BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038532
(164 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O49484|ASK11_ARATH SKP1-like protein 11 OS=Arabidopsis thaliana GN=ASK11 PE=1 SV=1
Length = 152
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 102/161 (63%), Gaps = 12/161 (7%)
Query: 3 TTSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPV-QISSRNLAKIVEWCKC 61
++ + L SSD + FEVE+ V IQS TI +M+EDD IP+ + S+ L K++E+CK
Sbjct: 2 SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCK- 60
Query: 62 MQHRDRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLDRLC 121
H D N + EE+ W++KF + ++ F L+LAANYL I +LLD C
Sbjct: 61 KHHVDEANPIS-------EEDLNNWDEKF---MDLEQSTIFELILAANYLNIKSLLDLTC 110
Query: 122 QLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWAL 162
Q AD++KGKTPEEIR TFNI+ DFTPEEE+AV E+ WA
Sbjct: 111 QTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAF 151
>sp|O65674|ASK12_ARATH SKP1-like protein 12 OS=Arabidopsis thaliana GN=ASK12 PE=1 SV=1
Length = 152
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 102/161 (63%), Gaps = 12/161 (7%)
Query: 3 TTSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPV-QISSRNLAKIVEWCKC 61
++ + L SSD + FEVE+ V IQS TI +M+EDD IP+ + S+ L K++E+CK
Sbjct: 2 SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCK- 60
Query: 62 MQHRDRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLDRLC 121
H D N + EE+ +W++KF + ++ F L+LAANYL I +L D C
Sbjct: 61 KYHVDEANPIS-------EEDLNKWDEKF---MDLEQSTIFELILAANYLNIKSLFDLTC 110
Query: 122 QLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWAL 162
Q AD++KGKTPEEIR TFNI+ DFTPEEE+AV E+ WA
Sbjct: 111 QTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAF 151
>sp|Q9LNT9|ASK4_ARATH SKP1-like protein 4 OS=Arabidopsis thaliana GN=ASK4 PE=1 SV=1
Length = 163
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 101/162 (62%), Gaps = 5/162 (3%)
Query: 3 TTSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPV-QISSRNLAKIVEWCK- 60
T + L+SSD E FE+E+ V ++S TI++MIEDD AD IP+ ++ LAK++E+CK
Sbjct: 4 TKKMIILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCKK 63
Query: 61 CMQHRDRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLDRL 120
++ + D E +E + W+ +F V D+ F L+LAANYL I LLD
Sbjct: 64 HVEAAAEAGGDKDFYGSAENDELKNWDSEF---VKVDQPTLFDLILAANYLNIGGLLDLT 120
Query: 121 CQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWAL 162
C+ AD ++GKTPE++R FNIK D+TPEEE V +E+ WA
Sbjct: 121 CKAVADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAF 162
>sp|Q9FHW7|SKP1B_ARATH SKP1-like protein 1B OS=Arabidopsis thaliana GN=SKP1B PE=1 SV=1
Length = 171
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 103/173 (59%), Gaps = 14/173 (8%)
Query: 1 MATTSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPV-QISSRNLAKIVEWC 59
M+T + L+SSD E FE+++ V ++S TI++MIEDD D IP+ ++S+ L+K++E+C
Sbjct: 1 MSTVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYC 60
Query: 60 K----------CMQHRDRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAAN 109
K +E+ + W+ +F + D+ F L+LAAN
Sbjct: 61 KRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEF---IKVDQGTLFDLILAAN 117
Query: 110 YLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWAL 162
YL I LLD CQ AD++KGKTPEEIR+TFNIK DFTPEEE+ V E+ WA
Sbjct: 118 YLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAF 170
>sp|C5FHU9|SKP1_ARTOC E3 ubiquitin ligase complex SCF subunit sconC OS=Arthroderma otae
(strain ATCC MYA-4605 / CBS 113480) GN=sconC PE=3 SV=1
Length = 165
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 107/165 (64%), Gaps = 7/165 (4%)
Query: 1 MATTSTVK--LRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGE-IPV-QISSRNLAKIV 56
MA T+T K L SSD +E+QV +S I+NM+ED GE IP+ ++ L K++
Sbjct: 1 MAATATSKITLTSSDGVEITIERQVAERSILIKNMLEDLGDSGEAIPIPNVNESVLKKVI 60
Query: 57 EWCKCMQHRDRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPAL 116
EWCK + + ++D + + + +EW++KF + D+++ F ++LAANYL+I AL
Sbjct: 61 EWCKHHKGDPPSTGDDDVDSRRKTTDIDEWDQKF---MQVDQEMLFEIILAANYLDIKAL 117
Query: 117 LDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
LD C+ A+++KGK+PEEIR+TFNI+ DFTPEEE + E+ WA
Sbjct: 118 LDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 162
>sp|D4ARL8|SKP1_ARTBC E3 ubiquitin ligase complex SCF subunit sconC OS=Arthroderma
benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=sconC
PE=3 SV=1
Length = 164
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 108/166 (65%), Gaps = 9/166 (5%)
Query: 1 MATTST--VKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPVQISSRN---LAKI 55
MA+T+T + L SSD +E+QV +S I+NM+ED GE P+ I + N L K+
Sbjct: 1 MASTATNKITLTSSDGVEVTIERQVAERSILIKNMLEDLGDSGE-PIPIPNVNESVLKKV 59
Query: 56 VEWCKCMQHRDRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPA 115
+EWC+ + + ++D + + + +EW++KF + D+++ F ++LAANYL+I A
Sbjct: 60 IEWCEHHKGDPPSTGDDDVDSRRKTTDIDEWDQKF---MQVDQEMLFEIILAANYLDIKA 116
Query: 116 LLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
