BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038522
(590 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LT48|PP244_ARATH Pentatricopeptide repeat-containing protein At3g20730
OS=Arabidopsis thaliana GN=PCMP-E94 PE=2 SV=1
Length = 565
Score = 564 bits (1454), Expect = e-160, Method: Compositional matrix adjust.
Identities = 284/555 (51%), Positives = 381/555 (68%), Gaps = 4/555 (0%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
LL PS Y+ L+ C + ++Q LIH + ITNG+ SNL L +I Y K GDV ARK
Sbjct: 10 LLSPSLYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARK 69
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FDR+ +R+VVSWTAMIS +++ GY +ALL+F M R V+ANQFTY S L++C +
Sbjct: 70 LFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGC 129
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
L+ G I GS++KG NL V+SALL LYA+CG +E+A + F+ ++ +D+VSWNAMI G
Sbjct: 130 LKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDG 189
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
D SF LF+ M+ +G KPDCFT GS+LRAS+ L +S++H L IKLG S
Sbjct: 190 YTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRS 249
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ L SL++ Y K GS+ +A++L+ K D++SCTALI+GF++ +N + +AFD+FKDMI
Sbjct: 250 SALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMI 309
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK-YQSSYDAAVGNALIDMYAKSGEI 385
K +D+V++ ML IC +AS+ +GRQIH FA K Q +D A+GN+LIDMYAKSGEI
Sbjct: 310 RMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEI 369
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
DA AF+EM +K+V SWTSLIAGY +HG +AI+LY +M+HE + PNDVTFLSLL AC
Sbjct: 370 EDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSAC 429
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMN--IKPTA 503
SHTG T GW+++ MINK+ I R EH SC++D+ AR G LE AY +IR + ++
Sbjct: 430 SHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSS 489
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
S W A L AC +GN L ++AA L MEP K VNY+ L+++Y A GAWDNA TRKLM
Sbjct: 490 STWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLM 549
Query: 564 EER-SLRKNPGYSFL 577
+E S K PGYS +
Sbjct: 550 KESGSCNKAPGYSLV 564
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 374 bits (961), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/553 (36%), Positives = 322/553 (58%), Gaps = 5/553 (0%)
Query: 34 MSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPE 93
+S+L+ C K Q +H +++ +G NL S +I Y K + L A K FD MPE
Sbjct: 10 VSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPE 69
Query: 94 RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMI 153
RNVVSW+A++SG+ NG + +L +FS M R G+ N+FT+S+ L+AC + L+ G I
Sbjct: 70 RNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQI 129
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN 213
G K F + V ++L+D+Y+KCG I +A +F RI + ++SWNAMI G G+
Sbjct: 130 HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYG 189
Query: 214 DDSFWLFRSMMRQGMK--PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE--SSNKL 269
+ F M +K PD FTL S+L+A + QIH +++ G SS +
Sbjct: 190 SKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATI 249
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
TGSL+D+Y K G + SA + + + + +IS ++LI G+A++ EA LFK +
Sbjct: 250 TGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFV-EAMGLFKRLQELN 308
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
ID L ++ + A+ A L G+Q+ A A K S + +V N+++DMY K G + +A
Sbjct: 309 SQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAE 368
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
+ F EM K+VISWT +I GY KHG G +++ ++ +M + P++V +L++L ACSH+G
Sbjct: 369 KCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSG 428
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
+ EG ELF+ ++ + I PR EH++CVVDL R G+L+ A ++I M IKP +W +
Sbjct: 429 MIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTL 488
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
L C ++G+ LG+ + L ++ + NYV++SN+Y AG W+ R+L + L+
Sbjct: 489 LSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLK 548
Query: 570 KNPGYSFLQSSKK 582
K G S+++ ++
Sbjct: 549 KEAGMSWVEIERE 561
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 206/407 (50%), Gaps = 23/407 (5%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ + L+ C A + IH + G+E + + ++ Y+K G + A K F R+
Sbjct: 109 TFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI 168
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV--RANQFTYSSALRACARMRWLQG 149
+R+++SW AMI+G+ GY AL F M + + R ++FT +S L+AC+ +
Sbjct: 169 VDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYA 228
Query: 150 GRMIQGSIQKGRF--VENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ I G + + F + + +L+DLY KCG++ A F++I+ K ++SW+++I G
Sbjct: 229 GKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGY 288
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKL--GLES 265
A +G ++ LF+ + + D F L SI+ L + Q+ L +KL GLE+
Sbjct: 289 AQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLET 348
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
S + S++D+Y K G + A + + M D+IS T +I+G+ + K++ +F +M
Sbjct: 349 S--VLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGK-HGLGKKSVRIFYEM 405
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQ-----IHAFAFKYQSSYDAAVGNALIDMYA 380
+ + D+V +L+ C++ + G + + K + + A V +D+
Sbjct: 406 LRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACV----VDLLG 461
Query: 381 KSGEIADANRAFDEMGDK-NVISWTSLIAGYAKHGYGHEAIELYKKM 426
++G + +A D M K NV W +L++ HG IEL K++
Sbjct: 462 RAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHG----DIELGKEV 504
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 373 bits (958), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/528 (35%), Positives = 309/528 (58%), Gaps = 2/528 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H I+ +G+ + ++ FY K V SARK FD M ER+V+SW ++I+GY NG
Sbjct: 217 LHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGL 276
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
E L VF ML SG+ + T S CA R + GR + K F +
Sbjct: 277 AEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNT 336
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
LLD+Y+KCG ++ A +F + + VVS+ +MI G A +G ++ LF M +G+ PD
Sbjct: 337 LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPD 396
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
+T+ ++L L + ++H+ I + L ++ +L+D+YAK GS++ A ++
Sbjct: 397 VYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFS 456
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL-KKMGIDDVILCLMLNICANVASL 350
M DIIS +I G++++ ++ EA LF ++ K+ D+ + +L CA++++
Sbjct: 457 EMRVKDIISWNTIIGGYSKN-CYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAF 515
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
+ GR+IH + + D V N+L+DMYAK G + A+ FD++ K+++SWT +IAGY
Sbjct: 516 DKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGY 575
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
HG+G EAI L+ +M+ G+ ++++F+SLL+ACSH+GL EGW F M ++ +I P
Sbjct: 576 GMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPT 635
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
EH++C+VD+ AR G L AY I M I P A++W A+L C I+ + L E A +F
Sbjct: 636 VEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVF 695
Query: 531 DMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
++EPE + YV+++NIY A W+ ++ RK + +R LRKNPG S+++
Sbjct: 696 ELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIE 743
Score = 225 bits (574), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 141/511 (27%), Positives = 266/511 (52%), Gaps = 6/511 (1%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLS 68
++G L+ A+K +DP T S+LQ C D K+ + + I NG+ + +L
Sbjct: 73 ESGNLENAVKLLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLG 132
Query: 69 TKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR 128
+K+ + Y GD+ A + FD + + W +++ A++G ++ +F M+ SGV
Sbjct: 133 SKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVE 192
Query: 129 ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWIL 188
+ +T+S ++ + +R + GG + G I K F E V ++L+ Y K ++ A +
Sbjct: 193 MDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKV 252
Query: 189 FERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIEL 248
F+ + +DV+SWN++I G G + +F M+ G++ D T+ S+ A L
Sbjct: 253 FDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVF-AGCADSRL 311
Query: 249 MKISQ-IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISG 307
+ + + +H + +K ++ +L+D+Y+K G + SA ++R M ++S T++I+G
Sbjct: 312 ISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAG 371
Query: 308 FARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSY 367
+AR + + EA LF++M + + D + +LN CA L+ G+++H + + +
Sbjct: 372 YAR-EGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF 430
Query: 368 DAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMK 427
D V NAL+DMYAK G + +A F EM K++ISW ++I GY+K+ Y +EA+ L+ +
Sbjct: 431 DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLL 490
Query: 428 HEG-MVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
E P++ T +L AC+ +G E+ ++ R S +VD++A+ G
Sbjct: 491 EEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS-LVDMYAKCGA 549
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYG 517
L A+ + + K S W+ ++ ++G
Sbjct: 550 LLLAHMLFDDIASKDLVS-WTVMIAGYGMHG 579
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 202/390 (51%), Gaps = 6/390 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D +T +S+ C D + +H+ + + ++ Y+K GD+ SA+
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 353
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F M +R+VVS+T+MI+GYA+ G A+ +F M G+ + +T ++ L CAR R L
Sbjct: 354 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLL 413
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ + I++ ++FV +AL+D+YAKCG +++A ++F + KD++SWN +IGG
Sbjct: 414 DEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGY 473
Query: 208 AMQGFNDDSFWLFRSMMRQG-MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
+ + +++ LF ++ + PD T+ +L A K +IH I++ G S
Sbjct: 474 SKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSD 533
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ SL+D+YAK G++ A+ L+ + D++S T +I+G+ KEA LF M
Sbjct: 534 RHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGM-HGFGKEAIALFNQMR 592
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN--ALIDMYAKSGE 384
+ D++ +L C++ ++ G + +++ + V + ++DM A++G+
Sbjct: 593 QAGIEADEISFVSLLYACSHSGLVDEGWRFFNI-MRHECKIEPTVEHYACIVDMLARTGD 651
Query: 385 IADANRAFDEMG-DKNVISWTSLIAGYAKH 413
+ A R + M + W +L+ G H
Sbjct: 652 LIKAYRFIENMPIPPDATIWGALLCGCRIH 681
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 369 bits (946), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/550 (35%), Positives = 319/550 (58%), Gaps = 7/550 (1%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
S Y SL+ K +Q IHA ++ G + + L TK+I + GD+ AR+ FD
Sbjct: 22 SFYASLIDSATHKAQLKQ---IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDD 78
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+P + W A+I GY++N + ++ALL++S M + V + FT+ L+AC+ + LQ G
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE--RIERKDVVSWNAMIGGLA 208
R + + + F ++FV++ L+ LYAKC + A +FE + + +VSW A++ A
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYA 198
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G ++ +F M + +KPD L S+L A +L + IH ++K+GLE
Sbjct: 199 QNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPD 258
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
L SL +YAK G + +A L+ M ++I A+ISG+A++ +++EA D+F +MI K
Sbjct: 259 LLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKN-GYAREAIDMFHEMINK 317
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ D + + ++ CA V SL R ++ + + D + +ALIDM+AK G + A
Sbjct: 318 DVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGA 377
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
FD D++V+ W+++I GY HG EAI LY+ M+ G+ PNDVTFL LL AC+H+
Sbjct: 378 RLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHS 437
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
G+ EGW F M + ++I P+ +H++CV+DL R G L+ AY +I+ M ++P ++W A
Sbjct: 438 GMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGA 496
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L AC + + LGE AA+ LF ++P + +YV LSN+Y AA WD + R M+E+ L
Sbjct: 497 LLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGL 556
Query: 569 RKNPGYSFLQ 578
K+ G S+++
Sbjct: 557 NKDVGCSWVE 566
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 205/425 (48%), Gaps = 24/425 (5%)
Query: 3 IVRANFKTGQLKQAL------KFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHI 56
I+R + + AL + + PD+ T+ LL+ C + +HA +
Sbjct: 90 IIRGYSRNNHFQDALLMYSNMQLARVSPDSF----TFPHLLKACSGLSHLQMGRFVHAQV 145
Query: 57 ITNGYESNLHLSTKVIIFYAKVGDVLSARKAFD--RMPERNVVSWTAMISGYAQNGYDEN 114
G+++++ + +I YAK + SAR F+ +PER +VSWTA++S YAQNG
Sbjct: 146 FRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPME 205
Query: 115 ALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQK-GRFVENLFVKSALL 173
AL +FS M + V+ + S L A ++ L+ GR I S+ K G +E + S L
Sbjct: 206 ALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS-LN 264
Query: 174 DLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCF 233
+YAKCG + A ILF++++ +++ WNAMI G A G+ ++ +F M+ + ++PD
Sbjct: 265 TMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTI 324
Query: 234 TLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
++ S + A L + +++ + + ++ +LID++AK GS+ A ++
Sbjct: 325 SITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRT 384
Query: 294 LKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG 353
L D++ +A+I G+ ++EA L++ M + +DV +L C + + G
Sbjct: 385 LDRDVVVWSAMIVGYGL-HGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG 443
Query: 354 ----RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIA 408
++ Q + A V ID+ ++G + A M V W +L++
Sbjct: 444 WWFFNRMADHKINPQQQHYACV----IDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLS 499
Query: 409 GYAKH 413
KH
Sbjct: 500 ACKKH 504
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 360 bits (923), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 188/538 (34%), Positives = 313/538 (58%), Gaps = 7/538 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+H ++ NG + + +S +I Y K G+V AR FD+ ++VV+W +MISGYA NG
Sbjct: 216 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
D AL +F +M + VR ++ +++S ++ CA ++ L+ + S+ K F+ + +++A
Sbjct: 276 DLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTA 335
Query: 172 LLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
L+ Y+KC + DA LF+ I +VVSW AMI G +++ LF M R+G++P
Sbjct: 336 LMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRP 395
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
+ FT IL A + ++ S++H ++K E S+ + +L+D Y K G + A +++
Sbjct: 396 NEFTYSVILTA----LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVF 451
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV-AS 349
+ DI++ +A+++G+A+ ++ A +F ++ + ++ +LN+CA AS
Sbjct: 452 SGIDDKDIVAWSAMLAGYAQT-GETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNAS 510
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
+ G+Q H FA K + V +AL+ MYAK G I A F +K+++SW S+I+G
Sbjct: 511 MGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISG 570
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
YA+HG +A++++K+MK + + VTF+ + AC+H GL EG + F M+ +I P
Sbjct: 571 YAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAP 630
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
EH SC+VDL++R GQLE A +I M +++W IL AC ++ T LG LAA +
Sbjct: 631 TKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKI 690
Query: 530 FDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKNILLL 587
M+PE S YV+LSN+Y +G W K RKLM ER+++K PGYS+++ K L
Sbjct: 691 IAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFL 748
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/492 (28%), Positives = 258/492 (52%), Gaps = 7/492 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D S + S+L+ E +H I G+ ++ + T ++ Y K + RK
Sbjct: 91 MDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKV 150
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD M ERNVV+WT +ISGYA+N ++ L +F M G + N FT+++AL A
Sbjct: 151 FDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVG 210
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G + + K + + V ++L++LY KCG + A ILF++ E K VV+WN+MI G
Sbjct: 211 GRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGY 270
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A G + ++ +F SM ++ + S+++ EL Q+H ++K G
Sbjct: 271 AANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQ 330
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ +L+ Y+K ++ A +L++ + +++S TA+ISGF ++D +EA DLF +M
Sbjct: 331 NIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDG-KEEAVDLFSEMK 389
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
K + ++ ++L ++ ++HA K + VG AL+D Y K G++
Sbjct: 390 RKGVRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVE 445
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
+A + F + DK++++W++++AGYA+ G AI+++ ++ G+ PN+ TF S+L C+
Sbjct: 446 EAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCA 505
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
T + + F K R+ S ++ ++A++G +ESA + ++ K S W
Sbjct: 506 ATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVS-W 564
Query: 507 SAILGACSIYGN 518
++++ + +G
Sbjct: 565 NSMISGYAQHGQ 576
Score = 193 bits (490), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 141/523 (26%), Positives = 261/523 (49%), Gaps = 43/523 (8%)
Query: 83 SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA 142
+A FD+ P R+ S+ +++ G++++G + A +F + R G+ + +SS L+ A
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 143 RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNA 202
+ GR + K F++++ V ++L+D Y K +D +F+ ++ ++VV+W
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFT----LGSILRASVGGIELMKISQIHDLI 258
+I G A ND+ LF M +G +P+ FT LG + VGG L Q+H ++
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGL----QVHTVV 220
Query: 259 IKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEA 318
+K GL+ + ++ SLI++Y K G++R A L+ +++ ++ISG+A + EA
Sbjct: 221 VKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA-NGLDLEA 279
Query: 319 FDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDM 378
+F M L + + + ++ +CAN+ L Q+H KY +D + AL+
Sbjct: 280 LGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVA 339
Query: 379 YAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVT 437
Y+K + DA R F E+G NV+SWT++I+G+ ++ EA++L+ +MK +G+ PN+ T
Sbjct: 340 YSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFT 399
Query: 438 FLSLLFACS-------HTGLTCEGWE----LFTDMINKYRILPRAEH----FSCVVDL-- 480
+ +L A H + +E + T +++ Y L + E FS + D
Sbjct: 400 YSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDI 459
Query: 481 ---------FARRGQLESAYNMIRQMN---IKPTASLWSAILGACSIYGNTSLGELAARN 528
+A+ G+ E+A M ++ IKP +S+IL C+ N S+G+ +
Sbjct: 460 VAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAAT-NASMGQGKQFH 518
Query: 529 LFDMEPEKSVNYVVLS---NIYTAAGAWDNARKTRKLMEERSL 568
F ++ + V S +Y G ++A + K E+ L
Sbjct: 519 GFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDL 561
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 4/188 (2%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPS--TYMSLLQFCIDKKAER-QAHLIHAHIITNGYESNL 65
+TG+ + A+K + P+ T+ S+L C A Q H I + +S+L
Sbjct: 471 QTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSL 530
Query: 66 HLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
+S+ ++ YAK G++ SA + F R E+++VSW +MISGYAQ+G AL VF M +
Sbjct: 531 CVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKR 590
Query: 126 GVRANQFTYSSALRACARMRWL-QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIED 184
V+ + T+ AC + +G + ++ + S ++DLY++ G +E
Sbjct: 591 KVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEK 650
Query: 185 AWILFERI 192
A + E +
Sbjct: 651 AMKVIENM 658
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 353 bits (905), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 188/556 (33%), Positives = 320/556 (57%), Gaps = 9/556 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY + + + K+ + ++H I+ + + + ++ ++ Y G V AR F
Sbjct: 116 DGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVF 175
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D M R+V+SW MISGY +NGY +AL++F M+ V + T S L C ++ L+
Sbjct: 176 DVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLE 235
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
GR + +++ R + + VK+AL+++Y KCG +++A +F+R+ER+DV++W MI G
Sbjct: 236 MGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYT 295
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G +++ L R M +G++P+ T+ S++ +++ +H ++ + S
Sbjct: 296 EDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDII 355
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ SLI +YAK + ++++ K +A+I+G +++ S +A LFK M +
Sbjct: 356 IETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVS-DALGLFKRMRRE 414
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFK--YQSSYDAAVGNALIDMYAKSGEIA 386
+ + L +L A +A L IH + K + SS DAA G L+ +Y+K G +
Sbjct: 415 DVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATG--LVHVYSKCGTLE 472
Query: 387 DANRAFDEMGDK----NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
A++ F+ + +K +V+ W +LI+GY HG GH A++++ +M G+ PN++TF S L
Sbjct: 473 SAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSAL 532
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
ACSH+GL EG LF M+ Y+ L R+ H++C+VDL R G+L+ AYN+I + +PT
Sbjct: 533 NACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPT 592
Query: 503 ASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKL 562
+++W A+L AC + N LGE+AA LF++EPE + NYV+L+NIY A G W + K R +
Sbjct: 593 STVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSM 652
Query: 563 MEERSLRKNPGYSFLQ 578
ME LRK PG+S ++
Sbjct: 653 MENVGLRKKPGHSTIE 668
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/491 (25%), Positives = 252/491 (51%), Gaps = 8/491 (1%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
Y SLL ++ + +H H+IT G S H+ + + + YA G + ARK F+ MP
Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVITGGRVSG-HILSTLSVTYALCGHITYARKLFEEMP 76
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR--ANQFTYSSALRACARMRWLQGG 150
+ +++S+ +I Y + G +A+ VF M+ GV+ + +TY +A ++ ++ G
Sbjct: 77 QSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLG 136
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
++ G I + F + +V++ALL +Y G +E A +F+ ++ +DV+SWN MI G
Sbjct: 137 LVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRN 196
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
G+ +D+ +F M+ + + D T+ S+L +L +H L+ + L ++
Sbjct: 197 GYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVK 256
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
+L+++Y K G + A ++ M + D+I+ T +I+G+ D + + A +L + M + +
Sbjct: 257 NALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGD-VENALELCRLMQFEGV 315
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
+ V + ++++C + +N G+ +H +A + Q D + +LI MYAK + R
Sbjct: 316 RPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFR 375
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
F + W+++IAG ++ +A+ L+K+M+ E + PN T SLL A +
Sbjct: 376 VFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALAD 435
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA---YNMIRQMNIKPTASLWS 507
+ + + K + + + +V ++++ G LESA +N I++ + LW
Sbjct: 436 LRQAMNIHC-YLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWG 494
Query: 508 AILGACSIYGN 518
A++ ++G+
Sbjct: 495 ALISGYGMHGD 505
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 188/393 (47%), Gaps = 9/393 (2%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD +T +S+L C K +H + + + ++ Y K G + AR
Sbjct: 216 LDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFV 275
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FDRM R+V++WT MI+GY ++G ENAL + M GVR N T +S + C +
Sbjct: 276 FDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKV 335
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ + G + + ++ ++++L+ +YAKC ++ + +F + W+A+I G
Sbjct: 336 NDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGC 395
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
D+ LF+ M R+ ++P+ TL S+L A +L + IH + K G SS
Sbjct: 396 VQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSL 455
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLK----TDIISCTALISGFA-RDDNHSKEAFDLF 322
L+ VY+K G++ SA++++ + + D++ ALISG+ D H+ A +F
Sbjct: 456 DAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHN--ALQVF 513
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK-YQSSYDAAVGNALIDMYAK 381
+M+ + +++ LN C++ + G + F + Y++ + ++D+ +
Sbjct: 514 MEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGR 573
Query: 382 SGEIADANRAFDEMG-DKNVISWTSLIAGYAKH 413
+G + +A + + W +L+A H
Sbjct: 574 AGRLDEAYNLITTIPFEPTSTVWGALLAACVTH 606
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 351 bits (900), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 189/585 (32%), Positives = 316/585 (54%), Gaps = 5/585 (0%)
Query: 2 NIVRANFKTGQLKQALKFSLSC--PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
+++ + GQ +A++ L D + D + S+++ C +HA +I
Sbjct: 138 SVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKL 197
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
S+L +I Y + + A + F +P ++++SW+++I+G++Q G++ AL
Sbjct: 198 ESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHL 257
Query: 120 SAMLRSGV-RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAK 178
ML GV N++ + S+L+AC+ + G I G K N +L D+YA+
Sbjct: 258 KEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYAR 317
Query: 179 CGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
CG++ A +F++IER D SWN +I GLA G+ D++ +F M G PD +L S+
Sbjct: 318 CGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSL 377
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT-D 297
L A + L + QIH IIK G + + SL+ +Y + + L+ D
Sbjct: 378 LCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNAD 437
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
+S +++ + + E LFK M++ + D + + +L C ++SL LG Q+H
Sbjct: 438 SVSWNTILTACLQHE-QPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVH 496
Query: 358 AFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGH 417
++ K + + + N LIDMYAK G + A R FD M +++V+SW++LI GYA+ G+G
Sbjct: 497 CYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGE 556
Query: 418 EAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV 477
EA+ L+K+MK G+ PN VTF+ +L ACSH GL EG +L+ M ++ I P EH SCV
Sbjct: 557 EALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCV 616
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKS 537
VDL AR G+L A I +M ++P +W +L AC GN L + AA N+ ++P S
Sbjct: 617 VDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNS 676
Query: 538 VNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+V+L +++ ++G W+NA R M++ ++K PG S+++ K
Sbjct: 677 TAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDK 721
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 144/526 (27%), Positives = 260/526 (49%), Gaps = 19/526 (3%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
TY+SL+ C ++ Q IH HI+ + + + L+ ++ Y K G + AR+ FD M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
PERN+VS+T++I+GY+QNG A+ ++ ML+ + +QF + S ++ACA + G+
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+ + K +L ++AL+ +Y + + DA +F I KD++SW+++I G + G
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 212 FNDDSFWLFRSMMRQGM-KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
F ++ + M+ G+ P+ + GS L+A + SQIH L IK L + N +
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSEL-AGNAIA 307
Query: 271 G-SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
G SL D+YA+ G + SA +++ + + D S +I+G A ++ ++ EA +F M
Sbjct: 308 GCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLA-NNGYADEAVSVFSQMRSSG 366
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
D + L +L +L+ G QIH++ K+ D V N+L+ MY ++
Sbjct: 367 FIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCF 426
Query: 390 RAFDEM-GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
F++ + + +SW +++ +H E + L+K M P+ +T +LL C
Sbjct: 427 NLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEI 486
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
G ++ + K + P + ++D++A+ G L A + M+ + S +
Sbjct: 487 SSLKLGSQVHCYSL-KTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTL 545
Query: 509 ILGACSIYGNTSLGELAARNLFDM-----EPEKSVNYVVLSNIYTA 549
I+G Y + GE A +M EP N+V + TA
Sbjct: 546 IVG----YAQSGFGEEALILFKEMKSAGIEP----NHVTFVGVLTA 583
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 349 bits (895), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 190/550 (34%), Positives = 291/550 (52%), Gaps = 1/550 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D +T SL+ C + +HA+ G+ SN + ++ YAK D+ +A F
Sbjct: 388 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 447
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
NVV W M+ Y N+ +F M + NQ+TY S L+ C R+ L+
Sbjct: 448 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 507
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G I I K F N +V S L+D+YAK G ++ AW + R KDVVSW MI G
Sbjct: 508 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 567
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
F+D + FR M+ +G++ D L + + A G L + QIH G S
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 627
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+L+ +Y++ G I +Y + D I+ AL+SGF + N ++EA +F M +
Sbjct: 628 FQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGN-NEEALRVFVRMNRE 686
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ ++ + + A++ G+Q+HA K + V NALI MYAK G I+DA
Sbjct: 687 GIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDA 746
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ F E+ KN +SW ++I Y+KHG+G EA++ + +M H + PN VT + +L ACSH
