Query 038528
Match_columns 91
No_of_seqs 102 out of 207
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 20:53:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038528.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038528hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fz3_A Prunin; TREE NUT allerg 99.9 2.3E-25 8E-30 180.6 7.7 82 6-90 168-292 (531)
2 3kgl_A Cruciferin; 11S SEED gl 99.9 1.1E-24 3.8E-29 174.3 7.9 80 8-90 143-240 (466)
3 3qac_A 11S globulin SEED stora 99.9 4.1E-24 1.4E-28 171.0 9.3 81 7-90 127-232 (465)
4 3ksc_A LEGA class, prolegumin; 99.9 2.2E-23 7.4E-28 167.9 9.6 80 8-90 108-211 (496)
5 3s7i_A Allergen ARA H 1, clone 99.9 5.7E-23 1.9E-27 162.2 9.0 88 1-90 77-165 (418)
6 2d5f_A Glycinin A3B4 subunit; 99.9 4.5E-22 1.6E-26 159.7 7.9 79 9-90 112-225 (493)
7 3c3v_A Arachin ARAH3 isoform; 99.9 5E-22 1.7E-26 160.3 8.1 79 9-90 125-264 (510)
8 1fxz_A Glycinin G1; proglycini 99.9 1.5E-21 5.2E-26 156.0 9.3 80 8-90 111-222 (476)
9 2e9q_A 11S globulin subunit be 99.8 1.4E-21 4.9E-26 155.7 7.9 79 9-90 126-230 (459)
10 1dgw_A Canavalin; duplicated s 99.8 2E-20 6.7E-25 131.4 8.7 87 2-90 75-162 (178)
11 2phl_A Phaseolin; plant SEED s 99.8 7.7E-20 2.6E-24 143.6 8.8 88 1-90 85-178 (397)
12 2cav_A Protein (canavalin); vi 99.8 7.2E-20 2.5E-24 145.2 8.7 87 2-90 120-207 (445)
13 2ea7_A 7S globulin-1; beta bar 99.8 1.3E-19 4.5E-24 143.2 9.1 87 2-90 95-182 (434)
14 1uij_A Beta subunit of beta co 99.8 4.2E-19 1.4E-23 139.4 9.1 87 2-90 83-170 (416)
15 3s7i_A Allergen ARA H 1, clone 99.3 1.1E-12 3.6E-17 103.6 6.1 71 11-90 333-403 (418)
16 1dgw_Y Canavalin; duplicated s 99.3 1.1E-11 3.6E-16 80.8 8.0 73 9-90 5-77 (93)
17 2vqa_A SLL1358 protein, MNCA; 99.1 1E-10 3.5E-15 87.7 7.7 80 2-90 87-167 (361)
18 2e9q_A 11S globulin subunit be 99.1 2.1E-10 7.2E-15 91.4 6.6 80 1-90 356-437 (459)
19 1uij_A Beta subunit of beta co 99.0 5E-10 1.7E-14 87.9 7.8 72 10-90 305-378 (416)
20 3ksc_A LEGA class, prolegumin; 99.0 6.9E-10 2.4E-14 89.4 8.2 80 1-90 392-473 (496)
21 3kgl_A Cruciferin; 11S SEED gl 99.0 7.2E-10 2.5E-14 88.8 8.0 80 1-90 357-438 (466)
22 3c3v_A Arachin ARAH3 isoform; 99.0 1.1E-09 3.8E-14 88.5 8.3 79 2-90 407-487 (510)
23 1fxz_A Glycinin G1; proglycini 99.0 1.5E-09 5.1E-14 86.8 8.5 79 2-90 373-453 (476)
24 1fi2_A Oxalate oxidase, germin 98.9 1.6E-09 5.5E-14 76.5 6.0 69 11-90 120-191 (201)
25 2phl_A Phaseolin; plant SEED s 98.9 1.2E-09 4.3E-14 85.6 5.1 73 9-90 289-366 (397)
26 2ea7_A 7S globulin-1; beta bar 98.9 7.4E-09 2.5E-13 81.7 8.7 71 11-90 322-394 (434)
27 2vqa_A SLL1358 protein, MNCA; 98.8 7.6E-09 2.6E-13 77.5 7.3 69 10-90 278-346 (361)
28 3qac_A 11S globulin SEED stora 98.8 4.5E-09 1.5E-13 84.2 6.3 80 1-90 357-438 (465)
29 2cav_A Protein (canavalin); vi 98.8 1.3E-08 4.5E-13 80.6 8.2 72 10-90 336-407 (445)
30 3fz3_A Prunin; TREE NUT allerg 98.7 1.6E-08 5.3E-13 82.3 6.7 79 2-90 429-509 (531)
31 2d5f_A Glycinin A3B4 subunit; 98.7 1.6E-08 5.4E-13 81.2 5.3 76 2-90 402-479 (493)
32 1j58_A YVRK protein; cupin, de 98.6 4.8E-08 1.7E-12 73.9 6.1 78 3-90 114-192 (385)
33 1j58_A YVRK protein; cupin, de 98.6 5.6E-08 1.9E-12 73.6 6.4 70 9-90 300-369 (385)
34 1lr5_A Auxin binding protein 1 97.9 5.1E-05 1.8E-09 50.9 7.2 70 8-80 86-158 (163)
35 2ozi_A Hypothetical protein RP 97.8 3.5E-05 1.2E-09 49.1 5.3 38 7-47 55-93 (98)
36 3h8u_A Uncharacterized conserv 97.8 4.4E-05 1.5E-09 48.6 5.7 42 8-52 77-118 (125)
37 2gu9_A Tetracenomycin polyketi 97.7 0.00012 4.2E-09 44.9 6.8 41 9-52 61-101 (113)
38 1v70_A Probable antibiotics sy 97.6 0.00017 5.7E-09 43.4 6.2 39 9-50 66-104 (105)
39 1x82_A Glucose-6-phosphate iso 97.5 0.00027 9.4E-09 49.3 6.7 41 9-52 118-158 (190)
40 3lag_A Uncharacterized protein 97.5 0.00015 5.1E-09 45.8 4.8 36 8-46 57-92 (98)
41 2fqp_A Hypothetical protein BP 97.4 0.00032 1.1E-08 43.3 5.4 35 10-47 59-93 (97)
42 3l2h_A Putative sugar phosphat 97.4 0.00039 1.3E-08 46.4 6.0 40 9-51 85-125 (162)
43 2oa2_A BH2720 protein; 1017534 97.4 0.0006 2.1E-08 45.1 6.7 38 12-52 90-127 (148)
44 3ibm_A Cupin 2, conserved barr 97.4 0.00046 1.6E-08 47.2 6.2 41 9-52 93-134 (167)
45 3cew_A Uncharacterized cupin p 97.2 0.001 3.6E-08 42.3 6.6 42 9-53 65-106 (125)
46 3ht1_A REMF protein; cupin fol 97.2 0.00062 2.1E-08 43.8 5.4 39 10-51 79-117 (145)
47 2opk_A Hypothetical protein; p 97.1 0.00085 2.9E-08 42.8 5.3 35 12-48 75-109 (112)
48 1o4t_A Putative oxalate decarb 97.1 0.0011 3.7E-08 43.2 5.8 36 9-47 95-130 (133)
49 2b8m_A Hypothetical protein MJ 97.1 0.0011 3.7E-08 41.7 5.4 37 10-49 65-102 (117)
50 3kgz_A Cupin 2 conserved barre 97.1 0.0014 4.9E-08 44.5 6.3 41 9-52 81-121 (156)
51 1rc6_A Hypothetical protein YL 97.0 0.0014 4.7E-08 47.2 6.1 42 9-52 217-258 (261)
52 3jzv_A Uncharacterized protein 97.0 0.0015 5E-08 45.0 5.9 40 9-51 90-129 (166)
53 1vj2_A Novel manganese-contain 97.0 0.0013 4.6E-08 42.2 5.3 39 9-50 85-123 (126)
54 4i4a_A Similar to unknown prot 97.0 0.0018 6.2E-08 41.0 5.9 36 9-47 71-106 (128)
55 3i7d_A Sugar phosphate isomera 97.0 0.0014 4.7E-08 44.5 5.5 41 9-52 82-124 (163)
56 2f4p_A Hypothetical protein TM 96.9 0.0018 6.1E-08 43.0 5.6 37 11-50 88-124 (147)
57 2bnm_A Epoxidase; oxidoreducta 96.9 0.0023 7.7E-08 43.6 6.1 35 10-47 162-197 (198)
58 3nw4_A Gentisate 1,2-dioxygena 96.9 0.0018 6E-08 50.4 6.0 39 9-50 141-179 (368)
59 3fjs_A Uncharacterized protein 96.9 0.0019 6.6E-08 41.1 5.2 35 10-47 74-108 (114)
60 3h7j_A Bacilysin biosynthesis 96.8 0.0031 1.1E-07 45.0 6.3 40 9-51 183-222 (243)
61 3lwc_A Uncharacterized protein 96.8 0.0025 8.6E-08 41.4 5.2 38 9-50 76-113 (119)
62 3es1_A Cupin 2, conserved barr 96.8 0.0017 5.7E-08 45.6 4.6 40 9-52 117-156 (172)
63 4e2g_A Cupin 2 conserved barre 96.8 0.0035 1.2E-07 39.5 5.7 37 10-50 79-115 (126)
64 2o8q_A Hypothetical protein; c 96.7 0.0024 8.2E-08 40.9 4.9 37 10-50 83-119 (134)
65 1sef_A Conserved hypothetical 96.7 0.0038 1.3E-07 45.4 6.2 39 9-49 220-258 (274)
66 1sfn_A Conserved hypothetical 96.7 0.0043 1.5E-07 44.6 6.3 42 8-52 202-243 (246)
67 2d40_A Z3393, putative gentisa 96.6 0.0028 9.4E-08 48.3 5.4 38 10-50 139-176 (354)
68 1y9q_A Transcriptional regulat 96.6 0.0037 1.3E-07 42.5 5.5 38 9-50 143-180 (192)
69 2xlg_A SLL1785 protein, CUCA; 96.6 0.004 1.4E-07 45.4 5.8 34 11-47 103-137 (239)
70 1sq4_A GLXB, glyoxylate-induce 96.6 0.0035 1.2E-07 46.1 5.5 43 8-53 228-270 (278)
71 3bu7_A Gentisate 1,2-dioxygena 96.6 0.0041 1.4E-07 48.7 6.0 38 9-49 161-199 (394)
72 1yhf_A Hypothetical protein SP 96.6 0.0051 1.7E-07 38.1 5.4 27 9-35 77-103 (115)
73 1juh_A Quercetin 2,3-dioxygena 96.5 0.0058 2E-07 46.2 6.1 39 8-50 92-130 (350)
74 1vr3_A Acireductone dioxygenas 96.4 0.0073 2.5E-07 43.2 6.1 38 11-51 128-165 (191)
75 1y3t_A Hypothetical protein YX 96.4 0.0081 2.8E-07 43.7 6.2 37 10-50 257-293 (337)
76 2q30_A Uncharacterized protein 96.3 0.0072 2.5E-07 36.8 5.0 27 9-35 73-99 (110)
77 4axo_A EUTQ, ethanolamine util 96.3 0.0091 3.1E-07 41.1 5.9 40 9-53 101-140 (151)
78 2pfw_A Cupin 2, conserved barr 96.3 0.014 4.7E-07 36.1 6.1 37 9-50 71-107 (116)
79 1zrr_A E-2/E-2' protein; nicke 96.2 0.0039 1.3E-07 43.9 3.6 37 11-50 123-159 (179)
80 3d82_A Cupin 2, conserved barr 95.9 0.0058 2E-07 36.7 3.1 25 10-34 68-92 (102)
81 2ozj_A Cupin 2, conserved barr 95.9 0.0087 3E-07 37.2 3.7 34 9-47 75-108 (114)
82 1sq4_A GLXB, glyoxylate-induce 95.8 0.014 4.8E-07 42.8 5.3 37 10-49 108-144 (278)
83 3bu7_A Gentisate 1,2-dioxygena 95.8 0.017 5.8E-07 45.1 6.0 40 9-50 331-370 (394)
84 2vpv_A Protein MIF2, MIF2P; nu 95.8 0.026 8.7E-07 39.4 6.2 35 9-46 127-161 (166)
85 1y3t_A Hypothetical protein YX 95.8 0.022 7.5E-07 41.4 6.1 38 9-50 84-121 (337)
86 2pyt_A Ethanolamine utilizatio 95.8 0.021 7.2E-07 37.8 5.5 37 9-50 92-128 (133)
87 1o5u_A Novel thermotoga mariti 95.7 0.01 3.5E-07 37.6 3.6 27 9-35 67-93 (101)
88 4e2q_A Ureidoglycine aminohydr 95.7 0.027 9.3E-07 41.9 6.3 40 8-50 223-262 (266)
89 2i45_A Hypothetical protein; n 95.6 0.011 3.6E-07 36.5 3.5 24 10-33 67-90 (107)
90 1rc6_A Hypothetical protein YL 95.6 0.019 6.5E-07 41.2 5.2 38 9-49 98-135 (261)
91 4h7l_A Uncharacterized protein 95.5 0.034 1.2E-06 38.6 6.1 37 9-52 85-121 (157)
92 2d40_A Z3393, putative gentisa 95.5 0.018 6.1E-07 43.8 5.0 36 9-49 305-340 (354)
93 3rns_A Cupin 2 conserved barre 95.4 0.023 7.7E-07 40.1 4.9 27 9-35 190-217 (227)
94 2arc_A ARAC, arabinose operon 95.3 0.049 1.7E-06 35.0 6.0 37 8-46 54-90 (164)
95 1sef_A Conserved hypothetical 95.1 0.031 1.1E-06 40.5 5.0 38 9-49 101-138 (274)
96 3bcw_A Uncharacterized protein 95.0 0.029 1E-06 36.8 4.3 31 5-35 82-112 (123)
97 1juh_A Quercetin 2,3-dioxygena 94.7 0.058 2E-06 40.7 5.6 37 8-48 289-325 (350)
98 3h7j_A Bacilysin biosynthesis 93.6 0.16 5.5E-06 36.0 5.9 39 9-50 71-110 (243)
99 3st7_A Capsular polysaccharide 93.4 0.15 5.1E-06 37.2 5.5 41 7-50 312-356 (369)
100 3rns_A Cupin 2 conserved barre 92.8 0.17 5.8E-06 35.5 4.9 32 10-46 75-106 (227)
101 1yfu_A 3-hydroxyanthranilate-3 92.4 0.21 7.2E-06 35.4 4.9 28 7-34 74-101 (174)
102 4gjz_A Lysine-specific demethy 92.0 0.13 4.4E-06 35.1 3.4 25 11-35 202-226 (235)
103 2y0o_A Probable D-lyxose ketol 91.9 0.24 8.3E-06 34.8 4.7 38 10-52 119-156 (175)
104 3nw4_A Gentisate 1,2-dioxygena 91.7 0.34 1.2E-05 37.6 5.7 34 10-48 317-350 (368)
105 1sfn_A Conserved hypothetical 91.1 0.23 7.8E-06 35.4 4.0 34 9-47 85-118 (246)
106 1zvf_A 3-hydroxyanthranilate 3 88.7 0.87 3E-05 32.3 5.3 27 9-35 79-105 (176)
107 4b29_A Dimethylsulfoniopropion 88.4 0.81 2.8E-05 33.3 5.1 37 7-47 168-204 (217)
108 4e2q_A Ureidoglycine aminohydr 87.8 0.49 1.7E-05 35.0 3.7 34 9-47 108-141 (266)
109 3es4_A Uncharacterized protein 87.4 1.2 4.1E-05 29.2 5.1 37 6-47 76-112 (116)
110 3k2o_A Bifunctional arginine d 86.8 1 3.5E-05 34.2 5.0 26 11-36 257-282 (336)
111 1zx5_A Mannosephosphate isomer 86.0 0.44 1.5E-05 35.5 2.6 23 9-31 157-179 (300)
112 1qwr_A Mannose-6-phosphate iso 85.1 0.51 1.8E-05 35.4 2.6 23 10-32 158-180 (319)
113 1vrb_A Putative asparaginyl hy 84.6 1.5 5.1E-05 33.0 5.0 26 10-35 218-243 (342)
114 4diq_A Lysine-specific demethy 83.8 1.4 4.9E-05 35.4 4.8 32 10-43 228-259 (489)
115 3al5_A HTYW5, JMJC domain-cont 83.7 1.1 3.7E-05 33.5 3.9 26 10-35 240-265 (338)
116 2qnk_A 3-hydroxyanthranilate 3 82.4 0.62 2.1E-05 35.3 2.1 32 4-35 67-98 (286)
117 3eqe_A Putative cystein deoxyg 82.4 4.6 0.00016 27.8 6.4 40 10-52 117-156 (171)
118 3ebr_A Uncharacterized RMLC-li 82.0 2.2 7.4E-05 28.9 4.6 31 12-45 80-112 (159)
119 3kv4_A PHD finger protein 8; e 81.8 1.1 3.6E-05 35.6 3.3 27 10-36 301-327 (447)
120 2q1z_B Anti-sigma factor CHRR, 80.2 1.6 5.5E-05 30.2 3.5 35 11-48 160-194 (195)
121 2wfp_A Mannose-6-phosphate iso 80.0 1.1 3.6E-05 34.7 2.7 23 9-31 239-261 (394)
122 3myx_A Uncharacterized protein 79.6 1.2 4E-05 32.5 2.7 28 6-33 201-228 (238)
123 2xdv_A MYC-induced nuclear ant 79.4 1.7 5.7E-05 34.2 3.7 25 10-34 199-223 (442)
124 2yu1_A JMJC domain-containing 78.2 4.5 0.00015 32.1 5.8 28 9-36 265-292 (451)
125 3k3o_A PHF8, PHD finger protei 78.0 1.1 3.7E-05 34.9 2.2 27 10-36 217-243 (371)
126 3d8c_A Hypoxia-inducible facto 78.0 2.1 7E-05 32.2 3.7 26 10-35 261-286 (349)
127 3pua_A GRC5, PHD finger protei 77.9 1.2 4E-05 35.0 2.4 27 10-36 244-270 (392)
128 3kv5_D JMJC domain-containing 77.8 1.2 3.9E-05 35.6 2.4 26 10-35 336-361 (488)
129 3kv9_A JMJC domain-containing 77.8 1.1 3.7E-05 35.1 2.2 26 10-35 245-270 (397)
130 3gbg_A TCP pilus virulence reg 77.5 4 0.00014 28.4 4.9 23 11-33 50-72 (276)
131 2xxz_A Lysine-specific demethy 77.4 1.8 6.3E-05 33.2 3.3 22 15-36 284-305 (332)
132 2jso_A Polymyxin resistance pr 75.8 2.6 8.9E-05 26.7 3.1 36 9-50 35-70 (88)
133 3pur_A Lysine-specific demethy 74.8 1.4 4.9E-05 35.8 2.2 27 10-36 366-392 (528)
134 2o1q_A Putative acetyl/propion 72.8 2.5 8.4E-05 27.8 2.6 22 12-33 86-108 (145)
135 3cjx_A Protein of unknown func 72.7 5.7 0.0002 27.0 4.6 24 11-34 81-104 (165)
136 3d0j_A Uncharacterized protein 71.1 7.7 0.00026 26.4 4.8 37 10-52 76-112 (140)
137 3avr_A Lysine-specific demethy 70.6 3.2 0.00011 33.7 3.3 22 15-36 343-364 (531)
138 1yud_A Hypothetical protein SO 68.3 13 0.00043 25.9 5.6 34 14-50 101-136 (170)
139 3myx_A Uncharacterized protein 67.3 9.3 0.00032 27.7 4.9 28 8-35 81-108 (238)
140 2gm6_A Cysteine dioxygenase ty 64.9 4.6 0.00016 28.4 2.8 66 10-79 128-196 (208)
141 2rqx_A PMRD, polymyxin B resis 64.5 5 0.00017 25.4 2.6 32 11-45 36-67 (89)
142 1pmi_A PMI, phosphomannose iso 64.2 4.2 0.00014 31.9 2.7 22 10-31 266-287 (440)
143 4ask_A Lysine-specific demethy 63.6 5.4 0.00019 32.4 3.3 22 15-36 318-339 (510)
144 1e5r_A Proline oxidase; oxidor 58.5 14 0.00048 27.6 4.6 51 9-63 139-191 (290)
145 3eln_A Cysteine dioxygenase ty 52.7 49 0.0017 22.9 6.4 40 10-51 121-161 (200)
146 3uss_A Putative uncharacterize 47.6 22 0.00074 25.2 3.9 37 11-49 123-161 (211)
147 2vec_A YHAK, pirin-like protei 45.0 33 0.0011 24.9 4.7 38 10-49 104-143 (256)
148 2ypd_A Probable JMJC domain-co 44.9 20 0.0007 28.1 3.7 23 13-35 296-318 (392)
149 3rcq_A Aspartyl/asparaginyl be 44.3 48 0.0016 23.3 5.3 39 9-51 145-183 (197)
150 1eyb_A Homogentisate 1,2-dioxy 43.7 13 0.00045 29.9 2.5 23 12-34 198-220 (471)
151 2hc8_A PACS, cation-transporti 42.8 9.9 0.00034 24.1 1.4 17 11-27 27-43 (113)
152 3mcb_A Nascent polypeptide-ass 42.6 39 0.0013 19.2 3.8 27 5-31 19-45 (54)
153 2kb3_A Oxoglutarate dehydrogen 40.1 22 0.00074 23.4 2.8 21 2-22 110-130 (143)
154 2qnk_A 3-hydroxyanthranilate 3 40.0 68 0.0023 24.1 5.8 25 9-33 243-267 (286)
155 1gxc_A CHK2, CDS1, serine/thre 39.6 21 0.0007 23.4 2.6 23 11-33 117-140 (149)
156 2kij_A Copper-transporting ATP 39.3 11 0.00039 24.1 1.3 16 12-27 40-55 (124)
157 3o14_A Anti-ecfsigma factor, C 38.2 33 0.0011 24.1 3.7 33 12-48 79-111 (223)
158 3anw_A GINS51, putative unchar 37.2 14 0.00046 25.7 1.5 19 8-26 152-171 (188)
159 1wid_A DNA-binding protein RAV 37.0 16 0.00056 23.6 1.8 25 11-44 89-113 (130)
160 3oru_A DUF1989 family protein; 36.7 42 0.0014 24.4 4.1 32 4-35 39-75 (234)
161 4h87_A Kanadaptin; FHA domain 35.9 32 0.0011 22.1 3.1 21 11-31 108-128 (130)
162 1qu5_A Protein kinase SPK1; FH 35.7 9.9 0.00034 26.2 0.5 17 11-27 121-140 (182)
163 3po8_A RV0020C protein, putati 35.5 22 0.00074 21.5 2.1 23 2-24 67-89 (100)
164 1lgp_A Cell cycle checkpoint p 35.4 33 0.0011 21.1 3.0 32 2-33 70-110 (116)
165 1dmz_A Protein (protein kinase 35.3 8 0.00027 25.9 0.0 12 11-22 97-108 (158)
166 3va4_A Mediator of DNA damage 34.0 21 0.00071 23.2 1.9 21 2-22 91-116 (132)
167 3hx1_A SLR1951 protein; P74513 33.7 28 0.00097 22.3 2.5 23 2-24 84-106 (131)
168 1uht_A Expressed protein; FHA 32.7 22 0.00076 22.1 1.8 23 2-24 78-103 (118)
169 2kfu_A RV1827 PThr 22; FHA dom 32.4 23 0.00078 24.0 2.0 23 2-24 119-141 (162)
170 1zx5_A Mannosephosphate isomer 31.9 38 0.0013 24.9 3.3 23 10-32 265-287 (300)
171 2e63_A KIAA1787 protein; struc 31.5 54 0.0018 22.3 3.8 24 12-35 116-142 (170)
172 2xt9_B Putative signal transdu 31.1 26 0.00088 21.8 1.9 23 2-24 75-97 (115)
173 1tq5_A Protein YHHW; bicupin, 31.1 58 0.002 23.2 4.1 37 10-48 81-119 (242)
174 1wln_A Afadin; beta sandwich, 29.7 53 0.0018 20.5 3.3 32 2-34 82-114 (120)
175 2csw_A Ubiquitin ligase protei 28.5 25 0.00086 22.9 1.6 23 2-24 85-110 (145)
176 4ejq_A Kinesin-like protein KI 28.3 42 0.0014 22.2 2.7 23 11-34 122-144 (154)
177 2fhd_A RAD9 homolog, DNA repai 27.9 29 0.00099 24.0 1.9 17 7-23 57-73 (153)
178 2jqj_A DNA damage response pro 27.6 38 0.0013 22.1 2.4 14 11-24 100-113 (151)
179 3mce_A Nascent polypeptide-ass 26.9 67 0.0023 18.7 3.1 26 6-31 26-51 (61)
180 1qwr_A Mannose-6-phosphate iso 26.7 47 0.0016 24.5 3.0 24 9-32 286-309 (319)
181 1pmi_A PMI, phosphomannose iso 26.5 1E+02 0.0036 23.9 5.1 22 12-33 402-423 (440)
182 1xn7_A Hypothetical protein YH 26.4 24 0.00081 21.1 1.1 17 74-90 18-34 (78)
183 1r21_A Antigen KI-67; beta san 25.8 33 0.0011 21.6 1.7 13 11-23 87-99 (128)
184 3di4_A Uncharacterized protein 25.2 83 0.0028 23.5 4.1 33 4-36 53-90 (286)
185 2o8x_A Probable RNA polymerase 25.2 24 0.00081 19.1 0.9 22 69-90 28-49 (70)
186 1kcq_A Gelsolin, brevin, ADF, 24.5 56 0.0019 19.9 2.6 24 11-34 23-46 (104)
187 1o9y_A HRCQ2; secretory protei 24.4 61 0.0021 19.3 2.7 23 11-33 33-57 (84)
188 2jmz_A Hypothetical protein MJ 24.2 28 0.00094 23.5 1.2 18 9-26 116-133 (186)
189 3hvz_A Uncharacterized protein 22.7 52 0.0018 19.6 2.1 16 13-28 11-26 (78)
190 1tc3_C Protein (TC3 transposas 22.4 45 0.0015 16.1 1.6 20 70-89 19-38 (51)
191 1zuy_A Myosin-5 isoform; SH3 d 21.9 43 0.0015 17.6 1.5 14 10-23 16-29 (58)
192 1g6g_A Protein kinase RAD53; b 21.6 62 0.0021 20.3 2.5 16 11-26 93-108 (127)
193 3gqs_A Adenylate cyclase-like 21.6 25 0.00086 21.4 0.5 22 2-23 71-93 (106)
194 4dik_A Flavoprotein; TM0755, e 21.4 50 0.0017 25.2 2.3 26 19-51 43-70 (410)
195 2wfp_A Mannose-6-phosphate iso 21.3 49 0.0017 25.3 2.2 23 10-32 360-382 (394)
196 2cqa_A RUVB-like 2; TIP48, TIP 21.0 34 0.0012 21.7 1.0 13 13-25 62-74 (95)
197 1gcq_C VAV proto-oncogene; SH3 20.9 40 0.0014 18.6 1.3 15 11-25 26-40 (70)
198 3rnj_A Brain-specific angiogen 20.8 41 0.0014 18.5 1.3 13 12-24 25-37 (67)
199 4gof_A Small glutamine-rich te 20.7 40 0.0014 19.1 1.2 13 76-88 35-47 (52)
200 2pie_A E3 ubiquitin-protein li 20.7 30 0.001 22.3 0.8 14 11-24 89-102 (138)
201 1fse_A GERE; helix-turn-helix 20.7 33 0.0011 18.7 0.9 22 69-90 23-44 (74)
202 3fm8_A Kinesin-like protein KI 20.7 83 0.0029 20.2 3.0 21 12-33 103-123 (124)
203 1eik_A RNA polymerase subunit 20.7 35 0.0012 20.9 1.0 13 11-23 48-60 (77)
204 1k1z_A VAV; SH3, proto-oncogen 20.6 41 0.0014 19.1 1.3 15 10-24 33-47 (78)
205 3nnf_A CURA; non-HAEM Fe(II)/a 20.5 1.6E+02 0.0055 22.7 4.9 47 6-52 230-276 (344)
206 2jpc_A SSRB; DNA binding prote 20.5 24 0.00083 18.7 0.2 22 69-90 10-31 (61)
207 1gmu_A UREE; metallochaperone; 20.1 79 0.0027 20.8 2.8 31 12-45 48-78 (143)
208 4ayb_H DNA-directed RNA polyme 20.0 41 0.0014 20.7 1.2 13 11-23 54-66 (84)
No 1
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.92 E-value=2.3e-25 Score=180.59 Aligned_cols=82 Identities=18% Similarity=0.269 Sum_probs=72.3
Q ss_pred CCCceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCC---CC--CCceeecCCCcc--------------
Q 038528 6 EDDIRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTED---DS--YFEPVIGAYTSI-------------- 66 (91)
Q Consensus 6 ~~~~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~---~~--~~~~flag~~~~-------------- 66 (91)
+.+||+++||+|||++||||+++|+||+|+. +|++++++||+|. +| ++.|||||+..+
T Consensus 168 d~hqkv~~vr~GDviaiPaG~~~w~yN~G~~---~l~iv~~~Dt~n~~NQld~~~r~F~LAGn~~~~~~~~~~~~~~~~~ 244 (531)
T 3fz3_A 168 DRHQKTRRIREGDVVAIPAGVAYWSYNDGDQ---ELVAVNLFHVSSDHNQLDQNPRKFYLAGNPENEFNQQGQSQPRQQG 244 (531)
T ss_dssp CEESCCEEEETTEEEEECTTCCEEEECCSSS---CEEEEEEEETTCTTCCSCSSCCEEESSSCCCCTTCC----------
T ss_pred ccceeeecccCCcEEEECCCCeEEEEeCCCc---eEEEEEEEccccccccCCCccceeEEcCCCcccccccccccccccc
Confidence 3479999999999999999999999999986 8999999999885 44 377899998422
Q ss_pred ------------------------CceecccCHHHHHHHhCCCccccc
Q 038528 67 ------------------------SDLILGFDRKVLQSAFKRAVLLLG 90 (91)
Q Consensus 67 ------------------------~ni~~GF~~~iL~~Af~v~~~~i~ 90 (91)
+|||+|||+++|++||||+.++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~nifsGFs~e~La~A~~v~~~~a~ 292 (531)
T 3fz3_A 245 EQGRPGQHQQPFGRPRQQEQQGNGNNVFSGFNTQLLAQALNVNEETAR 292 (531)
T ss_dssp ----------------------CCSSGGGGSCHHHHHHHHTSCHHHHH
T ss_pred cccccccccccccccchhhhcccCCCeeecCCHHHHHHHHCCCHHHHH
Confidence 489999999999999999999875
No 2
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.91 E-value=1.1e-24 Score=174.31 Aligned_cols=80 Identities=21% Similarity=0.279 Sum_probs=71.6
Q ss_pred CceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCCC---C--CCceeecCCCc-------------cCce
Q 038528 8 DIRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDD---S--YFEPVIGAYTS-------------ISDL 69 (91)
Q Consensus 8 ~~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~~---~--~~~~flag~~~-------------~~ni 69 (91)
+||+++|++||||+||||++||+||+|+. +|++++++|++|.+ | .+.|||||+.+ ++||
T Consensus 143 hqkv~~l~~GDvi~iPaG~~~~~~N~g~e---~L~~l~~~d~~n~~nQld~~~~~F~LaG~~~~~~~~~~~~~~~~~~ni 219 (466)
T 3kgl_A 143 HQKVEHIRTGDTIATHPGVAQWFYNDGNQ---PLVIVSVLDLASHQNQLDRNPRPFYLAGNNPQGQVWIEGREQQPQKNI 219 (466)
T ss_dssp ESCEEEEETTEEEEECTTCEEEEECCSSS---CEEEEEEEESSSTTCCSCSSCCEEESSCCBTTCCTTSTTCTTCCBCCG
T ss_pred ceeeccccCCCEEEECCCCcEEEEeCCCC---cEEEEEEEcCCCcccccCCceeeeEecCCCccccccccccccccCCCc
Confidence 68999999999999999999999999964 99999999999874 3 26679999875 4699
Q ss_pred ecccCHHHHHHHhCCCccccc
Q 038528 70 ILGFDRKVLQSAFKRAVLLLG 90 (91)
Q Consensus 70 ~~GF~~~iL~~Af~v~~~~i~ 90 (91)
|+|||+++|++||||++++++
T Consensus 220 ~sGF~~e~La~Af~v~~e~~~ 240 (466)
T 3kgl_A 220 LNGFTPEVLAKAFKIDVRTAQ 240 (466)
T ss_dssp GGGSCHHHHHHHHTSCHHHHH
T ss_pred cccCCHHHHHHHhCCCHHHHH
Confidence 999999999999999999875
No 3
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.90 E-value=4.1e-24 Score=170.98 Aligned_cols=81 Identities=14% Similarity=0.277 Sum_probs=72.3
Q ss_pred CCceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCCC---C---CCceeecCCCcc--------------
Q 038528 7 DDIRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDD---S---YFEPVIGAYTSI-------------- 66 (91)
Q Consensus 7 ~~~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~~---~---~~~~flag~~~~-------------- 66 (91)
.+||+++|++|||++||||++||+||+|+. +|++++++|++|.+ | .+.|||||+.++
T Consensus 127 ~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~---~lv~v~~~d~~n~~nqld~~~~r~F~LaG~~~~~~~~~~~~~~~~~~ 203 (465)
T 3qac_A 127 QHQKIRHLREGDIFAMPAGVSHWAYNNGDQ---PLVAVILIDTANHANQLDKNFPTRFYLAGKPQQEHSGEHQFSRESRR 203 (465)
T ss_dssp CCCCEEEEETTEEEEECTTCEEEEECCSSS---CEEEEEEECTTSTTCCSCSSSCCEEESSSCCCCSCC-----------
T ss_pred cccceeeecCCCEEEECCCCeEEEEcCCCC---CEEEEEEEcCCCcccccccccceeEEecCCCcccccccccccccccc
Confidence 468899999999999999999999999975 99999999999864 4 266799998655
Q ss_pred -----CceecccCHHHHHHHhCCCccccc
Q 038528 67 -----SDLILGFDRKVLQSAFKRAVLLLG 90 (91)
Q Consensus 67 -----~ni~~GF~~~iL~~Af~v~~~~i~ 90 (91)
+|||+|||+++|++||||+.++++
T Consensus 204 ~~~~~~ni~sgF~~e~La~Af~v~~~~~~ 232 (465)
T 3qac_A 204 GERNTGNIFRGFETRLLAESFGVSEEIAQ 232 (465)
T ss_dssp ---CCCCGGGGSCHHHHHHHHTCCHHHHH
T ss_pred ccccccchhhcCCHHHHHHHhCCCHHHHH
Confidence 699999999999999999999875
No 4
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.89 E-value=2.2e-23 Score=167.88 Aligned_cols=80 Identities=15% Similarity=0.269 Sum_probs=71.2
Q ss_pred CceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCC---CC--CCceeecCCCcc----------------
Q 038528 8 DIRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTED---DS--YFEPVIGAYTSI---------------- 66 (91)
Q Consensus 8 ~~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~---~~--~~~~flag~~~~---------------- 66 (91)
++|+++|++||||+||||++||+||+|+. +|++++++|++|. +| .+.|||||+..+
T Consensus 108 ~qk~~~l~~GDV~viPaG~~h~~~N~G~~---~lv~v~~~d~~n~~NQld~~~r~F~LaG~~~~~~~~~~~~~~~~~~~~ 184 (496)
T 3ksc_A 108 HQKVNRFREGDIIAVPTGIVFWMYNDQDT---PVIAVSLTDIRSSNNQLDQMPRRFYLAGNHEQEFLQYQHQQGGKQEQE 184 (496)
T ss_dssp CCCEEEECTTEEEEECTTCEEEEEECSSS---CEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTGGGCC---------
T ss_pred hheeeccCCCCEEEECCCCcEEEEcCCCC---CEEEEEEeccCcccccCCCceeeeEecCCCcccccccccccccccccc
Confidence 57788999999999999999999999975 9999999999985 33 367899999644
Q ss_pred ---CceecccCHHHHHHHhCCCccccc
Q 038528 67 ---SDLILGFDRKVLQSAFKRAVLLLG 90 (91)
Q Consensus 67 ---~ni~~GF~~~iL~~Af~v~~~~i~ 90 (91)
.|||+|||+++|++||||+.++++
T Consensus 185 ~~~~ni~sgF~~e~La~Af~v~~e~~~ 211 (496)
T 3ksc_A 185 NEGNNIFSGFKRDFLEDAFNVNRHIVD 211 (496)
T ss_dssp --CCSGGGGSCHHHHHHHHTCCHHHHH
T ss_pred ccCCCchhhcCHHHHHHHHCCCHHHHH
Confidence 699999999999999999999875
No 5
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.88 E-value=5.7e-23 Score=162.22 Aligned_cols=88 Identities=20% Similarity=0.365 Sum_probs=80.7
Q ss_pred CccccCCCceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCCCCCCc-eeecCCCccCceecccCHHHHH
Q 038528 1 MSWADEDDIRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDDSYFE-PVIGAYTSISDLILGFDRKVLQ 79 (91)
Q Consensus 1 l~~v~~~~~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~~~~~~-~flag~~~~~ni~~GF~~~iL~ 79 (91)
+++|.++++++++|++|||+++|+|++||++|.|+++ +|+++++++++|+|+.+. ||++|+.++.++|+||++++|+
T Consensus 77 ~g~V~~~~~~~~~l~~GDv~~~P~G~~h~~~N~g~~~--~l~i~~l~~~s~~pg~~~~f~laG~~~~~s~~~gf~~evLa 154 (418)
T 3s7i_A 77 VTVANGNNRKSFNLDEGHALRIPSGFISYILNRHDNQ--NLRVAKISMPVNTPGQFEDFFPASSRDQSSYLQGFSRNTLE 154 (418)
T ss_dssp EEEECSSCEEEEEEETTEEEEECTTCEEEEEECCSSC--CEEEEEEEEESSBTTBCCEECSSCCSSCCCGGGGSCHHHHH
T ss_pred EEEEecCCEEEEEecCCCEEEECCCCeEEEEecCCCc--cEEEEEeecCcCCCCccceeeccCCcchhHHhhcCCHHHHH
Confidence 4789999999999999999999999999999998764 999999999999887755 5899999999999999999999
Q ss_pred HHhCCCccccc
Q 038528 80 SAFKRAVLLLG 90 (91)
Q Consensus 80 ~Af~v~~~~i~ 90 (91)
+||+++.++++
T Consensus 155 ~af~v~~~~v~ 165 (418)
T 3s7i_A 155 AAFNAEFNEIR 165 (418)
T ss_dssp HHHTSCHHHHH
T ss_pred HHHCcCHHHHH
Confidence 99999998875
No 6
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.86 E-value=4.5e-22 Score=159.70 Aligned_cols=79 Identities=11% Similarity=0.214 Sum_probs=69.8
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCCC---CC--CceeecCCCc------------------
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDD---SY--FEPVIGAYTS------------------ 65 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~~---~~--~~~flag~~~------------------ 65 (91)
+++++|++|||++||||++||++|+++. +|++++++|++|.. |+ +.|||||+..