LLD C+ A+++KGK+PEEIR+TFNI+ DFTPEEE + E+ WA
Sbjct: 117 LLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 162
>sp|Q8TGW7|SKP1_ARTOT E3 ubiquitin ligase complex SCF subunit sconC OS=Arthroderma otae
GN=sconC PE=2 SV=1
Length = 165
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 105/162 (64%), Gaps = 5/162 (3%)
Query: 2 ATTSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGE-IPV-QISSRNLAKIVEWC 59
A TS + L SSD +++QV +S I+NM++D GE IP+ ++ L K++EWC
Sbjct: 4 AATSKITLTSSDGVDITIDRQVAERSILIKNMLKDLGDSGEAIPIPNVNESVLKKVIEWC 63
Query: 60 KCMQHRDRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLDR 119
K + + ++D + + + +EW++KF + D+++ F ++LAANYL+I ALLD
Sbjct: 64 KHHKGDPPSTGDDDVDSRRKTTDIDEWDQKF---MQVDQEMLFEIILAANYLDIKALLDV 120
Query: 120 LCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
C+ A+++KGK+PEEIR+TFNI+ DFTPEEE + E+ WA
Sbjct: 121 GCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 162
>sp|Q557E4|SKP1B_DICDI SCF ubiquitin ligase complex protein SKP1b OS=Dictyostelium
discoideum GN=fpaB-1 PE=1 SV=1
Length = 162
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 102/159 (64%), Gaps = 6/159 (3%)
Query: 5 STVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDA-ADGEIPVQ-ISSRNLAKIVEWCKCM 62
S VKL SSD +VFE+EK++ S TI+NMIED +D IP+ ++S L K++++C+
Sbjct: 2 SLVKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDAPIPLPNVTSTILEKVLDYCR-H 60
Query: 63 QHRDRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLDRLCQ 122
H+ + +D E+ ++ +++ F D+ F L+LAANYL+I LLD C+
Sbjct: 61 HHQHPSPQGDDKKDEKRLDDIPPYDRDF---CKVDQPTLFELILAANYLDIKPLLDVTCK 117
Query: 123 LAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
A++++GKTPEEIR+ FNIK DFTPEEE+ + E+ W
Sbjct: 118 TVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEWC 156
>sp|P52285|SKP1A_DICDI SCF ubiquitin ligase complex protein SKP1a OS=Dictyostelium
discoideum GN=fpaA PE=1 SV=1
Length = 162
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 102/159 (64%), Gaps = 6/159 (3%)
Query: 5 STVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDA-ADGEIPVQ-ISSRNLAKIVEWCKCM 62
S VKL SSD +VFE+EK++ S TI+NMIED +D IP+ ++S L K++++C+
Sbjct: 2 SLVKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDSPIPLPNVTSTILEKVLDYCR-H 60
Query: 63 QHRDRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLDRLCQ 122
H+ + +D E+ ++ +++ F D+ F L+LAANYL+I LLD C+
Sbjct: 61 HHQHPSPQGDDKKDEKRLDDIPPYDRDF---CKVDQPTLFELILAANYLDIKPLLDVTCK 117
Query: 123 LAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
A++++GKTPEEIR+ FNIK DFTPEEE+ + E+ W
Sbjct: 118 TVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEWC 156
>sp|Q39255|SKP1A_ARATH SKP1-like protein 1A OS=Arabidopsis thaliana GN=SKP1A PE=1 SV=1
Length = 160
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 98/157 (62%), Gaps = 4/157 (2%)
Query: 7 VKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPV-QISSRNLAKIVEWCKCMQHR 65
+ L+SSD E FEVE+ V ++S TI +M+EDD D +P+ ++S+ LAK++E+CK
Sbjct: 6 IVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEA 65
Query: 66 DRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLDRLCQLAA 125
+ +++ + W+ F + D+ F L+LAANYL I LLD CQ A
Sbjct: 66 AASKAEAVEGAATSDDDLKAWDADF---MKIDQATLFELILAANYLNIKNLLDLTCQTVA 122
Query: 126 DIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWAL 162
D++KGKTPEEIR TFNIK DFTPEEE+ V E+ WA
Sbjct: 123 DMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAF 159
>sp|Q9SL93|ASK3_ARATH SKP1-like protein 3 OS=Arabidopsis thaliana GN=ASK3 PE=1 SV=1
Length = 163
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 95/162 (58%), Gaps = 5/162 (3%)
Query: 3 TTSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPV-QISSRNLAKIVEWCK- 60
T + L+SSD E FEVE+ V ++S TI++MIEDD D IP+ ++ LAK++E+CK
Sbjct: 4 TKKMIILKSSDGESFEVEEAVAVESQTIKHMIEDDCVDNGIPLPNVTGAILAKVIEYCKK 63
Query: 61 CMQHRDRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLDRL 120
++ + D E E + W+ F V D F LL AANYL I LLD
Sbjct: 64 HVEAAAEAGGDKDFYGSTENHELKTWDNDF---VKVDHPTLFDLLRAANYLNISGLLDLT 120
Query: 121 CQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWAL 162
C+ AD ++GKTP ++R FNIK D+TPEEE V +E+ WA
Sbjct: 121 CKAVADQMRGKTPAQMREHFNIKNDYTPEEEAEVRNENRWAF 162
>sp|A1C9U5|SKP1_ASPCL E3 ubiquitin ligase complex SCF subunit sconC OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=sconC PE=3 SV=1
Length = 159
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 105/161 (65%), Gaps = 8/161 (4%)
Query: 4 TSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGE-IPV-QISSRNLAKIVEWCKC 61
++TV L SSD V++ V +S I+NM+ED GE IP+ ++ L K++EWC
Sbjct: 2 STTVTLTSSDGVDLTVDRDVAERSVLIKNMLEDLGESGEAIPIPNVNEVVLKKVIEWCT- 60
Query: 62 MQHR-DRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLDRL 120
H+ D + +D++ + + +EW++KF + D+++ F ++LAANYL+I ALLD
Sbjct: 61 -HHKNDPPSTGDDDDSRRKTTDIDEWDQKF---MQVDQEMLFEIILAANYLDIKALLDVG 116
Query: 121 CQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
C+ A+++KGK+PEEIR+TFNI+ DFTPEEE + E+ WA