Sbjct: 747 EKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHI 806
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
GL +G F M ++Y + P+ EH+ CVVD+ R G L A I++M IKP A +W
Sbjct: 807 GLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRT 866
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L AC ++ N +GE AA +L ++EPE S YV+LSN+Y + WD TR+ M+E+ +
Sbjct: 867 LLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGV 926
Query: 569 RKNPGYSFLQ 578
+K PG S+++
Sbjct: 927 KKEPGQSWIE 936
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 155/527 (29%), Positives = 272/527 (51%), Gaps = 19/527 (3%)
Query: 30 PSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFD 89
P + S+L C ++ +H ++ G+ S+ ++ ++ Y +G+++SA F
Sbjct: 288 PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFS 347
Query: 90 RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQG 149
M +R+ V++ +I+G +Q GY E A+ +F M G+ + T +S + AC+ L
Sbjct: 348 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 407
Query: 150 GRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAM 209
G+ + K F N ++ ALL+LYAKC IE A F E ++VV WN M L
Sbjct: 408 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVM---LVA 464
Query: 210 QGFNDD---SFWLFRSMMRQGMKPDCFTLGSILRASV--GGIELMKISQIHDLIIKLGLE 264
G DD SF +FR M + + P+ +T SIL+ + G +EL + QIH IIK +
Sbjct: 465 YGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE--QIHSQIIKTNFQ 522
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ + LID+YAK G + +A+ + D++S T +I+G+ + N +A F+
Sbjct: 523 LNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQ-YNFDDKALTTFRQ 581
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M+ + + D+V L ++ CA + +L G+QIHA A S D NAL+ +Y++ G+
Sbjct: 582 MLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGK 641
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
I ++ AF++ + I+W +L++G+ + G EA+ ++ +M EG+ N+ TF S + A
Sbjct: 642 IEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKA 701
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
S T +G ++ +I K E + ++ ++A+ G + A +++ K S
Sbjct: 702 ASETANMKQGKQVHA-VITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVS 760
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSV--NYVVLSNIYTA 549
W+AI+ A S +G S A + FD +V N+V L + +A
Sbjct: 761 -WNAIINAYSKHGFGS----EALDSFDQMIHSNVRPNHVTLVGVLSA 802
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 130/469 (27%), Positives = 241/469 (51%), Gaps = 7/469 (1%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IHA I+ G + + +I Y++ G V AR+ FD + ++ SW AMISG ++N
Sbjct: 209 IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNEC 268
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ A+ +F M G+ + +SS L AC ++ L+ G + G + K F + +V +A
Sbjct: 269 EAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA 328
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPD 231
L+ LY G + A +F + ++D V++N +I GL+ G+ + + LF+ M G++PD
Sbjct: 329 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 388
Query: 232 CFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
TL S++ A L + Q+H KLG S+NK+ G+L+++YAK I +A +
Sbjct: 389 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 448
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLN 351
+++ ++ + D+ + +F +F+ M ++++ + +L C + L
Sbjct: 449 ETEVENVVLWNVMLVAYGLLDD-LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 507
Query: 352 LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYA 411
LG QIH+ K +A V + LIDMYAK G++ A K+V+SWT++IAGY
Sbjct: 508 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 567
Query: 412 KHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM-INKYRI-LP 469
++ + +A+ +++M G+ ++V + + AC+ EG ++ ++ + LP
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 627
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
+ +V L++R G++E +Y Q + W+A++ GN
Sbjct: 628 FQ---NALVTLYSRCGKIEESYLAFEQTEAGDNIA-WNALVSGFQQSGN 672
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 137/490 (27%), Positives = 245/490 (50%), Gaps = 19/490 (3%)
Query: 36 LLQFCIDKKAE-RQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
LL+ C+ + +H+ I+ G +SN LS K+ FY GD+ A K FD MPER
Sbjct: 90 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPER 149
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRM-- 152
+ +W MI A +F M+ V N+ T+S L AC +GG +
Sbjct: 150 TIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC------RGGSVAF 203
Query: 153 -----IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
I I ++ V + L+DLY++ G+++ A +F+ + KD SW AMI GL
Sbjct: 204 DVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGL 263
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI-SQIHDLIIKLGLESS 266
+ ++ LF M G+ P + S+L A IE ++I Q+H L++KLG S
Sbjct: 264 SKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSA-CKKIESLEIGEQLHGLVLKLGFSSD 322
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ +L+ +Y G++ SA ++ +M + D ++ LI+G ++ + ++A +LFK M
Sbjct: 323 TYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQ-CGYGEKAMELFKRMH 381
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
L + D L ++ C+ +L G+Q+HA+ K + + + AL+++YAK +I
Sbjct: 382 LDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIE 441
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A F E +NV+ W ++ Y + ++++M+ E +VPN T+ S+L C
Sbjct: 442 TALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCI 501
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
G G ++ + +I K A S ++D++A+ G+L++A++++ + K S W
Sbjct: 502 RLGDLELGEQIHSQII-KTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS-W 559
Query: 507 SAILGACSIY 516
+ ++ + Y
Sbjct: 560 TTMIAGYTQY 569
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 347 bits (891), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 197/583 (33%), Positives = 318/583 (54%), Gaps = 6/583 (1%)
Query: 9 KTGQLKQALK-FSLSCPDTL-LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K G L +K FS+ D + + T+ +L C K +H ++ +G +
Sbjct: 216 KCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGS 275
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ ++ Y+K G A K F M + V+W MISGY Q+G E +L F M+ SG
Sbjct: 276 IKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSG 335
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
V + T+SS L + ++ L+ + I I + ++F+ SAL+D Y KC + A
Sbjct: 336 VLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQ 395
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+F + DVV + AMI G G DS +FR +++ + P+ TL SIL +G +
Sbjct: 396 NIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPV-IGIL 454
Query: 247 ELMKIS-QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALI 305
+K+ ++H IIK G ++ + ++ID+YAK G + AY+++ + K DI+S ++I
Sbjct: 455 LALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMI 514
Query: 306 SGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS 365
+ A+ DN S A D+F+ M + + D V + L+ CAN+ S + G+ IH F K+
Sbjct: 515 TRCAQSDNPSA-AIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSL 573
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKK 425
+ D + LIDMYAK G + A F M +KN++SW S+IA HG +++ L+ +
Sbjct: 574 ASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHE 633
Query: 426 M-KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
M + G+ P+ +TFL ++ +C H G EG F M Y I P+ EH++CVVDLF R
Sbjct: 634 MVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRA 693
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLS 544
G+L AY ++ M P A +W +LGAC ++ N L E+A+ L D++P S YV++S
Sbjct: 694 GRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLIS 753
Query: 545 NIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKNILLL 587
N + A W++ K R LM+ER ++K PGYS+++ +K+ L +
Sbjct: 754 NAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFV 796
Score = 221 bits (562), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 142/518 (27%), Positives = 259/518 (50%), Gaps = 5/518 (0%)
Query: 2 NIVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
+I+ + + G L QAL F + C D ST+ L++ C+ K + + + +
Sbjct: 108 SIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSL 167
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G + N +++ +I Y + G + K FDR+ +++ V W M++GYA+ G ++ + F
Sbjct: 168 GMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGF 227
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
S M + N T+ L CA + G + G + +K++LL +Y+KC
Sbjct: 228 SVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKC 287
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G +DA LF + R D V+WN MI G G ++S F M+ G+ PD T S+L
Sbjct: 288 GRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLL 347
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDII 299
+ L QIH I++ + LT +LID Y K + A ++ D++
Sbjct: 348 PSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVV 407
Query: 300 SCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF 359
TA+ISG+ + + ++ ++F+ ++ K+ +++ L +L + + +L LGR++H F
Sbjct: 408 VFTAMISGYLHNGLY-IDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGF 466
Query: 360 AFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEA 419
K +G A+IDMYAK G + A F+ + ++++SW S+I A+ A
Sbjct: 467 IIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAA 526
Query: 420 IELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD 479
I+++++M G+ + V+ + L AC++ G + MI K+ + S ++D
Sbjct: 527 IDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMI-KHSLASDVYSESTLID 585
Query: 480 LFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
++A+ G L++A N+ + M K S W++I+ AC +G
Sbjct: 586 MYAKCGNLKAAMNVFKTMKEKNIVS-WNSIIAACGNHG 622
Score = 182 bits (461), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 124/487 (25%), Positives = 233/487 (47%), Gaps = 5/487 (1%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER- 94
LLQ C + RQ +HA +I N + + +++ YA G K F R+ R
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 95 -NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMI 153
++ W ++IS + +NG AL + ML GV + T+ ++AC ++ +G +
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN 213
++ N FV S+L+ Y + G I+ LF+R+ +KD V WN M+ G A G
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 214 DDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSL 273
D F M + P+ T +L + + Q+H L++ G++ + SL
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280
Query: 274 IDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGID 333
+ +Y+K G A +L+R M + D ++ +ISG+ + +E+ F +MI + D
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQ-SGLMEESLTFFYEMISSGVLPD 339
Query: 334 DVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFD 393
+ +L + +L +QIH + ++ S D + +ALID Y K ++ A F
Sbjct: 340 AITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFS 399
Query: 394 EMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCE 453
+ +V+ +T++I+GY +G +++E+++ + + PN++T +S+L
Sbjct: 400 QCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKL 459
Query: 454 GWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGAC 513
G EL +I K R V+D++A+ G++ AY + +++ + S W++++ C
Sbjct: 460 GRELHGFIIKK-GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVS-WNSMITRC 517
Query: 514 SIYGNTS 520
+ N S
Sbjct: 518 AQSDNPS 524
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 346 bits (888), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 190/559 (33%), Positives = 307/559 (54%), Gaps = 5/559 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D T+ SLL C H+ II NL + ++ YAK G + AR+
Sbjct: 426 IDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQI 485
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F+RM +R+ V+W +I Y Q+ + A +F M G+ ++ +S L+AC + L
Sbjct: 486 FERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGL 545
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ + K +L S+L+D+Y+KCG I+DA +F + VVS NA+I G
Sbjct: 546 YQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGY 605
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
+ +++ LF+ M+ +G+ P T +I+ A L +Q H I K G S
Sbjct: 606 SQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEG 664
Query: 268 KLTG-SLIDVYAKYGSIRSAYQLYRSMLKT-DIISCTALISGFARDDNHSKEAFDLFKDM 325
+ G SL+ +Y + A L+ + I+ T ++SG +++ + +EA +K+M
Sbjct: 665 EYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFY-EEALKFYKEM 723
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ D +L +C+ ++SL GR IH+ F D N LIDMYAK G++
Sbjct: 724 RHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDM 783
Query: 386 ADANRAFDEMGDK-NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+++ FDEM + NV+SW SLI GYAK+GY +A++++ M+ ++P+++TFL +L A
Sbjct: 784 KGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTA 843
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
CSH G +G ++F MI +Y I R +H +C+VDL R G L+ A + I N+KP A
Sbjct: 844 CSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDAR 903
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
LWS++LGAC I+G+ GE++A L ++EP+ S YV+LSNIY + G W+ A RK+M
Sbjct: 904 LWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMR 963
Query: 565 ERSLRKNPGYSFLQSSKKN 583
+R ++K PGYS++ ++
Sbjct: 964 DRGVKKVPGYSWIDVEQRT 982
Score = 249 bits (636), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 155/520 (29%), Positives = 278/520 (53%), Gaps = 14/520 (2%)
Query: 51 LIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
++HA I G SN+++ + ++ Y+K + +A K F+ + E+N V W AMI GYA NG
Sbjct: 348 VVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNG 407
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKS 170
+ +F M SG + FT++S L CA L+ G I K + +NLFV +
Sbjct: 408 ESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGN 467
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKP 230
AL+D+YAKCG +EDA +FER+ +D V+WN +IG ++F LF+ M G+
Sbjct: 468 ALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVS 527
Query: 231 DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLY 290
D L S L+A L + Q+H L +K GL+ SLID+Y+K G I+ A +++
Sbjct: 528 DGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVF 587
Query: 291 RSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
S+ + ++S ALI+G+++ N+ +EA LF++M+ + + ++ ++ C SL
Sbjct: 588 SSLPEWSVVSMNALIAGYSQ--NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESL 645
Query: 351 NLGRQIHAFAFKYQ-SSYDAAVGNALIDMYAKSGEIADANRAFDEMGD-KNVISWTSLIA 408
LG Q H K SS +G +L+ MY S + +A F E+ K+++ WT +++
Sbjct: 646 TLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMS 705
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
G++++G+ EA++ YK+M+H+G++P+ TF+++L CS EG + + + + L
Sbjct: 706 GHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDL 765
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARN 528
+ ++D++A+ G ++ + + +M + W++++ Y E A +
Sbjct: 766 DELTS-NTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLING---YAKNGYAEDALK- 820
Query: 529 LFDMEPEKSV--NYVVLSNIYTA---AGAWDNARKTRKLM 563
+FD + + + + + TA AG + RK ++M
Sbjct: 821 IFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMM 860
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 147/494 (29%), Positives = 245/494 (49%), Gaps = 6/494 (1%)
Query: 27 LLDPST--YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
++DP+T + L + +A L+ + G+ + VI Y ++G + A
Sbjct: 221 IVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDA 280
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
R F M +VV+W MISG+ + G + A+ F M +S V++ + T S L A +
Sbjct: 281 RLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIV 340
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
L G ++ K N++V S+L+ +Y+KC +E A +FE +E K+ V WNAMI
Sbjct: 341 ANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMI 400
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G A G + LF M G D FT S+L +L SQ H +IIK L
Sbjct: 401 RGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLA 460
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ + +L+D+YAK G++ A Q++ M D ++ +I + +D+N S EAFDLFK
Sbjct: 461 KNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENES-EAFDLFKR 519
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M L + D L L C +V L G+Q+H + K D G++LIDMY+K G
Sbjct: 520 MNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGI 579
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
I DA + F + + +V+S +LIAGY+++ EA+ L+++M G+ P+++TF +++ A
Sbjct: 580 IKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEA 638
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFS-CVVDLFARRGQLESAYNMIRQMNIKPTA 503
C G + F I K E+ ++ ++ + A + +++ +
Sbjct: 639 CHKPESLTLGTQ-FHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSI 697
Query: 504 SLWSAILGACSIYG 517
LW+ ++ S G
Sbjct: 698 VLWTGMMSGHSQNG 711
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 201/419 (47%), Gaps = 40/419 (9%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ +L C + IH +I G E N + ++ YAK + AR+ F+ +
Sbjct: 162 TFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWI 221
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
+ N V WT + SGY + G E A+LVF M G R + + +
Sbjct: 222 VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVT--------------- 266
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
+++ Y + G ++DA +LF + DVV+WN MI G +G
Sbjct: 267 --------------------VINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRG 306
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRA--SVGGIELMKISQIHDLIIKLGLESSNKL 269
+ F +M + +K TLGS+L A V ++L + +H IKLGL S+ +
Sbjct: 307 CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLV--VHAEAIKLGLASNIYV 364
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
SL+ +Y+K + +A +++ ++ + + + A+I G+A + S + +LF DM
Sbjct: 365 GSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAH-NGESHKVMELFMDMKSSG 423
Query: 330 MGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADAN 389
IDD +L+ CA L +G Q H+ K + + + VGNAL+DMYAK G + DA
Sbjct: 424 YNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDAR 483
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+ F+ M D++ ++W ++I Y + EA +L+K+M G+V + S L AC+H
Sbjct: 484 QIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHV 542
Score = 182 bits (462), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 127/468 (27%), Positives = 219/468 (46%), Gaps = 39/468 (8%)
Query: 45 AERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMIS 104
A R +H+ + G +S L ++ YAK V A K FD + E++V +W +M+S
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 105 GYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVE 164
Y+ G L F ++ + + N+FT+S L CAR ++ GR I S+ K
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 165 NLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMM 224
N + AL+D+YAKC I DA +FE I + V W + G G +++ +F M
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 225 RQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIR 284
+G +PD ++ I+ Y + G ++
Sbjct: 254 DEGHRPDHLAFVTV-----------------------------------INTYIRLGKLK 278
Query: 285 SAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNIC 344
A L+ M D+++ +ISG + + A + F +M + L +L+
Sbjct: 279 DARLLFGEMSSPDVVAWNVMISGHGKRGCETV-AIEYFFNMRKSSVKSTRSTLGSVLSAI 337
Query: 345 ANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWT 404
VA+L+LG +HA A K + + VG++L+ MY+K ++ A + F+ + +KN + W
Sbjct: 338 GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWN 397
Query: 405 SLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINK 464
++I GYA +G H+ +EL+ MK G +D TF SLL C+ + E F +I K
Sbjct: 398 AMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASH-DLEMGSQFHSIIIK 456
Query: 465 YRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
++ + +VD++A+ G LE A + +M + + W+ I+G+
Sbjct: 457 KKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVT-WNTIIGS 503
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 158/323 (48%), Gaps = 21/323 (6%)
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN 313
+H + LG++S +L +++D+YAK + A + + L+ D+ + +++S ++
Sbjct: 82 VHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLSMYSSIGK 140
Query: 314 HSK---EAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA 370
K LF++ I + ++L+ CA ++ GRQIH K ++
Sbjct: 141 PGKVLRSFVSLFENQIFP----NKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSY 196
Query: 371 VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG 430
G AL+DMYAK I+DA R F+ + D N + WT L +GY K G EA+ ++++M+ EG
Sbjct: 197 CGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEG 256
Query: 431 MVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRG----Q 486
P+ + F++++ G + LF +M + P ++ ++ +RG
Sbjct: 257 HRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGKRGCETVA 311
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYV--VLS 544
+E +NM R+ ++K T S ++L A I N LG + + ++ YV L
Sbjct: 312 IEYFFNM-RKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNI-YVGSSLV 369
Query: 545 NIYTAAGAWDNARKTRKLMEERS 567
++Y+ + A K + +EE++
Sbjct: 370 SMYSKCEKMEAAAKVFEALEEKN 392
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 113/211 (53%), Gaps = 11/211 (5%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ G ++ALKF + L D +T++++L+ C + R+ IH+ I ++ +
Sbjct: 709 QNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDEL 768
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPER-NVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
S +I YAK GD+ + + FD M R NVVSW ++I+GYA+NGY E+AL +F +M +S
Sbjct: 769 TSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQS 828
Query: 126 GVRANQFTYSSALRACARMRWLQGGR----MIQGSIQKGRFVENLFVKSALLDLYAKCGW 181
+ ++ T+ L AC+ + GR M+ G V+++ + ++DL + G+
Sbjct: 829 HIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHV---ACMVDLLGRWGY 885
Query: 182 IEDAWILFERIERK-DVVSWNAMIGGLAMQG 211
+++A E K D W++++G + G
Sbjct: 886 LQEADDFIEAQNLKPDARLWSSLLGACRIHG 916
>sp|Q9FXA9|PPR83_ARATH Putative pentatricopeptide repeat-containing protein At1g56570
OS=Arabidopsis thaliana GN=PCMP-E64 PE=3 SV=1
Length = 611
Score = 343 bits (879), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 186/516 (36%), Positives = 295/516 (57%), Gaps = 9/516 (1%)
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
L+T +I+ Y + G V AR FD MP+R+VV+WTAMI+GYA + Y+ A F M++ G
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG-WIEDA 185
N+FT SS L++C M+ L G ++ G + K +L+V +A++++YA C +E A
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAA 166
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG--MKPDCFTLGSILRASV 243
++F I+ K+ V+W +I G G +++ M+ + + P C T+ AS+
Sbjct: 167 CLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASI 226
Query: 244 GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTA 303
+ K QIH +IK G +S+ + S++D+Y + G + A + M D+I+
Sbjct: 227 DSVTTGK--QIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNT 284
Query: 304 LISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKY 363
LIS R D S EA +F+ + + ++ CAN+A+LN G+Q+H F+
Sbjct: 285 LISELERSD--SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRR 342
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK-NVISWTSLIAGYAKHGYGHEAIEL 422
+ + + NALIDMYAK G I D+ R F E+ D+ N++SWTS++ GY HGYG EA+EL
Sbjct: 343 GFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVEL 402
Query: 423 YKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFA 482
+ KM G+ P+ + F+++L AC H GL +G + F M ++Y I P + ++CVVDL
Sbjct: 403 FDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLG 462
Query: 483 RRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSL-GELAARNLFDMEPEKSVNYV 541
R G++ AY ++ +M KP S W AILGAC + + L LAAR + +++P+ YV
Sbjct: 463 RAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYV 522
Query: 542 VLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
+LS IY A G W + + RK+M +K G S++
Sbjct: 523 MLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWI 558
Score = 152 bits (384), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 195/388 (50%), Gaps = 6/388 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR-KAFDR 90
T S+L+ C + K L+H ++ G E +L++ ++ YA + A F
Sbjct: 113 TLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRD 172
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+ +N V+WT +I+G+ G L ++ ML + + A+RA A + + G
Sbjct: 173 IKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTG 232
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ I S+ K F NL V +++LDLY +CG++ +A F +E KD+++WN +I L +
Sbjct: 233 KQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELE-R 291
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLT 270
+ ++ +F+ QG P+C+T S++ A L Q+H I + G + +L
Sbjct: 292 SDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELA 351
Query: 271 GSLIDVYAKYGSIRSAYQLYRSML-KTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+LID+YAK G+I + +++ ++ + +++S T+++ G+ + EA +LF M+
Sbjct: 352 NALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYG-SHGYGAEAVELFDKMVSSG 410
Query: 330 MGIDDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ D ++ +L+ C + + G + + +Y + D + N ++D+ ++G+I +A
Sbjct: 411 IRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEA 470
Query: 389 NRAFDEMGDK-NVISWTSLIAGYAKHGY 415
+ M K + +W +++ H +
Sbjct: 471 YELVERMPFKPDESTWGAILGACKAHKH 498
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 342 bits (878), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 182/547 (33%), Positives = 308/547 (56%), Gaps = 9/547 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF--- 88
T S++ C +A +HA + +G+ + ++ +I Y+K GD+ + + F
Sbjct: 353 TVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDL 412
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D + +N+V+ MI+ ++Q+ A+ +F+ ML+ G+R ++F+ S L + L
Sbjct: 413 DDIQRQNIVN--VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLN 467
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ + G K V +L V S+L LY+KCG +E+++ LF+ I KD W +MI G
Sbjct: 468 LGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFN 527
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
G+ ++ LF M+ G PD TL ++L L + +IH ++ G++
Sbjct: 528 EYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMD 587
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
L +L+++Y+K GS++ A Q+Y + + D +SC++LISG+++ ++ F LF+DM++
Sbjct: 588 LGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQH-GLIQDGFLLFRDMVMS 646
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+D + +L A +LG Q+HA+ K + +VG++L+ MY+K G I D
Sbjct: 647 GFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDC 706
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
+AF ++ ++I+WT+LIA YA+HG +EA+++Y MK +G P+ VTF+ +L ACSH
Sbjct: 707 CKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHG 766
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
GL E + M+ Y I P H+ C+VD R G+L A + I M+IKP A +W
Sbjct: 767 GLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGT 826
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L AC I+G LG++AA+ ++EP + Y+ LSNI G WD +TRKLM+ +
Sbjct: 827 LLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGV 886
Query: 569 RKNPGYS 575
+K PG+S
Sbjct: 887 QKEPGWS 893
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 252/492 (51%), Gaps = 12/492 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY S+L C + R ++ A +I G E ++ + T ++ YAK G + A + F
Sbjct: 250 DSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVF 308
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
R+P +VVSWT M+SGY ++ +AL +F M SGV N T +S + AC R +
Sbjct: 309 SRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVC 368
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE---RIERKDVVSWNAMIG 205
+ + K F + V +AL+ +Y+K G I+ + +FE I+R+++V N MI
Sbjct: 369 EASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMIT 426
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
+ + LF M+++G++ D F++ S+L + + L K Q+H +K GL
Sbjct: 427 SFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV-LDCLNLGK--QVHGYTLKSGLVL 483
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ SL +Y+K GS+ +Y+L++ + D ++ISGF + + +EA LF +M
Sbjct: 484 DLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGF-NEYGYLREAIGLFSEM 542
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ D+ L +L +C++ SL G++IH + + +G+AL++MY+K G +
Sbjct: 543 LDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSL 602
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A + +D + + + +S +SLI+GY++HG + L++ M G + S+L A
Sbjct: 603 KLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAA 662
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
+ + + G ++ I K + S ++ ++++ G ++ Q+N P
Sbjct: 663 ALSDESSLGAQVHA-YITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQIN-GPDLIA 720
Query: 506 WSAILGACSIYG 517
W+A++ + + +G
Sbjct: 721 WTALIASYAQHG 732
Score = 185 bits (470), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 137/527 (25%), Positives = 254/527 (48%), Gaps = 43/527 (8%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
+Y S++ C +A + L+ H I GY + + +I ++K A K F
Sbjct: 152 SYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDS 211
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
NV W +I+G +N +F M + + +TYSS L ACA + L+ G+
Sbjct: 212 LSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGK 271
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
++Q + K E++FV +A++DLYAKCG + +A +F RI VVSW M+ G
Sbjct: 272 VVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSN 330
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
+ +F+ M G++ + T+ S++ A + + SQ+H + K G + +
Sbjct: 331 DAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAA 390
Query: 272 SLIDVYAKYGSIRSAYQLYRSM---LKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+LI +Y+K G I + Q++ + + +I++ +I+ F++ K A LF M+ +
Sbjct: 391 ALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN--VMITSFSQSKKPGK-AIRLFTRMLQE 447
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ D+ +C +L++ + LNLG+Q+H + K D VG++L +Y+K G + ++
Sbjct: 448 GLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEES 504
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC-SH 447
+ F + K+ W S+I+G+ ++GY EAI L+ +M +G P++ T ++L C SH
Sbjct: 505 YKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSH 564
Query: 448 TGLT--------------CEGWELFTDMINKYRI-------------LPRAEHFSC--VV 478