T Consensus 112 qkv~~l~~GDvi~iPaG~~h~~~N~g~~---~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~~~~ 188 (493)
T 2d5f_A 112 QKIRHFNEGDVLVIPPGVPYWTYNTGDE---PVVAISLLDTSNFNNQLDQNPRVFYLAGNPDIEHPETMQQQQQQKSHGG 188 (493)
T ss_dssp SCEEEEETTEEEEECTTCCEEEEECSSS---CEEEEEEECTTCTTCCSCSSCCCEESSSCCCCSCGGGTC----------
T ss_pred ceEEEecCCCEEEECCCCcEEEEeCCCC---CEEEEEEecCcCcccccccccceeeccCCccccchhhhhhccccccccc
Confidence 5799999999999999999999999974 99999999988763 33 7789998643
Q ss_pred ------------cCceecccCHHHHHHHhCCCccccc
Q 038528 66 ------------ISDLILGFDRKVLQSAFKRAVLLLG 90 (91)
Q Consensus 66 ------------~~ni~~GF~~~iL~~Af~v~~~~i~ 90 (91)
+.|||+||++++|++||||+.++++
T Consensus 189 ~~~~~~~~~~~~~~nif~gf~~e~La~aF~v~~~~v~ 225 (493)
T 2d5f_A 189 RKQGQHQQQEEEGGSVLSGFSKHFLAQSFNTNEDTAE 225 (493)
T ss_dssp -----------CCCCGGGGSCHHHHHHHTTCCHHHHH
T ss_pred ccccccccccccccchhhcCCHHHHHhHhCCCHHHHH
Confidence 3599999999999999999999875
No 7
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.86 E-value=5e-22 Score=160.35 Aligned_cols=79 Identities=13% Similarity=0.266 Sum_probs=68.0
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCCC---CC--CceeecCCCc------------------
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDD---SY--FEPVIGAYTS------------------ 65 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~~---~~--~~~flag~~~------------------ 65 (91)
+|+++|++||||+||||++||+||+|+. +|++++++|++|.. |+ +.|||||+..
T Consensus 125 qkv~~v~~GDvi~iPaG~~hw~~N~g~~---~l~~v~~~d~~n~~nqld~~~r~F~LaG~~~~~~~~~~~~~~~~~~~~~ 201 (510)
T 3c3v_A 125 QKVHRFNEGDLIAVPTGVAFWLYNDHDT---DVVAVSLTDTNNNDNQLDQFPRRFNLAGNHEQEFLRYQQQSRQSRRRSL 201 (510)
T ss_dssp SCCEEECTTEEEEECTTCEEEEEECSSS---CEEEEEEECTTBTTCCSCSCCCCEESSCCCCCTTGGGCC----------
T ss_pred ceEEEecCCCEEEECCCCCEEEEeCCCC---CEEEEEEeCCCCcccccccccceeEecCCcccccchhhhcccccccccc
Confidence 4689999999999999999999999975 99999999999863 43 6789998532
Q ss_pred -------------------------------------cCceecccCHHHHHHHhCCC-ccccc
Q 038528 66 -------------------------------------ISDLILGFDRKVLQSAFKRA-VLLLG 90 (91)
Q Consensus 66 -------------------------------------~~ni~~GF~~~iL~~Af~v~-~~~i~ 90 (91)
++|+|+|||+++|++||||+ .++++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~sgF~~~~La~af~v~~~~~~~ 264 (510)
T 3c3v_A 202 PYSPYSPQSQPRQEEREFSPRGQHSRRERAGQEEEHEGGNIFSGFTPEFLAQAFQVDDRQIVQ 264 (510)
T ss_dssp --------------------------------------CCTGGGSCHHHHHHHHTCCCHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccceecCCHHHHHHHhCCCHHHHHH
Confidence 34899999999999999999 77764
No 8
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.85 E-value=1.5e-21 Score=156.03 Aligned_cols=80 Identities=14% Similarity=0.230 Sum_probs=70.2
Q ss_pred CceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCC---CC--CCceeecCCCcc----------------
Q 038528 8 DIRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTED---DS--YFEPVIGAYTSI---------------- 66 (91)
Q Consensus 8 ~~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~---~~--~~~~flag~~~~---------------- 66 (91)
++++++|++||||+||||++||+||+|+. +|++++++|++|. +| .+.|||||+..+
T Consensus 111 ~qk~~~l~~GDvi~iPaG~~h~~~N~G~~---~l~~i~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~~~ 187 (476)
T 1fxz_A 111 HQKIYNFREGDLIAVPTGVAWWMYNNEDT---PVVAVSIIDTNSLENQLDQMPRRFYLAGNQEQEFLKYQQEQGGHQSQK 187 (476)
T ss_dssp CCCEEEECTTEEEEECTTCEEEEEECSSS---CEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTHHHHC---------
T ss_pred cceEEEEeCCCEEEECCCCcEEEEeCCCC---CEEEEEEecCCCcccccCCccceeeccCCccccccccccccccccccc
Confidence 46799999999999999999999999965 9999999998886 33 367899987542
Q ss_pred -----------CceecccCHHHHHHHhCCCccccc
Q 038528 67 -----------SDLILGFDRKVLQSAFKRAVLLLG 90 (91)
Q Consensus 67 -----------~ni~~GF~~~iL~~Af~v~~~~i~ 90 (91)
.|+|+||++++|++||||+.++++
T Consensus 188 ~~~~~~~~~~~~~if~gf~~~vLa~af~v~~~~~~ 222 (476)
T 1fxz_A 188 GKHQQEEENEGGSILSGFTLEFLEHAFSVDKQIAK 222 (476)
T ss_dssp ----------CCCGGGGSCHHHHHHHHTCCHHHHH
T ss_pred cccccccccccchhhhcCCHHHHHhhhCCCHHHHH
Confidence 599999999999999999999875
No 9
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.85 E-value=1.4e-21 Score=155.71 Aligned_cols=79 Identities=14% Similarity=0.209 Sum_probs=69.3
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCCC---C--CCceeecCCCcc-----------------
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDD---S--YFEPVIGAYTSI----------------- 66 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~~---~--~~~~flag~~~~----------------- 66 (91)
+++++|++|||++||||++||++|+|+. +|++++++|+.|.. | .+.|||||+..+
T Consensus 126 q~~~~l~~GDv~~iPaG~~H~~~N~g~~---~l~~l~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~~~~ 202 (459)
T 2e9q_A 126 QKIRPFREGDLLVVPAGVSHWMYNRGQS---DLVLIVFADTRNVANQIDPYLRKFYLAGRPEQVERGVEEWERSSRKGSS 202 (459)
T ss_dssp CCCEEEETTEEEEECTTCCEEEEECSSS---CEEEEEEEESSSTTCCSCSSCCEEESSSCCCCCSSTTCC----------
T ss_pred ceeEEecCCCEEEECCCCCEEEEeCCCC---CEEEEEEecCCCcccccCcccceeeccCCccccchhhhccccccccccc
Confidence 5688999999999999999999999965 89999999999853 3 366799998643
Q ss_pred ----CceecccCHHHHHHHhCCCccccc
Q 038528 67 ----SDLILGFDRKVLQSAFKRAVLLLG 90 (91)
Q Consensus 67 ----~ni~~GF~~~iL~~Af~v~~~~i~ 90 (91)
.|+|+||++++|++||+|+.++++
T Consensus 203 ~~~~~nif~gf~~evLa~aF~v~~~~v~ 230 (459)
T 2e9q_A 203 GEKSGNIFSGFADEFLEEAFQIDGGLVR 230 (459)
T ss_dssp --CCCCTTTTSCHHHHHHHHTCCHHHHH
T ss_pred cccccchhhcCCHHHHHhhcCCCHHHHH
Confidence 499999999999999999998875
No 10
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=99.83 E-value=2e-20 Score=131.37 Aligned_cols=87 Identities=16% Similarity=0.312 Sum_probs=77.6
Q ss_pred ccccCCCceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCCCCCCc-eeecCCCccCceecccCHHHHHH
Q 038528 2 SWADEDDIRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDDSYFE-PVIGAYTSISDLILGFDRKVLQS 80 (91)
Q Consensus 2 ~~v~~~~~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~~~~~~-~flag~~~~~ni~~GF~~~iL~~ 80 (91)
+++.++..+++.|++||++.+|+|++||++|.++++ +|++++++++++.|+.+. ||++|+.++.++|+||++++|++
T Consensus 75 ~v~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~--~l~~l~v~~~~~~~g~~~~~~l~g~~~~~~~~~~~p~~vla~ 152 (178)
T 1dgw_A 75 VLVNPDGRDTYKLDQGDAIKIQAGTPFYLINPDNNQ--NLRILKFAITFRRPGTVEDFFLSSTKRLPSYLSAFSKNFLEA 152 (178)
T ss_dssp EEEETTEEEEEEEETTEEEEECTTCCEEEEECCSSS--CEEEEEEEECCSSTTCCCEEESSCCSSCCCGGGGSCHHHHHH
T ss_pred EEEeCCCcEEEEECCCCEEEECCCCeEEEEeCCCCC--CEEEEEEECCCCCCCceEEeeccCCcCcchhhhhCCHHHHHH
Confidence 455566688999999999999999999999998764 899999999998888654 58999998999999999999999
Q ss_pred HhCCCccccc
Q 038528 81 AFKRAVLLLG 90 (91)
Q Consensus 81 Af~v~~~~i~ 90 (91)
||+++.++++
T Consensus 153 af~v~~~~~~ 162 (178)
T 1dgw_A 153 SYDSPYDEIE 162 (178)
T ss_dssp HHTSCHHHHH
T ss_pred HHCcCHHHHH
Confidence 9999998875
No 11
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.80 E-value=7.7e-20 Score=143.56 Aligned_cols=88 Identities=17% Similarity=0.315 Sum_probs=79.1
Q ss_pred CccccCCCceeeeeccCcE------EEeCCCCeEEEeeCCCCCcccEEEEEEeecCCCCCCCceeecCCCccCceecccC
Q 038528 1 MSWADEDDIRTLDIRRGDV------YRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDDSYFEPVIGAYTSISDLILGFD 74 (91)
Q Consensus 1 l~~v~~~~~~~~~lr~GDv------~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~~~~~~~flag~~~~~ni~~GF~ 74 (91)
+++|.++.+.++.|++||+ +++|+|++||++|+++++ +|+++++++++|.+....|||+|+..++|+|+||+
T Consensus 85 v~~v~~~~~~~~~l~~GDv~~~~~~~~iP~G~~h~~~N~g~~~--~l~~i~~~~~~~~~~~~~f~L~G~~~~~s~~~~~~ 162 (397)
T 2phl_A 85 LVLVKPDDRREYFFLTSDNPIFSDHQKIPAGTIFYLVNPDPKE--DLRIIQLAMPVNNPQIHEFFLSSTEAQQSYLQEFS 162 (397)
T ss_dssp EEEEETTTEEEEEEEESSCTTSCSEEEECTTCEEEEEECCSSC--CEEEEEEEEESSSSSCCEEECCCBTTBCCGGGGSC
T ss_pred EEEEeCCCcEEEEECCCCcccccceEEECCCCcEEEEeCCCCC--CeEEEEeecCCCCccceeeeccCCCchhHHhhcCC
Confidence 4678888889999999999 999999999999998554 99999999999987445678999988899999999
Q ss_pred HHHHHHHhCCCccccc
Q 038528 75 RKVLQSAFKRAVLLLG 90 (91)
Q Consensus 75 ~~iL~~Af~v~~~~i~ 90 (91)
+++|++||+++.++++
T Consensus 163 ~~vLa~af~v~~~~v~ 178 (397)
T 2phl_A 163 KHILEASFNSKFEEIN 178 (397)
T ss_dssp HHHHHHHHTSCHHHHH
T ss_pred HHHHHHHhCCCHHHHH
Confidence 9999999999998875
No 12
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.80 E-value=7.2e-20 Score=145.16 Aligned_cols=87 Identities=16% Similarity=0.312 Sum_probs=77.9
Q ss_pred ccccCCCceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCCCCCCc-eeecCCCccCceecccCHHHHHH
Q 038528 2 SWADEDDIRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDDSYFE-PVIGAYTSISDLILGFDRKVLQS 80 (91)
Q Consensus 2 ~~v~~~~~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~~~~~~-~flag~~~~~ni~~GF~~~iL~~ 80 (91)
+++.++..+++.|++||++++|+|++||++|+++++ +|++++++++++.|++++ ||++|++.++++|+||++++|++
T Consensus 120 ~~v~~~~~~~~~l~~GDv~~~P~G~~H~~~N~g~~~--~l~~l~v~~~~~~pg~~~~F~laG~~~~~~~~~~~~~~vLa~ 197 (445)
T 2cav_A 120 VLVNPDGRDTYKLDQGDAIKIQAGTPFYLINPDNNQ--NLRILKFAITFRRPGTVEDFFLSSTKRLPSYLSAFSKNFLEA 197 (445)
T ss_dssp EEEETTEEEEEEEETTEEEEECTTCCEEEEECCSSC--CEEEEEEEECCSSTTCCCEEESSCCSSCCCGGGGSCHHHHHH
T ss_pred EEEeCCCCEEEEecCCCEEEECCCCcEEEEECCCCC--CEEEEEEeccCCCCCceeeeeccCCCchhhhhhcCCHHHHHH
Confidence 566677678999999999999999999999998443 999999999999888755 58999999999999999999999
Q ss_pred HhCCCccccc
Q 038528 81 AFKRAVLLLG 90 (91)
Q Consensus 81 Af~v~~~~i~ 90 (91)
||+++.++++
T Consensus 198 af~v~~~~v~ 207 (445)
T 2cav_A 198 SYDSPYDEIE 207 (445)
T ss_dssp HHTSCHHHHH
T ss_pred HhCCCHHHHH
Confidence 9999998875
No 13
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.80 E-value=1.3e-19 Score=143.18 Aligned_cols=87 Identities=15% Similarity=0.365 Sum_probs=77.7
Q ss_pred ccccCCCceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCCCCCCc-eeecCCCccCceecccCHHHHHH
Q 038528 2 SWADEDDIRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDDSYFE-PVIGAYTSISDLILGFDRKVLQS 80 (91)
Q Consensus 2 ~~v~~~~~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~~~~~~-~flag~~~~~ni~~GF~~~iL~~ 80 (91)
++|.++...++.|++|||+++|+|++||++|+++++ +|++++++++++.|++++ ||++|+..++++|+||++++|++
T Consensus 95 ~~v~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~~e--~l~~l~~~~~s~~pg~~~~f~l~g~~~~~~~~~~~~~~vLa~ 172 (434)
T 2ea7_A 95 TLVNPDSRDSYILEQGHAQKIPAGTTFFLVNPDDNE--NLRIIKLAIPVNNPHRFQDFFLSSTEAQQSYLRGFSKNILEA 172 (434)
T ss_dssp EEECSSCEEEEEEETTEEEEECTTCEEEEEECCSSC--CEEEEEEEEESSBTTBCCEEECSCCSSCCCGGGGSCHHHHHH
T ss_pred EEEeCCCCEEEEeCCCCEEEECCCccEEEEeCCCCC--CeEEEEEecCCCCCCceeeeeecCCcchhhhhhcCCHHHHHH
Confidence 566666788999999999999999999999998543 999999999999888754 58899988899999999999999
Q ss_pred HhCCCccccc
Q 038528 81 AFKRAVLLLG 90 (91)
Q Consensus 81 Af~v~~~~i~ 90 (91)
||+++.++++
T Consensus 173 af~v~~~~v~ 182 (434)
T 2ea7_A 173 SFDSDFKEIN 182 (434)
T ss_dssp HHTSCHHHHH
T ss_pred HhCCCHHHHH
Confidence 9999998875
No 14
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.78 E-value=4.2e-19 Score=139.43 Aligned_cols=87 Identities=14% Similarity=0.393 Sum_probs=77.1
Q ss_pred ccccCCCceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCCCCCCc-eeecCCCccCceecccCHHHHHH
Q 038528 2 SWADEDDIRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDDSYFE-PVIGAYTSISDLILGFDRKVLQS 80 (91)
Q Consensus 2 ~~v~~~~~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~~~~~~-~flag~~~~~ni~~GF~~~iL~~ 80 (91)
++|.++..+++.|++||++.+|+|++||++|++.++ +|+++++++++++|++++ |+++|+..++|+|+||++++|++
T Consensus 83 ~~v~~~~~~~~~l~~GDv~~iP~G~~H~~~N~gg~e--~l~~l~~~~~~~~pg~~~~f~l~g~~~~~~~~~~~~~~vLa~ 160 (416)
T 1uij_A 83 TLVNNDDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQ--NLKMIWLAIPVNKPGRYDDFFLSSTQAQQSYLQGFSHNILET 160 (416)
T ss_dssp EEECSSCEEEEEECTTEEEEECTTCEEEEEECCSSC--CEEEEEEEEESSBTTBCCEEESSCBSSCCCGGGGSCHHHHHH
T ss_pred EEEECCCCeEEEecCCCEEEECCCCeEEEEecCCCC--CEEEEEEeccCCCCCcceeeeecCCcccchhhhcCCHHHHHH
Confidence 567677788999999999999999999999996332 999999999998888755 57889988899999999999999
Q ss_pred HhCCCccccc
Q 038528 81 AFKRAVLLLG 90 (91)
Q Consensus 81 Af~v~~~~i~ 90 (91)
||+++.++++
T Consensus 161 af~v~~~~v~ 170 (416)
T 1uij_A 161 SFHSEFEEIN 170 (416)
T ss_dssp HHTSCHHHHH
T ss_pred HhCcCHHHHH
Confidence 9999998875
No 15
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.34 E-value=1.1e-12 Score=103.63 Aligned_cols=71 Identities=13% Similarity=0.212 Sum_probs=58.8
Q ss_pred eeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCCCCCCceeecCCCccCceecccCHHHHHHHhCCCccccc
Q 038528 11 TLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDDSYFEPVIGAYTSISDLILGFDRKVLQSAFKRAVLLLG 90 (91)
Q Consensus 11 ~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~~~~~~~flag~~~~~ni~~GF~~~iL~~Af~v~~~~i~ 90 (91)
..+|++|||++||+|.++|++|. + +|.++++. +++. .+..+||||.. .|+|++|++++|++||+++.++++
T Consensus 333 ~~~l~~GDV~vvP~G~~~~~~~~--~---~l~~v~f~-~~~~-~~~~~~LAG~~--~sv~~~~~~evla~af~v~~~~v~ 403 (418)
T 3s7i_A 333 TARLKEGDVFIMPAAHPVAINAS--S---ELHLLGFG-INAE-NNHRIFLAGDK--DNVIDQIEKQAKDLAFPGSGEQVE 403 (418)
T ss_dssp EEEECTTCEEEECTTCCEEEEES--S---CEEEEEEE-ESCT-TCCEEESSSST--TBHHHHSCHHHHHHHSSSCHHHHH
T ss_pred EeeeCCCCEEEECCCCEEEEECC--C---CEEEEEEE-cCCC-CCcceEccCch--hhhhhcCCHHHHHHHhCCCHHHHH
Confidence 68899999999999999999985 3 58888864 4443 34567899863 489999999999999999998775
No 16
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=99.30 E-value=1.1e-11 Score=80.83 Aligned_cols=73 Identities=14% Similarity=0.143 Sum_probs=60.9
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCCCCCCceeecCCCccCceecccCHHHHHHHhCCCccc
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDDSYFEPVIGAYTSISDLILGFDRKVLQSAFKRAVLL 88 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~~~~~~~flag~~~~~ni~~GF~~~iL~~Af~v~~~~ 88 (91)
+...+|++|||+.||+|.+++..+. + .|.++++-...++ ....||||+ ..|++++++.++|+.||+++.++
T Consensus 5 ~~~~~l~~G~v~vVPq~~~v~~~A~--~---~le~v~F~tna~~--~~~~~LAG~--~~Svl~~l~~evla~aF~~s~ee 75 (93)
T 1dgw_Y 5 RYAATLSEGDIIVIPSSFPVALKAA--S---DLNMVGIGVNAEN--NERNFLAGH--KENVIRQIPRQVSDLTFPGSGEE 75 (93)
T ss_dssp EEEEEECTTCEEEECTTCCEEEEES--S---SEEEEEEEESCTT--CCEEESSSS--TTBSTTTSCHHHHHHHSSSCTHH
T ss_pred hhhceecCCcEEEECCCCceeEEec--C---CeEEEEEEecCCC--CeeeeccCC--cccHHHhCCHHHHHHHcCCCHHH
Confidence 4567899999999999999999998 3 4999998544422 235699997 46999999999999999999998
Q ss_pred cc
Q 038528 89 LG 90 (91)
Q Consensus 89 i~ 90 (91)
++
T Consensus 76 ~~ 77 (93)
T 1dgw_Y 76 VE 77 (93)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 17
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.14 E-value=1e-10 Score=87.70 Aligned_cols=80 Identities=9% Similarity=0.120 Sum_probs=63.1
Q ss_pred ccccCC-CceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCCCCCCceeecCCCccCceecccCHHHHHH
Q 038528 2 SWADED-DIRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDDSYFEPVIGAYTSISDLILGFDRKVLQS 80 (91)
Q Consensus 2 ~~v~~~-~~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~~~~~~~flag~~~~~ni~~GF~~~iL~~ 80 (91)
+++.++ +++.+.|++||++.||+|+.||+.|.+++ +++++.++++.+..+...+. ..++|++|+.++|++
T Consensus 87 ~v~~~~g~~~~~~l~~GD~~~ip~g~~H~~~n~~~~---~~~~l~v~~~~~~~~~~~~~------~~~~~~~~p~~vLa~ 157 (361)
T 2vqa_A 87 TLTSPEGKVEIADVDKGGLWYFPRGWGHSIEGIGPD---TAKFLLVFNDGTFSEGATFS------VTDWLSHTPIAWVEE 157 (361)
T ss_dssp EEECTTSCEEEEEEETTEEEEECTTCEEEEEECSSS---CEEEEEEESSTTCCTTSSEE------HHHHHHTSCHHHHHH
T ss_pred EEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCC---CEEEEEEECCCCccccceec------HhHHHHhCCHHHHHH
Confidence 345544 45789999999999999999999999864 89999988776642221121 358999999999999
Q ss_pred HhCCCccccc
Q 038528 81 AFKRAVLLLG 90 (91)
Q Consensus 81 Af~v~~~~i~ 90 (91)
+|+++.+.++
T Consensus 158 ~~~v~~~~~~ 167 (361)
T 2vqa_A 158 NLGWTAAQVA 167 (361)
T ss_dssp HHTCCHHHHT
T ss_pred HhCcCHHHHH
Confidence 9999987754
No 18
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.06 E-value=2.1e-10 Score=91.41 Aligned_cols=80 Identities=13% Similarity=0.138 Sum_probs=65.7
Q ss_pred CccccCCCceeee--eccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCCCCCCceeecCCCccCceecccCHHHH
Q 038528 1 MSWADEDDIRTLD--IRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDDSYFEPVIGAYTSISDLILGFDRKVL 78 (91)
Q Consensus 1 l~~v~~~~~~~~~--lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~~~~~~~flag~~~~~ni~~GF~~~iL 78 (91)
+++|..+..+.++ |++|||+.+|+|.+||+.| +++ +|.+++++++.|. ...+++|. .++|+...+++|
T Consensus 356 v~vv~~~g~~~~~~~l~~GDv~v~P~G~~H~~~n-g~~---~~~~l~~~~s~~~---~~~~laG~---~s~~~~~p~~Vl 425 (459)
T 2e9q_A 356 VQVVDNFGQSVFDGEVREGQVLMIPQNFVVIKRA-SDR---GFEWIAFKTNDNA---ITNLLAGR---VSQMRMLPLGVL 425 (459)
T ss_dssp EEEECTTSCEEEEEEEETTCEEEECTTCEEEEEE-EEE---EEEEEEEESSSSC---CEEESSSS---SSHHHHSCHHHH
T ss_pred EEEEeCCCCEEEeeEEeCCcEEEECCCCEEEEEe-CCC---CeEEEEEecCCCC---cceeecch---hHHHHhCCHHHH
Confidence 3567766677776 9999999999999999999 543 8999999977643 23478873 579999999999
Q ss_pred HHHhCCCccccc
Q 038528 79 QSAFKRAVLLLG 90 (91)
Q Consensus 79 ~~Af~v~~~~i~ 90 (91)
+.||+++.++++
T Consensus 426 a~af~v~~~~v~ 437 (459)
T 2e9q_A 426 SNMYRISREEAQ 437 (459)
T ss_dssp HHHHTCCHHHHH
T ss_pred HHHHCcCHHHHH
Confidence 999999988764
No 19
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.04 E-value=5e-10 Score=87.86 Aligned_cols=72 Identities=15% Similarity=0.293 Sum_probs=59.5
Q ss_pred eee--eeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCCCCCCceeecCCCccCceecccCHHHHHHHhCCCcc
Q 038528 10 RTL--DIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDDSYFEPVIGAYTSISDLILGFDRKVLQSAFKRAVL 87 (91)
Q Consensus 10 ~~~--~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~~~~~~~flag~~~~~ni~~GF~~~iL~~Af~v~~~ 87 (91)
+.+ .|++|||+.||+|.+||++|. + +|.++++.++...+ ...+|||+. .++|+++++++|+.||+++.+
T Consensus 305 ~~~~~~l~~Gdv~vvP~g~~h~~~n~--~---~~~~l~f~~~~~~~--~~~~laG~~--~sv~~~~p~~vla~af~~~~~ 375 (416)
T 1uij_A 305 QRYRAELSEDDVFVIPAAYPFVVNAT--S---NLNFLAFGINAENN--QRNFLAGEK--DNVVRQIERQVQELAFPGSAQ 375 (416)
T ss_dssp EEEEEEEETTCEEEECTTCCEEEEES--S---SEEEEEEEETCTTC--CEEESSSST--TBSGGGSCHHHHHHHSSSCHH
T ss_pred EEEEEEecCCcEEEECCCCeEEEEcC--C---CeEEEEEEcCCCCC--cceecccch--hhHHHhCCHHHHHHHHCcCHH
Confidence 355 999999999999999999999 3 69999998866332 235788732 389999999999999999988
Q ss_pred ccc
Q 038528 88 LLG 90 (91)
Q Consensus 88 ~i~ 90 (91)
+++
T Consensus 376 ~v~ 378 (416)
T 1uij_A 376 DVE 378 (416)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 20
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.02 E-value=6.9e-10 Score=89.44 Aligned_cols=80 Identities=11% Similarity=0.091 Sum_probs=64.0
Q ss_pred CccccCCCceeee--eccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCCCCCCceeecCCCccCceecccCHHHH
Q 038528 1 MSWADEDDIRTLD--IRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDDSYFEPVIGAYTSISDLILGFDRKVL 78 (91)
Q Consensus 1 l~~v~~~~~~~~~--lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~~~~~~~flag~~~~~ni~~GF~~~iL 78 (91)
+++|..+..+.++ |++|||+.+|+|.+||..|. ++ .+.++++++..|. -..+|+|. .++|+++++++|
T Consensus 392 v~~V~~~g~~~f~~~l~~GDV~v~P~G~~H~~~a~-~e---~~~~l~f~~s~np---~~~~LaG~---~sv~~~~p~eVL 461 (496)
T 3ksc_A 392 LQVVNCNGNTVFDGELEAGRALTVPQNYAVAAKSL-SD---RFSYVAFKTNDRA---GIARLAGT---SSVINNLPLDVV 461 (496)
T ss_dssp EEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEC-SS---EEEEEEEESSTTC---CEEESSST---TCTTTTSCHHHH
