI S +I+GF +D +
Sbjct: 214 FDGMPERNVVSWN----AMISGYARNHRIDEAHDLFMKMPTRDIASWNIMITGFIQDRDL 269
Query: 314 -----------------------------HSKEAFDLFKDMILKKMGIDDVILCLMLNIC 344
S+ A +F M+++ + + V ++ C
Sbjct: 270 ERAQDLFDKMPRRNVITWTTMMNGYLQSMQSETALQIFNGMLVEGIRPNQVTFLGAVDAC 329
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWT 404
+N+A L+ G+Q+H K +D + + L+++YAK GEI A + FD +K+VISW
Sbjct: 330 SNLAGLSEGQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVFDLSKEKDVISWN 389
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK 464
+IA YA HG G EAI LY+KM+ +G PNDVT++ LL ACSH+GL EG +F M+
Sbjct: 390 GMIAAYAHHGVGVEAIHLYEKMQEKGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKD 449
Query: 465 YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGEL 524
I R EH++C++DL +R G+L A +I + ++P++++W+A+LG C+ +GN S+G+L
Sbjct: 450 RSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGDL 509
Query: 525 AARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
AARNL + EP + Y +L NIY +AG W A K R M +R L+K PG S+++ K
Sbjct: 510 AARNLLEAEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGLKKQPGCSWIEVENK 567
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 161/355 (45%), Gaps = 42/355 (11%)
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSA 121
E N+ T ++ A+ G V AR FD MPERNVVSW AMISGYA+N + A +F
Sbjct: 188 ERNVMAWTTMVAGIARSGSVDEARALFDGMPERNVVSWNAMISGYARNHRIDEAHDLFMK 247
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
M + + MI G IQ
Sbjct: 248 MPTRDIASWNI-------------------MITGFIQDRD-------------------- 268
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
+E A LF+++ R++V++W M+ G ++ + +F M+ +G++P+ T + A
Sbjct: 269 LERAQDLFDKMPRRNVITWTTMMNGYLQSMQSETALQIFNGMLVEGIRPNQVTFLGAVDA 328
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC 301
L + Q+H +I K + + +L+++YAK G IR A +++ + D+IS
Sbjct: 329 CSNLAGLSEGQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVFDLSKEKDVISW 388
Query: 302 TALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF 361
+I+ +A EA L++ M K +DV +L+ C++ ++ G +I +
Sbjct: 389 NGMIAAYAH-HGVGVEAIHLYEKMQEKGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMV 447
Query: 362 KYQS-SYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHG 414
K +S + LID+ +++G + DA R + + + W +L+ G HG
Sbjct: 448 KDRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGGCNSHG 502
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 91/186 (48%), Gaps = 10/186 (5%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T++ + C + + +H I ++ + + + ++ YAK G++ ARK FD
Sbjct: 321 TFLGAVDACSNLAGLSEGQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVFDLS 380
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
E++V+SW MI+ YA +G A+ ++ M G + N TY L AC+ + G
Sbjct: 381 KEKDVISWNGMIAAYAHHGVGVEAIHLYEKMQEKGYKPNDVTYVGLLSACSHSGLVDEGL 440
Query: 152 MIQGSIQKGRFVENLFVK----SALLDLYAKCGWIEDA--WILFERIERKDVVSWNAMIG 205
I + K R ++ V+ + L+DL ++ G + DA I F ++E V WNA++G
Sbjct: 441 RIFEYMVKDR---SIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTV-WNALLG 496
Query: 206 GLAMQG 211
G G
Sbjct: 497 GCNSHG 502
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 20/218 (9%)
Query: 358 AFAFKYQSSYDAAVG------NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
A AF Y S+ V N + A +G ++DA R FD D++V+SWT+L+A YA
Sbjct: 18 AAAFFYDSAAAVDVSGHVQDPNRRVAELAAAGRVSDARRLFDRTPDRDVVSWTALVAAYA 77
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
+ G H+A L+ + N VT+ +LL + G E LF M + +
Sbjct: 78 RQGMLHDARALFDRPDAR---RNVVTWTALLSGYARAGRVDEAEALFQRMPERNVV---- 130
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
++ +++ + G++ A+ + M ++ S W+ +L A GN AR LFD
Sbjct: 131 -SWNTMLEAYTSAGRVRDAWTLFDGMPVRDAGS-WNILLAALVRSGNMD----KARKLFD 184
Query: 532 MEPEKSV-NYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
PE++V + + +G+ D AR M ER++
Sbjct: 185 RMPERNVMAWTTMVAGIARSGSVDEARALFDGMPERNV 222
>gi|297820962|ref|XP_002878364.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324202|gb|EFH54623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 767
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 190/578 (32%), Positives = 296/578 (51%), Gaps = 57/578 (9%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K+G +A + P+ Y S+L+ C + IH H I G++ +++
Sbjct: 103 KSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLLLLLRGEQIHGHTIKTGFDLDVN 162
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMP-ERNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
+ ++ YA+ + A FD M E+N V+WT+M++GY+QNG+ A+ F + R
Sbjct: 163 VVNGLLAMYAQCKRISEAEYLFDTMAGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRRD 222
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
G ++NQ+T+ S L ACA + + G + G I K F N++V+SAL+D+YAKC +E A
Sbjct: 223 GNQSNQYTFPSVLTACASVSACRVGVQVHGCIVKSGFKTNIYVQSALIDMYAKCRDLESA 282
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGG 245
L E +E DVVSWN+MI G QG +++ +F M + MK D FT+ SIL
Sbjct: 283 RALLEGMEVDDVVSWNSMIVGCVRQGLIEEALSMFGRMHERDMKIDDFTIPSILNCFASS 342
Query: 246 IELMKI-SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
MKI S H LI+K G+ +LT G + SA +++ M++ D+IS TAL
Sbjct: 343 RTEMKIASSAHCLIVKPGM----RLTS--------LGIMDSALKVFEGMIEKDVISWTAL 390
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
++G + + +EA LF +M + + D ++ +L+ A + L G+Q+H K
Sbjct: 391 VTGNTHNGFY-EEALKLFCNMRVGGIYPDQIVTASVLSASAELTLLEFGQQVHGNYIKSG 449
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
+V N+L+ MY K G + DAN F+ M +++I+WT +I
Sbjct: 450 FPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCII----------------- 492
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
GL E F M Y I P EH++C++DLF R
Sbjct: 493 -----------------------VGLIEEAQRYFDSMRTVYGITPGPEHYACMIDLFGRS 529
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLS 544
G A ++ QM ++P A++W AIL A +GN GE AA+ L +EP +V YV+LS
Sbjct: 530 GDFVKAEELLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMKLEPNNAVPYVLLS 589
Query: 545 NIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
N+Y+AAG D A R+LM+ R++ K PG S+++ K
Sbjct: 590 NMYSAAGRQDEAANVRRLMKSRNINKEPGCSWVEEKGK 627
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 147/285 (51%), Gaps = 4/285 (1%)
Query: 167 FVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ 226
F + ++ Y+ + DA LF K+ +SWNA+I G G ++F LF M
Sbjct: 61 FTWNTMIVAYSNSRRLADAEQLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSD 120
Query: 227 GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSA 286
G+KP+ +TLGS+LR + L++ QIH IK G + + L+ +YA+ I A
Sbjct: 121 GIKPNEYTLGSVLRMCTSLLLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEA 180
Query: 287 YQLYRSML-KTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
L+ +M + + ++ T++++G+++ + + +A + F+D+ + +L CA
Sbjct: 181 EYLFDTMAGEKNNVTWTSMLTGYSQ-NGFAFKAIECFRDLRRDGNQSNQYTFPSVLTACA 239
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
+V++ +G Q+H K + V +ALIDMYAK ++ A + M +V+SW S
Sbjct: 240 SVSACRVGVQVHGCIVKSGFKTNIYVQSALIDMYAKCRDLESARALLEGMEVDDVVSWNS 299
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL--FACSHT 448
+I G + G EA+ ++ +M M +D T S+L FA S T
Sbjct: 300 MIVGCVRQGLIEEALSMFGRMHERDMKIDDFTIPSILNCFASSRT 344
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 51/102 (50%)
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
F D N +I Y+ S +ADA + F KN ISW +LI+GY K G EA
Sbjct: 52 FDKMPERDEFTWNTMIVAYSNSRRLADAEQLFRSNPVKNTISWNALISGYCKSGSKVEAF 111
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI 462
L+ +M+ +G+ PN+ T S+L C+ L G ++ I
Sbjct: 112 NLFWEMQSDGIKPNEYTLGSVLRMCTSLLLLLRGEQIHGHTI 153
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 184/586 (31%), Positives = 297/586 (50%), Gaps = 69/586 (11%)
Query: 64 NLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML 123
N+ ++ +AK G + AR F MPER+ VSWT M+ G + G A+ M
Sbjct: 97 NVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMT 156
Query: 124 RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIE 183
G QFT ++ L +CA + GR + + K + V +++L++Y KCG E
Sbjct: 157 ADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAE 216
Query: 184 DAWILFERIERKDV-------------------------------VSWNAMIGGLAMQGF 212
A +FER+ + V VSWNAMI G G
Sbjct: 217 TASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGL 276
Query: 213 NDDSFWLFRSMMRQG-MKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGLESSNKL 269
+ + LF M+ + M PD FT+ S+L A ++G + + K Q+H I++ + ++++
Sbjct: 277 DAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGK--QVHAYILRTEMAYNSQV 334
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTD--IISCTALISGFAR----------------- 310
T +LI YAK GS+ +A ++ ++TD +IS TAL+ G+ +
Sbjct: 335 TNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNR 394
Query: 311 -------------DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
+ + EA DLF+ MI + L +L++CA++A L+ G+QIH
Sbjct: 395 DVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIH 454
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHGYG 416
A + ++V NA+I MYA+SG A R FD++ K I+WTS+I A+HG G
Sbjct: 455 CRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQG 514
Query: 417 HEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSC 476
EA+ L+++M G+ P+ +T++ +L ACSH G EG + + N+++I P H++C
Sbjct: 515 EEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYAC 574
Query: 477 VVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEK 536
+VDL AR G A IR+M ++P A W ++L AC ++ N L ELAA L ++P
Sbjct: 575 MVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNN 634
Query: 537 SVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
S Y ++N+Y+A G W +A + K +E+++RK G+S+ K
Sbjct: 635 SGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSK 680
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 126/477 (26%), Positives = 227/477 (47%), Gaps = 75/477 (15%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ G+ +A+K L P+ T ++L C +A +H+ ++ G S +
Sbjct: 141 RAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVP 200
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNV------------------------------ 96
++ V+ Y K GD +A F+RMP R+V
Sbjct: 201 VANSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRS 260
Query: 97 -VSWTAMISGYAQNGYDENALLVFSAML-RSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
VSW AMI+GY QNG D AL +FS ML S + ++FT +S L ACA + ++ G+ +
Sbjct: 261 IVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVH 320
Query: 155 -------------------------GSIQKGRFVE--------NLFVKSALLDLYAKCGW 181
GS++ R + N+ +ALL+ Y K G
Sbjct: 321 AYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGD 380
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR- 240
+E A +F + +DVV+W AMI G G ND++ LFRSM+ G +P+ +TL ++L
Sbjct: 381 MESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSV 440
Query: 241 -ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML-KTDI 298
AS+ ++ K QIH I+ LE S+ ++ ++I +YA+ GS A +++ + + +
Sbjct: 441 CASLACLDYGK--QIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKET 498
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH- 357
I+ T++I A+ +EA LF++M+ + D + +L+ C++ +N G++ +
Sbjct: 499 ITWTSMIVALAQ-HGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYD 557
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKH 413
++Q + + + ++D+ A++G ++A M + + I+W SL++ H
Sbjct: 558 QIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVH 614
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 107/239 (44%), Gaps = 49/239 (20%)
Query: 340 MLNICANVASLNLGRQIHAFAFK----------------YQSSYDAAVG----------- 372
+L +C A+ GR IHA A K Y + A G
Sbjct: 32 LLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEI 91
Query: 373 ----------NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIEL 422
N+L+ M+AKSG +ADA F EM +++ +SWT ++ G + G EAI+
Sbjct: 92 PLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKT 151
Query: 423 YKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWEL--FTDMINKYRILPRAEHFSCVVDL 480
M +G P T ++L +C+ T G ++ F + +P A + V+++
Sbjct: 152 LLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVA---NSVLNM 208
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGEL-AARNLFDMEPEKSV 538
+ + G E+A + +M ++ +S W+A++ NT LG + A +LF+ P +S+
Sbjct: 209 YGKCGDAETASTVFERMPVRSVSS-WNAMVSL-----NTHLGRMDLAESLFESMPGRSI 261
>gi|302817788|ref|XP_002990569.1| hypothetical protein SELMODRAFT_131810 [Selaginella moellendorffii]
gi|300141737|gb|EFJ08446.1| hypothetical protein SELMODRAFT_131810 [Selaginella moellendorffii]
Length = 564
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 168/516 (32%), Positives = 281/516 (54%), Gaps = 12/516 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+++ C + + H+ + +G ES+L L + ++ Y + G ARK F
Sbjct: 58 DRVTFVTAATACSLVGSLEEGKQFHSRFVESGLESSLILDSALMNMYGRCGSAEEARKIF 117
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
DR+P +NVV W MI+ YAQNG+ AL ++ M ++ ++ T+ + L AC L+
Sbjct: 118 DRIPVKNVVCWNVMIAAYAQNGHFSEALELYYDM---NLKPDRVTFLNVLHACT----LE 170
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
GR+I + + FV +AL++++ KCG + DA +F+RI +DV+SWNA++
Sbjct: 171 SGRLIHQDVVSAGLERDKFVGNALVNMFGKCGSLSDAKRVFDRIAFRDVISWNALMSVYI 230
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
QG ++F LF+ M + G++P+ T S+L A L ++ +IH + GLE +
Sbjct: 231 QQGHRKEAFELFKRMDKAGLQPNSVTYLSLLPACSS---LEQLREIHQELADQGLEQDEQ 287
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +LI Y K+ S+ + ++ M + ++S T +I G + + A DL+++M+++
Sbjct: 288 VGNTLITAYNKF-SLEDSVAVFERMKRRSVVSWTCMIMGMV-EHGYGGRALDLYREMVVE 345
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ D V L L+ C +V +L GR+IH D V A+++MY K G+ A+A
Sbjct: 346 GVRPDAVALVCALDACTSVENLAEGRKIHRLVEGTTMVTDVFVATAVVNMYGKCGKFAEA 405
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
F M V +W SLI YA+HG+ +A++LY++M+ G P+ VT L LFACSH
Sbjct: 406 EAVFQGMKTTTVATWNSLIGAYAQHGHATDALKLYERMELSGTRPDGVTLLCALFACSHL 465
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
GL E ++ M+ Y++ HF C+VDLF R G ++ A +I M ++P S W+A
Sbjct: 466 GLLDRAREFYSGMVEDYQVEAVPAHFGCLVDLFCRAGWIDEAEELIASMPVRPHISAWTA 525
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLS 544
+L AC + + G AA +++ +S +VVLS
Sbjct: 526 LLNACKAHNDMERGAWAACKAHELDSRRSSPFVVLS 561
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 132/447 (29%), Positives = 229/447 (51%), Gaps = 15/447 (3%)
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLR-SGVRANQFT 133
Y K G V AR F+ + + SW M+ Y NG + AL +F M+ G+RA++ T
Sbjct: 2 YGKCGSVEEARAVFNSIKRSSCFSWNLMLGAYCNNGSGDQALELFKQMVDVHGIRADRVT 61
Query: 134 YSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE 193
+ +A AC+ + L+ G+ + +L + SAL+++Y +CG E+A +F+RI
Sbjct: 62 FVTAATACSLVGSLEEGKQFHSRFVESGLESSLILDSALMNMYGRCGSAEEARKIFDRIP 121
Query: 194 RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ 253
K+VV WN MI A G ++ L+ M +KPD T ++L A L
Sbjct: 122 VKNVVCWNVMIAAYAQNGHFSEALELYYDM---NLKPDRVTFLNVLHACT----LESGRL 174
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN 313
IH ++ GLE + +L++++ K GS+ A +++ + D+IS AL+S + +
Sbjct: 175 IHQDVVSAGLERDKFVGNALVNMFGKCGSLSDAKRVFDRIAFRDVISWNALMSVYIQ-QG 233
Query: 314 HSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN 373
H KEAF+LFK M + + V +L C+++ L R+IH D VGN
Sbjct: 234 HRKEAFELFKRMDKAGLQPNSVTYLSLLPACSSLEQL---REIHQELADQGLEQDEQVGN 290
Query: 374 ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP 433
LI Y K + D+ F+ M ++V+SWT +I G +HGYG A++LY++M EG+ P
Sbjct: 291 TLITAYNKF-SLEDSVAVFERMKRRSVVSWTCMIMGMVEHGYGGRALDLYREMVVEGVRP 349
Query: 434 NDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNM 493
+ V + L AC+ EG ++ ++ ++ + VV+++ + G+ A +
Sbjct: 350 DAVALVCALDACTSVENLAEGRKIHR-LVEGTTMVTDVFVATAVVNMYGKCGKFAEAEAV 408
Query: 494 IRQMNIKPTASLWSAILGACSIYGNTS 520
+ M A+ W++++GA + +G+ +
Sbjct: 409 FQGMKTTTVAT-WNSLIGAYAQHGHAT 434
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 184/380 (48%), Gaps = 42/380 (11%)
Query: 175 LYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR-QGMKPDCF 233
+Y KCG +E+A +F I+R SWN M+G G D + LF+ M+ G++ D
Sbjct: 1 MYGKCGSVEEARAVFNSIKRSSCFSWNLMLGAYCNNGSGDQALELFKQMVDVHGIRADRV 60
Query: 234 TLGSILRAS--VGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
T + A VG +E K Q H ++ GLESS L +L+++Y + GS A +++
Sbjct: 61 TFVTAATACSLVGSLEEGK--QFHSRFVESGLESSLILDSALMNMYGRCGSAEEARKIFD 118
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
+ +++ +I+ +A+ + H EA +L+ DM LK D V +L+ C +L
Sbjct: 119 RIPVKNVVCWNVMIAAYAQ-NGHFSEALELYYDMNLKP---DRVTFLNVLHAC----TLE 170
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
GR IH D VGNAL++M+ K G ++DA R FD + ++VISW +L++ Y
Sbjct: 171 SGRLIHQDVVSAGLERDKFVGNALVNMFGKCGSLSDAKRVFDRIAFRDVISWNALMSVYI 230
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS--------HTGLTCEGWE------- 456
+ G+ EA EL+K+M G+ PN VT+LSLL ACS H L +G E
Sbjct: 231 QQGHRKEAFELFKRMDKAGLQPNSVTYLSLLPACSSLEQLREIHQELADQGLEQDEQVGN 290
Query: 457 LFTDMINKYRILPRAEHF-----------SCVVDLFARRGQLESAYNMIRQM---NIKPT 502
NK+ + F +C++ G A ++ R+M ++P
Sbjct: 291 TLITAYNKFSLEDSVAVFERMKRRSVVSWTCMIMGMVEHGYGGRALDLYREMVVEGVRPD 350
Query: 503 ASLWSAILGACSIYGNTSLG 522
A L AC+ N + G
Sbjct: 351 AVALVCALDACTSVENLAEG 370
>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 721
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 182/532 (34%), Positives = 286/532 (53%), Gaps = 9/532 (1%)
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSA 121
E N+ ++ YAK + AR+ FD +P+ + VS+ +ISGYA A+++F
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKR 130
Query: 122 MLRSGVRANQFTYSSALRACA-RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M + G + FT S + AC R+ ++ S G F V +A + Y+K G
Sbjct: 131 MRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVS---GGFDSYSSVNNAFVTYYSKGG 187
Query: 181 WIEDAWILFERI-ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
+ +A +F + E +D VSWN+MI + L++ M+ +G K D FTL S+L
Sbjct: 188 LLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVL 247
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY---QLYRSMLKT 296
A L+ Q H +IK G ++ + LID Y+K G Y ++++ +L
Sbjct: 248 NALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSP 307
Query: 297 DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI 356
D++ +ISG++ ++ S+EA F+ M DD + + C+N++S + +QI
Sbjct: 308 DLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQI 367
Query: 357 HAFAFK-YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGY 415
H A K + S +V NALI +Y KSG + DA FD M + N +S+ +I GYA+HG+
Sbjct: 368 HGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGH 427
Query: 416 GHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFS 475
G EA+ LY++M G+ PN +TF+++L AC+H G EG E F M ++I P AEH+S
Sbjct: 428 GTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYS 487
Query: 476 CVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPE 535
C++DL R G+LE A I M KP + W+A+LGAC + N +L E AA L M+P
Sbjct: 488 CMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPL 547
Query: 536 KSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKNILLL 587
+ YV+L+N+Y A W+ RK M + +RK PG S+++ KK + +
Sbjct: 548 AATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFV 599
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 313 NHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG 372
N + F F+D++LK + D L G+ +HA K + +
Sbjct: 2 NQTPWKFKTFRDLLLKSVAERD---------------LFTGKSLHALYVKSIVASSTYLS 46
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
N +++Y+K G ++ A AF + NV S+ ++ YAK H A +L+ ++
Sbjct: 47 NHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQ---- 102
Query: 433 PNDVTFLSLL 442
P+ V++ +L+
Sbjct: 103 PDTVSYNTLI 112
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 179/567 (31%), Positives = 304/567 (53%), Gaps = 41/567 (7%)
Query: 52 IHAHIITNGYESNLHLSTKVIIF---YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQ 108
IHA +I G + + +K++ F A FD + E N++ W M G+A
Sbjct: 7 IHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGHAL 66
Query: 109 NGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFV 168
+ +AL ++ M+ G+ + +T+ L++CA+ + + G+ I G + K F +++V
Sbjct: 67 SSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYV 126
Query: 169 KSALLDLYAKCG-------------------------------WIEDAWILFERIERKDV 197
++L+ +YA+ G +IE A LF+ I KDV
Sbjct: 127 HTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDV 186
Query: 198 VSWNAMIGGLAMQGFNDDSFWLFRSMMR-QGMKPDCFTLGSILRASVGGIELMKISQIHD 256
VSWNAMI G G ++ LF+ MM ++PD T+ +++ A + +H
Sbjct: 187 VSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHS 246
Query: 257 LIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSK 316
I G S+ K+ +LID+Y+K+G + +A +L+ + D+IS LI G+ N K
Sbjct: 247 WINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHM-NLYK 305
Query: 317 EAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF---AFKYQSSYDAAVGN 373
EA LF++M+ +DV + +L CA++ ++++GR IH + K + +++
Sbjct: 306 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQT 365
Query: 374 ALIDMYAKSGEIADANRAFDE-MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
+LIDMYAK G+I A + FD M ++++ +W ++I+G+A HG + A +++ +M+ G+
Sbjct: 366 SLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIE 425
Query: 433 PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYN 492
P+D+TF+ LL ACSH+G+ G +F M Y I P+ EH+ C++DL G + A
Sbjct: 426 PDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEE 485
Query: 493 MIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGA 552
MI M ++P +W ++L AC I+GN LGE A+ L +EP S +YV+LSNIY AAG
Sbjct: 486 MINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGR 545
Query: 553 WDNARKTRKLMEERSLRKN-PGYSFLQ 578
W+ K R L+ ++ ++K PG S ++
Sbjct: 546 WNEVAKIRALLNDKGMKKKVPGCSSIE 572
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/426 (30%), Positives = 213/426 (50%), Gaps = 39/426 (9%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L D T+ LL+ C K ++ IH H++ G++ ++++ T +I YA+ G + ARK
Sbjct: 86 LPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARK 145
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSA------------------------- 121
FD R+VVS+TA+I+GY GY E+A +F
Sbjct: 146 VFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEA 205
Query: 122 -------MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLD 174
M+ + VR ++ T + + ACA+ ++ GR + I F NL + +AL+D
Sbjct: 206 LELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALID 265
Query: 175 LYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFT 234
LY+K G +E A LF+ + KDV+SWN +IGG ++ LF+ M+R G P+ T
Sbjct: 266 LYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 325
Query: 235 LGSILR--ASVGGIELMKISQIH-DLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
+ SIL A +G I++ + ++ + +K + + + L SLID+YAK G I +A Q++
Sbjct: 326 MLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFD 385
Query: 292 SMLKTDIISC-TALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
S + +S A+ISGFA + AFD+F M + + DD+ +L+ C++ L
Sbjct: 386 SSMSNRSLSTWNAMISGFAM-HGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGML 444
Query: 351 NLGRQI-HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIA 408
+LGR I + Y+ + +ID+ SG +A + M + + + W SL+
Sbjct: 445 DLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLK 504
Query: 409 GYAKHG 414
HG
Sbjct: 505 ACKIHG 510
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 158/313 (50%), Gaps = 12/313 (3%)
Query: 3 IVRANFKTGQLKQAL---KFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
++ +TG K+AL K + + D ST ++++ C + +H+ I +
Sbjct: 192 MISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDH 251
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G+ SNL + +I Y+K G+V +A + FD + ++V+SW +I GY + ALL+F
Sbjct: 252 GFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLF 311
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQ---KGRFVENLFVKSALLDLY 176
MLRSG N T S L ACA + + GR I I KG ++++L+D+Y
Sbjct: 312 QEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMY 371
Query: 177 AKCGWIEDAWILFE-RIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTL 235
AKCG I+ A +F+ + + + +WNAMI G AM G + +F +F M G++PD T
Sbjct: 372 AKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITF 431
Query: 236 GSILRASVGGIELMKISQIHDLIIKLGLESSNKLT--GSLIDVYAKYGSIRSAYQLYRSM 293
+L A L I + + G E + KL G +ID+ G + A ++ +M
Sbjct: 432 VGLLSACSHSGMLDLGRNIFRSMTR-GYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTM 490
Query: 294 -LKTD-IISCTAL 304
++ D +I C+ L
Sbjct: 491 PMEPDGVIWCSLL 503
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 180/556 (32%), Positives = 299/556 (53%), Gaps = 6/556 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ +++ C + R+ H + ++ G+E +++++ I FY++ G V A F
Sbjct: 141 DHYTFPPVIRACGNLDDGRKVHCL---VLKLGFECDVYIAASFIHFYSRFGFVSLACNLF 197
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D M R++ +W AMISG+ NG AL VF M V + T SS L C ++ +
Sbjct: 198 DNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDII 257
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G +I K +LFV +AL+++YAK G + A +F +++ +D+VSWN+++
Sbjct: 258 SGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFE 317
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIK-LGLESSN 267
+ ++ M G+ PD TL S+ + + IH + +
Sbjct: 318 QNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDI 377
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
L ++ID+YAK G I SA +++ + D+IS +LI+G++++ + EA D++ M
Sbjct: 378 ALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQN-GLANEAIDVYSSMRY 436
Query: 328 KKMGIDDV-ILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ + +L + + +L G + H K +D V L+DMY K G++A
Sbjct: 437 YSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLA 496
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
DA F E+ ++ +SW ++I+ + HGYG +A++L+K+M+ EG+ P+ +TF+SLL ACS
Sbjct: 497 DALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACS 556
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
H+GL EG F M Y I P +H+ C+VDLF R G LE A+N ++ M ++P S+W
Sbjct: 557 HSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVW 616
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
A+LGAC I+ N L + +L +E E YV+LSNIY G W+ + R L +R
Sbjct: 617 GALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDR 676
Query: 567 SLRKNPGYSFLQSSKK 582
L+K PG+S ++ KK
Sbjct: 677 GLKKTPGWSSIEVDKK 692
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 153/524 (29%), Positives = 282/524 (53%), Gaps = 16/524 (3%)
Query: 49 AHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQ 108
A +HA ++ +G ++ LS K+I YA +GD+ AR FD++ ++V +W +MIS YA+
Sbjct: 59 AKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYAR 118
Query: 109 NGYDENALLVFSAMLRSG-VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLF 167
G+ A+ F+ L + ++++ +T+ +RAC L GR + + K F +++
Sbjct: 119 IGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGN---LDDGRKVHCLVLKLGFECDVY 175
Query: 168 VKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
+ ++ + Y++ G++ A LF+ + +D+ +WNAMI G + G ++ +F M +
Sbjct: 176 IAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKS 235
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
+ D T+ S+L V +++ IH IKLGLE + +LI++YAK+G +RSA
Sbjct: 236 VSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAE 295
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
++ M DI+S +L++ F ++ A ++ M + D + L + ++ A +
Sbjct: 296 TIFNQMKVRDIVSWNSLLAAFEQNKK-PVIALGVYNKMHSIGVVPDLLTLVSLASVAAEL 354
Query: 348 ASLNLGRQIHAFAFKY-QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
+ R IH F + +D A+GNA+IDMYAK G I A + F+ + K+VISW SL
Sbjct: 355 GNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSL 414
Query: 407 IAGYAKHGYGHEAIELYKKMK-HEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
I GY+++G +EAI++Y M+ + G VPN T++S+L A S G +G + +I +
Sbjct: 415 ITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNF 474
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
+C+VD++ + G+L A ++ ++ + + S W+AI+ ++G G A
Sbjct: 475 LYFDIFVS-TCLVDMYGKCGKLADALSLFYEVPHQSSVS-WNAIISCHGLHG---YGLKA 529
Query: 526 ARNLFDMEPE----KSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
+ +M+ E + +V L + + +G D + +LM+E
Sbjct: 530 VKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQE 573
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 195/405 (48%), Gaps = 13/405 (3%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D T SLL C+ LIH + I G E +L + +I YAK G++ SA
Sbjct: 238 MDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETI 297
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F++M R++VSW ++++ + QN AL V++ M GV + T S A +
Sbjct: 298 FNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNF 357
Query: 148 QGGRMIQGSI-QKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
R I G + ++ F+ ++ + +A++D+YAK G+I+ A +FE + KDV+SWN++I G
Sbjct: 358 LSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITG 417
Query: 207 LAMQGFNDDSFWLFRSM-MRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
+ G +++ ++ SM G P+ T SIL A L + + H +IK L
Sbjct: 418 YSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYF 477
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
++ L+D+Y K G + A L+ + +S A+IS + +A LFK+M
Sbjct: 478 DIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGL-HGYGLKAVKLFKEM 536
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGR---QIHAFAFKYQSSYDAAVGNALIDMYAKS 382
+ + D + +L+ C++ ++ G+ Q+ + + S ++D++ ++
Sbjct: 537 QSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHY--GCMVDLFGRA 594
Query: 383 GEIADANRAFDEMGDKNVIS-WTSLIAGYAKHGYGHEAIELYKKM 426
G + A M + +S W +L+ HE +EL + +
Sbjct: 595 GHLEKAFNFVKNMPVRPDVSVWGALLGACRI----HENVELVRTV 635
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 24/198 (12%)
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
++L +Q+HA + + LI+ YA G+I A FD++ K+V +W S+I+
Sbjct: 56 VHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISA 115
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPND-VTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
YA+ G+ H A++ + + + +D TF ++ AC + D K L
Sbjct: 116 YARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGN-----------LDDGRKVHCL 164
Query: 469 PRAEHFSC-------VVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSL 521
F C + ++R G + A N+ M I+ + W+A++ Y N +
Sbjct: 165 VLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGT-WNAMISG--FYLNGKV 221
Query: 522 GELAARNLFDMEPEKSVN 539
E A +FD KSV+
Sbjct: 222 AE--ALEVFDEMRFKSVS 237
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 184/586 (31%), Positives = 297/586 (50%), Gaps = 69/586 (11%)
Query: 64 NLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML 123
N+ ++ +AK G + AR F MPER+ VSWT M+ G + G A+ M
Sbjct: 97 NVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMT 156
Query: 124 RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIE 183
G QFT ++ L +CA + GR + + K + V +++L++Y KCG E
Sbjct: 157 ADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSE 216
Query: 184 DAWILFERIERKDV-------------------------------VSWNAMIGGLAMQGF 212
A +FER+ + V VSWNAMI G G
Sbjct: 217 TATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGL 276
Query: 213 NDDSFWLFRSMMRQG-MKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGLESSNKL 269
+ + LF M+ + M PD FT+ S+L A ++G + + K Q+H I++ + ++++
Sbjct: 277 DAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGK--QVHAYILRTEMAYNSQV 334
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTD--IISCTALISGFAR----------------- 310
T +LI YAK GS+ +A ++ ++TD +IS TAL+ G+ +
Sbjct: 335 TNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNR 394
Query: 311 -------------DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
+ + EA DLF+ MI + L +L++CA++A L+ G+QIH
Sbjct: 395 DVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIH 454
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHGYG 416
A + ++V NA+I MYA+SG A R FD++ K I+WTS+I A+HG G
Sbjct: 455 CRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQG 514
Query: 417 HEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSC 476
EA+ L+++M G+ P+ +T++ +L ACSH G EG + + N+++I P H++C
Sbjct: 515 EEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYAC 574
Query: 477 VVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEK 536
+VDL AR G A IR+M ++P A W ++L AC ++ N L ELAA L ++P
Sbjct: 575 MVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNN 634
Query: 537 SVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
S Y ++N+Y+A G W +A + K +E+++RK G+S+ K
Sbjct: 635 SGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSK 680
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 225/477 (47%), Gaps = 75/477 (15%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ G+ +A+K L P+ T ++L C +A +H+ ++ G S +
Sbjct: 141 RAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVP 200
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNV------------------------------ 96
++ V+ Y K GD +A F+RMP R+V
Sbjct: 201 VANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRS 260
Query: 97 -VSWTAMISGYAQNGYDENALLVFSAML-RSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
VSW AMI+GY QNG D AL +FS ML S + ++FT +S L ACA + ++ G+ +
Sbjct: 261 IVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVH 320
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER----------------------- 191
I + N V +AL+ YAK G +E+A + ++
Sbjct: 321 AYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGD 380
Query: 192 ----------IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR- 240
+ +DVV+W AMI G G ND++ LFRSM+ G +P+ +TL ++L
Sbjct: 381 MESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSV 440
Query: 241 -ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML-KTDI 298
AS+ ++ K QIH I+ LE S+ ++ ++I +YA+ GS A +++ + + +
Sbjct: 441 CASLACLDYGK--QIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKET 498
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH- 357
I+ T++I A+ +EA LF++M+ + D + +L+ C++ +N G++ +
Sbjct: 499 ITWTSMIVALAQ-HGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYD 557
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKH 413
++Q + + + ++D+ A++G ++A M + + I+W SL++ H
Sbjct: 558 QIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVH 614
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 108/239 (45%), Gaps = 49/239 (20%)
Query: 340 MLNICANVASLNLGRQIHAFAFK----------------YQSSYDAAVG----------- 372
+L +C A+ GR IHA A K Y + A G
Sbjct: 32 LLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEI 91
Query: 373 ----------NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIEL 422
N+L+ M+AKSG +ADA F EM +++ +SWT ++ G + G EAI+
Sbjct: 92 PLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKT 151
Query: 423 YKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWEL--FTDMINKYRILPRAEHFSCVVDL 480
M +G P T ++L +C+ T G ++ F + +P A + V+++
Sbjct: 152 LLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVA---NSVLNM 208
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGEL-AARNLFDMEPEKSV 538
+ + G E+A + +M ++ +S W+A++ NT LG + A +LF+ P++S+
Sbjct: 209 YGKCGDSETATTVFERMPVRSVSS-WNAMVSL-----NTHLGRMDLAESLFESMPDRSI 261
>gi|413923618|gb|AFW63550.1| hypothetical protein ZEAMMB73_399779 [Zea mays]
Length = 1118
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 171/552 (30%), Positives = 303/552 (54%), Gaps = 3/552 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYES-NLHLSTKVIIFYAKVGDVLSARKA 87
D T LL+ C + +HA + + S + ++T ++ Y++ GD+ A A
Sbjct: 565 DGFTLSLLLRACTALPSLTHGRAVHAAAVRSCTASEDAFVATAIVQMYSRCGDMAGAINA 624
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSA-MLRSGVRANQFTYSSALRACARMRW 146
+ + + ++V T++++GY QNG E AL F+ ++ GV T S + A A++
Sbjct: 625 YGMLEKPDIVLRTSVVTGYEQNGMAEEALEFFARNVVGQGVLVTPVTLVSVMSAAAQLGH 684
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
++ G+ + + +L + +A+L Y K G ++ + LFE + +DV++W+ MI G
Sbjct: 685 VRKGQACHAYVVRNSLSYDLALVNAVLGFYVKIGDLQASMRLFEGMTDRDVITWSCMIKG 744
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
G F ++R M++ ++P+ TL S+L+A ++ + ++H + + +G E
Sbjct: 745 YVQHGDAHTGFRMYREMVKARVQPNSVTLVSVLQACALVVDAEEGKRLHRVAVSIGCELE 804
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ +L+D+Y K A +L+ M K D+++ A+I G +++ E+ FK M+
Sbjct: 805 LGVATALVDMYMKCSCHEEAMRLFHRMPKKDVVAWAAVIGGLTQNEL-PGESLHSFKCML 863
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
L D V + +L C+ L +H + + + +A V AL+D+Y+K G++
Sbjct: 864 LNDHVPDAVTMVKVLAACSEFGGNRLAICLHGYLVRNGFNNNAFVAAALLDLYSKCGDLD 923
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A R F+ +K+++ W S+IAGY HG G EA+ LY++M + PN+VTFLS+L ACS
Sbjct: 924 SAVRVFEGTTEKDIVVWGSMIAGYGAHGLGQEAVALYQRMIASSIQPNNVTFLSVLSACS 983
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
H+GL EG ++F M + ++P AEH S +VDL R G+L+ A +IR M+ + A W
Sbjct: 984 HSGLVQEGIQIFDSMTQVFGVVPNAEHQSAMVDLLGRAGELQEAIRVIRDMDGRAVAHTW 1043
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
A+L AC + NT + E+AA+NL ++P+ Y +L+N+Y W+N + TR +++ R
Sbjct: 1044 CALLAACRKHNNTKMSEVAAKNLLKLDPDHVGYYNLLTNLYAFDEKWENVKDTRDMVKGR 1103
Query: 567 SLRKNPGYSFLQ 578
LRK GYS ++
Sbjct: 1104 DLRKVAGYSSVE 1115
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 119/424 (28%), Positives = 221/424 (52%), Gaps = 20/424 (4%)
Query: 2 NIVRANFKTGQLKQALKF---SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIIT 58
++V + G ++AL+F ++ L+ P T +S++ R+ HA+++
Sbjct: 638 SVVTGYEQNGMAEEALEFFARNVVGQGVLVTPVTLVSVMSAAAQLGHVRKGQACHAYVVR 697
Query: 59 NGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLV 118
N +L L V+ FY K+GD+ ++ + F+ M +R+V++W+ MI GY Q+G +
Sbjct: 698 NSLSYDLALVNAVLGFYVKIGDLQASMRLFEGMTDRDVITWSCMIKGYVQHGDAHTGFRM 757
Query: 119 FSAMLRSGVRANQFTYSSALRACAR-MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYA 177
+ M+++ V+ N T S L+ACA + +G R+ + ++ G +E L V +AL+D+Y
Sbjct: 758 YREMVKARVQPNSVTLVSVLQACALVVDAEEGKRLHRVAVSIGCELE-LGVATALVDMYM 816
Query: 178 KCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGS 237
KC E+A LF R+ +KDVV+W A+IGGL +S F+ M+ PD T+
Sbjct: 817 KCSCHEEAMRLFHRMPKKDVVAWAAVIGGLTQNELPGESLHSFKCMLLNDHVPDAVTMVK 876
Query: 238 ILRA--SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLK 295
+L A GG L +H +++ G ++ + +L+D+Y+K G + SA +++ +
Sbjct: 877 VLAACSEFGGNRLAIC--LHGYLVRNGFNNNAFVAAALLDLYSKCGDLDSAVRVFEGTTE 934
Query: 296 TDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQ 355
DI+ ++I+G+ +EA L++ MI + ++V +L+ C++ + G Q
Sbjct: 935 KDIVVWGSMIAGYG-AHGLGQEAVALYQRMIASSIQPNNVTFLSVLSACSHSGLVQEGIQ 993
Query: 356 IHAFAFKYQSSYDAAVGN-----ALIDMYAKSGEIADANRAFDEMGDKNVI-SWTSLIAG 409
I F + V N A++D+ ++GE+ +A R +M + V +W +L+A
Sbjct: 994 I----FDSMTQVFGVVPNAEHQSAMVDLLGRAGELQEAIRVIRDMDGRAVAHTWCALLAA 1049
Query: 410 YAKH 413
KH
Sbjct: 1050 CRKH 1053
>gi|255542116|ref|XP_002512122.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549302|gb|EEF50791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 800
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 193/583 (33%), Positives = 304/583 (52%), Gaps = 5/583 (0%)
Query: 2 NIVRANFKTGQLKQALKFS--LSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
+I+ G+ + L+ L D LD T +S+ C + R A +H II
Sbjct: 170 SIISCYVDNGESSEGLEMFRLLVSQDVELDSVTMLSIAGACGELGFLRLAKSVHGCIIRQ 229
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
E+ L+ +++ Y++ D SA + F M R++ SWTAMIS Y ++ + + AL VF
Sbjct: 230 RIETRGPLNDALVLMYSRCDDFSSAERIFSNMFNRSIASWTAMISCYNRSRWFKQALQVF 289
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
ML V N T + L +CA L+ G+ + K +++ + AL++ YA+
Sbjct: 290 VEMLEFKVAPNAVTIMAVLSSCAGFNLLREGKSVHCYAVKHIDLDDDSLGPALIEYYAQF 349
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G + + I +++++SWN +I A QG ++ +F M RQG PD F+L S +
Sbjct: 350 GKLSYCEKVLHTIGKRNIISWNMLISVYASQGLFKEALGIFVQMQRQGQIPDSFSLSSSI 409
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
A L QIH IK + + SLID+Y+K G + AY ++ + ++
Sbjct: 410 SACANVGLLWLGHQIHGYAIKRHI-LDEFVQNSLIDMYSKCGHVDLAYLIFDRIQSKSVV 468
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
+ ++I GF++ N S EA LF M L + +++V + C+++ L G+ +H
Sbjct: 469 AWNSMICGFSQIGN-SLEAIRLFDQMYLNCLDMNEVTFLTAIQACSHMGHLEKGKWLHHK 527
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
Y D + ALIDMYAK G++ A+R FD M +++V+SW+++I G HG A
Sbjct: 528 LIAYGVKKDLFIDTALIDMYAKCGDLRIAHRVFDSMSERSVVSWSAMIGGCGMHGDIDAA 587
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD 479
I L+ +M M PND+TF+++L ACSH+G EG F M N + + P EHF+C+VD
Sbjct: 588 ISLFAEMIQREMKPNDITFMNILSACSHSGYVEEGKFYFNSMKN-FEVEPNLEHFACMVD 646
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVN 539
L +R G L+ AY +I M AS+W A+L C I+ + R+L DM + +
Sbjct: 647 LLSRAGDLDEAYRIINSMPFPAEASIWGALLNGCRIHQRMDMIRNIERDLLDMRTDDTGY 706
Query: 540 YVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
Y +LSNIY G WD +RK R M+ L+K PGYS ++ KK
Sbjct: 707 YTLLSNIYAEEGNWDVSRKVRSAMKGIGLKKVPGYSTIELDKK 749
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 146/501 (29%), Positives = 251/501 (50%), Gaps = 10/501 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H II G + + + T ++ Y +G + +A+K FD M R++VSW+++IS Y NG
Sbjct: 121 VHGRIIKYGLDVDHVVETSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGE 180
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
L +F ++ V + T S AC + +L+ + + G I + R + A
Sbjct: 181 SSEGLEMFRLLVSQDVELDSVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLNDA 240
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+ +Y++C A +F + + + SW AMI + + +F M+ + P+
Sbjct: 241 LVLMYSRCDDFSSAERIFSNMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPN 300
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
T+ ++L + G L + +H +K + L +LI+ YA++G + ++
Sbjct: 301 AVTIMAVLSSCAGFNLLREGKSVHCYAVKHIDLDDDSLGPALIEYYAQFGKLSYCEKVLH 360
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
++ K +IIS LIS +A KEA +F M + D L ++ CANV L
Sbjct: 361 TIGKRNIISWNMLISVYA-SQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLW 419
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
LG QIH +A K + D V N+LIDMY+K G + A FD + K+V++W S+I G++
Sbjct: 420 LGHQIHGYAIK-RHILDEFVQNSLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMICGFS 478
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
+ G EAI L+ +M + N+VTFL+ + ACSH G +G L +I Y +
Sbjct: 479 QIGNSLEAIRLFDQMYLNCLDMNEVTFLTAIQACSHMGHLEKGKWLHHKLI-AYGVKKDL 537
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
+ ++D++A+ G L A+ + M+ + S WSA++G C ++G+ AA +LF
Sbjct: 538 FIDTALIDMYAKCGDLRIAHRVFDSMSERSVVS-WSAMIGGCGMHGDID----AAISLFA 592
Query: 532 --MEPEKSVNYVVLSNIYTAA 550
++ E N + NI +A
Sbjct: 593 EMIQREMKPNDITFMNILSAC 613
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/502 (26%), Positives = 266/502 (52%), Gaps = 13/502 (2%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
+ YM L + C + R L+H+H++ G + STK+I Y+++G + S++ F+
Sbjct: 2 TLYMPLFRSC---TSLRPLTLLHSHLLVTGLHHDPQASTKLIESYSQIGCLQSSKLVFET 58
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+ W +I + + + A+ +++ M+ + + F +SS LRACA L G
Sbjct: 59 FQNPDSFMWAVLIKCHVWSNFCGEAISLYNKMIYKQIPISDFIFSSVLRACAGFGNLDVG 118
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ G I K + V+++LL +Y G + +A +F+ + +D+VSW+++I
Sbjct: 119 EEVHGRIIKYGLDVDHVVETSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDN 178
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKL 269
G + + +FR ++ Q ++ D T+ SI A G + +++++ +H II+ +E+ L
Sbjct: 179 GESSEGLEMFRLLVSQDVELDSVTMLSIAGA-CGELGFLRLAKSVHGCIIRQRIETRGPL 237
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+L+ +Y++ SA +++ +M I S TA+IS + R K+A +F +M+ K
Sbjct: 238 NDALVLMYSRCDDFSSAERIFSNMFNRSIASWTAMISCYNR-SRWFKQALQVFVEMLEFK 296
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ + V + +L+ CA L G+ +H +A K+ D ++G ALI+ YA+ G+++
Sbjct: 297 VAPNAVTIMAVLSSCAGFNLLREGKSVHCYAVKHIDLDDDSLGPALIEYYAQFGKLSYCE 356
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
+ +G +N+ISW LI+ YA G EA+ ++ +M+ +G +P+ + S + AC++ G
Sbjct: 357 KVLHTIGKRNIISWNMLISVYASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVG 416
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
L G ++ I ++ IL S ++D++++ G ++ AY + ++ K + W+++
Sbjct: 417 LLWLGHQIHGYAIKRH-ILDEFVQNS-LIDMYSKCGHVDLAYLIFDRIQSKSVVA-WNSM 473
Query: 510 LGACSIYGNTSLGELAARNLFD 531
+ S GN+ L A LFD
Sbjct: 474 ICGFSQIGNS----LEAIRLFD 491
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 7/208 (3%)
Query: 344 CANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISW 403
C ++ L L +H+ +D LI+ Y++ G + + F+ + + W
Sbjct: 11 CTSLRPLTL---LHSHLLVTGLHHDPQASTKLIESYSQIGCLQSSKLVFETFQNPDSFMW 67
Query: 404 TSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMIN 463
LI + + EAI LY KM ++ + +D F S+L AC+ G G E+ +I
Sbjct: 68 AVLIKCHVWSNFCGEAISLYNKMIYKQIPISDFIFSSVLRACAGFGNLDVGEEVHGRII- 126
Query: 464 KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGE 523
KY + + ++ ++ G L +A + M + S WS+I+ G +S G
Sbjct: 127 KYGLDVDHVVETSLLGMYGDLGCLSNAKKVFDNMTTRDLVS-WSSIISCYVDNGESSEGL 185
Query: 524 LAARNLFDMEPEKSVNYVVLSNIYTAAG 551
R L + E ++ V + +I A G
Sbjct: 186 EMFRLLVSQDVE--LDSVTMLSIAGACG 211
>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
Length = 941
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 185/556 (33%), Positives = 311/556 (55%), Gaps = 9/556 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
TYMS+++ C + A ++ +I A I+ + + S+ L+T +I Y + G + A+ + M
Sbjct: 262 TYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHM 321
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
+R+VV+W AM++ AQNG + A+ + M G AN+ TY S L ACA + L GR
Sbjct: 322 YQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGR 381
Query: 152 MIQGSIQK-GRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
I + G + V ++++ +Y KCG E A +FE + RKD VSWNA+I
Sbjct: 382 EIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGN 441
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLGLESSNKL 269
D+ LF M +G++ + FTL S+L A GG+E +K++ QIH G ++
Sbjct: 442 SKFQDALELFHGMELEGLRSNEFTLLSLLEA-CGGLEDLKLARQIHARAAAGGFGGNSTA 500
Query: 270 TG-SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD-DNHSKEAFDLFKDMIL 327
G S++++YA+ GS+ A + + S+ + +++ + +++ +A+ D + AF F++M
Sbjct: 501 VGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEA 560
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIH--AFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ + +V L+ CA +A+L GR +H A A + + +GN +I+MY K G
Sbjct: 561 EGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVET-SLVLGNTIINMYGKCGSP 619
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
+DA FD+M +K +ISW SLI YA +G+ EA+ ++M +G P+ T +S+L+
Sbjct: 620 SDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGL 679
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
SH GL G E F I + + P + C+VDL AR+G L++A +I ++
Sbjct: 680 SHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTI 739
Query: 506 -WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
W +L AC YG+ G A +F++EP+ S ++VVL+N+Y + G W +A + RK+ME
Sbjct: 740 AWMTLLAACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLYASVGRWSDASRIRKMME 799
Query: 565 ERSLRKNPGYSFLQSS 580
S++K PG S+++ S
Sbjct: 800 RMSVKKEPGCSWIELS 815
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 134/419 (31%), Positives = 226/419 (53%), Gaps = 5/419 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+++++ C + IH II G E + L ++ Y G + F RM
Sbjct: 161 TFVTIVDVCAKLRLLDLGRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRM 220
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
+ +V+ WT MI+G +QNG E LLVF M GV+AN+ TY S + C + ++ G
Sbjct: 221 GQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGE 280
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
MI I + F + + ++L+ LY +CG ++ A L E + ++DVV+WNAM+ A G
Sbjct: 281 MIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNG 340
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
N ++ L R M +G + T S+L A L + +IH ++ GL G
Sbjct: 341 DNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVG 400
Query: 272 -SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
S+I +Y K G +A ++ +M + D +S A+I+ + ++ ++A +LF M L+ +
Sbjct: 401 NSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINA-SVGNSKFQDALELFHGMELEGL 459
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDA-AVGNALIDMYAKSGEIADAN 389
++ L +L C + L L RQIHA A ++ AVGN++++MYA+ G + DA
Sbjct: 460 RSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAK 519
Query: 390 RAFDEMGDKNVISWTSLIAGYA--KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
+AFD + +K +++W+ ++A YA K G G A + +++M+ EG+ P +VTF+S L AC+
Sbjct: 520 KAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACA 578
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 148/507 (29%), Positives = 242/507 (47%), Gaps = 5/507 (0%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ G ++AL+ + T D ++ L C IH+ ++ +G SN+
Sbjct: 35 QNGHYREALELFTRMQWEGTRPDKVVFVIALDACAASGELDHGRQIHSSVVGSGLTSNII 94
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+S ++ Y K DV A K FD M R+VVSWTAM++ YAQNG AL S M G
Sbjct: 95 ISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEG 154
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
V+ NQ T+ + + CA++R L GR I I + + +AL+ +Y CG +D
Sbjct: 155 VKPNQVTFVTIVDVCAKLRLLDLGRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMK 214
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+F R+ + V+ W MI G + G ++ +FR M +G+K + T S++
Sbjct: 215 SVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLD 274
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
+ + I I++ SS L SLI +Y + G + A L M + D+++ A+++
Sbjct: 275 AVKEGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVT 334
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ-S 365
A++ ++ EA L + M ++ G + V +L CAN+ +L+ GR+IHA
Sbjct: 335 ACAQNGDN-WEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLL 393
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKK 425
+ AVGN++I MY K G+ A F+ M K+ +SW ++I + +A+EL+
Sbjct: 394 QREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHG 453
Query: 426 MKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRG 485
M+ EG+ N+ T LSLL AC ++ + VV+++AR G
Sbjct: 454 MELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCG 513
Query: 486 QLESAYNMIRQMNIKPTASLWSAILGA 512
L A + K + WS IL A
Sbjct: 514 SLLDAKKAFDSLEEKGLVA-WSIILAA 539
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 245/493 (49%), Gaps = 12/493 (2%)
Query: 74 FYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFT 133
Y K V A FD + +NV SWT M++ Y+QNG+ AL +F+ M G R ++
Sbjct: 1 MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60
Query: 134 YSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE 193
+ AL ACA L GR I S+ N+ + ++L+++Y KC + A +F+ +
Sbjct: 61 FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120
Query: 194 RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS- 252
+DVVSW AM+ A G + M +G+KP+ T +I+ + L+ +
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDV-CAKLRLLDLGR 179
Query: 253 QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDD 312
+IH II GLE L +L+ +Y GS ++ M ++ ++ T +I+G +++
Sbjct: 180 KIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNG 239
Query: 313 NHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG 372
+ +E +F+ M L+ + ++V M+ +C N+ ++ G I A + +
Sbjct: 240 QY-EEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLA 298
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
+LI +Y + G + A + M ++V++W +++ A++G EAI L ++M EG
Sbjct: 299 TSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFG 358
Query: 433 PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYN 492
N VT+LS+L AC++ +G E+ ++ + + V+ ++ + GQ E+A +
Sbjct: 359 ANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMS 418
Query: 493 MIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF---DMEPEKSVNYVVLSNIYTA 549
+ M K S W+A++ A GN+ + A LF ++E +S + +LS + A
Sbjct: 419 VFEAMPRKDDVS-WNAVINAS--VGNSKFQD--ALELFHGMELEGLRSNEFTLLS-LLEA 472
Query: 550 AGAWDNARKTRKL 562
G ++ + R++
Sbjct: 473 CGGLEDLKLARQI 485
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 183/576 (31%), Positives = 293/576 (50%), Gaps = 69/576 (11%)
Query: 74 FYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFT 133
+AK G + AR F MPER+ VSWT M+ G + G A+ M G QFT
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 134 YSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE 193
++ L +CA + GR + + K + V +++L++Y KCG E A +FER+
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120
Query: 194 RKDV-------------------------------VSWNAMIGGLAMQGFNDDSFWLFRS 222
+ V VSWNAMI G G + + LF
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180
Query: 223 MMRQG-MKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAK 279
M+ + M PD FT+ S+L A ++G + + K Q+H I++ + ++++T +LI YAK
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGK--QVHAYILRTEMAYNSQVTNALISTYAK 238
Query: 280 YGSIRSAYQLYRSMLKTD--IISCTALISGFAR--------------------------- 310
GS+ +A ++ ++TD +IS TAL+ G+ +
Sbjct: 239 SGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIV 298
Query: 311 ---DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSY 367
+ + EA DLF+ MI + L +L++CA++A L+ G+QIH A +
Sbjct: 299 GYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQ 358
Query: 368 DAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
++V NA+I MYA+SG A R FD++ K I+WTS+I A+HG G EA+ L+++M
Sbjct: 359 SSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEM 418
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
G+ P+ +T++ +L ACSH G EG + + N+++I P H++C+VDL AR G
Sbjct: 419 LRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGL 478
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
A IR+M ++P A W ++L AC ++ N L ELAA L ++P S Y ++N+
Sbjct: 479 FSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANV 538
Query: 547 YTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
Y+A G W +A + K +E+++RK G+S+ K
Sbjct: 539 YSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSK 574
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 225/477 (47%), Gaps = 75/477 (15%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ G+ +A+K L P+ T ++L C +A +H+ ++ G S +
Sbjct: 35 RAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVP 94
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNV------------------------------ 96
++ V+ Y K GD +A F+RMP R+V
Sbjct: 95 VANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRS 154
Query: 97 -VSWTAMISGYAQNGYDENALLVFSAML-RSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
VSW AMI+GY QNG D AL +FS ML S + ++FT +S L ACA + ++ G+ +
Sbjct: 155 IVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVH 214
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER----------------------- 191
I + N V +AL+ YAK G +E+A + ++
Sbjct: 215 AYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGD 274
Query: 192 ----------IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR- 240
+ +DVV+W AMI G G ND++ LFRSM+ G +P+ +TL ++L
Sbjct: 275 MESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSV 334
Query: 241 -ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML-KTDI 298
AS+ ++ K QIH I+ LE S+ ++ ++I +YA+ GS A +++ + + +
Sbjct: 335 CASLACLDYGK--QIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKET 392
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH- 357
I+ T++I A+ +EA LF++M+ + D + +L+ C++ +N G++ +
Sbjct: 393 ITWTSMIVALAQ-HGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYD 451
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKH 413
++Q + + + ++D+ A++G ++A M + + I+W SL++ H
Sbjct: 452 QIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVH 508
>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Vitis vinifera]
Length = 773
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 174/547 (31%), Positives = 303/547 (55%), Gaps = 2/547 (0%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
+LQ C + + IH +I G++ ++ + T +I Y++ GD+ +A K + + ++
Sbjct: 185 ILQACDSLENLVRGEQIHGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKD 244
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG 155
V MIS Y + G E A+ VF +L SG+ N +T+++ + AC ++ R++ G
Sbjct: 245 VRCLNFMISEYGKAGCGEKAIGVFLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHG 304
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD 215
K + + V +A++ +Y K G +E+A F + +++VSW A++ G G
Sbjct: 305 MCIKCGCGDEISVGNAIVSVYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKK 364
Query: 216 SFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLID 275
+ F ++ G+ D ++L L QIH ++KLG + +LID
Sbjct: 365 ALEGFSQILELGVGFDSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALID 424
Query: 276 VYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDV 335
+YAK +RSA ++ S+L +I+S A++SG+ D ++A LF + L + D V
Sbjct: 425 LYAKCRKLRSARLVFHSLLDKNIVSFNAILSGYIGAD--EEDAMALFSQLRLADIKPDSV 482
Query: 336 ILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEM 395
+L++ A+ A L G+ +HA+ K + +VGNA+I MYAK G I DA + F M
Sbjct: 483 TFARLLSLSADQACLVKGKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSM 542
Query: 396 GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGW 455
+ ISW ++I+ YA HG G +A+ L+++MK E VP+++T LS+L ACS++GL EG+
Sbjct: 543 NYLDSISWNAVISAYALHGQGRKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEGF 602
Query: 456 ELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSI 515
LF DM +KY I P EHF+C+VDL R G L A + I + + LW ++ C +
Sbjct: 603 CLFNDMESKYGIKPEIEHFACMVDLLGRAGYLSEAMSFINRSPFSGSPLLWRTLVHVCKL 662
Query: 516 YGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYS 575
+G+ + G++A+++L D+ PE++ +Y+++SN+Y G + A + R +M + + K G S
Sbjct: 663 HGDLNFGQIASKHLLDLAPEEAGSYILVSNLYAGGGMLNEAARVRTVMNDLKVSKEAGSS 722
Query: 576 FLQSSKK 582
+++ K
Sbjct: 723 WIEIDNK 729
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 132/482 (27%), Positives = 242/482 (50%), Gaps = 4/482 (0%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
LLQ I IHA + GY+++ ++ Y K + A+ FD M RN
Sbjct: 84 LLQISIGSGDLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRN 143
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG 155
++WT +I G+ Q E+ + M G N+ T S L+AC + L G I G
Sbjct: 144 TITWTTLIKGHLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHG 203
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD 215
+ K F E++FV ++L+ +Y++CG + A ++ + KDV N MI G +
Sbjct: 204 FVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEK 263
Query: 216 SFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLID 275
+ +F ++ G++P+ +T +++ A G I++ + +H + IK G + +++
Sbjct: 264 AIGVFLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVS 323
Query: 276 VYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDV 335
VY K+G + A + + M + +++S TAL+SG+ ++ N K+A + F ++ +G D
Sbjct: 324 VYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGN-GKKALEGFSQILELGVGFDSC 382
Query: 336 ILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEM 395
+L+ C+ +L LG QIH F K +D +VG ALID+YAK ++ A F +
Sbjct: 383 CFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSL 442
Query: 396 GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGW 455
DKN++S+ ++++GY +A+ L+ +++ + P+ VTF LL + +G
Sbjct: 443 LDKNIVSFNAILSGYIGADE-EDAMALFSQLRLADIKPDSVTFARLLSLSADQACLVKGK 501
Query: 456 ELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSI 515
L +I K + V+ ++A+ G + A + MN + S W+A++ A ++
Sbjct: 502 CLHAYII-KTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMNYLDSIS-WNAVISAYAL 559
Query: 516 YG 517
+G
Sbjct: 560 HG 561
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 201/386 (52%), Gaps = 11/386 (2%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFC---IDKKAERQAHLIHAHIITNGYES 63
K G ++A+ L + L+P+ T+ +++ C ID + R ++H I G
Sbjct: 257 KAGCGEKAIGVFLHLLGSGLEPNDYTFTNVISACNGDIDVEVLR---VLHGMCIKCGCGD 313
Query: 64 NLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML 123
+ + ++ Y K G + A K+F M ERN+VSWTA++SGY +NG + AL FS +L
Sbjct: 314 EISVGNAIVSVYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQIL 373
Query: 124 RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIE 183
GV + +++ L C+ + L G I G + K +V ++ V +AL+DLYAKC +
Sbjct: 374 ELGVGFDSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLR 433
Query: 184 DAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV 243
A ++F + K++VS+NA++ G + +D+ LF + +KPD T +L S
Sbjct: 434 SARLVFHSLLDKNIVSFNAILSGY-IGADEEDAMALFSQLRLADIKPDSVTFARLLSLSA 492
Query: 244 GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTA 303
L+K +H IIK G E++ + ++I +YAK GSI A QL+ SM D IS A
Sbjct: 493 DQACLVKGKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMNYLDSISWNA 552
Query: 304 LISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI-HAFAFK 362
+IS +A ++A LF++M ++ D++ + +L C+ L G + + K
Sbjct: 553 VISAYAL-HGQGRKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEGFCLFNDMESK 611
Query: 363 YQSSYDAAVGNALIDMYAKSGEIADA 388
Y + ++D+ ++G +++A
Sbjct: 612 YGIKPEIEHFACMVDLLGRAGYLSEA 637
>gi|413917687|gb|AFW57619.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 611
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 179/518 (34%), Positives = 284/518 (54%), Gaps = 11/518 (2%)
Query: 71 VIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA- 129
++ Y + G A + FD M R+ VSW +++S A +AL + ML + A
Sbjct: 63 LVAMYGRCGCRGDAVRVFDEMALRDSVSWNSLLSASASA---TDALALLRRMLSAAPGAA 119
Query: 130 --NQFTYSSALRACARMRWLQGG---RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIED 184
+ T ++ L ACAR G + G + V +AL+ Y +C
Sbjct: 120 ACDHATLTTVLSACARAGGGTGSASLPAVHGLAASCGLDAEVSVGNALITAYFECSSPGS 179
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG 244
A +F+ + ++V++W AM+ G+A +S LFR MR+ + + + S L A G
Sbjct: 180 AERVFDGMADRNVITWTAMVSGMARAERYSESLSLFR-QMRRAVDANRASYSSSLLACAG 238
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
+ QIH L +K GLE+ + L+D+Y+K G + A +++RS D +S T +
Sbjct: 239 SRAAREGQQIHGLAVKAGLETDLHVESELMDMYSKCGLMEDALRVFRSGQDPDEVSLTVI 298
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
++GFA++ +EAF LF +M+ K + +D ++ +L A LG+QIHA A K
Sbjct: 299 LAGFAQN-GLEEEAFRLFAEMVGKGIRVDANMVSAVLGAFGASAPFALGKQIHALAIKRC 357
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
+ V N LI+MY+K GE+ ++ R FD KN ++W S+IA YA+HG+G E L++
Sbjct: 358 FGGNTYVCNGLINMYSKCGELQESIRVFDGTPSKNTVTWNSIIAAYARHGHGWEVFGLFE 417
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
M+ +G+ P DVTFLSLL CSH G +G E+ M +KY I P+ EH++CVVD+ R
Sbjct: 418 SMEADGVKPTDVTFLSLLHGCSHVGSPRKGLEILDSMPSKYGIHPKVEHYACVVDMLGRA 477
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLS 544
QL+ A I K +A LW +++GACS + N+ +GE AA L ++P+ + YV+LS
Sbjct: 478 SQLDDAKAFIEDGPFKDSALLWQSLMGACSFHKNSGVGECAAEKLLLLDPDCTAAYVLLS 537
Query: 545 NIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
N+Y++ G WD+ + K M R LRK+ G S+++ K+
Sbjct: 538 NVYSSEGRWDDRARIMKRMRARGLRKDTGKSWIELEKE 575
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 190/376 (50%), Gaps = 9/376 (2%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H + G ++ + + +I Y + SA + FD M +RNV++WTAM+SG A+
Sbjct: 148 VHGLAASCGLDAEVSVGNALITAYFECSSPGSAERVFDGMADRNVITWTAMVSGMARAER 207
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+L +F M R+ V AN+ +YSS+L ACA R + G+ I G K +L V+S
Sbjct: 208 YSESLSLFRQMRRA-VDANRASYSSSLLACAGSRAAREGQQIHGLAVKAGLETDLHVESE 266
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+D+Y+KCG +EDA +F + D VS ++ G A G +++F LF M+ +G++ D
Sbjct: 267 LMDMYSKCGLMEDALRVFRSGQDPDEVSLTVILAGFAQNGLEEEAFRLFAEMVGKGIRVD 326
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
+ ++L A QIH L IK + + LI++Y+K G ++ + +++
Sbjct: 327 ANMVSAVLGAFGASAPFALGKQIHALAIKRCFGGNTYVCNGLINMYSKCGELQESIRVFD 386
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
+ ++ ++I+ +AR H E F LF+ M + DV +L+ C++V S
Sbjct: 387 GTPSKNTVTWNSIIAAYAR-HGHGWEVFGLFESMEADGVKPTDVTFLSLLHGCSHVGSPR 445
Query: 352 LGRQI-HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD--KNVISWTSLIA 408
G +I + KY ++DM ++ ++ DA +AF E G + + W SL+
Sbjct: 446 KGLEILDSMPSKYGIHPKVEHYACVVDMLGRASQLDDA-KAFIEDGPFKDSALLWQSLMG 504
Query: 409 GYAKH---GYGHEAIE 421
+ H G G A E
Sbjct: 505 ACSFHKNSGVGECAAE 520
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 176/361 (48%), Gaps = 17/361 (4%)
Query: 166 LFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR 225
+ V ++L+ +Y +CG DA +F+ + +D VSWN++ L+ D+ L R M+
Sbjct: 57 VVVWNSLVAMYGRCGCRGDAVRVFDEMALRDSVSWNSL---LSASASATDALALLRRMLS 113
Query: 226 QGMKP---DCFTLGSILRASV---GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAK 279
D TL ++L A GG + +H L GL++ + +LI Y +
Sbjct: 114 AAPGAAACDHATLTTVLSACARAGGGTGSASLPAVHGLAASCGLDAEVSVGNALITAYFE 173
Query: 280 YGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCL 339
S SA +++ M ++I+ TA++SG AR + +S E+ LF+ M + + +
Sbjct: 174 CSSPGSAERVFDGMADRNVITWTAMVSGMARAERYS-ESLSLFRQM-RRAVDANRASYSS 231
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN 399
L CA + G+QIH A K D V + L+DMY+K G + DA R F D +
Sbjct: 232 SLLACAGSRAAREGQQIHGLAVKAGLETDLHVESELMDMYSKCGLMEDALRVFRSGQDPD 291
Query: 400 VISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFT 459
+S T ++AG+A++G EA L+ +M +G+ + ++L A + G ++
Sbjct: 292 EVSLTVILAGFAQNGLEEEAFRLFAEMVGKGIRVDANMVSAVLGAFGASAPFALGKQIHA 351
Query: 460 DMINKYRILPRAEHFSC--VVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
I + + C +++++++ G+L+ + + K T + W++I+ A + +G
Sbjct: 352 LAIKR---CFGGNTYVCNGLINMYSKCGELQESIRVFDGTPSKNTVT-WNSIIAAYARHG 407
Query: 518 N 518
+
Sbjct: 408 H 408
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 112/209 (53%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
++Y S L C +A R+ IH + G E++LH+ ++++ Y+K G + A + F
Sbjct: 227 ASYSSSLLACAGSRAAREGQQIHGLAVKAGLETDLHVESELMDMYSKCGLMEDALRVFRS 286
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+ + VS T +++G+AQNG +E A +F+ M+ G+R + S+ L A G
Sbjct: 287 GQDPDEVSLTVILAGFAQNGLEEEAFRLFAEMVGKGIRVDANMVSAVLGAFGASAPFALG 346
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ I K F N +V + L+++Y+KCG ++++ +F+ K+ V+WN++I A
Sbjct: 347 KQIHALAIKRCFGGNTYVCNGLINMYSKCGELQESIRVFDGTPSKNTVTWNSIIAAYARH 406
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G + F LF SM G+KP T S+L
Sbjct: 407 GHGWEVFGLFESMEADGVKPTDVTFLSLL 435
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 17/124 (13%)
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSYD-----------AAVGNALIDMYAKSGEIADA 388
+L C L LG +HA K S + V N+L+ MY + G DA
Sbjct: 17 LLARCGRAGDLRLGTSLHAIVAKNPSHFRLCPRRSCLQHVVVVWNSLVAMYGRCGCRGDA 76
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM--KHEGMVPND-VTFLSLLFAC 445
R FDEM ++ +SW SL++ A +A+ L ++M G D T ++L AC
Sbjct: 77 VRVFDEMALRDSVSWNSLLSASAS---ATDALALLRRMLSAAPGAAACDHATLTTVLSAC 133
Query: 446 SHTG 449
+ G
Sbjct: 134 ARAG 137
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 167/501 (33%), Positives = 285/501 (56%), Gaps = 11/501 (2%)
Query: 88 FDRMPER-NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
F+R ++ +V SW ++I+ A++G ALL FS+M + + + ++ A++AC+ +
Sbjct: 32 FNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFD 91
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
+ G+ + ++FV SAL+ +Y+ CG +EDA +F+ I ++D+VSW +MI G
Sbjct: 92 IFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRG 151
Query: 207 LAMQGFNDDSFWLFRSMM------RQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIK 260
+ G D+ LF+ ++ M D L S++ A IH +IK
Sbjct: 152 YDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIK 211
Query: 261 LGLESSNKLTGSLIDVYAK--YGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEA 318
G + + +L+D YAK G + A +++ ++ D +S +++S +A+ S EA
Sbjct: 212 RGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQS-GMSNEA 270
Query: 319 FDLFKDMILKKM-GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
F++F+ ++ K+ + + L +L ++ +L +G+ IH + D VG ++ID
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIID 330
Query: 378 MYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVT 437
MY K G + A +AFD M +KNV SWT++IAGY HG+ +A+EL+ M G+ PN +T
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390
Query: 438 FLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
F+S+L ACSH GL EGW F M ++ + P EH+ C+VDL R G L+ AY++I++M
Sbjct: 391 FVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450
Query: 498 NIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNAR 557
+KP + +WS++L AC I+ N L E++ LF+++ Y++LS+IY AG W +
Sbjct: 451 KMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVE 510
Query: 558 KTRKLMEERSLRKNPGYSFLQ 578
+ R +M+ R L K PG+S L+
Sbjct: 511 RVRMIMKNRGLVKPPGFSLLE 531
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 188/373 (50%), Gaps = 14/373 (3%)
Query: 53 HAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYD 112
H GY+S++ +S+ +I+ Y+ G + ARK FD +P+R++VSWT+MI GY NG
Sbjct: 99 HQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNA 158
Query: 113 ENALLVFSAML------RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENL 166
+A+ +F +L + + S + AC+R+ I + K F +
Sbjct: 159 LDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGV 218
Query: 167 FVKSALLDLYAKC--GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMM 224
V + LLD YAK G + A +F++I KD VS+N+++ A G ++++F +FR ++
Sbjct: 219 SVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLV 278
Query: 225 RQGMKP-DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
+ + + TL ++L A L IHD +I++GLE + S+ID+Y K G +
Sbjct: 279 KNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRV 338
Query: 284 RSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNI 343
+A + + M ++ S TA+I+G+ H+ +A +LF MI + + + +L
Sbjct: 339 ETARKAFDRMKNKNVRSWTAMIAGYGM-HGHAAKALELFPAMIDSGVRPNYITFVSVLAA 397
Query: 344 CANVASLNLG--RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK-NV 400
C++ A L++ R +A ++ ++D+ ++G + A M K +
Sbjct: 398 CSH-AGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDS 456
Query: 401 ISWTSLIAGYAKH 413
I W+SL+A H
Sbjct: 457 IIWSSLLAACRIH 469
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 154/286 (53%), Gaps = 5/286 (1%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGD--VLSA 84
LD +S++ C A+ IH+ +I G++ + + ++ YAK G+ V A
Sbjct: 180 FLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVA 239
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA-NQFTYSSALRACAR 143
RK FD++ +++ VS+ +++S YAQ+G A VF ++++ V N T S+ L A +
Sbjct: 240 RKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSH 299
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
L+ G+ I + + +++ V ++++D+Y KCG +E A F+R++ K+V SW AM
Sbjct: 300 SGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAM 359
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLG 262
I G M G + LF +M+ G++P+ T S+L A S G+ + + + + G
Sbjct: 360 IAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFG 419
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALISG 307
+E + G ++D+ + G ++ AY L + M +K D I ++L++
Sbjct: 420 VEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465
>gi|4049345|emb|CAA22570.1| putative protein [Arabidopsis thaliana]
gi|7270147|emb|CAB79960.1| putative protein [Arabidopsis thaliana]
Length = 688
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 177/579 (30%), Positives = 305/579 (52%), Gaps = 10/579 (1%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGY 61
N + + F Q+ + + D TY + L FC+ + + + ++ G
Sbjct: 71 NTILSGFDDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGL 130
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG-YDENALLVFS 120
ES+L + I Y++ G AR+ FD M ++++SW +++SG +Q G + A+++F
Sbjct: 131 ESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFR 190
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M+R GV + +++S + C L+ R I G K + L V + L+ Y+KCG
Sbjct: 191 DMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCG 250
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+E +F ++ ++VVSW MI DD+ +F +M G+ P+ T ++
Sbjct: 251 VLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEVTFVGLIN 305
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
A ++ + +IH L IK G S + S I +YAK+ ++ A + + + +IIS
Sbjct: 306 AVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIIS 365
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNL--GRQIHA 358
A+ISGFA++ S EA +F + M ++ +LN A +++ G++ HA
Sbjct: 366 WNAMISGFAQN-GFSHEALKMFLSAAAETMP-NEYTFGSVLNAIAFAEDISVKQGQRCHA 423
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHE 418
K + V +AL+DMYAK G I ++ + F+EM KN WTS+I+ Y+ HG
Sbjct: 424 HLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFET 483
Query: 419 AIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVV 478
+ L+ KM E + P+ VTFLS+L AC+ G+ +G+E+F MI Y + P EH+SC+V
Sbjct: 484 VMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMV 543
Query: 479 DLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSV 538
D+ R G+L+ A ++ ++ P S+ ++LG+C ++GN +G A +M+PE S
Sbjct: 544 DMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSG 603
Query: 539 NYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
+YV + NIY WD A + RK M ++++ K G+S++
Sbjct: 604 SYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWI 642
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 138/497 (27%), Positives = 256/497 (51%), Gaps = 29/497 (5%)
Query: 34 MSLLQFCIDKKAER----QAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFD 89
M + C+ KA R + IH T+G+ S + +S V+ Y K G +A F+
Sbjct: 1 MDEVTLCLALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFE 60
Query: 90 RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG 149
+ + +VVSW ++SG+ N + AL M +GV + FTYS+AL C
Sbjct: 61 NLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLL 117
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
G +Q ++ K +L V ++ + +Y++ G A +F+ + KD++SWN+++ GL+
Sbjct: 118 GLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQ 177
Query: 210 QG-FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
+G F ++ +FR MMR+G++ D + S++ +L QIH L IK G ES +
Sbjct: 178 EGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLE 237
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ L+ Y+K G + + ++ M + +++S T +IS +DD A +F +M
Sbjct: 238 VGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS-NKDD-----AVSIFLNMRFD 291
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ ++V ++N + G +IH K + +VGN+ I +YAK + DA
Sbjct: 292 GVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDA 351
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS-- 446
+AF+++ + +ISW ++I+G+A++G+ HEA++++ E M PN+ TF S+L A +
Sbjct: 352 KKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFA 410
Query: 447 -----HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
G C L +N ++ A ++D++A+RG ++ + + +M+ K
Sbjct: 411 EDISVKQGQRCHA-HLLKLGLNSCPVVSSA-----LLDMYAKRGNIDESEKVFNEMSQK- 463
Query: 502 TASLWSAILGACSIYGN 518
+W++I+ A S +G+
Sbjct: 464 NQFVWTSIISAYSSHGD 480
>gi|30689384|ref|NP_194969.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75147159|sp|Q84MA3.1|PP345_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g32430, mitochondrial; Flags: Precursor
gi|30102674|gb|AAP21255.1| At4g32430 [Arabidopsis thaliana]
gi|110742925|dbj|BAE99358.1| hypothetical protein [Arabidopsis thaliana]
gi|332660658|gb|AEE86058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 177/579 (30%), Positives = 305/579 (52%), Gaps = 10/579 (1%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGY 61
N + + F Q+ + + D TY + L FC+ + + + ++ G
Sbjct: 146 NTILSGFDDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGL 205
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG-YDENALLVFS 120
ES+L + I Y++ G AR+ FD M ++++SW +++SG +Q G + A+++F
Sbjct: 206 ESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFR 265
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M+R GV + +++S + C L+ R I G K + L V + L+ Y+KCG
Sbjct: 266 DMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCG 325
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+E +F ++ ++VVSW MI DD+ +F +M G+ P+ T ++
Sbjct: 326 VLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEVTFVGLIN 380
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
A ++ + +IH L IK G S + S I +YAK+ ++ A + + + +IIS
Sbjct: 381 AVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIIS 440
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNL--GRQIHA 358
A+ISGFA++ S EA +F + M ++ +LN A +++ G++ HA
Sbjct: 441 WNAMISGFAQN-GFSHEALKMFLSAAAETMP-NEYTFGSVLNAIAFAEDISVKQGQRCHA 498
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHE 418
K + V +AL+DMYAK G I ++ + F+EM KN WTS+I+ Y+ HG
Sbjct: 499 HLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFET 558
Query: 419 AIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVV 478
+ L+ KM E + P+ VTFLS+L AC+ G+ +G+E+F MI Y + P EH+SC+V
Sbjct: 559 VMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMV 618
Query: 479 DLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSV 538
D+ R G+L+ A ++ ++ P S+ ++LG+C ++GN +G A +M+PE S
Sbjct: 619 DMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSG 678
Query: 539 NYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
+YV + NIY WD A + RK M ++++ K G+S++
Sbjct: 679 SYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWI 717
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 138/498 (27%), Positives = 257/498 (51%), Gaps = 29/498 (5%)
Query: 33 YMSLLQFCIDKKAER----QAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
+M + C+ KA R + IH T+G+ S + +S V+ Y K G +A F
Sbjct: 75 HMDEVTLCLALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIF 134
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ + + +VVSW ++SG+ N + AL M +GV + FTYS+AL C
Sbjct: 135 ENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFL 191
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G +Q ++ K +L V ++ + +Y++ G A +F+ + KD++SWN+++ GL+
Sbjct: 192 LGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLS 251
Query: 209 MQG-FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
+G F ++ +FR MMR+G++ D + S++ +L QIH L IK G ES
Sbjct: 252 QEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLL 311
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
++ L+ Y+K G + + ++ M + +++S T +IS +DD A +F +M
Sbjct: 312 EVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS-NKDD-----AVSIFLNMRF 365
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ ++V ++N + G +IH K + +VGN+ I +YAK + D
Sbjct: 366 DGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALED 425
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS- 446
A +AF+++ + +ISW ++I+G+A++G+ HEA++++ E M PN+ TF S+L A +
Sbjct: 426 AKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAF 484
Query: 447 ------HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIK 500
G C L +N ++ A ++D++A+RG ++ + + +M+ K
Sbjct: 485 AEDISVKQGQRCHA-HLLKLGLNSCPVVSSA-----LLDMYAKRGNIDESEKVFNEMSQK 538
Query: 501 PTASLWSAILGACSIYGN 518
+W++I+ A S +G+
Sbjct: 539 -NQFVWTSIISAYSSHGD 555
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 203/433 (46%), Gaps = 20/433 (4%)
Query: 84 ARKAFDRMPERN-VVSWTAMISGYAQNGYDENALLVFSAMLRSGV---RANQFTYSSALR 139
A K FD +RN S IS + AL +F L+ G ++ T AL+
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 140 ACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS 199
AC L+ G I G F + V +A++ +Y K G ++A +FE + DVVS
Sbjct: 87 ACRGD--LKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVS 144
Query: 200 WNAMIGGLAMQGFNDDSFWL--FRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDL 257
WN + + GF+D+ L M G+ D FT + L VG + Q+
Sbjct: 145 WNTI-----LSGFDDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQST 199
Query: 258 IIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKE 317
++K GLES + S I +Y++ GS R A +++ M D+IS +L+SG +++ E
Sbjct: 200 VVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFE 259
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
A +F+DM+ + + +D V ++ C + L L RQIH K VGN L+
Sbjct: 260 AVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMS 319
Query: 378 MYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVT 437
Y+K G + F +M ++NV+SWT++I+ +A+ ++ M+ +G+ PN+VT
Sbjct: 320 RYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKD-----DAVSIFLNMRFDGVYPNEVT 374
Query: 438 FLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
F+ L+ A EG ++ I K + + + L+A+ LE A +
Sbjct: 375 FVGLINAVKCNEQIKEGLKIHGLCI-KTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDI 433
Query: 498 NIKPTASLWSAIL 510
+ S W+A++
Sbjct: 434 TFREIIS-WNAMI 445
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 10/208 (4%)
Query: 313 NHSKEAFDLFKDMI-LKKMG--IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDA 369
N A +FK+ + L G +D+V LCL L C L G QIH F+ +
Sbjct: 54 NSPARALSIFKENLQLGYFGRHMDEVTLCLALKACR--GDLKRGCQIHGFSTTSGFTSFV 111
Query: 370 AVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE 429
V NA++ MY K+G +A F+ + D +V+SW ++++G+ + A+ +MK
Sbjct: 112 CVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSA 168
Query: 430 GMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLES 489
G+V + T+ + L C + G +L + ++ K + + + +++R G
Sbjct: 169 GVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVV-KTGLESDLVVGNSFITMYSRSGSFRG 227
Query: 490 AYNMIRQMNIKPTASLWSAILGACSIYG 517
A + +M+ K S W+++L S G
Sbjct: 228 ARRVFDEMSFKDMIS-WNSLLSGLSQEG 254
>gi|147797709|emb|CAN61058.1| hypothetical protein VITISV_011618 [Vitis vinifera]
Length = 529
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 174/533 (32%), Positives = 293/533 (54%), Gaps = 14/533 (2%)
Query: 56 IITNGYESNLHLSTKVIIFYAKV---GDVLSARKAFDRMPERNVVSWTAMISGYAQNGYD 112
+ITNG+ N L++K+++ +A + G AR+ D++ + +W +I GY +
Sbjct: 1 MITNGHLHNPTLASKLVVSFASITLPGTTSVARRIADQIDGLDTYTWNTIIRGYLEGNDP 60
Query: 113 ENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSAL 172
E A+L+++ + + G++ + +T ++AC + G I G I K F + +++AL
Sbjct: 61 EEAILIYNHVRKKGLKVDTYTLVFVIKACGLRPVILEGEQIHGQIFKLGFEFEVIIQTAL 120
Query: 173 LDLYA----KCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGM 228
L +Y CG + +F+ + ++D+V WNA+I A + M+ +
Sbjct: 121 LSMYGLFDEDCGLQQ----IFDEMPQRDLVMWNALIAAYAHGNCPYKVREVSYDMVSSNV 176
Query: 229 KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQ 288
KP+ T SIL L + +H + K +E + +LIDVY+K GSIR A Q
Sbjct: 177 KPNGVTAVSILSVCSSLRALREGKAVHGYVTKNLIEXDVFVHNALIDVYSKCGSIRDAVQ 236
Query: 289 LYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
+++ M +++S T+LI+G++ D+N EA FK M + + D++ + ++ +C+ +
Sbjct: 237 VFQLMPMRNVVSWTSLINGYS-DNNCPNEALGFFKQMEAENIRPDEITVLGVVCMCSKLR 295
Query: 349 SLNLGRQIHAFAFKYQSSYDA-AVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI 407
S LG I + K ++ A+ N L+DM+AK G I A + FD M +K ++SWT +I
Sbjct: 296 SFELGEWISQYVVKTGLVKESPAIANVLMDMHAKCGNIKRACQIFDGMEEKTIVSWTIMI 355
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRI 467
G A +G+G A+ + +M+ EG P+ + FLSLL ACSH GL EGW F+ M Y I
Sbjct: 356 QGLAMYGHGLSALVRFCQMQREGFKPDSLVFLSLLSACSHAGLVDEGWRCFSSMEADYHI 415
Query: 468 LPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAAR 527
P EH+ C+VD+ R G ++ A+ ++ M IKP +W +LGAC GN SL
Sbjct: 416 XPWMEHYGCMVDILCRAGLVDEAFKFVQNMPIKPDMIVWRTLLGACXXQGNISLANQVMN 475
Query: 528 NLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK-NPGYSFLQS 579
L ++ P+KS +YV+LSN++ + WDN + RK M +R + K +PG SF+++
Sbjct: 476 XLCELGPKKSEDYVLLSNLFASNAEWDNVXEVRKEMGDRGVTKQDPGCSFIEA 528
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 205/424 (48%), Gaps = 11/424 (2%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D T + +++ C + + IH I G+E + + T ++ Y + ++
Sbjct: 77 VDTYTLVFVIKACGLRPVILEGEQIHGQIFKLGFEFEVIIQTALLSMYGLFDEDCGLQQI 136
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD MP+R++V W A+I+ YA V M+ S V+ N T S L C+ +R L
Sbjct: 137 FDEMPQRDLVMWNALIAAYAHGNCPYKVREVSYDMVSSNVKPNGVTAVSILSVCSSLRAL 196
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G+ + G + K ++FV +AL+D+Y+KCG I DA +F+ + ++VVSW ++I G
Sbjct: 197 REGKAVHGYVTKNLIEXDVFVHNALIDVYSKCGSIRDAVQVFQLMPMRNVVSWTSLINGY 256
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFT-LGSILRAS-VGGIELMK-ISQIHDLIIKLGL- 263
+ +++ F+ M + ++PD T LG + S + EL + ISQ ++K GL
Sbjct: 257 SDNNCPNEALGFFKQMEAENIRPDEITVLGVVCMCSKLRSFELGEWISQ---YVVKTGLV 313
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
+ S + L+D++AK G+I+ A Q++ M + I+S T +I G A H A F
Sbjct: 314 KESPAIANVLMDMHAKCGNIKRACQIFDGMEEKTIVSWTIMIQGLAM-YGHGLSALVRFC 372
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
M + D ++ +L+ C++ ++ G R + Y ++D+ ++
Sbjct: 373 QMQREGFKPDSLVFLSLLSACSHAGLVDEGWRCFSSMEADYHIXPWMEHYGCMVDILCRA 432
Query: 383 GEIADANRAFDEMGDK-NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN-DVTFLS 440
G + +A + M K ++I W +L+ G A ++ + G + D LS
Sbjct: 433 GLVDEAFKFVQNMPIKPDMIVWRTLLGACXXQGNISLANQVMNXLCELGPKKSEDYVLLS 492
Query: 441 LLFA 444
LFA
Sbjct: 493 NLFA 496
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 180/561 (32%), Positives = 295/561 (52%), Gaps = 6/561 (1%)
Query: 24 PDTLLDPS-TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVL 82
P + +P+ T +SL +F K H ++A I+ N +L + Y ++G +
Sbjct: 8 PISSRNPTKTLLSLFRF---TKTLASNHQLNAQILVNALHRSLLFGPMIFGAYIQLGSLH 64
Query: 83 SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA 142
A KAF+ + N+ SW +++ +++N + L +F ML+ G + F A++AC
Sbjct: 65 VASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACF 124
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
+ QG ++ K R + +V AL+++Y + G +E+A +FE + K+ V W
Sbjct: 125 GLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGV 184
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
MI G F LF M R G + D F + +++A + H L IK
Sbjct: 185 MIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKN 244
Query: 263 LESSNK-LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDL 321
SN L SL+D+Y K G + A +L+ + D++ +A+I+GFAR+ + E+ +
Sbjct: 245 FIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARN-GRALESISM 303
Query: 322 FKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
F+ M+ + + V ++ C+++ SL GR +H + + D + IDMYAK
Sbjct: 304 FRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAK 363
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
G I A R F ++ +KNV SW+++I G+ HG EA+ L+ +M+ +PN VTF+S+
Sbjct: 364 CGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSV 423
Query: 442 LFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
L ACSH+G EGW F M Y I P EH++C+VDL R G+++ A + I M +P
Sbjct: 424 LSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEP 483
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRK 561
AS W A+LGAC I+ L E A+ L +E ++S YV+LSNIY G W+ +KTR
Sbjct: 484 GASAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMWEMVKKTRL 543
Query: 562 LMEERSLRKNPGYSFLQSSKK 582
M E+ + K G++ ++ +K
Sbjct: 544 KMCEKGIHKIVGFTSIEIEEK 564
>gi|326507410|dbj|BAK03098.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 698
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 180/543 (33%), Positives = 296/543 (54%), Gaps = 30/543 (5%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H+ + G N+ +T ++ YAK G A + FD MPERN VSW A+++GY ++G
Sbjct: 123 LHSLAVKAGLADNVFSATALLHMYAKCGRTRDACRLFDGMPERNTVSWNALVAGYVESGK 182
Query: 112 DENALLVFSAMLRSGVRANQFTYSSAL-----RACARMRWLQGGRMIQGSIQKGRFVENL 166
A+ +F M R G ++ T+++ L C M L G + GS L
Sbjct: 183 VAPAVQLFVEMEREGFLPDEATFAALLTVVNDSTCFLMHQLHGKIVKYGS------ALGL 236
Query: 167 FVKSALLDLYAKCGWIEDAWILFERI-ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR 225
V +A + Y++CG + ++ +F+ I +R D++SWNAM+G A G ++ F SMMR
Sbjct: 237 IVLNAAITAYSQCGALANSRRIFDEIGDRSDLISWNAMLGAYATHGMEHEAMRFFASMMR 296
Query: 226 -QGMKPDCFTLGSILRASV-----GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAK 279
G++PD ++ SI+ A GG + IH L+ K G E + +LI +Y +
Sbjct: 297 ASGVQPDMYSFTSIISACAEHRDHGG------TVIHGLVSKNGFEGVTHVCNALIAMYTR 350
Query: 280 YGS---IRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVI 336
+ + AY+ + S+L D +S ++++G+++ S +A F+ M + + D+
Sbjct: 351 FSENCMMEDAYKCFDSLLLKDTVSWNSMLTGYSQH-GLSADALRFFRCMQSENITTDEYA 409
Query: 337 LCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG 396
L C+++A L LGRQIH + + + V ++LI MY+KSG + DA ++F+E
Sbjct: 410 FSAALRSCSDLALLRLGRQIHGLVIRSGFASNNFVSSSLIFMYSKSGILDDAMKSFEEAD 469
Query: 397 DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND-VTFLSLLFACSHTGLTCEGW 455
+ + W S++ GYA+HG L+ +M E VP D +TF+ L+ ACSH GL EG
Sbjct: 470 KSSSVPWNSMMFGYAQHGKAQAVRSLFNQML-ELKVPLDHITFVGLITACSHAGLVDEGS 528
Query: 456 ELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSI 515
E+ M ++Y I R EH++C +DL+ R GQL+ A +I M +P A +W +LGAC +
Sbjct: 529 EILNTMESRYGIPLRMEHYACGIDLYGRAGQLDKAKELIDSMPFEPDAMVWMTLLGACRV 588
Query: 516 YGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYS 575
+GN L A +L + EP + YV+LSN+Y+ G W + +K M+ + L K PG+S
Sbjct: 589 HGNMELASDVASHLLEAEPRQHSTYVLLSNMYSGLGMWSDRAIVQKEMKNKGLSKVPGWS 648
Query: 576 FLQ 578
+++
Sbjct: 649 WIE 651
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 135/527 (25%), Positives = 249/527 (47%), Gaps = 25/527 (4%)
Query: 53 HAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYD 112
HA ++ +G S + + + + +AR+ FD +P + SW ++++ + G
Sbjct: 23 HATLLKSGVTSPTPWNQLLTAYSVSSPGLAAARRLFDEIPRLDAASWNSLLAAHVSIGAH 82
Query: 113 ENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSAL 172
A + AM G+ AN F SALR+ A M G + K +N+F +AL
Sbjct: 83 PAACRLLRAMHERGLAANTFALGSALRSAAAMGCSALGTQLHSLAVKAGLADNVFSATAL 142
Query: 173 LDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDC 232
L +YAKCG DA LF+ + ++ VSWNA++ G G + LF M R+G PD
Sbjct: 143 LHMYAKCGRTRDACRLFDGMPERNTVSWNALVAGYVESGKVAPAVQLFVEMEREGFLPDE 202
Query: 233 FTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRS 292
T ++L V + Q+H I+K G + + I Y++ G++ ++ +++
Sbjct: 203 ATFAALLTV-VNDSTCFLMHQLHGKIVKYGSALGLIVLNAAITAYSQCGALANSRRIFDE 261
Query: 293 ML-KTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI--DDVILCLMLNICANVAS 349
+ ++D+IS A++ +A EA F M ++ G+ D +++ CA
Sbjct: 262 IGDRSDLISWNAMLGAYA-THGMEHEAMRFFASM-MRASGVQPDMYSFTSIISACAEHRD 319
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE---IADANRAFDEMGDKNVISWTSL 406
+ G IH K V NALI MY + E + DA + FD + K+ +SW S+
Sbjct: 320 -HGGTVIHGLVSKNGFEGVTHVCNALIAMYTRFSENCMMEDAYKCFDSLLLKDTVSWNSM 378
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYR 466
+ GY++HG +A+ ++ M+ E + ++ F + L +CS L G ++ +I R
Sbjct: 379 LTGYSQHGLSADALRFFRCMQSENITTDEYAFSAALRSCSDLALLRLGRQIHGLVI---R 435
Query: 467 ILPRAEHF--SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGEL 524
+ +F S ++ ++++ G L+ A + + K ++ W++++ + +G
Sbjct: 436 SGFASNNFVSSSLIFMYSKSGILDDAMKSFEEAD-KSSSVPWNSMMFGYAQHGKAQ---- 490
Query: 525 AARNLFD--MEPEKSVNYVVLSNIYTA---AGAWDNARKTRKLMEER 566
A R+LF+ +E + ++++ + TA AG D + ME R
Sbjct: 491 AVRSLFNQMLELKVPLDHITFVGLITACSHAGLVDEGSEILNTMESR 537
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 135/269 (50%), Gaps = 5/269 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGD---VLSAR 85
D ++ S++ C + + + +IH + NG+E H+ +I Y + + + A
Sbjct: 303 DMYSFTSIISACAEHR-DHGGTVIHGLVSKNGFEGVTHVCNALIAMYTRFSENCMMEDAY 361
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
K FD + ++ VSW +M++GY+Q+G +AL F M + +++ +S+ALR+C+ +
Sbjct: 362 KCFDSLLLKDTVSWNSMLTGYSQHGLSADALRFFRCMQSENITTDEYAFSAALRSCSDLA 421
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
L+ GR I G + + F N FV S+L+ +Y+K G ++DA FE ++ V WN+M+
Sbjct: 422 LLRLGRQIHGLVIRSGFASNNFVSSSLIFMYSKSGILDDAMKSFEEADKSSSVPWNSMMF 481
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFT-LGSILRASVGGIELMKISQIHDLIIKLGLE 264
G A G LF M+ + D T +G I S G+ ++ + + G+
Sbjct: 482 GYAQHGKAQAVRSLFNQMLELKVPLDHITFVGLITACSHAGLVDEGSEILNTMESRYGIP 541
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ ID+Y + G + A +L SM
Sbjct: 542 LRMEHYACGIDLYGRAGQLDKAKELIDSM 570
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 99/208 (47%), Gaps = 6/208 (2%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ G AL+F + + D + + L+ C D R IH +I +G+ SN
Sbjct: 384 QHGLSADALRFFRCMQSENITTDEYAFSAALRSCSDLALLRLGRQIHGLVIRSGFASNNF 443
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+S+ +I Y+K G + A K+F+ + + V W +M+ GYAQ+G + +F+ ML
Sbjct: 444 VSSSLIFMYSKSGILDDAMKSFEEADKSSSVPWNSMMFGYAQHGKAQAVRSLFNQMLELK 503
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK--SALLDLYAKCGWIED 184
V + T+ + AC+ + G I +++ R+ L ++ + +DLY + G ++
Sbjct: 504 VPLDHITFVGLITACSHAGLVDEGSEILNTMES-RYGIPLRMEHYACGIDLYGRAGQLDK 562
Query: 185 AWILFERIE-RKDVVSWNAMIGGLAMQG 211
A L + + D + W ++G + G
Sbjct: 563 AKELIDSMPFEPDAMVWMTLLGACRVHG 590
>gi|222636858|gb|EEE66990.1| hypothetical protein OsJ_23896 [Oryza sativa Japonica Group]
Length = 659
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 169/476 (35%), Positives = 271/476 (56%), Gaps = 23/476 (4%)
Query: 119 FSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
+ M ++GV + FTY S LRACA R L GR + NLF ++AL+ +YAK
Sbjct: 138 YQEMGKNGVLPDVFTYPSVLRACAEARELVLGRAVHMHAAGAGMDGNLFFQNALMSMYAK 197
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
CG + A +F+ + ++DVVSWN+MI A G ++ LFR M +G +P +G I
Sbjct: 198 CGDLASARKVFDGMVQRDVVSWNSMISSYAAVGQWAEAMELFRRMRDEGTEP----VGLI 253
Query: 239 LRASVGGIELMKIS------------------QIHDLIIKLGLESSNKLTGSLIDVYAKY 280
GG E+ ++ +IH L +++ + ++ +LI +YA+
Sbjct: 254 REMVRGGAEVDYVTLVIGLNACSRVGWLRLGKEIHGLAVRMCCDQVESVSNALITMYARC 313
Query: 281 GSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLM 340
+ A L+R + +++ ++S FA D ++EA +F++MI + + + V +
Sbjct: 314 KDMECARMLFRMLECPGVVTWNTMLSSFALSDC-AEEASSIFREMICRGVKPNYVTVVTY 372
Query: 341 LNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNV 400
L +CA VA+L G+++H K+ + N+LIDMY+KSG ++ A FD M D ++
Sbjct: 373 LALCARVANLQHGQELHGHIVKHGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDCDM 432
Query: 401 ISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTD 460
IS+TS+IAGY G G A+ L+++M G+ P+ + +++L ACSH+GL EG ELF
Sbjct: 433 ISYTSMIAGYGMQGKGTVALRLFEQMIDSGIKPDHIIMVTVLSACSHSGLVLEGEELFNK 492
Query: 461 MINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTS 520
M+ Y I P+ EH+SC++DL+AR G LE A M+ PT+++W+A++GAC GN
Sbjct: 493 MVISYGIKPQMEHYSCMIDLYARAGLLEKAEEMLDHTPFPPTSTMWAALVGACHDRGNIE 552
Query: 521 LGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSF 576
+GE AAR L +M E + +YV+++N+Y AAG WD RKLM + + K PG ++
Sbjct: 553 IGERAARKLLEMRTENAGHYVLIANMYAAAGCWDELATVRKLMRDLGVTKAPGLAW 608
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 195/405 (48%), Gaps = 17/405 (4%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
L D TY S+L+ C + + +H H G + NL ++ YAK GD+ SAR
Sbjct: 146 VLPDVFTYPSVLRACAEARELVLGRAVHMHAAGAGMDGNLFFQNALMSMYAKCGDLASAR 205
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVF--------------SAMLRSGVRANQ 131
K FD M +R+VVSW +MIS YA G A+ +F M+R G +
Sbjct: 206 KVFDGMVQRDVVSWNSMISSYAAVGQWAEAMELFRRMRDEGTEPVGLIREMVRGGAEVDY 265
Query: 132 FTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER 191
T L AC+R+ WL+ G+ I G + + V +AL+ +YA+C +E A +LF
Sbjct: 266 VTLVIGLNACSRVGWLRLGKEIHGLAVRMCCDQVESVSNALITMYARCKDMECARMLFRM 325
