BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038533
(337 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XGN1|TTG1_ARATH Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana GN=TTG1
PE=1 SV=1
Length = 341
Score = 550 bits (1416), Expect = e-156, Method: Compositional matrix adjust.
Identities = 267/345 (77%), Positives = 306/345 (88%), Gaps = 12/345 (3%)
Query: 1 MENSSQESHLRSENSVTHESPYPLYAMAVC------GQRIAVGSFIEDYTNRVDVVSFEP 54
M+NS+ +S RSE +VT++SPYPLYAMA G RIAVGSF+EDY NR+D++SF+
Sbjct: 1 MDNSAPDSLSRSETAVTYDSPYPLYAMAFSSLRSSSGHRIAVGSFLEDYNNRIDILSFDS 60
Query: 55 ESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSGDFLRLWDVGD--SSIE 112
+S+++K P+LSF+HPYPPTKLMF P S R SS + LLASSGDFLRLW++ + S++E
Sbjct: 61 DSMTVKPLPNLSFEHPYPPTKLMFSPPSLRRPSSGD--LLASSGDFLRLWEINEDSSTVE 118
Query: 113 PVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEV 172
P++VLNNSK+SEFCAPLTSFDWN++EPKR+GTCSIDTTCTIWDIEK VVETQLIAHDKEV
Sbjct: 119 PISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEV 178
Query: 173 YDICWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 232
+DI WGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI
Sbjct: 179 HDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 238
Query: 233 LMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPP 292
LMDSNKVVILDIRSPT+PVAELERH+A VNAIAWAPQS +HICS GDD+QA IWELP
Sbjct: 239 LMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPT-- 296
Query: 293 VAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337
VAGPNGIDPMS+YSAGSEINQLQWS +QPDW+ IAF+NKMQLL+V
Sbjct: 297 VAGPNGIDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341
>sp|Q9LPV9|LWD1_ARATH WD repeat-containing protein LWD1 OS=Arabidopsis thaliana GN=LWD1
PE=2 SV=1
Length = 346
Score = 415 bits (1066), Expect = e-115, Method: Compositional matrix adjust.
Identities = 205/344 (59%), Positives = 258/344 (75%), Gaps = 12/344 (3%)
Query: 1 MENSSQESHLRSENSVTHESPYPLYAMAVCGQR-----IAVGSFIEDYTNRVDVVSFEPE 55
+++ S E RSE T+E+P+ +YAM +R +A+ S +E Y NRV++V +
Sbjct: 8 IQDGSDEQQKRSE-IYTYEAPWHIYAMNWSVRRDKKYRLAITSLLEQYPNRVEIVQLDES 66
Query: 56 SLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSGDFLRLWDVGD--SSIEP 113
+ I++ P+LSF+HPYPPTK +F P+ ++ LLA+S DFLRLW + D S +E
Sbjct: 67 NGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPD----LLATSSDFLRLWRIADDHSRVEL 122
Query: 114 VAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVY 173
+ LN++K+SEFC PLTSFDWNE EP+RIGT S DTTCTIWDIE+ V+TQLIAHDKEV+
Sbjct: 123 KSCLNSNKNSEFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVF 182
Query: 174 DICWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATIL 233
DI WG VFASVSADGSVR+FDLRDKEHSTIIYES +PDTPL+RL WNKQD RYMATI+
Sbjct: 183 DIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATII 242
Query: 234 MDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPV 293
MDS KVV+LDIR P LPV EL+RH+A VNAIAWAP S HIC+ GDDSQA IW++
Sbjct: 243 MDSAKVVVLDIRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSMGQ 302
Query: 294 AGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337
G+DP+ Y+AG+EI QLQWS +QPDW+AIAFS K+Q+L+V
Sbjct: 303 HVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346
>sp|Q38960|LWD2_ARATH WD repeat-containing protein LWD2 OS=Arabidopsis thaliana GN=LWD2
PE=2 SV=1
Length = 346
Score = 409 bits (1051), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/344 (59%), Positives = 254/344 (73%), Gaps = 12/344 (3%)
Query: 1 MENSSQESHLRSENSVTHESPYPLYAMAVC-----GQRIAVGSFIEDYTNRVDVVSFEPE 55
++N S+E RSE T+E+P+ +YAM R+A+ S IE Y NRV++V +
Sbjct: 8 IQNGSEEQSKRSE-IYTYEAPWQIYAMNWSIRRDKKYRLAITSLIEQYPNRVEIVQLDES 66
Query: 56 SLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSGDFLRLWDVGD--SSIEP 113
+ I++ P+L F+HPYPPTK F P+ K LLA+S DFLRLW + D S +E
Sbjct: 67 NGEIRSDPNLCFEHPYPPTKTSFIPD----KECQRPDLLATSSDFLRLWRISDDESRVEL 122
Query: 114 VAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVY 173
+ L++ K+SEF P+TSFDWNE EP+RIGT SIDTTCTIWDIE+ VV+TQLIAHDKEVY
Sbjct: 123 KSCLSSDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVY 182
Query: 174 DICWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATIL 233
DI WG VFASVS DGSVR+FDLRDKEHSTIIYES +P TPL+RL+WNKQD RYMAT++
Sbjct: 183 DIAWGGVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVI 242
Query: 234 MDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPV 293
M S K+V+LDIR P LPV EL+RH+A VNAIAWAP S HICS GDDSQA IW++
Sbjct: 243 MGSAKIVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQ 302
Query: 294 AGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337
G+DP+ Y+AG+E+ QLQWS +QPDW+AIAFSNK+Q+L+V
Sbjct: 303 HVEGGLDPILAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILRV 346
>sp|Q552R1|DCAF7_DICDI DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium
discoideum GN=wdr68 PE=3 SV=2
Length = 325
Score = 339 bits (869), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 180/330 (54%), Positives = 235/330 (71%), Gaps = 21/330 (6%)
Query: 17 THESPYPLYAMAVCGQ-----RIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPY 71
T+ SP+ +Y ++ + R+A+GSF+EDYTNRVDV+ E+ + F+HPY
Sbjct: 8 TYNSPWVIYGLSWSSRVNRPFRLAIGSFLEDYTNRVDVIQLNEETDQFEV--VCGFEHPY 65
Query: 72 PPTKLMFDPNSSSRKSSSNRHLLASSGDFLRLWDVGDS--SIEPVAVLNNSKSSEFCAPL 129
PPTK M+ P+ K+S+ LLA++GD+LRLW+VG + SI+ ++L N S EFCAPL
Sbjct: 66 PPTKCMWIPD----KNSNRPDLLATTGDYLRLWEVGSNQRSIKLKSLLTNVIS-EFCAPL 120
Query: 130 TSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGEAR-VFASVSA 188
+SFDWNE +P + T SIDTTCTIW+IE G +TQLIAHDKEV+DI + +FASV A
Sbjct: 121 SSFDWNETDPSLLATSSIDTTCTIWNIETGQAKTQLIAHDKEVFDIAFARGTDLFASVGA 180
Query: 189 DGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPT 248
DGS+R+FDLR+ EHSTIIYE+P PLLRL WNKQD Y+ATI DS KV+ILDIR P+
Sbjct: 181 DGSLRMFDLRNLEHSTIIYETPS-FVPLLRLCWNKQDPNYLATIQQDSPKVIILDIRVPS 239
Query: 249 LPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGI-DPMSMYSA 307
+P AEL H++ VN I+WAP S HIC+V DD QA IW+L + P I DP+ Y+A
Sbjct: 240 VPAAELVFHKSAVNGISWAPHSSCHICTVSDDKQALIWDLS----SMPKPIEDPLLTYNA 295
Query: 308 GSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337
+EINQL WS +QPDW+AIAFS+ +Q+LKV
Sbjct: 296 LAEINQLSWSSSQPDWIAIAFSSHLQILKV 325
>sp|P61963|DCAF7_MOUSE DDB1- and CUL4-associated factor 7 OS=Mus musculus GN=Dcaf7 PE=2
SV=1
Length = 342
Score = 337 bits (864), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 177/349 (50%), Positives = 230/349 (65%), Gaps = 30/349 (8%)
Query: 9 HLRSENSVTHESPYPLYAMAVCGQ-----RIAVGSFIEDYTNRVDVVSFEPESLSIKTHP 63
H + + +E+P+ +YAM + R+A+GSF+E+Y N+V +V + ES
Sbjct: 4 HGKRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRN 63
Query: 64 SLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSGDFLRLWDVGDSSIEPVAVLNNSKSS 123
+ FDHPYP TKLM+ P++ LLA+SGD+LR+W VG++ +LNN+K+S
Sbjct: 64 T--FDHPYPTTKLMWIPDTKGVYPD----LLATSGDYLRVWRVGETETRLECLLNNNKNS 117
Query: 124 EFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVV-----------ETQLIAHDKEV 172
+FCAPLTSFDWNE++P +GT SIDTTCTIW +E G V +TQLIAHDKEV
Sbjct: 118 DFCAPLTSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEV 177
Query: 173 YDICW----GEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRY 228
YDI + G +FASV ADGSVR+FDLR EHSTIIYE PQ PLLRL WNKQD Y
Sbjct: 178 YDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQ-HHPLLRLCWNKQDPNY 236
Query: 229 MATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWEL 288
+AT+ MD +VVILD+R P PVA L HRACVN IAWAP S HIC+ DD QA IW++
Sbjct: 237 LATMAMDGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDI 296
Query: 289 PLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337
P A DP+ Y+A EIN +QW+ QPDW+AI ++N +++L+V
Sbjct: 297 QQMPRAIE---DPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV 342
>sp|P61962|DCAF7_HUMAN DDB1- and CUL4-associated factor 7 OS=Homo sapiens GN=DCAF7 PE=1
SV=1
Length = 342
Score = 337 bits (864), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 177/349 (50%), Positives = 230/349 (65%), Gaps = 30/349 (8%)
Query: 9 HLRSENSVTHESPYPLYAMAVCGQ-----RIAVGSFIEDYTNRVDVVSFEPESLSIKTHP 63
