Your job contains 1 sequence.
>038532
MATTSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPVQISSRNLAKIVEWCK
CMQHRDRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLDRL
CQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWALHD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038532
(164 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2165825 - symbol:ASK2 "AT5G42190" species:3702... 330 7.9e-30 1
TAIR|locus:2124281 - symbol:SK11 "AT4G34210" species:3702... 214 8.6e-30 2
TAIR|locus:2139504 - symbol:SK12 "AT4G34470" species:3702... 210 2.9e-29 2
TAIR|locus:2204435 - symbol:SKP1 "AT1G75950" species:3702... 321 7.1e-29 1
DICTYBASE|DDB_G0269230 - symbol:fpaA "ubiquitin ligase su... 194 1.7e-27 2
DICTYBASE|DDB_G0273615 - symbol:fpaB-2 "ubiquitin ligase ... 194 1.7e-27 2
DICTYBASE|DDB_G0273251 - symbol:fpaB-1 "ubiquitin ligase ... 194 1.7e-27 2
TAIR|locus:2198621 - symbol:SK4 "AT1G20140" species:3702 ... 305 3.5e-27 1
MGI|MGI:103575 - symbol:Skp1a "S-phase kinase-associated ... 195 7.4e-27 2
RGD|1359648 - symbol:Skp1 "S-phase kinase-associated prot... 195 7.4e-27 2
ZFIN|ZDB-GENE-040426-1707 - symbol:skp1 "S-phase kinase-a... 195 1.2e-26 2
UNIPROTKB|Q5ZKF5 - symbol:SKP1 "S-phase kinase-associated... 195 1.9e-26 2
UNIPROTKB|Q3ZCF3 - symbol:SKP1 "S-phase kinase-associated... 195 1.9e-26 2
UNIPROTKB|P63208 - symbol:SKP1 "S-phase kinase-associated... 195 1.9e-26 2
UNIPROTKB|P63209 - symbol:SKP1 "S-phase kinase-associated... 195 1.9e-26 2
UNIPROTKB|Q4R5B9 - symbol:SKP1 "S-phase kinase-associated... 195 1.9e-26 2
UNIPROTKB|Q5R512 - symbol:SKP1 "S-phase kinase-associated... 195 1.9e-26 2
UNIPROTKB|Q71U00 - symbol:skp1 "S-phase kinase-associated... 195 1.9e-26 2
UNIPROTKB|E2RRW0 - symbol:SKP1 "Uncharacterized protein" ... 195 4.0e-26 2
TAIR|locus:2050281 - symbol:SK3 "AT2G25700" species:3702 ... 293 6.6e-26 1
TAIR|locus:2056956 - symbol:SK14 "AT2G03170" species:3702... 191 4.4e-25 2
UNIPROTKB|E5RJR5 - symbol:SKP1 "S-phase kinase-associated... 181 5.6e-25 2
UNIPROTKB|G3MZV0 - symbol:G3MZV0 "Uncharacterized protein... 186 7.1e-25 2
UNIPROTKB|F8W8N3 - symbol:SKP1 "S-phase kinase-associated... 180 7.1e-25 2
TAIR|locus:2080532 - symbol:SK13 "AT3G60010" species:3702... 168 4.9e-24 2
POMBASE|SPBC409.05 - symbol:skp1 "SCF ubiquitin ligase co... 275 5.3e-24 1
WB|WBGene00004807 - symbol:skr-1 species:6239 "Caenorhabd... 268 2.9e-23 1
UNIPROTKB|G5ECU1 - symbol:skr-1 "Protein SKR-1" species:6... 268 2.9e-23 1
TAIR|locus:2102370 - symbol:SK15 "AT3G25650" species:3702... 177 5.4e-23 2
FB|FBgn0025637 - symbol:skpA "skpA" species:7227 "Drosoph... 264 7.8e-23 1
TAIR|locus:2056966 - symbol:SK19 "AT2G03160" species:3702... 170 1.1e-22 2
WB|WBGene00004808 - symbol:skr-2 species:6239 "Caenorhabd... 186 1.4e-22 2
UNIPROTKB|G5EDD8 - symbol:skr-2 "SKR-2" species:6239 "Cae... 186 1.4e-22 2
TAIR|locus:2093084 - symbol:SK9 "AT3G21850" species:3702 ... 183 1.4e-22 2
TAIR|locus:2093094 - symbol:SK10 "AT3G21860" species:3702... 161 2.9e-22 2
UNIPROTKB|E7ERH2 - symbol:SKP1 "S-phase kinase-associated... 149 1.2e-21 2
ASPGD|ASPL0000044827 - symbol:sconC species:162425 "Emeri... 252 1.5e-21 1
UNIPROTKB|G4N3J5 - symbol:MGG_04978 "E3 ubiquitin ligase ... 250 2.4e-21 1
CGD|CAL0001786 - symbol:SKP1 species:5476 "Candida albica... 247 4.9e-21 1
TAIR|locus:2056931 - symbol:SK16 "AT2G03190" species:3702... 247 4.9e-21 1
WB|WBGene00004809 - symbol:skr-3 species:6239 "Caenorhabd... 158 2.2e-20 2
TAIR|locus:2080542 - symbol:SK5 "AT3G60020" species:3702 ... 151 2.4e-19 2
TAIR|locus:2061709 - symbol:MEO "AT2G20160" species:3702 ... 134 8.1e-19 2
FB|FBgn0034863 - symbol:skpF "skpF" species:7227 "Drosoph... 224 1.4e-18 1
SGD|S000002736 - symbol:SKP1 "Evolutionarily conserved ki... 221 2.8e-18 1
FB|FBgn0026176 - symbol:skpB "skpB" species:7227 "Drosoph... 220 3.6e-18 1
TAIR|locus:2093064 - symbol:SK8 "AT3G21830" species:3702 ... 206 1.1e-16 1
FB|FBgn0026175 - symbol:skpC "skpC" species:7227 "Drosoph... 190 5.4e-15 1
WB|WBGene00004814 - symbol:skr-8 species:6239 "Caenorhabd... 112 1.4e-14 2
FB|FBgn0026174 - symbol:skpD "skpD" species:7227 "Drosoph... 185 1.8e-14 1
WB|WBGene00004815 - symbol:skr-9 species:6239 "Caenorhabd... 112 3.0e-14 2
FB|FBgn0031074 - symbol:skpE "skpE" species:7227 "Drosoph... 108 3.0e-14 2
WB|WBGene00004810 - symbol:skr-4 species:6239 "Caenorhabd... 178 1.0e-13 1
WB|WBGene00004813 - symbol:skr-7 species:6239 "Caenorhabd... 167 1.5e-12 1
WB|WBGene00004811 - symbol:skr-5 species:6239 "Caenorhabd... 114 2.8e-12 2
WB|WBGene00004816 - symbol:skr-10 species:6239 "Caenorhab... 161 6.4e-12 1
WB|WBGene00004818 - symbol:skr-12 species:6239 "Caenorhab... 96 4.9e-10 2
TAIR|locus:2093074 - symbol:SK7 "AT3G21840" species:3702 ... 112 1.1e-09 2
WB|WBGene00004821 - symbol:skr-15 species:6239 "Caenorhab... 94 4.7e-09 2
WB|WBGene00004820 - symbol:skr-14 species:6239 "Caenorhab... 97 4.7e-09 2
WB|WBGene00004819 - symbol:skr-13 species:6239 "Caenorhab... 97 6.0e-09 2
WB|WBGene00004812 - symbol:skr-6 species:6239 "Caenorhabd... 102 3.8e-08 2
UNIPROTKB|E5RGM3 - symbol:SKP1 "S-phase kinase-associated... 118 2.3e-07 1
WB|WBGene00004822 - symbol:skr-16 species:6239 "Caenorhab... 92 3.4e-07 2
TAIR|locus:2085201 - symbol:SK6 "AT3G53060" species:3702 ... 73 4.4e-07 2
TAIR|locus:505006407 - symbol:SK21 "AT3G61415" species:37... 100 2.7e-06 2
WB|WBGene00004826 - symbol:skr-20 species:6239 "Caenorhab... 92 5.5e-06 2
UNIPROTKB|G5EE98 - symbol:skr-20 "Protein SKR-20" species... 92 5.5e-06 2
WB|WBGene00004823 - symbol:skr-17 species:6239 "Caenorhab... 85 6.7e-05 2
UNIPROTKB|E5RI56 - symbol:SKP1 "S-phase kinase-associated... 94 8.1e-05 1
TAIR|locus:2050709 - symbol:SK20 "AT2G45950" species:3702... 95 0.00021 2
>TAIR|locus:2165825 [details] [associations]
symbol:ASK2 "AT5G42190" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0005737
"cytoplasm" evidence=NAS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA;RCA;TAS] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009793 "embryo development ending in seed
dormancy" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0042752 "regulation of circadian rhythm"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0019048 GO:GO:0007059 GO:GO:0009734
GO:GO:0009873 GO:GO:0009793 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 EMBL:AB017067 GO:GO:0006511
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
UniGene:At.23304 OMA:KNWDADF EMBL:U97021 EMBL:AF059295
EMBL:BT004798 EMBL:AK227773 IPI:IPI00540947 RefSeq:NP_568603.1
UniGene:At.71056 ProteinModelPortal:Q9FHW7 SMR:Q9FHW7
DIP:DIP-31326N IntAct:Q9FHW7 STRING:Q9FHW7 PaxDb:Q9FHW7
PRIDE:Q9FHW7 EnsemblPlants:AT5G42190.1 GeneID:834224
KEGG:ath:AT5G42190 GeneFarm:4982 TAIR:At5g42190 InParanoid:Q9FHW7
PhylomeDB:Q9FHW7 ProtClustDB:CLSN2917730 Genevestigator:Q9FHW7
GermOnline:AT5G42190 Uniprot:Q9FHW7
Length = 171
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 71/169 (42%), Positives = 100/169 (59%)
Query: 1 MATTSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPV-QISSRNLAKIVEWC 59
M+T + L+SSD E FE+++ V ++S TI++MIEDD D IP+ ++S+ L+K++E+C
Sbjct: 1 MSTVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYC 60
Query: 60 KC-MQHRDRXXXXXXXXXXXXXXXXXXXXXXXXXXV--SE----DKDLHFGLLLAANYLE 112
K ++ ++ SE D+ F L+LAANYL
Sbjct: 61 KRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLN 120
Query: 113 IPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
I LLD CQ AD++KGKTPEEIR+TFNIK DFTPEEE+ V E+ WA
Sbjct: 121 IKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWA 169
>TAIR|locus:2124281 [details] [associations]
symbol:SK11 "AT4G34210" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 EMBL:AL021961
EMBL:AL161585 HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:DQ446893 EMBL:DQ653243 IPI:IPI00541308
PIR:T05415 RefSeq:NP_567959.1 UniGene:At.54598
ProteinModelPortal:O49484 SMR:O49484 IntAct:O49484 STRING:O49484
EnsemblPlants:AT4G34210.1 GeneID:829569 KEGG:ath:AT4G34210
TAIR:At4g34210 InParanoid:O49484 OMA:HHVDEAN PhylomeDB:O49484
ProtClustDB:CLSN2689755 Genevestigator:O49484 Uniprot:O49484
Length = 152
Score = 214 (80.4 bits), Expect = 8.6e-30, Sum P(2) = 8.6e-30
Identities = 41/60 (68%), Positives = 48/60 (80%)
Query: 102 FGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
F L+LAANYL I +LLD CQ AD++KGKTPEEIR TFNI+ DFTPEEE+AV E+ WA
Sbjct: 91 FELILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWA 150
Score = 131 (51.2 bits), Expect = 8.6e-30, Sum P(2) = 8.6e-30
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 3 TTSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDA-ADGEIPV-QISSRNLAKIVEWCK 60
++ + L SSD + FEVE+ V IQS TI +M+EDD ADG IP+ + S+ L K++E+CK
Sbjct: 2 SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADG-IPLANVESKILVKVIEYCK 60
Query: 61 CMQHRD 66
H D
Sbjct: 61 -KHHVD 65
>TAIR|locus:2139504 [details] [associations]
symbol:SK12 "AT4G34470" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 EMBL:AL161585
EMBL:AL023094 HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 ProtClustDB:CLSN2689755 IPI:IPI00526402 PIR:T05267
RefSeq:NP_567967.1 UniGene:At.65453 ProteinModelPortal:O65674
SMR:O65674 IntAct:O65674 STRING:O65674 EnsemblPlants:AT4G34470.1
GeneID:829598 KEGG:ath:AT4G34470 TAIR:At4g34470 InParanoid:O65674
OMA:IRRAFNI PhylomeDB:O65674 Genevestigator:O65674 Uniprot:O65674
Length = 152
Score = 210 (79.0 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 40/60 (66%), Positives = 47/60 (78%)
Query: 102 FGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
F L+LAANYL I +L D CQ AD++KGKTPEEIR TFNI+ DFTPEEE+AV E+ WA
Sbjct: 91 FELILAANYLNIKSLFDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWA 150
Score = 130 (50.8 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 29/60 (48%), Positives = 42/60 (70%)
Query: 3 TTSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDA-ADGEIPV-QISSRNLAKIVEWCK 60
++ + L SSD + FEVE+ V IQS TI +M+EDD ADG IP+ + S+ L K++E+CK
Sbjct: 2 SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADG-IPLANVESKILVKVIEYCK 60
>TAIR|locus:2204435 [details] [associations]
symbol:SKP1 "AT1G75950" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA;NAS]
[GO:0005737 "cytoplasm" evidence=NAS] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007140 "male meiosis" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=TAS] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0045910 "negative regulation of DNA recombination"
evidence=IMP] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0000226 "microtubule cytoskeleton organization"
evidence=IMP] [GO:0007067 "mitosis" evidence=RCA;TAS] [GO:0042023
"DNA endoreduplication" evidence=RCA] [GO:0042752 "regulation of
circadian rhythm" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0007275 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005634 GO:GO:0046686 GO:GO:0019048
GO:GO:0007059 GO:GO:0000226 GO:GO:0009734 GO:GO:0009873
GO:GO:0005819 EMBL:AC007396 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 eggNOG:COG5201
HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GO:GO:0009524 GO:GO:0045910
PDB:3OGK PDB:3OGL PDB:3OGM PDBsum:3OGK PDBsum:3OGL PDBsum:3OGM
PDB:2P1N PDB:2P1O PDB:2P1Q PDBsum:2P1N PDBsum:2P1O PDBsum:2P1Q
EMBL:U60981 EMBL:U97020 EMBL:AF059294 EMBL:AY080884 EMBL:AY113971
EMBL:U70034 IPI:IPI00540205 PIR:T51309 RefSeq:NP_565123.1
UniGene:At.23531 PDB:2P1M PDB:2P1P PDB:3C6N PDB:3C6O PDB:3C6P
PDBsum:2P1M PDBsum:2P1P PDBsum:3C6N PDBsum:3C6O PDBsum:3C6P
ProteinModelPortal:Q39255 SMR:Q39255 DIP:DIP-31325N IntAct:Q39255
STRING:Q39255 PaxDb:Q39255 PRIDE:Q39255 EnsemblPlants:AT1G75950.1
GeneID:843928 KEGG:ath:AT1G75950 GeneFarm:4981 TAIR:At1g75950
InParanoid:Q39255 OMA:DDLKAWD PhylomeDB:Q39255
EvolutionaryTrace:Q39255 Genevestigator:Q39255 GermOnline:AT1G75950
Uniprot:Q39255
Length = 160
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 69/156 (44%), Positives = 93/156 (59%)
Query: 7 VKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPV-QISSRNLAKIVEWCKCMQHR 65
+ L+SSD E FEVE+ V ++S TI +M+EDD D +P+ ++S+ LAK++E+CK +H
Sbjct: 6 IVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCK--RHV 63
Query: 66 DRXXXXXXXXXXXXXXXXXXXXXXXXXXVSEDKDLHFGLLLAANYLEIPALLDRLCQLAA 125
+ + D+ F L+LAANYL I LLD CQ A
Sbjct: 64 E-AAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVA 122
Query: 126 DIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
D++KGKTPEEIR TFNIK DFTPEEE+ V E+ WA
Sbjct: 123 DMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWA 158
>DICTYBASE|DDB_G0269230 [details] [associations]
symbol:fpaA "ubiquitin ligase subunit SKP1"
species:44689 "Dictyostelium discoideum" [GO:0005515 "protein
binding" evidence=IPI] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0005938 "cell cortex" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016567 "protein ubiquitination"