Sbjct: 117 CKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 157
>sp|Q6PEC4|SKP1_RAT S-phase kinase-associated protein 1 OS=Rattus norvegicus GN=Skp1
PE=2 SV=3
Length = 163
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 103/164 (62%), Gaps = 12/164 (7%)
Query: 5 STVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEI---PVQISSRN---LAKIVEW 58
T+KL+SSD E+FEV+ ++ QS TI+ M+ED D E PV + + N L K+++W
Sbjct: 2 PTIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQW 61
Query: 59 CKCMQHRDRNNNNNDN-NKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALL 117
C H+D D+ NKE+ ++ W+++F + D+ F L+LAANYL+I LL
Sbjct: 62 C--THHKDDPPPPEDDENKEKRTDDIPVWDQEF---LKVDQGTLFELILAANYLDIKGLL 116
Query: 118 DRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
D C+ A+++KGKTPEEIR+TFNIK DFT EEE V E+ W
Sbjct: 117 DVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
>sp|Q9WTX5|SKP1_MOUSE S-phase kinase-associated protein 1 OS=Mus musculus GN=Skp1 PE=1
SV=3
Length = 163
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 103/164 (62%), Gaps = 12/164 (7%)
Query: 5 STVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEI---PVQISSRN---LAKIVEW 58
T+KL+SSD E+FEV+ ++ QS TI+ M+ED D E PV + + N L K+++W
Sbjct: 2 PTIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQW 61
Query: 59 CKCMQHRDRNNNNNDN-NKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALL 117
C H+D D+ NKE+ ++ W+++F + D+ F L+LAANYL+I LL
Sbjct: 62 C--THHKDDPPPPEDDENKEKRTDDIPVWDQEF---LKVDQGTLFELILAANYLDIKGLL 116
Query: 118 DRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
D C+ A+++KGKTPEEIR+TFNIK DFT EEE V E+ W
Sbjct: 117 DVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
>sp|Q5KU00|SKP1_ASPOR E3 ubiquitin ligase complex SCF subunit sconC OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=sconC PE=3 SV=1
Length = 161
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 10/162 (6%)
Query: 4 TSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPVQISSRN---LAKIVEWCK 60
T T+ SSD VE+ V +S I+NM+ED GE P+ I + N L K++EWC
Sbjct: 3 TPTLTFTSSDGVDIPVERDVAERSQLIKNMLEDLGETGE-PIPIPNVNEAVLKKVIEWC- 60
Query: 61 CMQHR-DRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLDR 119
H+ D + +D++ + + +EW++KF + D+++ F ++LAANYL+I LLD
Sbjct: 61 -THHKNDPPSTGDDDDSRRKTTDIDEWDQKF---MQVDQEMLFEIILAANYLDIKGLLDV 116
Query: 120 LCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
C+ A+++KGK+PEEIR+TFNI+ DFTPEEE + E+ WA
Sbjct: 117 GCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 158
>sp|B8NSJ0|SKP1_ASPFN E3 ubiquitin ligase complex SCF subunit sconC OS=Aspergillus flavus
(strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722
/ SRRC 167) GN=sconC PE=3 SV=1
Length = 161
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 10/162 (6%)
Query: 4 TSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPVQISSRN---LAKIVEWCK 60
T T+ SSD VE+ V +S I+NM+ED GE P+ I + N L K++EWC
Sbjct: 3 TPTLTFTSSDGVDIPVERDVAERSQLIKNMLEDLGETGE-PIPIPNVNEAVLKKVIEWC- 60
Query: 61 CMQHR-DRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLDR 119
H+ D + +D++ + + +EW++KF + D+++ F ++LAANYL+I LLD
Sbjct: 61 -THHKNDPPSTGDDDDSRRKTTDIDEWDQKF---MQVDQEMLFEIILAANYLDIKGLLDV 116
Query: 120 LCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
C+ A+++KGK+PEEIR+TFNI+ DFTPEEE + E+ WA
Sbjct: 117 GCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 158
>sp|Q0CA59|SKP1_ASPTN E3 ubiquitin ligase complex SCF subunit sconC OS=Aspergillus
terreus (strain NIH 2624 / FGSC A1156) GN=sconC PE=3
SV=1
Length = 161
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 105/164 (64%), Gaps = 8/164 (4%)
Query: 1 MATTSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGE-IPV-QISSRNLAKIVEW 58
M+T+ T+ SSD V++ V +S I+NM+ED GE IP+ ++ L K++EW
Sbjct: 1 MSTSPTLVFTSSDGVDITVDRDVAERSLLIKNMLEDLGETGEAIPIPNVNEAVLKKVIEW 60
Query: 59 CKCMQHR-DRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALL 117
C H+ D + +D++ + + +EW++KF + D+++ F ++LAANYL+I LL
Sbjct: 61 CT--HHKNDPPSTGDDDDSRRKTTDIDEWDQKF---MQVDQEMLFEIILAANYLDIKGLL 115
Query: 118 DRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
D C+ A+++KGK+PEEIR+TFNI+ DFTPEEE + E+ WA
Sbjct: 116 DVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 159
>sp|B6QGB9|SKP1_PENMQ E3 ubiquitin ligase complex SCF subunit sconC OS=Penicillium
marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333)
GN=sconC PE=3 SV=1
Length = 160
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 105/161 (65%), Gaps = 8/161 (4%)
Query: 4 TSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPVQISSRN---LAKIVEWCK 60
+ V L+SSD+ VE+ V +S I+N++ED + E PV I + N L K++EWC
Sbjct: 2 SGQVTLQSSDSVDITVERAVAERSMLIKNLLED-LGESEEPVPIPNVNESVLKKVIEWCT 60
Query: 61 CMQHRDRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLDRL 120
++ ++ +D+N+ E +E W++KF + D+++ F ++LAANYL+I ALLD
Sbjct: 61 HHKNDPQSTGEDDDNRRRTTEIDE-WDQKF---MQVDQEMLFEIILAANYLDIKALLDVG 116
Query: 121 CQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
C+ A+++KGK+PEEIR+TFNI+ DFTPEEE + E+ WA