L +G +L + ++N Y LP + SC ++
Sbjct: 565 PSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLI 624
Query: 479 DLFARRGQLESAYNMIRQM---NIKPTASLWSAILGACSIYGNTSLG 522
+++ G ++ + + R M + S+IL A ++ +SLG
Sbjct: 625 SGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLG 671
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 248/477 (51%), Gaps = 24/477 (5%)
Query: 48 QAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYA 107
QAHL+ +++ ++ L+ ++ +Y+ G + A K FD +P+ +VVS MISGY
Sbjct: 71 QAHLLRRYLLP----FDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYK 126
Query: 108 QNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMI-QGSIQKGRFVENL 166
Q+ E +L FS M G AN+ +Y S + AC+ ++ ++ +I+ G F +
Sbjct: 127 QHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEV 186
Query: 167 FVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ 226
V+SAL+D+++K EDA+ +F +V WN +I G F LF M
Sbjct: 187 -VESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVG 245
Query: 227 GMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRS 285
KPD +T S+L A+ +E ++ + + +IK G E T +++D+YAK G +
Sbjct: 246 FQKPDSYTYSSVL-AACASLEKLRFGKVVQARVIKCGAEDVFVCT-AIVDLYAKCGHMAE 303
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
A +++ + ++S T ++SG+ + N + A ++FK+M + I++ + +++ C
Sbjct: 304 AMEVFSRIPNPSVVSWTVMLSGYTK-SNDAFSALEIFKEMRHSGVEINNCTVTSVISACG 362
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGD---KNVIS 402
+ + Q+HA+ FK D++V ALI MY+KSG+I + + F+++ D +N+++
Sbjct: 363 RPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN 422
Query: 403 WTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL--FACSHTGLTCEGWELFTD 460
+I +++ +AI L+ +M EG+ ++ + SLL C + G G+ L +
Sbjct: 423 --VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSG 480
Query: 461 MINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYG 517
++ + S + L+++ G LE +Y + + + K A W++++ + YG
Sbjct: 481 LVLDLTV------GSSLFTLYSKCGSLEESYKLFQGIPFKDNA-CWASMISGFNEYG 530
Score = 132 bits (331), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 147/293 (50%), Gaps = 4/293 (1%)
Query: 11 GQLKQALK-FSLSCPD-TLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLS 68
G L++A+ FS D T D ST ++L C + + IH + + G + + L
Sbjct: 530 GYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLG 589
Query: 69 TKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR 128
+ ++ Y+K G + AR+ +DR+PE + VS +++ISGY+Q+G ++ L+F M+ SG
Sbjct: 590 SALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFT 649
Query: 129 ANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWIL 188
+ F SS L+A A G + I K V S+LL +Y+K G I+D
Sbjct: 650 MDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKA 709
Query: 189 FERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIE 247
F +I D+++W A+I A G +++ ++ M +G KPD T +L A S GG+
Sbjct: 710 FSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLV 769
Query: 248 LMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDII 299
++ ++ G+E N+ ++D + G +R A +M +K D +
Sbjct: 770 EESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDAL 822
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 342 bits (877), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 189/537 (35%), Positives = 306/537 (56%), Gaps = 21/537 (3%)
Query: 58 TNGYESNLHLSTKVIIFYAKVGDVL-SARKAFDRMPERNVVSWTAMISGYAQNGYDENAL 116
T +ES++ + +I + K + +A K FD+M E NVV+WT MI+ Q G+ A+
Sbjct: 195 TGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAI 254
Query: 117 LVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLY 176
F M+ SG +++FT SS ACA + L G+ + + V++ V+ +L+D+Y
Sbjct: 255 RFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMY 312
Query: 177 AKC---GWIEDAWILFERIERKDVVSWNAMIGG------LAMQGFNDDSFWLFRSMMRQG 227
AKC G ++D +F+R+E V+SW A+I G LA + N LF M+ QG
Sbjct: 313 AKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAIN-----LFSEMITQG 367
Query: 228 -MKPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRS 285
++P+ FT S +A G + ++ Q+ K GL S++ + S+I ++ K +
Sbjct: 368 HVEPNHFTFSSAFKA-CGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMED 426
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
A + + S+ + +++S + G R+ N ++AF L ++ +++G+ +L+ A
Sbjct: 427 AQRAFESLSEKNLVSYNTFLDGTCRNLNF-EQAFKLLSEITERELGVSAFTFASLLSGVA 485
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
NV S+ G QIH+ K S + V NALI MY+K G I A+R F+ M ++NVISWTS
Sbjct: 486 NVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTS 545
Query: 406 LIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKY 465
+I G+AKHG+ +E + +M EG+ PN+VT++++L ACSH GL EGW F M +
Sbjct: 546 MITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDH 605
Query: 466 RILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
+I P+ EH++C+VDL R G L A+ I M + +W LGAC ++ NT LG+LA
Sbjct: 606 KIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLA 665
Query: 526 ARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
AR + +++P + Y+ LSNIY AG W+ + + R+ M+ER+L K G S+++ K
Sbjct: 666 ARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDK 722
Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 153/574 (26%), Positives = 284/574 (49%), Gaps = 48/574 (8%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
+D T+ SLL+ CI + R L+HA +I E + L +I Y+K GD A
Sbjct: 60 MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDV 119
Query: 88 FD---RMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
F+ R +R+VVSW+AM++ Y NG + +A+ VF L G+ N + Y++ +RAC+
Sbjct: 120 FETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNS 179
Query: 145 RWLQGGRMIQGSIQK-GRFVENLFVKSALLDLYAKC-GWIEDAWILFERIERKDVVSWNA 202
++ GR+ G + K G F ++ V +L+D++ K E+A+ +F+++ +VV+W
Sbjct: 180 DFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTL 239
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
MI GF ++ F M+ G + D FTL S+ A L Q+H I+ G
Sbjct: 240 MITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSG 299
Query: 263 LESSNKLTGSLIDVYAKY---GSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
L + + SL+D+YAK GS+ +++ M ++S TALI+G+ ++ N + EA
Sbjct: 300 L--VDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAI 357
Query: 320 DLFKDMILK-KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDM 378
+LF +MI + + + C N++ +G+Q+ AFK + +++V N++I M
Sbjct: 358 NLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISM 417
Query: 379 YAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTF 438
+ KS + DA RAF+ + +KN++S+ + + G ++ +A +L ++ + + TF
Sbjct: 418 FVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTF 477
Query: 439 LSLLFACSHTGLTCEGWELFTDMI-------------------------NKYRILPRAEH 473
SLL ++ G +G ++ + ++ R+ E+
Sbjct: 478 ASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMEN 537
Query: 474 -----FSCVVDLFARRG---QLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELA 525
++ ++ FA+ G ++ +N + + +KP + AIL ACS G S G
Sbjct: 538 RNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRH 597
Query: 526 ARNLFD---MEPEKSVNYVVLSNIYTAAGAWDNA 556
++++ ++P K +Y + ++ AG +A
Sbjct: 598 FNSMYEDHKIKP-KMEHYACMVDLLCRAGLLTDA 630
Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 221/465 (47%), Gaps = 56/465 (12%)
Query: 65 LHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLR 124
++++ ++I+ + GD+ A A D M A++G + FS++L+
Sbjct: 26 INVADRLILRHLNAGDLRGAVSALDLM---------------ARDGIRPMDSVTFSSLLK 70
Query: 125 SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG---W 181
S +RA F R+ L R+I+ I+ + N +L+ LY+K G
Sbjct: 71 SCIRARDF----------RLGKLVHARLIEFDIEPDSVLYN-----SLISLYSKSGDSAK 115
Query: 182 IEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
ED + R ++DVVSW+AM+ G D+ +F + G+ P+ + +++RA
Sbjct: 116 AEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRA 175
Query: 242 SVGGIELMKISQIH-DLIIKLGLESSNKLTG-SLIDVYAK-YGSIRSAYQLYRSMLKTDI 298
+ + + ++ ++K G S+ G SLID++ K S +AY+++ M + ++
Sbjct: 176 CSNS-DFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNV 234
Query: 299 ISCTALIS-----GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG 353
++ T +I+ GF R EA F DM+L D L + + CA + +L+LG
Sbjct: 235 VTWTLMITRCMQMGFPR------EAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288
Query: 354 RQIHAFAFKYQSSYDAAVGNALIDMYAK---SGEIADANRAFDEMGDKNVISWTSLIAGY 410
+Q+H++A + S V +L+DMYAK G + D + FD M D +V+SWT+LI GY
Sbjct: 289 KQLHSWAIR--SGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGY 346
Query: 411 AKH-GYGHEAIELYKKMKHEGMV-PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
K+ EAI L+ +M +G V PN TF S AC + G ++ K +
Sbjct: 347 MKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAF-KRGLA 405
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGAC 513
+ + V+ +F + ++E A ++ K S + + G C
Sbjct: 406 SNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTC 450
Score = 92.4 bits (228), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 92/177 (51%), Gaps = 2/177 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ SLL + + R+ IH+ ++ G N + +I Y+K G + +A + F+ M
Sbjct: 476 TFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFM 535
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL-QGG 150
RNV+SWT+MI+G+A++G+ L F+ M+ GV+ N+ TY + L AC+ + + +G
Sbjct: 536 ENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGW 595
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIGG 206
R + + + + ++DL + G + DA+ + + DV+ W +G
Sbjct: 596 RHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGA 652
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 340 bits (873), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 191/571 (33%), Positives = 299/571 (52%), Gaps = 38/571 (6%)
Query: 15 QALKFSLSCPDTLLD---PSTYMSLLQFCIDKKAE-RQAHLIHAHIITNGYESNLHLSTK 70
Q+ K S S P LD P + LL +D + R +H+ II N L K
Sbjct: 20 QSRKVSSSLPKLELDQKSPQETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVK 79
Query: 71 VIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRAN 130
++ YA + DV SARK FD +PERNV+ MI Y NG+ + VF M VR +
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 131 QFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFE 190
+T+ L+AC+ + GR I GS K LFV + L+ +Y KCG++ +A ++ +
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 191 RIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMK 250
+ R+DVVSWN+++ G A DD+ + R M + D T+ S+L A V
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA-VSNTTTEN 258
Query: 251 ISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR 310
+ + D+ K+G K ++S +I G
Sbjct: 259 VMYVKDMFFKMG--------------------------------KKSLVSWNVMI-GVYM 285
Query: 311 DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAA 370
+ EA +L+ M D V + +L C + ++L+LG++IH + + + +
Sbjct: 286 KNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL 345
Query: 371 VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG 430
+ NALIDMYAK G + A F+ M ++V+SWT++I+ Y G G +A+ L+ K++ G
Sbjct: 346 LENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSG 405
Query: 431 MVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESA 490
+VP+ + F++ L ACSH GL EG F M + Y+I PR EH +C+VDL R G+++ A
Sbjct: 406 LVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEA 465
Query: 491 YNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAA 550
Y I+ M+++P +W A+LGAC ++ +T +G LAA LF + PE+S YV+LSNIY A
Sbjct: 466 YRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKA 525
Query: 551 GAWDNARKTRKLMEERSLRKNPGYSFLQSSK 581
G W+ R +M+ + L+KNPG S ++ ++
Sbjct: 526 GRWEEVTNIRNIMKSKGLKKNPGASNVEVNR 556
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 339 bits (870), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 192/558 (34%), Positives = 305/558 (54%), Gaps = 9/558 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD TY L FC ++ L+H ++ NG + L +I Y+K G + A
Sbjct: 146 LDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSL 205
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACA---RM 144
FDR ER+ VSW ++ISGY + G E L + + M R G+ + S L+AC
Sbjct: 206 FDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNE 265
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
+++ G I K ++ V++ALLD+YAK G +++A LF + K+VV++NAMI
Sbjct: 266 GFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMI 325
Query: 205 GG-LAMQGFNDDS----FWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLII 259
G L M D++ F LF M R+G++P T +L+A L QIH LI
Sbjct: 326 SGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALIC 385
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
K +S + +LI++YA GS Q + S K DI S T++I +++ + AF
Sbjct: 386 KNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNE-QLESAF 444
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMY 379
DLF+ + + ++ + LM++ CA+ A+L+ G QI +A K +V + I MY
Sbjct: 445 DLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMY 504
Query: 380 AKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFL 439
AKSG + AN+ F E+ + +V +++++I+ A+HG +EA+ +++ MK G+ PN FL
Sbjct: 505 AKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFL 564
Query: 440 SLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNI 499
+L AC H GL +G + F M N YRI P +HF+C+VDL R G+L A N+I
Sbjct: 565 GVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGF 624
Query: 500 KPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKT 559
+ W A+L +C +Y ++ +G+ A L ++EPE S +YV+L NIY +G +A +
Sbjct: 625 QDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEV 684
Query: 560 RKLMEERSLRKNPGYSFL 577
R+LM +R ++K P S++
Sbjct: 685 RELMRDRGVKKEPALSWI 702
Score = 235 bits (599), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 155/526 (29%), Positives = 267/526 (50%), Gaps = 26/526 (4%)
Query: 20 SLSCP-DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKV 78
SL P +T LD Y L Q + L H H+I + L+L ++ Y K
Sbjct: 36 SLCQPKNTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKC 95
Query: 79 GDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSAL 138
++ AR+ FDRMPERN++S+ ++ISGY Q G+ E A+ +F + ++ ++FTY+ AL
Sbjct: 96 RELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGAL 155
Query: 139 RACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVV 198
C L G ++ G + + +F+ + L+D+Y+KCG ++ A LF+R + +D V
Sbjct: 156 GFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQV 215
Query: 199 SWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASV-----GGIELMKISQ 253
SWN++I G G ++ L M R G+ + LGS+L+A G IE K
Sbjct: 216 SWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIE--KGMA 273
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFAR--- 310
IH KLG+E + +L+D+YAK GS++ A +L+ M ++++ A+ISGF +
Sbjct: 274 IHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDE 333
Query: 311 -DDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDA 369
D S EAF LF DM + + ++L C+ +L GRQIHA K D
Sbjct: 334 ITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDE 393
Query: 370 AVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE 429
+G+ALI++YA G D + F +++ SWTS+I + ++ A +L++++
Sbjct: 394 FIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSS 453
Query: 430 GMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCV----VDLFARRG 485
+ P + T ++ AC+ G + I Y I + F+ V + ++A+ G
Sbjct: 454 HIRPEEYTVSLMMSACADFAALSSG-----EQIQGYAIKSGIDAFTSVKTSSISMYAKSG 508
Query: 486 QLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
+ A + ++ P + +SA++ + + +G+ + A N+F+
Sbjct: 509 NMPLANQVFIEVQ-NPDVATYSAMISSLAQHGSAN----EALNIFE 549
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 338 bits (866), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 200/561 (35%), Positives = 303/561 (54%), Gaps = 16/561 (2%)
Query: 26 TLLDPSTYMSLLQFCIDKKAERQAHLIHAHII-TNGYESNLHLSTKVIIFYAKVGDVLSA 84
+LL LL+ I + R ++HA I+ T L+ +I Y+K+ SA
Sbjct: 2 SLLSADALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESA 61
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
R P RNVVSWT++ISG AQNG+ AL+ F M R GV N FT+ A +A A +
Sbjct: 62 RLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASL 121
Query: 145 RWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
R G+ I +++ GR ++ +FV + D+Y K +DA LF+ I +++ +WNA
Sbjct: 122 RLPVTGKQIHALAVKCGRILD-VFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAF 180
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGL 263
I G ++ F R P+ T + L A + L Q+H L+++ G
Sbjct: 181 ISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGF 240
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF- 322
++ + LID Y K IRS+ ++ M + +S +L++ + + NH E +
Sbjct: 241 DTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQ--NHEDEKASVLY 298
Query: 323 ----KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDM 378
KD++ D ++ +L+ CA +A L LGR IHA A K VG+AL+DM
Sbjct: 299 LRSRKDIV----ETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDM 354
Query: 379 YAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGM--VPNDV 436
Y K G I D+ +AFDEM +KN+++ SLI GYA G A+ L+++M G PN +
Sbjct: 355 YGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYM 414
Query: 437 TFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQ 496
TF+SLL ACS G G ++F M + Y I P AEH+SC+VD+ R G +E AY I++
Sbjct: 415 TFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKK 474
Query: 497 MNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNA 556
M I+PT S+W A+ AC ++G LG LAA NLF ++P+ S N+V+LSN + AAG W A
Sbjct: 475 MPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEA 534
Query: 557 RKTRKLMEERSLRKNPGYSFL 577
R+ ++ ++K GYS++
Sbjct: 535 NTVREELKGVGIKKGAGYSWI 555
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 338 bits (866), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 187/551 (33%), Positives = 301/551 (54%), Gaps = 5/551 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
+ STY + + +R +IH + +G +S L L + ++ Y K V ARK F
Sbjct: 118 NSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVF 177
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAML-RSGVRANQFTYSSALRACARMRWL 147
DRMPE++ + W MISGY +N ++ VF ++ S R + T L A A ++ L
Sbjct: 178 DRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQEL 237
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G I K + +V + + LY+KCG I+ LF + D+V++NAMI G
Sbjct: 238 RLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGY 297
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
G + S LF+ +M G + TL S++ V G LM I IH +K S
Sbjct: 298 TSNGETELSLSLFKELMLSGARLRSSTLVSLV--PVSG-HLMLIYAIHGYCLKSNFLSHA 354
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
++ +L VY+K I SA +L+ + + S A+ISG+ ++ +++A LF++M
Sbjct: 355 SVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQN-GLTEDAISLFREMQK 413
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ + V + +L+ CA + +L+LG+ +H V ALI MYAK G IA+
Sbjct: 414 SEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAE 473
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A R FD M KN ++W ++I+GY HG G EA+ ++ +M + G+ P VTFL +L+ACSH
Sbjct: 474 ARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSH 533
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
GL EG E+F MI++Y P +H++C+VD+ R G L+ A I M+I+P +S+W
Sbjct: 534 AGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWE 593
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
+LGAC I+ +T+L + LF+++P+ +V+LSNI++A + A R+ ++R
Sbjct: 594 TLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRK 653
Query: 568 LRKNPGYSFLQ 578
L K PGY+ ++
Sbjct: 654 LAKAPGYTLIE 664
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 136/511 (26%), Positives = 247/511 (48%), Gaps = 20/511 (3%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHL--IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
L+ +TY+ K++ +HL HA II +G+ +++ L TK+ + +G + A
Sbjct: 17 LISKNTYLDFF-----KRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYA 71
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS-GVRANQFTYSSALRACAR 143
R F + +V + ++ G++ N ++L VF+ + +S ++ N TY+ A+ A +
Sbjct: 72 RDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASG 131
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
R + GR+I G L + S ++ +Y K +EDA +F+R+ KD + WN M
Sbjct: 132 FRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTM 191
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQG-MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
I G +S +FR ++ + + D TL IL A EL QIH L K G
Sbjct: 192 ISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTG 251
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
S + + I +Y+K G I+ L+R K DI++ A+I G+ + ++ + LF
Sbjct: 252 CYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYT-SNGETELSLSLF 310
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
K+++L + L ++ + + L L IH + K A+V AL +Y+K
Sbjct: 311 KELMLSGARLRSSTLVSLVPVSGH---LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKL 367
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
EI A + FDE +K++ SW ++I+GY ++G +AI L+++M+ PN VT +L
Sbjct: 368 NEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCIL 427
Query: 443 FACSHTG-LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
AC+ G L+ W D++ + ++ ++A+ G + A + M K
Sbjct: 428 SACAQLGALSLGKW--VHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKN 485
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLFDM 532
+ W+ ++ ++G G+ A ++M
Sbjct: 486 EVT-WNTMISGYGLHGQ---GQEALNIFYEM 512
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 185/400 (46%), Gaps = 20/400 (5%)
Query: 22 SCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDV 81
SC T LD +T + +L + + R IH+ G S+ ++ T I Y+K G +
Sbjct: 215 SC--TRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKI 272
Query: 82 LSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC 141
F + ++V++ AMI GY NG E +L +F ++ SG R T S +
Sbjct: 273 KMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVS 332
Query: 142 ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN 201
+ + I G K F+ + V +AL +Y+K IE A LF+ K + SWN
Sbjct: 333 GHLMLIYA---IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWN 389
Query: 202 AMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMKISQIHDLII 259
AMI G G +D+ LFR M + P+ T+ IL A +G + L K +HDL+
Sbjct: 390 AMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGK--WVHDLVR 447
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
ESS ++ +LI +YAK GSI A +L+ M K + ++ +ISG+ +EA
Sbjct: 448 STDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGL-HGQGQEAL 506
Query: 320 DLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQ-----IHAFAFKYQSSYDAAVGNA 374
++F +M+ + V +L C++ + G + IH + F+ + A
Sbjct: 507 NIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYA----C 562
Query: 375 LIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKH 413
++D+ ++G + A + + M + W +L+ H
Sbjct: 563 MVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIH 602
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 338 bits (866), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 183/553 (33%), Positives = 315/553 (56%), Gaps = 7/553 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D + L+ C + + IH ++ N+ L T ++ YAK G++ SA K F
Sbjct: 141 DDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVL-TGLLDMYAKCGEIKSAHKVF 199
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ + RNVV WT+MI+GY +N E L++F+ M + V N++TY + + AC ++ L
Sbjct: 200 NDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALH 259
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G+ G + K + + ++LLD+Y KCG I +A +F D+V W AMI G
Sbjct: 260 QGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYT 319
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSN 267
G +++ LF+ M +KP+C T+ S+L + G IE +++ + +H L IK+G+ +N
Sbjct: 320 HNGSVNEALSLFQKMKGVEIKPNCVTIASVL-SGCGLIENLELGRSVHGLSIKVGIWDTN 378
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ +L+ +YAK R A ++ + DI++ ++ISGF+++ + EA LF M
Sbjct: 379 -VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGS-IHEALFLFHRMNS 436
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK--YQSSYDAAVGNALIDMYAKSGEI 385
+ + + V + + + CA++ SL +G +HA++ K + +S VG AL+D YAK G+
Sbjct: 437 ESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDP 496
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
A FD + +KN I+W+++I GY K G ++EL+++M + PN+ TF S+L AC
Sbjct: 497 QSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSAC 556
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
HTG+ EG + F+ M Y P +H++C+VD+ AR G+LE A ++I +M I+P
Sbjct: 557 GHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRC 616
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
+ A L C ++ LGE+ + + D+ P+ + YV++SN+Y + G W+ A++ R LM++
Sbjct: 617 FGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQ 676
Query: 566 RSLRKNPGYSFLQ 578
R L K G+S ++
Sbjct: 677 RGLSKIAGHSTME 689
Score = 232 bits (592), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 155/556 (27%), Positives = 282/556 (50%), Gaps = 18/556 (3%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
LL C + + RQ+H + + NG ++ ++TK++ Y G AR FD++PE +
Sbjct: 50 LLSKCTNIDSLRQSHGV---LTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG 155
W M+ Y N + ++ +++ G R + +S AL+AC ++ L G+ I
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD 215
+ K +N+ V + LLD+YAKCG I+ A +F I ++VV W +MI G ++
Sbjct: 167 QLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEE 225
Query: 216 SFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLID 275
LF M + + +T G+++ A L + H ++K G+E S+ L SL+D
Sbjct: 226 GLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLD 285
Query: 276 VYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDV 335
+Y K G I +A +++ D++ TA+I G+ + + EA LF+ M ++ + V
Sbjct: 286 MYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGS-VNEALSLFQKMKGVEIKPNCV 344
Query: 336 ILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEM 395
+ +L+ C + +L LGR +H + K +D V NAL+ MYAK + DA F+
Sbjct: 345 TIASVLSGCGLIENLELGRSVHGLSIKV-GIWDTNVANALVHMYAKCYQNRDAKYVFEME 403
Query: 396 GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGW 455
+K++++W S+I+G++++G HEA+ L+ +M E + PN VT SL AC+ G G
Sbjct: 404 SEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGS 463
Query: 456 ELFTDMINKYRILPRAEHF-SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACS 514
L + + + H + ++D +A+ G +SA + + K T + WSA++G
Sbjct: 464 SLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTIT-WSAMIGGYG 522
Query: 515 IYGNTSLGELAARNLFD--MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNP 572
G+T + + LF+ ++ ++ N ++I +A G + +K S+ K+
Sbjct: 523 KQGDT----IGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFS--SMYKD- 575
Query: 573 GYSFLQSSKKNILLLE 588
Y+F S+K +++
Sbjct: 576 -YNFTPSTKHYTCMVD 590
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 337 bits (863), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 189/572 (33%), Positives = 310/572 (54%), Gaps = 3/572 (0%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPSTY--MSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K L +AL+F + ++P Y LL+ C D+ R IH ++ +G+ +L
Sbjct: 112 KVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLF 171
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
T + YAK V ARK FDRMPER++VSW +++GY+QNG AL + +M
Sbjct: 172 AMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEEN 231
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAW 186
++ + T S L A + +R + G+ I G + F + + +AL+D+YAKCG +E A
Sbjct: 232 LKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETAR 291
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
LF+ + ++VVSWN+MI ++ +F+ M+ +G+KP ++ L A
Sbjct: 292 QLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLG 351
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
+L + IH L ++LGL+ + + SLI +Y K + +A ++ + ++S A+I
Sbjct: 352 DLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMIL 411
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
GFA++ +A + F M + + D ++ A ++ + + IH +
Sbjct: 412 GFAQN-GRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLD 470
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
+ V AL+DMYAK G I A FD M +++V +W ++I GY HG+G A+EL+++M
Sbjct: 471 KNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEM 530
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
+ + PN VTFLS++ ACSH+GL G + F M Y I +H+ +VDL R G+
Sbjct: 531 QKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGR 590
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
L A++ I QM +KP +++ A+LGAC I+ N + E AA LF++ P+ +V+L+NI
Sbjct: 591 LNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANI 650
Query: 547 YTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
Y AA W+ + R M + LRK PG S ++
Sbjct: 651 YRAASMWEKVGQVRVSMLRQGLRKTPGCSMVE 682
Score = 202 bits (513), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 135/501 (26%), Positives = 258/501 (51%), Gaps = 20/501 (3%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN 95
LL+ C K RQ I + NG TK++ + + G V A + F+ + +
Sbjct: 43 LLERCSSLKELRQ---ILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 99
Query: 96 VVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG 155
V + M+ G+A+ + AL F M V + ++ L+ C L+ G+ I G
Sbjct: 100 NVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159
Query: 156 SIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDD 215
+ K F +LF + L ++YAKC + +A +F+R+ +D+VSWN ++ G + G
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARM 219
Query: 216 SFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI-SQIHDLIIKLGLESSNKLTGSLI 274
+ + +SM + +KP T+ S+L A V + L+ + +IH ++ G +S ++ +L+
Sbjct: 220 ALEMVKSMCEENLKPSFITIVSVLPA-VSALRLISVGKEIHGYAMRSGFDSLVNISTALV 278
Query: 275 DVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDD 334
D+YAK GS+ +A QL+ ML+ +++S ++I + +++N KEA +F+ M+ + + D
Sbjct: 279 DMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNEN-PKEAMLIFQKMLDEGVKPTD 337
Query: 335 VILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDE 394
V + L+ CA++ L GR IH + + + +V N+LI MY K E+ A F +
Sbjct: 338 VSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGK 397
Query: 395 MGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEG 454
+ + ++SW ++I G+A++G +A+ + +M+ + P+ T++S++ A + +T
Sbjct: 398 LQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA 457