evidence=TAS] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 dictyBase:DDB_G0269230
GO:GO:0005938 GO:GO:0005634 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0030587 GO:GO:0006511
GO:GO:0019005 eggNOG:COG5201 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:U18063
EMBL:U73685 PIR:A55969 RefSeq:XP_646453.1 ProteinModelPortal:P52285
SMR:P52285 IntAct:P52285 GlycoSuiteDB:P52285 PRIDE:P52285
EnsemblProtists:DDB0191107 GeneID:8617413 KEGG:ddi:DDB_G0269230
OMA:KNWDADF ProtClustDB:CLSZ2729221 Uniprot:P52285
Length = 162
Score = 194 (73.4 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 36/64 (56%), Positives = 48/64 (75%)
Query: 97 DKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMD 156
D+ F L+LAANYL+I LLD C+ A++++GKTPEEIR+ FNIK DFTPEEE+ +
Sbjct: 92 DQPTLFELILAANYLDIKPLLDVTCKTVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRK 151
Query: 157 EHGW 160
E+ W
Sbjct: 152 ENEW 155
Score = 129 (50.5 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 27/58 (46%), Positives = 41/58 (70%)
Query: 5 STVKLRSSDNEVFEVEKQVMIQSGTIRNMIED-DAADGEIPV-QISSRNLAKIVEWCK 60
S VKL SSD +VFE+EK++ S TI+NMIED +D IP+ ++S L K++++C+
Sbjct: 2 SLVKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDSPIPLPNVTSTILEKVLDYCR 59
>DICTYBASE|DDB_G0273615 [details] [associations]
symbol:fpaB-2 "ubiquitin ligase subunit SKP1"
species:44689 "Dictyostelium discoideum" [GO:0030587 "sorocarp
development" evidence=IMP] [GO:0005938 "cell cortex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0016567 "protein
ubiquitination" evidence=TAS] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 dictyBase:DDB_G0273615
dictyBase:DDB_G0273251 GO:GO:0005938 GO:GO:0005634
GenomeReviews:CM000151_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0030587 EMBL:AAFI02000011
EMBL:AAFI02000009 GO:GO:0006511 GO:GO:0019005 HSSP:P63208
eggNOG:COG5201 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 PIR:A55969
ProtClustDB:CLSZ2729221 EMBL:U73686 RefSeq:XP_644424.1
RefSeq:XP_644826.1 ProteinModelPortal:Q557E4 SMR:Q557E4
PRIDE:Q557E4 EnsemblProtists:DDB0185043 EnsemblProtists:DDB0266780
GeneID:8618928 GeneID:8619049 KEGG:ddi:DDB_G0273251
KEGG:ddi:DDB_G0273615 OMA:VIQWCTY Uniprot:Q557E4
Length = 162
Score = 194 (73.4 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 36/64 (56%), Positives = 48/64 (75%)
Query: 97 DKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMD 156
D+ F L+LAANYL+I LLD C+ A++++GKTPEEIR+ FNIK DFTPEEE+ +
Sbjct: 92 DQPTLFELILAANYLDIKPLLDVTCKTVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRK 151
Query: 157 EHGW 160
E+ W
Sbjct: 152 ENEW 155
Score = 129 (50.5 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 27/58 (46%), Positives = 41/58 (70%)
Query: 5 STVKLRSSDNEVFEVEKQVMIQSGTIRNMIED-DAADGEIPV-QISSRNLAKIVEWCK 60
S VKL SSD +VFE+EK++ S TI+NMIED +D IP+ ++S L K++++C+
Sbjct: 2 SLVKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDAPIPLPNVTSTILEKVLDYCR 59
>DICTYBASE|DDB_G0273251 [details] [associations]
symbol:fpaB-1 "ubiquitin ligase subunit SKP1"
species:44689 "Dictyostelium discoideum" [GO:0030587 "sorocarp
development" evidence=IMP] [GO:0005938 "cell cortex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0016567 "protein
ubiquitination" evidence=TAS] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 dictyBase:DDB_G0273615
dictyBase:DDB_G0273251 GO:GO:0005938 GO:GO:0005634
GenomeReviews:CM000151_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0030587 EMBL:AAFI02000011
EMBL:AAFI02000009 GO:GO:0006511 GO:GO:0019005 HSSP:P63208
eggNOG:COG5201 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 PIR:A55969
ProtClustDB:CLSZ2729221 EMBL:U73686 RefSeq:XP_644424.1
RefSeq:XP_644826.1 ProteinModelPortal:Q557E4 SMR:Q557E4
PRIDE:Q557E4 EnsemblProtists:DDB0185043 EnsemblProtists:DDB0266780
GeneID:8618928 GeneID:8619049 KEGG:ddi:DDB_G0273251
KEGG:ddi:DDB_G0273615 OMA:VIQWCTY Uniprot:Q557E4
Length = 162
Score = 194 (73.4 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 36/64 (56%), Positives = 48/64 (75%)
Query: 97 DKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMD 156
D+ F L+LAANYL+I LLD C+ A++++GKTPEEIR+ FNIK DFTPEEE+ +
Sbjct: 92 DQPTLFELILAANYLDIKPLLDVTCKTVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRK 151
Query: 157 EHGW 160
E+ W
Sbjct: 152 ENEW 155
Score = 129 (50.5 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 27/58 (46%), Positives = 41/58 (70%)
Query: 5 STVKLRSSDNEVFEVEKQVMIQSGTIRNMIED-DAADGEIPV-QISSRNLAKIVEWCK 60
S VKL SSD +VFE+EK++ S TI+NMIED +D IP+ ++S L K++++C+
Sbjct: 2 SLVKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDAPIPLPNVTSTILEKVLDYCR 59
>TAIR|locus:2198621 [details] [associations]
symbol:SK4 "AT1G20140" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005737 GO:GO:0005730
GO:GO:0016567 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 GO:GO:0019005 EMBL:AC022472 HSSP:P63208
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
UniGene:At.26484 ProtClustDB:CLSN2687877 EMBL:AY058205
EMBL:AY098980 IPI:IPI00526578 PIR:B86335 RefSeq:NP_564105.1
UniGene:At.26612 ProteinModelPortal:Q9LNT9 SMR:Q9LNT9 IntAct:Q9LNT9
STRING:Q9LNT9 PRIDE:Q9LNT9 EnsemblPlants:AT1G20140.1 GeneID:838604
KEGG:ath:AT1G20140 TAIR:At1g20140 InParanoid:Q9LNT9 OMA:SAENDEL
Genevestigator:Q9LNT9 Uniprot:Q9LNT9
Length = 163
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 66/160 (41%), Positives = 92/160 (57%)
Query: 3 TTSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPV-QISSRNLAKIVEWCKC 61
T + L+SSD E FE+E+ V ++S TI++MIEDD AD IP+ ++ LAK++E+CK
Sbjct: 4 TKKMIILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCK- 62
Query: 62 MQHRDRXXXXXXXXXXXXXXXXXXXXXXXXXXVSEDKDLHFGLLLAANYLEIPALLDRLC 121
+H + V D+ F L+LAANYL I LLD C
Sbjct: 63 -KHVEAAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLILAANYLNIGGLLDLTC 121
Query: 122 QLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
+ AD ++GKTPE++R FNIK D+TPEEE V +E+ WA
Sbjct: 122 KAVADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWA 161
>MGI|MGI:103575 [details] [associations]
symbol:Skp1a "S-phase kinase-associated protein 1A"
species:10090 "Mus musculus" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO;IC] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=ISO;IC] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO;IDA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO;IDA]
[GO:0035518 "histone H2A monoubiquitination" evidence=ISO]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
MGI:MGI:103575 GO:GO:0005829 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0019005 GO:GO:0004842 eggNOG:COG5201
HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GO:GO:0035518 GO:GO:0031519
GO:GO:0031146 OMA:VIQWCTY GeneTree:ENSGT00390000012652
HOVERGEN:HBG057008 OrthoDB:EOG498V26 ChiTaRS:SKP1 EMBL:AF083214
EMBL:AK002983 EMBL:AK010628 EMBL:AK012498 EMBL:AK014245
EMBL:AK027909 EMBL:AK078330 EMBL:AK088339 EMBL:BC002115
IPI:IPI00331163 RefSeq:NP_035673.3 UniGene:Mm.42944
ProteinModelPortal:Q9WTX5 SMR:Q9WTX5 IntAct:Q9WTX5 STRING:Q9WTX5
PhosphoSite:Q9WTX5 REPRODUCTION-2DPAGE:Q9WTX5 PaxDb:Q9WTX5
PRIDE:Q9WTX5 Ensembl:ENSMUST00000037324 Ensembl:ENSMUST00000109072
GeneID:21402 KEGG:mmu:21402 CTD:21402 InParanoid:Q9WTX5
NextBio:300668 Bgee:Q9WTX5 CleanEx:MM_SKP1A Genevestigator:Q9WTX5
GermOnline:ENSMUSG00000036309 Uniprot:Q9WTX5
Length = 163
Score = 195 (73.7 bits), Expect = 7.4e-27, Sum P(2) = 7.4e-27
Identities = 38/64 (59%), Positives = 47/64 (73%)
Query: 97 DKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMD 156
D+ F L+LAANYL+I LLD C+ A+++KGKTPEEIR+TFNIK DFT EEE V
Sbjct: 96 DQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRK 155
Query: 157 EHGW 160
E+ W
Sbjct: 156 ENQW 159
Score = 122 (48.0 bits), Expect = 7.4e-27, Sum P(2) = 7.4e-27
Identities = 28/67 (41%), Positives = 42/67 (62%)
Query: 6 TVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGE---IPVQISSRNLA---KIVEWC 59
T+KL+SSD E+FEV+ ++ QS TI+ M+ED D E PV + + N A K+++WC
Sbjct: 3 TIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 60 KCMQHRD 66
H+D
Sbjct: 63 T--HHKD 67
>RGD|1359648 [details] [associations]
symbol:Skp1 "S-phase kinase-associated protein 1" species:10116
"Rattus norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=ISO;ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;ISS] [GO:0031519 "PcG protein
complex" evidence=IEA;ISO] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA;ISO] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 RGD:1359648 GO:GO:0005829
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0019005
GO:GO:0004842 eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:0035518 GO:GO:0031519 GO:GO:0031146
OMA:VIQWCTY CTD:6500 GeneTree:ENSGT00390000012652
HOVERGEN:HBG057008 OrthoDB:EOG498V26 EMBL:BC058152 IPI:IPI00369350
RefSeq:NP_001007609.1 UniGene:Rn.3477 ProteinModelPortal:Q6PEC4
SMR:Q6PEC4 DIP:DIP-29863N IntAct:Q6PEC4 STRING:Q6PEC4
PhosphoSite:Q6PEC4 PRIDE:Q6PEC4 Ensembl:ENSRNOT00000007676
GeneID:287280 KEGG:rno:287280 UCSC:RGD:1359648 InParanoid:Q6PEC4
NextBio:625795 ArrayExpress:Q6PEC4 Genevestigator:Q6PEC4
GermOnline:ENSRNOG00000005828 Uniprot:Q6PEC4
Length = 163
Score = 195 (73.7 bits), Expect = 7.4e-27, Sum P(2) = 7.4e-27
Identities = 38/64 (59%), Positives = 47/64 (73%)
Query: 97 DKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMD 156
D+ F L+LAANYL+I LLD C+ A+++KGKTPEEIR+TFNIK DFT EEE V
Sbjct: 96 DQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRK 155
Query: 157 EHGW 160
E+ W
Sbjct: 156 ENQW 159
Score = 122 (48.0 bits), Expect = 7.4e-27, Sum P(2) = 7.4e-27
Identities = 28/67 (41%), Positives = 42/67 (62%)
Query: 6 TVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGE---IPVQISSRNLA---KIVEWC 59
T+KL+SSD E+FEV+ ++ QS TI+ M+ED D E PV + + N A K+++WC
Sbjct: 3 TIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 60 KCMQHRD 66
H+D
Sbjct: 63 T--HHKD 67
>ZFIN|ZDB-GENE-040426-1707 [details] [associations]
symbol:skp1 "S-phase kinase-associated protein 1"
species:7955 "Danio rerio" [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0016310 "phosphorylation"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 ZFIN:ZDB-GENE-040426-1707
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0016301
GO:GO:0006511 eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 OMA:KNWDADF CTD:6500 GeneTree:ENSGT00390000012652
HOVERGEN:HBG057008 OrthoDB:EOG498V26 EMBL:FP017197 EMBL:BC059536
EMBL:AY648843 IPI:IPI00501108 RefSeq:NP_957037.1 UniGene:Dr.83245
SMR:Q6PBY8 STRING:Q6PBY8 Ensembl:ENSDART00000008454 GeneID:393716
KEGG:dre:393716 InParanoid:Q6PBY8 NextBio:20814718 Uniprot:Q6PBY8
Length = 163
Score = 195 (73.7 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 38/64 (59%), Positives = 47/64 (73%)
Query: 97 DKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMD 156
D+ F L+LAANYL+I LLD C+ A+++KGKTPEEIR+TFNIK DFT EEE V
Sbjct: 96 DQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRK 155
Query: 157 EHGW 160
E+ W
Sbjct: 156 ENQW 159
Score = 120 (47.3 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 28/67 (41%), Positives = 42/67 (62%)
Query: 6 TVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGE---IPVQISSRNLA---KIVEWC 59
T+KL+SSD E+FEV+ ++ QS TI+ M+ED D E PV + + N A K+++WC
Sbjct: 3 TIKLQSSDGEMFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 60 KCMQHRD 66
H+D
Sbjct: 63 T--HHKD 67
>UNIPROTKB|Q5ZKF5 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9031 "Gallus gallus" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=IEA] [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=ISS] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
UniPathway:UPA00143 GO:GO:0005829 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 GO:GO:0019005
GO:GO:0004842 HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:0035518 GO:GO:0031519 OMA:VIQWCTY CTD:6500
GeneTree:ENSGT00390000012652 HOVERGEN:HBG057008 OrthoDB:EOG498V26
EMBL:AJ720129 IPI:IPI00591045 RefSeq:NP_001006153.1
UniGene:Gga.1718 ProteinModelPortal:Q5ZKF5 SMR:Q5ZKF5 STRING:Q5ZKF5
PRIDE:Q5ZKF5 Ensembl:ENSGALT00000010461 GeneID:416319
KEGG:gga:416319 InParanoid:Q5ZKF5 NextBio:20819793 Uniprot:Q5ZKF5
Length = 163
Score = 195 (73.7 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 38/64 (59%), Positives = 47/64 (73%)
Query: 97 DKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMD 156
D+ F L+LAANYL+I LLD C+ A+++KGKTPEEIR+TFNIK DFT EEE V
Sbjct: 96 DQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRK 155
Query: 157 EHGW 160
E+ W
Sbjct: 156 ENQW 159
Score = 118 (46.6 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 6 TVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGE---IPVQISSRNLA---KIVEWC 59
++KL+SSD E+FEV+ ++ QS TI+ M+ED D E PV + + N A K+++WC