H + + +E+P+ +YAM + R+A+GSF+E+Y N+V +V + ES
Sbjct: 4 HGKRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRN 63
Query: 64 SLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSGDFLRLWDVGDSSIEPVAVLNNSKSS 123
+ FDHPYP TKLM+ P++ LLA+SGD+LR+W VG++ +LNN+K+S
Sbjct: 64 T--FDHPYPTTKLMWIPDTKGVYPD----LLATSGDYLRVWRVGETETRLECLLNNNKNS 117
Query: 124 EFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVV-----------ETQLIAHDKEV 172
+FCAPLTSFDWNE++P +GT SIDTTCTIW +E G V +TQLIAHDKEV
Sbjct: 118 DFCAPLTSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEV 177
Query: 173 YDICW----GEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRY 228
YDI + G +FASV ADGSVR+FDLR EHSTIIYE PQ PLLRL WNKQD Y
Sbjct: 178 YDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQ-HHPLLRLCWNKQDPNY 236
Query: 229 MATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWEL 288
+AT+ MD +VVILD+R P PVA L HRACVN IAWAP S HIC+ DD QA IW++
Sbjct: 237 LATMAMDGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDI 296
Query: 289 PLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337
P A DP+ Y+A EIN +QW+ QPDW+AI ++N +++L+V
Sbjct: 297 QQMPRAIE---DPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV 342
>sp|O74763|YBE8_SCHPO Uncharacterized WD repeat-containing protein C17D11.08
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC17D11.08 PE=1 SV=1
Length = 435
Score = 182 bits (461), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/368 (34%), Positives = 176/368 (47%), Gaps = 67/368 (18%)
Query: 34 IAVGSFIEDYTNRVDVVSF--EPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNR 91
IA+GS E+ N + ++ + S + D YP TKL+++P SS S+++
Sbjct: 69 IAMGSLNEEPNNMIQLLKLITGDDGNSHLEKAQAATDLEYPVTKLLWNP--SSVGSNTDS 126
Query: 92 HLLASSGDFLRLWDVG-----DSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCS 146
LLAS+ LRLW DS + A L+ + APLTSFDW + +P I S
Sbjct: 127 QLLASTDQQLRLWKTDFEAGIDSPLLCQASLSTHVKTHNNAPLTSFDWCKTDPSYIVVSS 186
Query: 147 IDTTCTIWDIEKGVVETQLIAHDKEVYDICW--GEARVFASVSADGSVRIFDLRDKEHST 204
+DTTCT+WDI +TQLIAHDKEVYD+ + VF SV ADGSVR+FDLR +HST
Sbjct: 187 LDTTCTVWDIVAQQSKTQLIAHDKEVYDVAFLKDSINVFVSVGADGSVRMFDLRSLDHST 246
Query: 205 IIYE---------------SPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTL 249
IIYE SP PLLRL+ D+ MAT +S+ V ++DIR P
Sbjct: 247 IIYEGDSTFWKRNGDYTNASPPVSAPLLRLSACDSDVNLMATFHHNSSDVQMIDIRVPGT 306
Query: 250 PVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLP------------------ 291
A L H+ VNA+ W P S+ + + GDD +W+L P
Sbjct: 307 AYATLRGHKGDVNAVKWMPGSKSKLATCGDDCVVSLWDLDQPVNPSPAPTLSVSGTTPGM 366
Query: 292 ----------------------PVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFS 329
P+ N P+ + E+N L WS + D LA+ +
Sbjct: 367 TGSTSEYVTPVSSVNSMRETASPLNADNQYSPLLSWKLEHEVNNLSWS-VKNDGLAVVYG 425
Query: 330 NKMQLLKV 337
+++LKV
Sbjct: 426 KSLEILKV 433
>sp|Q12523|YP247_YEAST WD repeat-containing protein YPL247C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YPL247C PE=1 SV=1
Length = 523
Score = 160 bits (406), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 126/407 (30%), Positives = 182/407 (44%), Gaps = 96/407 (23%)
Query: 18 HESPYPLYAMA-VCGQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKL 76
++S YPL+ + + +GS+ ED N++ V+ + LS ++ + D YP +K+
Sbjct: 125 YQSHYPLFGLDWSADDYVCLGSYKEDSRNKLQVL-HSNDLLSWES--VVDADVVYPVSKI 181
Query: 77 MFDPNSSSRKSSSNRHLLASSGDFLRLWDVGDSSIE----------------PV--AVLN 118
+ P+ + LA+ D LR+W V + P A +
Sbjct: 182 QWVPSQLYPRK------LATCSDSLRIWSVSPEERQFQEQINLSLCKYNRQHPANPAAAD 235
Query: 119 NSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKG-VVETQLIAHDKEVYDICW 177
+ K P+TSFDWN ++ I + SIDTTC +WD++ V+TQLIAHD EV+D+ +
Sbjct: 236 DMKVIGTFPPITSFDWNTVDTNLIISSSIDTTCIVWDLQSSHYVKTQLIAHDSEVFDVRF 295
Query: 178 --GEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPD---------TP-------LLRL 219
++FAS DGSVR+FDLR HSTIIYE P TP LLRL
Sbjct: 296 LTKSTQLFASCGGDGSVRVFDLRSLAHSTIIYEPPSSSVSGATAGTITPSSKGSDALLRL 355
Query: 220 AWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGD 279
+ D +AT DSNK++ILD+R+P P+ L+ H + VN I W P R + S GD
Sbjct: 356 EPSPYDPNVLATFAADSNKIIILDMRNPESPILNLQGHGSSVNGIKWHPTKRNVLLSCGD 415
Query: 280 DSQAFIWEL------------PLPPVAG-----PNGIDPMSMYSAGS------------- 309
D Q W+L P + G P+G M+ AGS
Sbjct: 416 DCQVLYWDLNSSFMEINAAGSKSPSIHGTSLEDPDGDTEMTDGGAGSGLNEDPLSLNNNS 475
Query: 310 -------------------EINQLQWSPAQPDWLAIAFSNKMQLLKV 337
EIN + W P + DW K Q ++V
Sbjct: 476 KQVCKTLETPNMMYANKTQEINNIAWRPQRGDWFGCVSGKKFQNVRV 522
>sp|Q75C99|HAT2_ASHGO Histone acetyltransferase type B subunit 2 OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=HAT2 PE=3 SV=1
Length = 423
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 95/191 (49%), Gaps = 15/191 (7%)
Query: 144 TCSIDTTCTIWDIEKGVV-ETQLIAHDKEVYDICWGE--ARVFASVSADGSVRIFDLRDK 200
+ S DTT +WDIE ++ L +HD V D+ W E + VF +VS D ++++ D R +
Sbjct: 204 SGSDDTTVALWDIEAAKKPKSILTSHDDIVNDVKWHEFESNVFGTVSEDKTLQVHDKRVR 263
Query: 201 EHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRAC 260
+ + P +P L+++K +A +DS ++ + D+R + P+ + H+
Sbjct: 264 LEP--VKKLPTA-SPFNTLSFSKHSRNLLAAAGVDS-QIYLYDMRDMSSPLHVMSGHQDS 319
Query: 261 VNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVA-----GPNGIDPMSMYSAG--SEINQ 313
V + ++P + ICS G D +A IW+L +G + M AG S +N+
Sbjct: 320 VTTVEFSPHTDGIICSSGSDRRAIIWDLTQIGAEQSQDDADDGAPELMMMHAGHRSPVNE 379
Query: 314 LQWSPAQPDWL 324
++P P WL
Sbjct: 380 FSFNPQIP-WL 389
>sp|Q9XF57|PEX7_ARATH Peroxisome biogenesis protein 7 OS=Arabidopsis thaliana GN=PEX7
PE=1 SV=2
Length = 317
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 6/166 (3%)
Query: 124 EFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWG--EAR 181
E + S D+N T S D T +W +++ H VY W
Sbjct: 104 EHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGD 163
Query: 182 VFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVI 241
VFAS S D ++RI+D+R+ + II P D +L WNK D +AT +D V +
Sbjct: 164 VFASASGDCTLRIWDVREPGSTMII---PAHDFEILSCDWNKYDDCILATSSVDKT-VKV 219
Query: 242 LDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWE 287
D+RS +P+A L H V + ++P R I S D +W+
Sbjct: 220 WDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWD 265
Score = 36.6 bits (83), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 56/146 (38%), Gaps = 26/146 (17%)
Query: 159 GVVETQLIAHDKEVYDICWGEAR--VFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPL 216
GV E+ VYD+CW E+ V + DGSV+I+D P P P+
Sbjct: 50 GVTESVSYDTADAVYDVCWSESHDSVLIAAIGDGSVKIYDT----------ALPPPSNPI 99
Query: 217 LRLAWNKQDLR-----------YMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIA 265
+ ++++ ++ + D+ K+ +D + V + H CV
Sbjct: 100 RSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPA---SVRTFKEHAYCVYQAV 156
Query: 266 WAPQSRRHICSVGDDSQAFIWELPLP 291
W P+ S D IW++ P
Sbjct: 157 WNPKHGDVFASASGDCTLRIWDVREP 182
>sp|Q810D6|GRWD1_MOUSE Glutamate-rich WD repeat-containing protein 1 OS=Mus musculus
GN=Grwd1 PE=2 SV=2
Length = 446
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 22/214 (10%)
Query: 131 SFDWNEIEPKRIGTCSIDTTCTIWDIEKG----VVETQLIAHDKEVYDICWG--EARVFA 184
+ DW+ P R+ T +W +G V + + H + V D+ W E VFA
Sbjct: 219 ALDWSPRVPGRLLTGDCQKNVHLWTPTEGGSWNVDQRPFVGHTRSVEDLQWSPTEDTVFA 278
Query: 185 SVSADGSVRIFDLRDK-EHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILD 243
S SAD S+RI+D+R + ++ + D + ++W++++ ++ D + + D
Sbjct: 279 SCSADASIRIWDIRAAPGKACMLTTATAHDGDVNVISWSRREPFLLSG--GDDGALKVWD 336
Query: 244 IR--SPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLP--PVAGPNGI 299
+R PVA ++H A V ++ W PQ + G D+Q W+L + P +G
Sbjct: 337 LRQFKSGSPVATFKQHMAPVTSVEWHPQDSGVFAASGADNQITQWDLAVERDPESGETET 396
Query: 300 DP---------MSMYSAGSEINQLQWSPAQPDWL 324
DP + ++ +++ +L W P P L
Sbjct: 397 DPGLAALPQQLLFVHQGETDLKELHWHPQCPGVL 430
>sp|Q9P783|RRB1_SCHPO Ribosome assembly protein rrb1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rrb1 PE=1 SV=1
Length = 480
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 20/171 (11%)
Query: 165 LIAHDKEVYDICWG--EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWN 222