Query: 192 IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI 251
+E VV+WN M+ A+ +++ +FR M+ +G+KP+ T+ + L L
Sbjct: 326 LECPGVVTWNTMLSSFALSDCAEEASSIFREMICRGVKPNYVTVVTYLALCARVANLQHG 385
Query: 252 SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD 311
++H I+K G + L SLID+Y+K G + A ++ +M D+IS T++I+G+
Sbjct: 386 QELHGHIVKHGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDCDMISYTSMIAGYGMQ 445
Query: 312 DNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI-HAFAFKYQSSYDAA 370
+ A LF+ MI + D +I+ +L+ C++ + G ++ + Y
Sbjct: 446 GKGTV-ALRLFEQMIDSGIKPDHIIMVTVLSACSHSGLVLEGEELFNKMVISYGIKPQME 504
Query: 371 VGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHG 414
+ +ID+YA++G + A D W +L+ G
Sbjct: 505 HYSCMIDLYARAGLLEKAEEMLDHTPFPPTSTMWAALVGACHDRG 549
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 116/282 (41%), Gaps = 57/282 (20%)
Query: 253 QIHDLIIKLGLESSNKLTGSLIDVYAKYGSI-------RSAYQLYRSMLKTDIISCTALI 305
Q+H L + LGL L L+ VY + S+ +A Y+ M K ++
Sbjct: 94 QLHALSLSLGLSRHPILLPRLLSVYTSHPSLLPSAASVAAALAAYQEMGKNGVLP----- 148
Query: 306 SGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS 365
D+F +L CA L LGR +H A
Sbjct: 149 --------------DVFT-------------YPSVLRACAEARELVLGRAVHMHAAGAGM 181
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKK 425
+ NAL+ MYAK G++A A + FD M ++V+SW S+I+ YA G EA+EL+++
Sbjct: 182 DGNLFFQNALMSMYAKCGDLASARKVFDGMVQRDVVSWNSMISSYAAVGQWAEAMELFRR 241
Query: 426 MKHEGMVP--------------NDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
M+ EG P + VT + L ACS G G E+ + +
Sbjct: 242 MRDEGTEPVGLIREMVRGGAEVDYVTLVIGLNACSRVGWLRLGKEIHGLAVRM--CCDQV 299
Query: 472 EHFS-CVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
E S ++ ++AR +E A + R + P W+ +L +
Sbjct: 300 ESVSNALITMYARCKDMECARMLFRMLEC-PGVVTWNTMLSS 340
>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
Length = 745
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 176/556 (31%), Positives = 303/556 (54%), Gaps = 2/556 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D T S+L C + ++ G+E ++ ++T +I +AK G + A
Sbjct: 66 IDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESV 125
Query: 88 FDRMPE-RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
F M R+++S TAMI Y ++G ++ AL + M G+ + FTY++ L AC+ +
Sbjct: 126 FRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACSSPDF 185
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
L G+ I I + + N+ V++AL+ +YAKCG ++D+ LF ++ KDVVSWNAMI
Sbjct: 186 LLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAA 245
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
+ G + D+F LF M G PD +T SIL A L +H I G +
Sbjct: 246 YTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRD 305
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ +LI ++ + GS+ SA + + S+ K ++ + +++ +A+ D K+A L+K+M+
Sbjct: 306 FAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDK-GKDALFLYKNML 364
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
L+ D +++ CA++ +L G+ IH + D +G AL++MYAK G +A
Sbjct: 365 LEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLA 424
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
DA ++FD + +K+V+SW+++IA A+HG+ EA+EL M +G+ N+VT S+L ACS
Sbjct: 425 DAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACS 484
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
H G EG + F + + I E+ +DL R G L+ A +++ M K +
Sbjct: 485 HGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVAL 544
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
+LG C ++G+ G+ + + +EPE +YV+L+N+Y AAG WD+ K R+ M ++
Sbjct: 545 VTLLGGCKVHGDVRRGKALTKRIVALEPENPGSYVLLNNMYAAAGRWDDVAKLRRYMRKK 604
Query: 567 SLRKNPGYSFLQSSKK 582
+++ G S ++ K
Sbjct: 605 GVKRQTGCSSIEYRDK 620
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 145/460 (31%), Positives = 236/460 (51%), Gaps = 18/460 (3%)
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
L+ +I Y K AR+ FDR+ +RN SW+ ++ Y QN + AL V+ M+R
Sbjct: 4 LANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVRKE 63
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
+ + +T SS L AC ++ ++ GRM+Q ++ F +++ V ++L+ L+AKCG +E+A
Sbjct: 64 ISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAE 123
Query: 187 ILFERI-ERKDVVSWNAMIGGLAMQGFND---DSFWLFRSMMRQGMKPDCFTLGSILRAS 242
+F + +D++S AMIG G ND D++W RS QG++PD FT +IL A
Sbjct: 124 SVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRS---QGLEPDAFTYAAILGAC 180
Query: 243 VGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCT 302
L+ IH I++ + + +LI +YAK GS++ + L+ +M D++S
Sbjct: 181 SSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWN 240
Query: 303 ALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK 362
A+I+ + H K+AF LF M D +L CA+ L GR +H
Sbjct: 241 AMIAAYTL-YGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITA 299
Query: 363 YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIEL 422
D A+ N LI M+ + G + A R F + K + +W +++A YA+ G +A+ L
Sbjct: 300 RGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFL 359
Query: 423 YKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG---WELFTDM-INKYRILPRAEHFSCVV 478
YK M EG P+ TF S++ +C+ G EG E T K IL A +V
Sbjct: 360 YKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTA-----LV 414
Query: 479 DLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
+++A+ G L A ++ K S WSA++ A + +G+
Sbjct: 415 NMYAKCGSLADAKKSFDGISNKDVVS-WSAMIAASAQHGH 453
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 175/362 (48%), Gaps = 30/362 (8%)
Query: 165 NLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMM 224
+ F+ + ++ +Y KC EDA +F+RI++++ SW+ ++ ++ +++ M+
Sbjct: 1 DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60
Query: 225 RQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIR 284
R+ + D +TL S+L A +++ + + +LG E + SLI ++AK G +
Sbjct: 61 RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120
Query: 285 SAYQLYRSM-LKTDIISCTALISGFARDDNHSKE--AFDLFKDMILKKMGIDDVILCLML 341
A ++RSM DIIS TA+I + R H K A D + M + + D +L
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVR---HGKNDLALDTYWKMRSQGLEPDAFTYAAIL 177
Query: 342 NICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVI 401
C++ L G+ IH + + + +V NALI MYAK G + D+ F M K+V+
Sbjct: 178 GACSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVV 237
Query: 402 SWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS-----------HTGL 450
SW ++IA Y +G+ +A L+ +M G P+ TF S+L AC+ H +
Sbjct: 238 SWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRI 297
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
T G++ M N ++ +F R G LESA + K + W+ +L
Sbjct: 298 TARGFDRDFAMQNN------------LISMFTRCGSLESARRYFYSIEKKELGA-WNTML 344
Query: 511 GA 512
A
Sbjct: 345 AA 346
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 1/154 (0%)
Query: 368 DAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMK 427
D + N +I MY K DA + FD + +N SW+ L+ Y ++ EA+E+YK+M
Sbjct: 1 DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60
Query: 428 HEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQL 487
+ + + T S+L AC+ L E + + + ++ LFA+ G L
Sbjct: 61 RKEISIDAYTLSSVLAACTKL-LDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCL 119
Query: 488 ESAYNMIRQMNIKPTASLWSAILGACSIYGNTSL 521
E A ++ R M +A++GA +G L
Sbjct: 120 EEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDL 153
>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 200/677 (29%), Positives = 326/677 (48%), Gaps = 136/677 (20%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFY---------------- 75
T +SLL+ ++ Q +++HAH+I G+ S +++ K++I Y
Sbjct: 23 TCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEF 82
Query: 76 ---------------AKVGDVLSARKAFDRMPERN------------------------- 95
+ G+++ AR FD MPERN
Sbjct: 83 DGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFE 142
Query: 96 ------VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG 149
VVSWTA ISG+ +NG + AL +F +L SGVR N T++S +RAC +
Sbjct: 143 RNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGL 202
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSW--------- 200
G I G + K F L V ++L+ L + G I+ A +F+R+E++DVVSW
Sbjct: 203 GMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVE 262
Query: 201 ----------------------NAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD--CF--T 234
+AMI + G+ +++ LF M+++G KP+ CF T
Sbjct: 263 TGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACT 322
Query: 235 LGSI--LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRS 292
L ++ LRA GI IH + K+G++ + SLID+Y K G ++
Sbjct: 323 LSALASLRALSAGI------NIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDL 376
Query: 293 MLKTDIISCTALISGFA------------------------------RDDNHSKEAFDLF 322
+L+ +++ +++ G++ ++ ++ ++F
Sbjct: 377 ILEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVF 436
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
+++ + +L CA++ASL+ G +H K YD VG AL DMYAK
Sbjct: 437 NTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKC 496
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV-PNDVTFLSL 441
G+I + + F+ M +KN ISWT +I G A+ G+ E++ L+++M+ V PN++ LS+
Sbjct: 497 GDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSV 556
Query: 442 LFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
LFACSH GL +G F M Y I P+ +H++CVVDL +R G+L A IR + +P
Sbjct: 557 LFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQP 616
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRK 561
A+ W+A+L C Y + + E A+ L+ + S YV+LSNIY +AG W + RK
Sbjct: 617 EANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRK 676
Query: 562 LMEERSLRKNPGYSFLQ 578
LM E+ L+K+ G S+++
Sbjct: 677 LMREKGLKKSGGCSWVE 693
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 15/185 (8%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
ST+ S+L C + + +H II G + ++ + T + YAK GD+ S+++ F+R
Sbjct: 449 STFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFER 508
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLR-SGVRANQFTYSSALRACARMRWLQG 149
MPE+N +SWT MI G A++G+ +L++F M R S V N+ S L AC+ +
Sbjct: 509 MPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDK 568
Query: 150 G-------RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWN 201
G + G KG+ + ++DL ++ G + +A I + + +W
Sbjct: 569 GLWYFNSMEKVYGIKPKGKHY------TCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWA 622
Query: 202 AMIGG 206
A++ G
Sbjct: 623 ALLSG 627
>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
Length = 781
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 166/551 (30%), Positives = 295/551 (53%), Gaps = 2/551 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ +++ C + H +I G E +++ ++ FYAK+G V A + F
Sbjct: 106 DRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVF 165
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS-GVRANQFTYSSALRACARMRWL 147
D MP R++V+W M+ GY NG AL F M + V+ + +AL AC
Sbjct: 166 DGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSS 225
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ I G + + +++ V ++LLD+Y KCG + A +F + + VV+WN MIGG
Sbjct: 226 MQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGY 285
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A+ D++F F M +G++ + T ++L A + +H +++
Sbjct: 286 ALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHV 345
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
L +L+++Y K G + S+ +++ + ++S +I+ + + ++ EA LF +++
Sbjct: 346 VLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYT-EAITLFLELLN 404
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ + D + ++ + SL RQIH++ + + + NA++ MYA+SG++
Sbjct: 405 QPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVA 464
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
+ FD+M K+VISW ++I GYA HG G A+E++ +MK+ G+ PN+ TF+S+L ACS
Sbjct: 465 SREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSV 524
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
+GL EGW F M+ +Y ++P+ EH+ C+ DL R G L I M I PT+ +W
Sbjct: 525 SGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWG 584
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
++L A + + E AA +F +E + + Y+VLS++Y AG W++ + R LM+E+
Sbjct: 585 SLLTASRNQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKG 644
Query: 568 LRKNPGYSFLQ 578
LR+ S ++
Sbjct: 645 LRRTEPISLVE 655
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/489 (24%), Positives = 227/489 (46%), Gaps = 45/489 (9%)
Query: 68 STKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV 127
S +++ A G + A +A + + MI G+A G AL + ML G
Sbjct: 44 SKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGA 103
Query: 128 RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWI 187
R ++FT+ ++ CAR+ L GR G + K +++ ++L+ YAK G +EDA
Sbjct: 104 RPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAER 163
Query: 188 LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ-GMKPDCFTLGSILRASVGGI 246
+F+ + +D+V+WN M+ G G + F+ M ++ D + + L A +
Sbjct: 164 VFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEV 223
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
M+ +IH +I+ GLE K+ SL+D+Y K G + A ++ +M +++ +I
Sbjct: 224 SSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIG 283
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
G+A ++ EAFD F M + + ++ V +L CA S GR +H + + Q
Sbjct: 284 GYALNER-PDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFL 342
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
+ AL++MY K G++ + + F ++ +K ++SW ++IA Y EAI L+ ++
Sbjct: 343 PHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLEL 402
Query: 427 KHEGMVPNDVTFLSLLFA---------C--------------------------SHTGLT 451
++ + P+ T +++ A C + +G
Sbjct: 403 LNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDV 462
Query: 452 CEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMN---IKPTASLWSA 508
E+F M++K I ++ ++ +A GQ ++A M +M ++P S + +
Sbjct: 463 VASREIFDKMVSKDVI-----SWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVS 517
Query: 509 ILGACSIYG 517
+L ACS+ G
Sbjct: 518 VLTACSVSG 526
>gi|296087629|emb|CBI34885.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 200/677 (29%), Positives = 326/677 (48%), Gaps = 136/677 (20%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFY---------------- 75
T +SLL+ ++ Q +++HAH+I G+ S +++ K++I Y
Sbjct: 23 TCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEF 82
Query: 76 ---------------AKVGDVLSARKAFDRMPERN------------------------- 95
+ G+++ AR FD MPERN
Sbjct: 83 DGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFE 142
Query: 96 ------VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG 149
VVSWTA ISG+ +NG + AL +F +L SGVR N T++S +RAC +
Sbjct: 143 RNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGL 202
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSW--------- 200
G I G + K F L V ++L+ L + G I+ A +F+R+E++DVVSW
Sbjct: 203 GMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVE 262
Query: 201 ----------------------NAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD--CF--T 234
+AMI + G+ +++ LF M+++G KP+ CF T
Sbjct: 263 TGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACT 322
Query: 235 LGSI--LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRS 292
L ++ LRA GI IH + K+G++ + SLID+Y K G ++
Sbjct: 323 LSALASLRALSAGI------NIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDL 376
Query: 293 MLKTDIISCTALISGFA------------------------------RDDNHSKEAFDLF 322
+L+ +++ +++ G++ ++ ++ ++F
Sbjct: 377 ILEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVF 436
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
+++ + +L CA++ASL+ G +H K YD VG AL DMYAK
Sbjct: 437 NTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKC 496
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV-PNDVTFLSL 441
G+I + + F+ M +KN ISWT +I G A+ G+ E++ L+++M+ V PN++ LS+
Sbjct: 497 GDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSV 556
Query: 442 LFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
LFACSH GL +G F M Y I P+ +H++CVVDL +R G+L A IR + +P
Sbjct: 557 LFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQP 616
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRK 561
A+ W+A+L C Y + + E A+ L+ + S YV+LSNIY +AG W + RK
Sbjct: 617 EANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRK 676
Query: 562 LMEERSLRKNPGYSFLQ 578
LM E+ L+K+ G S+++
Sbjct: 677 LMREKGLKKSGGCSWVE 693
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 223/475 (46%), Gaps = 86/475 (18%)
Query: 15 QALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVI 72
+ALK ++ + P+ T+ S+++ C + I ++ G+E L +S +I
Sbjct: 167 EALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLI 226
Query: 73 IFYAKVGDVLSARKAFDRMPERNVVSWT-------------------------------A 101
++G++ AR+ FDRM +R+VVSWT A
Sbjct: 227 TLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPERNEISWSA 286
Query: 102 MISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGR 161
MI+ Y+Q+GY E AL +FS M++ G + N ++ L A A +R L G I G + K
Sbjct: 287 MIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHVTKIG 346
Query: 162 FVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF--------- 212
+++F+ S+L+DLY KCG +D ++F+ I K+VV WN+M+GG ++ G
Sbjct: 347 IDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEETEELFE 406
Query: 213 ----NDDSFW------------------LFRSMMRQGMKPDCFTLGSILRASVGGIELMK 250
+D W +F +++ G P+ T S+L A L K
Sbjct: 407 LIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDK 466
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR 310
+H IIKLG++ + +L D+YAK G I S+ Q++ M + + IS T +I G A
Sbjct: 467 GMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLA- 525
Query: 311 DDNHSKEAFDLFKDMI-LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDA 369
+ + E+ LF++M ++ ++++L +L C++ ++ G Y +S +
Sbjct: 526 ESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKG-------LWYFNSMEK 578
Query: 370 AVG--------NALIDMYAKSGEIADAN---RAFDEMGDKNVISWTSLIAGYAKH 413
G ++D+ ++SG + +A R + N +W +L++G K+
Sbjct: 579 VYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEAN--AWAALLSGCKKY 631
>gi|449436034|ref|XP_004135799.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 169/523 (32%), Positives = 283/523 (54%), Gaps = 2/523 (0%)
Query: 57 ITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENAL 116
+ G L + ++ F K GD++ A+ F +M E++VV W MI G+ Q G
Sbjct: 182 VCKGLAGGRFLGSSILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGY 241
Query: 117 LVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLY 176
+F ML + + + T S +++C MR L G+ + G + + V + L+D+Y
Sbjct: 242 NLFLDMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMY 301
Query: 177 AKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLG 236
K G +E A +FE + +++VSWN MI G G ++ LF+ ++ + D T+
Sbjct: 302 CKSGDVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVV 361
Query: 237 SILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT 296
S+++ +L +H I + GL+ + L +++D+YAK GS+ A ++ M
Sbjct: 362 SLIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNK 421
Query: 297 DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI 356
++IS TA++ G A++ H+++A LF M +++ + + L ++ C + L GR +
Sbjct: 422 NVISWTAMLVGLAQN-GHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSV 480
Query: 357 HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFD-EMGDKNVISWTSLIAGYAKHGY 415
HA ++ + + V ALIDMYAK +I A F + K+VI + S+I+GY HG
Sbjct: 481 HATLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGL 540
Query: 416 GHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFS 475
GH+A+ +Y +M EG+ PN+ TF+SLL ACSH+GL EG LF +M+ + P + ++
Sbjct: 541 GHKALCVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYA 600
Query: 476 CVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPE 535
C+VDL +R G+L A +I QM PT+ + +L C ++ + LG A L +E
Sbjct: 601 CIVDLLSRAGRLRQAEELINQMPFTPTSGILETLLNGCLLHKDIELGVKLADRLLSLESR 660
Query: 536 KSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
Y+ LSNIY A WD+ + R LM E+ ++K PGYS ++
Sbjct: 661 NPSIYITLSNIYAKASRWDSVKYVRGLMMEQEIKKIPGYSSIE 703
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 133/489 (27%), Positives = 261/489 (53%), Gaps = 15/489 (3%)
Query: 40 CIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSW 99
C+D+ + +I ITN + L K++ Y+ +G + +ARK FD +P+ V
Sbjct: 68 CLDELSPSNREII----ITNPIYGDQFLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLC 123
Query: 100 TAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA-RMRWLQGGRMIQGSIQ 158
AM++GY QN + + + M R + + +T + AL+AC + + G +I ++
Sbjct: 124 NAMVNGYLQNERYNDCIELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVC 183
Query: 159 KGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFW 218
KG F+ S++L+ K G I A F ++ KDVV WN MIGG +G + +
Sbjct: 184 KG-LAGGRFLGSSILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYN 242
Query: 219 LFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKLTGSLIDVY 277
LF M+ ++P T+ S+++ S G + + + +H ++ G+ ++ +LID+Y
Sbjct: 243 LFLDMLYNKIEPSAVTMISLIQ-SCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMY 301
Query: 278 AKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVIL 337
K G + SA ++ +M +++S +ISG+ + + E LF+ +I+ +G D +
Sbjct: 302 CKSGDVESARWIFENMPSRNLVSWNVMISGYVQ-NGLLVETLRLFQKLIMDDVGFDSGTV 360
Query: 338 CLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD 397
++ +C+ A L+ G+ +H F ++ + + A++D+YAK G +A A+ F+ M +
Sbjct: 361 VSLIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKN 420
Query: 398 KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWEL 457
KNVISWT+++ G A++G+ +A++L+ +M++E + N +T +SL++ C+ GL EG +
Sbjct: 421 KNVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSV 480
Query: 458 FTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT-ASLWSAILGACSIY 516
+ ++ + ++D++A+ ++ SA M+ + + P L+++++ Y
Sbjct: 481 HATL-TRFHFASEVVVMTALIDMYAKCSKINSA-EMVFKYGLTPKDVILYNSMISG---Y 535
Query: 517 GNTSLGELA 525
G LG A
Sbjct: 536 GMHGLGHKA 544
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 188/372 (50%), Gaps = 5/372 (1%)
Query: 28 LDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
++PS T +SL+Q C + + +H ++ G + + T +I Y K GDV SAR
Sbjct: 252 IEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESAR 311
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
F+ MP RN+VSW MISGY QNG L +F ++ V + T S ++ C+R
Sbjct: 312 WIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTA 371
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
L GG+++ G I + NL + +A++DLYAKCG + A +FER++ K+V+SW AM+
Sbjct: 372 DLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLV 431
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
GLA G D+ LF M + + + TL S++ L + +H + + S
Sbjct: 432 GLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFAS 491
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYR-SMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ +LID+YAK I SA +++ + D+I ++ISG+ K A ++
Sbjct: 492 EVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHK-ALCVYHR 550
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK-YQSSYDAAVGNALIDMYAKSG 383
M + + ++ +L+ C++ + G + K + ++ + ++D+ +++G
Sbjct: 551 MNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAG 610
Query: 384 EIADANRAFDEM 395
+ A ++M
Sbjct: 611 RLRQAEELINQM 622
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 186/385 (48%), Gaps = 21/385 (5%)
Query: 167 FVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ 226
F+ + L+ Y+ G +E+A +F+ I + V NAM+ G +D L + M R
Sbjct: 90 FLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDCIELLKMMSRC 149
Query: 227 GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSA 286
++ D +T L+A + ++ ++ L + GL L S+++ K G I A
Sbjct: 150 HLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILNFLVKTGDIMCA 209
Query: 287 YQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICAN 346
+ M++ D++ +I GF + + +E ++LF DM+ K+ V + ++ C
Sbjct: 210 QFFFHQMVEKDVVCWNVMIGGFMQ-EGLFREGYNLFLDMLYNKIEPSAVTMISLIQSCGE 268
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
+ +L G+ +H F + S D V LIDMY KSG++ A F+ M +N++SW +
Sbjct: 269 MRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPSRNLVSWNVM 328
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYR 466
I+GY ++G E + L++K+ + + + T +SL+ CS T +G ++ I YR
Sbjct: 329 ISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTA-DLDGGKILHGFI--YR 385
Query: 467 -------ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNT 519
+LP A +VDL+A+ G L A ++ +M K S W+A+L + G+
Sbjct: 386 RGLDLNLVLPTA-----IVDLYAKCGSLAYASSVFERMKNKNVIS-WTAMLVGLAQNGHA 439
Query: 520 SLGELAARNLFDMEPEKSVNYVVLS 544
A LFD + V + L+
Sbjct: 440 R----DALKLFDQMQNERVTFNALT 460
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 155/433 (35%), Positives = 254/433 (58%), Gaps = 2/433 (0%)
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
R + + +++L + + LL YA+ I+DA+ LF+ + +D +W+ M+GG A
Sbjct: 20 RQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKA 79
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
G + + FR ++R G+ PD +TL ++R +L IHD+++K GL S + +
Sbjct: 80 GDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVC 139
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
SL+D+YAK + A +L+ ML D+++ T +I +A D ++ E+ LF M + +
Sbjct: 140 ASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYA--DCNAYESLVLFDRMREEGV 197
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
D V + ++N CA + +++ R + + + S D +G A+IDMYAK G + A
Sbjct: 198 VPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESARE 257
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
FD M +KNVISW+++IA Y HG G +AI+L+ M ++PN VTF+SLL+ACSH GL
Sbjct: 258 VFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGL 317
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
EG F M ++ + P +H++C+VDL R G+L+ A +I M ++ LWSA+L
Sbjct: 318 IEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALL 377
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
GAC I+ L E AA +L +++P+ +YV+LSNIY AG W+ K R +M +R L+K
Sbjct: 378 GACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKK 437
Query: 571 NPGYSFLQSSKKN 583
PG+++++ K
Sbjct: 438 IPGWTWIEVDNKT 450
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 186/364 (51%), Gaps = 4/364 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HAH++ NG +L ++ K++ YA+ + A FD + R+ +W+ M+ G+A+ G
Sbjct: 22 VHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAGD 81
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
F +LR GV + +T +R C LQ GR+I + K + + FV ++
Sbjct: 82 HAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCAS 141
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+D+YAKC +EDA LFER+ KD+V+W MIG A +S LF M +G+ PD
Sbjct: 142 LVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYA-DCNAYESLVLFDRMREEGVVPD 200
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
+ +++ A + + +D I++ G L ++ID+YAK GS+ SA +++
Sbjct: 201 KVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFD 260
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
M + ++IS +A+I+ + K+A DLF M+ + + V +L C++ +
Sbjct: 261 RMKEKNVISWSAMIAAYGY-HGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIE 319
Query: 352 LG-RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAG 409
G R ++ ++ D ++D+ ++G + +A R + M +K+ W++L+
Sbjct: 320 EGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGA 379
Query: 410 YAKH 413
H
Sbjct: 380 CRIH 383
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 144/285 (50%), Gaps = 8/285 (2%)
Query: 248 LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG 307
+ I Q+H ++ G + L+ YA++ +I AY L+ + D + + ++ G
Sbjct: 16 VFHIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGG 75
Query: 308 FARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSY 367
FA+ +H+ + F++++ + D+ L ++ C + L +GR IH K+
Sbjct: 76 FAKAGDHAG-CYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLS 134
Query: 368 DAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMK 427
D V +L+DMYAK + DA R F+ M K++++WT +I YA +E++ L+ +M+
Sbjct: 135 DHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCN-AYESLVLFDRMR 193
Query: 428 HEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQL 487
EG+VP+ V ++++ AC+ G D I + + ++D++A+ G +
Sbjct: 194 EEGVVPDKVAMVTVVNACAKLGAMHRA-RFANDYIVRNGFSLDVILGTAMIDMYAKCGSV 252
Query: 488 ESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDM 532
ESA + +M K S WSA++ A YG G+ A +LF M
Sbjct: 253 ESAREVFDRMKEKNVIS-WSAMIAA---YGYHGRGK-DAIDLFHM 292
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 137/267 (51%), Gaps = 4/267 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T +++ C D+ + +IH ++ +G S+ + ++ YAK V A++ F
Sbjct: 100 DNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLF 159
Query: 89 DRMPERNVVSWTAMISGYAQ-NGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
+RM +++V+WT MI YA N Y+ +L++F M GV ++ + + ACA++ +
Sbjct: 160 ERMLSKDLVTWTVMIGAYADCNAYE--SLVLFDRMREEGVVPDKVAMVTVVNACAKLGAM 217
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
R I + F ++ + +A++D+YAKCG +E A +F+R++ K+V+SW+AMI
Sbjct: 218 HRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAY 277
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESS 266
G D+ LF M+ + P+ T S+L A S G+ + + + + +
Sbjct: 278 GYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPD 337
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSM 293
K ++D+ + G + A +L +M
Sbjct: 338 VKHYTCMVDLLGRAGRLDEALRLIEAM 364
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 123/239 (51%), Gaps = 5/239 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D ++++ C A +A + +I+ NG+ ++ L T +I YAK G V SAR+ F
Sbjct: 200 DKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVF 259
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
DRM E+NV+SW+AMI+ Y +G ++A+ +F ML + N+ T+ S L AC+ ++
Sbjct: 260 DRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIE 319
Query: 149 GG-RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGG 206
G R ++ ++ + ++DL + G +++A L E + KD W+A++G
Sbjct: 320 EGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGA 379
Query: 207 LAMQGFNDDSFWLFRSMMR-QGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
+ + + S++ Q P + L S + A G E K+++ D++ + L+
Sbjct: 380 CRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWE--KVAKFRDMMTQRKLK 436
>gi|242094598|ref|XP_002437789.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
gi|241916012|gb|EER89156.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
Length = 623
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 190/549 (34%), Positives = 294/549 (53%), Gaps = 48/549 (8%)
Query: 66 HLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
H ++I A G V ARK FD P+ +VVSWTA++S YA+ G +A +F R
Sbjct: 43 HDPNRLIAELAAAGRVWDARKLFDGTPDWDVVSWTALVSAYARRGMLRDARELFD---RP 99
Query: 126 GVRANQFTYSSALRACARMRWL-QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIED 184
R N T+++ L AR R + + + Q Q+ N+ + +L+ YA G + D
Sbjct: 100 DARRNVVTWTALLSGYARARLVDEAEALFQRMPQR-----NVVSWNTMLEAYAAAGRVGD 154
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG 244
A LF+R+ +D SWN ++ L G D + LF M + + + + R+ G
Sbjct: 155 ACALFDRMPVRDAGSWNILLATLVRSGSVDKARELFGRMPERDVMAWTTMVDGVARS--G 212
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
++ ++ + D + + + S N ++I Y + I A L+ M + DI SC +
Sbjct: 213 KVDEARV--LFDSMPERNVVSWN----AMISGYTRNHRIDEALDLFMKMPERDIASCNIM 266
Query: 305 ISGFA--RDDNHSKEAFD----------------------------LFKDMILKKMGIDD 334
++GF +D ++E FD LF M++ +
Sbjct: 267 VTGFIQNKDLKRARELFDEMPERNVVTWTTMMNGYLKGKQSELALGLFSGMLMAGTRPNQ 326
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE 394
V L+ C+++A+L G+Q+H K +DA V +AL+++YAK GEI A + FD
Sbjct: 327 VTFLGALDACSDLAALCEGKQVHQMICKTTFQFDAFVESALMNVYAKCGEIGLARKLFDL 386
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG 454
+K++ISW +IA YA HG G EAI LY+KM+ G PNDVT++ LL ACSH+GL EG
Sbjct: 387 SREKDLISWNGIIAAYAHHGVGIEAILLYEKMQENGYRPNDVTYVVLLSACSHSGLVDEG 446
Query: 455 WELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP-TASLWSAILGAC 513
++F M+N I R EH++C++DL +R G+L+ A +I + IKP + S+WSA+LG C
Sbjct: 447 LKIFESMVNDRSIAVRDEHYTCLIDLCSRAGRLDDAKRLIHYLKIKPASGSVWSALLGGC 506
Query: 514 SIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPG 573
+ +GN S+G LAARNL EP+ + Y +LSNIY +AG W A + R M R L+K PG
Sbjct: 507 NAHGNESIGNLAARNLLQAEPDNAGTYTLLSNIYASAGKWKEAAEIRSEMNNRGLKKQPG 566
Query: 574 YSFLQSSKK 582
S+++ + K
Sbjct: 567 CSWIEVANK 575
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 110/222 (49%), Gaps = 14/222 (6%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T++ L C D A + +H I ++ + + + ++ YAK G++ ARK FD
Sbjct: 328 TFLGALDACSDLAALCEGKQVHQMICKTTFQFDAFVESALMNVYAKCGEIGLARKLFDLS 387
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
E++++SW +I+ YA +G A+L++ M +G R N TY L AC+ + G
Sbjct: 388 REKDLISWNGIIAAYAHHGVGIEAILLYEKMQENGYRPNDVTYVVLLSACSHSGLVDEGL 447
Query: 152 MIQGSIQKGRFVENLFVK----SALLDLYAKCGWIEDA--WILFERIERKDVVSWNAMIG 205
I S+ R ++ V+ + L+DL ++ G ++DA I + +I+ W+A++G
Sbjct: 448 KIFESMVNDR---SIAVRDEHYTCLIDLCSRAGRLDDAKRLIHYLKIKPASGSVWSALLG 504
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPD---CFTLGSILRASVG 244
G G R++++ +PD +TL S + AS G
Sbjct: 505 GCNAHGNESIGNLAARNLLQA--EPDNAGTYTLLSNIYASAG 544
>gi|125597302|gb|EAZ37082.1| hypothetical protein OsJ_21424 [Oryza sativa Japonica Group]
Length = 671
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 179/553 (32%), Positives = 301/553 (54%), Gaps = 9/553 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T +L+ C K +HA + G + + ++ ++ YAK G V S+ +AF
Sbjct: 107 TVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRAFVLT 166
Query: 92 PERNVVSWTAMIS---GYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
P+R+V+SWT+MI+ + +GY + A+++F ML V T+S L+ L
Sbjct: 167 PQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSCILKVFDVPELLP 226
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ + G + K + + +ALL +Y +CG +++ L RI R D S +++ A
Sbjct: 227 SGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMDEITRLACRI-RHDAFSRTSLLTAYA 285
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G N ++ +FR M+ M D + S+L+ +L + +IH +K
Sbjct: 286 RNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTL 345
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
L +++ VY K G I S+ ++ ++ D IS TAL++ + ++D S+EA F++M+ K
Sbjct: 346 LLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTALLTCYVQND-LSQEALFFFREMVRK 404
Query: 329 KMGIDDVILCL--MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
G++ I C+ +L C+ +SL+ G QIH+ K D +V NAL+ MYAK G +
Sbjct: 405 --GLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQ 462
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A + F+ M ++ +ISW +LI +++HG AI+L+ M+ E + P+D TF+ LL +CS
Sbjct: 463 VALKIFNSMRNRGIISWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCS 522
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
GL EG E F M KY + P+ EH++C+VDLFAR G+ A I M +P +W
Sbjct: 523 RMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQLVW 582
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
A+L +C ++GN LG +AA+ + +++PE Y++LS+I+ + WD + R L++ +
Sbjct: 583 EALLASCRVHGNLDLGRMAAKKILEIKPEDPSPYIILSSIHASIDMWDEKARNRTLLDFQ 642
Query: 567 SLRKNPGYSFLQS 579
LRK+ G S L S
Sbjct: 643 QLRKDVGSSQLDS 655
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 146/505 (28%), Positives = 261/505 (51%), Gaps = 17/505 (3%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H + G ++ +L +++ Y G + AR FD MP RNVVSW+ +I+ ++ G
Sbjct: 24 VHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRLGV 83
Query: 112 DENALLVFSAMLRSGV--RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK 169
+AL +F+ MLR G R N FT ++ + CAR + G + S K E+ V
Sbjct: 84 LGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVA 143
Query: 170 SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ---GFNDDSFWLFRSMMRQ 226
L+D+YAKCG + +W F ++ V+SW +MI L G+ D + LF+ M+
Sbjct: 144 GTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLVL 203
Query: 227 GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSA 286
+ P T IL+ L Q+H ++K+G E L +L+ +Y + G +
Sbjct: 204 KVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMDEI 263
Query: 287 YQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICAN 346
+L ++ D S T+L++ +AR + + EA +F+DM++ M ID + +L +C++
Sbjct: 264 TRLA-CRIRHDAFSRTSLLTAYAR-NGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSS 321
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
+ L + ++IH +A K D + NA++ +Y K G+IA + F+ + +K+ ISWT+L
Sbjct: 322 LGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTAL 381
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYR 466
+ Y ++ EA+ +++M +G+ + S+L ACS T GW++ + ++ K
Sbjct: 382 LTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVV-KLG 440
Query: 467 ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAA 526
+ + +V ++A+ G ++ A + M + S W+A++ + S +GN E+AA
Sbjct: 441 VDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIIS-WNALITSFSQHGN----EVAA 495
Query: 527 RNLFDMEPEKSVNYVVLSNIYTAAG 551
LFDM E+ +V + YT G
Sbjct: 496 IQLFDMMQEE----MVCPDDYTFVG 516
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 130/267 (48%), Gaps = 1/267 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D S SLLQ C R IH + + N + + L ++ Y K GD+ S+
Sbjct: 307 IDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIV 366
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F+ + ++ +SWTA+++ Y QN + AL F M+R G+ ++ F +S LRAC+ L
Sbjct: 367 FNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSL 426
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G I + K ++ V++AL+ +YAKCG ++ A +F + + ++SWNA+I
Sbjct: 427 SCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIISWNALITSF 486
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESS 266
+ G + LF M + + PD +T +L + S G+ + K LE
Sbjct: 487 SQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEPK 546
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ ++D++A+ G A + +M
Sbjct: 547 MEHYTCMVDLFARAGRFSDAMKFIDAM 573
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 176/364 (48%), Gaps = 7/364 (1%)
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
R + G+ K + + ++ + LL Y G + DA +F+ + R++VVSW+ +I +
Sbjct: 22 RAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRL 81
Query: 211 GFNDDSFWLFRSMMRQGM--KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G D+ LF M+R G +P+ FT+ +++ + + Q+H +KLG++
Sbjct: 82 GVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDES 141
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR--DDNHSKEAFDLFKDMI 326
+ G+L+D+YAK G + S+++ + + ++S T++I+ D + A LFK M+
Sbjct: 142 VAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKML 201
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ K+ + +L + L G+Q+H K + D A+G AL+ MY + G +
Sbjct: 202 VLKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMD 261
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
+ R + + S TSL+ YA++G EA+ +++ M M + SLL CS
Sbjct: 262 EITRLACRI-RHDAFSRTSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCS 320
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
G E+ + + L + +V ++ + G + S+ + + K T S W
Sbjct: 321 SLGQLRVVKEIHCYALKNFFRLDTLL-LNAIVTVYGKCGDIASSEIVFNTLENKDTIS-W 378
Query: 507 SAIL 510
+A+L
Sbjct: 379 TALL 382
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 8/176 (4%)
Query: 354 RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKH 413
R +H A K + N L+ Y G +ADA FDEM +NV+SW+ LIA ++
Sbjct: 22 RAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRL 81
Query: 414 GYGHEAIELYKKMKHEGM--VPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
G +A+ L+ M G PN T +L+ C+ G ++ + K +
Sbjct: 82 GVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAV-KLGVDEDE 140
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL--WSAILGACSIYGNTSLGELA 525
+VD++A+ G++ S++ R + P S+ W++++ +G++ + A
Sbjct: 141 SVAGTLVDMYAKCGRVGSSW---RAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTA 193
>gi|449519412|ref|XP_004166729.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial-like [Cucumis sativus]
Length = 781
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 186/578 (32%), Positives = 305/578 (52%), Gaps = 8/578 (1%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGY 61
N + + F+ + + ++ D TY + L FC+D + +H + G+
Sbjct: 143 NTILSGFEKSENALSFALRMNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGF 202
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDE-NALLVFS 120
+ ++ + ++ Y++ ++ ARK FD MP R+ VSW+AMI+GYAQ G + A+LVF
Sbjct: 203 KGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFV 262
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M+R GV+ + + AL C R L+ G+ I K + V + L+ Y+KC
Sbjct: 263 QMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCE 322
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
IEDA +FE I ++V+SW MI + + + LF M G+ P+ T +L
Sbjct: 323 IIEDAKAVFELINDRNVISWTTMI-----SLYEEGAVSLFNKMRLDGVYPNDVTFIGLLH 377
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
A + + +H L IK S + SLI +YAK+ ++ A +++ + +IIS
Sbjct: 378 AITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIIS 437
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV-ASLNLGRQIHAF 359
ALISG+A++ +EA + F I++ + ++ I A SL G++ H+
Sbjct: 438 WNALISGYAQN-ALCQEALEAFLYAIMEYKPNEYTFGSVLNAISAGEDISLKHGQRCHSH 496
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
K + D + AL+DMYAK G I ++ R F+E ++ +WT+LI+GYA+HG
Sbjct: 497 LIKVGLNVDPIISGALLDMYAKRGSIQESQRVFNETSKQSQFAWTALISGYAQHGDYESV 556
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD 479
I+L+++M+ E + P+ V FLS+L ACS + G + F MI + I P EH+SC+VD
Sbjct: 557 IKLFEEMEKERIKPDAVIFLSVLTACSRNRMVDMGRQFFNMMIKDHMIEPEGEHYSCMVD 616
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVN 539
+ R G+LE A ++ ++ P S ++LGAC +GN + E A +L EP +S
Sbjct: 617 MLGRAGRLEEAEEILARIPGGPGVSALQSLLGACRTHGNVEMAERIANDLMKKEPLESGP 676
Query: 540 YVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
YV++SN+Y G W+ K RK M ER + K G+S++
Sbjct: 677 YVLMSNLYAQKGDWEKVAKVRKEMRERGVMKEIGFSWV 714
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 204/387 (52%), Gaps = 17/387 (4%)
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV--RANQFTYSSALRACARMR 145
FD+ P N S+ ++ Y +L F R G+ A++FT AL+AC
Sbjct: 30 FDQSPPPNAASFNRVLLNYLPRDGAFQSLRFFKNNFRWGLDGNADEFTLVLALKACCGFP 89
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
L GR I G + FV ++ V ++L+++Y K G +E A+ +F+ + D+VSWN ++
Sbjct: 90 KL--GRQIHGFVISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQNLHDPDIVSWNTILS 147
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
G + N SF L M G+K D T + L + G E + Q+H L +K G +
Sbjct: 148 GFE-KSENALSFAL--RMNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKG 204
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ +L+ +Y+++ + A +++ M D +S +A+I+G+A++ ++ +A +F M
Sbjct: 205 DVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFVQM 264
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ + + D+V + L++C + +L LG+QIH A K +VGN LI Y+K I
Sbjct: 265 VREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEII 324
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
DA F+ + D+NVISWT++I+ Y + A+ L+ KM+ +G+ PNDVTF+ LL A
Sbjct: 325 EDAKAVFELINDRNVISWTTMISLYEEG-----AVSLFNKMRLDGVYPNDVTFIGLLHAI 379
Query: 446 S-----HTGLTCEGWELFTDMINKYRI 467
+ GL G + D +++ +
Sbjct: 380 TIRNMVEQGLMVHGLCIKADFVSELTV 406
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 175/628 (27%), Positives = 289/628 (46%), Gaps = 89/628 (14%)
Query: 1 MNIVRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
+ + NF+ G A +F+L ++L C K RQ IH +I++G
Sbjct: 58 LRFFKNNFRWGLDGNADEFTL-----------VLALKACCGFPKLGRQ---IHGFVISSG 103
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+ S++ +S ++ Y K G + A F + + ++VSW ++SG+ ++ ENAL
Sbjct: 104 FVSHITVSNSLMNMYCKSGQLERAFSVFQNLHDPDIVSWNTILSGFEKS---ENALSFAL 160
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M +GV+ + TY++AL C G + K F ++FV +AL+ +Y++
Sbjct: 161 RMNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWE 220
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFND-DSFWLFRSMMRQGMKPDCFTLGSIL 239
+ DA +F+ + +D VSW+AMI G A +G N + +F M+R+G+K D + L
Sbjct: 221 HLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFVQMVREGVKFDNVPITGAL 280
Query: 240 RASVGG----IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLK 295
SV G +EL K QIH L +K G E+ + LI Y+K I A ++ +
Sbjct: 281 --SVCGHERNLELGK--QIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELIND 336
Query: 296 TDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQ 355
++IS T +IS + + A LF M L + +DV +L+ + G
Sbjct: 337 RNVISWTTMISLY------EEGAVSLFNKMRLDGVYPNDVTFIGLLHAITIRNMVEQGLM 390
Query: 356 IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGY 415
+H K + VGN+LI MYAK + DA+R F E+ + +ISW +LI+GYA++
Sbjct: 391 VHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNAL 450
Query: 416 GHEAIE--LYKKMKHEGMVPNDVTFLSLLFACS-------------HTGLTCEGWEL--- 457
EA+E LY M+++ PN+ TF S+L A S H+ L G +
Sbjct: 451 CQEALEAFLYAIMEYK---PNEYTFGSVLNAISAGEDISLKHGQRCHSHLIKVGLNVDPI 507
Query: 458 ----FTDMINKYRILPRAEH------------FSCVVDLFARRGQLESAYNMIRQMN--- 498
DM K + ++ ++ ++ +A+ G ES + +M
Sbjct: 508 ISGALLDMYAKRGSIQESQRVFNETSKQSQFAWTALISGYAQHGDYESVIKLFEEMEKER 567
Query: 499 IKPTASLWSAILGACSIYGNTSLGELAARNLFDM-------EPEKSVNYVVLSNIYTAAG 551
IKP A ++ ++L ACS +G R F+M EPE +Y + ++ AG
Sbjct: 568 IKPDAVIFLSVLTACSRNRMVDMG----RQFFNMMIKDHMIEPEGE-HYSCMVDMLGRAG 622
Query: 552 AWDNARKTRKLMEERSLRKNPGYSFLQS 579
+ A + + PG S LQS
Sbjct: 623 RLEEAEEILA-----RIPGGPGVSALQS 645
>gi|357168001|ref|XP_003581434.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Brachypodium distachyon]
Length = 757
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 167/529 (31%), Positives = 286/529 (54%), Gaps = 3/529 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HA + + S+L + ++ Y+K G V F RM E++ +SW ++I+G+AQ G
Sbjct: 164 VHAQAMKSENGSDLIVQNALVTMYSKSGLVADGFLLFGRMREKDPISWGSIIAGFAQQGC 223
Query: 112 DENALLVFSAMLRSGVR-ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
+ AL +F M+ G+ N+F + S AC + L+ G I K R N +
Sbjct: 224 EMEALQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLEYGEQIHSLSVKYRLDHNSYAGC 283
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
+L D+YA+C +E A +F I+ D+VSWN++I +++G ++ L M G++P
Sbjct: 284 SLSDMYARCKKLESAKRVFYGIDAPDLVSWNSIINACSVEGLLSEAMVLLSEMRGSGLRP 343
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
D T+ +L A VG + +H ++KLGL+ + SL+ +YA+ SA ++
Sbjct: 344 DGITVRGLLCACVGCDAIQHGRLMHSYLVKLGLDGDVSVCNSLLSMYARCMDFSSAMDVF 403
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
D+++ ++++ + H + F LF + +D + L +L+ A +
Sbjct: 404 HETRDRDVVTWNSILTACVQH-QHLEVVFKLFNLLQRSLPSLDRISLNNVLSASAELGYF 462
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAG 409
+ +Q+H FK D + N LID YAK G + DA + F+ MG + +V SW+SLI G
Sbjct: 463 EMVKQVHTCTFKVGLVNDTMLSNGLIDTYAKCGSLDDAVKLFEMMGTNSDVFSWSSLIVG 522
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
YA+ GY +A++L+ +M++ G+ PN VTF+ +L ACS GL EG ++ M ++ +LP
Sbjct: 523 YAQSGYPRKALDLFARMRNLGVRPNHVTFVGVLTACSRVGLVDEGCYYYSIMEPEHGVLP 582
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
EH SCV+DL AR G+L A + QM +P +W +L + + +G AA +
Sbjct: 583 TREHCSCVIDLLARAGRLTEAAKFVDQMPFEPDIVMWKTLLAGSKTHNDVEMGRRAAEGI 642
Query: 530 FDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+++P S YV+L NIY+A+G W+ + +K M ++K+PG S+++
Sbjct: 643 LNIDPSHSAAYVLLCNIYSASGDWNEFARLKKAMRSSGVKKSPGKSWVK 691
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 155/557 (27%), Positives = 276/557 (49%), Gaps = 26/557 (4%)
Query: 8 FKTGQLKQALKFSLSCPDTL----LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYES 63
+ +G+L AL S P + L +TY +LL C +A L+H H++ + +
Sbjct: 12 YHSGRLSAALHAFQSIPSSPAPAPLSAATYAALLATCSRLRALCLGCLVHRHLLASPDPN 71
Query: 64 ---NLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
N L+ +I Y + SAR FD MP +N VSW ++I+ +AQN +AL +FS
Sbjct: 72 LVRNTVLNNHLITMYGRCAAPESARLVFDEMPAKNPVSWASVIAAHAQNRRSTDALGLFS 131
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
+MLRSG +QF S +RACA + + GR + K +L V++AL+ +Y+K G
Sbjct: 132 SMLRSGTAPDQFALGSTVRACAELGDIGVGRQVHAQAMKSENGSDLIVQNALVTMYSKSG 191
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGM-KPDCFTLGSIL 239
+ D ++LF R+ KD +SW ++I G A QG ++ +FR M+ +GM P+ F GS+
Sbjct: 192 LVADGFLLFGRMREKDPISWGSIIAGFAQQGCEMEALQIFREMVAEGMHHPNEFHFGSVF 251
Query: 240 RAS--VGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
A +G +E + QIH L +K L+ ++ SL D+YA+ + SA +++ + D
Sbjct: 252 SACGVLGSLEYGE--QIHSLSVKYRLDHNSYAGCSLSDMYARCKKLESAKRVFYGIDAPD 309
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
++S ++I+ + + S EA L +M + D + + +L C ++ GR +H
Sbjct: 310 LVSWNSIINACSVEGLLS-EAMVLLSEMRGSGLRPDGITVRGLLCACVGCDAIQHGRLMH 368
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
++ K D +V N+L+ MYA+ + + A F E D++V++W S++ +H +
Sbjct: 369 SYLVKLGLDGDVSVCNSLLSMYARCMDFSSAMDVFHETRDRDVVTWNSILTACVQHQHLE 428
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMIN---KYRILPRAEHF 474
+L+ ++ + ++ ++L A + G +E+ + K ++
Sbjct: 429 VVFKLFNLLQRSLPSLDRISLNNVLSASAELGY----FEMVKQVHTCTFKVGLVNDTMLS 484
Query: 475 SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA-ILG-ACSIYGNTSLGELAARNLFDM 532
+ ++D +A+ G L+ A + M WS+ I+G A S Y +L A +
Sbjct: 485 NGLIDTYAKCGSLDDAVKLFEMMGTNSDVFSWSSLIVGYAQSGYPRKALDLFARMRNLGV 544
Query: 533 EPEKSVNYVVLSNIYTA 549
P N+V + TA
Sbjct: 545 RP----NHVTFVGVLTA 557
>gi|18409250|ref|NP_564961.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75168871|sp|Q9C507.1|PP111_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial; Flags: Precursor
gi|12325094|gb|AAG52503.1|AC018364_21 hypothetical protein; 27026-24663 [Arabidopsis thaliana]
gi|12597785|gb|AAG60097.1|AC073178_8 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332196793|gb|AEE34914.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 787
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 183/586 (31%), Positives = 320/586 (54%), Gaps = 11/586 (1%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITN 59
+V + + G++ +AL+ D ++P T +S+++ C + R A +H I
Sbjct: 172 TLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRK 231
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
++ + L ++ Y+K GD+LS+ + F+++ ++N VSWTAMIS Y + + E AL F
Sbjct: 232 MFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSF 291
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS-ALLDLYAK 178
S M++SG+ N T S L +C + ++ G+ + G + N S AL++LYA+
Sbjct: 292 SEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAE 351
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
CG + D + + +++V+WN++I A +G + LFR M+ Q +KPD FTL S
Sbjct: 352 CGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASS 411
Query: 239 LRA--SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT 296
+ A + G + L K QIH +I+ + S + SLID+Y+K GS+ SA ++ +
Sbjct: 412 ISACENAGLVPLGK--QIHGHVIRTDV-SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHR 468
Query: 297 DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI 356
+++ +++ GF+++ N S EA LF M + +++V ++ C+++ SL G+ +
Sbjct: 469 SVVTWNSMLCGFSQNGN-SVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWV 527
Query: 357 HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYG 416
H D ALIDMYAK G++ A F M ++++SW+S+I Y HG
Sbjct: 528 H-HKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRI 586
Query: 417 HEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSC 476
AI + +M G PN+V F+++L AC H+G EG F +++ + + P +EHF+C
Sbjct: 587 GSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYF-NLMKSFGVSPNSEHFAC 645
Query: 477 VVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEK 536
+DL +R G L+ AY I++M AS+W +++ C I+ + + +L D+ +
Sbjct: 646 FIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDD 705
Query: 537 SVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+ Y +LSNIY G W+ R+ R M+ +L+K PGYS ++ +K
Sbjct: 706 TGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQK 751
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 156/547 (28%), Positives = 286/547 (52%), Gaps = 47/547 (8%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHL-----IHAHIITNGYESNLHLSTKVIIFYAKVGD 80
T + + S+L+ C A + HL +H II G + + + T ++ Y + G+
Sbjct: 96 TQISKFVFPSVLRAC----AGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGN 151
Query: 81 VLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRA 140
+ A K FD MP R++V+W+ ++S +NG AL +F M+ GV + T S +
Sbjct: 152 LSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEG 211
Query: 141 CARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSW 200
CA + L+ R + G I + F + + ++LL +Y+KCG + + +FE+I +K+ VSW
Sbjct: 212 CAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSW 271
Query: 201 NAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLII 259
AMI F++ + F M++ G++P+ TL S+L +S G I L++ + +H +
Sbjct: 272 TAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVL-SSCGLIGLIREGKSVHGFAV 330
Query: 260 KLGLESS-NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEA 318
+ L+ + L+ +L+++YA+ G + + R + +I++ +LIS +A +A
Sbjct: 331 RRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAH-RGMVIQA 389
Query: 319 FDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDM 378
LF+ M+ +++ D L ++ C N + LG+QIH + S D V N+LIDM
Sbjct: 390 LGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDM 448
Query: 379 YAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTF 438
Y+KSG + A+ F+++ ++V++W S++ G++++G EAI L+ M H + N+VTF
Sbjct: 449 YSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTF 508
Query: 439 LSLLFACSHTGLTCEG-W-----------ELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
L+++ ACS G +G W +LFTD + ++D++A+ G
Sbjct: 509 LAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTD--------------TALIDMYAKCGD 554
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD--MEPEKSVNYVVLS 544
L +A + R M+ + S S+++ A ++G +A + F+ +E N VV
Sbjct: 555 LNAAETVFRAMSSRSIVSW-SSMINAYGMHGRIG----SAISTFNQMVESGTKPNEVVFM 609
Query: 545 NIYTAAG 551
N+ +A G
Sbjct: 610 NVLSACG 616
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 128/509 (25%), Positives = 264/509 (51%), Gaps = 24/509 (4%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLS-TKVIIFYAKVGDVLSARKAFD 89
+ YM L + C + R +HAH++ G L TK+I YA +G S+R F+
Sbjct: 2 TQYMPLFRSC---SSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFE 58
Query: 90 RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR-WLQ 148
P + + +I + A+ ++ ++ + ++F + S LRACA R L
Sbjct: 59 AFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLS 118
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G + G I KG ++ ++++LL +Y + G + DA +F+ + +D+V+W+ ++
Sbjct: 119 VGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCL 178
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLESS 266
G + +F+ M+ G++PD T+ S++ A +G + + + +H I + +
Sbjct: 179 ENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIAR--SVHGQITRKMFDLD 236
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
L SL+ +Y+K G + S+ +++ + K + +S TA+IS + R + S++A F +MI
Sbjct: 237 ETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGE-FSEKALRSFSEMI 295
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ--SSYDAAVGNALIDMYAKSGE 384
+ + V L +L+ C + + G+ +H FA + + +Y+ ++ AL+++YA+ G+
Sbjct: 296 KSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYE-SLSLALVELYAECGK 354
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
++D + D+N+++W SLI+ YA G +A+ L+++M + + P+ T S + A
Sbjct: 355 LSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISA 414
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHF--SCVVDLFARRGQLESAYNMIRQMNIKPT 502
C + GL G ++ +I ++ F + ++D++++ G ++SA + Q+ +
Sbjct: 415 CENAGLVPLGKQIHGHVIRT----DVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSV 470
Query: 503 ASLWSAILGACSIYGNTSLGELAARNLFD 531
+ W+++L S GN+ + A +LFD
Sbjct: 471 VT-WNSMLCGFSQNGNS----VEAISLFD 494
>gi|293331543|ref|NP_001169748.1| uncharacterized protein LOC100383629 [Zea mays]
gi|224031397|gb|ACN34774.1| unknown [Zea mays]
Length = 546
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 179/515 (34%), Positives = 282/515 (54%), Gaps = 11/515 (2%)
Query: 74 FYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA---N 130
Y + G A + FD M R+ VSW +++S A +AL + ML + A +
Sbjct: 1 MYGRCGCRGDAVRVFDEMALRDSVSWNSLLSASASA---TDALALLRRMLSAAPGAAACD 57
Query: 131 QFTYSSALRACARMRWLQGG---RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWI 187
T ++ L ACAR G + G + V +AL+ Y +C A
Sbjct: 58 HATLTTVLSACARAGGGTGSASLPAVHGLAASCGLDAEVSVGNALITAYFECSSPGSAER 117
Query: 188 LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIE 247
+F+ + ++V++W AM+ G+A +S LFR MR+ + + + S L A G
Sbjct: 118 VFDGMADRNVITWTAMVSGMARAERYSESLSLFR-QMRRAVDANRASYSSSLLACAGSRA 176
Query: 248 LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG 307
+ QIH L +K GLE+ + L+D+Y+K G + A +++RS D +S T +++G
Sbjct: 177 AREGQQIHGLAVKAGLETDLHVESELMDMYSKCGLMEDALRVFRSGQDPDEVSLTVILAG 236
Query: 308 FARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSY 367
FA++ +EAF LF +M+ K + +D ++ +L A LG+QIHA A K
Sbjct: 237 FAQN-GLEEEAFRLFAEMVGKGIRVDANMVSAVLGAFGASAPFALGKQIHALAIKRCFGG 295
Query: 368 DAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMK 427
+ V N LI+MY+K GE+ ++ R FD KN ++W S+IA YA+HG+G E L++ M+
Sbjct: 296 NTYVCNGLINMYSKCGELQESIRVFDGTPSKNTVTWNSIIAAYARHGHGWEVFGLFESME 355
Query: 428 HEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQL 487
+G+ P DVTFLSLL CSH G +G E+ M +KY I P+ EH++CVVD+ R QL
Sbjct: 356 ADGVKPTDVTFLSLLHGCSHVGSPRKGLEILDSMPSKYGIHPKVEHYACVVDMLGRASQL 415
Query: 488 ESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIY 547
+ A I K +A LW +++GACS + N+ +GE AA L ++P+ + YV+LSN+Y
Sbjct: 416 DDAKAFIEDGPFKDSALLWQSLMGACSFHKNSGVGECAAEKLLLLDPDCTAAYVLLSNVY 475
Query: 548 TAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
++ G WD+ + K M R LRK+ G S+++ K+
Sbjct: 476 SSEGRWDDRARIMKRMRARGLRKDTGKSWIELEKE 510
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 190/376 (50%), Gaps = 9/376 (2%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H + G ++ + + +I Y + SA + FD M +RNV++WTAM+SG A+
Sbjct: 83 VHGLAASCGLDAEVSVGNALITAYFECSSPGSAERVFDGMADRNVITWTAMVSGMARAER 142
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+L +F M R+ V AN+ +YSS+L ACA R + G+ I G K +L V+S
Sbjct: 143 YSESLSLFRQMRRA-VDANRASYSSSLLACAGSRAAREGQQIHGLAVKAGLETDLHVESE 201
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+D+Y+KCG +EDA +F + D VS ++ G A G +++F LF M+ +G++ D
Sbjct: 202 LMDMYSKCGLMEDALRVFRSGQDPDEVSLTVILAGFAQNGLEEEAFRLFAEMVGKGIRVD 261
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
+ ++L A QIH L IK + + LI++Y+K G ++ + +++
Sbjct: 262 ANMVSAVLGAFGASAPFALGKQIHALAIKRCFGGNTYVCNGLINMYSKCGELQESIRVFD 321
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
+ ++ ++I+ +AR H E F LF+ M + DV +L+ C++V S
Sbjct: 322 GTPSKNTVTWNSIIAAYAR-HGHGWEVFGLFESMEADGVKPTDVTFLSLLHGCSHVGSPR 380
Query: 352 LGRQI-HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD--KNVISWTSLIA 408
G +I + KY ++DM ++ ++ DA +AF E G + + W SL+
Sbjct: 381 KGLEILDSMPSKYGIHPKVEHYACVVDMLGRASQLDDA-KAFIEDGPFKDSALLWQSLMG 439
Query: 409 GYAKH---GYGHEAIE 421
+ H G G A E
Sbjct: 440 ACSFHKNSGVGECAAE 455
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 112/209 (53%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
++Y S L C +A R+ IH + G E++LH+ ++++ Y+K G + A + F
Sbjct: 162 ASYSSSLLACAGSRAAREGQQIHGLAVKAGLETDLHVESELMDMYSKCGLMEDALRVFRS 221
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+ + VS T +++G+AQNG +E A +F+ M+ G+R + S+ L A G
Sbjct: 222 GQDPDEVSLTVILAGFAQNGLEEEAFRLFAEMVGKGIRVDANMVSAVLGAFGASAPFALG 281
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ I K F N +V + L+++Y+KCG ++++ +F+ K+ V+WN++I A
Sbjct: 282 KQIHALAIKRCFGGNTYVCNGLINMYSKCGELQESIRVFDGTPSKNTVTWNSIIAAYARH 341
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G + F LF SM G+KP T S+L
Sbjct: 342 GHGWEVFGLFESMEADGVKPTDVTFLSLL 370
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 179/529 (33%), Positives = 296/529 (55%), Gaps = 35/529 (6%)
Query: 77 KVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLR------SGVRAN 130
++GD AR+ FD MPE++VVSW +++SGYAQNGY + A VF M +G+ A
Sbjct: 126 RLGD---ARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAA 182
Query: 131 QFTYSSALRAC----ARMRW-------LQGGRMIQGSIQKGRFV-ENLFVKSA-----LL 173
AC ++ W L GG + + + R++ + + V+ A ++
Sbjct: 183 YVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMI 242
Query: 174 DLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCF 233
YA+ G + A LF+ +DV +W AM+ G G D++ F M + +
Sbjct: 243 SGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK----NEV 298
Query: 234 TLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ +++ G ++ K+ +L + + + ++I Y + G I A + + M
Sbjct: 299 SYNAMI---AGYVQTKKMDIARELFESMPCRNISSWN-TMITGYGQIGDIAQARKFFDMM 354
Query: 294 LKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG 353
+ D +S A+I+G+A+ H +EA ++F ++ ++ L+ CA++A+L LG
Sbjct: 355 PQRDCVSWAAIIAGYAQS-GHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELG 413
Query: 354 RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKH 413
+QIH A K VGNAL+ MY K G I +AN F+ + +K+V+SW +++AGYA+H
Sbjct: 414 KQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARH 473
Query: 414 GYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEH 473
G+G +A+ +++ MK G+ P+++T + +L ACSHTGL G E F M Y ++P ++H
Sbjct: 474 GFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKH 533
Query: 474 FSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDME 533
++C++DL R G+LE A ++IR M +P A+ W A+LGA I+GNT LGE AA +F ME
Sbjct: 534 YTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKME 593
Query: 534 PEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
P+ S YV+LSN+Y A+G W +A K R M + ++K PGYS+++ K
Sbjct: 594 PQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNK 642
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 179/384 (46%), Gaps = 48/384 (12%)
Query: 90 RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG 149
R+ + +++ W IS + +NG+ ++AL VF+ M R + +Y++ + R
Sbjct: 43 RVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRR----SSVSYNAMISGYLRNSKFNL 98
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
R + + + +LF + +L Y + + DA LF+ + KDVVSWN+++ G A
Sbjct: 99 ARNLFDQMPE----RDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQ 154
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV--GGIE----LMKISQIHDLI----I 259
G+ D++ +F +M + + + +L A V G IE L + DLI +
Sbjct: 155 NGYVDEAREVFDNMPEK----NSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCL 210
Query: 260 KLGLESSNKLT-----------------GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCT 302
G KL ++I YA+ G + A +L+ D+ + T
Sbjct: 211 MGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWT 270
Query: 303 ALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK 362
A++SG+ + + EA F +M K ++V M+ +++ R++ F+
Sbjct: 271 AMVSGYVQ-NGMLDEAKTFFDEMPEK----NEVSYNAMIAGYVQTKKMDIAREL----FE 321
Query: 363 YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIEL 422
+ + N +I Y + G+IA A + FD M ++ +SW ++IAGYA+ G+ EA+ +
Sbjct: 322 SMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNM 381
Query: 423 YKKMKHEGMVPNDVTFLSLLFACS 446
+ ++K +G N TF L C+
Sbjct: 382 FVEIKQDGESLNRATFGCALSTCA 405
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 4/213 (1%)
Query: 3 IVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
I+ ++G ++AL + L+ +T+ L C D A IH + G
Sbjct: 365 IIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMG 424
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
Y + + ++ Y K G + A F+ + E++VVSW M++GYA++G+ AL VF
Sbjct: 425 YGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFE 484
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGR-FVENLFVKSALLDLYAKC 179
+M +GV+ ++ T L AC+ L G S+ K + + ++DL +
Sbjct: 485 SMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRA 544
Query: 180 GWIEDAWILFERIE-RKDVVSWNAMIGGLAMQG 211
G +E+A L + + SW A++G + G
Sbjct: 545 GRLEEAQDLIRNMPFQPGAASWGALLGASRIHG 577
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 98/232 (42%), Gaps = 56/232 (24%)
Query: 373 NALIDMYAKSGEIADANRAFDEMGDK-------------------------------NVI 401
NA+I Y ++ + A FD+M ++ +V+
Sbjct: 84 NAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVV 143
Query: 402 SWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFT-- 459
SW SL++GYA++GY EA E++ M + N +++ LL A H G E LF
Sbjct: 144 SWNSLLSGYAQNGYVDEAREVFDNMPEK----NSISWNGLLAAYVHNGRIEEACLLFESK 199
Query: 460 ---DMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIY 516
D+I+ ++C++ F R+ +L A + +M ++ S W+ ++ +
Sbjct: 200 SDWDLIS----------WNCLMGGFVRKKKLGDARWLFDKMPVRDAIS-WNTMISGYAQG 248
Query: 517 GNTSLGELAARNLFDMEPEKSV-NYVVLSNIYTAAGAWDNARKTRKLMEERS 567
G S AR LFD P + V + + + Y G D A+ M E++
Sbjct: 249 GGLS----QARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKN 296
>gi|225445472|ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial [Vitis vinifera]
Length = 773
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 183/580 (31%), Positives = 314/580 (54%), Gaps = 12/580 (2%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDT--LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
N V + F+ AL F+L T D T ++L FC D + +H+ I+
Sbjct: 148 NTVLSGFQRSD--DALNFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKC 205
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDE-NALLV 118
G + + + +I Y++ ++ AR+ FD M +++VSW AM+SGYAQ G A+LV
Sbjct: 206 GLDCEVFVGNALITMYSRCCRLVEARRVFDEMRNKDLVSWNAMLSGYAQEGNSGLEAILV 265
Query: 119 FSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
F ML+ G++ + +++ A+ AC + + GR I K + ++ V + L+ Y+K
Sbjct: 266 FLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSK 325
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
C IEDA ++FE I ++VVSW MI +D+ LF M R G+ P+ T +
Sbjct: 326 CEDIEDAKLVFESIIDRNVVSWTTMI-----SISEEDATSLFNEMRRDGVYPNDVTFVGL 380
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
+ A + + IH + +K S ++ SLI +YAK+ S+ + +++ + +I
Sbjct: 381 IHAITMKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREI 440
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNIC-ANVASLNLGRQIH 357
IS +LISG+A++ +EA F +++ + ++ +I A S+ G++ H
Sbjct: 441 ISWNSLISGYAQN-GLWQEALQTFLSALMESRPNEFTFGSVLSSIASAEAISMRHGQRCH 499
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
+ K + + V +AL+DMYAK G I ++ F E KN ++WT++I+ +A+HG
Sbjct: 500 SHILKLGLNTNPIVSSALLDMYAKRGSICESLGVFSETPLKNEVAWTAIISAHARHGDYE 559
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
+ L+K M+ EG+ P+ +TFL+++ AC G+ G++LF M+ + I P EH+S +
Sbjct: 560 AVMNLFKDMEREGVKPDSITFLAVITACGRKGMVDTGYQLFNSMVKDHLIEPSPEHYSSM 619
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKS 537
VD+ R G+L+ A + Q+ S+ ++LGAC I+GN + + A +L +MEP S
Sbjct: 620 VDMLGRAGRLKEAEEFVGQIPGGAGLSVLQSLLGACRIHGNVDMAKRVADDLIEMEPMGS 679
Query: 538 VNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
+YV++SN+Y G W+ K RK M ER +RK G+S++
Sbjct: 680 GSYVLMSNLYAEKGEWEKVAKIRKGMRERGVRKEIGFSWV 719
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 143/512 (27%), Positives = 255/512 (49%), Gaps = 22/512 (4%)
Query: 28 LDPSTYMSLLQFCI-DKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
+D T +L+ C D K Q IHA I++G+ S++ + ++ Y K G A
Sbjct: 78 IDQVTVAIVLKACCGDSKLGCQ---IHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALV 134
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
F+ + ++VSW ++SG+ ++ ++AL M +GV + T ++ L C+
Sbjct: 135 VFENLNNPDIVSWNTVLSGFQRS---DDALNFALRMNFTGVAFDAVTCTTVLAFCSDHEG 191
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
G + I K +FV +AL+ +Y++C + +A +F+ + KD+VSWNAM+ G
Sbjct: 192 FIFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARRVFDEMRNKDLVSWNAMLSG 251
Query: 207 LAMQGFND-DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
A +G + ++ +F M+++GMK D + + A G E QIH L +K+G ++
Sbjct: 252 YAQEGNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDT 311
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
K+ LI Y+K I A ++ S++ +++S T +IS D A LF +M
Sbjct: 312 HVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMISISEED------ATSLFNEM 365
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ +DV +++ + G+ IH K + V N+LI MYAK +
Sbjct: 366 RRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESM 425
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA- 444
+D+ + F+E+ + +ISW SLI+GYA++G EA++ + E PN+ TF S+L +
Sbjct: 426 SDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQTFLSALMESR-PNEFTFGSVLSSI 484
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
S ++ + I K + S ++D++A+RG + + + + +K +
Sbjct: 485 ASAEAISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSICESLGVFSETPLKNEVA 544
Query: 505 LWSAILGACSIYGNTSLGELAARNLF-DMEPE 535
W+AI+ A + +G+ A NLF DME E
Sbjct: 545 -WTAIISAHARHGDYE----AVMNLFKDMERE 571
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 130/497 (26%), Positives = 244/497 (49%), Gaps = 24/497 (4%)
Query: 84 ARKAFDRMPERNVVSWT-AMISGYAQNGYDENALLVFSAMLRSGVRAN--QFTYSSALRA 140
+ D+ P+ + S +M++ +N E AL +F L+ G N Q T + L+A
Sbjct: 31 VHQPLDQSPQTTIASLNRSMLTALRRNLSLE-ALDLFKKQLQWGFVGNIDQVTVAIVLKA 89
Query: 141 CARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSW 200
C L G ++ +I G F+ ++ V ++L+++Y K G + A ++FE + D+VSW
Sbjct: 90 CCGDSKL-GCQIHAFAISSG-FISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSW 147
Query: 201 NAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIK 260
N ++ G +DD+ M G+ D T ++L + Q+H I+K
Sbjct: 148 NTVLSGFQR---SDDALNFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILK 204
Query: 261 LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFD 320
GL+ + +LI +Y++ + A +++ M D++S A++SG+A++ N EA
Sbjct: 205 CGLDCEVFVGNALITMYSRCCRLVEARRVFDEMRNKDLVSWNAMLSGYAQEGNSGLEAIL 264
Query: 321 LFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYA 380
+F +M+ + M +D V ++ C + LGRQIH+ A K V N LI Y+
Sbjct: 265 VFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYS 324
Query: 381 KSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
K +I DA F+ + D+NV+SWT++I+ + +A L+ +M+ +G+ PNDVTF+
Sbjct: 325 KCEDIEDAKLVFESIIDRNVVSWTTMISISEE-----DATSLFNEMRRDGVYPNDVTFVG 379
Query: 441 LLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIK 500
L+ A + L EG ++ + K L + ++ ++A+ + + + ++N +
Sbjct: 380 LIHAITMKNLVEEG-QMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYR 438
Query: 501 PTASLWSAILGACSIYGNTSLGELAARN----LFDMEPEKSVNYVVLSNIYTA-AGAWDN 555
S W++++ S Y L + A + L + P + VLS+I +A A + +
Sbjct: 439 EIIS-WNSLI---SGYAQNGLWQEALQTFLSALMESRPNEFTFGSVLSSIASAEAISMRH 494
Query: 556 ARKTRKLMEERSLRKNP 572
++ + + L NP
Sbjct: 495 GQRCHSHILKLGLNTNP 511
>gi|356565618|ref|XP_003551036.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Glycine max]
Length = 619
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 190/559 (33%), Positives = 284/559 (50%), Gaps = 45/559 (8%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS 83
PD + P +L+ C +H ++ G ESNL + V+ Y+K GDV S
Sbjct: 101 PDGYVFPK----VLKACAQLSRFGSGRGVHKDVVVFGEESNLQVRNSVLDMYSKCGDVGS 156
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
AR+ FD M ER+V SW +M+SGY NG A+ V M + G
Sbjct: 157 ARQVFDEMSERDVFSWNSMMSGYVWNGLPHKAVEVLGVMKKDGCGCE------------- 203
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
++ + ++D Y + G +A +F IE +V+SW +
Sbjct: 204 --------------------PDVVTWNTVMDAYCRMGQCCEASRVFGEIEDPNVISWTIL 243
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGM-KPDCFTLGSILRASVGGIELMKISQIHDLIIKL- 261
I G A G +D S +FR M+ GM PD L +L + L +IH +K+
Sbjct: 244 ISGYAGVGRHDVSLGIFRQMVNVGMVSPDVDALSGVLVSCRHLGALASGKEIHGYGLKIM 303
Query: 262 -GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFD 320
G +L+ +YA +G + A ++ M K+D+++ A+I G D A D
Sbjct: 304 CGDVFYRSAGAALLMLYAGWGRLDCADNVFWRMDKSDVVTWNAMIFGLV-DVGLVDLALD 362
Query: 321 LFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYA 380
F++M + +GID + +L +C L G++IHA+ K S V NALI MY+
Sbjct: 363 CFREMQGRGVGIDGRTISSILPVC----DLRCGKEIHAYVRKCNFSGVIPVYNALIHMYS 418
Query: 381 KSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
G IA A F M ++++SW ++I G+ HG G A+EL ++M G+ P+ VTF
Sbjct: 419 IRGCIAYAYSVFSTMVARDLVSWNTIIGGFGTHGLGQTALELLQEMSGSGVRPDLVTFSC 478
Query: 441 LLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIK 500
L ACSH+GL EG ELF M + + P EHFSCVVD+ AR G+LE A++ I QM +
Sbjct: 479 ALSACSHSGLVNEGIELFYRMTKDFSMTPAREHFSCVVDMLARAGRLEDAFHFINQMPQE 538
Query: 501 PTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTR 560
P +W A+L AC + N S+G+LAA L +EP ++ +YV LSNIY+ AG WD+A + R
Sbjct: 539 PNNHVWGALLAACQEHQNISVGKLAAEKLISLEPHEAGHYVTLSNIYSRAGRWDDAARVR 598
Query: 561 KLMEERSLRKNPGYSFLQS 579
K+M+ L K G+S + +
Sbjct: 599 KMMDGHGLLKPSGHSLVGT 617
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 126/508 (24%), Positives = 235/508 (46%), Gaps = 57/508 (11%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
++ SLLQ C K QA +H I+ G N TK+I YA D+ SA ++
Sbjct: 7 SFNSLLQAC---KTLNQAKQLHHRILLTGSHHNHFFVTKLIQIYADSNDLRSAVTLLHQI 63
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
NV ++T+++S ++++G + ++ + R+GV + + + L+ACA++ GR
Sbjct: 64 SHPNVFAFTSILSFHSRHGLGHQCIQTYAELRRNGVVPDGYVFPKVLKACAQLSRFGSGR 123
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ + NL V++++LD+Y+KCG + A +F+ + +DV SWN+M+ G G
Sbjct: 124 GVHKDVVVFGEESNLQVRNSVLDMYSKCGDVGSARQVFDEMSERDVFSWNSMMSGYVWNG 183
Query: 212 FNDDSFWLFRSMMRQ--GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
+ + M + G +PD T +++
Sbjct: 184 LPHKAVEVLGVMKKDGCGCEPDVVTWNTVM------------------------------ 213
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
D Y + G A +++ + ++IS T LISG+A H + +F+ M+
Sbjct: 214 -----DAYCRMGQCCEASRVFGEIEDPNVISWTILISGYAGVGRHDV-SLGIFRQMVNVG 267
Query: 330 MGIDDV-ILCLMLNICANVASLNLGRQIHAFAFKYQSS--YDAAVGNALIDMYAKSGEIA 386
M DV L +L C ++ +L G++IH + K + + G AL+ +YA G +
Sbjct: 268 MVSPDVDALSGVLVSCRHLGALASGKEIHGYGLKIMCGDVFYRSAGAALLMLYAGWGRLD 327
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A+ F M +V++W ++I G G A++ +++M+ G+ + T S+L C
Sbjct: 328 CADNVFWRMDKSDVVTWNAMIFGLVDVGLVDLALDCFREMQGRGVGIDGRTISSILPVCD 387
Query: 447 HTGLTCEGWEL--FTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
L C G E+ + N ++P ++ ++ +++ RG + AY++ M + S
Sbjct: 388 ---LRC-GKEIHAYVRKCNFSGVIPV---YNALIHMYSIRGCIAYAYSVFSTMVARDLVS 440
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDM 532
W+ I+G +G LG+ A L +M
Sbjct: 441 -WNTIIGG---FGTHGLGQTALELLQEM 464
>gi|413953302|gb|AFW85951.1| hypothetical protein ZEAMMB73_518426 [Zea mays]
Length = 620
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 189/545 (34%), Positives = 294/545 (53%), Gaps = 48/545 (8%)
Query: 70 KVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA 129
++I+ A G V ARK FD PER+VVSWTA++S YA+ G +A +F RS R
Sbjct: 45 RLIVDLAAAGRVWDARKLFDGTPERDVVSWTALVSAYARRGMLRDARSLFD---RSDARR 101
Query: 130 NQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVE-NLFVKSALLDLYAKCGWIEDAWIL 188
N T+++ L AR G + + + R + N+ + +L+ YA G DA L
Sbjct: 102 NVVTWTALLSGYAR-----AGLVDEAEVLFQRMPQRNVVSWNTMLEAYAVAGRAGDACAL 156
Query: 189 FERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIEL 248
F+R+ +D SWN ++ L G D + LF M + + + + R+ G ++
Sbjct: 157 FDRMPVRDAGSWNILLAMLVRSGSVDKARELFGRMPERDVMAWTTMVDGVARS--GNVDE 214
Query: 249 MKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGF 308
++ + D + + + S N ++I Y + + A L+ M DI SC +I+GF
Sbjct: 215 ARL--LFDSMPERNVVSWN----AMISGYTRNHRLDEALDLFTKMPHRDIASCNIMITGF 268
Query: 309 A--RDDNHSKEAFD----------------------------LFKDMILKKMGIDDVILC 338
+D +++ FD LF+ M++ + + V
Sbjct: 269 IQNKDLKRARKLFDEMPERNVVTWTTMMNGYLKGKQSELSLGLFRGMLMSGIRPNQVTFL 328
Query: 339 LMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK 398
L+ C+++A+L G+Q+H K D VG+AL+++YAK GE+ A + FD +K
Sbjct: 329 GALDACSDLATLCEGKQVHQMICKTAFQVDTFVGSALMNVYAKCGEVGLARKLFDLSREK 388
Query: 399 NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELF 458
++ISW +IA YA HG G EAI LY+KM+ G PNDVT++ LL ACSH+GL EG ++F
Sbjct: 389 DLISWNGIIAAYAHHGVGIEAIHLYEKMQGNGYRPNDVTYVVLLSACSHSGLVDEGLKIF 448
Query: 459 TDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP-TASLWSAILGACSIYG 517
M+N I R EH++C++DL +R G+L+ A +I + IKP + S+WSA+LG C+ +G
Sbjct: 449 ESMVNDRSIAVRDEHYTCLIDLCSRAGRLDDAKRLIHYLKIKPASGSVWSALLGGCNAHG 508
Query: 518 NTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
N S+G LAARNL EP+ + Y +LSNIY +AG W A + R M R L+K PG S++
Sbjct: 509 NESIGNLAARNLIQAEPDNAGTYTLLSNIYASAGKWKEAAEIRSEMNNRGLKKQPGCSWI 568
Query: 578 QSSKK 582
+ + K
Sbjct: 569 EVANK 573
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 160/356 (44%), Gaps = 43/356 (12%)
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSA 121
E ++ T ++ A+ G+V AR FD MPERNVVSW AMISGY +N + AL +F+
Sbjct: 193 ERDVMAWTTMVDGVARSGNVDEARLLFDSMPERNVVSWNAMISGYTRNHRLDEALDLFTK 252
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
M + + MI G F++N +K A
Sbjct: 253 MPHRDIASCNI-------------------MITG------FIQNKDLKRARK-------- 279
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
LF+ + ++VV+W M+ G ++ S LFR M+ G++P+ T L A
Sbjct: 280 ------LFDEMPERNVVTWTTMMNGYLKGKQSELSLGLFRGMLMSGIRPNQVTFLGALDA 333
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC 301
L + Q+H +I K + + +L++VYAK G + A +L+ + D+IS
Sbjct: 334 CSDLATLCEGKQVHQMICKTAFQVDTFVGSALMNVYAKCGEVGLARKLFDLSREKDLISW 393
Query: 302 TALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF 361
+I+ +A EA L++ M +DV ++L+ C++ ++ G +I
Sbjct: 394 NGIIAAYAH-HGVGIEAIHLYEKMQGNGYRPNDVTYVVLLSACSHSGLVDEGLKIFESMV 452
Query: 362 KYQS-SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVIS--WTSLIAGYAKHG 414
+S + LID+ +++G + DA R + K W++L+ G HG
Sbjct: 453 NDRSIAVRDEHYTCLIDLCSRAGRLDDAKRLIHYLKIKPASGSVWSALLGGCNAHG 508
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 108/222 (48%), Gaps = 14/222 (6%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T++ L C D + +H I ++ + + + ++ YAK G+V ARK FD
Sbjct: 326 TFLGALDACSDLATLCEGKQVHQMICKTAFQVDTFVGSALMNVYAKCGEVGLARKLFDLS 385
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
E++++SW +I+ YA +G A+ ++ M +G R N TY L AC+ + G
Sbjct: 386 REKDLISWNGIIAAYAHHGVGIEAIHLYEKMQGNGYRPNDVTYVVLLSACSHSGLVDEGL 445
Query: 152 MIQGSIQKGRFVENLFVK----SALLDLYAKCGWIEDA--WILFERIERKDVVSWNAMIG 205
I S+ R ++ V+ + L+DL ++ G ++DA I + +I+ W+A++G
Sbjct: 446 KIFESMVNDR---SIAVRDEHYTCLIDLCSRAGRLDDAKRLIHYLKIKPASGSVWSALLG 502
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPD---CFTLGSILRASVG 244
G G R++++ +PD +TL S + AS G
Sbjct: 503 GCNAHGNESIGNLAARNLIQA--EPDNAGTYTLLSNIYASAG 542
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 21/229 (9%)
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVG-------NALIDMYAKSGEIADANRAFDEMGDKNV 400
+S +L + ++ ++ AAVG N LI A +G + DA + FD +++V
Sbjct: 12 SSPHLRHAVAYVSYGSAAATSAAVGLERAQDPNRLIVDLAAAGRVWDARKLFDGTPERDV 71
Query: 401 ISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTD 460
+SWT+L++ YA+ G +A L+ + N VT+ +LL + GL E LF
Sbjct: 72 VSWTALVSAYARRGMLRDARSLFDRSDAR---RNVVTWTALLSGYARAGLVDEAEVLFQR 128
Query: 461 MINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTS 520
M + + ++ +++ +A G+ A + +M ++ S W+ +L G+
Sbjct: 129 MPQRNVV-----SWNTMLEAYAVAGRAGDACALFDRMPVRDAGS-WNILLAMLVRSGSVD 182
Query: 521 LGELAARNLFDMEPEKSV-NYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
AR LF PE+ V + + + +G D AR M ER++
Sbjct: 183 ----KARELFGRMPERDVMAWTTMVDGVARSGNVDEARLLFDSMPERNV 227
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 184/563 (32%), Positives = 303/563 (53%), Gaps = 42/563 (7%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVL-SARKAFDRMPERNVVSWTAMISGYAQNG 110
IH + G+E ++ + T ++ Y K ++L SA K F+ M RN +W+ +I+ +Q G
Sbjct: 245 IHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAG 304
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
++A V+ R +++ + +S L AR + +++ I + N+ +
Sbjct: 305 RIDDAFAVYQ---RDPLKSVP-SRTSMLTGLARYGRIDDAKILFDQIHE----PNVVSWN 356
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
A++ Y + +++A LF R+ ++ +SW MI G A G ++ + +++ R+GM P
Sbjct: 357 AMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLP 416
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
+L S A L Q+H L +K G + ++ + +LI +Y KY SI S Q++
Sbjct: 417 SLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIF 476
Query: 291 -------------------------------RSMLKTDIISCTALISGFARDDNHSKEAF 319
+M D++S T +IS A+ D EA
Sbjct: 477 DRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQAD-QGNEAV 535
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMY 379
++F+ M+ ++ + IL ++L + N+ + LG+QIH A K V NAL+ MY
Sbjct: 536 EIFRSMLHERELPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMY 595
Query: 380 AKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFL 439
K AD+ + FD M ++++ +W ++I GYA+HG G EAI +Y+ M G++PN+VTF+
Sbjct: 596 FKCSS-ADSLKVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFV 654
Query: 440 SLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
LL ACSH+GL EG + F M + Y + P EH++C+VDL R G ++ A + I M I
Sbjct: 655 GLLHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPI 714
Query: 500 KPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKT 559
+P + +WSA+LGAC I+ N +G AA LF +EP + NYV+LSNIY++ G WD K
Sbjct: 715 EPDSVIWSALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKV 774
Query: 560 RKLMEERSLRKNPGYSFLQSSKK 582
RKLM+ER + K+PG S++Q K
Sbjct: 775 RKLMKERGVNKDPGCSWMQIKNK 797
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 188/403 (46%), Gaps = 15/403 (3%)
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
AR F+RMPERN VSWT MISGY A +F ML G+ Q S L A
Sbjct: 176 ARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRH 235
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK-CGWIEDAWILFERIERKDVVSWNA 202
+ I + K F ++ V +A+L+ Y K ++ A FE + ++ +W+
Sbjct: 236 LGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWST 295
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
+I L+ G DD+F +++ + + L + R G I+ KI + D I +
Sbjct: 296 IIAALSQAGRIDDAFAVYQRDPLKSVPSRTSMLTGLAR--YGRIDDAKI--LFDQIHEPN 351
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
+ S N ++I Y + + A L+ M + IS +I+G+AR + S++A
Sbjct: 352 VVSWN----AMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYAR-NGRSEQALVSL 406
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
+ + K M L C+N+ +L G+Q+H+ A K +++ V NALI +Y K
Sbjct: 407 QALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKY 466
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
I + FD M K+ +S+ S ++ ++ EA +++ M P+ V++ +++
Sbjct: 467 RSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPS----PDVVSWTTII 522
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRG 485
AC+ E E+F M+++ R LP + ++ L G
Sbjct: 523 SACAQADQGNEAVEIFRSMLHE-RELPNPPILTILLGLSGNLG 564
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 125/521 (23%), Positives = 226/521 (43%), Gaps = 65/521 (12%)
Query: 64 NLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML 123
NL T ++ YA+ G V AR+ FD M RN V+W AM++ Y QNG A +F AM
Sbjct: 94 NLRTGTILLSGYARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMP 153
Query: 124 RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIE 183
V + W + +L Y +E
Sbjct: 154 SRDVSS----------------W-----------------------NTMLTGYCHSQLME 174
Query: 184 DAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV 243
+A LFER+ ++ VSW MI G + + ++ +FR+M+ +GM P+ L S+L A
Sbjct: 175 EARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVR 234
Query: 244 GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAK-YGSIRSAYQLYRSMLKTDIISCT 302
+ + IH L+ K G E + ++++ Y K + SA + + M + + +
Sbjct: 235 HLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWS 294
Query: 303 ALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK 362
+I+ ++ +AF +++ LK + +L + + L QIH
Sbjct: 295 TIIAALSQ-AGRIDDAFAVYQRDPLKSVPSRTSMLTGLARYGRIDDAKILFDQIH----- 348
Query: 363 YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIEL 422
+ NA+I Y ++ + +A F+ M +N ISW +IAGYA++G +A+
Sbjct: 349 ---EPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVS 405
Query: 423 YKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSC--VVDL 480
+ + +GM+P+ + S FACS+ G ++ + + + + + C ++ L
Sbjct: 406 LQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAV---KAGCQFNSYVCNALITL 462
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNY 540
+ + + S + +M +K T S +++ + A + N E AR++F+ P V
Sbjct: 463 YGKYRSIGSVRQIFDRMTVKDTVS-YNSFMSA--LVQNNLFDE--ARDVFNNMPSPDV-- 515
Query: 541 VVLSNIYTAAGAWDNARKT----RKLMEERSLRKNPGYSFL 577
V + I +A D + R ++ ER L P + L
Sbjct: 516 VSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTIL 556
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 102/443 (23%), Positives = 171/443 (38%), Gaps = 85/443 (19%)
Query: 40 CIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR--------- 90
C + +A +H+ + G + N ++ +I Y K + S R+ FDR
Sbjct: 428 CSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSY 487
Query: 91 ----------------------MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR 128
MP +VVSWT +IS AQ A+ +F +ML
Sbjct: 488 NSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHEREL 547
Query: 129 ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWIL 188
N + L + Q G+ I K L V +AL+ +Y KC D+ +
Sbjct: 548 PNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCS-SADSLKV 606
Query: 189 FERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIE 247
F+ +E +D+ +WN +I G A G ++ +++ M+ G+ P+ T +L A S G+
Sbjct: 607 FDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGL- 665
Query: 248 LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG 307
+ + H + SS+ L++ YA C + G
Sbjct: 666 ---VDEGHQFFKSM---SSDYGLTPLLEHYA----------------------CMVDLLG 697
Query: 308 FARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSY 367
A D + A DM ++ D VI +L C ++ +GR+ F + S
Sbjct: 698 RAGD---VQGAEHFIYDMPIEP---DSVIWSALLGACKIHKNVEIGRRAAEKLFSIEPS- 750
Query: 368 DAAVGNALIDMYAKSG---EIADANRAFDEMG-DKNV-ISWTSL---IAGYAKHGYGHEA 419
+A L ++Y+ G E+A + E G +K+ SW + + + HE
Sbjct: 751 NAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDPGCSWMQIKNKMHSFVTGDEEHEQ 810
Query: 420 I--------ELYKKMKHEGMVPN 434
I ELY +K G VP+
Sbjct: 811 IQNIYATLWELYTLLKATGYVPD 833
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/383 (19%), Positives = 163/383 (42%), Gaps = 51/383 (13%)
Query: 169 KSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGM 228
+SA + + G + +A +F+ + +D+++WN+MI G D L ++ +
Sbjct: 36 QSARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNL 95
Query: 229 KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQ 288
+ L RA ++ + +G+ ++ +++ Y + G I A +
Sbjct: 96 RTGTILLSGYARAG-------RVRDARRVFDGMGVRNTVAWN-AMVTCYVQNGDITLARK 147
Query: 289 LYRSMLKTDI-------------------------------ISCTALISGFARDDNHSKE 317
L+ +M D+ +S T +ISG+ + H +
Sbjct: 148 LFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGR- 206
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
A+D+F+ M+ + M + L +L+ ++ + IH K D VG A+++
Sbjct: 207 AWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILN 266
Query: 378 MYAKSGEIAD-ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDV 436
Y K + D A + F+ M +N +W+++IA ++ G +A +Y++ + VP+
Sbjct: 267 GYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKS-VPSRT 325
Query: 437 TFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQ 496
+ L+ L + G + LF D I++ P ++ ++ + + ++ A ++ +
Sbjct: 326 SMLTGL---ARYGRIDDAKILF-DQIHE----PNVVSWNAMITGYMQNEMVDEAEDLFNR 377
Query: 497 MNIKPTASLWSAILGACSIYGNT 519
M + T S W+ ++ + G +
Sbjct: 378 MPFRNTIS-WAGMIAGYARNGRS 399
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 180/552 (32%), Positives = 294/552 (53%), Gaps = 34/552 (6%)
Query: 64 NLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML 123
NL ++ A+ G V + F +P+R+ VS+ A+++G+++ G A + A+L
Sbjct: 76 NLVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALL 135
Query: 124 R--SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
R +GVR ++ T S + + + GR + I + F F S L+D+YAK G
Sbjct: 136 RDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGP 195
Query: 182 IED-------------------------------AWILFERIERKDVVSWNAMIGGLAMQ 210
I D A LFE IE +D ++W M+ GL
Sbjct: 196 IGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQN 255
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
G ++ +FR M +G+ D +T GSIL A L + QIH I + E + +
Sbjct: 256 GLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVG 315
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
+L+D+Y+K S+R A ++R M+ +IIS TA+I G+ + + +EA +F +M +
Sbjct: 316 SALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQ-NGCGEEAVRVFSEMQRDGI 374
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
DD L +++ CAN+ASL G Q H A V NAL+ +Y K G I DA+R
Sbjct: 375 KPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHR 434
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
FDEM + +SWT+L+ GYA+ G E I+L++KM +G+ P+ VTF+ +L ACS +GL
Sbjct: 435 LFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGL 494
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
+G F M + I+P +H++C++DL++R G L+ A I+QM P A W+ +L
Sbjct: 495 VDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLL 554
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
AC + G+ +G+ AA NL ++P+ +YV+L +++ + G W++ K R+ M +R ++K
Sbjct: 555 SACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQVKK 614
Query: 571 NPGYSFLQSSKK 582
PG S+++ K
Sbjct: 615 EPGCSWIKYKNK 626
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 202/403 (50%), Gaps = 43/403 (10%)
Query: 42 DKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVV---- 97
D+ RQ +H I+ G+ + + ++ YAKVG + AR+ FD M +NVV
Sbjct: 160 DRALGRQ---VHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNT 216
Query: 98 ---------------------------SWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
+WT M++G QNG + AL VF M GV +
Sbjct: 217 MITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGID 276
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE 190
Q+T+ S L AC + L+ G+ I I + + +N+FV SAL+D+Y+KC + A +F
Sbjct: 277 QYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFR 336
Query: 191 RIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMK 250
R+ K+++SW AMI G G +++ +F M R G+KPD FTLGS++ + L +
Sbjct: 337 RMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEE 396
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR 310
+Q H L + GL ++ +L+ +Y K GSI A++L+ M D +S TAL+ G+A+
Sbjct: 397 GAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQ 456
Query: 311 DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA 370
+KE DLF+ M+ K + D V +L+ C+ ++ GR ++ Q +D
Sbjct: 457 -FGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGR---SYFHSMQQDHDIV 512
Query: 371 VGN----ALIDMYAKSGEIADANRAFDEMGD-KNVISWTSLIA 408
+ +ID+Y++SG + A +M + W +L++
Sbjct: 513 PLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLS 555
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 137/269 (50%), Gaps = 1/269 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D T+ S+L C A + IHA+I YE N+ + + ++ Y+K V A
Sbjct: 275 IDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAV 334
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F RM +N++SWTAMI GY QNG E A+ VFS M R G++ + FT S + +CA + L
Sbjct: 335 FRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASL 394
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G + V +AL+ LY KCG IEDA LF+ + D VSW A++ G
Sbjct: 395 EEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGY 454
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESS 266
A G ++ LF M+ +G+KPD T +L A S G+ S H + +
Sbjct: 455 AQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPL 514
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLK 295
+ +ID+Y++ G ++ A + + M +
Sbjct: 515 DDHYTCMIDLYSRSGWLKQAEEFIKQMPR 543
>gi|297817672|ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322557|gb|EFH52978.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1005
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 170/551 (30%), Positives = 303/551 (54%), Gaps = 2/551 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T +S L C + IHA ++ + + +++ +I YA+ G +L A + M
Sbjct: 266 TIVSALTACEGFSYAKLGKEIHAAVLKSTHSFEVYVCNALIAMYARCGKMLEAGRILRLM 325
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
+VV+W ++I GY QN + AL F M+ +G + ++ + +S + A R+ L G
Sbjct: 326 NNADVVTWNSLIKGYVQNLMYKEALQFFCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGM 385
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ + K + NL V + L+D+Y+KC F + KD++SW +I G A+
Sbjct: 386 ELHAYVIKHGWDSNLLVGNTLIDMYSKCNLTCYMGRAFLMMHEKDLISWTTIIAGYALND 445
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
+ ++ LFR + ++ M+ D LGSILRA ++ + +IH I++ GL + +
Sbjct: 446 CHVEALQLFRDVAKKRMEIDEMMLGSILRACSVLKSMLIVKEIHCHILRKGLIDT-VIQN 504
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
L+DVY K ++ A +++ S+ D++S T++IS A + N + EA +LF+ M +
Sbjct: 505 ELVDVYGKCRNMGYASRVFESIKGKDVVSWTSMISSSALNGNEN-EAVELFRRMAETGLL 563
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
D V L +L+ A++++L GR+IH + + + ++ A++DMYA G++ A
Sbjct: 564 ADSVALLCILSAAASLSALKKGREIHGYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAV 623
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLT 451
FD + K ++ +TS+I Y HG G ++EL+ KM+HE + P+ ++FL+LL+ACSH GL
Sbjct: 624 FDRIERKGLLQYTSMINAYGMHGCGKASVELFNKMRHENVSPDHISFLALLYACSHAGLL 683
Query: 452 CEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
EG M +Y++ P EH+ C+VD+ R + A+ ++ M +PT +W A+L
Sbjct: 684 DEGRRFLKIMELEYKLEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTTEVWCALLA 743
Query: 512 ACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKN 571
AC + +GE+AA+ L ++EP+ N V++SN++ G W++ K R M+ + K+
Sbjct: 744 ACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKH 803
Query: 572 PGYSFLQSSKK 582
PG S+++ K
Sbjct: 804 PGCSWIEMDGK 814
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 152/542 (28%), Positives = 279/542 (51%), Gaps = 12/542 (2%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD ++ LL+ C + R +H ++ G+ S + ++ YAK + +A++
Sbjct: 160 LDLYSFPVLLKACGKLRDIRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRL 219
Query: 88 FDRMPER-NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FD E+ + V W +++S Y+ +G L +F M +G +N +T SAL AC +
Sbjct: 220 FDASQEKGDAVLWNSILSSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSY 279
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
+ G+ I ++ K ++V +AL+ +YA+CG + +A + + DVV+WN++I G
Sbjct: 280 AKLGKEIHAAVLKSTHSFEVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKG 339
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
++ F M+ G KPD +L S++ AS L+ ++H +IK G +S+