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 60 KCMQHRD 66
H+D
Sbjct: 63 T--HHKD 67
>UNIPROTKB|Q3ZCF3 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9913 "Bos taurus" [GO:0005829 "cytosol" evidence=ISS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
UniPathway:UPA00143 GO:GO:0005829 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0019005 GO:GO:0004842
HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:0035518 GO:GO:0031519 GO:GO:0031146
OMA:VIQWCTY EMBL:BT029901 EMBL:BC102435 IPI:IPI00699118
RefSeq:NP_001029953.1 UniGene:Bt.87240 ProteinModelPortal:Q3ZCF3
SMR:Q3ZCF3 STRING:Q3ZCF3 PRIDE:Q3ZCF3 Ensembl:ENSBTAT00000035306
GeneID:615427 KEGG:bta:615427 CTD:6500 GeneTree:ENSGT00390000012652
HOVERGEN:HBG057008 InParanoid:Q3ZCF3 OrthoDB:EOG498V26
NextBio:20899611 Uniprot:Q3ZCF3
Length = 163
Score = 195 (73.7 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 38/64 (59%), Positives = 47/64 (73%)
Query: 97 DKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMD 156
D+ F L+LAANYL+I LLD C+ A+++KGKTPEEIR+TFNIK DFT EEE V
Sbjct: 96 DQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRK 155
Query: 157 EHGW 160
E+ W
Sbjct: 156 ENQW 159
Score = 118 (46.6 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 6 TVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGE---IPVQISSRNLA---KIVEWC 59
++KL+SSD E+FEV+ ++ QS TI+ M+ED D E PV + + N A K+++WC
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 60 KCMQHRD 66
H+D
Sbjct: 63 T--HHKD 67
>UNIPROTKB|P63208 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9606 "Homo sapiens" [GO:0005515 "protein binding"
evidence=IPI] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0035518
"histone H2A monoubiquitination" evidence=IDA] [GO:0031519 "PcG
protein complex" evidence=IDA] [GO:0000080 "G1 phase of mitotic
cell cycle" evidence=TAS] [GO:0000082 "G1/S transition of mitotic
cell cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell
cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0007219 "Notch signaling pathway" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0051437 "positive regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051439
"regulation of ubiquitin-protein ligase activity involved in
mitotic cell cycle" evidence=TAS] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0016032 EMBL:CH471062
GO:GO:0000082 GO:GO:0007219 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0019005 GO:GO:0004842 GO:GO:0000084
GO:GO:0031145 GO:GO:0051437 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:0000080 GO:GO:0035518 Reactome:REACT_24941
GO:GO:0031146 PDB:2AST PDBsum:2AST PDB:2ASS PDBsum:2ASS PDB:1P22
PDBsum:1P22 PDB:1LDK PDBsum:1LDK PDB:2E31 PDB:2E32 PDBsum:2E31
PDBsum:2E32 PDB:3L2O PDBsum:3L2O PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR OMA:VIQWCTY CTD:6500
HOVERGEN:HBG057008 OrthoDB:EOG498V26 EMBL:U33760 EMBL:Z47087
EMBL:BC009839 EMBL:BC020798 EMBL:BC025673 EMBL:BC065730 EMBL:U37558
IPI:IPI00172421 IPI:IPI00301364 PIR:I39170 RefSeq:NP_008861.2
RefSeq:NP_733779.1 UniGene:Hs.171626 PDB:1FQV PDB:1FS1 PDB:1FS2
PDBsum:1FQV PDBsum:1FS1 PDBsum:1FS2 ProteinModelPortal:P63208
SMR:P63208 DIP:DIP-31606N IntAct:P63208 MINT:MINT-5001195
STRING:P63208 PhosphoSite:P63208 DMDM:52783797 SWISS-2DPAGE:P63208
PaxDb:P63208 PeptideAtlas:P63208 PRIDE:P63208 DNASU:6500
Ensembl:ENST00000353411 Ensembl:ENST00000517625
Ensembl:ENST00000522552 Ensembl:ENST00000522855 GeneID:6500
KEGG:hsa:6500 UCSC:uc003kzc.4 UCSC:uc003kzd.4 GeneCards:GC05M133521
H-InvDB:HIX0129723 HGNC:HGNC:10899 HPA:CAB012982 MIM:601434
neXtProt:NX_P63208 PharmGKB:PA162403424 InParanoid:P63208
PhylomeDB:P63208 ChiTaRS:SKP1 EvolutionaryTrace:P63208
GenomeRNAi:6500 NextBio:25267 ArrayExpress:P63208 Bgee:P63208
CleanEx:HS_SKP1 Genevestigator:P63208 GermOnline:ENSG00000113558
Uniprot:P63208
Length = 163
Score = 195 (73.7 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 38/64 (59%), Positives = 47/64 (73%)
Query: 97 DKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMD 156
D+ F L+LAANYL+I LLD C+ A+++KGKTPEEIR+TFNIK DFT EEE V
Sbjct: 96 DQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRK 155
Query: 157 EHGW 160
E+ W
Sbjct: 156 ENQW 159
Score = 118 (46.6 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 6 TVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGE---IPVQISSRNLA---KIVEWC 59
++KL+SSD E+FEV+ ++ QS TI+ M+ED D E PV + + N A K+++WC
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 60 KCMQHRD 66
H+D
Sbjct: 63 T--HHKD 67
>UNIPROTKB|P63209 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:10141 "Cavia porcellus" [GO:0005829 "cytosol" evidence=ISS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0019005
eggNOG:COG5201 HOGENOM:HOG000172184 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 GO:GO:0031146
CTD:6500 HOVERGEN:HBG057008 OrthoDB:EOG498V26 EMBL:Z35481
PIR:A57630 RefSeq:NP_001166486.1 ProteinModelPortal:P63209
SMR:P63209 MINT:MINT-108497 STRING:P63209 PRIDE:P63209
GeneID:100135616 InParanoid:P63209 Uniprot:P63209
Length = 163
Score = 195 (73.7 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 38/64 (59%), Positives = 47/64 (73%)
Query: 97 DKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMD 156
D+ F L+LAANYL+I LLD C+ A+++KGKTPEEIR+TFNIK DFT EEE V
Sbjct: 96 DQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRK 155
Query: 157 EHGW 160
E+ W
Sbjct: 156 ENQW 159
Score = 118 (46.6 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 6 TVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGE---IPVQISSRNLA---KIVEWC 59
++KL+SSD E+FEV+ ++ QS TI+ M+ED D E PV + + N A K+++WC
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 60 KCMQHRD 66
H+D
Sbjct: 63 T--HHKD 67
>UNIPROTKB|Q4R5B9 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9541 "Macaca fascicularis" [GO:0005829 "cytosol"
evidence=ISS] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=ISS] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005829 GO:GO:0016567 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0019005 HSSP:P63208 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 GO:GO:0031146
HOVERGEN:HBG057008 EMBL:AB169346 EMBL:AB169625
ProteinModelPortal:Q4R5B9 SMR:Q4R5B9 PRIDE:Q4R5B9 Uniprot:Q4R5B9
Length = 163
Score = 195 (73.7 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 38/64 (59%), Positives = 47/64 (73%)
Query: 97 DKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMD 156
D+ F L+LAANYL+I LLD C+ A+++KGKTPEEIR+TFNIK DFT EEE V
Sbjct: 96 DQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRK 155
Query: 157 EHGW 160
E+ W
Sbjct: 156 ENQW 159
Score = 118 (46.6 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 6 TVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGE---IPVQISSRNLA---KIVEWC 59
++KL+SSD E+FEV+ ++ QS TI+ M+ED D E PV + + N A K+++WC
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 60 KCMQHRD 66
H+D
Sbjct: 63 T--HHKD 67
>UNIPROTKB|Q5R512 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9601 "Pongo abelii" [GO:0005829 "cytosol" evidence=ISS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0019005
HSSP:P63208 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GO:GO:0031146 OMA:VIQWCTY
CTD:6500 GeneTree:ENSGT00390000012652 HOVERGEN:HBG057008
EMBL:CR860371 EMBL:CR861073 RefSeq:NP_001127637.1 UniGene:Pab.18558
ProteinModelPortal:Q5R512 SMR:Q5R512 PRIDE:Q5R512
Ensembl:ENSPPYT00000018360 GeneID:100174716 KEGG:pon:100174716
InParanoid:Q5R512 Uniprot:Q5R512
Length = 163
Score = 195 (73.7 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 38/64 (59%), Positives = 47/64 (73%)
Query: 97 DKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMD 156
D+ F L+LAANYL+I LLD C+ A+++KGKTPEEIR+TFNIK DFT EEE V
Sbjct: 96 DQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRK 155
Query: 157 EHGW 160
E+ W
Sbjct: 156 ENQW 159
Score = 118 (46.6 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 6 TVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGE---IPVQISSRNLA---KIVEWC 59
++KL+SSD E+FEV+ ++ QS TI+ M+ED D E PV + + N A K+++WC
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 60 KCMQHRD 66
H+D
Sbjct: 63 T--HHKD 67
>UNIPROTKB|Q71U00 [details] [associations]
symbol:skp1 "S-phase kinase-associated protein 1"
species:8355 "Xenopus laevis" [GO:0005515 "protein binding"
evidence=IPI] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=ISS] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
UniPathway:UPA00143 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 GO:GO:0019005
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 CTD:6500 HOVERGEN:HBG057008 EMBL:AF176352
EMBL:AF169342 EMBL:BC054184 RefSeq:NP_001080844.1 UniGene:Xl.57174
ProteinModelPortal:Q71U00 SMR:Q71U00 IntAct:Q71U00 PRIDE:Q71U00
GeneID:380538 KEGG:xla:380538 Xenbase:XB-GENE-919643 Uniprot:Q71U00
Length = 163
Score = 195 (73.7 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 38/64 (59%), Positives = 47/64 (73%)
Query: 97 DKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMD 156
D+ F L+LAANYL+I LLD C+ A+++KGKTPEEIR+TFNIK DFT EEE V
Sbjct: 96 DQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRK 155
Query: 157 EHGW 160
E+ W
Sbjct: 156 ENQW 159
Score = 118 (46.6 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 6 TVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGE---IPVQISSRNLA---KIVEWC 59
++KL+SSD E+FEV+ ++ QS TI+ M+ED D E PV + + N A K+++WC
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 60 KCMQHRD 66
H+D
Sbjct: 63 T--HHKD 67
>UNIPROTKB|E2RRW0 [details] [associations]
symbol:SKP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=IEA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
GO:GO:0005829 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 GO:GO:0019005 GO:GO:0004842 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 GO:GO:0035518
GO:GO:0031519 GeneTree:ENSGT00390000012652 OMA:IMNILEV
EMBL:AAEX03007782 Ensembl:ENSCAFT00000001535 Uniprot:E2RRW0
Length = 163
Score = 195 (73.7 bits), Expect = 4.0e-26, Sum P(2) = 4.0e-26
Identities = 38/64 (59%), Positives = 47/64 (73%)
Query: 97 DKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMD 156
D+ F L+LAANYL+I LLD C+ A+++KGKTPEEIR+TFNIK DFT EEE V
Sbjct: 96 DQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRK 155
Query: 157 EHGW 160
E+ W
Sbjct: 156 ENQW 159
Score = 115 (45.5 bits), Expect = 4.0e-26, Sum P(2) = 4.0e-26
Identities = 27/67 (40%), Positives = 41/67 (61%)
Query: 6 TVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGE---IPVQISSRNLA---KIVEWC 59
++KL SSD E+FEV+ ++ QS TI+ M+ED D E PV + + N A K+++WC
Sbjct: 3 SIKLPSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 60 KCMQHRD 66
H+D
Sbjct: 63 T--HHKD 67
>TAIR|locus:2050281 [details] [associations]
symbol:SK3 "AT2G25700" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 HSSP:P63208
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:AC006053
EMBL:AY052700 EMBL:AY139806 IPI:IPI00526397 PIR:F84651
RefSeq:NP_565604.1 UniGene:At.26484 ProteinModelPortal:Q9SL93
SMR:Q9SL93 IntAct:Q9SL93 STRING:Q9SL93 EnsemblPlants:AT2G25700.1
GeneID:817111 KEGG:ath:AT2G25700 TAIR:At2g25700 InParanoid:Q9SL93
OMA:CCKTIAN ProtClustDB:CLSN2687877 Genevestigator:Q9SL93
Uniprot:Q9SL93
Length = 163
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 65/160 (40%), Positives = 88/160 (55%)
Query: 3 TTSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPV-QISSRNLAKIVEWCKC 61
T + L+SSD E FEVE+ V ++S TI++MIEDD D IP+ ++ LAK++E+CK
Sbjct: 4 TKKMIILKSSDGESFEVEEAVAVESQTIKHMIEDDCVDNGIPLPNVTGAILAKVIEYCK- 62
Query: 62 MQHRDRXXXXXXXXXXXXXXXXXXXXXXXXXXVSEDKDLHFGLLLAANYLEIPALLDRLC 121
+H + V D F LL AANYL I LLD C
Sbjct: 63 -KHVEAAAEAGGDKDFYGSTENHELKTWDNDFVKVDHPTLFDLLRAANYLNISGLLDLTC 121
Query: 122 QLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
+ AD ++GKTP ++R FNIK D+TPEEE V +E+ WA
Sbjct: 122 KAVADQMRGKTPAQMREHFNIKNDYTPEEEAEVRNENRWA 161
>TAIR|locus:2056956 [details] [associations]
symbol:SK14 "AT2G03170" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 HSSP:P63208
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:AC005313
EMBL:DQ056526 IPI:IPI00517714 PIR:T02709 RefSeq:NP_565296.1
UniGene:At.52615 ProteinModelPortal:O81057 SMR:O81057 IntAct:O81057
STRING:O81057 PaxDb:O81057 PRIDE:O81057 EnsemblPlants:AT2G03170.1
GeneID:814846 KEGG:ath:AT2G03170 TAIR:At2g03170 InParanoid:O81057
OMA:KTWDEEF PhylomeDB:O81057 ProtClustDB:CLSN2687939
Genevestigator:O81057 Uniprot:O81057
Length = 149
Score = 191 (72.3 bits), Expect = 4.4e-25, Sum P(2) = 4.4e-25
Identities = 40/65 (61%), Positives = 44/65 (67%)
Query: 97 DKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMD 156
D+ F LLLAANYL I LLD Q AD +K KTPEEIR FNI+ DFTPEEE AV
Sbjct: 83 DQPTVFQLLLAANYLNIKGLLDLSAQTVADRIKDKTPEEIREIFNIENDFTPEEEAAVRK 142