T ss_pred EEEEeCCCcEEEEEEecCCeEEEECCCCEEEEEeC-CC---CEEEEEEECCCCC---ccccccch---hhhhhhCCHHHH
Confidence 4678776566654 99999999999999999876 32 7999998876653 22377775 389999999999
Q ss_pred HHHhCCCccccc
Q 038528 79 QSAFKRAVLLLG 90 (91)
Q Consensus 79 ~~Af~v~~~~i~ 90 (91)
++||+++.++++
T Consensus 462 a~aF~v~~~~v~ 473 (496)
T 3ksc_A 462 AATFNLQRNEAR 473 (496)
T ss_dssp HHHHTCCHHHHH
T ss_pred HHHHCcCHHHHH
Confidence 999999988764
No 21
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.02 E-value=7.2e-10 Score=88.78 Aligned_cols=80 Identities=9% Similarity=0.196 Sum_probs=63.8
Q ss_pred CccccCCCcee--eeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCCCCCCceeecCCCccCceecccCHHHH
Q 038528 1 MSWADEDDIRT--LDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDDSYFEPVIGAYTSISDLILGFDRKVL 78 (91)
Q Consensus 1 l~~v~~~~~~~--~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~~~~~~~flag~~~~~ni~~GF~~~iL 78 (91)
+++|..+..+. ..|++|||+.+|+|.+||+ |.+++ ++.++++++..|. + ..+|+|. .++|++..+++|
T Consensus 357 v~~V~~~g~~~f~~~l~~GDV~v~P~G~~H~~-~ag~e---~~~~l~~f~s~np-~--~~~LaG~---~s~~~~lP~eVl 426 (466)
T 3kgl_A 357 VQVVNDNGDRVFDGQVSQGQLLSIPQGFSVVK-RATSE---QFRWIEFKTNANA-Q--INTLAGR---TSVLRGLPLEVI 426 (466)
T ss_dssp EEEECTTSCEEEEEEEETTCEEEECTTCEEEE-EECSS---EEEEEEEESSSSC-C--EEESSST---TCTGGGSCHHHH
T ss_pred EEEEeCCCcEEEEeEecCCcEEEECCCCeEEE-EcCCC---CEEEEEEECCCCC-c--cccccch---hhhhhhCCHHHH
Confidence 36777664554 4599999999999999999 77754 7999998877754 2 2377774 278999999999
Q ss_pred HHHhCCCccccc
Q 038528 79 QSAFKRAVLLLG 90 (91)
Q Consensus 79 ~~Af~v~~~~i~ 90 (91)
++||+++.++++
T Consensus 427 a~aF~v~~~~v~ 438 (466)
T 3kgl_A 427 SNGYQISLEEAR 438 (466)
T ss_dssp HHHHTCCHHHHH
T ss_pred HHHhCcCHHHHH
Confidence 999999988764
No 22
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=98.99 E-value=1.1e-09 Score=88.48 Aligned_cols=79 Identities=11% Similarity=0.117 Sum_probs=62.5
Q ss_pred ccccCCCceeee--eccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCCCCCCceeecCCCccCceecccCHHHHH
Q 038528 2 SWADEDDIRTLD--IRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDDSYFEPVIGAYTSISDLILGFDRKVLQ 79 (91)
Q Consensus 2 ~~v~~~~~~~~~--lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~~~~~~~flag~~~~~ni~~GF~~~iL~ 79 (91)
+++.++..+.+. |++|||+.||+|++||+.| +++ .|.++++..+.+. ...+++|. .++|....+++|+
T Consensus 407 ~vv~~~G~~~~~~~l~~GDv~viP~G~~H~~~N-g~e---~l~~l~f~~s~~p---~~~~LaG~---~svf~~lp~eVla 476 (510)
T 3c3v_A 407 QVVDSNGNRVYDEELQEGHVLVVPQNFAVAGKS-QSD---NFEYVAFKTDSRP---SIANLAGE---NSVIDNLPEEVVA 476 (510)
T ss_dssp EEECTTSCEEEEEEEETTCEEEECTTCEEEEEE-CSS---EEEEEEEESSSSC---CEEESSST---TSTTTTSCHHHHH
T ss_pred EEEeCCCCEEEeEEEcCCcEEEECCCCeEEEEe-CCC---CEEEEEEECCCCc---ceeecccH---hHHHHhCCHHHHH
Confidence 445554445555 9999999999999999999 654 8999998865533 23477774 4899999999999
Q ss_pred HHhCCCccccc
Q 038528 80 SAFKRAVLLLG 90 (91)
Q Consensus 80 ~Af~v~~~~i~ 90 (91)
+||+++.++++
T Consensus 477 ~aF~v~~e~v~ 487 (510)
T 3c3v_A 477 NSYGLPREQAR 487 (510)
T ss_dssp HHHTCCHHHHH
T ss_pred HHHCcCHHHHH
Confidence 99999988764
No 23
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=98.98 E-value=1.5e-09 Score=86.77 Aligned_cols=79 Identities=14% Similarity=0.178 Sum_probs=62.2
Q ss_pred ccccCCCceeee--eccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCCCCCCceeecCCCccCceecccCHHHHH
Q 038528 2 SWADEDDIRTLD--IRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDDSYFEPVIGAYTSISDLILGFDRKVLQ 79 (91)
Q Consensus 2 ~~v~~~~~~~~~--lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~~~~~~~flag~~~~~ni~~GF~~~iL~ 79 (91)
+++.++..+.+. |++|||+.||+|.+||+.| +++ .|.++++..+.+. ...+++|. .++|+...+++|+
T Consensus 373 ~v~~~~G~~~~~~~l~~GDv~viP~G~~H~~~n-g~~---~l~~l~f~~s~~p---~~~~laG~---~s~~~~~p~~Vla 442 (476)
T 1fxz_A 373 QVVNCNGERVFDGELQEGRVLIVPQNFVVAARS-QSD---NFEYVSFKTNDTP---MIGTLAGA---NSLLNALPEEVIQ 442 (476)
T ss_dssp EEECTTSCEEEEEEEETTCEEEECTTCEEEEEE-CST---TEEEEEEESSSSC---CEEESSST---TCTGGGSCHHHHH
T ss_pred EEEecCCCEEeeeEEcCCCEEEECCCCeEEEEe-CCC---CEEEEEEECCCCC---ceeEccch---hHHHHhCCHHHHH
Confidence 345554455555 9999999999999999999 654 8999998865543 23377773 4899999999999
Q ss_pred HHhCCCccccc
Q 038528 80 SAFKRAVLLLG 90 (91)
Q Consensus 80 ~Af~v~~~~i~ 90 (91)
+||+++.++++
T Consensus 443 ~af~~~~~~v~ 453 (476)
T 1fxz_A 443 HTFNLKSQQAR 453 (476)
T ss_dssp HHHTCCHHHHH
T ss_pred HHhCcCHHHHH
Confidence 99999988764
No 24
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=98.92 E-value=1.6e-09 Score=76.48 Aligned_cols=69 Identities=12% Similarity=0.163 Sum_probs=56.6
Q ss_pred eeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCCCCCCceeecCCCccCceecc---cCHHHHHHHhCCCcc
Q 038528 11 TLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDDSYFEPVIGAYTSISDLILG---FDRKVLQSAFKRAVL 87 (91)
Q Consensus 11 ~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~~~~~~~flag~~~~~ni~~G---F~~~iL~~Af~v~~~ 87 (91)
.+.|++||++.+|+|+.||+.|.++. +++++.++...+. +. ..+ ..++|.+ +++++|++||+++.+
T Consensus 120 ~~~l~~GD~~~iP~g~~H~~~N~g~~---~~~~l~v~~~~~p-~~--~~~-----~~~~~~~~~~~~~~vl~~af~~~~~ 188 (201)
T 1fi2_A 120 SRVVRAGETFVIPRGLMHFQFNVGKT---EAYMVVSFNSQNP-GI--VFV-----PLTLFGSDPPIPTPVLTKALRVEAG 188 (201)
T ss_dssp EEEEETTCEEEECTTCCEEEEECSSS---CEEEEEEESSSCC-CC--EEH-----HHHHHHCSSCCCHHHHHHHHTSCHH
T ss_pred EEEECCCCEEEECCCCeEEEEeCCCC---CEEEEEEECCCCC-Ce--Eeh-----hhHHhcCCCCCCHHHHHHHHCcCHH
Confidence 88999999999999999999999875 8999998866553 21 112 1368886 999999999999988
Q ss_pred ccc
Q 038528 88 LLG 90 (91)
Q Consensus 88 ~i~ 90 (91)
+++
T Consensus 189 ~v~ 191 (201)
T 1fi2_A 189 VVE 191 (201)
T ss_dssp HHH
T ss_pred HHH
Confidence 875
No 25
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=98.90 E-value=1.2e-09 Score=85.60 Aligned_cols=73 Identities=12% Similarity=0.187 Sum_probs=59.8
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCCCCCCceeecCCCccCceecccC-----HHHHHHHhC
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDDSYFEPVIGAYTSISDLILGFD-----RKVLQSAFK 83 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~~~~~~~flag~~~~~ni~~GF~-----~~iL~~Af~ 83 (91)
.....|++|||+.||+|.+||+.|.+ +|.++++..++..++ ..+|||+. .++|+++. +++|+.||+
T Consensus 289 ~~~~~l~~GDV~vvP~G~~h~~~n~~-----~l~~l~f~~~s~~~~--~~~laG~~--~sv~~~~p~~~~~~eVla~af~ 359 (397)
T 2phl_A 289 SYRAELSKDDVFVIPAAYPVAIKATS-----NVNFTGFGINANNNN--RNLLAGKT--DNVISSIGRALDGKDVLGLTFS 359 (397)
T ss_dssp EEEEEEETTCEEEECTTCCEEEEESS-----SEEEEEEEESCTTCC--EEESSSSS--SBHHHHHHTSTTHHHHHHHHSS
T ss_pred EEEEEecCCCEEEECCCCeEEEEeCC-----CeEEEEEECCCCCCc--ceecccch--hhHHhhCCCccchHHHHHHHhC
Confidence 44788999999999999999999993 599999887664432 45888732 38899988 999999999
Q ss_pred CCccccc
Q 038528 84 RAVLLLG 90 (91)
Q Consensus 84 v~~~~i~ 90 (91)
++.++++
T Consensus 360 v~~~~v~ 366 (397)
T 2phl_A 360 GSGDEVM 366 (397)
T ss_dssp SCHHHHH
T ss_pred cCHHHHH
Confidence 9988764
No 26
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=98.87 E-value=7.4e-09 Score=81.74 Aligned_cols=71 Identities=14% Similarity=0.262 Sum_probs=58.5
Q ss_pred ee--eeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCCCCCCceeecCCCccCceecccCHHHHHHHhCCCccc
Q 038528 11 TL--DIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDDSYFEPVIGAYTSISDLILGFDRKVLQSAFKRAVLL 88 (91)
Q Consensus 11 ~~--~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~~~~~~~flag~~~~~ni~~GF~~~iL~~Af~v~~~~ 88 (91)
.+ .|++|||+.||+|.+||++|. + +|.++++..+...++ ..++||+. .++|++..+++|+.||+++.++
T Consensus 322 ~~~~~l~~Gdv~vvP~g~~h~~~n~--~---~~~~v~f~~~~~~~~--~~~laG~~--~sv~~~~p~~vla~af~v~~~~ 392 (434)
T 2ea7_A 322 RYRAELSEDDVFVIPAAYPVAINAT--S---NLNFFAFGINAENNR--RNFLAGGK--DNVMSEIPTEVLEVSFPASGKK 392 (434)
T ss_dssp EEEEEECTTCEEEECTTCCEEEEES--S---SEEEEEEEETCTTCC--EEESSSST--TBGGGGSCHHHHHHHSSSCHHH
T ss_pred EEEEEecCCcEEEECCCCeEEEEcC--C---CeEEEEEECCCCCCC--ceecccch--hhhhhhCCHHHHHHHHCcCHHH
Confidence 55 899999999999999999999 3 699999887664422 34788732 3899999999999999999877
Q ss_pred cc
Q 038528 89 LG 90 (91)
Q Consensus 89 i~ 90 (91)
++
T Consensus 393 v~ 394 (434)
T 2ea7_A 393 VE 394 (434)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 27
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=98.83 E-value=7.6e-09 Score=77.51 Aligned_cols=69 Identities=17% Similarity=0.220 Sum_probs=57.2
Q ss_pred eeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCCCCCCceeecCCCccCceecccCHHHHHHHhCCCcccc
Q 038528 10 RTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDDSYFEPVIGAYTSISDLILGFDRKVLQSAFKRAVLLL 89 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~~~~~~~flag~~~~~ni~~GF~~~iL~~Af~v~~~~i 89 (91)
..+.|++||++.+|+|+.|++.|.++. +++++.+..+.+. . ...++ ++++++++++|++||+++.+++
T Consensus 278 ~~~~l~~GD~~~ip~~~~H~~~n~~~~---~~~~l~~~~~~~~-~--~~~~~------~~~~~~~~~vl~~~f~~~~~~~ 345 (361)
T 2vqa_A 278 SVSRLQQGDVGYVPKGYGHAIRNSSQK---PLDIVVVFNDGDY-Q--SIDLS------TWLASNPSSVLGNTFQISPELT 345 (361)
T ss_dssp EEEEECTTCEEEECTTCEEEEECCSSS---CEEEEEEESSSSC-C--CEEHH------HHHHTSCHHHHHHHHTCCHHHH
T ss_pred EEEEECCCCEEEECCCCeEEeEECCCC---CEEEEEEECCCCc-c--eeeHH------HHhhhCCHHHHHHHHCcCHHHH
Confidence 589999999999999999999999875 8999998866442 1 11222 5889999999999999999887
Q ss_pred c
Q 038528 90 G 90 (91)
Q Consensus 90 ~ 90 (91)
+
T Consensus 346 ~ 346 (361)
T 2vqa_A 346 K 346 (361)
T ss_dssp T
T ss_pred H
Confidence 6
No 28
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=98.83 E-value=4.5e-09 Score=84.17 Aligned_cols=80 Identities=8% Similarity=0.117 Sum_probs=62.8
Q ss_pred CccccCCCceeee--eccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCCCCCCceeecCCCccCceecccCHHHH
Q 038528 1 MSWADEDDIRTLD--IRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDDSYFEPVIGAYTSISDLILGFDRKVL 78 (91)
Q Consensus 1 l~~v~~~~~~~~~--lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~~~~~~~flag~~~~~ni~~GF~~~iL 78 (91)
+++|..+..+.++ |++|||+.+|+|.+||.. .+++ ++.++++++..|. -..+|||. .++|++.++++|
T Consensus 357 v~vV~~~g~~~f~~~l~~GDVfvvP~g~~h~~~-ag~e---~~~~l~f~~s~np---~~~~LaG~---~sv~~~ip~eVl 426 (465)
T 3qac_A 357 IQIVNDQGQSVFDEELSRGQLVVVPQNFAIVKQ-AFED---GFEWVSFKTSENA---MFQSLAGR---TSAIRSLPIDVV 426 (465)
T ss_dssp EEEECTTSCEEEEEEEETTCEEEECTTCEEEEE-EEEE---EEEEEEEESSTTC---CEEESSSS---SBHHHHSCHHHH
T ss_pred EEEEeCCCcEEEEEEecCCeEEEECCCcEEEEE-cCCC---CeEEEEEecCCCC---cccccccc---hhhhhhCCHHHH
Confidence 3567766556554 999999999999999986 4543 8999998866553 23367775 289999999999
Q ss_pred HHHhCCCccccc
Q 038528 79 QSAFKRAVLLLG 90 (91)
Q Consensus 79 ~~Af~v~~~~i~ 90 (91)
++||+++.++++
T Consensus 427 a~aF~v~~e~v~ 438 (465)
T 3qac_A 427 SNIYQISREEAF 438 (465)
T ss_dssp HHHHTCCHHHHH
T ss_pred HHHhCCCHHHHH
Confidence 999999988764
No 29
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=98.81 E-value=1.3e-08 Score=80.60 Aligned_cols=72 Identities=14% Similarity=0.202 Sum_probs=58.0
Q ss_pred eeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCCCCCCceeecCCCccCceecccCHHHHHHHhCCCcccc
Q 038528 10 RTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDDSYFEPVIGAYTSISDLILGFDRKVLQSAFKRAVLLL 89 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~~~~~~~flag~~~~~ni~~GF~~~iL~~Af~v~~~~i 89 (91)
-...|++|||+.+|+|.+||.+|. + +|.++++...+..++ ..++||+. .++|++.++++|+.||+++.+++
T Consensus 336 ~~~~l~~GdV~vvP~g~~h~~~n~--~---~~~~v~f~~~~~~~~--~~~laG~~--~sv~~~~p~~vla~af~v~~~~v 406 (445)
T 2cav_A 336 YAATLSEGDIIVIPSSFPVALKAA--S---DLNMVGIGVNAENNE--RNFLAGHK--ENVIRQIPRQVSDLTFPGSGEEV 406 (445)
T ss_dssp EEEEECTTCEEEECTTCCEEEEES--S---SEEEEEEEESCTTCC--EEESSSST--TBSGGGSCHHHHHHHSSSCHHHH
T ss_pred EEeEecCCcEEEEcCCcEEEEEcC--C---CeEEEEEEccCCCCC--cEEcccch--hhhhhhCCHHHHHHHHCcCHHHH
Confidence 366799999999999999999999 3 588888765442322 34888732 38999999999999999998876
Q ss_pred c
Q 038528 90 G 90 (91)
Q Consensus 90 ~ 90 (91)
+
T Consensus 407 ~ 407 (445)
T 2cav_A 407 E 407 (445)
T ss_dssp H
T ss_pred H
Confidence 4
No 30
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=98.74 E-value=1.6e-08 Score=82.31 Aligned_cols=79 Identities=10% Similarity=0.173 Sum_probs=59.4
Q ss_pred ccccCCCc--eeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCCCCCCceeecCCCccCceecccCHHHHH
Q 038528 2 SWADEDDI--RTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDDSYFEPVIGAYTSISDLILGFDRKVLQ 79 (91)
Q Consensus 2 ~~v~~~~~--~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~~~~~~~flag~~~~~ni~~GF~~~iL~ 79 (91)
++|.++.. ....|++|||+.||+|++||..+ +++ .|.++++.+. .+++ ..+|+|. .++|..+++++|+
T Consensus 429 ~~V~~~G~~v~~~~L~~GDV~v~P~G~~H~~~a-g~e---~l~flaF~ss-~np~--~~~LaG~---~svf~~lP~eVLa 498 (531)
T 3fz3_A 429 QVVNENGDAILDQEVQQGQLFIVPQNHGVIQQA-GNQ---GFEYFAFKTE-ENAF--INTLAGR---TSFLRALPDEVLA 498 (531)
T ss_dssp EEECTTSCEEEEEEEETTCEEEECTTCEEEEEE-EEE---EEEEEEEESS-TTCC--EEESSST---TCHHHHSCHHHHH
T ss_pred EEEeCCCcEEEEEEecCCeEEEECCCCeEEEec-CCC---CEEEEEEecC-CCCc--ceeccch---hHHHHhCCHHHHH
Confidence 56766533 36789999999999999998775 433 7998865443 3322 2377775 4789999999999
Q ss_pred HHhCCCccccc
Q 038528 80 SAFKRAVLLLG 90 (91)
Q Consensus 80 ~Af~v~~~~i~ 90 (91)
+||+++.++++
T Consensus 499 ~aF~v~~e~v~ 509 (531)
T 3fz3_A 499 NAYQISREQAR 509 (531)
T ss_dssp HHHTCCHHHHH
T ss_pred HHhCcCHHHHH
Confidence 99999988764
No 31
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=98.69 E-value=1.6e-08 Score=81.24 Aligned_cols=76 Identities=14% Similarity=0.217 Sum_probs=58.4
Q ss_pred ccccCCCceee--eeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCCCCCCceeecCCCccCceecccCHHHHH
Q 038528 2 SWADEDDIRTL--DIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDDSYFEPVIGAYTSISDLILGFDRKVLQ 79 (91)
Q Consensus 2 ~~v~~~~~~~~--~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~~~~~~~flag~~~~~ni~~GF~~~iL~ 79 (91)
+++.++..+.+ .|++|||+.||+|++||+.|. ++ .+.+++++.+.+. + ..++ .++|..+++++|+
T Consensus 402 ~v~~~~g~~~~~~~l~~GDv~vvP~G~~H~~~n~-~e---~~~~l~~~ts~~p-~--~~~l------~s~~~~~p~eVla 468 (493)
T 2d5f_A 402 RVVNAQGNAVFDGELRRGQLLVVPQNFVVAEQGG-EQ---GLEYVVFKTHHNA-V--SSYI------KDVFRAIPSEVLS 468 (493)
T ss_dssp EEECTTSCEEEEEEEETTCEEEECTTCEEEEEEE-EE---EEEEEEEESSTTC-C--EEEH------HHHHHHSCHHHHH
T ss_pred EEEcCCCCEEEeEEEcCCCEEEECCCCeEeeeeC-CC---CEEEEEEECCCCC-c--ceeH------HHHHHhCCHHHHH
Confidence 34454444554 499999999999999999985 32 8999998865544 2 1233 5899999999999
Q ss_pred HHhCCCccccc
Q 038528 80 SAFKRAVLLLG 90 (91)
Q Consensus 80 ~Af~v~~~~i~ 90 (91)
+||+++.++++
T Consensus 469 ~aF~v~~~~v~ 479 (493)
T 2d5f_A 469 NSYNLGQSQVR 479 (493)
T ss_dssp HHHTCCHHHHH
T ss_pred HHHCcCHHHHH
Confidence 99999988764
No 32
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=98.63 E-value=4.8e-08 Score=73.94 Aligned_cols=78 Identities=17% Similarity=0.191 Sum_probs=58.8
Q ss_pred cccCC-CceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCCCCCCceeecCCCccCceecccCHHHHHHH
Q 038528 3 WADED-DIRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDDSYFEPVIGAYTSISDLILGFDRKVLQSA 81 (91)
Q Consensus 3 ~v~~~-~~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~~~~~~~flag~~~~~ni~~GF~~~iL~~A 81 (91)
+++++ +...+.|++||++.+|+|+.|++.|.++ .++++.++++... .....|. ..++|.+++.++|+++
T Consensus 114 ~~~~~g~~~~~~l~~GD~~~ip~g~~H~~~n~~~----~~~~~~v~~~~~~-~~~~~~~-----~~~~~~~~p~evla~~ 183 (385)
T 1j58_A 114 IVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALEE----GAEFLLVFDDGSF-SENSTFQ-----LTDWLAHTPKEVIAAN 183 (385)
T ss_dssp EECTTSCEEEEEEETTEEEEECTTCCEEEEEEEE----EEEEEEEESCTTC-CGGGEEE-----HHHHHHTSCHHHHHHH
T ss_pred EEeCCCcEEEEEeCCCCEEEECCCCeEEEEECCC----CEEEEEEECCCCc-cccchhh-----hhhhhhcccHHHHHHH
Confidence 34433 3336799999999999999999999863 5888888866554 2222232 2579999999999999
Q ss_pred hCCCccccc
Q 038528 82 FKRAVLLLG 90 (91)
Q Consensus 82 f~v~~~~i~ 90 (91)
|+++.+.++
T Consensus 184 ~~vs~~~~~ 192 (385)
T 1j58_A 184 FGVTKEEIS 192 (385)
T ss_dssp HTCCTGGGT
T ss_pred hCCCHHHHH
Confidence 999987654
No 33
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=98.62 E-value=5.6e-08 Score=73.60 Aligned_cols=70 Identities=19% Similarity=0.237 Sum_probs=57.5
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCCCCCCceeecCCCccCceecccCHHHHHHHhCCCccc
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDDSYFEPVIGAYTSISDLILGFDRKVLQSAFKRAVLL 88 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~~~~~~~flag~~~~~ni~~GF~~~iL~~Af~v~~~~ 88 (91)
.+.+.|++||++.+|+|+.|++.|.++. +++++.++.+....+ + ...+.|..+++++|+++|+++.++
T Consensus 300 ~~~~~l~~GD~~~ip~~~~H~~~n~~~~---~~~~l~v~~~~~~~d----~-----~~~~~l~~~~~~v~~~~f~~~~~~ 367 (385)
T 1j58_A 300 ARTFNYQAGDVGYVPFAMGHYVENIGDE---PLVFLEIFKDDHYAD----V-----SLNQWLAMLPETFVQAHLDLGKDF 367 (385)
T ss_dssp EEEEEEESSCEEEECTTCBEEEEECSSS---CEEEEEEESSSSCCC----E-----EHHHHHHTSCHHHHHHHHTCCHHH
T ss_pred EEEEEEcCCCEEEECCCCeEEEEECCCC---CEEEEEEECCCCccc----c-----CHHHHHHhCCHHHHHHHhCCCHHH
Confidence 4789999999999999999999999875 899999886543211 1 113678899999999999999988
Q ss_pred cc
Q 038528 89 LG 90 (91)
Q Consensus 89 i~ 90 (91)
++
T Consensus 368 ~~ 369 (385)
T 1j58_A 368 TD 369 (385)
T ss_dssp HT
T ss_pred HH
Confidence 76
No 34
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=97.87 E-value=5.1e-05 Score=50.89 Aligned_cols=70 Identities=6% Similarity=0.177 Sum_probs=49.5
Q ss_pred CceeeeeccCcEEEeCCCCeEEEeeCC-CCCcccEEEEEEeecCCCCCC-Cceee-cCCCccCceecccCHHHHHH
Q 038528 8 DIRTLDIRRGDVYRLQPGSVFYIESNL-EQEREKLRIYAIFSNTEDDSY-FEPVI-GAYTSISDLILGFDRKVLQS 80 (91)
Q Consensus 8 ~~~~~~lr~GDv~~ipaG~~~y~~N~~-~~e~~~L~i~~l~d~~n~~~~-~~~fl-ag~~~~~ni~~GF~~~iL~~ 80 (91)
+.+.+.+++||++.||+|+.|++.|.+ +. +++++.+..+...... +..++ .......++...|+++.+++
T Consensus 86 ~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~---~~~~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (163)
T 1lr5_A 86 QPQEIPFFQNTTFSIPVNDPHQVWNSDEHE---DLQVLVIISRPPAKIFLYDDWSMPHTAAVLKFPFVWDEDCFEA 158 (163)
T ss_dssp SCEEEEECTTEEEEECTTCCEEEECCCSSS---CEEEEEEEESSSCCEEEESSTTSCGGGCEEESSCTTTHHHHHH
T ss_pred ccEEEEeCCCCEEEECCCCcEEeEeCCCCC---CEEEEEEECCCCcccccccccccCCcCccceeccccccccccc
Confidence 348899999999999999999999998 54 8999888866432100 11122 11223346778899999986
No 35
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=97.81 E-value=3.5e-05 Score=49.11 Aligned_cols=38 Identities=13% Similarity=0.239 Sum_probs=32.8
Q ss_pred CCc-eeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEe
Q 038528 7 DDI-RTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIF 47 (91)
Q Consensus 7 ~~~-~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~ 47 (91)
+.+ +...++.||++.+|+|+.|++.|.++. +|+++.+-
T Consensus 55 dG~~~~~~l~aGd~~~~p~G~~H~~~N~g~~---~l~fi~vE 93 (98)
T 2ozi_A 55 DGTRSLAQLKTGRSYARKAGVQHDVRNESTA---EIVFLEIE 93 (98)
T ss_dssp TSCEECCCBCTTCCEEECTTCEEEEEECSSS---CEEEEEEE
T ss_pred CCcEEEEEECCCCEEEECCCCceeCEECCCC---CEEEEEEE
Confidence 444 578899999999999999999999986 89988764
No 36
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=97.80 E-value=4.4e-05 Score=48.62 Aligned_cols=42 Identities=12% Similarity=0.175 Sum_probs=36.2
Q ss_pred CceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCC
Q 038528 8 DIRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTED 52 (91)
Q Consensus 8 ~~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~ 52 (91)
+.+.+.|++||++.+|+|+.|++.|.++. +++++.++.+...