Sbjct: 340 YVQNLMYKEALQFFCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSN 399
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ +LID+Y+K + + M + D+IS T +I+G+A +D H EA LF+D+
Sbjct: 400 LLVGNTLIDMYSKCNLTCYMGRAFLMMHEKDLISWTTIIAGYALNDCHV-EALQLFRDVA 458
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
K+M ID+++L +L C+ + S+ + ++IH + + D + N L+D+Y K +
Sbjct: 459 KKRMEIDEMMLGSILRACSVLKSMLIVKEIHCHILR-KGLIDTVIQNELVDVYGKCRNMG 517
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A+R F+ + K+V+SWTS+I+ A +G +EA+EL+++M G++ + V L +L A +
Sbjct: 518 YASRVFESIKGKDVVSWTSMISSSALNGNENEAVELFRRMAETGLLADSVALLCILSAAA 577
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
+G E+ ++ K L + + VVD++A G L+SA + ++ K
Sbjct: 578 SLSALKKGREIHGYLLRKGFCLEGSIAVA-VVDMYACCGDLQSAKAVFDRIERKGLLQYT 636
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEK----SVNYVVLSNIYTAAGAWDNARKTRKL 562
S I + YG G+ + M E ++++ L + AG D R+ K+
Sbjct: 637 SMI----NAYGMHGCGKASVELFNKMRHENVSPDHISFLALLYACSHAGLLDEGRRFLKI 692
Query: 563 ME 564
ME
Sbjct: 693 ME 694
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/366 (30%), Positives = 192/366 (52%), Gaps = 2/366 (0%)
Query: 82 LSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC 141
LS K FD M +R +W A+I Y NG +AL ++ M GV + +++ L+AC
Sbjct: 113 LSQEKVFDEMRDRTAFAWNALIGAYVSNGEPASALFIYRNMRVEGVPLDLYSFPVLLKAC 172
Query: 142 ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERK-DVVSW 200
++R ++ G + + K F F+ +AL+ +YAK + A LF+ + K D V W
Sbjct: 173 GKLRDIRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQEKGDAVLW 232
Query: 201 NAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIK 260
N+++ + G + ++ LFR M G + +T+ S L A G +IH ++K
Sbjct: 233 NSILSSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHAAVLK 292
Query: 261 LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFD 320
+ +LI +YA+ G + A ++ R M D+++ +LI G+ ++ + KEA
Sbjct: 293 STHSFEVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMY-KEALQ 351
Query: 321 LFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYA 380
F DMI D+V L ++ +++L G ++HA+ K+ + VGN LIDMY+
Sbjct: 352 FFCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLIDMYS 411
Query: 381 KSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
K RAF M +K++ISWT++IAGYA + EA++L++ + + M +++ S
Sbjct: 412 KCNLTCYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMMLGS 471
Query: 441 LLFACS 446
+L ACS
Sbjct: 472 ILRACS 477
>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15510, chloroplastic; Flags: Precursor
gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 866
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 180/554 (32%), Positives = 299/554 (53%), Gaps = 4/554 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ +L+ C + +H H++ GYE ++ + +I Y K GDV SAR F
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLF 254
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
DRMP R+++SW AMISGY +NG L +F AM V + T +S + AC + +
Sbjct: 255 DRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRR 314
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
GR I + F ++ V ++L +Y G +A LF R+ERKD+VSW MI G
Sbjct: 315 LGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYE 374
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
D + +R M + +KPD T+ ++L A +L ++H L IK L S
Sbjct: 375 YNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVI 434
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +LI++Y+K I A ++ ++ + ++IS T++I+G R +N EA + M +
Sbjct: 435 VANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGL-RLNNRCFEALIFLRQMKM- 492
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ + + L L CA + +L G++IHA + D + NAL+DMY + G + A
Sbjct: 493 TLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTA 552
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
F+ K+V SW L+ GY++ G G +EL+ +M + P+++TF+SLL CS +
Sbjct: 553 WSQFNSQ-KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKS 611
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
+ +G F+ M Y + P +H++CVVDL R G+L+ A+ I++M + P ++W A
Sbjct: 612 QMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGA 670
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L AC I+ LGEL+A+++F+++ + Y++L N+Y G W K R++M+E L
Sbjct: 671 LLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGL 730
Query: 569 RKNPGYSFLQSSKK 582
+ G S+++ K
Sbjct: 731 TVDAGCSWVEVKGK 744
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 148/520 (28%), Positives = 265/520 (50%), Gaps = 20/520 (3%)
Query: 11 GQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLS 68
G+L++A+K S+ +D +++L++ C K+A+ + +++ +++ + L
Sbjct: 73 GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELG 132
Query: 69 TKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML-RSGV 127
+ + + G+++ A F +M ERN+ SW ++ GYA+ GY + A+ ++ ML GV
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 128 RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWI 187
+ + +T+ LR C + L G+ + + + + ++ V +AL+ +Y KCG ++ A +
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 188 LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS--VGG 245
LF+R+ R+D++SWNAMI G G + LF +M + PD TL S++ A +G
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGD 312
Query: 246 IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALI 305
L + IH +I G + SL +Y GS R A +L+ M + DI+S T +I
Sbjct: 313 RRLGR--DIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370
Query: 306 SGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS 365
SG+ + K A D ++ M + D++ + +L+ CA + L+ G ++H A K +
Sbjct: 371 SGYEYNFLPDK-AIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL 429
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKK 425
V N LI+MY+K I A F + KNVISWTS+IAG + EA+ ++
Sbjct: 430 ISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQ 489
Query: 426 MKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK----YRILPRAEHFSCVVDLF 481
MK + PN +T + L AC+ G G E+ ++ LP A ++D++
Sbjct: 490 MKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNA-----LLDMY 543
Query: 482 ARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSL 521
R G++ +A++ K + W+ +L S G S+
Sbjct: 544 VRCGRMNTAWSQFNSQ--KKDVTSWNILLTGYSERGQGSM 581
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 212/411 (51%), Gaps = 4/411 (0%)
Query: 103 ISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRF 162
+ G NG E A+ + ++M V ++ + + +R C R + G +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 163 VENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRS 222
+ + +A L ++ + G + DAW +F ++ +++ SWN ++GG A QG+ D++ L+
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 223 MM-RQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYG 281
M+ G+KPD +T +LR G +L + ++H +++ G E + +LI +Y K G
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 282 SIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLML 341
++SA L+ M + DIIS A+ISG+ ++ E +LF M + D + L ++
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYF-ENGMCHEGLELFFAMRGLSVDPDLMTLTSVI 304
Query: 342 NICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVI 401
+ C + LGR IHA+ + D +V N+L MY +G +A + F M K+++
Sbjct: 305 SACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIV 364
Query: 402 SWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM 461
SWT++I+GY + +AI+ Y+ M + + P+++T ++L AC+ G G EL
Sbjct: 365 SWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLA 424
Query: 462 INKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
I K R++ + +++++++ ++ A ++ + K S W++I+
Sbjct: 425 I-KARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVIS-WTSIIAG 473
>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
Length = 879
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 176/548 (32%), Positives = 302/548 (55%), Gaps = 15/548 (2%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
L++ C++++ H H+ + + +T ++ FY GD+ A +AF R
Sbjct: 222 LVKLCVEERE-------HDHLHDSSF------ATALVNFYGSCGDLEQAFRAFSRH-RLE 267
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG 155
++ TAMI+ Y Q + AL +F ML GV+ ++ + L AC+ R L+ GR+I G
Sbjct: 268 LILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRIIHG 327
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD 215
+++ RF ++ +AL+++Y KCG +E+A +F ++ +DV+SWN +I + +
Sbjct: 328 FMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPE 387
Query: 216 SFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLID 275
+ L M G+K D + + L L K IH I++ G+++ L +++D
Sbjct: 388 ALHLLHLMQLDGVKADKISFVNALPLCATSEALAKGRMIHSWIVESGIKADVMLDNAILD 447
Query: 276 VYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDV 335
+Y S A +++R+M D +S A+I+ +A S EA LF+ M L D +
Sbjct: 448 MYGSCKSTDDASRVFRAMKVRDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVI 507
Query: 336 ILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEM 395
L+ CA ASL G+ +H + + V NA+++MYAKSG + A + F +M
Sbjct: 508 SFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMYAKSGTLVLARKMFGKM 567
Query: 396 GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGW 455
+VISW +I+ +A+HG+ + + +++M HEG +PNDVTF+S++ ACSH GL +G
Sbjct: 568 PLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGV 627
Query: 456 ELFTDMINKY-RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACS 514
+LF +++ + I PRAEH+ C+VDL AR G+L++A I +KP + S +LGA
Sbjct: 628 QLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGASK 687
Query: 515 IYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGY 574
++ + +A +L ++ P++S YVVLSN+Y G D K R+LM E+++RK P +
Sbjct: 688 VHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAF 747
Query: 575 SFLQSSKK 582
S + ++
Sbjct: 748 SSIAVKRR 755
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 146/522 (27%), Positives = 264/522 (50%), Gaps = 10/522 (1%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDP--STYMSLLQFC-IDKKAERQAHLIHAHIITN 59
++RA+ + G +QAL S + P ++++L C D + + IH +
Sbjct: 70 LIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGT 129
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
ES+ ++ST ++ Y K V ARK FD + + VV W AMI+ YAQ + E A+ VF
Sbjct: 130 AMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVF 189
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGR--FVENLFVKSALLDLYA 177
AML GV+A + T+ L AC++++ L+ ++++ +++ + + +AL++ Y
Sbjct: 190 YAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVNFYG 249
Query: 178 KCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGS 237
CG +E A+ F R R +++ AMI + D++ LF+ M+ +G+K D +
Sbjct: 250 SCGDLEQAFRAFSR-HRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMA 308
Query: 238 ILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
+L A G L + IH + ++ + +LI++Y K GS+ A +++RSM D
Sbjct: 309 VLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRD 368
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
+IS +I+ + H EA L M L + D + L +CA +L GR IH
Sbjct: 369 VISWNTIIAAHGQHSQHP-EALHLLHLMQLDGVKADKISFVNALPLCATSEALAKGRMIH 427
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG-YG 416
++ + D + NA++DMY DA+R F M ++ +SW ++I YA
Sbjct: 428 SWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMITAYAAQPRLS 487
Query: 417 HEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSC 476
EA+ L+++M+ G +P+ ++F++ L AC+ EG +L D I + + +
Sbjct: 488 SEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEG-KLLHDRIRETGLESNMTVANA 546
Query: 477 VVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
V++++A+ G L A M +M + P W+ ++ A + +G+
Sbjct: 547 VLNMYAKSGTLVLARKMFGKMPL-PDVISWNGMISAFAQHGH 587
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/492 (27%), Positives = 240/492 (48%), Gaps = 25/492 (5%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y LL D ++ +HA I + + + ++ Y G ++ A+ FDRMP
Sbjct: 1 YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC-ARMRWLQGGR 151
++ ++W +I + Q G E AL +F +M GV + + L AC A L+ GR
Sbjct: 61 VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I G ++ + +V + LL +Y KC +EDA +F+ I K VV WNAMI A Q
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQD 180
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDL----IIKLGLES-- 265
++ + +F +M+ +G+K + T +L A S++ DL ++KL +E
Sbjct: 181 HHEQAIQVFYAMLLEGVKAERITFIGVLDAC---------SKLKDLEVAKLVKLCVEERE 231
Query: 266 -----SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFD 320
+ +L++ Y G + A++ + S + ++I TA+I+ + + + EA +
Sbjct: 232 HDHLHDSSFATALVNFYGSCGDLEQAFRAF-SRHRLELILATAMITQYTQRERWD-EALE 289
Query: 321 LFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYA 380
LFK M+L+ + +D + +LN C+ L GR IH F + + GNALI+MY
Sbjct: 290 LFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYG 349
Query: 381 KSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
K G + +A F M ++VISW ++IA + +H EA+ L M+ +G+ + ++F++
Sbjct: 350 KCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVN 409
Query: 441 LLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIK 500
L C+ + +G + I + I + ++D++ + A + R M ++
Sbjct: 410 ALPLCATSEALAKG-RMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVR 468
Query: 501 PTASLWSAILGA 512
S W+A++ A
Sbjct: 469 DQVS-WNAMITA 479
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 183/371 (49%), Gaps = 11/371 (2%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD M++L C + + +IH + ++ +++ +I Y K G + A +
Sbjct: 301 LDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEV 360
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F M R+V+SW +I+ + Q+ AL + M GV+A++ ++ +AL CA L
Sbjct: 361 FRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEAL 420
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
GRMI I + ++ + +A+LD+Y C +DA +F ++ +D VSWNAMI
Sbjct: 421 AKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMITAY 480
Query: 208 AMQG-FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
A Q + ++ LF+ M G PD + + L A L + +HD I + GLES+
Sbjct: 481 AAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESN 540
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ +++++YAK G++ A +++ M D+IS +IS FA+ H+ + F+ M
Sbjct: 541 MTVANAVLNMYAKSGTLVLARKMFGKMPLPDVISWNGMISAFAQ-HGHADQVLRFFRRMN 599
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQ-----IHAFAFKYQSSYDAAVGNALIDMYAK 381
+ +DV +++ C++ + G Q +H F S A ++D+ A+
Sbjct: 600 HEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFP---TISPRAEHYYCMVDLIAR 656
Query: 382 SGEIADANRAF 392
+G++ DA F
Sbjct: 657 AGKL-DAAEKF 666
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 177/557 (31%), Positives = 298/557 (53%), Gaps = 27/557 (4%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD SLL+ C + +H NG+ S++ + ++ Y K G ++SAR
Sbjct: 86 LDNFILPSLLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLV 145
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD+MPER+VVSWT M+ Y ++ AL + M GV+ + S + + +
Sbjct: 146 FDQMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDM 205
Query: 148 QGGRMIQGSIQKGRFVENLFVK--SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
+ GR + G I + E + V +AL+D+Y K G + A LF+R+ ++ VVSW MI
Sbjct: 206 KSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIA 265
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS--VGGIELMKISQIHDLIIKLGL 263
G D+ F M+ + + P+ TL S++ VG ++L K H +++ G
Sbjct: 266 GCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGK--WFHAYLLRNGF 323
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
S L +LID+Y K G + A L+ + K D+ + LIS +A + F+LF
Sbjct: 324 GMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSC-MDQVFNLFV 382
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
+M+ + ++V + +L++CA +L+LG+ HA+ ++ D + ALI+MYAK G
Sbjct: 383 EMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCG 442
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
++ A F+E +++ W +++AG++ HG G EA+EL+ +M+ G+ PND+TF+S+
Sbjct: 443 DVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFH 502
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
ACSH+GL EH+ C+VDL R G L+ A+N+I M ++P
Sbjct: 503 ACSHSGLM--------------------EHYGCLVDLLGRAGHLDEAHNIIENMPMRPNT 542
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
+W A+L AC ++ N +LGE+AAR + +++P+ V+ SNIY +A W++ R+ M
Sbjct: 543 IIWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWNDVTSVREAM 602
Query: 564 EERSLRKNPGYSFLQSS 580
++K PG S+++ S
Sbjct: 603 SHSGMKKEPGLSWIEVS 619
>gi|297605857|ref|NP_001057684.2| Os06g0493800 [Oryza sativa Japonica Group]
gi|255677066|dbj|BAF19598.2| Os06g0493800 [Oryza sativa Japonica Group]
Length = 721
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 179/553 (32%), Positives = 301/553 (54%), Gaps = 9/553 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T +L+ C K +HA + G + + ++ ++ YAK G V S+ +AF
Sbjct: 107 TVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRAFVLT 166
Query: 92 PERNVVSWTAMIS---GYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
P+R+V+SWT+MI+ + +GY + A+++F ML V T+S L+ L
Sbjct: 167 PQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSCILKVFDVPELLP 226
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ + G + K + + +ALL +Y +CG +++ L RI R D S +++ A
Sbjct: 227 SGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMDEITRLACRI-RHDAFSRTSLLTAYA 285
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G N ++ +FR M+ M D + S+L+ +L + +IH +K
Sbjct: 286 RNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTL 345
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
L +++ VY K G I S+ ++ ++ D IS TAL++ + ++D S+EA F++M+ K
Sbjct: 346 LLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTALLTCYVQND-LSQEALFFFREMVRK 404
Query: 329 KMGIDDVILCL--MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
G++ I C+ +L C+ +SL+ G QIH+ K D +V NAL+ MYAK G +
Sbjct: 405 --GLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQ 462
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A + F+ M ++ +ISW +LI +++HG AI+L+ M+ E + P+D TF+ LL +CS
Sbjct: 463 VALKIFNSMRNRGIISWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCS 522
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
GL EG E F M KY + P+ EH++C+VDLFAR G+ A I M +P +W
Sbjct: 523 RMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQLVW 582
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
A+L +C ++GN LG +AA+ + +++PE Y++LS+I+ + WD + R L++ +
Sbjct: 583 EALLASCRVHGNLDLGRMAAKKILEIKPEDPSPYIILSSIHASIDMWDEKARNRTLLDFQ 642
Query: 567 SLRKNPGYSFLQS 579
LRK+ G S L S
Sbjct: 643 QLRKDVGSSQLDS 655
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 146/505 (28%), Positives = 261/505 (51%), Gaps = 17/505 (3%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H + G ++ +L +++ Y G + AR FD MP RNVVSW+ +I+ ++ G
Sbjct: 24 VHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRLGV 83
Query: 112 DENALLVFSAMLRSGV--RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK 169
+AL +F+ MLR G R N FT ++ + CAR + G + S K E+ V
Sbjct: 84 LGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVA 143
Query: 170 SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ---GFNDDSFWLFRSMMRQ 226
L+D+YAKCG + +W F ++ V+SW +MI L G+ D + LF+ M+
Sbjct: 144 GTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLVL 203
Query: 227 GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSA 286
+ P T IL+ L Q+H ++K+G E L +L+ +Y + G +
Sbjct: 204 KVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMDEI 263
Query: 287 YQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICAN 346
+L ++ D S T+L++ +AR + + EA +F+DM++ M ID + +L +C++
Sbjct: 264 TRLA-CRIRHDAFSRTSLLTAYAR-NGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSS 321
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
+ L + ++IH +A K D + NA++ +Y K G+IA + F+ + +K+ ISWT+L
Sbjct: 322 LGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTAL 381
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYR 466
+ Y ++ EA+ +++M +G+ + S+L ACS T GW++ + ++ K
Sbjct: 382 LTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVV-KLG 440
Query: 467 ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAA 526
+ + +V ++A+ G ++ A + M + S W+A++ + S +GN E+AA
Sbjct: 441 VDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIIS-WNALITSFSQHGN----EVAA 495
Query: 527 RNLFDMEPEKSVNYVVLSNIYTAAG 551
LFDM E+ +V + YT G
Sbjct: 496 IQLFDMMQEE----MVCPDDYTFVG 516
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 130/267 (48%), Gaps = 1/267 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D S SLLQ C R IH + + N + + L ++ Y K GD+ S+
Sbjct: 307 IDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIV 366
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F+ + ++ +SWTA+++ Y QN + AL F M+R G+ ++ F +S LRAC+ L
Sbjct: 367 FNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSL 426
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G I + K ++ V++AL+ +YAKCG ++ A +F + + ++SWNA+I
Sbjct: 427 SCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIISWNALITSF 486
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESS 266
+ G + LF M + + PD +T +L + S G+ + K LE
Sbjct: 487 SQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEPK 546
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ ++D++A+ G A + +M
Sbjct: 547 MEHYTCMVDLFARAGRFSDAMKFIDAM 573
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 176/364 (48%), Gaps = 7/364 (1%)
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
R + G+ K + + ++ + LL Y G + DA +F+ + R++VVSW+ +I +
Sbjct: 22 RAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRL 81
Query: 211 GFNDDSFWLFRSMMRQGM--KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G D+ LF M+R G +P+ FT+ +++ + + Q+H +KLG++
Sbjct: 82 GVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDES 141
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR--DDNHSKEAFDLFKDMI 326
+ G+L+D+YAK G + S+++ + + ++S T++I+ D + A LFK M+
Sbjct: 142 VAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKML 201
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ K+ + +L + L G+Q+H K + D A+G AL+ MY + G +
Sbjct: 202 VLKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMD 261
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
+ R + + S TSL+ YA++G EA+ +++ M M + SLL CS
Sbjct: 262 EITRLACRI-RHDAFSRTSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCS 320
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
G E+ + + L + +V ++ + G + S+ + + K T S W
Sbjct: 321 SLGQLRVVKEIHCYALKNFFRLDTLL-LNAIVTVYGKCGDIASSEIVFNTLENKDTIS-W 378
Query: 507 SAIL 510
+A+L
Sbjct: 379 TALL 382
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 8/170 (4%)
Query: 354 RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKH 413
R +H A K + N L+ Y G +ADA FDEM +NV+SW+ LIA ++
Sbjct: 22 RAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRL 81
Query: 414 GYGHEAIELYKKMKHEGM--VPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
G +A+ L+ M G PN T +L+ C+ G ++ + K +
Sbjct: 82 GVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAV-KLGVDEDE 140
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL--WSAILGACSIYGNT 519
+VD++A+ G++ S++ R + P S+ W++++ +G++
Sbjct: 141 SVAGTLVDMYAKCGRVGSSW---RAFVLTPQRSVLSWTSMIACLVNHGDS 187
>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
Length = 781
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 166/551 (30%), Positives = 295/551 (53%), Gaps = 2/551 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ +++ C + H +I G E +++ ++ FYAK+G V A + F
Sbjct: 106 DRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVF 165
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS-GVRANQFTYSSALRACARMRWL 147
D MP R++V+W M+ GY NG AL F M + V+ + +AL AC
Sbjct: 166 DGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSS 225
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ I G + + +++ V ++LLD+Y KCG + A +F + + VV+WN MIGG
Sbjct: 226 MQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGY 285
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A+ D++F F M +G++ + T ++L A + +H +++
Sbjct: 286 ALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHV 345
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
L +L+++Y K G + S+ +++ + ++S +I+ + + ++ EA LF +++
Sbjct: 346 VLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYT-EAITLFLELLN 404
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ + D + ++ + SL RQIH++ + + + NA++ MYA+SG++
Sbjct: 405 QPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVA 464
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
+ FD+M K+VISW ++I GYA HG G A+E++ +MK+ G+ PN+ TF+S+L ACS
Sbjct: 465 SREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSV 524
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
+GL EGW F M+ +Y ++P+ EH+ C+ DL R G L I M I PT+ +W
Sbjct: 525 SGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWG 584
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
++L A + + E AA +F +E + + Y+VLS++Y AG W++ + R LM+E+
Sbjct: 585 SLLTASRNQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKG 644
Query: 568 LRKNPGYSFLQ 578
LR+ S ++
Sbjct: 645 LRRTEPISLVE 655
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 121/489 (24%), Positives = 226/489 (46%), Gaps = 45/489 (9%)
Query: 68 STKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV 127
S +++ A G + A +A + + MI G+A G AL + ML G
Sbjct: 44 SKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGA 103
Query: 128 RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWI 187
R ++FT+ ++ CAR+ L GR G + K +++ ++L+ YAK G +EDA
Sbjct: 104 RPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAER 163
Query: 188 LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ-GMKPDCFTLGSILRASVGGI 246
+F+ + +D+V+WN M+ G G + F+ M ++ D + + L A
Sbjct: 164 VFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEF 223
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
M+ +IH +I+ GLE K+ SL+D+Y K G + A ++ +M +++ +I
Sbjct: 224 SSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIG 283
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
G+A ++ EAFD F M + + ++ V +L CA S GR +H + + Q
Sbjct: 284 GYALNER-PDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFL 342
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
+ AL++MY K G++ + + F ++ +K ++SW ++IA Y EAI L+ ++
Sbjct: 343 PHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLEL 402
Query: 427 KHEGMVPNDVTFLSLLFA---------C--------------------------SHTGLT 451
++ + P+ T +++ A C + +G
Sbjct: 403 LNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDV 462
Query: 452 CEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMN---IKPTASLWSA 508
E+F M++K I ++ ++ +A GQ ++A M +M ++P S + +
Sbjct: 463 VASREIFDKMVSKDVI-----SWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVS 517
Query: 509 ILGACSIYG 517
+L ACS+ G
Sbjct: 518 VLTACSVSG 526
>gi|297834550|ref|XP_002885157.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330997|gb|EFH61416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 655
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 185/584 (31%), Positives = 316/584 (54%), Gaps = 12/584 (2%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNG 60
++RA G ++AL ++ + P+ TY +L+ C +A LIH+H+ +
Sbjct: 74 MIRAYVSNGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGLRAIEDGKLIHSHVKCSN 133
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+ +++++ T ++ FYAK G++ A K FD MP+R++V+W AMISG++ + + + +F
Sbjct: 134 FAADMYVCTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMISGFSLHCCLTDVIGLFL 193
Query: 121 AMLRSG-VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
M RS + N T A R L+ G+ + G + F +L VK+ +LD+YAK
Sbjct: 194 DMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKS 253
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG----MKPDCFTL 235
I A +F+ +K+ V+W+AMIGG ++ +F M+ + P +
Sbjct: 254 KCIIYARRVFDSDFKKNEVTWSAMIGGYVENEMIKEAGEVFLQMLVNADMAMVTP--VAI 311
Query: 236 GSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLK 295
G IL +L +H IK G + ++I YAKYGS+ A++ + +
Sbjct: 312 GLILMGCARFGDLSGGRCVHCYAIKAGFILDLTVGNTVISFYAKYGSLCDAFRQFTEIGL 371
Query: 296 TDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQ 355
DI+S +LISG ++ ++E+F LF M + D L +L C+N+A+L G
Sbjct: 372 KDIVSYNSLISGCV-ENCRAEESFRLFHQMKSSGIRPDITTLLGILTACSNLAALGHGSS 430
Query: 356 IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGY 415
H + + + ++ NAL+DMY K G++ A R FD M ++++SW +++ G+ HG
Sbjct: 431 CHGYCVVNGYAVNTSICNALMDMYTKCGKLYVAKRVFDTMHKRDIVSWNTMLFGFGIHGL 490
Query: 416 GHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI-NKYRILPRAEHF 474
G EA+ L+ M+ G+ P++VT L++L ACSH+GL EG +LF M + ++PR +H+
Sbjct: 491 GKEALSLFNSMQDTGVHPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRLDHY 550
Query: 475 SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEP 534
+C+ DL AR G L+ AY+ + +M +P + +L AC Y N LG ++ + +
Sbjct: 551 NCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNVELGNEVSKKMQSL-G 609
Query: 535 EKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
E + + V+LSN Y+AA W++A K R ++ L K PGYS++
Sbjct: 610 ETTESLVLLSNTYSAAERWEDAAKIRMTQKKSGLLKTPGYSWVD 653
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 151/500 (30%), Positives = 263/500 (52%), Gaps = 27/500 (5%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVII-----FYAKVGDVLSARKA 87
++ LL+ CI + +IH H++ + +L LS+ ++ YA +V AR
Sbjct: 2 FLRLLESCIRSRNLILGQIIHQHLL----KRSLTLSSSTVLVNLTRLYASCNEVELARHV 57
Query: 88 FDRMPER--NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
FD +P N ++W MI Y NG+ E AL ++ ML SGVR +FTY L+ACA +R
Sbjct: 58 FDEIPHPRINPIAWDLMIRAYVSNGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGLR 117
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
++ G++I ++ F +++V +AL+D YAKCG ++ A +F+ + ++D+V+WNAMI
Sbjct: 118 AIEDGKLIHSHVKCSNFAADMYVCTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMIS 177
Query: 206 GLAMQGFNDDSFWLFRSMMRQG-MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G ++ D LF M R + P+ T+ + A L + +H ++G
Sbjct: 178 GFSLHCCLTDVIGLFLDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFS 237
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ + ++DVYAK I A +++ S K + ++ +A+I G+ ++ KEA ++F
Sbjct: 238 NDLVVKTGILDVYAKSKCIIYARRVFDSDFKKNEVTWSAMIGGYVENE-MIKEAGEVFLQ 296
Query: 325 MILKK--MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
M++ + V + L+L CA L+ GR +H +A K D VGN +I YAK
Sbjct: 297 MLVNADMAMVTPVAIGLILMGCARFGDLSGGRCVHCYAIKAGFILDLTVGNTVISFYAKY 356
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
G + DA R F E+G K+++S+ SLI+G ++ E+ L+ +MK G+ P+ T L +L
Sbjct: 357 GSLCDAFRQFTEIGLKDIVSYNSLISGCVENCRAEESFRLFHQMKSSGIRPDITTLLGIL 416
Query: 443 FACSHT-----GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
ACS+ G +C G+ + +N Y + + ++D++ + G+L A + M
Sbjct: 417 TACSNLAALGHGSSCHGYCV----VNGYAV--NTSICNALMDMYTKCGKLYVAKRVFDTM 470
Query: 498 NIKPTASLWSAILGACSIYG 517
+ + S W+ +L I+G
Sbjct: 471 HKRDIVS-WNTMLFGFGIHG 489
>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 169/498 (33%), Positives = 278/498 (55%), Gaps = 14/498 (2%)
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D E NV ++ A+ISG+ NG+ E + M GV ++FT+ A++AC + +
Sbjct: 17 DPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEI- 75
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
+ I G + K ++F+ SAL++ Y K G +E A + FE + +DVV WNAM+ G A
Sbjct: 76 --KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYA 133
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLESS 266
G + FR M + + P FT+ IL A +G + +I IH +K+G +S
Sbjct: 134 QIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGRI--IHGFAMKMGYDSG 191
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
++ SLID+Y K I A +++ M + DI S ++ S + +H L M+
Sbjct: 192 VAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCGDHDG-TLRLLDRML 250
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF------KYQSSYDAAVGNALIDMYA 380
+ D V + +L C+++A+L GR+IH + + D + NA+IDMYA
Sbjct: 251 GAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYA 310
Query: 381 KSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
K G + DA+ F+ M +K+V SW +I GY HGYG+EA+E++ +M + P++VTF+
Sbjct: 311 KCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVG 370
Query: 441 LLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIK 500
+L ACSH G +G M +KY + P EH++CV+D+ R GQL+ AY + M I+
Sbjct: 371 VLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIE 430
Query: 501 PTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTR 560
+W A+L AC ++ + L E+AA+ +F++EPE +YV++SN+Y A G ++ + R
Sbjct: 431 ANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVR 490
Query: 561 KLMEERSLRKNPGYSFLQ 578
M ++++RK PG S+++
Sbjct: 491 HTMRQQNVRKTPGCSWIE 508
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 199/401 (49%), Gaps = 18/401 (4%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
+ D T+ ++ C+D ++ IH + G E ++ + + ++ Y K G + A+
Sbjct: 55 VMPDKFTFPCAIKACLDVLEIKK---IHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQ 111
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
AF+ +P R+VV W AM++GYAQ G E L F M V ++FT + L A M
Sbjct: 112 VAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMG 171
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
L GR+I G K + + V ++L+D+Y KC IEDA +FE + KD+ SWN++
Sbjct: 172 DLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXS 231
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
G +D + L M+ G++PD T+ ++L A LM +IH +I GL
Sbjct: 232 VHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGK 291
Query: 266 SNK------LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
K L ++ID+YAK GS+R A+ ++ M D+ S +I G+ + EA
Sbjct: 292 DGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGM-HGYGNEAL 350
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG----NAL 375
++F M ++ D+V +L+ C++ ++ GR F + +S YD A +
Sbjct: 351 EMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRN---FLAQMKSKYDVAPTIEHYTCV 407
Query: 376 IDMYAKSGEIADANR-AFDEMGDKNVISWTSLIAGYAKHGY 415
IDM ++G++ +A A + N + W +L+A H +
Sbjct: 408 IDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKH 448
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 179/529 (33%), Positives = 296/529 (55%), Gaps = 35/529 (6%)
Query: 77 KVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLR------SGVRAN 130
++GD AR+ FD MPE++VVSW +++SGYAQNGY + A VF M +G+ A
Sbjct: 126 RLGD---ARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAA 182
Query: 131 QFTYSSALRAC----ARMRW-------LQGGRMIQGSIQKGRFV-ENLFVKSA-----LL 173
AC ++ W L GG + + + R++ + + V+ A ++
Sbjct: 183 YVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMI 242
Query: 174 DLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCF 233
YA+ G + A LF+ +DV +W AM+ G G D++ F M + +
Sbjct: 243 SGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK----NEV 298
Query: 234 TLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ +++ G ++ K+ +L + + + ++I Y + G I A + + M
Sbjct: 299 SYNAMI---AGYVQTKKMDIARELFESMPCRNISSWN-TMITGYGQIGDIAQARKFFDMM 354
Query: 294 LKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG 353
+ D +S A+I+G+A+ H +EA ++F ++ ++ L+ CA++A+L LG
Sbjct: 355 PQRDCVSWAAIIAGYAQS-GHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELG 413
Query: 354 RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKH 413
+QIH A K VGNAL+ MY K G I +AN F+ + +K+V+SW +++AGYA+H
Sbjct: 414 KQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARH 473
Query: 414 GYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEH 473
G+G +A+ +++ MK G+ P+++T + +L ACSHTGL G E F M Y ++P ++H
Sbjct: 474 GFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKH 533
Query: 474 FSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDME 533
++C++DL R G+LE A ++IR M +P A+ W A+LGA I+GNT LGE AA +F ME
Sbjct: 534 YTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKME 593
Query: 534 PEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
P+ S YV+LSN+Y A+G W +A K R M + ++K PGYS+++ K
Sbjct: 594 PQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNK 642
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 179/384 (46%), Gaps = 48/384 (12%)
Query: 90 RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG 149
R+ + +++ W IS + +NG+ ++AL VF+ M R + +Y++ + R
Sbjct: 43 RVKDPDILKWNKAISTHMRNGHCDSALHVFNTM----PRRSSVSYNAMISGYLRNSKFNL 98
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
R + + + +LF + +L Y + + DA LF+ + KDVVSWN+++ G A
Sbjct: 99 ARNLFDQMPE----RDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQ 154
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV--GGIE----LMKISQIHDLI----I 259
G+ D++ +F +M + + + +L A V G IE L + DLI +
Sbjct: 155 NGYVDEAREVFDNMPEK----NSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCL 210
Query: 260 KLGLESSNKLT-----------------GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCT 302
G KL ++I YA+ G + A +L+ D+ + T
Sbjct: 211 MGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWT 270
Query: 303 ALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK 362
A++SG+ + + EA F +M K ++V M+ +++ R++ F+
Sbjct: 271 AMVSGYVQ-NGMLDEAKTFFDEMPEK----NEVSYNAMIAGYVQTKKMDIAREL----FE 321
Query: 363 YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIEL 422
+ + N +I Y + G+IA A + FD M ++ +SW ++IAGYA+ G+ EA+ +
Sbjct: 322 SMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNM 381
Query: 423 YKKMKHEGMVPNDVTFLSLLFACS 446
+ ++K +G N TF L C+
Sbjct: 382 FVEIKQDGESLNRATFGCALSTCA 405
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 4/213 (1%)
Query: 3 IVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
I+ ++G ++AL + L+ +T+ L C D A IH + G
Sbjct: 365 IIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMG 424
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
Y + + ++ Y K G + A F+ + E++VVSW M++GYA++G+ AL VF
Sbjct: 425 YGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFE 484
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGR-FVENLFVKSALLDLYAKC 179
+M +GV+ ++ T L AC+ L G S+ K + + ++DL +
Sbjct: 485 SMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRA 544
Query: 180 GWIEDAWILFERIE-RKDVVSWNAMIGGLAMQG 211
G +E+A L + + SW A++G + G
Sbjct: 545 GRLEEAQDLIRNMPFQPGAASWGALLGASRIHG 577
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 17/97 (17%)
Query: 441 LLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIK 500
L +TGL G E F M +Y + P ++H++C++DL R +LE
Sbjct: 770 FLLVVIYTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEG---------- 819
Query: 501 PTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKS 537
A+LGA I+GNT LGE AA+ F M P+ S
Sbjct: 820 -------ALLGASRIHGNTELGEKAAQMFFKMGPQNS 849
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 98/232 (42%), Gaps = 56/232 (24%)
Query: 373 NALIDMYAKSGEIADANRAFDEMGDK-------------------------------NVI 401
NA+I Y ++ + A FD+M ++ +V+
Sbjct: 84 NAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVV 143
Query: 402 SWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFT-- 459
SW SL++GYA++GY EA E++ M + N +++ LL A H G E LF
Sbjct: 144 SWNSLLSGYAQNGYVDEAREVFDNMPEK----NSISWNGLLAAYVHNGRIEEACLLFESK 199
Query: 460 ---DMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIY 516
D+I+ ++C++ F R+ +L A + +M ++ S W+ ++ +
Sbjct: 200 SDWDLIS----------WNCLMGGFVRKKKLGDARWLFDKMPVRDAIS-WNTMISGYAQG 248
Query: 517 GNTSLGELAARNLFDMEPEKSV-NYVVLSNIYTAAGAWDNARKTRKLMEERS 567
G S AR LFD P + V + + + Y G D A+ M E++
Sbjct: 249 GGLS----QARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKN 296
>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
Length = 704
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 161/450 (35%), Positives = 264/450 (58%), Gaps = 1/450 (0%)
Query: 133 TYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI 192
TY + + AC ++ ++G + + + + ++++ +L ++ KCG + DA LF+ +
Sbjct: 133 TYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEM 192
Query: 193 ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS 252
K+++SWN +IGGL G ++F LF M + +++RAS G +
Sbjct: 193 PEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGLGLIFAGR 252
Query: 253 QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDD 312
Q+H +K G+ + +LID+Y+K GSI A ++ M + + ++I+G+A
Sbjct: 253 QLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALH- 311
Query: 313 NHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG 372
+S+EA ++ +M + ID+ +++ ICA +ASL +Q HA ++ D
Sbjct: 312 GYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVAN 371
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
AL+D+Y+K G I DA FD M KNVISW +LIAGY HG G EA+E++++M HEGMV
Sbjct: 372 TALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMV 431
Query: 433 PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYN 492
PN VTFL++L ACS++GL+ GWE+F M ++I PRA H++C+++L R G L+ A+
Sbjct: 432 PNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFA 491
Query: 493 MIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGA 552
+I+ KPT ++W+A+L AC ++ N LG+ AA L+ M PEK NYVVL NIY +G
Sbjct: 492 LIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNXSGR 551
Query: 553 WDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+ A + ++ R LR P S+++ K+
Sbjct: 552 LEEAAAVIQTLKRRGLRMLPACSWIEIKKQ 581
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 170/320 (53%), Gaps = 5/320 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D TY +L+ CI K+ R + ++I +G + + +L +V++ + K G ++ AR+
Sbjct: 129 MDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRL 188
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD MPE+N++SW +I G G A +F M + A + + +RA A + +
Sbjct: 189 FDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGLGLI 248
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
GR + K ++FV AL+D+Y+KCG IEDA +F+++ K V WN++I G
Sbjct: 249 FAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGY 308
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A+ G+++++ ++ M G+K D FT I+R L Q H +++ G
Sbjct: 309 ALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDI 368
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSK--EAFDLFKDM 325
+L+D+Y+K+G I A ++ M ++IS ALI+G+ NH + EA ++F+ M
Sbjct: 369 VANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYG---NHGRGVEAVEMFERM 425
Query: 326 ILKKMGIDDVILCLMLNICA 345
+ + M + V +L+ C+
Sbjct: 426 LHEGMVPNHVTFLAVLSACS 445
>gi|147804706|emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
Length = 629
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 168/498 (33%), Positives = 278/498 (55%), Gaps = 14/498 (2%)
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D E NV ++ A+ISG+ NG+ E + M GV ++FT+ A++AC + +
Sbjct: 97 DPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEI- 155
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
+ I G + K ++F+ SAL++ Y K G +E A + FE + +DVV WNAM+ G A
Sbjct: 156 --KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYA 213
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLESS 266
G + FR M + + P FT+ L A +G + +I IH +K+G +S
Sbjct: 214 QIGQFEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRI--IHGFAMKMGYDSG 271
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
++ SLID+Y K I A +++ M + DI S +++S + +H L M+
Sbjct: 272 VAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDG-TLRLLDRML 330
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF------KYQSSYDAAVGNALIDMYA 380
+ D V + +L C+++A+L GR+IH + + D + NA+IDMYA
Sbjct: 331 GAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYA 390
Query: 381 KSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLS 440
K G + DA+ F+ M +K+V SW +I GY HGYG+EA+E++ +M + P++VTF+
Sbjct: 391 KCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVG 450
Query: 441 LLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIK 500
+L ACSH G +G M +KY + P EH++CV+D+ R GQL+ AY + M I+
Sbjct: 451 VLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIE 510
Query: 501 PTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTR 560
+W A+L AC ++ + L E+AA+ +F++EPE +YV++SN+Y A G ++ + R
Sbjct: 511 ANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVR 570
Query: 561 KLMEERSLRKNPGYSFLQ 578
M ++++RK PG S+++
Sbjct: 571 HTMRQQNVRKTPGCSWIE 588
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 200/401 (49%), Gaps = 18/401 (4%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
+ D T+ ++ C+D ++ IH + G E ++ + + ++ Y K G + A+
Sbjct: 135 VMPDKFTFPCAIKACLDVLEIKK---IHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQ 191
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
AF+ +P R+VV W AM++GYAQ G E L F M V ++FT + L A M
Sbjct: 192 VAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMG 251
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
L GR+I G K + + V ++L+D+Y KC IEDA +FE + KD+ SWN+++
Sbjct: 252 DLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVS 311
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
G +D + L M+ G++PD T+ ++L A LM +IH +I GL
Sbjct: 312 VHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGK 371
Query: 266 SNK------LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
K L ++ID+YAK GS+R A+ ++ M D+ S +I G+ + EA
Sbjct: 372 DGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGM-HGYGNEAL 430
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG----NAL 375
++F M ++ D+V +L+ C++ ++ GR F + +S YD A +
Sbjct: 431 EMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRN---FLVQMKSKYDVAPTIEHYTCV 487
Query: 376 IDMYAKSGEIADANR-AFDEMGDKNVISWTSLIAGYAKHGY 415
IDM ++G++ +A A + N + W +L+A H +
Sbjct: 488 IDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKH 528
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 180/605 (29%), Positives = 292/605 (48%), Gaps = 71/605 (11%)
Query: 53 HAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYD 112
HA I+ +G +++ ++S K+I Y+ A +P+ V S++++I +
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKLF 97
Query: 113 ENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSAL 172
++ VFS M G+ + + + CA + + G+ I + FV+ +L
Sbjct: 98 SQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSL 157
Query: 173 LDLYAKCGWIEDAWILFERIERKDVV---------------------------------- 198
+Y +CG + DA +F+R+ KDVV
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNI 217
Query: 199 -SWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS-QIHD 256
SWN ++ G G++ ++ +F+ M G PD T+ S+L SVG E + + QIH
Sbjct: 218 VSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVL-PSVGDSENLNMGRQIHG 276
Query: 257 LIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD----- 311
+IK GL + +++D+Y K G + +L+ + C A I+G +R+
Sbjct: 277 YVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDK 336
Query: 312 -----------------------------DNHSKEAFDLFKDMILKKMGIDDVILCLMLN 342
+ EA +LF++M + + + V + ML
Sbjct: 337 ALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLP 396
Query: 343 ICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVIS 402
C N+A+L GR H FA + D VG+ALIDMYAK G I + F+ M KN++
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVC 456
Query: 403 WTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI 462
W SL+ GY+ HG E + +++ + + P+ ++F SLL AC GLT EGW+ F M
Sbjct: 457 WNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMS 516
Query: 463 NKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLG 522
+Y I PR EH+SC+V+L R G+L+ AY++I+++ +P + +W A+L +C + N L
Sbjct: 517 EEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVDLA 576
Query: 523 ELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
E+AA+ LF +EPE YV++SNIY A G W R ME L+KNPG S++Q K
Sbjct: 577 EIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNK 636
Query: 583 NILLL 587
LL
Sbjct: 637 VYTLL 641
>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Vitis vinifera]
Length = 704
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 161/450 (35%), Positives = 264/450 (58%), Gaps = 1/450 (0%)
Query: 133 TYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI 192
TY + + AC ++ ++G + + + + ++++ +L ++ KCG + DA LF+ +
Sbjct: 133 TYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEM 192
Query: 193 ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS 252
K+++SWN +IGGL G ++F LF M + +++RAS G +
Sbjct: 193 PEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLIFAGR 252
Query: 253 QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDD 312
Q+H +K G+ + +LID+Y+K GSI A ++ M + + ++I+G+A
Sbjct: 253 QLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALH- 311
Query: 313 NHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG 372
+S+EA ++ +M + ID+ +++ ICA +ASL +Q HA ++ D
Sbjct: 312 GYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVAN 371
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
AL+D+Y+K G I DA FD M KNVISW +LIAGY HG G EA+E++++M HEGMV
Sbjct: 372 TALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMV 431
Query: 433 PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYN 492
PN VTFL++L ACS++GL+ GWE+F M ++I PRA H++C+++L R G L+ A+
Sbjct: 432 PNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFA 491
Query: 493 MIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGA 552
+I+ KPT ++W+A+L AC ++ N LG+ AA L+ M PEK NYVVL NIY +G
Sbjct: 492 LIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNRSGR 551
Query: 553 WDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+ A + ++ R LR P S+++ K+
Sbjct: 552 LEEAAAVIQTLKRRGLRMLPACSWIEIKKQ 581
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 170/320 (53%), Gaps = 5/320 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D TY +L+ CI K+ R + ++I +G + + +L +V++ + K G ++ AR+
Sbjct: 129 MDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRL 188
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD MPE+N++SW +I G G A +F M + A + + +RA A + +
Sbjct: 189 FDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLI 248
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
GR + K ++FV AL+D+Y+KCG IEDA +F+++ K V WN++I G
Sbjct: 249 FAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGY 308
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A+ G+++++ ++ M G+K D FT I+R L Q H +++ G
Sbjct: 309 ALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDI 368
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSK--EAFDLFKDM 325
+L+D+Y+K+G I A ++ M ++IS ALI+G+ NH + EA ++F+ M
Sbjct: 369 VANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYG---NHGRGVEAVEMFERM 425
Query: 326 ILKKMGIDDVILCLMLNICA 345
+ + M + V +L+ C+
Sbjct: 426 LHEGMVPNHVTFLAVLSACS 445
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 175/542 (32%), Positives = 302/542 (55%), Gaps = 15/542 (2%)
Query: 44 KAERQAHLIHAHIITNGYESNLHLSTKVIIFYAK-VGDVLSARKAFDRMPERNV----VS 98
K R IHAH+I +G + + +KV F+ K +G V AFD + + ++ +
Sbjct: 16 KTIRSLKQIHAHLIASGLLHDEFVLSKVSEFFGKHIGFV---DYAFDFLNQTDLHVGTLP 72
Query: 99 WTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQ 158
+ +I+ YA + + A LV+ ++ +G + +T+ L+AC + +Q G + G
Sbjct: 73 YNTLIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHGVAV 132
Query: 159 KGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFW 218
K F+ +L+V+++LL Y+ CG A +F+ + +DVVSW +I G G D++
Sbjct: 133 KMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAIN 192
Query: 219 LFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKLTGSLIDVY 277
LF ++ + P+ T S+L A G + + + + +H L+ K + +L+D+Y
Sbjct: 193 LF---LKMDVVPNVATFVSVLVAC-GRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMY 248
Query: 278 AKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVIL 337
K + A +L+ + DI+S T++ISG + K++ +LF DM + + D +IL
Sbjct: 249 VKCECLCEARKLFDELPDRDIVSWTSIISGLVQC-KQPKDSLELFYDMQISGVEPDRIIL 307
Query: 338 CLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD 397
+L+ CA++ +L+ GR + + + +D +G AL+DMYAK G I A F+ + +
Sbjct: 308 TSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPN 367
Query: 398 KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWEL 457
+N+ +W +L+ G A HG+GHEA++ ++ M G+ PN+VTFL++L AC H+GL EG
Sbjct: 368 RNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVAEGRSY 427
Query: 458 FTDMINK-YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIY 516
F MI++ + PR EH+ C++DL R G L+ AY IR M + P +W A+L AC
Sbjct: 428 FYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALLSACKAN 487
Query: 517 GNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSF 576
GN L + +L +++ + S YV+LSNIY WD+ + R+LM+++ +RK PG S
Sbjct: 488 GNVELSQEILSHLLELKSQDSGVYVLLSNIYATNERWDDVTRVRRLMKDKGIRKFPGSSV 547
Query: 577 LQ 578
++
Sbjct: 548 IE 549
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 195/393 (49%), Gaps = 15/393 (3%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ +L+ C ++ +H + G+ +L++ ++ FY+ G A + F
Sbjct: 104 DMYTFPVVLKACTKFLGVQEGEQVHGVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVF 163
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D M R+VVSWT +ISGY + G + A+ +F L+ V N T+ S L AC RM +L
Sbjct: 164 DEMLVRDVVSWTGLISGYVRTGLFDEAINLF---LKMDVVPNVATFVSVLVACGRMGYLS 220
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ + G + K F L V +AL+D+Y KC + +A LF+ + +D+VSW ++I GL
Sbjct: 221 MGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLV 280
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLESS 266
DS LF M G++PD L S+L AS+G ++ + Q + I + G+E
Sbjct: 281 QCKQPKDSLELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQ--EYIERQGIEWD 338
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ +L+D+YAK G I A ++ + +I + AL+ G A H EA F+ MI
Sbjct: 339 IHIGTALVDMYAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAM-HGHGHEALKHFELMI 397
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGR----QIHAFAFKYQSSYDAAVGNALIDMYAKS 382
+ ++V +L C + + GR Q+ + F + + +ID+ ++
Sbjct: 398 GAGIRPNEVTFLAILTACCHSGLVAEGRSYFYQMISQPFNFSPRLEHY--GCMIDLLCRA 455
Query: 383 GEIADANRAFDEMG-DKNVISWTSLIAGYAKHG 414
G + +A + M +V+ W +L++ +G
Sbjct: 456 GLLDEAYKFIRNMPLPPDVLIWGALLSACKANG 488
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 161/314 (51%), Gaps = 4/314 (1%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYE 62
++ +TG +A+ L D + + +T++S+L C +H + +
Sbjct: 177 LISGYVRTGLFDEAINLFLKM-DVVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFG 235
Query: 63 SNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAM 122
L + ++ Y K + ARK FD +P+R++VSWT++ISG Q +++L +F M
Sbjct: 236 IGLVVGNALVDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDM 295
Query: 123 LRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWI 182
SGV ++ +S L ACA + L GR +Q I++ ++ + +AL+D+YAKCG I
Sbjct: 296 QISGVEPDRIILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCI 355
Query: 183 EDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS 242
E A +F I +++ +WNA++GGLAM G ++ F M+ G++P+ T +IL A
Sbjct: 356 EMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTAC 415
Query: 243 V-GGIELMKISQIHDLIIK-LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDII 299
G+ S + +I + + G +ID+ + G + AY+ R+M L D++
Sbjct: 416 CHSGLVAEGRSYFYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVL 475
Query: 300 SCTALISGFARDDN 313
AL+S + N
Sbjct: 476 IWGALLSACKANGN 489
>gi|302782567|ref|XP_002973057.1| hypothetical protein SELMODRAFT_98472 [Selaginella moellendorffii]
gi|300159658|gb|EFJ26278.1| hypothetical protein SELMODRAFT_98472 [Selaginella moellendorffii]
Length = 531
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 176/535 (32%), Positives = 294/535 (54%), Gaps = 35/535 (6%)
Query: 74 FYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFT 133
Y K G V ARK FD + R+ VSWT+MIS YA NG+ + AL ++ M G++ + T
Sbjct: 1 MYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSIT 60
Query: 134 YSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE 193
++SAL AC + L G+ I I +E+ FV SAL+++YA+CG + A FE+I+
Sbjct: 61 FTSALLACTK---LADGKAIHARIVSSN-MESDFVGSALINMYARCGDVSSARQAFEKIQ 116
Query: 194 RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD----------CFTLGSI----- 238
K VV W +++ G ++ L+ M +G+ D C +LG++
Sbjct: 117 NKHVVCWTSLMTAYVQTGHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKA 176
Query: 239 --LRASVGGIELMKI-SQIHDLIIKLG-----------LESSNKLTGSLIDVYAKYGSIR 284
LR S G + + + + + + K G L S+ + +L+ +YAK GS+
Sbjct: 177 IHLRVSECGFQSLVVHTALLTMYAKCGELDAARAVFNRLASNVAVQNALVTMYAKCGSLE 236
Query: 285 SAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNIC 344
A + + + D++S A+I +A+ +EA DL++ M + + D+V + L+ C
Sbjct: 237 LAKSAFEASGRKDLVSWNAMIGAYAQH-GLGREALDLYQTMTSQGVLPDEVTIASSLSAC 295
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDA-AVGNALIDMYAKSGEIADANRAFDEMGDKNVISW 403
A SL LGR+IH+ K QS + V AL++MY + G + A F++MG ++V+SW
Sbjct: 296 AISGSLQLGREIHSRVLKNQSFQSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSW 355
Query: 404 TSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMIN 463
T++ + YA+ G+ + ++LY +M G+ PN++TF S+L CSH GL G E F +M +
Sbjct: 356 TAMTSVYAQQGHADQVLDLYLEMVLHGIRPNEITFTSILVGCSHAGLLARGVECFLEMQS 415
Query: 464 KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGE 523
++ ++P EHF C+VDL R G+L A ++ M +P + W +LG+C + + +
Sbjct: 416 EHEVVPIREHFLCMVDLLGRSGRLRDAEALVESMPYQPDSVAWLTVLGSCKTHSDADTAK 475
Query: 524 LAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
AAR + +++PE + Y +LS+I+TAAG A + + M+E L+K PG S ++
Sbjct: 476 RAARRVKELDPENTSLYSLLSSIFTAAGLPQEALEVQLSMKEMGLKKPPGQSLIE 530
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 134/474 (28%), Positives = 238/474 (50%), Gaps = 50/474 (10%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS 83
PD++ T+ S L C K A+ +A IHA I+++ ES+ + + +I YA+ GDV S
Sbjct: 56 PDSI----TFTSALLACT-KLADGKA--IHARIVSSNMESDF-VGSALINMYARCGDVSS 107
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
AR+AF+++ ++VV WT++++ Y Q G+ AL ++ M GV A+ TY +AL ACA
Sbjct: 108 ARQAFEKIQNKHVVCWTSLMTAYVQTGHYREALDLYGRMDHEGVHADGVTYVTALGACAS 167
Query: 144 MRWLQGGRMIQGSIQK-----------------------------GRFVENLFVKSALLD 174
+ L+ G+ I + + R N+ V++AL+
Sbjct: 168 LGALKEGKAIHLRVSECGFQSLVVHTALLTMYAKCGELDAARAVFNRLASNVAVQNALVT 227
Query: 175 LYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFT 234
+YAKCG +E A FE RKD+VSWNAMIG A G ++ L+++M QG+ PD T
Sbjct: 228 MYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVT 287
Query: 235 LGSILRASVGGIELMKISQIHDLIIK-LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ S L A L +IH ++K +SS + +L+++Y + G + +A ++ M
Sbjct: 288 IASSLSACAISGSLQLGREIHSRVLKNQSFQSSLMVQTALVNMYGRCGRLETARSMFEDM 347
Query: 294 LKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG 353
+ D++S TA+ S +A+ H+ + DL+ +M+L + +++ +L C++ L
Sbjct: 348 GQRDVLSWTAMTSVYAQ-QGHADQVLDLYLEMVLHGIRPNEITFTSILVGCSHAGL--LA 404
Query: 354 RQIHAFAFKYQSSYDAAVGN----ALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIA 408
R + F + QS ++ ++D+ +SG + DA + M + ++W +++
Sbjct: 405 RGVECF-LEMQSEHEVVPIREHFLCMVDLLGRSGRLRDAEALVESMPYQPDSVAWLTVLG 463
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC-SHTGLTCEGWELFTDM 461
H A +++K + P + + SLL + + GL E E+ M
Sbjct: 464 SCKTHSDADTAKRAARRVKE--LDPENTSLYSLLSSIFTAAGLPQEALEVQLSM 515
>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 171/534 (32%), Positives = 293/534 (54%), Gaps = 6/534 (1%)
Query: 47 RQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGY 106
RQAH + + + G ++++ T ++ Y K G V K F MPERN +W+ M+SGY
Sbjct: 138 RQAHALVVKMSSFG---DIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGY 194
Query: 107 AQNGYDENALLVFSAMLRSGVRANQ--FTYSSALRACARMRWLQGGRMIQGSIQKGRFVE 164
A G E A+ VF+ LR + + +++ L + A ++ GR I K +
Sbjct: 195 ATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLG 254
Query: 165 NLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMM 224
+ + +AL+ +Y+KC + +A +F+ ++ ++W+AM+ G + G + ++ LF M
Sbjct: 255 FVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMF 314
Query: 225 RQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIR 284
G+KP +T+ +L A L + Q+H ++KLG E T +L+D+YAK G +
Sbjct: 315 SAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLA 374
Query: 285 SAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNIC 344
A + + + + D+ T+LISG+ ++ ++ +EA L++ M + +D + +L C
Sbjct: 375 DARKGFDCLQERDVALWTSLISGYVQNSDN-EEALILYRRMKTAGIIPNDPTMASVLKAC 433
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWT 404
+++A+L LG+Q+H K+ + +G+AL MY+K G + D N F +K+V+SW
Sbjct: 434 SSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWN 493
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK 464
++I+G + +G G EA+EL+++M EGM P+DVTF++++ ACSH G GW F M ++
Sbjct: 494 AMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQ 553
Query: 465 YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGEL 524
+ P+ +H++C+VDL +R GQL+ A I NI LW +L AC +G LG
Sbjct: 554 IGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVY 613
Query: 525 AARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
A L + +S YV LS IYTA G + + K M + K G S+++
Sbjct: 614 AGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIE 667
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 149/539 (27%), Positives = 268/539 (49%), Gaps = 28/539 (5%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQ---AHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVL 82
T L+P T +LL+ +R +H II G + + + ++ FYAK G +
Sbjct: 8 TELNPHT-STLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 83 SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLV---FSAMLRSGVRANQFTYSSALR 139
A F+ + ++VVSW ++I+GY+QNG ++ V F M + N +T + +
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 140 ACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS 199
A + ++ GR + K +++V ++L+ +Y K G +ED +F + ++ +
Sbjct: 127 AESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYT 186
Query: 200 WNAMIGGLAMQGFNDDSFWLFRSMMR---QGMKPDCFTLGSILRASVGGIELMKISQIHD 256
W+ M+ G A +G +++ +F +R +G D + ++L + I + QIH
Sbjct: 187 WSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSSLAATIYVGLGRQIHC 245
Query: 257 LIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSK 316
+ IK GL L+ +L+ +Y+K S+ A +++ S + I+ +A+++G+++ + S
Sbjct: 246 ITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQ-NGESL 304
Query: 317 EAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALI 376
EA LF M + + + +LN C+++ L G+Q+H+F K AL+
Sbjct: 305 EAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALV 364
Query: 377 DMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDV 436
DMYAK+G +ADA + FD + +++V WTSLI+GY ++ EA+ LY++MK G++PND
Sbjct: 365 DMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDP 424
Query: 437 TFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQ 496
T S+L ACS G ++ I K+ S + ++++ G LE + R+
Sbjct: 425 TMASVLKACSSLATLELGKQVHGHTI-KHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRR 483
Query: 497 MNIKPTASLWSAILGACSIYGNTSLGELAARNLFD------MEPEKSVNYVVLSNIYTA 549
K S W+A++ S G A LF+ MEP+ V NI +A
Sbjct: 484 TPNKDVVS-WNAMISGLSHNGQGD----EALELFEEMLAEGMEPDD----VTFVNIISA 533
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 149/268 (55%), Gaps = 3/268 (1%)
Query: 28 LDPSTY--MSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
+ PS Y + +L C D + +H+ ++ G+E +L +T ++ YAK G + AR
Sbjct: 318 IKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADAR 377
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
K FD + ER+V WT++ISGY QN +E AL+++ M +G+ N T +S L+AC+ +
Sbjct: 378 KGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLA 437
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
L+ G+ + G K F + + SAL +Y+KCG +ED ++F R KDVVSWNAMI
Sbjct: 438 TLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMIS 497
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLE 264
GL+ G D++ LF M+ +GM+PD T +I+ A S G + + ++GL+
Sbjct: 498 GLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLD 557
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRS 292
++D+ ++ G ++ A + S
Sbjct: 558 PKVDHYACMVDLLSRAGQLKEAKEFIES 585
>gi|357154550|ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 657
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 185/603 (30%), Positives = 307/603 (50%), Gaps = 51/603 (8%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKV----- 78
P ++ + LL+ C ++ + IHAH++ +G+ +++++I Y +
Sbjct: 4 PAAVVASRHVLELLRQC---RSIQHLDQIHAHLVVHGFSDVSSVASQLIASYCTLSAGDR 60
Query: 79 -GDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSA 137
G + AR+ FDR+PE + + ++ Y+ + + AL + +L+ G+ N+FT
Sbjct: 61 DGGLCHARRLFDRIPEPDRFMYNTLVRAYSNSDCPQEALRLHRGVLQRGILPNEFTLPFV 120
Query: 138 LRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDV 197
L+AC +R ++ G + K FV+ +FV +ALL +A G + D+ F + ++V
Sbjct: 121 LKACTTVRAVEHALAAHGVVVKLGFVQQIFVANALLHFHASAGSLRDSRRFFGEMADRNV 180
Query: 198 VSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA--SVGGIELMKISQIH 255
VSWN MIGG A G ++ LF M QG+ D FTL S+L A S G +E+ ++ H
Sbjct: 181 VSWNTMIGGYAQAGEVSEACALFGEMRHQGLLADVFTLVSLLFACSSEGNLEVGRLVHCH 240
Query: 256 DLIIKLGLESSNKLTGSLIDVY-------------------------------AKYGSIR 284
L+ G L +L+D+Y AK+GS+
Sbjct: 241 MLVS--GSRVDRILGNALLDMYGKCGDLWMAHRCFDMMPIKNVVTWTSMLCAQAKHGSVD 298
Query: 285 SAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI--DDVILCLMLN 342
+ + M + +I+S A+IS + + E DL+ M + +GI D+ L +L+
Sbjct: 299 AVRDWFEQMPERNIVSWNAMISCYVQC-GRLHETLDLYNRM--RSLGITPDEFTLAGVLS 355
Query: 343 ICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVIS 402
C L G+ IH + + + N+L+DMYA+ G++ A F EM +KNVIS
Sbjct: 356 ACGQNGDLASGKMIHCYVRDNFNDPGVTLLNSLLDMYARCGQVDTAIGLFTEMPNKNVIS 415
Query: 403 WTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI 462
W +I A HG E + ++ M + P+++TF+ LL ACSH GL G F M
Sbjct: 416 WNVIIGALAMHGRAQETVTFFRTMVSDAFSPDEITFVGLLSACSHGGLLEAGEYYFEAMA 475
Query: 463 NKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLG 522
Y + P EH+ C+VDL RRG L A N+I+ M+IKP +W A+LGAC I+GN +G
Sbjct: 476 RVYNVEPEVEHYGCMVDLLGRRGHLAKAVNLIKDMSIKPDVVVWGALLGACRIHGNVEIG 535
Query: 523 ELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+L + L ++E +V++ N++ W++ +K RKLM+E+ +K+ G S ++ K
Sbjct: 536 KLVIKQLLELEGITGGLFVLICNLFYETNQWEDMKKLRKLMKEQGTKKDMGVSSIEV--K 593
Query: 583 NIL 585
NI+
Sbjct: 594 NII 596
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 167/383 (43%), Gaps = 43/383 (11%)
Query: 2 NIVRANFKTGQLKQALKFSLSCP--------DTLLDPSTYMSLLQFCIDKKAERQAHLIH 53
N+V N G QA + S +C L D T +SLL C + L+H
Sbjct: 179 NVVSWNTMIGGYAQAGEVSEACALFGEMRHQGLLADVFTLVSLLFACSSEGNLEVGRLVH 238
Query: 54 AHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWT------------- 100
H++ +G + L ++ Y K GD+ A + FD MP +NVV+WT
Sbjct: 239 CHMLVSGSRVDRILGNALLDMYGKCGDLWMAHRCFDMMPIKNVVTWTSMLCAQAKHGSVD 298
Query: 101 ------------------AMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA 142
AMIS Y Q G L +++ M G+ ++FT + L AC
Sbjct: 299 AVRDWFEQMPERNIVSWNAMISCYVQCGRLHETLDLYNRMRSLGITPDEFTLAGVLSACG 358
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
+ L G+MI ++ + + ++LLD+YA+CG ++ A LF + K+V+SWN
Sbjct: 359 QNGDLASGKMIHCYVRDNFNDPGVTLLNSLLDMYARCGQVDTAIGLFTEMPNKNVISWNV 418
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKL 261
+IG LAM G ++ FR+M+ PD T +L A S GG+ +
Sbjct: 419 IIGALAMHGRAQETVTFFRTMVSDAFSPDEITFVGLLSACSHGGLLEAGEYYFEAMARVY 478
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALISGFARDDNHSKEAFD 320
+E + G ++D+ + G + A L + M +K D++ AL+ N E
Sbjct: 479 NVEPEVEHYGCMVDLLGRRGHLAKAVNLIKDMSIKPDVVVWGALLGACRIHGN--VEIGK 536
Query: 321 LFKDMILKKMGIDDVILCLMLNI 343
L +L+ GI + L+ N+
Sbjct: 537 LVIKQLLELEGITGGLFVLICNL 559
>gi|297815974|ref|XP_002875870.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321708|gb|EFH52129.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 700
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 176/555 (31%), Positives = 295/555 (53%), Gaps = 1/555 (0%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS 83
P D S +L+ C +HA+ + S++ + + ++ Y +VG +
Sbjct: 96 PAVSPDTSVVSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKIEK 155
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
+ + F MP RN V+WTA+I+G G + L FS M S ++ FT++ AL+ACA
Sbjct: 156 SCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKACAG 215
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
+R ++ G+ I + F ++V ++L +Y +CG + D LFE + +DVVSW ++
Sbjct: 216 LRQVKYGKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDVVSWTSL 275
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGL 263
I G + + F M + P+ T ++ A L+ Q+H + LGL
Sbjct: 276 IVAYNRIGHEEKAVETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCNVFSLGL 335
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
S ++ S++ +Y+ G + SA L++ M DIIS + +I G+++ +EAF F
Sbjct: 336 NDSLSVSNSMMKMYSTCGKLDSASVLFQGMRCRDIISWSTIIGGYSQA-GFGEEAFKYFS 394
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
M D L +L++ N+A L GRQ+HA AF + ++ V + LI+MY+K G
Sbjct: 395 WMRQSGPKPTDFALASLLSVSGNMAVLEGGRQVHALAFCFGLEQNSTVRSTLINMYSKCG 454
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
I +A++ F+E +++S T++I GYA+HG EAI+L++K G P+ VTF+S+L
Sbjct: 455 NIKEASKIFEETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFSPDSVTFISVLT 514
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
AC+H+G G+ F M KY + P EH+ C+VDL R G+L A MI +M+ K
Sbjct: 515 ACTHSGQLDLGFHYFNLMQEKYNMRPAKEHYGCMVDLLCRAGRLSEAEKMIDEMSWKKDD 574
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
+W+ +L AC G+ G AA + +++P + V L+NIY++ G + A RK M
Sbjct: 575 VVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNM 634
Query: 564 EERSLRKNPGYSFLQ 578
+ + + K PG+S ++
Sbjct: 635 KAKGVIKEPGWSSIK 649
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 147/582 (25%), Positives = 274/582 (47%), Gaps = 63/582 (10%)
Query: 35 SLLQFC------IDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
++ +FC ++K E+ ++ +++N HL + + G++ AR+ F
Sbjct: 10 TIQRFCTASISLLEKPVEKTIQVVT-------FDTNSHLRSLI-----NAGNLRVARQVF 57
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAM--LRSGVRANQFTYSSALRACARMRW 146
D+MP R++VSWTA+I GY + A+++FSAM + V + S L+AC +
Sbjct: 58 DKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRVVDPAVSPDTSVVSVVLKACGQSSN 117
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
+ G + K + ++FV S+LLD+Y + G IE + +F + ++ V+W A+I G
Sbjct: 118 IAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKSCRVFSEMPFRNAVTWTAIITG 177
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
L G + F M D FT L+A G ++ QIH +I G +++
Sbjct: 178 LVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKACAGLRQVKYGKQIHTHVIVRGFDAT 237
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ SL +Y + G +R L+ +M + D++S T+LI + R H ++A + F M
Sbjct: 238 VWVANSLATMYTECGEMRDGLCLFENMSERDVVSWTSLIVAYNR-IGHEEKAVETFIKMR 296
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
++ ++ M + CA+++ L G Q+H F + +V N+++ MY+ G++
Sbjct: 297 NSQVPPNEQTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSVSNSMMKMYSTCGKLD 356
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A+ F M +++ISW+++I GY++ G+G EA + + M+ G P D SLL
Sbjct: 357 SASVLFQGMRCRDIISWSTIIGGYSQAGFGEEAFKYFSWMRQSGPKPTDFALASLLSVSG 416
Query: 447 -----------HTGLTCEGWE----LFTDMINKY----------RILPRAEH-----FSC 476
H C G E + + +IN Y +I + +
Sbjct: 417 NMAVLEGGRQVHALAFCFGLEQNSTVRSTLINMYSKCGNIKEASKIFEETDRDDIVSLTA 476
Query: 477 VVDLFARRGQLESAYNMIR---QMNIKPTASLWSAILGACSIYGNTSLGELAARNL---- 529
+++ +A G+ + A ++ ++ P + + ++L AC+ G LG NL
Sbjct: 477 MINGYAEHGKSKEAIDLFEKSLKVGFSPDSVTFISVLTACTHSGQLDLG-FHYFNLMQEK 535
Query: 530 FDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKN 571
++M P K +Y + ++ AG A K+++E S +K+
Sbjct: 536 YNMRPAKE-HYGCMVDLLCRAGRLSEA---EKMIDEMSWKKD 573
>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
Length = 637
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 170/510 (33%), Positives = 279/510 (54%), Gaps = 3/510 (0%)
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
Y+++G++ + RKAFD MP ++VSW A+I+ Y N + L F ML G+ +
Sbjct: 5 YSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPGEVGI 64
Query: 135 SSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER 194
S L AC R + GR IQ +I E V++AL+ +Y K G DA +F R+
Sbjct: 65 SIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMSH 124
Query: 195 KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQI 254
+DVV+W+AM+ A G ++ LFR M G+ P+ TL S L A +L + +
Sbjct: 125 RDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALM 184
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH 314
H + G++S + +L+++Y K G I +A + + +++ ++++ +A+ + +AR+D
Sbjct: 185 HQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDR- 243
Query: 315 SKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSY--DAAVG 372
+++A + M L+ + + +L+ CA +A+L GR+IH D V
Sbjct: 244 NRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVL 303
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
AL++MY+K G +A A FD++ +++ W SLIA A+HG +A+EL+++M+ EG+
Sbjct: 304 TALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQ 363
Query: 433 PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYN 492
P +TF S+LFACSH G+ +G + F I + I P AEHF C+VDL R G + + +
Sbjct: 364 PTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSED 423
Query: 493 MIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGA 552
++ M +P W A LGAC Y N AA NLF ++P K YV+LSN+Y AG
Sbjct: 424 LLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLLSNMYAKAGR 483
Query: 553 WDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
W + + R+ M+ K G S+++ +
Sbjct: 484 WSDVARMRQAMQLFMTVKEAGRSWIEVKDR 513
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 180/383 (46%), Gaps = 40/383 (10%)
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND-DSFWL-FRSMMRQGMK 229
+L Y++ G I F+ + D+VSWNA+I A G D D WL FR M+ QG+
Sbjct: 1 MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIA--AYIGNRDFDRCWLFFRGMLLQGIN 58
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
P + L A E+ I I+ G+E + + +L+ +Y K G A +
Sbjct: 59 PGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASV 118
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ M D+++ +A+++ +AR + H +EA LF+ M L + + V L L+ CA++
Sbjct: 119 FLRMSHRDVVAWSAMVAAYAR-NGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGD 177
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
L G +H VG AL+++Y K G I A AF ++ +KNV++W+++ A
Sbjct: 178 LRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAA 237
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWEL------------ 457
YA++ +AI + +M EG+VPN TF+S+L AC+ +G +
Sbjct: 238 YARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLE 297
Query: 458 -----FTDMINKYR----------ILPRAEHFSCV-----VDLFARRGQLESAYNMIRQM 497
T ++N Y + + H V + A+ GQ E A + +M
Sbjct: 298 SDVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERM 357
Query: 498 ---NIKPTASLWSAILGACSIYG 517
++PT ++++L ACS G
Sbjct: 358 RLEGLQPTIITFTSVLFACSHAG 380
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 187/377 (49%), Gaps = 5/377 (1%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
L C D + I I+ G E + T ++ Y K+G A F RM R+
Sbjct: 67 FLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMSHRD 126
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG 155
VV+W+AM++ YA+NG+ AL +F M GV N+ T S L ACA + L+ G ++
Sbjct: 127 VVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQ 186
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD 215
++ + V +AL++LY KCG IE A F +I K+VV+W+A+ A N D
Sbjct: 187 RVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRD 246
Query: 216 SFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHD--LIIKLGLESSNKLTGSL 273
+ + M +G+ P+ T S+L A L + +IH+ ++ GLES + +L
Sbjct: 247 AIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTAL 306
Query: 274 IDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGID 333
+++Y+K G++ A ++ + D++ +LI+ A+ +++A +LF+ M L+ +
Sbjct: 307 VNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQ-HGQTEKALELFERMRLEGLQPT 365
Query: 334 DVILCLMLNICANVASLNLGRQ-IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAF 392
+ +L C++ L+ GR+ +F + +A ++D+ ++G I D+
Sbjct: 366 IITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLL 425
Query: 393 DEMG-DKNVISWTSLIA 408
M + + ++W + +
Sbjct: 426 LHMPFEPHPVAWMAFLG 442
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 144/296 (48%), Gaps = 5/296 (1%)
Query: 3 IVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
+V A + G ++AL + + T +S L C R L+H + G
Sbjct: 133 MVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQG 192
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+S + + T ++ Y K G + +A +AF ++ E+NVV+W+A+ + YA+N + +A+ V
Sbjct: 193 IQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLH 252
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQ--KGRFVENLFVKSALLDLYAK 178
M G+ N T+ S L ACA + L+ GR I Q G +++V +AL+++Y+K
Sbjct: 253 RMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSK 312
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
CG + A +F++I D+V WN++I A G + + LF M +G++P T S+
Sbjct: 313 CGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSV 372
Query: 239 LRA-SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
L A S G+ I G+ + G ++D+ + G I + L M
Sbjct: 373 LFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHM 428
>gi|255578965|ref|XP_002530335.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
gi|223530139|gb|EEF32051.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
Length = 1530
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 154/414 (37%), Positives = 247/414 (59%), Gaps = 1/414 (0%)
Query: 165 NLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMM 224
NL V + LL +Y + DA+ LF+ + +K+ VSW+ MIGG G + F+ ++
Sbjct: 1114 NLTVANKLLYVYVHHKCLTDAYALFDEMPQKNPVSWSIMIGGFVKVGEFMQCYKTFKELI 1173
Query: 225 RQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIR 284
R G++PD +TL +++A + L IH +++K GL + + +L+D+YAK I
Sbjct: 1174 RNGVQPDNYTLPFVIKACRDTVALDMGRLIHCVVLKYGLHLDHFVCAALVDMYAKCKVIE 1233
Query: 285 SAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNIC 344
A L+ M D+++ T +I G+A N +KE+ LF + + D + + ++N C
Sbjct: 1234 DAKLLFDVMPSKDLVTWTVMIGGYAECGN-AKESLVLFDHLREEGFVPDKIAMVSIVNAC 1292
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWT 404
A + ++N R +H + + + S D +G A+IDMYAK G++ A FD M KNVISW+
Sbjct: 1293 AKLGAMNKARFVHEYVNRNRFSLDVILGTAMIDMYAKCGDVDSAREIFDNMHHKNVISWS 1352
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK 464
++IA Y HG G +A+EL+ M G++PN++TF+SLL+ACSH GL +G L + M
Sbjct: 1353 AMIAAYGYHGQGKKALELFPMMLSSGILPNNITFVSLLYACSHAGLVEDGLTLLSLMWES 1412
Query: 465 YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGEL 524
+ + P +H +C+VDL R GQL A+ I M ++ LWS++LGAC I+ L E
Sbjct: 1413 FGVRPDIKHHTCMVDLLGRAGQLTEAFRFIENMTVEKDEGLWSSLLGACRIHKRIDLAEK 1472
Query: 525 AARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
AA++L +++P+ NY++LSNIY AG W + K R LM +R L+K PGY++++
Sbjct: 1473 AAKSLLELQPQNPGNYILLSNIYANAGQWKDVAKIRDLMTKRKLKKIPGYTWIE 1526
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 201/400 (50%), Gaps = 9/400 (2%)
Query: 19 FSLSCPDT--LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGY-ESNLHLSTKVIIFY 75
+S PD +DP+ +S L C K Q +HA I TN +NL ++ K++ Y
Sbjct: 1069 LKISNPDFSFFMDPNCLISTLLNC---KNICQIKQLHALITTNSVLYNNLTVANKLLYVY 1125
Query: 76 AKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYS 135
+ A FD MP++N VSW+ MI G+ + G F ++R+GV+ + +T
Sbjct: 1126 VHHKCLTDAYALFDEMPQKNPVSWSIMIGGFVKVGEFMQCYKTFKELIRNGVQPDNYTLP 1185
Query: 136 SALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERK 195
++AC L GR+I + K + FV +AL+D+YAKC IEDA +LF+ + K
Sbjct: 1186 FVIKACRDTVALDMGRLIHCVVLKYGLHLDHFVCAALVDMYAKCKVIEDAKLLFDVMPSK 1245
Query: 196 DVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIH 255
D+V+W MIGG A G +S LF + +G PD + SI+ A + K +H
Sbjct: 1246 DLVTWTVMIGGYAECGNAKESLVLFDHLREEGFVPDKIAMVSIVNACAKLGAMNKARFVH 1305
Query: 256 DLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHS 315
+ + + L ++ID+YAK G + SA +++ +M ++IS +A+I+ +
Sbjct: 1306 EYVNRNRFSLDVILGTAMIDMYAKCGDVDSAREIFDNMHHKNVISWSAMIAAYGY-HGQG 1364
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK-YQSSYDAAVGNA 374
K+A +LF M+ + +++ +L C++ + G + + ++ + D
Sbjct: 1365 KKALELFPMMLSSGILPNNITFVSLLYACSHAGLVEDGLTLLSLMWESFGVRPDIKHHTC 1424
Query: 375 LIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKH 413
++D+ ++G++ +A R + M +K+ W+SL+ H
Sbjct: 1425 MVDLLGRAGQLTEAFRFIENMTVEKDEGLWSSLLGACRIH 1464
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 170/487 (34%), Positives = 269/487 (55%), Gaps = 9/487 (1%)
Query: 97 VSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGS 156
W + A+ AL ++ MLR G R N FT+ AL++CA + G G
Sbjct: 6 TPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQ 65
Query: 157 IQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER--IERKDVVSWNAMIGGLAMQGFND 214
I K V FV++ L+ +Y K +++A +FE RK V +NA++ G
Sbjct: 66 ITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCS 125
Query: 215 DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLI 274
D+ LFR M +G+ + TL ++ A V I L S +H +K G +S + I
Sbjct: 126 DAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFI 185
Query: 275 DVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD 334
+Y K GS+ A +L+ M +IS A++SG+A++ + +L+++M + + D
Sbjct: 186 TMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQN-GLATNVLELYRNMDMNGVHPDP 244
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQSS---YDAAVGNALIDMYAKSGEIADANRA 391
V L +L+ CAN+ + ++G H FK Q+S + + NALI+MYA+ G + A
Sbjct: 245 VTLVGVLSSCANLGAQSVG---HEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAV 301
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLT 451
FD M ++ ++SWT++I GY HG+G A++L+K+M G+ P+ F+ +L ACSH GLT
Sbjct: 302 FDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLT 361
Query: 452 CEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
+G E F M Y++ P EH+SC+VDL R G+L+ A +I M IKP ++W A+LG
Sbjct: 362 DQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLG 421
Query: 512 ACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKN 571
AC I+ N L ELA + ++EPE YV+LSNIY+ A + R +M+E+ L+K+
Sbjct: 422 ACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKD 481
Query: 572 PGYSFLQ 578
PG S+++
Sbjct: 482 PGCSYVE 488
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 135/268 (50%), Gaps = 2/268 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T + L+ C+ +H + G++S++ + I Y K G V A+K FD M
Sbjct: 145 TLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEM 204
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P + ++SW AM+SGYAQNG N L ++ M +GV + T L +CA + G
Sbjct: 205 PVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGH 264
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
++ +Q F N F+ +AL+++YA+CG + A +F+ + + +VSW A+IGG M G
Sbjct: 265 EVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHG 324
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLT 270
+ + LF+ M+R G++PD +L A S G+ + + LE +
Sbjct: 325 HGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHY 384
Query: 271 GSLIDVYAKYGSIRSAYQLYRSM-LKTD 297
++D+ + G ++ A L SM +K D
Sbjct: 385 SCMVDLLGRAGRLKEAQTLIESMPIKPD 412
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 169/368 (45%), Gaps = 11/368 (2%)
Query: 53 HAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR--MPERNVVSWTAMISGYAQNG 110
H I G + T +I Y K V +ARK F+ + V + A++SGY N
Sbjct: 63 HGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNS 122
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
+A+L+F M GV N T + AC L+ G + S K F ++ V +
Sbjct: 123 KCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVN 182
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
+ +Y KCG + A LF+ + K ++SWNAM+ G A G + L+R+M G+ P
Sbjct: 183 CFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHP 242
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKL---GLESSNKLTGSLIDVYAKYGSIRSAY 287
D TL +L + L S H++ K+ G S+ L +LI++YA+ G++ A
Sbjct: 243 DPVTLVGVLSSCA---NLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQ 299
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
++ M + ++S TA+I G+ H + A LFK+MI + D +L+ C++
Sbjct: 300 AVFDGMPERTLVSWTAIIGGYGM-HGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHA 358
Query: 348 ASLNLGRQIHAFAFK-YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK-NVISWTS 405
+ G + + YQ + ++D+ ++G + +A + M K + W +
Sbjct: 359 GLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGA 418
Query: 406 LIAGYAKH 413
L+ H
Sbjct: 419 LLGACKIH 426
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 96/182 (52%), Gaps = 8/182 (4%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
DP T + +L C + A+ H + + +G+ SN L+ +I YA+ G++ A+ F
Sbjct: 243 DPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVF 302
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D MPER +VSWTA+I GY +G+ E A+ +F M+RSG+ + + L AC+
Sbjct: 303 DGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTD 362
Query: 149 GG----RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAM 203
G +M++ + Q E+ S ++DL + G +++A L E + + D W A+
Sbjct: 363 QGLEYFKMMKRNYQLEPGPEHY---SCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGAL 419
Query: 204 IG 205
+G
Sbjct: 420 LG 421
>gi|326526103|dbj|BAJ93228.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 190/549 (34%), Positives = 300/549 (54%), Gaps = 42/549 (7%)
Query: 63 SNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAM 122
S++ + I A G V AR+ FDR P+R+VVSWTAM++ YA+ G A SA+
Sbjct: 37 SHVQDPNRRIAELAAAGRVPDARRLFDRTPDRDVVSWTAMVAAYARQGQLHEA----SAL 92
Query: 123 L-RSGVRANQFTYSSALRACARMRWLQGGR----------------MIQGSIQKGR---- 161
L R R N T+++ L AR R + R M++ GR
Sbjct: 93 LHRPDARRNVVTWTALLSGYARARRVDEARALFDRMPERNVVSWNTMLEAYASAGRMGAA 152
Query: 162 --FVENLFVKSA-----LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND 214
+ + V+ A LL + G +++A LFER+ ++V+SW MI GLA G D
Sbjct: 153 CALFDGMPVRDAGSWNILLAALVRSGTMDEARRLFERMPERNVMSWTTMISGLARSGSAD 212
Query: 215 DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLI 274
++ LF M + + + +++ G ++I + DL + + E +I
Sbjct: 213 EARALFDGMPER----NVVSWNAMIS---GYARNLRIDEALDLFMNMP-ERDVASWNIMI 264
Query: 275 DVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD 334
+ + ++ A +L+ M K +++S T +++G + N S+ A +F M++ + +
Sbjct: 265 TGFIQNKDLKKAQELFDEMPKRNVVSWTTMMNGCLQG-NESEMALQVFNGMLVDGIRPNQ 323
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE 394
V ++ +N+A L+ G+Q+H K +D + ++L+ +YAK GEI A + FD
Sbjct: 324 VTFLGAVDAGSNLAGLSEGQQVHQMICKTPFQFDNFIESSLMKLYAKCGEIRLARKVFDL 383
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG 454
G+K+VISW +IA YA HG G EAI LY+KM+ PNDVT++ LL ACSH+GL EG
Sbjct: 384 SGEKDVISWNGMIAAYAHHGAGVEAIALYEKMQENRYKPNDVTYVGLLSACSHSGLVDEG 443
Query: 455 WELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS-LWSAILGAC 513
+F M I R EH+SC++DL +R G+L+ A +I + +KPT+S +WSA+LG C
Sbjct: 444 LRIFEYMAKDKSIAVRDEHYSCLIDLCSRAGRLDDAKRLINGLKLKPTSSTVWSALLGGC 503
Query: 514 SIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPG 573
+ +GN S+G+LAARNL + EP+ + Y +LSNIY +AG W A K R M +R L+K PG
Sbjct: 504 NAHGNESIGDLAARNLLEAEPDNAGTYTLLSNIYASAGKWKEAAKIRSEMNDRGLKKQPG 563
Query: 574 YSFLQSSKK 582
S+++ + K
Sbjct: 564 CSWIELANK 572
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 164/356 (46%), Gaps = 43/356 (12%)
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSA 121
E N+ T +I A+ G AR FD MPERNVVSW AMISGYA+N + AL +F
Sbjct: 192 ERNVMSWTTMISGLARSGSADEARALFDGMPERNVVSWNAMISGYARNLRIDEALDLFMN 251
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
M V + MI G F++N +K A
Sbjct: 252 MPERDVASWNI-------------------MITG------FIQNKDLKKAQE-------- 278
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
LF+ + +++VVSW M+ G ++ + +F M+ G++P+ T + A
Sbjct: 279 ------LFDEMPKRNVVSWTTMMNGCLQGNESEMALQVFNGMLVDGIRPNQVTFLGAVDA 332
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC 301
L + Q+H +I K + N + SL+ +YAK G IR A +++ + D+IS
Sbjct: 333 GSNLAGLSEGQQVHQMICKTPFQFDNFIESSLMKLYAKCGEIRLARKVFDLSGEKDVISW 392
Query: 302 TALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF 361
+I+ +A EA L++ M + +DV +L+ C++ ++ G +I +
Sbjct: 393 NGMIAAYAH-HGAGVEAIALYEKMQENRYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMA 451
Query: 362 KYQS-SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVIS--WTSLIAGYAKHG 414
K +S + + LID+ +++G + DA R + + K S W++L+ G HG
Sbjct: 452 KDKSIAVRDEHYSCLIDLCSRAGRLDDAKRLINGLKLKPTSSTVWSALLGGCNAHG 507
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 14/206 (6%)
Query: 48 QAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYA 107
+ +H I ++ + + + ++ YAK G++ ARK FD E++V+SW MI+ YA
Sbjct: 341 EGQQVHQMICKTPFQFDNFIESSLMKLYAKCGEIRLARKVFDLSGEKDVISWNGMIAAYA 400
Query: 108 QNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLF 167
+G A+ ++ M + + N TY L AC+ + G I + K + ++
Sbjct: 401 HHGAGVEAIALYEKMQENRYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMAKDK---SIA 457
Query: 168 VK----SALLDLYAKCGWIEDAWILFERIERKDVVS--WNAMIGGLAMQGFNDDSFWLFR 221
V+ S L+DL ++ G ++DA L ++ K S W+A++GG G R
Sbjct: 458 VRDEHYSCLIDLCSRAGRLDDAKRLINGLKLKPTSSTVWSALLGGCNAHGNESIGDLAAR 517
Query: 222 SMMRQGMKPD---CFTLGSILRASVG 244
+++ +PD +TL S + AS G
Sbjct: 518 NLLEA--EPDNAGTYTLLSNIYASAG 541
>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
Length = 1068
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 178/532 (33%), Positives = 288/532 (54%), Gaps = 16/532 (3%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H G+ + ++ ++ YAK + A + F M E++VVSW++MI+G+ N
Sbjct: 421 LHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHR 480
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+AL F ML V+ N T+ +AL ACA L+ G+ I + + +V +A
Sbjct: 481 SFDALYYFRYML-GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNA 539
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMM-----RQ 226
LLDLY KCG AW F KDVVSWN M+ G G D + LF MM R
Sbjct: 540 LLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSLGRM 599
Query: 227 GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSA 286
G + R VG ++H+L G + +L+++YAK I A
Sbjct: 600 GACSALAACACLGRLDVG-------IKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKA 652
Query: 287 YQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICAN 346
++++ M + D++S +++I+GF + + S +A F+ M L + + V L+ CA
Sbjct: 653 IEVFKFMAEKDVVSWSSMIAGFCFN-HRSFDALYYFRYM-LGHVKPNSVTFIAALSACAA 710
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
+L G++IHA+ + + V NAL+D+Y K G+ + A F +K+V+SW +
Sbjct: 711 TGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIM 770
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYR 466
++G+ HG G A+ L+ +M G P++VTF+ L+ ACS G+ +GWELF K+
Sbjct: 771 LSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFV-LMCACSRAGMVIQGWELFHRRTEKFS 829
Query: 467 ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAA 526
I+P +H++C+VDL +R G+L AYN+I +M IKP A++W A+L C I+ + LGELAA
Sbjct: 830 IVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAA 889
Query: 527 RNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+ + ++EP +V+L ++YT AG W + RK M E+ L ++ G S+++
Sbjct: 890 KVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVE 941
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 156/526 (29%), Positives = 258/526 (49%), Gaps = 16/526 (3%)
Query: 4 VRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYES 63
+RA GQL QAL S P+ D Y++L + C ++A A
Sbjct: 71 LRALCSHGQLAQALWLLESSPEPP-DEGAYVALFRLCEWRRAVDAGMRACARADAEHPSF 129
Query: 64 NLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML 123
L L ++ + G++ A + F +MPER+V SW M+ GY + G+ E AL ++ ML
Sbjct: 130 GLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRML 189
Query: 124 RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIE 183
+G+R + +T+ LR C + + GR + + + F + + V +AL+ +YAKCG I
Sbjct: 190 WAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIV 249
Query: 184 DAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV 243
A +F+ + D +SWNAMI G + LF +M+ ++P+ T+ S+ AS
Sbjct: 250 AARKVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASG 309
Query: 244 GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTA 303
E+ ++H +K G SLI +Y G + A +++ M D +S TA
Sbjct: 310 MLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTA 369
Query: 304 LISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY 363
+ISG+ ++ K A +++ M L + DDV + L CA + L++G ++H A
Sbjct: 370 MISGYEKNGFPDK-ALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNK 428
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELY 423
V NAL++MYAKS I A F M +K+V+SW+S+IAG+ + +A+ +
Sbjct: 429 GFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYF 488
Query: 424 KKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM----INKYRILPRAEHFSCVVD 479
+ M + PN VTF++ L AC+ TG G E+ + I +P A ++D
Sbjct: 489 RYMLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNA-----LLD 542
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
L+ + GQ A+ + K S W+ +L +G LG++A
Sbjct: 543 LYVKCGQTSYAWAQFSVHSEKDVVS-WNIMLSGFVAHG---LGDIA 584
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 214/420 (50%), Gaps = 4/420 (0%)
Query: 9 KTGQLKQALK--FSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K G L++AL + + D T+ +L+ C R +HAH++ G+ +
Sbjct: 174 KVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVD 233
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ ++ YAK GD+++ARK FD M + +SW AMI+G+ +N E L +F ML +
Sbjct: 234 VLNALVTMYAKCGDIVAARKVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENE 293
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
V+ N T +S A + + + + G K F ++ ++L+ +Y G + DA
Sbjct: 294 VQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAG 353
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+F R+E KD +SW AMI G GF D + ++ M + PD T+ S L A
Sbjct: 354 KIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLG 413
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
L ++H+L G + +L+++YAK I A ++++ M + D++S +++I+
Sbjct: 414 RLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIA 473
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
GF ++ S +A F+ M L + + V L+ CA +L G++IHA+ +
Sbjct: 474 GFCF-NHRSFDALYYFRYM-LGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIG 531
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
+ V NAL+D+Y K G+ + A F +K+V+SW +++G+ HG G A+ L+ +M
Sbjct: 532 SEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQM 591
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 88/177 (49%), Gaps = 3/177 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+++ L C A R IHA+++ G S ++ ++ Y K G A F
Sbjct: 700 TFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVH 759
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW-LQGG 150
E++VVSW M+SG+ +G + AL +F+ M+ G ++ T+ + AC+R +QG
Sbjct: 760 SEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTF-VLMCACSRAGMVIQGW 818
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGG 206
+ +K V NL + ++DL ++ G + +A+ L R+ + D W A++ G
Sbjct: 819 ELFHRRTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNG 875