Query: 157 EHGWA 161
E+ WA
Sbjct: 143 ENAWA 147
Score = 109 (43.4 bits), Expect = 4.4e-25, Sum P(2) = 4.4e-25
Identities = 23/59 (38%), Positives = 39/59 (66%)
Query: 3 TTSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPVQ-ISSRNLAKIVEWCK 60
+++ + L SSD E FEVE+ V + + +MIEDD E+P+Q ++ + L+ +VE+CK
Sbjct: 2 SSNKIVLSSSDGESFEVEEAVARKLKIVEHMIEDDCVVTEVPLQNVTGKILSIVVEYCK 60
>UNIPROTKB|E5RJR5 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 HGNC:HGNC:10899 ChiTaRS:SKP1
EMBL:AC104109 EMBL:AC011336 IPI:IPI00974176
ProteinModelPortal:E5RJR5 SMR:E5RJR5 Ensembl:ENST00000521216
ArrayExpress:E5RJR5 Bgee:E5RJR5 Uniprot:E5RJR5
Length = 163
Score = 181 (68.8 bits), Expect = 5.6e-25, Sum P(2) = 5.6e-25
Identities = 35/56 (62%), Positives = 42/56 (75%)
Query: 105 LLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGW 160
L AANYL+I LLD C+ A+++KGKTPEEIR+TFNIK DFT EEE V E+ W
Sbjct: 104 LQAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQW 159
Score = 118 (46.6 bits), Expect = 5.6e-25, Sum P(2) = 5.6e-25
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 6 TVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGE---IPVQISSRNLA---KIVEWC 59
++KL+SSD E+FEV+ ++ QS TI+ M+ED D E PV + + N A K+++WC
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 60 KCMQHRD 66
H+D
Sbjct: 63 T--HHKD 67
>UNIPROTKB|G3MZV0 [details] [associations]
symbol:G3MZV0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GeneTree:ENSGT00390000012652 OMA:IMNILEV
EMBL:DAAA02025649 PRIDE:G3MZV0 Ensembl:ENSBTAT00000063619
NextBio:20927407 Uniprot:G3MZV0
Length = 160
Score = 186 (70.5 bits), Expect = 7.1e-25, Sum P(2) = 7.1e-25
Identities = 37/64 (57%), Positives = 46/64 (71%)
Query: 97 DKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMD 156
D+ F L+LAANYL+I LLD C+ A+++KGKT EEIR+TFNIK DFT EEE V
Sbjct: 93 DQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTREEIRKTFNIKNDFTEEEEAQVRK 152
Query: 157 EHGW 160
E+ W
Sbjct: 153 ENQW 156
Score = 112 (44.5 bits), Expect = 7.1e-25, Sum P(2) = 7.1e-25
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 6 TVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGE---IPVQISSRNLAKIVEWCKCM 62
++KL+SSD E+FEV+ ++ QS TI+ ++ED D E PV + + N A + +WC
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTVLEDLGMDDEGDDDPVPLPNVNAAILKKWCT-- 60
Query: 63 QHRD 66
H+D
Sbjct: 61 HHKD 64
>UNIPROTKB|F8W8N3 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 HGNC:HGNC:10899 ChiTaRS:SKP1
EMBL:AC104109 EMBL:AC011336 IPI:IPI00985006
ProteinModelPortal:F8W8N3 SMR:F8W8N3 Ensembl:ENST00000328392
ArrayExpress:F8W8N3 Bgee:F8W8N3 Uniprot:F8W8N3
Length = 158
Score = 180 (68.4 bits), Expect = 7.1e-25, Sum P(2) = 7.1e-25
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 97 DKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEE 151
D+ F L+LAANYL+I LLD C+ A+++KGKTPEEIR+TFNIK DFT EEE
Sbjct: 96 DQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEE 150
Score = 118 (46.6 bits), Expect = 7.1e-25, Sum P(2) = 7.1e-25
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 6 TVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGE---IPVQISSRNLA---KIVEWC 59
++KL+SSD E+FEV+ ++ QS TI+ M+ED D E PV + + N A K+++WC
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 60 KCMQHRD 66
H+D
Sbjct: 63 T--HHKD 67
>TAIR|locus:2080532 [details] [associations]
symbol:SK13 "AT3G60010" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
EMBL:AL138647 HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 IPI:IPI00542124 PIR:T47825 RefSeq:NP_567090.1
UniGene:At.65295 ProteinModelPortal:Q9M1X5 SMR:Q9M1X5 IntAct:Q9M1X5
STRING:Q9M1X5 PaxDb:Q9M1X5 PRIDE:Q9M1X5 EnsemblPlants:AT3G60010.1
GeneID:825171 KEGG:ath:AT3G60010 TAIR:At3g60010 InParanoid:Q9M1X5
OMA:AVQSQTI PhylomeDB:Q9M1X5 ProtClustDB:CLSN2917465
Genevestigator:Q9M1X5 Uniprot:Q9M1X5
Length = 154
Score = 168 (64.2 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 33/66 (50%), Positives = 42/66 (63%)
Query: 96 EDKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVM 155
E F ++LAANYL I LLD CQ AD++ GK P+EIR I+ DFTPEEE+ +
Sbjct: 87 EQSSTLFDVMLAANYLNIKDLLDLGCQTVADMITGKKPDEIRALLGIENDFTPEEEEEIR 146
Query: 156 DEHGWA 161
E+ WA
Sbjct: 147 KENQWA 152
Score = 122 (48.0 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 7 VKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPV-QISSRNLAKIVEWCK 60
V L SSD E F+VE+ V +QS TI +MIEDD +P+ ++ L+K++E+CK
Sbjct: 5 VMLLSSDGESFQVEEAVAVQSQTIAHMIEDDCVANGVPIANVTGVILSKVIEYCK 59
>POMBASE|SPBC409.05 [details] [associations]
symbol:skp1 "SCF ubiquitin ligase complex subunit Skp1"
species:4896 "Schizosaccharomyces pombe" [GO:0000920 "cytokinetic
cell separation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006998 "nuclear envelope organization"
evidence=IMP] [GO:0007035 "vacuolar acidification" evidence=ISO]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IMP]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0042493
"response to drug" evidence=IGI] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IC] [GO:0043291 "RAVE complex" evidence=IPI]
[GO:0045841 "negative regulation of mitotic metaphase/anaphase
transition" evidence=IMP] [GO:0070072 "vacuolar proton-transporting
V-type ATPase complex assembly" evidence=TAS] [GO:2000060 "positive
regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 PomBase:SPBC409.05
GO:GO:0005829 GO:GO:0005634 GO:GO:0005773 GO:GO:0007095
GO:GO:0007067 GO:GO:0042493 EMBL:CU329671 GenomeReviews:CU329671_GR
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006998
GO:GO:0030163 GO:GO:0000920 GO:GO:0006511 GO:GO:0019005
GO:GO:0070072 HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:2000060 GO:GO:0007035 GO:GO:0045841
EMBL:AB027472 GO:GO:0043291 OMA:VIQWCTY OrthoDB:EOG4T1MX2
EMBL:AB067633 EMBL:AF071066 PIR:T45459 RefSeq:NP_595455.1
ProteinModelPortal:Q9Y709 SMR:Q9Y709 IntAct:Q9Y709 STRING:Q9Y709
EnsemblFungi:SPBC409.05.1 GeneID:2540917 KEGG:spo:SPBC409.05
NextBio:20802032 Uniprot:Q9Y709
Length = 161
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 58/160 (36%), Positives = 94/160 (58%)
Query: 5 STVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPV---QISSRNLAKIVEWCKC 61
S +KL SSDNE F V++ + +S I+NM+ED + +P+ +SS L K++EWC+
Sbjct: 2 SKIKLISSDNEEFVVDQLIAERSMLIKNMLED-VGEINVPIPLPNVSSNVLRKVLEWCE- 59
Query: 62 MQHRDRXXXXXXXXXXXXXXXXXXXXXXXXXXVSEDKDLHFGLLLAANYLEIPALLDRLC 121
H++ ++ D+++ F ++LA+NYL+I LLD C
Sbjct: 60 -HHKNDLYSGTEEESDIRLKKSTDIDEWDRKFMAVDQEMLFEIVLASNYLDIKPLLDTGC 118
Query: 122 QLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
+ A++++GK+PE+IR+TFNI DFTPEEE+ + E+ WA
Sbjct: 119 KTVANMIRGKSPEDIRKTFNIPNDFTPEEEEQIRKENEWA 158
>WB|WBGene00004807 [details] [associations]
symbol:skr-1 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0008406 "gonad development"
evidence=IMP] [GO:0016477 "cell migration" evidence=IMP]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0008340 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0016477 GO:GO:0008406 GO:GO:0002119 GO:GO:0016246
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0040035
GO:GO:0006511 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 OMA:VIQWCTY
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:Z81072 EMBL:Z81084
PIR:T21573 RefSeq:NP_492513.1 ProteinModelPortal:G5ECU1 SMR:G5ECU1
IntAct:G5ECU1 EnsemblMetazoa:F46A9.5.1 EnsemblMetazoa:F46A9.5.2
EnsemblMetazoa:F46A9.5.3 GeneID:172775 KEGG:cel:CELE_F46A9.5
CTD:172775 WormBase:F46A9.5 NextBio:876957 Uniprot:G5ECU1
Length = 176
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 63/162 (38%), Positives = 87/162 (53%)
Query: 7 VKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGE-------IPVQ-ISSRNLAKIVEW 58
+K+ SSDNE+F V + V+ S TI ++ D D E IPVQ +++ L K++ W
Sbjct: 16 IKISSSDNEIFLVPRNVIRLSNTINTLLMDLGLDDEEGTNAEPIPVQNVTASILKKVISW 75
Query: 59 CKCMQHRDRXXXXXXXXXXXXXXXXXXXXXXXXXXVSEDKDLHFGLLLAANYLEIPALLD 118
C H D + D+ F L+LAANYL+I LLD
Sbjct: 76 CN-HHHSDPISTEDSDNREKRTDDIGSWDVEF---LKVDQGTLFELILAANYLDIKGLLD 131
Query: 119 RLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGW 160
C+ A+++KGK+PEEIRRTFNIK DFTPEEE+ + E+ W
Sbjct: 132 VTCKTVANMIKGKSPEEIRRTFNIKNDFTPEEEEQIRKENAW 173
>UNIPROTKB|G5ECU1 [details] [associations]
symbol:skr-1 "Protein SKR-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0008340 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0016477 GO:GO:0008406 GO:GO:0002119 GO:GO:0016246
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0040035
GO:GO:0006511 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 OMA:VIQWCTY
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:Z81072 EMBL:Z81084
PIR:T21573 RefSeq:NP_492513.1 ProteinModelPortal:G5ECU1 SMR:G5ECU1
IntAct:G5ECU1 EnsemblMetazoa:F46A9.5.1 EnsemblMetazoa:F46A9.5.2
EnsemblMetazoa:F46A9.5.3 GeneID:172775 KEGG:cel:CELE_F46A9.5
CTD:172775 WormBase:F46A9.5 NextBio:876957 Uniprot:G5ECU1
Length = 176
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 63/162 (38%), Positives = 87/162 (53%)
Query: 7 VKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGE-------IPVQ-ISSRNLAKIVEW 58
+K+ SSDNE+F V + V+ S TI ++ D D E IPVQ +++ L K++ W
Sbjct: 16 IKISSSDNEIFLVPRNVIRLSNTINTLLMDLGLDDEEGTNAEPIPVQNVTASILKKVISW 75
Query: 59 CKCMQHRDRXXXXXXXXXXXXXXXXXXXXXXXXXXVSEDKDLHFGLLLAANYLEIPALLD 118
C H D + D+ F L+LAANYL+I LLD
Sbjct: 76 CN-HHHSDPISTEDSDNREKRTDDIGSWDVEF---LKVDQGTLFELILAANYLDIKGLLD 131
Query: 119 RLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGW 160
C+ A+++KGK+PEEIRRTFNIK DFTPEEE+ + E+ W
Sbjct: 132 VTCKTVANMIKGKSPEEIRRTFNIKNDFTPEEEEQIRKENAW 173
>TAIR|locus:2102370 [details] [associations]
symbol:SK15 "AT3G25650" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
GO:GO:0019005 EMBL:AP001313 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:DQ446700 IPI:IPI00519031 IPI:IPI00759250
RefSeq:NP_566773.1 UniGene:At.66493 ProteinModelPortal:Q1PEL7
SMR:Q1PEL7 IntAct:Q1PEL7 STRING:Q1PEL7 EnsemblPlants:AT3G25650.1
GeneID:822152 KEGG:ath:AT3G25650 TAIR:At3g25650 OMA:ENDFTHE
PhylomeDB:Q1PEL7 Genevestigator:Q1PEL7 Uniprot:Q1PEL7
Length = 177
Score = 177 (67.4 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
Identities = 35/66 (53%), Positives = 44/66 (66%)
Query: 97 DKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFT-PEEEKAVM 155
D + F L+LAANYL + LL CQ AD +K KTPEE+R FNI+ DFT EEE+A+
Sbjct: 100 DMETIFKLILAANYLNVEGLLGLTCQTVADYIKDKTPEEVRELFNIENDFTHEEEEEAIR 159
Query: 156 DEHGWA 161
E+ WA
Sbjct: 160 KENAWA 165
Score = 103 (41.3 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
Identities = 24/65 (36%), Positives = 41/65 (63%)
Query: 3 TTSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPVQISSRNLAKIV-EWCKC 61
+++ + L SSD E F+VE+ V + +++++EDD EIP+Q + N+ IV E+CK
Sbjct: 2 SSNKIVLTSSDGESFQVEEVVARKLQIVKHLLEDDCVINEIPLQNVTGNILSIVLEYCK- 60
Query: 62 MQHRD 66
+H D
Sbjct: 61 -KHVD 64
>FB|FBgn0025637 [details] [associations]
symbol:skpA "skpA" species:7227 "Drosophila melanogaster"
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0051298 "centrosome duplication" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0042023
"DNA endoreduplication" evidence=IMP] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IDA;NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0005819 "spindle"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0010824
"regulation of centrosome duplication" evidence=IMP] [GO:0007067
"mitosis" evidence=IMP] [GO:0031647 "regulation of protein
stability" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007095 "mitotic G2 DNA damage checkpoint"
evidence=IGI] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0005813 GO:GO:0005875
GO:GO:0007095 GO:GO:0007067 GO:GO:0051298 GO:GO:0022008
GO:GO:0005819 GO:GO:0045931 EMBL:AE014298 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0031647 GO:GO:0006511
GO:GO:0019005 GO:GO:0030261 eggNOG:COG5201 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:0042023 EMBL:AL031581 GO:GO:0010824
OMA:VIQWCTY GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:AF220066
EMBL:AY069297 EMBL:BT099582 EMBL:BT099610 PIR:T13390
RefSeq:NP_001033818.1 RefSeq:NP_477390.1 RefSeq:NP_726690.1
RefSeq:NP_726691.1 RefSeq:NP_726692.1 RefSeq:NP_726693.1
RefSeq:NP_726694.1 RefSeq:NP_726695.1 UniGene:Dm.7039 SMR:O77430
DIP:DIP-18869N IntAct:O77430 MINT:MINT-318247 STRING:O77430
EnsemblMetazoa:FBtr0070123 EnsemblMetazoa:FBtr0070124
EnsemblMetazoa:FBtr0070125 EnsemblMetazoa:FBtr0070126
EnsemblMetazoa:FBtr0070127 EnsemblMetazoa:FBtr0070128
EnsemblMetazoa:FBtr0070129 EnsemblMetazoa:FBtr0100530 GeneID:31016
KEGG:dme:Dmel_CG16983 UCSC:CG16983-RA CTD:31016 FlyBase:FBgn0025637
InParanoid:O77430 OrthoDB:EOG4BG7CC GenomeRNAi:31016 NextBio:771500
Uniprot:O77430
Length = 162
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 61/160 (38%), Positives = 90/160 (56%)
