Query 038533
Match_columns 337
No_of_seqs 605 out of 1673
Neff 11.5
Searched_HMMs 29240
Date Mon Mar 25 20:58:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038533.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038533hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 1.3E-48 4.4E-53 337.9 37.2 282 17-337 104-409 (410)
2 3ow8_A WD repeat-containing pr 100.0 2.2E-48 7.6E-53 325.5 34.7 281 19-337 30-319 (321)
3 4gqb_B Methylosome protein 50; 100.0 1.1E-48 3.8E-53 329.7 31.7 287 20-337 29-329 (344)
4 4g56_B MGC81050 protein; prote 100.0 1.7E-48 5.7E-53 331.0 32.0 292 19-337 40-341 (357)
5 2ynn_A Coatomer subunit beta'; 100.0 5.6E-46 1.9E-50 308.8 36.3 285 15-337 6-300 (304)
6 1got_B GT-beta; complex (GTP-b 100.0 7.5E-46 2.6E-50 312.9 36.7 279 19-336 53-340 (340)
7 3fm0_A Protein CIAO1; WDR39,SG 100.0 6.2E-46 2.1E-50 314.0 35.1 295 15-337 8-333 (345)
8 2pbi_B Guanine nucleotide-bind 100.0 4.7E-45 1.6E-49 309.5 37.6 280 19-336 62-354 (354)
9 3iz6_a 40S ribosomal protein R 100.0 4.5E-46 1.5E-50 319.0 30.9 283 19-337 64-373 (380)
10 4ery_A WD repeat-containing pr 100.0 6.3E-44 2.2E-48 297.7 36.9 280 19-337 21-310 (312)
11 3frx_A Guanine nucleotide-bind 100.0 1.7E-44 5.9E-49 301.8 30.2 288 19-337 15-315 (319)
12 1erj_A Transcriptional repress 100.0 9.2E-44 3.2E-48 306.0 34.9 288 17-337 60-387 (393)
13 2hes_X YDR267CP; beta-propelle 100.0 5.2E-44 1.8E-48 300.4 31.0 288 19-337 12-326 (330)
14 2xzm_R RACK1; ribosome, transl 100.0 1.1E-42 3.6E-47 294.1 37.4 289 19-337 19-338 (343)
15 1gxr_A ESG1, transducin-like e 100.0 2.2E-42 7.6E-47 291.0 36.7 289 12-337 42-335 (337)
16 2ynn_A Coatomer subunit beta'; 100.0 7.5E-43 2.6E-47 290.0 31.0 243 67-337 10-257 (304)
17 2j04_B YDR362CP, TAU91; beta p 100.0 5.1E-43 1.7E-47 309.4 28.7 310 12-337 124-515 (524)
18 4gqb_B Methylosome protein 50; 100.0 5.9E-42 2E-46 288.7 33.4 250 13-290 74-331 (344)
19 1nr0_A Actin interacting prote 100.0 5.8E-42 2E-46 310.8 34.5 283 21-337 18-353 (611)
20 1sq9_A Antiviral protein SKI8; 100.0 8.3E-42 2.8E-46 294.2 32.7 286 19-337 14-393 (397)
21 2ymu_A WD-40 repeat protein; u 100.0 1.5E-41 5E-46 306.6 35.4 272 19-336 301-577 (577)
22 3ow8_A WD repeat-containing pr 100.0 9.9E-42 3.4E-46 285.2 30.2 246 67-337 29-277 (321)
23 1vyh_C Platelet-activating fac 100.0 1.7E-41 5.9E-46 293.3 32.2 240 67-337 105-367 (410)
24 1nr0_A Actin interacting prote 100.0 7.9E-41 2.7E-45 303.4 36.4 282 19-337 57-395 (611)
25 4aow_A Guanine nucleotide-bind 100.0 5.3E-41 1.8E-45 283.1 32.2 289 19-337 36-335 (340)
26 2pm7_B Protein transport prote 100.0 3.4E-41 1.2E-45 279.1 30.2 249 67-337 6-283 (297)
27 4e54_B DNA damage-binding prot 100.0 2.9E-41 9.8E-46 294.4 31.2 284 19-337 117-428 (435)
28 1k8k_C P40, ARP2/3 complex 41 100.0 5.6E-41 1.9E-45 286.4 31.7 291 20-337 7-359 (372)
29 3k26_A Polycomb protein EED; W 100.0 3.5E-41 1.2E-45 286.9 29.6 295 19-337 16-364 (366)
30 3zwl_B Eukaryotic translation 100.0 8.5E-40 2.9E-44 278.5 37.3 281 16-337 27-344 (369)
31 3i2n_A WD repeat-containing pr 100.0 3.3E-41 1.1E-45 286.2 28.4 292 19-337 16-351 (357)
32 3ei3_B DNA damage-binding prot 100.0 8.5E-41 2.9E-45 286.7 31.0 283 19-337 71-380 (383)
33 2pm9_A Protein WEB1, protein t 100.0 1.5E-41 5.2E-46 294.3 26.4 293 18-337 9-335 (416)
34 2pm9_A Protein WEB1, protein t 100.0 1E-41 3.5E-46 295.4 25.3 299 14-337 60-412 (416)
35 3dm0_A Maltose-binding peripla 100.0 1.2E-40 4.2E-45 306.7 33.1 289 19-337 380-691 (694)
36 3dwl_C Actin-related protein 2 100.0 1.8E-41 6.1E-46 290.3 25.4 291 20-337 10-377 (377)
37 4h5i_A Guanine nucleotide-exch 100.0 1.9E-40 6.6E-45 282.2 31.3 311 14-337 7-341 (365)
38 3bg1_A Protein SEC13 homolog; 100.0 2.5E-41 8.6E-46 282.3 25.2 253 66-337 9-291 (316)
39 3vl1_A 26S proteasome regulato 100.0 2.8E-40 9.4E-45 286.9 31.3 283 23-337 99-417 (420)
40 1r5m_A SIR4-interacting protei 100.0 9.9E-40 3.4E-44 283.3 33.8 287 14-337 38-359 (425)
41 4gga_A P55CDC, cell division c 100.0 3E-39 1E-43 280.3 35.7 278 22-337 106-393 (420)
42 1got_B GT-beta; complex (GTP-b 100.0 7.2E-40 2.5E-44 276.3 30.9 241 20-287 96-340 (340)
43 2ymu_A WD-40 repeat protein; u 100.0 2.1E-39 7.2E-44 292.5 35.7 272 20-337 261-537 (577)
44 2xyi_A Probable histone-bindin 100.0 7.3E-40 2.5E-44 285.0 31.0 307 11-337 35-408 (430)
45 3fm0_A Protein CIAO1; WDR39,SG 100.0 7.4E-40 2.5E-44 276.8 29.6 252 67-336 12-280 (345)
46 4aez_A CDC20, WD repeat-contai 100.0 4.7E-39 1.6E-43 277.5 34.1 276 23-337 95-378 (401)
47 3vl1_A 26S proteasome regulato 100.0 1.2E-39 3.9E-44 283.0 30.4 279 23-337 58-363 (420)
48 3odt_A Protein DOA1; ubiquitin 100.0 1.6E-38 5.4E-43 264.8 34.9 279 13-337 9-294 (313)
49 3iz6_a 40S ribosomal protein R 100.0 4.1E-40 1.4E-44 282.0 25.4 245 67-337 63-327 (380)
50 1r5m_A SIR4-interacting protei 100.0 3.2E-39 1.1E-43 280.1 30.7 282 20-337 107-423 (425)
51 1erj_A Transcriptional repress 100.0 5.5E-39 1.9E-43 276.2 31.6 252 67-337 61-339 (393)
52 1gxr_A ESG1, transducin-like e 100.0 3.1E-39 1E-43 271.8 29.1 279 19-337 7-294 (337)
53 4g56_B MGC81050 protein; prote 100.0 3.5E-39 1.2E-43 273.7 29.4 247 15-289 88-342 (357)
54 3bg1_A Protein SEC13 homolog; 100.0 3.1E-39 1.1E-43 269.6 27.7 247 18-289 10-292 (316)
55 4ggc_A P55CDC, cell division c 100.0 9E-38 3.1E-42 260.9 35.9 277 23-337 27-313 (318)
56 2xzm_R RACK1; ribosome, transl 100.0 2.3E-38 7.8E-43 267.5 32.3 242 67-337 18-283 (343)
57 2pm7_B Protein transport prote 100.0 1.5E-38 5.2E-43 263.2 30.6 246 19-289 7-284 (297)
58 3dw8_B Serine/threonine-protei 100.0 1.2E-38 4.1E-43 278.7 31.3 290 18-336 25-443 (447)
59 3frx_A Guanine nucleotide-bind 100.0 1.5E-38 5.1E-43 265.9 29.2 241 67-337 14-265 (319)
60 2pbi_B Guanine nucleotide-bind 100.0 8.7E-38 3E-42 264.9 33.0 241 67-337 61-313 (354)
61 3gre_A Serine/threonine-protei 100.0 9.7E-40 3.3E-44 285.0 21.1 302 13-336 53-437 (437)
62 3v7d_B Cell division control p 100.0 3.7E-37 1.3E-41 270.7 35.5 275 19-337 119-419 (464)
63 3jrp_A Fusion protein of prote 100.0 3.6E-38 1.2E-42 269.5 28.1 251 67-337 8-285 (379)
64 2hes_X YDR267CP; beta-propelle 100.0 7E-38 2.4E-42 263.1 29.3 250 67-337 11-278 (330)
65 3mkq_A Coatomer beta'-subunit; 100.0 1.6E-37 5.5E-42 291.0 34.7 281 19-337 11-300 (814)
66 2aq5_A Coronin-1A; WD40 repeat 100.0 3.1E-38 1E-42 272.6 27.2 285 22-337 35-340 (402)
67 1p22_A F-BOX/WD-repeat protein 100.0 1.5E-37 5.3E-42 270.9 31.5 274 20-337 132-412 (435)
68 4ery_A WD repeat-containing pr 100.0 1.5E-37 5E-42 259.2 28.8 240 67-337 20-266 (312)
69 1yfq_A Cell cycle arrest prote 100.0 5E-37 1.7E-41 259.0 31.2 275 19-331 9-315 (342)
70 3sfz_A APAF-1, apoptotic pepti 100.0 5.4E-37 1.8E-41 299.5 35.0 283 18-337 612-911 (1249)
71 2oaj_A Protein SNI1; WD40 repe 100.0 1.4E-36 4.7E-41 285.4 34.2 202 13-246 9-242 (902)
72 3mmy_A MRNA export factor; mRN 100.0 9.4E-37 3.2E-41 259.6 29.7 287 11-335 28-342 (368)
73 4a11_B DNA excision repair pro 100.0 4.7E-36 1.6E-40 258.9 34.3 287 19-337 41-363 (408)
74 3dm0_A Maltose-binding peripla 100.0 8.4E-37 2.9E-41 281.2 30.4 244 67-337 379-630 (694)
75 4aow_A Guanine nucleotide-bind 100.0 3.2E-36 1.1E-40 253.9 30.5 243 67-337 35-284 (340)
76 3dwl_C Actin-related protein 2 100.0 5.3E-38 1.8E-42 268.7 19.8 244 68-336 9-278 (377)
77 2oaj_A Protein SNI1; WD40 repe 100.0 4.6E-36 1.6E-40 281.9 32.9 302 13-337 90-659 (902)
78 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.9E-35 6.5E-40 258.4 34.7 269 20-337 158-440 (445)
79 3f3f_A Nucleoporin SEH1; struc 100.0 5.1E-36 1.7E-40 253.0 29.7 288 18-337 8-335 (351)
80 1pgu_A Actin interacting prote 100.0 6.5E-36 2.2E-40 271.5 32.1 278 20-337 159-612 (615)
81 2ovr_B FBW7, F-BOX/WD repeat p 100.0 4.5E-35 1.6E-39 256.1 35.8 268 19-337 116-389 (445)
82 2j04_B YDR362CP, TAU91; beta p 100.0 4.7E-37 1.6E-41 271.4 23.1 253 67-337 130-426 (524)
83 1k8k_C P40, ARP2/3 complex 41 100.0 7E-36 2.4E-40 254.9 29.2 245 67-337 5-272 (372)
84 1pgu_A Actin interacting prote 100.0 1.4E-35 4.9E-40 269.3 32.0 276 19-337 16-326 (615)
85 3jrp_A Fusion protein of prote 100.0 3.8E-36 1.3E-40 257.0 26.5 247 18-289 8-286 (379)
86 3jro_A Fusion protein of prote 100.0 2.3E-36 7.9E-41 280.0 25.4 252 66-337 5-283 (753)
87 3k26_A Polycomb protein EED; W 100.0 2.3E-35 7.8E-40 251.0 27.1 240 20-289 68-365 (366)
88 3sfz_A APAF-1, apoptotic pepti 100.0 1.4E-35 4.9E-40 289.5 28.6 275 19-337 959-1247(1249)
89 3zwl_B Eukaryotic translation 100.0 1.9E-34 6.5E-39 245.4 31.6 242 67-337 29-302 (369)
90 1sq9_A Antiviral protein SKI8; 100.0 3.2E-35 1.1E-39 253.1 26.5 242 67-337 13-320 (397)
91 2vdu_B TRNA (guanine-N(7)-)-me 100.0 5.6E-34 1.9E-38 249.4 34.1 282 22-336 5-388 (450)
92 4gq1_A NUP37; propeller, trans 100.0 2.6E-35 8.9E-40 253.2 25.0 302 16-337 10-387 (393)
93 2xyi_A Probable histone-bindin 100.0 1.9E-34 6.6E-39 250.8 30.5 255 14-289 121-409 (430)
94 3i2n_A WD repeat-containing pr 100.0 9.6E-35 3.3E-39 246.3 26.5 249 67-337 15-289 (357)
95 3mkq_A Coatomer beta'-subunit; 100.0 1.2E-34 4.2E-39 271.5 29.6 242 67-337 10-257 (814)
96 3v7d_B Cell division control p 100.0 9.5E-34 3.3E-38 249.0 32.0 276 14-335 154-459 (464)
97 4aez_A CDC20, WD repeat-contai 100.0 1.2E-33 4E-38 243.8 31.4 233 73-337 96-334 (401)
98 4e54_B DNA damage-binding prot 100.0 1.3E-34 4.5E-39 252.3 25.5 245 67-337 116-385 (435)
99 1yfq_A Cell cycle arrest prote 100.0 4.5E-34 1.5E-38 240.9 28.0 245 67-337 8-280 (342)
100 3dw8_B Serine/threonine-protei 100.0 1.2E-34 4.2E-39 253.3 25.0 250 67-337 25-371 (447)
101 4h5i_A Guanine nucleotide-exch 100.0 3.6E-34 1.2E-38 243.6 26.6 247 20-289 72-342 (365)
102 2j04_A TAU60, YPL007P, hypothe 100.0 2.1E-34 7.2E-39 249.4 24.5 260 20-337 14-295 (588)
103 3vu4_A KMHSV2; beta-propeller 100.0 6.7E-33 2.3E-37 235.0 33.1 279 19-337 17-334 (355)
104 3gre_A Serine/threonine-protei 100.0 1.1E-34 3.9E-39 252.9 21.7 249 67-337 60-357 (437)
105 3jro_A Fusion protein of prote 100.0 3.4E-34 1.2E-38 265.4 25.6 248 18-290 6-285 (753)
106 4gga_A P55CDC, cell division c 100.0 5.9E-33 2E-37 240.8 31.4 235 20-289 146-394 (420)
107 3ei3_B DNA damage-binding prot 100.0 2.5E-33 8.4E-38 240.3 28.6 239 67-337 70-337 (383)
108 3odt_A Protein DOA1; ubiquitin 100.0 5.5E-33 1.9E-37 231.2 29.3 233 67-337 15-253 (313)
109 2aq5_A Coronin-1A; WD40 repeat 100.0 4.8E-33 1.6E-37 240.1 28.2 245 70-337 34-297 (402)
110 2vdu_B TRNA (guanine-N(7)-)-me 100.0 9.8E-33 3.3E-37 241.6 29.3 246 70-337 4-337 (450)
111 3vu4_A KMHSV2; beta-propeller 100.0 3.6E-32 1.2E-36 230.5 28.9 231 67-337 16-269 (355)
112 3bws_A Protein LP49; two-domai 100.0 8.2E-32 2.8E-36 234.5 31.1 286 13-337 114-430 (433)
113 1p22_A F-BOX/WD-repeat protein 100.0 5.4E-32 1.9E-36 235.9 29.3 232 67-337 130-363 (435)
114 4a11_B DNA excision repair pro 100.0 8.8E-32 3E-36 232.2 29.4 280 20-336 98-402 (408)
115 3lrv_A PRE-mRNA-splicing facto 100.0 7.5E-32 2.6E-36 227.6 28.1 260 31-335 48-329 (343)
116 3mmy_A MRNA export factor; mRN 100.0 1.7E-31 5.8E-36 227.1 28.0 244 66-337 35-302 (368)
117 4ggc_A P55CDC, cell division c 100.0 1.8E-30 6.2E-35 216.5 32.5 237 72-337 27-271 (318)
118 3lrv_A PRE-mRNA-splicing facto 100.0 9.5E-32 3.2E-36 227.0 22.4 222 93-337 50-290 (343)
119 4gq1_A NUP37; propeller, trans 100.0 9.3E-32 3.2E-36 231.1 22.6 235 31-289 101-388 (393)
120 1l0q_A Surface layer protein; 100.0 7.4E-30 2.5E-34 219.2 32.8 261 32-337 3-273 (391)
121 2w18_A PALB2, fancn, partner a 100.0 1.9E-30 6.5E-35 211.6 26.8 277 24-337 42-355 (356)
122 2j04_A TAU60, YPL007P, hypothe 100.0 5.7E-31 2E-35 228.1 22.8 265 19-327 50-349 (588)
123 3bws_A Protein LP49; two-domai 100.0 3.2E-29 1.1E-33 218.1 28.8 259 44-337 98-388 (433)
124 3f3f_A Nucleoporin SEH1; struc 100.0 1.1E-29 3.8E-34 214.0 23.3 209 114-337 4-247 (351)
125 1l0q_A Surface layer protein; 100.0 6.1E-28 2.1E-32 207.2 31.3 241 13-289 23-274 (391)
126 2w18_A PALB2, fancn, partner a 100.0 1.3E-27 4.3E-32 195.1 22.4 184 93-289 147-356 (356)
127 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.9E-27 6.6E-32 205.4 22.7 278 22-337 63-385 (415)
128 2hqs_A Protein TOLB; TOLB, PAL 100.0 2.5E-25 8.4E-30 192.3 30.1 248 31-321 143-410 (415)
129 1ri6_A Putative isomerase YBHE 100.0 2.2E-25 7.6E-30 187.6 28.8 268 44-337 14-306 (343)
130 2ojh_A Uncharacterized protein 100.0 3.6E-26 1.2E-30 188.2 23.4 254 43-330 20-293 (297)
131 3hfq_A Uncharacterized protein 99.9 3.6E-25 1.2E-29 187.0 28.1 282 32-336 3-314 (347)
132 2ecf_A Dipeptidyl peptidase IV 99.9 2.6E-25 8.9E-30 206.3 28.2 283 21-337 36-411 (741)
133 1nir_A Nitrite reductase; hemo 99.9 1.5E-24 5.2E-29 193.0 31.9 294 14-337 171-512 (543)
134 3vgz_A Uncharacterized protein 99.9 8E-24 2.7E-28 178.9 33.4 286 15-329 34-334 (353)
135 3u4y_A Uncharacterized protein 99.9 5.4E-24 1.8E-28 178.5 27.7 272 31-337 10-302 (331)
136 2z3z_A Dipeptidyl aminopeptida 99.9 5E-24 1.7E-28 196.7 29.8 283 22-337 82-433 (706)
137 1nir_A Nitrite reductase; hemo 99.9 6.4E-24 2.2E-28 188.9 28.4 278 28-337 144-456 (543)
138 1xfd_A DIP, dipeptidyl aminope 99.9 9.7E-25 3.3E-29 202.0 22.5 285 21-337 16-391 (723)
139 1pby_B Quinohemoprotein amine 99.9 3.6E-24 1.2E-28 179.8 23.7 268 32-337 2-308 (337)
140 1k32_A Tricorn protease; prote 99.9 5.9E-24 2E-28 203.9 27.9 278 19-336 201-499 (1045)
141 2ecf_A Dipeptidyl peptidase IV 99.9 2E-23 6.8E-28 193.7 27.0 282 23-336 110-456 (741)
142 1ri6_A Putative isomerase YBHE 99.9 1.3E-22 4.5E-27 170.6 26.5 278 14-320 30-334 (343)
143 2z3z_A Dipeptidyl aminopeptida 99.9 3.5E-23 1.2E-27 191.0 23.9 272 23-329 27-376 (706)
144 3scy_A Hypothetical bacterial 99.9 2E-21 6.7E-26 165.0 31.7 278 31-336 13-334 (361)
145 1xfd_A DIP, dipeptidyl aminope 99.9 2.7E-22 9.2E-27 185.6 28.4 281 23-327 62-428 (723)
146 2oit_A Nucleoporin 214KDA; NH2 99.9 3.7E-22 1.3E-26 173.0 27.2 205 22-247 37-279 (434)
147 2ojh_A Uncharacterized protein 99.9 5.4E-22 1.9E-26 163.1 23.3 214 100-337 23-256 (297)
148 2oit_A Nucleoporin 214KDA; NH2 99.9 7.4E-23 2.5E-27 177.4 18.2 198 127-337 37-276 (434)
149 3o4h_A Acylamino-acid-releasin 99.9 4.3E-22 1.5E-26 179.7 23.2 264 21-336 21-312 (582)
150 3u4y_A Uncharacterized protein 99.9 3.1E-21 1.1E-25 161.6 26.9 227 92-337 11-250 (331)
151 1jmx_B Amine dehydrogenase; ox 99.9 4.2E-21 1.4E-25 161.9 26.5 278 26-337 4-323 (349)
152 1jof_A Carboxy-CIS,CIS-muconat 99.9 5.2E-21 1.8E-25 162.6 26.3 278 33-337 4-339 (365)
153 3vgz_A Uncharacterized protein 99.9 7.3E-21 2.5E-25 160.7 25.8 236 69-337 39-301 (353)
154 1k32_A Tricorn protease; prote 99.9 3.4E-21 1.2E-25 184.8 26.7 268 21-337 295-635 (1045)
155 3o4h_A Acylamino-acid-releasin 99.9 1.1E-20 3.7E-25 170.5 20.9 229 70-337 21-274 (582)