Query: 455 -W---ELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
W + ++K + A +VD++A+ G + A +I M + + W+A++
Sbjct: 458 KWIHGVVMRSCLDKNVFVTTA-----LVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMI 511
Query: 511 GACSIYGNTSLGELAARNLFD 531
YG G+ AA LF+
Sbjct: 512 DG---YGTHGFGK-AALELFE 528
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 336 bits (862), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 186/623 (29%), Positives = 328/623 (52%), Gaps = 71/623 (11%)
Query: 26 TLLDPSTYMSLLQFCIDKK-AERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
+ D S + LL CI K + +HA +I +G+ + + + ++I Y+K G +
Sbjct: 15 SFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDG 74
Query: 85 RKAFDRMPERNV-------------------------------VSWTAMISGYAQNGYDE 113
R+ FD+MP+RN+ +W +M+SG+AQ+ E
Sbjct: 75 RQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCE 134
Query: 114 NALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALL 173
AL F+ M + G N+++++S L AC+ + + G + I K F+ ++++ SAL+
Sbjct: 135 EALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALV 194
Query: 174 DLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCF 233
D+Y+KCG + DA +F+ + ++VVSWN++I G ++ +F+ M+ ++PD
Sbjct: 195 DMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEV 254
Query: 234 TLGSILRASVGGIELMKISQ-IHDLIIKLG-LESSNKLTGSLIDVYAKYGSIRSAYQLYR 291
TL S++ A + +K+ Q +H ++K L + L+ + +D+YAK I+ A ++
Sbjct: 255 TLASVISA-CASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFD 313
Query: 292 SMLKTDIISCTALISGFA------------------------------RDDNHSKEAFDL 321
SM ++I+ T++ISG+A + ++EA L
Sbjct: 314 SMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSL 373
Query: 322 FKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF----AFKYQSSY--DAAVGNAL 375
F + + + +L CA++A L+LG Q H FK+QS D VGN+L
Sbjct: 374 FCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSL 433
Query: 376 IDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND 435
IDMY K G + + F +M +++ +SW ++I G+A++GYG+EA+EL+++M G P+
Sbjct: 434 IDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDH 493
Query: 436 VTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIR 495
+T + +L AC H G EG F+ M + + P +H++C+VDL R G LE A +MI
Sbjct: 494 ITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIE 553
Query: 496 QMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDN 555
+M ++P + +W ++L AC ++ N +LG+ A L ++EP S YV+LSN+Y G W++
Sbjct: 554 EMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWED 613
Query: 556 ARKTRKLMEERSLRKNPGYSFLQ 578
RK M + + K PG S+++
Sbjct: 614 VMNVRKSMRKEGVTKQPGCSWIK 636
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 336 bits (861), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 183/534 (34%), Positives = 300/534 (56%), Gaps = 5/534 (0%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
IHAHI+ G E + L +I Y K G V++A K F+ MP +N++SWT ++SGY QN
Sbjct: 271 IHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNAL 330
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSA 171
+ A+ +F++M + G++ + + SS L +CA + L G + K + +V ++
Sbjct: 331 HKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNS 390
Query: 172 LLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN---DDSFWLFRSMMRQGM 228
L+D+YAKC + DA +F+ DVV +NAMI G + G ++ +FR M + +
Sbjct: 391 LIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLI 450
Query: 229 KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQ 288
+P T S+LRAS L QIH L+ K GL +LIDVY+ ++ +
Sbjct: 451 RPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRL 510
Query: 289 LYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
++ M D++ ++ +G+ + + ++EA +LF ++ L + D+ M+ N+A
Sbjct: 511 VFDEMKVKDLVIWNSMFAGYVQQ-SENEEALNLFLELQLSRERPDEFTFANMVTAAGNLA 569
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIA 408
S+ LG++ H K + + NAL+DMYAK G DA++AFD ++V+ W S+I+
Sbjct: 570 SVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVIS 629
Query: 409 GYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRIL 468
YA HG G +A+++ +KM EG+ PN +TF+ +L ACSH GL +G + F M+ ++ I
Sbjct: 630 SYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIE 688
Query: 469 PRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARN 528
P EH+ C+V L R G+L A +I +M KP A +W ++L C+ GN L E AA
Sbjct: 689 PETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEM 748
Query: 529 LFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+P+ S ++ +LSNIY + G W A+K R+ M+ + K PG S++ +K+
Sbjct: 749 AILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKE 802
Score = 231 bits (590), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 161/581 (27%), Positives = 284/581 (48%), Gaps = 48/581 (8%)
Query: 30 PSTYM--SLLQFC--IDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSAR 85
P+ Y+ S +Q C +D + + + ++ +G++ ++++ T +I FY K G++ AR
Sbjct: 144 PNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYAR 203
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
FD +PE++ V+WT MISG + G +L +F ++ V + + S+ L AC+ +
Sbjct: 204 LVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILP 263
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
+L+GG+ I I + + + + L+D Y KCG + A LF + K+++SW ++
Sbjct: 264 FLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLS 323
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
G + ++ LF SM + G+KPD + SIL + L +Q+H IK L +
Sbjct: 324 GYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGN 383
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSK--EAFDLFK 323
+ +T SLID+YAK + A +++ D++ A+I G++R + EA ++F+
Sbjct: 384 DSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFR 443
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
DM + + + +L A++ SL L +QIH FKY + D G+ALID+Y+
Sbjct: 444 DMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCY 503
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL- 442
+ D+ FDEM K+++ W S+ AGY + EA+ L+ +++ P++ TF +++
Sbjct: 504 CLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVT 563
Query: 443 -------------FACS--HTGLTCEGW--ELFTDMINKYRILPRAEH------------ 473
F C GL C + DM K P H
Sbjct: 564 AAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGS-PEDAHKAFDSAASRDVV 622
Query: 474 -FSCVVDLFARRGQLESAYNMIRQM---NIKPTASLWSAILGACSIYGNTSLG----ELA 525
++ V+ +A G+ + A M+ +M I+P + +L ACS G G EL
Sbjct: 623 CWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELM 682
Query: 526 ARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
R F +EPE +YV + ++ AG + AR+ + M +
Sbjct: 683 LR--FGIEPETE-HYVCMVSLLGRAGRLNKARELIEKMPTK 720
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 172/557 (30%), Positives = 289/557 (51%), Gaps = 30/557 (5%)
Query: 33 YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP 92
+ LLQ +++H II G E + +LS +I Y++ G ++ ARK F++MP
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 93 ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA-NQFTYSSALRACA----RMRWL 147
ERN+VSW+ M+S +G E +L+VF R+ + N++ SS ++AC+ R RW+
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWM 166
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+Q + K F +++V + L+D Y K G I+ A ++F+ + K V+W MI G
Sbjct: 167 V--FQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGC 224
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
G + S LF +M + PD + L ++L A L QIH I++ GLE
Sbjct: 225 VKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDA 284
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
L LID Y K G + +A++L+ M +IIS T L+SG+ ++ H KEA +LF M
Sbjct: 285 SLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALH-KEAMELFTSM-- 341
Query: 328 KKMGI-DDVILC-LMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
K G+ D+ C +L CA++ +L G Q+HA+ K D+ V N+LIDMYAK +
Sbjct: 342 SKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCL 401
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYG---HEAIELYKKMKHEGMVPNDVTFLSLL 442
DA + FD +V+ + ++I GY++ G HEA+ +++ M+ + P+ +TF+SLL
Sbjct: 402 TDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLL 461
Query: 443 FACSHTGLTCEGW-ELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP 501
A + LT G + ++ KY + S ++D+++ L+ + + +M +K
Sbjct: 462 RASA--SLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKD 519
Query: 502 TASLWSAILGACSIYGNTSLGELAARNLF---DMEPEKSVNYVVLSNIYTAAGAWDNARK 558
+W+++ Y S E A NLF + E+ + +N+ TAAG + +
Sbjct: 520 LV-IWNSMFAG---YVQQSENE-EALNLFLELQLSRERPDEF-TFANMVTAAGNLASVQL 573
Query: 559 TRKL---MEERSLRKNP 572
++ + +R L NP
Sbjct: 574 GQEFHCQLLKRGLECNP 590
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 336 bits (861), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 192/537 (35%), Positives = 302/537 (56%), Gaps = 6/537 (1%)
Query: 51 LIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG 110
++HAH+I + + S++ + T + + K V A K F+RMPER+ +W AM+SG+ Q+G
Sbjct: 73 MVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSG 132
Query: 111 YDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFVK 169
+ + A +F M + + + T + +++ + + L+ + I+ G V+ + V
Sbjct: 133 HTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQ-VTVA 191
Query: 170 SALLDLYAKCGWIEDAWILFERIERKD--VVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
+ + Y KCG ++ A ++FE I+R D VVSWN+M ++ G D+F L+ M+R+
Sbjct: 192 NTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREE 251
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
KPD T ++ + L + IH I LG + + + I +Y+K SA
Sbjct: 252 FKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSAR 311
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
L+ M +S T +ISG+A + EA LF MI D V L +++ C
Sbjct: 312 LLFDIMTSRTCVSWTVMISGYAEKGDMD-EALALFHAMIKSGEKPDLVTLLSLISGCGKF 370
Query: 348 ASLNLGRQIHAFAFKYQSSYD-AAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
SL G+ I A A Y D + NALIDMY+K G I +A FD +K V++WT++
Sbjct: 371 GSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTM 430
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYR 466
IAGYA +G EA++L+ KM PN +TFL++L AC+H+G +GWE F M Y
Sbjct: 431 IAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYN 490
Query: 467 ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAA 526
I P +H+SC+VDL R+G+LE A +IR M+ KP A +W A+L AC I+ N + E AA
Sbjct: 491 ISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAA 550
Query: 527 RNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKN 583
+LF++EP+ + YV ++NIY AAG WD + R +M++R+++K PG S +Q + KN
Sbjct: 551 ESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKN 607
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 205/436 (47%), Gaps = 26/436 (5%)
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQ 154
+V +W I +LL+F M R G N FT+ +ACAR+ + M+
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 155 GSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFND 214
+ K F ++FV +A +D++ KC ++ A +FER+ +D +WNAM+ G G D
Sbjct: 76 AHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTD 135
Query: 215 DSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLI 274
+F LFR M + PD T+ ++++++ L + +H + I+LG++ + + I
Sbjct: 136 KAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWI 195
Query: 275 DVYAKYGSIRSAYQLYRSMLKTD--IISCTALISGFARDDNHSKEAFDLFKDMILKKMGI 332
Y K G + SA ++ ++ + D ++S ++ ++ + +AF L+ M+ ++
Sbjct: 196 STYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSV-FGEAFDAFGLYCLMLREEFKP 254
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAF 392
D + C N +L GR IH+ A + D N I MY+KS + A F
Sbjct: 255 DLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLF 314
Query: 393 DEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG-LT 451
D M + +SWT +I+GYA+ G EA+ L+ M G P+ VT LSL+ C G L
Sbjct: 315 DIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLE 374
Query: 452 CEGWELFTDMINKYRILPRAEHFSC----------VVDLFARRGQLESAYNMIRQMNIKP 501
W I RA+ + C ++D++++ G + A ++ K
Sbjct: 375 TGKW-----------IDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEK- 422
Query: 502 TASLWSAILGACSIYG 517
T W+ ++ ++ G
Sbjct: 423 TVVTWTTMIAGYALNG 438
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 141/273 (51%), Gaps = 14/273 (5%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D ST+++L C + + Q LIH+H I G + ++ I Y+K D SAR F
Sbjct: 255 DLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLF 314
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
D M R VSWT MISGYA+ G + AL +F AM++SG + + T S + C + L+
Sbjct: 315 DIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLE 374
Query: 149 GGRMIQGSIQ-KGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ I G +N+ + +AL+D+Y+KCG I +A +F+ K VV+W MI G
Sbjct: 375 TGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGY 434
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMK-------ISQIHDLIIK 260
A+ G ++ LF M+ KP+ T ++L+A L K + Q+++ I
Sbjct: 435 ALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYN--IS 492
Query: 261 LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
GL+ + ++D+ + G + A +L R+M
Sbjct: 493 PGLDHYS----CMVDLLGRKGKLEEALELIRNM 521
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 174/367 (47%), Gaps = 11/367 (2%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T M+L+Q +K+ + +HA I G + + ++ I Y K GD+ SA+ F
Sbjct: 152 DSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVF 211
Query: 89 DRMP--ERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
+ + +R VVSW +M Y+ G +A ++ MLR + + T+ + +C
Sbjct: 212 EAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPET 271
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
L GR+I +++ + + +Y+K A +LF+ + + VSW MI G
Sbjct: 272 LTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISG 331
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR--ASVGGIELMK-ISQIHDLIIKLGL 263
A +G D++ LF +M++ G KPD TL S++ G +E K I D+ G
Sbjct: 332 YAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADI---YGC 388
Query: 264 ESSN-KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
+ N + +LID+Y+K GSI A ++ + + +++ T +I+G+A + EA LF
Sbjct: 389 KRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIF-LEALKLF 447
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQ-IHAFAFKYQSSYDAAVGNALIDMYAK 381
MI + + +L CA+ SL G + H Y S + ++D+ +
Sbjct: 448 SKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGR 507
Query: 382 SGEIADA 388
G++ +A
Sbjct: 508 KGKLEEA 514
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 334 bits (857), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 195/599 (32%), Positives = 324/599 (54%), Gaps = 25/599 (4%)
Query: 3 IVRANFKTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNG 60
I+ + L ALKF + + + S Y S+L+ C R +HAH + +
Sbjct: 252 IIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSD 311
Query: 61 YESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFS 120
+ ++ + T + YAK ++ A+ FD N S+ AMI+GY+Q + ALL+F
Sbjct: 312 FAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFH 371
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
++ SG+ ++ + S RACA ++ L G I G K ++ V +A +D+Y KC
Sbjct: 372 RLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQ 431
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+ +A+ +F+ + R+D VSWNA+I G ++ +LF SM+R ++PD FT GSIL+
Sbjct: 432 ALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILK 491
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
A GG L +IH I+K G+ S++ + SLID+Y+K G I A +++ + +S
Sbjct: 492 ACTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS 550
Query: 301 CT--------------------ALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLM 340
T ++ISG+ + S++A LF M+ + D +
Sbjct: 551 GTMEELEKMHNKRLQEMCVSWNSIISGYVMKE-QSEDAQMLFTRMMEMGITPDKFTYATV 609
Query: 341 LNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNV 400
L+ CAN+AS LG+QIHA K + D + + L+DMY+K G++ D+ F++ ++
Sbjct: 610 LDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDF 669
Query: 401 ISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTD 460
++W ++I GYA HG G EAI+L+++M E + PN VTF+S+L AC+H GL +G E F
Sbjct: 670 VTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYM 729
Query: 461 MINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIY-GNT 519
M Y + P+ H+S +VD+ + G+++ A +IR+M + +W +LG C+I+ N
Sbjct: 730 MKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNV 789
Query: 520 SLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+ E A L ++P+ S Y +LSN+Y AG W+ R+ M L+K PG S+++
Sbjct: 790 EVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVE 848
Score = 196 bits (499), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 148/556 (26%), Positives = 259/556 (46%), Gaps = 60/556 (10%)
Query: 70 KVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA 129
K+I Y+K D+ A F+ MP R+VVSW +M+SGY QNG ++ VF M R G+
Sbjct: 119 KMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEF 178
Query: 130 NQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILF 189
+ T++ L+ C+ + G I G + + ++ SALLD+YAK ++ +F
Sbjct: 179 DGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVF 238
Query: 190 ERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELM 249
+ I K+ VSW+A+I G + F+ M + S+LR+ EL
Sbjct: 239 QGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELR 298
Query: 250 KISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFA 309
Q+H +K + + + +D+YAK +++ A L+ + + S A+I+G++
Sbjct: 299 LGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYS 358
Query: 310 RDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDA 369
+++ H +A LF ++ +G D++ L + CA V L+ G QI+ A K S D
Sbjct: 359 QEE-HGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDV 417
Query: 370 AVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE 429
V NA IDMY K +A+A R FDEM ++ +SW ++IA + ++G G+E + L+ M
Sbjct: 418 CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS 477
Query: 430 GMVPNDVTFLSLLFACS----------HTGLTCEGWE-------LFTDMINKYRILPRAE 472
+ P++ TF S+L AC+ H+ + G DM +K ++ AE
Sbjct: 478 RIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAE 537
Query: 473 H--------------------------------FSCVVDLFARRGQLESA---YNMIRQM 497
++ ++ + + Q E A + + +M
Sbjct: 538 KIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEM 597
Query: 498 NIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYV--VLSNIYTAAGAWDN 555
I P ++ +L C+ + LG+ + E + V Y+ L ++Y+ G +
Sbjct: 598 GITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDV-YICSTLVDMYSKCGDLHD 656
Query: 556 ARKTRKLMEERSLRKN 571
+R LM E+SLR++
Sbjct: 657 SR----LMFEKSLRRD 668
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 134/510 (26%), Positives = 248/510 (48%), Gaps = 24/510 (4%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
D T+ +L+ C + IH ++ G ++++ ++ ++ YAK + + +
Sbjct: 178 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 237
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F +PE+N VSW+A+I+G QN AL F M + +Q Y+S LR+CA + L
Sbjct: 238 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 297
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ G + K F + V++A LD+YAKC ++DA ILF+ E + S+NAMI G
Sbjct: 298 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGY 357
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
+ + + LF +M G+ D +L + RA L + QI+ L IK L
Sbjct: 358 SQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDV 417
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ + ID+Y K ++ A++++ M + D +S A+I+ ++ + F LF M+
Sbjct: 418 CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLF-LFVSMLR 476
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
++ D+ +L C SL G +IH+ K + +++VG +LIDMY+K G I +
Sbjct: 477 SRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEE 535
Query: 388 ANR----------------AFDEMGDKNV----ISWTSLIAGYAKHGYGHEAIELYKKMK 427
A + ++M +K + +SW S+I+GY +A L+ +M
Sbjct: 536 AEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMM 595
Query: 428 HEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQL 487
G+ P+ T+ ++L C++ G ++ +I K + S +VD++++ G L
Sbjct: 596 EMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK-ELQSDVYICSTLVDMYSKCGDL 654
Query: 488 ESAYNMIRQMNIKPTASLWSAILGACSIYG 517
+ M + +++ W+A++ + +G
Sbjct: 655 HDSRLMFEK-SLRRDFVTWNAMICGYAHHG 683
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 190/414 (45%), Gaps = 42/414 (10%)
Query: 134 YSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE 193
+S + CA+ L+ G+ + F FV + LL +Y A ++F+++
Sbjct: 51 FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP 110
Query: 194 RKDVVSWNAMIGGLAMQG--FNDDSFW-----------------------------LFRS 222
+DVVSWN MI G + F +SF+ +F
Sbjct: 111 LRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVD 170
Query: 223 MMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGS 282
M R+G++ D T IL+ + QIH +++++G ++ +L+D+YAK
Sbjct: 171 MGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKR 230
Query: 283 IRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLN 342
+ ++++ + + + +S +A+I+G + +N A FK+M G+ I +L
Sbjct: 231 FVESLRVFQGIPEKNSVSWSAIIAGCVQ-NNLLSLALKFFKEMQKVNAGVSQSIYASVLR 289
Query: 343 ICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVIS 402
CA ++ L LG Q+HA A K + D V A +DMYAK + DA FD + N S
Sbjct: 290 SCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQS 349
Query: 403 WTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI 462
+ ++I GY++ +G +A+ L+ ++ G+ ++++ + AC+ EG +++ I
Sbjct: 350 YNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAI 409
Query: 463 NKYRILPRAEHFSCV----VDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
L CV +D++ + L A+ + +M + S W+AI+ A
Sbjct: 410 KSSLSLD-----VCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVS-WNAIIAA 457
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 111/263 (42%), Gaps = 39/263 (14%)
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHA------------------- 358
+F F D + + + + CA +L LG+Q HA
Sbjct: 32 SFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQ 91
Query: 359 ------------FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSL 406
F D N +I+ Y+KS ++ AN F+ M ++V+SW S+
Sbjct: 92 VYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSM 151
Query: 407 IAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYR 466
++GY ++G ++IE++ M EG+ + TF +L CS T G ++ ++ +
Sbjct: 152 LSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIH-GIVVRVG 210
Query: 467 ILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAA 526
S ++D++A+ + + + + + K + S WSAI+ C +L LA
Sbjct: 211 CDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVS-WSAIIAGCV---QNNLLSLAL 266
Query: 527 RNLFDMEPEKSVNYVVLSNIYTA 549
+ +M+ VN V +IY +
Sbjct: 267 KFFKEMQK---VNAGVSQSIYAS 286
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 332 bits (850), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 180/551 (32%), Positives = 296/551 (53%), Gaps = 1/551 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L+P + S L+ + +H+ I+ GY+SN + +I Y+ G V SAR
Sbjct: 144 LNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTV 203
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F+ + +++V W ++S Y +NGY E++L + S M +G N +T+ +AL+A +
Sbjct: 204 FEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAF 263
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ + G I K +V + V LL LY + G + DA+ +F + + DVV W+ MI
Sbjct: 264 DFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARF 323
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
GF +++ LF M + P+ FTL SIL G Q+H L++K+G +
Sbjct: 324 CQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDI 383
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
++ +LIDVYAK + +A +L+ + + +S +I G+ + +AF +F++ +
Sbjct: 384 YVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGY-ENLGEGGKAFSMFREALR 442
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
++ + +V L CA++AS++LG Q+H A K ++ AV N+LIDMYAK G+I
Sbjct: 443 NQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKF 502
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSH 447
A F+EM +V SW +LI+GY+ HG G +A+ + MK PN +TFL +L CS+
Sbjct: 503 AQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSN 562
Query: 448 TGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWS 507
GL +G E F MI + I P EH++C+V L R GQL+ A +I + +P+ +W
Sbjct: 563 AGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWR 622
Query: 508 AILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERS 567
A+L A N +A + + P+ YV++SN+Y A W N RK M+E
Sbjct: 623 AMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMG 682
Query: 568 LRKNPGYSFLQ 578
++K PG S+++
Sbjct: 683 VKKEPGLSWIE 693
Score = 198 bits (504), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 143/507 (28%), Positives = 242/507 (47%), Gaps = 20/507 (3%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
LD Y ++L+ CI K A IH I+ G +L + ++ Y K G A
Sbjct: 47 LDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD MPERN VS+ + GYA ++ + ++S + R G N ++S L+ +
Sbjct: 107 FDEMPERNNVSFVTLAQGYAC----QDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKA 162
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
+ + I K + N FV +AL++ Y+ CG ++ A +FE I KD+V W ++
Sbjct: 163 EICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCY 222
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
G+ +DS L M G P+ +T + L+AS+G +H I+K
Sbjct: 223 VENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDP 282
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
++ L+ +Y + G + A++++ M K D++ + +I+ F + + EA DLF M
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQ-NGFCNEAVDLFIRMRE 341
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ ++ L +LN CA LG Q+H K D V NALID+YAK ++
Sbjct: 342 AFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDT 401
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS- 446
A + F E+ KN +SW ++I GY G G +A ++++ + +VTF S L AC+
Sbjct: 402 AVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACAS 461
Query: 447 ----HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
G+ G + T+ K + + ++D++A+ G ++ A ++ +M
Sbjct: 462 LASMDLGVQVHGLAIKTNNAKKVAV------SNSLIDMYAKCGDIKFAQSVFNEMETIDV 515
Query: 503 ASLWSAILGACSIYGNTSLGELAARNL 529
AS W+A++ S +G LG A R L
Sbjct: 516 AS-WNALISGYSTHG---LGRQALRIL 538
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
G+D ML C + IH K S D N L++ Y K+G DA
Sbjct: 46 GLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALN 105
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
FDEM ++N +S+ +L GYA + I LY ++ EG N F S L
Sbjct: 106 LFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFL 153
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 332 bits (850), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 196/603 (32%), Positives = 317/603 (52%), Gaps = 53/603 (8%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D T+ + + C + + R HA + G+ SN+ + ++ Y++ + ARK F
Sbjct: 126 DNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVF 185
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS-GVRANQFTYSSALRACARMRWL 147
D M +VVSW ++I YA+ G + AL +FS M G R + T + L CA +
Sbjct: 186 DEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTH 245
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ + ++N+FV + L+D+YAKCG +++A +F + KDVVSWNAM+ G
Sbjct: 246 SLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGY 305
Query: 208 AMQGFNDDSFWLF-----------------------------------RSMMRQGMKPDC 232
+ G +D+ LF R M+ G+KP+
Sbjct: 306 SQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNE 365
Query: 233 FTLGSILR--ASVGGIELMKISQIHDLIIKLGLE-------SSNKLTGSLIDVYAKYGSI 283
TL S+L ASVG LM +IH IK ++ N + LID+YAK +
Sbjct: 366 VTLISVLSGCASVGA--LMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKV 423
Query: 284 RSAYQLYRSM--LKTDIISCTALISGFARDDNHSKEAFDLFKDMILK--KMGIDDVILCL 339
+A ++ S+ + D+++ T +I G+++ + +K A +L +M + + + +
Sbjct: 424 DTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANK-ALELLSEMFEEDCQTRPNAFTISC 482
Query: 340 MLNICANVASLNLGRQIHAFAFK-YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK 398
L CA++A+L +G+QIHA+A + Q++ V N LIDMYAK G I+DA FD M K
Sbjct: 483 ALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAK 542
Query: 399 NVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELF 458
N ++WTSL+ GY HGYG EA+ ++ +M+ G + VT L +L+ACSH+G+ +G E F
Sbjct: 543 NEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYF 602
Query: 459 TDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
M + + P EH++C+VDL R G+L +A +I +M ++P +W A L C I+G
Sbjct: 603 NRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGK 662
Query: 519 TSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
LGE AA + ++ +Y +LSN+Y AG W + + R LM + ++K PG S+++
Sbjct: 663 VELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVE 722
Query: 579 SSK 581
K
Sbjct: 723 GIK 725
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 154/581 (26%), Positives = 265/581 (45%), Gaps = 71/581 (12%)
Query: 3 IVRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYE 62
I A K+ Q + FS S P+ + P F K Q LIH +++ G
Sbjct: 7 IPNAAAKSHQYIKVSLFSTSAPE--ITPP-------FIHKCKTISQVKLIHQKLLSFGIL 57
Query: 63 SNLHLSTKVIIFYAKVGDVLSARKAFDRMPERN--VVSWTAMISGYAQNGYDENALLVFS 120
+ L+L++ +I Y VG + A R P + V W ++I Y NG L +F
Sbjct: 58 T-LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFG 116
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M + +T+ +AC + ++ G F+ N+FV +AL+ +Y++C
Sbjct: 117 LMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCR 176
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ-GMKPDCFTLGSIL 239
+ DA +F+ + DVVSWN++I A G + +F M + G +PD TL ++L
Sbjct: 177 SLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVL 236
Query: 240 R--ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
AS+G L K Q+H + + + + L+D+YAK G + A ++ +M D
Sbjct: 237 PPCASLGTHSLGK--QLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKD 294
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGID------------------------ 333
++S A+++G+++ ++A LF+ M +K+ +D
Sbjct: 295 VVSWNAMVAGYSQIGRF-EDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVC 353
Query: 334 -----------DVILCLMLNICANVASLNLGRQIHAFAFKYQSSY-------DAAVGNAL 375
+V L +L+ CA+V +L G++IH +A KY + V N L
Sbjct: 354 RQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQL 413
Query: 376 IDMYAKSGEIADANRAFDEMGDK--NVISWTSLIAGYAKHGYGHEAIELYKKMKHEG--M 431