>gi|359485688|ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
gi|297739328|emb|CBI28979.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 182/553 (32%), Positives = 302/553 (54%), Gaps = 26/553 (4%)
Query: 34 MSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVI-IFYAKVGDVLSARKAFDRMP 92
+SLLQ K Q IHA +IT S+ +++++ +K +V A F ++
Sbjct: 15 LSLLQ---KSKTSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIH 71
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
+ N M+ Y ++ E AL ++ M R G+ + +TY L+AC M L G +
Sbjct: 72 QPNSFICNTMVKCYTESSTPERALRFYAEMRRKGLLGDNYTYPFVLKACGAMCGLLEGGL 131
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF 212
+QG K F ++FV + L+ +Y +CG A +F+ KD+VSWN+M+GG G
Sbjct: 132 VQGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGE 191
Query: 213 NDDSFWLF-----RSMMRQGMKPDCF--TLGSILRASVGGIELMKISQIHDLIIKLGLES 265
+++ +F R ++ + D + +G + RA V D + L S
Sbjct: 192 MENAQNMFDEMPERDVVSWSIMIDGYGKKMGEVNRARV----------FFDSMPTRDLVS 241
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
N S+ID YAK G + A +++ ML+ ++IS + +I G+A+ + SKEA +LF+ M
Sbjct: 242 WN----SMIDGYAKVGEMEVAREIFDKMLQKNVISWSIMIDGYAQHRD-SKEALNLFRQM 296
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ + + D V + ++ C+ + +L+ GR IH + + + D V AL+DMY K G
Sbjct: 297 LCQGIKPDRVSVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSR 356
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
+A R F+ M ++NV+SW +I G +G+G EA+E + +M+ E + +D+ FL +L AC
Sbjct: 357 DEARRIFNSMPERNVVSWNVMIVGLGMNGFGKEALECFTQMEMERIPMDDLLFLGVLMAC 416
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
SH L EG +F M YR+ P+ EH+ C+VDL R GQL+ N+I+ M +KP A+L
Sbjct: 417 SHANLVTEGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAAL 476
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
W ++L AC I+ N +L E+ L +++ + S YV++SNIY G W+ + RKLM+E
Sbjct: 477 WGSLLLACRIHQNVTLAEIVVERLAELKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKE 536
Query: 566 RSLRKNPGYSFLQ 578
R ++K+ G S ++
Sbjct: 537 RKMKKDIGRSVIE 549
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 197/432 (45%), Gaps = 44/432 (10%)
Query: 2 NIVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
+V+ ++ ++AL+F + L D TY +L+ C + L+ +
Sbjct: 80 TMVKCYTESSTPERALRFYAEMRRKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEAVKR 139
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G+ ++ + +I Y + G+ AR FD E+++VSW +M+ GY G ENA +F
Sbjct: 140 GFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMF 199
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRF------VENLFVKSALL 173
M V ++S + G +M G + + R +L ++++
Sbjct: 200 DEMPERDV----VSWSIMIDG-------YGKKM--GEVNRARVFFDSMPTRDLVSWNSMI 246
Query: 174 DLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD-- 231
D YAK G +E A +F+++ +K+V+SW+ MI G A + ++ LFR M+ QG+KPD
Sbjct: 247 DGYAKVGEMEVAREIFDKMLQKNVISWSIMIDGYAQHRDSKEALNLFRQMLCQGIKPDRV 306
Query: 232 --------CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
C LG++ + + + + + D++++ +L+D+Y K GS
Sbjct: 307 SVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQT----------ALVDMYLKCGSR 356
Query: 284 RSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNI 343
A +++ SM + +++S +I G + KEA + F M ++++ +DD++ +L
Sbjct: 357 DEARRIFNSMPERNVVSWNVMIVGLGM-NGFGKEALECFTQMEMERIPMDDLLFLGVLMA 415
Query: 344 CANVASLNLGRQI-HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK-NVI 401
C++ + G I + Y+ L+D+ ++G++ M K N
Sbjct: 416 CSHANLVTEGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAA 475
Query: 402 SWTSLIAGYAKH 413
W SL+ H
Sbjct: 476 LWGSLLLACRIH 487
>gi|255545144|ref|XP_002513633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547541|gb|EEF49036.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 177/537 (32%), Positives = 287/537 (53%), Gaps = 5/537 (0%)
Query: 51 LIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
LIHAH I G + NL L T ++ Y++ + A K PE +V+ WTA+ISG AQN
Sbjct: 241 LIHAHAIVLGVKLNLVLKTALVNMYSRCQRIEDAIKVSKLTPEYDVILWTAIISGLAQNM 300
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
+ A+ F M SGV A+ FTY S L C + L GR I + + +++ V +
Sbjct: 301 KFQEAVAAFHKMEISGVSASNFTYLSMLSVCISILSLDLGRQIHSRVIRTGLEDDVPVGN 360
Query: 171 ALLDLYAKCGWI-EDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
AL+D+Y KC I E +F I+ +V+SW ++I G A GF DS LF M G++
Sbjct: 361 ALVDMYMKCSCIVEHGLRMFRGIKSPNVISWTSLIAGFAEHGFQQDSLNLFMEMRTVGVQ 420
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
P+ FTL +LR + ++H IIK + + +L+D YA G + A+++
Sbjct: 421 PNSFTLSIVLRVCSAIKSPYQTLKLHGHIIKTKADYDVVVGNALVDAYAGSGRVDDAWRV 480
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ M + D I+ T+L + + H + A + M + ID L + A++
Sbjct: 481 VKDMNQRDSITYTSLATRLNQMGYH-ELALSVISHMFNADVKIDGFSLTCFFSASASLGR 539
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
+ G+Q+H ++ K S +V N LID+Y K G + +A RAF E+ + +V+SW LI+G
Sbjct: 540 IETGKQLHCYSLKSGLSCCLSVANGLIDLYGKYGLVHEARRAFTEITEPDVVSWNGLISG 599
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
A +G+ A+ + M+ G+ P+ +TFL +L CSH GL G + F M + + P
Sbjct: 600 LASNGHISSALSAFDDMRLRGIQPDSITFLLVLSTCSHGGLVDMGLQYFHSMREMHDVEP 659
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
+++H+ C+VD+ R G+LE A N+I M ++P AS++ +L ACSI+ N +LGE AR
Sbjct: 660 QSDHYVCLVDILGRAGRLEEAMNIIETMPLEPDASIYKTLLAACSIHRNMNLGEDVARRG 719
Query: 530 FDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKNILL 586
++ P +++L +Y G +D KTR+ ++++ +Q+ KN+ L
Sbjct: 720 LELNPLDPAFHLLLVKLYDDCGRYDLGEKTRRSIKQKGW---TAMGRVQADDKNVTL 773
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 151/470 (32%), Positives = 251/470 (53%), Gaps = 14/470 (2%)
Query: 44 KAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMI 103
K+ ++ IH+ II G + +L+L+ ++ Y+K V AR+ FD MP R+VVSWT ++
Sbjct: 33 KSLKEGVCIHSPIIKLGLQDHLYLNNNLLSLYSKCFSVEHARQFFDEMPCRDVVSWTGIL 92
Query: 104 SGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFV 163
S + +N E AL +F M+ SG N FT+SS LR+C + G+ I S K F
Sbjct: 93 SAHIKNERHEEALDIFDFMVLSGPYPNAFTFSSILRSCFALGDFSYGKRIHASSIKHGFE 152
Query: 164 ENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM 223
N + S+L+DLY++ EDA LF ++ D VSW +I G + ++ M
Sbjct: 153 SNQILGSSLIDLYSRFDSTEDACKLFSYMDSGDTVSWTTVIASCVQAGKCSHALRIYMEM 212
Query: 224 MRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGS 282
+ + + FT +L A S G++ K+ IH I LG++ + L +L+++Y++
Sbjct: 213 LEAQVSSNEFTFVRLLAASSFIGLQYGKL--IHAHAIVLGVKLNLVLKTALVNMYSRCQR 270
Query: 283 IRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLN 342
I A ++ + + D+I TA+ISG A++ +EA F M + + + ML+
Sbjct: 271 IEDAIKVSKLTPEYDVILWTAIISGLAQNMKF-QEAVAAFHKMEISGVSASNFTYLSMLS 329
Query: 343 ICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN-RAFDEMGDKNVI 401
+C ++ SL+LGRQIH+ + D VGNAL+DMY K I + R F + NVI
Sbjct: 330 VCISILSLDLGRQIHSRVIRTGLEDDVPVGNALVDMYMKCSCIVEHGLRMFRGIKSPNVI 389
Query: 402 SWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM 461
SWTSLIAG+A+HG+ +++ L+ +M+ G+ PN T +L CS + +L +
Sbjct: 390 SWTSLIAGFAEHGFQQDSLNLFMEMRTVGVQPNSFTLSIVLRVCSAIKSPYQTLKLHGHI 449
Query: 462 INKYRILPRAEHFSCV----VDLFARRGQLESAYNMIRQMNIKPTASLWS 507
I +A++ V VD +A G+++ A+ +++ MN + + + S
Sbjct: 450 IKT-----KADYDVVVGNALVDAYAGSGRVDDAWRVVKDMNQRDSITYTS 494
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 197/387 (50%), Gaps = 8/387 (2%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS-ARKAFDR 90
TY+S+L CI + IH+ +I G E ++ + ++ Y K ++ + F
Sbjct: 323 TYLSMLSVCISILSLDLGRQIHSRVIRTGLEDDVPVGNALVDMYMKCSCIVEHGLRMFRG 382
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+ NV+SWT++I+G+A++G+ +++L +F M GV+ N FT S LR C+ ++
Sbjct: 383 IKSPNVISWTSLIAGFAEHGFQQDSLNLFMEMRTVGVQPNSFTLSIVLRVCSAIKSPYQT 442
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ G I K + ++ V +AL+D YA G ++DAW + + + ++D +++ ++ L
Sbjct: 443 LKLHGHIIKTKADYDVVVGNALVDAYAGSGRVDDAWRVVKDMNQRDSITYTSLATRLNQM 502
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSIL--RASVGGIELMKISQIHDLIIKLGLESSNK 268
G+++ + + M +K D F+L AS+G IE K Q+H +K GL
Sbjct: 503 GYHELALSVISHMFNADVKIDGFSLTCFFSASASLGRIETGK--QLHCYSLKSGLSCCLS 560
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ LID+Y KYG + A + + + + D++S LISG A + H A F DM L+
Sbjct: 561 VANGLIDLYGKYGLVHEARRAFTEITEPDVVSWNGLISGLA-SNGHISSALSAFDDMRLR 619
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQ-IHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ D + L+L+ C++ +++G Q H+ + + L+D+ ++G + +
Sbjct: 620 GIQPDSITFLLVLSTCSHGGLVDMGLQYFHSMREMHDVEPQSDHYVCLVDILGRAGRLEE 679
Query: 388 ANRAFDEMG-DKNVISWTSLIAGYAKH 413
A + M + + + +L+A + H
Sbjct: 680 AMNIIETMPLEPDASIYKTLLAACSIH 706
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 155/302 (51%), Gaps = 2/302 (0%)
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
++ L+ G I I K ++L++ + LL LY+KC +E A F+ + +DVVSW +
Sbjct: 32 LKSLKEGVCIHSPIIKLGLQDHLYLNNNLLSLYSKCFSVEHARQFFDEMPCRDVVSWTGI 91
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGL 263
+ ++++ +F M+ G P+ FT SILR+ + +IH IK G
Sbjct: 92 LSAHIKNERHEEALDIFDFMVLSGPYPNAFTFSSILRSCFALGDFSYGKRIHASSIKHGF 151
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
ES+ L SLID+Y+++ S A +L+ M D +S T +I+ + S A ++
Sbjct: 152 ESNQILGSSLIDLYSRFDSTEDACKLFSYMDSGDTVSWTTVIASCVQAGKCS-HALRIYM 210
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
+M+ ++ ++ +L ++ L G+ IHA A + + AL++MY++
Sbjct: 211 EMLEAQVSSNEFTFVRLLA-ASSFIGLQYGKLIHAHAIVLGVKLNLVLKTALVNMYSRCQ 269
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
I DA + + +VI WT++I+G A++ EA+ + KM+ G+ ++ T+LS+L
Sbjct: 270 RIEDAIKVSKLTPEYDVILWTAIISGLAQNMKFQEAVAAFHKMEISGVSASNFTYLSMLS 329
Query: 444 AC 445
C
Sbjct: 330 VC 331
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 3/181 (1%)
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN 399
++++C N+ SL G IH+ K + N L+ +Y+K + A + FDEM ++
Sbjct: 26 VVSLC-NLKSLKEGVCIHSPIIKLGLQDHLYLNNNLLSLYSKCFSVEHARQFFDEMPCRD 84
Query: 400 VISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFT 459
V+SWT +++ + K+ EA++++ M G PN TF S+L +C G G +
Sbjct: 85 VVSWTGILSAHIKNERHEEALDIFDFMVLSGPYPNAFTFSSILRSCFALGDFSYGKRIHA 144
Query: 460 DMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNT 519
I K+ S ++DL++R E A + M+ T S W+ ++ +C G
Sbjct: 145 SSI-KHGFESNQILGSSLIDLYSRFDSTEDACKLFSYMDSGDTVS-WTTVIASCVQAGKC 202
Query: 520 S 520
S
Sbjct: 203 S 203
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 166/501 (33%), Positives = 285/501 (56%), Gaps = 11/501 (2%)
Query: 88 FDRMPER-NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
F+R ++ +V SW ++I+ A++G ALL FS+M + + + ++ A++AC+ +
Sbjct: 32 FNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFD 91
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
+ G+ + ++FV SAL+ +Y+ CG +EDA +F+ I ++++VSW +MI G
Sbjct: 92 IFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRG 151
Query: 207 LAMQGFNDDSFWLFRSMM------RQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIK 260
+ G D+ LF+ ++ M D L S++ A IH +IK
Sbjct: 152 YDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIK 211
Query: 261 LGLESSNKLTGSLIDVYAK--YGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEA 318
G + + +L+D YAK G + A +++ ++ D +S +++S +A+ S EA
Sbjct: 212 RGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQS-GMSNEA 270
Query: 319 FDLFKDMILKKM-GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
F++F+ ++ K+ + + L +L ++ +L +G+ IH + D VG ++ID
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIID 330
Query: 378 MYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVT 437
MY K G + A +AFD M +KNV SWT++IAGY HG+ +A+EL+ M G+ PN +T
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390
Query: 438 FLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
F+S+L ACSH GL EGW F M ++ + P EH+ C+VDL R G L+ AY++I++M
Sbjct: 391 FVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450
Query: 498 NIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNAR 557
+KP + +WS++L AC I+ N L E++ LF+++ Y++LS+IY AG W +
Sbjct: 451 KMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVE 510
Query: 558 KTRKLMEERSLRKNPGYSFLQ 578
+ R +M+ R L K PG+S L+
Sbjct: 511 RVRMIMKNRGLVKPPGFSLLE 531
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 188/373 (50%), Gaps = 14/373 (3%)
Query: 53 HAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYD 112
H GY+S++ +S+ +I+ Y+ G + ARK FD +P+RN+VSWT+MI GY NG
Sbjct: 99 HQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNA 158
Query: 113 ENALLVFSAML------RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENL 166
+A+ +F +L + + S + AC+R+ I + K F +
Sbjct: 159 LDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGV 218
Query: 167 FVKSALLDLYAKC--GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMM 224
V + LLD YAK G + A +F++I KD VS+N+++ A G ++++F +FR ++
Sbjct: 219 SVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLV 278
Query: 225 RQGMKP-DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
+ + + TL ++L A L IHD +I++GLE + S+ID+Y K G +
Sbjct: 279 KNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRV 338
Query: 284 RSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNI 343
+A + + M ++ S TA+I+G+ H+ +A +LF MI + + + +L
Sbjct: 339 ETARKAFDRMKNKNVRSWTAMIAGYGM-HGHAAKALELFPAMIDSGVRPNYITFVSVLAA 397
Query: 344 CANVASLNLG--RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK-NV 400
C++ A L++ R +A ++ ++D+ ++G + A M K +
Sbjct: 398 CSH-AGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDS 456
Query: 401 ISWTSLIAGYAKH 413
I W+SL+A H
Sbjct: 457 IIWSSLLAACRIH 469
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 154/286 (53%), Gaps = 5/286 (1%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGD--VLSA 84
LD +S++ C A+ IH+ +I G++ + + ++ YAK G+ V A
Sbjct: 180 FLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVA 239
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA-NQFTYSSALRACAR 143
RK FD++ +++ VS+ +++S YAQ+G A VF ++++ V N T S+ L A +
Sbjct: 240 RKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSH 299
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
L+ G+ I + + +++ V ++++D+Y KCG +E A F+R++ K+V SW AM
Sbjct: 300 SGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAM 359
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLG 262
I G M G + LF +M+ G++P+ T S+L A S G+ + + + + G
Sbjct: 360 IAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFG 419
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALISG 307
+E + G ++D+ + G ++ AY L + M +K D I ++L++
Sbjct: 420 VEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 183/567 (32%), Positives = 297/567 (52%), Gaps = 8/567 (1%)
Query: 20 SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIF--YAK 77
S SC TL D T+ +LL C D + +HA + G+++N L+ ++ Y +
Sbjct: 139 SSSC--TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCE 196
Query: 78 VGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSA 137
V + A F+ +PE++ V++ +I+GY ++G ++ +F M +SG + + FT+S
Sbjct: 197 VRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGV 256
Query: 138 LRACARMRWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKD 196
L+A + G+ + S+ G F + V + +LD Y+K + + +LF+ + D
Sbjct: 257 LKAVVGLHDFALGQQLHALSVTTG-FSRDASVGNQILDFYSKHDRVLETRMLFDEMPELD 315
Query: 197 VVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHD 256
VS+N +I + + S FR M G F ++L + L Q+H
Sbjct: 316 FVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHC 375
Query: 257 LIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSK 316
+ +S + SL+D+YAK A +++S+ + +S TALISG+ + H
Sbjct: 376 QALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGA 435
Query: 317 EAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALI 376
LF M + D +L A+ ASL LG+Q+HAF + + + G+ L+
Sbjct: 436 -GLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLV 494
Query: 377 DMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDV 436
DMYAK G I DA + F+EM D+N +SW +LI+ +A +G G AI + KM G+ P+ V
Sbjct: 495 DMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSV 554
Query: 437 TFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQ 496
+ L +L ACSH G +G E F M Y I P+ +H++C++DL R G+ A ++ +
Sbjct: 555 SILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDE 614
Query: 497 MNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEP-EKSVNYVVLSNIYTAAGAWDN 555
M +P +WS++L AC I+ N SL E AA LF ME + YV +SNIY AAG W+
Sbjct: 615 MPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEK 674
Query: 556 ARKTRKLMEERSLRKNPGYSFLQSSKK 582
R +K M ER ++K P YS+++ + K
Sbjct: 675 VRDVKKAMRERGIKKVPAYSWVEVNHK 701
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 138/466 (29%), Positives = 230/466 (49%), Gaps = 15/466 (3%)
Query: 67 LSTKVIIF-YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
+ST +I + K GDV SAR FD MP+R VV+WT ++ YA+N + + A +F M RS
Sbjct: 80 VSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRS 139
Query: 126 G--VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLF--VKSALLDLYAKCGW 181
+ T+++ L C + K F N F V + LL Y +
Sbjct: 140 SSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRR 199
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
++ A +LFE I KD V++N +I G G +S LF M + G +P FT +L+A
Sbjct: 200 LDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC 301
VG + Q+H L + G + ++D Y+K+ + L+ M + D +S
Sbjct: 260 VVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSY 319
Query: 302 TALISGFARDDNHSKEAFDLFKDMILKKMGID--DVILCLMLNICANVASLNLGRQIHAF 359
+IS +++ D + + + F++M + MG D + ML+I AN++SL +GRQ+H
Sbjct: 320 NVVISSYSQADQY-EASLHFFREM--QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQ 376
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
A + VGN+L+DMYAK +A F + + +SWT+LI+GY + G
Sbjct: 377 ALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG 436
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD 479
++L+ KM+ + + TF ++L A + G +L +I L S +VD
Sbjct: 437 LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGN-LENVFSGSGLVD 495
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
++A+ G ++ A + +M + S W+A++ A + G+ GE A
Sbjct: 496 MYAKCGSIKDAVQVFEEMPDRNAVS-WNALISAHADNGD---GEAA 537
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 165/355 (46%), Gaps = 15/355 (4%)
Query: 164 ENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM 223
+N + ++ + K G + A LF+ + + VV+W ++G A D++F LFR M
Sbjct: 77 KNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQM 136
Query: 224 MRQG--MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS--LIDVYAK 279
R PD T ++L + + Q+H +KLG +++ LT S L+ Y +
Sbjct: 137 CRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCE 196
Query: 280 YGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCL 339
+ A L+ + + D ++ LI+G+ +D ++ E+ LF M D
Sbjct: 197 VRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYT-ESIHLFLKMRQSGHQPSDFTFSG 255
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN 399
+L + LG+Q+HA + S DA+VGN ++D Y+K + + FDEM + +
Sbjct: 256 VLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELD 315
Query: 400 VISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFT 459
+S+ +I+ Y++ ++ +++M+ G + F ++L ++ G +L
Sbjct: 316 FVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHC 375
Query: 460 DMINKYRILPRAEHF----SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
+L A+ + +VD++A+ E A + + + + T S W+A++
Sbjct: 376 QA-----LLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVS-WTALI 424
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 54/126 (42%), Gaps = 33/126 (26%)
Query: 354 RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN-------------- 399
R++ A K D N +++ + G+++ A + +DEM KN
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 400 -----------------VISWTSLIAGYAKHGYGHEAIELYKKMKHEG--MVPNDVTFLS 440
V++WT L+ YA++ + EA +L+++M +P+ VTF +
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 441 LLFACS 446
LL C+
Sbjct: 153 LLPGCN 158
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 178/522 (34%), Positives = 283/522 (54%), Gaps = 4/522 (0%)
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSA 121
SN+ + ++ Y K G + +AR+ F MP R+ V++ AM+ G ++ G AL +F+A
Sbjct: 172 HSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAA 231
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
M R G+ A +FT+S+ L + L GR + G + + N+FV ++LLD Y+KC
Sbjct: 232 MRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVARAT-SSNVFVNNSLLDFYSKCDC 290
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
+++ LF + +D VS+N MI G A LFR M S+L
Sbjct: 291 LDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSV 350
Query: 242 SVGGIELMKIS-QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
+ G + + I QIH ++ LGL S + + +LID+Y+K G + +A + + +S
Sbjct: 351 A-GSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVS 409
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
TA+I+G ++ +EA LF M + D + +N+A + LGRQ+H++
Sbjct: 410 WTAMITGCVQN-GQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYL 468
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
+ G+AL+DMY K G + +A + FDEM ++N ISW ++I+ YA +G AI
Sbjct: 469 IRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAI 528
Query: 421 ELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDL 480
++++ M G P+ VTFLS+L ACSH GL E + F M +Y I P EH+SCV+D
Sbjct: 529 KMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDT 588
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNY 540
R G+ + M+ +M + +WS+IL +C +GN L +AA LF M + Y
Sbjct: 589 LGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATPY 648
Query: 541 VVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
V+LSNI+ AG W++A +K+M +R LRK GYS+++ K
Sbjct: 649 VILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEVKHK 690
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 139/509 (27%), Positives = 247/509 (48%), Gaps = 29/509 (5%)
Query: 26 TLLDPSTYMS--LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS 83
T DP+TY LL I QA + + + +N +++ Y++ G + +
Sbjct: 28 TGFDPATYRLNLLLHSLISSGRLAQARALFDQM---PHRNNAFSLNRMLSGYSRSGQLSA 84
Query: 84 ARKAFDRMPE--RNVVSWTAMISGYAQ--NGYDENALLVFSAMLRSGVRANQFTYSSALR 139
A F P R+ V+WT MI +A +A+ +F MLR GV ++ T ++ L
Sbjct: 85 AHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVATVLN 144
Query: 140 ACARMRWLQGGRMIQG----SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERK 195
+I +++ G N+ V + LLD Y K G + A +F+ + +
Sbjct: 145 LPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHR 204
Query: 196 DVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIH 255
D V++NAM+ G + +G + ++ LF +M R+G+ FT ++L + G +L Q+H
Sbjct: 205 DSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVH 264
Query: 256 DLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHS 315
L+ + S+ + SL+D Y+K + +L+ M++ D +S +I+G+A + S
Sbjct: 265 GLVAR-ATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCAS 323
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNAL 375
LF++M + +L++ +V + +G+QIHA S + VGNAL
Sbjct: 324 I-VLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNAL 382
Query: 376 IDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND 435
IDMY+K G + A F DK +SWT++I G ++G EA++L+ M+ G+ P+
Sbjct: 383 IDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDR 442
Query: 436 VTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV------VDLFARRGQLES 489
TF S + A S+ + G +L + +I R+ H S V +D++ + G L+
Sbjct: 443 ATFSSTIKASSNLAMIGLGRQLHSYLI-------RSGHMSSVFSGSALLDMYTKCGCLDE 495
Query: 490 AYNMIRQMNIKPTASLWSAILGACSIYGN 518
A +M + + S W+A++ A + YG
Sbjct: 496 ALQTFDEMPERNSIS-WNAVISAYAHYGQ 523
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 107/190 (56%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IHA ++ G S + +I Y+K G + +A+ F ++ VSWTAMI+G QNG
Sbjct: 363 IHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQ 422
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
E AL +F M R+G+ ++ T+SS ++A + + + GR + + + + ++F SA
Sbjct: 423 QEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSA 482
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
LLD+Y KCG +++A F+ + ++ +SWNA+I A G ++ +F M+ G KPD
Sbjct: 483 LLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPD 542
Query: 232 CFTLGSILRA 241
T S+L A
Sbjct: 543 SVTFLSVLSA 552
>gi|356497951|ref|XP_003517819.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Glycine max]
Length = 828
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 184/555 (33%), Positives = 281/555 (50%), Gaps = 4/555 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T +S+ + C R A +H ++I + L +I+ Y + + A+ F
Sbjct: 202 DSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDASLRNSLIVMYGQCSYLRGAKGMF 261
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ + + + WT+MIS QNG E A+ F M S V N T S L CAR+ WL+
Sbjct: 262 ESVSDPSTACWTSMISSCNQNGCFEEAIDAFKKMQESEVEVNAVTMISVLCCCARLGWLK 321
Query: 149 GGRMIQGSIQKGRF-VENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ + I + +L + AL+D YA C I L I VVSWN +I
Sbjct: 322 EGKSVHCFILRREMDGADLDLGPALMDFYAACWKISSCEKLLCLIGNSSVVSWNTLISIY 381
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A +G N+++ LF M+ +G+ PD F+L S + A G + QIH + K G +
Sbjct: 382 AREGLNEEAMVLFVCMLEKGLMPDSFSLASSISACAGASSVRFGQQIHGHVTKRGF-ADE 440
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ SL+D+Y+K G + AY ++ + + I++ +I GF+++ S EA LF +M
Sbjct: 441 FVQNSLMDMYSKCGFVDLAYTIFDKIWEKSIVTWNCMICGFSQN-GISVEALKLFDEMCF 499
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
M I++V + C+N L G+ IH D + AL+DMYAK G++
Sbjct: 500 NCMDINEVTFLSAIQACSNSGYLLKGKWIHHKLVVSGVQKDLYIDTALVDMYAKCGDLKT 559
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A F+ M +K+V+SW+++IA Y HG A L+ KM + PN+VTF+++L AC H
Sbjct: 560 AQGVFNSMPEKSVVSWSAMIAAYGIHGQITAATTLFTKMVESHIKPNEVTFMNILSACRH 619
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
G EG F M Y I+P AEHF+ +VDL +R G ++ AY +I+ AS+W
Sbjct: 620 AGSVEEGKFYFNSM-RDYGIVPNAEHFASIVDLLSRAGDIDGAYEIIKSTCQHIDASIWG 678
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
A+L C I+G L + L ++ + Y +LSNIY G W +RK R ME
Sbjct: 679 ALLNGCRIHGRMDLIHNIHKELREIRTNDTGYYTLLSNIYAEGGNWYESRKVRSRMEGMG 738
Query: 568 LRKNPGYSFLQSSKK 582
L+K PGYS ++ K
Sbjct: 739 LKKVPGYSSIEIDDK 753
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 138/506 (27%), Positives = 257/506 (50%), Gaps = 19/506 (3%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H I+ G ++ + T ++ Y ++G + ARK FD + R++VSW+++++ Y +NG
Sbjct: 124 VHGRIVKTGLGTDHVIGTSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVACYVENGR 183
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
L + M+ GV + T S AC ++ L+ + + G + + + ++++
Sbjct: 184 PREGLEMLRWMVSEGVGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDASLRNS 243
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+ +Y +C ++ A +FE + W +MI G +++ F+ M ++ +
Sbjct: 244 LIVMYGQCSYLRGAKGMFESVSDPSTACWTSMISSCNQNGCFEEAIDAFKKMQESEVEVN 303
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN-KLTGSLIDVYAKYGSIRSAYQLY 290
T+ S+L L + +H I++ ++ ++ L +L+D YA I S +L
Sbjct: 304 AVTMISVLCCCARLGWLKEGKSVHCFILRREMDGADLDLGPALMDFYAACWKISSCEKLL 363
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
+ + ++S LIS +AR + ++EA LF M+ K + D L ++ CA +S+
Sbjct: 364 CLIGNSSVVSWNTLISIYAR-EGLNEEAMVLFVCMLEKGLMPDSFSLASSISACAGASSV 422
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
G+QIH K + D V N+L+DMY+K G + A FD++ +K++++W +I G+
Sbjct: 423 RFGQQIHGHVTK-RGFADEFVQNSLMDMYSKCGFVDLAYTIFDKIWEKSIVTWNCMICGF 481
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG-W---ELFTDMINKYR 466
+++G EA++L+ +M M N+VTFLS + ACS++G +G W +L + K
Sbjct: 482 SQNGISVEALKLFDEMCFNCMDINEVTFLSAIQACSNSGYLLKGKWIHHKLVVSGVQKDL 541
Query: 467 ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAA 526
+ A +VD++A+ G L++A + M K S WSA++ A I+G + AA
Sbjct: 542 YIDTA-----LVDMYAKCGDLKTAQGVFNSMPEKSVVS-WSAMIAAYGIHGQIT----AA 591
Query: 527 RNLFDMEPEKSV--NYVVLSNIYTAA 550
LF E + N V NI +A
Sbjct: 592 TTLFTKMVESHIKPNEVTFMNILSAC 617
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 130/508 (25%), Positives = 249/508 (49%), Gaps = 25/508 (4%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
YM L + C ++ Q +HAH++ G S+ STK++ YA++G + S+R F+ P
Sbjct: 4 YMPLFRSCSTLRSLSQ---LHAHLVVTGLHSDPLASTKLLESYARMGSLHSSRLVFETHP 60
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQ---FTYSSALRACARMRWLQG 149
+ + +I Y + + + ++ ++ G R Q F Y S ++A + + L
Sbjct: 61 SPDSFMFGVLIKCYLWHHLFDQVVSLYHHHIQKGSRLTQNCTFLYPSVIKAISVVGGLVV 120
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
GR + G I K + + ++LL +Y + G + DA +F+ I +D+VSW++++
Sbjct: 121 GRKVHGRIVKTGLGTDHVIGTSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVACYVE 180
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS--VGGIELMKISQIHDLIIKLGLESSN 267
G + + R M+ +G+ PD T+ S+ A VG + L K +H +I+ +
Sbjct: 181 NGRPREGLEMLRWMVSEGVGPDSVTMLSVAEACGKVGCLRLAK--SVHGYVIRKEMAGDA 238
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
L SLI +Y + +R A ++ S+ T++IS + +EA D FK M
Sbjct: 239 SLRNSLIVMYGQCSYLRGAKGMFESVSDPSTACWTSMISS-CNQNGCFEEAIDAFKKMQE 297
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ-SSYDAAVGNALIDMYAKSGEIA 386
++ ++ V + +L CA + L G+ +H F + + D +G AL+D YA +I+
Sbjct: 298 SEVEVNAVTMISVLCCCARLGWLKEGKSVHCFILRREMDGADLDLGPALMDFYAACWKIS 357
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
+ +G+ +V+SW +LI+ YA+ G EA+ L+ M +G++P+ + S + AC+
Sbjct: 358 SCEKLLCLIGNSSVVSWNTLISIYAREGLNEEAMVLFVCMLEKGLMPDSFSLASSISACA 417
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHF--SCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
G ++ + + A+ F + ++D++++ G ++ AY + ++ K +
Sbjct: 418 GASSVRFGQQIHGHVTKR----GFADEFVQNSLMDMYSKCGFVDLAYTIFDKIWEKSIVT 473
Query: 505 LWSAILGACSIYGNTSLG-ELAARNLFD 531
W+ C I G + G + A LFD
Sbjct: 474 -WN-----CMICGFSQNGISVEALKLFD 495
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 143/302 (47%), Gaps = 8/302 (2%)
Query: 248 LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG 307
L +SQ+H ++ GL S + L++ YA+ GS+ S+ ++ + D LI
Sbjct: 14 LRSLSQLHAHLVVTGLHSDPLASTKLLESYARMGSLHSSRLVFETHPSPDSFMFGVLIKC 73
Query: 308 FARDDNHSKEAFDLFKDMILKKMGIDDVILCL---MLNICANVASLNLGRQIHAFAFKYQ 364
+ + + L+ I K + L ++ + V L +GR++H K
Sbjct: 74 YLWH-HLFDQVVSLYHHHIQKGSRLTQNCTFLYPSVIKAISVVGGLVVGRKVHGRIVKTG 132
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
D +G +L+ MY + G ++DA + FDE+ ++++SW+S++A Y ++G E +E+ +
Sbjct: 133 LGTDHVIGTSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVACYVENGRPREGLEMLR 192
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
M EG+ P+ VT LS+ AC G + +I K + A + ++ ++ +
Sbjct: 193 WMVSEGVGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRK-EMAGDASLRNSLIVMYGQC 251
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLS 544
L A M ++ P+ + W++++ +C+ G A + + E E VN V +
Sbjct: 252 SYLRGAKGMFESVS-DPSTACWTSMISSCNQNGCFEEAIDAFKKM--QESEVEVNAVTMI 308
Query: 545 NI 546
++
Sbjct: 309 SV 310
>gi|147834193|emb|CAN75306.1| hypothetical protein VITISV_040403 [Vitis vinifera]
Length = 826
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 176/535 (32%), Positives = 289/535 (54%), Gaps = 3/535 (0%)
Query: 46 ERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISG 105
E +I +I G+ES + ++T +I FY+ D+ K F++ P +++V W+AM+S
Sbjct: 105 EDMMRVICGSVIKLGFESEVSVATALIGFYSDY-DMGIVWKIFNQTPIKDLVLWSAMVSA 163
Query: 106 YAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVEN 165
++G A +F AM GV N + S L ACA + L G+ I G K F
Sbjct: 164 CVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIKKMFHPL 223
Query: 166 LFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR 225
V ++L+D+YAKC + + ++F++I KD++SW +I G ++F F M
Sbjct: 224 TNVHNSLVDMYAKCRNFKASMLVFDQILEKDLISWTTIIRGCIENDCPREAFKAFSRMQF 283
Query: 226 QGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRS 285
D + ++ A + E H ++K GL + + +L+ +YAK+G + S
Sbjct: 284 SCFGADETIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAFVSIGTALLQMYAKFGELES 343
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
A ++ + K D IS +A+IS A H A + FK M +++ +L C+
Sbjct: 344 AIIVFDQLNKKDYISWSAMISVHAHS-RHPYNALETFKQMQSTDERPNEITFVSLLQACS 402
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
+ + LG I A A K +A + +ALID+Y K G I F+E+ K+++ W+S
Sbjct: 403 LIGAQELGESIQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEIPTKDLVCWSS 462
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
+I GY +G G EA+E + M G+ PN+V F+S+L ACSH GL EGW F+ M KY
Sbjct: 463 MINGYGLNGCGDEALETFSNMLACGVKPNEVVFISVLSACSHCGLEHEGWSCFSSMEQKY 522
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGAC-SIYGNTSLGEL 524
I+P+ H++C+VDL +RRG +E A + +M ++P +W A+L C S +G+ + EL
Sbjct: 523 GIIPKLPHYACMVDLISRRGNIEGALQFVNKMPMEPDKRIWGALLAGCRSTHGSIEIAEL 582
Query: 525 AARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQS 579
A L ++P+ + YV+LSN+Y G W + + RKL++E+ L+K GYS +++
Sbjct: 583 VAERLIGLDPQNTSYYVILSNLYAEQGRWGDVERLRKLVDEKGLKKEMGYSMIEA 637
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 135/457 (29%), Positives = 223/457 (48%), Gaps = 16/457 (3%)
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
NV+SWT+ IS + E A+ +F ML + R N T S +RA + + R+I
Sbjct: 53 NVISWTSKISSLVKQNQSELAVGLFKMMLMTEQRPNHVTVLSVIRAISGLGLEDMMRVIC 112
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND 214
GS+ K F + V +AL+ Y+ + W +F + KD+V W+AM+ G
Sbjct: 113 GSVIKLGFESEVSVATALIGFYSDYD-MGIVWKIFNQTPIKDLVLWSAMVSACVKSGQYG 171
Query: 215 DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLI 274
++F +FR+M G++P+ ++ SIL A L+ +IH IK + SL+
Sbjct: 172 EAFEIFRAMQYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIKKMFHPLTNVHNSLV 231
Query: 275 DVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD 334
D+YAK + +++ ++ +L+ D+IS T +I G +D +EAF F M G D+
Sbjct: 232 DMYAKCRNFKASMLVFDQILEKDLISWTTIIRGCIENDC-PREAFKAFSRMQFSCFGADE 290
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE 394
I+ ++ G H F K ++G AL+ MYAK GE+ A FD+
Sbjct: 291 TIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAFVSIGTALLQMYAKFGELESAIIVFDQ 350
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG 454
+ K+ ISW+++I+ +A + + A+E +K+M+ PN++TF+SLL ACS G G
Sbjct: 351 LNKKDYISWSAMISVHAHSRHPYNALETFKQMQSTDERPNEITFVSLLQACSLIGAQELG 410
Query: 455 WELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL--WSAILGA 512
E K L A S ++DL+ + G++ + ++ PT L WS+++
Sbjct: 411 -ESIQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEI---PTKDLVCWSSMING 466
Query: 513 CSIYGNTSLGELAARNLFDM-----EPEKSVNYVVLS 544
YG G+ A +M +P + V VLS
Sbjct: 467 ---YGLNGCGDEALETFSNMLACGVKPNEVVFISVLS 500
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 181/357 (50%), Gaps = 23/357 (6%)
Query: 165 NLFVKSALLDLYAKCGWIEDAWILFERI-----ERKDVVSWNAMIGGLAMQGFNDDSFWL 219
N+F++++ LY + + + + +E E+ +V+SW + I L Q ++ + L
Sbjct: 19 NVFIRNSAYSLYYRSMF--NTYAYYEEPVEFHGEKDNVISWTSKISSLVKQNQSELAVGL 76
Query: 220 FRSMMRQGMKPDCFTLGSILRASVG-GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYA 278
F+ M+ +P+ T+ S++RA G G+E M + I +IKLG ES + +LI Y+
Sbjct: 77 FKMMLMTEQRPNHVTVLSVIRAISGLGLEDM-MRVICGSVIKLGFESEVSVATALIGFYS 135
Query: 279 KYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILC 338
Y + ++++ D++ +A++S + + EAF++F+ M + + V +
Sbjct: 136 DY-DMGIVWKIFNQTPIKDLVLWSAMVSACVKSGQYG-EAFEIFRAMQYDGVEPNHVSIV 193
Query: 339 LMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK 398
+L CANV +L G++IH F+ K V N+L+DMYAK + FD++ +K
Sbjct: 194 SILPACANVGALLFGKEIHGFSIKKMFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEK 253
Query: 399 NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT-----GLTCE 453
++ISWT++I G ++ EA + + +M+ ++ L+ A G+
Sbjct: 254 DLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADETIVQDLIVAIIQADEHKFGIAFH 313
Query: 454 GWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
G+ L K +L + ++ ++A+ G+LESA + Q+N K S WSA++
Sbjct: 314 GFLL------KNGLLAFVSIGTALLQMYAKFGELESAIIVFDQLNKKDYIS-WSAMI 363
>gi|15228265|ref|NP_190368.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207726|sp|Q9STS9.1|PP268_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g47840
gi|4741201|emb|CAB41867.1| putative protein [Arabidopsis thaliana]
gi|332644818|gb|AEE78339.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 706
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 174/550 (31%), Positives = 293/550 (53%), Gaps = 1/550 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D S +L+ C +HA+ + S++++ + ++ Y +VG + + + F
Sbjct: 107 DTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVF 166
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
MP RN V+WTA+I+G G + L FS M RS ++ +T++ AL+ACA +R ++
Sbjct: 167 SEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVK 226
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ I + FV L V ++L +Y +CG ++D LFE + +DVVSW ++I
Sbjct: 227 YGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYK 286
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G + F M + P+ T S+ A L+ Q+H ++ LGL S
Sbjct: 287 RIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLS 346
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
++ S++ +Y+ G++ SA L++ M DIIS + +I G+ + +E F F M
Sbjct: 347 VSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQA-GFGEEGFKYFSWMRQS 405
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
D L +L++ N+A + GRQ+HA A + ++ V ++LI+MY+K G I +A
Sbjct: 406 GTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEA 465
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ F E +++S T++I GYA+HG EAI+L++K G P+ VTF+S+L AC+H+
Sbjct: 466 SMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHS 525
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
G G+ F M Y + P EH+ C+VDL R G+L A MI +M+ K +W+
Sbjct: 526 GQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTT 585
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L AC G+ G AA + +++P + V L+NIY++ G + A RK M+ + +
Sbjct: 586 LLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGV 645
Query: 569 RKNPGYSFLQ 578
K PG+S ++
Sbjct: 646 IKEPGWSSIK 655
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 214/419 (51%), Gaps = 11/419 (2%)
Query: 3 IVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
I+ G+ K+ L + +S + L D T+ L+ C + + IH H+I G
Sbjct: 180 IITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRG 239
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+ + L ++ + Y + G++ F+ M ER+VVSWT++I Y + G + A+ F
Sbjct: 240 FVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFI 299
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M S V N+ T++S ACA + L G + ++ ++L V ++++ +Y+ CG
Sbjct: 300 KMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCG 359
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+ A +LF+ + +D++SW+ +IGG GF ++ F F M + G KP F L S+L
Sbjct: 360 NLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLS 419
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
S + Q+H L + GLE ++ + SLI++Y+K GSI+ A ++ + DI+S
Sbjct: 420 VSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVS 479
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
TA+I+G+A + SKEA DLF+ + D V +L C + L+LG H F
Sbjct: 480 LTAMINGYA-EHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLG--FHYFN 536
Query: 361 FKYQSSYDAAVGN----ALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHG 414
Q +Y+ ++D+ ++G ++DA + +EM K+ + WT+L+ G
Sbjct: 537 M-MQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKG 594
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 139/579 (24%), Positives = 265/579 (45%), Gaps = 53/579 (9%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
+T +SLLQ +++ R ++ + ++ N HL + + G++ +AR+ FD+
Sbjct: 16 TTSISLLQKPVEENIVRISNQVMVK-----FDPNSHLRSLI-----NAGNLRAARQVFDK 65
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAM--LRSGVRANQFTYSSALRACARMRWLQ 148
MP ++VSWT++I Y + AL++FSAM + V + S L+AC + +
Sbjct: 66 MPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIA 125
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G + K + +++V S+LLD+Y + G I+ + +F + ++ V+W A+I GL
Sbjct: 126 YGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLV 185
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G + F M R D +T L+A G ++ IH +I G ++
Sbjct: 186 HAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLC 245
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ SL +Y + G ++ L+ +M + D++S T+LI + R K A + F M
Sbjct: 246 VANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVK-AVETFIKMRNS 304
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
++ ++ M + CA+++ L G Q+H + +V N+++ MY+ G + A
Sbjct: 305 QVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSA 364
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS-- 446
+ F M +++ISW+++I GY + G+G E + + M+ G P D SLL
Sbjct: 365 SVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNM 424
Query: 447 ---------HTGLTCEGWE----LFTDMINKYRILPRAEHFSCV---------------V 478
H C G E + + +IN Y + S + +
Sbjct: 425 AVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMI 484
Query: 479 DLFARRGQLESAYNMIR---QMNIKPTASLWSAILGACSIYGNTSLGEL---AARNLFDM 532
+ +A G+ + A ++ ++ +P + + ++L AC+ G LG + ++M
Sbjct: 485 NGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNM 544
Query: 533 EPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKN 571
P K +Y + ++ AG +A K++ E S +K+
Sbjct: 545 RPAKE-HYGCMVDLLCRAGRLSDA---EKMINEMSWKKD 579
>gi|357116286|ref|XP_003559913.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 692
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 175/556 (31%), Positives = 302/556 (54%), Gaps = 11/556 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLI----HAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
D TY +++ C Q ++ A ++ ++ + ++ +AK G + A
Sbjct: 141 DGFTYPPVIKACAALGVVEQGRMVRENVEADVVRGVVAPSVFVQCALVDMFAKCGCLGEA 200
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
R F+ M ER++ +WTAMI G G +A+ +FS M G A+ ++ + AC R
Sbjct: 201 RSVFESMLERDLAAWTAMIGGAVHAGDWLDAMSLFSRMRSEGFLADSVIIATVIPACGRA 260
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
+ L+ G ++ G + ++ V +AL+D+Y KCG + A +F I KDVVSW+ +I
Sbjct: 261 KELRTGMVLHGCAVRCGVGDDTCVSNALVDMYCKCGCLGMADRVFWSIGFKDVVSWSTLI 320
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLGL 263
G + G + S LF M+ G+KP+ T+ SIL S+ ++L + +IH ++ G
Sbjct: 321 AGYSQNGKDHVSVNLFTEMVTAGLKPNSNTMASIL-PSLSEMKLFRHGKEIHGFSLRNGF 379
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
+ S L + ID Y++ GSIR A + M K D++ ++++G+A + N + A F+
Sbjct: 380 DQSKFLGSAFIDFYSRQGSIREAEIVLELMPKRDLVIWNSMVAGYAVNGN-TDSALCAFR 438
Query: 324 DMILKKMGI--DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
L+K+G D V + +L +C + + L G+++HA+ ++ S +V NALIDMY K
Sbjct: 439 --ALQKVGFRPDHVTVVSVLPVCNHHSRLIQGKELHAYVVRHYMSSVCSVSNALIDMYCK 496
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
+ F + D++ ++ +LI+ + KHG+ EAI L+ MK +G+ P+ VTF++L
Sbjct: 497 CCCLEKGKEIFQLVTDRDTATYNTLISSFGKHGHEDEAIMLFDLMKRDGIAPDKVTFVAL 556
Query: 442 LFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
L +CSH GL +G + M+ Y I P EH+SCVVDL++R G+L+ A+ + + +
Sbjct: 557 LSSCSHAGLIEKGLHFYDIMLQDYNISPGKEHYSCVVDLYSRSGKLDDAWKFVSSLQDEA 616
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRK 561
+ +LGAC ++ + EL A+ +F+ P +++LSNIY AG W + + R
Sbjct: 617 EIDVLGCLLGACRVHNRMDIAELVAKRIFEQNPSDPGYHILLSNIYANAGMWSHVTRIRT 676
Query: 562 LMEERSLRKNPGYSFL 577
++E RSL+ G S +
Sbjct: 677 MIENRSLKNKTGNSLI 692
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 143/554 (25%), Positives = 275/554 (49%), Gaps = 46/554 (8%)
Query: 48 QAHLIHAHIITNGYES-NLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGY 106
+A +HA ++ G+ L+ +++ YA++G+ A D MP RN +W A I G
Sbjct: 57 EARRLHAALLVGGHHRRGAVLAAQLVHAYARLGEAGRALSVLDGMPMRNSFAWNAAIKGL 116
Query: 107 AQNGYDENALLVFSAMLRSG-VRANQFTYSSALRACARMRWLQGGRMIQGSIQ----KGR 161
+G AL + AM+R G V A+ FTY ++ACA + ++ GRM++ +++ +G
Sbjct: 117 VDSGQFAEALETYWAMVRDGSVAADGFTYPPVIKACAALGVVEQGRMVRENVEADVVRGV 176
Query: 162 FVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFR 221
++FV+ AL+D++AKCG + +A +FE + +D+ +W AMIGG G D+ LF
Sbjct: 177 VAPSVFVQCALVDMFAKCGCLGEARSVFESMLERDLAAWTAMIGGAVHAGDWLDAMSLFS 236
Query: 222 SMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYG 281
M +G D + +++ A EL +H ++ G+ ++ +L+D+Y K G
Sbjct: 237 RMRSEGFLADSVIIATVIPACGRAKELRTGMVLHGCAVRCGVGDDTCVSNALVDMYCKCG 296
Query: 282 SIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLML 341
+ A +++ S+ D++S + LI+G++++ + +LF +M+ + + + +L
Sbjct: 297 CLGMADRVFWSIGFKDVVSWSTLIAGYSQNGK-DHVSVNLFTEMVTAGLKPNSNTMASIL 355
Query: 342 NICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVI 401
+ + G++IH F+ + +G+A ID Y++ G I +A + M ++++
Sbjct: 356 PSLSEMKLFRHGKEIHGFSLRNGFDQSKFLGSAFIDFYSRQGSIREAEIVLELMPKRDLV 415
Query: 402 SWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWEL---- 457
W S++AGYA +G A+ ++ ++ G P+ VT +S+L C+H +G EL
Sbjct: 416 IWNSMVAGYAVNGNTDSALCAFRALQKVGFRPDHVTVVSVLPVCNHHSRLIQGKELHAYV 475
Query: 458 --------------FTDMINKYRILPRA-EHFSCVVDL-----------FARRGQLESA- 490
DM K L + E F V D F + G + A
Sbjct: 476 VRHYMSSVCSVSNALIDMYCKCCCLEKGKEIFQLVTDRDTATYNTLISSFGKHGHEDEAI 535
Query: 491 --YNMIRQMNIKPTASLWSAILGACSIYGNTSLG----ELAARNLFDMEPEKSVNYVVLS 544
++++++ I P + A+L +CS G G ++ ++ +++ P K +Y +
Sbjct: 536 MLFDLMKRDGIAPDKVTFVALLSSCSHAGLIEKGLHFYDIMLQD-YNISPGKE-HYSCVV 593
Query: 545 NIYTAAGAWDNARK 558
++Y+ +G D+A K
Sbjct: 594 DLYSRSGKLDDAWK 607
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 210/420 (50%), Gaps = 9/420 (2%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L D +++ C K R ++H + G + +S ++ Y K G + A +
Sbjct: 244 LADSVIIATVIPACGRAKELRTGMVLHGCAVRCGVGDDTCVSNALVDMYCKCGCLGMADR 303
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
F + ++VVSW+ +I+GY+QNG D ++ +F+ M+ +G++ N T +S L + + M+
Sbjct: 304 VFWSIGFKDVVSWSTLIAGYSQNGKDHVSVNLFTEMVTAGLKPNSNTMASILPSLSEMKL 363
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
+ G+ I G + F ++ F+ SA +D Y++ G I +A I+ E + ++D+V WN+M+ G
Sbjct: 364 FRHGKEIHGFSLRNGFDQSKFLGSAFIDFYSRQGSIREAEIVLELMPKRDLVIWNSMVAG 423
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
A+ G D + FR++ + G +PD T+ S+L L++ ++H +++ + S
Sbjct: 424 YAVNGNTDSALCAFRALQKVGFRPDHVTVVSVLPVCNHHSRLIQGKELHAYVVRHYMSSV 483
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
++ +LID+Y K + ++++ + D + LIS F + H EA LF M
Sbjct: 484 CSVSNALIDMYCKCCCLEKGKEIFQLVTDRDTATYNTLISSFGK-HGHEDEAIMLFDLMK 542
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG----NALIDMYAKS 382
+ D V +L+ C++ + G +H + Q Y+ + G + ++D+Y++S
Sbjct: 543 RDGIAPDKVTFVALLSSCSHAGLIEKG--LHFYDIMLQ-DYNISPGKEHYSCVVDLYSRS 599
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
G++ DA + + D+ I + G + + EL K E P+D + LL
Sbjct: 600 GKLDDAWKFVSSLQDEAEIDVLGCLLGACRVHNRMDIAELVAKRIFE-QNPSDPGYHILL 658
>gi|359489798|ref|XP_002274780.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 804
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 177/542 (32%), Positives = 289/542 (53%), Gaps = 3/542 (0%)
Query: 46 ERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISG 105
E +I +I G+ES + ++T +I FY+ D+ K F++ P +++V W+AM+S
Sbjct: 26 EDMMRVICGSVIKLGFESEVSVATALIGFYSDY-DMGIVWKIFNQTPIKDLVLWSAMVSA 84
Query: 106 YAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVEN 165
++G A +F AM GV N + S L ACA + L G+ I G K F
Sbjct: 85 CVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIKKMFHPL 144
Query: 166 LFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR 225
V ++L+D+YAKC + + ++F++I KD++SW +I G ++F F M
Sbjct: 145 TNVHNSLVDMYAKCRNFKASMLVFDQILEKDLISWTTIIRGCIENDCPREAFKAFSRMQF 204
Query: 226 QGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRS 285
D + ++ A + E H ++K GL + + +L+ +YAK+G + S
Sbjct: 205 SCFGADETIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAFVSIGTALLQMYAKFGELES 264
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
A ++ + K D IS +A+IS A H A + FK M +++ +L C+
Sbjct: 265 AIIVFDQLNKKDYISWSAMISVHAHS-RHPYNALETFKQMQSTDERPNEITFVSLLQACS 323
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
+ + LG I A A K +A + +ALID+Y K G I F+E+ K+++ W+S
Sbjct: 324 LIGAQELGESIQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEIPTKDLVCWSS 383
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
+I GY +G G EA+E + M G+ PN+V F+S+L ACSH GL EGW F+ M KY
Sbjct: 384 MINGYGLNGCGDEALETFSNMLACGVKPNEVVFISVLSACSHCGLEHEGWSCFSSMEQKY 443
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGAC-SIYGNTSLGEL 524
I+P+ H++C+VDL +RRG +E A + +M ++P +W A+L C S +G+ + EL
Sbjct: 444 GIIPKLPHYACMVDLISRRGNIEGALQFVNKMPMEPDKRIWGALLAGCRSTHGSIEIAEL 503
Query: 525 AARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKNI 584
A L ++P+ + YV+LSN+Y G W + + RKL++E+ L+K GY L +
Sbjct: 504 VAERLIGLDPQNTSYYVILSNLYAEQGRWGDVERLRKLVDEKGLKKEMGYKPLHRPTAAL 563
Query: 585 LL 586
L+
Sbjct: 564 LM 565
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 125/430 (29%), Positives = 208/430 (48%), Gaps = 16/430 (3%)
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
ML + R N T S +RA + + R+I GS+ K F + V +AL+ Y+
Sbjct: 1 MLMTEQRPNHVTVLSVIRAISGLGLEDMMRVICGSVIKLGFESEVSVATALIGFYSDYD- 59
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
+ W +F + KD+V W+AM+ G ++F +FR+M G++P+ ++ SIL A
Sbjct: 60 MGIVWKIFNQTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPA 119
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC 301
L+ +IH IK + SL+D+YAK + +++ ++ +L+ D+IS
Sbjct: 120 CANVGALLFGKEIHGFSIKKMFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEKDLISW 179
Query: 302 TALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF 361
T +I G +D +EAF F M G D+ I+ ++ G H F
Sbjct: 180 TTIIRGCIENDC-PREAFKAFSRMQFSCFGADETIVQDLIVAIIQADEHKFGIAFHGFLL 238
Query: 362 KYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIE 421
K ++G AL+ MYAK GE+ A FD++ K+ ISW+++I+ +A + + A+E
Sbjct: 239 KNGLLAFVSIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYNALE 298
Query: 422 LYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLF 481
+K+M+ PN++TF+SLL ACS G E E K L A S ++DL+
Sbjct: 299 TFKQMQSTDERPNEITFVSLLQACSLIGAQ-ELGESIQAHATKAGYLSNAFLSSALIDLY 357
Query: 482 ARRGQLESAYNMIRQMNIKPTASL--WSAILGACSIYGNTSLGELAARNLFDM-----EP 534
+ G++ + ++ PT L WS+++ YG G+ A +M +P
Sbjct: 358 CKFGRINQGRAIFNEI---PTKDLVCWSSMING---YGLNGCGDEALETFSNMLACGVKP 411
Query: 535 EKSVNYVVLS 544
+ V VLS
Sbjct: 412 NEVVFISVLS 421
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 176/549 (32%), Positives = 285/549 (51%), Gaps = 34/549 (6%)
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSA 121
+ NL +++ Y+K G + F+++P+R+ V+W +I GY+ +G A+ ++
Sbjct: 69 QPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNT 128
Query: 122 MLRS-GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK-- 178
M+R + T + L+ + + G+ I G + K F L V S LL +YA
Sbjct: 129 MMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVG 188
Query: 179 -----------------------------CGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
CG IEDA LF +E KD VSW AMI GLA
Sbjct: 189 CISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQ 247
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
G ++ FR M QG+K D + GS+L A G + + QIH II+ + +
Sbjct: 248 NGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYV 307
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+LID+Y K + A ++ M + +++S TA++ G+ + ++EA +F DM
Sbjct: 308 GSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQT-GRAEEAVKIFLDMQRSG 366
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ D L ++ CANV+SL G Q H A + V N+L+ +Y K G+I D+
Sbjct: 367 IDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDST 426
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
R F+EM ++ +SWT++++ YA+ G E I+L+ KM G+ P+ VT ++ ACS G
Sbjct: 427 RLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAG 486
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
L +G F M ++Y I+P H+SC++DLF+R G+LE A I M P A W+ +
Sbjct: 487 LVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTL 546
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
L AC GN +G+ AA +L +++P Y +LS+IY + G WD+ + R+ M E++++
Sbjct: 547 LSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVK 606
Query: 570 KNPGYSFLQ 578
K PG S+++
Sbjct: 607 KEPGQSWIK 615
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/419 (28%), Positives = 201/419 (47%), Gaps = 41/419 (9%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T M++L+ IH +I G+ES L + + ++ YA VG + A+K F +
Sbjct: 141 TLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGL 200
Query: 92 PERNV------------------------------VSWTAMISGYAQNGYDENALLVFSA 121
+RN VSW AMI G AQNG + A+ F
Sbjct: 201 DDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFRE 260
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
M G++ +Q+ + S L AC + + G+ I I + F ++++V SAL+D+Y KC
Sbjct: 261 MKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKC 320
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
+ A +F+R+++K+VVSW AM+ G G +++ +F M R G+ PD +TLG + A
Sbjct: 321 LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISA 380
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC 301
L + SQ H I GL ++ SL+ +Y K G I + +L+ M D +S
Sbjct: 381 CANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSW 440
Query: 302 TALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF 361
TA++S +A+ + E LF M+ + D V L +++ C+ + G++ F
Sbjct: 441 TAMVSAYAQ-FGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRY----F 495
Query: 362 KYQSSYDAAVG-----NALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHG 414
K +S V + +ID++++SG + +A R + M + I WT+L++ G
Sbjct: 496 KLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG 554
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 143/281 (50%), Gaps = 2/281 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D + S+L C A + IHA II ++ ++++ + +I Y K + A+
Sbjct: 268 MDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTV 327
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FDRM ++NVVSWTAM+ GY Q G E A+ +F M RSG+ + +T A+ ACA + L
Sbjct: 328 FDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSL 387
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G G + + V ++L+ LY KCG I+D+ LF + +D VSW AM+
Sbjct: 388 EEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAY 447
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLII-KLGLESS 266
A G ++ LF M++ G+KPD TL ++ A + K + L+ + G+ S
Sbjct: 448 AQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPS 507
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALIS 306
+ID++++ G + A + M D I T L+S
Sbjct: 508 IGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 124/487 (25%), Positives = 214/487 (43%), Gaps = 88/487 (18%)
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDV------------- 197
+MI G+I + F+ + ++ YA A +F+RI + ++
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 198 ------------------VSWNAMIGGLAMQGFNDDSFWLFRSMMRQ-GMKPDCFTLGSI 238
V+WN +I G ++ G + + +MMR TL ++
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTM 145
Query: 239 LR--ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGS-------------- 282
L+ +S G + L K QIH +IKLG ES + L+ +YA G
Sbjct: 146 LKLSSSNGHVSLGK--QIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDR 203
Query: 283 -----------------IRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
I A QL+R M K D +S A+I G A+ + +KEA + F++M
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGMEK-DSVSWAAMIKGLAQ-NGLAKEAIECFREM 261
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
++ + +D +L C + ++N G+QIHA + VG+ALIDMY K +
Sbjct: 262 KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCL 321
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A FD M KNV+SWT+++ GY + G EA++++ M+ G+ P+ T + AC
Sbjct: 322 HYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISAC 381
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCV----VDLFARRGQLESAYNMIRQMNIKP 501
++ EG + I I H+ V V L+ + G ++ + + +MN++
Sbjct: 382 ANVSSLEEGSQFHGKAITSGLI-----HYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRD 436
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSV--NYVVLSNIYTA---AGAWDNA 556
S W+A++ A + +G + LFD + + + V L+ + +A AG +
Sbjct: 437 AVS-WTAMVSAYAQFGRA----VETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKG 491
Query: 557 RKTRKLM 563
++ KLM
Sbjct: 492 QRYFKLM 498
>gi|212275047|ref|NP_001130303.1| uncharacterized protein LOC100191397 [Zea mays]
gi|194688792|gb|ACF78480.1| unknown [Zea mays]
Length = 706
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 181/560 (32%), Positives = 286/560 (51%), Gaps = 48/560 (8%)
Query: 28 LDPSTYMSLLQFCIDK--------KAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVG 79
+DP S+L C +A + A IHA ++ G+ S+ H+ ++ YAK
Sbjct: 140 VDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGM 199
Query: 80 DVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALR 139
+ A K F+ + ++VSW +I+GY Q G E A+ V M SG N+ TYS+ L
Sbjct: 200 KMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLA 259
Query: 140 ACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS 199
+C + R + R +F++I + V +
Sbjct: 260 SCIKARDVPSARA-----------------------------------MFDKIPKPSVTT 284
Query: 200 WNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS--VGGIELMKISQIHDL 257
WN ++ G + + ++ LFR M Q ++PD TL IL + +G EL K Q+H
Sbjct: 285 WNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGK--QVHSA 342
Query: 258 IIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKE 317
++L L + + LID+Y+K G + A ++ M + D++ ++ISG A + S+E
Sbjct: 343 SVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSMISGLAIH-SLSEE 401
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
AFD K M M + M+N+CA ++S+ GRQ+HA K + VG +LID
Sbjct: 402 AFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGCSLID 461
Query: 378 MYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVT 437
MYAKSG + DA F+ M KN+++W +I GYA++G+G +A+EL++ M P+ VT
Sbjct: 462 MYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVT 521
Query: 438 FLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
F+++L CSH+GL E F M + Y I P EH++C++D AR + +I +M
Sbjct: 522 FIAVLTGCSHSGLVDEAVTFFNSMESNYGITPLVEHYTCLIDALARAARFAEVEAVIGKM 581
Query: 498 NIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNAR 557
K LW +L AC ++ N LGE +A++LF ++P+ YV+LSNIY G +A
Sbjct: 582 PYKDDPILWEVLLAACVVHHNAELGEFSAKHLFRLDPKNPSPYVLLSNIYATLGRHGDAS 641
Query: 558 KTRKLMEERSLRKNPGYSFL 577
R LM R + K GYS++
Sbjct: 642 AVRALMSSRGVVKGRGYSWV 661
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 143/553 (25%), Positives = 249/553 (45%), Gaps = 86/553 (15%)
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
MP+RN VSW +I+ A++G AL ++ ML+ G+ FT +S L AC + L G
Sbjct: 1 MPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDG 60
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
R G K + FV++ LL +Y KCG + DA LF+ + + VS+ AM+GGLA
Sbjct: 61 RRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQG 120
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSIL----RASVGGIELMKISQ----IHDLIIKLG 262
G DD+ LF M R G++ D + S+L +A G + + Q IH L+++ G
Sbjct: 121 GAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKG 180
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGF-------------- 308
S + SL+D+YAK + A +++ S+ I+S LI+G+
Sbjct: 181 FGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLE 240
Query: 309 -----------------------ARDDNHSKEAFD------------------------- 320
ARD ++ FD
Sbjct: 241 FMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQE 300
Query: 321 ---LFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
LF+ M + + D L ++L+ C+ + + LG+Q+H+ + + D V + LID
Sbjct: 301 TIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLID 360
Query: 378 MYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVT 437
+Y+K G++ A F+ M +++V+ W S+I+G A H EA + K+M+ GM P + +
Sbjct: 361 IYSKCGQVGIALIIFNMMTERDVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESS 420
Query: 438 FLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSC-VVDLFARRGQLESAYNMIRQ 496
+ S++ C+ +G ++ ++ + + C ++D++A+ G ++ A
Sbjct: 421 YASMINLCARLSSIPQGRQMHAQVLKDG--YDQNVYVGCSLIDMYAKSGNMDDARLFFNC 478
Query: 497 MNIKPTASLWSAILGACSIYGNTSLGELAARNLFDM-----EPEKSVNYVVLSNIYTAAG 551
M +K + W+ ++ Y GE A LF+ + SV ++ + + +G
Sbjct: 479 MIVKNLVA-WNEMIHG---YAQNGFGEKAVE-LFEYMLTTKQKPDSVTFIAVLTGCSHSG 533
Query: 552 AWDNARKTRKLME 564
D A ME
Sbjct: 534 LVDEAVTFFNSME 546
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 165/504 (32%), Positives = 280/504 (55%), Gaps = 36/504 (7%)
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
YAK G + + + FDRMP R+ VS+ I+G++ N + +L +F M R G ++T
Sbjct: 99 YAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTI 158
Query: 135 SSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER 194
S L A A++ L+ G+ I GSI F+ N+F+ +AL D+YAKCG IE A LF+ + +
Sbjct: 159 VSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTK 218
Query: 195 KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQI 254
K++VSWN MI G A G + L M G PD T+ +I+ A
Sbjct: 219 KNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA------------- 265
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH 314
Y + G + A +++ + DI+ TA++ G+A++
Sbjct: 266 ----------------------YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKN-GR 302
Query: 315 SKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNA 374
++A LF +M+L+ + D L +++ CA +ASL+ G+ +H + + + V +A
Sbjct: 303 EEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSA 362
Query: 375 LIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
LIDMY+K G I DA F+ M +NV+SW ++I G A++G+ +A+EL++ M + P+
Sbjct: 363 LIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPD 422
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI 494
+VTF+ +L AC H +G E F + N++ + P +H++C+V+L R G++E A +I
Sbjct: 423 NVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALI 482
Query: 495 RQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWD 554
+ M P +WS +L CS G+ E+AAR+LF+++P +V Y++LSN+Y + G W
Sbjct: 483 KNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWK 542
Query: 555 NARKTRKLMEERSLRKNPGYSFLQ 578
+ R LM+ ++++K G+S+++
Sbjct: 543 DVASVRNLMKSKNVKKFAGFSWIE 566
>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Vitis vinifera]
Length = 858
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 201/632 (31%), Positives = 313/632 (49%), Gaps = 81/632 (12%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS 83
PD + P+ +L+ C + +H +++ G+ + + +S+ ++ Y K G +
Sbjct: 180 PDNFVLPN----VLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLED 235
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
ARK FD M E+NVV+W +MI GY QNG ++ A+ VF M G+ + T +S L A A
Sbjct: 236 ARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASAN 295
Query: 144 MRWLQGGRMIQG---SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSW 200
+ L G+ QG +I ++N+ + S++++ Y+K G IEDA ++F R+ KDVV+W
Sbjct: 296 LDALIEGK--QGHAIAILNSLDLDNI-LGSSIINFYSKVGLIEDAELVFSRMLEKDVVTW 352
Query: 201 NAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIK 260
N +I + + M + ++ D TL SIL AS + + H I+
Sbjct: 353 NLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIR 412
Query: 261 LGLESSNKLTGSLIDV-------------------------------YAKYG----SIRS 285
LES + S+ID+ YA+ G +++
Sbjct: 413 RNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKL 472
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM-------------------- 325
YQ+ + ++IS ++I GF R+ EA D+F M
Sbjct: 473 FYQMQFDSVPPNVISWNSVILGFLRN-GQVNEAKDMFSQMQSLGFQPNLITWTTLISGLA 531
Query: 326 ----------ILKKM---GIDDVILCL--MLNICANVASLNLGRQIHAFAFKYQSSYDAA 370
+KM GI I + +L C ++ SL GR IH F +++
Sbjct: 532 QSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVP 591
Query: 371 VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG 430
V +L+DMYAK G I +A + F M K + + ++I+ YA HG EA+ L+K ++ EG
Sbjct: 592 VATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEG 651
Query: 431 MVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA 490
+ P+ +TF S+L ACSH GL EG LF DM++K+ + P EH+ CVV L +R G L+ A
Sbjct: 652 IEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEA 711
Query: 491 YNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAA 550
+I M +P A + ++L AC + LGE +++LF +EP S NYV LSN Y AA
Sbjct: 712 LRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAA 771
Query: 551 GAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
G W R LM+ R LRKNPG S++Q+ K
Sbjct: 772 GRWVEVSNMRDLMKVRGLRKNPGCSWIQTGGK 803
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 164/571 (28%), Positives = 298/571 (52%), Gaps = 16/571 (2%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG--YESN 64
K G L++++ + D + P Y LLQ C+ ++A IHA I+ NG + N
Sbjct: 56 KDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGDFFAKN 115
Query: 65 LHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLR 124
++ TK+++FYAK A + F R+ RNV SW A++ + G+ E+ALL F M
Sbjct: 116 EYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQE 175
Query: 125 SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIED 184
+GV + F + L+AC ++ + G+ + G + K F +FV S+L+D+Y KCG +ED
Sbjct: 176 NGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLED 235
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG 244
A +F+ + K+VV+WN+MI G G N ++ +F M +G++P T+ S L AS
Sbjct: 236 ARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASAN 295
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
L++ Q H + I L+ N L S+I+ Y+K G I A ++ ML+ D+++ L
Sbjct: 296 LDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLL 355
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
IS + + K A ++ M + + D V L +L+ A +++ LG++ H + +
Sbjct: 356 ISSYVQHHQVGK-ALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRN 414
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
D V N++IDMYAK I DA + FD +++++ W +L+A YA+ G EA++L+
Sbjct: 415 LESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFY 474
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
+M+ + + PN +++ S++ G E ++F+ M P ++ ++ A+
Sbjct: 475 QMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQM-QSLGFQPNLITWTTLISGLAQS 533
Query: 485 GQLESA---YNMIRQMNIKPTASLWSAILGAC----SIYGNTSLGELAARNLFDMEPEKS 537
G A + +++ I+P+ + +++L AC S++ ++ R+ F + +
Sbjct: 534 GFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVA 593
Query: 538 VNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+ V ++Y G+ D A+K +M + L
Sbjct: 594 TSLV---DMYAKCGSIDEAKKVFHMMSSKEL 621
>gi|413935694|gb|AFW70245.1| hypothetical protein ZEAMMB73_875976 [Zea mays]
Length = 807
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 181/560 (32%), Positives = 286/560 (51%), Gaps = 48/560 (8%)
Query: 28 LDPSTYMSLLQFCIDK--------KAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVG 79
+DP S+L C +A + A IHA ++ G+ S+ H+ ++ YAK
Sbjct: 241 VDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGM 300
Query: 80 DVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALR 139
+ A K F+ + ++VSW +I+GY Q G E A+ V M SG N+ TYS+ L
Sbjct: 301 KMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLA 360
Query: 140 ACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS 199
+C + R + R +F++I + V +
Sbjct: 361 SCIKARDVPSARA-----------------------------------MFDKIPKPSVTT 385
Query: 200 WNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS--VGGIELMKISQIHDL 257
WN ++ G + + ++ LFR M Q ++PD TL IL + +G EL K Q+H
Sbjct: 386 WNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGK--QVHSA 443
Query: 258 IIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKE 317
++L L + + LID+Y+K G + A ++ M + D++ ++ISG A + S+E
Sbjct: 444 SVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSMISGLAIH-SLSEE 502
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
AFD K M M + M+N+CA ++S+ GRQ+HA K + VG +LID
Sbjct: 503 AFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGCSLID 562
Query: 378 MYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVT 437
MYAKSG + DA F+ M KN+++W +I GYA++G+G +A+EL++ M P+ VT
Sbjct: 563 MYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVT 622
Query: 438 FLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
F+++L CSH+GL E F M + Y I P EH++C++D AR + +I +M
Sbjct: 623 FIAVLTGCSHSGLVDEAVTFFNSMESNYGITPLVEHYTCLIDALARAARFAEVEAVIGKM 682
Query: 498 NIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNAR 557
K LW +L AC ++ N LGE +A++LF ++P+ YV+LSNIY G +A
Sbjct: 683 PYKDDPILWEVLLAACVVHHNAELGEFSAKHLFRLDPKNPSPYVLLSNIYATLGRHGDAS 742
Query: 558 KTRKLMEERSLRKNPGYSFL 577
R LM R + K GYS++
Sbjct: 743 AVRALMSSRGVVKGRGYSWV 762
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 149/572 (26%), Positives = 257/572 (44%), Gaps = 86/572 (15%)
Query: 64 NLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML 123
N++ I + GD+ +AR RMP+RN VSW +I+ A++G AL ++ ML
Sbjct: 75 NVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSGSPGEALEMYQGML 134
Query: 124 RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIE 183
+ G+ FT +S L AC + L GR G K + FV++ LL +Y KCG +
Sbjct: 135 QEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVA 194
Query: 184 DAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL---- 239
DA LF+ + + VS+ AM+GGLA G DD+ LF M R G++ D + S+L
Sbjct: 195 DAVRLFDGMPSPNEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACA 254
Query: 240 RASVGGIELMKISQ----IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLK 295
+A G + + Q IH L+++ G S + SL+D+YAK + A +++ S+
Sbjct: 255 QACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSS 314
Query: 296 TDIISCTALISGF-------------------------------------ARDDNHSKEA 318
I+S LI+G+ ARD ++
Sbjct: 315 VSIVSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPSARAM 374
Query: 319 FD----------------------------LFKDMILKKMGIDDVILCLMLNICANVASL 350
FD LF+ M + + D L ++L+ C+ + +
Sbjct: 375 FDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNF 434
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
LG+Q+H+ + + D V + LID+Y+K G++ A F+ M +++V+ W S+I+G
Sbjct: 435 ELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSMISGL 494
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
A H EA + K+M+ GM P + ++ S++ C+ +G ++ ++ +
Sbjct: 495 AIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDG--YDQ 552
Query: 471 AEHFSC-VVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
+ C ++D++A+ G ++ A M +K + I G Y GE A L
Sbjct: 553 NVYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAWNEMIHG----YAQNGFGEKAVE-L 607
Query: 530 FDM-----EPEKSVNYVVLSNIYTAAGAWDNA 556
F+ + SV ++ + + +G D A
Sbjct: 608 FEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEA 639
>gi|357504423|ref|XP_003622500.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497515|gb|AES78718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 655
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 171/537 (31%), Positives = 292/537 (54%), Gaps = 13/537 (2%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMI-SGYAQNG 110
+HAH+I G+ L L +++ Y K + A+K F+ +P RNVVSW MI + +N
Sbjct: 82 LHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPVRNVVSWNIMIRASVGRND 141
Query: 111 YDENALL-----VFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVEN 165
+E++ + F ML + + T++ + C + ++ G + K F +
Sbjct: 142 ENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDIEMGVQLHCFTVKVGFDLD 201
Query: 166 LFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR 225
FV AL+ LYAKCG++E+A +F + +D+V WN M+ +++F +F SM
Sbjct: 202 CFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCYVFNSLPEEAFRVFNSMRL 261
Query: 226 QGMKPDCFTLGSILRA-SVGGIELMKI-SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
+ D FT S+L S +E Q+H L+++ +S + +LI++YAK +I
Sbjct: 262 DVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQSFDSDVLVASALINMYAKSENI 321
Query: 284 RSAYQLYRSMLKTDIISCTALISGFARDDNHS--KEAFDLFKDMILKKMGIDDVILCLML 341
A +++ M ++++ +I GF NH E L K+M+ + D++ + ++
Sbjct: 322 IDARRVFDEMSIRNVVAWNTMIVGFG---NHGDGNEVMKLVKEMLREGFLPDELTISSII 378
Query: 342 NICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVI 401
+ C +++ Q+HAFA K +V N+LI Y+K G I A + F+ +++
Sbjct: 379 SSCGYASAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFKCFELTSQPDLV 438
Query: 402 SWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM 461
+WTSLI YA HG ++ E+++KM G+ P+ + FL +L AC+H GL +G F M
Sbjct: 439 TWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAHCGLVTKGLHYFKLM 498
Query: 462 INKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSL 521
N Y+I+P +EH++C+VDL R G + A+ ++R M I+ + A +G+C ++ N L
Sbjct: 499 TNAYQIVPDSEHYTCLVDLLGRYGLINEAFEILRSMPIEVDSDTLGAFIGSCKLHSNMEL 558
Query: 522 GELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+LAA LF +EPEKSVNY V+SNI+ + W + + RK ME++ K PG S+++
Sbjct: 559 AKLAAEKLFLIEPEKSVNYAVMSNIFASQKHWYDVERIRKTMEDKRDAKVPGCSWIE 615
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 208/397 (52%), Gaps = 23/397 (5%)
Query: 135 SSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER 194
S+AL+ A+ +L G+ + + K F + L +++ +L +Y KC EDA LFE +
Sbjct: 64 SNALKISAKKGYLPEGKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPV 123
Query: 195 KDVVSWNAMIGGLAMQGFNDDS--------FWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
++VVSWN MI A G ND++ F FR M+ + M PD T ++
Sbjct: 124 RNVVSWNIMIR--ASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFN 181
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
++ Q+H +K+G + + +L+ +YAK G + +A +++ + D++ ++S
Sbjct: 182 DIEMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVS 241
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA--SLNLGRQIHAFAFKYQ 364
+ ++ +EAF +F M L + D+ +L++ ++ A + G+Q+H+ +
Sbjct: 242 CYVF-NSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQS 300
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
D V +ALI+MYAKS I DA R FDEM +NV++W ++I G+ HG G+E ++L K
Sbjct: 301 FDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLVK 360
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV----VDL 480
+M EG +P+++T S++ +C + E T ++ + + + F V +
Sbjct: 361 EMLREGFLPDELTISSIISSCGYASAITE-----TLQVHAFAVKLSCQDFLSVANSLISA 415
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
+++ G + SA+ ++ +P W++++ A + +G
Sbjct: 416 YSKCGSITSAFKCF-ELTSQPDLVTWTSLIYAYAFHG 451
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 183/370 (49%), Gaps = 11/370 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ L+ C +H + G++ + + ++ YAK G V +AR+ F
Sbjct: 166 DHITFNGLICLCTQFNDIEMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVF 225
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA--RMRW 146
+ R++V W M+S Y N E A VF++M V ++FT+SS L + + +
Sbjct: 226 CDVSCRDLVMWNVMVSCYVFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVISDDALEY 285
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
G+ + + + F ++ V SAL+++YAK I DA +F+ + ++VV+WN MI G
Sbjct: 286 YDFGKQVHSLVLRQSFDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVG 345
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
G ++ L + M+R+G PD T+ SI+ + + + Q+H +KL +
Sbjct: 346 FGNHGDGNEVMKLVKEMLREGFLPDELTISSIISSCGYASAITETLQVHAFAVKLSCQDF 405
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ SLI Y+K GSI SA++ + + D+++ T+LI +A ++++ ++F+ M+
Sbjct: 406 LSVANSLISAYSKCGSITSAFKCFELTSQPDLVTWTSLIYAYAF-HGLAEKSTEMFEKML 464
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF---KYQSSYDAAVGNALIDMYAKSG 383
+ D + +L+ CA+ + G +H F YQ D+ L+D+ + G
Sbjct: 465 SYGIKPDRIAFLGVLSACAHCGLVTKG--LHYFKLMTNAYQIVPDSEHYTCLVDLLGRYG 522
Query: 384 EIADANRAFD 393
I N AF+
Sbjct: 523 LI---NEAFE 529
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 88/190 (46%), Gaps = 8/190 (4%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L D T S++ C A + +HA + + L ++ +I Y+K G + SA K
Sbjct: 368 LPDELTISSIISSCGYASAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFK 427
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
F+ + ++V+WT++I YA +G E + +F ML G++ ++ + L ACA
Sbjct: 428 CFELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAHCGL 487
Query: 147 LQGG----RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERK-DVVSWN 201
+ G +++ + Q V + + L+DL + G I +A+ + + + D +
Sbjct: 488 VTKGLHYFKLMTNAYQ---IVPDSEHYTCLVDLLGRYGLINEAFEILRSMPIEVDSDTLG 544
Query: 202 AMIGGLAMQG 211
A IG +
Sbjct: 545 AFIGSCKLHS 554
>gi|449439735|ref|XP_004137641.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
gi|449514868|ref|XP_004164502.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 601
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 176/548 (32%), Positives = 302/548 (55%), Gaps = 3/548 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ LL+ C + + ++HAH+I G+ES++ + T ++ Y+K ++ ++R+ FD
Sbjct: 55 TFPLLLKACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDET 114
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW--LQG 149
R+V+SW +MI+ Y+++ AL +F ML G N T+ S L A L
Sbjct: 115 STRSVISWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQ 174
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
GR++ G + K + ++ V+++L+ +Y G I+ A +F I K V+SW M+GG
Sbjct: 175 GRLLHGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLK 234
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
G F F M + + D F I+ + + L S +H L++K GL+ + +
Sbjct: 235 AGAVAKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPI 294
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
LI +Y+K G + SA ++ + + I S T++ISG+A + + +EA LF
Sbjct: 295 GCLLISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYA-NAGYPREALSLFSMATQNN 353
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
+ + +L ++ CA++ SL++ R+I AF + + D+ V +LI +Y K G I A
Sbjct: 354 VRPNGAMLATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAE 413
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
+ F+ M +++ +W+S++ GYA HG G + + L+ +M+ G+ P+ + S+L ACSH+G
Sbjct: 414 KVFNSMIHRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSG 473
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
L +G E F +M Y I+P H++C+VD+ +R G LE A N I++M + + W+
Sbjct: 474 LVEDGLEHFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPF 533
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
L AC Y + LGE+A R L P VN+V+++N+YT+ G W A K R L++++ L
Sbjct: 534 LSACRTYCDVELGEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLV 593
Query: 570 KNPGYSFL 577
K PG S L
Sbjct: 594 KEPGCSQL 601
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 131/506 (25%), Positives = 240/506 (47%), Gaps = 40/506 (7%)
Query: 99 WTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQ 158
W I G+ +L +S M SG+ N FT+ L+ACA + + G M+ +
Sbjct: 21 WNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDGTMLHAHLI 80
Query: 159 KGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFW 218
F ++FV+++L+D+Y+K + + +F+ + V+SWN+MI + +++
Sbjct: 81 HVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRSFRVNEALK 140
Query: 219 LFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDV 276
LFR M+ G +P+ T S+L A L + +H + K L + SL+ +
Sbjct: 141 LFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTPVENSLVQM 200
Query: 277 YAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVI 336
Y +G I SA ++ ++ + +IS T ++ G+ + +K F+ F M + +D +
Sbjct: 201 YVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAK-VFETFSQMRQNNVVLDKFV 259
Query: 337 LCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG 396
+++ C + +L LG +H+ K Y+ +G LI MY+K G++ A FD +
Sbjct: 260 FVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCGDLLSARAVFDLLS 319
Query: 397 DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG------- 449
+K++ SWTS+I+GYA GY EA+ L+ + PN + + AC+ G
Sbjct: 320 EKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAMLATAISACADLGSLSMRRE 379
Query: 450 ----LTCEGW----ELFTDMIN---KYRILPRAEH------------FSCVVDLFARRGQ 486
+ +G ++ T +I+ K+ + +AE +S +++ +A G
Sbjct: 380 IEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAVHGM 439
Query: 487 LESAYNMIRQMN---IKPTASLWSAILGACSIYGNTSLGELAARNL---FDMEPEKSVNY 540
E N+ +M IKP S++++IL ACS G G +N+ + + P V+Y
Sbjct: 440 GEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLEHFKNMQLDYGIVPTM-VHY 498
Query: 541 VVLSNIYTAAGAWDNARKTRKLMEER 566
L +I + AG + A T + M +
Sbjct: 499 TCLVDILSRAGHLELALNTIQEMPTQ 524
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 179/413 (43%), Gaps = 37/413 (8%)
Query: 192 IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI 251
I +K + WN I GF S + M G+ + FT +L+A +
Sbjct: 13 ITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDG 72
Query: 252 SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD 311
+ +H +I +G ES + SL+D+Y+K+ ++R++ Q++ +IS ++I+ ++R
Sbjct: 73 TMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSR- 131
Query: 312 DNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV--ASLNLGRQIHAFAFKYQSSYDA 369
EA LF++M+ + +L+ A+ SL GR +H K+Q D
Sbjct: 132 SFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDT 191
Query: 370 AVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE 429
V N+L+ MY G+I A F + +K VISWT ++ GY K G + E + +M+
Sbjct: 192 PVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQN 251
Query: 430 GMVPNDVTFLSLLFAC----------------SHTGLTCEG--WELFTDMINK------- 464
+V + F+ ++ +C TGL E L M +K
Sbjct: 252 NVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCGDLLSA 311
Query: 465 ---YRILPRAEHFS--CVVDLFARRGQLESA---YNMIRQMNIKPTASLWSAILGACSIY 516
+ +L +S ++ +A G A ++M Q N++P ++ + + AC+
Sbjct: 312 RAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAMLATAISACADL 371
Query: 517 GNTSL-GELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
G+ S+ E+ A D S L ++Y G+ + A K M R L
Sbjct: 372 GSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDL 424
>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Vitis vinifera]
Length = 847
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 280/527 (53%), Gaps = 36/527 (6%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H I +G+ES+LHL+ ++ YAK G++ SA F MPE +VVSW MI+GY Q
Sbjct: 274 VHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQ 333
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
A+ M G ++ TY + L AC + G I+ GR
Sbjct: 334 SSKAIEYLQRMQYHGFEPDEITYVNMLVACIK----------SGDIEAGR---------- 373
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
+F+ + + SWN ++ G + + ++ LFR M + + PD
Sbjct: 374 ---------------QMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPD 418
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
TL IL + G + L Q+H + K + L LI +Y+K G + A +++
Sbjct: 419 RTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFD 478
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
+ + DI+ ++++G + + + KEAF FK M K M +L+ CA ++SL+
Sbjct: 479 RIAELDIVCWNSMMAGLSLN-SLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLS 537
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
GRQ+H+ + DA VG+ALIDMY+K G++ A FD M KN ++W +I GYA
Sbjct: 538 QGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYA 597
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
++G G EA+ LY+ M G P+ +TF+++L ACSH+GL G ++F M ++ + P
Sbjct: 598 QNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLV 657
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
+H++C++D R G+L A +I +M K +W +L +C +Y + SL AA LF
Sbjct: 658 DHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFH 717
Query: 532 MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
++P+ S YV+L+NIY++ G WD+A+ R+LM + K+PGYS+++
Sbjct: 718 LDPQNSAPYVLLANIYSSLGRWDDAKAVRELMSYNQVVKDPGYSWIE 764
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 149/534 (27%), Positives = 250/534 (46%), Gaps = 90/534 (16%)
Query: 31 STYM-SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFD 89
+TY+ SLLQ CIDKKA LIHAH++ + + LS ++I FYAK + ++R+ FD
Sbjct: 5 TTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFD 64
Query: 90 RMP-------------------------------ERNVVSWTAMISGYAQNGYDENALLV 118
+MP ERN+VSW +IS +NG+++ AL V
Sbjct: 65 QMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGV 124
Query: 119 FSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
+ M R G FT +S L AC + ++ GR G K N++V +ALL +YAK
Sbjct: 125 YYRMSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAK 184
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
C I DA F + + VS+ AM+GGLA +++F LFR M+R + D +L S+
Sbjct: 185 CRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSV 244
Query: 239 L----RASVGGIEL----------MKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIR 284
L R G L + Q+H L IK G ES L SL+D+YAK G++
Sbjct: 245 LGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMD 304
Query: 285 SAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNIC 344
SA ++ +M + ++S +I+G+ + SK A + + M D++ ML C
Sbjct: 305 SAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSK-AIEYLQRMQYHGFEPDEITYVNMLVAC 363
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWT 404
KSG+I + FD M ++ SW
Sbjct: 364 -----------------------------------IKSGDIEAGRQMFDGMSSPSLSSWN 388
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK 464
++++GY+++ EA++L+++M+ + P D T L+++ + + EG + K
Sbjct: 389 TILSGYSQNENHKEAVKLFREMQFRSVHP-DRTTLAIILSSLAGMMLLEGGRQVHAVSQK 447
Query: 465 YRILPRAEHFSCVVDLFARRGQLESA---YNMIRQMNIKPTASLWSAILGACSI 515
S ++ ++++ G++E A ++ I +++I W++++ S+
Sbjct: 448 AVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDI----VCWNSMMAGLSL 497
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 139/262 (53%), Gaps = 5/262 (1%)
Query: 47 RQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGY 106
RQ H + + + ++++L++ +I Y+K G V A++ FDR+ E ++V W +M++G
Sbjct: 439 RQVHAVSQKAV---FRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGL 495
Query: 107 AQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENL 166
+ N D+ A F M G+ +QF+Y++ L CA++ L GR + I + ++ +
Sbjct: 496 SLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDA 555
Query: 167 FVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ 226
FV SAL+D+Y+KCG ++ A +F+ + K+ V+WN MI G A G D++ L+ M+
Sbjct: 556 FVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGS 615
Query: 227 GMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRS 285
G KPD T ++L A S G+ I + + + G+E +ID + G +
Sbjct: 616 GEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHE 675
Query: 286 AYQLYRSM-LKTDIISCTALIS 306
A L M K D I L+S
Sbjct: 676 AEVLIDKMPCKYDPIIWEVLLS 697
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 102/195 (52%), Gaps = 4/195 (2%)
Query: 14 KQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKV 71
K+A F + + PS +Y ++L C + Q +H+ I GY ++ + + +
Sbjct: 502 KEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSAL 561
Query: 72 IIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQ 131
I Y+K GDV +AR FD M +N V+W MI GYAQNG + A+L++ M+ SG + +
Sbjct: 562 IDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDG 621
Query: 132 FTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK-SALLDLYAKCGWIEDAWILFE 190
T+ + L AC+ + G I S+Q+ VE L + ++D + G + +A +L +
Sbjct: 622 ITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLID 681
Query: 191 RIERK-DVVSWNAMI 204
++ K D + W ++
Sbjct: 682 KMPCKYDPIIWEVLL 696
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 155/416 (37%), Positives = 249/416 (59%), Gaps = 6/416 (1%)
Query: 167 FVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ 226
F+ + L+++Y K G + DA +F+++ ++VVSW MI + ND + M+R+
Sbjct: 1 FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60
Query: 227 GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSA 286
G++P+ FT S+LRA G L + Q+H IIK+GL+S + +LIDVY+++G + +A
Sbjct: 61 GVRPNMFTYSSVLRACDG---LFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENA 117
Query: 287 YQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICAN 346
+++ M+ D++ +++I+GFA++ + EA LFK M L +L C
Sbjct: 118 LRVFDEMVTGDLVVWSSIIAGFAQNSD-GDEALRLFKRMKRAGFLAQQTTLTSVLRACTG 176
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
+A L LGRQ+H KY D + NAL+DMY K G + DAN F M +K+VISW+++
Sbjct: 177 LALLELGRQVHVHVLKYDQ--DLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTM 234
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYR 466
IAG A++GY EA++L++ MK G+ PN VT + +LFACSH GL EG F M +
Sbjct: 235 IAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFG 294
Query: 467 ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAA 526
I P EH+ C++DL R G+L A ++I +M +P A W A+L AC ++ N + AA
Sbjct: 295 IDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAA 354
Query: 527 RNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+ + ++P+ + YV+LSNIY W++ + R+ M R ++K PG S+++ SK+
Sbjct: 355 KQILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQ 410
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/358 (32%), Positives = 191/358 (53%), Gaps = 8/358 (2%)
Query: 71 VIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
+I Y K G + A+ FD+MP+RNVVSWT MIS Y+ ++ AL MLR GVR N
Sbjct: 6 LINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPN 65
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE 190
FTYSS LRAC + L R + I K ++FV+SAL+D+Y++ G +E+A +F+
Sbjct: 66 MFTYSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFD 122
Query: 191 RIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMK 250
+ D+V W+++I G A D++ LF+ M R G TL S+LRA G L
Sbjct: 123 EMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLEL 182
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR 310
Q+H ++K + L +L+D+Y K GS+ A ++ M++ D+IS + +I+G A+
Sbjct: 183 GRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQ 240
Query: 311 DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDA 369
+ +SKEA LF+ M + + + V + +L C++ + G H+ +
Sbjct: 241 -NGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGR 299
Query: 370 AVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
+ID+ ++G +++A +EM + + ++W +L+ H AI K++
Sbjct: 300 EHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQI 357
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 157/278 (56%), Gaps = 7/278 (2%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
TY S+L+ C RQ +H II G +S++ + + +I Y++ G++ +A + FD M
Sbjct: 68 TYSSVLRACDGLFNLRQ---LHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEM 124
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
++V W+++I+G+AQN + AL +F M R+G A Q T +S LRAC + L+ GR
Sbjct: 125 VTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGR 184
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ + K + ++L + +ALLD+Y KCG +EDA +F R+ KDV+SW+ MI GLA G
Sbjct: 185 QVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNG 242
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLT 270
++ ++ LF SM G+KP+ T+ +L A S G+ + H + G++ +
Sbjct: 243 YSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHY 302
Query: 271 GSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALISG 307
G +ID+ + G + A L M + D ++ AL++
Sbjct: 303 GCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNA 340
>gi|356546044|ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Glycine max]
Length = 628
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 176/562 (31%), Positives = 306/562 (54%), Gaps = 14/562 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T ++ LQ C + +H H++ N + + T +I Y+K + + + F
Sbjct: 28 DLGTCIATLQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVF 87
Query: 89 D--RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
+ +NV ++ A+I+G+ N + AL +++ M G+ ++FT+ +RAC
Sbjct: 88 NFPTHHNKNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDDDD 147
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
I G + K ++FV SAL++ Y K ++ +A+ +FE + +DVV WNAM+ G
Sbjct: 148 GFVVTKIHGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNAMVNG 207
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLES 265
A G +++ +FR M G+ P +T+ +L SV G + +H + K+G ES
Sbjct: 208 FAQIGRFEEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMG-DFDNGRAVHGFVTKMGYES 266
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
++ +LID+Y K + A ++ M + DI S +++S R +H LF M
Sbjct: 267 GVVVSNALIDMYGKCKCVGDALSVFEMMDEIDIFSWNSIMSVHERCGDHYG-TLRLFDRM 325
Query: 326 I-LKKMGIDDVILCLMLNICANVASLNLGRQIHAF----AFKYQSSYDA----AVGNALI 376
+ ++ D V + +L C ++A+L GR+IH + + S+D + NAL+
Sbjct: 326 MGSSRVQPDLVTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHDVFDDVLLNNALM 385
Query: 377 DMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDV 436
DMYAK G + DA F M +K+V SW +I GY HGYG EA++++ +M MVPN++
Sbjct: 386 DMYAKCGNMRDARMVFVNMREKDVASWNIMITGYGMHGYGGEALDIFSRMCQAQMVPNEI 445
Query: 437 TFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQ 496
+F+ LL ACSH G+ EG ++M +KY + P EH++CV+D+ R GQL AY+++
Sbjct: 446 SFVGLLSACSHAGMVKEGLGFLSEMESKYGVSPSIEHYTCVIDMLCRAGQLMEAYDLVLT 505
Query: 497 MNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNA 556
M K W ++L AC ++ +T L E+AA + ++EP+ NYV++SN+Y G ++
Sbjct: 506 MPFKADPVGWRSLLAACRLHNDTDLAEVAASKVIELEPDHCGNYVLMSNVYGVVGRYEEV 565
Query: 557 RKTRKLMEERSLRKNPGYSFLQ 578
+ R M++++++K PG S+++
Sbjct: 566 LEWRYTMKQQNVKKRPGCSWIE 587
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 179/575 (31%), Positives = 296/575 (51%), Gaps = 67/575 (11%)
Query: 74 FYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFT 133
YAK G + AR F +MPER+ VSWT M+ G + G +A+ F M+ G+ +QF
Sbjct: 106 MYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPSQFM 165
Query: 134 YSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI- 192
++ L +CA GR + + K + V +++L +Y KCG E A +FER+
Sbjct: 166 LTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMK 225
Query: 193 ------------------------------ERKDVVSWNAMIGGLAMQGFNDDSFWLFRS 222
E + +VSWNA+I G G +D + F
Sbjct: 226 VRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSR 285
Query: 223 MMR-QGMKPDCFTLGSILRASVGGIELMKI-SQIHDLIIKLGLESSNKLTGSLIDVYAKY 280
M+ M+PD FT+ S+L A + ++K+ Q+H I++ G+ S+++ +LI YAK
Sbjct: 286 MLTASSMEPDEFTVTSVLSA-CANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKS 344
Query: 281 GSIRSAYQLYRSMLKTD--IISCTALISGFAR--DDNHSKEAFD---------------- 320
GS+ +A ++ + D +IS TAL+ G+ + D ++E FD
Sbjct: 345 GSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVG 404
Query: 321 ------------LFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYD 368
LF+ MI + L +L+ CA++A L G+QIH A +
Sbjct: 405 YEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQS 464
Query: 369 AAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHGYGHEAIELYKKMK 427
+V NA+I +YA+SG + A R FD++ K ++WTS+I A+HG G +AI L+++M
Sbjct: 465 VSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEML 524
Query: 428 HEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQL 487
G+ P+ VT++ + AC+H G +G + M+N++ I+P H++C+VDL AR G L
Sbjct: 525 RVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLL 584
Query: 488 ESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIY 547
A+ I++M + P +W ++L AC + N L ELAA L ++P+ S Y L+N+Y
Sbjct: 585 TEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNSGAYSALANVY 644