156 3hfq_A Uncharacterized protein 99.9 1.6E-19 5.6E-24 152.2 26.5 254 18-289 36-316 (347)
157 1z68_A Fibroblast activation p 99.9 2E-20 6.8E-25 173.0 21.7 273 25-337 19-389 (719)
158 3scy_A Hypothetical bacterial 99.9 1.6E-18 5.5E-23 147.0 31.2 276 20-317 48-360 (361)
159 1pby_B Quinohemoprotein amine 99.9 1.8E-19 6.3E-24 151.0 24.9 239 14-289 23-309 (337)
160 3pe7_A Oligogalacturonate lyas 99.8 9E-19 3.1E-23 149.9 24.8 275 27-336 41-379 (388)
161 1z68_A Fibroblast activation p 99.8 1.1E-18 3.8E-23 161.3 26.0 288 23-336 61-440 (719)
162 4a5s_A Dipeptidyl peptidase 4 99.8 1.6E-18 5.4E-23 160.6 26.5 245 70-336 16-350 (740)
163 3azo_A Aminopeptidase; POP fam 99.8 7.7E-18 2.6E-22 154.3 27.5 284 19-335 21-363 (662)
164 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.2E-17 4E-22 141.9 22.9 244 22-289 40-340 (365)
165 1q7f_A NHL, brain tumor CG1071 99.8 2E-16 6.7E-21 129.6 28.3 241 68-337 27-278 (286)
166 4a5s_A Dipeptidyl peptidase 4 99.8 8.9E-17 3E-21 148.9 28.6 266 22-328 17-382 (740)
167 2dg1_A DRP35, lactonase; beta 99.8 2.2E-16 7.6E-21 132.2 27.9 263 22-329 6-300 (333)
168 3c5m_A Oligogalacturonate lyas 99.8 9.6E-18 3.3E-22 143.8 20.0 273 24-336 38-379 (396)
169 3pe7_A Oligogalacturonate lyas 99.8 1.3E-16 4.3E-21 136.5 22.5 230 76-337 41-327 (388)
170 3fvz_A Peptidyl-glycine alpha- 99.8 1E-15 3.4E-20 128.0 26.4 238 70-337 23-320 (329)
171 3fvz_A Peptidyl-glycine alpha- 99.8 3.3E-15 1.1E-19 124.9 29.4 244 21-289 23-321 (329)
172 2gop_A Trilobed protease; beta 99.8 6.2E-16 2.1E-20 130.2 25.0 257 23-336 16-328 (347)
173 1jmx_B Amine dehydrogenase; ox 99.8 3.1E-16 1.1E-20 131.9 22.5 241 15-289 34-324 (349)
174 1q7f_A NHL, brain tumor CG1071 99.8 1.6E-15 5.5E-20 124.2 26.1 235 22-289 30-279 (286)
175 2oiz_A Aromatic amine dehydrog 99.7 6.3E-15 2.2E-19 124.6 29.6 274 15-321 44-360 (361)
176 3azo_A Aminopeptidase; POP fam 99.7 5.7E-16 2E-20 141.9 20.8 238 67-336 20-320 (662)
177 1rwi_B Serine/threonine-protei 99.7 9.3E-15 3.2E-19 118.5 25.5 234 72-337 25-262 (270)
178 3c5m_A Oligogalacturonate lyas 99.7 3.6E-16 1.2E-20 134.0 17.6 233 71-337 36-327 (396)
179 1rwi_B Serine/threonine-protei 99.7 3E-14 1E-18 115.4 26.9 233 23-289 25-263 (270)
180 3e5z_A Putative gluconolactona 99.7 1.2E-14 4E-19 119.7 24.3 229 68-333 25-281 (296)
181 2xdw_A Prolyl endopeptidase; a 99.7 2.4E-14 8.1E-19 132.1 28.7 275 31-337 83-412 (710)
182 2oiz_A Aromatic amine dehydrog 99.7 6.2E-15 2.1E-19 124.7 22.8 259 44-337 30-332 (361)
183 3dsm_A Uncharacterized protein 99.7 1.8E-14 6.2E-19 120.3 25.4 257 44-337 16-300 (328)
184 2z2n_A Virginiamycin B lyase; 99.7 1.4E-13 4.8E-18 113.1 30.5 270 22-336 15-292 (299)
185 2bkl_A Prolyl endopeptidase; m 99.7 4.6E-15 1.6E-19 136.5 23.4 275 30-337 78-395 (695)
186 2dg1_A DRP35, lactonase; beta 99.7 1.1E-14 3.6E-19 122.0 21.7 239 71-336 6-260 (333)
187 3e5z_A Putative gluconolactona 99.7 1.2E-13 4.2E-18 113.5 27.0 232 21-289 27-285 (296)
188 1qks_A Cytochrome CD1 nitrite 99.6 6.2E-13 2.1E-17 118.3 29.9 273 31-337 166-475 (567)
189 3no2_A Uncharacterized protein 99.6 1.9E-13 6.4E-18 111.0 23.8 211 31-277 5-230 (276)
190 2xdw_A Prolyl endopeptidase; a 99.6 3.5E-13 1.2E-17 124.3 28.0 244 23-291 126-415 (710)
191 1qks_A Cytochrome CD1 nitrite 99.6 3.9E-12 1.3E-16 113.2 33.1 297 13-336 188-535 (567)
192 3dsm_A Uncharacterized protein 99.6 7.1E-13 2.4E-17 110.6 26.8 238 22-289 44-301 (328)
193 2qc5_A Streptogramin B lactona 99.6 4E-12 1.4E-16 104.4 30.0 272 21-336 19-297 (300)
194 3hrp_A Uncharacterized protein 99.6 2.6E-12 8.9E-17 110.3 29.2 235 71-337 131-408 (409)
195 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 2E-12 6.9E-17 107.0 27.8 235 71-337 18-297 (314)
196 2bkl_A Prolyl endopeptidase; m 99.6 7.5E-14 2.6E-18 128.4 20.8 244 22-290 121-397 (695)
197 2z2n_A Virginiamycin B lyase; 99.6 3.6E-12 1.2E-16 104.6 28.4 235 69-336 13-252 (299)
198 2gop_A Trilobed protease; beta 99.6 1.3E-13 4.6E-18 115.9 19.8 213 71-335 15-288 (347)
199 1xip_A Nucleoporin NUP159; bet 99.6 5.2E-14 1.8E-18 118.4 16.8 171 72-276 39-230 (388)
200 1yr2_A Prolyl oligopeptidase; 99.6 2.9E-13 1E-17 125.4 23.4 274 31-337 118-439 (741)
201 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 1.5E-11 5.1E-16 101.8 26.4 245 21-289 17-298 (314)
202 3no2_A Uncharacterized protein 99.5 7.6E-12 2.6E-16 101.5 22.1 211 92-326 6-230 (276)
203 2qc5_A Streptogramin B lactona 99.5 7.4E-11 2.5E-15 96.7 27.8 234 70-336 19-257 (300)
204 1xip_A Nucleoporin NUP159; bet 99.5 5.3E-13 1.8E-17 112.3 14.8 176 23-233 39-232 (388)
205 3g4e_A Regucalcin; six bladed 99.5 5.2E-11 1.8E-15 97.9 25.2 224 73-328 15-261 (297)
206 2mad_H Methylamine dehydrogena 99.5 7E-10 2.4E-14 93.9 32.1 256 46-337 48-348 (373)
207 1yr2_A Prolyl oligopeptidase; 99.5 1.7E-11 6E-16 113.5 23.3 245 22-290 163-441 (741)
208 3g4e_A Regucalcin; six bladed 99.5 6.7E-11 2.3E-15 97.2 24.2 231 22-279 13-262 (297)
209 2ghs_A AGR_C_1268P; regucalcin 99.5 2E-10 6.9E-15 95.6 27.3 219 73-328 51-291 (326)
210 2qe8_A Uncharacterized protein 99.4 5.8E-11 2E-15 99.6 22.4 265 22-329 17-311 (343)
211 3iuj_A Prolyl endopeptidase; h 99.4 1E-10 3.5E-15 107.5 23.7 237 67-337 125-403 (693)
212 2ghs_A AGR_C_1268P; regucalcin 99.4 6.6E-10 2.3E-14 92.5 26.7 227 23-280 50-293 (326)
213 3sjl_D Methylamine dehydrogena 99.4 3.6E-10 1.2E-14 94.8 24.5 275 31-337 44-361 (386)
214 3dr2_A Exported gluconolactona 99.4 3.1E-10 1E-14 93.6 23.1 226 70-334 44-302 (305)
215 3sjl_D Methylamine dehydrogena 99.4 3E-09 1E-13 89.2 28.2 273 14-319 71-384 (386)
216 3hrp_A Uncharacterized protein 99.3 1.6E-09 5.6E-14 92.9 25.6 232 23-289 132-409 (409)
217 3dr2_A Exported gluconolactona 99.3 1.9E-09 6.3E-14 88.9 23.5 224 21-281 44-298 (305)
218 3c75_H MADH, methylamine dehyd 99.3 9.7E-10 3.3E-14 93.8 22.1 260 45-337 99-400 (426)
219 3iuj_A Prolyl endopeptidase; h 99.3 2.3E-10 7.8E-15 105.2 19.7 200 127-337 129-357 (693)
220 2mad_H Methylamine dehydrogena 99.3 2.1E-08 7.2E-13 84.8 29.9 239 26-289 70-349 (373)
221 2ece_A 462AA long hypothetical 99.2 1.1E-08 3.8E-13 86.6 24.0 226 92-327 97-399 (462)
222 1npe_A Nidogen, entactin; glyc 99.1 2.4E-07 8.1E-12 74.6 27.4 256 31-321 1-263 (267)
223 3hxj_A Pyrrolo-quinoline quino 99.1 2.8E-08 9.6E-13 82.6 22.5 211 93-336 110-321 (330)
224 3q7m_A Lipoprotein YFGL, BAMB; 99.1 9E-08 3.1E-12 81.2 25.9 260 31-336 103-375 (376)
225 3c75_H MADH, methylamine dehyd 99.1 9E-08 3.1E-12 81.7 25.3 252 13-289 110-401 (426)
226 3hxj_A Pyrrolo-quinoline quino 99.1 2.1E-09 7.1E-14 89.5 14.8 257 26-336 24-281 (330)
227 2qe8_A Uncharacterized protein 99.1 1.3E-08 4.3E-13 85.4 19.5 203 127-336 17-275 (343)
228 1yiq_A Quinohemoprotein alcoho 99.1 2.8E-08 9.5E-13 91.0 23.0 184 131-327 239-536 (689)
229 2hz6_A Endoplasmic reticulum t 99.1 1.6E-10 5.6E-15 97.8 7.8 174 93-289 12-191 (369)
230 1kb0_A Quinohemoprotein alcoho 99.1 3.6E-08 1.2E-12 90.0 23.6 270 29-326 126-537 (677)
231 2ece_A 462AA long hypothetical 99.1 2E-08 6.9E-13 85.0 19.6 195 136-337 93-350 (462)
232 1mda_H Methylamine dehydrogena 99.0 8.9E-08 3E-12 80.3 21.5 242 13-289 57-345 (368)
233 1npe_A Nidogen, entactin; glyc 99.0 9E-07 3.1E-11 71.2 26.8 223 93-336 4-235 (267)
234 2iwa_A Glutamine cyclotransfer 99.0 1.5E-07 5E-12 74.9 20.2 196 72-289 22-236 (266)
235 2hz6_A Endoplasmic reticulum t 99.0 3.4E-10 1.2E-14 95.8 5.5 200 31-271 9-216 (369)
236 1kb0_A Quinohemoprotein alcoho 99.0 1.7E-07 5.8E-12 85.6 23.2 226 93-337 131-505 (677)
237 1mda_H Methylamine dehydrogena 99.0 2.1E-08 7.1E-13 84.2 15.6 213 100-337 47-344 (368)
238 4a2l_A BT_4663, two-component 98.9 1.1E-05 3.6E-10 75.5 34.4 288 21-336 214-523 (795)
239 2iwa_A Glutamine cyclotransfer 98.9 5.7E-07 1.9E-11 71.5 21.8 192 129-336 23-234 (266)
240 3q7m_A Lipoprotein YFGL, BAMB; 98.9 1.6E-06 5.5E-11 73.4 25.8 261 31-336 53-334 (376)
241 1yiq_A Quinohemoprotein alcoho 98.9 7.2E-07 2.5E-11 81.7 23.1 150 93-251 124-342 (689)
242 4a2l_A BT_4663, two-component 98.9 1.4E-05 4.9E-10 74.6 32.2 277 24-336 175-477 (795)
243 2fp8_A Strictosidine synthase; 98.9 4.3E-06 1.5E-10 69.2 25.8 239 72-337 20-311 (322)
244 1fwx_A Nitrous oxide reductase 98.9 8.2E-07 2.8E-11 77.9 22.0 230 72-327 86-406 (595)
245 3v64_C Agrin; beta propeller, 98.9 1.7E-05 6E-10 66.3 29.3 219 93-335 46-271 (349)
246 3v65_B Low-density lipoprotein 98.8 1.2E-05 4E-10 68.4 27.8 220 93-336 89-315 (386)
247 3nok_A Glutaminyl cyclase; bet 98.8 1.1E-06 3.6E-11 69.2 19.3 185 128-327 56-253 (268)
248 2p4o_A Hypothetical protein; p 98.8 1.4E-05 4.9E-10 65.5 27.4 225 71-328 32-277 (306)
249 1ijq_A LDL receptor, low-densi 98.8 3.1E-05 1E-09 63.9 28.7 220 93-336 4-235 (316)
250 3qqz_A Putative uncharacterize 98.8 2.4E-05 8.2E-10 61.8 26.4 197 127-336 27-250 (255)
251 3v65_B Low-density lipoprotein 98.8 4.6E-05 1.6E-09 64.7 29.5 231 26-289 81-317 (386)
252 1k3i_A Galactose oxidase precu 98.8 3.9E-07 1.3E-11 83.2 17.8 274 31-328 198-530 (656)
253 3nol_A Glutamine cyclotransfer 98.8 4.1E-06 1.4E-10 65.9 21.0 193 13-235 32-245 (262)
254 3mbr_X Glutamine cyclotransfer 98.8 3.4E-06 1.1E-10 65.7 20.3 197 12-235 9-224 (243)
255 3nol_A Glutamine cyclotransfer 98.7 3.3E-06 1.1E-10 66.4 19.9 187 128-328 44-244 (262)
256 3nok_A Glutaminyl cyclase; bet 98.7 3E-06 1E-10 66.6 19.2 187 14-232 45-253 (268)
257 3v64_C Agrin; beta propeller, 98.7 7.4E-05 2.5E-09 62.5 31.0 234 23-289 35-274 (349)
258 3mbr_X Glutamine cyclotransfer 98.7 3.9E-06 1.3E-10 65.4 18.9 185 70-278 20-223 (243)
259 3p5b_L Low density lipoprotein 98.7 0.00013 4.4E-09 62.2 29.2 183 92-289 85-276 (400)
260 3v9f_A Two-component system se 98.6 0.00011 3.8E-09 68.5 30.6 282 22-335 258-564 (781)
261 3sov_A LRP-6, low-density lipo 98.6 8.9E-05 3E-09 61.1 26.3 222 93-336 7-235 (318)
262 3v9f_A Two-component system se 98.6 0.0001 3.5E-09 68.8 29.8 280 22-335 211-520 (781)
263 2p4o_A Hypothetical protein; p 98.6 7E-05 2.4E-09 61.4 25.2 231 12-280 22-278 (306)
264 2fp8_A Strictosidine synthase; 98.5 1.5E-05 5.1E-10 65.9 19.3 189 128-328 20-248 (322)
265 4hw6_A Hypothetical protein, I 98.5 0.00012 4.1E-09 63.1 25.4 236 72-336 140-430 (433)
266 3qqz_A Putative uncharacterize 98.5 5.7E-05 1.9E-09 59.6 21.4 198 68-288 24-251 (255)
267 1kv9_A Type II quinohemoprotei 98.5 3.5E-05 1.2E-09 70.4 22.4 154 131-290 234-488 (668)
268 1kv9_A Type II quinohemoprotei 98.5 4.1E-05 1.4E-09 69.9 22.7 149 93-251 120-337 (668)
269 1fwx_A Nitrous oxide reductase 98.5 1.2E-05 4.3E-10 70.6 17.8 190 138-337 100-359 (595)
270 4a0p_A LRP6, LRP-6, low-densit 98.5 0.00047 1.6E-08 62.3 28.6 222 93-336 9-234 (628)
271 2ad6_A Methanol dehydrogenase 98.5 4.5E-05 1.5E-09 68.2 21.7 136 150-290 273-494 (571)
272 3sov_A LRP-6, low-density lipo 98.5 0.00039 1.3E-08 57.2 27.2 227 33-290 6-238 (318)
273 2xe4_A Oligopeptidase B; hydro 98.4 2.9E-05 9.8E-10 72.0 20.4 193 128-335 175-394 (751)
274 3tc9_A Hypothetical hydrolase; 98.4 0.00038 1.3E-08 59.9 24.7 153 72-246 138-301 (430)
275 1ijq_A LDL receptor, low-densi 98.4 0.00068 2.3E-08 55.7 30.6 225 33-289 3-237 (316)
276 3m0c_C LDL receptor, low-densi 98.3 0.0015 5.1E-08 60.5 28.7 183 93-289 397-588 (791)
277 3p5b_L Low density lipoprotein 98.3 0.0011 3.6E-08 56.6 31.5 227 31-289 83-319 (400)
278 2xe4_A Oligopeptidase B; hydro 98.3 4.6E-05 1.6E-09 70.6 18.8 195 68-288 170-396 (751)
279 3m0c_C LDL receptor, low-densi 98.3 0.0023 8E-08 59.2 29.0 227 32-289 396-631 (791)
280 1flg_A Protein (quinoprotein e 98.3 0.0017 5.9E-08 58.1 27.5 55 149-204 291-360 (582)
281 3kya_A Putative phosphatase; s 98.3 0.0012 4.1E-08 57.3 25.1 238 73-336 141-472 (496)
282 1n7d_A LDL receptor, low-densi 98.2 1.5E-05 5.3E-10 73.0 13.7 175 99-289 386-570 (699)
283 1k3i_A Galactose oxidase precu 98.2 2.8E-05 9.5E-10 71.0 14.6 226 26-279 247-530 (656)
284 1w6s_A Methanol dehydrogenase 98.2 0.0005 1.7E-08 61.6 21.7 72 132-205 246-348 (599)
285 2ad6_A Methanol dehydrogenase 98.2 0.0015 5.3E-08 58.3 24.9 152 93-254 118-342 (571)
286 2xzh_A Clathrin heavy chain 1; 98.1 0.0019 6.4E-08 52.3 23.1 231 31-289 78-331 (365)
287 4a0p_A LRP6, LRP-6, low-densit 98.1 0.0051 1.7E-07 55.6 32.9 225 32-289 7-236 (628)
288 3ei3_A DNA damage-binding prot 98.1 0.0068 2.3E-07 58.7 28.8 188 139-335 844-1058(1158)
289 2xbg_A YCF48-like protein; pho 98.1 0.0028 9.7E-08 52.3 26.7 233 21-288 79-320 (327)
290 1w6s_A Methanol dehydrogenase 98.1 0.0026 9E-08 57.0 24.4 150 94-254 124-349 (599)
291 1bpo_A Protein (clathrin); cla 98.1 0.004 1.4E-07 52.5 23.9 230 31-289 77-330 (494)
292 3amr_A 3-phytase; beta-propell 98.1 0.00068 2.3E-08 55.7 18.1 189 139-337 40-261 (355)
293 2ism_A Putative oxidoreductase 98.0 0.0048 1.6E-07 51.5 23.8 233 72-327 32-333 (352)
294 1n7d_A LDL receptor, low-densi 98.0 0.00015 5.3E-09 66.4 14.9 197 71-289 406-613 (699)
295 2p9w_A MAL S 1 allergenic prot 98.0 0.0034 1.2E-07 51.2 20.6 208 70-289 12-264 (334)
296 2xbg_A YCF48-like protein; pho 97.9 0.0056 1.9E-07 50.5 31.1 272 20-335 34-318 (327)
297 2p9w_A MAL S 1 allergenic prot 97.9 0.0014 4.6E-08 53.5 17.1 156 170-337 13-213 (334)
298 1flg_A Protein (quinoprotein e 97.9 0.013 4.5E-07 52.5 25.1 61 190-254 291-362 (582)
299 4hw6_A Hypothetical protein, I 97.8 0.0045 1.5E-07 53.2 20.1 155 128-289 140-303 (433)
300 2xn4_A Kelch-like protein 2; s 97.7 0.0063 2.2E-07 49.4 19.3 179 93-289 64-275 (302)
301 3ii7_A Kelch-like protein 7; p 97.7 0.0089 3E-07 48.6 20.2 181 93-289 58-271 (306)
302 3s94_A LRP-6, low-density lipo 97.7 0.025 8.5E-07 51.1 27.6 186 93-289 320-509 (619)
303 3ei3_A DNA damage-binding prot 97.7 0.032 1.1E-06 54.1 26.1 171 150-336 808-996 (1158)
304 3amr_A 3-phytase; beta-propell 97.7 0.0098 3.3E-07 48.9 19.3 183 93-289 43-262 (355)
305 3tc9_A Hypothetical hydrolase; 97.7 0.0022 7.7E-08 55.1 16.4 151 171-336 138-298 (430)
306 3a9g_A Putative uncharacterize 97.6 0.02 6.7E-07 47.8 22.3 235 72-327 30-330 (354)
307 2vpj_A Kelch-like protein 12; 97.6 0.015 5.1E-07 47.1 19.9 179 93-289 65-277 (301)
308 2xzh_A Clathrin heavy chain 1; 97.6 0.021 7.1E-07 46.4 27.0 262 31-333 36-326 (365)
309 3ii7_A Kelch-like protein 7; p 97.5 0.015 5.2E-07 47.2 18.4 178 93-289 14-224 (306)
310 1zgk_A Kelch-like ECH-associat 97.5 0.018 6E-07 47.0 18.5 172 100-289 91-286 (308)
311 3sre_A PON1, serum paraoxonase 97.5 0.022 7.4E-07 47.3 18.8 189 129-329 52-287 (355)
312 3kya_A Putative phosphatase; s 97.5 0.012 4.1E-07 51.1 17.7 163 171-335 140-337 (496)
313 3pbp_A Nucleoporin NUP82; beta 97.4 0.043 1.5E-06 46.3 19.7 146 31-195 32-208 (452)
314 3pbp_A Nucleoporin NUP82; beta 97.4 0.036 1.2E-06 46.7 18.6 150 179-333 31-206 (452)