Query: 6 TVKLRSSDNEVFEVEKQVMIQSGTIRNMIED----DAADGEIPV-QISSRNLAKIVEWCK 60
++KL+SSD E+F+ + Q+ SGTI+ M+ED D + +P+ ++S L K++ W
Sbjct: 3 SIKLQSSDEEIFDTDIQIAKCSGTIKTMLEDCGMEDDENAIVPLPNVNSTILRKVLTWAH 62
Query: 61 CMQHRDRXXXXXXXXXXXXXXXXXXXXXXXXXXVSEDKDLHFGLLLAANYLEIPALLDRL 120
H+D V D+ F L+LAANYL+I LL+
Sbjct: 63 --YHKDDPQPTEDDESKEKRTDDIISWDADFLKV--DQGTLFELILAANYLDIKGLLELT 118
Query: 121 CQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGW 160
C+ A+++KGKTPEEIR+TFNIKKDF+P EE+ V E+ W
Sbjct: 119 CKTVANMIKGKTPEEIRKTFNIKKDFSPAEEEQVRKENEW 158
>TAIR|locus:2056966 [details] [associations]
symbol:SK19 "AT2G03160" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 HSSP:P63208
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:AC005313
EMBL:DQ056525 IPI:IPI00531321 PIR:T02710 RefSeq:NP_565295.1
UniGene:At.52614 ProteinModelPortal:O81058 SMR:O81058 IntAct:O81058
STRING:O81058 PaxDb:O81058 PRIDE:O81058 EnsemblPlants:AT2G03160.1
GeneID:814845 KEGG:ath:AT2G03160 TAIR:At2g03160 InParanoid:O81058
OMA:VVETHES PhylomeDB:O81058 ProtClustDB:CLSN2917045
Genevestigator:O81058 Uniprot:O81058
Length = 200
Score = 170 (64.9 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 102 FGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGW 160
F ++LAANYL + L D + AD +K TPEE+R FNI+ DFTPEEE+A+ +E+ W
Sbjct: 129 FDIILAANYLNVQGLFDLCSKTIADYIKDMTPEEVRELFNIENDFTPEEEEAIRNENAW 187
Score = 107 (42.7 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 22/59 (37%), Positives = 38/59 (64%)
Query: 3 TTSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPV-QISSRNLAKIVEWCK 60
++ + L SSD E F+VE+ V + + ++IEDD A +IP+ ++ LAK++E+CK
Sbjct: 2 SSKKIVLTSSDGESFKVEEVVARKLQIVGHIIEDDCATNKIPIPNVTGEILAKVIEYCK 60
>WB|WBGene00004808 [details] [associations]
symbol:skr-2 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0007126 "meiosis" evidence=IMP]
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IMP] [GO:0000239 "pachytene" evidence=IMP] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IPI]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0008340 GO:GO:0009792
GO:GO:0000132 GO:GO:0040007 GO:GO:0018991 GO:GO:0040010
GO:GO:0008285 GO:GO:0008406 GO:GO:0002119 GO:GO:0040011
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0040035
GO:GO:0006511 GO:GO:0019005 GO:GO:0045132 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 OMA:IRRAFNI GO:GO:0000239
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:Z81084 EMBL:AF440506
PIR:T22268 RefSeq:NP_492512.1 UniGene:Cel.193 SMR:G5EDD8
IntAct:G5EDD8 EnsemblMetazoa:F46A9.4 GeneID:172773
KEGG:cel:CELE_F46A9.4 CTD:172773 WormBase:F46A9.4 NextBio:876949
Uniprot:G5EDD8
Length = 174
Score = 186 (70.5 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 35/64 (54%), Positives = 46/64 (71%)
Query: 97 DKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMD 156
D+ F L+LAANYL+I LLD CQ A+++KGK+P+EIRR FNIK DFT EE + +
Sbjct: 108 DQGTLFELILAANYLDIKGLLDVACQSVANMIKGKSPDEIRRAFNIKDDFTAEEREQIRK 167
Query: 157 EHGW 160
E+ W
Sbjct: 168 ENAW 171
Score = 90 (36.7 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 2 ATTSTVKLRSSDNEVFEVEKQVMIQSGTIRNMI------EDDAADGE-IPVQ-ISSRNLA 53
A +K+ SSD+E+F V + V+ S T+ ++ +D+ + E IPVQ +++ L
Sbjct: 11 AKNREIKISSSDDEIFLVPRNVIRLSNTLNTLLVDLGLDDDEGTNAEPIPVQNVTASILK 70
Query: 54 KIVEWC 59
K++ WC
Sbjct: 71 KVINWC 76
>UNIPROTKB|G5EDD8 [details] [associations]
symbol:skr-2 "SKR-2" species:6239 "Caenorhabditis elegans"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 GO:GO:0008340 GO:GO:0009792 GO:GO:0000132
GO:GO:0040007 GO:GO:0018991 GO:GO:0040010 GO:GO:0008285
GO:GO:0008406 GO:GO:0002119 GO:GO:0040011 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0040035 GO:GO:0006511
GO:GO:0019005 GO:GO:0045132 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 OMA:IRRAFNI
GO:GO:0000239 GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:Z81084
EMBL:AF440506 PIR:T22268 RefSeq:NP_492512.1 UniGene:Cel.193
SMR:G5EDD8 IntAct:G5EDD8 EnsemblMetazoa:F46A9.4 GeneID:172773
KEGG:cel:CELE_F46A9.4 CTD:172773 WormBase:F46A9.4 NextBio:876949
Uniprot:G5EDD8
Length = 174
Score = 186 (70.5 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 35/64 (54%), Positives = 46/64 (71%)
Query: 97 DKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMD 156
D+ F L+LAANYL+I LLD CQ A+++KGK+P+EIRR FNIK DFT EE + +
Sbjct: 108 DQGTLFELILAANYLDIKGLLDVACQSVANMIKGKSPDEIRRAFNIKDDFTAEEREQIRK 167
Query: 157 EHGW 160
E+ W
Sbjct: 168 ENAW 171
Score = 90 (36.7 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 2 ATTSTVKLRSSDNEVFEVEKQVMIQSGTIRNMI------EDDAADGE-IPVQ-ISSRNLA 53
A +K+ SSD+E+F V + V+ S T+ ++ +D+ + E IPVQ +++ L
Sbjct: 11 AKNREIKISSSDDEIFLVPRNVIRLSNTLNTLLVDLGLDDDEGTNAEPIPVQNVTASILK 70
Query: 54 KIVEWC 59
K++ WC
Sbjct: 71 KVINWC 76
>TAIR|locus:2093084 [details] [associations]
symbol:SK9 "AT3G21850" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0007346 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016567 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
EMBL:AB025634 GO:GO:0006511 HSSP:P63208 eggNOG:COG5201
HOGENOM:HOG000172184 KO:K03094 ProtClustDB:CLSN2688652
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:DQ446683 EMBL:DQ653099 IPI:IPI00543724
RefSeq:NP_566694.1 UniGene:At.70382 ProteinModelPortal:Q9LSX9
SMR:Q9LSX9 IntAct:Q9LSX9 STRING:Q9LSX9 PaxDb:Q9LSX9 PRIDE:Q9LSX9
EnsemblPlants:AT3G21850.1 GeneID:821739 KEGG:ath:AT3G21850
TAIR:At3g21850 InParanoid:Q9LSX9 OMA:ARQCQII Genevestigator:Q9LSX9
Uniprot:Q9LSX9
Length = 153
Score = 183 (69.5 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 35/68 (51%), Positives = 45/68 (66%)
Query: 94 VSEDKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKA 153
+ +D F L+ AANYL I +L D CQ A+I+KG TPE+IR FNI+ D TPEEE A
Sbjct: 84 MEKDTSTIFDLIKAANYLNIKSLFDLACQTVAEIIKGNTPEQIREFFNIENDLTPEEEAA 143
Query: 154 VMDEHGWA 161
+ E+ WA
Sbjct: 144 IRRENKWA 151
Score = 93 (37.8 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 23/66 (34%), Positives = 37/66 (56%)
Query: 3 TTSTVKLRSSDNEVFEVEKQVMIQSGTI-RNMIEDDAADGEIPV-QISSRNLAKIVEWCK 60
+T + L+SSD FEVE++ Q I +M E+D D IP+ ++ + LA ++E+C
Sbjct: 2 STKKIILKSSDGHSFEVEEEAARQCQIIIAHMSENDCTDNGIPLPNVTGKILAMVIEYCN 61
Query: 61 CMQHRD 66
H D
Sbjct: 62 -KHHVD 66
>TAIR|locus:2093094 [details] [associations]
symbol:SK10 "AT3G21860" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 EMBL:AB025634
GO:GO:0006511 GO:GO:0019005 EMBL:DQ056602 IPI:IPI00548110
RefSeq:NP_566695.1 UniGene:At.70381 HSSP:P63208
ProteinModelPortal:Q9LSX8 SMR:Q9LSX8 IntAct:Q9LSX8 STRING:Q9LSX8
EnsemblPlants:AT3G21860.1 GeneID:821740 KEGG:ath:AT3G21860
TAIR:At3g21860 eggNOG:COG5201 HOGENOM:HOG000172184
InParanoid:Q9LSX8 KO:K03094 OMA:IFDLIMA ProtClustDB:CLSN2688652
Genevestigator:Q9LSX8 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 Uniprot:Q9LSX8
Length = 152
Score = 161 (61.7 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 31/59 (52%), Positives = 41/59 (69%)
Query: 102 FGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGW 160
F L++AANYL I +LLD CQ AD++K T E R+ FNI+ D+T EEE+AV E+ W
Sbjct: 91 FDLIMAANYLNIKSLLDLACQTVADMIKDNTVEHTRKFFNIENDYTHEEEEAVRRENQW 149
Score = 112 (44.5 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 3 TTSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPV-QISSRNLAKIVEWCKC 61
+T + L+SSD FEVE++ Q TI +M EDD D IP+ +++ + L ++E+C
Sbjct: 2 STKKIILKSSDGHSFEVEEEAACQCQTIAHMSEDDCTDNGIPLPEVTGKILEMVIEYCN- 60
Query: 62 MQHRD 66
H D
Sbjct: 61 KHHVD 65
>UNIPROTKB|E7ERH2 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=IEA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 GO:GO:0005829 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 GO:GO:0019005 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 HGNC:HGNC:10899
ChiTaRS:SKP1 EMBL:AC104109 EMBL:AC011336 IPI:IPI00979610
ProteinModelPortal:E7ERH2 SMR:E7ERH2 Ensembl:ENST00000519321
ArrayExpress:E7ERH2 Bgee:E7ERH2 Uniprot:E7ERH2
Length = 142
Score = 149 (57.5 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 29/47 (61%), Positives = 37/47 (78%)
Query: 97 DKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIK 143
D+ F L+LAANYL+I LLD C+ A+++KGKTPEEIR+TFNIK
Sbjct: 96 DQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIK 142
Score = 118 (46.6 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 6 TVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGE---IPVQISSRNLA---KIVEWC 59
++KL+SSD E+FEV+ ++ QS TI+ M+ED D E PV + + N A K+++WC
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 60 KCMQHRD 66
H+D
Sbjct: 63 T--HHKD 67
>ASPGD|ASPL0000044827 [details] [associations]
symbol:sconC species:162425 "Emericella nidulans"
[GO:0006790 "sulfur compound metabolic process" evidence=IEP]
[GO:0045116 "protein neddylation" evidence=IEA] [GO:0007095
"mitotic G2 DNA damage checkpoint" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007035 "vacuolar acidification" evidence=IEA] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045841 "negative regulation of mitotic metaphase/anaphase
transition" evidence=IEA] [GO:0000920 "cytokinetic cell separation"
evidence=IEA] [GO:0000921 "septin ring assembly" evidence=IEA]
[GO:0006998 "nuclear envelope organization" evidence=IEA]
[GO:0051382 "kinetochore assembly" evidence=IEA] [GO:0042493
"response to drug" evidence=IEA] [GO:0043254 "regulation of protein
complex assembly" evidence=IEA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0007096 "regulation of exit
from mitosis" evidence=IEA] [GO:0003688 "DNA replication origin
binding" evidence=IEA] [GO:0043295 "glutathione binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043291 "RAVE
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031518 "CBF3 complex" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
UniPathway:UPA00143 EMBL:BN001307 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 EMBL:AACD01000038 GO:GO:0006511
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:U75874
RefSeq:XP_659906.1 HSSP:P34991 ProteinModelPortal:Q5BAX8 SMR:Q5BAX8
STRING:Q5BAX8 GeneID:2874613 KEGG:ani:AN2302.2 OMA:IMNILEV
OrthoDB:EOG4T1MX2 Uniprot:Q5BAX8
Length = 161
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 60/155 (38%), Positives = 87/155 (56%)
Query: 9 LRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGE-IPVQISSRN-LAKIVEWCKCMQHRD 66
+ S+D + EV + V +S I+NM+ED E IP+ S N L+K++EWC HR+
Sbjct: 8 MTSNDGKNIEVPRDVAERSLLIKNMLEDLGDPTEPIPIPNVSENVLSKVLEWCA--HHRN 65
Query: 67 RXXXXXXXXXXXXXXXXXXXXXXXXXXVSEDKDLHFGLLLAANYLEIPALLDRLCQLAAD 126
V D+++ F ++LAANYL+I LLD C+ A+
Sbjct: 66 DPPSSADDDDSRRKTTDIEEWDQKFMQV--DQEMLFEIILAANYLDIKPLLDIGCKTVAN 123
Query: 127 IVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
++KGK+PEEIR+TFNI+ DFTPEEE + E+ WA
Sbjct: 124 MIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 158
>UNIPROTKB|G4N3J5 [details] [associations]
symbol:MGG_04978 "E3 ubiquitin ligase complex SCF subunit
scon-3" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
EMBL:CM001233 GO:GO:0016874 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
RefSeq:XP_003712477.1 ProteinModelPortal:G4N3J5 SMR:G4N3J5
EnsemblFungi:MGG_04978T0 GeneID:2675549 KEGG:mgr:MGG_04978
Uniprot:G4N3J5
Length = 168
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 57/160 (35%), Positives = 90/160 (56%)
Query: 7 VKLRSSDNEVFEVEKQVMIQSGTIRNMI----EDDAADGEIPV-QISSRNLAKIVEWCKC 61
V L+S+D + EV++ V +S I+++I E+ A IP+ +S L K++EWC+
Sbjct: 9 VNLQSNDGQSIEVDRAVACRSRLIKDLIGDLGEEMVASTPIPIPNVSEAVLRKVLEWCE- 67
Query: 62 MQHRDRXXXXXXXXXXXXXXXXXXXXXXXXXXVSEDKDLHFGLLLAANYLEIPALLDRLC 121
HR+ + D+++ F ++LA+NYL+I LLD C
Sbjct: 68 -HHRN-DPVQTSDEDSESRKKTTDIDEWDQKFMQVDQEMLFEIILASNYLDIKPLLDVGC 125
Query: 122 QLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
+ A+++KGK+PEEIR+TFNI DFTPEEE+ + E+ WA
Sbjct: 126 KTVANMIKGKSPEEIRKTFNITNDFTPEEEEQIRRENEWA 165
>CGD|CAL0001786 [details] [associations]
symbol:SKP1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0043291 "RAVE complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0031518 "CBF3 complex"
evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0045116 "protein neddylation" evidence=IEA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IEA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0007035 "vacuolar acidification"
evidence=IEA] [GO:0000920 "cytokinetic cell separation"
evidence=IEA] [GO:0045841 "negative regulation of mitotic
metaphase/anaphase transition" evidence=IEA] [GO:0000921 "septin
ring assembly" evidence=IEA] [GO:0006998 "nuclear envelope
organization" evidence=IEA] [GO:0051382 "kinetochore assembly"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0043254 "regulation of protein complex assembly" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0007096 "regulation of exit from mitosis" evidence=IEA]