T Consensus 77 ~~~~~~l~~Gd~~~i~~~~~H~~~n~~~~---~~~~l~v~~p~~~ 118 (125)
T 3h8u_A 77 NGIVTHLKAGDIAIAKPGQVHGAMNSGPE---PFIFVSVVAPGNA 118 (125)
T ss_dssp TTCEEEEETTEEEEECTTCCCEEEECSSS---CEEEEEEEESTTC
T ss_pred CCeEEEeCCCCEEEECCCCEEEeEeCCCC---CEEEEEEECCCcc
Confidence 34678999999999999999999999875 8999998876543
No 37
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=97.74 E-value=0.00012 Score=44.92 Aligned_cols=41 Identities=12% Similarity=0.215 Sum_probs=34.8
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCC
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTED 52 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~ 52 (91)
.+.+.|++||++.+|+|+.|.+.|.++. +++++.+..+..-
T Consensus 61 ~~~~~l~~Gd~~~i~~~~~H~~~~~~~~---~~~~~~v~~~~~~ 101 (113)
T 2gu9_A 61 GHTQALQAGSLIAIERGQAHEIRNTGDT---PLKTVNFYHPPAY 101 (113)
T ss_dssp TEEEEECTTEEEEECTTCCEEEECCSSS---CEEEEEEEESCCB
T ss_pred CEEEEeCCCCEEEECCCCcEEeEcCCCC---CEEEEEEECCCCc
Confidence 4678999999999999999999999765 7888888766543
No 38
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=97.64 E-value=0.00017 Score=43.44 Aligned_cols=39 Identities=5% Similarity=-0.032 Sum_probs=33.4
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecC
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNT 50 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~ 50 (91)
.+.+.+++||++.+|+|+.|.+.|.++. +++++.+..+.
T Consensus 66 ~~~~~l~~Gd~~~ip~~~~H~~~~~~~~---~~~~~~v~~p~ 104 (105)
T 1v70_A 66 EEEALLAPGMAAFAPAGAPHGVRNESAS---PALLLVVTAPR 104 (105)
T ss_dssp TEEEEECTTCEEEECTTSCEEEECCSSS---CEEEEEEEESC
T ss_pred CEEEEeCCCCEEEECCCCcEEeEeCCCC---CEEEEEEeCCC
Confidence 3678999999999999999999999765 78888877653
No 39
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=97.51 E-value=0.00027 Score=49.27 Aligned_cols=41 Identities=12% Similarity=0.150 Sum_probs=35.5
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCC
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTED 52 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~ 52 (91)
...+.+++||++.+|+|+.|++.|.++. +++++++..+...
T Consensus 118 ~~~~~l~~GD~v~ip~g~~H~~~N~g~~---~~~~l~v~~~~~~ 158 (190)
T 1x82_A 118 AKWISMEPGTVVYVPPYWAHRTVNIGDE---PFIFLAIYPADAG 158 (190)
T ss_dssp EEEEEECTTCEEEECTTCEEEEEECSSS---CEEEEEEEETTCC
T ss_pred EEEEEECCCcEEEECCCCeEEEEECCcc---cEEEEEEECCCcc
Confidence 3468999999999999999999999875 8999998877653
No 40
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=97.50 E-value=0.00015 Score=45.83 Aligned_cols=36 Identities=11% Similarity=0.227 Sum_probs=31.8
Q ss_pred CceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEE
Q 038528 8 DIRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAI 46 (91)
Q Consensus 8 ~~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l 46 (91)
..+...++.||.+.+|+|+.|.+.|.++. +|++|-+
T Consensus 57 ~~~~~~l~~G~~~~ip~G~~H~~~N~g~~---pl~~IeV 92 (98)
T 3lag_A 57 TRSLAQLKTGRSYARKAGVQHDVRNESTA---EIVFLEI 92 (98)
T ss_dssp CEECCCBCTTCCEEECTTCEEEEBCCSSS---CEEEEEE
T ss_pred ceEEEEecCCcEEEEcCCCcEECEECCCC---eEEEEEE
Confidence 34667899999999999999999999986 8998876
No 41
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=97.41 E-value=0.00032 Score=43.28 Aligned_cols=35 Identities=17% Similarity=0.177 Sum_probs=30.7
Q ss_pred eeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEe
Q 038528 10 RTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIF 47 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~ 47 (91)
+.+.|+.||.+.+|+|+.|++.|.++. +++++.+-
T Consensus 59 ~~~~l~~Gd~~~~p~~~~H~~~N~g~~---~~~~l~v~ 93 (97)
T 2fqp_A 59 VTSQLTRGVSYTRPEGVEHNVINPSDT---EFVFVEIE 93 (97)
T ss_dssp EEEEECTTCCEEECTTCEEEEECCSSS---CEEEEEEE
T ss_pred EEEEEcCCCEEEeCCCCcccCEeCCCC---cEEEEEEE
Confidence 688999999999999999999999876 68776653
No 42
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=97.39 E-value=0.00039 Score=46.38 Aligned_cols=40 Identities=15% Similarity=0.092 Sum_probs=35.0
Q ss_pred ceeeeeccCcEEEeCCC-CeEEEeeCCCCCcccEEEEEEeecCC
Q 038528 9 IRTLDIRRGDVYRLQPG-SVFYIESNLEQEREKLRIYAIFSNTE 51 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG-~~~y~~N~~~~e~~~L~i~~l~d~~n 51 (91)
.+.+.|++||++.+|+| +.|++.|.++. +++++.+..+..
T Consensus 85 ~~~~~l~~Gd~i~i~~~~~~H~~~n~~~~---~~~~l~v~~p~~ 125 (162)
T 3l2h_A 85 NDQYPIAPGDFVGFPCHAAAHSISNDGTE---TLVCLVIGQRLD 125 (162)
T ss_dssp TEEEEECTTCEEEECTTSCCEEEECCSSS---CEEEEEEEECCS
T ss_pred CEEEEeCCCCEEEECCCCceEEeEeCCCC---CEEEEEEECCCC
Confidence 35799999999999997 99999999875 899998887764
No 43
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=97.37 E-value=0.0006 Score=45.08 Aligned_cols=38 Identities=11% Similarity=0.292 Sum_probs=33.3
Q ss_pred eeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCC
Q 038528 12 LDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTED 52 (91)
Q Consensus 12 ~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~ 52 (91)
+.|+.||++.+|+|+.|++.|.++. +++++.+..+...
T Consensus 90 ~~l~~Gd~i~ip~g~~H~~~n~~~~---~~~~l~i~~~~~~ 127 (148)
T 2oa2_A 90 EEVFDDYAILIPAGTWHNVRNTGNR---PLKLYSIYAPPQH 127 (148)
T ss_dssp EEEETTCEEEECTTCEEEEEECSSS---CEEEEEEEESCCS
T ss_pred EEECCCCEEEECCCCcEEEEECCCC---CEEEEEEECCCCC
Confidence 8999999999999999999999875 7988888766554
No 44
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=97.36 E-value=0.00046 Score=47.23 Aligned_cols=41 Identities=17% Similarity=0.170 Sum_probs=36.2
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCC-CCCcccEEEEEEeecCCC
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNL-EQEREKLRIYAIFSNTED 52 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~-~~e~~~L~i~~l~d~~n~ 52 (91)
.+.+.|+.||++.||+|+.+++.|.+ +. +++++++..+...
T Consensus 93 ~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~---~~~~l~i~~~~~d 134 (167)
T 3ibm_A 93 DRVEPLTPLDCVYIAPHAWHQIHATGANE---PLGFLCIVDSDRD 134 (167)
T ss_dssp TEEEEECTTCEEEECTTCCEEEEEESSSC---CEEEEEEEESSCC
T ss_pred CEEEEECCCCEEEECCCCcEEEEeCCCCC---CEEEEEEEeCCcC
Confidence 35899999999999999999999998 64 8999999987754
No 45
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=97.24 E-value=0.001 Score=42.26 Aligned_cols=42 Identities=14% Similarity=0.230 Sum_probs=34.9
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCCC
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDD 53 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~~ 53 (91)
.+.+.+++||++.+|+|+++.+.|.++. +++++.+..+...+
T Consensus 65 ~~~~~l~~Gd~i~i~~~~~H~~~~~~~~---~~~~~~i~~~~~~~ 106 (125)
T 3cew_A 65 GEKIELQAGDWLRIAPDGKRQISAASDS---PIGFLCIQVKAGSL 106 (125)
T ss_dssp TEEEEEETTEEEEECTTCCEEEEEBTTB---CEEEEEEEEETTCC
T ss_pred CEEEEeCCCCEEEECCCCcEEEEcCCCC---CEEEEEEEcCCccc
Confidence 4678999999999999999999998764 78888877665543
No 46
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=97.22 E-value=0.00062 Score=43.76 Aligned_cols=39 Identities=15% Similarity=0.182 Sum_probs=34.1
Q ss_pred eeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCC
Q 038528 10 RTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTE 51 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n 51 (91)
+.+.++.||++.+|+|+.|.+.|.++. +++++.+..+..
T Consensus 79 ~~~~l~~Gd~~~ip~~~~H~~~~~~~~---~~~~l~i~~~~~ 117 (145)
T 3ht1_A 79 RTEEVGPGEAIFIPRGEPHGFVTGPGQ---TCRFLVVAPCER 117 (145)
T ss_dssp EEEEECTTCEEEECTTCCBEEECCTTC---CEEEEEEEESCC
T ss_pred EEEEECCCCEEEECCCCeEEeEcCCCC---CEEEEEEECCCC
Confidence 688999999999999999999999875 788888886654
No 47
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=97.13 E-value=0.00085 Score=42.82 Aligned_cols=35 Identities=14% Similarity=0.051 Sum_probs=29.5
Q ss_pred eeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEee
Q 038528 12 LDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFS 48 (91)
Q Consensus 12 ~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d 48 (91)
+.|++||.+.||||+.|.+.|.+++. +.++++++-
T Consensus 75 ~~l~~Gd~i~ipa~~~H~~~n~~~~~--~~~~l~v~~ 109 (112)
T 2opk_A 75 RVMRPGDWLHVPAHCRHRVAWTDGGE--PTVWLAVHC 109 (112)
T ss_dssp EEECTTEEEEECTTCCEEEEEECSSS--CEEEEEEEE
T ss_pred EEECCCCEEEECCCCcEEEEeCCCCC--CEEEEEEEE
Confidence 89999999999999999999998653 566666654
No 48
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=97.12 E-value=0.0011 Score=43.18 Aligned_cols=36 Identities=25% Similarity=0.354 Sum_probs=31.4
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEe
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIF 47 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~ 47 (91)
.+.+.|++||++.+|+|+.+++.|.++. +++++.+.
T Consensus 95 ~~~~~l~~Gd~i~i~~~~~H~~~n~~~~---~~~~l~v~ 130 (133)
T 1o4t_A 95 GKDVPIKAGDVCFTDSGESHSIENTGNT---DLEFLAVI 130 (133)
T ss_dssp TEEEEEETTEEEEECTTCEEEEECCSSS---CEEEEEEE
T ss_pred CEEEEeCCCcEEEECCCCcEEeEECCCC---CEEEEEEE
Confidence 4688999999999999999999999875 78877665
No 49
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=97.09 E-value=0.0011 Score=41.65 Aligned_cols=37 Identities=8% Similarity=0.184 Sum_probs=31.0
Q ss_pred eee-eeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeec
Q 038528 10 RTL-DIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSN 49 (91)
Q Consensus 10 ~~~-~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~ 49 (91)
+.+ .++.||++.+|+|+.|++.|.++. +++++.+..+
T Consensus 65 ~~~~~l~~Gd~i~ip~~~~H~~~~~~~~---~~~~l~i~~~ 102 (117)
T 2b8m_A 65 QEPHNYKEGNIVYVPFNVKMLIQNINSD---ILEFFVVKAP 102 (117)
T ss_dssp SCCEEEETTCEEEECTTCEEEEECCSSS---EEEEEEEECS
T ss_pred EEEEEeCCCCEEEECCCCcEEeEcCCCC---CEEEEEEECC
Confidence 346 899999999999999999999775 7888877433
No 50
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=97.08 E-value=0.0014 Score=44.53 Aligned_cols=41 Identities=17% Similarity=0.254 Sum_probs=36.1
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCC
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTED 52 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~ 52 (91)
.+.+.+++||++.||+|+.+.+.|.++. ++++++++.....
T Consensus 81 g~~~~l~~Gd~i~ip~~~~H~~~n~g~~---~~~~l~i~~~~~d 121 (156)
T 3kgz_A 81 ETISDVAQGDLVFIPPMTWHQFRANRGD---CLGFLCVVNAARD 121 (156)
T ss_dssp TEEEEEETTCEEEECTTCCEEEECCSSS---CEEEEEEEESSCC
T ss_pred CEEEEeCCCCEEEECCCCcEEeEeCCCC---CEEEEEEEeCCCC
Confidence 3588999999999999999999999875 8999999877654
No 51
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=97.03 E-value=0.0014 Score=47.25 Aligned_cols=42 Identities=12% Similarity=-0.039 Sum_probs=33.1
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCC
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTED 52 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~ 52 (91)
.+.+.|+.||++.+|+|+.|++.|.++.+ +++++...|+.-+
T Consensus 217 ~~~~~l~~GD~i~~~~~~~H~~~n~g~~~--~~~~l~~~d~~r~ 258 (261)
T 1rc6_A 217 NNWIPVKKGDYIFMGAYSLQAGYGVGRGE--AFSYIYSKDCNRD 258 (261)
T ss_dssp SCEEEEETTCEEEECSSEEEEEEEC------CEEEEEEEECSCC
T ss_pred CEEEEeCCCCEEEECCCCcEEeEeCCCCc--CEEEEEEecCCCC
Confidence 46789999999999999999999998722 8998888775543
No 52
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=97.01 E-value=0.0015 Score=44.97 Aligned_cols=40 Identities=8% Similarity=0.041 Sum_probs=35.3
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCC
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTE 51 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n 51 (91)
.+.+.++.||++.||+|+.|.+.|.++. +++++++.....
T Consensus 90 g~~~~l~~GD~i~ip~g~~H~~~n~~~~---~~~~l~i~~~~~ 129 (166)
T 3jzv_A 90 RAVSAVAPYDLVTIPGWSWHQFRAPADE---ALGFLCMVNAER 129 (166)
T ss_dssp TEEEEECTTCEEEECTTCCEEEECCTTS---CEEEEEEEESSC
T ss_pred CEEEEeCCCCEEEECCCCcEEeEeCCCC---CEEEEEEEccCC
Confidence 3688999999999999999999999875 899999887654
No 53
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=97.01 E-value=0.0013 Score=42.17 Aligned_cols=39 Identities=5% Similarity=0.188 Sum_probs=32.7
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecC
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNT 50 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~ 50 (91)
.+.+.+++||++.+|+|+.+.+.|.+++ +++++.+.-+.
T Consensus 85 ~~~~~l~~Gd~i~ip~g~~H~~~~~~~~---~~~~l~v~~~~ 123 (126)
T 1vj2_A 85 QGEETVEEGFYIFVEPNEIHGFRNDTDS---EVEFLCLIPKE 123 (126)
T ss_dssp SCEEEEETTEEEEECTTCCEEEECCSSS---CEEEEEEEEGG
T ss_pred CEEEEECCCCEEEECCCCcEEeEeCCCC---CEEEEEEEccC
Confidence 3578999999999999999999999765 78887776543
No 54
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=97.00 E-value=0.0018 Score=40.97 Aligned_cols=36 Identities=17% Similarity=0.349 Sum_probs=30.8
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEe
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIF 47 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~ 47 (91)
.+.+.+++||++.||+|+.+.+.|.++. +++.+.+.
T Consensus 71 ~~~~~l~~Gd~~~i~~~~~H~~~~~~~~---~~~~~~i~ 106 (128)
T 4i4a_A 71 DEDFPVTKGDLIIIPLDSEHHVINNNQE---DFHFYTIW 106 (128)
T ss_dssp TEEEEEETTCEEEECTTCCEEEEECSSS---CEEEEEEE
T ss_pred CEEEEECCCcEEEECCCCcEEeEeCCCC---CEEEEEEE
Confidence 4688999999999999999999999765 67776665
No 55
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=96.99 E-value=0.0014 Score=44.49 Aligned_cols=41 Identities=10% Similarity=0.078 Sum_probs=35.8
Q ss_pred ceeeeeccCcEEEeCCC--CeEEEeeCCCCCcccEEEEEEeecCCC
Q 038528 9 IRTLDIRRGDVYRLQPG--SVFYIESNLEQEREKLRIYAIFSNTED 52 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG--~~~y~~N~~~~e~~~L~i~~l~d~~n~ 52 (91)
.+.+.|+.||++.+|+| +.|++.|.++. +++++.+..+...
T Consensus 82 ~~~~~l~~GD~i~ip~~~~~~H~~~n~~~~---~~~~l~v~~p~~~ 124 (163)
T 3i7d_A 82 QGEHPMVPGDCAAFPAGDPNGHQFVNRTDA---PATFLVVGTRTPT 124 (163)
T ss_dssp TEEEEECTTCEEEECTTCCCCBEEECCSSS---CEEEEEEEECCSC
T ss_pred CEEEEeCCCCEEEECCCCCcceEEEECCCC---CEEEEEEECCCCC
Confidence 35789999999999999 99999999875 8999998877654
No 56
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=96.92 E-value=0.0018 Score=43.04 Aligned_cols=37 Identities=19% Similarity=0.343 Sum_probs=32.1
Q ss_pred eeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecC
Q 038528 11 TLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNT 50 (91)
Q Consensus 11 ~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~ 50 (91)
.+.+++||++.+|+|+.+++.|.++. +++++++..+.
T Consensus 88 ~~~l~~Gd~i~ip~~~~H~~~n~~~~---~~~~l~v~~~~ 124 (147)
T 2f4p_A 88 ARILKKGDVVEIPPNVVHWHGAAPDE---ELVHIGISTQV 124 (147)
T ss_dssp CEEEETTCEEEECTTCCEEEEEBTTB---CEEEEEEECCG
T ss_pred EEEECCCCEEEECCCCcEEeEeCCCC---CEEEEEEEccC
Confidence 38999999999999999999999875 78888877653
No 57
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=96.91 E-value=0.0023 Score=43.60 Aligned_cols=35 Identities=6% Similarity=0.001 Sum_probs=30.7
Q ss_pred eeeeeccCcEEEeCCCCeEEEeeC-CCCCcccEEEEEEe
Q 038528 10 RTLDIRRGDVYRLQPGSVFYIESN-LEQEREKLRIYAIF 47 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~~~y~~N~-~~~e~~~L~i~~l~ 47 (91)
+.+.|+.||.+.+|+|+.|++.|. ++. +.+++.++
T Consensus 162 ~~~~l~~GD~~~~~~~~~H~~~n~~~~~---~~~~l~v~ 197 (198)
T 2bnm_A 162 KEALLPTGASMFVEEHVPHAFTAAKGTG---SAKLIAVN 197 (198)
T ss_dssp EEEEECTTCEEEECTTCCEEEEESTTSC---CEEEEEEE
T ss_pred ccEEECCCCEEEeCCCCceEEEecCCCC---CeEEEEEe
Confidence 788999999999999999999998 775 78777654
No 58
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=96.88 E-value=0.0018 Score=50.45 Aligned_cols=39 Identities=10% Similarity=0.009 Sum_probs=34.8
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecC
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNT 50 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~ 50 (91)
-+...+++||++.+|+|+.|.+.|++++ ++++++++|..
T Consensus 141 G~~~~~~~GD~v~iP~g~~H~~~N~gde---~l~~l~v~D~P 179 (368)
T 3nw4_A 141 GDPVRMSRGDLLLTPGWCFHGHMNDTDQ---PMAWIDGLDIP 179 (368)
T ss_dssp TEEEEEETTCEEEECTTCCEEEEECSSS---CEEEEEEECHH
T ss_pred CEEEEEeCCCEEEECCCCcEEeEeCCCC---CeEEEEecchH
Confidence 3688999999999999999999999986 89999988744
No 59
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=96.87 E-value=0.0019 Score=41.09 Aligned_cols=35 Identities=14% Similarity=0.301 Sum_probs=28.7
Q ss_pred eeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEe
Q 038528 10 RTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIF 47 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~ 47 (91)
+.+.|++||.+.+|+|+.|.+.|..+. ++.++.+.
T Consensus 74 ~~~~l~~Gd~i~ip~~~~H~~~~~~~~---~~~~~~v~ 108 (114)
T 3fjs_A 74 AQRRLHQGDLLYLGAGAAHDVNAITNT---SLLVTVVL 108 (114)
T ss_dssp EEEEECTTEEEEECTTCCEEEEESSSE---EEEEEEEC
T ss_pred EEEEECCCCEEEECCCCcEEEEeCCCc---EEEEEEEe
Confidence 578999999999999999999999664 55554444
No 60
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=96.79 E-value=0.0031 Score=45.02 Aligned_cols=40 Identities=18% Similarity=0.178 Sum_probs=34.4
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCC
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTE 51 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n 51 (91)
.+.+.|+.||.+.+|+|+.+.+.|.++. +++++.++.+..
T Consensus 183 ~~~~~l~~Gd~i~ip~~~~H~~~n~~~~---~~~~l~v~~p~~ 222 (243)
T 3h7j_A 183 GCTVEMKFGTAYFCEPREDHGAINRSEK---ESKSINIFFPPR 222 (243)
T ss_dssp TEEEEECTTCEEEECTTCCEEEEECSSS---CEEEEEEEESCS
T ss_pred CEEEEECCCCEEEECCCCcEEeEeCCCC---CEEEEEEEcCCh
Confidence 3578899999999999999999999876 788888887543
No 61
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=96.77 E-value=0.0025 Score=41.44 Aligned_cols=38 Identities=16% Similarity=0.098 Sum_probs=29.6
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecC
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNT 50 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~ 50 (91)
.+.+.|+.||++.||+|+.|++.|.++ ..+++.+..|.
T Consensus 76 g~~~~l~~GD~v~ip~g~~H~~~~~~~----~~~~l~v~~P~ 113 (119)
T 3lwc_A 76 GETVTAGPGEIVYMPKGETVTIRSHEE----GALTAYVTYPH 113 (119)
T ss_dssp TEEEEECTTCEEEECTTCEEEEEEEEE----EEEEEEEEECC
T ss_pred CEEEEECCCCEEEECCCCEEEEEcCCC----CeEEEEEECCC
Confidence 467899999999999999999887742 56666665543
No 62
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=96.76 E-value=0.0017 Score=45.60 Aligned_cols=40 Identities=18% Similarity=0.256 Sum_probs=35.1
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCC
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTED 52 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~ 52 (91)
.+.+.|++||.+ +|+|+.|.+.|.++. +++++.++.+...
T Consensus 117 ge~~~L~~GDsi-~~~g~~H~~~N~g~~---~ar~l~V~~P~~p 156 (172)
T 3es1_A 117 GAKRTVRQGGII-VQRGTNHLWRNTTDK---PCRIAFILIEAPA 156 (172)
T ss_dssp GCEEEECTTCEE-EECSCCBEEECCSSS---CEEEEEEEEECCC
T ss_pred CeEEEECCCCEE-EeCCCcEEEEeCCCC---CEEEEEEEcCCCc
Confidence 357889999999 999999999999876 8999998877664
No 63
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=96.76 E-value=0.0035 Score=39.53 Aligned_cols=37 Identities=22% Similarity=0.242 Sum_probs=30.8
Q ss_pred eeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecC
Q 038528 10 RTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNT 50 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~ 50 (91)
+.+.++.||++.+|+|+.|.+.|.++ +.+++.++.+.
T Consensus 79 ~~~~l~~Gd~~~ip~~~~H~~~~~~~----~~~~l~v~~p~ 115 (126)
T 4e2g_A 79 ETRVLRPGMAYTIPGGVRHRARTFED----GCLVLDIFSPP 115 (126)
T ss_dssp EEEEECTTEEEEECTTCCEEEECCTT----CEEEEEEEESC
T ss_pred EEEEeCCCCEEEECCCCcEEeEECCC----CEEEEEEECCC
Confidence 57899999999999999999999965 46677766553
No 64
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=96.73 E-value=0.0024 Score=40.90 Aligned_cols=37 Identities=16% Similarity=0.172 Sum_probs=30.5
Q ss_pred eeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecC
Q 038528 10 RTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNT 50 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~ 50 (91)
+.+.++.||++.+|+|+.|++.|.++ .++++.++.+.
T Consensus 83 ~~~~l~~Gd~~~ip~g~~H~~~~~~~----~~~~l~~~~p~ 119 (134)
T 2o8q_A 83 GAVMLEAGGSAFQPPGVRHRELRHSD----DLEVLEIVSPA 119 (134)
T ss_dssp EEEEEETTCEEECCTTCCEEEEEECT----TCEEEEEESST
T ss_pred EEEEecCCCEEEECCCCcEEeEeCCC----CeEEEEEECCC
Confidence 78999999999999999999999765 35666666554
No 65
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=96.69 E-value=0.0038 Score=45.37 Aligned_cols=39 Identities=10% Similarity=-0.107 Sum_probs=33.0
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeec
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSN 49 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~ 49 (91)
.+.+.|+.||++.+|+|+.|++.|.++.+ +++++...+.
T Consensus 220 ~~~~~l~~GD~i~i~~~~~H~~~n~~~~~--~~~~l~~~~~ 258 (274)
T 1sef_A 220 NEWYPVEKGDYIFMSAYVPQAAYAVGREE--PLMYVYSKDA 258 (274)
T ss_dssp TEEEEEETTCEEEECTTCCEEEEEECSSS--CEEEEEEEEC
T ss_pred CEEEEECCCCEEEECCCCCEEEEeCCCCC--CEEEEEEEcC
Confidence 36789999999999999999999998722 7888877654
No 66
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=96.67 E-value=0.0043 Score=44.59 Aligned_cols=42 Identities=5% Similarity=-0.024 Sum_probs=36.1
Q ss_pred CceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCC
Q 038528 8 DIRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTED 52 (91)
Q Consensus 8 ~~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~ 52 (91)
+.+.+.|+.||.+.+++|..|+++|.++. +++.+..-|.+-.
T Consensus 202 ~~~~~~l~~GD~~~~~~~~pH~~~n~g~~---~~~yl~~kd~~r~ 243 (246)
T 1sfn_A 202 EENYYPVTAGDIIWMGAHCPQWYGALGRN---WSKYLLYKDMNRH 243 (246)
T ss_dssp TTEEEEEETTCEEEECTTCCEEEEEESSS---CEEEEEEEECSSC
T ss_pred CCEEEEcCCCCEEEECCCCCEEEEcCCCC---CEEEEEEEecccC
Confidence 35778999999999999999999999986 8988877776644
No 67
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=96.65 E-value=0.0028 Score=48.28 Aligned_cols=38 Identities=5% Similarity=-0.109 Sum_probs=33.4
Q ss_pred eeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecC
Q 038528 10 RTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNT 50 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~ 50 (91)
+.+.+++||++.+|+|+.|++.|.+++ +++++.+.+..
T Consensus 139 ~~~~l~~GD~~~iP~g~~H~~~n~~~~---~~~~l~v~d~p 176 (354)
T 2d40_A 139 ERTPMNEGDFILTPQWRWHDHGNPGDE---PVIWLDGLDLP 176 (354)
T ss_dssp EEEECCTTCEEEECTTSCEEEECCSSS---CEEEEEEECHH
T ss_pred EEEEEcCCCEEEECCCCcEEeEeCCCC---CEEEEEEECch
Confidence 578999999999999999999999875 79988887643
No 68
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=96.64 E-value=0.0037 Score=42.49 Aligned_cols=38 Identities=11% Similarity=0.122 Sum_probs=31.3
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecC
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNT 50 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~ 50 (91)
.+.+.|++||.+.+|+|+.|++.|.++. +. ++.++.+.
