BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>038528
MSWADEDDIRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDDSYFEPVI
GAYTSISDLILGFDRKVLQSAFKRAVLLLGY

High Scoring Gene Products

Symbol, full name Information P value
AT4G36700 protein from Arabidopsis thaliana 2.9e-16
AT2G18540 protein from Arabidopsis thaliana 2.3e-15

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  038528
        (91 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2115390 - symbol:AT4G36700 "AT4G36700" species...   210  2.9e-16   1
TAIR|locus:2046273 - symbol:AT2G18540 "AT2G18540" species...   204  2.3e-15   1


>TAIR|locus:2115390 [details] [associations]
            symbol:AT4G36700 "AT4G36700" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0045735
            "nutrient reservoir activity" evidence=IEA;ISS] InterPro:IPR006045
            Pfam:PF00190 SMART:SM00835 GO:GO:0045735 Gene3D:2.60.120.10
            InterPro:IPR014710 InterPro:IPR011051 SUPFAM:SSF51182 EMBL:CP002687
            IPI:IPI00528137 RefSeq:NP_195388.2 UniGene:At.28140
            ProteinModelPortal:F4JQG6 PRIDE:F4JQG6 EnsemblPlants:AT4G36700.1
            GeneID:829823 KEGG:ath:AT4G36700 OMA:WACEISI Uniprot:F4JQG6
        Length = 522

 Score = 210 (79.0 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 43/84 (51%), Positives = 60/84 (71%)

Query:     1 MSWADEDDIRTLDIRRGDVYRLQPGSVFYIESNLEQE--REKLRIYAIFSNTEDDSYFEP 58
             ++W DE+  ++ +IR GDVYRL+PGSVFY++S         KL++YAIFSN  D+   +P
Sbjct:   113 LNWVDEE-AKSTEIRLGDVYRLRPGSVFYLQSKPVDIFLGTKLKLYAIFSNN-DECLHDP 170

Query:    59 VIGAYTSISDLILGFDRKVLQSAF 82
               GAY+SI+DL+ GFD  +LQSAF
Sbjct:   171 CFGAYSSITDLMFGFDETILQSAF 194


>TAIR|locus:2046273 [details] [associations]
            symbol:AT2G18540 "AT2G18540" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0045735
            "nutrient reservoir activity" evidence=IEA] InterPro:IPR006045
            Pfam:PF00190 SMART:SM00835 GO:GO:0045735 Gene3D:2.60.120.10
            InterPro:IPR014710 InterPro:IPR011051 SUPFAM:SSF51182 EMBL:CP002685
            IPI:IPI00526783 RefSeq:NP_179444.2 UniGene:At.52809
            ProteinModelPortal:F4IQK5 SMR:F4IQK5 PRIDE:F4IQK5
            EnsemblPlants:AT2G18540.1 GeneID:816369 KEGG:ath:AT2G18540
            OMA:HADMVFY Uniprot:F4IQK5
        Length = 707

 Score = 204 (76.9 bits), Expect = 2.3e-15, P = 2.3e-15
 Identities = 41/82 (50%), Positives = 60/82 (73%)

Query:     1 MSWADEDDIRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDDSYFEPVI 60
             ++W DE+  R L++RRGDV+RL+ G+VFY+ SN     EKLR+YAIF+  +     +P +
Sbjct:   103 LNWIDEESERKLELRRGDVFRLRSGTVFYVHSN-----EKLRVYAIFNVGK--CLNDPCL 155

Query:    61 GAYTSISDLILGFDRKVLQSAF 82
             GAY+S+ DL+LGFD + L+SAF
Sbjct:   156 GAYSSVRDLLLGFDDRTLRSAF 177


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.141   0.402    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       91        91   0.00091  102 3  11 22  0.47    29
                                                     29  0.39    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  504 (54 KB)
  Total size of DFA:  97 KB (2070 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.22u 0.23s 11.45t   Elapsed:  00:00:01
  Total cpu time:  11.22u 0.23s 11.45t   Elapsed:  00:00:01
  Start:  Sat May 11 11:04:23 2013   End:  Sat May 11 11:04:24 2013

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