IDMYAK ++ A FD + K +V++WT +I GY++HG ++A+EL +M E
Sbjct: 414 IDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQT 473
Query: 432 VPNDVTFLSLLFACSHTGLTCEGWELFTDMI-NKYRILPRAEHFSCVVDLFARRGQLESA 490
PN T L AC+ G ++ + N+ +P +C++D++A+ G + A
Sbjct: 474 RPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS-NCLIDMYAKCGSISDA 532
Query: 491 YNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD 531
+ M K + W++++ YG GE A +FD
Sbjct: 533 RLVFDNMMAKNEVT-WTSLMTG---YGMHGYGE-EALGIFD 568
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 205/446 (45%), Gaps = 52/446 (11%)
Query: 165 NLFVKSALLDLYAKCGWIEDAWILFERIERKD--VVSWNAMIGGLAMQGFNDDSFWLFRS 222
L + S L+ Y G + A L R D V WN++I G + +LF
Sbjct: 58 TLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGL 117
Query: 223 MMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLGLESSNKLTGSLIDVYAKYG 281
M PD +T + +A G I ++ + H L + G S+ + +L+ +Y++
Sbjct: 118 MHSLSWTPDNYTFPFVFKA-CGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCR 176
Query: 282 SIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI--DDVILCL 339
S+ A +++ M D++S ++I +A+ K A ++F M + G D++ L
Sbjct: 177 SLSDARKVFDEMSVWDVVSWNSIIESYAKLGK-PKVALEMFSRMT-NEFGCRPDNITLVN 234
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN 399
+L CA++ + +LG+Q+H FA + + VGN L+DMYAK G + +AN F M K+
Sbjct: 235 VLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKD 294
Query: 400 VISWTSLIAGYAKHGYGHEAIELYKKMKHE------------------------------ 429
V+SW +++AGY++ G +A+ L++KM+ E
Sbjct: 295 VVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCR 354
Query: 430 -----GMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRI-LPRAEH------FSCV 477
G+ PN+VT +S+L C+ G G E+ I KY I L + H + +
Sbjct: 355 QMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAI-KYPIDLRKNGHGDENMVINQL 413
Query: 478 VDLFARRGQLESAYNMIRQMNIKPTASL-WSAILGACSIYGNTSLGELAARNLFDMEPEK 536
+D++A+ ++++A M ++ K + W+ ++G S +G+ + +F+ + +
Sbjct: 414 IDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQT 473
Query: 537 SVNYVVLSNIYTAAGAWDNARKTRKL 562
N +S A + R +++
Sbjct: 474 RPNAFTISCALVACASLAALRIGKQI 499
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 132/512 (25%), Positives = 221/512 (43%), Gaps = 86/512 (16%)
Query: 2 NIVRANFKTGQLKQALKF------SLSC-PDTLLDPSTYMSLLQFCIDKKAERQAHLIHA 54
+I+ + K G+ K AL+ C PD + T +++L C +H
Sbjct: 198 SIIESYAKLGKPKVALEMFSRMTNEFGCRPDNI----TLVNVLPPCASLGTHSLGKQLHC 253
Query: 55 HIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAM------------ 102
+T+ N+ + ++ YAK G + A F M ++VVSW AM
Sbjct: 254 FAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFED 313
Query: 103 -----------------------ISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALR 139
ISGYAQ G AL V ML SG++ N+ T S L
Sbjct: 314 AVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLS 373
Query: 140 ACARMRWLQGGRMIQGSIQK--------GRFVENLFVKSALLDLYAKCGWIEDAWILFER 191
CA + L G+ I K G EN+ + L+D+YAKC ++ A +F+
Sbjct: 374 GCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQ-LIDMYAKCKKVDTARAMFDS 432
Query: 192 IERK--DVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG--MKPDCFTLGSILRASVGGIE 247
+ K DVV+W MIGG + G + + L M + +P+ FT+ L A
Sbjct: 433 LSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAA 492
Query: 248 LMKISQIHDLIIK-----LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCT 302
L QIH ++ + L SN LID+YAK GSI A ++ +M+ + ++ T
Sbjct: 493 LRIGKQIHAYALRNQQNAVPLFVSN----CLIDMYAKCGSISDARLVFDNMMAKNEVTWT 548
Query: 303 ALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK 362
+L++G+ + +EA +F +M +D V L ++L C++ ++ G + + +
Sbjct: 549 SLMTGYGM-HGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME---YFNR 604
Query: 363 YQSSYDAAVGN----ALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHG--- 414
++ + + G L+D+ ++G + A R +EM + + W + ++ HG
Sbjct: 605 MKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVE 664
Query: 415 YGHEAIELYKKM--KHEGMVPNDVTFLSLLFA 444
G A E ++ H+G T LS L+A
Sbjct: 665 LGEYAAEKITELASNHDG----SYTLLSNLYA 692
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 140/295 (47%), Gaps = 20/295 (6%)
Query: 250 KISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD--IISCTALISG 307
++ IH ++ G+ + N LT LI Y G + A L R +D + +LI
Sbjct: 43 QVKLIHQKLLSFGILTLN-LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRS 101
Query: 308 FARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSY 367
+ D+ + + LF M D+ + C ++S+ G HA +
Sbjct: 102 YG-DNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFIS 160
Query: 368 DAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMK 427
+ VGNAL+ MY++ ++DA + FDEM +V+SW S+I YAK G A+E++ +M
Sbjct: 161 NVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMT 220
Query: 428 HE-GMVPNDVTFLSLLFACSHTGLTCEGWELF-----TDMINKYRILPRAEHFSCVVDLF 481
+E G P+++T +++L C+ G G +L ++MI + +C+VD++
Sbjct: 221 NEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFV------GNCLVDMY 274
Query: 482 ARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEK 536
A+ G ++ A + M++K S W+A++ Y E A R M+ EK
Sbjct: 275 AKCGMMDEANTVFSNMSVKDVVS-WNAMVAG---YSQIGRFEDAVRLFEKMQEEK 325
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 331 bits (849), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 179/543 (32%), Positives = 306/543 (56%), Gaps = 20/543 (3%)
Query: 52 IHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY 111
+HA+ + G E N + ++ Y K+G + S++ R++V+W ++S QN
Sbjct: 224 VHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQ 282
Query: 112 DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFVKS 170
AL M+ GV ++FT SS L AC+ + L+ G+ + +++ G EN FV S
Sbjct: 283 LLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGS 342
Query: 171 ALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ-GMK 229
AL+D+Y C + +F+ + + + WNAMI G + + ++ LF M G+
Sbjct: 343 ALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLL 402
Query: 230 PDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQL 289
+ T+ ++ A V + IH ++K GL+ + +L+D+Y++ G I A ++
Sbjct: 403 ANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRI 462
Query: 290 YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK----------MGIDDVILCL 339
+ M D+++ +I+G+ ++H L K L++ + + + L
Sbjct: 463 FGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMT 522
Query: 340 MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKN 399
+L CA +++L G++IHA+A K + D AVG+AL+DMYAK G + + + FD++ KN
Sbjct: 523 ILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKN 582
Query: 400 VISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFT 459
VI+W +I Y HG G EAI+L + M +G+ PN+VTF+S+ ACSH+G+ EG +F
Sbjct: 583 VITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFY 642
Query: 460 DMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKP----TASLWSAILGACSI 515
M Y + P ++H++CVVDL R G+++ AY + MN+ P A WS++LGA I
Sbjct: 643 VMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQL---MNMMPRDFNKAGAWSSLLGASRI 699
Query: 516 YGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYS 575
+ N +GE+AA+NL +EP + +YV+L+NIY++AG WD A + R+ M+E+ +RK PG S
Sbjct: 700 HNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCS 759
Query: 576 FLQ 578
+++
Sbjct: 760 WIE 762
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 141/540 (26%), Positives = 264/540 (48%), Gaps = 29/540 (5%)
Query: 1 MNIVRANFKTGQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIIT 58
++++R+ ++ L++A+ + + P Y +LL+ D + IHAH+
Sbjct: 66 IDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYK 125
Query: 59 NGYE-SNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALL 117
GY ++ ++ ++ Y K GD + K FDR+ ERN VSW ++IS E AL
Sbjct: 126 FGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALE 185
Query: 118 VFSAMLRSGVRANQFTYSSALRACARMRWLQG---GRMIQG-SIQKGRFVENLFVKSALL 173
F ML V + FT S + AC+ + +G G+ + ++KG N F+ + L+
Sbjct: 186 AFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL--NSFIINTLV 243
Query: 174 DLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCF 233
+Y K G + + +L +D+V+WN ++ L ++ R M+ +G++PD F
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 234 TLGSILRASVGGIELMKIS-QIHDLIIKLGLESSNKLTGS-LIDVYAKYGSIRSAYQLYR 291
T+ S+L A +E+++ ++H +K G N GS L+D+Y + S +++
Sbjct: 304 TISSVLPA-CSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 362
Query: 292 SMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI--DDVILCLMLNICANVAS 349
M I A+I+G+++++ H KEA LF M + G+ + + ++ C +
Sbjct: 363 GMFDRKIGLWNAMIAGYSQNE-HDKEALLLFIGM-EESAGLLANSTTMAGVVPACVRSGA 420
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
+ IH F K D V N L+DMY++ G+I A R F +M D+++++W ++I G
Sbjct: 421 FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITG 480
Query: 410 YAKHGYGHEAIELYKKMKH-----------EGMVPNDVTFLSLLFACSHTGLTCEGWELF 458
Y + +A+ L KM++ + PN +T +++L +C+ +G E+
Sbjct: 481 YVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIH 540
Query: 459 TDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
I K + S +VD++A+ G L+ + + Q+ K + W+ I+ A ++GN
Sbjct: 541 AYAI-KNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVIT-WNVIIMAYGMHGN 598
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 143/281 (50%), Gaps = 12/281 (4%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L + +T ++ C+ A + IH ++ G + + + ++ Y+++G + A +
Sbjct: 402 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMR 461
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML-----------RSGVRANQFTYS 135
F +M +R++V+W MI+GY + + E+ALL+ M R ++ N T
Sbjct: 462 IFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLM 521
Query: 136 SALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERK 195
+ L +CA + L G+ I K ++ V SAL+D+YAKCG ++ + +F++I +K
Sbjct: 522 TILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK 581
Query: 196 DVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVGGIELMKISQI 254
+V++WN +I M G ++ L R MM QG+KP+ T S+ A S G+ +
Sbjct: 582 NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF 641
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLK 295
+ + G+E S+ ++D+ + G I+ AYQL M +
Sbjct: 642 YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPR 682
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 92/178 (51%), Gaps = 3/178 (1%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T M++L C A + IHA+ I N +++ + + ++ YAK G + +RK FD++
Sbjct: 519 TLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQI 578
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P++NV++W +I Y +G + A+ + M+ GV+ N+ T+ S AC+ + G
Sbjct: 579 PQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGL 638
Query: 152 MIQGSIQKGRFVENLFVKSA-LLDLYAKCGWIEDAWILFERIER--KDVVSWNAMIGG 206
I ++ VE A ++DL + G I++A+ L + R +W++++G
Sbjct: 639 RIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGA 696
>sp|Q9LR69|PPR8_ARATH Pentatricopeptide repeat-containing protein At1g03540
OS=Arabidopsis thaliana GN=PCMP-E4 PE=2 SV=1
Length = 609
Score = 331 bits (848), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 189/576 (32%), Positives = 317/576 (55%), Gaps = 10/576 (1%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
K GQL +A++ S + P Y SLLQ C + HAH++ +G E++ +
Sbjct: 38 KLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRN 97
Query: 67 LSTKVIIFYAKVGDVL-SARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
+ ++ Y K+G + R+ FD ++ +SWT+M+SGY AL VF M+
Sbjct: 98 VGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSF 157
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
G+ AN+FT SSA++AC+ + ++ GR G + F N F+ S L LY DA
Sbjct: 158 GLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDA 217
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR-QGMKPDCFTLGSILRASVG 244
+F+ + DV+ W A++ + +++ LF +M R +G+ PD T G++L A
Sbjct: 218 RRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGN 277
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
L + +IH +I G+ S+ + SL+D+Y K GS+R A Q++ M K + +S +AL
Sbjct: 278 LRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSAL 337
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
+ G+ ++ H K A ++F++M K D +L CA +A++ LG++IH +
Sbjct: 338 LGGYCQNGEHEK-AIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRG 392
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
+ V +ALID+Y KSG I A+R + +M +N+I+W ++++ A++G G EA+ +
Sbjct: 393 CFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFN 452
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
M +G+ P+ ++F+++L AC HTG+ EG F M Y I P EH+SC++DL R
Sbjct: 453 DMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRA 512
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTS-LGELAARNLFDMEPEKSVNYVVL 543
G E A N++ + + ASLW +LG C+ + S + E A+ + ++EP+ ++YV+L
Sbjct: 513 GLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLL 572
Query: 544 SNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQS 579
SN+Y A G +A RKLM R + K G S++ +
Sbjct: 573 SNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWIDA 608
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 330 bits (845), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 182/559 (32%), Positives = 307/559 (54%), Gaps = 3/559 (0%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
D D T++ +L + + +H + G + L +S +I Y K+ A
Sbjct: 310 DVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFA 369
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
R FD M ER+++SW ++I+G AQNG + A+ +F +LR G++ +Q+T +S L+A + +
Sbjct: 370 RTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSL 429
Query: 145 -RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
L + + K V + FV +AL+D Y++ +++A ILFER D+V+WNAM
Sbjct: 430 PEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAM 488
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGL 263
+ G + LF M +QG + D FTL ++ + + + Q+H IK G
Sbjct: 489 MAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGY 548
Query: 264 ESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFK 323
+ ++ ++D+Y K G + +A + S+ D ++ T +ISG ++ + AF +F
Sbjct: 549 DLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISG-CIENGEEERAFHVFS 607
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
M L + D+ + + + + +L GRQIHA A K + D VG +L+DMYAK G
Sbjct: 608 QMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCG 667
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
I DA F + N+ +W +++ G A+HG G E ++L+K+MK G+ P+ VTF+ +L
Sbjct: 668 SIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLS 727
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
ACSH+GL E ++ M Y I P EH+SC+ D R G ++ A N+I M+++ +A
Sbjct: 728 ACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASA 787
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
S++ +L AC + G+T G+ A L ++EP S YV+LSN+Y AA WD + R +M
Sbjct: 788 SMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMM 847
Query: 564 EERSLRKNPGYSFLQSSKK 582
+ ++K+PG+S+++ K
Sbjct: 848 KGHKVKKDPGFSWIEVKNK 866
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/468 (26%), Positives = 213/468 (45%), Gaps = 46/468 (9%)
Query: 53 HAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGY- 111
HA I+T L +I Y+K G + AR+ FD+MP+R++VSW ++++ YAQ+
Sbjct: 62 HARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSEC 121
Query: 112 ----DENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLF 167
+ A L+F + + V ++ T S L+ C ++ G K + F
Sbjct: 122 VVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEF 181
Query: 168 VKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG 227
V AL+++Y K G +++ +LFE + +DVV WN M+ GF +++ L + G
Sbjct: 182 VAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSG 241
Query: 228 MKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY 287
+ P+ TL + R ++G D G ++S
Sbjct: 242 LNPNEITLRLLAR----------------------------ISGDDSDA----GQVKSFA 269
Query: 288 QLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANV 347
+ ++II +S + +S F DM+ + D V LML V
Sbjct: 270 NGNDASSVSEIIFRNKGLSEYLHSGQYSA-LLKCFADMVESDVECDQVTFILMLATAVKV 328
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI 407
SL LG+Q+H A K V N+LI+MY K + A FD M ++++ISW S+I
Sbjct: 329 DSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVI 388
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDM-INKYR 466
AG A++G EA+ L+ ++ G+ P+ T S+L A S EG L + ++ +
Sbjct: 389 AGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLP---EGLSLSKQVHVHAIK 445
Query: 467 ILPRAEHF--SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
I ++ F + ++D ++R ++ A + + N A W+A++
Sbjct: 446 INNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFDLVA--WNAMMAG 491
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 110/489 (22%), Positives = 210/489 (42%), Gaps = 49/489 (10%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T +L+ C+ + H + G + + ++ ++ Y K G V + F+ M
Sbjct: 147 TLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEM 206
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
P R+VV W M+ Y + G+ E A+ + SA SG+ N+ T LR AR + G
Sbjct: 207 PYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT----LRLLAR---ISGDD 259
Query: 152 MIQGSIQK------GRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
G ++ V + ++ L Y G F + DV
Sbjct: 260 SDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVEC------ 313
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
+ +F L M+ +K D LG Q+H + +KLGL+
Sbjct: 314 -------DQVTFIL---MLATAVKVDSLALG---------------QQVHCMALKLGLDL 348
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
++ SLI++Y K A ++ +M + D+IS ++I+G A+ + EA LF +
Sbjct: 349 MLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQ-NGLEVEAVCLFMQL 407
Query: 326 ILKKMGIDDVILCLMLNICANVAS-LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
+ + D + +L +++ L+L +Q+H A K + D+ V ALID Y+++
Sbjct: 408 LRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRC 467
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
+ +A F E + ++++W +++AGY + GH+ ++L+ M +G +D T ++
Sbjct: 468 MKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKT 526
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
C +G ++ I L S ++D++ + G + +A + + P
Sbjct: 527 CGFLFAINQGKQVHAYAIKSGYDLDLWVS-SGILDMYVKCGDMSAAQFAFDSIPV-PDDV 584
Query: 505 LWSAILGAC 513
W+ ++ C
Sbjct: 585 AWTTMISGC 593
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 99/204 (48%), Gaps = 4/204 (1%)
Query: 239 LRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDI 298
LR ++ +LM H I+ L +LI +Y+K GS+ A +++ M D+
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 299 ISCTALISGFARDD----NHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGR 354
+S ++++ +A+ + ++AF LF+ + + + L ML +C + +
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASE 165
Query: 355 QIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHG 414
H +A K D V AL+++Y K G++ + F+EM ++V+ W ++ Y + G
Sbjct: 166 SFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMG 225
Query: 415 YGHEAIELYKKMKHEGMVPNDVTF 438
+ EAI+L G+ PN++T
Sbjct: 226 FKEEAIDLSSAFHSSGLNPNEITL 249
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 59/107 (55%), Gaps = 5/107 (4%)
Query: 348 ASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLI 407
+ L LG+ HA ++ + + + N LI MY+K G + A R FD+M D++++SW S++
Sbjct: 53 SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112
Query: 408 AGYAKHGYG-----HEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
A YA+ +A L++ ++ + + + +T +L C H+G
Sbjct: 113 AAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSG 159
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 326 bits (836), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 192/574 (33%), Positives = 310/574 (54%), Gaps = 12/574 (2%)
Query: 13 LKQALKFSLSCPDTLLDPST---YMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLST 69
K+ L S+ PD+ P+ Y +L + E +IH ++ +GY ++ +++
Sbjct: 94 FKRLLNCSICVPDSFTFPNVIKAYGALGR-------EFLGRMIHTLVVKSGYVCDVVVAS 146
Query: 70 KVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA 129
++ YAK ++ + FD MPER+V SW +IS + Q+G E AL +F M SG
Sbjct: 147 SLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEP 206
Query: 130 NQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILF 189
N + + A+ AC+R+ WL+ G+ I K F + +V SAL+D+Y KC +E A +F
Sbjct: 207 NSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVF 266
Query: 190 ERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELM 249
+++ RK +V+WN+MI G +G + + M+ +G +P TL SIL A L+
Sbjct: 267 QKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLL 326
Query: 250 KISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFA 309
IH +I+ + + + SLID+Y K G A ++ K S +IS +
Sbjct: 327 HGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYI 386
Query: 310 RDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDA 369
N K A +++ M+ + D V +L C+ +A+L G+QIH + + D
Sbjct: 387 SVGNWFK-AVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDE 445
Query: 370 AVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE 429
+ +AL+DMY+K G +A R F+ + K+V+SWT +I+ Y HG EA+ + +M+
Sbjct: 446 LLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKF 505
Query: 430 GMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLES 489
G+ P+ VT L++L AC H GL EG + F+ M +KY I P EH+SC++D+ R G+L
Sbjct: 506 GLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLE 565
Query: 490 AYNMIRQM-NIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYT 548
AY +I+Q A L S + AC ++ SLG+ AR L + P+ + Y+VL N+Y
Sbjct: 566 AYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYA 625
Query: 549 AAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
+ +WD AR+ R M+E LRK PG S+++ S K
Sbjct: 626 SGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDK 659
Score = 189 bits (481), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 137/523 (26%), Positives = 254/523 (48%), Gaps = 10/523 (1%)
Query: 28 LDPSTYMSLLQFCIDK-KAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
++ S +SLL+ C + K+ R+ L+H I+T G ++ L +I Y D SAR
Sbjct: 1 MESSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARH 60
Query: 87 AFDRMPER-NVVSWTAMISGYAQNGYDENALLVFSAMLRSGV-RANQFTYSSALRACARM 144
F+ R +V W +++SGY++N + L VF +L + + FT+ + ++A +
Sbjct: 61 VFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGAL 120
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
GRMI + K +V ++ V S+L+ +YAK E++ +F+ + +DV SWN +I
Sbjct: 121 GREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVI 180
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G + + LF M G +P+ +L + A + L + +IH +K G E
Sbjct: 181 SCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFE 240
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGF-ARDDNHSKEAFDLFK 323
+ +L+D+Y K + A ++++ M + +++ ++I G+ A+ D SK ++
Sbjct: 241 LDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGD--SKSCVEILN 298
Query: 324 DMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSG 383
MI++ L +L C+ +L G+ IH + + + D V +LID+Y K G
Sbjct: 299 RMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCG 358
Query: 384 EIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLF 443
E A F + SW +I+ Y G +A+E+Y +M G+ P+ VTF S+L
Sbjct: 359 EANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLP 418
Query: 444 ACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
ACS +G ++ I++ R+ S ++D++++ G + A+ + + K
Sbjct: 419 ACSQLAALEKGKQIHLS-ISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVV 477
Query: 504 SLWSAILGACSIYGNT--SLGELAARNLFDMEPEKSVNYVVLS 544
S W+ ++ A +G +L + F ++P+ VLS
Sbjct: 478 S-WTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLS 519
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 325 bits (834), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 176/565 (31%), Positives = 315/565 (55%), Gaps = 13/565 (2%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHI---ITNGYESNLHLSTKVIIFYAKVGD 80
PD P L+ C + + +IH + +T G S+L++ + +I Y K G
Sbjct: 58 PDNFTLPVA----LKACGELREVNYGEMIHGFVKKDVTLG--SDLYVGSSLIYMYIKCGR 111
Query: 81 VLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAM-LRSGVRANQFTYSSALR 139
++ A + FD + + ++V+W++M+SG+ +NG A+ F M + S V ++ T + +
Sbjct: 112 MIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVS 171
Query: 140 ACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS 199
AC ++ + GR + G + + F +L + ++LL+ YAK ++A LF+ I KDV+S
Sbjct: 172 ACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVIS 231
Query: 200 WNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLII 259
W+ +I G ++ +F MM G +P+ T+ +L+A +L + + H+L I
Sbjct: 232 WSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAI 291
Query: 260 KLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAF 319
+ GLE+ K++ +L+D+Y K S AY ++ + + D++S ALISGF + + +
Sbjct: 292 RKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLN-GMAHRSI 350
Query: 320 DLFKDMILKKMGIDDVILCL-MLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDM 378
+ F M+L+ D IL + +L C+ + L + H++ KY + +G +L+++
Sbjct: 351 EEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVEL 410
Query: 379 YAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM-KHEGMVPNDVT 437
Y++ G + +A++ F+ + K+ + WTSLI GY HG G +A+E + M K + PN+VT
Sbjct: 411 YSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVT 470
Query: 438 FLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
FLS+L ACSH GL EG +F M+N YR+ P EH++ +VDL R G L++A + ++M
Sbjct: 471 FLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRM 530
Query: 498 NIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNAR 557
PT + +LGAC I+ N + E A+ LF++E + Y+++SN+Y G W+N
Sbjct: 531 PFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVE 590
Query: 558 KTRKLMEERSLRKNPGYSFLQSSKK 582
K R +++R ++K S ++ +K
Sbjct: 591 KLRNSVKQRGIKKGLAESLIEIRRK 615
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 136/502 (27%), Positives = 240/502 (47%), Gaps = 22/502 (4%)
Query: 74 FYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFT 133
F K + AR+ F M +R++ W ++ ++ E L FS M R + + FT
Sbjct: 3 FCRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFT 62
Query: 134 YSSALRACARMRWLQGGRMIQGSIQKGRFV-ENLFVKSALLDLYAKCGWIEDAWILFERI 192
AL+AC +R + G MI G ++K + +L+V S+L+ +Y KCG + +A +F+ +
Sbjct: 63 LPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDEL 122
Query: 193 ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM-MRQGMKPDCFTLGSILRASVGGIELMKI 251
E+ D+V+W++M+ G G + FR M M + PD TL +++ A K+
Sbjct: 123 EKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACT------KL 176
Query: 252 SQ------IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALI 305
S +H +I+ G + L SL++ YAK + + A L++ + + D+IS + +I
Sbjct: 177 SNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVI 236
Query: 306 SGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQS 365
+ + + + + EA +F DM+ + + +L CA L GR+ H A +
Sbjct: 237 ACYVQ-NGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGL 295
Query: 366 SYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKK 425
+ V AL+DMY K +A F + K+V+SW +LI+G+ +G H +IE +
Sbjct: 296 ETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSI 355
Query: 426 MKHEGMV-PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
M E P+ + + +L +CS G E + F + KY + +V+L++R
Sbjct: 356 MLLENNTRPDAILMVKVLGSCSELGFL-EQAKCFHSYVIKYGFDSNPFIGASLVELYSRC 414
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLS 544
G L +A + + +K T +W++++ I+G + L N E N V
Sbjct: 415 GSLGNASKVFNGIALKDTV-VWTSLITGYGIHGKGTKA-LETFNHMVKSSEVKPNEVTFL 472
Query: 545 NIYTA---AGAWDNARKTRKLM 563
+I +A AG + KLM
Sbjct: 473 SILSACSHAGLIHEGLRIFKLM 494
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 195/389 (50%), Gaps = 13/389 (3%)
Query: 9 KTGQLKQALKF---SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNL 65
K G QA++F + D D T ++L+ C R +H +I G+ ++L
Sbjct: 139 KNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDL 198
Query: 66 HLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS 125
L ++ YAK A F + E++V+SW+ +I+ Y QNG ALLVF+ M+
Sbjct: 199 SLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDD 258
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIED 184
G N T L+ACA L+ GR +I+KG E + V +AL+D+Y KC E+
Sbjct: 259 GTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETE-VKVSTALVDMYMKCFSPEE 317
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSM-MRQGMKPDCFTLGSILR--A 241
A+ +F RI RKDVVSW A+I G + G S F M + +PD + +L +
Sbjct: 318 AYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCS 377
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC 301
+G +E K H +IK G +S+ + SL+++Y++ GS+ +A +++ + D +
Sbjct: 378 ELGFLEQAKC--FHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVW 435
Query: 302 TALISGFARDDNHSKEAFDLFKDMIL-KKMGIDDVILCLMLNICANVASLNLGRQIHAFA 360
T+LI+G+ +K A + F M+ ++ ++V +L+ C++ ++ G +I
Sbjct: 436 TSLITGYGIHGKGTK-ALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLM 494
Query: 361 FK-YQSSYDAAVGNALIDMYAKSGEIADA 388
Y+ + + L+D+ + G++ A
Sbjct: 495 VNDYRLAPNLEHYAVLVDLLGRVGDLDTA 523
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 325 bits (834), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 205/655 (31%), Positives = 335/655 (51%), Gaps = 101/655 (15%)
Query: 26 TLLDPSTYMSLLQFCIDKKAER-QAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
TLL+ T +LLQ ++K R A L+H +I +G +++L ++ Y+K G L A
Sbjct: 11 TLLELCT--NLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHA 68
Query: 85 RKAFDRMP-------------------------------ERNVVSWTAMISGYAQNGYDE 113
RK FD MP +R+ VSWT MI GY G
Sbjct: 69 RKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYH 128
Query: 114 NALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALL 173
A+ V M++ G+ QFT ++ L + A R ++ G+ + I K N+ V ++LL
Sbjct: 129 KAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLL 188
Query: 174 DLYAKCG-------------------W------------IEDAWILFERIERKDVVSWNA 202
++YAKCG W ++ A FE++ +D+V+WN+
Sbjct: 189 NMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNS 248
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGM-KPDCFTLGSILRASVGGIELMKISQIHDLIIKL 261
MI G +G++ + +F M+R + PD FTL S+L A +L QIH I+
Sbjct: 249 MISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTT 308
Query: 262 GLESSNKLTGSLIDVYAKYGSIRSAYQL-------------------------------- 289