T Consensus 143 ~~~~~l~~GD~i~i~~~~~H~~~n~~~~---~~-~l~v~~~~ 180 (192)
T 1y9q_A 143 EQWHELQQGEHIRFFSDQPHGYAAVTEK---AV-FQNIVAYP 180 (192)
T ss_dssp TEEEEECTTCEEEEECSSSEEEEESSSC---EE-EEEEEECC
T ss_pred CEEEEeCCCCEEEEcCCCCeEeECCCCC---cE-EEEEEecC
Confidence 4678999999999999999999999875 67 66665443
No 69
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=96.60 E-value=0.004 Score=45.43 Aligned_cols=34 Identities=6% Similarity=0.073 Sum_probs=29.8
Q ss_pred eeeeccCcEEEeCCCCeEEEeeCCCCCcccEEE-EEEe
Q 038528 11 TLDIRRGDVYRLQPGSVFYIESNLEQEREKLRI-YAIF 47 (91)
Q Consensus 11 ~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i-~~l~ 47 (91)
.+.++.||++.+|+|++|++.|.++. ++++ +.++
T Consensus 103 ~~~l~~GD~i~iP~g~~H~~~N~~~~---~~~~~l~~~ 137 (239)
T 2xlg_A 103 SIQSEPKQLIYSPNHYMHGFVNPTDK---TLPIVFVWM 137 (239)
T ss_dssp EEECCTTEEEEECTTEEEEEECCSSS---CEEEEEEEE
T ss_pred EEEECCCCEEEECCCCCEEEEeCCCC---CEEEEEEEE
Confidence 88999999999999999999999875 6777 5555
No 70
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=96.58 E-value=0.0035 Score=46.10 Aligned_cols=43 Identities=12% Similarity=0.007 Sum_probs=38.3
Q ss_pred CceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCCC
Q 038528 8 DIRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDD 53 (91)
Q Consensus 8 ~~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~~ 53 (91)
+.+.+.|+.||++.+++|..++++|.++. +|+.+.+.|.+-.+
T Consensus 228 ~~~~~~v~~GD~~~~~~~~~h~~~n~g~~---~~~yl~~~d~nr~~ 270 (278)
T 1sq4_A 228 NQDWVEVEAGDFMWLRAFCPQACYSGGPG---RFRYLLYKDVNRHM 270 (278)
T ss_dssp TTEEEEEETTCEEEEEESCCEEEECCSSS---CEEEEEEEECSSCC
T ss_pred CCEEEEeCCCCEEEECCCCCEEEEcCCCC---CEEEEEEEEcCCCc
Confidence 46789999999999999999999999985 89999999887653
No 71
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=96.56 E-value=0.0041 Score=48.65 Aligned_cols=38 Identities=5% Similarity=-0.120 Sum_probs=33.7
Q ss_pred ceeeeeccCcEEEeCCCCeEEEee-CCCCCcccEEEEEEeec
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIES-NLEQEREKLRIYAIFSN 49 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N-~~~~e~~~L~i~~l~d~ 49 (91)
.+.+.+++||++.+|+|..|.+.| .+++ +|++++++|.
T Consensus 161 G~~~~~~~GD~i~~P~g~~H~~~N~~gde---~l~~l~v~d~ 199 (394)
T 3bu7_A 161 GHKVELGANDFVLTPNGTWHEHGILESGT---ECIWQDGLDI 199 (394)
T ss_dssp TEEEEECTTCEEEECTTCCEEEEECTTCC---CEEEEEEECH
T ss_pred CEEEEEcCCCEEEECcCCCEEEEcCCCCC---CEEEEEcccc
Confidence 457899999999999999999999 8875 8999997763
No 72
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=96.56 E-value=0.0051 Score=38.05 Aligned_cols=27 Identities=11% Similarity=0.103 Sum_probs=24.2
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCC
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLE 35 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~ 35 (91)
.+.+.+++||++.+|+|+.|.+.|.++
T Consensus 77 ~~~~~l~~Gd~~~ip~~~~H~~~~~~~ 103 (115)
T 1yhf_A 77 QETYRVAEGQTIVMPAGIPHALYAVEA 103 (115)
T ss_dssp TEEEEEETTCEEEECTTSCEEEEESSC
T ss_pred CEEEEECCCCEEEECCCCCEEEEECCC
Confidence 357899999999999999999999864
No 73
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=96.47 E-value=0.0058 Score=46.24 Aligned_cols=39 Identities=8% Similarity=0.038 Sum_probs=32.2
Q ss_pred CceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecC
Q 038528 8 DIRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNT 50 (91)
Q Consensus 8 ~~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~ 50 (91)
.++.+.|+.||.+.+|+|++|++.|.++. . +++.++.+.
T Consensus 92 ~~~~~~L~~GD~v~ip~g~~H~~~n~~~~---~-~~l~v~~p~ 130 (350)
T 1juh_A 92 TQQTRVLSSGDYGSVPRNVTHTFQIQDPD---T-EMTGVIVPG 130 (350)
T ss_dssp CCEEEEEETTCEEEECTTEEEEEEECSTT---E-EEEEEEESS
T ss_pred ceEEEEECCCCEEEECCCCcEEEEeCCCC---C-EEEEEEcCc
Confidence 45799999999999999999999999764 4 666666554
No 74
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=96.43 E-value=0.0073 Score=43.16 Aligned_cols=38 Identities=13% Similarity=0.318 Sum_probs=31.4
Q ss_pred eeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCC
Q 038528 11 TLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTE 51 (91)
Q Consensus 11 ~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n 51 (91)
...++.||++.||+|+.+|..+..+. .+..+.++....
T Consensus 128 ~i~v~~GDlIiIPaG~~H~f~~~~~~---~~~airlF~~~~ 165 (191)
T 1vr3_A 128 RISMEKGDMITLPAGIYHRFTLDEKN---YVKAMRLFVGEP 165 (191)
T ss_dssp EEEEETTEEEEECTTCCEEEEECTTC---CEEEEEEESSSC
T ss_pred EEEECCCCEEEECcCCcCCcccCCCC---CEEEEEEECCCC
Confidence 46889999999999999999987654 788888886553
No 75
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=96.36 E-value=0.0081 Score=43.70 Aligned_cols=37 Identities=8% Similarity=0.235 Sum_probs=31.4
Q ss_pred eeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecC
Q 038528 10 RTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNT 50 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~ 50 (91)
+.+.|+.||++.+|+|+.|++.|.++ +++++.++.+.
T Consensus 257 ~~~~l~~GD~~~ip~~~~H~~~n~~~----~~~~l~v~~~~ 293 (337)
T 1y3t_A 257 QEIQLNPGDFLHVPANTVHSYRLDSH----YTKMVGVLVPG 293 (337)
T ss_dssp EEEEECTTCEEEECTTCCEEEEECSS----SEEEEEEEESS
T ss_pred EEEEECCCCEEEECCCCeEEEEECCC----CeEEEEEEcCc
Confidence 67899999999999999999999975 47777776544
No 76
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=96.35 E-value=0.0072 Score=36.78 Aligned_cols=27 Identities=11% Similarity=0.054 Sum_probs=24.3
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCC
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLE 35 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~ 35 (91)
.+.+.|+.||++.+|+|+.|++.|.++
T Consensus 73 ~~~~~l~~Gd~~~ip~~~~H~~~~~~~ 99 (110)
T 2q30_A 73 DAVIPAPRGAVLVAPISTPHGVRAVTD 99 (110)
T ss_dssp GCEEEECTTEEEEEETTSCEEEEESSS
T ss_pred CEEEEECCCCEEEeCCCCcEEEEEcCC
Confidence 357899999999999999999999864
No 77
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=96.30 E-value=0.0091 Score=41.07 Aligned_cols=40 Identities=13% Similarity=0.107 Sum_probs=33.8
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCCC
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTEDD 53 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~~ 53 (91)
-+.+.++.||.+.||+|+.+.+.|. . +.+++.+..|.+.+
T Consensus 101 g~~~~l~~GD~i~iP~G~~h~~~n~--~---~a~~l~V~~P~~~~ 140 (151)
T 4axo_A 101 GRKVSASSGELIFIPKGSKIQFSVP--D---YARFIYVTYPADWA 140 (151)
T ss_dssp TEEEEEETTCEEEECTTCEEEEEEE--E---EEEEEEEEECSCC-
T ss_pred CEEEEEcCCCEEEECCCCEEEEEeC--C---CEEEEEEECCCCcc
Confidence 3689999999999999999999997 3 68888888877654
No 78
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=96.26 E-value=0.014 Score=36.09 Aligned_cols=37 Identities=14% Similarity=-0.001 Sum_probs=29.4
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecC
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNT 50 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~ 50 (91)
.+.+.++.||++.+|+|+.|.+.|.++ .+++.++.+.
T Consensus 71 ~~~~~l~~Gd~~~ip~~~~H~~~~~~~-----~~~l~v~~p~ 107 (116)
T 2pfw_A 71 GVIKVLTAGDSFFVPPHVDHGAVCPTG-----GILIDTFSPA 107 (116)
T ss_dssp TEEEEECTTCEEEECTTCCEEEEESSC-----EEEEEEEESC
T ss_pred CEEEEeCCCCEEEECcCCceeeEeCCC-----cEEEEEECCc
Confidence 357899999999999999999999853 4556665443
No 79
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=96.18 E-value=0.0039 Score=43.88 Aligned_cols=37 Identities=14% Similarity=0.271 Sum_probs=30.0
Q ss_pred eeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecC
Q 038528 11 TLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNT 50 (91)
Q Consensus 11 ~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~ 50 (91)
...++.||++.||+|+.||..+..+. .+..+.++.+.
T Consensus 123 ~~~l~~GDli~IP~g~~H~~~~~~~~---~~~~ir~F~~~ 159 (179)
T 1zrr_A 123 QVLCEKNDLISVPAHTPHWFDMGSEP---NFTAIRIFDNP 159 (179)
T ss_dssp EEECCCSCEEEECTTCCBCCCCSSCS---SCEEEEEECCG
T ss_pred EEEECCCCEEEECCCCeEeeecCCCc---eEEEEEeccCC
Confidence 35699999999999999999887554 68877777554
No 80
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=95.93 E-value=0.0058 Score=36.74 Aligned_cols=25 Identities=12% Similarity=0.311 Sum_probs=23.1
Q ss_pred eeeeeccCcEEEeCCCCeEEEeeCC
Q 038528 10 RTLDIRRGDVYRLQPGSVFYIESNL 34 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~~~y~~N~~ 34 (91)
+.+.+++||++.+|+|+.|.+.|.+
T Consensus 68 ~~~~l~~Gd~~~ip~~~~H~~~~~~ 92 (102)
T 3d82_A 68 QNITLQAGEMYVIPKGVEHKPMAKE 92 (102)
T ss_dssp CEEEEETTEEEEECTTCCBEEEEEE
T ss_pred EEEEEcCCCEEEECCCCeEeeEcCC
Confidence 5789999999999999999999984
No 81
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=95.86 E-value=0.0087 Score=37.20 Aligned_cols=34 Identities=15% Similarity=0.242 Sum_probs=27.3
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEe
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIF 47 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~ 47 (91)
.+.+.|++||.+.+|+|+.|.+.|.. +.+++.+.
T Consensus 75 ~~~~~l~~Gd~i~i~~~~~H~~~~~~-----~~~~~~i~ 108 (114)
T 2ozj_A 75 DQKIDLVPEDVLMVPAHKIHAIAGKG-----RFKMLQIT 108 (114)
T ss_dssp TEEEEECTTCEEEECTTCCBEEEEEE-----EEEEEEEE
T ss_pred CEEEEecCCCEEEECCCCcEEEEeCC-----CcEEEEEE
Confidence 36789999999999999999999972 45555443
No 82
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=95.82 E-value=0.014 Score=42.84 Aligned_cols=37 Identities=16% Similarity=0.249 Sum_probs=32.1
Q ss_pred eeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeec
Q 038528 10 RTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSN 49 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~ 49 (91)
+.+.|+.||.+.+|+|+.|.+.|.++. +++++.+...
T Consensus 108 ~~~~L~~GD~i~ip~~~~H~~~N~g~~---~~~~l~v~~~ 144 (278)
T 1sq4_A 108 QVHAMQPGGYAFIPPGADYKVRNTTGQ---HTRFHWIRKH 144 (278)
T ss_dssp CEEEECTTEEEEECTTCCEEEECCSSS---CEEEEEEEEE
T ss_pred EEEEECCCCEEEECCCCcEEEEECCCC---CEEEEEEEec
Confidence 578999999999999999999999875 7888777643
No 83
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=95.81 E-value=0.017 Score=45.15 Aligned_cols=40 Identities=8% Similarity=0.088 Sum_probs=33.9
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecC
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNT 50 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~ 50 (91)
.+.+.+++||++.+|+|+.|.+.|.+.++ +++++++.|..
T Consensus 331 ge~~~~~~GD~~~iP~g~~H~~~N~g~~e--~~~ll~i~D~P 370 (394)
T 3bu7_A 331 GKRFDWSEHDIFCVPAWTWHEHCNTQERD--DACLFSFNDFP 370 (394)
T ss_dssp TEEEEECTTCEEEECTTCCEEEEECCSSC--CEEEEEEESHH
T ss_pred CEEEEEeCCCEEEECCCCeEEeEeCCCCC--CeEEEEeeCHH
Confidence 46899999999999999999999997332 89999887643
No 84
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=95.78 E-value=0.026 Score=39.40 Aligned_cols=35 Identities=6% Similarity=0.213 Sum_probs=29.7
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEE
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAI 46 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l 46 (91)
.+.+.|+.||.+.+|+|..|.+.|.++. +.+++.+
T Consensus 127 g~~~~L~~Gds~~iP~g~~H~~~N~~d~---~Arll~V 161 (166)
T 2vpv_A 127 KNKFLSVKGSTFQIPAFNEYAIANRGND---EAKMFFV 161 (166)
T ss_dssp TEEEEEETTCEEEECTTCEEEEEECSSS---CEEEEEE
T ss_pred CEEEEEcCCCEEEECCCCCEEEEECCCC---CEEEEEE
Confidence 4688999999999999999999999886 5665544
No 85
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=95.78 E-value=0.022 Score=41.39 Aligned_cols=38 Identities=11% Similarity=0.081 Sum_probs=31.5
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecC
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNT 50 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~ 50 (91)
.+.+.|++||.+.+|+|+.|.+.|.++ +.+++.++.+.
T Consensus 84 ~~~~~l~~Gd~~~~p~~~~H~~~n~~~----~~~~~~~~~p~ 121 (337)
T 1y3t_A 84 GERYLLISGDYANIPAGTPHSYRMQSH----RTRLVSYTMKG 121 (337)
T ss_dssp TEEEEECTTCEEEECTTCCEEEEECST----TEEEEEEEETT
T ss_pred CEEEEECCCCEEEECCCCcEEEEECCC----CeEEEEEECCC
Confidence 457899999999999999999999965 46777766554
No 86
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=95.76 E-value=0.021 Score=37.76 Aligned_cols=37 Identities=19% Similarity=0.195 Sum_probs=30.0
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecC
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNT 50 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~ 50 (91)
-+.+.|+.||.+.+|+|+.+.+.|. . +++++.++.+.
T Consensus 92 g~~~~l~~GD~i~~p~g~~h~~~~~--~---~~~~l~v~~p~ 128 (133)
T 2pyt_A 92 GETMIAKAGDVMFIPKGSSIEFGTP--T---SVRFLYVAWPA 128 (133)
T ss_dssp TEEEEEETTCEEEECTTCEEEEEEE--E---EEEEEEEEEST
T ss_pred CEEEEECCCcEEEECCCCEEEEEeC--C---CEEEEEEEcCC
Confidence 4678999999999999999888874 2 67877776554
No 87
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=95.70 E-value=0.01 Score=37.64 Aligned_cols=27 Identities=15% Similarity=0.095 Sum_probs=24.3
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCC
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLE 35 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~ 35 (91)
.+.+.|++||++.+|+|+.+.+.|.++
T Consensus 67 g~~~~l~~GD~i~ip~g~~H~~~n~~~ 93 (101)
T 1o5u_A 67 GKKYVIEKGDLVTFPKGLRCRWKVLEP 93 (101)
T ss_dssp CCEEEEETTCEEEECTTCEEEEEEEEE
T ss_pred CCEEEECCCCEEEECCCCcEEEEeCCC
Confidence 467899999999999999999999854
No 88
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=95.66 E-value=0.027 Score=41.90 Aligned_cols=40 Identities=13% Similarity=0.043 Sum_probs=32.6
Q ss_pred CceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecC
Q 038528 8 DIRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNT 50 (91)
Q Consensus 8 ~~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~ 50 (91)
+.+.+.++.||++-+|++..+|++|.|++ +++-+--=|.+
T Consensus 223 ~~~~~~V~~GD~i~~~~~~~h~~~n~G~e---~~~yl~ykd~n 262 (266)
T 4e2q_A 223 GDNWYPVQAGDVIWMAPFVPQWYAALGKT---RSRYLLYKDVN 262 (266)
T ss_dssp TTEEEEEETTCEEEECTTCCEEEEEESSS---CEEEEEEEECS
T ss_pred CCEEEEecCCCEEEECCCCcEEEEeCCCC---CEEEEEEcccc
Confidence 45788999999999999999999999985 78755444443
No 89
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=95.64 E-value=0.011 Score=36.47 Aligned_cols=24 Identities=17% Similarity=0.245 Sum_probs=22.6
Q ss_pred eeeeeccCcEEEeCCCCeEEEeeC
Q 038528 10 RTLDIRRGDVYRLQPGSVFYIESN 33 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~~~y~~N~ 33 (91)
+.+.++.||++.+|+|+.|.+.|.
T Consensus 67 ~~~~l~~Gd~~~ip~~~~H~~~~~ 90 (107)
T 2i45_A 67 GSMTIREGEMAVVPKSVSHRPRSE 90 (107)
T ss_dssp CEEEECTTEEEEECTTCCEEEEEE
T ss_pred cEEEECCCCEEEECCCCcEeeEeC
Confidence 678999999999999999999995
No 90
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=95.60 E-value=0.019 Score=41.18 Aligned_cols=38 Identities=16% Similarity=0.257 Sum_probs=32.4
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeec
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSN 49 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~ 49 (91)
.+.+.|+.||.+.+|+|+.|.+.|.++. +++++.+...
T Consensus 98 ~~~~~L~~Gd~~~~~~~~~H~~~N~~~~---~~~~l~v~~~ 135 (261)
T 1rc6_A 98 GKTFALSEGGYLYCPPGSLMTFVNAQAE---DSQIFLYKRR 135 (261)
T ss_dssp TEEEEEETTEEEEECTTCCCEEEECSSS---CEEEEEEEEE
T ss_pred CEEEEECCCCEEEECCCCCEEEEeCCCC---CEEEEEEEec
Confidence 4578999999999999999999999875 7877777643
No 91
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=95.53 E-value=0.034 Score=38.64 Aligned_cols=37 Identities=16% Similarity=0.060 Sum_probs=31.8
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCC
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTED 52 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~ 52 (91)
-+.+.|+.||++.||+|+.|++.+ +++++++..|.-.
T Consensus 85 ge~~~l~~GD~v~IPpg~~H~i~g-------~l~~L~I~~Pp~~ 121 (157)
T 4h7l_A 85 GQSYPLTKLLAISIPPLVRHRIVG-------EATIINIVSPPFD 121 (157)
T ss_dssp TEEEECCTTEEEEECTTCCEEEES-------CEEEEEEEESSCC
T ss_pred CEEEEeCCCCEEEECCCCeEeeEC-------CEEEEEEECCCCC
Confidence 357899999999999999999972 4999998887755
No 92
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=95.52 E-value=0.018 Score=43.77 Aligned_cols=36 Identities=8% Similarity=0.158 Sum_probs=31.0
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeec
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSN 49 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~ 49 (91)
.+.+.++.||++.||+++.+++.|+ + +++++++.|.
T Consensus 305 ~~~~~~~~GD~~~vP~~~~H~~~n~--e---~~~l~~~~d~ 340 (354)
T 2d40_A 305 NETFSFSAKDIFVVPTWHGVSFQTT--Q---DSVLFSFSDR 340 (354)
T ss_dssp TEEEEEETTCEEEECTTCCEEEEEE--E---EEEEEEEESH
T ss_pred CEEEEEcCCCEEEECCCCeEEEEeC--C---CEEEEEEcCH
Confidence 3789999999999999999999994 2 7888888654
No 93
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=95.41 E-value=0.023 Score=40.15 Aligned_cols=27 Identities=11% Similarity=0.176 Sum_probs=23.8
Q ss_pred ceeeeeccCcEEEeCCCCeEEEee-CCC
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIES-NLE 35 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N-~~~ 35 (91)
.+.+.++.||.+.+|+|+.|++.| .++
T Consensus 190 g~~~~l~~Gd~i~ip~~~~H~~~~~~~~ 217 (227)
T 3rns_A 190 GKPFIVKKGESAVLPANIPHAVEAETEN 217 (227)
T ss_dssp TEEEEEETTEEEEECTTSCEEEECCSSC
T ss_pred CEEEEECCCCEEEECCCCcEEEEeCCCC
Confidence 357899999999999999999999 543
No 94
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=95.33 E-value=0.049 Score=34.96 Aligned_cols=37 Identities=19% Similarity=0.248 Sum_probs=28.0
Q ss_pred CceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEE
Q 038528 8 DIRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAI 46 (91)
Q Consensus 8 ~~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l 46 (91)
+.+.+.+++||++.||+|++|...+.++++ +...+.+
T Consensus 54 ~~~~~~l~~Gd~~~i~p~~~H~~~~~~~~~--~~~~~~i 90 (164)
T 2arc_A 54 QGREFVCRPGDILLFPPGEIHHYGRHPEAR--EWYHQWV 90 (164)
T ss_dssp TTEEEEECTTCEEEECTTCCEEEEECTTSS--EEEEEEE
T ss_pred CCEEEEecCCeEEEEcCCCCEEEEeCCCCC--cEEEEEE
Confidence 357899999999999999999988875322 4444443
No 95
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=95.11 E-value=0.031 Score=40.46 Aligned_cols=38 Identities=13% Similarity=0.259 Sum_probs=31.8
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeec
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSN 49 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~ 49 (91)
.+.+.|++||.+.+|+|+.+.+.|.++. +++++.+...
T Consensus 101 ~~~~~L~~GD~~~~~~~~~H~~~N~~~~---~~~~l~v~~~ 138 (274)
T 1sef_A 101 QETHELEAGGYAYFTPEMKMYLANAQEA---DTEVFLYKKR 138 (274)
T ss_dssp SCEEEEETTEEEEECTTSCCEEEESSSS---CEEEEEEEEE
T ss_pred CEEEEECCCCEEEECCCCCEEEEeCCCC---CEEEEEEEee
Confidence 3578999999999999999999999875 6777766633
No 96
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=95.04 E-value=0.029 Score=36.77 Aligned_cols=31 Identities=16% Similarity=0.187 Sum_probs=25.8
Q ss_pred cCCCceeeeeccCcEEEeCCCCeEEEeeCCC
Q 038528 5 DEDDIRTLDIRRGDVYRLQPGSVFYIESNLE 35 (91)
Q Consensus 5 ~~~~~~~~~lr~GDv~~ipaG~~~y~~N~~~ 35 (91)
..++.+...|+.||.+.+|+|+.+-+.|..+
T Consensus 82 ~~~~g~~~~l~~GD~~~ip~g~~h~~~~~~~ 112 (123)
T 3bcw_A 82 VDPDGTVHAVKAGDAFIMPEGYTGRWEVDRH 112 (123)
T ss_dssp ECTTCCEEEEETTCEEEECTTCCCEEEEEEE
T ss_pred EECCCeEEEECCCCEEEECCCCeEEEEECCc
Confidence 3334567899999999999999999999854
No 97
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=94.69 E-value=0.058 Score=40.68 Aligned_cols=37 Identities=22% Similarity=0.203 Sum_probs=29.2
Q ss_pred CceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEee
Q 038528 8 DIRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFS 48 (91)
Q Consensus 8 ~~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d 48 (91)
+++.+.|+.||++.||||++|-+.|..+ ..+++.+..
T Consensus 289 g~~~~~l~~Gd~~~iPag~~h~~~~~~~----~~~~l~~~~ 325 (350)
T 1juh_A 289 DYAATELGSGDVAFIPGGVEFKYYSEAY----FSKVLFVSS 325 (350)
T ss_dssp TSCCEEECTTCEEEECTTCCEEEEESSS----SEEEEEEEE
T ss_pred CeEEEEeCCCCEEEECCCCCEEEEecCC----eEEEEEEec
Confidence 4468899999999999999999999854 355555443
No 98
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=93.64 E-value=0.16 Score=35.96 Aligned_cols=39 Identities=10% Similarity=-0.078 Sum_probs=32.0
Q ss_pred ceeeeeccCcEE-EeCCCCeEEEeeCCCCCcccEEEEEEeecC
Q 038528 9 IRTLDIRRGDVY-RLQPGSVFYIESNLEQEREKLRIYAIFSNT 50 (91)
Q Consensus 9 ~~~~~lr~GDv~-~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~ 50 (91)
.+.+.|+.||.+ .+|+|+.+.+.|.++. +.+++.+....
T Consensus 71 ~~~~~l~~Gd~i~~ip~~~~H~~~n~~~~---~~~~l~i~r~~ 110 (243)
T 3h7j_A 71 DVTRKMTALESAYIAPPHVPHGARNDTDQ---EVIAIDIKRLK 110 (243)
T ss_dssp TEEEEEETTTCEEEECTTCCEEEEECSSS---CEEEEEEEECC
T ss_pred CEEEEECCCCEEEEcCCCCcEeeEeCCCC---cEEEEEEeccC
Confidence 357889999988 5999999999999875 67777776544
No 99
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=93.39 E-value=0.15 Score=37.21 Aligned_cols=41 Identities=15% Similarity=0.179 Sum_probs=33.6
Q ss_pred CCceeeeecc-C---cEEEeCCCCeEEEeeCCCCCcccEEEEEEeecC
Q 038528 7 DDIRTLDIRR-G---DVYRLQPGSVFYIESNLEQEREKLRIYAIFSNT 50 (91)
Q Consensus 7 ~~~~~~~lr~-G---Dv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~ 50 (91)
...+.+.++. | |++.||+|.+|.+.|.+++ +++++.+.+..
T Consensus 312 ~~~~~~~~~~~~~~~~~~~ip~g~~h~~~n~~~~---~~~~~~~~~~~ 356 (369)
T 3st7_A 312 NDDEIIEYYVSGDKLEVVDIPVGYTHNIENLGDT---DMVTIMWVNEM 356 (369)
T ss_dssp TCCCCEEEEEETTBCCEEEECTTEEEEEEECSSS---CEEEEEEESSC
T ss_pred CCCcEEEEEecCCcceEEEeCCCceEEeEEcCCC---cEEEEEecCcc
Confidence 3456677766 7 9999999999999999875 79988888655
No 100
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=92.81 E-value=0.17 Score=35.54 Aligned_cols=32 Identities=22% Similarity=0.388 Sum_probs=26.3
Q ss_pred eeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEE
Q 038528 10 RTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAI 46 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l 46 (91)
+.+.|+.||.+.+|||+.|.+.|.. +.+++.+
T Consensus 75 ~~~~l~~Gd~~~~p~~~~H~~~a~~-----~~~~l~i 106 (227)
T 3rns_A 75 NKKTISNGDFLEITANHNYSIEARD-----NLKLIEI 106 (227)
T ss_dssp CEEEEETTEEEEECSSCCEEEEESS-----SEEEEEE
T ss_pred EEEEECCCCEEEECCCCCEEEEECC-----CcEEEEE
Confidence 4689999999999999999999974 3555544
No 101
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=92.42 E-value=0.21 Score=35.38 Aligned_cols=28 Identities=18% Similarity=0.293 Sum_probs=23.9
Q ss_pred CCceeeeeccCcEEEeCCCCeEEEeeCC
Q 038528 7 DDIRTLDIRRGDVYRLQPGSVFYIESNL 34 (91)
Q Consensus 7 ~~~~~~~lr~GDv~~ipaG~~~y~~N~~ 34 (91)
++.+...|++||++.+|+|+.|.-.-.+
T Consensus 74 g~~~~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 74 GRRERADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp TEEEEEEECTTCEEEECTTCCEEEEBCC
T ss_pred CceeeEEECCCCEEEeCCCCCcCccccC
Confidence 3467899999999999999999886554
No 102
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=92.01 E-value=0.13 Score=35.10 Aligned_cols=25 Identities=8% Similarity=0.066 Sum_probs=22.3
Q ss_pred eeeeccCcEEEeCCCCeEEEeeCCC
Q 038528 11 TLDIRRGDVYRLQPGSVFYIESNLE 35 (91)
Q Consensus 11 ~~~lr~GDv~~ipaG~~~y~~N~~~ 35 (91)
...|+.||++-||+|-.|++.|-++
T Consensus 202 ~~~l~pGD~LyiP~gW~H~V~~l~~ 226 (235)
T 4gjz_A 202 SCILSPGEILFIPVKYWHYVRALDL 226 (235)
T ss_dssp EEEECTTCEEEECTTCEEEEEESSS
T ss_pred EEEECCCCEEEeCCCCcEEEEECCC
Confidence 4568999999999999999999864
No 103
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=91.89 E-value=0.24 Score=34.83 Aligned_cols=38 Identities=16% Similarity=0.445 Sum_probs=28.8
Q ss_pred eeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCC
Q 038528 10 RTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTED 52 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~ 52 (91)
....|+.||.+.||+|+.||+.|- .. . .++.-+.+.|.
T Consensus 119 ~~i~L~pGesvtIppg~~H~f~ag-ee---g-vli~EvSt~~d 156 (175)
T 2y0o_A 119 HEIELEPGGQYTIPPNTKHWFQAG-EE---G-AVVTEMSSTST 156 (175)
T ss_dssp EEEEECTTCEEEECTTCCEEEEEE-EE---E-EEEEEEEECCC
T ss_pred cEEEECCCCEEEECCCCcEEEEeC-CC---C-EEEEEEeCCCC
Confidence 345899999999999999999993 22 3 55566666655
No 104
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=91.68 E-value=0.34 Score=37.57 Aligned_cols=34 Identities=9% Similarity=0.347 Sum_probs=28.4
Q ss_pred eeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEee
Q 038528 10 RTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFS 48 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d 48 (91)
+.+.+++||+++||+++.+.+.|.+ +..++++-|
T Consensus 317 ~~~~w~~gD~fvvP~w~~h~~~n~~-----~a~Lf~~~D 350 (368)
T 3nw4_A 317 ETTKLEKGDMFVVPSWVPWSLQAET-----QFDLFRFSD 350 (368)
T ss_dssp EEEEECTTCEEEECTTCCEEEEESS-----SEEEEEEES
T ss_pred EEEEecCCCEEEECCCCcEEEEeCC-----CEEEEEEeC
Confidence 5789999999999999999999972 566666554
No 105
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=91.07 E-value=0.23 Score=35.43 Aligned_cols=34 Identities=18% Similarity=0.166 Sum_probs=27.5
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEe
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIF 47 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~ 47 (91)
.+.+.|+.||.+.+|+|+.|.+.|. . +.+++.+.