315 1xi4_A Clathrin heavy chain; a 97.4 0.12 4E-06 50.6 24.1 250 9-292 6-291 (1630)
316 1xi4_A Clathrin heavy chain; a 97.3 0.04 1.4E-06 53.6 20.7 231 31-289 77-330 (1630)
317 3ott_A Two-component system se 97.3 0.1 3.4E-06 48.5 31.0 267 21-326 21-296 (758)
318 3s94_A LRP-6, low-density lipo 97.3 0.1 3.5E-06 47.0 35.9 282 22-336 84-420 (619)
319 3sre_A PON1, serum paraoxonase 97.2 0.039 1.3E-06 45.8 17.5 141 188-337 81-250 (355)
320 2vpj_A Kelch-like protein 12; 97.0 0.095 3.3E-06 42.3 19.1 191 31-246 63-278 (301)
321 4asc_A Kelch repeat and BTB do 97.0 0.11 3.6E-06 42.4 20.4 133 101-246 69-221 (315)
322 2ism_A Putative oxidoreductase 97.0 0.13 4.3E-06 42.8 21.9 233 22-277 31-332 (352)
323 1bpo_A Protein (clathrin); cla 96.9 0.16 5.5E-06 43.0 26.3 220 100-337 49-287 (494)
324 2xn4_A Kelch-like protein 2; s 96.9 0.13 4.5E-06 41.5 17.6 141 93-246 111-276 (302)
325 2uvk_A YJHT; unknown function, 96.8 0.19 6.3E-06 41.8 18.9 90 100-197 87-224 (357)
326 1zgk_A Kelch-like ECH-associat 96.6 0.22 7.4E-06 40.4 18.8 141 93-246 124-287 (308)
327 2uvk_A YJHT; unknown function, 96.6 0.16 5.4E-06 42.2 16.4 140 93-244 22-224 (357)
328 1tl2_A L10, protein (tachylect 96.6 0.15 5.1E-06 38.9 14.1 181 138-332 3-203 (236)
329 4asc_A Kelch repeat and BTB do 96.6 0.24 8.1E-06 40.3 20.8 134 100-246 118-277 (315)
330 1tl2_A L10, protein (tachylect 96.4 0.15 5.3E-06 38.8 13.2 151 127-292 41-210 (236)
331 3a9g_A Putative uncharacterize 95.9 0.6 2.1E-05 38.7 18.2 144 127-277 29-215 (354)
332 2zwa_A Leucine carboxyl methyl 95.9 0.52 1.8E-05 43.2 16.9 195 93-289 400-634 (695)
333 2woz_A Kelch repeat and BTB do 95.9 0.58 2E-05 38.0 18.1 134 100-246 128-287 (318)
334 2woz_A Kelch repeat and BTB do 95.6 0.75 2.6E-05 37.3 22.3 134 101-247 80-232 (318)
335 2g8s_A Glucose/sorbosone dehyd 95.3 1.1 3.6E-05 37.3 23.4 71 259-336 271-349 (353)
336 1cru_A Protein (soluble quinop 95.1 1.4 4.9E-05 37.9 19.4 105 171-278 28-162 (454)
337 2zwa_A Leucine carboxyl methyl 94.9 2.2 7.7E-05 39.0 21.1 198 31-247 398-636 (695)
338 3ott_A Two-component system se 94.4 3.1 0.00011 38.5 31.9 271 22-335 146-444 (758)
339 3das_A Putative oxidoreductase 94.2 2 6.9E-05 35.4 26.6 238 72-327 33-326 (347)
340 2g8s_A Glucose/sorbosone dehyd 94.0 2.3 7.8E-05 35.2 20.8 144 127-276 18-214 (353)
341 3s25_A Hypothetical 7-bladed b 93.9 2.1 7.3E-05 34.5 14.4 161 138-329 24-204 (302)
342 1cru_A Protein (soluble quinop 93.7 3.1 0.00011 35.8 26.0 107 72-188 28-163 (454)
343 2be1_A Serine/threonine-protei 92.9 2.5 8.7E-05 34.7 12.7 109 93-207 13-138 (339)
344 3q6k_A 43.2 kDa salivary prote 89.3 8.7 0.0003 32.1 18.6 171 150-326 124-341 (381)
345 3b7f_A Glycosyl hydrolase, BNR 88.2 10 0.00036 31.6 27.3 154 127-284 177-366 (394)
346 1sqj_A OXG-RCBH, oligoxylogluc 87.8 17 0.0006 33.8 16.6 150 127-280 15-190 (789)
347 2be1_A Serine/threonine-protei 87.5 2 6.7E-05 35.4 7.4 114 139-255 10-138 (339)
348 3das_A Putative oxidoreductase 87.4 11 0.00038 31.0 23.5 145 127-276 32-218 (347)
349 3sbq_A Nitrous-oxide reductase 85.9 1.5 5.1E-05 38.6 6.1 95 239-337 300-406 (638)
350 3s25_A Hypothetical 7-bladed b 82.9 17 0.00057 29.2 20.5 136 133-289 110-254 (302)
351 3sbq_A Nitrous-oxide reductase 82.6 7.7 0.00026 34.3 9.0 73 214-289 323-407 (638)
352 3qhy_B Beta-lactamase inhibito 80.5 20 0.00068 28.4 25.5 219 71-335 24-242 (282)
353 1suu_A DNA gyrase subunit A; t 77.6 26 0.0009 28.2 19.9 193 138-336 7-228 (312)
354 3b7f_A Glycosyl hydrolase, BNR 76.3 32 0.0011 28.6 21.4 140 139-283 22-201 (394)
355 3qhy_B Beta-lactamase inhibito 74.9 29 0.001 27.4 25.0 239 23-320 25-265 (282)
356 4hvt_A Ritya.17583.B, post-pro 70.6 65 0.0022 29.5 18.4 196 130-332 132-372 (711)
357 2wg3_C Hedgehog-interacting pr 69.4 54 0.0019 28.2 14.7 108 171-279 15-158 (463)
358 4gq2_M Nucleoporin NUP120; bet 61.9 1.1E+02 0.0039 29.1 14.5 31 72-110 237-268 (950)
359 4gq2_M Nucleoporin NUP120; bet 61.7 1.1E+02 0.0039 29.1 14.6 36 215-253 237-272 (950)
360 3no0_A DNA gyrase subunit A; D 58.4 66 0.0023 25.3 21.5 198 127-334 24-239 (276)
361 1suu_A DNA gyrase subunit A; t 56.0 78 0.0027 25.4 15.2 150 179-336 7-178 (312)
362 2cn3_A Xyloglucanase, beta-1,4 55.1 1.3E+02 0.0044 27.7 19.2 202 127-336 23-278 (737)
363 3f7f_A Nucleoporin NUP120; nuc 54.8 18 0.00061 33.1 5.3 36 128-166 223-258 (729)
364 3uc1_A DNA gyrase subunit A; D 48.2 1.1E+02 0.0037 24.8 18.5 191 139-335 3-224 (327)
365 4fhn_B Nucleoporin NUP120; pro 48.0 12 0.00041 36.5 3.4 37 128-165 239-275 (1139)
366 3q6k_A 43.2 kDa salivary prote 45.7 1.3E+02 0.0045 25.0 17.7 176 100-278 124-342 (381)
367 1zvt_A Topoisomerase IV subuni 45.2 1.1E+02 0.0036 23.8 13.6 146 181-336 3-160 (256)
368 3a0f_A Xyloglucanase; beta-pro 43.3 2E+02 0.0069 26.5 18.3 151 127-281 21-203 (763)
369 4fhn_B Nucleoporin NUP120; pro 42.3 89 0.003 30.6 8.4 36 215-253 239-274 (1139)
370 3zwu_A Alkaline phosphatase PH 35.9 1.1E+02 0.0039 27.2 7.4 59 261-326 478-548 (592)
371 3no0_A DNA gyrase subunit A; D 33.8 1.7E+02 0.0059 22.9 19.9 182 93-289 38-245 (276)
372 3kvp_A Uncharacterized protein 33.5 72 0.0025 18.7 3.8 26 31-61 29-54 (72)
373 3kci_A Probable E3 ubiquitin-p 31.6 2.2E+02 0.0075 23.5 20.9 196 128-335 54-289 (389)
374 3f7f_A Nucleoporin NUP120; nuc 31.1 58 0.002 29.8 4.7 28 179-206 230-257 (729)
375 3zwu_A Alkaline phosphatase PH 30.1 1.8E+02 0.006 26.0 7.6 58 217-277 479-548 (592)
376 3uc1_A DNA gyrase subunit A; D 29.4 2.3E+02 0.0077 22.9 22.9 201 127-335 42-275 (327)
377 1q47_A Semaphorin 3A; beta pro 28.3 1.3E+02 0.0045 26.1 6.4 62 273-334 423-487 (495)
378 4a9v_A PHOX; hydrolase, beta-p 25.9 3.3E+02 0.011 24.3 8.4 61 215-277 477-549 (592)
379 1q47_A Semaphorin 3A; beta pro 24.1 2.2E+02 0.0075 24.7 7.0 57 228-285 423-487 (495)
380 1sqj_A OXG-RCBH, oligoxylogluc 23.8 4.4E+02 0.015 24.4 23.6 154 70-237 14-193 (789)
381 3mvd_K Regulator of chromosome 22.9 3.3E+02 0.011 22.7 26.1 153 127-289 179-373 (423)
382 4a9v_A PHOX; hydrolase, beta-p 21.1 4.3E+02 0.015 23.6 8.2 62 171-235 477-551 (592)
383 3ol2_B Plexin-B1; beta-propell 20.8 1.9E+02 0.0063 25.4 5.9 59 273-334 402-461 (528)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.3e-48 Score=337.92 Aligned_cols=282 Identities=16% Similarity=0.260 Sum_probs=250.4
Q ss_pred eeeCCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEE
Q 038533 17 THESPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLL 94 (337)
Q Consensus 17 ~~~~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l 94 (337)
...|..+|++++|+ +++||+|+. ||.|+||++......... .+|.+.|.+++|+|++. +|
T Consensus 104 l~gh~~~V~~~~~~p~~~~l~s~s~----Dg~i~vwd~~~~~~~~~l-----~~h~~~V~~v~~~~~~~---------~l 165 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVFSVMVSASE----DATIKVWDYETGDFERTL-----KGHTDSVQDISFDHSGK---------LL 165 (410)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEES----SSCEEEEETTTCCCCEEE-----CCCSSCEEEEEECTTSS---------EE
T ss_pred ecccCCcEEEEEEcCCCCEEEEEeC----CCeEEEEECCCCcEEEEE-----eccCCcEEEEEEcCCCC---------EE
Confidence 34578999999999 899999997 999999998866544433 68999999999999998 88
Q ss_pred EEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCce
Q 038533 95 ASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEV 172 (337)
Q Consensus 95 ~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v 172 (337)
++|+ | +|++||+.+. +++..+.+|. ..|.+++|+| ++++|++|+.|+.|++||+++++++..+.+|...|
T Consensus 166 ~sgs~D~~i~iwd~~~~--~~~~~~~~h~-----~~V~~v~~~p-~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v 237 (410)
T 1vyh_C 166 ASCSADMTIKLWDFQGF--ECIRTMHGHD-----HNVSSVSIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWV 237 (410)
T ss_dssp EEEETTSCCCEEETTSS--CEEECCCCCS-----SCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCE
T ss_pred EEEeCCCeEEEEeCCCC--ceeEEEcCCC-----CCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccE
Confidence 8887 5 9999999887 6788888988 9999999999 99999999999999999999999999999999999
Q ss_pred eEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCC-------------------CcEEEEE
Q 038533 173 YDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQD-------------------LRYMATI 232 (337)
Q Consensus 173 ~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------------------~~~l~~~ 232 (337)
.+++++ ++.++++|+.|+.|++||+++.+....+ ..|...+.+++|+|.. +.+|+++
T Consensus 238 ~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~---~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sg 314 (410)
T 1vyh_C 238 RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL---REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314 (410)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE---CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEE
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEe---cCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEE
Confidence 999999 7999999999999999999988754433 3477899999999831 6689999
Q ss_pred EecCCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCcee
Q 038533 233 LMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEIN 312 (337)
Q Consensus 233 ~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 312 (337)
+.|+. |++||+++ +.++..+.+|...|++++|+|+++ +|++|+.||.|++||+. + +.....+.+|...|+
T Consensus 315 s~D~~-i~iwd~~~-~~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~D~~i~vwd~~--~-----~~~~~~~~~h~~~v~ 384 (410)
T 1vyh_C 315 SRDKT-IKMWDVST-GMCLMTLVGHDNWVRGVLFHSGGK-FILSCADDKTLRVWDYK--N-----KRCMKTLNAHEHFVT 384 (410)
T ss_dssp ETTSE-EEEEETTT-TEEEEEEECCSSCEEEEEECSSSS-CEEEEETTTEEEEECCT--T-----SCCCEEEECCSSCEE
T ss_pred eCCCe-EEEEECCC-CceEEEEECCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECC--C-----CceEEEEcCCCCcEE
Confidence 99998 99999998 667888999999999999999999 99999999999999998 3 223457778999999
Q ss_pred EEEEccCCCceEEEEcCCcEEEEeC
Q 038533 313 QLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 313 ~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
+++|+|++++|++++.|+.|+||++
T Consensus 385 ~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 385 SLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp EEEECSSSSCEEEEETTSEEEEEC-
T ss_pred EEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 9999999999999999999999985
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.2e-48 Score=325.47 Aligned_cols=281 Identities=17% Similarity=0.326 Sum_probs=248.2
Q ss_pred eCCCceeEEEEe------cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCcc
Q 038533 19 ESPYPLYAMAVC------GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRH 92 (337)
Q Consensus 19 ~~~~~v~~~~~s------~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~ 92 (337)
.|.++|++++|+ +++||+|+. |+.|+||++......... .+ .+|...|.+++|++++.
T Consensus 30 ~H~~~V~~v~~~~~~~~~~~~l~tgs~----D~~v~vW~~~~~~~~~~~--~l-~gh~~~v~~~~~~~~~~--------- 93 (321)
T 3ow8_A 30 AHDDAIWSVAWGTNKKENSETVVTGSL----DDLVKVWKWRDERLDLQW--SL-EGHQLGVVSVDISHTLP--------- 93 (321)
T ss_dssp SSSSCEEEEEEC-------CEEEEEET----TSCEEEEEEETTEEEEEE--EE-CCCSSCEEEEEECSSSS---------
T ss_pred cCCCcEEEEEEecCCCCCCCEEEEEcC----CCCEEEEECCCCCeeeee--ee-ccCCCCEEEEEECCCCC---------
Confidence 478999999997 458999997 999999999865543332 22 78999999999999998
Q ss_pred EEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCC
Q 038533 93 LLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDK 170 (337)
Q Consensus 93 ~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~ 170 (337)
++++++ | +|++||+.++ +.+..+..+. ..+.+++|+| ++++|++|+.||.|++||+++++....+..|..
T Consensus 94 ~l~s~s~D~~i~lWd~~~~--~~~~~~~~~~-----~~~~~~~~sp-dg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~ 165 (321)
T 3ow8_A 94 IAASSSLDAHIRLWDLENG--KQIKSIDAGP-----VDAWTLAFSP-DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGK 165 (321)
T ss_dssp EEEEEETTSEEEEEETTTT--EEEEEEECCT-----TCCCCEEECT-TSSEEEEECTTSEEEEEETTTCSEEEEEECSSS
T ss_pred EEEEEeCCCcEEEEECCCC--CEEEEEeCCC-----ccEEEEEECC-CCCEEEEEcCCCcEEEEEcCCCceeEEecCCCc
Confidence 888887 6 9999999998 6777888777 7899999999 999999999999999999999998888888999
Q ss_pred ceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCC
Q 038533 171 EVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTL 249 (337)
Q Consensus 171 ~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~ 249 (337)
.|.+++|+ ++++|++|+.||.|++||+++++....+ ..|..+|.+++|+| ++.+|++++.|+. |++||++. ..
T Consensus 166 ~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~---~~h~~~v~~l~~sp-d~~~l~s~s~dg~-i~iwd~~~-~~ 239 (321)
T 3ow8_A 166 FILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTL---EGHAMPIRSLTFSP-DSQLLVTASDDGY-IKIYDVQH-AN 239 (321)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE---CCCSSCCCEEEECT-TSCEEEEECTTSC-EEEEETTT-CC
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEE---cccCCceeEEEEcC-CCCEEEEEcCCCe-EEEEECCC-cc
Confidence 99999999 7999999999999999999988744333 34778999999999 9999999999999 99999998 56
Q ss_pred CeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEcC
Q 038533 250 PVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFS 329 (337)
Q Consensus 250 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 329 (337)
.+..+.+|...|.+++|+|+++ +|++++.|+.|++||+. + +.....+.+|...|.+++|+|+++.|++++.|
T Consensus 240 ~~~~~~~h~~~v~~~~~sp~~~-~l~s~s~D~~v~iwd~~--~-----~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d 311 (321)
T 3ow8_A 240 LAGTLSGHASWVLNVAFCPDDT-HFVSSSSDKSVKVWDVG--T-----RTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDD 311 (321)
T ss_dssp EEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETT--T-----TEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eeEEEcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEeCC--C-----CEEEEEEcCCCCcEEEEEECCCCCEEEEEeCC
Confidence 6788999999999999999999 99999999999999998 3 22344677899999999999999999999999
Q ss_pred CcEEEEeC
Q 038533 330 NKMQLLKV 337 (337)
Q Consensus 330 ~~i~iw~l 337 (337)
+.|+||++
T Consensus 312 ~~i~vwd~ 319 (321)
T 3ow8_A 312 QEIHIYDC 319 (321)
T ss_dssp CCEEEEEC
T ss_pred CeEEEEeC
Confidence 99999985
No 3
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.1e-48 Score=329.71 Aligned_cols=287 Identities=18% Similarity=0.215 Sum_probs=231.5
Q ss_pred CCCceeEEEEe--cceEEEeeeeccCcceEEEEEec-----CCCc-ceecCCCcCCCCCCCCeEEEecCCCCcccCcCCc
Q 038533 20 SPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFE-----PESL-SIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNR 91 (337)
Q Consensus 20 ~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~-----~~~~-~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~ 91 (337)
++..|.+++|+ |++|++++ |+++++|+.. .... ...........+...|.+++|+|++.