Sbjct: 117 CKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 157
>sp|Q71U00|SKP1_XENLA S-phase kinase-associated protein 1 OS=Xenopus laevis GN=skp1 PE=1
SV=3
Length = 163
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 103/163 (63%), Gaps = 12/163 (7%)
Query: 6 TVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEI---PVQISSRN---LAKIVEWC 59
++KL+SSD E+FEV+ ++ QS TI+ M+ED D E PV + + N L K+++WC
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 60 KCMQHRDRNNNNNDN-NKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLD 118
H+D D+ NKE+ ++ W+++F + D+ F L+LAANYL+I LLD
Sbjct: 63 --THHKDDPPPPEDDENKEKRTDDIPVWDQEF---LKVDQGTLFELILAANYLDIKGLLD 117
Query: 119 RLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
C+ A+++KGKTPEEIR+TFNIK DFT EEE V E+ W
Sbjct: 118 VTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
>sp|Q5R512|SKP1_PONAB S-phase kinase-associated protein 1 OS=Pongo abelii GN=SKP1 PE=2
SV=1
Length = 163
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 103/163 (63%), Gaps = 12/163 (7%)
Query: 6 TVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEI---PVQISSRN---LAKIVEWC 59
++KL+SSD E+FEV+ ++ QS TI+ M+ED D E PV + + N L K+++WC
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 60 KCMQHRDRNNNNNDN-NKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLD 118
H+D D+ NKE+ ++ W+++F + D+ F L+LAANYL+I LLD
Sbjct: 63 --THHKDDPPPPEDDENKEKRTDDIPVWDQEF---LKVDQGTLFELILAANYLDIKGLLD 117
Query: 119 RLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
C+ A+++KGKTPEEIR+TFNIK DFT EEE V E+ W
Sbjct: 118 VTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
>sp|Q4R5B9|SKP1_MACFA S-phase kinase-associated protein 1 OS=Macaca fascicularis GN=SKP1
PE=2 SV=1
Length = 163
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 103/163 (63%), Gaps = 12/163 (7%)
Query: 6 TVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEI---PVQISSRN---LAKIVEWC 59
++KL+SSD E+FEV+ ++ QS TI+ M+ED D E PV + + N L K+++WC
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 60 KCMQHRDRNNNNNDN-NKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLD 118
H+D D+ NKE+ ++ W+++F + D+ F L+LAANYL+I LLD
Sbjct: 63 --THHKDDPPPPEDDENKEKRTDDIPVWDQEF---LKVDQGTLFELILAANYLDIKGLLD 117
Query: 119 RLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
C+ A+++KGKTPEEIR+TFNIK DFT EEE V E+ W
Sbjct: 118 VTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
>sp|P63208|SKP1_HUMAN S-phase kinase-associated protein 1 OS=Homo sapiens GN=SKP1 PE=1
SV=2
Length = 163
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 103/163 (63%), Gaps = 12/163 (7%)
Query: 6 TVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEI---PVQISSRN---LAKIVEWC 59
++KL+SSD E+FEV+ ++ QS TI+ M+ED D E PV + + N L K+++WC
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 60 KCMQHRDRNNNNNDN-NKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLD 118
H+D D+ NKE+ ++ W+++F + D+ F L+LAANYL+I LLD
Sbjct: 63 --THHKDDPPPPEDDENKEKRTDDIPVWDQEF---LKVDQGTLFELILAANYLDIKGLLD 117
Query: 119 RLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
C+ A+++KGKTPEEIR+TFNIK DFT EEE V E+ W
Sbjct: 118 VTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
>sp|Q5ZKF5|SKP1_CHICK S-phase kinase-associated protein 1 OS=Gallus gallus GN=SKP1 PE=2
SV=1
Length = 163
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 103/163 (63%), Gaps = 12/163 (7%)
Query: 6 TVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEI---PVQISSRN---LAKIVEWC 59
++KL+SSD E+FEV+ ++ QS TI+ M+ED D E PV + + N L K+++WC
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 60 KCMQHRDRNNNNNDN-NKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLD 118
H+D D+ NKE+ ++ W+++F + D+ F L+LAANYL+I LLD
Sbjct: 63 --THHKDDPPPPEDDENKEKRTDDIPVWDQEF---LKVDQGTLFELILAANYLDIKGLLD 117
Query: 119 RLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
C+ A+++KGKTPEEIR+TFNIK DFT EEE V E+ W
Sbjct: 118 VTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
>sp|P63209|SKP1_CAVPO S-phase kinase-associated protein 1 OS=Cavia porcellus GN=SKP1 PE=2
SV=2
Length = 163
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 103/163 (63%), Gaps = 12/163 (7%)
Query: 6 TVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEI---PVQISSRN---LAKIVEWC 59
++KL+SSD E+FEV+ ++ QS TI+ M+ED D E PV + + N L K+++WC
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 60 KCMQHRDRNNNNNDN-NKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLD 118
H+D D+ NKE+ ++ W+++F + D+ F L+LAANYL+I LLD
Sbjct: 63 --THHKDDPPPPEDDENKEKRTDDIPVWDQEF---LKVDQGTLFELILAANYLDIKGLLD 117
Query: 119 RLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
C+ A+++KGKTPEEIR+TFNIK DFT EEE V E+ W
Sbjct: 118 VTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
>sp|Q3ZCF3|SKP1_BOVIN S-phase kinase-associated protein 1 OS=Bos taurus GN=SKP1 PE=2 SV=1
Length = 163
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 103/163 (63%), Gaps = 12/163 (7%)