T Consensus 85 ~~~~~l~~Gd~~~~p~~~~H~~~n~--~---~~~~l~v~ 118 (246)
T 1sfn_A 85 GETRTLREYDYVYLPAGEKHMLTAK--T---DARVSVFE 118 (246)
T ss_dssp SCEEEECTTEEEEECTTCCCEEEEE--E---EEEEEEEE
T ss_pred CEEEEECCCCEEEECCCCCEEEEeC--C---CEEEEEEE
Confidence 3578999999999999999999998 2 45555544
No 106
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=88.67 E-value=0.87 Score=32.28 Aligned_cols=27 Identities=19% Similarity=0.122 Sum_probs=22.9
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCC
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLE 35 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~ 35 (91)
.+...|++||++.+|+|+.|.=.=..+
T Consensus 79 ~~dv~i~eGdmfllP~gvpHsP~r~~e 105 (176)
T 1zvf_A 79 FIDIIINEGDSYLLPGNVPHSPVRFAD 105 (176)
T ss_dssp EEEEEECTTEEEEECTTCCEEEEECTT
T ss_pred eeeEEECCCCEEEcCCCCCcCCcccCC
Confidence 578999999999999999998855533
No 107
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=88.38 E-value=0.81 Score=33.28 Aligned_cols=37 Identities=8% Similarity=0.148 Sum_probs=29.0
Q ss_pred CCceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEe
Q 038528 7 DDIRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIF 47 (91)
Q Consensus 7 ~~~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~ 47 (91)
++.+.+.++.||++.+|+|+.|++-+ +++ +|.++-+.
T Consensus 168 ~~g~~~~l~pGd~v~ipsgv~Ha~rt-~de---PllalwvW 204 (217)
T 4b29_A 168 RNAPDLMLEPGQTRFHPANAPHAMTT-LTD---PILTLVLW 204 (217)
T ss_dssp TTSCCEEECTTCEEEECTTCCEEEEC-CSS---CEEEEEEE
T ss_pred CCCCEEecCCCCEEEcCCCCceeEEE-CCc---cEEEEEEE
Confidence 34677889999999999999999975 553 78755444
No 108
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=87.79 E-value=0.49 Score=35.04 Aligned_cols=34 Identities=6% Similarity=-0.025 Sum_probs=27.3
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEe
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIF 47 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~ 47 (91)
.+.+.|++||.+.+|+|..|++.|.. +.+++.+-
T Consensus 108 g~~~~L~~Gds~y~p~~~~H~~~N~~-----~Ar~l~V~ 141 (266)
T 4e2q_A 108 SSSKKLTVDSYAYLPPNFHHSLDCVE-----SATLVVFE 141 (266)
T ss_dssp CCCEEECTTEEEEECTTCCCEEEESS-----CEEEEEEE
T ss_pred CcEEEEcCCCEEEECCCCCEEEEeCC-----CEEEEEEE
Confidence 35789999999999999999999962 45555543
No 109
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=87.45 E-value=1.2 Score=29.20 Aligned_cols=37 Identities=19% Similarity=0.254 Sum_probs=27.1
Q ss_pred CCCceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEe
Q 038528 6 EDDIRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIF 47 (91)
Q Consensus 6 ~~~~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~ 47 (91)
.++.....|+.||++.+|+|...-+--. +.+|=+.++
T Consensus 76 ~ddG~~~~l~aGD~~~~P~G~~gtWev~-----e~vrK~~~~ 112 (116)
T 3es4_A 76 QADADPVKIGPGSIVSIAKGVPSRLEIL-----SSFRKLATV 112 (116)
T ss_dssp ETTCCCEEECTTEEEEECTTCCEEEEEC-----SCEEEEEEE
T ss_pred eCCCeEEEECCCCEEEECCCCeEEEEEe-----EEEeEEEEE
Confidence 4456688999999999999998776554 255555544
No 110
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=86.79 E-value=1 Score=34.16 Aligned_cols=26 Identities=8% Similarity=-0.033 Sum_probs=23.1
Q ss_pred eeeeccCcEEEeCCCCeEEEeeCCCC
Q 038528 11 TLDIRRGDVYRLQPGSVFYIESNLEQ 36 (91)
Q Consensus 11 ~~~lr~GDv~~ipaG~~~y~~N~~~~ 36 (91)
...++.||++.||+|-.|+++|.++.
T Consensus 257 ~~~l~pGd~l~iP~gw~H~v~~~~~s 282 (336)
T 3k2o_A 257 EILQKPGETVFVPGGWWHVVLNLDTT 282 (336)
T ss_dssp EEEECTTCEEEECTTCEEEEEESSCE
T ss_pred EEEECCCCEEEeCCCCcEEEecCCCe
Confidence 45689999999999999999999764
No 111
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=86.01 E-value=0.44 Score=35.55 Aligned_cols=23 Identities=22% Similarity=0.351 Sum_probs=19.8
Q ss_pred ceeeeeccCcEEEeCCCCeEEEe
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIE 31 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~ 31 (91)
.+...++.||.+.||||++|=+.
T Consensus 157 Ln~v~l~pGd~~~ipaGt~HA~~ 179 (300)
T 1zx5_A 157 LNTFETTPYDTFVIRPGIPHAGE 179 (300)
T ss_dssp EEEEECCTTCEEEECTTCCEEEE
T ss_pred hceeECCCCCEEEcCCCCceEcC
Confidence 45678999999999999999754
No 112
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=85.09 E-value=0.51 Score=35.36 Aligned_cols=23 Identities=26% Similarity=0.587 Sum_probs=19.9
Q ss_pred eeeeeccCcEEEeCCCCeEEEee
Q 038528 10 RTLDIRRGDVYRLQPGSVFYIES 32 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~~~y~~N 32 (91)
+...++.||.+.||||++|=+..
T Consensus 158 n~v~l~pGd~~~ipaGt~HA~~~ 180 (319)
T 1qwr_A 158 RRIKIKPGDFYYVPSGTLHALCK 180 (319)
T ss_dssp EEEECCTTCEEEECTTCCEEECS
T ss_pred eEEEcCCCCEEEcCCCCceEecC
Confidence 56789999999999999997643
No 113
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=84.60 E-value=1.5 Score=33.00 Aligned_cols=26 Identities=15% Similarity=0.234 Sum_probs=23.1
Q ss_pred eeeeeccCcEEEeCCCCeEEEeeCCC
Q 038528 10 RTLDIRRGDVYRLQPGSVFYIESNLE 35 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~~~y~~N~~~ 35 (91)
....|+.||++.||+|..||+.+.++
T Consensus 218 ~~~~L~pGD~LyiP~gwwH~v~s~~~ 243 (342)
T 1vrb_A 218 EIVNLTPGTMLYLPRGLWHSTKSDQA 243 (342)
T ss_dssp EEEEECTTCEEEECTTCEEEEECSSC
T ss_pred eEEEECCCcEEEeCCCccEEEEECCC
Confidence 46678999999999999999999853
No 114
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=83.83 E-value=1.4 Score=35.41 Aligned_cols=32 Identities=16% Similarity=0.194 Sum_probs=26.2
Q ss_pred eeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEE
Q 038528 10 RTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRI 43 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i 43 (91)
....|+.||++.||+|..||..+.++.- .+.+
T Consensus 228 ~e~~L~pGDvLYiP~g~~H~~~s~~~~~--Slhl 259 (489)
T 4diq_A 228 LQTVLEPGDLLYFPRGFIHQAECQDGVH--SLHL 259 (489)
T ss_dssp EEEEECTTCEEEECTTCEEEEEBCSSCC--EEEE
T ss_pred eEEEECCCCEEEECCCCceEEEecCCCc--eEEE
Confidence 3678899999999999999999996542 4544
No 115
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=83.74 E-value=1.1 Score=33.53 Aligned_cols=26 Identities=15% Similarity=0.025 Sum_probs=23.1
Q ss_pred eeeeeccCcEEEeCCCCeEEEeeCCC
Q 038528 10 RTLDIRRGDVYRLQPGSVFYIESNLE 35 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~~~y~~N~~~ 35 (91)
....|+.||++.||+|-.|++.|-+.
T Consensus 240 ~~~~L~pGD~LyiP~gWwH~v~~l~~ 265 (338)
T 3al5_A 240 YECSLEAGDVLFIPALWFHNVISEEF 265 (338)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSC
T ss_pred EEEEECCCCEEEECCCCeEEEeeCCC
Confidence 46678999999999999999999954
No 116
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=82.42 E-value=0.62 Score=35.31 Aligned_cols=32 Identities=16% Similarity=0.257 Sum_probs=25.2
Q ss_pred ccCCCceeeeeccCcEEEeCCCCeEEEeeCCC
Q 038528 4 ADEDDIRTLDIRRGDVYRLQPGSVFYIESNLE 35 (91)
Q Consensus 4 v~~~~~~~~~lr~GDv~~ipaG~~~y~~N~~~ 35 (91)
+++++.+...|++||++.+|+|+.|==.=..+
T Consensus 67 ~d~g~~~~V~i~eGemfllP~gv~HsP~r~~e 98 (286)
T 2qnk_A 67 LEQGKHRDVVIRQGEIFLLPARVPHSPQRFAN 98 (286)
T ss_dssp EETTEEEEEEECTTEEEEECTTCCEEEEECTT
T ss_pred EeCCceeeEEECCCeEEEeCCCCCcCCcccCC
Confidence 34455678899999999999999987766543
No 117
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=82.37 E-value=4.6 Score=27.76 Aligned_cols=40 Identities=8% Similarity=0.208 Sum_probs=33.3
Q ss_pred eeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCC
Q 038528 10 RTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTED 52 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~ 52 (91)
+...+.+||++..|+|-++.+.|.++. +.+.+-+.-+...
T Consensus 117 ~~~~l~~G~~~~~~~~~iH~V~N~~~~---~aVSlHvY~pp~~ 156 (171)
T 3eqe_A 117 NSYFVHEGECLISTKGLIHKMSNPTSE---RMVSLHVYSPPLE 156 (171)
T ss_dssp EEEEEETTCEEEECTTCEEEEECCSSS---CEEEEEEEESCCC
T ss_pred ceEEeCCCcEEEeCCCCEEEEECCCCC---CEEEEEEeCCCcc
Confidence 467789999999999999999999874 7877777766654
No 118
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=81.97 E-value=2.2 Score=28.89 Aligned_cols=31 Identities=10% Similarity=0.012 Sum_probs=24.8
Q ss_pred eeeccCcEEEeCCCCeEEEeeC--CCCCcccEEEEE
Q 038528 12 LDIRRGDVYRLQPGSVFYIESN--LEQEREKLRIYA 45 (91)
Q Consensus 12 ~~lr~GDv~~ipaG~~~y~~N~--~~~e~~~L~i~~ 45 (91)
..+++||.++.|+|+.|...+. +++ ..++..
T Consensus 80 ~~~~~Gd~~~~P~g~~H~~~~~~~~~e---~~~~~~ 112 (159)
T 3ebr_A 80 WVAHAGSVVYETASTRHTPQSAYAEGP---DIITFN 112 (159)
T ss_dssp CCBCTTCEEEECSSEEECEEESSSSSS---CEEEEE
T ss_pred eEECCCeEEEECCCCcceeEeCCCCCC---CEEEEE
Confidence 3789999999999999999998 544 455444
No 119
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=81.78 E-value=1.1 Score=35.60 Aligned_cols=27 Identities=7% Similarity=0.232 Sum_probs=23.6
Q ss_pred eeeeeccCcEEEeCCCCeEEEeeCCCC
Q 038528 10 RTLDIRRGDVYRLQPGSVFYIESNLEQ 36 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~~~y~~N~~~~ 36 (91)
..-.++.||++.||+|-.|+++|..+.
T Consensus 301 ~~v~l~pGetlfIPsGWwH~V~nleds 327 (447)
T 3kv4_A 301 YKCSVKQGQTLFIPTGWIHAVLTPVDC 327 (447)
T ss_dssp EEEEEETTCEEEECTTCEEEEEESSCE
T ss_pred EEEEECCCcEEecCCCCeEEEecCCCE
Confidence 355789999999999999999999664
No 120
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=80.22 E-value=1.6 Score=30.24 Aligned_cols=35 Identities=11% Similarity=-0.112 Sum_probs=26.9
Q ss_pred eeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEee
Q 038528 11 TLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFS 48 (91)
Q Consensus 11 ~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d 48 (91)
...+..||.+++|+|+.|-..+.+++ .-+++.++|
T Consensus 160 ~~~~~~Gd~~~~p~g~~H~p~a~~~~---gc~~l~~~d 194 (195)
T 2q1z_B 160 TDRFGAGDIEIADQELEHTPVAERGL---DCICLAATD 194 (195)
T ss_dssp SSEEETTCEEEECSSCCCCCEECSSS---CEEEEEEEC
T ss_pred cEEECCCeEEEeCcCCccCCEeCCCC---CEEEEEEec
Confidence 35789999999999999999996443 455555543
No 121
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=80.03 E-value=1.1 Score=34.75 Aligned_cols=23 Identities=9% Similarity=0.124 Sum_probs=19.7
Q ss_pred ceeeeeccCcEEEeCCCCeEEEe
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIE 31 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~ 31 (91)
.....|+.||.+.||||++|=+.
T Consensus 239 Ln~v~l~pGd~~fipAG~~HAy~ 261 (394)
T 2wfp_A 239 LNVVKLNPGEAMFLFAETPHAYL 261 (394)
T ss_dssp EEEEEECTTCEEEECTTCCEEEE
T ss_pred heEEECCCCCEEEcCCCCceEcC
Confidence 35677999999999999999754
No 122
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=79.57 E-value=1.2 Score=32.54 Aligned_cols=28 Identities=18% Similarity=0.220 Sum_probs=23.1
Q ss_pred CCCceeeeeccCcEEEeCCCCeEEEeeC
Q 038528 6 EDDIRTLDIRRGDVYRLQPGSVFYIESN 33 (91)
Q Consensus 6 ~~~~~~~~lr~GDv~~ipaG~~~y~~N~ 33 (91)
.++.+...++.||++.+|+|+..=+--.
T Consensus 201 ~~~G~~~~~~aGD~~~~P~G~~~tWev~ 228 (238)
T 3myx_A 201 LENGSSLTVNTGDTVFVAQGAPCKWTST 228 (238)
T ss_dssp ETTSCEEEECTTCEEEECTTCEEEEEES
T ss_pred eCCCCEEEECCCCEEEECCCCEEEEEEC
Confidence 4456678999999999999998777666
No 123
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=79.36 E-value=1.7 Score=34.18 Aligned_cols=25 Identities=12% Similarity=0.361 Sum_probs=22.4
Q ss_pred eeeeeccCcEEEeCCCCeEEEeeCC
Q 038528 10 RTLDIRRGDVYRLQPGSVFYIESNL 34 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~~~y~~N~~ 34 (91)
....|+.||++.||+|..||..+.+
T Consensus 199 ~~~~L~pGD~LYiP~g~~H~~~s~~ 223 (442)
T 2xdv_A 199 HEFMLKPGDLLYFPRGTIHQADTPA 223 (442)
T ss_dssp EEEEECTTCEEEECTTCEEEEECCS
T ss_pred eEEEECCCcEEEECCCceEEEEecC
Confidence 3567899999999999999999885
No 124
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=78.19 E-value=4.5 Score=32.06 Aligned_cols=28 Identities=7% Similarity=0.348 Sum_probs=23.8
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCC
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQ 36 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~ 36 (91)
-..-.++.||++.||+|-.|+++|-.+.
T Consensus 265 ~~~v~l~pGE~LfIPsGWwH~V~nleds 292 (451)
T 2yu1_A 265 CQRIELKQGYTFVIPSGWIHAVYTPTDT 292 (451)
T ss_dssp CEEEEECTTCEEEECTTCEEEEECSSCE
T ss_pred ceEEEECCCcEEEeCCCceEEEecCCCe
Confidence 3456678999999999999999999654
No 125
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=78.04 E-value=1.1 Score=34.90 Aligned_cols=27 Identities=7% Similarity=0.232 Sum_probs=23.3
Q ss_pred eeeeeccCcEEEeCCCCeEEEeeCCCC
Q 038528 10 RTLDIRRGDVYRLQPGSVFYIESNLEQ 36 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~~~y~~N~~~~ 36 (91)
..-.++.||++.||+|-.|+++|..+.
T Consensus 217 ~ev~l~pGEtLfIPsGWwH~V~nledS 243 (371)
T 3k3o_A 217 YKCSVKQGQTLFIPTGWIHAVLTPVDC 243 (371)
T ss_dssp EEEEEETTCEEEECTTCEEEEEEEEEE
T ss_pred EEEEECCCcEEEeCCCCeEEEecCCCe
Confidence 455679999999999999999998653
No 126
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=78.02 E-value=2.1 Score=32.23 Aligned_cols=26 Identities=27% Similarity=0.101 Sum_probs=23.2
Q ss_pred eeeeeccCcEEEeCCCCeEEEeeCCC
Q 038528 10 RTLDIRRGDVYRLQPGSVFYIESNLE 35 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~~~y~~N~~~ 35 (91)
....|+.||++.||+|--|++.|-++
T Consensus 261 ~~~~l~pGD~LyiP~gWwH~V~~l~d 286 (349)
T 3d8c_A 261 YETVVGPGDVLYIPMYWWHHIESLLN 286 (349)
T ss_dssp EEEEECTTCEEEECTTCEEEEEECTT
T ss_pred EEEEECCCCEEEECCCCcEEEEEcCC
Confidence 46678999999999999999999964
No 127
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=77.88 E-value=1.2 Score=34.96 Aligned_cols=27 Identities=7% Similarity=0.202 Sum_probs=23.4
Q ss_pred eeeeeccCcEEEeCCCCeEEEeeCCCC
Q 038528 10 RTLDIRRGDVYRLQPGSVFYIESNLEQ 36 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~~~y~~N~~~~ 36 (91)
..-.++.||++.||+|-.|+++|..+.
T Consensus 244 ~ev~l~pGEtlfIPsGWwH~V~nledS 270 (392)
T 3pua_A 244 YKCIVKQGQTLFIPSGWIYATLTPVDC 270 (392)
T ss_dssp EEEEEETTCEEEECTTCEEEEEEEEEE
T ss_pred EEEEECCCcEEeeCCCceEEEecCCCE
Confidence 455779999999999999999999653
No 128
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=77.80 E-value=1.2 Score=35.65 Aligned_cols=26 Identities=8% Similarity=0.189 Sum_probs=22.9
Q ss_pred eeeeeccCcEEEeCCCCeEEEeeCCC
Q 038528 10 RTLDIRRGDVYRLQPGSVFYIESNLE 35 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~~~y~~N~~~ 35 (91)
..-.++.||++.||+|-.|+++|..+
T Consensus 336 ~~~~l~pGe~lfIPsGWwH~V~nled 361 (488)
T 3kv5_D 336 YKCVVKQGHTLFVPTGWIHAVLTSQD 361 (488)
T ss_dssp EEEEEETTCEEEECTTCEEEEEEEEE
T ss_pred EEEeeCCCCEEEeCCCceEEeeCCCC
Confidence 35568999999999999999999955
No 129
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=77.80 E-value=1.1 Score=35.15 Aligned_cols=26 Identities=8% Similarity=0.189 Sum_probs=22.8
Q ss_pred eeeeeccCcEEEeCCCCeEEEeeCCC
Q 038528 10 RTLDIRRGDVYRLQPGSVFYIESNLE 35 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~~~y~~N~~~ 35 (91)
....+++||++.||+|-.|+++|..+
T Consensus 245 ~~v~l~pGe~lfIPsGW~H~V~nled 270 (397)
T 3kv9_A 245 YKCVVKQGHTLFVPTGWIHAVLTSQD 270 (397)
T ss_dssp EEEEEETTCEEEECTTCEEEEEEEEE
T ss_pred EEEEECCCCEEEeCCCCeEEccCCcC
Confidence 34567999999999999999999955
No 130
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=77.54 E-value=4 Score=28.38 Aligned_cols=23 Identities=13% Similarity=0.222 Sum_probs=20.9
Q ss_pred eeeeccCcEEEeCCCCeEEEeeC
Q 038528 11 TLDIRRGDVYRLQPGSVFYIESN 33 (91)
Q Consensus 11 ~~~lr~GDv~~ipaG~~~y~~N~ 33 (91)
.+.+.+||++.||+|.++.+...
T Consensus 50 ~~~l~~g~l~~i~p~~~h~~~~~ 72 (276)
T 3gbg_A 50 SYEINSSSIILLKKNSIQRFSLT 72 (276)
T ss_dssp EEEECTTEEEEECTTCEEEEEEE
T ss_pred eEEEcCCCEEEEcCCCceeeccc
Confidence 88999999999999999988765
No 131
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=77.38 E-value=1.8 Score=33.19 Aligned_cols=22 Identities=23% Similarity=0.438 Sum_probs=20.6
Q ss_pred ccCcEEEeCCCCeEEEeeCCCC
Q 038528 15 RRGDVYRLQPGSVFYIESNLEQ 36 (91)
Q Consensus 15 r~GDv~~ipaG~~~y~~N~~~~ 36 (91)
+.||.+.+++|+.||..|.|-+
T Consensus 284 kpGd~Vi~~PgayH~v~n~G~~ 305 (332)
T 2xxz_A 284 RPGDLVWINAGTVHWVQATGWC 305 (332)
T ss_dssp CTTCEEEECTTCEEEEEESSSE
T ss_pred CCCCEEEECCCceEEEEeccee
Confidence 7899999999999999999865
No 132
>2jso_A Polymyxin resistance protein PMRD; antibiotic resistance, transcription, signaling Pro; NMR {Escherichia coli}
Probab=75.85 E-value=2.6 Score=26.72 Aligned_cols=36 Identities=17% Similarity=0.324 Sum_probs=26.6
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecC
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNT 50 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~ 50 (91)
+..+.+++||.+ -|=--+.|++|+ + +.+.+++++.+
T Consensus 35 ~s~~~~k~gDlL-sPL~dA~YciNr--n---~~~tvKii~As 70 (88)
T 2jso_A 35 KSDFAVKVGDLL-SPLQNALYCINR--E---KLHTVKVLSAS 70 (88)
T ss_dssp EESSCCCTTCEE-CBSSSSEEEEBT--E---EEEEEEEEEEE
T ss_pred hhcccccccccc-ccchhhhhhhcC--C---CCceEEEEecc
Confidence 346788999987 577788999999 4 45666665543
No 133
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=74.76 E-value=1.4 Score=35.80 Aligned_cols=27 Identities=11% Similarity=0.327 Sum_probs=23.4
Q ss_pred eeeeeccCcEEEeCCCCeEEEeeCCCC
Q 038528 10 RTLDIRRGDVYRLQPGSVFYIESNLEQ 36 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~~~y~~N~~~~ 36 (91)
..-.++.||++.||+|-.|+++|..+.
T Consensus 366 ~~v~l~pGEtlfIPsGW~HaV~tleDS 392 (528)
T 3pur_A 366 KRVVIKEGQTLLIPAGWIHAVLTPVDS 392 (528)
T ss_dssp EEEEEETTCEEEECTTCEEEEEEEEEE
T ss_pred EEEEECCCCEEEecCCceEEEecCCCe
Confidence 346789999999999999999999653
No 134
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=72.81 E-value=2.5 Score=27.76 Aligned_cols=22 Identities=5% Similarity=-0.339 Sum_probs=18.9
Q ss_pred eeeccCcEEEeCCCCeEE-EeeC
Q 038528 12 LDIRRGDVYRLQPGSVFY-IESN 33 (91)
Q Consensus 12 ~~lr~GDv~~ipaG~~~y-~~N~ 33 (91)
+.+++||.+++|+|+.|. ..+.
T Consensus 86 ~~~~~Gd~~~~p~g~~H~p~~~~ 108 (145)
T 2o1q_A 86 DTAIAPGYGYESANARHDKTEFP 108 (145)
T ss_dssp EEEESSEEEEECTTCEESCCEEE
T ss_pred eEeCCCEEEEECcCCccCCeECC
Confidence 678899999999999999 5444
No 135
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=72.73 E-value=5.7 Score=27.03 Aligned_cols=24 Identities=13% Similarity=0.022 Sum_probs=21.1
Q ss_pred eeeeccCcEEEeCCCCeEEEeeCC
Q 038528 11 TLDIRRGDVYRLQPGSVFYIESNL 34 (91)
Q Consensus 11 ~~~lr~GDv~~ipaG~~~y~~N~~ 34 (91)
.+.++.||.+++|+|+.|...+..
T Consensus 81 ~~~~~aGd~~~~P~g~~H~~~a~~ 104 (165)
T 3cjx_A 81 GQKQTAGCYLYEPGGSIHQFNTPR 104 (165)
T ss_dssp TSCEETTEEEEECTTCEECEECCT
T ss_pred eEEECCCeEEEeCCCCceeeEeCC
Confidence 356789999999999999999975
No 136
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=71.07 E-value=7.7 Score=26.39 Aligned_cols=37 Identities=16% Similarity=0.299 Sum_probs=27.6
Q ss_pred eeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCC
Q 038528 10 RTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTED 52 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~ 52 (91)
....+++|+++.||.|+-|--.=..+- + +.|+.++|.
T Consensus 76 ~~V~l~~Ge~yvVPkGveH~p~a~~e~---~---vLLiEp~nT 112 (140)
T 3d0j_A 76 ELTLMEKGKVYNVPAECWFYSITQKDT---K---MMYVQDSNC 112 (140)
T ss_dssp EEEECCTTCCEEECTTCEEEEEECTTC---E---EEEEEESCC
T ss_pred ceEEecCCCEEEeCCCccCcccCCCce---E---EEEEEeCCC
Confidence 357889999999999999988876443 3 445555554
No 137
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=70.56 E-value=3.2 Score=33.72 Aligned_cols=22 Identities=23% Similarity=0.388 Sum_probs=20.6
Q ss_pred ccCcEEEeCCCCeEEEeeCCCC
Q 038528 15 RRGDVYRLQPGSVFYIESNLEQ 36 (91)
Q Consensus 15 r~GDv~~ipaG~~~y~~N~~~~ 36 (91)
+.||.+.+++|+.||..|.|-+
T Consensus 343 kpGd~Vi~~PgayH~v~n~G~~ 364 (531)
T 3avr_A 343 RPGDLVWINAGTVHWVQAIGWC 364 (531)
T ss_dssp CTTCEEEECTTCEEEEEESSSE
T ss_pred CCCCEEEECCCceEEEEeccee
Confidence 7899999999999999999865
No 138
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=68.29 E-value=13 Score=25.90 Aligned_cols=34 Identities=15% Similarity=0.209 Sum_probs=25.5
Q ss_pred eccCcE--EEeCCCCeEEEeeCCCCCcccEEEEEEeecC
Q 038528 14 IRRGDV--YRLQPGSVFYIESNLEQEREKLRIYAIFSNT 50 (91)
Q Consensus 14 lr~GDv--~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~ 50 (91)
+..|++ +.||+|+-+...+.+.+ .+.+-+...|.
T Consensus 101 v~~Ge~pQ~vVP~G~wqaa~~~~g~---~~LV~C~VaPG 136 (170)
T 1yud_A 101 LAAGERPQFLVPKGCIFGSAMNQDG---FSLVGCMVSPG 136 (170)
T ss_dssp TTTTEESCEEECTTCEEEEEESSSS---EEEEEEEESSC
T ss_pred cccCceeEEEECCCCEEEEEECCCC---cEEEEEEECCC
Confidence 688999 99999999999998323 55556655443
No 139
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=67.34 E-value=9.3 Score=27.72 Aligned_cols=28 Identities=14% Similarity=0.294 Sum_probs=23.5
Q ss_pred CceeeeeccCcEEEeCCCCeEEEeeCCC
Q 038528 8 DIRTLDIRRGDVYRLQPGSVFYIESNLE 35 (91)
Q Consensus 8 ~~~~~~lr~GDv~~ipaG~~~y~~N~~~ 35 (91)
..+...++.||++.||+|+.+=+.....
T Consensus 81 ~g~~~~~~~Gd~~~ip~G~~~~w~~~~~ 108 (238)
T 3myx_A 81 GTDSVTLSTGESAVIGRGTQVRIDAQPE 108 (238)
T ss_dssp TTEEEEEETTCEEEECTTCCEEEEECTT
T ss_pred CCeEEEEcCCCEEEECCCCEEEEEecCC
Confidence 3678889999999999999987777743
No 140
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=64.86 E-value=4.6 Score=28.43 Aligned_cols=66 Identities=11% Similarity=0.169 Sum_probs=40.1
Q ss_pred eeeeeccCcEEEeCC--CCeEEEeeCCCCCcccEEEEEEeecCCC-CCCCceeecCCCccCceecccCHHHHH
Q 038528 10 RTLDIRRGDVYRLQP--GSVFYIESNLEQEREKLRIYAIFSNTED-DSYFEPVIGAYTSISDLILGFDRKVLQ 79 (91)
Q Consensus 10 ~~~~lr~GDv~~ipa--G~~~y~~N~~~~e~~~L~i~~l~d~~n~-~~~~~~flag~~~~~ni~~GF~~~iL~ 79 (91)
+...+.+||+..+++ |.+|=+-|...++ +-+.+-++-+.-. .+ +.-|-. +.....+.|||+...+-
T Consensus 128 ~~~~l~~G~v~~~~~~~g~iH~V~N~~~~~--~avsLHvY~~~~~~~~-r~~fd~-tg~~~~f~s~y~~~~~~ 196 (208)
T 2gm6_A 128 EPTRLEPGHVEAVSPTVGDIHRVHNAYDDR--VSISIHVYGANIGGVR-RSVYTE-AGERKPFISGYSNPYLP 196 (208)
T ss_dssp CCEEECTTCEEEEBTTTBCCEEEEESCSSS--CEEEEEEESSCGGGCC-EEEECT-TSCEEEECCCCSCSCCC
T ss_pred ceEEeCCCCEEEECCCCCCeEEeccCCCCC--cEEEEEEEcCCCCcce-EEEECC-CCCEEEEEeccCCCCCC
Confidence 467799999999999 9999999993332 5555555533211 11 222323 32334666777665543
No 141
>2rqx_A PMRD, polymyxin B resistance protein; signaling protein; NMR {Klebsiella pneumoniae}
Probab=64.52 E-value=5 Score=25.43 Aligned_cols=32 Identities=25% Similarity=0.320 Sum_probs=23.7
Q ss_pred eeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEE
Q 038528 11 TLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYA 45 (91)
Q Consensus 11 ~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~ 45 (91)
...+++||.+ -|=--+.|++|+... +.+.|+.