Query: 548 TAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+A G W++A + KL ++++++K G+S+ K
Sbjct: 645 SACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSK 679
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/470 (25%), Positives = 212/470 (45%), Gaps = 78/470 (16%)
Query: 165 NLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMM 224
N F ++LL +YAK G + DA ++F ++ +D VSW M+ GL G D+ F M+
Sbjct: 96 NAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMV 155
Query: 225 RQGMKPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLGLESSNKLTGSLIDVYAKYG-- 281
+G+ P F L ++L +S E I ++H +IKLGL S + S++ +Y K G
Sbjct: 156 GEGLAPSQFMLTNVL-SSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDA 214
Query: 282 ----------SIRS-------------------AYQLYRSMLKTDIISCTALISGFARDD 312
+RS A ++ +M + I+S A+I+G+ +
Sbjct: 215 ETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGY-NQN 273
Query: 313 NHSKEAFDLFKDMIL-KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAV 371
A F M+ M D+ + +L+ CAN+ L +G+Q+H++ + Y + +
Sbjct: 274 GLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQI 333
Query: 372 GNALIDMYAKSGEIADANR---------------------------------AFDEMGDK 398
NALI YAKSG + A R FD M ++
Sbjct: 334 MNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNR 393
Query: 399 NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELF 458
+VI+WT++I GY ++G EA+EL++ M G PN T ++L AC+ G ++
Sbjct: 394 DVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIH 453
Query: 459 TDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
I + + ++ ++AR G + A + Q+ + W++++ A + +G
Sbjct: 454 CRAIRSLQ-EQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHG- 511
Query: 519 TSLGELAARNLFDM-----EPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
LGE A +M +P++ V Y+ + + T AG D ++ + M
Sbjct: 512 --LGEQAIVLFEEMLRVGVKPDR-VTYIGVFSACTHAGFIDKGKRYYEQM 558
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 123/471 (26%), Positives = 213/471 (45%), Gaps = 71/471 (15%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ G+ A+K L L PS +M ++L C +A +H+ +I G S +
Sbjct: 140 RAGRFWDAVKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVP 199
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMIS---------------------- 104
++ V+ Y K GD +AR F+RM R+ SW AM+S
Sbjct: 200 VANSVLYMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERS 259
Query: 105 ---------GYAQNGYDENALLVFSAMLR-SGVRANQFTYSSALRACARMRWLQGGRMIQ 154
GY QNG D+ AL FS ML S + ++FT +S L ACA +R L+ G+ +
Sbjct: 260 IVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMH 319
Query: 155 -------------------------GSIQKGRFVE--------NLFVKSALLDLYAKCGW 181
GS++ R + N+ +ALL+ Y K G
Sbjct: 320 SYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGD 379
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
+ A +F+ + +DV++W AMI G G ND++ LFRSM+R G +P+ TL ++L A
Sbjct: 380 TKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSA 439
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML-KTDIIS 300
L QIH I+ E S ++ ++I VYA+ GS+ A +++ + + + ++
Sbjct: 440 CASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVT 499
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
T++I A+ ++A LF++M+ + D V + + C + ++ G++ +
Sbjct: 500 WTSMIVALAQ-HGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQM 558
Query: 361 FKYQSSYDAAVGNA-LIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAG 409
A ++D+ A++G + +A+ M + + W SL+A
Sbjct: 559 LNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAA 609
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 114/258 (44%), Gaps = 46/258 (17%)
Query: 340 MLNICANVASLNLGRQIHAFAFK---YQSSY----------DAAVG-------------- 372
+L + + + GR IHA A K S+Y A VG
Sbjct: 31 LLQLSQTAVNPSAGRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDI 90
Query: 373 ----------NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIEL 422
N+L+ MYAKSG +ADA F +M +++ +SWT ++ G + G +A++
Sbjct: 91 PYARRNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKT 150
Query: 423 YKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWEL--FTDMINKYRILPRAEHFSCVVDL 480
+ M EG+ P+ ++L +C+ T G ++ F + +P A + V+ +
Sbjct: 151 FLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVA---NSVLYM 207
Query: 481 FARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNY 540
+ + G E+A + +M ++ +S W+A++ S+Y + +LA +ME V++
Sbjct: 208 YGKCGDAETARAVFERMKVRSESS-WNAMV---SLYTHQGRMDLALSMFENMEERSIVSW 263
Query: 541 VVLSNIYTAAGAWDNARK 558
+ Y G D A K
Sbjct: 264 NAIIAGYNQNGLDDMALK 281
>gi|147779768|emb|CAN71727.1| hypothetical protein VITISV_003014 [Vitis vinifera]
Length = 1167
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 174/532 (32%), Positives = 293/532 (55%), Gaps = 6/532 (1%)
Query: 51 LIHAHIITNG-YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQN 109
L+H I T ++S L++S ++ FY+ G + S+ K F +MP RN +SW +ISG N
Sbjct: 637 LMHLAIKTGKEFDSXLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHN 696
Query: 110 GYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK 169
G + A+ + M + + + T S + C L G + G K F ++ +
Sbjct: 697 GDTKKAVALLHKMQQEKMELDLVTLISIIPICRVXENLIQGMTLHGYAIKTGFACDVSLV 756
Query: 170 SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
+AL+ +Y CG I LFE + + +VSWNA+I G ++ F M+ +G K
Sbjct: 757 NALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIXEGQK 816
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
P+ TL ++L + L++ IH ++ G+ + SLI +YA++ +I S L
Sbjct: 817 PNYVTLLNLLPSCX---TLLQGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFL 873
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ K DI A++S + + N +KE+ F +++ ++ D + +++ C ++S
Sbjct: 874 FEMGGKEDIALWNAIMSVYVQTKN-AKESVTFFCELLHARVEPDYITFLSLISACVQLSS 932
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
LNL + A+ + + NALID++A+ G I+ A + F+ + K+ +SW+++I G
Sbjct: 933 LNLSNSVMAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMING 992
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
Y HG A+ L +M+ GM P+ +T+ S+L ACSH G +GW +F M+ + +
Sbjct: 993 YGLHGDSEAALALLSQMRLSGMKPDGITYASVLSACSHGGFIDQGWMIFNSMVEE-GVPR 1051
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
R EH++C+VDL R GQL AY+ + ++ KP+ SL ++L AC I+GN LGE L
Sbjct: 1052 RMEHYACMVDLLGRTGQLNEAYDFVEKLPCKPSVSLLESLLXACIIHGNVKLGEKICSLL 1111
Query: 530 FDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSK 581
F+++P+ S +YV+L NIY AAG W +A + R MEER LRK PG+S ++ ++
Sbjct: 1112 FELDPKNSGSYVMLYNIYAAAGRWMDANRVRSDMEERQLRKIPGFSLVEGNR 1163
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 153/570 (26%), Positives = 261/570 (45%), Gaps = 84/570 (14%)
Query: 21 LSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGD 80
L CP D T+ +++ C A A +H ++ +E NL + T ++ FYAK G
Sbjct: 339 LGCPS---DDFTFPFVIKACSALGAVWIAEGVHCIVLRTAFEENLVIQTALVDFYAKTGR 395
Query: 81 VLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRA 140
++ AR D++ + ++V+W A+ISGY+ NG+D+ V +L G++ N T++S +
Sbjct: 396 MVKARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEVLRQILEMGLKPNVSTFASIIPL 455
Query: 141 CARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSW 200
C RM+ L G+ I G + K F + F+ AL+ +YA G + A LF+ K+VV W
Sbjct: 456 CTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIW 515
Query: 201 NAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIK 260
N+MI A + ++F +F+ M++ M+P+ T SI+ +H ++K
Sbjct: 516 NSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWXGKSLHAHVMK 575
Query: 261 LGLESSNKLTGSLIDVYAKYGSIRSA----YQLYR-SMLKTDIISCTALIS--------- 306
L+S + +L+ +YAK G SA YQ+ R + + +IS ++S
Sbjct: 576 YRLDSQLSVATALLSMYAKLGDXNSAXFIFYQMPRKTSYRDSMISGYGIMSMGRPFFWVR 635
Query: 307 ------------------------GFARDDNHSKEAFDLFKDMILK-------------- 328
F D +F LF+ M L+
Sbjct: 636 LLMHLAIKTGKEFDSXLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVH 695
Query: 329 -----------------KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAV 371
KM +D V L ++ IC +L G +H +A K + D ++
Sbjct: 696 NGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVXENLIQGMTLHGYAIKTGFACDVSL 755
Query: 372 GNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGM 431
NALI MY G+I F+ M ++++SW +LI GY H +E + + +M EG
Sbjct: 756 VNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIXEGQ 815
Query: 432 VPNDVTFLSLLFACSH--TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLES 489
PN VT L+LL +C G + + + T +I + I+ + ++ ++AR + S
Sbjct: 816 KPNYVTLLNLLPSCXTLLQGKSIHAFAVRTGVIVETPII------TSLISMYARFENINS 869
Query: 490 AYNMIRQMNIKPTASLWSAILGACSIYGNT 519
+ + +M K +LW+AI+ S+Y T
Sbjct: 870 -FIFLFEMGGKEDIALWNAIM---SVYVQT 895
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 172/335 (51%), Gaps = 6/335 (1%)
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
A AF+ + + +V MI +G E+ L V+ G ++ FT+ ++AC+
Sbjct: 298 ALSAFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACSA 357
Query: 144 M--RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN 201
+ W+ G + + + F ENL +++AL+D YAK G + A ++ ++I + D+V+WN
Sbjct: 358 LGAVWIAEG--VHCIVLRTAFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWN 415
Query: 202 AMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKL 261
A+I G ++ GF+ + F + R ++ G+KP+ T SI+ L IH ++K
Sbjct: 416 ALISGYSLNGFDKEVFEVLRQILEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKS 475
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDL 321
G S LT +LI +YA G++ A L+ S + +++ ++IS +A++ S EAF +
Sbjct: 476 GFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQK-SSEAFKM 534
Query: 322 FKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
F+ M+ M + V ++ C N A+ G+ +HA KY+ +V AL+ MYAK
Sbjct: 535 FQQMLKANMQPNVVTFVSIIPCCENSANFWXGKSLHAHVMKYRLDSQLSVATALLSMYAK 594
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYG 416
G+ A F +M K S+I+GY G
Sbjct: 595 LGDXNSAXFIFYQMPRKTSYR-DSMISGYGIMSMG 628
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 175/372 (47%), Gaps = 19/372 (5%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD T +S++ C + Q +H + I G+ ++ L +I Y GD+ + +
Sbjct: 716 LDLVTLISIIPICRVXENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFL 775
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F+ MP R++VSW A+I+GY + + F M+ G + N T + L +C + L
Sbjct: 776 FEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIXEGQKPNYVTLLNLLPSCXTL--L 833
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
QG + +++ G VE + S L+ +YA+ I LFE ++D+ WNA++
Sbjct: 834 QGKSIHAFAVRTGVIVETPIITS-LISMYARFENINSFIFLFEMGGKEDIALWNAIMSVY 892
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
+S F ++ ++PD T S++ A V L + + +I+ G +
Sbjct: 893 VQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNSVMAYVIQKGFDKHI 952
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
++ +LID++A+ G+I A +++ + D +S + +I+G+ + S+ A L M L
Sbjct: 953 VISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMINGYGLHGD-SEAALALLSQMRL 1011
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN------ALIDMYAK 381
M D + +L+ C++ ++ G I + S + V ++D+ +
Sbjct: 1012 SGMKPDGITYASVLSACSHGGFIDQGWMI------FNSMVEEGVPRRMEHYACMVDLLGR 1065
Query: 382 SGEIADANRAFD 393
+G++ N A+D
Sbjct: 1066 TGQL---NEAYD 1074
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 123/261 (47%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y++LL Q IHA + G + T +I YA+ ++ S F+
Sbjct: 819 YVTLLNLLPSCXTLLQGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFLFEMGG 878
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
+ ++ W A++S Y Q + ++ F +L + V + T+ S + AC ++ L
Sbjct: 879 KEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNS 938
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF 212
+ + + F +++ + +AL+DL+A+CG I A +FE + KD VSW+ MI G + G
Sbjct: 939 VMAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMINGYGLHGD 998
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS 272
++ + L M GMKPD T S+L A G + + I + +++ G+ +
Sbjct: 999 SEAALALLSQMRLSGMKPDGITYASVLSACSHGGFIDQGWMIFNSMVEEGVPRRMEHYAC 1058
Query: 273 LIDVYAKYGSIRSAYQLYRSM 293
++D+ + G + AY +
Sbjct: 1059 MVDLLGRTGQLNEAYDFVEKL 1079
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 105/195 (53%), Gaps = 2/195 (1%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNG 60
I+ +T K+++ F ++P T++SL+ C+ + ++ + A++I G
Sbjct: 888 IMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNSVMAYVIQKG 947
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
++ ++ +S +I +A+ G++ A+K F+ + ++ VSW+ MI+GY +G E AL + S
Sbjct: 948 FDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMINGYGLHGDSEAALALLS 1007
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M SG++ + TY+S L AC+ ++ G MI S+ + + + ++DL + G
Sbjct: 1008 QMRLSGMKPDGITYASVLSACSHGGFIDQGWMIFNSMVEEGVPRRMEHYACMVDLLGRTG 1067
Query: 181 WIEDAWILFERIERK 195
+ +A+ E++ K
Sbjct: 1068 QLNEAYDFVEKLPCK 1082
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 178/536 (33%), Positives = 295/536 (55%), Gaps = 38/536 (7%)
Query: 49 AHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQ 108
A +HA ++ G ++ +ST+++ YA +GDV +R FD++P+++V +W +MIS Y
Sbjct: 35 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 94
Query: 109 NGYDENALLVF-SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLF 167
NG+ A+ F +L S +R + +T+ L+AC L GR I K F N+F
Sbjct: 95 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGT---LVDGRKIHCWAFKLGFQWNVF 151
Query: 168 VKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
V ++L+ +Y++ G+ A LF+ + +D+ SWNAMI GL G + + M +G
Sbjct: 152 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 211
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
+K + T+ SIL +D+YAK G + SA+
Sbjct: 212 IKMNFVTVVSILPV-------------------------------FVDMYAKLGLLDSAH 240
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM-ILKKMGIDDVILCLMLNICAN 346
+++ + D+IS LI+G+A+ + + EA +++K M K++ + +L A+
Sbjct: 241 KVFEIIPVKDVISWNTLITGYAQ-NGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAH 299
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
V +L G +IH K D V LID+Y K G + DA F ++ ++ ++W ++
Sbjct: 300 VGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAI 359
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYR 466
I+ + HG+ + ++L+ +M EG+ P+ VTF+SLL ACSH+G EG F ++ +Y
Sbjct: 360 ISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFR-LMQEYG 418
Query: 467 ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAA 526
I P +H+ C+VDL R G LE AY+ I+ M ++P AS+W A+LGAC I+GN LG+ A+
Sbjct: 419 IKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFAS 478
Query: 527 RNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
LF+++ + YV+LSNIY G W+ K R L ER L+K PG+S ++ ++K
Sbjct: 479 DRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRK 534
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 1/198 (0%)
Query: 15 QALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIF 74
+ K C + + + T++S+L A +Q IH +I ++ ++T +I
Sbjct: 272 EVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDV 331
Query: 75 YAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
Y K G ++ A F ++P+ + V+W A+IS + +G+ E L +F ML GV+ + T+
Sbjct: 332 YGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTF 391
Query: 135 SSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE- 193
S L AC+ +++ G+ +Q+ +L ++DL + G++E A+ + +
Sbjct: 392 VSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPL 451
Query: 194 RKDVVSWNAMIGGLAMQG 211
+ D W A++G + G
Sbjct: 452 QPDASIWGALLGACRIHG 469
>gi|302774170|ref|XP_002970502.1| hypothetical protein SELMODRAFT_93612 [Selaginella moellendorffii]
gi|300162018|gb|EFJ28632.1| hypothetical protein SELMODRAFT_93612 [Selaginella moellendorffii]
Length = 825
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 160/523 (30%), Positives = 290/523 (55%), Gaps = 4/523 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+++LL +A L+H+HI+ +G N+ L T ++ Y+K + R F
Sbjct: 301 DKVTFVALLTMSNGPEALTDVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLF 360
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
++MP+RNV+SW M++ YA++G A+ + M GV+ + T L C L+
Sbjct: 361 EKMPQRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLK 420
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
GR + G I +GR +L + ++LL++Y +CG +E A ++F+ I +++V+SW AM+ +
Sbjct: 421 LGRKVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYS 480
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
Q D + LF ++ G+KP C T L A VG L K +H ++ G ++
Sbjct: 481 RQNRQDMALLLFHAIHLSGVKPTCITFLEALDACVGAEALGKGRLVHSCAVQSGNDTDVS 540
Query: 269 LTGSLIDVYAKYGSIRSAYQLY-RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
L +L+ +Y + GSIR A + + ++ + ++ +A+I+ F + +E + M
Sbjct: 541 LGSALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIAAFVQ-HGQDREGLQHLRFMQQ 599
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA-VGNALIDMYAKSGEIA 386
+ + + L+ C+N+A L G++IH++ + + +AA V N+L+ MY K G +
Sbjct: 600 QGLDMSPATFASTLSACSNLADLREGKRIHSYVRERRFDTEAATVTNSLVTMYGKCGSLD 659
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A F+ +++I W ++I+GYA+HG +A+EL+ +M+ EG+ P+ VTF+ +L CS
Sbjct: 660 CAREVFETSRRQDIICWNAIISGYAQHGQTRDAVELFHRMQQEGVTPDPVTFVCILSVCS 719
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
H GL EG + M+ + + P ++++CV+DL R G+L+ A I+ + +P
Sbjct: 720 HGGLLDEGVYAYASMV-ELGLEPTQDNYACVIDLLGRAGKLQEAEEFIQSLGTRPAIETL 778
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTA 549
+++L +C +G+ G AA + +M+P S +VVLS+IY+A
Sbjct: 779 TSLLSSCKSHGDVQRGRRAAEGIMEMDPRSSSAHVVLSSIYSA 821
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/516 (27%), Positives = 258/516 (50%), Gaps = 13/516 (2%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS 83
PD + T ++ L C +A LIH I +G++ +L L ++ Y G V
Sbjct: 99 PDNI----TLLAALTSCETSQALPAGKLIHGLIAQSGHQCDLILENALVSMYGSCGSVDD 154
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
A++ FD MP RNV++WTAMI +A+ E A VF M G ++N TY + ++AC++
Sbjct: 155 AKRVFDAMPARNVITWTAMIGAHAETSL-EQAFKVFRLMELEGFKSNFVTYVTLVQACSK 213
Query: 144 MRWLQGGRMIQ-GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
+L+ G ++ S++ +E +AL+ +Y +CG +EDA +F + +D+++WNA
Sbjct: 214 PEFLEVGIILHMRSVESSSAMETPLC-NALITMYGRCGRLEDARAIFSSMVERDIIAWNA 272
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
+I G +++ L++ M+++G KPD T ++L S G L + +H I++ G
Sbjct: 273 LITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTDVKLVHSHIVESG 332
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
+ + L +L+ +Y+K S+ L+ M + ++IS +++ +A+ ++A +
Sbjct: 333 VSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAK-HGLGRKAVQIT 391
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
+ M L + D+V +LN+C A L LGR++H + + + D + N+L++MY +
Sbjct: 392 EYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWNSLLNMYGRC 451
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
GE+ A FD + +NVISWT+++ Y++ A+ L+ + G+ P +TFL L
Sbjct: 452 GEVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTCITFLEAL 511
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
AC +G + + + S +V ++ R G + A ++
Sbjct: 512 DACVGAEALGKGRLVHSCAVQSGND-TDVSLGSALVAMYGRCGSIRDAKACFDDTEVRKN 570
Query: 503 ASLWSAILGACSIYGNTSLGELAARNL----FDMEP 534
WSA++ A +G G R + DM P
Sbjct: 571 HVTWSAMIAAFVQHGQDREGLQHLRFMQQQGLDMSP 606
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 134/527 (25%), Positives = 259/527 (49%), Gaps = 4/527 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
TY++L+Q C + ++H + + L +I Y + G + AR F M
Sbjct: 203 TYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALITMYGRCGRLEDARAIFSSM 262
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
ER++++W A+I+ Y Q+G+ E A+L++ ML+ G + ++ T+ + L L +
Sbjct: 263 VERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTDVK 322
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
++ I + N+ + +AL+ +Y+KC +ED LFE++ +++V+SWN M+ A G
Sbjct: 323 LVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHG 382
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
+ + M G+KPD T +L G +L ++H I + E+ L
Sbjct: 383 LGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWN 442
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
SL+++Y + G + A ++ +L+ ++IS TA+++ ++R N A LF + L +
Sbjct: 443 SLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSR-QNRQDMALLLFHAIHLSGVK 501
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
+ L+ C +L GR +H+ A + + D ++G+AL+ MY + G I DA
Sbjct: 502 PTCITFLEALDACVGAEALGKGRLVHSCAVQSGNDTDVSLGSALVAMYGRCGSIRDAKAC 561
Query: 392 FDEMG-DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
FD+ KN ++W+++IA + +HG E ++ + M+ +G+ + TF S L ACS+
Sbjct: 562 FDDTEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQGLDMSPATFASTLSACSNLAD 621
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
EG + + + + A + +V ++ + G L+ A + + + + W+AI+
Sbjct: 622 LREGKRIHSYVRERRFDTEAATVTNSLVTMYGKCGSLDCAREVF-ETSRRQDIICWNAII 680
Query: 511 GACSIYGNTSLG-ELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNA 556
+ +G T EL R + V +V + ++ + G D
Sbjct: 681 SGYAQHGQTRDAVELFHRMQQEGVTPDPVTFVCILSVCSHGGLLDEG 727
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/491 (28%), Positives = 255/491 (51%), Gaps = 22/491 (4%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y+ LLQ C KA A +H+ I+ ++ + L +I Y K + A + F+RM
Sbjct: 3 YVRLLQACPKLKALDIARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMS 62
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
+NV +WTA+I A + A+++ ML GV+ + T +AL +C + L G++
Sbjct: 63 YKNVYTWTAIIGVCAHHHCHSLAIILLRQMLLEGVKPDNITLLAALTSCETSQALPAGKL 122
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF 212
I G I + +L +++AL+ +Y CG ++DA +F+ + ++V++W AMIG A
Sbjct: 123 IHGLIAQSGHQCDLILENALVSMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAETSL 182
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQI-HDLIIKLGLESSNKLTG 271
+ +F +FR M +G K + T ++++A E +++ I H ++ L
Sbjct: 183 -EQAFKVFRLMELEGFKSNFVTYVTLVQA-CSKPEFLEVGIILHMRSVESSSAMETPLCN 240
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
+LI +Y + G + A ++ SM++ DII+ ALI+ + + H +EA L++ M+ +
Sbjct: 241 ALITMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQ-HGHVEEAVLLYQLMLQEGCK 299
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
D V +L + +L + +H+ + S + A+G AL+ MY+K + D
Sbjct: 300 PDKVTFVALLTMSNGPEALTDVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWL 359
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT--- 448
F++M +NVISW ++ YAKHG G +A+++ + M+ +G+ P++VT + LL C+ +
Sbjct: 360 FEKMPQRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADL 419
Query: 449 --GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA---YNMIRQMNIKPTA 503
G GW I + R ++ +++++ R G++E A ++ I Q N+
Sbjct: 420 KLGRKVHGW------IAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGILQRNVIS-- 471
Query: 504 SLWSAILGACS 514
W+A+L A S
Sbjct: 472 --WTAMLTAYS 480
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 80/164 (48%), Gaps = 11/164 (6%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESN-LHLSTKVIIFYAKVGDVLSARK 86
+ P+T+ S L C + R+ IH+++ +++ ++ ++ Y K G + AR+
Sbjct: 604 MSPATFASTLSACSNLADLREGKRIHSYVRERRFDTEAATVTNSLVTMYGKCGSLDCARE 663
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
F+ ++++ W A+ISGYAQ+G +A+ +F M + GV + T+ L C+
Sbjct: 664 VFETSRRQDIICWNAIISGYAQHGQTRDAVELFHRMQQEGVTPDPVTFVCILSVCS---- 719
Query: 147 LQGGRMIQGSIQKGRFVENLFVKS-----ALLDLYAKCGWIEDA 185
GG + +G VE + ++DL + G +++A
Sbjct: 720 -HGGLLDEGVYAYASMVELGLEPTQDNYACVIDLLGRAGKLQEA 762
>gi|242096002|ref|XP_002438491.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
gi|241916714|gb|EER89858.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
Length = 794
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 187/582 (32%), Positives = 312/582 (53%), Gaps = 39/582 (6%)
Query: 32 TYMSLLQFCI----DKKAERQAHLIHAHIITNGY-ESNLHLSTKVII-FYAKVGDVLSAR 85
T +S+L C D + R+AH A + NG+ + + + ++ YA++G V A+
Sbjct: 162 TLVSVLLACSHLAEDLRLGREAH---AFALKNGFLDGDERFAFNALLSMYARLGLVDDAQ 218
Query: 86 KAFDRM-----PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRA 140
F + P VV+W M+S Q+G A+ V M+ GVR + T++SAL A
Sbjct: 219 TLFGSVGATDVPGGGVVTWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASALPA 278
Query: 141 CARMRWLQGGRMIQGSIQK-GRFVENLFVKSALLDLYAKCGWIEDAWILFERIE--RKDV 197
C+++ L GR + + K N FV SAL+D+YA + A ++F+ + + +
Sbjct: 279 CSQLEMLSLGREMHAYVLKDADLAANSFVASALVDMYASHERVGAARLVFDMVPAGERQL 338
Query: 198 VSWNAMIGGLAMQGFNDDSFWLFRSMMRQ-GMKPDCFTLGSILRASVGGIELMKISQIHD 256
WNAMI G A G ++D+ LF M + G+ P T+ +L + +H
Sbjct: 339 GLWNAMICGYAQAGLDEDALELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAVHG 398
Query: 257 LIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSK 316
++K G+ + + +L+D+YA+ G + +A ++ ++ D++S LI+G H +
Sbjct: 399 YVVKRGMADNPFVQNALMDLYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQ-GHIR 457
Query: 317 EAFDLFKDMILKKMGID------------------DVILCLMLNICANVASLNLGRQIHA 358
+AF L ++M + D ++ L +L CA +A+ G++IH
Sbjct: 458 DAFQLVREMQQQGRFTDAATEDGIAGADEEPVVPNNITLMTLLPGCAMLAAPARGKEIHG 517
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHE 418
+A ++ D AVG+AL+DMYAK G +A + FD + +NVI+W LI Y HG G E
Sbjct: 518 YAVRHALDSDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNVITWNVLIMAYGMHGLGDE 577
Query: 419 AIELYKKM-KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
AI L+ +M + PN+VTF++ L ACSH+G+ G E+F M + + P + +C
Sbjct: 578 AIALFDRMVASDEAKPNEVTFIAALAACSHSGMVDRGLEMFRSMKRNHGVEPTPDLHACA 637
Query: 478 VDLFARRGQLESAYNMIRQMNI-KPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEK 536
VD+ R G+L+ AY +I M + S WS+ LGAC ++ N +LGE+AA LF++EP++
Sbjct: 638 VDILGRAGRLDEAYRIISSMEPGEQQVSAWSSFLGACRLHRNVALGEIAAERLFELEPDE 697
Query: 537 SVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+ +YV+L NIY+AAG W+ + + R M +R + K PG S+++
Sbjct: 698 ASHYVLLCNIYSAAGLWEKSSEVRSRMRQRGVSKEPGCSWIE 739
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 138/550 (25%), Positives = 251/550 (45%), Gaps = 62/550 (11%)
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+S ++ YA+ GD+ +A FD MP R+ V++ ++I+ AL ML G
Sbjct: 96 VSNALLTAYARCGDLTAALALFDAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEG 155
Query: 127 VRANQFTYSSALRACARMRW-LQGGRMIQGSIQKGRFV--ENLFVKSALLDLYAKCGWIE 183
FT S L AC+ + L+ GR K F+ + F +ALL +YA+ G ++
Sbjct: 156 HPLTSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVD 215
Query: 184 DAWILFERIERKD-----VVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
DA LF + D VV+WN M+ L G ++ + M+ +G++PD T S
Sbjct: 216 DAQTLFGSVGATDVPGGGVVTWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASA 275
Query: 239 LRASVGGIELMKIS-QIHDLIIKLGLESSNKLTGS-LIDVYAKYGSIRSAYQLYRSMLKT 296
L A +E++ + ++H ++K ++N S L+D+YA + + +A ++
Sbjct: 276 LPA-CSQLEMLSLGREMHAYVLKDADLAANSFVASALVDMYASHERVGAARLVF------ 328
Query: 297 DIISC--------TALISGFARDDNHSKEAFDLFKDMILKKMGI-DDVILCLMLNICANV 347
D++ A+I G+A+ ++A +LF M + + + + +L CA
Sbjct: 329 DMVPAGERQLGLWNAMICGYAQ-AGLDEDALELFARMETEAGVVPSETTIAGVLPSCARS 387
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI 407
+ +H + K + + V NAL+D+YA+ G++ A F + ++V+SW +LI
Sbjct: 388 ETFAGKEAVHGYVVKRGMADNPFVQNALMDLYARLGDMDAARWIFATIEPRDVVSWNTLI 447
Query: 408 AGYAKHGYGHEAIELYKKMKHEG------------------MVPNDVTFLSLLFACSHTG 449
G G+ +A +L ++M+ +G +VPN++T ++LL C+
Sbjct: 448 TGCVVQGHIRDAFQLVREMQQQGRFTDAATEDGIAGADEEPVVPNNITLMTLLPGCAMLA 507
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQL---ESAYNMIRQMNIKPTASLW 506
G E+ + ++ + S +VD++A+ G L + ++ + + N+ W
Sbjct: 508 APARGKEIHGYAV-RHALDSDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNVI----TW 562
Query: 507 SAILGACSIYGNTSLGELAARNLFD---MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
+ ++ A YG LG+ A LFD E N V I A + R L
Sbjct: 563 NVLIMA---YGMHGLGD-EAIALFDRMVASDEAKPNEVTF--IAALAACSHSGMVDRGLE 616
Query: 564 EERSLRKNPG 573
RS+++N G
Sbjct: 617 MFRSMKRNHG 626
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 201/403 (49%), Gaps = 17/403 (4%)
Query: 130 NQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVE--NLFVKSALLDLYAKCGWIEDAWI 187
++F A ++ A +R L R I G+ + ++ V +ALL YA+CG + A
Sbjct: 56 DRFALPPAAKSAAALRSLTAVRSIHGAALRHDLLDGPTPAVSNALLTAYARCGDLTAALA 115
Query: 188 LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIE 247
LF+ + +D V++N++I L + + R M+ +G FTL S+L A E
Sbjct: 116 LFDAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLTSFTLVSVLLACSHLAE 175
Query: 248 LMKIS-QIHDLIIKLG-LESSNKLT-GSLIDVYAKYGSIRSAYQLYRSMLKTD-----II 299
+++ + H +K G L+ + +L+ +YA+ G + A L+ S+ TD ++
Sbjct: 176 DLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQTLFGSVGATDVPGGGVV 235
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
+ ++S + EA ++ DM+ + + D V L C+ + L+LGR++HA+
Sbjct: 236 TWNTMVSLLVQ-SGRCGEAIEVLYDMVARGVRPDGVTFASALPACSQLEMLSLGREMHAY 294
Query: 360 AFKYQS-SYDAAVGNALIDMYAKSGEIADANRAFD--EMGDKNVISWTSLIAGYAKHGYG 416
K + ++ V +AL+DMYA + A FD G++ + W ++I GYA+ G
Sbjct: 295 VLKDADLAANSFVASALVDMYASHERVGAARLVFDMVPAGERQLGLWNAMICGYAQAGLD 354
Query: 417 HEAIELYKKMKHE-GMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFS 475
+A+EL+ +M+ E G+VP++ T +L +C+ + T G E + K + +
Sbjct: 355 EDALELFARMETEAGVVPSETTIAGVLPSCARSE-TFAGKEAVHGYVVKRGMADNPFVQN 413
Query: 476 CVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
++DL+AR G +++A + + + S W+ ++ C + G+
Sbjct: 414 ALMDLYARLGDMDAARWIFATIEPRDVVS-WNTLITGCVVQGH 455
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 128/283 (45%), Gaps = 20/283 (7%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
+T +L C + +H +++ G N + ++ YA++GD+ +AR F
Sbjct: 375 TTIAGVLPSCARSETFAGKEAVHGYVVKRGMADNPFVQNALMDLYARLGDMDAARWIFAT 434
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG------------------VRANQF 132
+ R+VVSW +I+G G+ +A + M + G V N
Sbjct: 435 IEPRDVVSWNTLITGCVVQGHIRDAFQLVREMQQQGRFTDAATEDGIAGADEEPVVPNNI 494
Query: 133 TYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI 192
T + L CA + G+ I G + ++ V SAL+D+YAKCG + + +F+R+
Sbjct: 495 TLMTLLPGCAMLAAPARGKEIHGYAVRHALDSDVAVGSALVDMYAKCGCLALSRAVFDRL 554
Query: 193 ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG-MKPDCFTLGSILRA-SVGGIELMK 250
R++V++WN +I M G D++ LF M+ KP+ T + L A S G+
Sbjct: 555 PRRNVITWNVLIMAYGMHGLGDEAIALFDRMVASDEAKPNEVTFIAALAACSHSGMVDRG 614
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ + G+E + L +D+ + G + AY++ SM
Sbjct: 615 LEMFRSMKRNHGVEPTPDLHACAVDILGRAGRLDEAYRIISSM 657
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 174/557 (31%), Positives = 297/557 (53%), Gaps = 7/557 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY++LL C D + ++ + HA I+ G+ N + ++ Y K G + SAR+ F
Sbjct: 139 DYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLF 198
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
M + VS+ MI+GYA NG +E A+ +F M G + + FT+++ + A +
Sbjct: 199 LEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTA 258
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ I G + K F+ N+FV +A LD Y+K + + LF + D VS+N +I A
Sbjct: 259 FGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYA 318
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G +S LF+ + F ++L + ++L Q+H ++ + +
Sbjct: 319 WVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFR 378
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
++ SL+D+YAK G A +++ + + TA+IS + H + LF +M
Sbjct: 379 VSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLH-ENGLKLFYEMRRA 437
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFK--YQSSYDAAVGNALIDMYAKSGEIA 386
+ D +L AN+AS+ LG+Q+H+ + + + Y G AL+DMYA I
Sbjct: 438 NVSADQATFACVLKASANLASILLGKQLHSCVIRSGFMNVYS---GCALLDMYANCASIK 494
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
DA + F+EM ++NV++W +L++ YA++G G ++ +++M G P+ V+FL +L ACS
Sbjct: 495 DAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACS 554
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
H L EG + F DM Y + P+ EH++ +VD R G+ + A ++ QM +P +W
Sbjct: 555 HCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVW 614
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEP-EKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
+++L +C I+ N +L AA LF+M+ + YV +SNI+ AG WD+ K +K M +
Sbjct: 615 TSVLNSCRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRD 674
Query: 566 RSLRKNPGYSFLQSSKK 582
R +RK P YS+++ K
Sbjct: 675 RGVRKLPAYSWVEIKHK 691
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 239/500 (47%), Gaps = 20/500 (4%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIF-YAKVGDVLSA 84
T DP T S F I +ER L A + + + S +II Y K G++ A
Sbjct: 37 TGFDPIT--SRFNFMIKDLSER-GQLCQARQLLDQMPNRNSFSIDIIISGYVKSGNLTVA 93
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
R+ FD ER VV+WT MI Y+++ +A +F+ M RSG + + TY + L C +
Sbjct: 94 RRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTGCNDL 153
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
+ I K N V + LLD Y K G ++ A LF + D VS+N MI
Sbjct: 154 EVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMI 213
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G A G N+++ LF M G KP FT +++ ASVG + QIH ++K
Sbjct: 214 TGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFI 273
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ + + +D Y+K+ + +L+ M + D +S +I+ +A KE+ DLF++
Sbjct: 274 RNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAW-VGKVKESIDLFQE 332
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
+ + ML+I A+ L +GRQ+HA + D V N+L+DMYAK G+
Sbjct: 333 LQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGK 392
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+A+R F + ++ + WT++I+ + G ++L+ +M+ + + TF +L A
Sbjct: 393 FEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKA 452
Query: 445 CSHTGLTCEGWELFTDMI-----NKYRILPRAEHFSC-VVDLFARRGQLESAYNMIRQMN 498
++ G +L + +I N Y C ++D++A ++ A +M+
Sbjct: 453 SANLASILLGKQLHSCVIRSGFMNVYS--------GCALLDMYANCASIKDAIKTFEEMS 504
Query: 499 IKPTASLWSAILGACSIYGN 518
+ + W+A+L A + G+
Sbjct: 505 ERNVVT-WNALLSAYAQNGD 523
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 79/161 (49%), Gaps = 9/161 (5%)
Query: 375 LIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
+I Y KSG + A R FD+ ++ V++WT++I Y+K +A +L+ +M G P+
Sbjct: 80 IISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPD 139
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSC--VVDLFARRGQLESAYN 492
VT+++LL C+ + E ++ ++ ++ H C ++D + + G L+SA
Sbjct: 140 YVTYITLLTGCNDLEVAKELYQAHAQIV---KLGHHLNHRVCNTLLDSYFKTGGLDSARR 196
Query: 493 MIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDME 533
+ +M + S I G Y N L E A +M+
Sbjct: 197 LFLEMCGWDSVSFNVMITG----YANNGLNEEAIELFVEMQ 233
>gi|449464466|ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101216349
[Cucumis sativus]
Length = 1830
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 171/555 (30%), Positives = 291/555 (52%), Gaps = 31/555 (5%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
+L+ C + + + +H I+ G + + T +I Y K G V + F+ + ++N
Sbjct: 1224 ILKACSELREIVEGRKVHCQIVKVGGPDSF-VMTGLIDMYGKCGQVECSSAVFEEIMDKN 1282
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG 155
VVSWT+MI+GY QN E L++F+ M + V +N FT S + A ++R L G+ + G
Sbjct: 1283 VVSWTSMIAGYVQNNCAEEGLVLFNRMRDALVESNPFTLGSIINAFTKLRALHQGKWVHG 1342
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD 215
K + F+ + LD+Y KCG DA ++++ + D+VSW MI G +D
Sbjct: 1343 YAIKNIAELSSFLATTFLDMYVKCGQTRDARMIYDELPTIDLVSWTVMIVGYTQARQPND 1402
Query: 216 SFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLID 275
LF +R + P+ L + + +LID
Sbjct: 1403 GLRLFADEIRSDLLPNSALLQVFFQRV-------------------------RFLNALID 1437
Query: 276 VYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDV 335
+YAK +I AY ++ +L+ D+I+ ++ISG+A++ + + +A LF M + D +
Sbjct: 1438 MYAKCHTISDAYAIFHGVLEKDVITWNSMISGYAQNGS-AYDALRLFNQMRSYSLAPDAI 1496
Query: 336 ILCLMLNICANVASLNLGRQIHAFAFKYQ-SSYDAAVGNALIDMYAKSGEIADANRAFDE 394
L L+ A + ++ +G +HA++ K S + +G AL++ YAK G+ A FD
Sbjct: 1497 TLVSTLSASATLGAIQVGSSLHAYSVKGGLFSSNLYIGTALLNFYAKCGDARSARMVFDS 1556
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG 454
MG KN+I+W+++I GY G G ++ ++ M E + PN+V F ++L ACS++G+ EG
Sbjct: 1557 MGVKNIITWSAMIGGYGVQGDGSGSLSIFSNMLKEDLKPNEVIFTTVLSACSYSGMVEEG 1616
Query: 455 WELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACS 514
F MI Y +P +H++C+VDL AR G+L+ A + I++M ++ SL+ A L C
Sbjct: 1617 GRYFKSMIQDYNFVPSMKHYACMVDLLARSGKLDEALDFIKKMPVQRDVSLYGAFLHGCG 1676
Query: 515 IYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGY 574
+Y LGE+ R + + ++ YV++SN+Y + G W + R LM +R L K PGY
Sbjct: 1677 LYSRFDLGEVVVREMLQLHRNEACYYVLVSNLYASDGKWGQVNEVRDLMLQRGLNKVPGY 1736
Query: 575 SFLQSSKKNILLLEP 589
S +++ N + L P
Sbjct: 1737 SLVET---NAVXLMP 1748
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 152/533 (28%), Positives = 251/533 (47%), Gaps = 42/533 (7%)
Query: 53 HAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYD 112
H +I +G NL TK++ Y +GDV SAR FD+MP + +W MI Y N
Sbjct: 1140 HGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPNPDFYAWKVMIRWYFLNDLF 1199
Query: 113 ENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSAL 172
+ + ++ M S + +S L+AC+ +R + GR + I K ++ FV + L
Sbjct: 1200 VDVIPFYNRMRMSFRECDNIIFSIILKACSELREIVEGRKVHCQIVKVGGPDS-FVMTGL 1258
Query: 173 LDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDC 232
+D+Y KCG +E + +FE I K+VVSW +MI G ++ LF M ++ +
Sbjct: 1259 IDMYGKCGQVECSSAVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNRMRDALVESNP 1318
Query: 233 FTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRS 292
FTLGSI+ A L + +H IK E S+ L + +D+Y K G R A +Y
Sbjct: 1319 FTLGSIINAFTKLRALHQGKWVHGYAIKNIAELSSFLATTFLDMYVKCGQTRDARMIYDE 1378
Query: 293 MLKTDIISCTALISGF--ARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
+ D++S T +I G+ AR N + LF D I ++ N A L
Sbjct: 1379 LPTIDLVSWTVMIVGYTQARQPN---DGLRLFADEIRS-------------DLLPNSALL 1422
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
+ Q F NALIDMYAK I+DA F + +K+VI+W S+I+GY
Sbjct: 1423 QVFFQRVRFL------------NALIDMYAKCHTISDAYAIFHGVLEKDVITWNSMISGY 1470
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
A++G ++A+ L+ +M+ + P+ +T +S L A + G G L +
Sbjct: 1471 AQNGSAYDALRLFNQMRSYSLAPDAITLVSTLSASATLGAIQVGSSLHAYSVKGGLFSSN 1530
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
+ +++ +A+ G SA + M +K + WSA++G + G+ S N+
Sbjct: 1531 LYIGTALLNFYAKCGDARSARMVFDSMGVKNIIT-WSAMIGGYGVQGDGSGSLSIFSNML 1589
Query: 531 --DMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSK 581
D++P + + VLS + + R + ++++ Y+F+ S K
Sbjct: 1590 KEDLKPNEVIFTTVLSACSYSGMVEEGGRYFKSMIQD--------YNFVPSMK 1634
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 125/265 (47%), Gaps = 18/265 (6%)
Query: 253 QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDD 312
+ H L+I GL + L+ VY G +RSA ++ M D + +I + +D
Sbjct: 1138 KFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPNPDFYAWKVMIRWYFLND 1197
Query: 313 NHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG 372
+ + M + D++I ++L C+ + + GR++H K D+ V
Sbjct: 1198 LFV-DVIPFYNRMRMSFRECDNIIFSIILKACSELREIVEGRKVHCQIVKVGGP-DSFVM 1255
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
LIDMY K G++ ++ F+E+ DKNV+SWTS+IAGY ++ E + L+ +M+ +
Sbjct: 1256 TGLIDMYGKCGQVECSSAVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNRMRDALVE 1315
Query: 433 PNDVTFLSLLFACSHTGLTCEG-WELFTDMINKYRILPRAEHFS----CVVDLFARRGQL 487
N T S++ A + +G W ++ Y I AE S +D++ + GQ
Sbjct: 1316 SNPFTLGSIINAFTKLRALHQGKW------VHGYAIKNIAELSSFLATTFLDMYVKCGQT 1369
Query: 488 ESAYNMIRQMNIKPTASL--WSAIL 510
A + ++ PT L W+ ++
Sbjct: 1370 RDARMIYDEL---PTIDLVSWTVMI 1391
>gi|125555425|gb|EAZ01031.1| hypothetical protein OsI_23065 [Oryza sativa Indica Group]
Length = 671
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 178/553 (32%), Positives = 300/553 (54%), Gaps = 9/553 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T +L+ C K +HA + G + + ++ ++ YAK G V S+ +AF
Sbjct: 107 TVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRAFVLT 166
Query: 92 PERNVVSWTAMIS---GYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
P+R+V+SWT+MI+ + +GY + A+++F ML V T+S L+ L
Sbjct: 167 PQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSCILKVFDVPELLP 226
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ + G + K + + +ALL +Y +CG +++ L RI R D S +++ A
Sbjct: 227 SGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMDEITRLACRI-RHDAFSRTSLLTAYA 285
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G N ++ +FR M+ M D + S+L+ +L + +IH +K
Sbjct: 286 RNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTL 345
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
L +++ VY K G I S+ ++ ++ D IS TAL++ + ++D S+EA F++M+ K
Sbjct: 346 LLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTALLTCYVQND-LSQEALFFFREMVRK 404
Query: 329 KMGIDDVILCL--MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
G++ I C+ +L C+ +SL+ G QIH+ K D +V NAL+ MYAK G +
Sbjct: 405 --GLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQ 462
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A + F+ ++ +ISW +LI +++HG AI+L+ M+ E + P+D TF+ LL +CS
Sbjct: 463 VALKIFNSTRNRGIISWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCS 522
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
GL EG E F M KY + P+ EH++C+VDLFAR G+ A I M +P +W
Sbjct: 523 RMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQLVW 582
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
A+L +C ++GN LG +AA+ + +++PE Y++LS+I+ + WD + R L++ +
Sbjct: 583 EALLASCRVHGNLDLGRMAAKKILEIKPEDPSPYIILSSIHASIDMWDEKARNRTLLDFQ 642
Query: 567 SLRKNPGYSFLQS 579
LRK+ G S L S
Sbjct: 643 QLRKDVGSSQLDS 655
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 145/505 (28%), Positives = 259/505 (51%), Gaps = 17/505 (3%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H + G ++ +L +++ Y G + AR FD MP RNVVSW+ +I ++ G
Sbjct: 24 VHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIVASSRLGV 83
Query: 112 DENALLVFSAMLRSGVR--ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK 169
+AL +F+ MLR G R N FT ++ + CAR + G + S K E+ V
Sbjct: 84 LGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVA 143
Query: 170 SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ---GFNDDSFWLFRSMMRQ 226
L+D+YAKCG + +W F ++ V+SW +MI L G+ D + LF+ M+
Sbjct: 144 GTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLVL 203
Query: 227 GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSA 286
+ P T IL+ L Q+H ++K+G E L +L+ +Y + G +
Sbjct: 204 KVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMDEI 263
Query: 287 YQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICAN 346
+L ++ D S T+L++ +AR + + EA +F+DM++ M ID + +L +C++
Sbjct: 264 TRLA-CRIRHDAFSRTSLLTAYAR-NGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSS 321
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
+ L + ++IH +A K D + NA++ +Y K G+IA + F+ + +K+ ISWT+L
Sbjct: 322 LGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTAL 381
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYR 466
+ Y ++ EA+ +++M +G+ + S+L ACS T GW++ + ++ K
Sbjct: 382 LTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVV-KLG 440
Query: 467 ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAA 526
+ + +V ++A+ G ++ A + + S W+A++ + S +GN E+AA
Sbjct: 441 VDDDTSVENALVTMYAKCGVVQVALKIFNSTRNRGIIS-WNALITSFSQHGN----EVAA 495
Query: 527 RNLFDMEPEKSVNYVVLSNIYTAAG 551
LFDM E+ +V + YT G
Sbjct: 496 IQLFDMMQEE----MVCPDDYTFVG 516
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 129/267 (48%), Gaps = 1/267 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D S SLLQ C R IH + + N + + L ++ Y K GD+ S+
Sbjct: 307 IDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIV 366
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F+ + ++ +SWTA+++ Y QN + AL F M+R G+ ++ F +S LRAC+ L
Sbjct: 367 FNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSL 426
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G I + K ++ V++AL+ +YAKCG ++ A +F + ++SWNA+I
Sbjct: 427 SCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSTRNRGIISWNALITSF 486
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESS 266
+ G + LF M + + PD +T +L + S G+ + K LE
Sbjct: 487 SQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEPK 546
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ ++D++A+ G A + +M
Sbjct: 547 MEHYTCMVDLFARAGRFSDAMKFIDAM 573
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 176/364 (48%), Gaps = 7/364 (1%)
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
R + G+ K + + ++ + LL Y G + DA +F+ + R++VVSW+ +I +
Sbjct: 22 RAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIVASSRL 81
Query: 211 GFNDDSFWLFRSMMRQGM--KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G D+ LF M+R G +P+ FT+ +++ + + Q+H +KLG++
Sbjct: 82 GVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDES 141
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR--DDNHSKEAFDLFKDMI 326
+ G+L+D+YAK G + S+++ + + ++S T++I+ D + A LFK M+
Sbjct: 142 VAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKML 201
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ K+ + +L + L G+Q+H K + D A+G AL+ MY + G +
Sbjct: 202 VLKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMD 261
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
+ R + + S TSL+ YA++G EA+ +++ M M + SLL CS
Sbjct: 262 EITRLACRI-RHDAFSRTSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCS 320
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
G E+ + + L + +V ++ + G + S+ + + K T S W
Sbjct: 321 SLGQLRVVKEIHCYALKNFFRLDTLL-LNAIVTVYGKCGDIASSEIVFNTLENKDTIS-W 378
Query: 507 SAIL 510
+A+L
Sbjct: 379 TALL 382
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 81/176 (46%), Gaps = 8/176 (4%)
Query: 354 RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKH 413
R +H A K + N L+ Y G +ADA FDEM +NV+SW+ LI ++
Sbjct: 22 RAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIVASSRL 81
Query: 414 GYGHEAIELYKKMKHEGM--VPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
G +A+ L+ M G PN T +L+ C+ G ++ + K +
Sbjct: 82 GVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAV-KLGVDEDE 140
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL--WSAILGACSIYGNTSLGELA 525
+VD++A+ G++ S++ R + P S+ W++++ +G++ + A
Sbjct: 141 SVAGTLVDMYAKCGRVGSSW---RAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTA 193
>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 280/527 (53%), Gaps = 36/527 (6%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H I +G+ES+LHL+ ++ YAK G++ SA F MPE +VVSW MI+GY Q
Sbjct: 245 VHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQ 304
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
A+ M G ++ TY + L AC + G I+ GR
Sbjct: 305 SSKAIEYLQRMQYHGFEPDEITYVNMLVACIK----------SGDIEAGR---------- 344
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
+F+ + + SWN ++ G + + ++ LFR M + + PD
Sbjct: 345 ---------------QMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPD 389
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
TL IL + G + L Q+H + K + L LI +Y+K G + A +++
Sbjct: 390 RTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFD 449
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
+ + DI+ ++++G + + + KEAF FK M K M +L+ CA ++SL+
Sbjct: 450 RIAELDIVCWNSMMAGLSLN-SLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLS 508
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
GRQ+H+ + DA VG+ALIDMY+K G++ A FD M KN ++W +I GYA
Sbjct: 509 QGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYA 568
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
++G G EA+ LY+ M G P+ +TF+++L ACSH+GL G ++F M ++ + P
Sbjct: 569 QNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLV 628
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
+H++C++D R G+L A +I +M K +W +L +C +Y + SL AA LF
Sbjct: 629 DHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFH 688
Query: 532 MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
++P+ S YV+L+NIY++ G WD+A+ R+LM + K+PGYS+++
Sbjct: 689 LDPQNSAPYVLLANIYSSLGRWDDAKAVRELMSYNQVVKDPGYSWIE 735
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 139/505 (27%), Positives = 246/505 (48%), Gaps = 61/505 (12%)
Query: 31 STYM-SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFD 89
+TY+ SLLQ CIDKKA LIHAH++ + + LS ++I FYAK + ++R+ FD
Sbjct: 5 TTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFD 64
Query: 90 RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALR--ACARMRWL 147
+MP+R++ +W A++ Y + E+A ++F+ M + + S+ R AC + +
Sbjct: 65 QMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVDV 124
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ GR G K N++V +ALL +YAKC I DA F + + VS+ AM+GGL
Sbjct: 125 ECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGL 184
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL----RASVGGIEL----------MKISQ 253
A +++F LFR M+R + D +L S+L R G L + Q
Sbjct: 185 ADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQ 244
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN 313
+H L IK G ES L SL+D+YAK G++ SA ++ +M + ++S +I+G+ +
Sbjct: 245 VHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQ 304
Query: 314 HSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN 373
SK A + + M D++ ML C
Sbjct: 305 SSK-AIEYLQRMQYHGFEPDEITYVNMLVAC----------------------------- 334
Query: 374 ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP 433
KSG+I + FD M ++ SW ++++GY+++ EA++L+++M+ + P
Sbjct: 335 ------IKSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHP 388
Query: 434 NDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA--- 490
D T L+++ + + EG + K S ++ ++++ G++E A
Sbjct: 389 -DRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRI 447
Query: 491 YNMIRQMNIKPTASLWSAILGACSI 515
++ I +++I W++++ S+
Sbjct: 448 FDRIAELDI----VCWNSMMAGLSL 468
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 139/262 (53%), Gaps = 5/262 (1%)
Query: 47 RQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGY 106
RQ H + + + ++++L++ +I Y+K G V A++ FDR+ E ++V W +M++G
Sbjct: 410 RQVHAVSQKAV---FRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGL 466
Query: 107 AQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENL 166
+ N D+ A F M G+ +QF+Y++ L CA++ L GR + I + ++ +
Sbjct: 467 SLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDA 526
Query: 167 FVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ 226
FV SAL+D+Y+KCG ++ A +F+ + K+ V+WN MI G A G D++ L+ M+
Sbjct: 527 FVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGS 586
Query: 227 GMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRS 285
G KPD T ++L A S G+ I + + + G+E +ID + G +
Sbjct: 587 GEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHE 646
Query: 286 AYQLYRSM-LKTDIISCTALIS 306
A L M K D I L+S
Sbjct: 647 AEVLIDKMPCKYDPIIWEVLLS 668
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 102/195 (52%), Gaps = 4/195 (2%)
Query: 14 KQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKV 71
K+A F + + PS +Y ++L C + Q +H+ I GY ++ + + +
Sbjct: 473 KEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSAL 532
Query: 72 IIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQ 131
I Y+K GDV +AR FD M +N V+W MI GYAQNG + A+L++ M+ SG + +
Sbjct: 533 IDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDG 592
Query: 132 FTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK-SALLDLYAKCGWIEDAWILFE 190
T+ + L AC+ + G I S+Q+ VE L + ++D + G + +A +L +
Sbjct: 593 ITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLID 652
Query: 191 RIERK-DVVSWNAMI 204
++ K D + W ++
Sbjct: 653 KMPCKYDPIIWEVLL 667
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 191/653 (29%), Positives = 317/653 (48%), Gaps = 104/653 (15%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVG------------- 79
Y LLQ C IHAH + G + +L ++ +YA VG
Sbjct: 212 YARLLQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLF 271
Query: 80 -DVLSARK-----------------------AFDRMPERNVVSWTAMISGYAQNGYDENA 115
D+ AR+ F MP+R+ VSWT MI G ++G +A
Sbjct: 272 DDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDA 331
Query: 116 LLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDL 175
+ F M+ G +QFT ++ L +CA M GR + + K + V +++L +
Sbjct: 332 VKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYM 391
Query: 176 YAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG-------- 227
Y KCG E A +FER++ + V SWN M+ QG + + +F +M+ +
Sbjct: 392 YGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTII 451
Query: 228 ------------------------MKPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLG 262
M+PD FT+ S+L A + ++K+ Q+H I++ G
Sbjct: 452 AGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSA-CANLRMLKMGKQMHSYILRTG 510
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD--IISCTALISGFAR--DDNHSKEA 318
+ S+++ +LI YAK GS+ +A ++ + D +IS TAL+ G+ + D ++E
Sbjct: 511 MPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREI 570
Query: 319 FD----------------------------LFKDMILKKMGIDDVILCLMLNICANVASL 350
FD LF+ MIL + L +L+ CA++A L
Sbjct: 571 FDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYL 630
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAG 409
+ G+QIH A + +V NA+I +YA+SG + A R FD++ K I+WTS+I
Sbjct: 631 DYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVA 690
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
A+HG G +A+ L+++M G+ P+ +T++ +L AC+H G +G + M N++ I+P
Sbjct: 691 MAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVP 750
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
+ H++C+VDL AR G L A+ I++M + P +W ++L AC + N L ELAA L
Sbjct: 751 QMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKL 810
Query: 530 FDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
++P S Y L+N+Y+A G W++A + KL +++ ++K G+S+ K
Sbjct: 811 LSIDPHNSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGK 863
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 124/475 (26%), Positives = 214/475 (45%), Gaps = 79/475 (16%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
++G+ A+K L PS T ++L C +A +H ++ G S +
Sbjct: 324 RSGRFWDAVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVP 383
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMIS---------------------- 104
++ V+ Y K GD +AR F+RM R+V SW M+S
Sbjct: 384 VANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERS 443
Query: 105 ---------GYAQNGYDENALLVFSAMLR-SGVRANQFTYSSALRACARMRWLQGGRMIQ 154
GY QNG D AL FS ML S + + FT +S L ACA +R L+ G+ +
Sbjct: 444 IVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMH 503
Query: 155 -------------------------GSIQKGRFVE--------NLFVKSALLDLYAKCGW 181
GS++ R + N+ +ALL+ Y K G
Sbjct: 504 SYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGD 563
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
+ A +F+ + +DV++W AMI G G ND++ LFRSM+ G +P+ TL ++L A
Sbjct: 564 TKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSA 623
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML-KTDIIS 300
L QIH I+ E S ++ ++I VYA+ GS+ A +++ + + + I+
Sbjct: 624 CASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETIT 683
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH--- 357
T++I A+ ++A LF++M+ + D + +L+ CA+ ++ G++ +
Sbjct: 684 WTSMIVAMAQ-HGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQM 742
Query: 358 --AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAG 409
Q S+ A ++D++A++G + +A+ M + + W SL+A
Sbjct: 743 QNEHGIVPQMSHYA----CMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAA 793
>gi|147769567|emb|CAN65709.1| hypothetical protein VITISV_020733 [Vitis vinifera]
Length = 609
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 185/550 (33%), Positives = 297/550 (54%), Gaps = 5/550 (0%)
Query: 28 LDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
L+P+ T+ S+ + C + + ++H H++ + ++++L + T V+ Y K + A
Sbjct: 50 LEPNNLTFPSVAKACSKLLNLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAY 109
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
F RMP R+V SW +MI G+AQ G+ + + +F M G+RA+ T + ++
Sbjct: 110 NLFSRMPXRDVASWNSMIXGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLK 169
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER--KDVVSWNAM 203
L+ I K ++ V + + YAKCG A +F+ I++ K VSWN+M
Sbjct: 170 DLKMLESIHSFGIKIGIDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTXVSWNSM 229
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGL 263
I G A + F+ M+ G + D T+ S+L + V L IH I++G
Sbjct: 230 IAGYAHFEQCSKAVGFFKKMLXGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGC 289
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
+S ++ +LI +Y+K G I SA L+ +ML +S TA+I+G A + EA LF
Sbjct: 290 DSDIQVINTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGXAEKGDLD-EAMTLFS 348
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
M D V + +++ C +L LG+ I +A + V NALID+YAK G
Sbjct: 349 AMEAVGEKPDLVTIISLMSGCGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAKCG 408
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
+ +A F M +K+++SWT+LIAG A +G EA+ L+ +M G+ PN +TFL++L
Sbjct: 409 SMDNARELFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQ 468
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
AC+H G +GWE F M Y+I P +H+SC+ DL R+G+L+ A+ I+ M KP
Sbjct: 469 ACNHAGFLEKGWECFNLMTKVYKINPGLDHYSCMADLLGRKGRLKEAFEFIQNMPFKPDV 528
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
+WS +L AC I+ N +GE A +LF++EP+ +V YV ++NIY +AG WD R +M
Sbjct: 529 GIWSVLLSACKIHQNVVIGECVAYHLFELEPQTAVPYVQMANIYASAGKWDRVAAIRTMM 588
Query: 564 EERSLRKNPG 573
+ K+ G
Sbjct: 589 KCNKAMKSSG 598
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 146/502 (29%), Positives = 249/502 (49%), Gaps = 22/502 (4%)
Query: 83 SARKAFDRMPER-NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC 141
+A ++F+R V W + I+ GY ALL+F M ++G+ N T+ S +AC
Sbjct: 5 AATQSFNRFSNLWTVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKAC 64
Query: 142 ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN 201
+++ L+ +++ + K RF +LFV+++++D+Y KC + A+ LF R+ +DV SWN
Sbjct: 65 SKLLNLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPXRDVASWN 124
Query: 202 AMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKL 261
+MI G A GF D LF M +G++ D T+ + +++ +L + IH IK+
Sbjct: 125 SMIXGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKI 184
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM---LKTDIISCTALISGFARDDNHSKEA 318
G+++ ++ + I YAK G A ++ + LKT +S ++I+G+A + SK A
Sbjct: 185 GIDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKT-XVSWNSMIAGYAHFEQCSK-A 242
Query: 319 FDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDM 378
FK M+ D + +L+ C L G+ IHA + D V N LI M
Sbjct: 243 VGFFKKMLXGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISM 302
Query: 379 YAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTF 438
Y+K G+I A FD M K +SWT++IAG A+ G EA+ L+ M+ G P+ VT
Sbjct: 303 YSKCGDIGSARYLFDNMLGKTRVSWTAMIAGXAEKGDLDEAMTLFSAMEAVGEKPDLVTI 362
Query: 439 LSLLFACSHTG-LTCEGWELFTDMINKYRILP--RAEHFSC--VVDLFARRGQLESAYNM 493
+SL+ C TG L W I+ Y + C ++D++A+ G +++A +
Sbjct: 363 ISLMSGCGQTGALELGKW------IDTYATANGLKDNLMVCNALIDVYAKCGSMDNAREL 416
Query: 494 IRQMNIKPTASLWSAILGACSIYGN--TSLGELAARNLFDMEPEKSVNYVVLSNIYTAAG 551
M K S W+ ++ C++ G +LG ++P + ++ + AG
Sbjct: 417 FYTMPEKSLVS-WTTLIAGCALNGEFKEALGLFFQMVELGLKPNH-ITFLAVLQACNHAG 474
Query: 552 AWDNARKTRKLMEERSLRKNPG 573
+ + LM + + NPG
Sbjct: 475 FLEKGWECFNLM-TKVYKINPG 495
>gi|224090799|ref|XP_002309086.1| predicted protein [Populus trichocarpa]
gi|222855062|gb|EEE92609.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 164/515 (31%), Positives = 284/515 (55%), Gaps = 13/515 (2%)
Query: 75 YAKVGDVLSARKAFDRMPE--RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQF 132
YAK + A +R + RNV ++ A+ISG+ NG ++ L + M ++GV +++
Sbjct: 2 YAKCNQMNQALLVLNRTADYARNVFAYNALISGFVLNGLPQDGLGAYEEMRQAGVLPDKY 61
Query: 133 TYSSALRA-CARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER 191
T+ ++ C M Q + I G ++K +++V S+L+ Y K +++A LF+
Sbjct: 62 TFPCLIKGLCEVMEVFQVKK-IHGLVRKLGLDLDMYVGSSLVSSYLKSELMKEARELFDE 120
Query: 192 IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI 251
I +DVV WN+M+ G A G D++ + R M ++G+ FT+ +L G +
Sbjct: 121 IPDRDVVLWNSMVNGYAQIGRFDEALGVCREMSQEGVLMSKFTVSGVLSVFAGRGDFDNG 180
Query: 252 SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD 311
+H +IK+G +S + +LID+Y K + A +++ +M + DI S +++S
Sbjct: 181 RLVHGFMIKMGFDSCVSVCNALIDMYGKCRCVVDALEIFETMNEKDIFSWNSILSANELC 240
Query: 312 DNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF--------KY 363
+H LF M+ + +D V + +L C+++A+L GR+IH + +
Sbjct: 241 SDHDG-TLRLFDRMLGDGVQLDLVTITTILPACSHLAALVHGREIHGYMIVNGFVKDGES 299
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELY 423
++ Y+ NAL+DMYAK G + DA F M +++ SW +I GY HGYG+EA+ ++
Sbjct: 300 ENMYNLQTINALMDMYAKCGSMRDAGMVFYNMSNRDTASWNIMIMGYGMHGYGNEALYMF 359
Query: 424 KKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFAR 483
M G+ PN++TF+ +L ACSH G +G + +M K+ ++P +H++CV+D+ R
Sbjct: 360 SDMCKSGLKPNEITFVGVLLACSHAGFISQGIKFLGEMELKHGVVPTIQHYTCVIDMLGR 419
Query: 484 RGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVL 543
GQLE AY + M I+ +W A+L AC +YGN L E+AA+ +F++ P NYV++
Sbjct: 420 AGQLEEAYKLAVTMPIQTNPVVWRALLAACQLYGNVDLAEVAAQKVFELNPAHCGNYVLM 479
Query: 544 SNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
SN Y AAG + R M ++ ++K PG S+++
Sbjct: 480 SNAYVAAGRYQEVLDIRHTMRQQDVKKTPGCSWIE 514
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 194/399 (48%), Gaps = 11/399 (2%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
L D T+ L++ + Q IH + G + ++++ + ++ Y K + AR
Sbjct: 56 VLPDKYTFPCLIKGLCEVMEVFQVKKIHGLVRKLGLDLDMYVGSSLVSSYLKSELMKEAR 115
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
+ FD +P+R+VV W +M++GYAQ G + AL V M + GV ++FT S L A
Sbjct: 116 ELFDEIPDRDVVLWNSMVNGYAQIGRFDEALGVCREMSQEGVLMSKFTVSGVLSVFAGRG 175
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
GR++ G + K F + V +AL+D+Y KC + DA +FE + KD+ SWN+++
Sbjct: 176 DFDNGRLVHGFMIKMGFDSCVSVCNALIDMYGKCRCVVDALEIFETMNEKDIFSWNSILS 235
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGL-- 263
+ +D + LF M+ G++ D T+ +IL A L+ +IH +I G
Sbjct: 236 ANELCSDHDGTLRLFDRMLGDGVQLDLVTITTILPACSHLAALVHGREIHGYMIVNGFVK 295
Query: 264 --ESSN----KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKE 317
ES N + +L+D+YAK GS+R A ++ +M D S +I G+ + E
Sbjct: 296 DGESENMYNLQTINALMDMYAKCGSMRDAGMVFYNMSNRDTASWNIMIMGYGM-HGYGNE 354
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDAAVGNALI 376
A +F DM + +++ +L C++ ++ G + + K+ +I
Sbjct: 355 ALYMFSDMCKSGLKPNEITFVGVLLACSHAGFISQGIKFLGEMELKHGVVPTIQHYTCVI 414
Query: 377 DMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHG 414
DM ++G++ +A + M N + W +L+A +G
Sbjct: 415 DMLGRAGQLEEAYKLAVTMPIQTNPVVWRALLAACQLYG 453
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 176/534 (32%), Positives = 282/534 (52%), Gaps = 33/534 (6%)
Query: 81 VLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS-GVRANQFTYSSALR 139
V + F MPER+ VS+ A+I+G++ G ++ ++ A+LR VR + T S+ +
Sbjct: 95 VPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIM 154
Query: 140 ACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVV- 198
+ + G + + + F FV S L+D+YAK G I DA +F+ +E K VV
Sbjct: 155 VASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVM 214
Query: 199 ------------------------------SWNAMIGGLAMQGFNDDSFWLFRSMMRQGM 228
+W M+ GL G ++ +FR M +G+
Sbjct: 215 YNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGV 274
Query: 229 KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQ 288
D +T GSIL A L + QIH I + E + + +L+D+Y+K SIR A
Sbjct: 275 GIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEA 334
Query: 289 LYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
++R M +IIS TA+I G+ ++ S+EA F +M + + DD L +++ CAN+A
Sbjct: 335 VFRRMTCRNIISWTAMIVGYGQNAC-SEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLA 393
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA 408
SL G Q H A V NAL+ +Y K G I DA+R FDEM + +SWT+L+
Sbjct: 394 SLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVT 453
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
GYA+ G E I+L++KM G+ P+ VTF+ +L ACS GL +G + F M + I+
Sbjct: 454 GYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIV 513
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARN 528
P +H++C++DL++R G+ + A I+QM P A W+ +L +C + GN +G+ AA N
Sbjct: 514 PIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAEN 573
Query: 529 LFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
L + +P+ +YV+L +++ A G W R+ M +R ++K PG S+++ K
Sbjct: 574 LLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNK 627
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 191/400 (47%), Gaps = 48/400 (12%)
Query: 49 AHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP---------------- 92
H +H ++ G+ + + + ++ YAK+G + AR+ F M
Sbjct: 165 GHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLR 224
Query: 93 ---------------ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSA 137
+R+ ++WT M++G QNG AL VF M GV +Q+T+ S
Sbjct: 225 CKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSI 284
Query: 138 LRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDV 197
L AC + L+ G+ I I + + +N+FV SAL+D+Y+KC I A +F R+ +++
Sbjct: 285 LTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNI 344
Query: 198 VSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDL 257
+SW AMI G ++++ F M G+KPD FTLGS++ + L + +Q H L
Sbjct: 345 ISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCL 404
Query: 258 IIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKE 317
+ GL ++ +L+ +Y K GSI A++L+ M D +S TAL++G+A+ +KE
Sbjct: 405 ALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQ-FGKAKE 463
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG----- 372
DLF+ M+ + D V +L+ C+ + G Y S G
Sbjct: 464 TIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKG-------CDYFDSMQKDHGIVPID 516
Query: 373 ---NALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIA 408
+ID+Y++SG +A +M + W +L++
Sbjct: 517 DHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLS 556
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 187/389 (48%), Gaps = 41/389 (10%)
Query: 165 NLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMM 224
NLF ++ALL A + D LF + +D VS+NA+I G + G S L+R+++
Sbjct: 78 NLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALL 137
Query: 225 R-QGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
R + ++P TL +++ + + +H +++LG + + L+D+YAK G I
Sbjct: 138 REESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLI 197
Query: 284 RSAYQLYRSMLKTDIISCTALISGFAR------------------------------DDN 313
R A ++++ M ++ LI+G R +
Sbjct: 198 RDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNG 257
Query: 314 HSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN 373
EA D+F+ M + +GID +L C +A+L G+QIHA+ + + VG+
Sbjct: 258 LQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGS 317
Query: 374 ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP 433
AL+DMY+K I A F M +N+ISWT++I GY ++ EA+ + +M+ +G+ P
Sbjct: 318 ALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKP 377
Query: 434 NDVTFLSLLFACSHTGLTCEGWEL----FTDMINKYRILPRAEHFSCVVDLFARRGQLES 489
+D T S++ +C++ EG + + +Y + A +V L+ + G +E
Sbjct: 378 DDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNA-----LVTLYGKCGSIED 432
Query: 490 AYNMIRQMNIKPTASLWSAILGACSIYGN 518
A+ + +M+ S W+A++ + +G
Sbjct: 433 AHRLFDEMSFHDQVS-WTALVTGYAQFGK 460
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 131/267 (49%), Gaps = 1/267 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D T+ S+L C A + IHA+I YE N+ + + ++ Y+K + A
Sbjct: 276 IDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAV 335
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F RM RN++SWTAMI GY QN E A+ FS M G++ + FT S + +CA + L
Sbjct: 336 FRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASL 395
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G + + V +AL+ LY KCG IEDA LF+ + D VSW A++ G
Sbjct: 396 EEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGY 455
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESS 266
A G ++ LF M+ G+KPD T +L A S G+ + G+
Sbjct: 456 AQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPI 515
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ +ID+Y++ G + A + + M
Sbjct: 516 DDHYTCMIDLYSRSGRFKEAEEFIKQM 542
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 150/336 (44%), Gaps = 42/336 (12%)
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
P F L +L A L + ++ D + L + N L +L A + +L
Sbjct: 46 PPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSAL----AHSRLVPDMERL 101
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK-MGIDDVILCLMLNICANVA 348
+ SM + D +S ALI+GF+ + ++ + L++ ++ ++ + + L M+ + + ++
Sbjct: 102 FASMPERDAVSYNALITGFSSTGSPAR-SVQLYRALLREESVRPTRITLSAMIMVASALS 160
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG------------ 396
LG +H + A VG+ L+DMYAK G I DA R F EM
Sbjct: 161 DRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLIT 220
Query: 397 -------------------DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVT 437
D++ I+WT+++ G ++G EA++++++M+ EG+ + T
Sbjct: 221 GLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYT 280
Query: 438 FLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
F S+L AC EG ++ I + S +VD++++ + A + R+M
Sbjct: 281 FGSILTACGALAALEEGKQIHA-YITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRM 339
Query: 498 NIKPTASLWSAILGACSIYGNTSLGELAARNLFDME 533
+ S + I+G YG + E A R +M+
Sbjct: 340 TCRNIISWTAMIVG----YGQNACSEEAVRAFSEMQ 371
>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Brachypodium distachyon]
Length = 689
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 180/571 (31%), Positives = 304/571 (53%), Gaps = 16/571 (2%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAH---IITNGYESNLHLSTKVIIFYAKVGD 80
P DP + + I ++ R HA +++ G + ++ Y+K+
Sbjct: 3 PAAAADPQLLGAAFEAAISSRSPRLGRAAHARALRLLSPGLPP--FICAHLVNLYSKLDL 60
Query: 81 VLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRA 140
+A A P VVS+TA ISG AQ+ AL F+AMLR G+R N FT+ SA +A
Sbjct: 61 PAAAASALASDPNPTVVSFTAFISGAAQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKA 120
Query: 141 --CARMRWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDV 197
CA R G I +++ G + FV A +D+Y K G + A LFE + ++V
Sbjct: 121 AACAPPRCSTVGPQIHALALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNV 180
Query: 198 VSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDL 257
++WNA++ + G ++F + + G P+ ++ + A G + L Q H
Sbjct: 181 IAWNAVMTNAVIDGRPLETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGF 240
Query: 258 IIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKE 317
++ G + ++ +++D Y K A ++ M + +S ++I +A+ H E
Sbjct: 241 VVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQ---HGAE 297
Query: 318 AFDLFKDMILKKMGID--DVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNAL 375
L M + G + D ++ +L CA + LN GR +HA A + + V +AL
Sbjct: 298 EDALAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASAL 357
Query: 376 IDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM-KHEGMVPN 434
+DMY K G + DA + F +M ++N+++W ++I GYA G A+ ++ M + G PN
Sbjct: 358 VDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPN 417
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI 494
+T ++++ ACS GLT +G+ELF M ++ + PR EH++CVVDL R G E AY +I
Sbjct: 418 HITLVNVITACSRGGLTKDGYELFDTMRERFGVEPRTEHYACVVDLLGRAGMEERAYEII 477
Query: 495 RQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWD 554
++M ++P+ S+W A+LGAC ++G T LG +A+ LF+++P+ S N+V+LSN+ +AG W
Sbjct: 478 QRMPMRPSISVWGALLGACKMHGKTELGRIASEKLFELDPQDSGNHVLLSNMLASAGRWA 537
Query: 555 NARKTRKLMEERSLRKNPGYSFLQSSKKNIL 585
A RK M+ ++K PG S++ + KN++
Sbjct: 538 EATDVRKEMKNVGIKKEPGCSWI--TWKNVV 566
>gi|225468012|ref|XP_002270478.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 602
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 164/479 (34%), Positives = 270/479 (56%), Gaps = 5/479 (1%)
Query: 107 AQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENL 166
A++ AL F M SG + +F +AL +CA++ G I I + F +NL
Sbjct: 77 AKHANVREALESFWRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNL 136
Query: 167 FVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ 226
F+ SAL+DLYAKC I DA +F+ +E+ D VSW ++I G + G ++ F+ M+
Sbjct: 137 FLNSALVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGS 196
Query: 227 GMKPDCFTLGSILRASVGGIELM--KISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIR 284
+KP+C T S++ A G +E + + + +H ++KLG + LID Y+K G I
Sbjct: 197 QIKPNCVTYVSVISACTG-LETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRID 255
Query: 285 SAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNIC 344
A L+ + ++ D I ++ISG++++ +EA LF +M + D L +LN C
Sbjct: 256 QAVLLFGTTIERDNILFNSMISGYSQN-LFGEEALKLFVEMRNNGLNPTDHTLTSILNAC 314
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWT 404
++ L GRQ+H+ K S + V +AL+DMY+K G I +A FD+ +KN + WT
Sbjct: 315 GSLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARCVFDQAVEKNTVLWT 374
Query: 405 SLIAGYAKHGYGHEAIELYKKM-KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMIN 463
S+I GYA+ G G E + L++++ EG P+ + F ++L AC+H G +G + F M
Sbjct: 375 SMITGYAQSGRGPEGLGLFERLVTEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMRR 434
Query: 464 KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGE 523
Y ++P + ++C+VDL+ R G L A ++ + +P + +W + L +C +YG LG
Sbjct: 435 DYGLVPDLDQYACLVDLYVRNGHLRKAKELMEAIPCEPNSVMWGSFLSSCKLYGEAELGR 494
Query: 524 LAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
AA LF MEP + YV +++IY AG W + RKLM+++ LRK+ G+S+++ K+
Sbjct: 495 EAADKLFKMEPCSTAPYVAMASIYAQAGLWSEVVEIRKLMKQKGLRKSAGWSWVEVDKR 553
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 199/389 (51%), Gaps = 8/389 (2%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IHA II G+E NL L++ ++ YAK ++ A++ FD M + + VSWT++ISG+++NG
Sbjct: 123 IHARIIQTGFEDNLFLNSALVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGR 182
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWL-QGGRMIQGSIQKGRFVENLFVKS 170
+ A+L F ML S ++ N TY S + AC + + ++ + K F FV S
Sbjct: 183 GKEAILFFKEMLGSQIKPNCVTYVSVISACTGLETIFDQCALLHAHVVKLGFGVKTFVVS 242
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
L+D Y+KCG I+ A +LF +D + +N+MI G + F +++ LF M G+ P
Sbjct: 243 CLIDCYSKCGRIDQAVLLFGTTIERDNILFNSMISGYSQNLFGEEALKLFVEMRNNGLNP 302
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
TL SIL A L + Q+H L+ K+G ES+ + +L+D+Y+K GSI A ++
Sbjct: 303 TDHTLTSILNACGSLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARCVF 362
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK-MGIDDVILCLMLNICANVAS 349
++ + + T++I+G+A+ E LF+ ++ ++ D + +L C +
Sbjct: 363 DQAVEKNTVLWTSMITGYAQ-SGRGPEGLGLFERLVTEEGFTPDHICFTAVLTACNHAGF 421
Query: 350 LNLG-RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLI 407
L+ G + Y D L+D+Y ++G + A + + + N + W S +
Sbjct: 422 LDKGIDYFNQMRRDYGLVPDLDQYACLVDLYVRNGHLRKAKELMEAIPCEPNSVMWGSFL 481
Query: 408 AG---YAKHGYGHEAIELYKKMKHEGMVP 433
+ Y + G EA + KM+ P
Sbjct: 482 SSCKLYGEAELGREAADKLFKMEPCSTAP 510
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 149/297 (50%), Gaps = 5/297 (1%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCID-KKAERQAHLIHAHIIT 58
+I+ K G+ K+A+ F + + P+ TY+S++ C + Q L+HAH++
Sbjct: 172 SIISGFSKNGRGKEAILFFKEMLGSQIKPNCVTYVSVISACTGLETIFDQCALLHAHVVK 231
Query: 59 NGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLV 118
G+ + + +I Y+K G + A F ER+ + + +MISGY+QN + E AL +
Sbjct: 232 LGFGVKTFVVSCLIDCYSKCGRIDQAVLLFGTTIERDNILFNSMISGYSQNLFGEEALKL 291
Query: 119 FSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
F M +G+ T +S L AC + LQ GR + + K N+FV SALLD+Y+K
Sbjct: 292 FVEMRNNGLNPTDHTLTSILNACGSLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSK 351
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLF-RSMMRQGMKPDCFTLGS 237
CG I++A +F++ K+ V W +MI G A G + LF R + +G PD +
Sbjct: 352 CGSIDEARCVFDQAVEKNTVLWTSMITGYAQSGRGPEGLGLFERLVTEEGFTPDHICFTA 411
Query: 238 ILRA-SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+L A + G I + + GL L+D+Y + G +R A +L ++
Sbjct: 412 VLTACNHAGFLDKGIDYFNQMRRDYGLVPDLDQYACLVDLYVRNGHLRKAKELMEAI 468
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 176/534 (32%), Positives = 282/534 (52%), Gaps = 33/534 (6%)
Query: 81 VLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS-GVRANQFTYSSALR 139
V + F MPER+ VS+ A+I+G++ G ++ ++ A+LR VR + T S+ +
Sbjct: 95 VPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIM 154
Query: 140 ACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVV- 198
+ + G + + + F FV S L+D+YAK G I DA +F+ +E K VV
Sbjct: 155 VASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVM 214
Query: 199 ------------------------------SWNAMIGGLAMQGFNDDSFWLFRSMMRQGM 228
+W M+ GL G ++ +FR M +G+
Sbjct: 215 YNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGV 274
Query: 229 KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQ 288
D +T GSIL A L + QIH I + E + + +L+D+Y+K SIR A
Sbjct: 275 GIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEA 334
Query: 289 LYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
++R M +IIS TA+I G+ ++ S+EA F +M + + DD L +++ CAN+A
Sbjct: 335 VFRRMTCRNIISWTAMIVGYGQNAC-SEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLA 393
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA 408
SL G Q H A V NAL+ +Y K G I DA+R FDEM + +SWT+L+
Sbjct: 394 SLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVT 453
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
GYA+ G E I+L++KM G+ P+ VTF+ +L ACS GL +G + F M + I+
Sbjct: 454 GYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIV 513
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARN 528
P +H++C++DL++R G+ + A I+QM P A W+ +L +C + GN +G+ AA N
Sbjct: 514 PIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAEN 573
Query: 529 LFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
L + +P+ +YV+L +++ A G W R+ M +R ++K PG S+++ K
Sbjct: 574 LLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNK 627
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 191/400 (47%), Gaps = 48/400 (12%)
Query: 49 AHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP---------------- 92
H +H ++ G+ + + + ++ YAK+G + AR+ F M
Sbjct: 165 GHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLR 224
Query: 93 ---------------ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSA 137
+R+ ++WT M++G QNG AL VF M GV +Q+T+ S
Sbjct: 225 CKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSI 284
Query: 138 LRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDV 197
L AC + L+ G+ I I + + +N+FV SAL+D+Y+KC I A +F R+ +++
Sbjct: 285 LTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNI 344
Query: 198 VSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDL 257
+SW AMI G ++++ F M G+KPD FTLGS++ + L + +Q H L
Sbjct: 345 ISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCL 404
Query: 258 IIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKE 317
+ GL ++ +L+ +Y K GSI A++L+ M D +S TAL++G+A+ +KE
Sbjct: 405 ALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQ-FGKAKE 463
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG----- 372
DLF+ M+ + D V +L+ C+ + G Y S G
Sbjct: 464 TIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKG-------CDYFDSMQKDHGIVPID 516
Query: 373 ---NALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIA 408
+ID+Y++SG +A +M + W +L++
Sbjct: 517 DHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLS 556
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 187/389 (48%), Gaps = 41/389 (10%)
Query: 165 NLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMM 224
NLF ++ALL A + D LF + +D VS+NA+I G + G S L+R+++
Sbjct: 78 NLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALL 137
Query: 225 R-QGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
R + ++P TL +++ + + +H +++LG + + L+D+YAK G I
Sbjct: 138 REESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLI 197
Query: 284 RSAYQLYRSMLKTDIISCTALISGFAR------------------------------DDN 313
R A ++++ M ++ LI+G R +
Sbjct: 198 RDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNG 257
Query: 314 HSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN 373
EA D+F+ M + +GID +L C +A+L G+QIHA+ + + VG+
Sbjct: 258 LQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGS 317
Query: 374 ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP 433
AL+DMY+K I A F M +N+ISWT++I GY ++ EA+ + +M+ +G+ P
Sbjct: 318 ALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKP 377
Query: 434 NDVTFLSLLFACSHTGLTCEGWEL----FTDMINKYRILPRAEHFSCVVDLFARRGQLES 489
+D T S++ +C++ EG + + +Y + A +V L+ + G +E
Sbjct: 378 DDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNA-----LVTLYGKCGSIED 432
Query: 490 AYNMIRQMNIKPTASLWSAILGACSIYGN 518
A+ + +M+ S W+A++ + +G
Sbjct: 433 AHRLFDEMSFHDQVS-WTALVTGYAQFGK 460
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 131/267 (49%), Gaps = 1/267 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D T+ S+L C A + IHA+I YE N+ + + ++ Y+K + A
Sbjct: 276 IDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAV 335
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F RM RN++SWTAMI GY QN E A+ FS M G++ + FT S + +CA + L
Sbjct: 336 FRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASL 395
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G + + V +AL+ LY KCG IEDA LF+ + D VSW A++ G
Sbjct: 396 EEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGY 455
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESS 266
A G ++ LF M+ G+KPD T +L A S G+ + G+
Sbjct: 456 AQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPI 515
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ +ID+Y++ G + A + + M
Sbjct: 516 DDHYTCMIDLYSRSGRFKEAEEFIKQM 542
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 150/336 (44%), Gaps = 42/336 (12%)
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
P F L +L A L + ++ D + L + N L +L A + +L
Sbjct: 46 PPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSAL----AHSRLVPDMERL 101
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK-MGIDDVILCLMLNICANVA 348
+ SM + D +S ALI+GF+ + ++ + L++ ++ ++ + + L M+ + + ++
Sbjct: 102 FASMPERDAVSYNALITGFSSTGSPAR-SVQLYRALLREESVRPTRITLSAMIMVASALS 160
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG------------ 396
LG +H + A VG+ L+DMYAK G I DA R F EM
Sbjct: 161 DRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLIT 220
Query: 397 -------------------DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVT 437
D++ I+WT+++ G ++G EA++++++M+ EG+ + T
Sbjct: 221 GLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYT 280
Query: 438 FLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
F S+L AC EG ++ I + S +VD++++ + A + R+M
Sbjct: 281 FGSILTACGALAALEEGKQIHA-YITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRM 339
Query: 498 NIKPTASLWSAILGACSIYGNTSLGELAARNLFDME 533
+ S + I+G YG + E A R +M+
Sbjct: 340 TCRNIISWTAMIVG----YGQNACSEEAVRAFSEMQ 371
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 171/527 (32%), Positives = 291/527 (55%), Gaps = 1/527 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IHA ++ G + + +L KV+ F G+ + + D+ E N+ + MI G N
Sbjct: 29 IHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLNDC 88
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ ++ ++ +M + G+ + FT+ L+ACAR+ + G + + K + FVK +
Sbjct: 89 FQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKIS 148
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L++LY KCG+I++A+ +F+ I K+ SW A I G G ++ +FR ++ G++PD
Sbjct: 149 LINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPD 208
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
F+L +L A +L I + I + G+ + + +L+D Y K G++ A ++
Sbjct: 209 SFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFD 268
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
ML+ +I+S +++I G+A + KEA DLF M+ + + D + +L CA + +L
Sbjct: 269 GMLEKNIVSWSSMIQGYA-SNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALE 327
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
LG + ++ +G ALIDMYAK G + A F M K+ + W + I+G A
Sbjct: 328 LGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLA 387
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
G+ +A+ L+ +M+ G+ P+ TF+ LL AC+H GL EG F M + + P
Sbjct: 388 MSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEI 447
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
EH+ C+VDL R G L+ A+ +I+ M ++ A +W A+LG C ++ +T L E+ + L
Sbjct: 448 EHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIA 507
Query: 532 MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+EP S NYV+LSNIY A+ W+ A K R +M ER ++K PGYS+++
Sbjct: 508 LEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWIE 554
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 157/302 (51%), Gaps = 4/302 (1%)
Query: 10 TGQLKQALKFSLSCPDTLLDPSTY--MSLLQFCIDKKAERQAHLIHAHIITNGYESNLHL 67
G+ ++A+ + L P ++ + +L C R I +I NG N+ +
Sbjct: 187 VGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFV 246
Query: 68 STKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV 127
+T ++ FY K G++ AR FD M E+N+VSW++MI GYA NG + AL +F ML G+
Sbjct: 247 ATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGL 306
Query: 128 RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWI 187
+ + + L +CAR+ L+ G I F++N + +AL+D+YAKCG ++ AW
Sbjct: 307 KPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWE 366
Query: 188 LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV-GGI 246
+F + +KD V WNA I GLAM G D+ LF M + G+KPD T +L A G+
Sbjct: 367 VFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGL 426
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALI 305
+ + L + G ++D+ + G + A+QL +SM ++ + I AL+
Sbjct: 427 VEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALL 486
Query: 306 SG 307
G
Sbjct: 487 GG 488
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 138/288 (47%), Gaps = 6/288 (2%)
Query: 248 LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG 307
L + IH +++LGL+ L ++ +G+ ++++ + +I +I G
Sbjct: 23 LKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRG 82
Query: 308 FARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSY 367
+D +E+ +++ M + + D +L CA V LG ++H+ K
Sbjct: 83 LVLNDCF-QESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEA 141
Query: 368 DAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMK 427
DA V +LI++Y K G I +A + FD++ DKN SWT+ I+GY G EAI++++++
Sbjct: 142 DAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLL 201
Query: 428 HEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQL 487
G+ P+ + + +L AC TG G E + I + ++ + +VD + + G +
Sbjct: 202 EMGLRPDSFSLVEVLSACKRTGDLRSG-EWIDEYITENGMVRNVFVATALVDFYGKCGNM 260
Query: 488 ESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPE 535
E A ++ M K S WS+++ Y + L + A F M E
Sbjct: 261 ERARSVFDGMLEKNIVS-WSSMIQG---YASNGLPKEALDLFFKMLNE 304
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 176/530 (33%), Positives = 297/530 (56%), Gaps = 9/530 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HA + +G+ ++ +++ + Y + ARK FD +P + V W +++G + +
Sbjct: 145 LHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSGS-- 202
Query: 112 DENALLVFSAMLRSG-VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
AL F M +G VR + T +S L A A + GR + +K ++ V +
Sbjct: 203 --EALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVT 260
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
L+ LYAKCG +E A LF+R+E D+V++NA+I G ++ G S LF+ ++ G++P
Sbjct: 261 GLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRP 320
Query: 231 DCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
TL +++ S G E + +H ++K GL+++ ++ +L +Y ++ + SA +
Sbjct: 321 SSSTLVALIPVHSPFGHEPLA-GCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRA 379
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ +M + + S A+ISG+A++ ++ A LF+ M + + + + L+ CA + +
Sbjct: 380 FDAMPEKTMESWNAMISGYAQN-GLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGA 438
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
L+LG+ +H + + V ALIDMY K G IA+A FD M +KNV+SW +I+G
Sbjct: 439 LSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISG 498
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
Y HG G EA++LYK M + P TFLS+L+ACSH GL EG +F M + Y I P
Sbjct: 499 YGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITP 558
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS-LWSAILGACSIYGNTSLGELAARN 528
EH +C+VDL R GQL+ A+ +I + +W A+LGAC ++ + L +LA++
Sbjct: 559 GIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLAKLASQK 618
Query: 529 LFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
LF++EPE + YV+LSN+YT+ + A R+ + R L K PG + ++
Sbjct: 619 LFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIE 668
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 147/269 (54%), Gaps = 1/269 (0%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
ST ++L+ E A +HAH++ G ++N +ST + Y + D+ SAR+AFD
Sbjct: 323 STLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDA 382
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
MPE+ + SW AMISGYAQNG E A+ +F M VR N T SSAL ACA++ L G
Sbjct: 383 MPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLG 442
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ + I + N++V +AL+D+Y KCG I +A +F+ ++ K+VVSWN MI G +
Sbjct: 443 KWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLH 502
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKL 269
G ++ L++ MM + P T S+L A S GG+ + + G+ +
Sbjct: 503 GQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEH 562
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
++D+ + G ++ A++L K+ +
Sbjct: 563 CTCMVDLLGRAGQLKEAFELISEFPKSAV 591
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 180/397 (45%), Gaps = 16/397 (4%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D +T S+L + +HA G + H+ T +I YAK GD+ AR F
Sbjct: 220 DSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLF 279
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
DRM ++V++ A+ISGY+ NG +++ +F ++ G+R + T + + +
Sbjct: 280 DRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEP 339
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
+ + K N V +AL LY + ++ A F+ + K + SWNAMI G A
Sbjct: 340 LAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYA 399
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLESS 266
G + + LF+ M ++P+ T+ S L A +G + L K +H +I LE +
Sbjct: 400 QNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGK--WVHKIIANEKLELN 457
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ +LID+Y K GSI A ++ SM +++S +ISG+ EA L+KDM+
Sbjct: 458 VYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGL-HGQGAEALKLYKDMM 516
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS-YDAAVG----NALIDMYAK 381
+ +L C++ + G + F+ +S Y G ++D+ +
Sbjct: 517 DAHLHPTSSTFLSVLYACSHGGLVKEGTTV----FRSMTSDYGITPGIEHCTCMVDLLGR 572
Query: 382 SGEIADANRAFDEMGDKNVIS--WTSLIAGYAKHGYG 416
+G++ +A E V W +L+ H G
Sbjct: 573 AGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDG 609
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Query: 354 RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKH 413
R +HA A + D V +AL +Y DA + FD + + + W +L+AG +
Sbjct: 143 RPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLS-- 200
Query: 414 GYGHEAIELYKKMKHEGMV-PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAE 472
G EA+E + +M G V P+ T S+L A + T G + + L + E
Sbjct: 201 --GSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHA--FGEKCGLAQHE 256
Query: 473 H-FSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
H + ++ L+A+ G +E A ++ +M P ++A++ SI G
Sbjct: 257 HVVTGLISLYAKCGDMECARHLFDRME-GPDLVTYNALISGYSING 301
>gi|224107543|ref|XP_002314516.1| predicted protein [Populus trichocarpa]
gi|222863556|gb|EEF00687.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 183/563 (32%), Positives = 306/563 (54%), Gaps = 18/563 (3%)
Query: 44 KAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMI 103
K+ + HA I++ G+ N L+TK+I YA G +R FD + ++V W ++I
Sbjct: 41 KSLKLTQQCHARILSLGFTQNPFLATKLISAYAIFGVPALSRLVFDSLHFKSVYLWNSLI 100
Query: 104 SGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFV 163
+G+ +N A F M GV + +T ++ + C + L G++I G K FV
Sbjct: 101 NGFVKNRAYNEAFGWFYQMCCRGVLLDDYTLATMSKVCHEIGDLNAGKLIHGKSLKTGFV 160
Query: 164 ENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG---FNDDSFWLF 220
++ V ++L+ +Y+KCG + LF+ + ++V SWN ++ G A G F+ +
Sbjct: 161 LDVIVANSLMSMYSKCGGFGECLKLFDEMPERNVGSWNVILSGYADSGDRNFDKEVSGFV 220
Query: 221 RSMMRQGMKPDCFTLGSILRASVGGI-ELMKISQIHDLIIKL----GLESSNKLTGSLID 275
+ M +G+KPD FT+ S+L G + + ++H I+++ G + L LID
Sbjct: 221 KDMQIEGLKPDAFTVSSLLTLCNGHMGKRDHGRELHGFIVRIELAVGSGTEVHLGCCLID 280
Query: 276 VYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK-MGIDD 334
+Y++ + +++ M ++ + TA+I+G ++ +E LF +M ++ + +
Sbjct: 281 MYSRSNRVDVGRRVFDRMECRNVYAWTAMINGHVQN-GALEEGLVLFHEMQVRDGVEPNK 339
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE 394
V L +L C+ VA L +QIH +A + Q + D ++ NALIDMY+K G + A + F E
Sbjct: 340 VSLVSVLPACSAVAGLTGVKQIHGYAIRKQFNNDVSLCNALIDMYSKCGSLDHAKQVF-E 398
Query: 395 MGD--KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTC 452
G ++ ISW+S+I+GY HG G EA+ +Y KM G P+ +T + +L ACS GL
Sbjct: 399 FGSFRRDPISWSSMISGYGLHGKGEEAVFVYNKMLQLGNKPDMITIVGVLSACSRAGLVD 458
Query: 453 EGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
EG ++ INKYRI P E +CVVD+ R GQL A + I+ M ++P+ S+W A++ A
Sbjct: 459 EGLCIYKSAINKYRIKPTVEICACVVDMLGRSGQLGQALDYIKTMPMEPSPSVWGAVVSA 518
Query: 513 CSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNP 572
I+GN+ + +LA R L +EPE NYV LSN++ ++ WD + R +M++R L K P
Sbjct: 519 SIIHGNSEMQDLAYRFLVQLEPENPSNYVSLSNLHASSRRWDVVSEVRTMMKDRCLTKTP 578
Query: 573 GYSFLQSSKKNILL-----LEPC 590
G S++ + L PC
Sbjct: 579 GCSWISINNTTHFFYAADKLHPC 601
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 193/408 (47%), Gaps = 13/408 (3%)
Query: 19 FSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKV 78
+ + C LLD T ++ + C + LIH + G+ ++ ++ ++ Y+K
Sbjct: 117 YQMCCRGVLLDDYTLATMSKVCHEIGDLNAGKLIHGKSLKTGFVLDVIVANSLMSMYSKC 176
Query: 79 GDVLSARKAFDRMPERNVVSWTAMISGYAQNG---YDENALLVFSAMLRSGVRANQFTYS 135
G K FD MPERNV SW ++SGYA +G +D+ M G++ + FT S
Sbjct: 177 GGFGECLKLFDEMPERNVGSWNVILSGYADSGDRNFDKEVSGFVKDMQIEGLKPDAFTVS 236
Query: 136 SALRAC-ARMRWLQGGRMIQGSIQKGRFV----ENLFVKSALLDLYAKCGWIEDAWILFE 190
S L C M GR + G I + + + L+D+Y++ ++ +F+
Sbjct: 237 SLLTLCNGHMGKRDHGRELHGFIVRIELAVGSGTEVHLGCCLIDMYSRSNRVDVGRRVFD 296
Query: 191 RIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM-MRQGMKPDCFTLGSILRASVGGIELM 249
R+E ++V +W AMI G G ++ LF M +R G++P+ +L S+L A L
Sbjct: 297 RMECRNVYAWTAMINGHVQNGALEEGLVLFHEMQVRDGVEPNKVSLVSVLPACSAVAGLT 356