++H V D+ W E VF+S S DG+ RI+D+R+K+ ++ + + P + L+WN
Sbjct: 287 FLSHTAAVEDLQWSPSEKNVFSSCSCDGTFRIWDVRNKQKTSALTVNAHPGVDVNVLSWN 346
Query: 223 KQDLRYMATILMDSNKVVILDIR------SPTLPVAELERHRACVNAIAWAPQSRRHICS 276
+ +AT D+ + D+R S PVA + HRA + +I W P I
Sbjct: 347 TRVPNLLAT-GADNGVWSVWDLRSLKSSSSVATPVASFKWHRAPIYSIEWHPNEDSVIGV 405
Query: 277 VGDDSQAFIWELPLP---------PVAGPNGIDP--MSMYSAGSEINQLQW 316
VG D+Q +W+L + G + P M ++ EI ++ W
Sbjct: 406 VGADNQISLWDLSVELDEEEQDSRAAEGLQDVPPQLMFIHMGQQEIKEMHW 456
>sp|Q5XI13|GRWD1_RAT Glutamate-rich WD repeat-containing protein 1 OS=Rattus norvegicus
GN=Grwd1 PE=2 SV=1
Length = 445
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 22/214 (10%)
Query: 131 SFDWNEIEPKRIGTCSIDTTCTIWDIEKG----VVETQLIAHDKEVYDICWG--EARVFA 184
+ DW+ P R+ T +W G V + + H + V D+ W E VFA
Sbjct: 218 ALDWSPRVPGRLLTGDCQKNIHLWTPTDGGSWNVDQRPFVGHTRSVEDLQWSPTEDTVFA 277
Query: 185 SVSADGSVRIFDLRDK-EHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILD 243
S SAD S+RI+D+R + ++ + D + ++W++++ ++ D + + D
Sbjct: 278 SCSADASIRIWDIRAAPGKACMLTTAAAHDGDVNVISWSRREPFLLSG--GDDGTLKVWD 335
Query: 244 IR--SPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLP--PVAGPNGI 299
+R PVA ++H A V ++ W PQ + G D+Q W+L + P +G
Sbjct: 336 LRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQWDLAVERDPESGETET 395
Query: 300 DP---------MSMYSAGSEINQLQWSPAQPDWL 324
DP + ++ +++ +L W P P L
Sbjct: 396 DPGLAALPQQLLFVHQGETDLKELHWHPQCPGVL 429
>sp|Q54WA3|PEX7_DICDI Peroxisomal targeting signal 2 receptor OS=Dictyostelium discoideum
GN=pex7 PE=3 SV=1
Length = 316
Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 82/200 (41%), Gaps = 13/200 (6%)
Query: 92 HLLASSGDF-LRLWDV-GDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDT 149
H+ +SSGD +++WD S P+ E + S DWN + T S D
Sbjct: 73 HVASSSGDGSIKIWDTQAPSGGRPIKSF-----EEHTKEVYSVDWNLVTKDTFITGSWDQ 127
Query: 150 TCTIWDIEKGVVETQLIAHDKEVYDICWG--EARVFASVSADGSVRIFDLRDKEHSTIIY 207
+ IW+ H +Y W A +FASVS D +++I+D RD I
Sbjct: 128 SIKIWNPRMDRSLKTFREHRYCIYSAIWSPRNAHLFASVSGDRTLKIWDSRDNRSLNTI- 186
Query: 208 ESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWA 267
D +L WNK + + + T +D + I DIR P P L H V I +
Sbjct: 187 --KAHDHEILTCDWNKYNDKEVVTGSVDKT-IRIWDIRYPDRPTTILRGHTYAVRRIKCS 243
Query: 268 PQSRRHICSVGDDSQAFIWE 287
P S + S D +W+
Sbjct: 244 PHSESMLASCSYDMSVIVWD 263
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 87 SSSNRHLLAS-SGD-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGT 144
S N HL AS SGD L++WD D+ LN K+ + + + DWN+ K + T
Sbjct: 156 SPRNAHLFASVSGDRTLKIWDSRDNR-----SLNTIKAHDH--EILTCDWNKYNDKEVVT 208
Query: 145 CSIDTTCTIWDIEKGVVETQLI-AHDKEVYDI-CWGEAR-VFASVSADGSVRIFDLRDKE 201
S+D T IWDI T ++ H V I C + + AS S D SV ++D R +E
Sbjct: 209 GSVDKTIRIWDIRYPDRPTTILRGHTYAVRRIKCSPHSESMLASCSYDMSVIVWD-RARE 267
Query: 202 HSTIIYESPQPDTPLLRLAWN 222
II ++ L WN
Sbjct: 268 QDPIIARMDHHTEFVVGLDWN 288
>sp|Q1JQD2|GRWD1_BOVIN Glutamate-rich WD repeat-containing protein 1 OS=Bos taurus
GN=GRWD1 PE=2 SV=1
Length = 446
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 101/236 (42%), Gaps = 27/236 (11%)
Query: 109 SSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKG----VVETQ 164
+ ++P+ + F + DW+ P R+ T +W G V +
Sbjct: 202 TRMKPIFAFSGHMGEGF-----ALDWSPRVPGRLLTGDCQKNIHLWTPTDGGSWHVDQRP 256
Query: 165 LIAHDKEVYDICWG--EARVFASVSADGSVRIFDLRDK-EHSTIIYESPQPDTPLLRLAW 221
+ H + V D+ W E VFAS SAD S+RI+D+R + ++ + D + + W
Sbjct: 257 FVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVINW 316
Query: 222 NKQDLRYMATILMDSNKVVILDIR--SPTLPVAELERHRACVNAIAWAPQSRRHICSVGD 279
+ ++ ++ D + + D+R PVA ++H A V ++ W PQ + G
Sbjct: 317 SHREPFLLSG--GDDGALKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGA 374
Query: 280 DSQAFIWELPLP--PVAGPNGIDP---------MSMYSAGSEINQLQWSPAQPDWL 324
D+Q W+L + P AG DP + ++ +++ +L W P P L
Sbjct: 375 DNQITQWDLAVERDPEAGDAETDPGLADLPQQLLFVHQGETDLKELHWHPQCPGVL 430
>sp|Q9BQ67|GRWD1_HUMAN Glutamate-rich WD repeat-containing protein 1 OS=Homo sapiens
GN=GRWD1 PE=1 SV=1
Length = 446
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 22/214 (10%)
Query: 131 SFDWNEIEPKRIGTCSIDTTCTIWDIEKG----VVETQLIAHDKEVYDICWG--EARVFA 184
+ DW+ R+ T +W G V + + H + V D+ W E VFA
Sbjct: 219 ALDWSPRVTGRLLTGDCQKNIHLWTPTDGGSWHVDQRPFVGHTRSVEDLQWSPTENTVFA 278
Query: 185 SVSADGSVRIFDLRDK-EHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILD 243
S SAD S+RI+D+R + ++ + D + ++W++++ ++ D + I D
Sbjct: 279 SCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISWSRREPFLLSG--GDDGALKIWD 336
Query: 244 IR--SPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLP--PVAGPNGI 299
+R PVA ++H A V ++ W PQ + G D Q W+L + P AG
Sbjct: 337 LRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADHQITQWDLAVERDPEAGDVEA 396
Query: 300 DP---------MSMYSAGSEINQLQWSPAQPDWL 324
DP + ++ +E+ +L W P P L
Sbjct: 397 DPGLADLPQQLLFVHQGETELKELHWHPQCPGLL 430
>sp|Q2GVT8|SEC31_CHAGB Protein transport protein SEC31 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=SEC31 PE=3 SV=1
Length = 1258
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 88/193 (45%), Gaps = 14/193 (7%)
Query: 101 LRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGV 160
L+LWD AV+ S+ ++ P+ + +N + P+ + T +WD
Sbjct: 96 LQLWDAAKLLAGEEAVM--SRDTKHTGPIKALQFNPLRPQVLATAGSKGELFVWDTNDTS 153
Query: 161 VETQL---IAHDKEVYDICWGE--ARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTP 215
+L AHD + + W + + A+ SA G V ++DL+ K+ S + + +P
Sbjct: 154 TAFRLGTAAAHDIDC--VAWNRKVSNILATGSAGGFVTVWDLKTKKASLTLNNNRKP--- 208
Query: 216 LLRLAWNKQDLRYMATILMDSNKVVIL--DIRSPTLPVAELERHRACVNAIAWAPQSRRH 273
+ +AW+ + + T D N +IL ++R+ P L+ H + +++W Q
Sbjct: 209 VSAIAWDPTNSTNLLTATSDDNTPLILLWNLRNSQAPEKTLQGHDQGILSLSWCQQDPGL 268
Query: 274 ICSVGDDSQAFIW 286
+ S G D++ +W
Sbjct: 269 LISCGKDNRTLVW 281
>sp|Q54JS5|WDR24_DICDI WD repeat-containing protein 24 homolog OS=Dictyostelium discoideum
GN=wdr24 PE=3 SV=1
Length = 1023
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 86/183 (46%), Gaps = 15/183 (8%)
Query: 142 IGTCSIDTTCTIWD-IEKGV--VETQLIAHDKEVYDICWGEARV--FASVSADGSVRIFD 196
I T + + IW+ + +G VE H + V + W ++ + S D ++R++D
Sbjct: 86 IATAATNGAVVIWNTVREGSKSVERVFTDHSRAVNKLAWHPEKLDCILTGSQDNTLRMWD 145
Query: 197 LRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELER 256
+RD +++ I SP+ ++ + + +N A D+ + + DIR PT+ V ++
Sbjct: 146 IRDSANASKITFSPKSES-IRDVQFNPSQANQFAAAF-DNGTIQLWDIRKPTIAVEKITS 203
Query: 257 HRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQW 316
H+ V I W P+ + I S G D +W+ NG ++ S S +++++W
Sbjct: 204 HQGLVLTIDWHPEEKNIIASGGRDRAIRVWDF-------SNG-KSLNNVSTISSVSRIKW 255
Query: 317 SPA 319
P
Sbjct: 256 RPG 258
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 83/193 (43%), Gaps = 23/193 (11%)
Query: 93 LLASSGDFLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCT 152
L S + LR+WD+ DS+ + + S SE + +N + + + T
Sbjct: 133 LTGSQDNTLRMWDIRDSA--NASKITFSPKSE---SIRDVQFNPSQANQFAAAFDNGTIQ 187
Query: 153 IWDIEKGVVETQLI-AHDKEVYDICWG--EARVFASVSADGSVRIFDLRDKEH----STI 205
+WDI K + + I +H V I W E + AS D ++R++D + + STI
Sbjct: 188 LWDIRKPTIAVEKITSHQGLVLTIDWHPEEKNIIASGGRDRAIRVWDFSNGKSLNNVSTI 247
Query: 206 IYESPQPDTPLLRLAWNKQDLRYMATI--LMDSNKVVILDIRSPTLPVAELERHRACVNA 263
+ + R+ W + ++A+ ++D ++ I D++ P +P+ HR
Sbjct: 248 --------SSVSRIKWRPGNKWHIASCSSIVDF-QIHIWDVKKPYIPLFSFTDHRDVPTG 298
Query: 264 IAWAPQSRRHICS 276
+ W S CS
Sbjct: 299 LIWKSPSSLISCS 311
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 7/109 (6%)
Query: 224 QDLRYMATILMDSNKVVILD-IRSPTLPVAEL-ERHRACVNAIAWAPQSRRHICSVGDDS 281
++ R++ + VVI + +R + V + H VN +AW P+ I + D+
Sbjct: 80 ENYRFLIATAATNGAVVIWNTVREGSKSVERVFTDHSRAVNKLAWHPEKLDCILTGSQDN 139
Query: 282 QAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSN 330
+W++ A P S I +Q++P+Q + A AF N
Sbjct: 140 TLRMWDIRDSANASKITFSPKS-----ESIRDVQFNPSQANQFAAAFDN 183
>sp|O60508|PRP17_HUMAN Pre-mRNA-processing factor 17 OS=Homo sapiens GN=CDC40 PE=1 SV=1
Length = 579
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 67/151 (44%), Gaps = 9/151 (5%)
Query: 144 TCSIDTTCTIWDI--EKGVVETQLIAHDKEVYDICWGEARV-FASVSADGSVRIFDLRDK 200