T Consensus 29 ~~~~v~~~~fs~dG~~l~~~s-----d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~-------- 95 (344)
T 4gqb_B 29 MERQLEAARYRSDGALLLGAS-----SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGERG-------- 95 (344)
T ss_dssp CCSEEEEEEECTTSCEEEEEE-----CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTTE--------
T ss_pred ccCCEEEEEECCCCCEEEEEe-----CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCCe--------
Confidence 45679999999 88888777 7777777532 1111 11110011235677899999999975
Q ss_pred cEEEEeCC-eEEEEecCCCCccc--eeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhcc
Q 038533 92 HLLASSGD-FLRLWDVGDSSIEP--VAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAH 168 (337)
Q Consensus 92 ~~l~~~~~-~v~vw~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~ 168 (337)
+++++.| +|+|||+.+++... ...+.+|. ..|++++|+| ++++|++|+.|+.|++||+++++.+..+.+|
T Consensus 96 -l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~-----~~V~~v~~sp-dg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h 168 (344)
T 4gqb_B 96 -ILVASDSGAVELWELDENETLIVSKFCKYEHD-----DIVSTVSVLS-SGTQAVSGSKDICIKVWDLAQQVVLSSYRAH 168 (344)
T ss_dssp -EEEEETTSEEEEEEECTTSSCEEEEEEEECCS-----SCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred -EEEEECCCEEEEEeccCCCceeEeeccccCCC-----CCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCc
Confidence 6665667 99999999885322 23345787 9999999999 9999999999999999999999999999999
Q ss_pred CCceeEEEeC-CC-cEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCC
Q 038533 169 DKEVYDICWG-EA-RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRS 246 (337)
Q Consensus 169 ~~~v~~~~~~-~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~ 246 (337)
...|++++|+ ++ .+|++++.|++|++||+++++....+... .+...+.+++|+|.++++|++++.|+. |++||+++
T Consensus 169 ~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~l~sg~~dg~-v~~wd~~~ 246 (344)
T 4gqb_B 169 AAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCS-APGYLPTSLAWHPQQSEVFVFGDENGT-VSLVDTKS 246 (344)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC-----CCCEEEEEECSSCTTEEEEEETTSE-EEEEESCC
T ss_pred CCceEEEEecCCCCCceeeeccccccccccccccceeeeeecc-eeeccceeeeecCCCCcceEEeccCCc-EEEEECCC
Confidence 9999999999 44 57899999999999999998865554322 355678999999977788999999998 99999998
Q ss_pred CCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceE-E
Q 038533 247 PTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWL-A 325 (337)
Q Consensus 247 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~ 325 (337)
.+++..+.+|...|++++|+|++..+|++|+.|++|+|||++.+ ....+.+|...|++++|+|+++.++ +
T Consensus 247 -~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~--------~~~~~~~H~~~V~~v~~sp~~~~llas 317 (344)
T 4gqb_B 247 -TSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS--------ELFRSQAHRDFVRDATWSPLNHSLLTT 317 (344)
T ss_dssp ---CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC--------EEEEECCCSSCEEEEEECSSSTTEEEE
T ss_pred -CcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC--------cEEEEcCCCCCEEEEEEeCCCCeEEEE
Confidence 66788999999999999999998658999999999999999822 2556788999999999999998765 6
Q ss_pred EEcCCcEEEEeC
Q 038533 326 IAFSNKMQLLKV 337 (337)
Q Consensus 326 ~~~d~~i~iw~l 337 (337)
++.|++|++|++
T Consensus 318 ~s~D~~v~~w~v 329 (344)
T 4gqb_B 318 VGWDHQVVHHVV 329 (344)
T ss_dssp EETTSCEEEEEC
T ss_pred EcCCCeEEEEEC
Confidence 789999999986
No 4
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.7e-48 Score=331.01 Aligned_cols=292 Identities=15% Similarity=0.211 Sum_probs=234.7
Q ss_pred eCCCceeEEEEe--cceEEEeeeecc--CcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEE
Q 038533 19 ESPYPLYAMAVC--GQRIAVGSFIED--YTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLL 94 (337)
Q Consensus 19 ~~~~~v~~~~~s--~~~la~g~~~~~--~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l 94 (337)
.|+..|++++|+ |++||+|+.+.. .|+.|++|+........... ....+|...|.+++|+|++. ++
T Consensus 40 ~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~-~~~~~~~~~V~~~~~s~d~~---------~l 109 (357)
T 4g56_B 40 CMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLC-TAGVQTEAGVTDVAWVSEKG---------IL 109 (357)
T ss_dssp CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGC-SEEEECSSCEEEEEEETTTE---------EE
T ss_pred cccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEe-cccCCCCCCEEEEEEcCCCC---------EE
Confidence 478899999999 999999984111 15678887654432221111 11257889999999999997 88
Q ss_pred EEeCC-eEEEEecCCCCccce--eeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCc
Q 038533 95 ASSGD-FLRLWDVGDSSIEPV--AVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKE 171 (337)
Q Consensus 95 ~~~~~-~v~vw~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~ 171 (337)
+++.+ +|+|||+.+++.... ....+|. ..|++++|+| ++++|++|+.|+.|++||+++++.+..+.+|...
T Consensus 110 ~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~-----~~V~~v~~sp-dg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~ 183 (357)
T 4g56_B 110 VASDSGAVELWEILEKESLLVNKFAKYEHD-----DIVKTLSVFS-DGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSE 183 (357)
T ss_dssp EEETTSCEEEC--------CCCCEEECCCS-----SCEEEEEECS-SSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred EEECCCEEEEeeccccceeEEEeeccCCCC-----CCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCC
Confidence 88877 999999988753322 2344676 8999999999 9999999999999999999999999999999999
Q ss_pred eeEEEeC-C-CcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCC
Q 038533 172 VYDICWG-E-ARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTL 249 (337)
Q Consensus 172 v~~~~~~-~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~ 249 (337)
|++++|+ + ..++++++.||.|++||+++++....... ..+...+.+++|+|..+.+|++++.|+. |++||+++ .+
T Consensus 184 v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~-~~~~~~v~~v~~sp~~~~~la~g~~d~~-i~~wd~~~-~~ 260 (357)
T 4g56_B 184 VNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDF-CASDTIPTSVTWHPEKDDTFACGDETGN-VSLVNIKN-PD 260 (357)
T ss_dssp EEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCC-TTCCSCEEEEEECTTSTTEEEEEESSSC-EEEEESSC-GG
T ss_pred EEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeee-ccccccccchhhhhcccceEEEeecccc-eeEEECCC-Cc
Confidence 9999999 4 45899999999999999998875544332 2466789999999966788999999998 99999998 56
Q ss_pred CeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEcc-CCCceEEEEc
Q 038533 250 PVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSP-AQPDWLAIAF 328 (337)
Q Consensus 250 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~ 328 (337)
++..+.+|...|++++|+|++..+|++|+.|++|+|||++.+ +.....+|...|++++|+| ++..|++++.
T Consensus 261 ~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~--------~~~~~~~H~~~V~~vafsP~d~~~l~s~s~ 332 (357)
T 4g56_B 261 SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS--------EVFRDLSHRDFVTGVAWSPLDHSKFTTVGW 332 (357)
T ss_dssp GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC--------EEEEECCCSSCEEEEEECSSSTTEEEEEET
T ss_pred EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC--------cEeEECCCCCCEEEEEEeCCCCCEEEEEcC
Confidence 788899999999999999998658999999999999999822 2456668999999999999 7888889999
Q ss_pred CCcEEEEeC
Q 038533 329 SNKMQLLKV 337 (337)
Q Consensus 329 d~~i~iw~l 337 (337)
|++|++|++
T Consensus 333 Dg~v~iW~~ 341 (357)
T 4g56_B 333 DHKVLHHHL 341 (357)
T ss_dssp TSCEEEEEC
T ss_pred CCeEEEEEC
Confidence 999999986
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=5.6e-46 Score=308.84 Aligned_cols=285 Identities=17% Similarity=0.213 Sum_probs=240.8
Q ss_pred eeee-eCCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCc
Q 038533 15 SVTH-ESPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNR 91 (337)
Q Consensus 15 ~~~~-~~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~ 91 (337)
..++ .|.++|++++|+ +++||+|+. ||.|+||++......... ..|..+|.+++|+|+++
T Consensus 6 ~~~~~~h~~~V~~~~fsp~~~~l~s~~~----dg~v~lWd~~~~~~~~~~-----~~~~~~v~~~~~~~~~~-------- 68 (304)
T 2ynn_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLY----SGRVELWNYETQVEVRSI-----QVTETPVRAGKFIARKN-------- 68 (304)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEET----TSEEEEEETTTTEEEEEE-----ECCSSCEEEEEEEGGGT--------
T ss_pred EEeecCCCCceEEEEECCCCCEEEEEcC----CCcEEEEECCCCceeEEe-----eccCCcEEEEEEeCCCC--------
Confidence 3444 468899999999 899999997 999999998765433332 57889999999999998
Q ss_pred cEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCcc-chhhhhcc
Q 038533 92 HLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGV-VETQLIAH 168 (337)
Q Consensus 92 ~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~-~~~~~~~~ 168 (337)
+|++|+ | .|++||+.++ +.+..+.+|. ..|.+++|+| ++++|++|+.|+.|++||++++. ....+.+|
T Consensus 69 -~l~s~s~d~~i~vwd~~~~--~~~~~~~~h~-----~~v~~~~~~~-~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h 139 (304)
T 2ynn_A 69 -WIIVGSDDFRIRVFNYNTG--EKVVDFEAHP-----DYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGH 139 (304)
T ss_dssp -EEEEEETTSEEEEEETTTC--CEEEEEECCS-----SCEEEEEECS-SSSEEEEEETTSCEEEEEGGGTTEEEEEECCC
T ss_pred -EEEEECCCCEEEEEECCCC--cEEEEEeCCC-----CcEEEEEEcC-CCCEEEEECCCCeEEEEECCCCcchhhhhccc
Confidence 888887 5 9999999998 6788899998 9999999999 99999999999999999998874 45667899
Q ss_pred CCceeEEEeCC--CcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecC-CCcEEEEEEecCCEEEEEECC
Q 038533 169 DKEVYDICWGE--ARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQ-DLRYMATILMDSNKVVILDIR 245 (337)
Q Consensus 169 ~~~v~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~d~~~i~i~d~~ 245 (337)
...|.+++|+| +..|++|+.|++|++||++........... +...+..+.|+|. ++.+|++++.|+. |++||++
T Consensus 140 ~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~s~s~D~~-i~iWd~~ 216 (304)
T 2ynn_A 140 EHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTG--QERGVNYVDYYPLPDKPYMITASDDLT-IKIWDYQ 216 (304)
T ss_dssp CSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECC--CTTCEEEEEECCSTTCCEEEEEETTSE-EEEEETT
T ss_pred CCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccC--CcCcEEEEEEEEcCCCCEEEEEcCCCe-EEEEeCC
Confidence 99999999993 679999999999999999887755444433 5578899999873 5679999999998 9999999
Q ss_pred CCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCc-eE
Q 038533 246 SPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPD-WL 324 (337)
Q Consensus 246 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~ 324 (337)
+ .+++..+.+|...|.+++|+|+++ +|++|+.||.|++||+. +. .....+..|...+.+++|+|++.. ++
T Consensus 217 ~-~~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~Dg~i~iWd~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (304)
T 2ynn_A 217 T-KSCVATLEGHMSNVSFAVFHPTLP-IIISGSEDGTLKIWNSS--TY-----KVEKTLNVGLERSWCIATHPTGRKNYI 287 (304)
T ss_dssp T-TEEEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETT--TC-----CEEEEECCSSSSEEEEEECTTCGGGCE
T ss_pred C-CccceeeCCCCCCEEEEEECCCCC-EEEEEcCCCeEEEEECC--CC-----ceeeeccCCCccEEEEEECCCCCceEE
Confidence 8 667889999999999999999999 99999999999999998 31 123456678889999999998864 46
Q ss_pred EEEcCCcEEEEeC
Q 038533 325 AIAFSNKMQLLKV 337 (337)
Q Consensus 325 ~~~~d~~i~iw~l 337 (337)
+++.|+.+.+|++
T Consensus 288 asg~~~g~~~~~~ 300 (304)
T 2ynn_A 288 ASGFDNGFTVLSL 300 (304)
T ss_dssp EEEETTEEEEEEC
T ss_pred EEecCCceEEEEe
Confidence 6666777777764
No 6
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=7.5e-46 Score=312.92 Aligned_cols=279 Identities=15% Similarity=0.225 Sum_probs=239.9
Q ss_pred eCCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEE
Q 038533 19 ESPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLAS 96 (337)
Q Consensus 19 ~~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~ 96 (337)
.|..+|++++|+ +++|++|+. ||.|+||+.......... ..|...|.+++|+|++. +|++
T Consensus 53 gH~~~v~~~~~s~d~~~l~s~s~----Dg~v~iWd~~~~~~~~~~-----~~~~~~v~~~~~s~~~~---------~l~s 114 (340)
T 1got_B 53 GHLAKIYAMHWGTDSRLLLSASQ----DGKLIIWDSYTTNKVHAI-----PLRSSWVMTCAYAPSGN---------YVAC 114 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEET----TTEEEEEETTTCCEEEEE-----ECSSSCEEEEEECTTSS---------EEEE
T ss_pred CCCCceEEEEECCCCCEEEEEeC----CCcEEEEECCCCCcceEe-----ecCCccEEEEEECCCCC---------EEEE
Confidence 468999999999 899999997 999999998765544333 57889999999999998 8888
Q ss_pred eC-C-eEEEEecCCCC--ccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCce
Q 038533 97 SG-D-FLRLWDVGDSS--IEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEV 172 (337)
Q Consensus 97 ~~-~-~v~vw~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v 172 (337)
++ | .|++|++.+.+ ......+.+|. ..|.++.|++ ++ .+++++.|+.|++||+++++.+..+.+|...|
T Consensus 115 ~~~d~~v~iw~~~~~~~~~~~~~~~~~h~-----~~v~~~~~~~-~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v 187 (340)
T 1got_B 115 GGLDNICSIYNLKTREGNVRVSRELAGHT-----GYLSCCRFLD-DN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDV 187 (340)
T ss_dssp EETTCEEEEEETTTCSBSCEEEEEEECCS-----SCEEEEEEEE-TT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred EeCCCeEEEEECccCCCcceeEEEecCCC-----ccEEEEEECC-CC-cEEEEECCCcEEEEECCCCcEEEEEcCCCCce
Confidence 87 5 99999998763 24556778888 9999999987 54 58999999999999999999999999999999
Q ss_pred eEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCe
Q 038533 173 YDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPV 251 (337)
Q Consensus 173 ~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~ 251 (337)
.+++|+ +++++++|+.|+.|++||++++.....+ ..|...|.+++|+| ++++|++++.|+. |++||++. ...+
T Consensus 188 ~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~---~~h~~~v~~v~~~p-~~~~l~s~s~d~~-v~iwd~~~-~~~~ 261 (340)
T 1got_B 188 MSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF---TGHESDINAICFFP-NGNAFATGSDDAT-CRLFDLRA-DQEL 261 (340)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEE---CCCSSCEEEEEECT-TSSEEEEEETTSC-EEEEETTT-TEEE
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEE---cCCcCCEEEEEEcC-CCCEEEEEcCCCc-EEEEECCC-CcEE
Confidence 999999 7889999999999999999988744433 34778999999999 9999999999999 99999997 4444
Q ss_pred EEee--cccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEcC
Q 038533 252 AELE--RHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFS 329 (337)
Q Consensus 252 ~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 329 (337)
..+. .+...|.+++|+|+++ +|++|+.||.|++||+. + +.....+.+|..+|.+++|+|++..|++++.|
T Consensus 262 ~~~~~~~~~~~v~~~~~s~~g~-~l~~g~~d~~i~vwd~~--~-----~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D 333 (340)
T 1got_B 262 MTYSHDNIICGITSVSFSKSGR-LLLAGYDDFNCNVWDAL--K-----ADRAGVLAGHDNRVSCLGVTDDGMAVATGSWD 333 (340)
T ss_dssp EEECCTTCCSCEEEEEECTTSS-EEEEEETTSEEEEEETT--T-----CCEEEEEECCSSCEEEEEECTTSSCEEEEETT
T ss_pred EEEccCCcccceEEEEECCCCC-EEEEECCCCeEEEEEcc--c-----CcEeeEeecCCCcEEEEEEcCCCCEEEEEcCC
Confidence 4443 2334799999999999 99999999999999998 3 12244677899999999999999999999999
Q ss_pred CcEEEEe
Q 038533 330 NKMQLLK 336 (337)
Q Consensus 330 ~~i~iw~ 336 (337)
+.|+||+
T Consensus 334 ~~i~iWd 340 (340)
T 1got_B 334 SFLKIWN 340 (340)
T ss_dssp SCEEEEC
T ss_pred ccEEecC
Confidence 9999996
No 7
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=6.2e-46 Score=314.02 Aligned_cols=295 Identities=19% Similarity=0.299 Sum_probs=239.1
Q ss_pred eeee-eCCC-ceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCC
Q 038533 15 SVTH-ESPY-PLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSN 90 (337)
Q Consensus 15 ~~~~-~~~~-~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~ 90 (337)
+.++ .|.. +|++++|+ +++||+|+. |+.|+||+++........ .+..+|...|.+++|+|++.
T Consensus 8 ~~~~~~h~~~~v~~l~~sp~g~~las~~~----D~~i~iw~~~~~~~~~~~--~~~~~h~~~v~~~~~sp~g~------- 74 (345)
T 3fm0_A 8 LGRVPAHPDSRCWFLAWNPAGTLLASCGG----DRRIRIWGTEGDSWICKS--VLSEGHQRTVRKVAWSPCGN------- 74 (345)
T ss_dssp EEEECCSTTSCEEEEEECTTSSCEEEEET----TSCEEEEEEETTEEEEEE--EECSSCSSCEEEEEECTTSS-------
T ss_pred eeeecCCCCCcEEEEEECCCCCEEEEEcC----CCeEEEEEcCCCcceeee--eeccccCCcEEEEEECCCCC-------
Confidence 3444 3555 89999999 999999997 999999999865432221 22368999999999999998
Q ss_pred ccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCcc---chhhh
Q 038533 91 RHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGV---VETQL 165 (337)
Q Consensus 91 ~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~---~~~~~ 165 (337)
+|++++ | ++++|++..+..++...+.+|. ..|.+++|+| ++++|++|+.|+.|++||++++. .+..+
T Consensus 75 --~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~-----~~v~~v~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~ 146 (345)
T 3fm0_A 75 --YLASASFDATTCIWKKNQDDFECVTTLEGHE-----NEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECVSVL 146 (345)
T ss_dssp --EEEEEETTSCEEEEEECCC-EEEEEEECCCS-----SCEEEEEECT-TSSEEEEEETTSCEEEEEECTTSCEEEEEEE
T ss_pred --EEEEEECCCcEEEEEccCCCeEEEEEccCCC-----CCceEEEEeC-CCCEEEEEECCCeEEEEECCCCCCeEEEEEe
Confidence 888887 6 9999999988666788899998 9999999999 99999999999999999998764 35567
Q ss_pred hccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEEC
Q 038533 166 IAHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDI 244 (337)
Q Consensus 166 ~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~ 244 (337)
.+|...|.+++|+ ++++|++++.|+.|++||.+..+... ......|...|.+++|+| ++++|++++.|+. |++||.