T Consensus 36 ~~~~k~GDlL-sPL~dA~YCiNrn~~--~tvKii~ 67 (89)
T 2rqx_A 36 RLRLREGDKL-TPLADARYCLNNNPT--QTLKIRN 67 (89)
T ss_dssp CCCCCTTCEE-EECSSSCEEETTCTT--SEEEEEE
T ss_pred cccccccccc-ccchhhhhhhcCCCC--ceEEEEe
Confidence 5788999988 467778999999444 3555554
No 142
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=64.25 E-value=4.2 Score=31.94 Aligned_cols=22 Identities=14% Similarity=0.193 Sum_probs=18.5
Q ss_pred eeeeeccCcEEEeCCCCeEEEe
Q 038528 10 RTLDIRRGDVYRLQPGSVFYIE 31 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~~~y~~ 31 (91)
....|+.||.+.||||++|=..
T Consensus 266 N~v~L~pGea~flpAg~~HAYl 287 (440)
T 1pmi_A 266 NHVGLNKGEAMFLQAKDPHAYI 287 (440)
T ss_dssp EEEEECTTCEEEECTTCCEEEE
T ss_pred ceEecCCCCEEecCCCCccccC
Confidence 4567999999999999999544
No 143
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=63.57 E-value=5.4 Score=32.37 Aligned_cols=22 Identities=23% Similarity=0.438 Sum_probs=20.4
Q ss_pred ccCcEEEeCCCCeEEEeeCCCC
Q 038528 15 RRGDVYRLQPGSVFYIESNLEQ 36 (91)
Q Consensus 15 r~GDv~~ipaG~~~y~~N~~~~ 36 (91)
+.||.+.+++|+.||..|.|=.
T Consensus 318 kPGdfVit~PgtyH~Vqs~Gf~ 339 (510)
T 4ask_A 318 RPGDLVWINAGTVHWVQATGWC 339 (510)
T ss_dssp CTTCEEEECTTCEEEEEESSSE
T ss_pred CCCCEEEECCCceEEEEecCee
Confidence 7899999999999999999864
No 144
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=58.46 E-value=14 Score=27.64 Aligned_cols=51 Identities=14% Similarity=0.040 Sum_probs=35.6
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeec--CCCCCCCceeecCC
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSN--TEDDSYFEPVIGAY 63 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~--~n~~~~~~~flag~ 63 (91)
-+.++.+.|.+..+-...+||..|.++.. + |.-++|. .-++...+.|-.++
T Consensus 139 g~~~~m~~GE~w~~d~~~~H~v~N~g~~~--R--IhLv~D~~~~~~~wl~~lf~~~~ 191 (290)
T 1e5r_A 139 DTVIHMRPGEIWFLDAATVHSAVNFSEIS--R--QSLCVDFAFDGPFDEKEIFADAT 191 (290)
T ss_dssp TEEECCCTTEEEECCTTSCEEEEESSSSC--C--CEEEEEEBCSSCCCGGGGBSSGG
T ss_pred CEEEecCCCCEEEEcCCCeeEEEcCCCCC--e--EEEEEEecccCCcCHHHHHhhcc
Confidence 46888999999999999999999998864 3 3334565 33333444444443
No 145
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=52.67 E-value=49 Score=22.94 Aligned_cols=40 Identities=10% Similarity=0.076 Sum_probs=28.8
Q ss_pred eeeeeccCcEEEe-CCCCeEEEeeCCCCCcccEEEEEEeecCC
Q 038528 10 RTLDIRRGDVYRL-QPGSVFYIESNLEQEREKLRIYAIFSNTE 51 (91)
Q Consensus 10 ~~~~lr~GDv~~i-paG~~~y~~N~~~~e~~~L~i~~l~d~~n 51 (91)
....+++|||..+ |.+-+|-+.|.+.++ +.+-+=+.-+..
T Consensus 121 ~~~~l~~G~v~~~~~~~giH~V~N~s~~~--~avSlHvY~pp~ 161 (200)
T 3eln_A 121 SERTLRENQCAYINDSIGLHRVENVSHTE--PAVSLHLYSPPF 161 (200)
T ss_dssp EEEEECTTCEEEECTTTCEEEEECCCSSC--CEEEEEEEESCC
T ss_pred ceEEeCCCCEEEecCCCcEEEEECCCCCC--CEEEEEeCCCCc
Confidence 3577899999999 888899999997432 555555554443
No 146
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=47.60 E-value=22 Score=25.22 Aligned_cols=37 Identities=14% Similarity=0.271 Sum_probs=26.6
Q ss_pred eeeeccCcEEEeCCC--CeEEEeeCCCCCcccEEEEEEeec
Q 038528 11 TLDIRRGDVYRLQPG--SVFYIESNLEQEREKLRIYAIFSN 49 (91)
Q Consensus 11 ~~~lr~GDv~~ipaG--~~~y~~N~~~~e~~~L~i~~l~d~ 49 (91)
...+..||+..++++ -+|=+.|...++ +.+-+=+.-+
T Consensus 123 ~~~l~~G~v~~~~p~~g~IH~V~N~~~d~--~avSLHvYg~ 161 (211)
T 3uss_A 123 RRRLEPGEVEALSPRIGDVHQVSNAFSDR--TSISIHVYGA 161 (211)
T ss_dssp CEEECTTCEEEEBTTTBCCEEEEESCSSS--CEEEEEEESS
T ss_pred eEEecCCCEEEECCCCCCEEEEccCCCCC--CEEEEEEcCC
Confidence 467899999999987 899999985332 4444444433
No 147
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=45.04 E-value=33 Score=24.86 Aligned_cols=38 Identities=8% Similarity=0.159 Sum_probs=29.6
Q ss_pred eeeeeccCcEEEeCCCC--eEEEeeCCCCCcccEEEEEEeec
Q 038528 10 RTLDIRRGDVYRLQPGS--VFYIESNLEQEREKLRIYAIFSN 49 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~--~~y~~N~~~~e~~~L~i~~l~d~ 49 (91)
....++.|||..+.||+ .|=-+|..+++ +|+.+.|--.
T Consensus 104 n~~~i~~GdvQ~MtAG~GI~HsE~n~~~~~--~l~~lQlWi~ 143 (256)
T 2vec_A 104 NHVQASAGEALLLSTQPGVSYSEHNLSKDK--PLTRMQLWLD 143 (256)
T ss_dssp CEEEEETTEEEEECCCTTCCEEEEECCSSS--CEEEEEEEEE
T ss_pred CEEEECCCeEEEEECCCCeEEEEEECCCCc--eEEEEEEEEe
Confidence 45668999999998875 78889975543 8998888744
No 148
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=44.88 E-value=20 Score=28.10 Aligned_cols=23 Identities=17% Similarity=0.151 Sum_probs=20.2
Q ss_pred eeccCcEEEeCCCCeEEEeeCCC
Q 038528 13 DIRRGDVYRLQPGSVFYIESNLE 35 (91)
Q Consensus 13 ~lr~GDv~~ipaG~~~y~~N~~~ 35 (91)
.-..||.|.||||.+|=+-|-.+
T Consensus 296 ~Q~~GeavfiPaG~~HQV~Nl~~ 318 (392)
T 2ypd_A 296 IQFLGDAIVLPAGALHQVQNFHS 318 (392)
T ss_dssp EEETTCEEEECTTCEEEEEESSE
T ss_pred EEcCCCEEEecCCCHHHHhcccc
Confidence 33779999999999999999964
No 149
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=44.26 E-value=48 Score=23.25 Aligned_cols=39 Identities=13% Similarity=0.057 Sum_probs=31.9
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCC
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTE 51 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n 51 (91)
-+.+..++|..+..-.-..|+..|+++. -|++-++|.-.
T Consensus 145 ~~~~~w~eGe~~~fDds~~Hev~N~~d~----~RvvL~~D~~r 183 (197)
T 3rcq_A 145 NETKTWEEGKVLIFDDSFEHEVWQDASS----FRLIFIVDVWH 183 (197)
T ss_dssp TEEECCCBTCEEEECTTSCEEEEECSSS----CEEEEEEEEEC
T ss_pred CEEEEeeCCcEEEEcCCeEEEEEECCCC----CEEEEEEeeeC
Confidence 3578889999999999999999999874 56666666554
No 150
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=43.66 E-value=13 Score=29.87 Aligned_cols=23 Identities=17% Similarity=0.276 Sum_probs=19.2
Q ss_pred eeeccCcEEEeCCCCeEEEeeCC
Q 038528 12 LDIRRGDVYRLQPGSVFYIESNL 34 (91)
Q Consensus 12 ~~lr~GDv~~ipaG~~~y~~N~~ 34 (91)
-.++.||++.||.|+.|-+.=.+
T Consensus 198 L~v~pgei~VIPRGi~frv~l~~ 220 (471)
T 1eyb_A 198 MLVQPNEICVIQRGMRFSIDVFE 220 (471)
T ss_dssp EEECTTEEEEECTTCCEEEECSS
T ss_pred EEeccCCEEEECCccEEEEeeCC
Confidence 46899999999999998876553
No 151
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F
Probab=42.82 E-value=9.9 Score=24.09 Aligned_cols=17 Identities=24% Similarity=0.536 Sum_probs=14.3
Q ss_pred eeeeccCcEEEeCCCCe
Q 038528 11 TLDIRRGDVYRLQPGSV 27 (91)
Q Consensus 11 ~~~lr~GDv~~ipaG~~ 27 (91)
..+|..||++.+.+|-.
T Consensus 27 ~~~l~~GDiv~v~~G~~ 43 (113)
T 2hc8_A 27 VEEVAVGDIVIVRPGEK 43 (113)
T ss_dssp GGGCCTTCEEEECTTCB
T ss_pred HHHCCCCCEEEECCCCE
Confidence 56789999999999853
No 152
>3mcb_A Nascent polypeptide-associated complex subunit Al; beta-barrel like structure, NAC, heterodimer, chaperone; 1.90A {Homo sapiens} PDB: 3lkx_B
Probab=42.58 E-value=39 Score=19.22 Aligned_cols=27 Identities=15% Similarity=0.255 Sum_probs=22.0
Q ss_pred cCCCceeeeeccCcEEEeCCCCeEEEe
Q 038528 5 DEDDIRTLDIRRGDVYRLQPGSVFYIE 31 (91)
Q Consensus 5 ~~~~~~~~~lr~GDv~~ipaG~~~y~~ 31 (91)
...+...+.+..=||++.|++-++-++
T Consensus 19 ~K~~~~lf~i~~P~V~ksp~s~TyvVf 45 (54)
T 3mcb_A 19 RKSKNILFVITKPDVYKSPASDTYIVF 45 (54)
T ss_dssp ESSSSEEEEESSCEEEECTTSSEEEEE
T ss_pred EeCCCEEEEECCCcEEEcCCCCeEEEE
Confidence 345667888999999999999887765
No 153
>2kb3_A Oxoglutarate dehydrogenase inhibitor; forkhead-associated domain, kinase substrate, GARA, FHA, cytoplasm, phosphoprotein; HET: TPO; NMR {Corynebacterium glutamicum} PDB: 2kb4_A
Probab=40.05 E-value=22 Score=23.42 Aligned_cols=21 Identities=10% Similarity=0.336 Sum_probs=13.1
Q ss_pred ccccCCCceeeeeccCcEEEe
Q 038528 2 SWADEDDIRTLDIRRGDVYRL 22 (91)
Q Consensus 2 ~~v~~~~~~~~~lr~GDv~~i 22 (91)
|||+........|+.||+|.|
T Consensus 110 T~VNg~~i~~~~L~~GD~I~i 130 (143)
T 2kb3_A 110 TYVNREPRNAQVMQTGDEIQI 130 (143)
T ss_dssp CEETTEECSEEECCTTEEEEE
T ss_pred eEECCEEcceEECCCCCEEEE
Confidence 455544334567778888777
No 154
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=39.99 E-value=68 Score=24.11 Aligned_cols=25 Identities=20% Similarity=0.268 Sum_probs=19.7
Q ss_pred ceeeeeccCcEEEeCCCCeEEEeeC
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIESN 33 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N~ 33 (91)
...+.|..||.+.||||+.|=+.=.
T Consensus 243 ~q~~~L~~~DsLLIpa~~~y~~~r~ 267 (286)
T 2qnk_A 243 GRRLSLAPDDSLLVLAGTSYAWERT 267 (286)
T ss_dssp TEEEEECTTEEEEECTTCCEEEEEC
T ss_pred CeEEeccCCCEEEecCCCeEEEEec
Confidence 4678999999999999976554443
No 155
>1gxc_A CHK2, CDS1, serine/threonine-protein kinase CHK2; phosphoprotein-binding domain, checkpoint kinase, transferase; HET: TPO; 2.7A {Homo sapiens} SCOP: b.26.1.2
Probab=39.58 E-value=21 Score=23.42 Aligned_cols=23 Identities=4% Similarity=0.034 Sum_probs=16.4
Q ss_pred eeeeccCcEEEeCCCC-eEEEeeC
Q 038528 11 TLDIRRGDVYRLQPGS-VFYIESN 33 (91)
Q Consensus 11 ~~~lr~GDv~~ipaG~-~~y~~N~ 33 (91)
...|+.||+|.+=... ..|++-+
T Consensus 117 ~~~L~~GD~I~lG~~~~~~f~f~d 140 (149)
T 1gxc_A 117 RRPLNNNSEIALSLSRNKVFVFFD 140 (149)
T ss_dssp EEECCTTEEEEESSTTCEEEEEEE
T ss_pred eEECCCCCEEEECCCCCeEEEEEE
Confidence 6789999999996643 4555544
No 156
>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens}
Probab=39.31 E-value=11 Score=24.12 Aligned_cols=16 Identities=31% Similarity=0.669 Sum_probs=13.5
Q ss_pred eeeccCcEEEeCCCCe
Q 038528 12 LDIRRGDVYRLQPGSV 27 (91)
Q Consensus 12 ~~lr~GDv~~ipaG~~ 27 (91)
.+|..||++.+.+|-.
T Consensus 40 ~~l~~GDiv~v~~G~~ 55 (124)
T 2kij_A 40 ELVQRGDIIKVVPGGK 55 (124)
T ss_dssp TTCCTTCEEECCTTCB
T ss_pred HHCCCCCEEEECCCCE
Confidence 3688999999999864
No 157
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=38.20 E-value=33 Score=24.15 Aligned_cols=33 Identities=18% Similarity=0.108 Sum_probs=24.4
Q ss_pred eeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEee
Q 038528 12 LDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFS 48 (91)
Q Consensus 12 ~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d 48 (91)
..+..||.+++|+|+.|-..-. +. =+..+++-.
T Consensus 79 ~~~~~Gd~~~~P~g~~H~p~a~-~g---c~~~vk~~~ 111 (223)
T 3o14_A 79 GDYPAGTYVRNPPTTSHVPGSA-EG---CTIFVKLWQ 111 (223)
T ss_dssp EEEETTEEEEECTTCEECCEES-SC---EEEEEEESC
T ss_pred eEECCCeEEEeCCCCccccEeC-CC---CEEEEEecC
Confidence 4789999999999999987763 22 455556533
No 158
>3anw_A GINS51, putative uncharacterized protein; SLD5 superfamily, DNA replication, replication; 2.65A {Thermococcus kodakarensis}
Probab=37.15 E-value=14 Score=25.67 Aligned_cols=19 Identities=16% Similarity=0.256 Sum_probs=15.8
Q ss_pred Cceeee-eccCcEEEeCCCC
Q 038528 8 DIRTLD-IRRGDVYRLQPGS 26 (91)
Q Consensus 8 ~~~~~~-lr~GDv~~ipaG~ 26 (91)
+.+.+. |+.|||+.||.--
T Consensus 152 d~r~Y~Pl~~~Dvv~LP~~~ 171 (188)
T 3anw_A 152 DMKEYGPFMAGDMAIIPTVI 171 (188)
T ss_dssp TSCEECCBCTTCEEEEEHHH
T ss_pred CcCcccCCCcccEEeecHHH
Confidence 467888 9999999999643
No 159
>1wid_A DNA-binding protein RAV1; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=37.02 E-value=16 Score=23.59 Aligned_cols=25 Identities=32% Similarity=0.417 Sum_probs=15.9
Q ss_pred eeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEE
Q 038528 11 TLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIY 44 (91)
Q Consensus 11 ~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~ 44 (91)
..+|+.||++ +||...+++. +|.|=
T Consensus 89 ~~~L~~GD~~------~F~~~~~~~~---~l~I~ 113 (130)
T 1wid_A 89 EKNLRAGDVV------SFSRSNGQDQ---QLYIG 113 (130)
T ss_dssp HTTCCTTCEE------EEEECCSSSC---CEEEE
T ss_pred HcCCCCCCEE------EEEEecCCCc---EEEEE
Confidence 4578889998 4677665443 55543
No 160
>3oru_A DUF1989 family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, metal binding PR; HET: MSE; 1.11A {Ruegeria SP} PDB: 3siy_A*
Probab=36.74 E-value=42 Score=24.39 Aligned_cols=32 Identities=9% Similarity=0.136 Sum_probs=25.6
Q ss_pred ccCCCceeeeeccCcEEEe-----CCCCeEEEeeCCC
Q 038528 4 ADEDDIRTLDIRRGDVYRL-----QPGSVFYIESNLE 35 (91)
Q Consensus 4 v~~~~~~~~~lr~GDv~~i-----paG~~~y~~N~~~ 35 (91)
|....-.++.|++|++++| ++-+-+|+||.+|
T Consensus 39 Ip~g~~~s~~v~~Gq~lRI~d~eG~Q~~D~l~~na~d 75 (234)
T 3oru_A 39 IPARQGRAIRMAQGEALMVINRDGSQIGDFWAFVEGD 75 (234)
T ss_dssp ECTTCEEEEEECTTCEEEEECSSSSCCEEEEEEETTE
T ss_pred ECCCCceEEEECCCCEEEEEeCCCCeEEEEEEecCCC
Confidence 3455667899999999998 6778889999865
No 161
>4h87_A Kanadaptin; FHA domain of PF00498, mRNA processing, nucleus, structural joint center for structural genomics, JCSG, protein structu initiative; HET: SO4; 1.55A {Homo sapiens}
Probab=35.91 E-value=32 Score=22.12 Aligned_cols=21 Identities=19% Similarity=0.313 Sum_probs=14.5
Q ss_pred eeeeccCcEEEeCCCCeEEEe
Q 038528 11 TLDIRRGDVYRLQPGSVFYIE 31 (91)
Q Consensus 11 ~~~lr~GDv~~ipaG~~~y~~ 31 (91)
...|+.||+|++=.=+-.|++
T Consensus 108 ~~~L~~GD~I~~G~str~yvl 128 (130)
T 4h87_A 108 YCRVHVGHVVRFGGSTRLFIL 128 (130)
T ss_dssp CEECCTTCEEEETTCSEEEEE
T ss_pred eeECCCCCEEEECCceEEEEE
Confidence 456999999998544445553
No 162
>1qu5_A Protein kinase SPK1; FHA, RAD53, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=35.65 E-value=9.9 Score=26.21 Aligned_cols=17 Identities=12% Similarity=0.344 Sum_probs=12.4
Q ss_pred eeeeccCcEEEe---CCCCe
Q 038528 11 TLDIRRGDVYRL---QPGSV 27 (91)
Q Consensus 11 ~~~lr~GDv~~i---paG~~ 27 (91)
...|+.||+|.+ |.|..
T Consensus 121 ~~~L~~GD~I~l~~d~~G~~ 140 (182)
T 1qu5_A 121 KFLLQDGDEIKIIWDKNNKF 140 (182)
T ss_dssp EEECCTTBCCEEEEEGGGTE
T ss_pred ceEcCCCCEEEEEEcCCCCE
Confidence 467899999988 44543
No 163
>3po8_A RV0020C protein, putative uncharacterized protein TB39.8; FHA domain, synthetic peptide, peptide binding protein; 1.50A {Mycobacterium tuberculosis} SCOP: b.26.1.0 PDB: 3poa_A* 2lc1_A
Probab=35.54 E-value=22 Score=21.46 Aligned_cols=23 Identities=22% Similarity=0.398 Sum_probs=14.2
Q ss_pred ccccCCCceeeeeccCcEEEeCC
Q 038528 2 SWADEDDIRTLDIRRGDVYRLQP 24 (91)
Q Consensus 2 ~~v~~~~~~~~~lr~GDv~~ipa 24 (91)
|||+........|+.||++.+-.
T Consensus 67 t~vng~~i~~~~L~~gd~i~iG~ 89 (100)
T 3po8_A 67 TTVNNAPVQEWQLADGDVIRLGH 89 (100)
T ss_dssp CEETTEECSEEECCTTCEEEETT
T ss_pred EEECCEECceEECCCCCEEEECC
Confidence 45544333456778888887754
No 164
>1lgp_A Cell cycle checkpoint protein CHFR; FHA, tungstate, domain swapping; 2.00A {Homo sapiens} SCOP: b.26.1.2 PDB: 1lgq_A
Probab=35.37 E-value=33 Score=21.14 Aligned_cols=32 Identities=22% Similarity=0.263 Sum_probs=18.9
Q ss_pred ccccCCCce---eeeeccCcEEEeCCC------CeEEEeeC
Q 038528 2 SWADEDDIR---TLDIRRGDVYRLQPG------SVFYIESN 33 (91)
Q Consensus 2 ~~v~~~~~~---~~~lr~GDv~~ipaG------~~~y~~N~ 33 (91)
|||+..... ...|+.||+|.|=.. .+.|++-.
T Consensus 70 t~vng~~l~~~~~~~L~~GD~i~~G~~~~~~~~~~~f~f~~ 110 (116)
T 1lgp_A 70 TVINKLKVVKKQTCPLQTGDVIYLVYRKNEPEHNVAYLYES 110 (116)
T ss_dssp CCCCCCCCCCSSCCCCCTTCEEEEECCSSCGGGCEEEECCC
T ss_pred cEECCEEcCCCCcEECCCCCEEEEeccCCCCCceEEEEEEc
Confidence 455543222 467888999888653 34555544
No 165
>1dmz_A Protein (protein kinase SPK1); beta-sandwich, antiparallel beta-sheets, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1fhq_A 1fhr_A* 1j4k_A* 1j4l_A* 1k2m_A* 1k2n_A*
Probab=35.31 E-value=8 Score=25.88 Aligned_cols=12 Identities=17% Similarity=0.454 Sum_probs=10.5
Q ss_pred eeeeccCcEEEe
Q 038528 11 TLDIRRGDVYRL 22 (91)
Q Consensus 11 ~~~lr~GDv~~i 22 (91)
...|+.||+|.+
T Consensus 97 ~~~L~~GD~I~l 108 (158)
T 1dmz_A 97 KFLLQDGDEIKI 108 (158)
T ss_dssp EEECCSSCCEES
T ss_pred eEEcCCCCEEEE
Confidence 477999999999
No 166
>3va4_A Mediator of DNA damage checkpoint protein 1; cell cycle, FHA domain, DNA-damage, CHK2 and MDC1 dimerizati; HET: TPO; 1.54A {Mus musculus} PDB: 3va1_A* 3umz_A 3unm_A 3unn_A* 3uot_A* 3un0_B
Probab=34.02 E-value=21 Score=23.19 Aligned_cols=21 Identities=5% Similarity=-0.004 Sum_probs=14.2
Q ss_pred ccccCCCc-----eeeeeccCcEEEe
Q 038528 2 SWADEDDI-----RTLDIRRGDVYRL 22 (91)
Q Consensus 2 ~~v~~~~~-----~~~~lr~GDv~~i 22 (91)
|||+.... +...|+.||+|.+
T Consensus 91 T~vNg~~i~l~~~~~~~L~~GD~I~l 116 (132)
T 3va4_A 91 TQIVKPPRVLPPGVSHRLRDQELILF 116 (132)
T ss_dssp EEETTTTEEECTTCCEECCTTCEEEE
T ss_pred eEECCEEcccCCCCEEECCCCCEEEE
Confidence 45654431 5577899999887
No 167
>3hx1_A SLR1951 protein; P74513_SYNY3, adenylate cyclase-like protein, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Synechocystis SP}
Probab=33.69 E-value=28 Score=22.35 Aligned_cols=23 Identities=17% Similarity=0.273 Sum_probs=15.4
Q ss_pred ccccCCCceeeeeccCcEEEeCC
Q 038528 2 SWADEDDIRTLDIRRGDVYRLQP 24 (91)
Q Consensus 2 ~~v~~~~~~~~~lr~GDv~~ipa 24 (91)
|||+........|+.||+|.|=.
T Consensus 84 T~vNg~~i~~~~L~~GD~I~iG~ 106 (131)
T 3hx1_A 84 LMINGKKVQEHIIQTGDEIVMGP 106 (131)
T ss_dssp EEETTEEESEEECCTTCEEECST
T ss_pred eEECCEEeEeEECCCCCEEEECC
Confidence 45554433457889999998844
No 168
>1uht_A Expressed protein; FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.26.1.2
Probab=32.75 E-value=22 Score=22.08 Aligned_cols=23 Identities=17% Similarity=0.475 Sum_probs=15.1
Q ss_pred ccccCCCc---eeeeeccCcEEEeCC
Q 038528 2 SWADEDDI---RTLDIRRGDVYRLQP 24 (91)
Q Consensus 2 ~~v~~~~~---~~~~lr~GDv~~ipa 24 (91)
|||+.... +...|+.||+|.+=.
T Consensus 78 T~vng~~l~~~~~~~L~~gd~i~lG~ 103 (118)
T 1uht_A 78 TLLNSNALDPETSVNLGDGDVIKLGE 103 (118)
T ss_dssp CEESSSBCCTTCEEECCTTEEEEETT
T ss_pred eEECCEECCCCCeEEcCCCCEEEECC
Confidence 45654422 257789999998844
No 169
>2kfu_A RV1827 PThr 22; FHA domain, phosphorylation, intramolecular interaction, glutamate metabolism, phosphoprotein, protein binding; HET: TPO; NMR {Mycobacterium tuberculosis} PDB: 2kkl_A
Probab=32.44 E-value=23 Score=23.95 Aligned_cols=23 Identities=9% Similarity=0.349 Sum_probs=17.2
Q ss_pred ccccCCCceeeeeccCcEEEeCC
Q 038528 2 SWADEDDIRTLDIRRGDVYRLQP 24 (91)
Q Consensus 2 ~~v~~~~~~~~~lr~GDv~~ipa 24 (91)
|||+........|+.||+|.|=.
T Consensus 119 T~VNg~~i~~~~L~~GD~I~iG~ 141 (162)
T 2kfu_A 119 TYVNREPVDSAVLANGDEVQIGK 141 (162)
T ss_dssp EEETTBCCSEEECCSSCEEEETT
T ss_pred eEECCEEcceEECCCCCEEEECC
Confidence 56765555577899999999843
No 170
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=31.89 E-value=38 Score=24.87 Aligned_cols=23 Identities=17% Similarity=0.226 Sum_probs=18.7
Q ss_pred eeeeeccCcEEEeCCCCeEEEee
Q 038528 10 RTLDIRRGDVYRLQPGSVFYIES 32 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~~~y~~N 32 (91)
+...|++||++.|||++.-|.+.
T Consensus 265 ~~~~l~~G~~~~ipa~~~~~~i~ 287 (300)
T 1zx5_A 265 ETADLHRGYSCLVPASTDSFTVE 287 (300)
T ss_dssp SEEEECTTCEEEECTTCCEEEEE
T ss_pred eEEEEccceEEEEeCCCceEEEE
Confidence 35689999999999998666663
No 171
>2e63_A KIAA1787 protein; structure genomics, neuralized domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.49 E-value=54 Score=22.34 Aligned_cols=24 Identities=17% Similarity=0.183 Sum_probs=18.9
Q ss_pred eeeccCcEE---EeCCCCeEEEeeCCC
Q 038528 12 LDIRRGDVY---RLQPGSVFYIESNLE 35 (91)
Q Consensus 12 ~~lr~GDv~---~ipaG~~~y~~N~~~ 35 (91)
..+.+||++ +-+.|-.+|.+|-.+
T Consensus 116 ~~l~~Gd~ig~~~~~~G~l~~~iNg~~ 142 (170)
T 2e63_A 116 DQLGEGDRVGVERTVAGELRLWVNGRD 142 (170)
T ss_dssp GGCCSSCCEEEEECTTSCEEEEESSCE
T ss_pred cccCCCCEEEEEEcCCcEEEEEECCcc
Confidence 345799987 457899999999854
No 172
>2xt9_B Putative signal transduction protein GARA; lyase-signaling protein complex, KDH, KGD; HET: TPP; 2.20A {Mycobacterium smegmatis}
Probab=31.14 E-value=26 Score=21.77 Aligned_cols=23 Identities=9% Similarity=0.349 Sum_probs=14.3
Q ss_pred ccccCCCceeeeeccCcEEEeCC
Q 038528 2 SWADEDDIRTLDIRRGDVYRLQP 24 (91)
Q Consensus 2 ~~v~~~~~~~~~lr~GDv~~ipa 24 (91)
|||+........|+.||+|.|=.
T Consensus 75 t~vng~~i~~~~L~~gd~i~iG~ 97 (115)
T 2xt9_B 75 TYVNREPVDSAVLANGDEVQIGK 97 (115)
T ss_dssp EEETTEECSEEEECTTCEEEETT
T ss_pred eEECCEEcceEECCCCCEEEECC
Confidence 45544433456778888888743
No 173
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=31.11 E-value=58 Score=23.19 Aligned_cols=37 Identities=16% Similarity=0.266 Sum_probs=28.2
Q ss_pred eeeeeccCcEEEeCCC--CeEEEeeCCCCCcccEEEEEEee
Q 038528 10 RTLDIRRGDVYRLQPG--SVFYIESNLEQEREKLRIYAIFS 48 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG--~~~y~~N~~~~e~~~L~i~~l~d 48 (91)
....++.|||..+-|| ++|==.|..+++ +|+.+.|--
T Consensus 81 n~~~i~~GdvQ~MtAG~GI~HsE~~~~~~~--~l~~lQlWv 119 (242)
T 1tq5_A 81 NKEQVPAGEFQIMSAGTGIRHSEYNPSSTE--RLHLYQIWI 119 (242)
T ss_dssp CEEEEETTCEEEEECTTCEEEEEECCCSSC--CEEEEEEEE
T ss_pred CcEEECCCcEEEEECCCCcEEEEEcCCCCC--eEEEEEEEE
Confidence 4566899999999777 567778875443 899888875
No 174
>1wln_A Afadin; beta sandwich, FHA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.26.1.2
Probab=29.68 E-value=53 Score=20.46 Aligned_cols=32 Identities=13% Similarity=0.179 Sum_probs=18.5
Q ss_pred ccccCCCce-eeeeccCcEEEeCCCCeEEEeeCC
Q 038528 2 SWADEDDIR-TLDIRRGDVYRLQPGSVFYIESNL 34 (91)
Q Consensus 2 ~~v~~~~~~-~~~lr~GDv~~ipaG~~~y~~N~~ 34 (91)
|||+...-. ...|+.||+|.|=.. ..|.++..