+CS+D +W++ E+ + T I H K V DIC+ A F S + D R L D
Sbjct: 306 SCSMDCKIKLWEVYGERRCLRT-FIGHSKAVRDICFNTAGTQFLSAAYD---RYLKLWDT 361
Query: 201 EHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRAC 260
E I P +D + + M K+V DIRS + V E +RH
Sbjct: 362 ETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEI-VQEYDRHLGA 420
Query: 261 VNAIAWAPQSRRHICSVGDDSQAFIWELPLP 291
VN I + ++RR + S DD +WE +P
Sbjct: 421 VNTIVFVDENRRFV-STSDDKSLRVWEWDIP 450
>sp|Q6FXI8|HAT2_CANGA Histone acetyltransferase type B subunit 2 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=HAT2 PE=3 SV=1
Length = 419
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 134 WNEIEPKRIGTCSIDTTCTIWDI---EKGVVETQLI--AHDKEVYDICW--GEARVFASV 186
+N E + + S D+ +WDI EK + T AH + D+ W EA +F SV
Sbjct: 187 FNANEKYSLLSGSDDSNIALWDISNFEKNIKPTITFEDAHTDIINDVKWHSSEAHIFGSV 246
Query: 187 SADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRS 246
S D ++++FD R S+ I + P LA++ A D N V + DIR
Sbjct: 247 SEDSTMKLFDKR----SSQIIHNINTKKPYNTLAFSPFSSNLFAAAGTD-NLVYLYDIRD 301
Query: 247 PTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWEL 288
+ P+ + H V AI + P + + S G D + +W+L
Sbjct: 302 VSNPLYAMTGHEDAVTAIEFDPNNDGILYSSGSDRRTIVWDL 343
>sp|Q55CT5|SEC31_DICDI Protein transport protein SEC31 OS=Dictyostelium discoideum
GN=sec31 PE=3 SV=1
Length = 1355
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 73/171 (42%), Gaps = 10/171 (5%)
Query: 127 APLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDK-----EVYDICWGE-- 179
P+ S D+N P + + D+ IWD+ + L K ++ + W +
Sbjct: 130 GPVQSIDFNVQNPNLLASGGSDSEVFIWDLSDPTQPSALNPGSKSQQSSDITCVAWNKKV 189
Query: 180 ARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKV 239
A + S S +G + I+DL+ K+ I + + + W+ + + D +
Sbjct: 190 AHILGSASYNGYIVIWDLKSKKTLMTINDRNR-KCKYRSIVWHPSEATQIVAASEDDDHP 248
Query: 240 VIL--DIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWEL 288
VI D+R+ T PV +E H+ V ++W P + S G D++ F W
Sbjct: 249 VIQAWDLRNTTSPVKSMEGHKKGVWGLSWCPSDNALLLSTGKDNKTFCWNF 299
Score = 36.2 bits (82), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 255 ERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQL 314
+RH V +I + Q+ + S G DS+ FIW+L P P+ ++P S S+I +
Sbjct: 126 QRHSGPVQSIDFNVQNPNLLASGGSDSEVFIWDLSDP--TQPSALNPGSKSQQSSDITCV 183
Query: 315 QWS 317
W+
Sbjct: 184 AWN 186
>sp|Q9DC48|PRP17_MOUSE Pre-mRNA-processing factor 17 OS=Mus musculus GN=Cdc40 PE=1 SV=1
Length = 579
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 9/151 (5%)
Query: 144 TCSIDTTCTIWDI--EKGVVETQLIAHDKEVYDICWGEARV-FASVSADGSVRIFDLRDK 200
+CS+D +W++ ++ + T I H K V DIC+ A F S + D R L D
Sbjct: 306 SCSMDCKIKLWEVYGDRRCLRT-FIGHSKAVRDICFNTAGTQFLSAAYD---RYLKLWDT 361
Query: 201 EHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRAC 260
E I P +D + + M K+V DIRS + V E +RH
Sbjct: 362 ETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEI-VQEYDRHLGA 420
Query: 261 VNAIAWAPQSRRHICSVGDDSQAFIWELPLP 291
VN I + ++RR + S DD +WE +P
Sbjct: 421 VNTIVFVDENRRFV-STSDDKSLRVWEWDIP 450
>sp|Q1LV15|WDR69_DANRE Outer row dynein assembly protein 16 homolog OS=Danio rerio
GN=wdr69 PE=2 SV=2
Length = 415
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 89/223 (39%), Gaps = 57/223 (25%)
Query: 7 ESHLRSENSVTHESPYPLYAMAVCGQRIAVGSF-----------------IEDYTNRVDV 49
E H ++ +PY G ++A GSF +T +
Sbjct: 131 EGHRNVVYAIAFNNPY--------GDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVC 182
Query: 50 VSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHL-------LASSGDFLR 102
++F P+S + T S D T ++D S S+ H ++GD L
Sbjct: 183 LAFNPQSTLVATG---SMD----TTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLV 235
Query: 103 ---------LWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTI 153
LWDV S V VL+ + C F+W + I T S+D +C +
Sbjct: 236 TGSFDHTAILWDV--PSGRKVHVLSGHRGEISCVQ---FNW---DCSLIATASLDKSCKV 287
Query: 154 WDIEKGVVETQLIAHDKEVYDICWG-EARVFASVSADGSVRIF 195
WD E G L+ H+ EV D+C+ ++ A+ SADG+ R+F
Sbjct: 288 WDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVF 330
Score = 32.7 bits (73), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 67/163 (41%), Gaps = 8/163 (4%)
Query: 128 PLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGEARVFASVS 187
PLT+ +N+ I T S D TC IWD G L H VY I + +
Sbjct: 94 PLTNVAFNKSGSCFI-TGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNP--YGDKV 150
Query: 188 ADGSV-RIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRS 246
A GS + L E Y ++ LA+N Q +AT MD+ + D+ S
Sbjct: 151 ATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQS-TLVATGSMDTT-AKLWDVES 208
Query: 247 PTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELP 289
V+ L H A + ++ + R + + D A +W++P
Sbjct: 209 GE-EVSTLAGHFAEIISLCFNTTGDRLV-TGSFDHTAILWDVP 249
>sp|O14021|PRW1_SCHPO RbAp48-related WD40 repeat-containing protein prw1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prw1 PE=1 SV=1
Length = 431
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 11/171 (6%)
Query: 128 PLTSFDWNEIEPKRIGTCSIDTTCTIWDIEK-------GVVETQLIAHDKEVYDI--CWG 178
P TS WN + + + S D T + WD+ V++ + +H+K+V D+ +
Sbjct: 186 PCTSVCWNFLSKGTLVSGSQDATLSCWDLNAYNESDSASVLKVHISSHEKQVSDVRFHYK 245
Query: 179 EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDT-PLLRLAWNKQDLRYMATILMDSN 237
+ ASVS D + + D+R + ST S + P+ +A+N + +AT D
Sbjct: 246 HQDLLASVSYDQYLHVHDIRRPDASTKPARSVHAHSGPIHSVAFNPHNDFILATCSTDKT 305
Query: 238 KVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWEL 288
+ + D+R+ + LE H V I+++P + S D + +W+L
Sbjct: 306 -IALWDLRNLNQRLHTLEGHEDIVTKISFSPHEEPILASTSADRRTLVWDL 355
>sp|Q873A1|SEC31_NEUCR Protein transport protein sec31 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=sec31 PE=3 SV=1
Length = 1256
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 14/193 (7%)
Query: 101 LRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGV 160
L LWD A++ S++++ P+ + +N + P+ + T +WD+
Sbjct: 96 LDLWDAEKLIAGEDALI--SRTTKHTGPIKALQFNPLRPQVLATAGAKGELFVWDVNDTS 153
Query: 161 VETQL---IAHDKEVYDICWGE--ARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTP 215
+L AHD + + W A + A+ A G V ++DL+ K+ S + +
Sbjct: 154 APFRLGTAAAHDIDC--LAWNPKVANILATGGAGGFVTVWDLKTKKASLTLNNHRKA--- 208
Query: 216 LLRLAWNKQDLRYMATILMDSNKVVIL--DIRSPTLPVAELERHRACVNAIAWAPQSRRH 273
+ +AW+ ++ + T D VIL ++R+ P L+ H + +++W Q
Sbjct: 209 VSAIAWDPENSTKLLTASSDDTAPVILLWNLRNSQAPEKTLQGHDQGILSLSWCQQDAGL 268
Query: 274 ICSVGDDSQAFIW 286
+ S G D++ IW
Sbjct: 269 LLSCGKDNRTLIW 281
>sp|Q54DS4|Y2056_DICDI WD repeat-containing protein DDB_G0292056 OS=Dictyostelium
discoideum GN=DDB_G0292056 PE=4 SV=1
Length = 1823
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 12/165 (7%)
Query: 133 DWNEIEPKRIGTCSIDTTCTIWDIE--KGVVETQLIAHDKEVYDICWG--EARVFASVSA 188
DWN P + + S T IWDIE K + Q +H + + D+ W + + A+ SA
Sbjct: 147 DWNSQSPNLVASSSNQDTF-IWDIENPKYPLLGQFSSHQRAISDLSWSLFDNNILATTSA 205
Query: 189 DGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK--VVILDIRS 246
D V I+DLR + + +++ WN R+ + +L +++ ++I DIR
Sbjct: 206 DSFVNIWDLRTPKKAVKFKSLKSHILGAIQVKWN----RFNSNVLASAHESYLMIWDIRK 261
Query: 247 PTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLP 291
+ + H A V I W+ + + I + D IW P P
Sbjct: 262 DSQEL-NTAVHSAKVYGIDWSHRDEKEILTCSQDKTVKIWNYPSP 305
Score = 35.4 bits (80), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 90 NRHLLASSGD-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSID 148
N ++LAS+ + +L +WD+ S E LN + S A + DW+ + K I TCS D
Sbjct: 242 NSNVLASAHESYLMIWDIRKDSQE----LNTAVHS---AKVYGIDWSHRDEKEILTCSQD 294
Query: 149 TTCTIWD 155
T IW+
Sbjct: 295 KTVKIWN 301
>sp|Q0P593|WDR69_BOVIN Outer row dynein assembly protein 16 homolog OS=Bos taurus GN=WDR69
PE=2 SV=1
Length = 415
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 92/224 (41%), Gaps = 47/224 (20%)
Query: 7 ESHLRSENSVTHESPYPLYAMAVCGQRIAVGSF-----------------IEDYTNRVDV 49
E H ++ +PY G +IA GSF +T +
Sbjct: 131 EGHRNVVYAIAFNNPY--------GDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVC 182
Query: 50 VSFEPESL-----SIKTHPSL----SFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSGDF 100