T Consensus 147 ~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~-~~~~~~h~~~v~~l~~sp-~g~~l~s~s~D~~-v~iW~~ 223 (345)
T 3fm0_A 147 NSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVC-CATLEGHESTVWSLAFDP-SGQRLASCSDDRT-VRIWRQ 223 (345)
T ss_dssp CCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEE-EEEECCCSSCEEEEEECT-TSSEEEEEETTSC-EEEEEE
T ss_pred cCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEE-EEEecCCCCceEEEEECC-CCCEEEEEeCCCe-EEEecc
Confidence 7899999999999 78999999999999999998765322 222335789999999999 9999999999999 999997
Q ss_pred CCCCC--------------CeEEeec-ccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCce-----ee
Q 038533 245 RSPTL--------------PVAELER-HRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPM-----SM 304 (337)
Q Consensus 245 ~~~~~--------------~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-----~~ 304 (337)
..+.. .+..+.+ |...|.+++|+|++. .|++++.|+.|++|+........ .... ..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~i~vw~~~~~~~~~---~~~~~~~~~~~ 299 (345)
T 3fm0_A 224 YLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTG-ALATACGDDAIRVFQEDPNSDPQ---QPTFSLTAHLH 299 (345)
T ss_dssp ECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTC-CEEEEETTSCEEEEEECTTSCTT---SCCEEEEEEET
T ss_pred ccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCC-EEEEEeCCCeEEEEEeCCCCCcc---eeeEEEEeeec
Confidence 54321 1223333 788999999999999 99999999999999998322111 1111 12
Q ss_pred eeCCCceeEEEEccCCC-ceEEEEcCCcEEEEeC
Q 038533 305 YSAGSEINQLQWSPAQP-DWLAIAFSNKMQLLKV 337 (337)
Q Consensus 305 ~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~l 337 (337)
.+|...|++++|+|+++ .|++++.||.|++|++
T Consensus 300 ~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~ 333 (345)
T 3fm0_A 300 QAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKY 333 (345)
T ss_dssp TSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEE
T ss_pred ccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEe
Confidence 36899999999999985 6778899999999984
No 8
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.7e-45 Score=309.53 Aligned_cols=280 Identities=15% Similarity=0.213 Sum_probs=240.1
Q ss_pred eCCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEE
Q 038533 19 ESPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLAS 96 (337)
Q Consensus 19 ~~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~ 96 (337)
.|..+|++++|+ +++||+|+. |+.|+||+.......... ..|...|.+++|+|++. +|++
T Consensus 62 gH~~~V~~~~~s~d~~~l~s~s~----Dg~v~vWd~~~~~~~~~~-----~~~~~~v~~~~~sp~g~---------~las 123 (354)
T 2pbi_B 62 GHGNKVLCMDWCKDKRRIVSSSQ----DGKVIVWDSFTTNKEHAV-----TMPCTWVMACAYAPSGC---------AIAC 123 (354)
T ss_dssp CCSSCEEEEEECTTSSEEEEEET----TSEEEEEETTTCCEEEEE-----ECSSSCCCEEEECTTSS---------EEEE
T ss_pred CCCCeEEEEEECCCCCEEEEEeC----CCeEEEEECCCCCcceEE-----ecCCCCEEEEEECCCCC---------EEEE
Confidence 478999999999 899999997 999999997765544433 46788899999999999 9999
Q ss_pred eC-C-eEEEEecCCCC----ccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCC
Q 038533 97 SG-D-FLRLWDVGDSS----IEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDK 170 (337)
Q Consensus 97 ~~-~-~v~vw~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~ 170 (337)
++ | .+++|++.... ......+.+|. ..|.+++|+| ++..|++++.|++|++||+++++.+..+.+|..
T Consensus 124 g~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~-----~~v~~~~~~~-~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~ 197 (354)
T 2pbi_B 124 GGLDNKCSVYPLTFDKNENMAAKKKSVAMHT-----NYLSACSFTN-SDMQILTASGDGTCALWDVESGQLLQSFHGHGA 197 (354)
T ss_dssp ESTTSEEEEEECCCCTTCCSGGGCEEEEECS-----SCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred eeCCCCEEEEEEeccccccccccceeeeccC-----CcEEEEEEeC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCC
Confidence 88 5 99999987542 24456677787 9999999999 899999999999999999999999999999999
Q ss_pred ceeEEEeC---CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCC
Q 038533 171 EVYDICWG---EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSP 247 (337)
Q Consensus 171 ~v~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~ 247 (337)
.|.+++|+ ++++|++|+.||.|++||+++++....+ ..|...|.+++|+| ++.+|++++.|+. |++||++.
T Consensus 198 ~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~---~~h~~~v~~v~~~p-~~~~l~s~s~D~~-v~lwd~~~- 271 (354)
T 2pbi_B 198 DVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAF---ETHESDVNSVRYYP-SGDAFASGSDDAT-CRLYDLRA- 271 (354)
T ss_dssp CEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEE---CCCSSCEEEEEECT-TSSEEEEEETTSC-EEEEETTT-
T ss_pred CeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEe---cCCCCCeEEEEEeC-CCCEEEEEeCCCe-EEEEECCC-
Confidence 99999997 2589999999999999999998754433 34778999999999 9999999999999 99999997
Q ss_pred CCCeEEeecc--cceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEE
Q 038533 248 TLPVAELERH--RACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLA 325 (337)
Q Consensus 248 ~~~~~~~~~~--~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 325 (337)
...+..+..+ ...+.+++|+|++. +|++|+.|+.|++||+. + +.....+.+|...|.+++|+|++++|++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~~g~~d~~i~vwd~~--~-----~~~~~~l~~h~~~v~~l~~spdg~~l~s 343 (354)
T 2pbi_B 272 DREVAIYSKESIIFGASSVDFSLSGR-LLFAGYNDYTINVWDVL--K-----GSRVSILFGHENRVSTLRVSPDGTAFCS 343 (354)
T ss_dssp TEEEEEECCTTCCSCEEEEEECTTSS-EEEEEETTSCEEEEETT--T-----CSEEEEECCCSSCEEEEEECTTSSCEEE
T ss_pred CcEEEEEcCCCcccceeEEEEeCCCC-EEEEEECCCcEEEEECC--C-----CceEEEEECCCCcEEEEEECCCCCEEEE
Confidence 4344444432 34789999999999 99999999999999998 3 2234467789999999999999999999
Q ss_pred EEcCCcEEEEe
Q 038533 326 IAFSNKMQLLK 336 (337)
Q Consensus 326 ~~~d~~i~iw~ 336 (337)
++.|+.|+||+
T Consensus 344 gs~D~~v~vW~ 354 (354)
T 2pbi_B 344 GSWDHTLRVWA 354 (354)
T ss_dssp EETTSEEEEEC
T ss_pred EcCCCCEEecC
Confidence 99999999996
No 9
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4.5e-46 Score=318.98 Aligned_cols=283 Identities=19% Similarity=0.259 Sum_probs=236.5
Q ss_pred eCCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEE
Q 038533 19 ESPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLAS 96 (337)
Q Consensus 19 ~~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~ 96 (337)
.|.++|++++|+ +++||+|+. |++|+||++......... ..|...|.+++|+|++. +|++
T Consensus 64 gH~~~V~~~~~sp~~~~l~s~s~----D~~v~iWd~~~~~~~~~~-----~~h~~~v~~~~~s~~g~---------~las 125 (380)
T 3iz6_a 64 GHSGKVYSLDWTPEKNWIVSASQ----DGRLIVWNALTSQKTHAI-----KLHCPWVMECAFAPNGQ---------SVAC 125 (380)
T ss_dssp CCSSCEEEEEECTTSSCEEEEET----TSEEEEEETTTTEEEEEE-----ECCCTTCCCCEECTTSS---------EEEE
T ss_pred ccccEEEEEEEcCCCCEEEEEeC----CCeEEEEECCCCccceEE-----ecCCCCEEEEEECCCCC---------EEEE
Confidence 468999999999 899999997 999999998765544333 67999999999999999 9999
Q ss_pred eC-C-eEEEEecCCC-----CccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhh----
Q 038533 97 SG-D-FLRLWDVGDS-----SIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQL---- 165 (337)
Q Consensus 97 ~~-~-~v~vw~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~---- 165 (337)
|+ | .+++|++.+. .......+.+|. ..|.++.|+|..+..|++|+.|++|++||+++++.+..+
T Consensus 126 ~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~-----~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~ 200 (380)
T 3iz6_a 126 GGLDSACSIFNLSSQADRDGNMPVSRVLTGHK-----GYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEF 200 (380)
T ss_dssp CCSSSCCEEEECCCCSSCCCSSTTCCBCCCCS-----SCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCS
T ss_pred eeCCCcEEEEECCCCccccCCccceeeccCCC-----cceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeeccc
Confidence 88 5 9999999753 223456677887 899999999955678999999999999999999877655
Q ss_pred -hccCCceeEEEeC--CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEE
Q 038533 166 -IAHDKEVYDICWG--EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVIL 242 (337)
Q Consensus 166 -~~~~~~v~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~ 242 (337)
.+|...|.+++|+ ++++|++|+.|+.|++||++.......... .|...|.+++|+| ++.+|++++.|+. |++|
T Consensus 201 ~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~--~h~~~v~~v~~~p-~~~~l~s~s~D~~-i~lw 276 (380)
T 3iz6_a 201 PSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYH--GHEGDINSVKFFP-DGQRFGTGSDDGT-CRLF 276 (380)
T ss_dssp SSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEEC--CCSSCCCEEEECT-TSSEEEEECSSSC-EEEE
T ss_pred CCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEEC--CcCCCeEEEEEec-CCCeEEEEcCCCe-EEEE
Confidence 5788999999998 578999999999999999985533333333 4788999999999 9999999999999 9999
Q ss_pred ECCCCCCCeEEeeccc-------ceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceee----eeCCCce
Q 038533 243 DIRSPTLPVAELERHR-------ACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSM----YSAGSEI 311 (337)
Q Consensus 243 d~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~----~~~~~~v 311 (337)
|+++ +.++..+..+. ..|++++|+|+++ +|++|+.||.|++||+..++ ....+ .+|...|
T Consensus 277 d~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~g~~dg~i~vwd~~~~~-------~~~~~~~~~~~h~~~v 347 (380)
T 3iz6_a 277 DMRT-GHQLQVYNREPDRNDNELPIVTSVAFSISGR-LLFAGYSNGDCYVWDTLLAE-------MVLNLGTLQNSHEGRI 347 (380)
T ss_dssp ETTT-TEEEEEECCCCSSSCCSSCSCSEEEECSSSS-EEEEECTTSCEEEEETTTCC-------EEEEECCSCSSCCCCC
T ss_pred ECCC-CcEEEEecccccccccccCceEEEEECCCCC-EEEEEECCCCEEEEECCCCc-------eEEEEecccCCCCCce
Confidence 9998 44555554332 2489999999999 99999999999999998222 12222 4799999
Q ss_pred eEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 312 NQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 312 ~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
.+++|+|+++.|++++.|+.|+||++
T Consensus 348 ~~l~~s~dg~~l~sgs~D~~i~iW~~ 373 (380)
T 3iz6_a 348 SCLGLSSDGSALCTGSWDKNLKIWAF 373 (380)
T ss_dssp CEEEECSSSSEEEEECTTSCEEEEEC
T ss_pred EEEEECCCCCEEEEeeCCCCEEEEec
Confidence 99999999999999999999999985
No 10
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=6.3e-44 Score=297.71 Aligned_cols=280 Identities=17% Similarity=0.286 Sum_probs=239.4
Q ss_pred eCCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEE
Q 038533 19 ESPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLAS 96 (337)
Q Consensus 19 ~~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~ 96 (337)
.|..+|++++|+ +++||+|+. ||.|++|+.......... .+|...|.+++|+|++. +|++
T Consensus 21 gh~~~v~~~~~s~~~~~l~s~~~----dg~i~iw~~~~~~~~~~~-----~~h~~~v~~~~~~~~~~---------~l~s 82 (312)
T 4ery_A 21 GHTKAVSSVKFSPNGEWLASSSA----DKLIKIWGAYDGKFEKTI-----SGHKLGISDVAWSSDSN---------LLVS 82 (312)
T ss_dssp CCSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTCCEEEEE-----CCCSSCEEEEEECTTSS---------EEEE
T ss_pred ccCCcEEEEEECCCCCEEEEeeC----CCeEEEEeCCCcccchhh-----ccCCCceEEEEEcCCCC---------EEEE
Confidence 468899999999 899999997 999999998765433332 68999999999999998 8888
Q ss_pred eC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCceeE
Q 038533 97 SG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYD 174 (337)
Q Consensus 97 ~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~ 174 (337)
++ | .|++||+.++ +.+..+.+|. ..|.+++|+| +++++++|+.|+.|++||+++++.+..+..|...|.+
T Consensus 83 ~~~d~~i~vwd~~~~--~~~~~~~~~~-----~~v~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~ 154 (312)
T 4ery_A 83 ASDDKTLKIWDVSSG--KCLKTLKGHS-----NYVFCCNFNP-QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 154 (312)
T ss_dssp EETTSEEEEEETTTC--CEEEEEECCS-----SCEEEEEECS-SSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred ECCCCEEEEEECCCC--cEEEEEcCCC-----CCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEE
Confidence 77 5 9999999998 6778888888 8999999999 9999999999999999999999988889999999999
Q ss_pred EEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEE
Q 038533 175 ICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAE 253 (337)
Q Consensus 175 ~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~ 253 (337)
++|+ ++++|++++.||.|++||+++++....+.. .+...+..++|+| ++++|++++.|+. |++||+++ .+++..
T Consensus 155 ~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~l~~~~~d~~-i~iwd~~~-~~~~~~ 229 (312)
T 4ery_A 155 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID--DDNPPVSFVKFSP-NGKYILAATLDNT-LKLWDYSK-GKCLKT 229 (312)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC--SSCCCEEEEEECT-TSSEEEEEETTTE-EEEEETTT-TEEEEE
T ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEec--cCCCceEEEEECC-CCCEEEEEcCCCe-EEEEECCC-CcEEEE
Confidence 9999 789999999999999999998875554433 2557899999999 9999999999998 99999998 556777
Q ss_pred eecccceeeE--EEeC-CCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEE--c
Q 038533 254 LERHRACVNA--IAWA-PQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIA--F 328 (337)
Q Consensus 254 ~~~~~~~v~~--~~~~-~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~ 328 (337)
+.+|...... ..++ +++. +|++|+.||.|++||+. + +.....+.+|...|.+++|+|+++.+++++ .
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~i~vwd~~--~-----~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~ 301 (312)
T 4ery_A 230 YTGHKNEKYCIFANFSVTGGK-WIVSGSEDNLVYIWNLQ--T-----KEIVQKLQGHTDVVISTACHPTENIIASAALEN 301 (312)
T ss_dssp ECSSCCSSSCCCEEEECSSSC-EEEECCTTSCEEEEETT--T-----CCEEEEECCCSSCEEEEEECSSSSEEEEEECTT
T ss_pred EEecCCceEEEEEEEEeCCCc-EEEEECCCCEEEEEECC--C-----chhhhhhhccCCcEEEEeecCcCCceEEEEccC
Confidence 8777654332 3344 5666 99999999999999998 3 122446778999999999999999888876 6
Q ss_pred CCcEEEEeC
Q 038533 329 SNKMQLLKV 337 (337)
Q Consensus 329 d~~i~iw~l 337 (337)
|+.|++|+.
T Consensus 302 d~~i~~W~~ 310 (312)
T 4ery_A 302 DKTIKLWKS 310 (312)
T ss_dssp TCCEEEEEC
T ss_pred CccEEEecC
Confidence 999999984
No 11
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.7e-44 Score=301.85 Aligned_cols=288 Identities=16% Similarity=0.154 Sum_probs=233.4
Q ss_pred eCCCceeEEEEe---cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEE
Q 038533 19 ESPYPLYAMAVC---GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLA 95 (337)
Q Consensus 19 ~~~~~v~~~~~s---~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~ 95 (337)
.|.++|++++|+ +++|++|+. |+.|++|++...............+|...|.+++|+|++. +|+
T Consensus 15 gH~~~V~~l~~~~~~~~~l~s~s~----D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~---------~l~ 81 (319)
T 3frx_A 15 GHNGWVTSLATSAGQPNLLLSASR----DKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGA---------YAL 81 (319)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEET----TSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSS---------EEE
T ss_pred cccceEEEEEccCCCccEEEEecC----CccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCC---------EEE
Confidence 478999999998 479999997 9999999997544322110011268999999999999998 888
Q ss_pred EeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCcee
Q 038533 96 SSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVY 173 (337)
Q Consensus 96 ~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~ 173 (337)
+++ | +|++||+.++ +....+.+|. ..|.+++|+| ++.+|++|+.|+.|++||++ ++.+..+.+|...|.
T Consensus 82 s~s~D~~v~~wd~~~~--~~~~~~~~h~-----~~v~~~~~~~-~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~ 152 (319)
T 3frx_A 82 SASWDKTLRLWDVATG--ETYQRFVGHK-----SDVMSVDIDK-KASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVS 152 (319)
T ss_dssp EEETTSEEEEEETTTT--EEEEEEECCS-----SCEEEEEECT-TSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEE
T ss_pred EEeCCCEEEEEECCCC--CeeEEEccCC-----CcEEEEEEcC-CCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEE
Confidence 887 6 9999999998 6788899998 9999999999 99999999999999999996 456677788999999
Q ss_pred EEEeCC-------CcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCC
Q 038533 174 DICWGE-------ARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRS 246 (337)
Q Consensus 174 ~~~~~~-------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~ 246 (337)
+++|.+ +..+++++.|+.|++||+++.+.... ...|...|.+++|+| ++.+|++++.|+. |++||+++
T Consensus 153 ~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~---~~~h~~~v~~~~~sp-~g~~l~s~~~dg~-i~iwd~~~ 227 (319)
T 3frx_A 153 QVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEAD---FIGHNSNINTLTASP-DGTLIASAGKDGE-IMLWNLAA 227 (319)
T ss_dssp EEEECCC------CCEEEEEETTSCEEEEETTTTEEEEE---ECCCCSCEEEEEECT-TSSEEEEEETTCE-EEEEETTT
T ss_pred EEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhhee---ecCCCCcEEEEEEcC-CCCEEEEEeCCCe-EEEEECCC
Confidence 999984 23799999999999999988764333 235788999999999 9999999999998 99999998
Q ss_pred CCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCC-CCCceeeeeCCCceeEEEEccCCCceEE
Q 038533 247 PTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPN-GIDPMSMYSAGSEINQLQWSPAQPDWLA 325 (337)
Q Consensus 247 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 325 (337)
.+++..+.. ...|.+++|+|++. +|++++. +.+++|+++........ .........|...+.+++|+|+|++|++
T Consensus 228 -~~~~~~~~~-~~~v~~~~~sp~~~-~la~~~~-~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s 303 (319)
T 3frx_A 228 -KKAMYTLSA-QDEVFSLAFSPNRY-WLAAATA-TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFA 303 (319)
T ss_dssp -TEEEEEEEC-CSCEEEEEECSSSS-EEEEEET-TEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEE
T ss_pred -CcEEEEecC-CCcEEEEEEcCCCC-EEEEEcC-CCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEE
Confidence 556777764 46899999999998 8888775 45999999822100000 0000112245678999999999999999
Q ss_pred EEcCCcEEEEeC
Q 038533 326 IAFSNKMQLLKV 337 (337)
Q Consensus 326 ~~~d~~i~iw~l 337 (337)
++.|+.|+||++
T Consensus 304 g~~Dg~i~vWd~ 315 (319)
T 3frx_A 304 GYTDNVIRVWQV 315 (319)
T ss_dssp EETTSCEEEEEE
T ss_pred eecCceEEEEEE
Confidence 999999999985
No 12
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=9.2e-44 Score=305.99 Aligned_cols=288 Identities=16% Similarity=0.253 Sum_probs=235.6
Q ss_pred eeeCCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCc-------------CCCCCCCCeEEEecCC
Q 038533 17 THESPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSL-------------SFDHPYPPTKLMFDPN 81 (337)
Q Consensus 17 ~~~~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~-------------~~~~~~~i~~i~~~~~ 81 (337)
.+.|...|.+++|+ +++||+|+ ++.++||++............. ...+...|.+++|+|+
T Consensus 60 ~~~h~~~V~~v~fspdg~~la~g~-----~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~d 134 (393)
T 1erj_A 60 SLDHTSVVCCVKFSNDGEYLATGC-----NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD 134 (393)
T ss_dssp EEECSSCCCEEEECTTSSEEEEEC-----BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTT
T ss_pred ecCCCCEEEEEEECCCCCEEEEEc-----CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCC
Confidence 45688999999999 89999987 7899999987654332210000 0122335899999999
Q ss_pred CCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCc
Q 038533 82 SSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKG 159 (337)
Q Consensus 82 ~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~ 159 (337)
++ +|++|+ | .|++||+.++ +....+.+|. ..|.+++|+| ++++|++|+.|+.|++||++++
T Consensus 135 g~---------~l~s~~~d~~i~iwd~~~~--~~~~~~~~h~-----~~v~~~~~~p-~~~~l~s~s~d~~v~iwd~~~~ 197 (393)
T 1erj_A 135 GK---------FLATGAEDRLIRIWDIENR--KIVMILQGHE-----QDIYSLDYFP-SGDKLVSGSGDRTVRIWDLRTG 197 (393)
T ss_dssp SS---------EEEEEETTSCEEEEETTTT--EEEEEECCCS-----SCEEEEEECT-TSSEEEEEETTSEEEEEETTTT
T ss_pred CC---------EEEEEcCCCeEEEEECCCC--cEEEEEccCC-----CCEEEEEEcC-CCCEEEEecCCCcEEEEECCCC
Confidence 99 888887 5 9999999988 6778889998 9999999999 9999999999999999999998
Q ss_pred cchhhhhccCCceeEEEeC--CCcEEEEEcCCCeEEEEECCCCCCceeee----cCCCCCCCceEEEeecCCCcEEEEEE
Q 038533 160 VVETQLIAHDKEVYDICWG--EARVFASVSADGSVRIFDLRDKEHSTIIY----ESPQPDTPLLRLAWNKQDLRYMATIL 233 (337)
Q Consensus 160 ~~~~~~~~~~~~v~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----~~~~~~~~i~~~~~~~~~~~~l~~~~ 233 (337)
+....+. +...+.+++|+ ++++|++|+.|+.|++||+++++....+. ....|...|.+++|+| ++.+|++++
T Consensus 198 ~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~g~~l~s~s 275 (393)
T 1erj_A 198 QCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR-DGQSVVSGS 275 (393)
T ss_dssp EEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECT-TSSEEEEEE
T ss_pred eeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECC-CCCEEEEEe
Confidence 8776665 56779999999 47899999999999999999887544432 1135778999999999 999999999
Q ss_pred ecCCEEEEEECCCCC-----------CCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCce
Q 038533 234 MDSNKVVILDIRSPT-----------LPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPM 302 (337)
Q Consensus 234 ~d~~~i~i~d~~~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~ 302 (337)
.|+. |++||++... .....+.+|...|.+++|+|++. +|++|+.||.|++||+. + +....