G + S + +LI +Y++ G + +A +L
Sbjct: 309 GFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKN 368
Query: 290 -YRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVA 348
+ S+ D+++ TA+I G+ + ++ EA +LF+ M+ + L ML++ +++A
Sbjct: 369 IFVSLKDRDVVAWTAMIVGYEQHGSYG-EAINLFRSMVGGGQRPNSYTLAAMLSVASSLA 427
Query: 349 SLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLI 407
SL+ G+QIH A K Y +V NALI MYAK+G I A+RAFD + +++ +SWTS+I
Sbjct: 428 SLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMI 487
Query: 408 AGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRI 467
A+HG+ EA+EL++ M EG+ P+ +T++ + AC+H GL +G + F M + +I
Sbjct: 488 IALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKI 547
Query: 468 LPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAAR 527
+P H++C+VDLF R G L+ A I +M I+P W ++L AC ++ N LG++AA
Sbjct: 548 IPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAE 607
Query: 528 NLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
L +EPE S Y L+N+Y+A G W+ A K RK M++ ++K G+S+++ K
Sbjct: 608 RLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHK 662
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 322 bits (826), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 157/454 (34%), Positives = 270/454 (59%), Gaps = 2/454 (0%)
Query: 125 SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIED 184
S + A++ Y++ L+ C + L GR++ I + F ++ + + LL++YAKCG +E+
Sbjct: 54 SYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEE 113
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG 244
A +FE++ ++D V+W +I G + D+ F M+R G P+ FTL S+++A+
Sbjct: 114 ARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAA 173
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTAL 304
Q+H +K G +S+ + +L+D+Y +YG + A ++ ++ + +S AL
Sbjct: 174 ERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 233
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQ 364
I+G AR +++A +LF+ M+ + C++ L G+ +HA+ K
Sbjct: 234 IAGHARRSG-TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSG 292
Query: 365 SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYK 424
A GN L+DMYAKSG I DA + FD + ++V+SW SL+ YA+HG+G EA+ ++
Sbjct: 293 EKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFE 352
Query: 425 KMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARR 484
+M+ G+ PN+++FLS+L ACSH+GL EGW + +++ K I+P A H+ VVDL R
Sbjct: 353 EMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYY-ELMKKDGIVPEAWHYVTVVDLLGRA 411
Query: 485 GQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLS 544
G L A I +M I+PTA++W A+L AC ++ NT LG AA ++F+++P+ +V+L
Sbjct: 412 GDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILY 471
Query: 545 NIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
NIY + G W++A + RK M+E ++K P S+++
Sbjct: 472 NIYASGGRWNDAARVRKKMKESGVKKEPACSWVE 505
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 122/388 (31%), Positives = 211/388 (54%), Gaps = 6/388 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D Y +LL+ C K Q ++HAHI+ + + ++ + ++ YAK G + ARK F
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
++MP+R+ V+WT +ISGY+Q+ +ALL F+ MLR G N+FT SS ++A A R
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G + G K F N+ V SALLDLY + G ++DA ++F+ +E ++ VSWNA+I G A
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238
Query: 209 MQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNK 268
+ + + LF+ M+R G +P F+ S+ A L + +H +IK G +
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+L+D+YAK GSI A +++ + K D++S +L++ +A+ KEA F++M +
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQ-HGFGKEAVWWFEEM--R 355
Query: 329 KMGI--DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
++GI +++ +L C++ L+ G + K +A ++D+ ++G++
Sbjct: 356 RVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLN 415
Query: 387 DANRAFDEMG-DKNVISWTSLIAGYAKH 413
A R +EM + W +L+ H
Sbjct: 416 RALRFIEEMPIEPTAAIWKALLNACRMH 443
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 321 bits (823), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 178/556 (32%), Positives = 313/556 (56%), Gaps = 5/556 (0%)
Query: 30 PSTY--MSLLQFCIDKKAERQAHLIHAHII-TNGYESNLHLSTKVIIFYAKVGDVLSARK 86
P++Y +S L C + IHA ++ ++ + S L++ +I Y + G + A +
Sbjct: 282 PNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAER 341
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
+M +VV+W ++I GY QN + AL FS M+ +G ++++ + +S + A R+
Sbjct: 342 ILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSN 401
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
L G + + K + NL V + L+D+Y+KC F R+ KD++SW +I G
Sbjct: 402 LLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAG 461
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
A + ++ LFR + ++ M+ D LGSILRAS ++ + +IH I++ GL +
Sbjct: 462 YAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDT 521
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ L+DVY K ++ A +++ S+ D++S T++IS A + N S EA +LF+ M+
Sbjct: 522 -VIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNES-EAVELFRRMV 579
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
+ D V L +L+ A++++LN GR+IH + + + ++ A++DMYA G++
Sbjct: 580 ETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQ 639
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
A FD + K ++ +TS+I Y HG G A+EL+ KM+HE + P+ ++FL+LL+ACS
Sbjct: 640 SAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACS 699
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLW 506
H GL EG M ++Y + P EH+ C+VD+ R + A+ ++ M +PTA +W
Sbjct: 700 HAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVW 759
Query: 507 SAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEER 566
A+L AC + +GE+AA+ L ++EP+ N V++SN++ G W++ K R M+
Sbjct: 760 CALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKAS 819
Query: 567 SLRKNPGYSFLQSSKK 582
+ K+PG S+++ K
Sbjct: 820 GMEKHPGCSWIEMDGK 835
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 161/557 (28%), Positives = 286/557 (51%), Gaps = 17/557 (3%)
Query: 16 ALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFY 75
AL +++ L S++ +LL+ C + R +H+ ++ GY S + ++ Y
Sbjct: 168 ALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMY 227
Query: 76 AKVGDVLSARKAFDRMPER-NVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTY 134
AK D+ +AR+ FD E+ + V W +++S Y+ +G L +F M +G N +T
Sbjct: 228 AKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTI 287
Query: 135 SSALRACARMRWLQGGRMIQGSIQKGR-FVENLFVKSALLDLYAKCGWIEDAWILFERIE 193
SAL AC + + G+ I S+ K L+V +AL+ +Y +CG + A + ++
Sbjct: 288 VSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN 347
Query: 194 RKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ 253
DVV+WN++I G ++ F M+ G K D ++ SI+ AS L+ +
Sbjct: 348 NADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGME 407
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN 313
+H +IK G +S+ ++ +LID+Y+K + + M D+IS T +I+G+A++D
Sbjct: 408 LHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDC 467
Query: 314 HSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGN 373
H EA +LF+D+ K+M ID++IL +L + + S+ + ++IH + + D + N
Sbjct: 468 HV-EALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILR-KGLLDTVIQN 525
Query: 374 ALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVP 433
L+D+Y K + A R F+ + K+V+SWTS+I+ A +G EA+EL+++M G+
Sbjct: 526 ELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSA 585
Query: 434 NDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNM 493
+ V L +L A + +G E+ ++ K L + + VVD++A G L+SA +
Sbjct: 586 DSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVA-VVDMYACCGDLQSAKAV 644
Query: 494 IRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD------MEPEKSVNYVVLSNIY 547
++ K S I + YG G+ AA LFD + P+ ++++ L
Sbjct: 645 FDRIERKGLLQYTSMI----NAYGMHGCGK-AAVELFDKMRHENVSPDH-ISFLALLYAC 698
Query: 548 TAAGAWDNARKTRKLME 564
+ AG D R K+ME
Sbjct: 699 SHAGLLDEGRGFLKIME 715
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/415 (30%), Positives = 218/415 (52%), Gaps = 6/415 (1%)
Query: 36 LLQFCIDKKAERQAHLIHAHIITN--GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPE 93
+L+ C ++A Q +H+ I +E + L+ K++ Y K G + A K FD MP+
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDF-LAGKLVFMYGKCGSLDDAEKVFDEMPD 144
Query: 94 RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMI 153
R +W MI Y NG +AL ++ M GV ++ + L+ACA++R ++ G +
Sbjct: 145 RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSEL 204
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERK-DVVSWNAMIGGLAMQGF 212
+ K + F+ +AL+ +YAK + A LF+ + K D V WN+++ + G
Sbjct: 205 HSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGK 264
Query: 213 NDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN-KLTG 271
+ ++ LFR M G P+ +T+ S L A G +IH ++K SS +
Sbjct: 265 SLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCN 324
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
+LI +Y + G + A ++ R M D+++ +LI G+ ++ + KEA + F DMI
Sbjct: 325 ALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMY-KEALEFFSDMIAAGHK 383
Query: 332 IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRA 391
D+V + ++ +++L G ++HA+ K+ + VGN LIDMY+K RA
Sbjct: 384 SDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRA 443
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
F M DK++ISWT++IAGYA++ EA+EL++ + + M +++ S+L A S
Sbjct: 444 FLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 321 bits (823), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 179/552 (32%), Positives = 291/552 (52%), Gaps = 2/552 (0%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
+Y L + C + ++ L+H + ++ L V+ Y + + A K FD M
Sbjct: 85 SYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEM 144
Query: 92 PERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGR 151
E N VS T MIS YA+ G + A+ +FS ML SG + Y++ L++ R L GR
Sbjct: 145 SELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGR 204
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQG 211
I + + N +++ ++++Y KCGW+ A +F+++ K V+ ++ G G
Sbjct: 205 QIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAG 264
Query: 212 FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTG 271
D+ LF ++ +G++ D F +L+A EL QIH + KLGLES +
Sbjct: 265 RARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGT 324
Query: 272 SLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMG 331
L+D Y K S SA + ++ + + + +S +A+ISG+ + +EA FK + K
Sbjct: 325 PLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQF-EEAVKTFKSLRSKNAS 383
Query: 332 I-DDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANR 390
I + + C+ +A N+G Q+HA A K +ALI MY+K G + DAN
Sbjct: 384 ILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANE 443
Query: 391 AFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGL 450
F+ M + ++++WT+ I+G+A +G EA+ L++KM GM PN VTF+++L ACSH GL
Sbjct: 444 VFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGL 503
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
+G M+ KY + P +H+ C++D++AR G L+ A ++ M +P A W L
Sbjct: 504 VEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFL 563
Query: 511 GACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRK 570
C + N LGE+A L ++PE + YV+ N+YT AG W+ A + KLM ER L+K
Sbjct: 564 SGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKK 623
Query: 571 NPGYSFLQSSKK 582
S++Q K
Sbjct: 624 ELSCSWIQEKGK 635
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/457 (26%), Positives = 224/457 (49%), Gaps = 15/457 (3%)
Query: 114 NALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALL 173
A M ++GV + ++Y AC +R L GR++ ++ G ++ +++ +L
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVL 125
Query: 174 DLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCF 233
+Y +C +EDA LF+ + + VS MI A QG D + LF M+ G KP
Sbjct: 126 QMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSS 185
Query: 234 TLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
++L++ V L QIH +I+ GL S+ + ++++Y K G + A +++ M
Sbjct: 186 MYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQM 245
Query: 294 LKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLG 353
++CT L+ G+ + +++A LF D++ + + D + ++L CA++ LNLG
Sbjct: 246 AVKKPVACTGLMVGYTQ-AGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLG 304
Query: 354 RQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKH 413
+QIHA K + +VG L+D Y K A RAF E+ + N +SW+++I+GY +
Sbjct: 305 KQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQM 364
Query: 414 GYGHEAIELYKKMKHE-GMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAE 472
EA++ +K ++ + + N T+ S+ ACS G ++ D I + I +
Sbjct: 365 SQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYG 424
Query: 473 HFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFD- 531
S ++ ++++ G L+ A + M+ P W+A + + YGN S A LF+
Sbjct: 425 E-SALITMYSKCGCLDDANEVFESMD-NPDIVAWTAFISGHAYYGNAS----EALRLFEK 478
Query: 532 -----MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
M+P SV ++ + + AG + + M
Sbjct: 479 MVSCGMKP-NSVTFIAVLTACSHAGLVEQGKHCLDTM 514
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 189/386 (48%), Gaps = 4/386 (1%)
Query: 31 STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDR 90
S Y +LL+ ++ +A IHAH+I G SN + T ++ Y K G ++ A++ FD+
Sbjct: 185 SMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQ 244
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
M + V+ T ++ GY Q G +AL +F ++ GV + F +S L+ACA + L G
Sbjct: 245 MAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLG 304
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+ I + K + V + L+D Y KC E A F+ I + VSW+A+I G
Sbjct: 305 KQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQM 364
Query: 211 GFNDDSFWLFRSMMRQGMKP-DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKL 269
+++ F+S+ + + FT SI +A + Q+H IK L S
Sbjct: 365 SQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYG 424
Query: 270 TGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKK 329
+LI +Y+K G + A +++ SM DI++ TA ISG A N S EA LF+ M+
Sbjct: 425 ESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNAS-EALRLFEKMVSCG 483
Query: 330 MGIDDVILCLMLNICANVASLNLGRQ-IHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
M + V +L C++ + G+ + KY + + +ID+YA+SG + +A
Sbjct: 484 MKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEA 543
Query: 389 NRAFDEMG-DKNVISWTSLIAGYAKH 413
+ M + + +SW ++G H
Sbjct: 544 LKFMKNMPFEPDAMSWKCFLSGCWTH 569
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 150/304 (49%), Gaps = 5/304 (1%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+ G+ + ALK L D + +L+ C + IHA + G ES +
Sbjct: 262 QAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVS 321
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML-RS 125
+ T ++ FY K SA +AF + E N VSW+A+ISGY Q E A+ F ++ ++
Sbjct: 322 VGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKN 381
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
N FTY+S +AC+ + G + K + + + +SAL+ +Y+KCG ++DA
Sbjct: 382 ASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDA 441
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA-SVG 244
+FE ++ D+V+W A I G A G ++ LF M+ GMKP+ T ++L A S
Sbjct: 442 NEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHA 501
Query: 245 GIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM-LKTDIISCTA 303
G+ + ++ K + + +ID+YA+ G + A + ++M + D +S
Sbjct: 502 GLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKC 561
Query: 304 LISG 307
+SG
Sbjct: 562 FLSG 565
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 320 bits (820), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 169/498 (33%), Positives = 283/498 (56%), Gaps = 6/498 (1%)
Query: 86 KAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR 145
++F P V+ IS NG + ALL AML G Y + L AC R
Sbjct: 10 RSFSSSPTNYVLQTILPISQLCSNGRLQEALLEM-AML--GPEMGFHGYDALLNACLDKR 66
Query: 146 WLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIG 205
L+ G+ + + K R++ ++++ LL Y KC +EDA + + + K+VVSW AMI
Sbjct: 67 ALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMIS 126
Query: 206 GLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLES 265
+ G + ++ +F MMR KP+ FT ++L + + L QIH LI+K +S
Sbjct: 127 RYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDS 186
Query: 266 SNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDM 325
+ SL+D+YAK G I+ A +++ + + D++SCTA+I+G+A+ +EA ++F +
Sbjct: 187 HIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQL-GLDEEALEMFHRL 245
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ M + V +L + +A L+ G+Q H + + + A + N+LIDMY+K G +
Sbjct: 246 HSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNL 305
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV-PNDVTFLSLLFA 444
+ A R FD M ++ ISW +++ GY+KHG G E +EL++ M+ E V P+ VT L++L
Sbjct: 306 SYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSG 365
Query: 445 CSHTGLTCEGWELFTDMI-NKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTA 503
CSH + G +F M+ +Y P EH+ C+VD+ R G+++ A+ I++M KPTA
Sbjct: 366 CSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTA 425
Query: 504 SLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLM 563
+ ++LGAC ++ + +GE R L ++EPE + NYV+LSN+Y +AG W + R +M
Sbjct: 426 GVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMM 485
Query: 564 EERSLRKNPGYSFLQSSK 581
++++ K PG S++Q +
Sbjct: 486 MQKAVTKEPGRSWIQHEQ 503
Score = 216 bits (549), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 135/392 (34%), Positives = 218/392 (55%), Gaps = 7/392 (1%)
Query: 11 GQLKQAL-KFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLST 69
G+L++AL + ++ P+ + Y +LL C+DK+A R +HAH+I Y +L T
Sbjct: 34 GRLQEALLEMAMLGPE--MGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRT 91
Query: 70 KVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA 129
+++IFY K + ARK D MPE+NVVSWTAMIS Y+Q G+ AL VF+ M+RS +
Sbjct: 92 RLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKP 151
Query: 130 NQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILF 189
N+FT+++ L +C R L G+ I G I K + ++FV S+LLD+YAK G I++A +F
Sbjct: 152 NEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIF 211
Query: 190 ERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELM 249
E + +DVVS A+I G A G ++++ +F + +GM P+ T S+L A G L
Sbjct: 212 ECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLD 271
Query: 250 KISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFA 309
Q H +++ L L SLID+Y+K G++ A +L+ +M + IS A++ G++
Sbjct: 272 HGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYS 331
Query: 310 RDDNHSKEAFDLFKDMI-LKKMGIDDVILCLMLNICANVASLNLGRQIH--AFAFKYQSS 366
+ +E +LF+ M K++ D V L +L+ C++ + G I A +Y +
Sbjct: 332 K-HGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTK 390
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDK 398
++DM ++G I +A M K
Sbjct: 391 PGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 422
>sp|Q9C9I6|PP116_ARATH Pentatricopeptide repeat-containing protein At1g71490
OS=Arabidopsis thaliana GN=PCMP-E67 PE=2 SV=1
Length = 681
Score = 320 bits (820), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 192/610 (31%), Positives = 323/610 (52%), Gaps = 43/610 (7%)
Query: 8 FKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHL 67
FKT L + S D +L + SLL C+D +A +HAH I++G E + L
Sbjct: 23 FKTFSLLRLQSSSAVSDDLVLHSAA--SLLSACVDVRAFLAGVQVHAHCISSGVEYHSVL 80
Query: 68 STKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGV 127
K++ FY+ A+ + + + W +I+ YA+N E + + M+ G+
Sbjct: 81 VPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGI 140
Query: 128 RANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWI 187
R + FTY S L+AC + GR++ GSI+ + +L+V +AL+ +Y + + A
Sbjct: 141 RPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARR 200
Query: 188 LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFT------------- 234
LF+R+ +D VSWNA+I A +G ++F LF M G++ T
Sbjct: 201 LFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGN 260
Query: 235 ----LGSILR--------------------ASVGGIELMKISQIHDLIIKLGLESSNKLT 270
LG I R + +G I L K +IH L I + + +
Sbjct: 261 YVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGK--EIHGLAIHSSYDGIDNVR 318
Query: 271 GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKM 330
+LI +Y+K +R A ++R + + + ++ISG+A+ N S+EA L ++M++
Sbjct: 319 NTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQL-NKSEEASHLLREMLVAGF 377
Query: 331 GIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYD-AAVGNALIDMYAKSGEIADAN 389
+ + L +L +CA +A+L G++ H + + + D + N+L+D+YAKSG+I A
Sbjct: 378 QPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAK 437
Query: 390 RAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTG 449
+ D M ++ +++TSLI GY G G A+ L+K+M G+ P+ VT +++L ACSH+
Sbjct: 438 QVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSK 497
Query: 450 LTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAI 509
L EG LF M +Y I P +HFSC+VDL+ R G L A ++I M KP+ + W+ +
Sbjct: 498 LVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATL 557
Query: 510 LGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLR 569
L AC I+GNT +G+ AA L +M+PE YV+++N+Y AAG+W + R +M + ++
Sbjct: 558 LNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVK 617
Query: 570 KNPGYSFLQS 579
K+PG +++ +
Sbjct: 618 KDPGCAWIDT 627
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 320 bits (820), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 185/589 (31%), Positives = 307/589 (52%), Gaps = 37/589 (6%)
Query: 24 PDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYA--KVGDV 81
P T + S ++SL++ C+ + RQ H H+I G S+ + ++K+ A +
Sbjct: 24 PTTNNERSRHISLIERCV---SLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASL 80
Query: 82 LSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAML-RSGVRANQFTYSSALRA 140
ARK FD +P+ N +W +I YA ++ F M+ S N++T+ ++A
Sbjct: 81 EYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKA 140
Query: 141 CARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSW 200
A + L G+ + G K ++FV ++L+ Y CG ++ A +F I+ KDVVSW
Sbjct: 141 AAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSW 200
Query: 201 NAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIK 260
N+MI G +G D + LF+ M + +K T+ +L A L Q+ I +
Sbjct: 201 NSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEE 260
Query: 261 LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH------ 314
+ + L +++D+Y K GSI A +L+ +M + D ++ T ++ G+A +++
Sbjct: 261 NRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREV 320
Query: 315 ------------------------SKEAFDLFKDMILKK-MGIDDVILCLMLNICANVAS 349
EA +F ++ L+K M ++ + L L+ CA V +
Sbjct: 321 LNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGA 380
Query: 350 LNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAG 409
L LGR IH++ K+ + V +ALI MY+K G++ + F+ + ++V W+++I G
Sbjct: 381 LELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGG 440
Query: 410 YAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILP 469
A HG G+EA++++ KM+ + PN VTF ++ ACSHTGL E LF M + Y I+P
Sbjct: 441 LAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVP 500
Query: 470 RAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNL 529
+H++C+VD+ R G LE A I M I P+ S+W A+LGAC I+ N +L E+A L
Sbjct: 501 EEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRL 560
Query: 530 FDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
++EP +V+LSNIY G W+N + RK M L+K PG S ++
Sbjct: 561 LELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIE 609
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 320 bits (819), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 182/577 (31%), Positives = 302/577 (52%), Gaps = 40/577 (6%)
Query: 44 KAERQAHLIHAHIITNGYESNLHLSTKVII-FYAKVGDVLSARKAFDRMPERNVVSWTAM 102
K++ QA +HA I +S H S ++I Y + + A F + V++W ++
Sbjct: 19 KSKSQAKQLHAQFIRT--QSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSV 76
Query: 103 ISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRF 162
I + AL F M SG + + S L++C M L+ G + G I +
Sbjct: 77 IRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGM 136
Query: 163 VENLFVKSALLDLYAK---------------------------------CGW---IEDAW 186
+L+ +AL+++YAK C I+
Sbjct: 137 DCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVR 196
Query: 187 ILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI 246
+FE + RKDVVS+N +I G A G +D+ + R M +KPD FTL S+L +
Sbjct: 197 RVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYV 256
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
+++K +IH +I+ G++S + SL+D+YAK I + +++ + D IS +L++
Sbjct: 257 DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVA 316
Query: 307 GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSS 366
G+ ++ ++ EA LF+ M+ K+ V ++ CA++A+L+LG+Q+H + +
Sbjct: 317 GYVQNGRYN-EALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFG 375
Query: 367 YDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKM 426
+ + +AL+DMY+K G I A + FD M + +SWT++I G+A HG+GHEA+ L+++M
Sbjct: 376 SNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEM 435
Query: 427 KHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQ 486
K +G+ PN V F+++L ACSH GL E W F M Y + EH++ V DL R G+
Sbjct: 436 KRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGK 495
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNI 546
LE AYN I +M ++PT S+WS +L +CS++ N L E A +F ++ E YV++ N+
Sbjct: 496 LEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNM 555
Query: 547 YTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKN 583
Y + G W K R M ++ LRK P S+++ K
Sbjct: 556 YASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKT 592
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/439 (25%), Positives = 209/439 (47%), Gaps = 51/439 (11%)
Query: 17 LKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYA 76
++ S CPD + PS +L+ C R +H I+ G + +L+ ++ YA
Sbjct: 96 MRASGRCPDHNVFPS----VLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYA 151
Query: 77 K---------VGDVL---------------------------SARKAFDRMPERNVVSWT 100
K VG+V S R+ F+ MP ++VVS+
Sbjct: 152 KLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYN 211
Query: 101 AMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKG 160
+I+GYAQ+G E+AL + M + ++ + FT SS L + + G+ I G + +
Sbjct: 212 TIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRK 271
Query: 161 RFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLF 220
++++ S+L+D+YAK IED+ +F R+ +D +SWN+++ G G +++ LF
Sbjct: 272 GIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLF 331
Query: 221 RSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKY 280
R M+ +KP S++ A L Q+H +++ G S+ + +L+D+Y+K
Sbjct: 332 RQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKC 391
Query: 281 GSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLM 340
G+I++A +++ M D +S TA+I G A H EA LF++M + + + V +
Sbjct: 392 GNIKAARKIFDRMNVLDEVSWTAIIMGHAL-HGHGHEAVSLFEEMKRQGVKPNQVAFVAV 450
Query: 341 LNICANVASLN-----LGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEM 395
L C++V ++ + + + AAV D+ ++G++ +A +M
Sbjct: 451 LTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVA----DLLGRAGKLEEAYNFISKM 506
Query: 396 GDKNVIS-WTSLIAGYAKH 413
+ S W++L++ + H
Sbjct: 507 CVEPTGSVWSTLLSSCSVH 525
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 151/295 (51%), Gaps = 3/295 (1%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPSTYM--SLLQFCIDKKAERQAHLIHAHIITN 59
I+ ++G + AL+ T L P ++ S+L + + IH ++I
Sbjct: 212 TIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRK 271
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVF 119
G +S++++ + ++ YAK + + + F R+ R+ +SW ++++GY QNG AL +F
Sbjct: 272 GIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLF 331
Query: 120 SAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC 179
M+ + V+ +SS + ACA + L G+ + G + +G F N+F+ SAL+D+Y+KC
Sbjct: 332 RQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKC 391
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G I+ A +F+R+ D VSW A+I G A+ G ++ LF M RQG+KP+ ++L
Sbjct: 392 GNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVL 451
Query: 240 RA-SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
A S G+ + + GL + ++ D+ + G + AY M
Sbjct: 452 TACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKM 506
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 318 bits (815), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 195/583 (33%), Positives = 314/583 (53%), Gaps = 44/583 (7%)
Query: 34 MSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVI---IFYAKVGDVLSARKAFDR 90
+SLL C K + +IHA +I G + + +K+I I + A F
Sbjct: 37 LSLLHNC---KTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKT 93
Query: 91 MPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+ E N++ W M G+A + +AL ++ M+ G+ N +T+ L++CA+ + + G
Sbjct: 94 IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEG 153
Query: 151 RMIQGSI--------------------QKGRF--VENLFVKS---------ALLDLYAKC 179
+ I G + Q GR +F KS AL+ YA
Sbjct: 154 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASR 213
Query: 180 GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
G+IE+A LF+ I KDVVSWNAMI G A G ++ LF+ MM+ ++PD T+ +++
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273
Query: 240 RASV--GGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTD 297
A G IEL + Q+H I G S+ K+ +LID+Y+K G + +A L+ + D
Sbjct: 274 SACAQSGSIELGR--QVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKD 331
Query: 298 IISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIH 357
+IS LI G+ N KEA LF++M+ +DV + +L CA++ ++++GR IH
Sbjct: 332 VISWNTLIGGYTHM-NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIH 390
Query: 358 AFAFKYQSSYDAA--VGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGY 415
+ K A + +LIDMYAK G+I A++ F+ + K++ SW ++I G+A HG
Sbjct: 391 VYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGR 450
Query: 416 GHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFS 475
+ +L+ +M+ G+ P+D+TF+ LL ACSH+G+ G +F M Y++ P+ EH+
Sbjct: 451 ADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYG 510
Query: 476 CVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPE 535