+SF P+S S+ T L S + + T + S S +S NR + S
Sbjct: 183 LSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHT 242
Query: 101 LRLWDVGDSSIEPVAVLNNSKSSEFCAPLTS--FDWNEIEPKRIGTCSIDTTCTIWDIEK 158
+ +W+ D+ + ++ + CA ++S F+W + I T S+D TC +WD
Sbjct: 243 VTVWEA-DTGRKVYTLIGH------CAEISSAVFNW---DCSLILTGSMDKTCKLWDAVN 292
Query: 159 GVVETQLIAHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKE 201
G L HD E+ D C+ ++ A+ SADG+ RIF +E
Sbjct: 293 GKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRE 336
>sp|Q4I7L0|HAT2_GIBZE Histone acetyltransferase type B subunit 2 OS=Gibberella zeae
(strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084)
GN=HAT2 PE=3 SV=1
Length = 423
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 31/231 (13%)
Query: 131 SFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIA-------HDKEVYDICWG--EAR 181
+WN E + + S DTT +WD++ +++++ H + V D+ +
Sbjct: 181 GLNWNPHEEGCLASGSEDTTMRLWDLKTLKADSRILNPSRTYRHHTQIVNDVQYHPISKN 240
Query: 182 VFASVSADGSVRIFDLRDKE--HSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKV 239
SVS D +++I D+R E + ++ + D + LA+N +AT D +
Sbjct: 241 FIGSVSDDQTLQIVDIRHSETNKAAVVAKRGHLDA-INALAFNPNSEVLVATASADKT-I 298
Query: 240 VILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIW--------ELPLP 291
I D+R+ V LE H V ++AW P + S D + W +LP
Sbjct: 299 GIWDLRNVKEKVHTLEGHNDAVTSLAWHPTEAGILGSASYDRRIIFWDLSRVGEEQLPDD 358
Query: 292 PVAGPNGIDPMSMYSAGSEINQL---QWSPAQPDWL--AIAFSNKMQLLKV 337
GP P ++ G N L W+P +P WL + A N +Q+ KV
Sbjct: 359 QDDGP----PELLFMHGGHTNHLADFSWNPNEP-WLVASAAEDNLLQIWKV 404
>sp|O13637|SEC31_SCHPO Protein transport protein sec31 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=sec31 PE=1 SV=1
Length = 1224
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 104/244 (42%), Gaps = 26/244 (10%)
Query: 103 LWDVGDSSIEPVAVLNNSKSSEFCAPLTS--------FDWNEIEPKRIGTCSIDTTCTIW 154
L D G +P A+L + ++S A S D+N ++P + + +W
Sbjct: 86 LEDGGIGFWDPAAILKSDEASASIATYKSENGSILGPLDFNRLQPNLLASGDNKGDVWVW 145
Query: 155 DIEKGVVETQLIAHDK--EVYDICWGE--ARVFASVSADGSVRIFDLRDKEH----STII 206
DI+ L ++ EV+ + W + + AS +A ++D++ K S +
Sbjct: 146 DIKHPQQPFALPKQNRSSEVHVVSWNNKVSHILASGNATEYTTVWDVKLKRQVLNLSYLG 205
Query: 207 YESPQPDTPLLR-LAWNKQDLRYMATILMDSNKVVIL--DIRSPTLPVAELERHRACVNA 263
T + +AW+ + +AT + D+ +IL D+R PT+P L H+ +
Sbjct: 206 AAGVSAATGAVNSIAWHPNNATRLATAIDDNRNPIILTWDLRQPTVPQNILTGHQKAALS 265
Query: 264 IAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDW 323
++W P+ + S G D +A +W + G S +G+ + W P+ +
Sbjct: 266 LSWCPEDPTFLLSSGKDGRAMVWNV-------ETGESLGSFPRSGNWYTKSSWCPSNSNR 318
Query: 324 LAIA 327
+A+A
Sbjct: 319 VAVA 322
>sp|P39984|HAT2_YEAST Histone acetyltransferase type B subunit 2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=HAT2 PE=1
SV=1
Length = 401
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 141 RIGTCSIDTTCTIWDIEKGVVETQLI-----AHDKEVYDICWGEAR--VFASVSADGSVR 193
R+ + S D T +W++ G T+ + H + D W +F +VS D ++
Sbjct: 175 RLLSGSDDHTVALWEVGSGGDPTKPVRTWNDLHSDIINDNKWHNFNKDLFGTVSEDSLLK 234
Query: 194 IFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAE 253
I D+R + + PQP LA++ +A MDS V + D+R+ P+
Sbjct: 235 INDVRANNTTIDTVKCPQP---FNTLAFSHHSSNLLAAAGMDS-YVYLYDLRNMKEPLHH 290
Query: 254 LERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELP-----LPPVAGPNGIDPMSMYSAG 308
+ H VN + ++ + S G D++ +W+L P +G+ + M AG
Sbjct: 291 MSGHEDAVNNLEFSTHVDGVVVSSGSDNRLMMWDLKQIGAEQTPDDAEDGVPELIMVHAG 350
Query: 309 --SEINQLQWSPAQPDWLAIAFSNKMQLLKV 337
S +N +P P WL +A + + +L+V
Sbjct: 351 HRSSVNDFDLNPQIP-WL-VASAEEENILQV 379
>sp|Q54ED4|GRWD1_DICDI Glutamate-rich WD repeat-containing protein 1 OS=Dictyostelium
discoideum GN=grwd1 PE=3 SV=1
Length = 482
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 131 SFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIA---HDKEVYDICWG--EARVFAS 185
+ DW+ R+ T + + + + + +T A H + V DI W E +VFAS
Sbjct: 255 ALDWSPKIAGRLATGDCNNSIFVTNASESTWKTDTQAFKGHTESVEDIQWSPSEEKVFAS 314
Query: 186 VSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIR 245
S D +VRI+D+R K I ++ D ++ +W++ ++ Y+ D + D+R
Sbjct: 315 CSIDQTVRIWDIR-KPKPAITVKAHTADVNVI--SWSR-NVEYLLVSGCDDGSFRVWDLR 370
Query: 246 S--PTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPL 290
+ PV++ + H + +I W P + D Q IW+ L
Sbjct: 371 AFKDNSPVSDFKYHTGPITSIEWNPYEESQVIVSSSDDQVTIWDFSL 417
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 12/71 (16%)
Query: 91 RHLLASSGD--FLRLWDVGDSSIEPVAVLNNSKSSEF---CAPLTSFDWNEIEPKRIGTC 145
+LL S D R+WD+ A +NS S+F P+TS +WN E ++
Sbjct: 352 EYLLVSGCDDGSFRVWDLR-------AFKDNSPVSDFKYHTGPITSIEWNPYEESQVIVS 404
Query: 146 SIDTTCTIWDI 156
S D TIWD
Sbjct: 405 SSDDQVTIWDF 415
>sp|Q5RBW3|CORO7_PONAB Coronin-7 OS=Pongo abelii GN=CORO7 PE=2 SV=1
Length = 925
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Query: 92 HLLASSGD--FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDT 149
H LA +G+ +RLW V +E V + + + + S ++ + + + S D
Sbjct: 558 HRLAVAGEDARIRLWRVPAEGLEEVLTVPETVLTGHMEKICSLRFHPLAADVLASSSYDL 617
Query: 150 TCTIWDIEKGVVETQLIAHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYE 208
T IWD++ GV +L H +++ + W + + A+V DG VR++ R + + E
Sbjct: 618 TVRIWDLQAGVDRLKLQGHQDQIFSLAWSPDGQQLATVCKDGRVRVY--RPRSGPEPLQE 675
Query: 209 SPQP 212
P P
Sbjct: 676 GPGP 679
Score = 36.2 bits (82), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 70/167 (41%), Gaps = 16/167 (9%)
Query: 127 APLTSFDWNEIEPKRIGTCSIDTTCTIWDIEK-------GVVETQLIAHDKEVYDICWG- 178
A +T W+ +P R+ D +W + V ET L H +++ + +
Sbjct: 545 AAVTDLAWDPFDPHRLAVAGEDARIRLWRVPAEGLEEVLTVPETVLTGHMEKICSLRFHP 604
Query: 179 -EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSN 237
A V AS S D +VRI+DL+ + + LAW+ D + +AT+ D
Sbjct: 605 LAADVLASSSYDLTVRIWDLQAGVDRLKLQGH---QDQIFSLAWSP-DGQQLATVCKD-G 659
Query: 238 KVVILDIRSPTLPVAELERHRACVNA-IAWAPQSRRHICSVGDDSQA 283
+V + RS P+ E + A I W R + S G DSQ+
Sbjct: 660 RVRVYRPRSGPEPLQEGPGPKGGRGARIVWVCDGRCLLVS-GFDSQS 705
Score = 35.4 bits (80), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 149 TTCTIWDIEKGVVETQLIAHDKEVYDICWG-EARVFASVSADGSVRIFDLRDK---EHST 204
TT +WD K T+L AH V W + + + D +RIFD R K ST
Sbjct: 148 TTVKVWDAAKQQPLTELEAHGDLVQSAVWSRDGALVGTACKDKQLRIFDPRTKPQASQST 207
Query: 205 IIYESPQPDTPLLRLAWNKQDLRYMATIL--MDSNKVVILDIR 245
+E+ + RLAW +++T M ++V + D R
Sbjct: 208 QAHENSRDS----RLAWTGTWEHFVSTGFNQMREHEVKLWDTR 246
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 226 LRYMATILMDSNKVVILDIRSPT-LPVAELE--RHRACVNAIAWAPQSRRHICSVGDDSQ 282
LR +L +V +L++R P LP L ++ A V +AW P + G+D++
Sbjct: 509 LRVAVPLLSSGGQVAVLELRKPGRLPDTALPTLQNGAAVTDLAWDPFDPHRLAVAGEDAR 568
Query: 283 AFIWELP 289
+W +P
Sbjct: 569 IRLWRVP 575
>sp|Q60972|RBBP4_MOUSE Histone-binding protein RBBP4 OS=Mus musculus GN=Rbbp4 PE=1 SV=5
Length = 425
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 20/222 (9%)
Query: 134 WNEIEPKRIGTCSIDTTCTIWDI-----EKGVVETQLI--AHDKEVYDICWG--EARVFA 184
WN + + S D T +WDI E VV+ + I H V D+ W +F
Sbjct: 185 WNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFG 244
Query: 185 SVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDI 244
SV+ D + I+D R S + + L++N +AT D V + D+
Sbjct: 245 SVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT-VALWDL 303
Query: 245 RSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWEL-----PLPPVAGPNGI 299
R+ L + E H+ + + W+P + + S G D + +W+L P +G
Sbjct: 304 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGP 363
Query: 300 DPMSMYSAG--SEINQLQWSPAQPDWL--AIAFSNKMQLLKV 337
+ G ++I+ W+P +P W+ +++ N MQ+ ++
Sbjct: 364 PELLFIHGGHTAKISDFSWNPNEP-WVICSVSEDNIMQVWQM 404
>sp|Q09028|RBBP4_HUMAN Histone-binding protein RBBP4 OS=Homo sapiens GN=RBBP4 PE=1 SV=3
Length = 425
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 20/222 (9%)
Query: 134 WNEIEPKRIGTCSIDTTCTIWDI-----EKGVVETQLI--AHDKEVYDICWG--EARVFA 184
WN + + S D T +WDI E VV+ + I H V D+ W +F
Sbjct: 185 WNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFG 244
Query: 185 SVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDI 244