[GO:0003688 "DNA replication origin binding" evidence=IEA]
[GO:0019237 "centromeric DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 CGD:CAL0001786
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
EMBL:AACQ01000115 EMBL:AACQ01000111 RefSeq:XP_713872.1
RefSeq:XP_714072.1 ProteinModelPortal:Q59WE2 SMR:Q59WE2
STRING:Q59WE2 GeneID:3644272 GeneID:3644485 KEGG:cal:CaO19.11905
KEGG:cal:CaO19.4427 Uniprot:Q59WE2
Length = 164
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 58/157 (36%), Positives = 87/157 (55%)
Query: 11 SSDNEVFEVEKQVMIQSGTIRNMIEDDAADG-----EIPV-QISSRNLAKIVEWCKCMQH 64
SSDNE F VE ++ +S I+NMI D DG EIP + + L K++EWC+ H
Sbjct: 10 SSDNEKFPVEPKIAEKSILIKNMINDLHPDGLEEDFEIPTPNVRANVLCKVLEWCE--HH 67
Query: 65 RDRXXXXXXXXXXXXXXXXXXXXXXXXXXVSEDKDLHFGLLLAANYLEIPALLDRLCQLA 124
++ + D+++ + ++LAANYL I LL+ C++
Sbjct: 68 KN---TVFQDDEDEDAKKSVPVEEWDRNFLKVDQEMLYEIILAANYLNIKPLLESGCKMV 124
Query: 125 ADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
A+++K K+PEE+RRTFNI DF+PEEE A+ E+ WA
Sbjct: 125 AEMIKSKSPEELRRTFNIINDFSPEEEAAIRKENEWA 161
>TAIR|locus:2056931 [details] [associations]
symbol:SK16 "AT2G03190" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 GO:GO:0019005
HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:AC005313 EMBL:BT015070 EMBL:BT015726
IPI:IPI00519862 PIR:T02707 RefSeq:NP_565297.1 UniGene:At.50066
ProteinModelPortal:O81055 SMR:O81055 IntAct:O81055 STRING:O81055
PaxDb:O81055 PRIDE:O81055 EnsemblPlants:AT2G03190.1 GeneID:814848
KEGG:ath:AT2G03190 TAIR:At2g03190 InParanoid:O81055 OMA:CADKAIP
PhylomeDB:O81055 ProtClustDB:CLSN2917046 Genevestigator:O81055
Uniprot:O81055
Length = 170
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 57/167 (34%), Positives = 86/167 (51%)
Query: 3 TTSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPVQ-ISSRNLAKIVEWCK- 60
+++ + L SSD+E FEVE+ V + I +MI+DD AD IP++ ++ LA ++E+CK
Sbjct: 2 SSNKIVLTSSDDESFEVEEAVARKLKVIAHMIDDDCADKAIPLENVTGNILALVIEYCKK 61
Query: 61 -CMQHRDRXXXXXXXXXXXXXXXXXXXXXXXXXXVSEDKDLH--FGLLLAANYLEIPALL 117
+ D ++ D+ L+LA NYL + LL
Sbjct: 62 HVLDDVDDSDDSTEATSENVNEEAKNELRTWDAEFMKEFDMETVMKLILAVNYLNVQDLL 121
Query: 118 DRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWALHD 164
CQ AD +K +PEE+R FNI+ D+TPEEE A+ E+ WA D
Sbjct: 122 GLTCQTVADHMKDMSPEEVRELFNIENDYTPEEEDAIRKENAWAFED 168
>WB|WBGene00004809 [details] [associations]
symbol:skr-3 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IMP]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0006952
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 OMA:ENDFTHE EMBL:Z83109
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:AF440507 PIR:T22198
RefSeq:NP_507059.1 UniGene:Cel.192 ProteinModelPortal:G5EE67
SMR:G5EE67 EnsemblMetazoa:F44G3.6.1 EnsemblMetazoa:F44G3.6.2
GeneID:180081 KEGG:cel:CELE_F44G3.6 CTD:180081 WormBase:F44G3.6
NextBio:908014 Uniprot:G5EE67
Length = 167
Score = 158 (60.7 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 31/64 (48%), Positives = 44/64 (68%)
Query: 97 DKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMD 156
D+ F ++LAANYL+I LLD Q A+++KGKTP +IR FNI+ DF+ EE +A+
Sbjct: 101 DQGTLFEIILAANYLDIRGLLDVTTQNVANMMKGKTPSQIRTLFNIENDFSEEEREAMKK 160
Query: 157 EHGW 160
E+ W
Sbjct: 161 ENAW 164
Score = 97 (39.2 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 27/68 (39%), Positives = 42/68 (61%)
Query: 7 VKLRSSDNEVFEVEKQVMIQSGTI----RNM-IEDDAADGE--IPVQ-ISSRNLAKIVEW 58
+KL SSD++ F V ++V+ QS TI +N+ IE+ + E IP+Q ++S L KI+ W
Sbjct: 10 IKLTSSDDKTFTVSRKVISQSKTITDIIQNLGIEESGSTSEDTIPLQKVTSTILEKIITW 69
Query: 59 CKCMQHRD 66
C+ H D
Sbjct: 70 CE--HHAD 75
>TAIR|locus:2080542 [details] [associations]
symbol:SK5 "AT3G60020" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
EMBL:AL138647 HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:DQ056631 IPI:IPI00544108 PIR:T47826
RefSeq:NP_567091.1 UniGene:At.62418 ProteinModelPortal:Q9M1X4
SMR:Q9M1X4 IntAct:Q9M1X4 STRING:Q9M1X4 PRIDE:Q9M1X4
EnsemblPlants:AT3G60020.1 GeneID:825172 KEGG:ath:AT3G60020
TAIR:At3g60020 InParanoid:Q9M1X4 OMA:EWDADFM
ProtClustDB:CLSN2917466 Genevestigator:Q9M1X4 Uniprot:Q9M1X4
Length = 153
Score = 151 (58.2 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 31/65 (47%), Positives = 43/65 (66%)
Query: 102 FGLLLAANYLEIPALLDRLCQ-----LAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMD 156
F +++AANYL I +LLD C+ L AD++ GKTP+EIR FNI+ D T EE + +
Sbjct: 87 FDVMMAANYLNIQSLLDLTCKTVSDLLQADLLSGKTPDEIRAHFNIENDLTAEEVAKIRE 146
Query: 157 EHGWA 161
E+ WA
Sbjct: 147 ENQWA 151
Score = 94 (38.1 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 18/58 (31%), Positives = 39/58 (67%)
Query: 4 TSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPVQ-ISSRNLAKIVEWCK 60
++ + L+SSD + FE+++ V +S I +M+ED A IP++ ++S+ L ++++C+
Sbjct: 2 STKIMLKSSDGKSFEIDEDVARKSIAINHMVEDGCATDVIPLRNVTSKILKIVIDYCE 59
>TAIR|locus:2061709 [details] [associations]
symbol:MEO "AT2G20160" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 HSSP:P63208
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:AC006081
IPI:IPI00536504 PIR:G84585 RefSeq:NP_565467.1 UniGene:At.66224
ProteinModelPortal:Q9SL65 SMR:Q9SL65 IntAct:Q9SL65 STRING:Q9SL65
EnsemblPlants:AT2G20160.1 GeneID:816536 KEGG:ath:AT2G20160
TAIR:At2g20160 InParanoid:Q9SL65 OMA:LAIIIEY PhylomeDB:Q9SL65
Genevestigator:Q9SL65 Uniprot:Q9SL65
Length = 150
Score = 134 (52.2 bits), Expect = 8.1e-19, Sum P(2) = 8.1e-19
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 97 DKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMD 156
D D F LL AA+YL + L + + Q AD KT EIR FNI+ D+TPEEE+ +
Sbjct: 84 DMDTLFKLLDAADYLIVIGLKNLIAQAIADYTADKTVNEIRELFNIENDYTPEEEEELRK 143
Query: 157 EHGWALH 163
++ WA +
Sbjct: 144 KNEWAFN 150
Score = 106 (42.4 bits), Expect = 8.1e-19, Sum P(2) = 8.1e-19
Identities = 24/65 (36%), Positives = 42/65 (64%)
Query: 3 TTSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPVQ-ISSRNLAKIVEWCKC 61
++ + L SSD+E FE+++ V + + +MI+DD AD I +Q ++ + LA I+E+CK
Sbjct: 2 SSKKIVLTSSDDECFEIDEAVARKMQMVAHMIDDDCADKAIRLQNVTGKILAIIIEYCK- 60
Query: 62 MQHRD 66
+H D
Sbjct: 61 -KHVD 64
>FB|FBgn0034863 [details] [associations]
symbol:skpF "skpF" species:7227 "Drosophila melanogaster"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0000152 "nuclear ubiquitin ligase complex" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
EMBL:AE013599 GO:GO:0016567 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 GO:GO:0004842 eggNOG:COG5201
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GeneTree:ENSGT00390000012652 HSSP:P34991
EMBL:AY118610 RefSeq:NP_611796.1 UniGene:Dm.18854 SMR:Q9W1Q0
IntAct:Q9W1Q0 MINT:MINT-783087 STRING:Q9W1Q0
EnsemblMetazoa:FBtr0072022 GeneID:37713 KEGG:dme:Dmel_CG12227
UCSC:CG12227-RA CTD:37713 FlyBase:FBgn0034863 InParanoid:Q9W1Q0
OMA:PVEAEND OrthoDB:EOG45QFWH GenomeRNAi:37713 NextBio:805037
Uniprot:Q9W1Q0
Length = 171
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 54/150 (36%), Positives = 81/150 (54%)
Query: 7 VKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGE----IPV-QISSRNLAKIVEWCKC 61
+KL+SSD E+FE + + S TI+ ++ED + E IP+ ++S L K++ W K
Sbjct: 4 IKLQSSDGEIFETDIETAKCSSTIKTLLEDCPVEAENDTLIPLPNVNSTILKKVLIWAK- 62
Query: 62 MQHRDRXXXXXXXXXXXXXXXXXXXXXXXXXXVSEDKDLHFGLLLAANYLEIPALLDRLC 121
HR+ +S D+ F L+LAANYL+IP LL+ C
Sbjct: 63 -HHRE--DIAEENEEEAAKSVAVQITPWDAEFLSMDQGTLFELILAANYLDIPNLLNAAC 119
Query: 122 QLAADIVKGKTPEEIRRTFNIKKDFTPEEE 151
A+++KG+T EEIR+TF+I DF+P EE
Sbjct: 120 MTVANMIKGRTTEEIRQTFHITNDFSPSEE 149
>SGD|S000002736 [details] [associations]
symbol:SKP1 "Evolutionarily conserved kinetochore protein"
species:4932 "Saccharomyces cerevisiae" [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0000921 "septin ring assembly" evidence=IMP] [GO:0000776
"kinetochore" evidence=IEA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006461 "protein complex assembly" evidence=IDA]
[GO:0003688 "DNA replication origin binding" evidence=IPI]
[GO:0045116 "protein neddylation" evidence=IGI;IMP] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0031518 "CBF3 complex" evidence=IGI;IDA;IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA;IPI]
[GO:0000777 "condensed chromosome kinetochore" evidence=IEA]
[GO:0043291 "RAVE complex" evidence=IPI] [GO:0051382 "kinetochore
assembly" evidence=IMP;IDA] [GO:0043254 "regulation of protein
complex assembly" evidence=IPI] [GO:0007035 "vacuolar
acidification" evidence=IGI;IMP] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0007096 "regulation of
exit from mitosis" evidence=IMP;IPI] [GO:0000910 "cytokinesis"
evidence=IMP] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
UniPathway:UPA00143 SGD:S000002736 GO:GO:0005634 GO:GO:0005773
GO:GO:0000086 GO:GO:0000776 GO:GO:0000082 EMBL:BK006938
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0003688
GO:GO:0000910 GO:GO:0019005 GO:GO:0007096 GO:GO:0000921
GO:GO:0042787 GO:GO:0051382 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:U32517 GO:GO:0000777 GO:GO:0007035
GO:GO:0031518 GO:GO:0031146 PDB:1NEX PDB:3MKS PDB:3V7D PDBsum:1NEX
PDBsum:3MKS PDBsum:3V7D GO:GO:0045116 GO:GO:0043254
RefSeq:NP_010619.3 GeneID:851932 KEGG:sce:YDR332W
RefSeq:NP_010615.3 GeneID:851928 KEGG:sce:YDR328C GO:GO:0043291
GeneTree:ENSGT00390000012652 OrthoDB:EOG4T1MX2 EMBL:U43179
EMBL:U61764 EMBL:AY557730 PIR:S59793 ProteinModelPortal:P52286
SMR:P52286 DIP:DIP-1236N IntAct:P52286 MINT:MINT-384072
STRING:P52286 PaxDb:P52286 PeptideAtlas:P52286 PRIDE:P52286
EnsemblFungi:YDR328C OMA:PVEIANG EvolutionaryTrace:P52286
NextBio:969983 Genevestigator:P52286 GermOnline:YDR328C
Uniprot:P52286
Length = 194
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 55/154 (35%), Positives = 83/154 (53%)
Query: 11 SSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEI--PV-QISSRNLAKIVEWCKCMQHRDR 67
+SD+E + + + +S N +DD D EI PV + S L K++EW + HRD
Sbjct: 44 NSDSES-DSDSETNHKSKDNNNGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAE--HHRD- 99
Query: 68 XXXXXXXXXXXXXXXXXXXXXXXXXXVSEDKDLHFGLLLAANYLEIPALLDRLCQLAADI 127
+ D+++ + ++LAANYL I LLD C++ A++
Sbjct: 100 --SNFPDEDDDDSRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEM 157
Query: 128 VKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
++G++PEEIRRTFNI DFTPEEE A+ E+ WA
Sbjct: 158 IRGRSPEEIRRTFNIVNDFTPEEEAAIRRENEWA 191
>FB|FBgn0026176 [details] [associations]
symbol:skpB "skpB" species:7227 "Drosophila melanogaster"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
EMBL:AE013599 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GeneTree:ENSGT00390000012652
HSSP:P34991 EMBL:AF220067 EMBL:BT023253 RefSeq:NP_610729.1
UniGene:Dm.7613 SMR:Q7KJ69 DIP:DIP-18873N IntAct:Q7KJ69
STRING:Q7KJ69 EnsemblMetazoa:FBtr0088020 GeneID:36298
KEGG:dme:Dmel_CG8881 UCSC:CG8881-RA CTD:36298 FlyBase:FBgn0026176
InParanoid:Q7KJ69 OMA:MPIIRLE OrthoDB:EOG4ZCRMP GenomeRNAi:36298
NextBio:797800 Uniprot:Q7KJ69
Length = 161
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 54/158 (34%), Positives = 83/158 (52%)
Query: 7 VKLRSSDNEVFEVEKQVMIQSGTIRNMIED--DAADGEI-PV-QISSRNLAKIVEWCKCM 62
++L S+D E+F+ ++++ S TIR IED D +D + P+ ++S L K++ W
Sbjct: 4 IRLESADKEIFDTDQEIAKCSETIRIAIEDLGDESDNSVLPLPNVNSLILKKVLHWAT-- 61
Query: 63 QHRDRXXXXXXXXXXXXXXXXXXXXXXXXXXVSEDKDLHFGLLLAANYLEIPALLDRLCQ 122
H+D V D+ F L+LAANYL I LLD C+
Sbjct: 62 YHKDDPVVTEEVENKEKRTDDISSWDADFLKV--DQGTLFELILAANYLNIQGLLDVTCK 119
Query: 123 LAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGW 160
A+++KGK+P+ IR TF I+ DF P+EE+ V E+ W
Sbjct: 120 TVANMIKGKSPQAIRDTFAIQNDFLPQEEEQVRKENEW 157
>TAIR|locus:2093064 [details] [associations]
symbol:SK8 "AT3G21830" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 EMBL:AB025634
GO:GO:0006511 GO:GO:0019005 HSSP:P63208 eggNOG:COG5201
HOGENOM:HOG000172184 KO:K03094 ProtClustDB:CLSN2688652
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:DQ056601 IPI:IPI00519509 RefSeq:NP_566692.1
UniGene:At.62404 ProteinModelPortal:Q9LSY1 SMR:Q9LSY1 IntAct:Q9LSY1
EnsemblPlants:AT3G21830.1 GeneID:821737 KEGG:ath:AT3G21830
TAIR:At3g21830 InParanoid:Q9LSY1 OMA:HNEALNE Genevestigator:Q9LSY1
Uniprot:Q9LSY1
Length = 152
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 53/160 (33%), Positives = 81/160 (50%)
Query: 3 TTSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPV-QISSRNLAKIVEWCKC 61
+T + L+SS+ + FE+E++ Q TI +MIE + D I V +++S L ++E+C
Sbjct: 2 STKKIMLKSSEGKTFEIEEETARQCQTIAHMIEAECTDNVILVLKMTSEILEMVIEYCN- 60
Query: 62 MQHRDRXXXXXXXXXXXXXXXXXXXXXXXXXXVSEDKDLHFGLLLAANYLEIPALLDRLC 121
H D + +DK F L AAN+L +LL
Sbjct: 61 KHHVD----------AANPCSDDDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAG 110
Query: 122 QLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
Q AD++KG TP+++R FNI+ D TPEEE A+ E+ WA
Sbjct: 111 QTVADMIKGNTPKQMREFFNIENDLTPEEEAAIRRENKWA 150