T Consensus 82 t~vNg~~i~~~~~L~~GD~I~iG~~-~~~~f~~p 114 (120)
T 1wln_A 82 TYVDGQRISETTMLQSGMRLQFGTS-HVFKFVDP 114 (120)
T ss_dssp EEETSCBCSSCEEECTTCEEEETTT-EEEEEECS
T ss_pred EEECCEEcCCCEECCCCCEEEECCc-eEEEEECC
Confidence 455443222 347888999888553 45555543
No 175
>2csw_A Ubiquitin ligase protein RNF8; 11-stranded beta sandwich, ring finger protein 8, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.26.1.2
Probab=28.52 E-value=25 Score=22.88 Aligned_cols=23 Identities=22% Similarity=0.523 Sum_probs=14.5
Q ss_pred ccccCCCce---eeeeccCcEEEeCC
Q 038528 2 SWADEDDIR---TLDIRRGDVYRLQP 24 (91)
Q Consensus 2 ~~v~~~~~~---~~~lr~GDv~~ipa 24 (91)
|||+..... ...|+.||+|.|=.
T Consensus 85 T~vNg~~i~~~~~~~L~~GD~I~iG~ 110 (145)
T 2csw_A 85 VWLNRARLEPLRVYSIHQGDYIQLGV 110 (145)
T ss_dssp EEESSCBCCBTCCEECCSSCCEEESC
T ss_pred eEECCEECCCCccEECCCCCEEEECC
Confidence 455544333 26788888888855
No 176
>4ejq_A Kinesin-like protein KIF1A; homodimer, FHA domain, transport protein; 1.89A {Homo sapiens} PDB: 2eh0_A 2g1l_A
Probab=28.30 E-value=42 Score=22.17 Aligned_cols=23 Identities=13% Similarity=0.072 Sum_probs=16.8
Q ss_pred eeeeccCcEEEeCCCCeEEEeeCC
Q 038528 11 TLDIRRGDVYRLQPGSVFYIESNL 34 (91)
Q Consensus 11 ~~~lr~GDv~~ipaG~~~y~~N~~ 34 (91)
...|+.||+|.+= .+.+|.+|+.
T Consensus 122 ~~~L~~GD~I~~G-~~~~Frf~~P 144 (154)
T 4ejq_A 122 PSILRSGNRIIMG-KSHVFRFNHP 144 (154)
T ss_dssp CEECCTTCEEEET-TTEEEEEECH
T ss_pred ceECCCCCEEEEC-CcEEEEEcCh
Confidence 3579999999993 2456788764
No 177
>2fhd_A RAD9 homolog, DNA repair protein RHP9/CRB2; tamdem tudor domains, cell cycle; HET: DNA MSE PO4; 2.40A {Schizosaccharomyces pombe}
Probab=27.93 E-value=29 Score=23.95 Aligned_cols=17 Identities=24% Similarity=0.556 Sum_probs=14.2
Q ss_pred CCceeeeeccCcEEEeC
Q 038528 7 DDIRTLDIRRGDVYRLQ 23 (91)
Q Consensus 7 ~~~~~~~lr~GDv~~ip 23 (91)
+.-|+.+||.||++++-
T Consensus 57 ~~vk~LeLRiGD~VKVd 73 (153)
T 2fhd_A 57 NQIKRFFLKKGDVVQST 73 (153)
T ss_dssp TSEEESCCCTTCEEEET
T ss_pred hhceeeeeecCCEEEEC
Confidence 34577899999999997
No 178
>2jqj_A DNA damage response protein kinase DUN1; protein/phosphopeptide, cell cycle; HET: DNA; NMR {Saccharomyces cerevisiae} PDB: 2jql_A*
Probab=27.56 E-value=38 Score=22.08 Aligned_cols=14 Identities=14% Similarity=0.216 Sum_probs=11.6
Q ss_pred eeeeccCcEEEeCC
Q 038528 11 TLDIRRGDVYRLQP 24 (91)
Q Consensus 11 ~~~lr~GDv~~ipa 24 (91)
...|+.||+|.|-.
T Consensus 100 ~~~L~~GD~I~lG~ 113 (151)
T 2jqj_A 100 DYILKNGDRIVFGK 113 (151)
T ss_dssp CEEECSSEEEEETT
T ss_pred ceECCCCCEEEECC
Confidence 36789999999966
No 179
>3mce_A Nascent polypeptide-associated complex subunit Al; beta-barrel like structure, NAC, homodimer, chaperone; 2.40A {Homo sapiens}
Probab=26.91 E-value=67 Score=18.69 Aligned_cols=26 Identities=15% Similarity=0.268 Sum_probs=18.2
Q ss_pred CCCceeeeeccCcEEEeCCCCeEEEe
Q 038528 6 EDDIRTLDIRRGDVYRLQPGSVFYIE 31 (91)
Q Consensus 6 ~~~~~~~~lr~GDv~~ipaG~~~y~~ 31 (91)
..+...+.+..=||++.|++-++-++
T Consensus 26 K~~~~lf~i~~PdV~ksp~snTyvVF 51 (61)
T 3mce_A 26 KSKNILFVITKPDVYKSPASDTYIVF 51 (61)
T ss_dssp ETTTEEEEESSCEEEEC---CEEEEE
T ss_pred ecCCEEEEECCCcEEEcCCCCeEEEE
Confidence 44567888999999999998877765
No 180
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=26.70 E-value=47 Score=24.52 Aligned_cols=24 Identities=17% Similarity=0.234 Sum_probs=18.9
Q ss_pred ceeeeeccCcEEEeCCCCeEEEee
Q 038528 9 IRTLDIRRGDVYRLQPGSVFYIES 32 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~~~y~~N 32 (91)
.+...|++||.+.|||++.-|.+.
T Consensus 286 ~~~~~l~~G~~~~vpa~~~~~~i~ 309 (319)
T 1qwr_A 286 DKTCPLKKGDHFILPAQMPDFTIK 309 (319)
T ss_dssp TEEEEEETTCEEEECTTCCCEEEE
T ss_pred CEEEEEcCCcEEEEeCCCceEEEE
Confidence 346789999999999998555553
No 181
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=26.54 E-value=1e+02 Score=23.92 Aligned_cols=22 Identities=27% Similarity=0.498 Sum_probs=18.3
Q ss_pred eeeccCcEEEeCCCCeEEEeeC
Q 038528 12 LDIRRGDVYRLQPGSVFYIESN 33 (91)
Q Consensus 12 ~~lr~GDv~~ipaG~~~y~~N~ 33 (91)
..|++||++.|||+...-+.+.
T Consensus 402 ~~l~~G~~~fvpa~~~~~i~g~ 423 (440)
T 1pmi_A 402 QKIDTGYVFFVAPGSSIELTAD 423 (440)
T ss_dssp EEEETTCEEEECTTCCEEEEEC
T ss_pred EEeccCCEEEEeCCCcEEEEEe
Confidence 6899999999999966666665
No 182
>1xn7_A Hypothetical protein YHGG; alpha+beta, GFT structural genomics, protein structure initiative, PSI, NESG; NMR {Escherichia coli} SCOP: a.4.5.62
Probab=26.39 E-value=24 Score=21.11 Aligned_cols=17 Identities=0% Similarity=0.180 Sum_probs=14.6
Q ss_pred CHHHHHHHhCCCccccc
Q 038528 74 DRKVLQSAFKRAVLLLG 90 (91)
Q Consensus 74 ~~~iL~~Af~v~~~~i~ 90 (91)
+.+-|++.|+|++.+||
T Consensus 18 sv~eLa~~l~VS~~TIR 34 (78)
T 1xn7_A 18 EAAQISQTLNTPQPMIN 34 (78)
T ss_dssp CHHHHHHHTTCCHHHHH
T ss_pred cHHHHHHHHCcCHHHHH
Confidence 56779999999999886
No 183
>1r21_A Antigen KI-67; beta sandwich, cell cycle; NMR {Homo sapiens} SCOP: b.26.1.2 PDB: 2aff_A*
Probab=25.78 E-value=33 Score=21.62 Aligned_cols=13 Identities=23% Similarity=0.575 Sum_probs=10.0
Q ss_pred eeeeccCcEEEeC
Q 038528 11 TLDIRRGDVYRLQ 23 (91)
Q Consensus 11 ~~~lr~GDv~~ip 23 (91)
...|+.||+|.|=
T Consensus 87 ~~~L~~Gd~i~iG 99 (128)
T 1r21_A 87 PVRLKHGDVITII 99 (128)
T ss_dssp CEECCTTEEEECS
T ss_pred cEEcCCCCEEEEC
Confidence 3678889988884
No 184
>3di4_A Uncharacterized protein DUF1989; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=25.23 E-value=83 Score=23.54 Aligned_cols=33 Identities=9% Similarity=0.262 Sum_probs=26.1
Q ss_pred ccCCCceeeeeccCcEEEe-----CCCCeEEEeeCCCC
Q 038528 4 ADEDDIRTLDIRRGDVYRL-----QPGSVFYIESNLEQ 36 (91)
Q Consensus 4 v~~~~~~~~~lr~GDv~~i-----paG~~~y~~N~~~~ 36 (91)
|....-.++.|++|++++| ++-+-++++|.+|-
T Consensus 53 Ipag~~~s~~V~~Gq~lRI~d~eG~Qv~Dll~~na~d~ 90 (286)
T 3di4_A 53 VPPREGRCFEVKAGQFFRISSVEGPQVGDLNLHNLHDL 90 (286)
T ss_dssp ECBTCEEEEEECTTCEEEEEECSSCCCEEEEEEETTEE
T ss_pred eCCCCceEEEECCCCEEEEEeCCCCeEEEEEEecCCCc
Confidence 3455667899999999999 56777899998764
No 185
>2o8x_A Probable RNA polymerase sigma-C factor; promoter recognition, transcription regulation, helix-turn-H motif, transcription; 3.00A {Mycobacterium tuberculosis}
Probab=25.20 E-value=24 Score=19.10 Aligned_cols=22 Identities=14% Similarity=0.073 Sum_probs=18.8
Q ss_pred eecccCHHHHHHHhCCCccccc
Q 038528 69 LILGFDRKVLQSAFKRAVLLLG 90 (91)
Q Consensus 69 i~~GF~~~iL~~Af~v~~~~i~ 90 (91)
++.|++.+-+++.+|+++..++
T Consensus 28 ~~~g~s~~eIA~~lgis~~tv~ 49 (70)
T 2o8x_A 28 QLLGLSYADAAAVCGCPVGTIR 49 (70)
T ss_dssp HTSCCCHHHHHHHHTSCHHHHH
T ss_pred HHcCCCHHHHHHHHCcCHHHHH
Confidence 5789999999999999987664
No 186
>1kcq_A Gelsolin, brevin, ADF, AGEL; alpha-beta structure, actin-binding protein, familial amyloi finnish type, cadmium binding, metal binding; 1.65A {Homo sapiens} SCOP: d.109.1.1
Probab=24.53 E-value=56 Score=19.89 Aligned_cols=24 Identities=17% Similarity=0.123 Sum_probs=19.9
Q ss_pred eeeeccCcEEEeCCCCeEEEeeCC
Q 038528 11 TLDIRRGDVYRLQPGSVFYIESNL 34 (91)
Q Consensus 11 ~~~lr~GDv~~ipaG~~~y~~N~~ 34 (91)
...|..||++.|-.|...|+.+=.
T Consensus 23 ~~sLns~d~FILd~g~~iyvW~G~ 46 (104)
T 1kcq_A 23 WESFNNGDCFILDLGNNIHQWCGS 46 (104)
T ss_dssp GGGCCTTSEEEEECSSEEEEEECT
T ss_pred HHHcCCCCeEEEeCCCEEEEEeCC
Confidence 445778999999999999998763
No 187
>1o9y_A HRCQ2; secretory protein, HRP, type III secretion system, phytopathogenicity; 2.29A {Pseudomonas syringae} SCOP: b.139.1.1
Probab=24.44 E-value=61 Score=19.33 Aligned_cols=23 Identities=4% Similarity=0.046 Sum_probs=16.3
Q ss_pred eeeeccCcEEEeC--CCCeEEEeeC
Q 038528 11 TLDIRRGDVYRLQ--PGSVFYIESN 33 (91)
Q Consensus 11 ~~~lr~GDv~~ip--aG~~~y~~N~ 33 (91)
..+|++|||+.+. ++-..-++=+
T Consensus 33 ll~L~~GdVi~Ld~~~~e~v~i~vn 57 (84)
T 1o9y_A 33 LRRLDAGTILEVTGISPGHATLCHG 57 (84)
T ss_dssp HHTCCTTCEEEECSSCTTEEEEEET
T ss_pred HhcCCCCCEEEeCCCCCCCEEEEEC
Confidence 3468899999998 4656655554
No 188
>2jmz_A Hypothetical protein MJ0781; unknown function; NMR {Methanocaldococcus jannaschii} PDB: 2jnq_A
Probab=24.18 E-value=28 Score=23.50 Aligned_cols=18 Identities=17% Similarity=0.259 Sum_probs=13.5
Q ss_pred ceeeeeccCcEEEeCCCC
Q 038528 9 IRTLDIRRGDVYRLQPGS 26 (91)
Q Consensus 9 ~~~~~lr~GDv~~ipaG~ 26 (91)
.+-.+|+.||.+++|.|.
T Consensus 116 ~~A~eLk~GD~v~~~~~~ 133 (186)
T 2jmz_A 116 INAEMVKVGDYIYIPKNN 133 (186)
T ss_dssp EEGGGCCTTSEEEEECSS
T ss_pred EEhhcCCCCCEEEecccC
Confidence 345678889999888754
No 189
>3hvz_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.20A {Clostridium leptum}
Probab=22.68 E-value=52 Score=19.60 Aligned_cols=16 Identities=38% Similarity=0.430 Sum_probs=12.5
Q ss_pred eeccCcEEEeCCCCeE
Q 038528 13 DIRRGDVYRLQPGSVF 28 (91)
Q Consensus 13 ~lr~GDv~~ipaG~~~ 28 (91)
-.-.||++.+|+|++.
T Consensus 11 ~tP~G~~~~lp~GaT~ 26 (78)
T 3hvz_A 11 FTPKGDVISLPIGSTV 26 (78)
T ss_dssp ECTTSCEEEEETTCBH
T ss_pred ECCCCCEEEecCCCCH
Confidence 3457999999999763
No 190
>1tc3_C Protein (TC3 transposase); DNA binding, helix-turn-helix, TC1/mariner family, complex (transposase/DNA), DNA binding protein/DNA complex; HET: DNA; 2.45A {Caenorhabditis elegans} SCOP: a.4.1.2
Probab=22.39 E-value=45 Score=16.10 Aligned_cols=20 Identities=10% Similarity=0.185 Sum_probs=16.9
Q ss_pred ecccCHHHHHHHhCCCcccc
Q 038528 70 ILGFDRKVLQSAFKRAVLLL 89 (91)
Q Consensus 70 ~~GF~~~iL~~Af~v~~~~i 89 (91)
..|.+..-+++.|+++..++
T Consensus 19 ~~g~s~~~IA~~lgis~~Tv 38 (51)
T 1tc3_C 19 LLNVSLHEMSRKISRSRHCI 38 (51)
T ss_dssp HTTCCHHHHHHHHTCCHHHH
T ss_pred HcCCCHHHHHHHHCcCHHHH
Confidence 46889999999999998765
No 191
>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A
Probab=21.94 E-value=43 Score=17.62 Aligned_cols=14 Identities=29% Similarity=0.624 Sum_probs=9.8
Q ss_pred eeeeeccCcEEEeC
Q 038528 10 RTLDIRRGDVYRLQ 23 (91)
Q Consensus 10 ~~~~lr~GDv~~ip 23 (91)
....+++||+|.|-
T Consensus 16 ~eLs~~~Gd~i~v~ 29 (58)
T 1zuy_A 16 SELPLKKGDVIYIT 29 (58)
T ss_dssp TBCCBCTTCEEEEE
T ss_pred CcCCCCCCCEEEEE
Confidence 34567888888763
No 192
>1g6g_A Protein kinase RAD53; beta-sandwich, phosphopeptide complex, cell cycle; HET: TPO; 1.60A {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=21.63 E-value=62 Score=20.34 Aligned_cols=16 Identities=19% Similarity=0.254 Sum_probs=11.8
Q ss_pred eeeeccCcEEEeCCCC
Q 038528 11 TLDIRRGDVYRLQPGS 26 (91)
Q Consensus 11 ~~~lr~GDv~~ipaG~ 26 (91)
...|+.||+|.+=...
T Consensus 93 ~~~L~~Gd~I~lG~~~ 108 (127)
T 1g6g_A 93 NQLLSQGDEITVGVGV 108 (127)
T ss_dssp CEECCTTCEEEECTTS
T ss_pred eEEcCCCCEEEECCCc
Confidence 3678888888886654
No 193
>3gqs_A Adenylate cyclase-like protein; FHA domain, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.20A {Chlamydia trachomatis}
Probab=21.62 E-value=25 Score=21.45 Aligned_cols=22 Identities=14% Similarity=0.149 Sum_probs=14.0
Q ss_pred ccccCCCce-eeeeccCcEEEeC
Q 038528 2 SWADEDDIR-TLDIRRGDVYRLQ 23 (91)
Q Consensus 2 ~~v~~~~~~-~~~lr~GDv~~ip 23 (91)
|||+..... ...|+.||+|.+-
T Consensus 71 t~vng~~i~~~~~L~~Gd~i~~G 93 (106)
T 3gqs_A 71 VIVEGRKIEHQSTLSANQVVALG 93 (106)
T ss_dssp CEETTEECSSEEECCTTCCEEET
T ss_pred eEECCEECCCCeECCCCCEEEEC
Confidence 455433222 3588999999884
No 194
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=21.43 E-value=50 Score=25.16 Aligned_cols=26 Identities=12% Similarity=0.279 Sum_probs=19.4
Q ss_pred EEEeCCCCeE--EEeeCCCCCcccEEEEEEeecCC
Q 038528 19 VYRLQPGSVF--YIESNLEQEREKLRIYAIFSNTE 51 (91)
Q Consensus 19 v~~ipaG~~~--y~~N~~~~e~~~L~i~~l~d~~n 51 (91)
++.+|.||++ |++-.++ + +.|+||..
T Consensus 43 ~~~~~~GtsyNsYLI~~~~----~---~vLIDtg~ 70 (410)
T 4dik_A 43 VWEIPEGISYNAYLVKLNG----A---NVLIDGWK 70 (410)
T ss_dssp TEECTTCEEEEEEEEECSS----C---EEEECCCC
T ss_pred eeeCCCceEEEEEEEEECC----e---EEEEeCCC
Confidence 5899999985 9986644 2 46788864
No 195
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=21.34 E-value=49 Score=25.32 Aligned_cols=23 Identities=13% Similarity=0.086 Sum_probs=18.5
Q ss_pred eeeeeccCcEEEeCCCCeEEEee
Q 038528 10 RTLDIRRGDVYRLQPGSVFYIES 32 (91)
Q Consensus 10 ~~~~lr~GDv~~ipaG~~~y~~N 32 (91)
+...|++||++.|||+..-|.+.
T Consensus 360 ~~~~l~~G~~~fvpa~~~~~~i~ 382 (394)
T 2wfp_A 360 QRLVLKPGESAFIGADESPVNAS 382 (394)
T ss_dssp EEEEECTTCEEEECGGGCCEEEE
T ss_pred eEEEEccCcEEEEeCCCceEEEE
Confidence 45789999999999997556554
No 196
>2cqa_A RUVB-like 2; TIP48, TIP49B, reptin 52, ECP-51, TAP54-beta, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.40.4.14
Probab=20.98 E-value=34 Score=21.74 Aligned_cols=13 Identities=23% Similarity=0.562 Sum_probs=10.6
Q ss_pred eeccCcEEEeCCC
Q 038528 13 DIRRGDVYRLQPG 25 (91)
Q Consensus 13 ~lr~GDv~~ipaG 25 (91)
.++.||||.|-+-
T Consensus 62 kV~~GDVI~Id~~ 74 (95)
T 2cqa_A 62 KVQAGDVITIDKA 74 (95)
T ss_dssp TCCTTSEEEEETT
T ss_pred CceeCCEEEEEcc
Confidence 5788999998773
No 197
>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A
Probab=20.95 E-value=40 Score=18.61 Aligned_cols=15 Identities=27% Similarity=0.474 Sum_probs=11.0
Q ss_pred eeeeccCcEEEeCCC
Q 038528 11 TLDIRRGDVYRLQPG 25 (91)
Q Consensus 11 ~~~lr~GDv~~ipaG 25 (91)
.-.|++||+|.|-.-
T Consensus 26 eLsf~~Gd~i~v~~~ 40 (70)
T 1gcq_C 26 FLRLNPGDIVELTKA 40 (70)
T ss_dssp BCCBCTTCEEEEEEC
T ss_pred cCCcCCCCEEEEEeC
Confidence 566789999877543
No 198
>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1
Probab=20.75 E-value=41 Score=18.45 Aligned_cols=13 Identities=31% Similarity=0.549 Sum_probs=10.4
Q ss_pred eeeccCcEEEeCC
Q 038528 12 LDIRRGDVYRLQP 24 (91)
Q Consensus 12 ~~lr~GDv~~ipa 24 (91)
-.|++||+|.|-.
T Consensus 25 Lsf~~Gd~i~v~~ 37 (67)
T 3rnj_A 25 LSFKEGDLITLLV 37 (67)
T ss_dssp CCBCTTCEEEECS
T ss_pred ccCCCCCEEEEee
Confidence 6789999998753
No 199
>4gof_A Small glutamine-rich tetratricopeptide repeat-CON protein alpha; four-helix bundle, protein-protein interaction, UBL4A ubiqui domain; 1.35A {Homo sapiens} PDB: 4goe_A 4god_A
Probab=20.74 E-value=40 Score=19.10 Aligned_cols=13 Identities=31% Similarity=0.314 Sum_probs=9.9
Q ss_pred HHHHHHhCCCccc
Q 038528 76 KVLQSAFKRAVLL 88 (91)
Q Consensus 76 ~iL~~Af~v~~~~ 88 (91)
+=|++||+|+++.
T Consensus 35 qCi~~aF~v~~~d 47 (52)
T 4gof_A 35 QCLETAFGVTVED 47 (52)
T ss_dssp HHHHHHHTCCSSC
T ss_pred HHHHHHcCCCccc
Confidence 3478999998764
No 200
>2pie_A E3 ubiquitin-protein ligase RNF8; FHA domain, complex, ligase, signaling protein; HET: TPO; 1.35A {Homo sapiens} SCOP: b.26.1.2
Probab=20.74 E-value=30 Score=22.27 Aligned_cols=14 Identities=29% Similarity=0.449 Sum_probs=10.4
Q ss_pred eeeeccCcEEEeCC
Q 038528 11 TLDIRRGDVYRLQP 24 (91)
Q Consensus 11 ~~~lr~GDv~~ipa 24 (91)
...|+.||+|.|=.
T Consensus 89 ~~~L~~GD~I~lG~ 102 (138)
T 2pie_A 89 VYSIHQGDYIQLGV 102 (138)
T ss_dssp CEECCTTCEEEESC
T ss_pred cEECCCCCEEEECC
Confidence 36688888888855
No 201
>1fse_A GERE; helix-turn-helix DNA-binding protein transcriptional regulat transcription; 2.05A {Bacillus subtilis} SCOP: a.4.6.2
Probab=20.73 E-value=33 Score=18.69 Aligned_cols=22 Identities=14% Similarity=0.019 Sum_probs=18.5
Q ss_pred eecccCHHHHHHHhCCCccccc
Q 038528 69 LILGFDRKVLQSAFKRAVLLLG 90 (91)
Q Consensus 69 i~~GF~~~iL~~Af~v~~~~i~ 90 (91)
++.|++.+-+++.++++...++
T Consensus 23 ~~~g~s~~eIA~~l~is~~tV~ 44 (74)
T 1fse_A 23 LVQDKTTKEIASELFISEKTVR 44 (74)
T ss_dssp HTTTCCHHHHHHHHTSCHHHHH
T ss_pred HHcCCCHHHHHHHHCCCHHHHH
Confidence 4678999999999999987664
No 202
>3fm8_A Kinesin-like protein KIF13B; kinesin, GAP, GTPase activation, structural genomics consort ATP-binding, cytoskeleton, microtubule, motor protein, NUCL binding; 2.30A {Homo sapiens} PDB: 3mdb_A*
Probab=20.71 E-value=83 Score=20.16 Aligned_cols=21 Identities=14% Similarity=0.243 Sum_probs=11.8
Q ss_pred eeeccCcEEEeCCCCeEEEeeC
Q 038528 12 LDIRRGDVYRLQPGSVFYIESN 33 (91)
Q Consensus 12 ~~lr~GDv~~ipaG~~~y~~N~ 33 (91)
..|+.||+|.|=. +.+|.+|.
T Consensus 103 ~~L~~GD~I~lG~-~~~FrFn~ 123 (124)
T 3fm8_A 103 IQLHHGDRILWGN-NHFFRLNL 123 (124)
T ss_dssp EEECTTCEEEETT-TEEEEEEC
T ss_pred EECCCCCEEEECC-CeEEEEEC
Confidence 4567777766532 34455554
No 203
>1eik_A RNA polymerase subunit RPB5; RPBH, OCSP, NESG, protein structure initiative, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.78.1.1
Probab=20.67 E-value=35 Score=20.85 Aligned_cols=13 Identities=23% Similarity=0.693 Sum_probs=10.1
Q ss_pred eeeeccCcEEEeC
Q 038528 11 TLDIRRGDVYRLQ 23 (91)
Q Consensus 11 ~~~lr~GDv~~ip 23 (91)
-+.+++|||+.|=
T Consensus 48 ~~G~k~GdVvkI~ 60 (77)
T 1eik_A 48 AIGAKRGDIVKII 60 (77)
T ss_dssp GGGCCTTCEEEEE
T ss_pred HhCCCCCCEEEEE
Confidence 3467999999883
No 204
>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1
Probab=20.61 E-value=41 Score=19.11 Aligned_cols=15 Identities=27% Similarity=0.441 Sum_probs=10.4
Q ss_pred eeeeeccCcEEEeCC
Q 038528 10 RTLDIRRGDVYRLQP 24 (91)
Q Consensus 10 ~~~~lr~GDv~~ipa 24 (91)
..-.|++||+|.|-.
T Consensus 33 ~eLsf~~Gd~i~v~~ 47 (78)
T 1k1z_A 33 GFLRLNPGDIVELTK 47 (78)
T ss_dssp CCCCBCTTCEEEEEE
T ss_pred CccCCCCCCEEEEEE
Confidence 345678898887644
No 205
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=20.49 E-value=1.6e+02 Score=22.67 Aligned_cols=47 Identities=13% Similarity=0.034 Sum_probs=31.5
Q ss_pred CCCceeeeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEEEeecCCC
Q 038528 6 EDDIRTLDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYAIFSNTED 52 (91)
Q Consensus 6 ~~~~~~~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~l~d~~n~ 52 (91)
+..+...+++.||+++.-..|.|=--..++...++.|++++--...+
T Consensus 230 e~~~~ewd~epGDav~F~~~tlHga~plgn~~~~rRRAfS~RfvGDD 276 (344)
T 3nnf_A 230 KDGYEEDEYNLGDAFFFNKYVLHQSVPLKPGLHKLRRAFVIRLVDYD 276 (344)
T ss_dssp TTCEEECCBCTTCEEEEETTCEEEECCBCTTSCSCEEEEEEEEEETT
T ss_pred hhhhccccCCCCcEEEEecceeecCCCCCCCCccceeEEEEEEecCc
Confidence 56788999999999999999998877222221124555555544443
No 206
>2jpc_A SSRB; DNA binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium}
Probab=20.47 E-value=24 Score=18.73 Aligned_cols=22 Identities=5% Similarity=0.158 Sum_probs=18.1
Q ss_pred eecccCHHHHHHHhCCCccccc
Q 038528 69 LILGFDRKVLQSAFKRAVLLLG 90 (91)
Q Consensus 69 i~~GF~~~iL~~Af~v~~~~i~ 90 (91)
++.|.+.+-+++.+++++.+++
T Consensus 10 ~~~g~s~~eIA~~l~is~~tV~ 31 (61)
T 2jpc_A 10 IDEGYTNHGISEKLHISIKTVE 31 (61)
T ss_dssp HHTSCCSHHHHHHTCSCHHHHH
T ss_pred HHcCCCHHHHHHHhCCCHHHHH
Confidence 4678899999999999987764
No 207
>1gmu_A UREE; metallochaperone; 1.5A {Klebsiella aerogenes} SCOP: b.107.1.1 d.58.38.1 PDB: 1gmw_A 1gmw_D 1gmv_A
Probab=20.15 E-value=79 Score=20.84 Aligned_cols=31 Identities=23% Similarity=0.354 Sum_probs=23.1
Q ss_pred eeeccCcEEEeCCCCeEEEeeCCCCCcccEEEEE
Q 038528 12 LDIRRGDVYRLQPGSVFYIESNLEQEREKLRIYA 45 (91)
Q Consensus 12 ~~lr~GDv~~ipaG~~~y~~N~~~~e~~~L~i~~ 45 (91)
..|+.||++..-.|.+.+.+....+ ++..|.
T Consensus 48 ~~L~dGDvL~~ddg~~~v~V~aa~E---~vl~v~ 78 (143)
T 1gmu_A 48 LLLRGGDVLSNEEGTEFVQVIAADE---EVSVVR 78 (143)
T ss_dssp CCCCTTCEEECTTSCCEEEEEECEE---EEEEEE
T ss_pred cccCCCCEEEECCCCEEEEEEECCC---cEEEEE
Confidence 4689999999999986777777543 555554
No 208
>4ayb_H DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2wb1_H 2y0s_H 2waq_H 4b1o_H 4b1p_Z 2pmz_H 3hkz_H
Probab=20.00 E-value=41 Score=20.71 Aligned_cols=13 Identities=23% Similarity=0.687 Sum_probs=10.1
Q ss_pred eeeeccCcEEEeC
Q 038528 11 TLDIRRGDVYRLQ 23 (91)
Q Consensus 11 ~~~lr~GDv~~ip 23 (91)
-..+++|||+.|-
T Consensus 54 ~~g~k~GdVvkI~ 66 (84)
T 4ayb_H 54 SINAKPGDIIRII 66 (84)
T ss_dssp HHTCCTTCEEEEE
T ss_pred hhCCCCCCEEEEE
Confidence 3567999999874
Done!