SV+ D + I+D R S + + L++N +AT D V + D+
Sbjct: 245 SVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT-VALWDL 303
Query: 245 RSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWEL-----PLPPVAGPNGI 299
R+ L + E H+ + + W+P + + S G D + +W+L P +G
Sbjct: 304 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGP 363
Query: 300 DPMSMYSAG--SEINQLQWSPAQPDWL--AIAFSNKMQLLKV 337
+ G ++I+ W+P +P W+ +++ N MQ+ ++
Sbjct: 364 PELLFIHGGHTAKISDFSWNPNEP-WVICSVSEDNIMQVWQM 404
>sp|Q3MHL3|RBBP4_BOVIN Histone-binding protein RBBP4 OS=Bos taurus GN=RBBP4 PE=1 SV=3
Length = 425
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 20/222 (9%)
Query: 134 WNEIEPKRIGTCSIDTTCTIWDI-----EKGVVETQLI--AHDKEVYDICWG--EARVFA 184
WN + + S D T +WDI E VV+ + I H V D+ W +F
Sbjct: 185 WNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFG 244
Query: 185 SVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDI 244
SV+ D + I+D R S + + L++N +AT D V + D+
Sbjct: 245 SVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT-VALWDL 303
Query: 245 RSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWEL-----PLPPVAGPNGI 299
R+ L + E H+ + + W+P + + S G D + +W+L P +G
Sbjct: 304 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGP 363
Query: 300 DPMSMYSAG--SEINQLQWSPAQPDWL--AIAFSNKMQLLKV 337
+ G ++I+ W+P +P W+ +++ N MQ+ ++
Sbjct: 364 PELLFIHGGHTAKISDFSWNPNEP-WVICSVSEDNIMQVWQM 404
>sp|Q5RF92|RBBP4_PONAB Histone-binding protein RBBP4 OS=Pongo abelii GN=RBBP4 PE=2 SV=3
Length = 425
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 20/222 (9%)
Query: 134 WNEIEPKRIGTCSIDTTCTIWDI-----EKGVVETQLI--AHDKEVYDICWG--EARVFA 184
WN + + S D T +WDI E VV+ + I H V D+ W +F
Sbjct: 185 WNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFG 244
Query: 185 SVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDI 244
SV+ D + I+D R S + + L++N +AT D V + D+
Sbjct: 245 SVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT-VALWDL 303
Query: 245 RSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWEL-----PLPPVAGPNGI 299
R+ L + E H+ + + W+P + + S G D + +W+L P +G
Sbjct: 304 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGP 363
Query: 300 DPMSMYSAG--SEINQLQWSPAQPDWL--AIAFSNKMQLLKV 337
+ G ++I+ W+P +P W+ +++ N MQ+ ++
Sbjct: 364 PELLFIHGGHTAKISDFSWNPNEP-WVICSVSEDNIMQVWQM 404
>sp|Q9W7I5|RBBP4_CHICK Histone-binding protein RBBP4 OS=Gallus gallus GN=RBBP4 PE=1 SV=3
Length = 425
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 20/222 (9%)
Query: 134 WNEIEPKRIGTCSIDTTCTIWDI-----EKGVVETQLI--AHDKEVYDICWG--EARVFA 184
WN + + S D T +WDI E VV+ + I H V D+ W +F
Sbjct: 185 WNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFG 244
Query: 185 SVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDI 244
SV+ D + I+D R S + + L++N +AT D V + D+
Sbjct: 245 SVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT-VALWDL 303
Query: 245 RSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWEL-----PLPPVAGPNGI 299
R+ L + E H+ + + W+P + + S G D + +W+L P +G
Sbjct: 304 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGP 363
Query: 300 DPMSMYSAG--SEINQLQWSPAQPDWL--AIAFSNKMQLLKV 337
+ G ++I+ W+P +P W+ +++ N MQ+ ++
Sbjct: 364 PELLFIHGGHTAKISDFSWNPNEP-WVICSVSEDNIMQVWQM 404
>sp|Q6INH0|RBP4B_XENLA Histone-binding protein RBBP4-B OS=Xenopus laevis GN=rbbp4-b PE=1
SV=3
Length = 425
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 134 WNEIEPKRIGTCSIDTTCTIWDI-----EKGVVETQLI--AHDKEVYDICWG--EARVFA 184
WN + + S D T +WDI E VV+ + I H V D+ W +F
Sbjct: 185 WNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFG 244
Query: 185 SVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDI 244
SV+ D + I+D R S + + L++N +AT D V + D+
Sbjct: 245 SVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT-VALWDL 303
Query: 245 RSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWEL-----PLPPVAGPNGI 299
R+ L + E H+ + + W+P + + S G D + +W+L P +G
Sbjct: 304 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGP 363
Query: 300 DPMSMYSAG--SEINQLQWSPAQPDWLAIAFS--NKMQLLKV 337
+ G ++I+ W+P +P W+ + S N MQ+ ++
Sbjct: 364 PELLFIHGGHTAKISDFSWNPNEP-WVICSVSEDNIMQVWQM 404
>sp|Q5M7K4|RBBP4_XENTR Histone-binding protein RBBP4 OS=Xenopus tropicalis GN=rbbp4 PE=2
SV=3
Length = 425
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 20/222 (9%)
Query: 134 WNEIEPKRIGTCSIDTTCTIWDI-----EKGVVETQLI--AHDKEVYDICWG--EARVFA 184
WN + + S D T +WDI E VV+ + I H V D+ W +F
Sbjct: 185 WNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFG 244
Query: 185 SVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDI 244
SV+ D + I+D R S + + L++N +AT D V + D+
Sbjct: 245 SVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT-VALWDL 303
Query: 245 RSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWEL-----PLPPVAGPNGI 299
R+ L + E H+ + + W+P + + S G D + +W+L P +G
Sbjct: 304 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGP 363
Query: 300 DPMSMYSAG--SEINQLQWSPAQPDWL--AIAFSNKMQLLKV 337
+ G ++I+ W+P +P W+ +++ N MQ+ ++
Sbjct: 364 PELLFIHGGHTAKISDFSWNPNEP-WVICSVSEDNIMQVWQM 404
>sp|O93377|RBP4A_XENLA Histone-binding protein RBBP4-A OS=Xenopus laevis GN=rbbp4-a PE=1
SV=3
Length = 425
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 20/222 (9%)
Query: 134 WNEIEPKRIGTCSIDTTCTIWDI-----EKGVVETQLI--AHDKEVYDICWG--EARVFA 184
WN + + S D T +WDI E VV+ + I H V D+ W +F
Sbjct: 185 WNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFG 244
Query: 185 SVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDI 244
SV+ D + I+D R S + + L++N +AT D V + D+
Sbjct: 245 SVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT-VALWDL 303
Query: 245 RSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWEL-----PLPPVAGPNGI 299
R+ L + E H+ + + W+P + + S G D + +W+L P +G
Sbjct: 304 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGP 363
Query: 300 DPMSMYSAG--SEINQLQWSPAQPDWL--AIAFSNKMQLLKV 337
+ G ++I+ W+P +P W+ +++ N MQ+ ++
Sbjct: 364 PELLFIHGGHTAKISDFSWNPNEP-WVICSVSEDNIMQVWQM 404
>sp|Q9I8G9|RBBP7_CHICK Histone-binding protein RBBP7 OS=Gallus gallus GN=RBBP7 PE=1 SV=1
Length = 424
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 20/225 (8%)
Query: 131 SFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLI-------AHDKEVYDICWG--EAR 181
WN + + S D T +WDI G E +++ H V D+ W
Sbjct: 180 GLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 239
Query: 182 VFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVI 241
+F SV+ D + I+D R S + + L++N +AT D V +
Sbjct: 240 LFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT-VAL 298
Query: 242 LDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPL--PPVAGPNGI 299
D+R+ L + E H+ + + W+P + + S G D + +W+L + +
Sbjct: 299 WDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE 358
Query: 300 D--PMSMYSAG---SEINQLQWSPAQPDWL--AIAFSNKMQLLKV 337
D P ++ G ++I+ W+P +P W+ +++ N MQ+ ++
Sbjct: 359 DGPPELLFIHGGHTAKISDFSWNPNEP-WVICSVSEDNIMQIWQM 402
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 93/224 (41%), Gaps = 22/224 (9%)
Query: 84 SRKSSSNRHLLASSGDF-LRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRI 142
S S+ HLL++S D + LWD+ E V + + A + W+ +
Sbjct: 182 SWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLF 241
Query: 143 GTCSIDTTCTIWDIEKGVVET---QLIAHDKEVYDICWGEARVF--ASVSADGSVRIFDL 197
G+ + D IWD + AH EV + + F A+ SAD +V ++DL
Sbjct: 242 GSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 301
Query: 198 RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIR------------ 245
R+ + +ES + + + ++ W+ + +A+ D ++ + D+
Sbjct: 302 RNLKLKLHSFESHKDE--IFQVHWSPHNETILASSGTD-RRLNVWDLSKIGEEQSAEDAE 358
Query: 246 -SPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWEL 288
P + H A ++ +W P ICSV +D+ IW++
Sbjct: 359 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 402
>sp|Q6P315|RBBP7_XENTR Histone-binding protein RBBP7 OS=Xenopus tropicalis GN=rbbp7 PE=2
SV=1
Length = 425
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 95/222 (42%), Gaps = 20/222 (9%)
Query: 134 WNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLI-------AHDKEVYDICWG--EARVFA 184