Query: 250 KISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR-SMLKTDIISCTALISGF 308
+ QIH I+ + L +LID+Y+K GS+ A Q++ + D IS +++ISG+
Sbjct: 357 GVKQIHGYAIRKQFNNDVSLCNALIDMYSKCGSLDHAKQVFEFGSFRRDPISWSSMISGY 416
Query: 309 ARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAF-KYQSSY 367
+EA ++ M+ D + + +L+ C+ ++ G I+ A KY+
Sbjct: 417 GL-HGKGEEAVFVYNKMLQLGNKPDMITIVGVLSACSRAGLVDEGLCIYKSAINKYRIKP 475
Query: 368 DAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHG 414
+ ++DM +SG++ A M + + W ++++ HG
Sbjct: 476 TVEICACVVDMLGRSGQLGQALDYIKTMPMEPSPSVWGAVVSASIIHG 523
>gi|297824009|ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
gi|297325726|gb|EFH56146.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
Length = 1359
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 177/531 (33%), Positives = 289/531 (54%), Gaps = 3/531 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IH ++ G +++ ++ST ++ Y+K G V A F + ++ + W AM++ Y +N
Sbjct: 793 IHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDN 852
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+AL +F M + V + FT S+ + C+ G+ + + K ++SA
Sbjct: 853 GYSALELFGFMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIESA 912
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ--GMK 229
LL LY+KCG DA+++F+ +E KD+V+W ++I GL G ++ +F M +K
Sbjct: 913 LLTLYSKCGCDTDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLK 972
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
PD + S++ A G L Q+H +IK G + + SLID+Y+K G A ++
Sbjct: 973 PDSDIMTSVINACAGLEALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPEMALKV 1032
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ SM +I++ ++IS ++R+ N + + +LF M+ + + D V + +L ++ AS
Sbjct: 1033 FTSMRPENIVAWNSMISCYSRN-NLPELSIELFNLMLSQGIFPDSVSITSVLVAISSTAS 1091
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
L G+ +H + + D + NALIDMY K G A F +M K++I+W +I G
Sbjct: 1092 LLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYG 1151
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
Y HG A+ L+ ++K G P+DVTFLSL+ AC+H+G EG F M Y I P
Sbjct: 1152 YGSHGDCRTALSLFDELKKAGETPDDVTFLSLISACNHSGFVEEGKNFFEIMKQDYGIEP 1211
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
+ EH++ +VDL R G+LE AY+ I+ M + +S+W +L A + N LG L+A L
Sbjct: 1212 KMEHYANMVDLLGRAGRLEEAYSFIKAMPTEADSSIWLCLLSASRTHHNVELGILSAEKL 1271
Query: 530 FDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSS 580
MEPE+ YV L N+Y AG + A K M+ER L+K PG S+++ S
Sbjct: 1272 LRMEPERGSTYVQLINLYMEAGLKNEAAKLLGEMKERGLQKQPGCSWIEVS 1322
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 135/489 (27%), Positives = 250/489 (51%), Gaps = 22/489 (4%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER-NVVSWTAMISGYAQNG 110
IH +++ N + + L T +I Y K G A + F + ++ NVV W MI G+ +
Sbjct: 691 IHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGGSE 750
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
E++L ++ + V+ +++ AL AC++ GR I + K + +V +
Sbjct: 751 ICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVST 810
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
+LL +Y+KCG + +A +F + K + WNAM+ + LF M ++ + P
Sbjct: 811 SLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSVLP 870
Query: 231 DCFTLGSILR-ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
D FTL +++ S+ G+ S +H + K ++S+ + +L+ +Y+K G AY +
Sbjct: 871 DSFTLSNVISCCSMFGLYDYGKS-VHAELFKRPIQSTPAIESALLTLYSKCGCDTDAYLV 929
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI--LKKMGIDDVILCLMLNICANV 347
++SM + D+++ +LISG ++ KEA +F DM + D I+ ++N CA +
Sbjct: 930 FKSMEEKDMVAWGSLISGLCKNGKF-KEALKVFGDMKDDDDSLKPDSDIMTSVINACAGL 988
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI 407
+L+ G Q+H K + VG++LID+Y+K G A + F M +N+++W S+I
Sbjct: 989 EALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMI 1048
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRI 467
+ Y+++ +IEL+ M +G+ P+ V+ S+L A S T +G L + Y +
Sbjct: 1049 SCYSRNNLPELSIELFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSL-----HGYTL 1103
Query: 468 ---LPRAEHF-SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGE 523
+P H + ++D++ + G + A N+ ++M K + W+ + IYG S G+
Sbjct: 1104 RLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLIT-WNLM-----IYGYGSHGD 1157
Query: 524 L-AARNLFD 531
A +LFD
Sbjct: 1158 CRTALSLFD 1166
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 135/511 (26%), Positives = 242/511 (47%), Gaps = 17/511 (3%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ SLL+ C IH II G+ + ++T ++ Y K G + A + FD
Sbjct: 563 TFPSLLKACSSLTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 622
Query: 92 PE-----RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRA-CARMR 145
+ R+V +MI GY + + + F ML GVR + F+ S + C
Sbjct: 623 SQSGVSARDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGN 682
Query: 146 WL-QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERK-DVVSWNAM 203
+ + G+ I G + + + F+K+AL+D+Y K G DAW +F IE K +VV WN M
Sbjct: 683 FRREDGKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVM 742
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGL 263
I G + S L+ +K + L A QIH ++K+GL
Sbjct: 743 IVGFGGSEICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGL 802
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
++ ++ SL+ +Y+K G + A ++ ++ + A+++ + +DN A +LF
Sbjct: 803 DNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDN-GYSALELFG 861
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
M K + D L +++ C+ + G+ +HA FK A+ +AL+ +Y+K G
Sbjct: 862 FMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCG 921
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMK--HEGMVPNDVTFLSL 441
DA F M +K++++W SLI+G K+G EA++++ MK + + P+ S+
Sbjct: 922 CDTDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSV 981
Query: 442 LFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
+ AC+ G ++ MI ++L S ++DL+++ G E A + M +
Sbjct: 982 INACAGLEALSFGLQVHGSMIKTGQVL-NVFVGSSLIDLYSKCGLPEMALKVFTSMRPEN 1040
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDM 532
+ W++++ S Y +L EL+ LF++
Sbjct: 1041 IVA-WNSMI---SCYSRNNLPELSIE-LFNL 1066
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 142/291 (48%), Gaps = 7/291 (2%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPST--YMSLLQFCIDKKAERQAHLIHAHIITNGYESN 64
K G+ K+ALK + D L P + S++ C +A +H +I G N
Sbjct: 950 KNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTGQVLN 1009
Query: 65 LHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLR 124
+ + + +I Y+K G A K F M N+V+W +MIS Y++N E ++ +F+ ML
Sbjct: 1010 VFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMISCYSRNNLPELSIELFNLMLS 1069
Query: 125 SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIED 184
G+ + + +S L A + L G+ + G + + +K+AL+D+Y KCG+ +
Sbjct: 1070 QGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKY 1129
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS-- 242
A +F++++ K +++WN MI G G + LF + + G PD T S++ A
Sbjct: 1130 AENIFKKMQHKSLITWNLMIYGYGSHGDCRTALSLFDELKKAGETPDDVTFLSLISACNH 1189
Query: 243 VGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
G +E K + + G+E + +++D+ + G + AY ++M
Sbjct: 1190 SGFVEEGK-NFFEIMKQDYGIEPKMEHYANMVDLLGRAGRLEEAYSFIKAM 1239
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 165/379 (43%), Gaps = 45/379 (11%)
Query: 233 FTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRS 292
FT S+L+A L IH II LG + SL+++Y K G + A Q++
Sbjct: 562 FTFPSLLKACSSLTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 621
Query: 293 MLKT-----DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
++ D+ C ++I G+ + KE F+ M++ + D L +++++
Sbjct: 622 WSQSGVSARDVTVCNSMIDGYFKFRRF-KEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKE 680
Query: 348 ASLNL--GRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK-NVISWT 404
+ G+QIH + + D+ + ALIDMY K G DA R F E+ DK NV+ W
Sbjct: 681 GNFRREDGKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWN 740
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI-- 462
+I G+ ++ELY K + +F L ACS + + G ++ D++
Sbjct: 741 VMIVGFGGSEICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKM 800
Query: 463 ----------------NKYRILPRAEH-FSCVVD--------LFARRGQLESAYN----- 492
+K ++ AE FSCVVD + A + ++ Y+
Sbjct: 801 GLDNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELF 860
Query: 493 -MIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYV--VLSNIYTA 549
+RQ ++ P + S ++ CS++G G+ LF P +S + L +Y+
Sbjct: 861 GFMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFK-RPIQSTPAIESALLTLYSK 919
Query: 550 AGAWDNARKTRKLMEERSL 568
G +A K MEE+ +
Sbjct: 920 CGCDTDAYLVFKSMEEKDM 938
>gi|242076494|ref|XP_002448183.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
gi|241939366|gb|EES12511.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
Length = 549
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 170/516 (32%), Positives = 289/516 (56%), Gaps = 30/516 (5%)
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVF-----SAMLRSGVRANQFTYSSALRACARMRW 146
P +SW I A G+ +A+ +F A RS V A + +AL++CA +
Sbjct: 10 PWPPPLSWAHQIRMAAAQGHFRDAISLFLRMRACAAPRSSVPA---SLPAALKSCAALGL 66
Query: 147 LQGGRMIQG-SIQKGRFVENLFVKSALLDLYAK--CGWIEDAWI---------------- 187
G + +I+ G F + F +ALL+LY K C ++ +
Sbjct: 67 SALGASLHALAIRSGAFADR-FTANALLNLYCKLPCSYLHSTGVTSVGGTGSSTALESVR 125
Query: 188 -LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+F+ + +DVVSWN ++ G A +G + ++ L R M R+G +PD FTL S+L
Sbjct: 126 KVFDEMIERDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSFTLSSVLPIFAECA 185
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
++ + S++H ++ G ++ + SLID+YA + +++ ++ D I ++++
Sbjct: 186 DVKRGSEVHGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDPILWNSVLA 245
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
G A++ + +EA +F+ M+ + V ++ +C N+ASL G+Q+HA+ +
Sbjct: 246 GCAQNGS-VEEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVIRGGFE 304
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
+ + ++LIDMY K GEI+ A+ FD M +V+SWT++I GYA HG EA+ L+++M
Sbjct: 305 DNVFISSSLIDMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGPAREALVLFERM 364
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
+ PN +TFL++L ACSH GL +GW+ F M + Y I+P EH + + D+ R G+
Sbjct: 365 ELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSDHYGIVPTLEHCAALADILGRAGE 424
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
L+ AYN I +M IKPTAS+WS +L AC ++ NT L E A+ + ++EP ++VVLSN+
Sbjct: 425 LDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNM 484
Query: 547 YTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
Y+A+G W+ A RK M ++ ++K+P S+++ K
Sbjct: 485 YSASGRWNEAAHLRKSMRKKGMKKDPACSWIEVKNK 520
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 177/350 (50%), Gaps = 11/350 (3%)
Query: 83 SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA 142
S RK FD M ER+VVSW ++ G A+ G AL++ M R G R + FT SS L A
Sbjct: 123 SVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSFTLSSVLPIFA 182
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
++ G + G + F ++FV S+L+D+YA C + + +F+ + +D + WN+
Sbjct: 183 ECADVKRGSEVHGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDPILWNS 242
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
++ G A G +++ +FR M++ G++P T S++ L Q+H +I+ G
Sbjct: 243 VLAGCAQNGSVEEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVIRGG 302
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
E + ++ SLID+Y K G I A+ ++ M D++S TA+I G+A ++EA LF
Sbjct: 303 FEDNVFISSSLIDMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGP-AREALVLF 361
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN-----ALID 377
+ M L + + +L C++ ++ G + FK S + V AL D
Sbjct: 362 ERMELGNAKPNHITFLAVLTACSHAGLVDKGWKY----FKSMSDHYGIVPTLEHCAALAD 417
Query: 378 MYAKSGEIADANRAFDEMGDKNVIS-WTSLIAGYAKHGYGHEAIELYKKM 426
+ ++GE+ +A +M K S W++L+ H A E+ KK+
Sbjct: 418 ILGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKI 467
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 139/271 (51%), Gaps = 5/271 (1%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS 83
PD+ S+ + + C D K + +H + NG+++++ + + +I YA
Sbjct: 169 PDSF-TLSSVLPIFAECADVKRGSE---VHGFAVRNGFDNDVFVGSSLIDMYANCTRTDY 224
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
+ K FD +P R+ + W ++++G AQNG E AL +F ML++GVR T+SS + C
Sbjct: 225 SVKVFDNLPVRDPILWNSVLAGCAQNGSVEEALGIFRRMLQTGVRPVPVTFSSLIPVCGN 284
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
+ L+ G+ + + +G F +N+F+ S+L+D+Y KCG I A +F+R+ DVVSW AM
Sbjct: 285 LASLRFGKQLHAYVIRGGFEDNVFISSSLIDMYCKCGEISIAHHIFDRMCSPDVVSWTAM 344
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLG 262
I G A+ G ++ LF M KP+ T ++L A S G+ + G
Sbjct: 345 IMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSDHYG 404
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ + + +L D+ + G + AY M
Sbjct: 405 IVPTLEHCAALADILGRAGELDEAYNFISKM 435
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 93/177 (52%), Gaps = 2/177 (1%)
Query: 30 PSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFD 89
P T+ SL+ C + + R +HA++I G+E N+ +S+ +I Y K G++ A FD
Sbjct: 272 PVTFSSLIPVCGNLASLRFGKQLHAYVIRGGFEDNVFISSSLIDMYCKCGEISIAHHIFD 331
Query: 90 RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL-Q 148
RM +VVSWTAMI GYA +G AL++F M + N T+ + L AC+ + +
Sbjct: 332 RMCSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDK 391
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS-WNAMI 204
G + + V L +AL D+ + G +++A+ +++ K S W+ ++
Sbjct: 392 GWKYFKSMSDHYGIVPTLEHCAALADILGRAGELDEAYNFISKMQIKPTASVWSTLL 448
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 187/565 (33%), Positives = 300/565 (53%), Gaps = 16/565 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+++ L C D ++ R IH ++ + E + +S ++ Y K G + A++ F
Sbjct: 57 DAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVF 116
Query: 89 DRMPE-RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
+M RNV+SW+ M +A +G AL F ML G++A + + L AC+ +
Sbjct: 117 AKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALV 176
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER--KDVVSWNAMIG 205
Q GRMI I F L V +A++ +Y +CG +E+A +F+ ++ +DVVSWN M+
Sbjct: 177 QDGRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLS 236
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
D+ L++ M ++PD T S+L A ++ +H I+ LE
Sbjct: 237 TYVHNDRGKDAIQLYQRMQ---LRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEK 293
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ + +L+ +YAK GS A ++ M + IIS T +IS + R EA LF+ M
Sbjct: 294 NVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRR-RLVAEACHLFQQM 352
Query: 326 I-LKKMG------IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDM 378
+ L+K G D + +LN CA+V++L G+ + A S D AVG A++++
Sbjct: 353 LELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNL 412
Query: 379 YAKSGEIADANRAFDEMGDK-NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVT 437
Y K GEI +A R FD + + +V W ++IA YA+ G HEA++L+ +M+ EG+ P+ +
Sbjct: 413 YGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFS 472
Query: 438 FLSLLFACSHTGLTCEGWELFTDMINKYRILPRA-EHFSCVVDLFARRGQLESAYNMIRQ 496
F+S+L ACSHTGL +G FT M +YR + R +HF CV DL R G+L+ A + +
Sbjct: 473 FVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEK 532
Query: 497 MNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNA 556
+ +KP A W+++L AC + + + A L +EP + YV LSNIY W
Sbjct: 533 LPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAV 592
Query: 557 RKTRKLMEERSLRKNPGYSFLQSSK 581
K RK M E+ ++K G S ++ K
Sbjct: 593 AKVRKFMAEQGVKKERGVSTIEIGK 617
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/456 (26%), Positives = 231/456 (50%), Gaps = 15/456 (3%)
Query: 74 FYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFT 133
YA A+ AFD + +RN+ SWT +++ +A +G + L M + GVR + T
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 134 YSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE 193
+ +AL +C L+ G I + R + V +ALL++Y KCG + A +F ++E
Sbjct: 61 FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120
Query: 194 R-KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKIS 252
R ++V+SW+ M G A+ G ++ FR M+ G+K + +IL A +
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR 180
Query: 253 QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT--DIISCTALISGFAR 310
IH I G ES + +++ +Y + G++ A +++ +M + D++S ++S +
Sbjct: 181 MIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVH 240
Query: 311 DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA 370
+D K+A L++ M L+ D V +L+ C++ + LGR +H + +
Sbjct: 241 NDR-GKDAIQLYQRMQLRP---DKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVI 296
Query: 371 VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM---- 426
VGNAL+ MYAK G +A FD+M +++ISWT++I+ Y + EA L+++M
Sbjct: 297 VGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELE 356
Query: 427 ---KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFAR 483
+ + P+ + F+++L AC+ +G ++ ++ + + VV+L+ +
Sbjct: 357 KNGSSQRVKPDALAFVTILNACADVSALEQG-KMVSEQAASCGLSSDKAVGTAVVNLYGK 415
Query: 484 RGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNT 519
G++E A + + +P LW+A++ + +G +
Sbjct: 416 CGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQS 451
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 172/534 (32%), Positives = 291/534 (54%), Gaps = 42/534 (7%)
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
A F+ + E N++ W M+ G+A + +AL ++ M+ G N +++ L++CA+
Sbjct: 17 AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAK 76
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE------------- 190
+ + GR I + K + +V ++L+ +YA+ G +EDA +F+
Sbjct: 77 SKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTAL 136
Query: 191 ------------------RIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDC 232
I +DVVSWNAMI G G +++ LF+ MMR ++PD
Sbjct: 137 ITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDE 196
Query: 233 FTLGSILRASV--GGIELMKISQIHDLIIKL----GLESSNKLTGSLIDVYAKYGSIRSA 286
TL S++ A G IEL + Q+H + G SS K+ +LID+Y+K G + +A
Sbjct: 197 GTLVSVVSACAQSGSIELGR--QVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETA 254
Query: 287 YQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICAN 346
+ L+ + D++S LI G+ N KEA LF++M+ +DV L +L CA+
Sbjct: 255 FGLFEGLSCKDVVSWNTLIGGYTHT-NLYKEALLLFQEMLRSGECPNDVTLLSVLPACAH 313
Query: 347 VASLNLGRQIHAFAFKYQS--SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWT 404
+ ++++GR IH + K + + ++ +LIDMYAK G+I A++ F+ M +++ SW
Sbjct: 314 LGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWN 373
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK 464
++I G+A HG + A +L+ +M+ + P+D+TF+ LL ACSH+GL G ++F M
Sbjct: 374 AMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQD 433
Query: 465 YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGEL 524
Y + P+ EH+ C++DL G + A MI M ++P +W ++L AC +GN L E
Sbjct: 434 YNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAES 493
Query: 525 AARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
A+ L +EPE S +YV+LSNIY AG W++ + R ++ + ++K PG S ++
Sbjct: 494 FAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIE 547
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 139/420 (33%), Positives = 210/420 (50%), Gaps = 44/420 (10%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
LL+ C KA + IHA ++ G + ++ T +I YA+ G + ARK FD R+
Sbjct: 70 LLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRD 129
Query: 96 VVSWTAMISGYA-------------------------------QNGYDENALLVFSAMLR 124
VVS TA+I+GYA +NG E AL +F M+R
Sbjct: 130 VVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMR 189
Query: 125 SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGR----FVENLFVKSALLDLYAKCG 180
+ VR ++ T S + ACA+ ++ GR + + F +L + +AL+DLY+KCG
Sbjct: 190 TNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCG 249
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+E A+ LFE + KDVVSWN +IGG ++ LF+ M+R G P+ TL S+L
Sbjct: 250 DVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLP 309
Query: 241 --ASVGGIELMKISQIHDLIIK--LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT 296
A +G I++ + IH I K G+ + L SLID+YAK G I +A+Q++ SML
Sbjct: 310 ACAHLGAIDIGR--WIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYR 367
Query: 297 DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI 356
+ S A+I GFA + AFDLF M ++ DD+ +L+ C++ L+LGRQI
Sbjct: 368 SLSSWNAMIFGFAM-HGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQI 426
Query: 357 -HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHG 414
+ Y + +ID+ SG +A M + + + W SL+ KHG
Sbjct: 427 FKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHG 486
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 146/291 (50%), Gaps = 21/291 (7%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIIT----NGYESNLHLSTKVIIFYAKVGDVLSA 84
D T +S++ C + +H+ + +G+ S+L + +I Y+K GDV +A
Sbjct: 195 DEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETA 254
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
F+ + ++VVSW +I GY + ALL+F MLRSG N T S L ACA +
Sbjct: 255 FGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHL 314
Query: 145 RWLQGGRMIQGSIQKG-RFVEN-LFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
+ GR I I K + V N ++++L+D+YAKCG IE A +F + + + SWNA
Sbjct: 315 GAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNA 374
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-------SVGGIELMKISQIH 255
MI G AM G + +F LF M ++PD T +L A +G ++Q +
Sbjct: 375 MIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDY 434
Query: 256 DLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTD-IISCTAL 304
+L KL + G +ID+ G + A ++ +M ++ D +I C+ L
Sbjct: 435 NLTPKL------EHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLL 479
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 169/487 (34%), Positives = 269/487 (55%), Gaps = 9/487 (1%)
Query: 97 VSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGS 156
W + A+ AL ++ MLR G R N FT+ AL++CA + G G
Sbjct: 15 TPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQ 74
Query: 157 IQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER--IERKDVVSWNAMIGGLAMQGFND 214
I K V FV++ L+ +Y K +++A +FE RK V +NA++ G
Sbjct: 75 ITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCS 134
Query: 215 DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLI 274
++ LFR M +G+ + TL ++ A V I L S +H +K G +S + I
Sbjct: 135 EAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFI 194
Query: 275 DVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD 334
+Y K GS+ A +L+ M +IS A++SG+A++ + +L+++M + + D
Sbjct: 195 TMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQN-GLATNVLELYRNMDMNGVHPDP 253
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQSS---YDAAVGNALIDMYAKSGEIADANRA 391
V L +L+ CAN+ + ++G H FK Q+S + + NALI+MYA+ G + A
Sbjct: 254 VTLVGVLSSCANLGAQSVG---HEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAV 310
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLT 451
FD M ++ ++SWT++I GY HG+G A++L+K+M G+ P+ F+ +L ACSH GLT
Sbjct: 311 FDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLT 370
Query: 452 CEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
+G E F M Y++ P EH+SC+VDL R G+L+ A +I M IKP ++W A+LG
Sbjct: 371 DQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLG 430
Query: 512 ACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKN 571
AC I+ N L ELA + ++EPE YV+LSNIY+ A + R +M+E+ L+K+
Sbjct: 431 ACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKD 490
Query: 572 PGYSFLQ 578
PG S+++
Sbjct: 491 PGCSYVE 497
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 135/268 (50%), Gaps = 2/268 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T + L+ C+ +H + G++S++ + I Y K G V A+K FD M
Sbjct: 154 TLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEM 213
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P + ++SW AM+SGYAQNG N L ++ M +GV + T L +CA + G
Sbjct: 214 PVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGH 273
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
++ IQ F N F+ +AL+++YA+CG + A +F+ + + +VSW A+IGG M G
Sbjct: 274 EVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHG 333
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLT 270
+ + LF+ M+R G++PD +L A S G+ + + LE +
Sbjct: 334 HGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHY 393
Query: 271 GSLIDVYAKYGSIRSAYQLYRSM-LKTD 297
++D+ + G ++ A L SM +K D
Sbjct: 394 SCMVDLLGRAGRLKEAQTLIESMPIKPD 421
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 168/368 (45%), Gaps = 11/368 (2%)
Query: 53 HAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR--MPERNVVSWTAMISGYAQNG 110
H I G + T +I Y K V +ARK F+ + V + A++SGY N
Sbjct: 72 HGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNS 131
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
A+L+F M GV N T + AC L+ G + S K F ++ V +
Sbjct: 132 KCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVN 191
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
+ +Y KCG + A LF+ + K ++SWNAM+ G A G + L+R+M G+ P
Sbjct: 192 CFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHP 251
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKL---GLESSNKLTGSLIDVYAKYGSIRSAY 287
D TL +L + L S H++ K+ G S+ L +LI++YA+ G++ A
Sbjct: 252 DPVTLVGVLSSCA---NLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQ 308
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
++ M + ++S TA+I G+ H + A LFK+MI + D +L+ C++
Sbjct: 309 AVFDGMPERTLVSWTAIIGGYGM-HGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHA 367
Query: 348 ASLNLGRQIHAFAFK-YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK-NVISWTS 405
+ G + + YQ + ++D+ ++G + +A + M K + W +
Sbjct: 368 GLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGA 427
Query: 406 LIAGYAKH 413
L+ H
Sbjct: 428 LLGACKIH 435
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 97/187 (51%), Gaps = 8/187 (4%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
DP T + +L C + A+ H + I +G+ SN L+ +I YA+ G++ A+ F
Sbjct: 252 DPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVF 311
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D MPER +VSWTA+I GY +G+ E A+ +F M+RSG+ + + L AC+
Sbjct: 312 DGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTD 371
Query: 149 GG----RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAM 203
G +M++ + Q E+ S ++DL + G +++A L E + + D W A+
Sbjct: 372 QGLEYFKMMKRNYQLEPGPEHY---SCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGAL 428
Query: 204 IGGLAMQ 210
+G +
Sbjct: 429 LGACKIH 435
>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
Length = 617
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 188/500 (37%), Positives = 292/500 (58%), Gaps = 13/500 (2%)
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
MP RN VSWT ++SG +QN +AL F+AM R+GV +F SSA RA A + G
Sbjct: 1 MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 60
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ + F LFV S L D+Y+KCG + +A +F+++ +KD V+W AMI G A
Sbjct: 61 AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKN 120
Query: 211 GFNDDSFWLFRSMMRQGM-KPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNK 268
G + + FR M R+G+ D S+L AS GG++ +S+ IH + K G E
Sbjct: 121 GSLEAAVLSFRDMKREGLVGADQHVFCSVLSAS-GGLKDGWLSKSIHCCVTKAGFELEVA 179
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTD-----IISCTALISGFARDDNHSKEAFDLFK 323
+ +LID+YAK + SA ++ LK D ++S T++I G+ D +EA ++
Sbjct: 180 VRNALIDMYAKSMDVESASRV----LKIDPGGWNVVSGTSMIDGYIETDC-VEEALVIYV 234
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
++ + + ++ M+ CA A L G Q+HA K D+ VG+ L+DMY K G
Sbjct: 235 ELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCG 294
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
I+ + + F+E+ + I+W ++I +A+HG+G EAI+ + +M + G+ PN + F+SLL
Sbjct: 295 LISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLT 354
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
ACSH GL EG + F M + I P+ EH+SC++D + R G+L+ AY I +M IKP A
Sbjct: 355 ACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNA 414
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
W ++LGAC + G+ LGE+AA+NL +EP + +V LS IY + G W++ + RKLM
Sbjct: 415 YGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLM 474
Query: 564 EERSLRKNPGYSFLQSSKKN 583
+ ++K PG+S++ S+KK
Sbjct: 475 RDSRIKKLPGFSWVDSNKKT 494
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 189/380 (49%), Gaps = 31/380 (8%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H + G+++ L +++ + Y+K G + A + FD+MP+++ V+WTAMI GYA+NG
Sbjct: 63 LHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGS 122
Query: 112 DENALLVFSAMLRSG-VRANQFTYSSALRACARMR--WLQGGRMIQGSIQKGRFVENLFV 168
E A+L F M R G V A+Q + S L A ++ WL + I + K F + V
Sbjct: 123 LEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLS--KSIHCCVTKAGFELEVAV 180
Query: 169 KSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF-----NDDSFWLFRSM 223
++AL+D+YAK +E A R+ + D WN + G + G+ +++ ++ +
Sbjct: 181 RNALIDMYAKSMDVESA----SRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVEL 236
Query: 224 MRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
RQG++P+ FT S+++ L + +Q+H +IK L + + +L+D+Y K G I
Sbjct: 237 RRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLI 296
Query: 284 RSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNI 343
+ QL+ + I+ A+I+ FA+ H +EA F MI + + + +L
Sbjct: 297 SLSMQLFNEIEYRTDIAWNAVINVFAQ-HGHGREAIQAFDRMIYSGIRPNHIAFVSLLTA 355
Query: 344 CANVASLNLGRQIHAFAFKYQSSYDAAVG--------NALIDMYAKSGEIADANRAFDEM 395
C++ ++ G KY S A G + +ID Y ++G + +A + EM
Sbjct: 356 CSHAGLVDEG-------LKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEM 408
Query: 396 GDK-NVISWTSLIAGYAKHG 414
K N W SL+ G
Sbjct: 409 PIKPNAYGWCSLLGACRMRG 428
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 104/214 (48%), Gaps = 4/214 (1%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITN 59
+++ +T +++AL + ++P+ T+ S+++ C + Q +HA +I
Sbjct: 215 SMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKT 274
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
+ + + ++ Y K G + + + F+ + R ++W A+I+ +AQ+G+ A+ F
Sbjct: 275 DLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAF 334
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK-SALLDLYAK 178
M+ SG+R N + S L AC+ + G S+++ +E S ++D Y +
Sbjct: 335 DRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGR 394
Query: 179 CGWIEDAWILFERIE-RKDVVSWNAMIGGLAMQG 211
G +++A+ + + + W +++G M+G
Sbjct: 395 AGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRG 428
>gi|297734798|emb|CBI17032.3| unnamed protein product [Vitis vinifera]
Length = 694
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 172/533 (32%), Positives = 300/533 (56%), Gaps = 14/533 (2%)
Query: 52 IHAHIITNGYES--NLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQN 109
+H H++ + S NL L+ V+ YAK G + A + FD M ERN+VSWTA++S YAQ+
Sbjct: 75 LHCHMLLHNPNSDFNLFLTNHVVNMYAKCGLLDYAHQWFDEMLERNIVSWTALVSRYAQH 134
Query: 110 GYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK 169
G+ + VF+ ML R +F ++S + GR + K F ++V
Sbjct: 135 GWPDECFRVFTDMLICH-RPTEFAFASVISTSGGDG--DCGRQVHALAVKTSFDSCVYVG 191
Query: 170 SALLDLYAK-CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGM 228
+ L+ +Y + CG ++AW ++E + +++VSWN MI G + G + + +F M G+
Sbjct: 192 NVLIMMYCRSCGGTDEAWNVYEAMGFRNLVSWNFMITGFQVCGCGNRALEIFSQMHFGGI 251
Query: 229 KPDCFTLGSILRASVG-GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYG-SIRSA 286
+ D TL +I G G L Q+ L K G S ++ L+ Y+ G +
Sbjct: 252 RFDRATLVNIFSCLCGMGDGLECCFQLQCLTTKTGFISEIEVPTGLVKAYSSLGGEVNDC 311
Query: 287 YQLYRSM-LKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
Y+++ + + D++S T +I+ FA D +EAF LF+ + + + D + ++L CA
Sbjct: 312 YRIFLELDGRQDVVSWTGIIAVFAERD--PEEAFLLFRQFLRECLAPDRHMFSIVLKACA 369
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
+A+ + + K D + NALI A+ G +A + +AFD++G ++ +SW S
Sbjct: 370 GLATEGHALTVQSHVLKVGFEDDIVLTNALIHTCARCGSVALSKQAFDKIGSRDTVSWNS 429
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
++ YA HG G EA++L+ +M + P+ TF++L+ ACSH G+ EG ++F M N +
Sbjct: 430 MLKAYAMHGQGKEALQLFSQMDAQ---PDGATFVALISACSHAGMVEEGAKIFEAMSNNH 486
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
I+P+ +H++C+VD+ R G++ A +I +M ++P + +WSA+LG C +G T +LA
Sbjct: 487 GIVPQLDHYACMVDILGRAGRIYEAKELIDKMPMEPDSMVWSALLGGCRKHGETKFAKLA 546
Query: 526 ARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
A L +++P S+ Y+++SNI++ G ++ AR R+ ME +++RK PG S++Q
Sbjct: 547 AVKLKELDPNNSLGYILMSNIFSTNGHFNEARLIRREMERKTVRKEPGLSWIQ 599
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 112/220 (50%), Gaps = 10/220 (4%)
Query: 28 LDPSTYMS--LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
L P +M +L+ C E A + +H++ G+E ++ L+ +I A+ G V ++
Sbjct: 354 LAPDRHMFSIVLKACAGLATEGHALTVQSHVLKVGFEDDIVLTNALIHTCARCGSVALSK 413
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
+AFD++ R+ VSW +M+ YA +G + AL +FS M + + T+ + + AC+
Sbjct: 414 QAFDKIGSRDTVSWNSMLKAYAMHGQGKEALQLFSQM---DAQPDGATFVALISACSHAG 470
Query: 146 WL-QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAM 203
+ +G ++ + V L + ++D+ + G I +A L +++ D + W+A+
Sbjct: 471 MVEEGAKIFEAMSNNHGIVPQLDHYACMVDILGRAGRIYEAKELIDKMPMEPDSMVWSAL 530
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV 243
+GG G + F ++ + + P+ +LG IL +++
Sbjct: 531 LGGCRKHG--ETKFAKLAAVKLKELDPN-NSLGYILMSNI 567
>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
Length = 1974
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 201/632 (31%), Positives = 313/632 (49%), Gaps = 81/632 (12%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS 83
PD + P+ +L+ C + +H +++ G+ + + +S+ ++ Y K G +
Sbjct: 1275 PDNFVLPN----VLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLED 1330
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
ARK FD M E+NVV+W +MI GY QNG ++ A+ VF M G+ + T +S L A A
Sbjct: 1331 ARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASAN 1390
Query: 144 MRWLQGGRMIQG---SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSW 200
+ L G+ QG +I ++N+ + S++++ Y+K G IEDA ++F R+ KDVV+W
Sbjct: 1391 LDALIEGK--QGHAIAILNSLDLDNI-LGSSIINFYSKVGLIEDAELVFSRMLEKDVVTW 1447
Query: 201 NAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIK 260
N +I + + M + ++ D TL SIL AS + + H I+
Sbjct: 1448 NLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIR 1507
Query: 261 LGLESSNKLTGSLIDV-------------------------------YAKYG----SIRS 285
LES + S+ID+ YA+ G +++
Sbjct: 1508 RNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKL 1567
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM-------------------- 325
YQ+ + ++IS ++I GF R+ EA D+F M
Sbjct: 1568 FYQMQFDSVPPNVISWNSVILGFLRN-GQVNEAKDMFSQMQSLGFQPNLITWTTLISGLA 1626
Query: 326 ----------ILKKM---GIDDVILCL--MLNICANVASLNLGRQIHAFAFKYQSSYDAA 370
+KM GI I + +L C ++ SL GR IH F +++
Sbjct: 1627 QSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVP 1686
Query: 371 VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG 430
V +L+DMYAK G I +A + F M K + + ++I+ YA HG EA+ L+K ++ EG
Sbjct: 1687 VATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEG 1746
Query: 431 MVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA 490
+ P+ +TF S+L ACSH GL EG LF DM++K+ + P EH+ CVV L +R G L+ A
Sbjct: 1747 IEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEA 1806
Query: 491 YNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAA 550
+I M +P A + ++L AC + LGE +++LF +EP S NYV LSN Y AA
Sbjct: 1807 LRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAA 1866
Query: 551 GAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
G W R LM+ R LRKNPG S++Q+ K
Sbjct: 1867 GRWVEVSNMRDLMKVRGLRKNPGCSWIQTGGK 1898
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 164/571 (28%), Positives = 298/571 (52%), Gaps = 16/571 (2%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG--YESN 64
K G L++++ + D + P Y LLQ C+ ++A IHA I+ NG + N
Sbjct: 1151 KDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGDFFAKN 1210
Query: 65 LHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLR 124
++ TK+++FYAK A + F R+ RNV SW A++ + G+ E+ALL F M
Sbjct: 1211 EYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQE 1270
Query: 125 SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIED 184
+GV + F + L+AC ++ + G+ + G + K F +FV S+L+D+Y KCG +ED
Sbjct: 1271 NGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLED 1330
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG 244
A +F+ + K+VV+WN+MI G G N ++ +F M +G++P T+ S L AS
Sbjct: 1331 ARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASAN 1390
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
L++ Q H + I L+ N L S+I+ Y+K G I A ++ ML+ D+++ L
Sbjct: 1391 LDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLL 1450
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
IS + + K A ++ M + + D V L +L+ A +++ LG++ H + +
Sbjct: 1451 ISSYVQHHQVGK-ALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRN 1509
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
D V N++IDMYAK I DA + FD +++++ W +L+A YA+ G EA++L+
Sbjct: 1510 LESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFY 1569
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
+M+ + + PN +++ S++ G E ++F+ M P ++ ++ A+
Sbjct: 1570 QMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQM-QSLGFQPNLITWTTLISGLAQS 1628
Query: 485 GQLESA---YNMIRQMNIKPTASLWSAILGAC----SIYGNTSLGELAARNLFDMEPEKS 537
G A + +++ I+P+ + +++L AC S++ ++ R+ F + +
Sbjct: 1629 GFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVA 1688
Query: 538 VNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+ V ++Y G+ D A+K +M + L
Sbjct: 1689 TSLV---DMYAKCGSIDEAKKVFHMMSSKEL 1716
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 185/587 (31%), Positives = 309/587 (52%), Gaps = 20/587 (3%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYE 62
I + +TG+ AL P + + ++ L C A R+ + + ++
Sbjct: 19 IAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARR-------VFDHTHD 71
Query: 63 SNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAM 122
N+ +I YAK V A + FD MP+ + VS+ +I+ YA+ G + A +F M
Sbjct: 72 CNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEM 131
Query: 123 LRSGVRANQFTYSSALRACA----RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
+ + + FT S + AC +R L ++ G + V +AL+ Y+K
Sbjct: 132 REAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTG------LDSYVSVGNALITSYSK 185
Query: 179 CGWIEDAWILFERI-ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGS 237
G++++A +F + E +D VSWN+M+ + L+ M +G+ D FTL S
Sbjct: 186 NGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLAS 245
Query: 238 ILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGS-IRSAYQLYRSMLKT 296
+L A +L+ Q H +IK G ++ + LID+Y+K G + +++ +
Sbjct: 246 VLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNP 305
Query: 297 DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI 356
D++ +ISG++ ++ S EA + F+ + + DD L +++ C+N++S + GRQ+
Sbjct: 306 DLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQV 365
Query: 357 HAFAFKYQ-SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGY 415
H A K S +V NALI MY+K G + DA FD M + N +S+ S+IAGYA+HG
Sbjct: 366 HGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGM 425
Query: 416 GHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFS 475
G +++ L+++M G P ++TF+S+L AC+HTG +G F M K+ I P A HFS
Sbjct: 426 GFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFS 485
Query: 476 CVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPE 535
C++DL R G+L A +I + P WSA+LGAC I+GN L AA L ++P
Sbjct: 486 CMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPL 545
Query: 536 KSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+ YV+L+NIY+ G +A RKLM +R ++K PG S+++ +++
Sbjct: 546 NAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRR 592
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 341 LNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNV 400
L C L G+ +HA K + N + +Y+K ++ A R FD D NV
Sbjct: 15 LKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNV 74
Query: 401 ISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTD 460
S+ +LI+ YAK Y A +L+ +M P+ V++ +L+ A + G T ++LF +
Sbjct: 75 FSFNTLISAYAKESYVEVAHQLFDEMPQ----PDSVSYNTLIAAYARRGDTQPAFQLFLE 130
Query: 461 M 461
M
Sbjct: 131 M 131
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 168/561 (29%), Positives = 297/561 (52%), Gaps = 2/561 (0%)
Query: 19 FSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKV 78
+ + D + TY+++L C ++ + IH I+ G+E ++ + T +I Y K
Sbjct: 95 YQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKC 154
Query: 79 GDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSAL 138
G V A +F R+ R+VVSWTAMI+ Q+ A ++ M GV N+ T +
Sbjct: 155 GSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVF 214
Query: 139 RACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVV 198
A +L G+ I + ++ V ++ ++++ G + DA LFE + +DVV
Sbjct: 215 NAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVV 274
Query: 199 SWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLI 258
+WN +I ++ LF + + G+K + T +L L K IH+L+
Sbjct: 275 TWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELV 334
Query: 259 IKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEA 318
+ G + + +L+ +Y + + A++++ M D+I+ T + +A++ KEA
Sbjct: 335 KEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQN-GFRKEA 393
Query: 319 FDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDM 378
LF++M L+ L +L+ CA++A+L GRQIH+ + + V ALI+M
Sbjct: 394 LQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINM 453
Query: 379 YAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTF 438
Y K G++A+A F++M ++++ W S++ YA+HGY E ++L+ +M+ +G + V+F
Sbjct: 454 YGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSF 513
Query: 439 LSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMN 498
+S+L A SH+G +G++ F M+ + I P E + CVVDL R G+++ A +++ +++
Sbjct: 514 VSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLS 573
Query: 499 -IKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNAR 557
P LW +LGAC + T + AA + + +P S YVVLSN+Y AAG WD
Sbjct: 574 GCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVN 633
Query: 558 KTRKLMEERSLRKNPGYSFLQ 578
+ RKLM R ++K PG S ++
Sbjct: 634 RMRKLMRSRGVKKEPGRSSIE 654
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 154/548 (28%), Positives = 286/548 (52%), Gaps = 9/548 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D + +++LLQ C K +H H+ G+E N + +I YA+ G V A++ F
Sbjct: 4 DTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVF 63
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ + ++V +WT MI Y Q G + AL +F M V + TY + L ACA L+
Sbjct: 64 EILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLK 123
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G I G I + F ++FV +AL+++Y KCG + AW F+R+E +DVVSW AMI
Sbjct: 124 DGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACV 183
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
+ WL+R M G+ P+ TL ++ A L + I+ L+ +ES +
Sbjct: 184 QHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVR 243
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ S ++++ G + A +L+ M+ D+++ +I+ + +++N EA LF +
Sbjct: 244 VMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFG-EAVRLFGRLQQD 302
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ +D+ LMLN+ ++ SL G+ IH + D V AL+ +Y + A
Sbjct: 303 GIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQA 362
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ F +MG K+VI+WT + YA++G+ EA++L+++M+ EG P T +++L C+H
Sbjct: 363 WKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHL 422
Query: 449 GLTCEGWELFTDMI-NKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
+G ++ + +I N +R+ E + +++++ + G++ A ++ +M K +W+
Sbjct: 423 AALQKGRQIHSHIIENGFRMEMVVE--TALINMYGKCGKMAEARSVFEKM-AKRDILVWN 479
Query: 508 AILGACSIYG--NTSLGELAARNLFDMEPEKSVNYV-VLSNIYTAAGAWDNARKTRKLME 564
++LGA + +G + +L +L + D E +V++V VLS + + D + +++
Sbjct: 480 SMLGAYAQHGYYDETL-QLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQ 538
Query: 565 ERSLRKNP 572
+ S+ P
Sbjct: 539 DFSITPTP 546
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 162/341 (47%), Gaps = 10/341 (2%)
Query: 229 KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQ 288
KPD ++L+ + ++H + G E +N + G LI +YA+ GS+ A Q
Sbjct: 2 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 61
Query: 289 LYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
++ + + D+ + T +I + + ++ + A +F M + + V +LN CA+
Sbjct: 62 VFEILERKDVFAWTRMIGIYCQQGDYDR-ALGMFYQMQEEDVMPTKVTYVAILNACASTE 120
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA 408
SL G +IH + D VG ALI+MY K G + A +F + ++V+SWT++IA
Sbjct: 121 SLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA 180
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
+H A LY++M+ +G+VPN +T ++ A EG +++ +++ +
Sbjct: 181 ACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYS-LVSSRVME 239
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIY-GNTSLGE---L 524
+ +++F G L A + M + + W+ ++ + Y N + GE L
Sbjct: 240 SDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVT-WNIVI---TFYVQNENFGEAVRL 295
Query: 525 AARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
R D + +V++ N+YT+ + + +L++E
Sbjct: 296 FGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKE 336
>gi|357508205|ref|XP_003624391.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499406|gb|AES80609.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 709
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 177/527 (33%), Positives = 278/527 (52%), Gaps = 11/527 (2%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IHA+ I L L ++ Y K D+ SA + FD MPERNVVSW+++++G NG
Sbjct: 27 IHAYFIKGHIPFTLFLQNHLLNMYIKCKDLTSALQLFDEMPERNVVSWSSVMTGCVHNGG 86
Query: 112 DENALLVFSAMLRSG-VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
+AL +FS M R G V+ N+FT+ SAL+AC+ + I + + N+F+ +
Sbjct: 87 ASDALSLFSCMHREGFVKPNEFTFVSALQACSLSENVTQAYQIYSLVVRSGLECNVFLLN 146
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG-LAMQGFNDDSFWLFRSMMRQGMK 229
A L + G + +A +FE +D V+WN M+GG L FW R M R+G+K
Sbjct: 147 AFLTALVRNGKLTEALQIFETSPIRDTVTWNTMMGGYLEFSSEQIPVFW--RYMNREGVK 204
Query: 230 PDCFTLGSILRASVGGIELMKIS-QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQ 288
PD FT S L + I +K+ Q+H +++ G + SL+D+Y K + ++
Sbjct: 205 PDEFTFASAL-TGLATISSLKMGMQVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFK 263
Query: 289 LYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI--DDVILCLMLNICAN 346
+ + D+ S T + G + + A + M KKMG+ + L LN CA
Sbjct: 264 AFDEIPHKDVCSWTQMADGCLQW-GEPRMALAVIAKM--KKMGVKPNKFTLATALNACAC 320
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
+AS+ G+Q H K S D V NAL+DMYAK G + A F ++V+SWT++
Sbjct: 321 LASMEEGKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAWTVFRSTNSRSVVSWTTM 380
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYR 466
I A++G EA++++ +MK + PN +TF+ +L+ACS G EGW+ + M Y
Sbjct: 381 IMACAQNGQPGEALQIFDEMKETSVEPNYITFICVLYACSQGGFVDEGWKYLSSMDKDYG 440
Query: 467 ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAA 526
I+P +H+ C+V + R G ++ A +I +M P +W +L AC I+G+ G+LAA
Sbjct: 441 IIPGEDHYICMVSILGRAGLIKEAKELILRMPFHPGVRVWQTLLSACQIHGDVETGKLAA 500
Query: 527 RNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPG 573
+ + +YV+LSN+ WD R+LME R+++K PG
Sbjct: 501 EHAIKHDKNDPSSYVLLSNMLAETSNWDCVVSLRELMETRNVKKVPG 547
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 200/425 (47%), Gaps = 23/425 (5%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T++S LQ C + QA+ I++ ++ +G E N+ L + + G + A + F+
Sbjct: 109 TFVSALQACSLSENVTQAYQIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETS 168
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P R+ V+W M+ GY + E + + M R GV+ ++FT++SAL A + L+ G
Sbjct: 169 PIRDTVTWNTMMGGYLEFS-SEQIPVFWRYMNREGVKPDEFTFASALTGLATISSLKMGM 227
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ + + + +++ V ++L+D+Y K +E+ + F+ I KDV SW M G G
Sbjct: 228 QVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWG 287
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
+ + M + G+KP+ FTL + L A + + Q H L IKLG + +
Sbjct: 288 EPRMALAVIAKMKKMGVKPNKFTLATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDN 347
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
+L+D+YAK G + SA+ ++RS ++S T +I A+ + EA +F +M +
Sbjct: 348 ALLDMYAKCGCMDSAWTVFRSTNSRSVVSWTTMIMACAQ-NGQPGEALQIFDEMKETSVE 406
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG--------NALIDMYAKSG 383
+ + +L C+ ++ G +KY SS D G ++ + ++G
Sbjct: 407 PNYITFICVLYACSQGGFVDEG-------WKYLSSMDKDYGIIPGEDHYICMVSILGRAG 459
Query: 384 EIADANRAFDEMG-DKNVISWTSLIAGYAKHG---YGHEAIELYKKMKHEGMVPNDVTFL 439
I +A M V W +L++ HG G A E +KH+ P+ L
Sbjct: 460 LIKEAKELILRMPFHPGVRVWQTLLSACQIHGDVETGKLAAE--HAIKHDKNDPSSYVLL 517
Query: 440 SLLFA 444
S + A
Sbjct: 518 SNMLA 522
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 183/547 (33%), Positives = 302/547 (55%), Gaps = 11/547 (2%)
Query: 34 MSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPE 93
+SL++ C K +Q IHA ++ N L +K+I + D+ A F+++ +
Sbjct: 37 LSLIKQCKSKNLLKQ---IHAQMLINSIPKPNFLLSKII----DLKDLAYASLVFNQLTK 89
Query: 94 RNVVSWTAMISGYAQNGYDENALLVFSAMLRS-GVRANQFTYSSALRACARMRWLQGGRM 152
N+ ++ M+ G A + + L+S G++AN FTY AC +R L G++
Sbjct: 90 PNIYAFNVMLRGLATTWKKYDFCVELYYKLKSLGLKANNFTYPFLFIACGNVRGLVHGKI 149
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF 212
+ K + +V +L+ +YA+CG + A +F+ + +D+VSWN+MI G + GF
Sbjct: 150 GHCLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSKMGF 209
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS 272
++ LF M +G +PD TL S+L A +L + +++ +E ++ + +
Sbjct: 210 TKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSA 269
Query: 273 LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI 332
LID+Y K G + SA +++ SM D+++ A+I+G+A++ S EA LF M
Sbjct: 270 LIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQN-GASNEAIVLFNGMREAGPHP 328
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAF 392
D V + +L+ C+ + +L+LG+ + A + +D V +ALIDMYAK G + DA R F
Sbjct: 329 DRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVF 388
Query: 393 DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM-KHEGMV-PNDVTFLSLLFACSHTGL 450
+ M KN +SW ++I+ A HG EA+ L+++M K G V PND+TF+ +L AC H GL
Sbjct: 389 ESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGL 448
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
EG +LF M + ++P+ EH+SC+VDL AR G L A+++I++M KP + ++L
Sbjct: 449 VDEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPDEIVLGSLL 508
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
GAC N +GE + +ME S NYV+ S IY WD++ K R LM + + K
Sbjct: 509 GACQRRRNADVGERVIQLFLEMELSNSGNYVISSKIYANMRRWDDSAKMRVLMRQCGVSK 568
Query: 571 NPGYSFL 577
PG S++
Sbjct: 569 TPGCSWI 575
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 210/405 (51%), Gaps = 12/405 (2%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
TY L C + + + H + G + + +++ +I YA+ G++ ARK FD M
Sbjct: 130 TYPFLFIACGNVRGLVHGKIGHCLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEM 189
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
+R++VSW +MISGY++ G+ + A+ +F M G ++ T S L AC + L GR
Sbjct: 190 GDRDLVSWNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGR 249
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
++G + + + N ++ SAL+D+Y KCG + A +F+ + KDVV+WNA+I G A G
Sbjct: 250 WVEGFVLEKKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNG 309
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGLESSNKL 269
++++ LF M G PD T+ +L A ++G ++L K + H + GL+ +
Sbjct: 310 ASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWVETH--ASEKGLQHDVYV 367
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+LID+YAK GS+ A +++ SM + +S A+IS A ++EA LF+ M
Sbjct: 368 ASALIDMYAKCGSLDDAVRVFESMPHKNEVSWNAMISALAF-HGQAQEALSLFRRMSKDN 426
Query: 330 MGI--DDVILCLMLNICANVASLNLGRQI-HAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ +D+ +L+ C + ++ GRQ+ + + + ++D+ A++G +
Sbjct: 427 GTVQPNDITFIGVLSACVHAGLVDEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLY 486
Query: 387 DANRAFDEM-GDKNVISWTSLIAGYAKH---GYGHEAIELYKKMK 427
+A +M G + I SL+ + G I+L+ +M+
Sbjct: 487 EAWDLIKKMPGKPDEIVLGSLLGACQRRRNADVGERVIQLFLEME 531
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 169/331 (51%), Gaps = 8/331 (2%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K G K+A+ + + +P T +S+L C D + ++ E N +
Sbjct: 206 KMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSY 265
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ + +I Y K GD++SAR+ FD MP ++VV+W A+I+GYAQNG A+++F+ M +G
Sbjct: 266 MGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAG 325
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
++ T L AC+ + L G+ ++ + +++V SAL+D+YAKCG ++DA
Sbjct: 326 PHPDRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAV 385
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG--MKPDCFTLGSILRASVG 244
+FE + K+ VSWNAMI LA G ++ LFR M + ++P+ T +L A V
Sbjct: 386 RVFESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVH 445
Query: 245 GIELMKISQIHD-LIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML-KTDIISCT 302
+ + Q+ + + + GL + ++D+ A+ G + A+ L + M K D I
Sbjct: 446 AGLVDEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPDEIVLG 505
Query: 303 ALISGFARDDNH--SKEAFDLFKDMILKKMG 331
+L+ R N + LF +M L G
Sbjct: 506 SLLGACQRRRNADVGERVIQLFLEMELSNSG 536
>gi|297796913|ref|XP_002866341.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312176|gb|EFH42600.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 178/562 (31%), Positives = 309/562 (54%), Gaps = 36/562 (6%)
Query: 20 SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVG 79
++ C LL +Y+ L++ + ++HAH++T+G ++ K++ FY + G
Sbjct: 6 TIPCSVRLLSIGSYVELIEANSRDRLLCGGIVLHAHLVTSGIARLTRIAAKLVSFYVECG 65
Query: 80 DVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALR 139
VL ARK FD MP+R++ W MI A+ GY + +L +F M + G++ + F S L+
Sbjct: 66 KVLDARKVFDEMPKRDISGWVVMIGACARYGYYQESLDIFREMNKEGLKLDVFIVPSLLK 125
Query: 140 ACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS 199
A + + G+MI + K F + F+ S+L+D+Y+K G + +A +F+ + +D+V
Sbjct: 126 ASRNLLDREFGKMIHCLVLKCSFESDAFIVSSLIDMYSKFGEVVNARKVFDDLGEQDLVV 185
Query: 200 WNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDL 257
+NAMI G A D++ L + M G+KPD T +++ + +G E K+S+I +L
Sbjct: 186 FNAMISGYANNSQADEALNLVKDMKLLGIKPDIITWNALISGFSHMGNEE--KVSEILEL 243
Query: 258 IIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKE 317
+ +D Y D++S T++ISG + + K
Sbjct: 244 MC--------------LDGYMP-----------------DVVSWTSIISGLVHNFQNEK- 271
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
AFD FK M+ + + + +L C +A++ G++IH ++ V +AL+D
Sbjct: 272 AFDAFKQMLTHGLYPNSATITTLLPACTTLANMKHGKEIHGYSVVTGLEDHGFVRSALLD 331
Query: 378 MYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVT 437
MY K G I++A F + K +++ S+I YA HG +A+EL+ +M+ G + +T
Sbjct: 332 MYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLSDKAVELFDQMEATGEKLDHLT 391
Query: 438 FLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
F ++L ACSH GLT G LF M KYRI PR EH++C+VDL R G+L AY M++ M
Sbjct: 392 FTAILTACSHAGLTDLGQNLFHLMQTKYRIEPRLEHYACMVDLLGRAGKLVEAYEMMKTM 451
Query: 498 NIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNAR 557
++P +W A+LGAC +GN L +AA+ L ++EPE S N ++L+++Y G+W+N
Sbjct: 452 RMEPDLFVWGALLGACRNHGNMELARIAAKRLAELEPENSGNGLLLTSLYADVGSWENVI 511
Query: 558 KTRKLMEERSLRKNPGYSFLQS 579
+ +K+++++ R+ G S++++
Sbjct: 512 RMKKMIKKKRFRRFLGSSWVET 533
>gi|357480561|ref|XP_003610566.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511621|gb|AES92763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 598
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 178/561 (31%), Positives = 318/561 (56%), Gaps = 25/561 (4%)
Query: 34 MSLLQFCIDKKAERQAHLIHAHIITNGYESNLH-----LSTKVIIFYAKVGDVLSARKAF 88
+ L QF + K IHA + + ++ H L +V+ F A+ ++ A K F
Sbjct: 11 LPLNQFLNNAKNISHLKQIHALFLKHLPQNAPHHFFDRLLFRVLHFSAEKSNLYYAHKLF 70
Query: 89 DRMPE-RNVVSWTAMISGY-AQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
D MP N WT++I + + + + + + F+ M + G+ + FT+SS L AC R+
Sbjct: 71 DTMPNCSNCFIWTSLIRAFLSHHTHFRHCISTFAIMHQKGILPSGFTFSSVLNACGRVPA 130
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
+ G+ + + + F+ N V++ALLD+YAKCG++ DA +F+ + +DVV+W AMI G
Sbjct: 131 VFEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGYVCDARDVFDGMVDRDVVAWTAMICG 190
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
A G D+ LF +M + + FT +++ ++ +++D+ +
Sbjct: 191 YAKAGRMVDARLLFDNMGER----NSFTWTTMVAGYANYGDMKAAMELYDV-----MNGK 241
Query: 267 NKLTG-SLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALISGFARDDNHSKEAFDLFKD 324
++T ++I Y K G++ A +++ + + + +C AL++ +A++ H++EA ++++
Sbjct: 242 EEVTWVAMIAGYGKLGNVSEARRIFDEIPVPLNPSTCAALLACYAQN-GHAREAIEMYEK 300
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSY---DAAVGNALIDMYAK 381
M K+ + DV + ++ CA + + R + + + + V NALI M +K
Sbjct: 301 MRRAKIKVTDVAMVGAISACAQLRDI---RMSNLLTYDIEEGFCEKTHIVSNALIHMQSK 357
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
G I A R F+ M ++++ +++++IA +A+HG +AI+L+ KM+ EG+ PN VTF+ +
Sbjct: 358 CGNIDLAWREFNIMRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLTPNQVTFVGV 417
Query: 442 LFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
L ACS +GL EG F M Y I P EH++C+VDL R GQLE AY++I++ +
Sbjct: 418 LNACSTSGLIEEGCRFFQIMTGVYGIEPLPEHYTCMVDLLGRAGQLEKAYSLIKENSTSA 477
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRK 561
A+ W ++L AC +YGN LGE+AAR+LF+++P S NYV+L+N Y + W+ A + +K
Sbjct: 478 DATTWGSLLAACRVYGNVELGEIAARHLFEIDPTDSGNYVLLANTYASNDKWERAEEVKK 537
Query: 562 LMEERSLRKNPGYSFLQSSKK 582
LM ++ ++K GYS++Q K
Sbjct: 538 LMSKKGMKKPSGYSWIQRETK 558
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 187/388 (48%), Gaps = 16/388 (4%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ S+L C A + +HA ++ +G+ N + T ++ YAK G V AR FD M
Sbjct: 117 TFSSVLNACGRVPAVFEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGYVCDARDVFDGM 176
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
+R+VV+WTAMI GYA+ G +A L+F M G R N FT+++ + A ++
Sbjct: 177 VDRDVVAWTAMICGYAKAGRMVDARLLFDNM---GER-NSFTWTTMVAGYANYGDMKAA- 231
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERK-DVVSWNAMIGGLAMQ 210
M + G+ E +V A++ Y K G + +A +F+ I + + A++ A
Sbjct: 232 MELYDVMNGK-EEVTWV--AMIAGYGKLGNVSEARRIFDEIPVPLNPSTCAALLACYAQN 288
Query: 211 GFNDDSFWLFRSMMRQGMK-PDCFTLGSILRASVGGIELMKISQIHDLIIKLGL-ESSNK 268
G ++ ++ M R +K D +G+I ++ + +++S + I+ G E ++
Sbjct: 289 GHAREAIEMYEKMRRAKIKVTDVAMVGAI--SACAQLRDIRMSNLLTYDIEEGFCEKTHI 346
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
++ +LI + +K G+I A++ + M D+ + +A+I+ FA + S++A DLF M +
Sbjct: 347 VSNALIHMQSKCGNIDLAWREFNIMRNRDLYTYSAMIAAFA-EHGKSQDAIDLFLKMQQE 405
Query: 329 KMGIDDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ + V +LN C+ + G R Y ++D+ ++G++
Sbjct: 406 GLTPNQVTFVGVLNACSTSGLIEEGCRFFQIMTGVYGIEPLPEHYTCMVDLLGRAGQLEK 465
Query: 388 ANRAFDEMG-DKNVISWTSLIAGYAKHG 414
A E + +W SL+A +G
Sbjct: 466 AYSLIKENSTSADATTWGSLLAACRVYG 493
>gi|302143938|emb|CBI23043.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 168/503 (33%), Positives = 283/503 (56%), Gaps = 15/503 (2%)
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
N+VSW+A+I G+AQNGYD+ AL + M +G N T +S L ACAR++ L G+ I
Sbjct: 10 NLVSWSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQNLNLGKEIH 69
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND 214
G + + F+ N FV + L+D+Y +C + A +F K+VVS+N MI G G +
Sbjct: 70 GYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVE 129
Query: 215 DSFWLFRSMMRQGMKPDCFTLGSILRASVGGI---ELMKISQIHDLIIKLGLESSNKLTG 271
+ LF M G D + S++ + E +K +Q L E
Sbjct: 130 KAKELFDQMELVG--KDTISWNSMISGYADNLLKCEDLKAAQ---LAFDGVTERDTATWN 184
Query: 272 SLIDVYAKYGSIRSAYQLYRSM----LKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
LI YA + + L + M + ++ + +ISG ++ H++ A LF +M
Sbjct: 185 VLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHV-ENGHNELALRLFTEMQT 243
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ D + ++L CA +A++ G+Q+HA + + D +G AL+DMYAK G I
Sbjct: 244 SSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKH 303
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A + ++ + + N++S +++ YA HG+G E I L++ M G P+ VTFLS+L +C H
Sbjct: 304 AMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVH 363
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
G G E F D++ Y + P +H++C+VDL +R G+L+ AY +++++ KP + +W
Sbjct: 364 AGAVETGHEFF-DLMTYYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWG 422
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
A+LG C I+GN LGE+AA +L ++EP + NYV+L+N+Y AG W + +TR+++++R
Sbjct: 423 ALLGGCVIWGNVELGEIAAESLIELEPNNTGNYVLLANLYAYAGRWHDLDRTRQMIKDRG 482
Query: 568 LRKNPGYSFLQSSKKNILLLEPC 590
+ K+PG S+++ +++I + C
Sbjct: 483 MHKSPGCSWIE-DREDIHVFLSC 504
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 185/413 (44%), Gaps = 20/413 (4%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ G K+AL+ +P+ T S+L C + IH ++ +G+ SN
Sbjct: 23 QNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQNLNLGKEIHGYVTRHGFMSNPF 82
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ ++ Y + D+ SA K F +NVVS+ MI GY +NG E A +F M G
Sbjct: 83 VVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVG 142
Query: 127 VRANQFT-----YSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
+ Y+ L C ++ Q G ++ N+ + YA C
Sbjct: 143 KDTISWNSMISGYADNLLKCEDLKAAQ--LAFDGVTERDTATWNVLISG-----YACCNQ 195
Query: 182 IEDAWILFERIE----RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGS 237
+E+ L ++++ +V +WN +I G G N+ + LF M ++PD +T+G
Sbjct: 196 LENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGI 255
Query: 238 ILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
IL A + + Q+H I+ G E + +L+D+YAK GSI+ A Q+Y + +
Sbjct: 256 ILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPN 315
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
++S A+++ +A H E LF++M+ D V +L+ C + ++ G +
Sbjct: 316 LVSQNAMLTAYAM-HGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFF 374
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK-NVISWTSLIAG 409
Y + ++D+ +++G + +A ++ K + + W +L+ G
Sbjct: 375 DLMTYYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGALLGG 427
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 175/376 (46%), Gaps = 12/376 (3%)
Query: 194 RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ 253
+ ++VSW+A+IGG A G++ ++ L M G +P+ TL S+L A L +
Sbjct: 8 KPNLVSWSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQNLNLGKE 67
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN 313
IH + + G S+ + L+DVY + + SA +++ +++S +I G+ + N
Sbjct: 68 IHGYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGN 127
Query: 314 HSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN 373
K A +LF M L +G D + M++ A+ + AF + D A N
Sbjct: 128 VEK-AKELFDQMEL--VGKDTISWNSMISGYADNLLKCEDLKAAQLAFDGVTERDTATWN 184
Query: 374 ALIDMYAKSGEIADANRAFDEM-GD---KNVISWTSLIAGYAKHGYGHEAIELYKKMKHE 429
LI YA ++ + +M GD NV +W +I+G+ ++G+ A+ L+ +M+
Sbjct: 185 VLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTS 244
Query: 430 GMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLES 489
+ P+ T +L AC+ G ++ I + L + +VD++A+ G ++
Sbjct: 245 SLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELD-VHIGAALVDMYAKCGSIKH 303
Query: 490 AYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF--DMEPEKSVNYVVLSNIY 547
A + +++ P +A+L A +++G+ G RN+ P+ VLS+
Sbjct: 304 AMQVYNRIS-NPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSC- 361
Query: 548 TAAGAWDNARKTRKLM 563
AGA + + LM
Sbjct: 362 VHAGAVETGHEFFDLM 377
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 106/212 (50%), Gaps = 3/212 (1%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPSTYMS--LLQFCIDKKAERQAHLIHAHIITNG 60
I+ + + G + AL+ + L P Y +L C + +HAH I G
Sbjct: 221 IISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQG 280
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
YE ++H+ ++ YAK G + A + ++R+ N+VS AM++ YA +G+ + + +F
Sbjct: 281 YELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFR 340
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
ML +G R + T+ S L +C ++ G + +L + ++DL ++ G
Sbjct: 341 NMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMTYYNVTPSLKHYTCIVDLLSRAG 400
Query: 181 WIEDAWILFERIERK-DVVSWNAMIGGLAMQG 211
+++A+ L ++I RK D V W A++GG + G
Sbjct: 401 RLDEAYELVKKIPRKPDSVMWGALLGGCVIWG 432
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 6/138 (4%)
Query: 394 EMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCE 453
E N++SW+++I G+A++GY EA+EL +M+ G PN T S+L AC+
Sbjct: 5 ENSKPNLVSWSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQNLNL 64
Query: 454 GWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGAC 513
G E+ + ++ + + +VD++ R + SA + ++K S + I+G C
Sbjct: 65 GKEIH-GYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYC 123
Query: 514 SIYGNTSLGELAARNLFD 531
GN A+ LFD
Sbjct: 124 E-NGNVE----KAKELFD 136
>gi|15228257|ref|NP_188283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274288|sp|Q9LUS3.1|PP237_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16610
gi|11994615|dbj|BAB02752.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332642322|gb|AEE75843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 176/553 (31%), Positives = 304/553 (54%), Gaps = 10/553 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
TY +L+ C +A LIH+H+ + + +++++ T ++ FYAK G++ A K FD M
Sbjct: 105 TYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEM 164
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLR-SGVRANQFTYSSALRACARMRWLQGG 150
P+R++V+W AMISG++ + + + +F M R G+ N T A R L+ G
Sbjct: 165 PKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREG 224
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ + G + F +L VK+ +LD+YAK I A +F+ +K+ V+W+AMIGG
Sbjct: 225 KAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVEN 284
Query: 211 GFNDDSFWLFRSMMRQG----MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
++ +F M+ + P +G IL +L +H +K G
Sbjct: 285 EMIKEAGEVFFQMLVNDNVAMVTP--VAIGLILMGCARFGDLSGGRCVHCYAVKAGFILD 342
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ ++I YAKYGS+ A++ + + D+IS +LI+G + +E+F LF +M
Sbjct: 343 LTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVN-CRPEESFRLFHEMR 401
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ D L +L C+++A+L G H + + + + ++ NAL+DMY K G++
Sbjct: 402 TSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLD 461
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A R FD M ++++SW +++ G+ HG G EA+ L+ M+ G+ P++VT L++L ACS
Sbjct: 462 VAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACS 521
Query: 447 HTGLTCEGWELFTDMI-NKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
H+GL EG +LF M + ++PR +H++C+ DL AR G L+ AY+ + +M +P +
Sbjct: 522 HSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRV 581
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
+L AC Y N LG ++ + + E + + V+LSN Y+AA W++A + R + ++
Sbjct: 582 LGTLLSACWTYKNAELGNEVSKKMQSL-GETTESLVLLSNTYSAAERWEDAARIRMIQKK 640
Query: 566 RSLRKNPGYSFLQ 578
R L K PGYS++
Sbjct: 641 RGLLKTPGYSWVD 653
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 160/522 (30%), Positives = 271/522 (51%), Gaps = 31/522 (5%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVII-----FYAKVGDVLSARKA 87
++SLL+ CI + +IH H++ + +L LS+ ++ YA +V AR
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLL----KRSLTLSSSTVLVNLTRLYASCNEVELARHV 57
Query: 88 FDRMPER--NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
FD +P N ++W MI YA N + E AL ++ ML SGVR ++TY L+ACA +R
Sbjct: 58 FDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLR 117
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
+ G++I + F +++V +AL+D YAKCG +E A +F+ + ++D+V+WNAMI
Sbjct: 118 AIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMIS 177
Query: 206 GLAMQGFNDDSFWLFRSMMR-QGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G ++ D LF M R G+ P+ T+ + A L + +H ++G
Sbjct: 178 GFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFS 237
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ + ++DVYAK I A +++ K + ++ +A+I G+ ++ KEA ++F
Sbjct: 238 NDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENE-MIKEAGEVFFQ 296
Query: 325 MILKK--MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
M++ + V + L+L CA L+ GR +H +A K D V N +I YAK
Sbjct: 297 MLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKY 356
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
G + DA R F E+G K+VIS+ SLI G + E+ L+ +M+ G+ P+ T L +L
Sbjct: 357 GSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVL 416
Query: 443 FACSHT-----GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
ACSH G +C G+ + ++ Y + + ++D++ + G+L+ A + M
Sbjct: 417 TACSHLAALGHGSSCHGYCV----VHGYAV--NTSICNALMDMYTKCGKLDVAKRVFDTM 470
Query: 498 NIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVN 539
+ + S W+ +L I+G LG+ A +LF+ E VN
Sbjct: 471 HKRDIVS-WNTMLFGFGIHG---LGK-EALSLFNSMQETGVN 507
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 84/160 (52%), Gaps = 2/160 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D +T + +L C A H + + +GY N + ++ Y K G + A++ F
Sbjct: 408 DITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVF 467
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D M +R++VSW M+ G+ +G + AL +F++M +GV ++ T + L AC+ +
Sbjct: 468 DTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVD 527
Query: 149 GGRMIQGSIQKGRF--VENLFVKSALLDLYAKCGWIEDAW 186
G+ + S+ +G F + + + + DL A+ G++++A+
Sbjct: 528 EGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAY 567
>gi|357481329|ref|XP_003610950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512285|gb|AES93908.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 831
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 170/530 (32%), Positives = 276/530 (52%), Gaps = 40/530 (7%)
Query: 48 QAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYA 107
Q IH + +G+E +LHL ++ YAK GD+ SA F+ + + +VVSW MISGY
Sbjct: 269 QGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISGYG 328
Query: 108 QNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLF 167
E AL F M G + TY + L AC + G ++ GR +
Sbjct: 329 NRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVK----------SGDVKVGRQI---- 374
Query: 168 VKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
F+ + ++SWNA++ G + ++ LFR M Q
Sbjct: 375 ---------------------FDCMSSPSLISWNAILSGYNQSADHGEAVELFRKMQFQW 413
Query: 228 MKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRS 285
PD TL IL A +G +E K Q+H + KLG + SLI+VY+K G +
Sbjct: 414 QNPDRTTLAIILSSCAELGLLEAGK--QVHAVSQKLGFYDDVYVASSLINVYSKCGKMEV 471
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
+ ++ + + D++ ++I+GF+ + + ++A FK M + + + CA
Sbjct: 472 SKHVFSKLSELDVVCWNSMIAGFSIN-SLEQDALACFKRMRQFGFFPSEFSFATIASSCA 530
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
++SL G+QIHA K + VG++L++MY K G++ A FD M KN+++W
Sbjct: 531 KLSSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGKNIVTWNE 590
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
+I GYA +GYG EA+ LYK M G P+D+TF+++L ACSH+ L EG E+F+ M+ K+
Sbjct: 591 MIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTACSHSALVDEGVEIFSSMLQKF 650
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
++P+ +H++C++D R G+ ++ M K +W +L +C ++ N SL + A
Sbjct: 651 EVVPKLDHYTCIIDCLGRVGRFNEVEVILDTMPYKDDTIVWEVVLSSCRVHANVSLAKRA 710
Query: 526 ARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYS 575
A L + P S YV+L+N+Y++ G WD+A+ R LM + + K+PGYS
Sbjct: 711 AEELHRLNPRNSAPYVLLANMYSSMGRWDDAQVVRDLMSDNQIHKDPGYS 760
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 140/527 (26%), Positives = 240/527 (45%), Gaps = 84/527 (15%)
Query: 34 MSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR--- 90
++LLQ CI K+ A +IHA I S+ L +I Y+K + SA FD+
Sbjct: 9 INLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKIPH 68
Query: 91 ----------------------------MPERNVVSWTAMISGYAQNGYDENALLVFSAM 122
MPERN VS +I+ +NGY+ AL + M
Sbjct: 69 KNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLM 128
Query: 123 L-RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
+ V+ + T+++ AC ++ + GR G + K F N++V +ALL +Y KCG
Sbjct: 129 MVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGL 188
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
EDA+ +FE I + V++ M+GGL+ + LFR M+R+G+ D +L +IL
Sbjct: 189 NEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILVI 248
Query: 242 SVGGIEL------------MKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
G+ + QIH L +K G E L SL+D+YAK G + SA +
Sbjct: 249 CAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENV 308
Query: 290 YRSMLKTDIISCTALISGFA-RDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
+ ++ K ++S +ISG+ R D S++A + F+ M DDV ML C
Sbjct: 309 FENLDKHSVVSWNIMISGYGNRCD--SEKALECFQRMQCCGYEPDDVTYINMLTACVKSG 366
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA 408
+ +GRQI FD M ++ISW ++++
Sbjct: 367 DVKVGRQI-----------------------------------FDCMSSPSLISWNAILS 391
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
GY + EA+EL++KM+ + P+ T +L +C+ GL G ++ + K
Sbjct: 392 GYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQVHA-VSQKLGFY 450
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSI 515
S +++++++ G++E + ++ +++ + W++++ SI
Sbjct: 451 DDVYVASSLINVYSKCGKMEVSKHVFSKLS-ELDVVCWNSMIAGFSI 496
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 130/515 (25%), Positives = 244/515 (47%), Gaps = 55/515 (10%)
Query: 3 IVRANFKTGQLKQAL-KFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITN 59
I+ K G +QAL + L + PS T+ ++ C K H ++
Sbjct: 108 IITTMVKNGYERQALDTYDLMMVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKV 167
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G++SN+++S ++ Y K G A + F+ + E N V++T M+ G +Q + L +F
Sbjct: 168 GFDSNIYVSNALLCMYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELF 227
Query: 120 SAMLRSGVRANQFTYSSALRACAR---------MRWLQG---GRMIQGSIQKGRFVENLF 167
MLR G+ + + S+ L CA+ R L G+ I K F +L
Sbjct: 228 RLMLRKGICVDSVSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLH 287
Query: 168 VKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
+ ++LLD+YAK G ++ A +FE +++ VVSWN MI G + ++ + F+ M G
Sbjct: 288 LCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCG 347
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
+PD T ++L A V K G ++
Sbjct: 348 YEPDDVTYINMLTACV-----------------------------------KSGDVKVGR 372
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
Q++ M +IS A++SG+ + +H EA +LF+ M + D L ++L+ CA +
Sbjct: 373 QIFDCMSSPSLISWNAILSGYNQSADHG-EAVELFRKMQFQWQNPDRTTLAIILSSCAEL 431
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI 407
L G+Q+HA + K D V ++LI++Y+K G++ + F ++ + +V+ W S+I
Sbjct: 432 GLLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLSELDVVCWNSMI 491
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRI 467
AG++ + +A+ +K+M+ G P++ +F ++ +C+ +G ++ +I K
Sbjct: 492 AGFSINSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQII-KDGY 550
Query: 468 LPRAEHFSCVVDLFARRGQLESA---YNMIRQMNI 499
+ S +V+++ + G + +A ++M+ NI
Sbjct: 551 VDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGKNI 585
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 205/427 (48%), Gaps = 53/427 (12%)
Query: 138 LRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDV 197
L++C + L ++I I + + F+ + L+DLY+KC I A +F++I K++
Sbjct: 12 LQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKIPHKNI 71
Query: 198 VSWNAM-------------------------------IGGLAMQGFNDDSFWLFRSMM-R 225
S+NA+ I + G+ + + MM
Sbjct: 72 FSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLMMVY 131
Query: 226 QGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRS 285
+ +KP T ++ A G ++ + H L++K+G +S+ ++ +L+ +Y K G
Sbjct: 132 ESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLNED 191
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
A++++ +++ + ++ T ++ G ++ N KE +LF+ M+ K + +D V L +L ICA
Sbjct: 192 AFRVFEGIVEPNEVTFTTMMGGLSQT-NQVKEGLELFRLMLRKGICVDSVSLSTILVICA 250
Query: 346 NVASLNL------------GRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFD 393
S + G+QIH A K+ D + N+L+DMYAK+G++ A F+
Sbjct: 251 KGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFE 310
Query: 394 EMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCE 453
+ +V+SW +I+GY +A+E +++M+ G P+DVT++++L AC +G
Sbjct: 311 NLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVKV 370
Query: 454 GWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIK---PTASLWSAIL 510
G ++F M + P ++ ++ + + A + R+M + P + + IL
Sbjct: 371 GRQIFDCMSS-----PSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIIL 425
Query: 511 GACSIYG 517
+C+ G
Sbjct: 426 SSCAELG 432
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 128/230 (55%), Gaps = 4/230 (1%)
Query: 12 QLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKV 71
+L + ++F PD +T +L C + +HA G+ ++++++ +
Sbjct: 404 ELFRKMQFQWQNPDR----TTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSL 459
Query: 72 IIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQ 131
I Y+K G + ++ F ++ E +VV W +MI+G++ N +++AL F M + G ++
Sbjct: 460 INVYSKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQDALACFKRMRQFGFFPSE 519
Query: 132 FTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER 191
F++++ +CA++ L G+ I I K +V+N+FV S+L+++Y KCG + A F+
Sbjct: 520 FSFATIASSCAKLSSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGDVGAARYYFDM 579
Query: 192 IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
+ K++V+WN MI G A G+ ++ L++ M+ G KPD T ++L A
Sbjct: 580 MPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTA 629
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 162/388 (41%), Gaps = 52/388 (13%)
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
M+ L ++L++ + L IH I + L S L LID+Y+K I SA+
Sbjct: 1 MEVKSLNLINLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAH 60
Query: 288 QLYRSMLKTDIISCTALISGFARDDN------------------------------HSKE 317
++ + +I S A++S F + +N + ++
Sbjct: 61 HVFDKIPHKNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQ 120
Query: 318 AFDLFK-DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALI 376
A D + M+ + + + + + C + +N GR+ H K + V NAL+
Sbjct: 121 ALDTYDLMMVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALL 180
Query: 377 DMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDV 436
MY K G DA R F+ + + N +++T+++ G ++ E +EL++ M +G+ + V
Sbjct: 181 CMYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSV 240
Query: 437 TFLSLLFACSHT---GLTCEGWELFTDMINKYRILPRAEH--------FSCVVDLFARRG 485
+ ++L C+ G+ + L T+ K +H + ++D++A+ G
Sbjct: 241 SLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTG 300
Query: 486 QLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDM-----EPEKSVNY 540
++SA N+ ++ K + W+ ++ YGN E A M EP+ V Y
Sbjct: 301 DMDSAENVFENLD-KHSVVSWNIMISG---YGNRCDSEKALECFQRMQCCGYEPD-DVTY 355
Query: 541 VVLSNIYTAAGAWDNARKTRKLMEERSL 568
+ + +G R+ M SL
Sbjct: 356 INMLTACVKSGDVKVGRQIFDCMSSPSL 383
>gi|224095278|ref|XP_002310370.1| predicted protein [Populus trichocarpa]
gi|222853273|gb|EEE90820.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 181/553 (32%), Positives = 290/553 (52%), Gaps = 4/553 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ S+L+ +H+ I+ GYE +++ + ++ YAK V A F
Sbjct: 101 DGYTFGSILKGVAHACRHDLGQQVHSLIVKIGYEQSVYAGSALLDMYAKCERVEDAYDVF 160
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
MP RN VSW A+I G+ Q G + A + M + GVR T++ L ++ +
Sbjct: 161 QGMPVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQKEGVRVEDGTFAPLLTLLDGDKFYK 220
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE-RIERKDVVSWNAMIGGL 207
+ I K + +A L Y++CG +EDA +F+ + +D+V+WN+M+
Sbjct: 221 LTMQLHCKIIKHGLEFYNALCNATLTAYSECGLLEDAKRVFDGAVGTRDLVTWNSMLVAY 280
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
+ ++D+F LF M G +PD +T ++ A H L+IK GLE S
Sbjct: 281 LVHDKDEDAFNLFLEMQGFGFEPDIYTYTCVISACFAAAHKNYGKSFHALVIKRGLEESV 340
Query: 268 KLTGSLIDVYAKYG--SIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ +LI +Y K S+ +A L+ SM D +S ++++GF++ S++A LF M
Sbjct: 341 TICNALITMYLKLNNKSMEAALNLFHSMKSKDRVSWNSILTGFSQM-GFSEDALKLFGHM 399
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
IDD +L C+++A L LG+QIH K + V ++LI MY+K G I
Sbjct: 400 RSSLEEIDDYAYSAVLRSCSDLAILQLGQQIHLLTVKTGFDSNDFVASSLIFMYSKCGII 459
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
DA + F++ ++ I+W S++ YA+HG G A++L+ M+ + + VTF+++L AC
Sbjct: 460 EDAWKCFEDTTKESSITWNSIMFAYAQHGQGDVALDLFSIMREREVKLDHVTFVAVLTAC 519
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
SH GL +G + M + Y I PR EH++C VDLF R G LE A +I M +P A +
Sbjct: 520 SHVGLVEQGRCVLKSMESDYGIPPRMEHYACAVDLFGRAGYLEEAKALIDSMPFQPNAMV 579
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
+LGAC GN L A L ++EPE+ YV+LSN+Y WD+ +LM E
Sbjct: 580 LKTLLGACRACGNIELAAQVASQLLEVEPEEHCTYVILSNMYGHLKRWDDKASVTRLMRE 639
Query: 566 RSLRKNPGYSFLQ 578
R ++K PG+S+++
Sbjct: 640 RKVKKVPGWSWIE 652
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 145/556 (26%), Positives = 262/556 (47%), Gaps = 59/556 (10%)
Query: 51 LIHAHIITNGYESNLHLSTKVIIFYAKV--GDVLSARKAFDRMPERNVVSWTAMISGYAQ 108
L H +G S+++++ ++ Y+K GD+ A K FD MP ++ V+W MI+GY +
Sbjct: 20 LTHCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITGYVE 79
Query: 109 NGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFV 168
+G A +M R G +A+ +T+ S L+ A G+ + I K + ++++
Sbjct: 80 SGNLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIVKIGYEQSVYA 139
Query: 169 KSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGM 228
SALLD+YAKC +EDA+ +F+ + ++ VSWNA+I G G D +FWL M ++G+
Sbjct: 140 GSALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQKEGV 199
Query: 229 KPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
+ + T +L + G + K++ Q+H IIK GLE N L + + Y++ G + A
Sbjct: 200 RVEDGTFAPLLTL-LDGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYSECGLLEDAK 258
Query: 288 QLYRSMLKT-DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICAN 346
+++ + T D+++ +++ + D ++AF+LF +M D +++ C
Sbjct: 259 RVFDGAVGTRDLVTWNSMLVAYLVHDK-DEDAFNLFLEMQGFGFEPDIYTYTCVISACFA 317
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK--SGEIADANRAFDEMGDKNVISWT 404
A N G+ HA K + NALI MY K + + A F M K+ +SW
Sbjct: 318 AAHKNYGKSFHALVIKRGLEESVTICNALITMYLKLNNKSMEAALNLFHSMKSKDRVSWN 377
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHE----------------------------------- 429
S++ G+++ G+ +A++L+ M+
Sbjct: 378 SILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLGQQIHLLTVKT 437
Query: 430 GMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLES 489
G ND SL+F S G+ + W+ F D + I + F+ +A+ GQ +
Sbjct: 438 GFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESSITWNSIMFA-----YAQHGQGDV 492
Query: 490 A---YNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDME-----PEKSVNYV 541
A ++++R+ +K + A+L ACS G G ++ ME P + +Y
Sbjct: 493 ALDLFSIMREREVKLDHVTFVAVLTACSHVGLVEQGRCVLKS---MESDYGIPPRMEHYA 549
Query: 542 VLSNIYTAAGAWDNAR 557
+++ AG + A+
Sbjct: 550 CAVDLFGRAGYLEEAK 565
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 92/178 (51%), Gaps = 5/178 (2%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D Y ++L+ C D + IH + G++SN +++ +I Y+K G + A K
Sbjct: 406 IDDYAYSAVLRSCSDLAILQLGQQIHLLTVKTGFDSNDFVASSLIFMYSKCGIIEDAWKC 465
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F+ + + ++W +++ YAQ+G + AL +FS M V+ + T+ + L AC+ + +
Sbjct: 466 FEDTTKESSITWNSIMFAYAQHGQGDVALDLFSIMREREVKLDHVTFVAVLTACSHVGLV 525
Query: 148 QGGRMIQGSIQKGRFVENLFVKSAL-LDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
+ GR + S++ + A +DL+ + G++E+A L + + + NAM+
Sbjct: 526 EQGRCVLKSMESDYGIPPRMEHYACAVDLFGRAGYLEEAKALIDSMPFQP----NAMV 579
>gi|224127716|ref|XP_002320145.1| predicted protein [Populus trichocarpa]
gi|222860918|gb|EEE98460.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 173/540 (32%), Positives = 293/540 (54%), Gaps = 12/540 (2%)
Query: 47 RQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGY 106
R+ +H+H+I G+ + L L +++ Y K D A + FD M RNVV+W +I G
Sbjct: 5 REGKQVHSHVIKLGFCNVLSLQNQILNVYIKCKDFNYAHRLFDEMHVRNVVTWNTVICGL 64
Query: 107 AQ---NGYDENALL---VFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKG 160
+ Y+ + + F ML V + T + LRAC + ++ GR + I K
Sbjct: 65 VDCRGSDYESSVYMGFCYFRKMLLDKVGFDAITLNGLLRACLELNDVEIGRELHCFIVKL 124
Query: 161 RFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLF 220
F N FV SAL+DLY KCG +++A F+ + +D+V WN M+ AM +++ F
Sbjct: 125 GFAVNSFVNSALVDLYGKCGLVKEARRAFDEVYCRDLVLWNVMLSCYAMNCLAEEASGFF 184
Query: 221 RSMMRQGMKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYA 278
+ M + D FT S+L + ++G L + QIH L IKL + + L+D+YA
Sbjct: 185 KLMQEENFMTDGFTFSSMLNSCGTLGSCNLGR--QIHGLSIKLSFDLDVLVASGLVDMYA 242
Query: 279 KYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILC 338
K +I A + + M +++S ++ G+ R + EA L M + + D++ L
Sbjct: 243 KSENIDDARKAFDGMAARNVVSWNTMVVGYGRLGD-GGEAMKLLIGMFQEDLRPDEITLA 301
Query: 339 LMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK 398
++ C++ + Q++A+ K ++ NALI+ Y+K G IA A + F+ + +
Sbjct: 302 SIIRSCSSALTSCEIMQVNAYVLKNGFHAFLSIANALINAYSKGGSIAMALQCFNTVLEP 361
Query: 399 NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELF 458
++++WTSLI YA H +I+ +++M +G+ P+ + FL +L ACSH GL EG F
Sbjct: 362 DLVTWTSLIGAYAFHSLPKNSIDTFEEMLADGVWPDQIVFLEVLSACSHAGLVNEGLHYF 421
Query: 459 TDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
+ ++ Y ILP EH++C++DL R G L+ A+N++ M+I ++ A +GAC I+G+
Sbjct: 422 S-LMKDYHILPGLEHYTCLIDLLGRAGLLDEAFNILNSMSIGYSSDTLGAFIGACKIHGD 480
Query: 519 TSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
L + AA LF+MEP K VNY ++S+++ + G W + + KLM +R PG S+++
Sbjct: 481 VKLAKWAAEKLFEMEPNKPVNYTLMSSVFASEGHWHDVARIHKLMRDRCGHGVPGCSWME 540
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 199/380 (52%), Gaps = 19/380 (5%)
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
M +L+ G+ + + K F L +++ +L++Y KC A LF+ + ++VV+WN +
Sbjct: 1 MGFLREGKQVHSHVIKLGFCNVLSLQNQILNVYIKCKDFNYAHRLFDEMHVRNVVTWNTV 60
Query: 204 IGGLA-MQGFNDDS-----FWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDL 257
I GL +G + +S F FR M+ + D TL +LRA + ++ ++H
Sbjct: 61 ICGLVDCRGSDYESSVYMGFCYFRKMLLDKVGFDAITLNGLLRACLELNDVEIGRELHCF 120
Query: 258 IIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKE 317
I+KLG ++ + +L+D+Y K G ++ A + + + D++ ++S +A + ++E
Sbjct: 121 IVKLGFAVNSFVNSALVDLYGKCGLVKEARRAFDEVYCRDLVLWNVMLSCYAMN-CLAEE 179
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
A FK M + D MLN C + S NLGRQIH + K D V + L+D
Sbjct: 180 ASGFFKLMQEENFMTDGFTFSSMLNSCGTLGSCNLGRQIHGLSIKLSFDLDVLVASGLVD 239
Query: 378 MYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVT 437
MYAKS I DA +AFD M +NV+SW +++ GY + G G EA++L M E + P+++T
Sbjct: 240 MYAKSENIDDARKAFDGMAARNVVSWNTMVVGYGRLGDGGEAMKLLIGMFQEDLRPDEIT 299
Query: 438 FLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEH-----FSCVVDLFARRGQLESAYN 492
S++ +CS +CE + +N Y +L H + +++ +++ G + A
Sbjct: 300 LASIIRSCSSALTSCEIMQ-----VNAY-VLKNGFHAFLSIANALINAYSKGGSIAMALQ 353
Query: 493 MIRQMNIKPTASLWSAILGA 512
+ ++P W++++GA
Sbjct: 354 CFNTV-LEPDLVTWTSLIGA 372
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 184/370 (49%), Gaps = 5/370 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
D T LL+ C++ +H I+ G+ N +++ ++ Y K G V AR+A
Sbjct: 93 FDAITLNGLLRACLELNDVEIGRELHCFIVKLGFAVNSFVNSALVDLYGKCGLVKEARRA 152
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD + R++V W M+S YA N E A F M + FT+SS L +C +
Sbjct: 153 FDEVYCRDLVLWNVMLSCYAMNCLAEEASGFFKLMQEENFMTDGFTFSSMLNSCGTLGSC 212
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
GR I G K F ++ V S L+D+YAK I+DA F+ + ++VVSWN M+ G
Sbjct: 213 NLGRQIHGLSIKLSFDLDVLVASGLVDMYAKSENIDDARKAFDGMAARNVVSWNTMVVGY 272
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
G ++ L M ++ ++PD TL SI+R+ + +I Q++ ++K G +
Sbjct: 273 GRLGDGGEAMKLLIGMFQEDLRPDEITLASIIRSCSSALTSCEIMQVNAYVLKNGFHAFL 332
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHS--KEAFDLFKDM 325
+ +LI+ Y+K GSI A Q + ++L+ D+++ T+LI +A HS K + D F++M
Sbjct: 333 SIANALINAYSKGGSIAMALQCFNTVLEPDLVTWTSLIGAYAF---HSLPKNSIDTFEEM 389
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ + D ++ +L+ C++ +N G + Y LID+ ++G +
Sbjct: 390 LADGVWPDQIVFLEVLSACSHAGLVNEGLHYFSLMKDYHILPGLEHYTCLIDLLGRAGLL 449
Query: 386 ADANRAFDEM 395
+A + M
Sbjct: 450 DEAFNILNSM 459
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 179/550 (32%), Positives = 300/550 (54%), Gaps = 38/550 (6%)
Query: 68 STKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV 127
S K+I GD+ A FD++PE ++ +WT +ISG+ Q+G+ + A+ ++S +L V
Sbjct: 14 SIKLIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNV 73
Query: 128 RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWI 187
R ++F S +ACA L + I + F ++L + +AL+D++ KC ++ A
Sbjct: 74 RPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARC 133
Query: 188 LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIE 247
+F+ + KDVVSW +M G LFR M G++ + T+ SIL A I+
Sbjct: 134 VFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADYIK 193
Query: 248 LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG 307
L + ++H I++ +E + ++ +L+++YA ++ A ++ SM DI+S +++
Sbjct: 194 LGR--EVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTA 251
Query: 308 FARDDNHSKEAFDLFKDMILKKMGIDDV--------------------ILCLM------- 340
+ + + + LF M + + ++ ILC M
Sbjct: 252 YFLNKEYER-GLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKP 310
Query: 341 --------LNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAF 392
L C N+ SL G++IH + F++ D + AL+ +YAK G++ + F
Sbjct: 311 NRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVF 370
Query: 393 DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTC 452
+ M K+V++W ++I + HG G E++ L+ KM G+ PN VTF+ +L CSH+ L
Sbjct: 371 NTMPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLAD 430
Query: 453 EGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
EG +F M +++ I P A+H+SC+VD+ +R G+LE AY+ IR+M I+PTA+ W A+LGA
Sbjct: 431 EGLLVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGALLGA 490
Query: 513 CSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNP 572
C +Y N LG LAA LF++EP+ + NYV+LSNI A W A + RK+M ++ L K P
Sbjct: 491 CRVYKNVELGTLAASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAKTP 550
Query: 573 GYSFLQSSKK 582
G S++Q K
Sbjct: 551 GRSWVQVKNK 560
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 144/306 (47%), Gaps = 54/306 (17%)
Query: 32 TYMSLLQFCIDK-KAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
T S+L C D K R+ +H I+ N E N+++S+ ++ YA + AR FD
Sbjct: 180 TVSSILPACADYIKLGRE---VHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDS 236
Query: 91 MPERNVVSWTAM-----------------------------------ISGYAQNGYDENA 115
M R++VSW M ISG QNG E A
Sbjct: 237 MYHRDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELA 296
Query: 116 LLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDL 175
L + M SG++ N+ T SAL C + L+GG+ I G + + F+E++ + +AL+ L
Sbjct: 297 LGILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLL 356
Query: 176 YAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTL 235
YAKCG +E + +F + RKDVV+WN MI +M G +S LF M+ G++P+ T
Sbjct: 357 YAKCGDLELSRHVFNTMPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTF 416
Query: 236 GSILRASVGGIELMKISQIHD--LIIKLGLESSNKLT------GSLIDVYAKYGSIRSAY 287
+G + SQ+ D L++ + S + +T ++DV ++ G + AY
Sbjct: 417 -------IGVLSGCSHSQLADEGLLVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAY 469
Query: 288 QLYRSM 293
R M
Sbjct: 470 DFIRKM 475
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 177/378 (46%), Gaps = 43/378 (11%)
Query: 49 AHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQ 108
A IH I G+ +L L +I + K V AR FD M ++VVSWT+M Y
Sbjct: 96 AKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVVSWTSMTYCYVN 155
Query: 109 NGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFV 168
G +L+F M +G+RAN T SS L ACA +++ GR + G I + N++V
Sbjct: 156 CGMCRQGILLFREMGLNGIRANSLTVSSILPACA--DYIKLGREVHGFILRNEMEGNVYV 213
Query: 169 KSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGM 228
SAL+++YA ++ A ++F+ + +D+VSWN M+ + + LF M ++G+
Sbjct: 214 SSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGI 273
Query: 229 KPD----------C-------FTLGSILRASVGGIELMKIS------------------Q 253
K + C LG + + GI+ +I+ +
Sbjct: 274 KLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKE 333
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN 313
IH + + +T +L+ +YAK G + + ++ +M + D+++ +I +
Sbjct: 334 IHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWNTMIMA---NSM 390
Query: 314 HSK--EAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI-HAFAFKYQSSYDAA 370
H K E+ LF M+ + + V +L+ C++ + G + ++ + ++ + DA
Sbjct: 391 HGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHSITPDAD 450
Query: 371 VGNALIDMYAKSGEIADA 388
+ ++D+ +++G + +A
Sbjct: 451 HYSCMVDVLSRAGRLEEA 468
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 97/187 (51%), Gaps = 3/187 (1%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ GQ + AL D+ + P+ T +S L C + ++ R IH ++ + + ++
Sbjct: 289 QNGQHELALGILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVT 348
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
++T +++ YAK GD+ +R F+ MP ++VV+W MI + +G +L++F+ ML SG
Sbjct: 349 ITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSG 408
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSI-QKGRFVENLFVKSALLDLYAKCGWIEDA 185
V N T+ L C+ + G ++ S+ + + S ++D+ ++ G +E+A
Sbjct: 409 VEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEA 468
Query: 186 WILFERI 192
+ ++
Sbjct: 469 YDFIRKM 475
>gi|302790816|ref|XP_002977175.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
gi|300155151|gb|EFJ21784.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
Length = 806
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 170/506 (33%), Positives = 277/506 (54%), Gaps = 7/506 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IH I + + + + + +I Y + G + A + F MP RNVVSWT+MI+ AQ+G+
Sbjct: 271 IHDKIQSEIHGTRVLVLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQSGH 330
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACA---RMRWLQGGRMIQGSIQKGRFVENLFV 168
A+ +F M+ G+ N+ TY+S + A A R L GR I I + V
Sbjct: 331 YSFAVKLFDGMIAEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIV 390
Query: 169 KSALLDLYAKCGWIEDAWILFERI--ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ 226