Query: 6 TVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEI---PVQISSRN---LAKIVEWC 59
++KL+SSD E+FEV+ ++ QS TI+ M+ED D E PV + + N L K+++WC
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 60 KCMQHRDRNNNNNDN-NKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLD 118
H+D D+ NKE+ ++ W+++F + D+ F L+LAANYL+I LLD
Sbjct: 63 --THHKDDPPPPEDDENKEKRTDDIPVWDQEF---LKVDQGTLFELILAANYLDIKGLLD 117
Query: 119 RLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
C+ A+++KGKTPEEIR+TFNIK DFT EEE V E+ W
Sbjct: 118 VTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
>sp|B8MDP8|SKP1_TALSN E3 ubiquitin ligase complex SCF subunit sconC OS=Talaromyces
stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 /
NRRL 1006) GN=sconC PE=3 SV=1
Length = 160
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 102/161 (63%), Gaps = 8/161 (4%)
Query: 4 TSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPVQISSRN---LAKIVEWCK 60
+ V L+SSD VE+ V +S I+N++ED + E PV I + N L K++EWC
Sbjct: 2 SGQVTLQSSDQVNITVERAVAERSMLIKNLLED-LGESEEPVPIPNVNESVLKKVIEWCT 60
Query: 61 CMQHRDRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLDRL 120
++ + D+N+ E +E W++KF + D+++ F ++LAANYL+I ALLD
Sbjct: 61 HHKNDPQTTGEEDDNRRRTTEIDE-WDQKF---MQVDQEMLFEIILAANYLDIKALLDVG 116
Query: 121 CQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
C+ A+++KGK+PEEIR+TFNI+ DFTPEEE + E+ WA
Sbjct: 117 CKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 157
>sp|A1CZG3|SKP1_NEOFI E3 ubiquitin ligase complex SCF subunit sconC OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 /
NRRL 181) GN=sconC PE=3 SV=1
Length = 158
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 104/160 (65%), Gaps = 8/160 (5%)
Query: 5 STVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDA-ADGEIPV-QISSRNLAKIVEWCKCM 62
+TV L SSD V++ V +S I+NM+ED +D IP+ ++ L K++EWC
Sbjct: 2 TTVTLTSSDGVDITVDRDVAERSILIKNMLEDLGESDEAIPIPNVNEVVLKKVIEWCT-- 59
Query: 63 QHR-DRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLDRLC 121
H+ D + +D++ + + +EW++KF + D+++ F ++LAANYL+I ALLD C
Sbjct: 60 HHKNDPPSTGDDDDSRRKTTDIDEWDQKF---MQVDQEMLFEIILAANYLDIKALLDVGC 116
Query: 122 QLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
+ A+++KGK+PEEIR+TFNI+ DFTPEEE + E+ WA
Sbjct: 117 KTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 156
>sp|Q4WTT8|SKP1_ASPFU E3 ubiquitin ligase complex SCF subunit sconC OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=sconC PE=3 SV=1
Length = 158
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 104/160 (65%), Gaps = 8/160 (5%)
Query: 5 STVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDA-ADGEIPV-QISSRNLAKIVEWCKCM 62
+TV L SSD V++ V +S I+NM+ED +D IP+ ++ L K++EWC
Sbjct: 2 TTVTLTSSDGVDITVDRDVAERSILIKNMLEDLGESDEAIPIPNVNEVVLKKVIEWCT-- 59
Query: 63 QHR-DRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLDRLC 121
H+ D + +D++ + + +EW++KF + D+++ F ++LAANYL+I ALLD C
Sbjct: 60 HHKNDPPSTGDDDDSRRKTTDIDEWDQKF---MQVDQEMLFEIILAANYLDIKALLDVGC 116
Query: 122 QLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
+ A+++KGK+PEEIR+TFNI+ DFTPEEE + E+ WA
Sbjct: 117 KTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 156
>sp|B0Y3B5|SKP1_ASPFC E3 ubiquitin ligase complex SCF subunit sconC OS=Neosartorya
fumigata (strain CEA10 / CBS 144.89 / FGSC A1163)
GN=sconC PE=3 SV=1
Length = 158
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 104/160 (65%), Gaps = 8/160 (5%)
Query: 5 STVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDA-ADGEIPV-QISSRNLAKIVEWCKCM 62
+TV L SSD V++ V +S I+NM+ED +D IP+ ++ L K++EWC
Sbjct: 2 TTVTLTSSDGVDITVDRDVAERSILIKNMLEDLGESDEAIPIPNVNEVVLKKVIEWCT-- 59
Query: 63 QHR-DRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLDRLC 121
H+ D + +D++ + + +EW++KF + D+++ F ++LAANYL+I ALLD C
Sbjct: 60 HHKNDPPSTGDDDDSRRKTTDIDEWDQKF---MQVDQEMLFEIILAANYLDIKALLDVGC 116
Query: 122 QLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
+ A+++KGK+PEEIR+TFNI+ DFTPEEE + E+ WA
Sbjct: 117 KTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 156
>sp|O81057|ASK14_ARATH SKP1-like protein 14 OS=Arabidopsis thaliana GN=ASK14 PE=1 SV=1
Length = 149
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 95/161 (59%), Gaps = 15/161 (9%)
Query: 3 TTSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPVQ-ISSRNLAKIVEWCKC 61
+++ + L SSD E FEVE+ V + + +MIEDD E+P+Q ++ + L+ +VE+CK
Sbjct: 2 SSNKIVLSSSDGESFEVEEAVARKLKIVEHMIEDDCVVTEVPLQNVTGKILSIVVEYCK- 60
Query: 62 MQHRDRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLDRLC 121
+ D +E + +EE+ KKFD+ F LLLAANYL I LLD
Sbjct: 61 -------KHVVDEESDEFKTWDEEFMKKFDQPTV------FQLLLAANYLNIKGLLDLSA 107
Query: 122 QLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWAL 162
Q AD +K KTPEEIR FNI+ DFTPEEE AV E+ WA
Sbjct: 108 QTVADRIKDKTPEEIREIFNIENDFTPEEEAAVRKENAWAF 148
>sp|Q9Y709|SKP1_SCHPO Suppressor of kinetochore protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=skp1 PE=1 SV=1
Length = 161