T Consensus 276 ~d~~-v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~sgs~D~~v~iwd~~--~-----~~~~~ 346 (393)
T 1erj_A 276 LDRS-VKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDE-YILSGSKDRGVLFWDKK--S-----GNPLL 346 (393)
T ss_dssp TTSE-EEEEEC---------------CEEEEEECCSSCEEEEEECGGGC-EEEEEETTSEEEEEETT--T-----CCEEE
T ss_pred CCCE-EEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCC-EEEEEeCCCeEEEEECC--C-----CeEEE
Confidence 9998 9999997632 23456778999999999999999 99999999999999998 3 22345
Q ss_pred eeeeCCCceeEEEEcc------CCCceEEEEcCCcEEEEeC
Q 038533 303 SMYSAGSEINQLQWSP------AQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 303 ~~~~~~~~v~~~~~~~------~~~~l~~~~~d~~i~iw~l 337 (337)
.+.+|...|.+++|+| +++.|++++.||.|+||++
T Consensus 347 ~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~ 387 (393)
T 1erj_A 347 MLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 387 (393)
T ss_dssp EEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEE
T ss_pred EECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcc
Confidence 6778999999999986 5778999999999999984
No 13
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.2e-44 Score=300.36 Aligned_cols=288 Identities=19% Similarity=0.307 Sum_probs=222.4
Q ss_pred eCCCceeEEEEecceEEEeeeeccCcceEEEEEecCCCcceecCCCcC-CCCCCCCeEEEecCCCCcccCcCCccEEEEe
Q 038533 19 ESPYPLYAMAVCGQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLS-FDHPYPPTKLMFDPNSSSRKSSSNRHLLASS 97 (337)
Q Consensus 19 ~~~~~v~~~~~s~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~-~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~ 97 (337)
.|..+|++++|++++||+|+. |+.|+||++......... .+. ..|...|.+++|+|++. +|+++
T Consensus 12 ~h~~~v~~~~~s~~~las~~~----D~~i~lw~~~~~~~~~~~--~~~~~~h~~~v~~v~~sp~~~---------~las~ 76 (330)
T 2hes_X 12 LYKEKIWSFDFSQGILATGST----DRKIKLVSVKYDDFTLID--VLDETAHKKAIRSVAWRPHTS---------LLAAG 76 (330)
T ss_dssp CCSSCEEEEEEETTEEEEEES----SSCEEEEECSSSCCEEEE--EECTTCCCSCEEEEEECTTSS---------EEEEE
T ss_pred cCCCceeeeccCCCEEEEEcC----CCEEEEEEecCCCeEEEE--EEecCCccCCEEEEEECCCCC---------EEEEE
Confidence 468999999999559999997 999999999765332221 121 34999999999999998 88888
Q ss_pred C-C-eEEEEecCCC-----CccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCc----cchhhhh
Q 038533 98 G-D-FLRLWDVGDS-----SIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKG----VVETQLI 166 (337)
Q Consensus 98 ~-~-~v~vw~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~----~~~~~~~ 166 (337)
+ | +|+||++... ...+...+.+|. ..|.+++|+| ++++|++|+.|+.|++||++.. +.+..+.
T Consensus 77 s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~-----~~V~~v~~sp-~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~ 150 (330)
T 2hes_X 77 SFDSTVSIWAKEESADRTFEMDLLAIIEGHE-----NEVKGVAWSN-DGYYLATCSRDKSVWIWETDESGEEYECISVLQ 150 (330)
T ss_dssp ETTSCEEEEEC-------CCCEEEEEEC---------CEEEEEECT-TSCEEEEEETTSCEEEEECCTTCCCCEEEEEEC
T ss_pred eCCCcEEEEEcccCcCccccceeEEEEcCCC-----CcEEEEEECC-CCCEEEEEeCCCEEEEEeccCCCCCeEEEEEec
Confidence 7 6 9999998642 124567788888 9999999999 9999999999999999999432 3556778
Q ss_pred ccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCC--CcEEEEEEecCCEEEEEE
Q 038533 167 AHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQD--LRYMATILMDSNKVVILD 243 (337)
Q Consensus 167 ~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~d~~~i~i~d 243 (337)
+|...|.+++|+ ++.+|++++.|++|++||.+.... ..+.....|...|.+++|+| + +.+|++++.|+. |++||
T Consensus 151 ~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~-~~~~~~~~h~~~v~~~~~~~-~~~~~~l~s~s~D~~-v~iw~ 227 (330)
T 2hes_X 151 EHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDW-ECVAVLNGHEGTVWSSDFDK-TEGVFRLCSGSDDST-VRVWK 227 (330)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE-EEEEEECCCSSCEEEEEECC-SSSSCEEEEEETTSC-EEEEE
T ss_pred cCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCe-eEEEEccCCCCcEEEEEecC-CCCeeEEEEEeCCCe-EEEEE
Confidence 899999999999 789999999999999999876531 12222335789999999999 6 678999999999 99999
Q ss_pred CCCCC-------CCeEEeec-ccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCce-eeeeCCC-ceeE
Q 038533 244 IRSPT-------LPVAELER-HRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPM-SMYSAGS-EINQ 313 (337)
Q Consensus 244 ~~~~~-------~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-~~~~~~~-~v~~ 313 (337)
++... .....+.. |...|.+++|++++ +|++++.||.|++|+...+.. .... ....|.. .|.+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~--~l~s~~~dg~v~iw~~~~~~~-----~~~~~~~~~h~~~~v~~ 300 (330)
T 2hes_X 228 YMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG--LIASVGADGVLAVYEEVDGEW-----KVFAKRALCHGVYEINV 300 (330)
T ss_dssp EEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS--CEEEEETTSCEEEEEEETTEE-----EEEEEESCTTTTSCEEE
T ss_pred ecCCCccccceeEEeeecccccccceEEEEEcCCC--EEEEEeCCCEEEEEEcCCCce-----EEEeccccccccceEEE
Confidence 97532 12333444 88999999999764 799999999999999872110 0011 2245776 8999
Q ss_pred EEEcc--CCCceEEEEcCCcEEEEeC
Q 038533 314 LQWSP--AQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 314 ~~~~~--~~~~l~~~~~d~~i~iw~l 337 (337)
++|+| +++.|++++.||.|+||++
T Consensus 301 v~~~~~~~~~~las~s~Dg~v~~W~~ 326 (330)
T 2hes_X 301 VKWLELNGKTILATGGDDGIVNFWSL 326 (330)
T ss_dssp EEEC-----CCEEEEETTSEEEEEEC
T ss_pred EEEecCCCceEEEEecCCCcEEEEEe
Confidence 99999 6888999999999999985
No 14
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.1e-42 Score=294.06 Aligned_cols=289 Identities=17% Similarity=0.224 Sum_probs=226.4
Q ss_pred eCCCceeEEEE-----e---cceEEEeeeeccCcceEEEEEecCCCcc--eecCCCcCCCCCCCCeEEEecCCCCcccCc
Q 038533 19 ESPYPLYAMAV-----C---GQRIAVGSFIEDYTNRVDVVSFEPESLS--IKTHPSLSFDHPYPPTKLMFDPNSSSRKSS 88 (337)
Q Consensus 19 ~~~~~v~~~~~-----s---~~~la~g~~~~~~d~~i~i~~~~~~~~~--~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~ 88 (337)
.|.++|++++| + +++||+|+. |+.|+||++...... .........+|...|.+++|+|++.
T Consensus 19 gH~~~V~~~~~~~s~~~~~d~~~l~sgs~----D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~----- 89 (343)
T 2xzm_R 19 GHSDWVTSIVAGFSQKENEDSPVLISGSR----DKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENC----- 89 (343)
T ss_dssp CCSSCEEEEEECCCSSTTCCCCEEEEEET----TSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTT-----
T ss_pred cchhhhhheeeEEEeecCCCCCEEEEEcC----CCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCC-----
Confidence 47899999999 4 789999997 999999999754321 0000011268999999999999998
Q ss_pred CCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccch--hh
Q 038533 89 SNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVE--TQ 164 (337)
Q Consensus 89 ~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~--~~ 164 (337)
++++++ | +|++||+.++ +....+.+|. ..|.+++|+| ++++|++++.|+.|++||+...... ..
T Consensus 90 ----~l~s~s~D~~v~lwd~~~~--~~~~~~~~h~-----~~v~~v~~sp-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~ 157 (343)
T 2xzm_R 90 ----FAISSSWDKTLRLWDLRTG--TTYKRFVGHQ-----SEVYSVAFSP-DNRQILSAGAEREIKLWNILGECKFSSAE 157 (343)
T ss_dssp ----EEEEEETTSEEEEEETTSS--CEEEEEECCC-----SCEEEEEECS-STTEEEEEETTSCEEEEESSSCEEEECCT
T ss_pred ----EEEEEcCCCcEEEEECCCC--cEEEEEcCCC-----CcEEEEEECC-CCCEEEEEcCCCEEEEEeccCCceeeeec
Confidence 888887 6 9999999998 6778889998 9999999999 9999999999999999999744322 22
Q ss_pred hhccCCceeEEEeCC-C----------cEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEE
Q 038533 165 LIAHDKEVYDICWGE-A----------RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATIL 233 (337)
Q Consensus 165 ~~~~~~~v~~~~~~~-~----------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~ 233 (337)
...|...|.+++|++ + .+|++++.||.|++||.+. +. ......|...|.+++|+| ++++|++++
T Consensus 158 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~---~~~~~~h~~~v~~~~~s~-~g~~l~sgs 232 (343)
T 2xzm_R 158 KENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF-QI---RYTFKAHESNVNHLSISP-NGKYIATGG 232 (343)
T ss_dssp TTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT-EE---EEEEECCSSCEEEEEECT-TSSEEEEEE
T ss_pred ccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC-ce---eEEEcCccccceEEEECC-CCCEEEEEc
Confidence 337889999999994 3 6899999999999999432 21 122224778999999999 999999999
Q ss_pred ecCCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCC--CCCCCc----eeeeeC
Q 038533 234 MDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAG--PNGIDP----MSMYSA 307 (337)
Q Consensus 234 ~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~--~~~~~~----~~~~~~ 307 (337)
.|+. |++||++....+...+. +...|.+++|+|++. +++++ .|+.|++|++....... .....+ ....+|
T Consensus 233 ~dg~-v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~-~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (343)
T 2xzm_R 233 KDKK-LLIWDILNLTYPQREFD-AGSTINQIAFNPKLQ-WVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGK 308 (343)
T ss_dssp TTCE-EEEEESSCCSSCSEEEE-CSSCEEEEEECSSSC-EEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCS
T ss_pred CCCe-EEEEECCCCcccceeec-CCCcEEEEEECCCCC-EEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCC
Confidence 9998 99999966455555553 456799999999987 66655 58889999998332111 000000 012268
Q ss_pred CCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 308 GSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 308 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
...|.+++|+|+++.|++++.||.|++|++
T Consensus 309 ~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~ 338 (343)
T 2xzm_R 309 NPQCTSLAWNALGKKLFAGFTDGVIRTFSF 338 (343)
T ss_dssp CCCEEEEEECSSSCCEEEEETTSEEEEEEE
T ss_pred CCceEEEEECCCCCeEEEecCCceEEEEEE
Confidence 888999999999999999999999999984
No 15
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.2e-42 Score=291.00 Aligned_cols=289 Identities=17% Similarity=0.218 Sum_probs=245.7
Q ss_pred ccceeeeeCCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcC
Q 038533 12 SENSVTHESPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSS 89 (337)
Q Consensus 12 ~~~~~~~~~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~ 89 (337)
.+++..+.|..+|++++|+ +++|++++ ||.|++|+++...............|...|.+++|+|++.
T Consensus 42 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-----dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~------ 110 (337)
T 1gxr_A 42 ARQINTLNHGEVVCAVTISNPTRHVYTGG-----KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGC------ 110 (337)
T ss_dssp EEEEEEECCSSCCCEEEECSSSSEEEEEC-----BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSS------
T ss_pred cccceeccCCCceEEEEEecCCcEEEEcC-----CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCC------
Confidence 3455566789999999999 88888887 8999999998654322210011137899999999999998
Q ss_pred CccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhc
Q 038533 90 NRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIA 167 (337)
Q Consensus 90 ~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~ 167 (337)
+|++++ + .|++||+.+++......+..|. ..|.+++|+| +++++++++.||.|++||+++++.+..+..
T Consensus 111 ---~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~-----~~i~~~~~~~-~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~ 181 (337)
T 1gxr_A 111 ---TLIVGGEASTLSIWDLAAPTPRIKAELTSSA-----PACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQG 181 (337)
T ss_dssp ---EEEEEESSSEEEEEECCCC--EEEEEEECSS-----SCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred ---EEEEEcCCCcEEEEECCCCCcceeeecccCC-----CceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCceeeeeec
Confidence 777776 5 9999999998655677788887 8999999999 999999999999999999999998888889
Q ss_pred cCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCC
Q 038533 168 HDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRS 246 (337)
Q Consensus 168 ~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~ 246 (337)
|...+.+++|+ +++++++++.||.|++||+++++...... +...+.+++|+| ++.++++++.++. |++||++.
T Consensus 182 ~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~----~~~~v~~~~~s~-~~~~l~~~~~~~~-i~~~~~~~ 255 (337)
T 1gxr_A 182 HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD----FTSQIFSLGYCP-TGEWLAVGMESSN-VEVLHVNK 255 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE----CSSCEEEEEECT-TSSEEEEEETTSC-EEEEETTS
T ss_pred ccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec----CCCceEEEEECC-CCCEEEEEcCCCc-EEEEECCC
Confidence 99999999999 78899999999999999999887544432 457899999999 9999999999998 99999987
Q ss_pred CCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEE
Q 038533 247 PTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAI 326 (337)
Q Consensus 247 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 326 (337)
. . ...+..|...|.+++|+|+++ +|++++.||.|++|++..++ ......|...|.+++|+|+++.++++
T Consensus 256 ~-~-~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~--------~~~~~~~~~~v~~~~~s~~~~~l~~~ 324 (337)
T 1gxr_A 256 P-D-KYQLHLHESCVLSLKFAYCGK-WFVSTGKDNLLNAWRTPYGA--------SIFQSKESSSVLSCDISVDDKYIVTG 324 (337)
T ss_dssp S-C-EEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCC--------EEEEEECSSCEEEEEECTTSCEEEEE
T ss_pred C-C-eEEEcCCccceeEEEECCCCC-EEEEecCCCcEEEEECCCCe--------EEEEecCCCcEEEEEECCCCCEEEEe
Confidence 3 3 456778999999999999999 99999999999999998222 34556789999999999999999999
Q ss_pred EcCCcEEEEeC
Q 038533 327 AFSNKMQLLKV 337 (337)
Q Consensus 327 ~~d~~i~iw~l 337 (337)
+.||.|++|++
T Consensus 325 ~~dg~i~iw~~ 335 (337)
T 1gxr_A 325 SGDKKATVYEV 335 (337)
T ss_dssp ETTSCEEEEEE
T ss_pred cCCCeEEEEEE
Confidence 99999999985
No 16
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=7.5e-43 Score=290.03 Aligned_cols=243 Identities=14% Similarity=0.188 Sum_probs=213.5
Q ss_pred CCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEE
Q 038533 67 FDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGT 144 (337)
Q Consensus 67 ~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 144 (337)
.+|.+.|.+++|+|+++ +|++++ | .|++||+.++ ..+..+..|. .+|.+++|+| ++++|++
T Consensus 10 ~~h~~~V~~~~fsp~~~---------~l~s~~~dg~v~lWd~~~~--~~~~~~~~~~-----~~v~~~~~~~-~~~~l~s 72 (304)
T 2ynn_A 10 SNRSDRVKGIDFHPTEP---------WVLTTLYSGRVELWNYETQ--VEVRSIQVTE-----TPVRAGKFIA-RKNWIIV 72 (304)
T ss_dssp EEECSCEEEEEECSSSS---------EEEEEETTSEEEEEETTTT--EEEEEEECCS-----SCEEEEEEEG-GGTEEEE
T ss_pred cCCCCceEEEEECCCCC---------EEEEEcCCCcEEEEECCCC--ceeEEeeccC-----CcEEEEEEeC-CCCEEEE
Confidence 57999999999999999 888877 5 9999999988 6778888888 8999999999 9999999
Q ss_pred eeCCCcEEEEeCCCccchhhhhccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeec
Q 038533 145 CSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNK 223 (337)
Q Consensus 145 ~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~ 223 (337)
|+.|+.|++||+++++.+..+.+|...|.+++|+ ++.+|++|+.|++|++||++++........ .|...|.+++|+|
T Consensus 73 ~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~--~h~~~v~~v~~~p 150 (304)
T 2ynn_A 73 GSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE--GHEHFVMCVAFNP 150 (304)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEEC--CCCSCEEEEEECT
T ss_pred ECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhc--ccCCcEEEEEECC
Confidence 9999999999999999999999999999999999 788999999999999999988754433333 4788999999999
Q ss_pred CCCcEEEEEEecCCEEEEEECCCCCCCeEEeecccceeeEEEeCC--CCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCc
Q 038533 224 QDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAP--QSRRHICSVGDDSQAFIWELPLPPVAGPNGIDP 301 (337)
Q Consensus 224 ~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~ 301 (337)
.++.+|++++.|+. |++||++...........|...+..+.|+| +++ +|++|+.|+.|++||++ + +...