C++DL G + A MI M ++P +W ++L AC ++GN LGE A NL +EPE
Sbjct: 511 CMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPE 570
Query: 536 KSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQ 578
+YV+LSNIY +AG W+ KTR L+ ++ ++K PG S ++
Sbjct: 571 NPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIE 613
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 132/390 (33%), Positives = 206/390 (52%), Gaps = 43/390 (11%)
Query: 32 TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRM 91
T+ +L+ C KA ++ IH H++ G + +L++ T +I Y + G + A K FD+
Sbjct: 136 TFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKS 195
Query: 92 PERNVVSWTAMISGYAQNGYDEN-------------------------------ALLVFS 120
P R+VVS+TA+I GYA GY EN AL +F
Sbjct: 196 PHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 255
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M+++ VR ++ T + + ACA+ ++ GR + I F NL + +AL+DLY+KCG
Sbjct: 256 DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG 315
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+E A LFER+ KDV+SWN +IGG ++ LF+ M+R G P+ T+ SIL
Sbjct: 316 ELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILP 375
Query: 241 --ASVGGIELMKISQIHDLIIKL--GLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKT 296
A +G I++ + IH I K G+ +++ L SLID+YAK G I +A+Q++ S+L
Sbjct: 376 ACAHLGAIDIGR--WIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK 433
Query: 297 DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI--DDVILCLMLNICANVASLNLGR 354
+ S A+I GFA + +FDLF M +K+GI DD+ +L+ C++ L+LGR
Sbjct: 434 SLSSWNAMIFGFAM-HGRADASFDLFSRM--RKIGIQPDDITFVGLLSACSHSGMLDLGR 490
Query: 355 QI-HAFAFKYQSSYDAAVGNALIDMYAKSG 383
I Y+ + +ID+ SG
Sbjct: 491 HIFRTMTQDYKMTPKLEHYGCMIDLLGHSG 520
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 129/237 (54%), Gaps = 4/237 (1%)
Query: 9 KTGQLKQALKFSLSCPDTLLDP--STYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLH 66
+TG K+AL+ T + P ST ++++ C + +H I +G+ SNL
Sbjct: 243 ETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLK 302
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG 126
+ +I Y+K G++ +A F+R+P ++V+SW +I GY + ALL+F MLRSG
Sbjct: 303 IVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG 362
Query: 127 VRANQFTYSSALRACARMRWLQGGRMIQGSIQKG-RFVENL-FVKSALLDLYAKCGWIED 184
N T S L ACA + + GR I I K + V N ++++L+D+YAKCG IE
Sbjct: 363 ETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEA 422
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRA 241
A +F I K + SWNAMI G AM G D SF LF M + G++PD T +L A
Sbjct: 423 AHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSA 479
>sp|Q9MA85|PP215_ARATH Pentatricopeptide repeat-containing protein At3g05340
OS=Arabidopsis thaliana GN=PCMP-E83 PE=2 SV=2
Length = 658
Score = 318 bits (815), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 182/543 (33%), Positives = 299/543 (55%), Gaps = 14/543 (2%)
Query: 52 IHAHIITNG-----YESNLHLSTKVI-----IFYAKVGDVLSARKAFDRMPERNVVSWTA 101
+HA II N ++++H + V+ YAK G ++ A K FD MP R+V+S
Sbjct: 67 LHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNI 126
Query: 102 MISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGR 161
+ G+ +N E+ ++ ML SG + T + L C + +MI
Sbjct: 127 VFYGFLRNRETESGFVLLKRMLGSG-GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSG 185
Query: 162 FVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFR 221
+ + + V + L+ Y KCG +F+ + ++V++ A+I GL ++D LF
Sbjct: 186 YDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLF- 244
Query: 222 SMMRQGM-KPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKY 280
S+MR+G+ P+ T S L A G +++ QIH L+ K G+ES + +L+D+Y+K
Sbjct: 245 SLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKC 304
Query: 281 GSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLM 340
GSI A+ ++ S + D +S T ++ G A++ + +EA F M+ + ID ++ +
Sbjct: 305 GSIEDAWTIFESTTEVDEVSMTVILVGLAQNGS-EEEAIQFFIRMLQAGVEIDANVVSAV 363
Query: 341 LNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNV 400
L + SL LG+Q+H+ K + S + V N LI+MY+K G++ D+ F M +N
Sbjct: 364 LGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNY 423
Query: 401 ISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTD 460
+SW S+IA +A+HG+G A++LY++M + P DVTFLSLL ACSH GL +G EL +
Sbjct: 424 VSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNE 483
Query: 461 MINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTS 520
M + I PR EH++C++D+ R G L+ A + I + +KP +W A+LGACS +G+T
Sbjct: 484 MKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTE 543
Query: 521 LGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSS 580
+GE AA LF P+ S +++++NIY++ G W KT K M+ + K G S ++
Sbjct: 544 VGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIE 603
Query: 581 KKN 583
K
Sbjct: 604 HKT 606
Score = 186 bits (471), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 198/395 (50%), Gaps = 15/395 (3%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
D +T +L C + +IHA I +GY+ + + K+I Y K G +S R
Sbjct: 153 FDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGV 212
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
FD M RNV++ TA+ISG +N E+ L +FS M R V N TY SAL AC+ + +
Sbjct: 213 FDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRI 272
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ I + K L ++SAL+D+Y+KCG IEDAW +FE D VS ++ GL
Sbjct: 273 VEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGL 332
Query: 208 AMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
A G +++ F M++ G++ D + ++L S L Q+H L+IK +
Sbjct: 333 AQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNT 392
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
+ LI++Y+K G + + ++R M K + +S ++I+ FAR H A L+++M
Sbjct: 393 FVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFAR-HGHGLAALKLYEEMTT 451
Query: 328 KKMGIDDVILCLMLNICANVASLNLGR-------QIHAFAFKYQSSYDAAVGNALIDMYA 380
++ DV +L+ C++V ++ GR ++H + + +IDM
Sbjct: 452 LEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHY------TCIIDMLG 505
Query: 381 KSGEIADANRAFDEMGDK-NVISWTSLIAGYAKHG 414
++G + +A D + K + W +L+ + HG
Sbjct: 506 RAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHG 540
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 318 bits (814), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 196/563 (34%), Positives = 311/563 (55%), Gaps = 16/563 (2%)
Query: 28 LDPSTYMSLLQ-FCIDKKAE----RQAHLIHAHIITNG-YESNLHLSTKVIIFYAKVGDV 81
+ P +Y+ LL F AE ++ +H H+IT G + + + ++ YAK G +
Sbjct: 306 VSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSI 365
Query: 82 LSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRAC 141
AR+ F M +++ VSW +MI+G QNG A+ + +M R + FT S+L +C
Sbjct: 366 ADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSC 425
Query: 142 ARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWN 201
A ++W + G+ I G K N+ V +AL+ LYA+ G++ + +F + D VSWN
Sbjct: 426 ASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWN 485
Query: 202 AMIGGLAMQGFN-DDSFWLFRSMMRQGMKPDCFTLGSILRASVGGI--ELMKISQIHDLI 258
++IG LA + ++ F + R G K + T S+L A EL K QIH L
Sbjct: 486 SIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGK--QIHGLA 543
Query: 259 IKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSML-KTDIISCTALISGFARDDNHSKE 317
+K + +LI Y K G + +++ M + D ++ ++ISG+ ++ +K
Sbjct: 544 LKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAK- 602
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
A DL M+ +D + +L+ A+VA+L G ++HA + + D VG+AL+D
Sbjct: 603 ALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVD 662
Query: 378 MYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND-V 436
MY+K G + A R F+ M +N SW S+I+GYA+HG G EA++L++ MK +G P D V
Sbjct: 663 MYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHV 722
Query: 437 TFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQ 496
TF+ +L ACSH GL EG++ F M + Y + PR EHFSC+ D+ R G+L+ + I +
Sbjct: 723 TFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEK 782
Query: 497 MNIKPTASLWSAILGACSIYG--NTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWD 554
M +KP +W +LGAC LG+ AA LF +EPE +VNYV+L N+Y A G W+
Sbjct: 783 MPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWE 842
Query: 555 NARKTRKLMEERSLRKNPGYSFL 577
+ K RK M++ ++K GYS++
Sbjct: 843 DLVKARKKMKDADVKKEAGYSWV 865
Score = 211 bits (538), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 147/490 (30%), Positives = 242/490 (49%), Gaps = 17/490 (3%)
Query: 34 MSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPE 93
+S +Q C+ + A H+ + N + +++L +I Y + GD +SARK FD MP
Sbjct: 7 LSFVQSCVGHRG--AARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64
Query: 94 RNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMR--WLQGGR 151
RN VSW ++SGY++NG + AL+ M++ G+ +NQ+ + S LRAC + + GR
Sbjct: 65 RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGR 124
Query: 152 MIQGSIQKGRFVENLFVKSALLDLYAKC-GWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
I G + K + + V + L+ +Y KC G + A F IE K+ VSWN++I +
Sbjct: 125 QIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQA 184
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIE--LMKISQIHDLIIKLGLESSNK 268
G +F +F SM G +P +T GS++ + E + + QI I K GL +
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLF 244
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
+ L+ +AK GS+ A +++ M + ++ L+ G R +EA LF DM
Sbjct: 245 VGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVR-QKWGEEATKLFMDMN-S 302
Query: 329 KMGIDDVILCLMLN-----ICANVASLNLGRQIHAFAFKYQ-SSYDAAVGNALIDMYAKS 382
+ + ++L+ A L GR++H + +GN L++MYAK
Sbjct: 303 MIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKC 362
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
G IADA R F M DK+ +SW S+I G ++G EA+E YK M+ ++P T +S L
Sbjct: 363 GSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSL 422
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
+C+ G ++ + + K I + ++ L+A G L + M
Sbjct: 423 SSCASLKWAKLGQQIHGESL-KLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQ 481
Query: 503 ASLWSAILGA 512
S W++I+GA
Sbjct: 482 VS-WNSIIGA 490
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 199/418 (47%), Gaps = 11/418 (2%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
D L T +S L C K + IH + G + N+ +S ++ YA+ G +
Sbjct: 410 DILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNEC 469
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYD-ENALLVFSAMLRSGVRANQFTYSSALRACAR 143
RK F MPE + VSW ++I A++ A++ F R+G + N+ T+SS L A +
Sbjct: 470 RKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSS 529
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERI-ERKDVVSWNA 202
+ + + G+ I G K + ++AL+ Y KCG ++ +F R+ ER+D V+WN+
Sbjct: 530 LSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNS 589
Query: 203 MIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLG 262
MI G + L M++ G + D F ++L A L + ++H ++
Sbjct: 590 MISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRAC 649
Query: 263 LESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
LES + +L+D+Y+K G + A + + +M + S ++ISG+AR +EA LF
Sbjct: 650 LESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYAR-HGQGEEALKLF 708
Query: 323 KDMILK-KMGIDDVILCLMLNICANVASLNLG-RQIHAFAFKYQSSYDAAVGNALIDMYA 380
+ M L + D V +L+ C++ L G + + + Y + + + D+
Sbjct: 709 ETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLG 768
Query: 381 KSGEIADANRAFDEMGDK-NVISWTSLI-----AGYAKHGYGHEAIELYKKMKHEGMV 432
++GE+ ++M K NV+ W +++ A K G +A E+ +++ E V
Sbjct: 769 RAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAV 826
>sp|Q9C9H9|PP114_ARATH Pentatricopeptide repeat-containing protein At1g71420
OS=Arabidopsis thaliana GN=PCMP-H70 PE=2 SV=1
Length = 745
Score = 318 bits (814), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 193/593 (32%), Positives = 318/593 (53%), Gaps = 24/593 (4%)
Query: 4 VRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGY-- 61
+R ++G +++A+ S P L Y +L Q C +++ +H H++++ Y
Sbjct: 33 LRTLVRSGDIRRAVSLFYSAPVELQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCY 92
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSA 121
N+ L+ +I YAK G++L AR+ FD MPERNVVSWTA+I+GY Q G ++ +FS+
Sbjct: 93 SQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSS 152
Query: 122 MLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKC-- 179
ML S N+FT SS L +C + G+ + G K +++V +A++ +Y +C
Sbjct: 153 ML-SHCFPNEFTLSSVLTSCR----YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHD 207
Query: 180 -GWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI 238
+AW +FE I+ K++V+WN+MI + +F M G+ D TL +I
Sbjct: 208 GAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNI 267
Query: 239 LRASVGGIELM--KIS----QIHDLIIKLGLESSNKLTGSLIDVYAK-YGSIRSAYQLYR 291
+ +L+ ++S Q+H L +K GL + ++ +LI VY++ Y+L+
Sbjct: 268 CSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFM 327
Query: 292 SMLKT-DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASL 350
M DI++ +I+ FA D + A LF + +K+ D +L CA + +
Sbjct: 328 EMSHCRDIVAWNGIITAFAVYD--PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTA 385
Query: 351 NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGY 410
IHA K D + N+LI YAK G + R FD+M ++V+SW S++ Y
Sbjct: 386 RHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAY 445
Query: 411 AKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPR 470
+ HG + +++KM + P+ TF++LL ACSH G EG +F M K LP+
Sbjct: 446 SLHGQVDSILPVFQKMD---INPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQ 502
Query: 471 AEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLF 530
H++CV+D+ +R + A +I+QM + P A +W A+LG+C +GNT LG+LAA L
Sbjct: 503 LNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLK 562
Query: 531 DM-EPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
++ EP S++Y+ +SNIY A G+++ A + K ME +RK P S+ + K
Sbjct: 563 ELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNK 615
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 317 bits (812), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 178/558 (31%), Positives = 313/558 (56%), Gaps = 9/558 (1%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D TY +++ + + IHA +I G+ S++++ +I Y K+G A K F
Sbjct: 129 DTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVF 188
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ MPER++VSW +MISGY G ++L++F ML+ G + ++F+ SAL AC+ + +
Sbjct: 189 EEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPK 248
Query: 149 GGRMIQGSIQKGRF-VENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ I + R ++ V +++LD+Y+K G + A +F + ++++V+WN MIG
Sbjct: 249 MGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCY 308
Query: 208 AMQGFNDDSFWLFRSMMRQ-GMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
A G D+F F+ M Q G++PD T ++L AS +++ IH ++ G
Sbjct: 309 ARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLPH 364
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD-DNHSKEAFDLFKDM 325
L +LID+Y + G ++SA ++ M + ++IS ++I+ + ++ N+S A +LF+++
Sbjct: 365 MVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYS--ALELFQEL 422
Query: 326 ILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEI 385
+ D + +L A SL+ GR+IHA+ K + + + N+L+ MYA G++
Sbjct: 423 WDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDL 482
Query: 386 ADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFAC 445
DA + F+ + K+V+SW S+I YA HG+G ++ L+ +M + PN TF SLL AC
Sbjct: 483 EDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAAC 542
Query: 446 SHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASL 505
S +G+ EGWE F M +Y I P EH+ C++DL R G +A + +M PTA +
Sbjct: 543 SISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARI 602
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
W ++L A + + ++ E AA +F ME + + YV+L N+Y AG W++ + + LME
Sbjct: 603 WGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMES 662
Query: 566 RSLRKNPGYSFLQSSKKN 583
+ + + S +++ K+
Sbjct: 663 KGISRTSSRSTVEAKGKS 680
Score = 206 bits (523), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 134/435 (30%), Positives = 230/435 (52%), Gaps = 7/435 (1%)
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
A + FD M + + W MI G+ G A+ +S M+ +GV+A+ FTY +++ A
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 144 MRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAM 203
+ L+ G+ I + K FV +++V ++L+ LY K G DA +FE + +D+VSWN+M
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 204 IGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGL 263
I G G S LF+ M++ G KPD F+ S L A +IH ++ +
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI 262
Query: 264 ESSNKLT-GSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLF 322
E+ + + S++D+Y+KYG + A +++ M++ +I++ +I +AR + +AF F
Sbjct: 263 ETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYAR-NGRVTDAFLCF 321
Query: 323 KDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKS 382
+ M + DVI +N+ A L GR IH +A + + ALIDMY +
Sbjct: 322 QKMSEQNGLQPDVITS--INLLPASAILE-GRTIHGYAMRRGFLPHMVLETALIDMYGEC 378
Query: 383 GEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLL 442
G++ A FD M +KNVISW S+IA Y ++G + A+EL++++ +VP+ T S+L
Sbjct: 379 GQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASIL 438
Query: 443 FACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPT 502
A + + EG E+ ++ K R + +V ++A G LE A + +K
Sbjct: 439 PAYAESLSLSEGREIHAYIV-KSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDV 497
Query: 503 ASLWSAILGACSIYG 517
S W++I+ A +++G
Sbjct: 498 VS-WNSIIMAYAVHG 511
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 179/341 (52%), Gaps = 13/341 (3%)
Query: 176 YAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTL 235
+A +EDA LF+ + + D WN MI G G ++ + M+ G+K D FT
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 236 GSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLK 295
++++ G L + +IH ++IKLG S + SLI +Y K G A +++ M +
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 296 TDIISCTALISGF-ARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGR 354
DI+S ++ISG+ A D S + LFK+M+ D L C++V S +G+
Sbjct: 194 RDIVSWNSMISGYLALGDGFS--SLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGK 251
Query: 355 QIHAFAFKYQ-SSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKH 413
+IH A + + + D V +++DMY+K GE++ A R F+ M +N+++W +I YA++
Sbjct: 252 EIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARN 311
Query: 414 GYGHEAIELYKKMKHE-GMVPNDVTFLSLLFACS-HTGLTCEGWELFTDMINKYRILPRA 471
G +A ++KM + G+ P+ +T ++LL A + G T G+ + + LP
Sbjct: 312 GRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAM------RRGFLPHM 365
Query: 472 EHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGA 512
+ ++D++ GQL+SA + +M K S W++I+ A
Sbjct: 366 VLETALIDMYGECGQLKSAEVIFDRMAEKNVIS-WNSIIAA 405
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 315 bits (806), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 190/567 (33%), Positives = 305/567 (53%), Gaps = 52/567 (9%)
Query: 41 IDKKAERQAHLIHAHIITNGYESNLHLSTKVIIF-----------------YAKVGDVLS 83
D+ ER L+ +++ GY N +L +F YA+ G V
Sbjct: 118 FDEMPERD--LVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDD 175
Query: 84 ARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACAR 143
AR FDRMPE+N VSW A++S Y QN E A ++F + R N A
Sbjct: 176 ARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKS------RENW----------AL 219
Query: 144 MRW--LQGGRMIQGSIQKGR-FVENLFVK-----SALLDLYAKCGWIEDAWILFERIERK 195
+ W L GG + + I + R F +++ V+ + ++ YA+ G I++A LF+ +
Sbjct: 220 VSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ 279
Query: 196 DVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIH 255
DV +W AM+ G +++ LF M + + + ++L V G + ++
Sbjct: 280 DVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELF 335
Query: 256 DLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHS 315
D++ + + N ++I YA+ G I A L+ M K D +S A+I+G+++ HS
Sbjct: 336 DVMPCRNVSTWN----TMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQS-GHS 390
Query: 316 KEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNAL 375
EA LF M + ++ L+ CA+V +L LG+Q+H K VGNAL
Sbjct: 391 FEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNAL 450
Query: 376 IDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPND 435
+ MY K G I +AN F EM K+++SW ++IAGY++HG+G A+ ++ MK EG+ P+D
Sbjct: 451 LLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDD 510
Query: 436 VTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIR 495
T +++L ACSHTGL +G + F M Y ++P ++H++C+VDL R G LE A+N+++
Sbjct: 511 ATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMK 570
Query: 496 QMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDN 555
M +P A++W +LGA ++GNT L E AA +F MEPE S YV+LSN+Y ++G W +
Sbjct: 571 NMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGD 630
Query: 556 ARKTRKLMEERSLRKNPGYSFLQSSKK 582
K R M ++ ++K PGYS+++ K
Sbjct: 631 VGKLRVRMRDKGVKKVPGYSWIEIQNK 657
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/469 (25%), Positives = 219/469 (46%), Gaps = 40/469 (8%)
Query: 72 IIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQ 131
I Y + G A + F RMP + VS+ MISGY +NG E A +F M +
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL---- 126
Query: 132 FTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFER 191
+++ ++ R R L R + + + ++ + +L YA+ G ++DA +F+R
Sbjct: 127 VSWNVMIKGYVRNRNLGKARELFEIMPE----RDVCSWNTMLSGYAQNGCVDDARSVFDR 182
Query: 192 IERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKI 251
+ K+ VSWNA++ +++ LF+S + LG ++ ++++
Sbjct: 183 MPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKK----KIVEA 238
Query: 252 SQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARD 311
Q D + + S N ++I YA+ G I A QL+ D+ + TA++SG+ +
Sbjct: 239 RQFFDSMNVRDVVSWN----TIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQ- 293
Query: 312 DNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAV 371
+ +EA +LF M + ++V ML + + +++ F + +
Sbjct: 294 NRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKEL----FDVMPCRNVST 345
Query: 372 GNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGM 431
N +I YA+ G+I++A FD+M ++ +SW ++IAGY++ G+ EA+ L+ +M+ EG
Sbjct: 346 WNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGG 405
Query: 432 VPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVD-----LFARRGQ 486
N +F S L C+ G +L R++ C V ++ + G
Sbjct: 406 RLNRSSFSSALSTCADVVALELGKQLHG------RLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 487 LESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPE 535
+E A ++ ++M K S W+ ++ S +G GE+A R M+ E
Sbjct: 460 IEEANDLFKEMAGKDIVS-WNTMIAGYSRHG---FGEVALRFFESMKRE 504
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 2/186 (1%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L+ S++ S L C D A +H ++ GYE+ + +++ Y K G + A
Sbjct: 407 LNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDL 466
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F M +++VSW MI+GY+++G+ E AL F +M R G++ + T + L AC+ +
Sbjct: 467 FKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLV 526
Query: 148 QGGRM-IQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIE-RKDVVSWNAMIG 205
GR Q + N + ++DL + G +EDA L + + D W ++G
Sbjct: 527 DKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLG 586
Query: 206 GLAMQG 211
+ G
Sbjct: 587 ASRVHG 592
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 97/236 (41%), Gaps = 40/236 (16%)
Query: 361 FKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAI 420
FK + + N +I Y ++GE A + FDEM +++++SW +I GY ++ +A
Sbjct: 87 FKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKAR 146
Query: 421 ELYKKMKHEGMV---------------------------PNDVTFLSLLFACSHTGLTCE 453
EL++ M + NDV++ +LL A E
Sbjct: 147 ELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEE 206
Query: 454 GWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGAC 513
LF N + ++C++ F ++ ++ A MN++ S W+ I
Sbjct: 207 ACMLFKSRENWALV-----SWNCLLGGFVKKKKIVEARQFFDSMNVRDVVS-WNTI---- 256
Query: 514 SIYGNTSLGEL-AARNLFDMEPEKSV-NYVVLSNIYTAAGAWDNARKTRKLMEERS 567
I G G++ AR LFD P + V + + + Y + AR+ M ER+
Sbjct: 257 -ITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERN 311
Score = 34.3 bits (77), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 66/142 (46%), Gaps = 14/142 (9%)
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
N I Y ++G +A R F M + +S+ +I+GY ++G A +L+ +M +V
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV 127
Query: 433 PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAE--HFSCVVDLFARRGQLESA 490
+V ++ + ELF I+P + ++ ++ +A+ G ++ A
Sbjct: 128 SWNV----MIKGYVRNRNLGKARELF-------EIMPERDVCSWNTMLSGYAQNGCVDDA 176
Query: 491 YNMIRQMNIKPTASLWSAILGA 512
++ +M K S W+A+L A
Sbjct: 177 RSVFDRMPEKNDVS-WNALLSA 197
Score = 33.9 bits (76), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 68/173 (39%), Gaps = 46/173 (26%)
Query: 396 GDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGW 455
GD ++ W I+ Y + G +EA+ ++K+M V
Sbjct: 60 GDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVS---------------------- 97
Query: 456 ELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSI 515
+ MI+ Y R G+ E A + +M + S W+ ++
Sbjct: 98 --YNGMISGY----------------LRNGEFELARKLFDEMPERDLVS-WNVMIKG--Y 136
Query: 516 YGNTSLGELAARNLFDMEPEKSV-NYVVLSNIYTAAGAWDNARKTRKLMEERS 567
N +LG+ AR LF++ PE+ V ++ + + Y G D+AR M E++
Sbjct: 137 VRNRNLGK--ARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKN 187
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 314 bits (805), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 178/557 (31%), Positives = 300/557 (53%), Gaps = 4/557 (0%)
Query: 29 DPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
D +T +++L C ++ +H + + L L+ ++ Y+K G + +A+ F
Sbjct: 291 DVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF 350
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSG--VRANQFTYSSALRACARMRW 146
+NVVSW M+ G++ G V ML G V+A++ T +A+ C +
Sbjct: 351 KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESF 410
Query: 147 LQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGG 206
L + + K FV N V +A + YAKCG + A +F I K V SWNA+IGG
Sbjct: 411 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 470
Query: 207 LAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESS 266
A S M G+ PD FT+ S+L A L ++H II+ LE
Sbjct: 471 HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD 530
Query: 267 NKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI 326
+ S++ +Y G + + L+ +M ++S +I+G+ ++ A +F+ M+
Sbjct: 531 LFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQN-GFPDRALGVFRQMV 589
Query: 327 LKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIA 386
L + + + + + C+ + SL LGR+ HA+A K+ DA + +LIDMYAK+G I
Sbjct: 590 LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSIT 649
Query: 387 DANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS 446
+++ F+ + +K+ SW ++I GY HG EAI+L+++M+ G P+D+TFL +L AC+
Sbjct: 650 QSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACN 709
Query: 447 HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMI-RQMNIKPTASL 505
H+GL EG M + + + P +H++CV+D+ R GQL+ A ++ +M+ + +
Sbjct: 710 HSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGI 769
Query: 506 WSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
W ++L +C I+ N +GE A LF++EPEK NYV+LSN+Y G W++ RK R+ M E
Sbjct: 770 WKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNE 829
Query: 566 RSLRKNPGYSFLQSSKK 582
SLRK+ G S+++ ++K
Sbjct: 830 MSLRKDAGCSWIELNRK 846
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 134/504 (26%), Positives = 248/504 (49%), Gaps = 11/504 (2%)
Query: 21 LSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGD 80
+S D L D TY +++ C +H ++ G ++ + ++ FY G
Sbjct: 178 ISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGF 237
Query: 81 VLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS----GVRANQFTYSS 136
V A + FD MPERN+VSW +MI ++ NG+ E + L+ M+ + T +
Sbjct: 238 VTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVT 297
Query: 137 ALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKD 196
L CAR R + G+ + G K R + L + +AL+D+Y+KCG I +A ++F+ K+
Sbjct: 298 VLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKN 357
Query: 197 VVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG--MKPDCFTLGSILRASVGGIELMKISQI 254
VVSWN M+GG + +G +F + R M+ G +K D T+ + + L + ++
Sbjct: 358 VVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKEL 417
Query: 255 HDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNH 314
H +K + + + + YAK GS+ A +++ + + S ALI G A+ N
Sbjct: 418 HCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ-SND 476
Query: 315 SKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNA 374
+ + D M + + D +C +L+ C+ + SL LG+++H F + D V +
Sbjct: 477 PRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLS 536
Query: 375 LIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPN 434
++ +Y GE+ FD M DK+++SW ++I GY ++G+ A+ ++++M G+
Sbjct: 537 VLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLC 596
Query: 435 DVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSC-VVDLFARRGQLESAYNM 493
++ + + ACS G E + +L +C ++D++A+ G + + +
Sbjct: 597 GISMMPVFGACSLLPSLRLGREAHAYALK--HLLEDDAFIACSLIDMYAKNGSITQSSKV 654
Query: 494 IRQMNIKPTASLWSAILGACSIYG 517
+ K TAS W+A++ I+G
Sbjct: 655 FNGLKEKSTAS-WNAMIMGYGIHG 677
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 146/548 (26%), Positives = 257/548 (46%), Gaps = 54/548 (9%)
Query: 67 LSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRS- 125
L T++I YA G +R FD + +N+ W A+IS Y++N + L F M+ +
Sbjct: 122 LCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTT 181
Query: 126 GVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDA 185
+ + FTY ++ACA M + G + G + K VE++FV +AL+ Y G++ DA
Sbjct: 182 DLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDA 241
Query: 186 WILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQ----GMKPDCFTLGSILRA 241
LF+ + +++VSWN+MI + GF+++SF L MM + PD TL ++L
Sbjct: 242 LQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPV 301
Query: 242 SVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISC 301
E+ +H +KL L+ L +L+D+Y+K G I +A +++ +++S