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 106/169 (62%), Gaps = 24/169 (14%)
Query: 5 STVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPV---QISSRNLAKIVEWCKC 61
S +KL SSDNE F V++ + +S I+NM+ED + +P+ +SS L K++EWC+
Sbjct: 2 SKIKLISSDNEEFVVDQLIAERSMLIKNMLED-VGEINVPIPLPNVSSNVLRKVLEWCE- 59
Query: 62 MQHRDRNNNNNDNNKEEEEEEE---------EEWEKKFDEEVSEDKDLHFGLLLAANYLE 112
H+ ND EEE + +EW++KF ++ D+++ F ++LA+NYL+
Sbjct: 60 -HHK------NDLYSGTEEESDIRLKKSTDIDEWDRKF---MAVDQEMLFEIVLASNYLD 109
Query: 113 IPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
I LLD C+ A++++GK+PE+IR+TFNI DFTPEEE+ + E+ WA
Sbjct: 110 IKPLLDTGCKTVANMIRGKSPEDIRKTFNIPNDFTPEEEEQIRKENEWA 158
>sp|Q9M1X5|ASK13_ARATH SKP1-like protein 13 OS=Arabidopsis thaliana GN=ASK13 PE=1 SV=1
Length = 154
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 97/157 (61%), Gaps = 9/157 (5%)
Query: 7 VKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPVQ-ISSRNLAKIVEWCKCMQHR 65
V L SSD E F+VE+ V +QS TI +MIEDD +P+ ++ L+K++E+CK
Sbjct: 5 VMLLSSDGESFQVEEAVAVQSQTIAHMIEDDCVANGVPIANVTGVILSKVIEYCK----- 59
Query: 66 DRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLDRLCQLAA 125
+ +D+ EE ++E ++W+ +F + + + L F ++LAANYL I LLD CQ A
Sbjct: 60 --KHVVSDSPTEESKDELKKWDAEFMKALEQSSTL-FDVMLAANYLNIKDLLDLGCQTVA 116
Query: 126 DIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWAL 162
D++ GK P+EIR I+ DFTPEEE+ + E+ WA
Sbjct: 117 DMITGKKPDEIRALLGIENDFTPEEEEEIRKENQWAF 153
>sp|Q8NK13|SKP1_NEUCR E3 ubiquitin ligase complex SCF subunit scon-3 OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=scon-3 PE=1 SV=1
Length = 171
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 102/160 (63%), Gaps = 8/160 (5%)
Query: 7 VKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADG----EIPV-QISSRNLAKIVEWCKC 61
V L+S+D ++ V++ V +S I+N+IED + IP+ ++ L K+VEWC+
Sbjct: 12 VSLQSNDGQIITVDRVVAERSLLIKNLIEDLGDEAVMNEAIPLPNVNEPVLRKVVEWCEH 71
Query: 62 MQHRDRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLDRLC 121
+ ++N+ ++ E +EW++KF + D+++ F ++LAANY++I LLD C
Sbjct: 72 HRKDPPQTTEDENDSRKKSTEIDEWDQKF---MQVDQEMLFEIILAANYMDIKPLLDVGC 128
Query: 122 QLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
+ A+++KGK+PEEIR+TFNI DFTPEEE+ + E+ WA
Sbjct: 129 KTVANMIKGKSPEEIRKTFNITNDFTPEEEEQIRRENEWA 168
>sp|Q5BAX8|SKP1_EMENI E3 ubiquitin ligase complex SCF subunit sconC OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
NRRL 194 / M139) GN=sconC PE=3 SV=2
Length = 161
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 101/156 (64%), Gaps = 8/156 (5%)
Query: 9 LRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGE-IPVQISSRN-LAKIVEWCKCMQHRD 66
+ S+D + EV + V +S I+NM+ED E IP+ S N L+K++EWC HR+
Sbjct: 8 MTSNDGKNIEVPRDVAERSLLIKNMLEDLGDPTEPIPIPNVSENVLSKVLEWCA--HHRN 65
Query: 67 RNNNNNDNNKEEEEEEE-EEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLDRLCQLAA 125
++ D++ + + EEW++KF + D+++ F ++LAANYL+I LLD C+ A
Sbjct: 66 DPPSSADDDDSRRKTTDIEEWDQKF---MQVDQEMLFEIILAANYLDIKPLLDIGCKTVA 122
Query: 126 DIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
+++KGK+PEEIR+TFNI+ DFTPEEE + E+ WA
Sbjct: 123 NMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 158
>sp|Q9LSX9|ASK9_ARATH SKP1-like protein 9 OS=Arabidopsis thaliana GN=ASK9 PE=1 SV=1
Length = 153
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 94/162 (58%), Gaps = 13/162 (8%)
Query: 3 TTSTVKLRSSDNEVFEVEKQVMIQSGTI-RNMIEDDAADGEIPV-QISSRNLAKIVEWCK 60
+T + L+SSD FEVE++ Q I +M E+D D IP+ ++ + LA ++E+C
Sbjct: 2 STKKIILKSSDGHSFEVEEEAARQCQIIIAHMSENDCTDNGIPLPNVTGKILAMVIEYCN 61
Query: 61 CMQHRDRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLDRL 120
H D N +D++ ++ W+K+F E+ D F L+ AANYL I +L D
Sbjct: 62 -KHHVDAANPCSDDDLKK-------WDKEFMEK---DTSTIFDLIKAANYLNIKSLFDLA 110
Query: 121 CQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWAL 162
CQ A+I+KG TPE+IR FNI+ D TPEEE A+ E+ WA
Sbjct: 111 CQTVAEIIKGNTPEQIREFFNIENDLTPEEEAAIRRENKWAF 152
>sp|O81055|ASK16_ARATH SKP1-like protein 16 OS=Arabidopsis thaliana GN=ASK16 PE=1 SV=1
Length = 170
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 96/169 (56%), Gaps = 9/169 (5%)
Query: 3 TTSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPVQ-ISSRNLAKIVEWCK- 60
+++ + L SSD+E FEVE+ V + I +MI+DD AD IP++ ++ LA ++E+CK
Sbjct: 2 SSNKIVLTSSDDESFEVEEAVARKLKVIAHMIDDDCADKAIPLENVTGNILALVIEYCKK 61
Query: 61 -----CMQHRDRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPA 115
D ++N EE + E W+ +F +E D + L+LA NYL +
Sbjct: 62 HVLDDVDDSDDSTEATSENVNEEAKNELRTWDAEFMKEF--DMETVMKLILAVNYLNVQD 119
Query: 116 LLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWALHD 164
LL CQ AD +K +PEE+R FNI+ D+TPEEE A+ E+ WA D
Sbjct: 120 LLGLTCQTVADHMKDMSPEEVRELFNIENDYTPEEEDAIRKENAWAFED 168
>sp|Q9LSX8|ASK10_ARATH SKP1-like protein 10 OS=Arabidopsis thaliana GN=ASK10 PE=1 SV=1
Length = 152
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 94/161 (58%), Gaps = 12/161 (7%)
Query: 3 TTSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPV-QISSRNLAKIVEWCKC 61