T Consensus 151 ~~~~~l~sgs~D~~-v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~s~D~~i~iWd~~--~-----~~~~ 221 (304)
T 2ynn_A 151 KDPSTFASGCLDRT-VKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKP-YMITASDDLTIKIWDYQ--T-----KSCV 221 (304)
T ss_dssp TCTTEEEEEETTSE-EEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCC-EEEEEETTSEEEEEETT--T-----TEEE
T ss_pred CCCCEEEEEeCCCe-EEEEECCCCCccceeccCCcCcEEEEEEEEcCCCC-EEEEEcCCCeEEEEeCC--C-----Cccc
Confidence 67889999999998 999999885444444456667899999987 566 99999999999999998 3 2234
Q ss_pred eeeeeCCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 302 MSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 302 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
..+.+|...|.+++|+|+++.|++++.||.|++|++
T Consensus 222 ~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~ 257 (304)
T 2ynn_A 222 ATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNS 257 (304)
T ss_dssp EEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEET
T ss_pred eeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 577889999999999999999999999999999985
No 17
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.1e-43 Score=309.42 Aligned_cols=310 Identities=12% Similarity=0.127 Sum_probs=228.7
Q ss_pred ccceeeeeCCCceeEEEEe--c---------ceEEEeeee---------------ccCcceEEEEEecCCCcceecCCCc
Q 038533 12 SENSVTHESPYPLYAMAVC--G---------QRIAVGSFI---------------EDYTNRVDVVSFEPESLSIKTHPSL 65 (337)
Q Consensus 12 ~~~~~~~~~~~~v~~~~~s--~---------~~la~g~~~---------------~~~d~~i~i~~~~~~~~~~~~~~~~ 65 (337)
.+....+.+.++|++++|+ + ++||+|+.. .+.|+.|+||+++...........+
T Consensus 124 ~r~~~~~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l 203 (524)
T 2j04_B 124 KRRGFIYNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTI 203 (524)
T ss_dssp CSCEEEEECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEE
T ss_pred CcceEEEECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEE
Confidence 4455677789999999999 5 789887742 2358999999998755332110011
Q ss_pred CCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCcc---------ceeeecCCCCCcccCCeeEEEe
Q 038533 66 SFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIE---------PVAVLNNSKSSEFCAPLTSFDW 134 (337)
Q Consensus 66 ~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~~~ 134 (337)
..|.+.|.+++|+|++.. ...+.+||+++ | +|++||+.++... +...+.+|. ..|++++|
T Consensus 204 -~~~~~~V~~v~wsp~~~~---~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~-----~~v~sv~~ 274 (524)
T 2j04_B 204 -VHSFGEVWDLKWHEGCHA---PHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLAD-----SLITTFDF 274 (524)
T ss_dssp -EECCCSEEEEEECSSCCC---SSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTT-----TCEEEEEE
T ss_pred -EecCCcEEEEEECCCCCC---CCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCC-----CCEEEEEe
Confidence 456788999999997210 00013888877 6 9999999876321 234677777 89999999
Q ss_pred ecCCCCeEEEeeCCCcEEEEeCCCcc-chhhhhccCCceeEE--EeC-CC-cEEEEEcCCCeEEEEECCCCCCceeeecC
Q 038533 135 NEIEPKRIGTCSIDTTCTIWDIEKGV-VETQLIAHDKEVYDI--CWG-EA-RVFASVSADGSVRIFDLRDKEHSTIIYES 209 (337)
Q Consensus 135 ~~~~~~~l~~~~~dg~i~v~d~~~~~-~~~~~~~~~~~v~~~--~~~-~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 209 (337)
++ + ..|++|+.||+|++||+++++ +...+.+|...|.++ +|+ ++ .+|++|+.|++|++||+++.+....+...
T Consensus 275 s~-~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~ 352 (524)
T 2j04_B 275 LS-P-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSR 352 (524)
T ss_dssp SS-S-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEE
T ss_pred cC-C-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccc
Confidence 97 4 589999999999999998764 445678899999999 456 45 79999999999999999987654443321
Q ss_pred CCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCC
Q 038533 210 PQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 210 ~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 289 (337)
.....+.+++|+| ++..+++++.|+. |++||+++ ...+..+.+|...|++++|+|+++ +|++|+.||+|++||+.
T Consensus 353 -~~~~~v~~v~fsp-~~~~l~s~~~d~t-v~lwd~~~-~~~~~~l~gH~~~V~sva~Sp~g~-~l~Sgs~Dgtv~lwd~~ 427 (524)
T 2j04_B 353 -FRGSNLVPVVYCP-QIYSYIYSDGASS-LRAVPSRA-AFAVHPLVSRETTITAIGVSRLHP-MVLAGSADGSLIITNAA 427 (524)
T ss_dssp -CSCCSCCCEEEET-TTTEEEEECSSSE-EEEEETTC-TTCCEEEEECSSCEEEEECCSSCC-BCEEEETTTEEECCBSC
T ss_pred -cccCcccceEeCC-CcCeEEEeCCCCc-EEEEECcc-cccceeeecCCCceEEEEeCCCCC-eEEEEECCCEEEEEech
Confidence 1123588999999 8999999999988 99999998 555678889999999999999999 99999999999999875
Q ss_pred CCCCCC-------------------CC------------------CCCceeeeeCCCceeEEEEccCCC---ceEEEEcC
Q 038533 290 LPPVAG-------------------PN------------------GIDPMSMYSAGSEINQLQWSPAQP---DWLAIAFS 329 (337)
Q Consensus 290 ~~~~~~-------------------~~------------------~~~~~~~~~~~~~v~~~~~~~~~~---~l~~~~~d 329 (337)
...... |. +.....+.+|...|.+++|+|+++ .+++++.|
T Consensus 428 ~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~ 507 (524)
T 2j04_B 428 RRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSA 507 (524)
T ss_dssp SSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTT
T ss_pred HhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccC
Confidence 321110 00 111234557889999999999965 66777788
Q ss_pred CcEEEEeC
Q 038533 330 NKMQLLKV 337 (337)
Q Consensus 330 ~~i~iw~l 337 (337)
|.|+||++
T Consensus 508 g~vrlw~l 515 (524)
T 2j04_B 508 GLLTLEYL 515 (524)
T ss_dssp SEEEEEEC
T ss_pred ceEEEEEc
Confidence 99999986
No 18
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=5.9e-42 Score=288.69 Aligned_cols=250 Identities=16% Similarity=0.241 Sum_probs=208.6
Q ss_pred cceeeeeCCCceeEEEEe-cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCc
Q 038533 13 ENSVTHESPYPLYAMAVC-GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNR 91 (337)
Q Consensus 13 ~~~~~~~~~~~v~~~~~s-~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~ 91 (337)
.....+.+..+|.+++|+ .+.|++|+. ||.|+||+++........... ..+|.+.|++++|+|+++
T Consensus 74 ~~~~~~~~~~~v~~~~~s~d~~l~~~s~----dg~v~lWd~~~~~~~~~~~~~-~~~H~~~V~~v~~spdg~-------- 140 (344)
T 4gqb_B 74 FCSAGVQTEAGVADLTWVGERGILVASD----SGAVELWELDENETLIVSKFC-KYEHDDIVSTVSVLSSGT-------- 140 (344)
T ss_dssp GCSEEEEESSCEEEEEEETTTEEEEEET----TSEEEEEEECTTSSCEEEEEE-EECCSSCEEEEEECTTSS--------
T ss_pred eeeeeeccCCCEEEEEEeCCCeEEEEEC----CCEEEEEeccCCCceeEeecc-ccCCCCCEEEEEECCCCC--------
Confidence 344456677889999999 788899996 999999999876544332111 258999999999999999
Q ss_pred cEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhh--c
Q 038533 92 HLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLI--A 167 (337)
Q Consensus 92 ~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~--~ 167 (337)
+|++|+ | +|++||+.++ +++..+.+|. ..|.+++|+|....+|++|+.|+.|++||+++++....+. .
T Consensus 141 -~l~sgs~d~~i~iwd~~~~--~~~~~~~~h~-----~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~ 212 (344)
T 4gqb_B 141 -QAVSGSKDICIKVWDLAQQ--VVLSSYRAHA-----AQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSA 212 (344)
T ss_dssp -EEEEEETTSCEEEEETTTT--EEEEEECCCS-----SCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC---
T ss_pred -EEEEEeCCCeEEEEECCCC--cEEEEEcCcC-----CceEEEEecCCCCCceeeeccccccccccccccceeeeeecce
Confidence 899887 5 9999999998 7888999998 9999999999444688999999999999999998776654 4
Q ss_pred cCCceeEEEeC--CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCC-cEEEEEEecCCEEEEEEC
Q 038533 168 HDKEVYDICWG--EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDL-RYMATILMDSNKVVILDI 244 (337)
Q Consensus 168 ~~~~v~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~~~~~d~~~i~i~d~ 244 (337)
+...+.+++|+ ++++|++|+.||.|++||+++++....+. .|...|.+++|+| ++ ++|++++.|+. |++||+
T Consensus 213 ~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~---~h~~~v~~v~fsp-~g~~~lasgs~D~~-i~vwd~ 287 (344)
T 4gqb_B 213 PGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSA---VHSQCVTGLVFSP-HSVPFLASLSEDCS-LAVLDS 287 (344)
T ss_dssp -CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEE---CCSSCEEEEEECS-SSSCCEEEEETTSC-EEEECT
T ss_pred eeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEc---CCCCCEEEEEEcc-CCCeEEEEEeCCCe-EEEEEC
Confidence 56678999999 36789999999999999999988655543 4778999999999 65 68999999999 999999
Q ss_pred CCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCC
Q 038533 245 RSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPL 290 (337)
Q Consensus 245 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 290 (337)
++ ++ +..+.+|...|++++|+|+++.+|++++.||+|++|++..
T Consensus 288 ~~-~~-~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 288 SL-SE-LFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp TC-CE-EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred CC-Cc-EEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 87 43 4567899999999999999986788999999999999983
No 19
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=5.8e-42 Score=310.80 Aligned_cols=283 Identities=17% Similarity=0.227 Sum_probs=234.1
Q ss_pred CCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC
Q 038533 21 PYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG 98 (337)
Q Consensus 21 ~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~ 98 (337)
.+.+.+++|+ |++||+++ ++.|+||++......... .+|...|++++|+|++. +||+|+
T Consensus 18 ~g~~~~~~~spdg~~l~~~~-----~~~v~l~~~~~~~~~~~~-----~~h~~~v~~~~~spdg~---------~lasg~ 78 (611)
T 1nr0_A 18 RGTAVVLGNTPAGDKIQYCN-----GTSVYTVPVGSLTDTEIY-----TEHSHQTTVAKTSPSGY---------YCASGD 78 (611)
T ss_dssp TTCCCCCEECTTSSEEEEEE-----TTEEEEEETTCSSCCEEE-----CCCSSCEEEEEECTTSS---------EEEEEE
T ss_pred cCceeEEeeCCCCCEEEeCC-----CCEEEEecCCCcccCeEe-----cCCCCceEEEEECCCCc---------EEEEEe
Confidence 5778999999 88999988 789999998754433332 68999999999999999 999988
Q ss_pred -C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCC----CcEEEEeCCCccchhhhhccCCce
Q 038533 99 -D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSID----TTCTIWDIEKGVVETQLIAHDKEV 172 (337)
Q Consensus 99 -~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d----g~i~v~d~~~~~~~~~~~~~~~~v 172 (337)
| +|+|||+.+++......+.+|. .+|.+++|+| +++.|++++.+ +.|++|| .++....+.+|...|
T Consensus 79 ~d~~v~lWd~~~~~~~~~~~~~~~~-----~~v~~v~fs~-dg~~l~~~~~~~~~~~~v~~wd--~~~~~~~l~gh~~~v 150 (611)
T 1nr0_A 79 VHGNVRIWDTTQTTHILKTTIPVFS-----GPVKDISWDS-ESKRIAAVGEGRERFGHVFLFD--TGTSNGNLTGQARAM 150 (611)
T ss_dssp TTSEEEEEESSSTTCCEEEEEECSS-----SCEEEEEECT-TSCEEEEEECCSSCSEEEEETT--TCCBCBCCCCCSSCE
T ss_pred CCCCEEEeECCCCcceeeEeecccC-----CceEEEEECC-CCCEEEEEECCCCceeEEEEee--CCCCcceecCCCCCc
Confidence 5 9999999766445566788888 8999999999 99999998865 4788887 456677888999999
Q ss_pred eEEEeC-CCc-EEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCC
Q 038533 173 YDICWG-EAR-VFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLP 250 (337)
Q Consensus 173 ~~~~~~-~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~ 250 (337)
++++|+ ++. .|++++.|++|++||.+..+.... ...|...|.+++|+| ++++|++++.|+. |++||+++ +++
T Consensus 151 ~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~---l~~H~~~V~~v~fsp-dg~~las~s~D~~-i~lwd~~~-g~~ 224 (611)
T 1nr0_A 151 NSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKST---FGEHTKFVHSVRYNP-DGSLFASTGGDGT-IVLYNGVD-GTK 224 (611)
T ss_dssp EEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEE---ECCCSSCEEEEEECT-TSSEEEEEETTSC-EEEEETTT-CCE
T ss_pred eEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeee---eccccCceEEEEECC-CCCEEEEEECCCc-EEEEECCC-CcE
Confidence 999999 444 699999999999999877653332 235889999999999 9999999999999 99999987 555
Q ss_pred eEEee-------cccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCC---------------------------
Q 038533 251 VAELE-------RHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGP--------------------------- 296 (337)
Q Consensus 251 ~~~~~-------~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~--------------------------- 296 (337)
+..+. +|...|.+++|+|+++ +|++++.|++|++||+..++....
T Consensus 225 ~~~~~~~~~~~~~h~~~V~~v~~spdg~-~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d 303 (611)
T 1nr0_A 225 TGVFEDDSLKNVAHSGSVFGLTWSPDGT-KIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISAN 303 (611)
T ss_dssp EEECBCTTSSSCSSSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETT
T ss_pred eeeeccccccccccCCCEEEEEECCCCC-EEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCC
Confidence 66663 7999999999999999 999999999999999983321100
Q ss_pred ---------CCCCceeeeeCCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 297 ---------NGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 297 ---------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
.+.....+.+|...|.+++|+|+++.|++++.|+.|++|++
T Consensus 304 ~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~ 353 (611)
T 1nr0_A 304 GFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDI 353 (611)
T ss_dssp CCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEEC
Confidence 00011234579999999999999999999999999999985
No 20
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=8.3e-42 Score=294.23 Aligned_cols=286 Identities=10% Similarity=0.164 Sum_probs=235.9
Q ss_pred eCCCceeEEEEecceEEEeeeeccCcceEEEEEecCCC------cceecCCCcCCCCCCCCeEEEecCC----C---Ccc
Q 038533 19 ESPYPLYAMAVCGQRIAVGSFIEDYTNRVDVVSFEPES------LSIKTHPSLSFDHPYPPTKLMFDPN----S---SSR 85 (337)
Q Consensus 19 ~~~~~v~~~~~s~~~la~g~~~~~~d~~i~i~~~~~~~------~~~~~~~~~~~~~~~~i~~i~~~~~----~---~~~ 85 (337)
.|..+|++++|++++||+|+. ||.|+||+++... .... ...|...|.+++|+|+ + .
T Consensus 14 ~h~~~i~~~~~~~~~l~s~~~----dg~i~iw~~~~~~~~~~~~~~~~-----~~~h~~~v~~~~~~~~~~~~g~~~~-- 82 (397)
T 1sq9_A 14 AHDADIFSVSACNSFTVSCSG----DGYLKVWDNKLLDNENPKDKSYS-----HFVHKSGLHHVDVLQAIERDAFELC-- 82 (397)
T ss_dssp CSSSCEEEEEECSSEEEEEET----TSEEEEEESBCCTTCCGGGGEEE-----EECCTTCEEEEEEEEEEETTTEEEE--
T ss_pred hhhcCeEEEEecCCeEEEEcC----CCEEEEEECCCcccccCCCcceE-----EecCCCcEEEEEEecccccCCcccc--
Confidence 478999999999889999997 9999999998765 1222 2589999999999999 8 7
Q ss_pred cCcCCccEEEEeC-C-eEEEEecCCCCccc-----eeeecCCCCCcccCCeeEEEee----cCCCCe-EEEeeCCCcEEE
Q 038533 86 KSSSNRHLLASSG-D-FLRLWDVGDSSIEP-----VAVLNNSKSSEFCAPLTSFDWN----EIEPKR-IGTCSIDTTCTI 153 (337)
Q Consensus 86 ~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~~~~----~~~~~~-l~~~~~dg~i~v 153 (337)
+|++++ + .|++|++.++ .. ...+..|........|.+++|+ | ++++ |++++.||.|++
T Consensus 83 -------~l~s~~~dg~i~iw~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~l~~~~~dg~i~i 152 (397)
T 1sq9_A 83 -------LVATTSFSGDLLFYRITRE--DETKKVIFEKLDLLDSDMKKHSFWALKWGASNDR-LLSHRLVATDVKGTTYI 152 (397)
T ss_dssp -------EEEEEETTSCEEEEEEEEC--TTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEE
T ss_pred -------EEEEEcCCCCEEEEEccCC--cccccccceeecccccccCCCcEEEEEEeeccCC-CCceEEEEEeCCCcEEE
Confidence 777776 5 9999999987 33 6667766211001789999999 8 8899 999999999999
Q ss_pred EeCCC------ccchh-----hh-------hccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCC--
Q 038533 154 WDIEK------GVVET-----QL-------IAHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQP-- 212 (337)
Q Consensus 154 ~d~~~------~~~~~-----~~-------~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-- 212 (337)
||+++ ++.+. .+ ..|...|.+++|+ ++ ++++++.||.|++||+++.+....+.....|
T Consensus 153 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~ 231 (397)
T 1sq9_A 153 WKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMIN 231 (397)
T ss_dssp EEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---C
T ss_pred EeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccc
Confidence 99998 77666 66 3478899999999 67 9999999999999999987755544432225
Q ss_pred -CCCceEEEeecCCCcEEEEEEec---CCEEEEEECCCCCCCeEEeec-------------ccceeeEEEeCCCCCCeEE
Q 038533 213 -DTPLLRLAWNKQDLRYMATILMD---SNKVVILDIRSPTLPVAELER-------------HRACVNAIAWAPQSRRHIC 275 (337)
Q Consensus 213 -~~~i~~~~~~~~~~~~l~~~~~d---~~~i~i~d~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~~l~ 275 (337)
...+.+++|+| ++.+|++++.| +. |++||+++ .+++..+.. |...|.+++|+|+++ +|+
T Consensus 232 ~~~~i~~i~~~~-~~~~l~~~~~d~~~g~-i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~ 307 (397)
T 1sq9_A 232 NSNSIRSVKFSP-QGSLLAIAHDSNSFGC-ITLYETEF-GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE-TLC 307 (397)
T ss_dssp CCCCEEEEEECS-STTEEEEEEEETTEEE-EEEEETTT-CCEEEEECBC--------CCBSBSSCEEEEEECSSSS-EEE
T ss_pred cCCccceEEECC-CCCEEEEEecCCCCce-EEEEECCC-CcccceeccCcccccccccccccCCcEEEEEECCCCC-EEE
Confidence 78999999999 89999999999 87 99999998 567888888 999999999999999 999
Q ss_pred EEcCCCcEEEEeCCCCCCCCCCCCCceeee------eC---------------CCceeEEEEccCC----------CceE
Q 038533 276 SVGDDSQAFIWELPLPPVAGPNGIDPMSMY------SA---------------GSEINQLQWSPAQ----------PDWL 324 (337)
Q Consensus 276 ~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~------~~---------------~~~v~~~~~~~~~----------~~l~ 324 (337)
+++.||.|++||++..+ ....+. .| ...|.+++|+|++ +.|+
T Consensus 308 ~~~~dg~i~iwd~~~~~-------~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~ 380 (397)
T 1sq9_A 308 SAGWDGKLRFWDVKTKE-------RITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLC 380 (397)
T ss_dssp EEETTSEEEEEETTTTE-------EEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEE
T ss_pred EEeCCCeEEEEEcCCCc-------eeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEE
Confidence 99999999999998222 233444 56 8999999999998 6899
Q ss_pred EEEcCCcEEEEeC
Q 038533 325 AIAFSNKMQLLKV 337 (337)
Q Consensus 325 ~~~~d~~i~iw~l 337 (337)
+++.||.|++|++
T Consensus 381 s~~~dg~i~iw~~ 393 (397)
T 1sq9_A 381 CVCLDRSIRWFRE 393 (397)
T ss_dssp EEETTTEEEEEEE
T ss_pred EecCCCcEEEEEc
Confidence 9999999999985
No 21
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.5e-41 Score=306.65 Aligned_cols=272 Identities=19% Similarity=0.340 Sum_probs=236.2
Q ss_pred eCCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEE
Q 038533 19 ESPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLAS 96 (337)
Q Consensus 19 ~~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~ 96 (337)
.|..+|.+++|+ +++|++++. |+.|++|+.+... ... ...|...|.+++|+|++. +|++
T Consensus 301 ~h~~~v~~~~~~~~~~~l~t~~~----d~~i~~w~~~~~~--~~~----~~~~~~~v~~~~~s~~g~---------~l~~ 361 (577)
T 2ymu_A 301 GHSSSVWGVAFSPDGQTIASASD----DKTVKLWNRNGQH--LQT----LTGHSSSVWGVAFSPDGQ---------TIAS 361 (577)
T ss_dssp CCSSCEEEEEECTTSSEEEEEET----TSCEEEEETTSCE--EEE----ECCCSSCEEEEEECTTSS---------EEEE
T ss_pred cCCCCeEEEEECCCCCEEEEEeC----CCeEEEEeCCCCe--eEE----EeCCCCCEEEEEECCCCC---------EEEE
Confidence 357889999999 889999996 9999999876433 222 267899999999999998 8888
Q ss_pred eC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCceeE
Q 038533 97 SG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYD 174 (337)
Q Consensus 97 ~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~ 174 (337)
++ + .|++|+... +....+.+|. ..|.+++|+| ++++|++++.|+.|++||. +++.+..+.+|...|++
T Consensus 362 ~~~dg~v~~~~~~~---~~~~~~~~~~-----~~v~~~~~s~-dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~ 431 (577)
T 2ymu_A 362 ASDDKTVKLWNRNG---QLLQTLTGHS-----SSVRGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWG 431 (577)
T ss_dssp EETTSEEEEEETTC---CEEEEEECCS-----SCEEEEEECT-TSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEE
T ss_pred EeCCCEEEEEcCCC---CEEEEecCCC-----CCeEEEEECC-CCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEE
Confidence 87 4 999999654 4677888888 8999999999 9999999999999999995 56777888899999999
Q ss_pred EEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEE
Q 038533 175 ICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAE 253 (337)
Q Consensus 175 ~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~ 253 (337)
++|+ ++++|++++.|+.|++||... +....+ ..|...+.+++|+| ++++|++++.|+. |++||.. ++++..