+++L+++YA+ G + +A +F+ I K VVS+ MI A G + +FR M +
Sbjct: 391 QNSLINMYARSGLLAEAREVFDSILENSKTVVSFTTMIAAYAHNGHPRQALEIFREMTAR 450
Query: 227 GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT-GSLIDVYAKYGSIRS 285
G+ P+ T ++L A V +L + IH+ +I+ GL+SS+ SL+D+YAK G +
Sbjct: 451 GVAPNEITFATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGF 510
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
A +++ +M D+++ T +I+ + N ++ A DL+ M+ + D L +L CA
Sbjct: 511 AARVFETMKTKDLVAWTTIIAANVQSGN-NRAALDLYDRMLQSGIHPDIATLSTLLVACA 569
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
N+ L +G +IH A + + DA NAL MYAK G + A R + +V +WTS
Sbjct: 570 NLGDLAMGEKIHRQALRSKLEQDAHFQNALAAMYAKCGSLEKATRLYRRCRGSDVATWTS 629
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
++A +++ G A+ELY +M+ EG+ PN+VTF+ +L +CS GL EG E F + + Y
Sbjct: 630 MLAAHSQQGLASVALELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHSITSDY 689
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
P AEHF C+VD+ R G+L A ++ M P W ++L +C ++ + +G A
Sbjct: 690 GSQPSAEHFGCMVDVLGRAGKLRDAEELLDSMPFYPDEIAWQSLLSSCKLHTDAEIGTRA 749
Query: 526 ARNLFDMEPEKSVNYVVLSNIYTAAG 551
A L +++PE + +V LS IY AAG
Sbjct: 750 AECLLELDPESTSQFVALSQIYAAAG 775
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 143/522 (27%), Positives = 261/522 (50%), Gaps = 17/522 (3%)
Query: 21 LSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGD 80
+S +T +M + C K Q IH + T G N + + ++ YA+ G
Sbjct: 142 MSVENTQPSACGFMWAIVACGRIKDLAQGRSIHYRVAT-GRGINSSIQSALVTMYAQCGR 200
Query: 81 VLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRA 140
+ A AFD E W A++S A G+ A+ +F M + + + + + AL A
Sbjct: 201 IDLAMAAFDDNRELGTAPWNAIMSALAGAGHHRRAIELFFQMEQH--QCSDRSCAIALGA 258
Query: 141 CARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSW 200
CA L+GG I IQ + V +AL+ +Y +CG +++A +F + ++VVSW
Sbjct: 259 CAAAGHLRGGIQIHDKIQSEIHGTRVLVLNALISMYVRCGKLDEALRVFADMPHRNVVSW 318
Query: 201 NAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELM-KISQIHDL 257
+MI +A G + LF M+ +G+ P+ T S++ A +G ++ + +IH
Sbjct: 319 TSMIAAVAQSGHYSFAVKLFDGMIAEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQ 378
Query: 258 IIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD--IISCTALISGFARDDNHS 315
I G+++ + SLI++YA+ G + A +++ S+L+ ++S T +I+ +A + H
Sbjct: 379 ITASGIDADPIVQNSLINMYARSGLLAEAREVFDSILENSKTVVSFTTMIAAYAH-NGHP 437
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ-SSYDAAVGNA 374
++A ++F++M + + +++ +L C + L G IH + S D N+
Sbjct: 438 RQALEIFREMTARGVAPNEITFATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNS 497
Query: 375 LIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
L+DMYAK G++ A R F+ M K++++WT++IA + G A++LY +M G+ P+
Sbjct: 498 LVDMYAKCGDLGFAARVFETMKTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPD 557
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF-SCVVDLFARRGQLESAYNM 493
T +LL AC++ G G ++ + L + HF + + ++A+ G LE A +
Sbjct: 558 IATLSTLLVACANLGDLAMGEKIHRQALRSK--LEQDAHFQNALAAMYAKCGSLEKATRL 615
Query: 494 IRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPE 535
R+ A+ W+++L A S G L +A +ME E
Sbjct: 616 YRRCRGSDVAT-WTSMLAAHSQQG---LASVALELYAEMESE 653
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 140/508 (27%), Positives = 243/508 (47%), Gaps = 22/508 (4%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y +LL+ C +++A +HAHI++ N L V YA+ +A FD MP
Sbjct: 53 YANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDAMP 112
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
+R W ++ + + L ++ M + + + A+ AC R++ L GR
Sbjct: 113 DRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRS 172
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF 212
I + GR + N ++SAL+ +YA+CG I+ A F+ WNA++ LA G
Sbjct: 173 IHYRVATGRGI-NSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGH 231
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRASV----GGIELMKISQIHDLIIKLGLESSNK 268
+ + LF M + + A+ GGI QIHD I +
Sbjct: 232 HRRAIELFFQMEQHQCSDRSCAIALGACAAAGHLRGGI------QIHDKIQSEIHGTRVL 285
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +LI +Y + G + A +++ M +++S T++I+ A+ H A LF MI +
Sbjct: 286 VLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQ-SGHYSFAVKLFDGMIAE 344
Query: 329 KMGIDDVILCLMLNICANV---ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ ++ +++ A++ A L+ GR+IH+ D V N+LI+MYA+SG +
Sbjct: 345 GINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLL 404
Query: 386 ADANRAFDEM--GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
A+A FD + K V+S+T++IA YA +G+ +A+E++++M G+ PN++TF ++L
Sbjct: 405 AEAREVFDSILENSKTVVSFTTMIAAYAHNGHPRQALEIFREMTARGVAPNEITFATVLA 464
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
AC G G + MI ++ +VD++A+ G L A + M K
Sbjct: 465 ACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLV 524
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFD 531
+ W+ I+ A GN AA +L+D
Sbjct: 525 A-WTTIIAANVQSGNNR----AALDLYD 547
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 117/494 (23%), Positives = 205/494 (41%), Gaps = 60/494 (12%)
Query: 123 LRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWI 182
LR + Y++ LR C R L GR + I R N + + +YA+C
Sbjct: 42 LRHRSTSQLLLYANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCF 101
Query: 183 EDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD-CFTLGSILRA 241
+ A LF+ + + WN ++ D+ L+R M + +P C + +I+
Sbjct: 102 DTAIALFDAMPDRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIV-- 159
Query: 242 SVGGI-ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
+ G I +L + IH + G ++ + +L+ +YA+ G I A + +
Sbjct: 160 ACGRIKDLAQGRSIH-YRVATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAP 218
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
A++S A H + A +LF M ++ D + L CA L G QIH
Sbjct: 219 WNAIMSALA-GAGHHRRAIELFFQM--EQHQCSDRSCAIALGACAAAGHLRGGIQIHD-- 273
Query: 361 FKYQSSYDAA---VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
K QS V NALI MY + G++ +A R F +M +NV+SWTS+IA A+ G+
Sbjct: 274 -KIQSEIHGTRVLVLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQSGHYS 332
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSH------------------------------ 447
A++L+ M EG+ PN+ T+ S++ A +H
Sbjct: 333 FAVKLFDGMIAEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQN 392
Query: 448 --------TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMN- 498
+GL E E+F ++ + + F+ ++ +A G A + R+M
Sbjct: 393 SLINMYARSGLLAEAREVFDSILENSKTVV---SFTTMIAAYAHNGHPRQALEIFREMTA 449
Query: 499 --IKPTASLWSAILGACSIYGNTSLGELAARNLFD--MEPEKSVNYVVLSNIYTAAGAWD 554
+ P ++ +L AC G+ + G + + ++ Y L ++Y G
Sbjct: 450 RGVAPNEITFATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLG 509
Query: 555 NARKTRKLMEERSL 568
A + + M+ + L
Sbjct: 510 FAARVFETMKTKDL 523
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 93/207 (44%), Gaps = 4/207 (1%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDP--STYMSLLQFCIDKKAERQAHLIHAHIITN 59
I+ AN ++G + AL + + P +T +LL C + IH + +
Sbjct: 528 TIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRS 587
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
E + H + YAK G + A + + R +V +WT+M++ ++Q G AL ++
Sbjct: 588 KLEQDAHFQNALAAMYAKCGSLEKATRLYRRCRGSDVATWTSMLAAHSQQGLASVALELY 647
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK-SALLDLYAK 178
+ M GVR N+ T+ L +C++ + GR SI + ++D+ +
Sbjct: 648 AEMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHSITSDYGSQPSAEHFGCMVDVLGR 707
Query: 179 CGWIEDAWILFERIE-RKDVVSWNAMI 204
G + DA L + + D ++W +++
Sbjct: 708 AGKLRDAEELLDSMPFYPDEIAWQSLL 734
>gi|449473751|ref|XP_004153972.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Cucumis sativus]
Length = 591
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 178/538 (33%), Positives = 294/538 (54%), Gaps = 16/538 (2%)
Query: 49 AHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQ 108
A ++H I G+ S+L+ ++ Y K G ++SAR FD MP R++VSWT+MIS Y
Sbjct: 30 AGMVHCVGIRMGFSSDLYFCNTMMEVYGKCGCMVSARDVFDEMPNRDLVSWTSMISAYVN 89
Query: 109 NGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFV 168
G AL +F M R + N T L+AC ++L GR++Q + K + + +
Sbjct: 90 GGDVFCALDIFEGMRRE-LEPNSVTVMVMLQACCATQYLVLGRLLQCYVVKNGLLFDTHL 148
Query: 169 KSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGM 228
+++ L +Y++ G ++ + F I+ K+ VSWN ++ + G + +M G
Sbjct: 149 QNSFLRMYSRLGRQDEFGVFFSEIDFKNAVSWNILMSFYSSMGDIVKVVDILNKIM--GE 206
Query: 229 KPDCFTLGSILRASVGGIE---LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRS 285
P +IL + + + LM +H L IK GL L SL+ +YAK+G + +
Sbjct: 207 VPLSIETLTILISGIATSDSRCLMLGENLHSLAIKSGL-YDGILCTSLLGMYAKFGELEN 265
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
+ L++ + I++ A++S F ++ H +A D+FK M + + IL +++ A
Sbjct: 266 STSLFKEIPNRSIVTWGAMMSSFIQN-GHFDDAVDIFKQMQVAGLKPSVGILKHLIDAYA 324
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGN-----ALIDMYAKSGEIADANRAFDEMGDKNV 400
+ +L LG+ IH + Y V N ++++MY + G IA A + FD + K+V
Sbjct: 325 FLGALQLGKAIHCCLIRI---YGFVVCNTRLETSVLNMYVRCGSIASARKCFDLIIIKDV 381
Query: 401 ISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTD 460
++WTS+I GY HG G +A+ L+ +M E + PN+VTFLSLL ACSH+GL EG E+F
Sbjct: 382 VAWTSMIEGYGAHGLGVDALNLFHQMTSEEVTPNNVTFLSLLSACSHSGLVSEGCEIFYS 441
Query: 461 MINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTS 520
M +++ I P EH++C VDL +R ++ A+ +I +M +W A++GAC +YG+
Sbjct: 442 MRSRFNIKPDLEHYTCFVDLLSRSTRVREAFAIILRMTSLCDGRIWGALMGACRVYGDNK 501
Query: 521 LGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+ AA L ++EP+ Y +LSN + G W A K R L+ E+ L K PG+SF++
Sbjct: 502 IANYAAHRLLELEPDNVGYYTLLSNSQASVGQWHEAEKLRSLVYEKDLVKKPGWSFIE 559
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 198/426 (46%), Gaps = 19/426 (4%)
Query: 28 LDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
L+P+ T M +LQ C + L+ +++ NG + HL + Y+++G
Sbjct: 107 LEPNSVTVMVMLQACCATQYLVLGRLLQCYVVKNGLLFDTHLQNSFLRMYSRLGRQDEFG 166
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML-RSGVRANQFTYSSALRACARM 144
F + +N VSW ++S Y+ G + + + ++ + T + A +
Sbjct: 167 VFFSEIDFKNAVSWNILMSFYSSMGDIVKVVDILNKIMGEVPLSIETLTILISGIATSDS 226
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
R L G + K + + S LL +YAK G +E++ LF+ I + +V+W AM+
Sbjct: 227 RCLMLGENLHSLAIKSGLYDGILCTS-LLGMYAKFGELENSTSLFKEIPNRSIVTWGAMM 285
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS--VGGIELMKISQIHDLIIKL- 261
G DD+ +F+ M G+KP L ++ A +G ++L K IH +I++
Sbjct: 286 SSFIQNGHFDDAVDIFKQMQVAGLKPSVGILKHLIDAYAFLGALQLGK--AIHCCLIRIY 343
Query: 262 GLESSN-KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFD 320
G N +L S++++Y + GSI SA + + ++ D+++ T++I G+ +A +
Sbjct: 344 GFVVCNTRLETSVLNMYVRCGSIASARKCFDLIIIKDVVAWTSMIEGYGA-HGLGVDALN 402
Query: 321 LFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI-HAFAFKYQSSYDAAVGNALIDMY 379
LF M +++ ++V +L+ C++ ++ G +I ++ ++ D +D+
Sbjct: 403 LFHQMTSEEVTPNNVTFLSLLSACSHSGLVSEGCEIFYSMRSRFNIKPDLEHYTCFVDLL 462
Query: 380 AKSGEIADANRAFDEMG---DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDV 436
++S + +A M D + W +L+ A YG I Y + + P++V
Sbjct: 463 SRSTRVREAFAIILRMTSLCDGRI--WGALMG--ACRVYGDNKIANYAAHRLLELEPDNV 518
Query: 437 TFLSLL 442
+ +LL
Sbjct: 519 GYYTLL 524
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 162/375 (43%), Gaps = 43/375 (11%)
Query: 228 MKPDCFTLGSILRASVG-GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSA 286
++ D FTL + + ++ +++ +H + I++G S ++++VY K G + SA
Sbjct: 6 VEHDGFTLPIVNQVTMSIWVDVAYAGMVHCVGIRMGFSSDLYFCNTMMEVYGKCGCMVSA 65
Query: 287 YQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICAN 346
++ M D++S T++IS + + A D+F+ M +++ + V + +ML C
Sbjct: 66 RDVFDEMPNRDLVSWTSMISAYV-NGGDVFCALDIFEGM-RRELEPNSVTVMVMLQACCA 123
Query: 347 VASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
L LGR + + K +D + N+ + MY++ G + F E+ KN +SW L
Sbjct: 124 TQYLVLGRLLQCYVVKNGLLFDTHLQNSFLRMYSRLGRQDEFGVFFSEIDFKNAVSWNIL 183
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT------------------ 448
++ Y+ G + +++ K+ G VP + L++L + T
Sbjct: 184 MSFYSSMGDIVKVVDILNKIM--GEVPLSIETLTILISGIATSDSRCLMLGENLHSLAIK 241
Query: 449 -----GLTCEG----WELFTDMINKYRILPRAEHFSCV-----VDLFARRGQLESAYNMI 494
G+ C + F ++ N + + S V + F + G + A ++
Sbjct: 242 SGLYDGILCTSLLGMYAKFGELENSTSLFKEIPNRSIVTWGAMMSSFIQNGHFDDAVDIF 301
Query: 495 RQMNI---KPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNY---VVLSNIYT 548
+QM + KP+ + ++ A + G LG+ L + N + N+Y
Sbjct: 302 KQMQVAGLKPSVGILKHLIDAYAFLGALQLGKAIHCCLIRIYGFVVCNTRLETSVLNMYV 361
Query: 549 AAGAWDNARKTRKLM 563
G+ +ARK L+
Sbjct: 362 RCGSIASARKCFDLI 376
>gi|296089801|emb|CBI39620.3| unnamed protein product [Vitis vinifera]
Length = 591
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 168/488 (34%), Positives = 266/488 (54%), Gaps = 7/488 (1%)
Query: 94 RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMI 153
+ ++ MI+GY +A +VF M+ + N FT SS L+AC M+ L GR++
Sbjct: 56 KGLIGEALMIAGYTSCNNHTHAWMVFCEMMNEELDPNAFTISSVLKACKGMKCLSYGRLV 115
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGW-IEDAWILFERIERKDVVSWNAMIGGLAMQGF 212
G K ++V +AL+D+YA C ++DA ++F I K+ VSW +I G +
Sbjct: 116 HGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACMVFRGIHLKNEVSWTTLIAGYTHRDD 175
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGLESSNKLT 270
+FR M+ + ++ + F+ +RA S+G + Q+H + K G ES+ +
Sbjct: 176 GYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGE--QLHAAVTKHGFESNLPVM 233
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
S++D+Y + A + + M + D+I+ LI+G+ R + E+ +F M +
Sbjct: 234 NSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYERSN--PTESLYVFSMMESEGF 291
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
+ ++ CA +A LN G+QIH + + A+ NALIDMY+K G IAD+++
Sbjct: 292 SPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQ 351
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
F M ++++SWT+++ GY HGYG EA+EL+ KM G+ P+ V F+++L ACSH GL
Sbjct: 352 VFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGL 411
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
EG F M+ Y I P E + CVVDL R G++E AY +I M KP +W L
Sbjct: 412 VDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMPFKPDECVWGPFL 471
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
GAC + +LG+LAA + D+ P + YV+LSNIY A G W + RKLM+ +K
Sbjct: 472 GACKAHTFPNLGKLAAHRILDLRPHMAGTYVMLSNIYAADGKWGEFARLRKLMKRMGNKK 531
Query: 571 NPGYSFLQ 578
G S+++
Sbjct: 532 ETGRSWVE 539
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 194/393 (49%), Gaps = 7/393 (1%)
Query: 28 LDPSTYM--SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVL-SA 84
LDP+ + S+L+ C K L+H I +G + +++ ++ YA + A
Sbjct: 89 LDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDA 148
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
F + +N VSWT +I+GY L VF ML V N F++S A+RAC +
Sbjct: 149 CMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSI 208
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
G + ++ K F NL V +++LD+Y +C +A F + ++D+++WN +I
Sbjct: 209 GSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLI 268
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G +S ++F M +G P+CFT SI+ A L QIH II+ GL+
Sbjct: 269 AGYERSN-PTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLD 327
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ L+ +LID+Y+K G+I ++Q++ M + D++S TA++ G+ + +EA +LF
Sbjct: 328 GNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGT-HGYGEEAVELFDK 386
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
M+ + D V+ +L+ C++ ++ G R Y S D + ++D+ ++G
Sbjct: 387 MVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAG 446
Query: 384 EIADANRAFDEMGDK-NVISWTSLIAGYAKHGY 415
++ +A + M K + W + H +
Sbjct: 447 KVEEAYELIESMPFKPDECVWGPFLGACKAHTF 479
>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Glycine max]
Length = 586
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 151/448 (33%), Positives = 268/448 (59%), Gaps = 4/448 (0%)
Query: 138 LRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDV 197
L C++ R L G+ + G ++K F V ++++D+Y+KCG + +A +F + ++V
Sbjct: 11 LNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVRNV 70
Query: 198 VSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDL 257
+SWNAMI G + +++ LFR M +G PD +T S L+A + QIH
Sbjct: 71 ISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIHAA 130
Query: 258 IIKLGLE--SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHS 315
+I+ G + + + G+L+D+Y K + A +++ + + ++S + LI G+A++DN
Sbjct: 131 LIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDN-L 189
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSY-DAAVGNA 374
KEA DLF+++ + +D +L ++ + A+ A L G+Q+HA+ K + +V N+
Sbjct: 190 KEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSVANS 249
Query: 375 LIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
++DMY K G +A+ F EM ++NV+SWT +I GY KHG G++A+EL+ +M+ G+ P+
Sbjct: 250 VLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIEPD 309
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI 494
VT+L++L ACSH+GL EG + F+ + + +I P+ EH++C+VDL R G+L+ A N+I
Sbjct: 310 SVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRLKEAKNLI 369
Query: 495 RQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWD 554
+M +KP +W +L C ++G+ +G+ L E NYV++SN+Y AG W
Sbjct: 370 EKMPLKPNVGIWQTLLSVCRMHGDVEMGKQVGEILLRREGNNPANYVMVSNMYAHAGYWK 429
Query: 555 NARKTRKLMEERSLRKNPGYSFLQSSKK 582
+ K R+ ++ + L+K G S+++ K+
Sbjct: 430 ESEKIRETLKRKGLKKEAGRSWVEMDKE 457
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 121/424 (28%), Positives = 207/424 (48%), Gaps = 17/424 (4%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
+L C ++ Q +H + G++ + +I Y+K G V A + F+ +P RN
Sbjct: 10 ILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVRN 69
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG 155
V+SW AMI+GY E AL +F M G + +TYSS+L+AC+ G I
Sbjct: 70 VISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIHA 129
Query: 156 SIQKGRF--VENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN 213
++ + F + V AL+DLY KC + +A +F+RIE K V+SW+ +I G A +
Sbjct: 130 ALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDNL 189
Query: 214 DDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG---LESSNKLT 270
++ LFR + + D F L SI+ L + Q+H IK+ LE S +
Sbjct: 190 KEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMS--VA 247
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
S++D+Y K G A L+R ML+ +++S T +I+G+ + +K A +LF +M +
Sbjct: 248 NSVLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNK-AVELFNEMQENGI 306
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNA-LIDMYAKSGEIADAN 389
D V +L+ C++ + G++ + Q A ++D+ + G + +A
Sbjct: 307 EPDSVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRLKEAK 366
Query: 390 RAFDEMGDK-NVISWTSLIAGYAKHG---YGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
++M K NV W +L++ HG G + E+ ++ EG P + +S ++A
Sbjct: 367 NLIEKMPLKPNVGIWQTLLSVCRMHGDVEMGKQVGEIL--LRREGNNPANYVMVSNMYA- 423
Query: 446 SHTG 449
H G
Sbjct: 424 -HAG 426
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 163/358 (45%), Gaps = 38/358 (10%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNG--YESNLHLSTKVIIFYAKVGDVLSARK 86
D TY S L+ C A + IHA +I +G Y + ++ ++ Y K + ARK
Sbjct: 104 DGYTYSSSLKACSCADAAGEGMQIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARK 163
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FDR+ E++V+SW+ +I GYAQ + A+ +F + S R + F SS + A
Sbjct: 164 VFDRIEEKSVMSWSTLILGYAQEDNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFAL 223
Query: 147 LQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
L+ G+ + +I+ + + V +++LD+Y KCG +A LF + ++VVSW MI
Sbjct: 224 LEQGKQMHAYTIKVPYGLLEMSVANSVLDMYMKCGLTVEADALFREMLERNVVSWTVMIT 283
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
G G + + LF M G++PD T ++L A H +IK G
Sbjct: 284 GYGKHGIGNKAVELFNEMQENGIEPDSVTYLAVLSACS-----------HSGLIKEG--- 329
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
KY SI + Q + K + +C + G KEA +L + M
Sbjct: 330 ------------KKYFSILCSNQKIKP--KVEHYACMVDLLGRG---GRLKEAKNLIEKM 372
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
LK + I +L++C + +G+Q+ + + + + A + +MYA +G
Sbjct: 373 PLKP---NVGIWQTLLSVCRMHGDVEMGKQVGEILLRREGN-NPANYVMVSNMYAHAG 426
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 97/177 (54%), Gaps = 1/177 (0%)
Query: 336 ILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEM 395
+L +LN C+ L+ G+Q+H K VGN++IDMY+K G + +A R F+ +
Sbjct: 6 LLNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTL 65
Query: 396 GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGW 455
+NVISW ++IAGY G EA+ L+++M+ +G VP+ T+ S L ACS EG
Sbjct: 66 PVRNVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGM 125
Query: 456 ELFTDMI-NKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
++ +I + + L ++ +VDL+ + ++ A + ++ K S + ILG
Sbjct: 126 QIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILG 182
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 165/552 (29%), Positives = 297/552 (53%), Gaps = 4/552 (0%)
Query: 30 PSTYMSLLQFCIDKKAERQAHLIHAHII--TNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
P + LL+ D K + IH+H+I + E+++ +I FYAKV V A
Sbjct: 29 PLDLIKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNL 88
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG-VRANQFTYSSALRACARMRW 146
FDRMPERNVVSW+A+++GY NG+ + + M+ G V N++ + A+ +C
Sbjct: 89 FDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGR 148
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
++ GR G + K F + +V++AL+ +Y+KC ++DA ++ + D+V++N+++
Sbjct: 149 VEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSS 208
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
L G+ + + RSM+ + +K D T + +L +H ++ +E
Sbjct: 209 LVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECD 268
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
++ ++I++Y K G A ++ + +++ TA+++ ++ +EA +LF M
Sbjct: 269 AYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCF-EEALNLFSKME 327
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ + ++ ++LN CA +++ G +H + K + VGNALI+MYAKSG+I
Sbjct: 328 QENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIE 387
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A + F +M +++I+W ++I G++ HG G +A+ +++ M PN VTF +L AC
Sbjct: 388 AAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACG 447
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
H GL EG+ ++ ++ + P EH++C+V L ++ GQL A N +R +K W
Sbjct: 448 HLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAW 507
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
+L AC ++ N LG A + +M+P Y +LSNIY WD K RKLM ++
Sbjct: 508 RTLLNACHVHQNYGLGRWVAEFVLEMDPNDVGTYTLLSNIYAKEKRWDGVVKVRKLMRDK 567
Query: 567 SLRKNPGYSFLQ 578
++K PG S+++
Sbjct: 568 KIKKEPGVSWIE 579
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 166/318 (52%), Gaps = 6/318 (1%)
Query: 2 NIVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
+I+ + + G L++ L+ S+ D T+++ C K R +H ++T+
Sbjct: 204 SILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTS 263
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
E + ++S+ +I Y K G L AR FD + RNVV WTA+++ QNG E AL +F
Sbjct: 264 DVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLF 323
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
S M + V++N+FTY+ L ACA + + G ++ G +K F ++ V +AL+++YAK
Sbjct: 324 SKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKS 383
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G IE A +F + +D+++WNAMI G + G + +F+ M+ P+ T +L
Sbjct: 384 GDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVL 443
Query: 240 RASVGGIELMK--ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKT 296
A G + L++ +H L+ + G++ + ++ + +K G + A R+ +K
Sbjct: 444 SA-CGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKW 502
Query: 297 DIISCTALISGFARDDNH 314
D+++ L++ N+
Sbjct: 503 DVVAWRTLLNACHVHQNY 520
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 145/394 (36%), Positives = 246/394 (62%), Gaps = 1/394 (0%)
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG 244
A+ +F I +V +WN +I G A +F +R M+ ++PD T +L+A
Sbjct: 71 AYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISK 130
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
+ + + IH + I+ G ES + SL+ +YA G SAY+++ M + D+++ ++
Sbjct: 131 SLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSM 190
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
I+GFA + EA LF++M ++ + D + +L+ A + +L LGR++H + K
Sbjct: 191 INGFALN-GRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVG 249
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
S ++ V N+L+D+YAK G I +A R F EM ++N +SWTSLI G A +G+G EA+EL+K
Sbjct: 250 LSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFK 309
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
+M+ +G+VP+++TF+ +L+ACSH G+ EG+E F M + I+PR EH+ C+VDL +R
Sbjct: 310 EMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRA 369
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLS 544
G ++ AY I+ M ++P A +W +LGAC+I+G+ LGE+A +L ++EP+ S +YV+LS
Sbjct: 370 GLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLS 429
Query: 545 NIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
N+Y + W + + R+ M + ++K PGYS ++
Sbjct: 430 NLYASERRWSDVQVIRRSMLKDGVKKTPGYSLVE 463
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 213/410 (51%), Gaps = 27/410 (6%)
Query: 19 FSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYE-SNLHLSTKVIIFYAK 77
F + P+ L + +SLLQFC K + + IHA I +G +N + +I
Sbjct: 8 FVSTTPENPL--TKCISLLQFCASSKHKLKQ--IHAFSIRHGVSLNNPDMGKHLIFTIVS 63
Query: 78 VGDVLS-ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSS 136
+ +S A F + NV +W +I GYA++ A L + M+ S V + TY
Sbjct: 64 LSAPMSYAYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPF 123
Query: 137 ALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKD 196
L+A ++ ++ G I + F +FV+++LL +YA CG E A+ +FE ++ +D
Sbjct: 124 LLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERD 183
Query: 197 VVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS--VGGIELMKISQI 254
+V+WN+MI G A+ G +++ LFR M +G++PD FT+ S+L AS +G +EL + ++
Sbjct: 184 LVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGR--RV 241
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH 314
H ++K+GL ++ +T SL+D+YAK G+IR A +++ M + + +S T+LI G A +
Sbjct: 242 HVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAV-NGF 300
Query: 315 SKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG-- 372
+EA +LFK+M + + ++ +L C++ L+ G F+Y G
Sbjct: 301 GEEALELFKEMEGQGLVPSEITFVGVLYACSHCGMLDEG-------FEYFRRMKEECGII 353
Query: 373 ------NALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHGY 415
++D+ +++G + A M N + W +L+ HG+
Sbjct: 354 PRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGH 403
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 115/239 (48%), Gaps = 15/239 (6%)
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSYDAA-VGNALI-DMYAKSGEIADANRAFDEMGD 397
+L CA +S + +QIHAF+ ++ S + +G LI + + S ++ A F + +
Sbjct: 23 LLQFCA--SSKHKLKQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIHN 80
Query: 398 KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWEL 457
NV +W ++I GYA+ A Y++M + P+ T+ LL A S + EG +
Sbjct: 81 PNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAI 140
Query: 458 FTDMI-NKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIY 516
+ I N + L + + ++ ++A G ESAY + M + + W++++ ++
Sbjct: 141 HSVTIRNGFESLVFVQ--NSLLHIYAACGDTESAYKVFELMKERDLVA-WNSMINGFALN 197
Query: 517 G--NTSLGELAARNLFDMEPEKSVNYVVLSNIYTAA--GAWDNARKTRKLMEERSLRKN 571
G N +L ++ +EP+ + V+S + +A GA + R+ + + L KN
Sbjct: 198 GRPNEALTLFREMSVEGVEPD---GFTVVSLLSASAELGALELGRRVHVYLLKVGLSKN 253
>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
Length = 810
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 169/491 (34%), Positives = 268/491 (54%), Gaps = 37/491 (7%)
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG--VRANQFTYSSALRACARMR 145
D P+R V + ++ G +ALL+F++M G + +TY AL++CA
Sbjct: 77 LDASPDRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAATD 136
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
L GR I S + N+FV + + +YA+CG +DA+ +FE ++ +DVVSWNAMI
Sbjct: 137 GLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMIS 196
Query: 206 GLAMQGFNDDSFWLFRSMMR-QGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G A G + +FR ++ Q KPD T+ SIL + M +++ D+ + G+
Sbjct: 197 GFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPS-------MGKARVEDIALLKGVF 249
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ G +IS A+++ + ++ H EA +LF
Sbjct: 250 DEMRFKG--------------------------LISWNAMLAVYTNNEMHV-EAVELFMR 282
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M + D V L +L C V++L+LG++IH + + + NAL+DMYA G
Sbjct: 283 MQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGC 342
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ +A FD MG ++V+SWTS+I+ Y +HG+G EAI+L++KM +G+ P+ + F+++L A
Sbjct: 343 LKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAA 402
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
CSH GL G F M +++ I P+ EH++C+VDL R G + AY+ I M IKP
Sbjct: 403 CSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNER 462
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
+W A+LGAC I+ N +G LAA +L + P+++ YV+LSNIY AG W + R +ME
Sbjct: 463 VWGALLGACRIHSNMDIGLLAADSLLRLAPKQTGYYVLLSNIYARAGRWADVSMVRSVME 522
Query: 565 ERSLRKNPGYS 575
+ ++K PG S
Sbjct: 523 SKGIKKLPGVS 533
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 170/364 (46%), Gaps = 40/364 (10%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY L+ C IH+ G + N+ ++ I YA+ G A + F
Sbjct: 121 DHYTYPLALKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMF 180
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ M R+VVSW AMISG+A G A+ VF ++ AL+ C +
Sbjct: 181 EEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELV-------------ALQ-CPKP---D 223
Query: 149 GGRM--IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
G M I S+ K R + +K +F+ + K ++SWNAM+
Sbjct: 224 AGTMASILPSMGKARVEDIALLKG-----------------VFDEMRFKGLISWNAMLAV 266
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLES 265
+ ++ LF M + G++PD TL ++L S G + + + + IH++I + + S
Sbjct: 267 YTNNEMHVEAVELFMRMQKDGIEPDAVTLATVL-PSCGEVSALSLGKRIHEVIKRRRMCS 325
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
S L +L+D+YA G ++ A ++ SM D++S T++IS + R H +EA DLF+ M
Sbjct: 326 SMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGR-HGHGREAIDLFEKM 384
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQ-IHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
+ + D + +L C++ L++G+ ++ ++ + ++D+ ++G
Sbjct: 385 CGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGC 444
Query: 385 IADA 388
I +A
Sbjct: 445 IREA 448
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 4/204 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T ++L C + A IH I S++ L ++ YA G + AR F
Sbjct: 291 DAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVF 350
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D M R+VVSWT++IS Y ++G+ A+ +F M G+ + + + L AC+ L
Sbjct: 351 DSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLD 410
Query: 149 GGRMIQGSI-QKGRFVENLFVKSALLDLYAKCGWIEDAW--ILFERIERKDVVSWNAMIG 205
G+ S+ + L + ++DL + G I +A+ I+ I+ + V W A++G
Sbjct: 411 MGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERV-WGALLG 469
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMK 229
+ D S++R K
Sbjct: 470 ACRIHSNMDIGLLAADSLLRLAPK 493
>gi|449482847|ref|XP_004156421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 833
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 177/527 (33%), Positives = 288/527 (54%), Gaps = 45/527 (8%)
Query: 95 NVVSW-TAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMI 153
++ SW T++IS + +N + +N S S N S L C R L G +
Sbjct: 13 HLPSWVTSLISPF-RNQFHQNPFPETS----STFVLNHLDPSFLLSICGREGNLHLGSSL 67
Query: 154 QGSIQKGRFVENLF----VKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG--- 206
SI K + N + + ++L+ +Y +CG + DA +F+ + +D +SWNA+IGG
Sbjct: 68 HASIIKSFELSNHYNGVVIMNSLISMYDRCGKLPDAVKVFDEMVTRDTISWNALIGGFVR 127
Query: 207 ------------------------------LAMQGFNDDSFWLFRSMMRQG-MKPDCFTL 235
LA G+++ S LF+ MM G ++P+ T
Sbjct: 128 NGKFFAGLGMQVFYEMGERNVITWTAVISGLAQNGYHEHSLKLFKEMMSYGSVEPNSLTY 187
Query: 236 GSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLK 295
S+L A G L + QIH LI+KLG++S + +L+D+Y+K G I A++++ +
Sbjct: 188 LSLLTACSGLEALKEGCQIHGLIMKLGIQSDLCIGSALMDMYSKSGRIGEAWKIFELAEE 247
Query: 296 TDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQ 355
D++S T +++GF + +EA +F M+ + ID ++ ++L + SL LG+Q
Sbjct: 248 LDMVSLTVILAGFTHN-GCEEEAIQIFLKMLKMGIEIDGNVVSVVLGVFGADTSLRLGQQ 306
Query: 356 IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGY 415
+H+F K + V N LI+MY+K G + ++ + FD M ++N ++W S+IA +A+HG
Sbjct: 307 VHSFVVKRNFICNPFVSNGLINMYSKCGALDESMKVFDRMRERNSVTWNSMIAAFARHGD 366
Query: 416 GHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFS 475
+A++LY+ M+ EG P DVTFLSLL ACSH GL +G E M + + PR+EH +
Sbjct: 367 ALKALQLYEDMQLEGAKPTDVTFLSLLHACSHAGLVKKGMEFLKSMTKDHGMNPRSEHHA 426
Query: 476 CVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPE 535
CVVD+ R G L A N I ++ +P +W A+LGACS+YG++ +G+ AA +LF P+
Sbjct: 427 CVVDMLGRAGMLSEARNFIEKLPEQPGLLVWQALLGACSLYGDSKIGKYAAEHLFSETPD 486
Query: 536 KSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
V YV+L+NIY++ G W +T + M+E K G S+++ KK
Sbjct: 487 SPVPYVLLANIYSSEGNWKERARTIRKMKEVGTAKETGISWIEIDKK 533
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 141/275 (51%), Gaps = 5/275 (1%)
Query: 13 LKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVI 72
K+ + + P++L TY+SLL C +A ++ IH I+ G +S+L + + ++
Sbjct: 171 FKEMMSYGSVEPNSL----TYLSLLTACSGLEALKEGCQIHGLIMKLGIQSDLCIGSALM 226
Query: 73 IFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQF 132
Y+K G + A K F+ E ++VS T +++G+ NG +E A+ +F ML+ G+ +
Sbjct: 227 DMYSKSGRIGEAWKIFELAEELDMVSLTVILAGFTHNGCEEEAIQIFLKMLKMGIEIDGN 286
Query: 133 TYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI 192
S L L+ G+ + + K F+ N FV + L+++Y+KCG ++++ +F+R+
Sbjct: 287 VVSVVLGVFGADTSLRLGQQVHSFVVKRNFICNPFVSNGLINMYSKCGALDESMKVFDRM 346
Query: 193 ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKI 251
++ V+WN+MI A G + L+ M +G KP T S+L A S G+ +
Sbjct: 347 RERNSVTWNSMIAAFARHGDALKALQLYEDMQLEGAKPTDVTFLSLLHACSHAGLVKKGM 406
Query: 252 SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSA 286
+ + G+ ++ ++D+ + G + A
Sbjct: 407 EFLKSMTKDHGMNPRSEHHACVVDMLGRAGMLSEA 441
>gi|449443327|ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
gi|449521082|ref|XP_004167560.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
Length = 583
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 292/545 (53%), Gaps = 11/545 (2%)
Query: 42 DKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNV----V 97
D K R IHA ++T+G + +++KV+ F+A V A D + + N
Sbjct: 14 DCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANF--VEYGDYACDYLEQGNTRLGSF 71
Query: 98 SWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSI 157
+ ++I+GY + + A+ V+ M+R G + FT+ L+AC+ + GR + G +
Sbjct: 72 PFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQVHGVV 131
Query: 158 QKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSF 217
K + + +V+++L+ Y CG A +F+ + +DVVSWN++I G G D++
Sbjct: 132 VKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDEAI 191
Query: 218 WLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVY 277
+F R ++P TL S+L A +L IH +I+ + + L +++D+Y
Sbjct: 192 SVF---FRMDVEPSMTTLVSVLAACARNGDLCTGKGIHG-VIERRFKVNLVLGNAMLDMY 247
Query: 278 AKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVIL 337
K G A ++ + DI+S T +I+G + D H K++ +LF M + D +IL
Sbjct: 248 VKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSD-HPKQSLELFSMMRTLGISPDAIIL 306
Query: 338 CLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD 397
+L+ CA++ +L+ G +H + + +D +G A++DMYAK G I A + F M
Sbjct: 307 TSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQ 366
Query: 398 KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWEL 457
+N +W +L+ G A HG HEA+ L++ M G+ PN++TFL++L AC H GL EG +
Sbjct: 367 RNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCGLVDEGRKY 426
Query: 458 FTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
F +M Y +LP+ EH+ C++DLF R G LE A + R M +KP +W +L AC+ G
Sbjct: 427 FDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGLLLNACTTVG 486
Query: 518 NTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
N L + +++ + S +V+LSNI W N + R+LM++R +RK PG S +
Sbjct: 487 NIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKAPGSSVI 546
Query: 578 QSSKK 582
+ K
Sbjct: 547 EVDGK 551
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 192/383 (50%), Gaps = 11/383 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ LL+ C + R+ +H ++ G ++ ++ +I Y GD A K F
Sbjct: 104 DMFTFPVLLKACSNFSGSREGRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVF 163
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D M R+VVSW ++ISG+ + G+ + A+ VF R V + T S L ACAR L
Sbjct: 164 DEMLVRDVVSWNSLISGFMKAGHFDEAISVF---FRMDVEPSMTTLVSVLAACARNGDLC 220
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ I G I++ RF NL + +A+LD+Y K G +A +F+ + +D+VSW MI GL
Sbjct: 221 TGKGIHGVIER-RFKVNLVLGNAMLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLV 279
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLESS 266
S LF M G+ PD L S+L AS+G ++ + +H+ I + G++
Sbjct: 280 QSDHPKQSLELFSMMRTLGISPDAIILTSVLSACASLGTLDFG--TWVHEYINQRGIKWD 337
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ +++D+YAK G I A +++ SM + + + AL+ G A EA +LF+ MI
Sbjct: 338 IHIGTAIVDMYAKCGCIEMALKIFYSMSQRNTFTWNALLCGLAM-HGLVHEALNLFEVMI 396
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK-YQSSYDAAVGNALIDMYAKSGEI 385
+ + +++ +L C + ++ GR+ K Y +ID++ ++G +
Sbjct: 397 ISGVKPNEITFLAILTACCHCGLVDEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLL 456
Query: 386 ADANRAFDEMGDK-NVISWTSLI 407
+A M K +V+ W L+
Sbjct: 457 EEAVELARTMPMKPDVLIWGLLL 479
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 97/217 (44%), Gaps = 32/217 (14%)
Query: 339 LMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK 398
++L+ + +L + RQIHA YD V + +++ +A E D + E G+
Sbjct: 7 VLLDSIKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDYLEQGNT 66
Query: 399 NVIS--WTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWE 456
+ S + SLI GY + A+ +Y++M +G VP+ TF LL ACS+ + EG +
Sbjct: 67 RLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQ 126
Query: 457 LFTDMI------NKY------RILPRAEHFSC------------------VVDLFARRGQ 486
+ ++ + Y R FSC ++ F + G
Sbjct: 127 VHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGH 186
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGE 523
+ A ++ +M+++P+ + ++L AC+ G+ G+
Sbjct: 187 FDEAISVFFRMDVEPSMTTLVSVLAACARNGDLCTGK 223
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 159/457 (34%), Positives = 258/457 (56%), Gaps = 6/457 (1%)
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
G+ A+ TYS ++ C R + G +I + +F+ + L+++Y K + DA
Sbjct: 8 GLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLNDA 67
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGG 245
LF+++ +++V+SW MI + + + L M+R G++P+ +T S+LRA G
Sbjct: 68 HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACNG- 126
Query: 246 IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALI 305
+ + +H IIK GLES + +LIDV+AK G A ++ M+ D I ++I
Sbjct: 127 --MSDVRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSII 184
Query: 306 SGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS 365
GFA++ + S A +LFK M + L +L C +A L LG Q H KY
Sbjct: 185 GGFAQN-SRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQ 243
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKK 425
D + NAL+DMY K G + DA R F++M +++VI+W+++I+G A++GY EA++L++
Sbjct: 244 --DLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFEL 301
Query: 426 MKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRG 485
MK G PN +T + +LFACSH GL +GW F M Y I P EH+ C++DL + G
Sbjct: 302 MKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAG 361
Query: 486 QLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSN 545
+L+ A ++ +M +P A W +LGAC + N L E AA+ + ++PE + Y VLSN
Sbjct: 362 KLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTVLSN 421
Query: 546 IYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
IY + WD+ + RK M + ++K PG S+++ +K+
Sbjct: 422 IYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQ 458
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 127/387 (32%), Positives = 210/387 (54%), Gaps = 16/387 (4%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D +TY L++ C+ +A + +LI H+ NG++ + L +I Y K + A + F
Sbjct: 12 DSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLNDAHQLF 71
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D+MP+RNV+SWT MIS Y++ + AL + MLR GVR N +TYSS LRAC M +
Sbjct: 72 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACNGMSDV- 130
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
RM+ I K +++V+SAL+D++AK G EDA +F+ + D + WN++IGG A
Sbjct: 131 --RMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 188
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
+D + LF+ M R G + TL S+LRA G L Q H I+K +
Sbjct: 189 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLI 246
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
L +L+D+Y K GS+ A +++ M + D+I+ + +ISG A+ + +S+EA LF+ M
Sbjct: 247 LNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQ-NGYSQEALKLFELMKSS 305
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFK-YQSSYDAAVG----NALIDMYAKSG 383
+ + + +L C++ L G + F+ + Y G +ID+ K+G
Sbjct: 306 GTKPNYITIVGVLFACSHAGLLEDG----WYYFRSMKKLYGINPGREHYGCMIDLLGKAG 361
Query: 384 EIADANRAFDEMG-DKNVISWTSLIAG 409
++ DA + +EM + + ++W +L+
Sbjct: 362 KLDDAVKLLNEMECEPDAVTWRTLLGA 388
>gi|147807930|emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
Length = 585
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 180/553 (32%), Positives = 300/553 (54%), Gaps = 26/553 (4%)
Query: 34 MSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVI-IFYAKVGDVLSARKAFDRMP 92
+SLLQ K Q IHA +IT S+ +++++ +K +V A F ++
Sbjct: 15 LSLLQX---SKTSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIH 71
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
+ N M+ Y ++ E AL ++ M + G+ + +TY L+AC M L G +
Sbjct: 72 QPNSFICNTMVKCYTESSTPERALRFYAEMRKKGLLGDNYTYPFVLKACGAMCGLLEGGL 131
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF 212
+QG K F ++FV + L+ +Y +CG A +F+ KD+VSWN+M+GG G
Sbjct: 132 VQGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGE 191
Query: 213 NDDSFWLF-----RSMMRQGMKPDCF--TLGSILRASVGGIELMKISQIHDLIIKLGLES 265
+++ +F R ++ + D + +G + RA V D + L S
Sbjct: 192 MENAQNMFDEMPERDVVSWSIMIDGYGKKMGEVNRARV----------FFDSMPTRDLVS 241
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
N S+ID YAK G + A +++ ML+ ++IS + +I G+A + SKEA +LF+ M
Sbjct: 242 WN----SMIDGYAKVGEMEVAREIFBKMLQKNVISWSIMIDGYAXHRD-SKEALNLFRQM 296
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ + + D V + ++ C+ + +L+ GR IH + + + D V AL+DMY K G
Sbjct: 297 LCQGIKPDRVSVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSX 356
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
+A F+ M ++NV+SW +I G +G+G EA+E + +M+ E + +D+ FL +L AC
Sbjct: 357 DEARXIFNSMPERNVVSWNVMIVGLGMNGFGKEALECFXQMEMERIPMDDLLFLGVLMAC 416
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
SH L EG +F M YR+ P+ EH+ C+VDL R GQL+ N+I+ M +KP A+L
Sbjct: 417 SHANLVTEGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAAL 476
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
W ++L AC I+ N +L E+ L +++ + S YV++SNIY G W+ + RKLM+E
Sbjct: 477 WGSLLLACRIHQNVTLAEIVVERLAELKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKE 536
Query: 566 RSLRKNPGYSFLQ 578
R ++K+ G S ++
Sbjct: 537 RKMKKDIGRSVIE 549
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 196/432 (45%), Gaps = 44/432 (10%)
Query: 2 NIVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
+V+ ++ ++AL+F + L D TY +L+ C + L+ +
Sbjct: 80 TMVKCYTESSTPERALRFYAEMRKKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEAVKR 139
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G+ ++ + +I Y + G+ AR FD E+++VSW +M+ GY G ENA +F
Sbjct: 140 GFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMF 199
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRF------VENLFVKSALL 173
M V ++S + G +M G + + R +L ++++
Sbjct: 200 DEMPERDV----VSWSIMIDG-------YGKKM--GEVNRARVFFDSMPTRDLVSWNSMI 246
Query: 174 DLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD-- 231
D YAK G +E A +F+++ +K+V+SW+ MI G A + ++ LFR M+ QG+KPD
Sbjct: 247 DGYAKVGEMEVAREIFBKMLQKNVISWSIMIDGYAXHRDSKEALNLFRQMLCQGIKPDRV 306
Query: 232 --------CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
C LG++ + + + + + D++++ +L+D+Y K GS
Sbjct: 307 SVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQT----------ALVDMYLKCGSX 356
Query: 284 RSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNI 343
A ++ SM + +++S +I G + KEA + F M ++++ +DD++ +L
Sbjct: 357 DEARXIFNSMPERNVVSWNVMIVGLGM-NGFGKEALECFXQMEMERIPMDDLLFLGVLMA 415
Query: 344 CANVASLNLGRQI-HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK-NVI 401
C++ + G I + Y+ L+D+ ++G++ M K N
Sbjct: 416 CSHANLVTEGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAA 475
Query: 402 SWTSLIAGYAKH 413
W SL+ H
Sbjct: 476 LWGSLLLACRIH 487
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 175/534 (32%), Positives = 281/534 (52%), Gaps = 33/534 (6%)
Query: 81 VLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS-GVRANQFTYSSALR 139
V + F MPER+ VS+ A+I+G++ G ++ ++ A+LR VR + T S+ +
Sbjct: 95 VPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIM 154
Query: 140 ACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVV- 198
+ + G + + + F FV S L+D+YAK G I DA +F+ +E K VV
Sbjct: 155 VASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVM 214
Query: 199 ------------------------------SWNAMIGGLAMQGFNDDSFWLFRSMMRQGM 228
+W M+ GL G ++ +FR M +G+
Sbjct: 215 YNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGV 274
Query: 229 KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQ 288
D +T GSIL A + QIH I + E + + +L+D+Y+K SIR A
Sbjct: 275 GIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEA 334
Query: 289 LYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
++R M +IIS TA+I G+ ++ S+EA F +M + + DD L +++ CAN+A
Sbjct: 335 VFRRMTCRNIISWTAMIVGYGQNAC-SEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLA 393
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA 408
SL G Q H A V NAL+ +Y K G I DA+R FDEM + +SWT+L+
Sbjct: 394 SLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVT 453
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
GYA+ G E I+L++KM G+ P+ VTF+ +L ACS GL +G + F M + I+
Sbjct: 454 GYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIV 513
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARN 528
P +H++C++DL++R G+ + A I+QM P A W+ +L +C + GN +G+ AA N
Sbjct: 514 PIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAEN 573
Query: 529 LFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
L + +P+ +YV+L +++ A G W R+ M +R ++K PG S+++ K
Sbjct: 574 LLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNK 627
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 193/396 (48%), Gaps = 40/396 (10%)
Query: 49 AHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP---------------- 92
H +H ++ G+ + + + ++ YAK+G + AR+ F M
Sbjct: 165 GHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLR 224
Query: 93 ---------------ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSA 137
+R+ ++WT M++G QNG AL VF M GV +Q+T+ S
Sbjct: 225 CKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSI 284
Query: 138 LRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDV 197
L AC + + G+ I I + + +N+FV SAL+D+Y+KC I A +F R+ +++
Sbjct: 285 LTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNI 344
Query: 198 VSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDL 257
+SW AMI G ++++ F M G+KPD FTLGS++ + L + +Q H L
Sbjct: 345 ISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCL 404
Query: 258 IIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKE 317
+ GL ++ +L+ +Y K GSI A++L+ M D +S TAL++G+A+ +KE
Sbjct: 405 ALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQ-FGKAKE 463
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN---- 373
DLF+ M++ + D V +L+ C+ + G + Q +D +
Sbjct: 464 TIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCD---YFDSMQKDHDIVPIDDHYT 520
Query: 374 ALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIA 408
+ID+Y++SG +A +M + W +L++
Sbjct: 521 CMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLS 556
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 186/389 (47%), Gaps = 41/389 (10%)
Query: 165 NLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMM 224
NLF ++ALL A + D LF + +D VS+NA+I G + G S L+R+++
Sbjct: 78 NLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALL 137
Query: 225 R-QGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSI 283
R + ++P TL +++ + + +H +++LG + + L+D+YAK G I
Sbjct: 138 REESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLI 197
Query: 284 RSAYQLYRSMLKTDIISCTALISGFAR------------------------------DDN 313
R A ++++ M ++ LI+G R +
Sbjct: 198 RDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNG 257
Query: 314 HSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN 373
EA D+F+ M + +GID +L C +A+ G+QIHA+ + + VG+
Sbjct: 258 LQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGS 317
Query: 374 ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP 433
AL+DMY+K I A F M +N+ISWT++I GY ++ EA+ + +M+ +G+ P
Sbjct: 318 ALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKP 377
Query: 434 NDVTFLSLLFACSHTGLTCEGWEL----FTDMINKYRILPRAEHFSCVVDLFARRGQLES 489
+D T S++ +C++ EG + + +Y + A +V L+ + G +E
Sbjct: 378 DDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNA-----LVTLYGKCGSIED 432
Query: 490 AYNMIRQMNIKPTASLWSAILGACSIYGN 518
A+ + +M+ S W+A++ + +G
Sbjct: 433 AHRLFDEMSFHDQVS-WTALVTGYAQFGK 460
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 134/273 (49%), Gaps = 13/273 (4%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D T+ S+L C A + IHA+I YE N+ + + ++ Y+K + A
Sbjct: 276 IDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAV 335
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F RM RN++SWTAMI GY QN E A+ FS M G++ + FT S + +CA + L
Sbjct: 336 FRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASL 395
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G + + V +AL+ LY KCG IEDA LF+ + D VSW A++ G
Sbjct: 396 EEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGY 455
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS--VGGIE-----LMKISQIHDLIIK 260
A G ++ LF M+ G+KPD T +L A G +E + + HD++
Sbjct: 456 AQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIV-- 513
Query: 261 LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ +ID+Y++ G + A + + M
Sbjct: 514 ----PIDDHYTCMIDLYSRSGRFKEAEEFIKQM 542
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 151/336 (44%), Gaps = 42/336 (12%)
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
P F L +L A L + ++ D + L + N L +L A + +L
Sbjct: 46 PPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSAL----AHSRLVPDMERL 101
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK-MGIDDVILCLMLNICANVA 348
+ SM + D +S ALI+GF+ + ++ + L++ ++ ++ + + L M+ + + ++
Sbjct: 102 FASMPERDAVSYNALITGFSSTGSPAR-SVQLYRALLREESVRPTRITLSAMIMVASALS 160
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG------------ 396
LG +H + A VG+ L+DMYAK G I DA R F EM
Sbjct: 161 DRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLIT 220
Query: 397 -------------------DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVT 437
D++ I+WT+++ G ++G EA++++++M+ EG+ + T
Sbjct: 221 GLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYT 280
Query: 438 FLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
F S+L AC + EG ++ I + S +VD++++ + A + R+M
Sbjct: 281 FGSILTACGALAASEEGKQIHA-YITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRM 339
Query: 498 NIKPTASLWSAILGACSIYGNTSLGELAARNLFDME 533
+ S + I+G YG + E A R +M+
Sbjct: 340 TCRNIISWTAMIVG----YGQNACSEEAVRAFSEMQ 371
>gi|297843412|ref|XP_002889587.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335429|gb|EFH65846.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 558
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 178/547 (32%), Positives = 295/547 (53%), Gaps = 8/547 (1%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP-- 92
+LL K +HA +I +G++ + L + + Y + + A +FDR+P
Sbjct: 9 ALLSILSQTKTLHHTQQVHAKVIIHGFQDEVVLGSSLTNAYIQSNRLDFATASFDRIPCW 68
Query: 93 ERNVVSWTAMISGYAQNG--YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+RN SW ++SGY+++ Y + LL+++ M R + F A++AC + L+ G
Sbjct: 69 KRNRHSWNTILSGYSKSKSCYYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+I G K ++ +V +L+++YA+ G +E A +F+ + ++ V W ++ G
Sbjct: 129 MLIHGLAMKNGLDKDDYVAPSLVEMYAQFGTMESAQKVFDEMPVRNSVLWGVLMKGYLKY 188
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLG-LESSNK 268
+ + F LF M G+ D TL +++A G + K + +H L I+ ++ S
Sbjct: 189 SKDSEVFRLFYLMRDTGLALDALTLICLVKA-CGNVSAGKEGKCVHGLSIRRSFIDQSGY 247
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
L S+ID+Y K + +A +L+ + ++ +++ T LISGFA+ + + EA DLF+ M+ +
Sbjct: 248 LEASIIDMYVKCRLLDNARKLFETSVERNVVMWTTLISGFAKCE-RAVEAIDLFRQMLGE 306
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ + L +L C+++ SL G+ +H + + DA + ID YA+ G I A
Sbjct: 307 SILPNHCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDTYARCGNIQMA 366
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ FD M +NVISW+S+I + +G EA++ + MK + +VPN VTF+SLL ACSH+
Sbjct: 367 RKVFDMMPKRNVISWSSMINAFGINGLFEEALDCFDNMKSQNLVPNSVTFVSLLSACSHS 426
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
G EGW+ F M Y ++P EH++C+VDL R G++ A + I M +KP AS W A
Sbjct: 427 GNVKEGWKQFESMTRDYGLVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGA 486
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L AC I+ L A L MEP++S YV+LSNIY AG W+ R M +
Sbjct: 487 LLSACRIHKEVDLAGEIAEKLLSMEPDESSVYVLLSNIYADAGMWEMVNCVRHKMGIKGY 546
Query: 569 RKNPGYS 575
RK G S
Sbjct: 547 RKPMGLS 553
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 88/180 (48%), Gaps = 2/180 (1%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L + T ++L C + R +H ++I NG E + T I YA+ G++ ARK
Sbjct: 309 LPNHCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDTYARCGNIQMARK 368
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FD MP+RNV+SW++MI+ + NG E AL F M + N T+ S L AC+
Sbjct: 369 VFDMMPKRNVISWSSMINAFGINGLFEEALDCFDNMKSQNLVPNSVTFVSLLSACSHSGN 428
Query: 147 LQGG-RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS-WNAMI 204
++ G + + + V + ++DL + G I +A + + K + S W A++
Sbjct: 429 VKEGWKQFESMTRDYGLVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALL 488
>gi|297737195|emb|CBI26396.3| unnamed protein product [Vitis vinifera]
Length = 667
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 165/545 (30%), Positives = 298/545 (54%), Gaps = 6/545 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ +L+ C + A +H+HI+ G+++++ + T ++ Y+K SAR FD+M
Sbjct: 30 TFPFVLKACAKLPSLEDATKLHSHILLTGFQAHVFVQTALVDVYSKCCCFHSARLVFDQM 89
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P +++VSW ++IS + ++ + + + + M G+ + T++ L +C+ L G
Sbjct: 90 PIKSLVSWNSIISAHCRDFHIDQSFGILKQMQLLGLELSSATFTGFLASCS----LPQGL 145
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I G I K +L + ++++ +Y + I+ A +F + +K +VSW ++GG G
Sbjct: 146 SIHGYITKLGLDLHLPLANSIMSMYIRLNQIDGALSVFYTLHQKSIVSWTIILGGYLSAG 205
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
F +F M Q + PD +++ L+ +H L++K G + + +
Sbjct: 206 DVAKVFAVFNQMRCQCVGPDSIVFVNLISCCKLSGNLLLAMLVHSLLLKSGFDHKDPIDN 265
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
L+ +YAK + SA +++ ++ + + T++ISG+A+ + EA LF ++
Sbjct: 266 LLVAMYAKCKDLVSARRVFDAVHEKSVFLWTSMISGYAQF-GYPNEALHLFNMLLRTASR 324
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
+++ L +L+ CA + SL +G +I + D V +LI M+ K G I A
Sbjct: 325 PNELTLATVLSACAEMGSLRMGEEIEQYILLNGLGSDLRVQTSLIHMFCKCGSIKKAQAL 384
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE-GMVPNDVTFLSLLFACSHTGL 450
F+ + +K++ W+++I GYA HG G EA+ L+ KM++E G+ P+ + + S+L ACSH+GL
Sbjct: 385 FERIPNKDLAVWSAMINGYAVHGMGKEALNLFHKMQNEVGIKPDAIVYTSVLLACSHSGL 444
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
+G + F M + I P +H+SC+VDL R G +E A I++M + A +W+ L
Sbjct: 445 IEDGLKYFRSMQKDFGIEPSIQHYSCLVDLLGRAGYVELALRTIQEMPVLVQARVWAPFL 504
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
AC + N LGE AA+NLFD+EP + N+V+++N+YT+ G W A K R ++ R L K
Sbjct: 505 SACYTHHNLELGEFAAKNLFDLEPRSTGNFVLMTNLYTSMGKWKEAAKARSIINARGLVK 564
Query: 571 NPGYS 575
PG+S
Sbjct: 565 EPGWS 569
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/476 (26%), Positives = 226/476 (47%), Gaps = 43/476 (9%)
Query: 125 SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIED 184
SGV ++FT+ L+ACA++ L+ + I F ++FV++AL+D+Y+KC
Sbjct: 22 SGVHGSEFTFPFVLKACAKLPSLEDATKLHSHILLTGFQAHVFVQTALVDVYSKCCCFHS 81
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG 244
A ++F+++ K +VSWN++I D SF + + M G++ T L +
Sbjct: 82 ARLVFDQMPIKSLVSWNSIISAHCRDFHIDQSFGILKQMQLLGLELSSATFTGFLASC-- 139
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
L + IH I KLGL+ L S++ +Y + I A ++ ++ + I+S T +
Sbjct: 140 --SLPQGLSIHGYITKLGLDLHLPLANSIMSMYIRLNQIDGALSVFYTLHQKSIVSWTII 197
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
+ G+ + +K F +F M + +G D ++ +++ C +L L +H+ K
Sbjct: 198 LGGYLSAGDVAK-VFAVFNQMRCQCVGPDSIVFVNLISCCKLSGNLLLAMLVHSLLLKSG 256
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
+ + N L+ MYAK ++ A R FD + +K+V WTS+I+GYA+ GY +EA+ L+
Sbjct: 257 FDHKDPIDNLLVAMYAKCKDLVSARRVFDAVHEKSVFLWTSMISGYAQFGYPNEALHLFN 316
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWE-----LFTDMINKYRILPRAEHFSC--- 476
+ PN++T ++L AC+ G G E L + + R+ H C
Sbjct: 317 MLLRTASRPNELTLATVLSACAEMGSLRMGEEIEQYILLNGLGSDLRVQTSLIHMFCKCG 376
Query: 477 ----------------------VVDLFARRGQLESAYNMIRQMN----IKPTASLWSAIL 510
+++ +A G + A N+ +M IKP A +++++L
Sbjct: 377 SIKKAQALFERIPNKDLAVWSAMINGYAVHGMGKEALNLFHKMQNEVGIKPDAIVYTSVL 436
Query: 511 GACSIYGNTSLGELAARNL---FDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
ACS G G R++ F +EP +Y L ++ AG + A +T + M
Sbjct: 437 LACSHSGLIEDGLKYFRSMQKDFGIEPSIQ-HYSCLVDLLGRAGYVELALRTIQEM 491
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 149/272 (54%), Gaps = 6/272 (2%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS 83
PD+++ +++L+ C A L+H+ ++ +G++ + ++ YAK D++S
Sbjct: 224 PDSIV----FVNLISCCKLSGNLLLAMLVHSLLLKSGFDHKDPIDNLLVAMYAKCKDLVS 279
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
AR+ FD + E++V WT+MISGYAQ GY AL +F+ +LR+ R N+ T ++ L ACA
Sbjct: 280 ARRVFDAVHEKSVFLWTSMISGYAQFGYPNEALHLFNMLLRTASRPNELTLATVLSACAE 339
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
M L+ G I+ I +L V+++L+ ++ KCG I+ A LFERI KD+ W+AM
Sbjct: 340 MGSLRMGEEIEQYILLNGLGSDLRVQTSLIHMFCKCGSIKKAQALFERIPNKDLAVWSAM 399
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQ-GMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKL 261
I G A+ G ++ LF M + G+KPD S+L A S G+ + +
Sbjct: 400 INGYAVHGMGKEALNLFHKMQNEVGIKPDAIVYTSVLLACSHSGLIEDGLKYFRSMQKDF 459
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
G+E S + L+D+ + G + A + + M
Sbjct: 460 GIEPSIQHYSCLVDLLGRAGYVELALRTIQEM 491
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 149/449 (33%), Positives = 257/449 (57%), Gaps = 2/449 (0%)
Query: 134 YSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE 193
Y+S L++C + ++ G+ + + F + + + L++LY C + A +LF+RI
Sbjct: 78 YASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIP 137
Query: 194 RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ 253
+ ++ WN +I G A G + + L+ M G+ PD FT +L+A + +
Sbjct: 138 KHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGRE 197
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN 313
IH+ +++ G E + +LID+YAK G + SA +++ +L D + ++++ ++++
Sbjct: 198 IHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQN-G 256
Query: 314 HSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN 373
H L +M+L + + L ++ A+ A+L GR++H +++ + V
Sbjct: 257 HPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKT 316
Query: 374 ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP 433
AL+DMYAK G + A F+ +G K V+SW ++I GYA HG+ EA++L+++M P
Sbjct: 317 ALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVAK-P 375
Query: 434 NDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNM 493
+ +TF+ +L ACSH GL EGW F MI Y+I P +H++C+VDL G+L+ AYN+
Sbjct: 376 DHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNL 435
Query: 494 IRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAW 553
I QM + P + +W A+L +C I+ N LGE+A L ++EP+ + NYV+LSNIY AG W
Sbjct: 436 IMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKW 495
Query: 554 DNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+ K RKLM +R L+K+ S+++ K
Sbjct: 496 EGVAKLRKLMTDRRLKKSIACSWIEVKNK 524
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 113/366 (30%), Positives = 193/366 (52%), Gaps = 5/366 (1%)
Query: 26 TLLDP--STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS 83
T L P S Y SLLQ CI +KA + +HA + G+ + ++TK++ Y + S
Sbjct: 69 TCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSS 128
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
AR FDR+P+ N+ W +I GYA NG E A+ ++ M G+ + FT+ L+ACA
Sbjct: 129 ARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAA 188
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
+ ++ GR I + + + +++FV +AL+D+YAKCG + A +F++I +D V WN+M
Sbjct: 189 LSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSM 248
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGL 263
+ + G D L M+ G++P TL + + AS L + ++H L +
Sbjct: 249 LAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEF 308
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
ES +K+ +L+D+YAK GS+R A L+ + ++S A+I+G+A H+ EA DLF+
Sbjct: 309 ESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAM-HGHATEALDLFE 367
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK-YQSSYDAAVGNALIDMYAKS 382
+M + D + +L+ C++ L G + Y+ ++D+ S
Sbjct: 368 EMN-RVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHS 426
Query: 383 GEIADA 388
G + +A
Sbjct: 427 GRLDEA 432
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 185/554 (33%), Positives = 292/554 (52%), Gaps = 49/554 (8%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITN--GYESNLHLSTKVIIFYAK--VGDVLSARKA 87
+++S LQ C K +Q IHA II ++ L +ST++ A+ D A
Sbjct: 39 SFLSTLQTCKSIKGLKQ---IHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSL 95
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDE-NALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
++ N+ + A+I G A + D L+V+ ML G+ + +T L+ACA R
Sbjct: 96 LAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRA 155
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
++ G + G K +++V + L+ +YA C I A +F+ ++D+VSW MI G
Sbjct: 156 VREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQG 215
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
GF + L+ I+R S +++
Sbjct: 216 YVKMGFAREGVGLY-----------------IIRNSNVNLDVF----------------- 241
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ +L+D+Y K G A ++++ M +++S ++ISG A+ KE+ +F+ M
Sbjct: 242 --VGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQ-KGQFKESLYMFRKM- 297
Query: 327 LKKMGI--DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
+++G+ DDV L +LN CAN+ L LG+ +HA+ + Q D +GNAL+DMYAK G
Sbjct: 298 -QRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGS 356
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
I A F M K+V S+T++I G A HG G +A++L+ +M G+ P++VTF+ +L A
Sbjct: 357 IDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTA 416
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
CSH GL EG + F DM Y + P+ EH+ C+VDL R G + A IR M I+P A
Sbjct: 417 CSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAF 476
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
+ A+LGAC I+G LGE + + +EP K YV++SNIY++A W +A K RK M+
Sbjct: 477 VLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMK 536
Query: 565 ERSLRKNPGYSFLQ 578
ER+L K PG S ++
Sbjct: 537 ERNLEKTPGCSSIE 550
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/392 (30%), Positives = 193/392 (49%), Gaps = 47/392 (11%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T +L+ C + +A R+ +H I G S++++S ++ YA + SARK F
Sbjct: 139 DNYTIPFVLKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVF 198
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D P+R++VSWT MI GY + G+ R GV
Sbjct: 199 DTSPQRDLVSWTTMIQGYVKMGF-----------AREGV--------------------- 226
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G I I+ ++FV +AL+D+Y KCG A +F+ + K+VVSWN+MI GLA
Sbjct: 227 -GLYI---IRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLA 282
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKLGLESS 266
+G +S ++FR M R G+KPD TL ++L A++G +EL K +H + + + +
Sbjct: 283 QKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGK--WVHAYLDRNQIRAD 340
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ +L+D+YAK GSI A ++++M + D+ S TA+I G A K A DLF +M
Sbjct: 341 GFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGK-ALDLFSEM- 398
Query: 327 LKKMGI--DDVILCLMLNICANVASLNLGRQ-IHAFAFKYQSSYDAAVGNALIDMYAKSG 383
KMGI D+V +L C++V + GR+ + Y ++D+ ++G
Sbjct: 399 -PKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAG 457
Query: 384 EIADANRAFDEMG-DKNVISWTSLIAGYAKHG 414
I +A M + + +L+ HG
Sbjct: 458 LINEAEEFIRNMPIEPDAFVLGALLGACKIHG 489
>gi|302763819|ref|XP_002965331.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
gi|300167564|gb|EFJ34169.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
Length = 806
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 169/506 (33%), Positives = 276/506 (54%), Gaps = 7/506 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IH I + + + + + +I Y + G + A + F MP RNVVSWT+MI+ AQ G+
Sbjct: 271 IHDKIQSEIHGTRVLVLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQTGH 330
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACA---RMRWLQGGRMIQGSIQKGRFVENLFV 168
++ +F M+ G+ N+ TY+S + A A R L GR I I + V
Sbjct: 331 YSFSVKLFDGMIAEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIV 390
Query: 169 KSALLDLYAKCGWIEDAWILFERI--ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ 226
+++L+++YA+ G + +A +F+ I K VVS+ MI A G + +FR M +
Sbjct: 391 QNSLINMYARSGLLAEAREVFDSILENSKTVVSFTTMISAYAHNGHPRQALEIFREMTAR 450
Query: 227 GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT-GSLIDVYAKYGSIRS 285
G+ P+ T ++L A V +L + IH+ +I+ GL+SS+ SL+D+YAK G +
Sbjct: 451 GVAPNEITFATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGF 510
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
A +++ +M D+++ T +I+ + N ++ A DL+ M+ + D L +L CA
Sbjct: 511 AARVFETMKTKDLVAWTTIIAANVQSGN-NRAALDLYDRMLQSGIHPDIATLSTLLVACA 569
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
N+ L +G +IH A + + DA NAL MYAK G + A R + +V +WTS
Sbjct: 570 NLGDLAMGEKIHRQALRSKLEQDAHFQNALAAMYAKCGSLEKATRLYRRCRGSDVATWTS 629
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
++A +++ G A+ELY +M+ EG+ PN+VTF+ +L +CS GL EG E F + + Y
Sbjct: 630 MLAAHSQQGLASVALELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHSITSDY 689
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
P AEHF C+VD+ R G+L A ++ M P W ++L +C ++ + +G A
Sbjct: 690 GSQPSAEHFGCMVDVLGRAGKLRDAEELLDSMPFYPDEIAWQSLLSSCKLHTDAEIGTRA 749
Query: 526 ARNLFDMEPEKSVNYVVLSNIYTAAG 551
A L +++PE + +V LS IY AAG
Sbjct: 750 AECLLELDPESTSQFVALSQIYAAAG 775
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 145/522 (27%), Positives = 261/522 (50%), Gaps = 17/522 (3%)
Query: 21 LSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGD 80
+S +T +M + C K Q IH + T G N + + ++ YA+ G
Sbjct: 142 MSVENTQPSACGFMWAIVACGRIKDLAQGRSIHYRVAT-GRGINSSIQSALVTMYAQCGR 200
Query: 81 VLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRA 140
+ A AFD E W A++S A G+ A+ +F M + + + + + AL A
Sbjct: 201 IDLAMAAFDDNRELGTAPWNAIMSALAGAGHHRRAIELFFQMEQH--QCSDRSCAIALGA 258
Query: 141 CARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSW 200
CA L+GG I IQ + V +AL+ +Y +CG +++A +F + ++VVSW
Sbjct: 259 CAAAGHLRGGIQIHDKIQSEIHGTRVLVLNALISMYVRCGKLDEALRVFADMPHRNVVSW 318
Query: 201 NAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELM-KISQIHDL 257
+MI +A G S LF M+ +G+ P+ T S++ A +G ++ + +IH
Sbjct: 319 TSMIAAVAQTGHYSFSVKLFDGMIAEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQ 378
Query: 258 IIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD--IISCTALISGFARDDNHS 315
I G+++ + SLI++YA+ G + A +++ S+L+ ++S T +IS +A + H
Sbjct: 379 ITASGIDADPIVQNSLINMYARSGLLAEAREVFDSILENSKTVVSFTTMISAYAH-NGHP 437
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ-SSYDAAVGNA 374
++A ++F++M + + +++ +L C + L G IH + S D N+
Sbjct: 438 RQALEIFREMTARGVAPNEITFATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNS 497
Query: 375 LIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
L+DMYAK G++ A R F+ M K++++WT++IA + G A++LY +M G+ P+
Sbjct: 498 LVDMYAKCGDLGFAARVFETMKTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPD 557
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF-SCVVDLFARRGQLESAYNM 493
T +LL AC++ G G ++ + L + HF + + ++A+ G LE A +
Sbjct: 558 IATLSTLLVACANLGDLAMGEKIHRQALRSK--LEQDAHFQNALAAMYAKCGSLEKATRL 615
Query: 494 IRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPE 535
R+ A+ W+++L A S G L +A +ME E
Sbjct: 616 YRRCRGSDVAT-WTSMLAAHSQQG---LASVALELYAEMESE 653
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 138/508 (27%), Positives = 243/508 (47%), Gaps = 22/508 (4%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y +LL+ C +++A +HAHI++ N L V YA+ +A FD MP
Sbjct: 53 YANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDAMP 112
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
+R W ++ + + L ++ M + + + A+ AC R++ L GR
Sbjct: 113 DRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRS 172
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGF 212
I + GR + N ++SAL+ +YA+CG I+ A F+ WNA++ LA G
Sbjct: 173 IHYRVATGRGI-NSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGH 231
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRASV----GGIELMKISQIHDLIIKLGLESSNK 268
+ + LF M + + A+ GGI QIHD I +
Sbjct: 232 HRRAIELFFQMEQHQCSDRSCAIALGACAAAGHLRGGI------QIHDKIQSEIHGTRVL 285
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +LI +Y + G + A +++ M +++S T++I+ A+ H + LF MI +
Sbjct: 286 VLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQ-TGHYSFSVKLFDGMIAE 344
Query: 329 KMGIDDVILCLMLNICANV---ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ ++ +++ A++ A L+ GR+IH+ D V N+LI+MYA+SG +
Sbjct: 345 GINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLL 404
Query: 386 ADANRAFDEM--GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
A+A FD + K V+S+T++I+ YA +G+ +A+E++++M G+ PN++TF ++L
Sbjct: 405 AEAREVFDSILENSKTVVSFTTMISAYAHNGHPRQALEIFREMTARGVAPNEITFATVLA 464
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
AC G G + MI ++ +VD++A+ G L A + M K
Sbjct: 465 ACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLV 524
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFD 531
+ W+ I+ A GN AA +L+D
Sbjct: 525 A-WTTIIAANVQSGNNR----AALDLYD 547
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/494 (23%), Positives = 205/494 (41%), Gaps = 60/494 (12%)
Query: 123 LRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWI 182
LR + Y++ LR C R L GR + I R N + + +YA+C
Sbjct: 42 LRHRSTSQLLLYANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCF 101
Query: 183 EDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD-CFTLGSILRA 241
+ A LF+ + + WN ++ D+ L+R M + +P C + +I+
Sbjct: 102 DTAIALFDAMPDRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIV-- 159
Query: 242 SVGGI-ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
+ G I +L + IH + G ++ + +L+ +YA+ G I A + +
Sbjct: 160 ACGRIKDLAQGRSIH-YRVATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAP 218
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
A++S A H + A +LF M ++ D + L CA L G QIH
Sbjct: 219 WNAIMSALA-GAGHHRRAIELFFQM--EQHQCSDRSCAIALGACAAAGHLRGGIQIHD-- 273
Query: 361 FKYQSSYDAA---VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
K QS V NALI MY + G++ +A R F +M +NV+SWTS+IA A+ G+
Sbjct: 274 -KIQSEIHGTRVLVLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQTGHYS 332
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSH------------------------------ 447
+++L+ M EG+ PN+ T+ S++ A +H
Sbjct: 333 FSVKLFDGMIAEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQN 392
Query: 448 --------TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMN- 498
+GL E E+F ++ + + F+ ++ +A G A + R+M
Sbjct: 393 SLINMYARSGLLAEAREVFDSILENSKTVV---SFTTMISAYAHNGHPRQALEIFREMTA 449
Query: 499 --IKPTASLWSAILGACSIYGNTSLGELAARNLFD--MEPEKSVNYVVLSNIYTAAGAWD 554
+ P ++ +L AC G+ + G + + ++ Y L ++Y G
Sbjct: 450 RGVAPNEITFATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLG 509
Query: 555 NARKTRKLMEERSL 568
A + + M+ + L
Sbjct: 510 FAARVFETMKTKDL 523
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 93/207 (44%), Gaps = 4/207 (1%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDP--STYMSLLQFCIDKKAERQAHLIHAHIITN 59
I+ AN ++G + AL + + P +T +LL C + IH + +
Sbjct: 528 TIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRS 587
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
E + H + YAK G + A + + R +V +WT+M++ ++Q G AL ++
Sbjct: 588 KLEQDAHFQNALAAMYAKCGSLEKATRLYRRCRGSDVATWTSMLAAHSQQGLASVALELY 647
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK-SALLDLYAK 178
+ M GVR N+ T+ L +C++ + GR SI + ++D+ +
Sbjct: 648 AEMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHSITSDYGSQPSAEHFGCMVDVLGR 707
Query: 179 CGWIEDAWILFERIE-RKDVVSWNAMI 204
G + DA L + + D ++W +++
Sbjct: 708 AGKLRDAEELLDSMPFYPDEIAWQSLL 734
>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 803
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 177/563 (31%), Positives = 313/563 (55%), Gaps = 13/563 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY +++ + + IHA +I + S++++ +I Y K+G A K F
Sbjct: 125 DSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVF 184
Query: 89 DRMPERNVVSWTAMISGYA--QNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
+ MPER++VSW +MISGY ++G+ +L++F ML+ G + ++F+ SAL AC+ +
Sbjct: 185 EEMPERDIVSWNSMISGYLALEDGF--RSLMLFKEMLKFGFKPDRFSTMSALGACSHVYS 242
Query: 147 LQGGRMIQGSIQKGRF-VENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
G+ + + R ++ V +++LD+Y+K G + A +F+ I ++++V+WN +IG
Sbjct: 243 PNMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIG 302
Query: 206 GLAMQGFNDDSFWLFRSMMRQ-GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
A D+F F+ M Q G++PD TL ++L A +++ IH ++ G
Sbjct: 303 CYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACA----ILEGRTIHGYAMRRGFL 358
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD-DNHSKEAFDLFK 323
L +LID+Y ++G ++SA ++ + + ++IS ++I+ + ++ N+S A +LF+
Sbjct: 359 PHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYS--ALELFQ 416
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
+ + D + +L A SL+ GRQIHA+ K + + + N+L+ MYA G
Sbjct: 417 KLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCG 476
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
++ DA + F+ + K+V+SW S+I YA HG+G ++ L+ +M + PN TF SLL
Sbjct: 477 DLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLA 536
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
ACS +G+ EGWE F M +Y I P EH+ ++DL R G SA IR+M PTA
Sbjct: 537 ACSISGMVDEGWEYFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMPFLPTA 596
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
+W ++L A + + ++ E AA +F ME + + YV+L N+Y A W++ + + LM
Sbjct: 597 RIWGSLLNASRNHNDITVAEFAAEQIFKMEHDNTGCYVLLLNMYAEARRWEDVNRIKLLM 656
Query: 564 EERSLRKNPGYSFLQSSKKNILL 586
E + + + S +++ K +L
Sbjct: 657 ESKGISRTSSRSTVEAKSKTHVL 679
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 137/452 (30%), Positives = 245/452 (54%), Gaps = 11/452 (2%)
Query: 69 TKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR 128
T+ + +A G + A + FD M + + W MI G+ G AL ++ M+ SGV+
Sbjct: 64 TRALRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVK 123
Query: 129 ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWIL 188
A+ FTY +++ + L+ G+ I + K RFV +++V ++L+ LY K G DA +
Sbjct: 124 ADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKV 183
Query: 189 FERIERKDVVSWNAMIGG-LAMQ-GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
FE + +D+VSWN+MI G LA++ GF S LF+ M++ G KPD F+ S L A
Sbjct: 184 FEEMPERDIVSWNSMISGYLALEDGFR--SLMLFKEMLKFGFKPDRFSTMSALGACSHVY 241
Query: 247 ELMKISQIHDLIIKLGLESSNKLT-GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALI 305
++H ++ +E+ + + S++D+Y+KYG + A ++++ +++ +I++ LI
Sbjct: 242 SPNMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLI 301
Query: 306 SGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS 365
+AR ++ +AF F+ M + DVI ++N+ A L GR IH +A +
Sbjct: 302 GCYAR-NSRVTDAFLCFQKMSEQNGLQPDVI--TLINLLPACAILE-GRTIHGYAMRRGF 357
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKK 425
+ ALIDMY + G++ A FD + +KN+ISW S+IA Y ++G + A+EL++K
Sbjct: 358 LPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQK 417
Query: 426 MKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRG 485
+ ++P+ T S+L A + + EG ++ ++ K R + +V ++A G
Sbjct: 418 LWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIV-KSRYGSNTIILNSLVHMYAMCG 476
Query: 486 QLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
LE A + +K S W++I+ A +++G
Sbjct: 477 DLEDARKCFNHVLLKDVVS-WNSIIMAYAVHG 507
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 79/143 (55%), Gaps = 2/143 (1%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDT--LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
+I+ A + G+ AL+ D+ L D +T S+L + + + IHA+I+ +
Sbjct: 397 SIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKS 456
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
Y SN + ++ YA GD+ ARK F+ + ++VVSW ++I YA +G+ ++ +F
Sbjct: 457 RYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLF 516
Query: 120 SAMLRSGVRANQFTYSSALRACA 142
S M+ S V N+ T++S L AC+
Sbjct: 517 SEMIASKVDPNKSTFASLLAACS 539
>gi|449448940|ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 185/583 (31%), Positives = 295/583 (50%), Gaps = 13/583 (2%)
Query: 3 IVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
I+ G +ALK S+ D T + ++Q C + R +H I
Sbjct: 233 IITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFN 292
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
++L + ++ Y+ G + S+ F+ +P + W +MIS Y G+ A+ +F
Sbjct: 293 LINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFI 352
Query: 121 AMLRSGVRANQFTYSSALRACARMR----WLQGGRMIQGSIQKGRFVENLFVKSALLDLY 176
M ++ + T + L C + W GR + K + ++ +ALL +Y
Sbjct: 353 KMRLERIKEDVRTIAIMLSLCNDLNDGSIW---GRGLHAHAMKSGIELDAYLGNALLSMY 409
Query: 177 AKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLG 236
K I A +FE++ DV+SWN MI A F +F LF M +K + +T+
Sbjct: 410 VKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIV 469
Query: 237 SILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT 296
S+L G +L+ IH IK GLE + L SL ++Y G R+A ++ +
Sbjct: 470 SLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQR 529
Query: 297 DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI 356
D++S +LIS + ++DN K A LF MI ++ + V + +L C +A L LG+ +
Sbjct: 530 DLVSWNSLISSYIKNDNAGK-ALLLFNHMI-SELEPNSVTIINILTSCTQLAHLPLGQCL 587
Query: 357 HAFAFKYQSSY--DAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG 414
HA+ + + S DA++ NA I MYA+ G++ A + F + ++++SW ++I GY HG
Sbjct: 588 HAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHG 647
Query: 415 YGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF 474
G +A + +M +G PN+V+F S+L ACSH+GLT G +LF M+ + I P+ H+
Sbjct: 648 RGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHY 707
Query: 475 SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEP 534
C+VDL R G A I M I+P AS+W A+L +C I N L E L ++EP
Sbjct: 708 GCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSNNKLLETIFGKLVELEP 767
Query: 535 EKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
N+++LSNIY AAG W + RK + ER L K PG S++
Sbjct: 768 SNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWI 810
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 144/529 (27%), Positives = 253/529 (47%), Gaps = 21/529 (3%)
Query: 14 KQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNG-YESNLHLSTK 70
K+A+ + L P+ T ++LL C + R IH + + NG ++ + ++ T
Sbjct: 143 KEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTA 202
Query: 71 VIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
++ FY + VLS R F M RN+VSW A+I+G+ G AL ++S+ML G++ +
Sbjct: 203 LVGFYMRFDAVLSHR-VFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFD 261
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE 190
T ++ACA L+ G + K + +LF+ +ALL++Y+ G +E +W LF
Sbjct: 262 AVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFN 321
Query: 191 RIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR-------ASV 243
+ D WN+MI GF+ ++ LF M + +K D T+ +L S+
Sbjct: 322 AVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSI 381
Query: 244 GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTA 303
G +H +K G+E L +L+ +Y K+ I +A ++ M D+IS
Sbjct: 382 WG------RGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNT 435
Query: 304 LISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY 363
+IS FA+ +K AF+LF M ++ + + +L C + + L GR IH FA K
Sbjct: 436 MISAFAQSMFRAK-AFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKN 494
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELY 423
+ ++ +L +MY G+ A F ++++SW SLI+ Y K+ +A+ L+
Sbjct: 495 GLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLF 554
Query: 424 KKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR-AEHFSCVVDLFA 482
M E + PN VT +++L +C+ G L + L A + + ++A
Sbjct: 555 NHMISE-LEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYA 613
Query: 483 RRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
R G+L+ A + + + S W+A++ ++G LA + D
Sbjct: 614 RCGKLQYAEKIFCTLQTRSIVS-WNAMITGYGMHGRGRDATLAFAQMLD 661
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 129/419 (30%), Positives = 221/419 (52%), Gaps = 4/419 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D +T +L+ C A IH+ I +++ + T ++ FY K G V A K F
Sbjct: 59 DSATMPLVLKACGRLNAIGNGVRIHSFIRGLDLINDVRVGTALVDFYCKCGLVAEASKVF 118
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
MPER++VSW A+ISGY + A+L+F M ++G+ N T + L AC M L+
Sbjct: 119 VEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELR 178
Query: 149 GGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ I G ++ G F + +V +AL+ Y + + + F + +++VSWNA+I G
Sbjct: 179 LGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAVLSHRV-FSLMLVRNIVSWNAIITGF 237
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
G + L+ SM+ +G+K D T+ +++A L Q+H L IK L +
Sbjct: 238 LNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDL 297
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ +L+++Y+ GS+ S++ L+ ++ +D ++IS + H+ EA LF M L
Sbjct: 298 FILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHA-EAIALFIKMRL 356
Query: 328 KKMGIDDVILCLMLNICANVASLNL-GRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+++ D + +ML++C ++ ++ GR +HA A K DA +GNAL+ MY K +I
Sbjct: 357 ERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQIT 416
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A F++M +VISW ++I+ +A+ + +A EL+ M + N T +SLL C
Sbjct: 417 AAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFC 475
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 179/349 (51%), Gaps = 3/349 (0%)
Query: 99 WTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQ 158
W ++I + + D L ++ M G+ + T L+AC R+ + G I I+
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSFIR 87
Query: 159 KGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFW 218
+ ++ V +AL+D Y KCG + +A +F + +D+VSWNA+I G ++
Sbjct: 88 GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVL 147
Query: 219 LFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS-LIDVY 277
LF M + G+ P+ T+ ++L A +EL +IH ++ GL + G+ L+ Y
Sbjct: 148 LFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFY 207
Query: 278 AKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVIL 337
++ ++ S ++++ ML +I+S A+I+GF + +K A L+ M+++ + D V +
Sbjct: 208 MRFDAVLS-HRVFSLMLVRNIVSWNAIITGFLNVGDCAK-ALKLYSSMLIEGIKFDAVTM 265
Query: 338 CLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD 397
+++ CA L LG Q+H A K+ D + NAL++MY+ +G + + F+ +
Sbjct: 266 LVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPT 325
Query: 398 KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
+ W S+I+ Y G+ EAI L+ KM+ E + + T +L C+
Sbjct: 326 SDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCN 374
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 189/617 (30%), Positives = 305/617 (49%), Gaps = 67/617 (10%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHII-TNGYESNLHLSTKVIIFYAKVGDVLSARKAFD 89
S Y +LL + A +H I+ T + HL ++ Y K G AR+ FD
Sbjct: 7 SQYAALLS-AAARTEPHAAGALHCVILRTLPHPPPTHLLNHLLTAYGKAGRHARARRVFD 65
Query: 90 RMP-------------------------------ERNVVSWTAMISGYAQNGYDENALLV 118
P +R+ VS+ A+I+G++ G A+ +
Sbjct: 66 ATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRL 125
Query: 119 FSAMLRSG--VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLY 176
+ +LR+G VR ++ T S+ + A + + GR I + F N FV S L+ +Y
Sbjct: 126 YHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMY 185
Query: 177 AK-------------------------------CGWIEDAWILFERIERKDVVSWNAMIG 205
AK C +E+A LFE + +D ++W M+
Sbjct: 186 AKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVT 245
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
G G + FR M QG+ D +T GSIL A L + QIH II+ +
Sbjct: 246 GFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDD 305
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ + +L+D+Y+K SI+ A +R M +IIS TALI G+ ++ S+EA +F +M
Sbjct: 306 NVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGC-SEEAVRVFSEM 364
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ DD L +++ CAN+ASL G Q H A + V NAL+ +Y K G I
Sbjct: 365 QRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSI 424
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
DA+R FDEM + +SWT+L+ GYA+ G E I+L++KM + + P+ VTF+ +L AC
Sbjct: 425 EDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSAC 484
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
S G +G F M + I+P +H++C++DL++R G+L+ A I+QM + P A
Sbjct: 485 SRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIG 544
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
W +L AC + G+ +G+ AA NL +++P+ +YV+L +++ G W+ + R+ M +
Sbjct: 545 WGTLLSACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRD 604
Query: 566 RSLRKNPGYSFLQSSKK 582
R ++K PG S+++ K
Sbjct: 605 RQVKKEPGCSWIKYKNK 621
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 150/302 (49%), Gaps = 4/302 (1%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ G QAL F + +D T+ S+L C A Q IHA+II Y+ N+
Sbjct: 249 QNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVF 308
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ + ++ Y+K + A AF RM +N++SWTA+I GY QNG E A+ VFS M R G
Sbjct: 309 VGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDG 368
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
+ + FT S + +CA + L+ G + + V +AL+ LY KCG IEDA
Sbjct: 369 IDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAH 428
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGG 245
LF+ + D VSW A++ G A G ++ LF M+ + +KPD T +L A S G
Sbjct: 429 RLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAG 488
Query: 246 IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTAL 304
S H + G+ + +ID+Y++ G ++ A + + M + D I L
Sbjct: 489 FVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTL 548
Query: 305 IS 306
+S
Sbjct: 549 LS 550
>gi|449502637|ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 185/583 (31%), Positives = 295/583 (50%), Gaps = 13/583 (2%)
Query: 3 IVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
I+ G +ALK S+ D T + ++Q C + R +H I
Sbjct: 233 IITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFN 292
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
++L + ++ Y+ G + S+ F+ +P + W +MIS Y G+ A+ +F
Sbjct: 293 LINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFI 352
Query: 121 AMLRSGVRANQFTYSSALRACARMR----WLQGGRMIQGSIQKGRFVENLFVKSALLDLY 176
M ++ + T + L C + W GR + K + ++ +ALL +Y
Sbjct: 353 KMRLERIKEDVRTIAIMLSLCNDLNDGSIW---GRGLHAHAMKSGIELDAYLGNALLSMY 409
Query: 177 AKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLG 236
K I A +FE++ DV+SWN MI A F +F LF M +K + +T+
Sbjct: 410 VKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIV 469
Query: 237 SILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT 296
S+L G +L+ IH IK GLE + L SL ++Y G R+A ++ +
Sbjct: 470 SLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQR 529
Query: 297 DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI 356
D++S +LIS + ++DN K A LF MI ++ + V + +L C +A L LG+ +
Sbjct: 530 DLVSWNSLISSYIKNDNAGK-ALLLFNHMI-SELEPNSVTIINILTSCTQLAHLPLGQCL 587
Query: 357 HAFAFKYQSSY--DAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG 414
HA+ + + S DA++ NA I MYA+ G++ A + F + ++++SW ++I GY HG
Sbjct: 588 HAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHG 647
Query: 415 YGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHF 474
G +A + +M +G PN+V+F S+L ACSH+GLT G +LF M+ + I P+ H+
Sbjct: 648 RGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHY 707
Query: 475 SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEP 534
C+VDL R G A I M I+P AS+W A+L +C I N L E L ++EP
Sbjct: 708 GCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSNNKLLETIFGKLVELEP 767
Query: 535 EKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
N+++LSNIY AAG W + RK + ER L K PG S++
Sbjct: 768 SNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWI 810
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 144/529 (27%), Positives = 253/529 (47%), Gaps = 21/529 (3%)
Query: 14 KQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNG-YESNLHLSTK 70
K+A+ + L P+ T ++LL C + R IH + + NG ++ + ++ T
Sbjct: 143 KEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTA 202
Query: 71 VIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
++ FY + VLS R F M RN+VSW A+I+G+ G AL ++S+ML G++ +
Sbjct: 203 LVGFYMRFDAVLSHR-VFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFD 261
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE 190
T ++ACA L+ G + K + +LF+ +ALL++Y+ G +E +W LF
Sbjct: 262 AVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFN 321
Query: 191 RIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR-------ASV 243
+ D WN+MI GF+ ++ LF M + +K D T+ +L S+
Sbjct: 322 AVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSI 381
Query: 244 GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTA 303
G +H +K G+E L +L+ +Y K+ I +A ++ M D+IS
Sbjct: 382 WG------RGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNT 435
Query: 304 LISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY 363
+IS FA+ +K AF+LF M ++ + + +L C + + L GR IH FA K
Sbjct: 436 MISAFAQSMFRAK-AFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKN 494
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELY 423
+ ++ +L +MY G+ A F ++++SW SLI+ Y K+ +A+ L+
Sbjct: 495 GLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLF 554
Query: 424 KKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR-AEHFSCVVDLFA 482
M E + PN VT +++L +C+ G L + L A + + ++A
Sbjct: 555 NHMISE-LEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYA 613
Query: 483 RRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
R G+L+ A + + + S W+A++ ++G LA + D
Sbjct: 614 RCGKLQYAEKIFCTLQTRSIVS-WNAMITGYGMHGRGRDATLAFAQMLD 661
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 129/419 (30%), Positives = 221/419 (52%), Gaps = 4/419 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D +T +L+ C A IH+ I +++ + T ++ FY K G V A K F
Sbjct: 59 DSATMPLVLKACGRLNAIGNGVRIHSCIRGLDLINDVRVGTALVDFYCKCGLVAEASKVF 118
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
MPER++VSW A+ISGY + A+L+F M ++G+ N T + L AC M L+
Sbjct: 119 VEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELR 178
Query: 149 GGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ I G ++ G F + +V +AL+ Y + + + F + +++VSWNA+I G
Sbjct: 179 LGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAVLSHRV-FSLMLVRNIVSWNAIITGF 237
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
G + L+ SM+ +G+K D T+ +++A L Q+H L IK L +
Sbjct: 238 LNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDL 297
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ +L+++Y+ GS+ S++ L+ ++ +D ++IS + H+ EA LF M L
Sbjct: 298 FILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHA-EAIALFIKMRL 356
Query: 328 KKMGIDDVILCLMLNICANVASLNL-GRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+++ D + +ML++C ++ ++ GR +HA A K DA +GNAL+ MY K +I
Sbjct: 357 ERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQIT 416
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A F++M +VISW ++I+ +A+ + +A EL+ M + N T +SLL C
Sbjct: 417 AAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFC 475
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 180/347 (51%), Gaps = 4/347 (1%)
Query: 99 WTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQ 158
W ++I + + D L ++ M G+ + T L+AC R+ + G I I+
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSCIR 87
Query: 159 KGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFW 218
+ ++ V +AL+D Y KCG + +A +F + +D+VSWNA+I G ++
Sbjct: 88 GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVL 147
Query: 219 LFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS-LIDVY 277
LF M + G+ P+ T+ ++L A +EL +IH ++ GL + G+ L+ Y
Sbjct: 148 LFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFY 207
Query: 278 AKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVIL 337
++ ++ S ++++ ML +I+S A+I+GF + +K A L+ M+++ + D V +
Sbjct: 208 MRFDAVLS-HRVFSLMLVRNIVSWNAIITGFLNVGDCAK-ALKLYSSMLIEGIKFDAVTM 265
Query: 338 CLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD 397
+++ CA L LG Q+H A K+ D + NAL++MY+ +G + + F+ +