+T + L+SSD FEVE++ Q TI +M EDD D IP+ +++ + L ++E+C
Sbjct: 2 STKKIILKSSDGHSFEVEEEAACQCQTIAHMSEDDCTDNGIPLPEVTGKILEMVIEYCN- 60
Query: 62 MQHRDRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLDRLC 121
H D N +D E+ ++W+K+F E+ + F L++AANYL I +LLD C
Sbjct: 61 KHHVDAANPCSD-------EDLKKWDKEFMEKY---QSTIFDLIMAANYLNIKSLLDLAC 110
Query: 122 QLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWAL 162
Q AD++K T E R+ FNI+ D+T EEE+AV E+ W
Sbjct: 111 QTVADMIKDNTVEHTRKFFNIENDYTHEEEEAVRRENQWGF 151
>sp|P52286|SKP1_YEAST Suppressor of kinetochore protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SKP1 PE=1 SV=2
Length = 194
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 79/120 (65%), Gaps = 6/120 (5%)
Query: 43 IPV-QISSRNLAKIVEWCKCMQHRDRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLH 101
+PV + S L K++EW + HRD N + D++ + + W+++F + D+++
Sbjct: 77 MPVPNVRSSVLQKVIEWAE--HHRDSNFPDEDDDDSRKSAPVDSWDREF---LKVDQEML 131
Query: 102 FGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWA 161
+ ++LAANYL I LLD C++ A++++G++PEEIRRTFNI DFTPEEE A+ E+ WA
Sbjct: 132 YEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIRRENEWA 191
>sp|O81058|ASK19_ARATH SKP1-like protein 19 OS=Arabidopsis thaliana GN=ASK19 PE=1 SV=1
Length = 200
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 98/190 (51%), Gaps = 32/190 (16%)
Query: 3 TTSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPV-QISSRNLAKIVEWCKC 61
++ + L SSD E F+VE+ V + + ++IEDD A +IP+ ++ LAK++E+CK
Sbjct: 2 SSKKIVLTSSDGESFKVEEVVARKLQIVGHIIEDDCATNKIPIPNVTGEILAKVIEYCKK 61
Query: 62 MQHRDRN-----------------------------NNNNDNNKEEEEEEEEEWEKKFDE 92
D + + D+ E+++E+ EW+ KF +
Sbjct: 62 HVEDDDDVVETHESSTKGDKTVEEAKKKPDDVAVPESTEGDDEAEDKKEKLNEWDAKFMK 121
Query: 93 EVSEDKDLHFGLLLAANYLEIPALLDRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEK 152
+ D F ++LAANYL + L D + AD +K TPEE+R FNI+ DFTPEEE+
Sbjct: 122 DF--DIKTIFDIILAANYLNVQGLFDLCSKTIADYIKDMTPEEVRELFNIENDFTPEEEE 179
Query: 153 AVMDEHGWAL 162
A+ +E+ W
Sbjct: 180 AIRNENAWTF 189
>sp|Q9M1X4|ASK5_ARATH SKP1-like protein 5 OS=Arabidopsis thaliana GN=ASK5 PE=1 SV=1
Length = 153
Score = 96.3 bits (238), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 99/166 (59%), Gaps = 20/166 (12%)
Query: 4 TSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPVQ-ISSRNLAKIVEWCKCM 62
++ + L+SSD + FE+++ V +S I +M+ED A IP++ ++S+ L ++++C+
Sbjct: 2 STKIMLKSSDGKSFEIDEDVARKSIAINHMVEDGCATDVIPLRNVTSKILKIVIDYCE-- 59
Query: 63 QHRDRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLDRLCQ 122
+H K +EEE+ +EW+ F + + + + F +++AANYL I +LLD C+
Sbjct: 60 KHV----------KSKEEEDLKEWDADFMKTI--ETTILFDVMMAANYLNIQSLLDLTCK 107
Query: 123 -----LAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWALH 163
L AD++ GKTP+EIR FNI+ D T EE + +E+ WA
Sbjct: 108 TVSDLLQADLLSGKTPDEIRAHFNIENDLTAEEVAKIREENQWAFQ 153
>sp|Q9LSY1|ASK8_ARATH SKP1-like protein 8 OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=1
Length = 152
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 93/161 (57%), Gaps = 12/161 (7%)
Query: 3 TTSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPV-QISSRNLAKIVEWCKC 61
+T + L+SS+ + FE+E++ Q TI +MIE + D I V +++S L ++E+C
Sbjct: 2 STKKIMLKSSEGKTFEIEEETARQCQTIAHMIEAECTDNVILVLKMTSEILEMVIEYCN- 60
Query: 62 MQHRDRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLDRLC 121
H D N +D++ E+ W+K+F E+ DK F L AAN+L +LL
Sbjct: 61 KHHVDAANPCSDDDLEK-------WDKEFMEK---DKSTIFALTNAANFLNNKSLLHLAG 110
Query: 122 QLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWAL 162
Q AD++KG TP+++R FNI+ D TPEEE A+ E+ WA
Sbjct: 111 QTVADMIKGNTPKQMREFFNIENDLTPEEEAAIRRENKWAF 151
>sp|Q1PEL7|ASK15_ARATH SKP1-like protein 15 OS=Arabidopsis thaliana GN=ASK15 PE=2 SV=2
Length = 177
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 101/167 (60%), Gaps = 9/167 (5%)
Query: 3 TTSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPVQISSRNLAKIV-EWCKC 61
+++ + L SSD E F+VE+ V + +++++EDD EIP+Q + N+ IV E+CK
Sbjct: 2 SSNKIVLTSSDGESFQVEEVVARKLQIVKHLLEDDCVINEIPLQNVTGNILSIVLEYCKK 61
Query: 62 MQHRDRNNNNNDNNKEEEEEEE-----EEWEKKFDEEVSEDKDLHFGLLLAANYLEIPAL 116
+++ ++ K+++ ++E + W+ +F + + D + F L+LAANYL + L
Sbjct: 62 HVDDVVDDDASEEPKKKKPDDEAKQNLDAWDAEFMKNI--DMETIFKLILAANYLNVEGL 119
Query: 117 LDRLCQLAADIVKGKTPEEIRRTFNIKKDFT-PEEEKAVMDEHGWAL 162
L CQ AD +K KTPEE+R FNI+ DFT EEE+A+ E+ WA
Sbjct: 120 LGLTCQTVADYIKDKTPEEVRELFNIENDFTHEEEEEAIRKENAWAF 166
>sp|Q9SY65|ASK18_ARATH SKP1-like protein 18 OS=Arabidopsis thaliana GN=ASK18 PE=1 SV=2
Length = 158
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 97/163 (59%), Gaps = 7/163 (4%)
Query: 3 TTSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPVQ-ISSRNLAKIVEWCKC 61
+++ + L SSD E FE+++ V + I +M+ED+ A IP++ ++ L+KI+E+ K
Sbjct: 2 SSNKILLTSSDGESFEIDEAVARKFLIIVHMMEDNCAGEAIPLENVTGDILSKIIEYAKM 61
Query: 62 MQHRDRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLDRLC 121
N + ++ EE ++ + W+ KF E++ D + F ++LAANYL LL