>FB|FBgn0026175 [details] [associations]
symbol:skpC "skpC" species:7227 "Drosophila melanogaster"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
EMBL:AE014298 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 eggNOG:COG5201 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 OrthoDB:EOG4K6DMM
EMBL:AF220068 EMBL:BT120007 RefSeq:NP_608358.1 UniGene:Dm.26675
SMR:Q9VWC4 IntAct:Q9VWC4 MINT:MINT-763311 STRING:Q9VWC4
EnsemblMetazoa:FBtr0074797 GeneID:32996 KEGG:dme:Dmel_CG11941
UCSC:CG11941-RA CTD:32996 FlyBase:FBgn0026175 InParanoid:Q9VWC4
OMA:HMIEESS GenomeRNAi:32996 NextBio:781428 Uniprot:Q9VWC4
Length = 158
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 47/142 (33%), Positives = 74/142 (52%)
Query: 6 TVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGE----IPV-QISSRNLAKIVEWCK 60
T+KL SSD +F E + S TI+ M+E A + + +P+ ++++ L+KI+ W
Sbjct: 5 TIKLESSDGMIFSTEVRAAKLSETIKTMLEVSAVENDENAIVPLPKVNAFILSKILTWI- 63
Query: 61 CMQHRDRXXXXXXXXXXXXXXXXXXXXXXXXXXVSEDKDLHFGLLLAANYLEIPALLDRL 120
H+D ++ D+ F ++LAANYLEI L+D
Sbjct: 64 -YHHKD-DDAHGAEGVELSPQSPHDISAWDANFINVDQPTLFEIILAANYLEIKGLVDLC 121
Query: 121 CQLAADIVKGKTPEEIRRTFNI 142
C+ A++++GKTPEEIR TFNI
Sbjct: 122 CKTVANMIRGKTPEEIRHTFNI 143
>WB|WBGene00004814 [details] [associations]
symbol:skr-8 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0000003 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:CU457737
EMBL:AF440510 RefSeq:NP_503044.1 UniGene:Cel.189
ProteinModelPortal:G5ECY4 SMR:G5ECY4 EnsemblMetazoa:C52D10.9
GeneID:178495 KEGG:cel:CELE_C52D10.9 CTD:178495 WormBase:C52D10.9
OMA:NINVPEW NextBio:901360 Uniprot:G5ECY4
Length = 194
Score = 112 (44.5 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 22/57 (38%), Positives = 39/57 (68%)
Query: 97 DKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKA 153
D ++ F L++A NYL++P L++ C++ A++ GK+P+E+R F I D EE++A
Sbjct: 113 DNEVLFDLIVACNYLDVPGLMNYGCKMVANMAIGKSPDELRIIFAIPTD---EEDEA 166
Score = 89 (36.4 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 8 KLRSSDNEVFEVEKQVMIQSGTIRNMI-----EDDAADGEIPVQISSRNLAK-IVEWCK 60
K+ S+D +VFE+ + + QS + N+I ED A+ IP+ + N+ K ++EWC+
Sbjct: 24 KVESNDGKVFEISDEAVKQSNILSNLISTCAPEDVASMDPIPITNVTGNILKMVIEWCE 82
>FB|FBgn0026174 [details] [associations]
symbol:skpD "skpD" species:7227 "Drosophila melanogaster"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 HSSP:P34991 EMBL:AY070797 ProteinModelPortal:Q8T976
STRING:Q8T976 FlyBase:FBgn0026174 InParanoid:Q8T976
OrthoDB:EOG4K6DMM Bgee:Q8T976 Uniprot:Q8T976
Length = 182
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 47/145 (32%), Positives = 75/145 (51%)
Query: 6 TVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGE----IPV-QISSRNLAKIVEWCK 60
T+KL SSD +F E + S TI+ M+E A + + +P+ ++++ L KI+ W
Sbjct: 29 TIKLESSDGVIFSTEVKAAKLSETIKTMLEVSAVENDENAVVPLPKVNAFILDKILTWA- 87
Query: 61 CMQHRDRXXXXXXXXXXXXXXXXXXXXXXXXXXVSEDKDLHFGLLLAANYLEIPALLDRL 120
H+D ++ D+ + F + +AANYLEI L D
Sbjct: 88 -YHHKD-DDDQAAEGEELTPQSPHDISPWDANFINVDQPILFEITVAANYLEIKGLEDLC 145
Query: 121 CQLAADIVKGKTPEEIRRTFNIKKD 145
C+ A++++GKTPEEIR+TFNI+ D
Sbjct: 146 CKTLANMIRGKTPEEIRQTFNIEDD 170
>WB|WBGene00004815 [details] [associations]
symbol:skr-9 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0000003 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:CU457737
EMBL:AF440511 RefSeq:NP_503043.1 UniGene:Cel.188
ProteinModelPortal:G5EFA9 SMR:G5EFA9 IntAct:G5EFA9
EnsemblMetazoa:C52D10.7 GeneID:178494 KEGG:cel:CELE_C52D10.7
CTD:178494 WormBase:C52D10.7 OMA:KIVAMMA NextBio:901356
Uniprot:G5EFA9
Length = 194
Score = 112 (44.5 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 23/57 (40%), Positives = 38/57 (66%)
Query: 97 DKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKA 153
D D+ F L++A NYL++P L++ C++ A + GK+P+E+R F I D EE++A
Sbjct: 113 DNDVLFDLIVACNYLDVPGLMNYGCKIVAMMAIGKSPDELRIIFAIPTD---EEDEA 166
Score = 86 (35.3 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 8 KLRSSDNEVFEVEKQVMIQSGTIRNMI-----EDDAADGEIPVQISSRNLAK-IVEWCK 60
K+ S+D +VFE+ + + QS + N+I ED A+ IP+ N+ K ++EWC+
Sbjct: 24 KVESNDGKVFEISDEAVKQSNILSNLISTCAPEDVASMDPIPITNVIGNILKMVIEWCE 82
>FB|FBgn0031074 [details] [associations]
symbol:skpE "skpE" species:7227 "Drosophila melanogaster"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0022008 EMBL:AE014298
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GeneTree:ENSGT00390000012652 HSSP:P34991
OrthoDB:EOG4K6DMM EMBL:AY752578 EMBL:AY752581 RefSeq:NP_608359.1
UniGene:Dm.17269 SMR:Q9VWC3 IntAct:Q9VWC3 STRING:Q9VWC3
EnsemblMetazoa:FBtr0074806 GeneID:32997 KEGG:dme:Dmel_CG11942
UCSC:CG11942-RA CTD:32997 FlyBase:FBgn0031074 InParanoid:Q9VWC3
OMA:QNDENAI GenomeRNAi:32997 NextBio:781433 Uniprot:Q9VWC3
Length = 167
Score = 108 (43.1 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 21/45 (46%), Positives = 32/45 (71%)
Query: 104 LLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTP 148
++LAA L+I LL+ + A++++GKTPEEIR FNI +D +P
Sbjct: 105 IILAAKQLQIKGLLELTYNVVANMIRGKTPEEIRFIFNIPEDVSP 149
Score = 88 (36.0 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 4 TSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGE----IPVQ-ISSRNLAKIVEW 58
T T+KL SS+ +F E +V + S TI+ M++ A + +P+ +S+ L KI+ W
Sbjct: 3 TPTIKLESSEGVIFPTEVRVAMVSETIKTMLDHFAVQNDENAIVPLHSVSTFTLGKILAW 62
Query: 59 CKCMQHRD 66
H+D
Sbjct: 63 AN--HHKD 68
>WB|WBGene00004810 [details] [associations]
symbol:skr-4 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 OMA:EWDADFM
EMBL:AL117207 GeneTree:ENSGT00390000012652 HSSP:P34991
RefSeq:NP_507857.1 ProteinModelPortal:Q9U1Y9 SMR:Q9U1Y9
STRING:Q9U1Y9 PaxDb:Q9U1Y9 EnsemblMetazoa:Y60A3A.18 GeneID:191762
KEGG:cel:CELE_Y60A3A.18 UCSC:Y60A3A.18 CTD:191762
WormBase:Y60A3A.18 InParanoid:Q9U1Y9 NextBio:950246 Uniprot:Q9U1Y9
Length = 159
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 49/155 (31%), Positives = 78/155 (50%)
Query: 7 VKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPV-QISSRNLAKIVEWCKCMQHR 65
+KL SSD++ F V ++V+ QS TI +D IP+ +++S L KI+ WC+ H
Sbjct: 10 IKLISSDDKTFTVSRKVISQSKTISGFTSEDT----IPLPKVTSAILEKIITWCE--HHA 63
Query: 66 DRXXXXXXXXXXXXXXXXXXXXXXXXXXVSEDKDLHFGLLLAANYLEIPALLDRLCQLAA 125
D + D+ F ++LAANYL+I LL+ Q A
Sbjct: 64 D-DEPKKVEKIEKGNKKTVEISEWDAEFMKVDQGTLFEIILAANYLDIRGLLEVTTQNVA 122
Query: 126 DIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGW 160
+++KGKTP ++R F I +F+ EE +A+ + W
Sbjct: 123 NMMKGKTPSQVRTLFKID-NFSEEELEAMKKGNAW 156
>WB|WBGene00004813 [details] [associations]
symbol:skr-7 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0010171 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:FO081134
EMBL:AF440509 RefSeq:NP_504221.1 UniGene:Cel.190
ProteinModelPortal:G5EDY3 SMR:G5EDY3 IntAct:G5EDY3
EnsemblMetazoa:Y47D7A.1 GeneID:178840 KEGG:cel:CELE_Y47D7A.1
CTD:178840 WormBase:Y47D7A.1 OMA:QANEAPI NextBio:902772
Uniprot:G5EDY3
Length = 194
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 44/157 (28%), Positives = 79/157 (50%)
Query: 8 KLRSSDNEVFEVEKQVMIQSGTIRNMIE-----DDAADGEIPVQISSRNLAK-IVEWCKC 61
K+ SSD +V+E+ + + QS T+ N+I D A+ IP+ + N+ K ++EWC+
Sbjct: 24 KVESSDGQVYEISDEAVKQSNTLSNLISTCVANDVASMDPIPITNVTGNIMKMVIEWCE- 82
Query: 62 MQHRDRXXXXXXXXXXXXXXXXXXXXXXXXXXVSEDKDLHFGLLLAANYLEIPALLDRLC 121
+H+ + D D+ F L++A+N+L++P L+ C
Sbjct: 83 -KHKGETLPVEDDSVPKNITVPEWDTNF----LKIDNDVLFDLIVASNFLDVPGLMSYAC 137
Query: 122 QLAADIVKGKTPEEIRRTFNIKKDFTPEE-EKAVMDE 157
++ A++ GK+P+E+R F I D E EKA ++
Sbjct: 138 KMVANMAIGKSPDEMRVLFAIPTDEEDEAAEKAAKEK 174
>WB|WBGene00004811 [details] [associations]
symbol:skr-5 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GeneTree:ENSGT00390000012652
HSSP:P34991 EMBL:Z92786 PIR:T22373 RefSeq:NP_507393.1
ProteinModelPortal:Q9XU27 SMR:Q9XU27 STRING:Q9XU27
EnsemblMetazoa:F47H4.10 GeneID:180148 KEGG:cel:CELE_F47H4.10
UCSC:F47H4.10 CTD:180148 WormBase:F47H4.10 InParanoid:Q9XU27
NextBio:908236 ArrayExpress:Q9XU27 Uniprot:Q9XU27
Length = 145
Score = 114 (45.2 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 97 DKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPE 149
DK F L+LAA YL+I L + C+ A+ +KGK+PEEIR FN+ + E
Sbjct: 93 DKGTLFELVLAATYLDIKGLFNVTCKSIANSIKGKSPEEIRAVFNLGNETNME 145
Score = 63 (27.2 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 15/55 (27%), Positives = 32/55 (58%)
Query: 7 VKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPVQ-ISSRNLAKIVEWCK 60
VK+ +SD+ F V ++ QS + + + + + IP++ ++S K++EWC+
Sbjct: 8 VKIVTSDDVEFIVSPKIANQSKLLADFVVLNQRE-PIPLKNVTSEIFKKVIEWCE 61
>WB|WBGene00004816 [details] [associations]
symbol:skr-10 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0002164 "larval development" evidence=IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0040032
"post-embryonic body morphogenesis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0008283 GO:GO:0000003 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 GO:GO:0019005
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:0040032 EMBL:AL110479
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:AF440512 PIR:T26386
RefSeq:NP_502902.1 UniGene:Cel.187 ProteinModelPortal:G5EG39
SMR:G5EG39 IntAct:G5EG39 EnsemblMetazoa:Y105C5B.13 GeneID:178447
KEGG:cel:CELE_Y105C5B.13 CTD:178447 WormBase:Y105C5B.13 OMA:PARGLTI
NextBio:901170 Uniprot:G5EG39
Length = 192
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 44/152 (28%), Positives = 77/152 (50%)
Query: 8 KLRSSDNEVFEVEKQVMIQSGTIRNMI-----EDDAADGEIPVQISSRNLAK-IVEWCKC 61
K+ S+D VFE+ + + QS T+ N+I ED A+ IP+ + N+ K ++EWC+
Sbjct: 22 KVESNDGTVFEISDEAVKQSNTLSNLISTCAPEDVASMDPIPITNVTGNILKMVIEWCE- 80
Query: 62 MQHRDRXXXXXXXXXXXXXXXXXXXXXXXXXXVSEDKDLHFGLLLAANYLEIPALLDRLC 121
+H+ + D ++ F L++A NYL++P L++ C
Sbjct: 81 -KHKGEALPVDDDSVPKHITVPEWDTNF----LKIDNEVLFDLIVACNYLDVPGLMNYGC 135
Query: 122 QLAADIVKGKTPEEIRRTFNIKKDFTPEEEKA 153
++ A + GK+P+E+R F I D EE++A
Sbjct: 136 KMVAMMAIGKSPDELRIIFAIPTD---EEDEA 164
>WB|WBGene00004818 [details] [associations]
symbol:skr-12 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0045132
"meiotic chromosome segregation" evidence=IMP] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 GO:GO:0045132 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:CU457737 EMBL:U60980
EMBL:AF440513 RefSeq:NP_503045.1 UniGene:Cel.20512
ProteinModelPortal:G5EGD5 SMR:G5EGD5 EnsemblMetazoa:C52D10.6.1
EnsemblMetazoa:C52D10.6.2 GeneID:178496 KEGG:cel:CELE_C52D10.6
CTD:178496 WormBase:C52D10.6 OMA:FDEHANN NextBio:901364
Uniprot:G5EGD5
Length = 172
Score = 96 (38.9 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 96 EDKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKD 145
ED+ L F L+LA+N+L+I L+ C+ +++ KGKT E+R F I D
Sbjct: 107 EDEAL-FDLILASNFLDIKGLMYFGCKTVSNMAKGKTTAELREIFGINTD 155
Score = 77 (32.2 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 8 KLRSSDNEVFEVEKQVMIQSGTIRNMIED--------DAADGEIPV-QISSRNLAKIVEW 58
K+ SSD V ++ ++ + QS T+ N+IE+ + D IPV ++ + +AK+ EW
Sbjct: 16 KIISSDGVVSKMSEKAVQQSKTLSNLIENLGYTIENIETRD-PIPVTNVNGKTMAKVAEW 74
Query: 59 CK 60
C+
Sbjct: 75 CE 76
>TAIR|locus:2093074 [details] [associations]
symbol:SK7 "AT3G21840" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 EMBL:AB025634
GO:GO:0006511 GO:GO:0019005 HSSP:P63208 eggNOG:COG5201
HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:BX841469 IPI:IPI00538513
RefSeq:NP_566693.1 UniGene:At.70383 ProteinModelPortal:Q9LSY0
SMR:Q9LSY0 IntAct:Q9LSY0 STRING:Q9LSY0 EnsemblPlants:AT3G21840.1
GeneID:821738 KEGG:ath:AT3G21840 TAIR:At3g21840 InParanoid:Q9LSY0
OMA:LMIIACK Genevestigator:Q9LSY0 Uniprot:Q9LSY0
Length = 125
Score = 112 (44.5 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 3 TTSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPVQ-ISSRNLAKIVEWCKC 61
+T + L+SSD ++FE+E++ Q TI +MIE + D IPV ++S L ++E+C
Sbjct: 2 STKKIMLKSSDGKMFEIEEETARQCQTIAHMIEAECTDNVIPVSNVTSEILEMVIEYCN- 60
Query: 62 MQHRD 66
H D
Sbjct: 61 KHHVD 65
Score = 40 (19.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 97 DKDLH--FGLLLAANYLEIPALLDRLCQLAADIV 128
+KD + F L+ AA L I +LL Q AD+V
Sbjct: 84 EKDQYTIFHLMNAAYDLHIKSLLALAYQTVADMV 117
>WB|WBGene00004821 [details] [associations]
symbol:skr-15 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
GO:GO:0040010 GO:GO:0006974 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:AF440516
EMBL:FO080579 PIR:T33615 RefSeq:NP_494662.1 UniGene:Cel.185
ProteinModelPortal:G5EE88 SMR:G5EE88 EnsemblMetazoa:F54D10.1
GeneID:173729 KEGG:cel:CELE_F54D10.1 CTD:173729 WormBase:F54D10.1
OMA:YSIESND NextBio:880833 Uniprot:G5EE88
Length = 184
Score = 94 (38.1 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 94 VSEDKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKA 153
V + D L+ A+N+LE+ LL C+ A + KG +PEE+R F I D E+EKA
Sbjct: 108 VDIEHDALTDLVNASNFLEVMTLLTYCCKFIAGLAKGMSPEEMRVFFCIPTD--EEDEKA 165