WN + + S D T +WDI G E +++ H V D+ W +F
Sbjct: 184 WNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSAVVEDVAWHLLHESLFG 243
Query: 185 SVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDI 244
SV+ D + I+D R S + + L++N +AT D V + D+
Sbjct: 244 SVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT-VALWDL 302
Query: 245 RSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPL--PPVAGPNGID-- 300
R+ L + E H+ + + W+P + + S G D + +W+L + + D
Sbjct: 303 RNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGP 362
Query: 301 PMSMYSAG---SEINQLQWSPAQPDWLAIAFS--NKMQLLKV 337
P ++ G ++I+ W+P +P W+ + S N MQ+ ++
Sbjct: 363 PELLFIHGGHTAKISDFSWNPNEP-WVICSVSEDNIMQIWQM 403
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 94/224 (41%), Gaps = 22/224 (9%)
Query: 84 SRKSSSNRHLLASSGDF-LRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRI 142
S S+ + HLL++S D + LWD+ E V + + A + W+ +
Sbjct: 183 SWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSAVVEDVAWHLLHESLF 242
Query: 143 GTCSIDTTCTIWDIEKGVVET---QLIAHDKEVYDICWGEARVF--ASVSADGSVRIFDL 197
G+ + D IWD + AH EV + + F A+ SAD +V ++DL
Sbjct: 243 GSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 302
Query: 198 RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIR------------ 245
R+ + +ES + + + ++ W+ + +A+ D ++ + D+
Sbjct: 303 RNLKLKLHSFESHKDE--IFQVHWSPHNETILASSGTD-RRLNVWDLSKIGEEQSAEDAE 359
Query: 246 -SPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWEL 288
P + H A ++ +W P ICSV +D+ IW++
Sbjct: 360 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
>sp|Q8AVH1|RBBP7_XENLA Histone-binding protein RBBP7 OS=Xenopus laevis GN=rbbp7 PE=2 SV=1
Length = 425
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 95/222 (42%), Gaps = 20/222 (9%)
Query: 134 WNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLI-------AHDKEVYDICWG--EARVFA 184
WN + + S D T +WDI G E +++ H V D+ W +F
Sbjct: 184 WNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSAVVEDVAWHLLHESLFG 243
Query: 185 SVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDI 244
SV+ D + I+D R S + + L++N +AT D V + D+
Sbjct: 244 SVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT-VALWDL 302
Query: 245 RSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPL--PPVAGPNGID-- 300
R+ L + E H+ + + W+P + + S G D + +W+L + + D
Sbjct: 303 RNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGP 362
Query: 301 PMSMYSAG---SEINQLQWSPAQPDWLAIAFS--NKMQLLKV 337
P ++ G ++I+ W+P +P W+ + S N MQ+ ++
Sbjct: 363 PELLFIHGGHTAKISDFSWNPNEP-WVICSVSEDNIMQIWQM 403
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 94/224 (41%), Gaps = 22/224 (9%)
Query: 84 SRKSSSNRHLLASSGDF-LRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRI 142
S S+ + HLL++S D + LWD+ E V + + A + W+ +
Sbjct: 183 SWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSAVVEDVAWHLLHESLF 242
Query: 143 GTCSIDTTCTIWDIEKGVVET---QLIAHDKEVYDICWGEARVF--ASVSADGSVRIFDL 197
G+ + D IWD + AH EV + + F A+ SAD +V ++DL
Sbjct: 243 GSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 302
Query: 198 RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIR------------ 245
R+ + +ES + + + ++ W+ + +A+ D ++ + D+
Sbjct: 303 RNLKLKLHSFESHKDE--IFQVHWSPHNETILASSGTD-RRLNVWDLSKIGEEQSAEDAE 359
Query: 246 -SPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWEL 288
P + H A ++ +W P ICSV +D+ IW++
Sbjct: 360 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
>sp|Q04225|RRB1_YEAST Ribosome assembly protein RRB1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RRB1 PE=1 SV=1
Length = 511
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 84/189 (44%), Gaps = 20/189 (10%)
Query: 143 GTCSIDTTCTIWDIEKGVVETQ--LIAHDKEVYDICWG--EARVFASVSADGSVRIFDLR 198
G CS T + V + Q ++++K + DI W E+ VFA+ DG +RI+D R
Sbjct: 293 GDCSGQIYFTQRHTSRWVTDKQPFTVSNNKSIEDIQWSRTESTVFATAGCDGYIRIWDTR 352
Query: 199 DKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPT-------LPV 251
K+H I +T + ++W+ + + Y+ D+ + D+R T PV
Sbjct: 353 SKKHKPAI-SVKASNTDVNVISWSDK-IGYLLASGDDNGTWGVWDLRQFTPSNADAVQPV 410
Query: 252 AELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEI 311
A+ + H+ + +IA+ P + +D+ +W+L + D + +E
Sbjct: 411 AQYDFHKGAITSIAFNPLDESIVAVGSEDNTVTLWDLSVEA-------DDEEIKQQAAET 463
Query: 312 NQLQWSPAQ 320
+LQ P Q
Sbjct: 464 KELQEIPPQ 472
>sp|O22469|MSI3_ARATH WD-40 repeat-containing protein MSI3 OS=Arabidopsis thaliana
GN=MSI3 PE=1 SV=2
Length = 424
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 96/229 (41%), Gaps = 36/229 (15%)
Query: 134 WNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLI------AHDKEVYDICW--GEARVFAS 185
W+ + + + S D +WD+ + L H + D+ W +F S
Sbjct: 177 WSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGS 236
Query: 186 VSADGSVRIFDLRDKE--HSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILD 243
D + I+DLR + H ++E + L++N + +AT DS V + D
Sbjct: 237 AGDDCQLVIWDLRTNQMQHQVKVHERE-----INYLSFNPFNEWVLATASSDST-VALFD 290
Query: 244 IRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIW----------ELPLPPV 293
+R T P+ L +H V + W P + S G+D + +W E+ L
Sbjct: 291 LRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAE 350
Query: 294 AGPNGIDPMSMYSAG---SEINQLQWSPAQPDWL--AIAFSNKMQLLKV 337
GP P ++S G ++I+ W+ +P W+ ++A N +Q+ ++
Sbjct: 351 DGP----PELLFSHGGHKAKISDFAWNKDEP-WVISSVAEDNSLQVWQM 394
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 91/219 (41%), Gaps = 30/219 (13%)
Query: 92 HLLASSGD-FLRLWDVG----DSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCS 146
+LL+ S D + LWDV D + P+ V +S + W+ G+
Sbjct: 184 YLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSI-----IEDVAWHMKNENIFGSAG 238
Query: 147 IDTTCTIWDIEKGVVETQLIAHDKEVYDICWG--EARVFASVSADGSVRIFDLRD----- 199
D IWD+ ++ Q+ H++E+ + + V A+ S+D +V +FDLR
Sbjct: 239 DDCQLVIWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPL 298
Query: 200 ---KEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKV------VILDIR-SPTL 249
+H +++ LA + +D R M + D N+V + LD P
Sbjct: 299 HVLSKHEGEVFQVEWDPNHETVLASSGEDRRLM---VWDINRVGDEQLEIELDAEDGPPE 355
Query: 250 PVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWEL 288
+ H+A ++ AW I SV +D+ +W++
Sbjct: 356 LLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQM 394
>sp|P0CS36|HAT2_CRYNJ Histone acetyltransferase type B subunit 2 OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=HAT2 PE=3 SV=1
Length = 435
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 19/220 (8%)
Query: 134 WNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLI-------AHDKEVYDICW--GEARVFA 184
WN ++ I + S DTT WDI+ + + H V D+ W +F
Sbjct: 198 WNALKEGHILSASEDTTIGHWDIQGYSKQDPSLQPLRLYTGHSAYVADVEWHPKNENMFG 257
Query: 185 SVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDI 244
SVS DG + I+D R + + + + +++ Y+ N + + D+
Sbjct: 258 SVSDDGQIMIWDTRSDNTAKASSQVQGHNAEINCISFAPSS-EYLFLTGSSDNTIALWDL 316
Query: 245 RSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPL-----PPVAGPNGI 299
R + E H V ++W+P S H S D + IW+L P +G
Sbjct: 317 RKLSTKHHSFEAHTNDVLQLSWSPTSPVHFASASADRRVHIWDLDAIGAEQTPDDAEDGP 376
Query: 300 DPMSMYSAG--SEINQLQWSPAQPDWLAIAFSNKMQLLKV 337
+ G S++ + WSP+ P W IA +++ +L+V
Sbjct: 377 PELLFVHGGHTSKVCDISWSPSSP-W-TIASASEDNILQV 414
Score = 39.3 bits (90), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 96/224 (42%), Gaps = 40/224 (17%)
Query: 92 HLLASSGDF-LRLWDVG-----DSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTC 145
H+L++S D + WD+ D S++P+ + A + +W+ G+
Sbjct: 205 HILSASEDTTIGHWDIQGYSKQDPSLQPLRLYTG-----HSAYVADVEWHPKNENMFGSV 259
Query: 146 SIDTTCTIWDIEK---GVVETQLIAHDKEVYDICWGEAR--VFASVSADGSVRIFDLRD- 199
S D IWD +Q+ H+ E+ I + + +F + S+D ++ ++DLR
Sbjct: 260 SDDGQIMIWDTRSDNTAKASSQVQGHNAEINCISFAPSSEYLFLTGSSDNTIALWDLRKL 319
Query: 200 --KEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRS----------- 246
K HS +E+ D +L+L+W+ + A+ D +V I D+ +
Sbjct: 320 STKHHS---FEAHTND--VLQLSWSPTSPVHFASASAD-RRVHIWDLDAIGAEQTPDDAE 373
Query: 247 ---PTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWE 287
P L H + V I+W+P S I S +D+ +WE