Sbjct: 266 LVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPT 325
Query: 398 KNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ W S+I+ Y G+ EAI L+ KM+ E + DV ++++ +
Sbjct: 326 SDAALWNSMISSYIGFGFHAEAIALFIKMRLE-RIKEDVRTIAIMLS 371
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 70/121 (57%), Gaps = 2/121 (1%)
Query: 327 LKKMGI--DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
++ +GI D + L+L C + ++ G +IH+ D VG AL+D Y K G
Sbjct: 51 MESLGITPDSATMPLVLKACGRLNAIGNGVRIHSCIRGLDLINDVRVGTALVDFYCKCGL 110
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+A+A++ F EM +++++SW +LI+GY EA+ L+ +MK G+ PN T ++LL A
Sbjct: 111 VAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLA 170
Query: 445 C 445
C
Sbjct: 171 C 171
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 195/580 (33%), Positives = 305/580 (52%), Gaps = 66/580 (11%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
SL + DK ER L +++ GY N L A K FD MP++
Sbjct: 94 SLARDLFDKMPERD--LFSWNVMLTGYVRNRRLG--------------EAHKLFDLMPKK 137
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
+VVSW AM+SGYAQNG+ + A VF+ M N +++ L A ++ GR+ +
Sbjct: 138 DVVSWNAMLSGYAQNGFVDEAREVFNKMPHR----NSISWNGLLAA-----YVHNGRLKE 188
Query: 155 GSIQKGRFVEN-----LFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
R E+ L + L+ Y K + DA LF+R+ +DV+SWN MI G A
Sbjct: 189 AR----RLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQ 244
Query: 210 QG--------FND----DSF-W--LFRSMMRQGMKPDC------------FTLGSILRAS 242
G FN+ D F W + ++ GM + + ++L
Sbjct: 245 VGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGY 304
Query: 243 VGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCT 302
V +++ ++ + + + S N ++I Y + G I A +L+ M + D +S
Sbjct: 305 VQYKKMVIAGELFEAMPCRNISSWN----TMITGYGQNGGIAQARKLFDMMPQRDCVSWA 360
Query: 303 ALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK 362
A+ISG+A++ H +EA ++F +M + L+ CA++A+L LG+Q+H K
Sbjct: 361 AIISGYAQN-GHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVK 419
Query: 363 YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIEL 422
VGNAL+ MY K G +AN F+ + +K+V+SW ++IAGYA+HG+G +A+ L
Sbjct: 420 AGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVL 479
Query: 423 YKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFA 482
++ MK G+ P+++T + +L ACSH+GL G E F M Y + P ++H++C++DL
Sbjct: 480 FESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLG 539
Query: 483 RRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVV 542
R G+LE A N++R M P A+ W A+LGA I+GNT LGE AA +F MEP+ S YV+
Sbjct: 540 RAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVL 599
Query: 543 LSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
LSN+Y A+G W + K R M E ++K GYS+++ K
Sbjct: 600 LSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQNK 639
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 182/380 (47%), Gaps = 29/380 (7%)
Query: 69 TKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR 128
K I + + G SA + F+ MP R+ VS+ AMISGY +N A +F M +
Sbjct: 50 NKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMPERDL- 108
Query: 129 ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWIL 188
F+++ L R R L + + K +++ +A+L YA+ G++++A +
Sbjct: 109 ---FSWNVMLTGYVRNRRLGEAHKLFDLMPK----KDVVSWNAMLSGYAQNGFVDEAREV 161
Query: 189 FERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR-QGMKPDCFTLGSILRASVGGI- 246
F ++ ++ +SWN ++ G ++ LF S + + +C G + R +G
Sbjct: 162 FNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLGDAR 221
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
+L + D+I S N ++I YA+ G + A +L+ D+ + TA++S
Sbjct: 222 QLFDRMPVRDVI------SWN----TMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVS 271
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
G+ + + EA F +M +K +++ ML + + ++ F+
Sbjct: 272 GYVQ-NGMVDEARKYFDEMPVK----NEISYNAMLAGYVQYKKMVIAGEL----FEAMPC 322
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
+ + N +I Y ++G IA A + FD M ++ +SW ++I+GYA++G+ EA+ ++ +M
Sbjct: 323 RNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEM 382
Query: 427 KHEGMVPNDVTFLSLLFACS 446
K +G N TF L C+
Sbjct: 383 KRDGESSNRSTFSCALSTCA 402
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 2/183 (1%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
ST+ L C D A +H ++ G+E+ + ++ Y K G A F+
Sbjct: 392 STFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEG 451
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+ E++VVSW MI+GYA++G+ AL++F +M ++GV+ ++ T L AC+ + G
Sbjct: 452 IEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRG 511
Query: 151 RMIQGSIQKGRFVENLFVK-SALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGGLA 208
S+ + V+ + ++DL + G +E+A L + SW A++G
Sbjct: 512 TEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASR 571
Query: 209 MQG 211
+ G
Sbjct: 572 IHG 574
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 95/219 (43%), Gaps = 48/219 (21%)
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI------------------------- 407
NA+I Y ++ + + A FD+M ++++ SW ++
Sbjct: 81 NAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVV 140
Query: 408 ------AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM 461
+GYA++G+ EA E++ KM H N +++ LL A H G E LF
Sbjct: 141 SWNAMLSGYAQNGFVDEAREVFNKMPHR----NSISWNGLLAAYVHNGRLKEARRLFESQ 196
Query: 462 INKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSL 521
N I ++C++ + +R L A + +M ++ S W+ + I G +
Sbjct: 197 SNWELI-----SWNCLMGGYVKRNMLGDARQLFDRMPVRDVIS-WNTM-----ISGYAQV 245
Query: 522 GELA-ARNLFDMEPEKSV-NYVVLSNIYTAAGAWDNARK 558
G+L+ A+ LF+ P + V + + + Y G D ARK
Sbjct: 246 GDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARK 284
>gi|302799994|ref|XP_002981755.1| hypothetical protein SELMODRAFT_115083 [Selaginella moellendorffii]
gi|300150587|gb|EFJ17237.1| hypothetical protein SELMODRAFT_115083 [Selaginella moellendorffii]
Length = 673
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 173/557 (31%), Positives = 296/557 (53%), Gaps = 15/557 (2%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y SL++ C + + IHAHI+ +GY L ++ Y K + A F+ +
Sbjct: 13 YESLIRRCANPHSLEAGRSIHAHILRHGYGGERFLLNSLVEMYCKCDSLRDATAVFELVA 72
Query: 93 -ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
ER W +I+ AQ G ++ ++ M GV+ N T S L ACA + L+ GR
Sbjct: 73 RERIAFPWNILIAANAQRGQSRESIALYRRMSCEGVKPNAITLVSVLGACANLEDLKTGR 132
Query: 152 MIQGS-IQKGR-------FVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
I S + GR + + +AL+ +Y +CG + DA +FE I +D+ +WNAM
Sbjct: 133 EIHRSHVLGGRSRPYERPMPVDAVMATALVTMYGRCGSVADARAVFEGICGRDLAAWNAM 192
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLIIKL 261
+ + G + + R M +G++P T +L +VG ++ + IH I+
Sbjct: 193 VAAYSRNGQMAQAVLVLRRMAVEGVRPGEGTFVGMLSWCCTVGALD--EARSIHAHILAT 250
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDL 321
GLES + +L+ +Y + GS+ A ++ + DI++ A+I+ +A+ HS+++ +
Sbjct: 251 GLESRPTVGTTLVSMYGRCGSLGGAVCAFQRIRDKDIVAWNAMIAAYAQS-GHSRDSIRI 309
Query: 322 FKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAK 381
+ M L+ + +D V L +L+ C+++A + R +HA D +G AL++ YA+
Sbjct: 310 YHVMDLEGVRVDKVTLIGVLDACSSLALTSKTRLVHARIVDTGVELDVVLGTALVNAYAR 369
Query: 382 SGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSL 441
G + DA+ F EM ++NV +W++++A YA+ G+ ++E+Y++M+ +G+ PN +T++S+
Sbjct: 370 GGHLVDADLVFAEMEERNVATWSAMVAAYAQTGHPDRSLEMYREMQLQGLRPNYITYVSI 429
Query: 442 LFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
LFAC+H GL G + F M Y I EH SC+VDL R G+L+ A ++ + +
Sbjct: 430 LFACNHAGLLDHGLDYFASMGRDYGIESCEEHCSCIVDLLGRSGRLDEAEALMASVPYRL 489
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRK 561
S W +LGAC +G+ G AR F +E + YV LSN+Y G WD + R+
Sbjct: 490 GISAWMCLLGACRTHGDVERGARVARRAFQVESGEVAPYVALSNMYAGHGMWDEVSRVRQ 549
Query: 562 LMEERSLRKNPGYSFLQ 578
LM +L K+ G SF++
Sbjct: 550 LMAN-TLDKSTGKSFVE 565
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 151/294 (51%), Gaps = 3/294 (1%)
Query: 3 IVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
+V A + GQ+ QA+ ++ T++ +L +C A +A IHAHI+ G
Sbjct: 192 MVAAYSRNGQMAQAVLVLRRMAVEGVRPGEGTFVGMLSWCCTVGALDEARSIHAHILATG 251
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
ES + T ++ Y + G + A AF R+ ++++V+W AMI+ YAQ+G+ +++ ++
Sbjct: 252 LESRPTVGTTLVSMYGRCGSLGGAVCAFQRIRDKDIVAWNAMIAAYAQSGHSRDSIRIYH 311
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M GVR ++ T L AC+ + R++ I ++ + +AL++ YA+ G
Sbjct: 312 VMDLEGVRVDKVTLIGVLDACSSLALTSKTRLVHARIVDTGVELDVVLGTALVNAYARGG 371
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+ DA ++F +E ++V +W+AM+ A G D S ++R M QG++P+ T SIL
Sbjct: 372 HLVDADLVFAEMEERNVATWSAMVAAYAQTGHPDRSLEMYREMQLQGLRPNYITYVSILF 431
Query: 241 A-SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
A + G+ + + G+ES + ++D+ + G + A L S+
Sbjct: 432 ACNHAGLLDHGLDYFASMGRDYGIESCEEHCSCIVDLLGRSGRLDEAEALMASV 485
>gi|15239085|ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65570
gi|8978285|dbj|BAA98176.1| unnamed protein product [Arabidopsis thaliana]
gi|332010689|gb|AED98072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 175/569 (30%), Positives = 318/569 (55%), Gaps = 7/569 (1%)
Query: 18 KFSLSC--PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFY 75
+F L C DTL + LL+ CID+++ I AH++ +G+ + + +K++
Sbjct: 51 QFRLLCITCDTLTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEIS-GSKLVDAS 109
Query: 76 AKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYS 135
K GD+ AR+ FD M ER++V+W ++I+ ++ + A+ ++ M+ + V +++T S
Sbjct: 110 LKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLS 169
Query: 136 SALRACARMRWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIER 194
S +A + + + + G ++ G V N+FV SAL+D+Y K G +A ++ +R+E
Sbjct: 170 SVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEE 229
Query: 195 KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQI 254
KDVV A+I G + +G + ++ F+SM+ + ++P+ +T S+L + ++ I
Sbjct: 230 KDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLI 289
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH 314
H L++K G ES+ SL+ +Y + + + ++++ + + +S T+LISG ++
Sbjct: 290 HGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQN-GR 348
Query: 315 SKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNA 374
+ A F+ M+ + + L L C+N+A GRQIH KY D G+
Sbjct: 349 EEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSG 408
Query: 375 LIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
LID+Y K G A FD + + +VIS ++I YA++G+G EA++L+++M + G+ PN
Sbjct: 409 LIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPN 468
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI 494
DVT LS+L AC+++ L EG ELF D K +I+ +H++C+VDL R G+LE A M+
Sbjct: 469 DVTVLSVLLACNNSRLVEEGCELF-DSFRKDKIMLTNDHYACMVDLLGRAGRLEEA-EML 526
Query: 495 RQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWD 554
I P LW +L AC ++ + E R + ++EP +++SN+Y + G W+
Sbjct: 527 TTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWN 586
Query: 555 NARKTRKLMEERSLRKNPGYSFLQSSKKN 583
+ + M++ L+KNP S+++ +K+
Sbjct: 587 RVIEMKSKMKDMKLKKNPAMSWVEINKET 615
>gi|302793632|ref|XP_002978581.1| hypothetical protein SELMODRAFT_109016 [Selaginella moellendorffii]
gi|300153930|gb|EFJ20567.1| hypothetical protein SELMODRAFT_109016 [Selaginella moellendorffii]
Length = 785
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 159/523 (30%), Positives = 288/523 (55%), Gaps = 4/523 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+++LL +A + L+H+HI+ +G N+ L T ++ Y+K + R F
Sbjct: 261 DKVTFVALLTMSNGPEALTEVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLF 320
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
++MP+RNV+SW M++ YA++G A+ + M GV+ + T L C L+
Sbjct: 321 EKMPQRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLK 380
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
GR + G I +GR +L + ++LL++Y +CG +E A ++F+ I +++V+SW AM+ +
Sbjct: 381 LGRKVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYS 440
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
Q D + LF ++ G+KP C T L A VG L K +H ++ G +
Sbjct: 441 RQNRQDMALLLFHAIHLSGVKPTCITFLEALDACVGAEALDKGRLVHSCAVQSGNDIDVS 500
Query: 269 LTGSLIDVYAKYGSIRSAYQLY-RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
L +L+ +Y + GSIR A + + ++ + ++ +A+I+ F + +E + M
Sbjct: 501 LGSALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIAAFVQ-HGQDREGLQHLRFMQQ 559
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA-VGNALIDMYAKSGEIA 386
+ + + L+ C+N+A L G++IH++ + + +AA V N+L+ MY K G +
Sbjct: 560 QGLDMSPATFASTLSACSNLADLREGKRIHSYVRERRFDTEAATVTNSLVTMYGKCGSLD 619
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A F+ ++ I W ++I+GYA+H +A+EL+ +M+ EG+ P+ VTF+ +L CS
Sbjct: 620 CAREVFETSRRQDTICWNAIISGYAQHSQTRDAVELFHRMQQEGVAPDPVTFVCILSVCS 679
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
H GL EG + M+ + + P ++++CV+DL R G+L+ A I+ + +P
Sbjct: 680 HGGLLDEGVYAYASMV-ELGLEPTQDNYACVIDLLGRAGKLQEAEEFIQSLGTRPAIETL 738
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTA 549
+++L +C +G+ G AA + +M+P S +VVLS+IY+A
Sbjct: 739 TSLLSSCKSHGDVQRGRRAAEGIMEMDPRSSSAHVVLSSIYSA 781
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 132/508 (25%), Positives = 251/508 (49%), Gaps = 9/508 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ +++ C A ++ ++ G + + + Y G V A++ FD M
Sbjct: 63 TWTAIIGVCAQHHCHSLAIILLRQMLLEGVKPDNITLLAALTMYGSCGSVDDAKRVFDAM 122
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P RNV++WTAMI +A E A VF M G ++N TY + ++AC++ +L+ G
Sbjct: 123 PARNVITWTAMIGAHAVTSL-EQAFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGI 181
Query: 152 MIQ-GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
++ S++ +E +AL+ +Y +CG +EDA +F + +D+++WNA+I
Sbjct: 182 ILHMRSVESSSAMETPLC-NALITMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQH 240
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
G +++ L++ M+++G KPD T ++L S G L ++ +H I++ G+ + L
Sbjct: 241 GHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTEVKLVHSHIVESGVSINIALG 300
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
+L+ +Y+K S+ L+ M + ++IS +++ +A+ ++A + + M L +
Sbjct: 301 TALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAK-HGLGRKAVQITEYMQLDGV 359
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
D+V +LN+C A L LGR++H + + + D + N+L++MY + GE+ A
Sbjct: 360 KPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEM 419
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
FD + +NVISWT+++ Y++ A+ L+ + G+ P +TFL L AC
Sbjct: 420 VFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTCITFLEALDACVGAEA 479
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
+G + + + + S +V ++ R G + A ++ WSA++
Sbjct: 480 LDKGRLVHSCAVQSGNDID-VSLGSALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMI 538
Query: 511 GACSIYGNTSLGELAARNL----FDMEP 534
A +G G R + DM P
Sbjct: 539 AAFVQHGQDREGLQHLRFMQQQGLDMSP 566
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 134/527 (25%), Positives = 258/527 (48%), Gaps = 4/527 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
TY++L+Q C + ++H + + L +I Y + G + AR F M
Sbjct: 163 TYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALITMYGRCGRLEDARAIFSSM 222
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
ER++++W A+I+ Y Q+G+ E A+L++ ML+ G + ++ T+ + L L +
Sbjct: 223 VERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTEVK 282
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
++ I + N+ + +AL+ +Y+KC +ED LFE++ +++V+SWN M+ A G
Sbjct: 283 LVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHG 342
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
+ + M G+KPD T +L G +L ++H I + E+ L
Sbjct: 343 LGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWN 402
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
SL+++Y + G + A ++ +L+ ++IS TA+++ ++R N A LF + L +
Sbjct: 403 SLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSR-QNRQDMALLLFHAIHLSGVK 461
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
+ L+ C +L+ GR +H+ A + + D ++G+AL+ MY + G I DA
Sbjct: 462 PTCITFLEALDACVGAEALDKGRLVHSCAVQSGNDIDVSLGSALVAMYGRCGSIRDAKAC 521
Query: 392 FDEMG-DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
FD+ KN ++W+++IA + +HG E ++ + M+ +G+ + TF S L ACS+
Sbjct: 522 FDDTEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQGLDMSPATFASTLSACSNLAD 581
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
EG + + + + A + +V ++ + G L+ A + + T W+AI+
Sbjct: 582 LREGKRIHSYVRERRFDTEAATVTNSLVTMYGKCGSLDCAREVFETSRRQDTIC-WNAII 640
Query: 511 GACSIYGNTSLG-ELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNA 556
+ + T EL R + V +V + ++ + G D
Sbjct: 641 SGYAQHSQTRDAVELFHRMQQEGVAPDPVTFVCILSVCSHGGLLDEG 687
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 129/488 (26%), Positives = 236/488 (48%), Gaps = 57/488 (11%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
LLQ C KA A +H+ I+ ++ + L +I Y K + A + F+RM +N
Sbjct: 1 LLQACPKVKALDVARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKN 60
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG 155
V +WTA+I AQ+ A+++ ML GV+ + T +A
Sbjct: 61 VYTWTAIIGVCAQHHCHSLAIILLRQMLLEGVKPDNITLLAA------------------ 102
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD 215
L +Y CG ++DA +F+ + ++V++W AMIG A+ +
Sbjct: 103 -----------------LTMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAVTSL-EQ 144
Query: 216 SFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQI-HDLIIKLGLESSNKLTGSLI 274
+F +FR M +G K + T ++++A E +++ I H ++ L +LI
Sbjct: 145 AFKVFRLMELEGFKSNFVTYVTLVQA-CSKPEFLEVGIILHMRSVESSSAMETPLCNALI 203
Query: 275 DVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD 334
+Y + G + A ++ SM++ DII+ ALI+ + + H +EA L++ M+ + D
Sbjct: 204 TMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQ-HGHVEEAVLLYQLMLQEGCKPDK 262
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE 394
V +L + +L + +H+ + S + A+G AL+ MY+K + D F++
Sbjct: 263 VTFVALLTMSNGPEALTEVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEK 322
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT-----G 449
M +NVISW ++ YAKHG G +A+++ + M+ +G+ P++VT + LL C+ + G
Sbjct: 323 MPQRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLG 382
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA---YNMIRQMNIKPTASLW 506
GW I + R ++ +++++ R G++E A ++ I Q N+ W
Sbjct: 383 RKVHGW------IAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGILQRNVIS----W 432
Query: 507 SAILGACS 514
+A+L A S
Sbjct: 433 TAMLTAYS 440
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 11/164 (6%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESN-LHLSTKVIIFYAKVGDVLSARK 86
+ P+T+ S L C + R+ IH+++ +++ ++ ++ Y K G + AR+
Sbjct: 564 MSPATFASTLSACSNLADLREGKRIHSYVRERRFDTEAATVTNSLVTMYGKCGSLDCARE 623
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
F+ ++ + W A+ISGYAQ+ +A+ +F M + GV + T+ L C+
Sbjct: 624 VFETSRRQDTICWNAIISGYAQHSQTRDAVELFHRMQQEGVAPDPVTFVCILSVCS---- 679
Query: 147 LQGGRMIQGSIQKGRFVENLFVKS-----ALLDLYAKCGWIEDA 185
GG + +G VE + ++DL + G +++A
Sbjct: 680 -HGGLLDEGVYAYASMVELGLEPTQDNYACVIDLLGRAGKLQEA 722
>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 866
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 178/554 (32%), Positives = 298/554 (53%), Gaps = 4/554 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ +L+ C + +H H++ GYE ++ + +I Y K GDV SAR F
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLF 254
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
DRMP R+++SW AMISGY +NG L +F AM V + T +S + AC + +
Sbjct: 255 DRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRR 314
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
GR I + F ++ V ++L +Y G +A LF R++ KD+VSW MI G
Sbjct: 315 LGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYE 374
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
+ + +R M + +KPD T+ ++L A +L ++H L IK L S
Sbjct: 375 YNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVI 434
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ +LI++Y+K I A ++ ++ + ++IS T++I+G R +N EA F+ M +
Sbjct: 435 VANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGL-RLNNRCFEALIFFRQMKM- 492
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ + + L L CA + +L G++IHA + D + NAL+DMY + G + A
Sbjct: 493 TLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIA 552
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
F+ K+V SW L+ GY++ G G +EL+ +M + P+++TF+SLL C +
Sbjct: 553 WNQFNSQ-KKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKS 611
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
+ +G F+ M +Y + P +H++CVVDL R G+L+ A+ I++M + P ++W A
Sbjct: 612 QMVRQGLMYFSKM-EEYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGA 670
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L AC I+ N LGEL+A+ +F+++ Y++L N+Y G W K R++M+E L
Sbjct: 671 LLNACRIHHNIDLGELSAQRIFELDKGSVGYYILLCNLYADCGKWREVAKVRRMMKENGL 730
Query: 569 RKNPGYSFLQSSKK 582
+ G S+++ K
Sbjct: 731 TVDAGCSWVEVKGK 744
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 151/520 (29%), Positives = 264/520 (50%), Gaps = 20/520 (3%)
Query: 11 GQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLS 68
G+L++A+K S+ +D +++L++ C K+A + +++ +++ ++ L
Sbjct: 73 GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVELG 132
Query: 69 TKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML-RSGV 127
+ + + G+++ A F +M ERN+ SW ++ GYA+ GY + A+ ++ ML GV
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGV 192
Query: 128 RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWI 187
+ + +T+ LR C + L GR + + + + ++ V +AL+ +Y KCG ++ A +
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 188 LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS--VGG 245
LF+R+ R+D++SWNAMI G G + LF +M + PD TL S++ A +G
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGD 312
Query: 246 IELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALI 305
L + IH +I G + SL +Y GS R A +L+ M DI+S T +I
Sbjct: 313 RRLGR--DIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMI 370
Query: 306 SGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS 365
SG+ + K A D ++ M + D++ + +L+ CA + L+ G ++H A K +
Sbjct: 371 SGYEYNFLPEK-AIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL 429
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKK 425
V N LI+MY+K I A F + KNVISWTS+IAG + EA+ +++
Sbjct: 430 ISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQ 489
Query: 426 MKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY----RILPRAEHFSCVVDLF 481
MK + PN +T + L AC+ G G E+ ++ LP A ++D++
Sbjct: 490 MKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNA-----LLDMY 543
Query: 482 ARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSL 521
R G++ A+N K S W+ +L S G S+
Sbjct: 544 VRCGRMNIAWNQFNSQ--KKDVSSWNILLTGYSERGQGSV 581
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 212/411 (51%), Gaps = 4/411 (0%)
Query: 103 ISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRF 162
+ G NG E A+ + ++M V ++ + + +R C R + G +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMN 125
Query: 163 VENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRS 222
++ + +A L ++ + G + DAW +F ++ +++ SWN ++GG A QG+ D++ L+
Sbjct: 126 SLSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHR 185
Query: 223 MM-RQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYG 281
M+ G+KPD +T +LR G +L + ++H +++ G E + +LI +Y K G
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 282 SIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLML 341
++SA L+ M + DIIS A+ISG+ ++ E LF M + D + L ++
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYF-ENGMGHEGLKLFFAMRGLSVDPDLMTLTSVI 304
Query: 342 NICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVI 401
+ C + LGR IHA+ + D +V N+L MY +G +A + F M K+++
Sbjct: 305 SACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIV 364
Query: 402 SWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM 461
SWT++I+GY + +AI+ Y+ M + + P+++T ++L AC+ G G EL
Sbjct: 365 SWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLA 424
Query: 462 INKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
I K R++ + +++++++ ++ A ++ + K S W++I+
Sbjct: 425 I-KARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVIS-WTSIIAG 473
>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 676
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 171/547 (31%), Positives = 301/547 (55%), Gaps = 6/547 (1%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y SL+ +KK+ +H HI+ +G + K+I Y K + ARK FD MP
Sbjct: 4 YTSLIAQFTNKKSLTTLKSLHTHILKSGSLFSF-FGHKLIDGYIKCSVITEARKLFDEMP 62
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
R++V+W +MIS + G + A+ ++ ML GV + +T+S+ +A + M + G+
Sbjct: 63 NRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQK 122
Query: 153 IQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
G ++ G V + FV + ++D+YAK G ++DA +F+R+ KDVV + A+I G +G
Sbjct: 123 AHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRG 182
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI-ELMKISQIHDLIIKLGLESSNKLT 270
+ ++ +F M+ +KP+ +TL S+L S G + +L+ IH L++K GLES
Sbjct: 183 LDGEALEVFEDMVGSRIKPNEYTLASVL-VSCGNLGDLVNGKLIHGLVVKSGLESVVASQ 241
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
SL+ +Y+K + + +++ S+ ++ T+ I G ++ + A +F++MI +
Sbjct: 242 TSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQN-GREEIALSMFREMIRCSI 300
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
+ +L+ C+++A L G QIHA K + V ALI +Y K G + A
Sbjct: 301 SPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARS 360
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
F+ + + +V+S ++I YA++G+GHEA+EL+++MK G PN VTF+S+L AC++ GL
Sbjct: 361 VFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGL 420
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
EG ++F+ + N + I +H++C++DL R + E A +I + P W +L
Sbjct: 421 VEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGK-NPDVIQWRTLL 479
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
AC I+G + E + + D P +++L+NIY +AG WDN + + + L+K
Sbjct: 480 NACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKK 539
Query: 571 NPGYSFL 577
P S++
Sbjct: 540 TPAMSWV 546
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 218/431 (50%), Gaps = 9/431 (2%)
Query: 2 NIVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
+++ ++ G+ K+A++ ++ L D T+ ++ + + R+ H +
Sbjct: 71 SMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVL 130
Query: 60 GYE-SNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLV 118
G+E S+ ++T ++ YAK G + AR FDR+ +++VV +TA+I GY Q G D AL V
Sbjct: 131 GFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEV 190
Query: 119 FSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
F M+ S ++ N++T +S L +C + L G++I G + K + +++LL +Y+K
Sbjct: 191 FEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSK 250
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
C +ED+ +F + V+W + I GL G + + +FR M+R + P+ FT SI
Sbjct: 251 CNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSI 310
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
L A L QIH + +KLG++ + + +LI +Y K G++ A ++ S+ + D+
Sbjct: 311 LHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDV 370
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMG--IDDVILCLMLNICANVASLNLGRQI 356
+S +I +A+ + EA +LF+ M KK+G + V +L C N + G QI
Sbjct: 371 VSINTMIYAYAQ-NGFGHEALELFERM--KKLGHKPNVVTFISILLACNNAGLVEEGCQI 427
Query: 357 HAFAFKYQS-SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGY 415
+ S +ID+ ++ +A +E + +VI W +L+ HG
Sbjct: 428 FSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGKNPDVIQWRTLLNACKIHGE 487
Query: 416 GHEAIELYKKM 426
A + KKM
Sbjct: 488 VEMAEKFMKKM 498
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 166/477 (34%), Positives = 260/477 (54%), Gaps = 33/477 (6%)
Query: 133 TYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI 192
YS+ +++C + R LQ G+ + I+ FV LF+ + LL++YAKC + D+ LF+ +
Sbjct: 72 VYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEM 131
Query: 193 ERKDVVSWNAMIGGLAMQGF-------------NDDSFW------------------LFR 221
+D+ SWN +I G A G D+ W LFR
Sbjct: 132 PERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFR 191
Query: 222 SMMR-QGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKY 280
M R K + FT+ S L A+ L +IH I++ GL+S + +L D+Y K
Sbjct: 192 MMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKC 251
Query: 281 GSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLM 340
GSI A ++ M+ DI++ TA+I + +D KE FDLF D++ + ++ +
Sbjct: 252 GSIEEARHIFDKMVDRDIVTWTAMIDRYFQD-GRRKEGFDLFADLLRSGIRPNEFTFSGV 310
Query: 341 LNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNV 400
LN CAN S LG+++H + + + +AL+ MY+K G + A R F E ++
Sbjct: 311 LNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDL 370
Query: 401 ISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTD 460
SWTSLIAGYA++G EAI ++ + G P+ +TF+ +L AC+H GL +G + F
Sbjct: 371 FSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHS 430
Query: 461 MINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTS 520
+ +Y + A+H++C++DL AR GQ + A N+I +M++KP LW+++LG C I+GN
Sbjct: 431 IKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLK 490
Query: 521 LGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
L + AA LF++EPE YV L+NIY AG W K RK M++R + K PG S++
Sbjct: 491 LAQRAAEALFEIEPENPATYVTLANIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWI 547
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 210/418 (50%), Gaps = 35/418 (8%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
S Y +L+Q CI + +Q +H HI +G+ L + +++ YAK ++ ++K FD
Sbjct: 71 SVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDE 130
Query: 91 MPERNVVSW-------------------------------TAMISGYAQNGYDENALLVF 119
MPER++ SW TAMISGY ++ AL +F
Sbjct: 131 MPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELF 190
Query: 120 SAMLRS-GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
M RS ++N+FT SSAL A A + L+ G+ I G I + + V SAL D+Y K
Sbjct: 191 RMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGK 250
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
CG IE+A +F+++ +D+V+W AMI G + F LF ++R G++P+ FT +
Sbjct: 251 CGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGV 310
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
L A ++H + ++G + + +L+ +Y+K G++ SA ++++ + D+
Sbjct: 311 LNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDL 370
Query: 299 ISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQ-IH 357
S T+LI+G+A+ + EA F+ ++ D + +L+ CA+ ++ G H
Sbjct: 371 FSWTSLIAGYAQ-NGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFH 429
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK-NVISWTSLIAGYAKHG 414
+ +Y ++ A +ID+ A+SG+ +A +M K + W SL+ G HG
Sbjct: 430 SIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHG 487
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 147/395 (37%), Positives = 242/395 (61%), Gaps = 1/395 (0%)
Query: 188 LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIE 247
+FE + ++D+VSWN +I G A G ++D+ + R M ++PD FTL S+L +
Sbjct: 152 VFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVN 211
Query: 248 LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG 307
L+K +IH I+ G ++ + SLID+YAK + + +++ + + D IS ++I+G
Sbjct: 212 LLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAG 271
Query: 308 FARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSY 367
++ E F+ M++ K+ + V ++ CA++ +L+LG+Q+H + + +
Sbjct: 272 CVQNGMFD-EGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDG 330
Query: 368 DAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMK 427
+ + +AL+DMYAK G I A FD+M +++SWT++I GYA HG+ ++AI L+K+M+
Sbjct: 331 NVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRME 390
Query: 428 HEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQL 487
EG+ PN V F+++L ACSH GL E W+ F M YRI+P EH++ V DL R G+L
Sbjct: 391 VEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRL 450
Query: 488 ESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIY 547
E AY I M+I+PT S+WS +L AC ++ N L E ++ LF ++P+ YV+LSNIY
Sbjct: 451 EEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIY 510
Query: 548 TAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+AAG W +ARK R M ++ ++K P S+++ K
Sbjct: 511 SAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNK 545
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 183/346 (52%), Gaps = 7/346 (2%)
Query: 83 SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA 142
S RK F+ MP+R++VSW +ISG AQNG E+AL++ M + +R + FT SS L A
Sbjct: 148 SLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFA 207
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
L G+ I G + + ++F+ S+L+D+YAKC ++D+ +F + + D +SWN+
Sbjct: 208 EYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNS 267
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
+I G G D+ F+ M+ +KP+ + SI+ A L Q+H II+
Sbjct: 268 IIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSR 327
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
+ + + +L+D+YAK G+IR+A ++ M D++S TA+I G+A H+ +A LF
Sbjct: 328 FDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYAL-HGHAYDAISLF 386
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDAAVGNALIDMYAK 381
K M ++ + + V +L C++ ++ + ++ Y+ A+ D+ +
Sbjct: 387 KRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGR 446
Query: 382 SGEIADANRAFDEMGDKNVIS-WTSLIAGYAKHGYGHEAIELYKKM 426
G + +A +M + S W++L+A H+ IEL +K+
Sbjct: 447 VGRLEEAYEFISDMHIEPTGSVWSTLLAACRV----HKNIELAEKV 488
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 155/299 (51%), Gaps = 11/299 (3%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITN 59
++ N + G + AL + L P ++ S+L + + IH + I N
Sbjct: 166 TVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRN 225
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
GY++++ + + +I YAK V + + F +P+ + +SW ++I+G QNG + L F
Sbjct: 226 GYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFF 285
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
ML + ++ N ++SS + ACA + L G+ + G I + RF N+F+ SAL+D+YAKC
Sbjct: 286 QQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKC 345
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G I A +F+++E D+VSW AMI G A+ G D+ LF+ M +G+KP+ ++L
Sbjct: 346 GNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVL 405
Query: 240 RA-SVGGI--ELMKI--SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
A S G+ E K S D I GLE ++ D+ + G + AY+ M
Sbjct: 406 TACSHAGLVDEAWKYFNSMTQDYRIIPGLEH----YAAVADLLGRVGRLEEAYEFISDM 460
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 67/341 (19%), Positives = 136/341 (39%), Gaps = 64/341 (18%)
Query: 223 MMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGS 282
M+ G PD S+L++ +L +H II+LG+ +L+++Y+K+ S
Sbjct: 1 MLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWS 60
Query: 283 IRSAYQLYRSMLKTDIISCTALISGFA--RDDNHSKEAFDLFKDMILKKMGID-DVILCL 339
+ + ++ G R+ + DL ++ + GID + L
Sbjct: 61 LEEG--------GVQRFCDSKMLGGIPEPREIGKCSNSHDLPCELDERVAGIDQNGDLNQ 112
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE----IADANRAFDEM 395
M NI V + Y+ +D + D+Y+K + + + F+ M
Sbjct: 113 MSNILYQVNT-------------YKKVFDEGKTS---DVYSKKEKESYYLGSLRKVFEMM 156
Query: 396 GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGW 455
++++SW ++I+G A++G +A+ + ++M + + P+ T S+L + +G
Sbjct: 157 PKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGK 216
Query: 456 EL------------------FTDMINK----------YRILPRAEHFS--CVVDLFARRG 485
E+ DM K + +LP+ + S ++ + G
Sbjct: 217 EIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNG 276
Query: 486 QLESAYNMIRQM---NIKPTASLWSAILGACSIYGNTSLGE 523
+ +QM IKP +S+I+ AC+ LG+
Sbjct: 277 MFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGK 317
>gi|357118938|ref|XP_003561204.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Brachypodium distachyon]
Length = 618
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 180/539 (33%), Positives = 282/539 (52%), Gaps = 49/539 (9%)
Query: 76 AKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYS 135
A G V AR+ FDR P+R+VVSWTA+++ YA G +A +F R R N T++
Sbjct: 46 AAAGRVSDARRLFDRTPDRDVVSWTALVAAYACQGMLHDARALFD---RPDARRNVVTWT 102
Query: 136 SALRACARMRWLQGGRMIQGSIQKGRFVE-NLFVKSALLDLYAKCGWIEDAWILFERIER 194
+ L AR GR+ + GR E N+ + +L+ Y G + DA LF +
Sbjct: 103 ALLSGYAR-----AGRVDEAEALFGRMPERNVVSWNTMLEAYTSSGRVGDACTLFNGMPV 157
Query: 195 KDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQI 254
+D SWN ++ L G D + LF M + + + I R+ +++
Sbjct: 158 RDAGSWNILLAALVRSGNIDKARKLFDRMPERNVMAWTTMVAGIARSG-------SVNEA 210
Query: 255 HDLIIKLGLESSNKLT-GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN 313
L G+ N ++ ++I YA+ I A+ L+ M DI S +I+GF ++ N
Sbjct: 211 RALFD--GMPERNVVSWNAMISGYARNHMIDEAHDLFMKMPTRDIASWNIMITGFIQNKN 268
Query: 314 ------------------------------HSKEAFDLFKDMILKKMGIDDVILCLMLNI 343
S+ A LF M++ + + V ++
Sbjct: 269 LERAQELFDKMPRRNVVTWTTMMNGYLQSIQSETALQLFNGMLIDGIRPNQVTFLGAVDA 328
Query: 344 CANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISW 403
C+N+A L+ G+Q+H K +D + + L+++YAK GEI A + F+ +K+VISW
Sbjct: 329 CSNLAGLSEGQQVHQMICKTPFQFDTFIESTLMNLYAKCGEIILARKVFNLSKEKDVISW 388
Query: 404 TSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMIN 463
+IA YA HG G EAI LY+KM+ G PNDVT++ LL ACSH+GL EG +F M+
Sbjct: 389 NGMIAAYAHHGVGLEAIHLYEKMQENGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVK 448
Query: 464 KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGE 523
I R EH++C++DL +R G+L A +I + ++P++++W+A+LG C+ +GN S+G+
Sbjct: 449 DRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGD 508
Query: 524 LAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
LAARNL + EP + Y +L NIY +AG W A K R M +R L+K PG S+++ + K
Sbjct: 509 LAARNLLEAEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGLKKQPGCSWIEVANK 567
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 175/402 (43%), Gaps = 57/402 (14%)
Query: 69 TKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAM------ 122
T ++ YA+ G V A F RMPERNVVSW M+ Y +G +A +F+ M
Sbjct: 102 TALLSGYARAGRVDEAEALFGRMPERNVVSWNTMLEAYTSSGRVGDACTLFNGMPVRDAG 161
Query: 123 -----LRSGVRANQFTYSSAL--RACAR--MRW--LQGGRMIQGSIQKGRFV------EN 165
L + VR+ + L R R M W + G GS+ + R + N
Sbjct: 162 SWNILLAALVRSGNIDKARKLFDRMPERNVMAWTTMVAGIARSGSVNEARALFDGMPERN 221
Query: 166 LFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL------------------ 207
+ +A++ YA+ I++A LF ++ +D+ SWN MI G
Sbjct: 222 VVSWNAMISGYARNHMIDEAHDLFMKMPTRDIASWNIMITGFIQNKNLERAQELFDKMPR 281
Query: 208 --------AMQGF-----NDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQI 254
M G+ ++ + LF M+ G++P+ T + A L + Q+
Sbjct: 282 RNVVTWTTMMNGYLQSIQSETALQLFNGMLIDGIRPNQVTFLGAVDACSNLAGLSEGQQV 341
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH 314
H +I K + + +L+++YAK G I A +++ + D+IS +I+ +A
Sbjct: 342 HQMICKTPFQFDTFIESTLMNLYAKCGEIILARKVFNLSKEKDVISWNGMIAAYAH-HGV 400
Query: 315 SKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS-SYDAAVGN 373
EA L++ M +DV +L+ C++ ++ G +I + K +S +
Sbjct: 401 GLEAIHLYEKMQENGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYT 460
Query: 374 ALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHG 414
LID+ +++G + DA R + + + W +L+ G HG
Sbjct: 461 CLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGGCNSHG 502
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 104/242 (42%), Gaps = 62/242 (25%)
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMIS----------------- 104
E N+ T ++ A+ G V AR FD MPERNVVSW AMIS
Sbjct: 188 ERNVMAWTTMVAGIARSGSVNEARALFDGMPERNVVSWNAMISGYARNHMIDEAHDLFMK 247
Query: 105 --------------GYAQ--------------------------NGY-----DENALLVF 119
G+ Q NGY E AL +F
Sbjct: 248 MPTRDIASWNIMITGFIQNKNLERAQELFDKMPRRNVVTWTTMMNGYLQSIQSETALQLF 307
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
+ ML G+R NQ T+ A+ AC+ + L G+ + I K F + F++S L++LYAKC
Sbjct: 308 NGMLIDGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTPFQFDTFIESTLMNLYAKC 367
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G I A +F + KDV+SWN MI A G ++ L+ M G KP+ T +L
Sbjct: 368 GEIILARKVFNLSKEKDVISWNGMIAAYAHHGVGLEAIHLYEKMQENGYKPNDVTYVGLL 427
Query: 240 RA 241
A
Sbjct: 428 SA 429
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 93/186 (50%), Gaps = 10/186 (5%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T++ + C + + +H I ++ + + + ++ YAK G+++ ARK F+
Sbjct: 321 TFLGAVDACSNLAGLSEGQQVHQMICKTPFQFDTFIESTLMNLYAKCGEIILARKVFNLS 380
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
E++V+SW MI+ YA +G A+ ++ M +G + N TY L AC+ + G
Sbjct: 381 KEKDVISWNGMIAAYAHHGVGLEAIHLYEKMQENGYKPNDVTYVGLLSACSHSGLVDEGL 440
Query: 152 MIQGSIQKGRFVENLFVK----SALLDLYAKCGWIEDA--WILFERIERKDVVSWNAMIG 205
I + K R ++ V+ + L+DL ++ G + DA I F ++E V WNA++G
Sbjct: 441 RIFEYMVKDR---SIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTV-WNALLG 496
Query: 206 GLAMQG 211
G G
Sbjct: 497 GCNSHG 502
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 358 AFAFKYQSSYDAAVGNALIDM------YAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
A AF Y S+ V N + D A +G ++DA R FD D++V+SWT+L+A YA
Sbjct: 18 AAAFFYDSAAAVDVSNHVQDPNRRVAELAAAGRVSDARRLFDRTPDRDVVSWTALVAAYA 77
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRA 471
G H+A L+ + N VT+ +LL + G E LF M + +
Sbjct: 78 CQGMLHDARALFDRPDAR---RNVVTWTALLSGYARAGRVDEAEALFGRMPERNVV---- 130
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
++ +++ + G++ A + M ++ S W+ +L A GN AR LFD
Sbjct: 131 -SWNTMLEAYTSSGRVGDACTLFNGMPVRDAGS-WNILLAALVRSGNID----KARKLFD 184
Query: 532 MEPEKSV-NYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
PE++V + + +G+ + AR M ER++
Sbjct: 185 RMPERNVMAWTTMVAGIARSGSVNEARALFDGMPERNV 222
>gi|242059059|ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
gi|241930650|gb|EES03795.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
Length = 894
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 170/561 (30%), Positives = 312/561 (55%), Gaps = 33/561 (5%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYA-KVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
+HAH++ +G + + +KVI YA + D++ A K F+++ W ++ G AQ+
Sbjct: 330 LHAHLVVSGLHNCQYAMSKVIRSYALQQSDLVFAHKVFEQIESPTTFLWNTLLRGLAQSD 389
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
++A++ + G++ + T+ L+ACA+ + G + + K F+ ++FV +
Sbjct: 390 APKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKTYAPKEGEQMHSHVIKLGFLLDIFVSN 449
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
+L+ LYA CG + A +F+ + KDVVSWN++IGG + + + LF M + ++
Sbjct: 450 SLIHLYAACGDLVCARSIFDEMLVKDVVSWNSLIGGYSQRNRFKEVLALFELMQAEEVQA 509
Query: 231 DCFTLGSILRA-------SVGGIELMKISQIH------------DLIIKLG-LESSNKL- 269
D T+ ++ A S+ + I + H D ++G L+S+ K+
Sbjct: 510 DKVTMVKVISACTHLGDWSMADCMVRYIERNHIEVDVYLGNTLIDYYCRIGQLQSAEKVF 569
Query: 270 ----------TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
++I YAK G++ SA +++ + D+IS +++I +++ +H ++
Sbjct: 570 SQMKDKNTVTLNAMIHAYAKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQA-SHFSDSL 628
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMY 379
+LF+ M K+ D V++ +L+ CA++ +L+LG+ IH + + D + N+LIDM+
Sbjct: 629 ELFRQMQRAKVKPDAVVIASVLSACAHLGALDLGKWIHDYVRRNNIKTDTIMENSLIDMF 688
Query: 380 AKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFL 439
AK G + +A + F EM +K+ +SW S+I G A +G+ EA+ ++ M EG PN+VTFL
Sbjct: 689 AKCGCMQEALQVFTEMEEKDTLSWNSIILGLANNGFEDEALNIFYSMLTEGPRPNEVTFL 748
Query: 440 SLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
+L AC++ L EG + F M + + P+ +H+ CVV + +R GQLE A N I +M +
Sbjct: 749 GVLIACANKRLVQEGLDHFERMKTVHNLEPQMKHYGCVVGILSRAGQLEKAKNFINEMPL 808
Query: 500 KPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKT 559
P +W +LGAC +GN ++ E+A + L +++P S +Y++LSNIY +A W +A
Sbjct: 809 APDPVVWRILLGACKTHGNVAVAEVATKKLSELDPSNSGDYMLLSNIYASADRWSDALNV 868
Query: 560 RKLMEERSLRKNPGYSFLQSS 580
R+ M + ++RK+P S + S+
Sbjct: 869 RQWMADTAVRKSPACSVVDSA 889
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 182/306 (59%), Gaps = 2/306 (0%)
Query: 273 LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI 332
+I +A +G I A L+ M +++S T LI G+ R ++ EA LF+ M+ +
Sbjct: 12 VITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYA-EAVALFRHMMAGGISP 70
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAF 392
++ + ++ +N+ + +G +H + K DA VGN+LID+YAK G + ++ + F
Sbjct: 71 SEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKIGSVQNSLKVF 130
Query: 393 DEMGDK-NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLT 451
DEM D+ N++SWTS+I+G+A HG EA+EL+ +M+ G+ PN +TFLS++ ACSH GL
Sbjct: 131 DEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRITFLSVINACSHGGLV 190
Query: 452 CEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILG 511
+G F M+ +Y I P +HF C++D+ R G+L A +I + ++ +W +LG
Sbjct: 191 EQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVEVNVIVWRILLG 250
Query: 512 ACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKN 571
CS YG +G+ A + + D+E E ++ VLSN+ G + +A + RKL++ER + K
Sbjct: 251 CCSKYGEVEMGKRAIKMISDLERESGGDFAVLSNVLNELGRFSDAEQARKLLDERKIVKV 310
Query: 572 PGYSFL 577
PG + +
Sbjct: 311 PGLALV 316
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 137/563 (24%), Positives = 261/563 (46%), Gaps = 51/563 (9%)
Query: 49 AHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPE-RNVVSWTAMISGYA 107
++H + + G S+ + +I YAK+G V ++ K FD M + RN+VSWT++ISG+A
Sbjct: 91 GEMLHGYCVKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLVSWTSIISGFA 150
Query: 108 QNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL-QGGRMIQGSIQKGRFVENL 166
+G AL +F+ M R+G+R N+ T+ S + AC+ + QG + + + +
Sbjct: 151 MHGLSVEALELFAEMRRAGIRPNRITFLSVINACSHGGLVEQGLAFFKSMVYEYNIDPEI 210
Query: 167 FVKSALLDLYAKCGWIEDAWILFERIERK-DVVSWNAMIGGLAMQG---FNDDSFWLFRS 222
++D+ + G + +A + E + + +V+ W ++G + G + +
Sbjct: 211 KHFGCIIDMLGRAGRLCEAEQIIEGLPVEVNVIVWRILLGCCSKYGEVEMGKRAIKMISD 270
Query: 223 MMRQGMKPDCFTLGSILR--------------------ASVGGIELM---------KISQ 253
+ R+ D L ++L V G+ L+ + +
Sbjct: 271 LERES-GGDFAVLSNVLNELGRFSDAEQARKLLDERKIVKVPGLALVVTRSFVMMEAVKK 329
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYA-KYGSIRSAYQLYRSMLKTDIISCTALISGFARDD 312
+H ++ GL + +I YA + + A++++ + L+ G A+ D
Sbjct: 330 LHAHLVVSGLHNCQYAMSKVIRSYALQQSDLVFAHKVFEQIESPTTFLWNTLLRGLAQSD 389
Query: 313 NHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG 372
K+A +K K M D++ +L CA + G Q+H+ K D V
Sbjct: 390 A-PKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKTYAPKEGEQMHSHVIKLGFLLDIFVS 448
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
N+LI +YA G++ A FDEM K+V+SW SLI GY++ E + L++ M+ E +
Sbjct: 449 NSLIHLYAACGDLVCARSIFDEMLVKDVVSWNSLIGGYSQRNRFKEVLALFELMQAEEVQ 508
Query: 433 PNDVTFLSLLFACSHTGLTCEGWELFTDM---INKYRILPRAEHFSCVVDLFARRGQLES 489
+ VT + ++ AC+H G W + M I + I + ++D + R GQL+S
Sbjct: 509 ADKVTMVKVISACTHLG----DWSMADCMVRYIERNHIEVDVYLGNTLIDYYCRIGQLQS 564
Query: 490 AYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKS-VNYVVLSNIYT 548
A + QM K T +L +A++ A + GN ++A+ +FD P K +++ + Y+
Sbjct: 565 AEKVFSQMKDKNTVTL-NAMIHAYAKGGNL----VSAKKIFDQIPNKDLISWSSMICAYS 619
Query: 549 AAGAWDNARKTRKLMEERSLRKN 571
A + ++ + + M+ ++ +
Sbjct: 620 QASHFSDSLELFRQMQRAKVKPD 642
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/456 (25%), Positives = 215/456 (47%), Gaps = 52/456 (11%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITN 59
++R ++ K A+ F + + P T+ +L+ C A ++ +H+H+I
Sbjct: 380 TLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKTYAPKEGEQMHSHVIKL 439
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G+ ++ +S +I YA GD++ AR FD M ++VVSW ++I GY+Q + L +F
Sbjct: 440 GFLLDIFVSNSLIHLYAACGDLVCARSIFDEMLVKDVVSWNSLIGGYSQRNRFKEVLALF 499
Query: 120 SAMLRSGVRANQFTYSSALRACARM----------RWLQ----------GGRMIQ----- 154
M V+A++ T + AC + R+++ G +I
Sbjct: 500 ELMQAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIERNHIEVDVYLGNTLIDYYCRI 559
Query: 155 GSIQKGRFV------ENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G +Q V +N +A++ YAK G + A +F++I KD++SW++MI +
Sbjct: 560 GQLQSAEKVFSQMKDKNTVTLNAMIHAYAKGGNLVSAKKIFDQIPNKDLISWSSMICAYS 619
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRAS--VGGIELMKISQIHDLIIKLGLESS 266
DS LFR M R +KPD + S+L A +G ++L K IHD + + +++
Sbjct: 620 QASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAHLGALDLGK--WIHDYVRRNNIKTD 677
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ SLID++AK G ++ A Q++ M + D +S ++I G A ++ EA ++F M+
Sbjct: 678 TIMENSLIDMFAKCGCMQEALQVFTEMEEKDTLSWNSIILGLA-NNGFEDEALNIFYSML 736
Query: 327 LKKMGIDDVILCLMLNICANVASLNLG-------RQIHAFAFKYQSSYDAAVGNALIDMY 379
+ ++V +L CAN + G + +H + + Y VG +
Sbjct: 737 TEGPRPNEVTFLGVLIACANKRLVQEGLDHFERMKTVHNLEPQMK-HYGCVVG-----IL 790
Query: 380 AKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHG 414
+++G++ A +EM + + W L+ HG
Sbjct: 791 SRAGQLEKAKNFINEMPLAPDPVVWRILLGACKTHG 826
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 122/479 (25%), Positives = 236/479 (49%), Gaps = 38/479 (7%)
Query: 71 VIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
VI +A G++ AR FD+MP RNVVSWT +I GY + A+ +F M+ G+ +
Sbjct: 12 VITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALFRHMMAGGISPS 71
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILF- 189
+ T + + A + + + G M+ G K + + V ++L+DLYAK G ++++ +F
Sbjct: 72 EITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFD 131
Query: 190 ERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIEL 248
E ++R+++VSW ++I G AM G + ++ LF M R G++P+ T S++ A S GG+
Sbjct: 132 EMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRITFLSVINACSHGGLVE 191
Query: 249 MKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALISG 307
++ ++ + ++ K G +ID+ + G + A Q+ + ++ ++I L+
Sbjct: 192 QGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVEVNVIVWRILLGC 251
Query: 308 FAR--DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI--------- 356
++ + K A + D+ ++ G D +L +LN + R++
Sbjct: 252 CSKYGEVEMGKRAIKMISDL-ERESGGDFAVLSNVLNELGRFSDAEQARKLLDERKIVKV 310
Query: 357 --------HAF----AFKYQSSYDAAVG--------NALIDMYA-KSGEIADANRAFDEM 395
+F A K ++ G + +I YA + ++ A++ F+++
Sbjct: 311 PGLALVVTRSFVMMEAVKKLHAHLVVSGLHNCQYAMSKVIRSYALQQSDLVFAHKVFEQI 370
Query: 396 GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGW 455
W +L+ G A+ +AI YKK + +GM P+++TF +L AC+ T EG
Sbjct: 371 ESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKTYAPKEGE 430
Query: 456 ELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACS 514
++ + +I K L + ++ L+A G L A ++ +M +K S W++++G S
Sbjct: 431 QMHSHVI-KLGFLLDIFVSNSLIHLYAACGDLVCARSIFDEMLVKDVVS-WNSLIGGYS 487
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 149/275 (54%), Gaps = 11/275 (4%)
Query: 163 VENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRS 222
++N+ + ++ +A G IE A +LF+++ ++VVSW +I G ++ LFR
Sbjct: 3 MKNVVSWNVVITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALFRH 62
Query: 223 MMRQGMKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKY 280
MM G+ P T+ +++ A ++GGI + ++ +H +K G+ S ++ SLID+YAK
Sbjct: 63 MMAGGISPSEITVLAVVPAISNLGGILMGEM--LHGYCVKKGIMSDARVGNSLIDLYAKI 120
Query: 281 GSIRSAYQLYRSML-KTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCL 339
GS++++ +++ ML + +++S T++ISGFA S EA +LF +M + + +
Sbjct: 121 GSVQNSLKVFDEMLDRRNLVSWTSIISGFAM-HGLSVEALELFAEMRRAGIRPNRITFLS 179
Query: 340 MLNICANVASLNLGRQ-IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-D 397
++N C++ + G + ++Y + +IDM ++G + +A + + + +
Sbjct: 180 VINACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVE 239
Query: 398 KNVISWTSLIAGYAKHG---YGHEAIELYKKMKHE 429
NVI W L+ +K+G G AI++ ++ E
Sbjct: 240 VNVIVWRILLGCCSKYGEVEMGKRAIKMISDLERE 274
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 80/145 (55%), Gaps = 1/145 (0%)
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
N +I +A GEI A FD+M +NV+SWT LI GY + EA+ L++ M G+
Sbjct: 10 NVVITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALFRHMMAGGIS 69
Query: 433 PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYN 492
P+++T L+++ A S+ G G E+ K I+ A + ++DL+A+ G ++++
Sbjct: 70 PSEITVLAVVPAISNLGGILMG-EMLHGYCVKKGIMSDARVGNSLIDLYAKIGSVQNSLK 128
Query: 493 MIRQMNIKPTASLWSAILGACSIYG 517
+ +M + W++I+ +++G
Sbjct: 129 VFDEMLDRRNLVSWTSIISGFAMHG 153
>gi|57899214|dbj|BAD87363.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|222619954|gb|EEE56086.1| hypothetical protein OsJ_04925 [Oryza sativa Japonica Group]
Length = 566
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 177/535 (33%), Positives = 288/535 (53%), Gaps = 7/535 (1%)
Query: 53 HAHIITNGYE-SNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
HA G+ SN +T ++ FY + + A+ FD+MP R V+W +I G+AQ+
Sbjct: 34 HAAATKLGFSASNPFANTALLAFYCRSRRLREAQHLFDQMPLRTAVTWNTLIYGHAQSTA 93
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ A+ F+ M+R+GV + SS L AC R+ G M+ + F ++ V +A
Sbjct: 94 PDLAVAAFARMVRAGVSPTASSVSSVLVACVRLENAGAGAMLHSVGLRCGFFASVVVGTA 153
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+D+YAKC + A +F +E K+V ++ A++ G + D+ L R M R G+ P+
Sbjct: 154 LVDMYAKCRRLGAAQQVFGEMEEKNVATFTALVTGFVLSRRPHDAVLLVREMERSGVAPN 213
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
T S+L + ++ Q+H ++K GLE + +L+ +Y+K G ++
Sbjct: 214 LMTYSSLLSSFASPEDIDHGKQVHCAVLKKGLEHDPFVLSALVTMYSKCGIWEDFVKVQM 273
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
S+ D +S ++ISG + KEAF F +M +D +L + +SL
Sbjct: 274 SVSCQDQVSFNSVISGLS-CLGRGKEAFQHFLEMRRHGTDMDVFTFASILKAIGSSSSLL 332
Query: 352 LGRQIHAFAFK--YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
GRQ+H K Y S D V N+LI MYA+ G I ++N F M N++SW SL++G
Sbjct: 333 EGRQVHTLILKIGYDSVVD--VQNSLISMYARHGAIGESNGVFISMEAPNLVSWNSLMSG 390
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK-YRIL 468
A+HG+G E +E++++M+ + P+ +TFLS+L ACSH GL +G E F M +K Y +
Sbjct: 391 CAQHGHGKEVVEMFEQMRRLHVQPDHITFLSVLTACSHVGLVDKGLEYFNLMKDKGYLVG 450
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARN 528
R +H++C+VDL R G L A +I M IKP AS++ A+L AC I+GN + ++
Sbjct: 451 ARTKHYACMVDLLGRAGYLNEAEYLINGMPIKPGASVYRALLSACQIHGNLEIAIRVSKR 510
Query: 529 LFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKN 583
L ++ P S +V LSN + G W NA + R+ M + + K P +S ++ ++
Sbjct: 511 LMELNPHDSSVHVQLSNAFAGDGRWGNAAEIRETMSGKGIVKEPSWSRIEDQMQH 565
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 208/401 (51%), Gaps = 8/401 (1%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
S+ S+L C+ + ++H+ + G+ +++ + T ++ YAK + +A++ F
Sbjct: 114 SSVSSVLVACVRLENAGAGAMLHSVGLRCGFFASVVVGTALVDMYAKCRRLGAAQQVFGE 173
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
M E+NV ++TA+++G+ + +A+L+ M RSGV N TYSS L + A + G
Sbjct: 174 MEEKNVATFTALVTGFVLSRRPHDAVLLVREMERSGVAPNLMTYSSLLSSFASPEDIDHG 233
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ + ++ K + FV SAL+ +Y+KCG ED + + +D VS+N++I GL+
Sbjct: 234 KQVHCAVLKKGLEHDPFVLSALVTMYSKCGIWEDFVKVQMSVSCQDQVSFNSVISGLSCL 293
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
G ++F F M R G D FT SIL+A L++ Q+H LI+K+G +S +
Sbjct: 294 GRGKEAFQHFLEMRRHGTDMDVFTFASILKAIGSSSSLLEGRQVHTLILKIGYDSVVDVQ 353
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
SLI +YA++G+I + ++ SM +++S +L+SG A+ H KE ++F+ M +
Sbjct: 354 NSLISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGCAQ-HGHGKEVVEMFEQMRRLHV 412
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN----ALIDMYAKSGEIA 386
D + +L C++V ++ G + F Y ++D+ ++G +
Sbjct: 413 QPDHITFLSVLTACSHVGLVDKG--LEYFNLMKDKGYLVGARTKHYACMVDLLGRAGYLN 470
Query: 387 DANRAFDEMGDKNVIS-WTSLIAGYAKHGYGHEAIELYKKM 426
+A + M K S + +L++ HG AI + K++
Sbjct: 471 EAEYLINGMPIKPGASVYRALLSACQIHGNLEIAIRVSKRL 511
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 91/189 (48%), Gaps = 3/189 (1%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
T +D T+ S+L+ + + +H I+ GY+S + + +I YA+ G + +
Sbjct: 311 TDMDVFTFASILKAIGSSSSLLEGRQVHTLILKIGYDSVVDVQNSLISMYARHGAIGESN 370
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
F M N+VSW +++SG AQ+G+ + + +F M R V+ + T+ S L AC+ +
Sbjct: 371 GVFISMEAPNLVSWNSLMSGCAQHGHGKEVVEMFEQMRRLHVQPDHITFLSVLTACSHVG 430
Query: 146 WLQGGRMIQGSIQKGRFVENLFVK--SALLDLYAKCGWIEDAWILFERIERKDVVS-WNA 202
+ G ++ ++ K + ++DL + G++ +A L + K S + A
Sbjct: 431 LVDKGLEYFNLMKDKGYLVGARTKHYACMVDLLGRAGYLNEAEYLINGMPIKPGASVYRA 490
Query: 203 MIGGLAMQG 211
++ + G
Sbjct: 491 LLSACQIHG 499
>gi|218189824|gb|EEC72251.1| hypothetical protein OsI_05387 [Oryza sativa Indica Group]
Length = 566
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 181/557 (32%), Positives = 295/557 (52%), Gaps = 8/557 (1%)
Query: 32 TYMSLLQFCIDKKAERQA-HLIHAHIITNGYE-SNLHLSTKVIIFYAKVGDVLSARKAFD 89
T + +Q D+ A HA G+ SN +T ++ FY + + A+ FD
Sbjct: 12 TPRAFVQLLADQPPRPSAADQCHAAATKLGFSASNPFANTALLAFYCRSRRLREAQHLFD 71
Query: 90 RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG 149
+MP R V+W +I G+AQ+ + A+ F+ M+R+GV + SS L AC R+
Sbjct: 72 QMPLRTAVTWNTLIYGHAQSTAPDLAVAAFARMVRAGVSPTASSVSSVLVACVRLENAGA 131
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
G M+ + F ++ V +AL+D+YAKC + A +F +E K+V ++ A++ G +
Sbjct: 132 GAMLHSVGLRCGFFASVVVGTALVDMYAKCRRLGAAQQVFGEMEEKNVATFTALVTGFVL 191
Query: 210 QGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
D+ L R M R G+ P+ T S+L + ++ Q+H ++K GLE +
Sbjct: 192 SRRPHDAVLLVREMERSGVAPNLMTYSSLLSSFASPEDIDHGKQVHCAVLKKGLEHDPFV 251
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+L+ +Y+K G ++ S+ D +S ++ISG + KEAF F +M
Sbjct: 252 LSALVTMYSKCGIWEDFVKVQMSVSCQDQVSFNSVISGLS-CLGRGKEAFQHFLEMRRHG 310
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFK--YQSSYDAAVGNALIDMYAKSGEIAD 387
+D +L + +SL GRQ+H K Y S D V N+LI MYA+ G I +
Sbjct: 311 TDMDVFTFASILKAIGSSSSLLEGRQVHTLILKIGYDSVVD--VQNSLISMYARHGAIGE 368
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
+N F M N++SW SL++G A+HG+G E +E++++M+ + P+ +TFLS+L ACSH
Sbjct: 369 SNGVFISMEAPNLVSWNSLMSGCAQHGHGKEVVEMFEQMRRLHVQPDHITFLSVLTACSH 428
Query: 448 TGLTCEGWELFTDMINK-YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
GL +G E F M +K Y + R +H++C+VDL R G L A +I M IKP AS++
Sbjct: 429 VGLVDKGLEYFNLMKDKGYLVGARTKHYACMVDLLGRAGYLNEAEYLINGMPIKPGASVY 488
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
A+L AC I+GN + ++ L ++ P S +V LSN + G W NA + R+ M +
Sbjct: 489 RALLSACQIHGNLEIAIRVSKRLMELNPHDSSVHVQLSNAFAGDGRWGNAAEIRETMSGK 548
Query: 567 SLRKNPGYSFLQSSKKN 583
+ K P +S ++ ++
Sbjct: 549 GIVKEPSWSRIEDQMQH 565
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 208/401 (51%), Gaps = 8/401 (1%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
S+ S+L C+ + ++H+ + G+ +++ + T ++ YAK + +A++ F
Sbjct: 114 SSVSSVLVACVRLENAGAGAMLHSVGLRCGFFASVVVGTALVDMYAKCRRLGAAQQVFGE 173
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
M E+NV ++TA+++G+ + +A+L+ M RSGV N TYSS L + A + G
Sbjct: 174 MEEKNVATFTALVTGFVLSRRPHDAVLLVREMERSGVAPNLMTYSSLLSSFASPEDIDHG 233
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ + ++ K + FV SAL+ +Y+KCG ED + + +D VS+N++I GL+
Sbjct: 234 KQVHCAVLKKGLEHDPFVLSALVTMYSKCGIWEDFVKVQMSVSCQDQVSFNSVISGLSCL 293
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
G ++F F M R G D FT SIL+A L++ Q+H LI+K+G +S +
Sbjct: 294 GRGKEAFQHFLEMRRHGTDMDVFTFASILKAIGSSSSLLEGRQVHTLILKIGYDSVVDVQ 353
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
SLI +YA++G+I + ++ SM +++S +L+SG A+ H KE ++F+ M +
Sbjct: 354 NSLISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGCAQ-HGHGKEVVEMFEQMRRLHV 412
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN----ALIDMYAKSGEIA 386
D + +L C++V ++ G + F Y ++D+ ++G +
Sbjct: 413 QPDHITFLSVLTACSHVGLVDKG--LEYFNLMKDKGYLVGARTKHYACMVDLLGRAGYLN 470
Query: 387 DANRAFDEMGDKNVIS-WTSLIAGYAKHGYGHEAIELYKKM 426
+A + M K S + +L++ HG AI + K++
Sbjct: 471 EAEYLINGMPIKPGASVYRALLSACQIHGNLEIAIRVSKRL 511
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 91/189 (48%), Gaps = 3/189 (1%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
T +D T+ S+L+ + + +H I+ GY+S + + +I YA+ G + +
Sbjct: 311 TDMDVFTFASILKAIGSSSSLLEGRQVHTLILKIGYDSVVDVQNSLISMYARHGAIGESN 370
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
F M N+VSW +++SG AQ+G+ + + +F M R V+ + T+ S L AC+ +
Sbjct: 371 GVFISMEAPNLVSWNSLMSGCAQHGHGKEVVEMFEQMRRLHVQPDHITFLSVLTACSHVG 430
Query: 146 WLQGGRMIQGSIQKGRFVENLFVK--SALLDLYAKCGWIEDAWILFERIERKDVVS-WNA 202
+ G ++ ++ K + ++DL + G++ +A L + K S + A
Sbjct: 431 LVDKGLEYFNLMKDKGYLVGARTKHYACMVDLLGRAGYLNEAEYLINGMPIKPGASVYRA 490
Query: 203 MIGGLAMQG 211
++ + G
Sbjct: 491 LLSACQIHG 499
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 154/464 (33%), Positives = 263/464 (56%), Gaps = 10/464 (2%)
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
MLR G++ + FT+ ++AC+ +R + G I + K + +F+ ++L+ +Y KC
Sbjct: 1 MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
E + +F+ + K+ VSW+A+IG + F LFR M+ +G +P + G+IL A
Sbjct: 61 YELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRP---SRGAILNA 117
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC 301
+ ++ ++++ GL+ + + ++A+ G + A +L+ ++ D+++
Sbjct: 118 MACVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTW 177
Query: 302 TALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF-- 359
I + + D EA L K M+L+ + D + L ++ C+ +AS L +H
Sbjct: 178 ATTIEAYVKAD-MPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIIT 236
Query: 360 -AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHE 418
F Y AV ALID+Y K G + A + FD M ++N+I+W+++I+GY HG+G E
Sbjct: 237 TGFFYNQLL--AVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGRE 294
Query: 419 AIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVV 478
A+ L+ +MK + P+ +TF+S+L ACSH+GL EGWE F M + + PR EH++C+V
Sbjct: 295 ALNLFDQMK-ASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMV 353
Query: 479 DLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSV 538
D+ R G+L+ A + I +M ++P A++W A+LGAC I+ N L E+ AR LFD++P +
Sbjct: 354 DILGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAG 413
Query: 539 NYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
YV+L NIYT G A R LM+ R ++K GYS ++ K
Sbjct: 414 RYVILYNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNK 457
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 179/366 (48%), Gaps = 10/366 (2%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IH ++ GY+S + +S +I Y K +R+ FD MP++N VSW+A+I Q+
Sbjct: 32 IHQDVVKFGYQSQVFISNSLITMYGKCDKYELSRQVFDEMPDKNAVSWSAIIGACLQDDR 91
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ +F ML G R ++ +A+ AC R + + + ++ G + V+SA
Sbjct: 92 CKEGFSLFRQMLSEGSRPSRGAILNAM-ACVRSHE-EADDVYRVVVENGLDFDQ-SVQSA 148
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
++A+CG +E A LF+ I KD+V+W I ++ L + MM QG+ PD
Sbjct: 149 AAGMFARCGRVEVARKLFDGIMSKDLVTWATTIEAYVKADMPLEALGLLKQMMLQGIFPD 208
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT--GSLIDVYAKYGSIRSAYQL 289
TL ++RA + +++ I II G + L +LID+Y K GS+ A ++
Sbjct: 209 AITLLGVIRA-CSTLASFQLAHIVHGIITTGFFYNQLLAVETALIDLYVKCGSLTYARKV 267
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ M + +II+ +A+ISG+ +EA +LF D + + D + +L+ C++
Sbjct: 268 FDGMQERNIITWSAMISGYGM-HGWGREALNLF-DQMKASVKPDHITFVSILSACSHSGL 325
Query: 350 LNLGRQ-IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK-NVISWTSLI 407
+ G + ++ A + + ++D+ ++G++ +A + M + N W +L+
Sbjct: 326 VAEGWECFNSMARDFGVTPRPEHYACMVDILGRAGKLDEACDFIERMPVRPNAAVWGALL 385
Query: 408 AGYAKH 413
H
Sbjct: 386 GACRIH 391
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 122/252 (48%), Gaps = 3/252 (1%)
Query: 44 KAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMI 103
++ +A ++ ++ NG + + + + +A+ G V ARK FD + +++V+W I
Sbjct: 122 RSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATTI 181
Query: 104 SGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFV 163
Y + AL + M+ G+ + T +RAC+ + Q ++ G I G F
Sbjct: 182 EAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIITTGFFY 241
Query: 164 ENLF-VKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRS 222
L V++AL+DLY KCG + A +F+ ++ +++++W+AMI G M G+ ++ LF
Sbjct: 242 NQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLF-D 300
Query: 223 MMRQGMKPDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYG 281
M+ +KPD T SIL A S G+ + + G+ + ++D+ + G
Sbjct: 301 QMKASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILGRAG 360
Query: 282 SIRSAYQLYRSM 293
+ A M
Sbjct: 361 KLDEACDFIERM 372
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 96/182 (52%), Gaps = 6/182 (3%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESN--LHLSTKVIIFYAKVGDVLSARK 86
D T + +++ C + + AH++H IIT G+ N L + T +I Y K G + ARK
Sbjct: 208 DAITLLGVIRACSTLASFQLAHIVHG-IITTGFFYNQLLAVETALIDLYVKCGSLTYARK 266
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FD M ERN+++W+AMISGY +G+ AL +F M ++ V+ + T+ S L AC+
Sbjct: 267 VFDGMQERNIITWSAMISGYGMHGWGREALNLFDQM-KASVKPDHITFVSILSACSHSGL 325
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSA-LLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMI 204
+ G S+ + V A ++D+ + G +++A ER+ R + W A++
Sbjct: 326 VAEGWECFNSMARDFGVTPRPEHYACMVDILGRAGKLDEACDFIERMPVRPNAAVWGALL 385
Query: 205 GG 206
G
Sbjct: 386 GA 387
>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 295/544 (54%), Gaps = 36/544 (6%)
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENA------ 115
+ N+ +I +K G ++ AR+ FD M E +V++WT +ISGY + G E A
Sbjct: 49 DGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDR 108
Query: 116 ------LLVFSAMLRSGVRANQFTYSSAL-RACARMRWLQGGRMIQGSIQKGRF------ 162
++ ++AM+ +R+N+ + + L + MI G Q GR
Sbjct: 109 VDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYL 168
Query: 163 -----VENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSF 217
N+ + ++ + A+CG IE+A LF+R+ +DV+SW AMI GL+ G D++
Sbjct: 169 FEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEAR 228
Query: 218 WLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVY 277
LF M + + + +++ + L + + + + + L S N + LI
Sbjct: 229 LLFDRMPER----NVVSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGLI--- 281
Query: 278 AKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI-LKKMGIDDVI 336
+ G +R A +L+ M K ++IS T +I+G ++ S+EA +F M+ +
Sbjct: 282 -QNGDLRRARKLFNEMPKKNVISWTTMITGCVQE-GESEEALKIFSRMLSTNGAKPNQGT 339
Query: 337 LCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE-- 394
+L C+N+A L G+Q+H K V +ALI+MY+K GE+ A + FD+
Sbjct: 340 FVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGM 399
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG 454
++++SW +IA YA HGYG EAI +K+M+ G P+DVT++ LL ACSH GL EG
Sbjct: 400 TSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEG 459
Query: 455 WELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACS 514
+ F +++ IL R +H++C+VDL R G+L+ A+ I ++ KP+A +W A+L C+
Sbjct: 460 LKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCN 519
Query: 515 IYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGY 574
++ N +G+ AA+ L ++EPE + Y++LSNIY + G W A + R M+++ L+K PG
Sbjct: 520 VHANVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKWREAARVRLKMKDKGLKKQPGC 579
Query: 575 SFLQ 578
S+++
Sbjct: 580 SWIE 583
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 11/207 (5%)
Query: 9 KTGQLKQALK-FS--LSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNL 65
+ G+ ++ALK FS LS + T++S+L C + + +H I Y+ +
Sbjct: 313 QEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDST 372
Query: 66 HLSTKVIIFYAKVGDVLSARKAFDR--MPERNVVSWTAMISGYAQNGYDENALLVFSAML 123
+ + +I Y+K G++ +ARK FD +R++VSW +I+ YA +GY + A+ F M
Sbjct: 373 FVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMR 432
Query: 124 RSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFV---ENLFVKSALLDLYAKCG 180
+SG + + TY L AC+ ++ G + K R + E+ + + L+DL + G
Sbjct: 433 KSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHY--ACLVDLCGRAG 490
Query: 181 WIEDAWILFERIERKDVVS-WNAMIGG 206
+++A+ ER+E K W A++ G
Sbjct: 491 RLKEAFGFIERLETKPSARVWGALLAG 517
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/476 (34%), Positives = 265/476 (55%), Gaps = 32/476 (6%)
Query: 134 YSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE 193
+S L++C ++ L GG+ + I ++ F+ + LL+ Y+K G + + +LF +
Sbjct: 65 FSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMP 124
Query: 194 RKDVVS-------------------------------WNAMIGGLAMQGFNDDSFWLFRS 222
R++V+S WNAMI GL FN + LF+
Sbjct: 125 RRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKE 184
Query: 223 MMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGS 282
M G PD FTLGS+LR G L+ ++H ++K G E S+ + SL +Y K GS
Sbjct: 185 MYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGS 244
Query: 283 IRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLN 342
+ +L +SM +++ LI+G A++ +E + + M + D + +L+
Sbjct: 245 LSDGEKLIKSMPIRTVVAWNTLIAGKAQN-GCPEEVLNQYNMMKMAGFRPDKITFVSVLS 303
Query: 343 ICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVIS 402
C+ +A+L G+QIHA K +S AV ++LI MY++SG + D+ +AF + + +V+
Sbjct: 304 ACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVL 363
Query: 403 WTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI 462
W+S+IA Y HG G EA+EL+ +M+ M N+VTFLSLL+ACSH+GL +G E F M+
Sbjct: 364 WSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMV 423
Query: 463 NKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLG 522
KY++ PR EH++CVVDL R G+LE A MIR M ++P +W +L AC ++ +
Sbjct: 424 KKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMA 483
Query: 523 ELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
E + + ++P + +YV+LSNI+ +A W N + RK M +RS+RK PG S+L+
Sbjct: 484 ERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLE 539
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 196/436 (44%), Gaps = 36/436 (8%)
Query: 11 GQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTK 70
G++KQA + + DPS + LLQ CI + +H+ IIT+G + +S
Sbjct: 45 GRIKQA--YDTFTSEIWSDPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNH 102
Query: 71 VIIFYAKVG-------------------------------DVLSARKAFDRMPERNVVSW 99
++ FY+K+G D+ SA+K FD M ERN+ +W
Sbjct: 103 LLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATW 162
Query: 100 TAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQK 159
AMI+G Q +++ AL +F M G ++FT S LR CA +R L G+ + + K
Sbjct: 163 NAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLK 222
Query: 160 GRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWL 219
F + V S+L +Y K G + D L + + + VV+WN +I G A G ++
Sbjct: 223 CGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQ 282
Query: 220 FRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAK 279
+ M G +PD T S+L A L + QIH +IK G S + SLI +Y++
Sbjct: 283 YNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSR 342
Query: 280 YGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCL 339
G + + + + D++ +++I+ + +EA +LF M KM ++V
Sbjct: 343 SGCLEDSIKAFVDRENFDVVLWSSMIAAYGF-HGRGEEALELFHQMEDLKMEANEVTFLS 401
Query: 340 MLNICANVASLNLGRQIHAFAF-KYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-D 397
+L C++ G + KY+ ++D+ ++G + +A M
Sbjct: 402 LLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQ 461
Query: 398 KNVISWTSLIAGYAKH 413
+ I W +L+A H
Sbjct: 462 PDGIIWKTLLAACKLH 477
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 166/497 (33%), Positives = 270/497 (54%), Gaps = 3/497 (0%)
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM 152
+ SW A + A+ + + AL ++ ML SG N FT+ A ++CA + G
Sbjct: 18 QNTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQ 77
Query: 153 IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE--RKDVVSWNAMIGGLAMQ 210
+ G + K FV+++L+ +Y KC I A +F+ R V +NA+I G ++
Sbjct: 78 LHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLN 137
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
D+ LFR M ++G+ + T+ ++ G I L + +H ++ GL+ +
Sbjct: 138 SRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVG 197
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
L+ +Y + GS+ A +L+ M + +I+ A+ISG+A++ + DL++ M +
Sbjct: 198 NCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQN-GLAGHVLDLYRKMEFTGI 256
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
D V L +L+ CA++ + GR++ ++ + NALI+MYA+ G + A
Sbjct: 257 VPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARA 316
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
FD M +KNVISWT++IAGY HG G A++L+ +M +P+ F+S+L ACSH GL
Sbjct: 317 IFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGL 376
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
T +G FT M Y + P EH+SCVVDL R G+LE A +I M+++P ++W A+L
Sbjct: 377 TEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALL 436
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
GAC I+ N L ELA + + EP YV+LSNI++ AG + + R +M ER L+K
Sbjct: 437 GACKIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKK 496
Query: 571 NPGYSFLQSSKKNILLL 587
PG S+++ + L L
Sbjct: 497 EPGCSYVEYQGRIHLFL 513
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 169/369 (45%), Gaps = 11/369 (2%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR-MPERNV-VSWTAMISGYAQN 109
+H H+I G E + T +I Y K + SARK FD RN+ V + A+I+GY+ N
Sbjct: 78 LHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLN 137
Query: 110 GYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK 169
+A+L+F M + GV N T + CA L G + + +L V
Sbjct: 138 SRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVG 197
Query: 170 SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
+ LL +Y +CG ++ A LF+ + K +++WNAMI G A G L+R M G+
Sbjct: 198 NCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIV 257
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
PD TL +L + ++ I G + L +LI++YA+ G++ A +
Sbjct: 258 PDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAI 317
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVAS 349
+ M + ++IS TA+I+G+ + A LF +MI D +L+ C++
Sbjct: 318 FDGMTEKNVISWTAIIAGYGM-HGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGL 376
Query: 350 LNLGRQIHAFAFKYQSSYDAAVG----NALIDMYAKSGEIADANRAFDEMG-DKNVISWT 404
G ++ F + Y G + ++D+ ++G + +A + M + + W
Sbjct: 377 TEKG--LYYFT-AMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWG 433
Query: 405 SLIAGYAKH 413
+L+ H
Sbjct: 434 ALLGACKIH 442
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 87/179 (48%), Gaps = 2/179 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
DP T + +L C A + I +G+ N L +I YA+ G+++ AR F
Sbjct: 259 DPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIF 318
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D M E+NV+SWTA+I+GY +G E A+ +F M+ S + + S L AC+ +
Sbjct: 319 DGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTE 378
Query: 149 GGRMIQGSIQKGRFVENLFVK-SALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIG 205
G ++++ ++ S ++DL + G +E+A L + D W A++G
Sbjct: 379 KGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLG 437
>gi|449453035|ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Cucumis sativus]
Length = 804
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 185/560 (33%), Positives = 296/560 (52%), Gaps = 8/560 (1%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS 83
PD++L +++++ C + R A H +I+ G E++ + + +I YAK G + S
Sbjct: 198 PDSVL----VLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRS 253
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
A F+ + R+ +WTAMIS Y GY + AL +F +M ++ V N T LR+C
Sbjct: 254 AEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTN 313
Query: 144 MRWLQGGRMIQGSIQKGRFVENL-FVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
+ L+ G+ + + K NL + LL+LYA + + I + + WN
Sbjct: 314 LSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNT 373
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
+I A +G ++ LF M +QG PD F+L S L AS EL QIH +IK
Sbjct: 374 LISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRP 433
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
+ SLI++Y+K G + AY ++ M +++ ++ISG +++ +S +A LF
Sbjct: 434 F-MDEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQN-GYSTKAISLF 491
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
M + I +V ++ C+++ L G+ IH + AL+DMYAK
Sbjct: 492 DLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETALVDMYAKC 551
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
G++ A R FD M +++V+SW+SLI+ Y HG E I L+ KM G+ PNDVT +++L
Sbjct: 552 GDLQTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVL 611
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
ACSH G EG F M + I P+ EHF C+VDL +R G L+ AY +I+ M P
Sbjct: 612 SACSHAGCVKEGMLFFNSM-RDFGIEPKREHFVCIVDLLSRAGDLDEAYEIIKLMPFPPG 670
Query: 503 ASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKL 562
AS+W A+L C I+ + + R L++++ + + +Y +LSNIY A G W+ + R +
Sbjct: 671 ASIWGALLNGCRIHQRMDIAKNIQRELWNIQTDDTGHYTLLSNIYAAGGEWNEFGEVRSM 730
Query: 563 MEERSLRKNPGYSFLQSSKK 582
M+ L+K P YS ++ KK
Sbjct: 731 MKGTGLKKVPAYSVVELGKK 750
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 145/494 (29%), Positives = 249/494 (50%), Gaps = 13/494 (2%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ S+L+ C +H II +G++ + ++T ++ Y ++G + SARK F M
Sbjct: 101 TFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPVVNTALLSVYGELGYLDSARKVFGEM 160
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P R++VSW+++IS +NG L F M+ G + + + AC + L+ +
Sbjct: 161 PLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAK 220
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
G I K + FV S+L+ +YAKCG + A I+FE + + +W AMI + G
Sbjct: 221 SAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGG 280
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS-NKLT 270
+ ++ LF SM + ++P+ T+ ILR+ L + +H ++IK L+++ + L
Sbjct: 281 YLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLG 340
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
+L+++YA ++ + I LIS +A+ KE DLF M +
Sbjct: 341 PTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYAQ-KGLLKETVDLFVRMQKQGF 399
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
D L L+ N L LG QIH K + D V N+LI+MY+K G + A
Sbjct: 400 MPDSFSLASSLSASGNEGELQLGLQIHGHVIK-RPFMDEYVFNSLINMYSKCGYVDLAYM 458
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
FD+M K V++W S+I+G +++GY +AI L+ M +V F+S++ ACSH G
Sbjct: 459 IFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGF 518
Query: 451 TCEG-W---ELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
+G W +L T + K + A +VD++A+ G L++A + M+ + S W
Sbjct: 519 LEKGKWIHHKLITCGVRKCIFIETA-----LVDMYAKCGDLQTAQRVFDNMSERSVVS-W 572
Query: 507 SAILGACSIYGNTS 520
S+++ + ++G S
Sbjct: 573 SSLISSYGVHGQIS 586
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 130/487 (26%), Positives = 257/487 (52%), Gaps = 19/487 (3%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HAHII ++ STK+I Y+++GD+ S+ F + W ++ + NG
Sbjct: 20 LHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLKSHVWNGC 79
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ A+ ++ ML ++AN +T+ S LRAC+ L G+ + G I K F + V +A
Sbjct: 80 YQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPVVNTA 139
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
LL +Y + G+++ A +F + +D+VSW+++I + G ++ FR M+ +G PD
Sbjct: 140 LLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGTPD 199
Query: 232 CFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
+ +++ A G + ++++++ H I+K G+E+ + SLI +YAK GS+RSA ++
Sbjct: 200 SVLVLTVVEA-CGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVF 258
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
++ + TA+IS + + KEA LF M ++ + V + ++L C N++ L
Sbjct: 259 ENVTYRSTSTWTAMISSYNL-GGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLL 317
Query: 351 NLGRQIHAFAFKYQSSYDA---AVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI 407
G+ +H K + DA +G L+++YA + + + E+G + + W +LI
Sbjct: 318 REGKSVHCVVIK--NDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLI 375
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRI 467
+ YA+ G E ++L+ +M+ +G +P+ + S L A + G G ++ +I +
Sbjct: 376 SVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKR--- 432
Query: 468 LPRAEH--FSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
P + F+ +++++++ G ++ AY + QM K + W++++ S G ++
Sbjct: 433 -PFMDEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVT-WNSMISGLSQNGYST----K 486
Query: 526 ARNLFDM 532
A +LFD+
Sbjct: 487 AISLFDL 493
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 355 QIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG 414
Q+HA D LI+ Y++ G++ + F + W L+ + +G
Sbjct: 19 QLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLKSHVWNG 78
Query: 415 YGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK-YRILPRAEH 473
EAI LY +M + + N TF S+L ACS G G + +I + + P
Sbjct: 79 CYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPVVN- 137
Query: 474 FSCVVDLFARRGQLESAYNMIRQMNIK 500
+ ++ ++ G L+SA + +M ++
Sbjct: 138 -TALLSVYGELGYLDSARKVFGEMPLR 163
>gi|449489376|ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g69350, mitochondrial-like
[Cucumis sativus]
Length = 804
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 185/560 (33%), Positives = 296/560 (52%), Gaps = 8/560 (1%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLS 83
PD++L +++++ C + R A H +I+ G E++ + + +I YAK G + S
Sbjct: 198 PDSVL----VLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRS 253
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
A F+ + R+ +WTAMIS Y GY + AL +F +M ++ V N T LR+C
Sbjct: 254 AEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTN 313
Query: 144 MRWLQGGRMIQGSIQKGRFVENL-FVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
+ L+ G+ + + K NL + LL+LYA + + I + + WN
Sbjct: 314 LSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNT 373
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
+I A +G ++ LF M +QG PD F+L S L AS EL QIH +IK
Sbjct: 374 LISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRP 433
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
+ SLI++Y+K G + AY ++ M +++ ++ISG +++ +S +A LF
Sbjct: 434 F-MDEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQN-GYSTKAISLF 491
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
M + I +V ++ C+++ L G+ IH + AL+DMYAK
Sbjct: 492 DLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETALVDMYAKC 551
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
G++ A R FD M +++V+SW+SLI+ Y HG E I L+ KM G+ PNDVT +++L
Sbjct: 552 GDLQTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVL 611
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
ACSH G EG F M + I P+ EHF C+VDL +R G L+ AY +I+ M P
Sbjct: 612 SACSHAGCVKEGMLFFNSM-RDFGIEPKREHFVCIVDLLSRAGDLDEAYEIIKLMPFPPG 670
Query: 503 ASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKL 562
AS+W A+L C I+ + + R L++++ + + +Y +LSNIY A G W+ + R +
Sbjct: 671 ASIWGALLNGCRIHQRMDIAKNIQRELWNIQTDDTGHYTLLSNIYAAGGEWNEFGEVRSM 730
Query: 563 MEERSLRKNPGYSFLQSSKK 582
M+ L+K P YS ++ KK
Sbjct: 731 MKGTGLKKVPAYSVVELGKK 750
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 145/494 (29%), Positives = 249/494 (50%), Gaps = 13/494 (2%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ S+L+ C +H II +G++ + ++T ++ Y ++G + SARK F M
Sbjct: 101 TFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPVVNTALLSVYGELGYLDSARKVFGEM 160
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P R++VSW+++IS +NG L F M+ G + + + AC + L+ +
Sbjct: 161 PLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAK 220
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
G I K + FV S+L+ +YAKCG + A I+FE + + +W AMI + G
Sbjct: 221 SAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGG 280
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS-NKLT 270
+ ++ LF SM + ++P+ T+ ILR+ L + +H ++IK L+++ + L
Sbjct: 281 YLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLG 340
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
+L+++YA ++ + I LIS +A+ KE DLF M +
Sbjct: 341 PTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYAQ-KGLLKETVDLFVRMQKQGF 399
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
D L L+ N L LG QIH K + D V N+LI+MY+K G + A
Sbjct: 400 MPDSFSLASSLSASGNEGELQLGLQIHGHVIK-RPFMDEYVFNSLINMYSKCGYVDLAYM 458
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
FD+M K V++W S+I+G +++GY +AI L+ M +V F+S++ ACSH G
Sbjct: 459 IFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGF 518
Query: 451 TCEG-W---ELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
+G W +L T + K + A +VD++A+ G L++A + M+ + S W
Sbjct: 519 LEKGKWIHHKLITCGVRKCIFIETA-----LVDMYAKCGDLQTAQRVFDNMSERSVVS-W 572
Query: 507 SAILGACSIYGNTS 520
S+++ + ++G S
Sbjct: 573 SSLISSYGVHGQIS 586
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 132/492 (26%), Positives = 259/492 (52%), Gaps = 19/492 (3%)
Query: 47 RQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGY 106
RQ +HAHII ++ STK+I Y+++GD+ S+ F + W ++ +
Sbjct: 15 RQLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLKSH 74
Query: 107 AQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENL 166
NG + A+ ++ ML ++AN +T+ S LRAC+ L G+ + G I K F +
Sbjct: 75 VWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDP 134
Query: 167 FVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ 226
V +ALL +Y + G+++ A +F + +D+VSW+++I + G ++ FR M+ +
Sbjct: 135 VVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSE 194
Query: 227 GMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRS 285
G PD + +++ A G + ++++++ H I+K G+E+ + SLI +YAK GS+RS
Sbjct: 195 GGTPDSVLVLTVVEA-CGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRS 253
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
A ++ ++ + TA+IS + + KEA LF M ++ + V + ++L C
Sbjct: 254 AEIVFENVTYRSTSTWTAMISSYNL-GGYLKEALALFVSMQKTEVEPNSVTMRIILRSCT 312
Query: 346 NVASLNLGRQIHAFAFKYQSSYDA---AVGNALIDMYAKSGEIADANRAFDEMGDKNVIS 402
N++ L G+ +H K + DA +G L+++YA + + + E+G + +
Sbjct: 313 NLSLLREGKSVHCVVIK--NDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAV 370
Query: 403 WTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI 462
W +LI+ YA+ G E ++L+ +M+ +G +P+ + S L A + G G ++ +I
Sbjct: 371 WNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVI 430
Query: 463 NKYRILPRAEH--FSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTS 520
+ P + F+ +++++++ G ++ AY + QM K + W++++ S G ++
Sbjct: 431 KR----PFMDEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVT-WNSMISGLSQNGYST 485
Query: 521 LGELAARNLFDM 532
A +LFD+
Sbjct: 486 ----KAISLFDL 493
>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
Length = 684
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 175/530 (33%), Positives = 290/530 (54%), Gaps = 10/530 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN--VVSWTAMISGYAQN 109
+HA ++ + S+ +L + YA+VG + +A P + +W A+++ ++
Sbjct: 34 LHALLVVS---SSQNLFPSLAAAYARVGALDAAESTLAASPSSRSCIPAWNALLAARSRA 90
Query: 110 GYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVK 169
G AL VF A L S R + T++ AL ACAR+ L ++ + ++FV
Sbjct: 91 GSPGAALRVFRA-LPSSARPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFVC 149
Query: 170 SALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
SALL +Y++CG + DA +F+ + RKD V+W+ M+ G G ++ ++ M G+
Sbjct: 150 SALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVA 209
Query: 230 PDCFTLGSILRA-SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQ 288
D + +++A ++ G M S +H ++ G+ + SL+D+YAK G A Q
Sbjct: 210 EDEVVMVGVIQACTLTGNTRMGAS-VHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQ 268
Query: 289 LYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
++R M + +S ALISGFA++ H+ EA DLF++M + D L L CA+V
Sbjct: 269 VFRMMPYRNAVSWNALISGFAQN-GHADEALDLFREMSTSGLQPDSGALVSALLACADVG 327
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA 408
L LG+ IH F + + + +G A++DMY+K G + A + F+++ ++++ W ++IA
Sbjct: 328 FLKLGKSIHGFILR-RLEFQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIA 386
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
HG GH+A+ L++++ G+ P+ TF SLL A SH+GL EG F MI ++ I
Sbjct: 387 CCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIE 446
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARN 528
P +H CVVDL AR G +E A M+ M+ +PT +W A+L C LGE A+
Sbjct: 447 PTEKHCVCVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSGCLNNKKLELGETIAKK 506
Query: 529 LFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+ + +PE ++SN+Y AA WD R+ RKLM++ +K PGYS ++
Sbjct: 507 ILESQPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIE 556
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 199/421 (47%), Gaps = 27/421 (6%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPSTYMSL-LQFCIDKKAERQAHLIHAHIITNGY 61
++ A + G AL+ + P + ST +L L C A + GY
Sbjct: 83 LLAARSRAGSPGAALRVFRALPSSARPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGY 142
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSA 121
++ + + ++ Y++ G + A + FD MP ++ V+W+ M++G+ G AL ++S
Sbjct: 143 GRDVFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSR 202
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVE-----NLFVKSALLDLY 176
M GV ++ ++AC L G + S+ GRF+ ++ + ++L+D+Y
Sbjct: 203 MREHGVAEDEVVMVGVIQACT----LTGNTRMGASVH-GRFLRHGMRMDVVIATSLVDMY 257
Query: 177 AKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLG 236
AK G + A +F + ++ VSWNA+I G A G D++ LFR M G++PD L
Sbjct: 258 AKNGHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALV 317
Query: 237 SILR--ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML 294
S L A VG ++L K IH I++ LE L +++D+Y+K GS+ SA +L+ +
Sbjct: 318 SALLACADVGFLKLGK--SIHGFILRR-LEFQCILGTAVLDMYSKCGSLESARKLFNKLS 374
Query: 295 KTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG- 353
D++ A+I+ +A LF+++ + D +L+ ++ + G
Sbjct: 375 SRDLVLWNAMIACCG-THGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGK 433
Query: 354 ----RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVIS-WTSLIA 408
R I F + + V +D+ A+SG + +AN M + I W +L++
Sbjct: 434 FWFDRMITEFGIEPTEKHCVCV----VDLLARSGLVEEANEMLASMHTEPTIPIWVALLS 489
Query: 409 G 409
G
Sbjct: 490 G 490
>gi|297736926|emb|CBI26127.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 176/565 (31%), Positives = 292/565 (51%), Gaps = 45/565 (7%)
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSA 121
S+L +T I+ AK+G + SAR+ FD MP ++ V+W AM++ Y+Q G + AL +F
Sbjct: 2 HSHLFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHH 61
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC-- 179
M + R ++FT+++ L ACA + L+ G I + +L V ++L+D+Y KC
Sbjct: 62 MRIANSRPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLS 121
Query: 180 -----------------------------GWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
G + A ++F+ + +K ++WN MI G
Sbjct: 122 ATSARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQC 181
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG-------L 263
G + LF+ M ++PD +T +++ A E +H IIK G
Sbjct: 182 GDVELCLGLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWDDVMKVF 241
Query: 264 ESSNKLT----GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
ES LT ++ID + K G A+ +++ + +++S T++I+G+AR+ H ++A
Sbjct: 242 ESIGILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARN-GHGEQAL 300
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMY 379
F M+ + DD +L+ C+++A+L G+ IH Y VGN L++MY
Sbjct: 301 SFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVNMY 360
Query: 380 AKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFL 439
AK G+I +N AF E+ K+++SW +++ G HG+ +A+ELY++M GM P+ VTF+
Sbjct: 361 AKCGDIQGSNTAFKEILGKDLVSWNAMLFGLGMHGHATQALELYEEMVASGMKPDKVTFI 420
Query: 440 SLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
LL CSH+GL +G LF M++ Y + EH C+VDL R G L A ++ + +
Sbjct: 421 GLLMTCSHSGLIEKGQALFESMVSVYGLSQETEHVVCMVDLLGRGGYLAQARELVDEYSR 480
Query: 500 --KPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNAR 557
+ SL A+LGAC + +G L EP+K ++YV+LSN+Y +G W A
Sbjct: 481 TGRAETSLPEALLGACFAHSEVRMGANLGEYLKVFEPQKEMSYVLLSNLYCVSGQWKEAE 540
Query: 558 KTRKLMEERSLRKNPGYSFLQSSKK 582
RK M + ++K PG S+++ K
Sbjct: 541 MVRKTMTDHGVKKMPGCSWIEVRNK 565
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 185/409 (45%), Gaps = 44/409 (10%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK-- 86
D T+ + L C R+ IHA ++ +G +S+L + +I Y K SAR+
Sbjct: 70 DRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRVF 129
Query: 87 -----------------------------AFDRMPERNVVSWTAMISGYAQNGYDENALL 117
FD MP++ ++W MISGY Q G E L
Sbjct: 130 EEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVELCLG 189
Query: 118 VFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKG------RFVENLFVKS- 170
+F M ++ +Q+T+S+ + A ++ G M+ G I K + E++ + +
Sbjct: 190 LFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWDDVMKVFESIGILTQ 249
Query: 171 ----ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ 226
A++D + K G +A+++F+ K+VVSW +MI G A G + + F MM
Sbjct: 250 VSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQALSFFVKMMEN 309
Query: 227 GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSA 286
++PD FT G++L A L IH II G + + L+++YAK G I+ +
Sbjct: 310 HIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVNMYAKCGDIQGS 369
Query: 287 YQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICAN 346
++ +L D++S A++ G H+ +A +L+++M+ M D V +L C++
Sbjct: 370 NTAFKEILGKDLVSWNAMLFGLGM-HGHATQALELYEEMVASGMKPDKVTFIGLLMTCSH 428
Query: 347 VASLNLGRQI-HAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE 394
+ G+ + + Y S + ++D+ + G +A A DE
Sbjct: 429 SGLIEKGQALFESMVSVYGLSQETEHVVCMVDLLGRGGYLAQARELVDE 477
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 91/190 (47%), Gaps = 5/190 (2%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ G +QAL F + + + P T+ ++L C +IH II G+ + +
Sbjct: 292 RNGHGEQALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVD 351
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ ++ YAK GD+ + AF + +++VSW AM+ G +G+ AL ++ M+ SG
Sbjct: 352 VGNGLVNMYAKCGDIQGSNTAFKEILGKDLVSWNAMLFGLGMHGHATQALELYEEMVASG 411
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQK--GRFVENLFVKSALLDLYAKCGWIED 184
++ ++ T+ L C+ ++ G+ + S+ G E V ++DL + G++
Sbjct: 412 MKPDKVTFIGLLMTCSHSGLIEKGQALFESMVSVYGLSQETEHV-VCMVDLLGRGGYLAQ 470
Query: 185 AWILFERIER 194
A L + R
Sbjct: 471 ARELVDEYSR 480
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,768,132,090
Number of Sequences: 23463169
Number of extensions: 344217113
Number of successful extensions: 941700
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8514
Number of HSP's successfully gapped in prelim test: 2754
Number of HSP's that attempted gapping in prelim test: 762583
Number of HSP's gapped (non-prelim): 59074
length of query: 590
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 442
effective length of database: 8,886,646,355
effective search space: 3927897688910
effective search space used: 3927897688910
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 80 (35.4 bits)