Score = 75 (31.5 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 9 LRSSDNEVFEVEKQVMIQSGTIRNMIED---DAADGE----IPVQ-ISSRNLAKIVEWCK 60
+ S+D V ++ +Q + QS T+ N I + A + E IP++ ++ + L +VEWC+
Sbjct: 23 IESNDRVVLKISEQAIKQSATLSNSITNLGYSAENAESMVPIPIEKVNGKTLKLVVEWCE 82
>WB|WBGene00004820 [details] [associations]
symbol:skr-14 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GeneTree:ENSGT00390000012652
HSSP:P34991 EMBL:FO081134 RefSeq:NP_504220.3
ProteinModelPortal:Q9N3U9 SMR:Q9N3U9 STRING:Q9N3U9
EnsemblMetazoa:Y47D7A.8 GeneID:178839 KEGG:cel:CELE_Y47D7A.8
UCSC:Y47D7A.8 CTD:178839 WormBase:Y47D7A.8 InParanoid:Q9N3U9
OMA:RRERCKC NextBio:902768 ArrayExpress:Q9N3U9 Uniprot:Q9N3U9
Length = 197
Score = 97 (39.2 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 96 EDKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKD 145
ED+ L F L+LA+N+L+I L+ C+ +++ KGKT E+R F I D
Sbjct: 136 EDEAL-FDLILASNFLDIKGLMYYGCKTVSNMAKGKTTAELREIFGINTD 184
Score = 69 (29.3 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 18/62 (29%), Positives = 35/62 (56%)
Query: 8 KLRSSDNEVFEVEKQVMIQSGTIRNMIED--------DAADGEIPV-QISSRNLAKIVEW 58
K+ S+D V ++ ++ + QS T+ N+IE+ + D IPV ++ + + K+ EW
Sbjct: 45 KIISNDGVVTKMSEKAVQQSKTLSNLIENLGYTIENIETRD-PIPVTNVNGKTMEKVAEW 103
Query: 59 CK 60
C+
Sbjct: 104 CE 105
>WB|WBGene00004819 [details] [associations]
symbol:skr-13 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0045132
"meiotic chromosome segregation" evidence=IMP] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 GO:GO:0045132 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:CU457737
EMBL:AF440514 RefSeq:NP_503042.1 UniGene:Cel.18172
ProteinModelPortal:G5EEX4 SMR:G5EEX4 EnsemblMetazoa:C52D10.8
GeneID:178493 KEGG:cel:CELE_C52D10.8 CTD:178493 WormBase:C52D10.8
OMA:KEEDTHA NextBio:901352 Uniprot:G5EEX4
Length = 172
Score = 97 (39.2 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 96 EDKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKD 145
ED+ L F L+LA+N+L+I L+ C+ +++ KGKT E+R F I D
Sbjct: 107 EDEAL-FDLILASNFLDIKGLMYYGCKTVSNMAKGKTTAELREIFGINTD 155
Score = 64 (27.6 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 19/62 (30%), Positives = 35/62 (56%)
Query: 8 KLRSSDNEVFEVEKQVMIQSGTIRNMIED--------DAADGEIPV-QISSRNLAKIVEW 58
K+ SSD V ++ ++ + QS T+ N+IE+ + D IPV ++ + +AK+ E
Sbjct: 16 KIISSDGVVSKMSEKAVQQSKTLSNLIENLGYTIENIETRD-PIPVTNVNGKTMAKVAEL 74
Query: 59 CK 60
C+
Sbjct: 75 CE 76
>WB|WBGene00004812 [details] [associations]
symbol:skr-6 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 Gene3D:3.30.710.10
InterPro:IPR011333 GO:GO:0006511 eggNOG:COG5201
HOGENOM:HOG000172184 KO:K03094 PANTHER:PTHR11165 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 EMBL:AL023837 RefSeq:NP_507574.2
UniGene:Cel.36626 ProteinModelPortal:Q9U2N1 SMR:Q9U2N1
STRING:Q9U2N1 EnsemblMetazoa:Y37H2C.2 GeneID:191763
KEGG:cel:CELE_Y37H2C.2 UCSC:Y37H2C.2 CTD:191763 WormBase:Y37H2C.2
InParanoid:Q9U2N1 OMA:DHIMAAN NextBio:950250 Uniprot:Q9U2N1
Length = 106
Score = 102 (41.0 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 97 DKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKA 153
D++ F L+LAANYL I L D Q A+++K TP +IR F + + E+++
Sbjct: 46 DQNTLFDLVLAANYLNIENLFDVTTQFIANMMKNNTPSQIRARFGVSNKHSSAEDRS 102
Score = 35 (17.4 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 6/19 (31%), Positives = 14/19 (73%)
Query: 43 IPV-QISSRNLAKIVEWCK 60
IP+ ++ ++ KI+E+C+
Sbjct: 4 IPLTKVDAKIFEKIIEYCE 22
>UNIPROTKB|E5RGM3 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=IEA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001232
InterPro:IPR016073 Pfam:PF03931 SMART:SM00512 GO:GO:0005829
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
GO:GO:0019005 PANTHER:PTHR11165 HGNC:HGNC:10899 ChiTaRS:SKP1
EMBL:AC104109 EMBL:AC011336 IPI:IPI00978800
ProteinModelPortal:E5RGM3 SMR:E5RGM3 Ensembl:ENST00000520417
ArrayExpress:E5RGM3 Bgee:E5RGM3 Uniprot:E5RGM3
Length = 102
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 6 TVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGE---IPVQISSRNLA---KIVEWC 59
++KL+SSD E+FEV+ ++ QS TI+ M+ED D E PV + + N A K+++WC
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 60 KCMQHRD 66
H+D
Sbjct: 63 T--HHKD 67
>WB|WBGene00004822 [details] [associations]
symbol:skr-16 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
eggNOG:COG5201 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GeneTree:ENSGT00390000012652
EMBL:FO080771 PIR:T34158 RefSeq:NP_501128.2
ProteinModelPortal:Q18567 SMR:Q18567 STRING:Q18567 PaxDb:Q18567
EnsemblMetazoa:C42D4.6 GeneID:191765 KEGG:cel:CELE_C42D4.6
UCSC:C42D4.6 CTD:191765 WormBase:C42D4.6 HOGENOM:HOG000018058
InParanoid:Q18567 OMA:NMAKGKN NextBio:950258 Uniprot:Q18567
Length = 181
Score = 92 (37.4 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 104 LLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHG 159
L+ A+N L++ L+D C+ A++ KGK P ++R F I D EE + ++E G
Sbjct: 124 LINASNDLQMQQLMDYACKTVANMAKGKNPAQLRELFGILTD--EEEAELALNEPG 177
Score = 61 (26.5 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 9 LRSSDNEVFEVEKQVMIQSGTIRNMIED-DAADGEIPVQ-ISSRNLAKIVEWCKCMQHRD 66
L SSD E F+ + + S + + + D I V+ + L +++EWC HRD
Sbjct: 34 LISSDGEKFQTDGHCIRHSKVLMQASKSLETPDTPIQVEKVQGDTLNRVLEWCN--NHRD 91
>TAIR|locus:2085201 [details] [associations]
symbol:SK6 "AT3G53060" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=TAS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
GO:GO:0019005 eggNOG:COG5201 KO:K03094 PANTHER:PTHR11165
SUPFAM:SSF81382 EMBL:AL132969 EMBL:DQ446762 EMBL:DQ653150
IPI:IPI00533585 PIR:T47563 RefSeq:NP_566978.1 UniGene:At.53910
ProteinModelPortal:Q1PEF6 SMR:Q1PEF6 STRING:Q1PEF6
EnsemblPlants:AT3G53060.1 GeneID:824472 KEGG:ath:AT3G53060
TAIR:At3g53060 InParanoid:Q1PEF6 Genevestigator:Q1PEF6
Uniprot:Q1PEF6
Length = 85
Score = 73 (30.8 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 30 IRNMIEDDAADGEIPV-QISSRNLAKIVEWCK 60
I+ M EDD AD IP+ ++S+ L ++E+CK
Sbjct: 3 IKGMAEDDCADNGIPLPNVTSKILLLVIEYCK 34
Score = 55 (24.4 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 97 DKDLHFGLLLAANYLEIPALLD 118
++ + F +++AANYL I +LLD
Sbjct: 57 EQSILFDVMMAANYLNIQSLLD 78
>TAIR|locus:505006407 [details] [associations]
symbol:SK21 "AT3G61415" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132962
GO:GO:0016567 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 GO:GO:0019005 HSSP:P63208 eggNOG:COG5201
PANTHER:PTHR11165 SUPFAM:SSF81382 HOGENOM:HOG000034103
ProtClustDB:CLSN2689298 EMBL:AY084971 IPI:IPI00527962
IPI:IPI00892309 RefSeq:NP_001118876.1 RefSeq:NP_567113.1
UniGene:At.34286 ProteinModelPortal:Q8LF97 SMR:Q8LF97
EnsemblPlants:AT3G61415.1 GeneID:825314 KEGG:ath:AT3G61415
TAIR:At3g61415 InParanoid:Q8LF97 OMA:MEDDIFT PhylomeDB:Q8LF97
Genevestigator:Q8LF97 Uniprot:Q8LF97
Length = 351
Score = 100 (40.3 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 104 LLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEK 152
L AA+ L++ L+D + A I++GKTPEEIR F++ D T EEEK
Sbjct: 107 LTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLT-EEEK 154
Score = 40 (19.1 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 13/65 (20%), Positives = 33/65 (50%)
Query: 5 STVKLRSSDNEVFEVEKQVMIQSGTI-RNMIEDDAADGE-----IPVQISSRNLAKIVEW 58
S + L ++D + +VE++V + I + +I+ + +P +++ L+ I ++
Sbjct: 16 SYIWLETADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNYAISLPQRVNPAMLSLIFDY 75
Query: 59 CKCMQ 63
C+ Q
Sbjct: 76 CRFHQ 80
>WB|WBGene00004826 [details] [associations]
symbol:skr-20 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GeneTree:ENSGT00390000012652 HSSP:P34991
EMBL:Z50755 EMBL:AF440519 PIR:T24207 RefSeq:NP_510192.1
UniGene:Cel.183 SMR:G5EE98 IntAct:G5EE98 EnsemblMetazoa:R12H7.5
GeneID:181445 KEGG:cel:CELE_R12H7.5 CTD:181445 WormBase:R12H7.5
OMA:FINQKFI NextBio:913974 Uniprot:G5EE98
Length = 173
Score = 92 (37.4 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 102 FGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEE 151
F LL A++ L + L++ C AA++++GK+ EEIR+ + I+ D EE
Sbjct: 105 FALLNASHALGVEDLMNMGCAAAAELIRGKSTEEIRKIYGIRSDEEQMEE 154
Score = 48 (22.0 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 8 KLRSSDNEVFEVEKQVM-----IQSGTIRNMIEDDAADGEIPVQIS--SRNLAKIVEW 58
KL+S D ++F VE+ M I I + + D + P+ + S + ++EW
Sbjct: 11 KLKSEDGQIFNVERGPMKFCAFINQKFIDHGVNDRNCERADPILVPFHSSIVQAVIEW 68
>UNIPROTKB|G5EE98 [details] [associations]
symbol:skr-20 "Protein SKR-20" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GeneTree:ENSGT00390000012652 HSSP:P34991
EMBL:Z50755 EMBL:AF440519 PIR:T24207 RefSeq:NP_510192.1
UniGene:Cel.183 SMR:G5EE98 IntAct:G5EE98 EnsemblMetazoa:R12H7.5
GeneID:181445 KEGG:cel:CELE_R12H7.5 CTD:181445 WormBase:R12H7.5
OMA:FINQKFI NextBio:913974 Uniprot:G5EE98
Length = 173
Score = 92 (37.4 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 102 FGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEE 151
F LL A++ L + L++ C AA++++GK+ EEIR+ + I+ D EE
Sbjct: 105 FALLNASHALGVEDLMNMGCAAAAELIRGKSTEEIRKIYGIRSDEEQMEE 154
Score = 48 (22.0 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 8 KLRSSDNEVFEVEKQVM-----IQSGTIRNMIEDDAADGEIPVQIS--SRNLAKIVEW 58
KL+S D ++F VE+ M I I + + D + P+ + S + ++EW
Sbjct: 11 KLKSEDGQIFNVERGPMKFCAFINQKFIDHGVNDRNCERADPILVPFHSSIVQAVIEW 68
>WB|WBGene00004823 [details] [associations]
symbol:skr-17 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0040018 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0040035 GO:GO:0006511 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:FO080131 GeneTree:ENSGT00390000012652
HSSP:P34991 EMBL:AF440517 PIR:T15426 RefSeq:NP_495638.1
UniGene:Cel.18244 ProteinModelPortal:G5EGN7 SMR:G5EGN7
EnsemblMetazoa:C06A8.4 GeneID:174257 KEGG:cel:CELE_C06A8.4
CTD:174257 WormBase:C06A8.4 OMA:CKTVANS NextBio:883257
Uniprot:G5EGN7
Length = 180
Score = 85 (35.0 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 19/57 (33%), Positives = 31/57 (54%)
Query: 102 FGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFT-PEEEKAVMDE 157
F L+ AA +L++ L++ C+ A+ KGK EE+R F I + + P A D+
Sbjct: 124 FDLITAAYHLDVTGLINYGCKTVANSAKGKNAEEMRELFGIPEPWEQPSTSTATWDD 180
Score = 51 (23.0 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 16/68 (23%), Positives = 33/68 (48%)
Query: 7 VKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGE-------IPVQ-ISSRNLAKIVEW 58
++L SSD + + + + ++ S T+ I + D E +PV + L ++EW
Sbjct: 25 LQLTSSDGHLLQGDIRALLLSSTLAATIRELGYDKEYCAELKPVPVNNVVGFTLKLLIEW 84
Query: 59 CKCMQHRD 66
C +H++
Sbjct: 85 CD--KHKE 90
>UNIPROTKB|E5RI56 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001232
InterPro:IPR016073 Pfam:PF03931 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 PANTHER:PTHR11165
HGNC:HGNC:10899 ChiTaRS:SKP1 EMBL:AC104109 EMBL:AC011336
IPI:IPI00973884 ProteinModelPortal:E5RI56 SMR:E5RI56
Ensembl:ENST00000519718 ArrayExpress:E5RI56 Bgee:E5RI56
Uniprot:E5RI56
Length = 91
Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 6 TVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGE---IPVQISSRNLA 53
++KL+SSD E+FEV+ ++ QS TI+ M+ED D E PV + + N A
Sbjct: 37 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAA 87
>TAIR|locus:2050709 [details] [associations]
symbol:SK20 "AT2G45950" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
GO:GO:0019005 eggNOG:COG5201 PANTHER:PTHR11165 SUPFAM:SSF81382
EMBL:AC004665 EMBL:AF370493 EMBL:AY081697 IPI:IPI00524579
IPI:IPI00846808 IPI:IPI00877396 PIR:T02452 RefSeq:NP_001078065.1
RefSeq:NP_566058.2 UniGene:At.12716 UniGene:At.49380
ProteinModelPortal:A8MQG7 SMR:A8MQG7 IntAct:A8MQG7
EnsemblPlants:AT2G45950.2 GeneID:819203 KEGG:ath:AT2G45950
TAIR:At2g45950 HOGENOM:HOG000034103 InParanoid:A8MQG7 OMA:DEIDPAM
PhylomeDB:A8MQG7 ProtClustDB:CLSN2689298 Genevestigator:A8MQG7
Uniprot:A8MQG7
Length = 352
Score = 95 (38.5 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 104 LLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEK 152
L AA+ L++ L+D + A I++GK PEEIR F++ D T EEEK
Sbjct: 107 LTSAADSLQLKPLVDLTSRALARIIEGKNPEEIREIFHLPDDLT-EEEK 154
Score = 39 (18.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 12/65 (18%), Positives = 34/65 (52%)
Query: 5 STVKLRSSDNEVFEVEKQVMIQSGTI-RNMIEDDAADGE-----IPVQISSRNLAKIVEW 58
S + L+++D + +VE++V + I + +I+ + +P +++ + I+++
Sbjct: 16 SYIWLQTADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNHAISLPQRVNPAMFSLILDY 75
Query: 59 CKCMQ 63
C+ Q
Sbjct: 76 CRFHQ 80
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 164 138 0.00091 102 3 11 22 0.43 31
30 0.45 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 71
No. of states in DFA: 587 (62 KB)
Total size of DFA: 137 KB (2085 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.40u 0.10s 12.50t Elapsed: 00:00:01
Total cpu time: 12.41u 0.10s 12.51t Elapsed: 00:00:01
Start: Sat May 11 11:06:14 2013 End: Sat May 11 11:06:15 2013