Sbjct: 62 ----HVNEPSEEDEDEEAKKNLDSWDAKFMEKL--DLETIFKIILAANYLNFEGLLGFAS 115
Query: 122 QLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWALHD 164
Q AD +K KTPEE+R FNI+ DFTPEEE+ + E+ W ++
Sbjct: 116 QTVADYIKDKTPEEVREIFNIENDFTPEEEEEIRKENAWTFNE 158
>sp|Q9SL65|ASK17_ARATH SKP1-like protein 17 OS=Arabidopsis thaliana GN=ASK17 PE=1 SV=1
Length = 150
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 91/162 (56%), Gaps = 14/162 (8%)
Query: 3 TTSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPVQ-ISSRNLAKIVEWCKC 61
++ + L SSD+E FE+++ V + + +MI+DD AD I +Q ++ + LA I+E+CK
Sbjct: 2 SSKKIVLTSSDDECFEIDEAVARKMQMVAHMIDDDCADKAIRLQNVTGKILAIIIEYCK- 60
Query: 62 MQHRDRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLDRLC 121
+H D E + E W+ +F + + D D F LL AA+YL + L + +
Sbjct: 61 -KHVD---------DVEAKNEFVTWDAEFVKNI--DMDTLFKLLDAADYLIVIGLKNLIA 108
Query: 122 QLAADIVKGKTPEEIRRTFNIKKDFTPEEEKAVMDEHGWALH 163
Q AD KT EIR FNI+ D+TPEEE+ + ++ WA +
Sbjct: 109 QAIADYTADKTVNEIRELFNIENDYTPEEEEELRKKNEWAFN 150
>sp|Q9LSY0|ASK7_ARATH SKP1-like protein 7 OS=Arabidopsis thaliana GN=ASK7 PE=2 SV=1
Length = 125
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 70/127 (55%), Gaps = 12/127 (9%)
Query: 3 TTSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPVQ-ISSRNLAKIVEWCKC 61
+T + L+SSD ++FE+E++ Q TI +MIE + D IPV ++S L ++E+C
Sbjct: 2 STKKIMLKSSDGKMFEIEEETARQCQTIAHMIEAECTDNVIPVSNVTSEILEMVIEYCN- 60
Query: 62 MQHRDRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLDRLC 121
H D N +D E+ ++W+K+F E +D+ F L+ AA L I +LL
Sbjct: 61 KHHVDAANPCSD-------EDLKKWDKEFME---KDQYTIFHLMNAAYDLHIKSLLALAY 110
Query: 122 QLAADIV 128
Q AD+V
Sbjct: 111 QTVADMV 117
>sp|Q8LF97|ASK21_ARATH SKP1-like protein 21 OS=Arabidopsis thaliana GN=ASK21 PE=2 SV=1
Length = 351
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 77/153 (50%), Gaps = 20/153 (13%)
Query: 5 STVKLRSSDNEVFEVEKQVMIQSGTI-RNMIEDDAADGE-----IPVQISSRNLAKIVEW 58
S + L ++D + +VE++V + I + +I+ + +P +++ L+ I ++
Sbjct: 16 SYIWLETADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNYAISLPQRVNPAMLSLIFDY 75
Query: 59 CKCMQHRDRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLD 118
C+ Q R+N +E + +++KF + D L AA+ L++ L+D
Sbjct: 76 CRFHQVPGRSN-----------KERKVYDEKF---IRMDTKRLCELTSAADSLQLKPLVD 121
Query: 119 RLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEE 151
+ A I++GKTPEEIR F++ D T EE+
Sbjct: 122 LTSRALARIIEGKTPEEIREIFHLPDDLTEEEK 154
>sp|Q1PEF6|ASK6_ARATH SKP1-like protein 6 OS=Arabidopsis thaliana GN=ASK6 PE=3 SV=1
Length = 85
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 55/90 (61%), Gaps = 15/90 (16%)
Query: 30 IRNMIEDDAADGEIPV-QISSRNLAKIVEWCKCMQHRDRNNNNNDNNKEEEEEEEEEWEK 88
I+ M EDD AD IP+ ++S+ L ++E+CK +H E +EE+ ++W+
Sbjct: 3 IKGMAEDDCADNGIPLPNVTSKILLLVIEYCK--KHV----------VESKEEDLKKWDA 50
Query: 89 KFDEEVSEDKDLHFGLLLAANYLEIPALLD 118
+F +++ ++ + F +++AANYL I +LLD
Sbjct: 51 EFMKKM--EQSILFDVMMAANYLNIQSLLD 78
>sp|A8MQG7|ASK20_ARATH SKP1-like protein 20 OS=Arabidopsis thaliana GN=ASK20 PE=2 SV=1
Length = 352
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 77/153 (50%), Gaps = 20/153 (13%)
Query: 5 STVKLRSSDNEVFEVEKQVMIQSGTI-RNMIEDDAADGE-----IPVQISSRNLAKIVEW 58
S + L+++D + +VE++V + I + +I+ + +P +++ + I+++
Sbjct: 16 SYIWLQTADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNHAISLPQRVNPAMFSLILDY 75
Query: 59 CKCMQHRDRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLD 118
C+ Q R+N +E + ++++F + D L AA+ L++ L+D
Sbjct: 76 CRFHQLPGRSN-----------KERKTYDERF---IRMDTKRLCELTSAADSLQLKPLVD 121
Query: 119 RLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEE 151
+ A I++GK PEEIR F++ D T EE+
Sbjct: 122 LTSRALARIIEGKNPEEIREIFHLPDDLTEEEK 154
>sp|Q751F9|ELOC_ASHGO Elongin-C OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC
9923 / NRRL Y-1056) GN=ELC1 PE=3 SV=1
Length = 100
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 23/118 (19%)
Query: 1 MATTSTVKLRSSDNEVFEVEKQVMIQSGTIRNMIEDDAADGE-----IPVQISSRNLAKI 55
M TS V L SSD + FEV ++ + S T+ M++ A+ + +P I S LAK+
Sbjct: 1 MTPTSHVTLVSSDGKSFEVPRERAMLSPTLAKMLDSSFAEAKEAKVTLPT-IESSMLAKV 59
Query: 56 VEWCKCMQHRDRNNNNNDNNKEEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEI 113
VE+ + ++ ++ D + E E + LLLAA+YL+I
Sbjct: 60 VEYLEYLEEYKHKDDGEDIPQFEVPPE-----------------ISLELLLAADYLQI 100
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.129 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,931,881
Number of Sequences: 539616
Number of extensions: 2959109
Number of successful extensions: 79249
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 277
Number of HSP's that attempted gapping in prelim test: 56727
Number of HSP's gapped (non-prelim): 16522
length of query: 164
length of database: 191,569,459
effective HSP length: 108
effective length of query: 56
effective length of database: 133,290,931
effective search space: 7464292136
effective search space used: 7464292136
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 56 (26.2 bits)