Sbjct: 302 CAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSW 361
Query: 302 TALISGF-ARDDNHSKEAFDLFKDMIL--KKMGIDDVILCLMLNICANVASLNLGRQIHA 358
++ GF A D H FD+ + M+ + + D+V + + +C + + L +++H
Sbjct: 362 NTMVGGFSAEGDTHG--TFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHC 419
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHE 418
++ K + Y+ V NA + YAK G ++ A R F + K V SW +LI G+A+
Sbjct: 420 YSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRL 479
Query: 419 AIELYKKMKHEGMVPNDVTFLSLLFACS-------------------------------- 446
+++ + +MK G++P+ T SLL ACS
Sbjct: 480 SLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLS 539
Query: 447 ---HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM---NIK 500
H G C LF M +K + ++ V+ + + G + A + RQM I+
Sbjct: 540 LYIHCGELCTVQALFDAMEDKSLV-----SWNTVITGYLQNGFPDRALGVFRQMVLYGIQ 594
Query: 501 PTASLWSAILGACSIYGNTSLG-ELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKT 559
+ GACS+ + LG E A L + + + L ++Y G+ + K
Sbjct: 595 LCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKV 654
Query: 560 RKLMEERS 567
++E+S
Sbjct: 655 FNGLKEKS 662
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 202/432 (46%), Gaps = 21/432 (4%)
Query: 25 DTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSA 84
D D T ++ + C + +H + + + N ++ + YAK G + A
Sbjct: 390 DVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYA 449
Query: 85 RKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARM 144
++ F + + V SW A+I G+AQ+ +L M SG+ + FT S L AC+++
Sbjct: 450 QRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKL 509
Query: 145 RWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMI 204
+ L+ G+ + G I + +LFV ++L LY CG + LF+ +E K +VSWN +I
Sbjct: 510 KSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVI 569
Query: 205 GGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLE 264
G GF D + +FR M+ G++ ++ + A L + H +K LE
Sbjct: 570 TGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLE 629
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ SLID+YAK GSI + +++ + + S A+I G+ +KEA LF++
Sbjct: 630 DDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGI-HGLAKEAIKLFEE 688
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLG-----RQIHAFAFKYQSSYDAAVGNALIDMY 379
M DD+ +L C + ++ G + +F K + A V IDM
Sbjct: 689 MQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACV----IDML 744
Query: 380 AKSGEIADANRAF-DEMGDK-NVISWTSLIAGYAKHGYGHEAIELYKKM-----KHEGMV 432
++G++ A R +EM ++ +V W SL++ H+ +E+ +K+ + E
Sbjct: 745 GRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRI----HQNLEMGEKVAAKLFELEPEK 800
Query: 433 PNDVTFLSLLFA 444
P + LS L+A
Sbjct: 801 PENYVLLSNLYA 812
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 13/144 (9%)
Query: 305 ISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAF-AFKY 363
+ F DD S +AF L ++ L L+L + +GR+IH +
Sbjct: 66 VQEFVGDDESSSDAFLLVREA-----------LGLLLQASGKRKDIEMGRKIHQLVSGST 114
Query: 364 QSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELY 423
+ D + +I MYA G D+ FD + KN+ W ++I+ Y+++ E +E +
Sbjct: 115 RLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETF 174
Query: 424 KKM-KHEGMVPNDVTFLSLLFACS 446
+M ++P+ T+ ++ AC+
Sbjct: 175 IEMISTTDLLPDHFTYPCVIKACA 198
>sp|Q9LND4|PPR14_ARATH Pentatricopeptide repeat-containing protein At1g06140,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E61 PE=2
SV=1
Length = 558
Score = 314 bits (805), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 182/547 (33%), Positives = 300/547 (54%), Gaps = 8/547 (1%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMP-- 92
+LL K +HA +I +G+E + L + + Y + + A +F+R+P
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 93 ERNVVSWTAMISGYAQNGYD--ENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGG 150
+RN SW ++SGY+++ + LL+++ M R + F A++AC + L+ G
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128
Query: 151 RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQ 210
+I G K ++ +V +L+++YA+ G +E A +F+ I ++ V W ++ G
Sbjct: 129 ILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKY 188
Query: 211 GFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQ-IHDLIIKLG-LESSNK 268
+ + F LF M G+ D TL +++A G + K+ + +H + I+ ++ S+
Sbjct: 189 SKDPEVFRLFCLMRDTGLALDALTLICLVKA-CGNVFAGKVGKCVHGVSIRRSFIDQSDY 247
Query: 269 LTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILK 328
L S+ID+Y K + +A +L+ + + +++ T LISGFA+ + + EAFDLF+ M+ +
Sbjct: 248 LQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCE-RAVEAFDLFRQMLRE 306
Query: 329 KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADA 388
+ + L +L C+++ SL G+ +H + + DA + IDMYA+ G I A
Sbjct: 307 SILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMA 366
Query: 389 NRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHT 448
FD M ++NVISW+S+I + +G EA++ + KMK + +VPN VTF+SLL ACSH+
Sbjct: 367 RTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHS 426
Query: 449 GLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSA 508
G EGW+ F M Y ++P EH++C+VDL R G++ A + I M +KP AS W A
Sbjct: 427 GNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGA 486
Query: 509 ILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEERSL 568
+L AC I+ L A L MEPEKS YV+LSNIY AG W+ R+ M +
Sbjct: 487 LLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGY 546
Query: 569 RKNPGYS 575
RK+ G S
Sbjct: 547 RKHVGQS 553
Score = 82.4 bits (202), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 87/180 (48%), Gaps = 2/180 (1%)
Query: 27 LLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARK 86
L + T ++L C + R +H ++I NG E + T I YA+ G++ AR
Sbjct: 309 LPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMART 368
Query: 87 AFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRW 146
FD MPERNV+SW++MI+ + NG E AL F M V N T+ S L AC+
Sbjct: 369 VFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGN 428
Query: 147 LQGG-RMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS-WNAMI 204
++ G + + + V + ++DL + G I +A + + K + S W A++
Sbjct: 429 VKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALL 488
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 313 bits (801), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 184/559 (32%), Positives = 301/559 (53%), Gaps = 5/559 (0%)
Query: 28 LDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKA 87
L +++ L C + IH ++ G ++ ++ T ++ Y+K G V A
Sbjct: 270 LVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETV 329
Query: 88 FDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWL 147
F + ++ + W AM++ YA+N Y +AL +F M + V + FT S+ + C+ +
Sbjct: 330 FSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLY 389
Query: 148 QGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGL 207
G+ + + K ++SALL LY+KCG DA+++F+ +E KD+V+W ++I GL
Sbjct: 390 NYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGL 449
Query: 208 AMQGFNDDSFWLFRSMMRQ--GMKPDCFTLGSILRASVGGIELMKIS-QIHDLIIKLGLE 264
G ++ +F M +KPD + S+ A G+E ++ Q+H +IK GL
Sbjct: 450 CKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNA-CAGLEALRFGLQVHGSMIKTGLV 508
Query: 265 SSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKD 324
+ + SLID+Y+K G A +++ SM ++++ ++IS ++R+ N + + DLF
Sbjct: 509 LNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRN-NLPELSIDLFNL 567
Query: 325 MILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGE 384
M+ + + D V + +L ++ ASL G+ +H + + D + NALIDMY K G
Sbjct: 568 MLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGF 627
Query: 385 IADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFA 444
A F +M K++I+W +I GY HG A+ L+ +MK G P+DVTFLSL+ A
Sbjct: 628 SKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISA 687
Query: 445 CSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTAS 504
C+H+G EG +F M Y I P EH++ +VDL R G LE AY+ I+ M I+ +S
Sbjct: 688 CNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSS 747
Query: 505 LWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
+W +L A + N LG L+A L MEPE+ YV L N+Y AG + A K LM+
Sbjct: 748 IWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMK 807
Query: 565 ERSLRKNPGYSFLQSSKKN 583
E+ L K PG S+++ S +
Sbjct: 808 EKGLHKQPGCSWIEVSDRT 826
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 142/533 (26%), Positives = 269/533 (50%), Gaps = 27/533 (5%)
Query: 47 RQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER-NVVSWTAMISG 105
+ IH ++ N +++ L T +I Y K G + A + F + ++ NVV W MI G
Sbjct: 187 EEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVG 246
Query: 106 YAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVEN 165
+ +G E++L ++ + V+ +++ AL AC++ GR I + K +
Sbjct: 247 FGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHND 306
Query: 166 LFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMR 225
+V ++LL +Y+KCG + +A +F + K + WNAM+ A + + LF M +
Sbjct: 307 PYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQ 366
Query: 226 QGMKPDCFTLGSILR-ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIR 284
+ + PD FTL +++ SV G+ S +H + K ++S++ + +L+ +Y+K G
Sbjct: 367 KSVLPDSFTLSNVISCCSVLGLYNYGKS-VHAELFKRPIQSTSTIESALLTLYSKCGCDP 425
Query: 285 SAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMI--LKKMGIDDVILCLMLN 342
AY +++SM + D+++ +LISG ++ KEA +F DM + D I+ + N
Sbjct: 426 DAYLVFKSMEEKDMVAWGSLISGLCKNGKF-KEALKVFGDMKDDDDSLKPDSDIMTSVTN 484
Query: 343 ICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVIS 402
CA + +L G Q+H K + VG++LID+Y+K G A + F M +N+++
Sbjct: 485 ACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVA 544
Query: 403 WTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMI 462
W S+I+ Y+++ +I+L+ M +G+ P+ V+ S+L A S T +G L
Sbjct: 545 WNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSL----- 599
Query: 463 NKYRI---LPRAEHF-SCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGN 518
+ Y + +P H + ++D++ + G + A N+ ++M K + W+ + IYG
Sbjct: 600 HGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLIT-WNLM-----IYGY 653
Query: 519 TSLGE-LAARNLFDM-----EPEKSVNYVVLSNIYTAAGAWDNARKTRKLMEE 565
S G+ + A +LFD E V ++ L + +G + + + M++
Sbjct: 654 GSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQ 706
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 148/549 (26%), Positives = 262/549 (47%), Gaps = 32/549 (5%)
Query: 4 VRANFKTGQLKQAL----KFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITN 59
+RA + G+ QAL K S P T+ SLL+ C IH ++
Sbjct: 31 IRALIQKGEYLQALHLYSKHDGSSP-FWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVL 89
Query: 60 GYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPE-------RNVVSWTAMISGYAQNGYD 112
G+ + ++T ++ Y K G + A + FD + R+V W +MI GY +
Sbjct: 90 GWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRF 149
Query: 113 ENALLVFSAMLRSGVRANQFTYSSALRA-CARMRWL-QGGRMIQGSIQKGRFVENLFVKS 170
+ + F ML GVR + F+ S + C + + G+ I G + + + F+K+
Sbjct: 150 KEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKT 209
Query: 171 ALLDLYAKCGWIEDAWILFERIERK-DVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMK 229
AL+D+Y K G DAW +F IE K +VV WN MI G G + S L+ +K
Sbjct: 210 ALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVK 269
Query: 230 --PDCFT--LGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRS 285
FT LG+ ++ G QIH ++K+GL + + SL+ +Y+K G +
Sbjct: 270 LVSTSFTGALGACSQSENSGFG----RQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGE 325
Query: 286 AYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
A ++ ++ + A+++ +A +D + A DLF M K + D L +++ C+
Sbjct: 326 AETVFSCVVDKRLEIWNAMVAAYAEND-YGYSALDLFGFMRQKSVLPDSFTLSNVISCCS 384
Query: 346 NVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTS 405
+ N G+ +HA FK + + +AL+ +Y+K G DA F M +K++++W S
Sbjct: 385 VLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGS 444
Query: 406 LIAGYAKHGYGHEAIELYKKMK--HEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMIN 463
LI+G K+G EA++++ MK + + P+ S+ AC+ G ++ MI
Sbjct: 445 LISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMI- 503
Query: 464 KYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGE 523
K ++ S ++DL+++ G E A + M+ + + W++++ S Y +L E
Sbjct: 504 KTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVA-WNSMI---SCYSRNNLPE 559
Query: 524 LAARNLFDM 532
L+ +LF++
Sbjct: 560 LSI-DLFNL 567
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 143/290 (49%), Gaps = 5/290 (1%)
Query: 9 KTGQLKQALKF--SLSCPDTLLDPST--YMSLLQFCIDKKAERQAHLIHAHIITNGYESN 64
K G+ K+ALK + D L P + S+ C +A R +H +I G N
Sbjct: 451 KNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLN 510
Query: 65 LHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLR 124
+ + + +I Y+K G A K F M N+V+W +MIS Y++N E ++ +F+ ML
Sbjct: 511 VFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLS 570
Query: 125 SGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIED 184
G+ + + +S L A + L G+ + G + + +K+AL+D+Y KCG+ +
Sbjct: 571 QGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKY 630
Query: 185 AWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILRASVG 244
A +F++++ K +++WN MI G G + LF M + G PD T S++ A
Sbjct: 631 AENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNH 690
Query: 245 GIELMKISQIHDLIIK-LGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSM 293
+ + I + + + G+E + + +++D+ + G + AY ++M
Sbjct: 691 SGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAM 740
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 165/381 (43%), Gaps = 47/381 (12%)
Query: 233 FTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRS 292
FT S+L+A L IH ++ LG + SL+++Y K G + A Q++
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 293 MLKT-------DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICA 345
++ D+ ++I G+ + KE F+ M++ + D L +++++
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRF-KEGVGCFRRMLVFGVRPDAFSLSIVVSVMC 179
Query: 346 NVASL--NLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDK-NVIS 402
+ G+QIH F + D+ + ALIDMY K G DA R F E+ DK NV+
Sbjct: 180 KEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVL 239
Query: 403 WTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTD-- 460
W +I G+ G +++LY K+ + +F L ACS + + G ++ D
Sbjct: 240 WNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVV 299
Query: 461 ----------------MINKYRILPRAEH-FSCVVD--------LFARRGQLESAYN--- 492
M +K ++ AE FSCVVD + A + + Y+
Sbjct: 300 KMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALD 359
Query: 493 ---MIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYV--VLSNIY 547
+RQ ++ P + S ++ CS+ G + G+ LF P +S + + L +Y
Sbjct: 360 LFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFK-RPIQSTSTIESALLTLY 418
Query: 548 TAAGAWDNARKTRKLMEERSL 568
+ G +A K MEE+ +
Sbjct: 419 SKCGCDPDAYLVFKSMEEKDM 439
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 312 bits (800), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 190/570 (33%), Positives = 312/570 (54%), Gaps = 16/570 (2%)
Query: 19 FSLSCPDTLLDPS--TYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYA 76
FSL + L P T+ S+L+ C + + IH + G+ +++++ +I Y+
Sbjct: 140 FSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYS 196
Query: 77 KVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRA-NQFTYS 135
+ V +AR FD MP R++ SW AMISGY Q+G + AL L +G+RA + T
Sbjct: 197 RYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL-----TLSNGLRAMDSVTVV 251
Query: 136 SALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERK 195
S L AC G I K LFV + L+DLYA+ G + D +F+R+ +
Sbjct: 252 SLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR 311
Query: 196 DVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSI--LRASVGGIELMKISQ 253
D++SWN++I + + LF+ M ++PDC TL S+ + + +G I + Q
Sbjct: 312 DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQ 371
Query: 254 IHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDN 313
L LE + +++ +YAK G + SA ++ + TD+IS +ISG+A++
Sbjct: 372 GFTLRKGWFLEDIT-IGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQN-G 429
Query: 314 HSKEAFDLFKDMILK-KMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG 372
+ EA +++ M + ++ + +L C+ +L G ++H K D V
Sbjct: 430 FASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVV 489
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
+L DMY K G + DA F ++ N + W +LIA + HG+G +A+ L+K+M EG+
Sbjct: 490 TSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVK 549
Query: 433 PNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYN 492
P+ +TF++LL ACSH+GL EG F M Y I P +H+ C+VD++ R GQLE+A
Sbjct: 550 PDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALK 609
Query: 493 MIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSVNYVVLSNIYTAAGA 552
I+ M+++P AS+W A+L AC ++GN LG++A+ +LF++EPE +V+LSN+Y +AG
Sbjct: 610 FIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGK 669
Query: 553 WDNARKTRKLMEERSLRKNPGYSFLQSSKK 582
W+ + R + + LRK PG+S ++ K
Sbjct: 670 WEGVDEIRSIAHGKGLRKTPGWSSMEVDNK 699
Score = 215 bits (548), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 148/536 (27%), Positives = 281/536 (52%), Gaps = 21/536 (3%)
Query: 35 SLLQFCIDKKAERQAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAFDRMPER 94
+L ++C + ++ A +HA ++ + N+ +S K++ Y +G+V AR FD + R
Sbjct: 59 TLFRYCTNLQS---AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR 115
Query: 95 NVVSWTAMISGYAQNGYDENALLVFSA-MLRSGVRANQFTYSSALRACARMRWLQGGRMI 153
+V +W MISGY + G + FS ML SG+ + T+ S L+AC R + G I
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKI 172
Query: 154 QGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLAMQGFN 213
K F+ +++V ++L+ LY++ + +A ILF+ + +D+ SWNAMI G G
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNA 232
Query: 214 DDSFWLFRSMMRQGMKP-DCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSNKLTGS 272
++ + G++ D T+ S+L A + + IH IK GLES ++
Sbjct: 233 KEAL-----TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNK 287
Query: 273 LIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMILKKMGI 332
LID+YA++G +R +++ M D+IS ++I + ++ + A LF++M L ++
Sbjct: 288 LIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLR-AISLFQEMRLSRIQP 346
Query: 333 DDVILCLMLNICANVASLNLGRQIHAFAF-KYQSSYDAAVGNALIDMYAKSGEIADANRA 391
D + L + +I + + + R + F K D +GNA++ MYAK G + A
Sbjct: 347 DCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAV 406
Query: 392 FDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEG-MVPNDVTFLSLLFACSHTGL 450
F+ + + +VISW ++I+GYA++G+ EAIE+Y M+ EG + N T++S+L ACS G
Sbjct: 407 FNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGA 466
Query: 451 TCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIKPTASLWSAIL 510
+G +L ++ K + + + D++ + G+LE A ++ Q+ + + W+ ++
Sbjct: 467 LRQGMKLHGRLL-KNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLI 524
Query: 511 GACSIYGNTSLGELAARNLFD--MEPEKSVNYVVLSNIYTAAGAWDNARKTRKLME 564
+G+ + + + D ++P+ + +V L + + +G D + ++M+
Sbjct: 525 ACHGFHGHGEKAVMLFKEMLDEGVKPDH-ITFVTLLSACSHSGLVDEGQWCFEMMQ 579
Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 211/416 (50%), Gaps = 19/416 (4%)
Query: 9 KTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGYESNLHLS 68
++G K+AL +LS +D T +SLL C + + IH++ I +G ES L +S
Sbjct: 228 QSGNAKEAL--TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVS 285
Query: 69 TKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVR 128
K+I YA+ G + +K FDRM R+++SW ++I Y N A+ +F M S ++
Sbjct: 286 NKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQ 345
Query: 129 ANQFTYSSALRACARMRWLQGGRMIQG-SIQKGRFVENLFVKSALLDLYAKCGWIEDAWI 187
+ T S +++ ++ R +QG +++KG F+E++ + +A++ +YAK G ++ A
Sbjct: 346 PDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARA 405
Query: 188 LFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQG-MKPDCFTLGSILRASVGGI 246
+F + DV+SWN +I G A GF ++ ++ M +G + + T S+L A
Sbjct: 406 VFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAG 465
Query: 247 ELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALIS 306
L + ++H ++K GL + SL D+Y K G + A L+ + + + + LI+
Sbjct: 466 ALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIA 525
Query: 307 --GFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFK-Y 363
GF H ++A LFK+M+ + + D + +L+ C++ ++ G+ + F+
Sbjct: 526 CHGF---HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQ----WCFEMM 578
Query: 364 QSSYDAAVG----NALIDMYAKSGEIADANRAFDEMG-DKNVISWTSLIAGYAKHG 414
Q+ Y ++DMY ++G++ A + M + W +L++ HG
Sbjct: 579 QTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHG 634
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 312 bits (799), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 182/532 (34%), Positives = 286/532 (53%), Gaps = 9/532 (1%)
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNGYDENALLVFSA 121
E N+ ++ YAK + AR+ FD +P+ + VS+ +ISGYA A+++F
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKR 130
Query: 122 MLRSGVRANQFTYSSALRACA-RMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M + G + FT S + AC R+ ++ S G F V +A + Y+K G
Sbjct: 131 MRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVS---GGFDSYSSVNNAFVTYYSKGG 187
Query: 181 WIEDAWILFERI-ERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSIL 239
+ +A +F + E +D VSWN+MI + L++ M+ +G K D FTL S+L
Sbjct: 188 LLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVL 247
Query: 240 RASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAY---QLYRSMLKT 296
A L+ Q H +IK G ++ + LID Y+K G Y ++++ +L
Sbjct: 248 NALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSP 307
Query: 297 DIISCTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQI 356
D++ +ISG++ ++ S+EA F+ M DD + + C+N++S + +QI
Sbjct: 308 DLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQI 367
Query: 357 HAFAFK-YQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGY 415
H A K + S +V NALI +Y KSG + DA FD M + N +S+ +I GYA+HG+
Sbjct: 368 HGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGH 427
Query: 416 GHEAIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFS 475
G EA+ LY++M G+ PN +TF+++L AC+H G EG E F M ++I P AEH+S
Sbjct: 428 GTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYS 487
Query: 476 CVVDLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPE 535
C++DL R G+LE A I M KP + W+A+LGAC + N +L E AA L M+P
Sbjct: 488 CMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPL 547
Query: 536 KSVNYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFLQSSKKNILLL 587
+ YV+L+N+Y A W+ RK M + +RK PG S+++ KK + +
Sbjct: 548 AATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFV 599
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 313 NHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVG 372
N + F F+D++LK + D L G+ +HA K + +
Sbjct: 2 NQTPWKFKTFRDLLLKSVAERD---------------LFTGKSLHALYVKSIVASSTYLS 46
Query: 373 NALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMV 432
N +++Y+K G ++ A AF + NV S+ ++ YAK H A +L+ ++
Sbjct: 47 NHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQ---- 102
Query: 433 PNDVTFLSLL 442
P+ V++ +L+
Sbjct: 103 PDTVSYNTLI 112
>sp|Q84MA3|PP345_ARATH Pentatricopeptide repeat-containing protein At4g32430,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2
SV=1
Length = 763
Score = 311 bits (797), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 177/579 (30%), Positives = 305/579 (52%), Gaps = 10/579 (1%)
Query: 2 NIVRANFKTGQLKQALKFSLSCPDTLLDPSTYMSLLQFCIDKKAERQAHLIHAHIITNGY 61
N + + F Q+ + + D TY + L FC+ + + + ++ G
Sbjct: 146 NTILSGFDDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGL 205
Query: 62 ESNLHLSTKVIIFYAKVGDVLSARKAFDRMPERNVVSWTAMISGYAQNG-YDENALLVFS 120
ES+L + I Y++ G AR+ FD M ++++SW +++SG +Q G + A+++F
Sbjct: 206 ESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFR 265
Query: 121 AMLRSGVRANQFTYSSALRACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCG 180
M+R GV + +++S + C L+ R I G K + L V + L+ Y+KCG
Sbjct: 266 DMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCG 325
Query: 181 WIEDAWILFERIERKDVVSWNAMIGGLAMQGFNDDSFWLFRSMMRQGMKPDCFTLGSILR 240
+E +F ++ ++VVSW MI DD+ +F +M G+ P+ T ++
Sbjct: 326 VLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEVTFVGLIN 380
Query: 241 ASVGGIELMKISQIHDLIIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIIS 300
A ++ + +IH L IK G S + S I +YAK+ ++ A + + + +IIS
Sbjct: 381 AVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIIS 440
Query: 301 CTALISGFARDDNHSKEAFDLFKDMILKKMGIDDVILCLMLNICANVASLNL--GRQIHA 358
A+ISGFA++ S EA +F + M ++ +LN A +++ G++ HA
Sbjct: 441 WNAMISGFAQN-GFSHEALKMFLSAAAETMP-NEYTFGSVLNAIAFAEDISVKQGQRCHA 498
Query: 359 FAFKYQSSYDAAVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHE 418
K + V +AL+DMYAK G I ++ + F+EM KN WTS+I+ Y+ HG
Sbjct: 499 HLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFET 558
Query: 419 AIELYKKMKHEGMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVV 478
+ L+ KM E + P+ VTFLS+L AC+ G+ +G+E+F MI Y + P EH+SC+V
Sbjct: 559 VMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMV 618
Query: 479 DLFARRGQLESAYNMIRQMNIKPTASLWSAILGACSIYGNTSLGELAARNLFDMEPEKSV 538
D+ R G+L+ A ++ ++ P S+ ++LG+C ++GN +G A +M+PE S
Sbjct: 619 DMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSG 678
Query: 539 NYVVLSNIYTAAGAWDNARKTRKLMEERSLRKNPGYSFL 577
+YV + NIY WD A + RK M ++++ K G+S++
Sbjct: 679 SYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWI 717
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 138/498 (27%), Positives = 257/498 (51%), Gaps = 29/498 (5%)
Query: 33 YMSLLQFCIDKKAER----QAHLIHAHIITNGYESNLHLSTKVIIFYAKVGDVLSARKAF 88
+M + C+ KA R + IH T+G+ S + +S V+ Y K G +A F
Sbjct: 75 HMDEVTLCLALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIF 134
Query: 89 DRMPERNVVSWTAMISGYAQNGYDENALLVFSAMLRSGVRANQFTYSSALRACARMRWLQ 148
+ + + +VVSW ++SG+ N + AL M +GV + FTYS+AL C
Sbjct: 135 ENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFL 191
Query: 149 GGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVSWNAMIGGLA 208
G +Q ++ K +L V ++ + +Y++ G A +F+ + KD++SWN+++ GL+
Sbjct: 192 LGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLS 251
Query: 209 MQG-FNDDSFWLFRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDLIIKLGLESSN 267
+G F ++ +FR MMR+G++ D + S++ +L QIH L IK G ES
Sbjct: 252 QEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLL 311
Query: 268 KLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKEAFDLFKDMIL 327
++ L+ Y+K G + + ++ M + +++S T +IS +DD A +F +M
Sbjct: 312 EVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS-NKDD-----AVSIFLNMRF 365
Query: 328 KKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALIDMYAKSGEIAD 387
+ ++V ++N + G +IH K + +VGN+ I +YAK + D
Sbjct: 366 DGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALED 425
Query: 388 ANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVTFLSLLFACS- 446
A +AF+++ + +ISW ++I+G+A++G+ HEA++++ E M PN+ TF S+L A +
Sbjct: 426 AKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAF 484
Query: 447 ------HTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQMNIK 500
G C L +N ++ A ++D++A+RG ++ + + +M+ K
Sbjct: 485 AEDISVKQGQRCHA-HLLKLGLNSCPVVSSA-----LLDMYAKRGNIDESEKVFNEMSQK 538
Query: 501 PTASLWSAILGACSIYGN 518
+W++I+ A S +G+
Sbjct: 539 -NQFVWTSIISAYSSHGD 555
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 203/433 (46%), Gaps = 20/433 (4%)
Query: 84 ARKAFDRMPERN-VVSWTAMISGYAQNGYDENALLVFSAMLRSGV---RANQFTYSSALR 139
A K FD +RN S IS + AL +F L+ G ++ T AL+
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 140 ACARMRWLQGGRMIQGSIQKGRFVENLFVKSALLDLYAKCGWIEDAWILFERIERKDVVS 199
AC L+ G I G F + V +A++ +Y K G ++A +FE + DVVS
Sbjct: 87 ACRGD--LKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVS 144
Query: 200 WNAMIGGLAMQGFNDDSFWL--FRSMMRQGMKPDCFTLGSILRASVGGIELMKISQIHDL 257
WN + + GF+D+ L M G+ D FT + L VG + Q+
Sbjct: 145 WNTI-----LSGFDDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQST 199
Query: 258 IIKLGLESSNKLTGSLIDVYAKYGSIRSAYQLYRSMLKTDIISCTALISGFARDDNHSKE 317
++K GLES + S I +Y++ GS R A +++ M D+IS +L+SG +++ E
Sbjct: 200 VVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFE 259
Query: 318 AFDLFKDMILKKMGIDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDAAVGNALID 377
A +F+DM+ + + +D V ++ C + L L RQIH K VGN L+
Sbjct: 260 AVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMS 319
Query: 378 MYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHEGMVPNDVT 437
Y+K G + F +M ++NV+SWT++I+ +A+ ++ M+ +G+ PN+VT
Sbjct: 320 RYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKD-----DAVSIFLNMRFDGVYPNEVT 374
Query: 438 FLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLESAYNMIRQM 497
F+ L+ A EG ++ I K + + + L+A+ LE A +
Sbjct: 375 FVGLINAVKCNEQIKEGLKIHGLCI-KTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDI 433
Query: 498 NIKPTASLWSAIL 510
+ S W+A++
Sbjct: 434 TFREIIS-WNAMI 445
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 10/208 (4%)
Query: 313 NHSKEAFDLFKDMI-LKKMG--IDDVILCLMLNICANVASLNLGRQIHAFAFKYQSSYDA 369
N A +FK+ + L G +D+V LCL L C L G QIH F+ +
Sbjct: 54 NSPARALSIFKENLQLGYFGRHMDEVTLCLALKACR--GDLKRGCQIHGFSTTSGFTSFV 111
Query: 370 AVGNALIDMYAKSGEIADANRAFDEMGDKNVISWTSLIAGYAKHGYGHEAIELYKKMKHE 429
V NA++ MY K+G +A F+ + D +V+SW ++++G+ + A+ +MK
Sbjct: 112 CVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSA 168
Query: 430 GMVPNDVTFLSLLFACSHTGLTCEGWELFTDMINKYRILPRAEHFSCVVDLFARRGQLES 489
G+V + T+ + L C + G +L + ++ K + + + +++R G
Sbjct: 169 GVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVV-KTGLESDLVVGNSFITMYSRSGSFRG 227
Query: 490 AYNMIRQMNIKPTASLWSAILGACSIYG 517
A + +M+ K S W+++L S G
Sbjct: 228 ARRVFDEMSFKDMIS-WNSLLSGLSQEG 254
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 206,967,931
Number of Sequences: 539616
Number of extensions: 8177905
Number of successful extensions: 25610
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 18060
Number of HSP's gapped (non-prelim): 2157
length of query: 590
length of database: 191,569,459
effective HSP length: 123
effective length of query: 467
effective length of database: 125,196,691
effective search space: 58466854697
effective search space used: 58466854697
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)