Sbjct: 374 DGPPELLFVH-GGHTSKVCDISWSPSSPWTIASASEDNILQVWE 416
>sp|P0CS37|HAT2_CRYNB Histone acetyltransferase type B subunit 2 OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=HAT2 PE=3 SV=1
Length = 435
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 19/220 (8%)
Query: 134 WNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLI-------AHDKEVYDICW--GEARVFA 184
WN ++ I + S DTT WDI+ + + H V D+ W +F
Sbjct: 198 WNALKEGHILSASEDTTIGHWDIQGYSKQDPSLQPLRLYTGHSAYVADVEWHPKNENMFG 257
Query: 185 SVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDI 244
SVS DG + I+D R + + + + +++ Y+ N + + D+
Sbjct: 258 SVSDDGQIMIWDTRSDNTAKASSQVQGHNAEINCISFAPSS-EYLFLTGSSDNTIALWDL 316
Query: 245 RSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPL-----PPVAGPNGI 299
R + E H V ++W+P S H S D + IW+L P +G
Sbjct: 317 RKLSTKHHSFEAHTNDVLQLSWSPTSPVHFASASADRRVHIWDLDAIGAEQTPDDAEDGP 376
Query: 300 DPMSMYSAG--SEINQLQWSPAQPDWLAIAFSNKMQLLKV 337
+ G S++ + WSP+ P W IA +++ +L+V
Sbjct: 377 PELLFVHGGHTSKVCDISWSPSSP-W-TIASASEDNILQV 414
Score = 39.3 bits (90), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 96/224 (42%), Gaps = 40/224 (17%)
Query: 92 HLLASSGDF-LRLWDVG-----DSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTC 145
H+L++S D + WD+ D S++P+ + A + +W+ G+
Sbjct: 205 HILSASEDTTIGHWDIQGYSKQDPSLQPLRLYTG-----HSAYVADVEWHPKNENMFGSV 259
Query: 146 SIDTTCTIWDIEK---GVVETQLIAHDKEVYDICWGEAR--VFASVSADGSVRIFDLRD- 199
S D IWD +Q+ H+ E+ I + + +F + S+D ++ ++DLR
Sbjct: 260 SDDGQIMIWDTRSDNTAKASSQVQGHNAEINCISFAPSSEYLFLTGSSDNTIALWDLRKL 319
Query: 200 --KEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRS----------- 246
K HS +E+ D +L+L+W+ + A+ D +V I D+ +
Sbjct: 320 STKHHS---FEAHTND--VLQLSWSPTSPVHFASASAD-RRVHIWDLDAIGAEQTPDDAE 373
Query: 247 ---PTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWE 287
P L H + V I+W+P S I S +D+ +WE
Sbjct: 374 DGPPELLFVH-GGHTSKVCDISWSPSSPWTIASASEDNILQVWE 416
>sp|Q71UF4|RBBP7_RAT Histone-binding protein RBBP7 OS=Rattus norvegicus GN=Rbbp7 PE=2
SV=1
Length = 425
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 95/222 (42%), Gaps = 20/222 (9%)
Query: 134 WNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLI-------AHDKEVYDICWG--EARVFA 184
WN + + S D T +WDI G E +++ H V D+ W +F
Sbjct: 184 WNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFG 243
Query: 185 SVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDI 244
SV+ D + I+D R S + + L++N +AT D V + D+
Sbjct: 244 SVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKT-VALWDL 302
Query: 245 RSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPL--PPVAGPNGID-- 300
R+ L + E H+ + + W+P + + S G D + +W+L + + D
Sbjct: 303 RNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGP 362
Query: 301 PMSMYSAG---SEINQLQWSPAQPDWLAIAFS--NKMQLLKV 337
P ++ G ++I+ W+P +P W+ + S N MQ+ ++
Sbjct: 363 PELLFIHGGHTAKISDFSWNPNEP-WVICSVSEDNIMQIWQM 403
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 96/224 (42%), Gaps = 22/224 (9%)
Query: 84 SRKSSSNRHLLASSGDF-LRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRI 142
S S+ + HLL++S D + LWD+ E V + + A + W+ +
Sbjct: 183 SWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLF 242
Query: 143 GTCSIDTTCTIWDIEKGVVE--TQLI-AHDKEVYDICWGEARVF--ASVSADGSVRIFDL 197
G+ + D IWD + L+ AH EV + + F A+ SAD +V ++DL
Sbjct: 243 GSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 302
Query: 198 RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIR------------ 245
R+ + +ES + + + ++ W+ + +A+ D ++ + D+
Sbjct: 303 RNLKLKLHTFESHKDE--IFQVHWSPHNETILASSGTD-RRLNVWDLSKIGEEQSAEDAE 359
Query: 246 -SPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWEL 288
P + H A ++ +W P ICSV +D+ IW++
Sbjct: 360 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
>sp|Q4R304|RBBP7_MACFA Histone-binding protein RBBP7 OS=Macaca fascicularis GN=RBBP7 PE=2
SV=1
Length = 425
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 95/222 (42%), Gaps = 20/222 (9%)
Query: 134 WNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLI-------AHDKEVYDICWG--EARVFA 184
WN + + S D T +WDI G E +++ H V D+ W +F
Sbjct: 184 WNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFG 243
Query: 185 SVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDI 244
SV+ D + I+D R S + + L++N +AT D V + D+
Sbjct: 244 SVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKT-VALWDL 302
Query: 245 RSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPL--PPVAGPNGID-- 300
R+ L + E H+ + + W+P + + S G D + +W+L + + D
Sbjct: 303 RNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGP 362
Query: 301 PMSMYSAG---SEINQLQWSPAQPDWLAIAFS--NKMQLLKV 337
P ++ G ++I+ W+P +P W+ + S N MQ+ ++
Sbjct: 363 PELLFIHGGHTAKISDFSWNPNEP-WVICSVSEDNIMQIWQM 403
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 96/224 (42%), Gaps = 22/224 (9%)
Query: 84 SRKSSSNRHLLASSGDF-LRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRI 142
S S+ + HLL++S D + LWD+ E V + + A + W+ +
Sbjct: 183 SWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLF 242
Query: 143 GTCSIDTTCTIWDIEKGVVE--TQLI-AHDKEVYDICWGEARVF--ASVSADGSVRIFDL 197
G+ + D IWD + L+ AH EV + + F A+ SAD +V ++DL
Sbjct: 243 GSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 302
Query: 198 RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIR------------ 245
R+ + +ES + + + ++ W+ + +A+ D ++ + D+
Sbjct: 303 RNLKLKLHTFESHKDE--IFQVHWSPHNETILASSGTD-RRLNVWDLSKIGEEQSAEDAE 359
Query: 246 -SPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWEL 288
P + H A ++ +W P ICSV +D+ IW++
Sbjct: 360 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
>sp|Q16576|RBBP7_HUMAN Histone-binding protein RBBP7 OS=Homo sapiens GN=RBBP7 PE=1 SV=1
Length = 425
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 95/222 (42%), Gaps = 20/222 (9%)
Query: 134 WNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLI-------AHDKEVYDICWG--EARVFA 184
WN + + S D T +WDI G E +++ H V D+ W +F
Sbjct: 184 WNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFG 243
Query: 185 SVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDI 244
SV+ D + I+D R S + + L++N +AT D V + D+
Sbjct: 244 SVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKT-VALWDL 302
Query: 245 RSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPL--PPVAGPNGID-- 300
R+ L + E H+ + + W+P + + S G D + +W+L + + D
Sbjct: 303 RNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGP 362
Query: 301 PMSMYSAG---SEINQLQWSPAQPDWLAIAFS--NKMQLLKV 337
P ++ G ++I+ W+P +P W+ + S N MQ+ ++
Sbjct: 363 PELLFIHGGHTAKISDFSWNPNEP-WVICSVSEDNIMQIWQM 403
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 96/224 (42%), Gaps = 22/224 (9%)
Query: 84 SRKSSSNRHLLASSGDF-LRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRI 142
S S+ + HLL++S D + LWD+ E V + + A + W+ +
Sbjct: 183 SWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLF 242
Query: 143 GTCSIDTTCTIWDIEKGVVE--TQLI-AHDKEVYDICWGEARVF--ASVSADGSVRIFDL 197
G+ + D IWD + L+ AH EV + + F A+ SAD +V ++DL
Sbjct: 243 GSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 302
Query: 198 RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIR------------ 245
R+ + +ES + + + ++ W+ + +A+ D ++ + D+
Sbjct: 303 RNLKLKLHTFESHKDE--IFQVHWSPHNETILASSGTD-RRLNVWDLSKIGEEQSAEDAE 359
Query: 246 -SPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWEL 288
P + H A ++ +W P ICSV +D+ IW++
Sbjct: 360 DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQM 403
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127,757,113
Number of Sequences: 539616
Number of extensions: 5232189
Number of successful extensions: 14802
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 620
Number of HSP's that attempted gapping in prelim test: 12750
Number of HSP's gapped (non-prelim): 2148
length of query: 337
length of database: 191,569,459
effective HSP length: 118
effective length of query: 219
effective length of database: 127,894,771
effective search space: 28008954849
effective search space used: 28008954849
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)