T Consensus 432 ~~~s~d~~~l~~~~~d~~v~~w~~~~-~~~~~~---~~~~~~v~~~~~sp-d~~~las~~~d~~-i~iw~~~--~~~~~~ 503 (577)
T 2ymu_A 432 VAFSPDDQTIASASDDKTVKLWNRNG-QLLQTL---TGHSSSVRGVAFSP-DGQTIASASDDKT-VKLWNRN--GQLLQT 503 (577)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTS-CEEEEE---ECCSSCEEEEEECT-TSCEEEEEETTSE-EEEEETT--SCEEEE
T ss_pred EEECCCCCEEEEEcCCCEEEEEECCC-CEEEEE---cCCCCCEEEEEEcC-CCCEEEEEeCCCE-EEEEcCC--CCEEEE
Confidence 9999 789999999999999999743 322222 24678999999999 9999999999998 9999964 567889
Q ss_pred eecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEcCCcEE
Q 038533 254 LERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQ 333 (337)
Q Consensus 254 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 333 (337)
+.+|...|++++|+|+++ +|++++.||.|++||.. +.....+.+|...|++++|+||+++|++++.|+.|+
T Consensus 504 ~~~h~~~v~~l~~s~dg~-~l~s~~~dg~v~lwd~~--------~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~ 574 (577)
T 2ymu_A 504 LTGHSSSVRGVAFSPDGQ-TIASASDDKTVKLWNRN--------GQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVK 574 (577)
T ss_dssp EECCSSCEEEEEECTTSS-CEEEEETTSEEEEECTT--------SCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred EeCCCCCEEEEEEcCCCC-EEEEEECcCEEEEEeCC--------CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEE
Confidence 999999999999999999 99999999999999975 233557789999999999999999999999999999
Q ss_pred EEe
Q 038533 334 LLK 336 (337)
Q Consensus 334 iw~ 336 (337)
+||
T Consensus 575 ~Wd 577 (577)
T 2ymu_A 575 LWN 577 (577)
T ss_dssp EEC
T ss_pred EeC
Confidence 997
No 22
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=9.9e-42 Score=285.15 Aligned_cols=246 Identities=17% Similarity=0.313 Sum_probs=214.6
Q ss_pred CCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEE
Q 038533 67 FDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGT 144 (337)
Q Consensus 67 ~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 144 (337)
.+|.+.|.+++|+|++. ..+.+|++|+ | +|+||++..++......+.+|. ..|.+++|++ ++.++++
T Consensus 29 ~~H~~~V~~v~~~~~~~-----~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~-----~~v~~~~~~~-~~~~l~s 97 (321)
T 3ow8_A 29 QAHDDAIWSVAWGTNKK-----ENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQ-----LGVVSVDISH-TLPIAAS 97 (321)
T ss_dssp TSSSSCEEEEEEC------------CEEEEEETTSCEEEEEEETTEEEEEEEECCCS-----SCEEEEEECS-SSSEEEE
T ss_pred ccCCCcEEEEEEecCCC-----CCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCC-----CCEEEEEECC-CCCEEEE
Confidence 68999999999998632 0113888887 6 9999999887655667788998 9999999998 8999999
Q ss_pred eeCCCcEEEEeCCCccchhhhhccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeec
Q 038533 145 CSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNK 223 (337)
Q Consensus 145 ~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~ 223 (337)
++.|+.|++||+++++.+..+..|...+.+++|+ ++++|++++.||.|++||+++++....+. .+...+.+++|+|
T Consensus 98 ~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~---~~~~~v~~~~~sp 174 (321)
T 3ow8_A 98 SSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLD---TRGKFILSIAYSP 174 (321)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEE---CSSSCEEEEEECT
T ss_pred EeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEec---CCCceEEEEEECC
Confidence 9999999999999999988888899999999999 79999999999999999999887544433 3567899999999
Q ss_pred CCCcEEEEEEecCCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCcee
Q 038533 224 QDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMS 303 (337)
Q Consensus 224 ~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~ 303 (337)
++++|++++.|+. |++||+++ ++++..+.+|..+|.+++|+|+++ +|++|+.||.|++||++ . +.....
T Consensus 175 -dg~~lasg~~dg~-i~iwd~~~-~~~~~~~~~h~~~v~~l~~spd~~-~l~s~s~dg~i~iwd~~--~-----~~~~~~ 243 (321)
T 3ow8_A 175 -DGKYLASGAIDGI-INIFDIAT-GKLLHTLEGHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDVQ--H-----ANLAGT 243 (321)
T ss_dssp -TSSEEEEEETTSC-EEEEETTT-TEEEEEECCCSSCCCEEEECTTSC-EEEEECTTSCEEEEETT--T-----CCEEEE
T ss_pred -CCCEEEEEcCCCe-EEEEECCC-CcEEEEEcccCCceeEEEEcCCCC-EEEEEcCCCeEEEEECC--C-----cceeEE
Confidence 9999999999999 99999998 667888999999999999999999 99999999999999998 3 122446
Q ss_pred eeeCCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 304 MYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 304 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
+.+|...|.+++|+|+++.|++++.|+.|++|++
T Consensus 244 ~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~ 277 (321)
T 3ow8_A 244 LSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDV 277 (321)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeC
Confidence 7789999999999999999999999999999985
No 23
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.7e-41 Score=293.31 Aligned_cols=240 Identities=19% Similarity=0.325 Sum_probs=217.6
Q ss_pred CCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEE
Q 038533 67 FDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGT 144 (337)
Q Consensus 67 ~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 144 (337)
.+|..+|++++|+|++. +|++|+ | +|++||+.++ +....+.+|. ..|.+++|+| ++++|++
T Consensus 105 ~gh~~~V~~~~~~p~~~---------~l~s~s~Dg~i~vwd~~~~--~~~~~l~~h~-----~~V~~v~~~~-~~~~l~s 167 (410)
T 1vyh_C 105 SGHRSPVTRVIFHPVFS---------VMVSASEDATIKVWDYETG--DFERTLKGHT-----DSVQDISFDH-SGKLLAS 167 (410)
T ss_dssp ECCSSCEEEEEECSSSS---------EEEEEESSSCEEEEETTTC--CCCEEECCCS-----SCEEEEEECT-TSSEEEE
T ss_pred cccCCcEEEEEEcCCCC---------EEEEEeCCCeEEEEECCCC--cEEEEEeccC-----CcEEEEEEcC-CCCEEEE
Confidence 58999999999999998 888887 5 9999999998 6778899998 9999999999 9999999
Q ss_pred eeCCCcEEEEeCCCccchhhhhccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeec
Q 038533 145 CSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNK 223 (337)
Q Consensus 145 ~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~ 223 (337)
|+.|+.|++||+++++.+..+.+|...|.+++|+ ++++|++|+.|++|++||++++.....+. .|...+.++.|+|
T Consensus 168 gs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~---~h~~~v~~~~~~~ 244 (410)
T 1vyh_C 168 CSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT---GHREWVRMVRPNQ 244 (410)
T ss_dssp EETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE---CCSSCEEEEEECT
T ss_pred EeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe---CCCccEEEEEECC
Confidence 9999999999999999999999999999999999 68999999999999999999987554432 4678999999999
Q ss_pred CCCcEEEEEEecCCEEEEEECCCCCCCeEEeecccceeeEEEeCCC--------------------CCCeEEEEcCCCcE
Q 038533 224 QDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQ--------------------SRRHICSVGDDSQA 283 (337)
Q Consensus 224 ~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~--------------------~~~~l~~~~~dg~i 283 (337)
++.+|++++.|+. |++||+++ ......+..|...|.+++|+|+ +. +|++|+.|+.|
T Consensus 245 -~g~~l~s~s~D~~-v~vwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~sgs~D~~i 320 (410)
T 1vyh_C 245 -DGTLIASCSNDQT-VRVWVVAT-KECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGP-FLLSGSRDKTI 320 (410)
T ss_dssp -TSSEEEEEETTSC-EEEEETTT-CCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CC-EEEEEETTSEE
T ss_pred -CCCEEEEEcCCCe-EEEEECCC-CceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCC-EEEEEeCCCeE
Confidence 9999999999999 99999998 5677888999999999999996 55 89999999999
Q ss_pred EEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 284 FIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 284 ~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
++||++ + +.....+.+|...|.+++|+|++++|++++.|+.|++|++
T Consensus 321 ~iwd~~--~-----~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~ 367 (410)
T 1vyh_C 321 KMWDVS--T-----GMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367 (410)
T ss_dssp EEEETT--T-----TEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECC
T ss_pred EEEECC--C-----CceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 999998 3 2234567789999999999999999999999999999985
No 24
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=7.9e-41 Score=303.38 Aligned_cols=282 Identities=16% Similarity=0.241 Sum_probs=232.9
Q ss_pred eCCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEE
Q 038533 19 ESPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLAS 96 (337)
Q Consensus 19 ~~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~ 96 (337)
.|...|++++|+ |++||+|+. |+.|+||++......... . ...|.++|.+++|+|+++ +|++
T Consensus 57 ~h~~~v~~~~~spdg~~lasg~~----d~~v~lWd~~~~~~~~~~--~-~~~~~~~v~~v~fs~dg~---------~l~~ 120 (611)
T 1nr0_A 57 EHSHQTTVAKTSPSGYYCASGDV----HGNVRIWDTTQTTHILKT--T-IPVFSGPVKDISWDSESK---------RIAA 120 (611)
T ss_dssp CCSSCEEEEEECTTSSEEEEEET----TSEEEEEESSSTTCCEEE--E-EECSSSCEEEEEECTTSC---------EEEE
T ss_pred CCCCceEEEEECCCCcEEEEEeC----CCCEEEeECCCCcceeeE--e-ecccCCceEEEEECCCCC---------EEEE
Confidence 578899999999 999999997 999999998654433221 1 257899999999999998 7776
Q ss_pred eC-C-----eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCC-eEEEeeCCCcEEEEeCCCccchhhhhccC
Q 038533 97 SG-D-----FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPK-RIGTCSIDTTCTIWDIEKGVVETQLIAHD 169 (337)
Q Consensus 97 ~~-~-----~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~~~~~~~~~~ 169 (337)
++ + .|++|| .+ .....+.+|. ..|.+++|+| ++. .|++|+.|++|++||.++++.+..+.+|.
T Consensus 121 ~~~~~~~~~~v~~wd--~~--~~~~~l~gh~-----~~v~~v~f~p-~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~ 190 (611)
T 1nr0_A 121 VGEGRERFGHVFLFD--TG--TSNGNLTGQA-----RAMNSVDFKP-SRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHT 190 (611)
T ss_dssp EECCSSCSEEEEETT--TC--CBCBCCCCCS-----SCEEEEEECS-SSSCEEEEEETTSCEEEEETTTBEEEEEECCCS
T ss_pred EECCCCceeEEEEee--CC--CCcceecCCC-----CCceEEEECC-CCCeEEEEEeCCCeEEEEECCCCeEeeeecccc
Confidence 65 2 466666 44 3556788888 9999999999 665 69999999999999999988888899999
Q ss_pred CceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeec----CCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEEC
Q 038533 170 KEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYE----SPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDI 244 (337)
Q Consensus 170 ~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~ 244 (337)
..|.+++|+ ++++|++++.|++|++||+++++....+.. ...|...|.+++|+| ++++|++++.|+. |++||+
T Consensus 191 ~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~s~s~D~~-v~lWd~ 268 (611)
T 1nr0_A 191 KFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP-DGTKIASASADKT-IKIWNV 268 (611)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECT-TSSEEEEEETTSE-EEEEET
T ss_pred CceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECC-CCCEEEEEeCCCe-EEEEeC
Confidence 999999999 799999999999999999998875444322 115788999999999 9999999999998 999999
Q ss_pred CCCCC------------------------------------------CeEEeecccceeeEEEeCCCCCCeEEEEcCCCc
Q 038533 245 RSPTL------------------------------------------PVAELERHRACVNAIAWAPQSRRHICSVGDDSQ 282 (337)
Q Consensus 245 ~~~~~------------------------------------------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 282 (337)
++... +...+.+|...|++++|+|+++ +|++++.|+.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~-~l~s~s~D~~ 347 (611)
T 1nr0_A 269 ATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGK-TLFSADAEGH 347 (611)
T ss_dssp TTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSC
T ss_pred CCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCC-EEEEEeCCCc
Confidence 86321 1223457889999999999999 9999999999
Q ss_pred EEEEeCCCCCCCCCCCCCcee-eeeCCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 283 AFIWELPLPPVAGPNGIDPMS-MYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 283 i~iw~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
|++||+..+. .... ...|...|.+++|++++ .+++++.|+.+++|++
T Consensus 348 v~~Wd~~~~~-------~~~~~~~~h~~~v~~~~~s~~~-~l~s~s~d~~v~~w~~ 395 (611)
T 1nr0_A 348 INSWDISTGI-------SNRVFPDVHATMITGIKTTSKG-DLFTVSWDDHLKVVPA 395 (611)
T ss_dssp EEEEETTTCC-------EEECSSCSCSSCEEEEEECTTS-CEEEEETTTEEEEECS
T ss_pred EEEEECCCCc-------eeeecccCCcceEEEEEECCCC-cEEEEEcCCceEEeec
Confidence 9999998322 1111 24688999999999877 6999999999999974
No 25
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=5.3e-41 Score=283.07 Aligned_cols=289 Identities=15% Similarity=0.161 Sum_probs=229.8
Q ss_pred eCCCceeEEEEe---cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEE
Q 038533 19 ESPYPLYAMAVC---GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLA 95 (337)
Q Consensus 19 ~~~~~v~~~~~s---~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~ 95 (337)
.|.++|++++|+ +++||+|+. |++|+||++...............+|...|.+++|+|++. +|+
T Consensus 36 GH~~~V~~v~~sp~~~~~l~S~s~----D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~---------~l~ 102 (340)
T 4aow_A 36 GHNGWVTQIATTPQFPDMILSASR----DKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQ---------FAL 102 (340)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEET----TSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSS---------EEE
T ss_pred CccCCEEEEEEeCCCCCEEEEEcC----CCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCC---------EEE
Confidence 378999999999 579999997 9999999998654322111111368999999999999998 888
Q ss_pred EeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccc-hhhhhccCCce
Q 038533 96 SSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVV-ETQLIAHDKEV 172 (337)
Q Consensus 96 ~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~-~~~~~~~~~~v 172 (337)
+++ | .|++|+.... ........+. ..+..+.+++ ++++|++|+.|+.+++||+..... .....+|...+
T Consensus 103 s~~~d~~i~~~~~~~~--~~~~~~~~~~-----~~~~~~~~~~-~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v 174 (340)
T 4aow_A 103 SGSWDGTLRLWDLTTG--TTTRRFVGHT-----KDVLSVAFSS-DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV 174 (340)
T ss_dssp EEETTSEEEEEETTTT--EEEEEEECCS-----SCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCE
T ss_pred EEcccccceEEeeccc--ceeeeecCCC-----CceeEEEEee-cCccceeecCCCeEEEEEeCCCceEEEEeccccCcc
Confidence 877 5 9999999988 5555666665 7888999998 899999999999999999876543 34456789999
Q ss_pred eEEEeC-C--CcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCC
Q 038533 173 YDICWG-E--ARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTL 249 (337)
Q Consensus 173 ~~~~~~-~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~ 249 (337)
..++|+ + ..++++++.|+.|++||+++.+....+ ..|...|.+++|+| ++++|++++.|+. |++||+++ ..
T Consensus 175 ~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~---~~h~~~v~~~~~s~-~~~~l~s~s~Dg~-i~iwd~~~-~~ 248 (340)
T 4aow_A 175 SCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH---IGHTGYLNTVTVSP-DGSLCASGGKDGQ-AMLWDLNE-GK 248 (340)
T ss_dssp EEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEE---CCCSSCEEEEEECT-TSSEEEEEETTCE-EEEEETTT-TE
T ss_pred cceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEe---cCCCCcEEEEEECC-CCCEEEEEeCCCe-EEEEEecc-Cc
Confidence 999998 3 567899999999999999988744333 34778999999999 9999999999998 99999998 55
Q ss_pred CeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCC--CCCceeeeeCCCceeEEEEccCCCceEEEE
Q 038533 250 PVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPN--GIDPMSMYSAGSEINQLQWSPAQPDWLAIA 327 (337)
Q Consensus 250 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 327 (337)
++..+.. ...+.+++|+|++. +++++.|+.|++||++........ .........|...|++++|+|++++|++++
T Consensus 249 ~~~~~~~-~~~v~~~~~~~~~~--~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs 325 (340)
T 4aow_A 249 HLYTLDG-GDIINALCFSPNRY--WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGY 325 (340)
T ss_dssp EEEEEEC-SSCEEEEEECSSSS--EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEE
T ss_pred eeeeecC-CceEEeeecCCCCc--eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEe
Confidence 6666664 46899999999875 566677999999999832211000 011123446889999999999999999999
Q ss_pred cCCcEEEEeC
Q 038533 328 FSNKMQLLKV 337 (337)
Q Consensus 328 ~d~~i~iw~l 337 (337)
.||.|+||++
T Consensus 326 ~Dg~v~iW~~ 335 (340)
T 4aow_A 326 TDNLVRVWQV 335 (340)
T ss_dssp TTSCEEEEEE
T ss_pred CCCEEEEEeC
Confidence 9999999985
No 26
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3.4e-41 Score=279.09 Aligned_cols=249 Identities=20% Similarity=0.308 Sum_probs=206.1
Q ss_pred CCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecC-CCCeEE
Q 038533 67 FDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEI-EPKRIG 143 (337)
Q Consensus 67 ~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~ 143 (337)
.+|.+.|.+++|+|+++ +||+|+ | +|+|||+.+...+++..+.+|. .+|.+++|++. ++++|+
T Consensus 6 ~~h~~~V~~~~~s~~g~---------~las~s~D~~v~iw~~~~~~~~~~~~l~gH~-----~~V~~v~~s~~~~g~~l~ 71 (297)
T 2pm7_B 6 NAHNEMIHDAVMDYYGK---------RMATCSSDKTIKIFEVEGETHKLIDTLTGHE-----GPVWRVDWAHPKFGTILA 71 (297)
T ss_dssp CSCSSCEEEEEECTTSS---------EEEEEETTSCEEEEEBCSSCBCCCEEECCCS-----SCEEEEEECCGGGCSEEE
T ss_pred cCCcCceEEEEECCCCC---------EEEEEeCCCEEEEEecCCCCcEEEEEEcccc-----CCeEEEEecCCCcCCEEE
Confidence 68999999999999999 888887 5 9999999865446778899998 99999999862 378999
Q ss_pred EeeCCCcEEEEeCCCcc--chhhhhccCCceeEEEeCC---CcEEEEEcCCCeEEEEECCCCCCc-eeeecCCCCCCCce
Q 038533 144 TCSIDTTCTIWDIEKGV--VETQLIAHDKEVYDICWGE---ARVFASVSADGSVRIFDLRDKEHS-TIIYESPQPDTPLL 217 (337)
Q Consensus 144 ~~~~dg~i~v~d~~~~~--~~~~~~~~~~~v~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~i~ 217 (337)
+|+.|++|++||+++++ .+..+..|...|.+++|+| +.+|++++.|+.|++||++..... ..... .|...+.
T Consensus 72 s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~--~h~~~v~ 149 (297)
T 2pm7_B 72 SCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIID--AHAIGVN 149 (297)
T ss_dssp EEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEE--CCSSCEE
T ss_pred EEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeee--cccCccc
Confidence 99999999999998874 4556678999999999993 689999999999999999876422 22222 4778999
Q ss_pred EEEeecC------------CCcEEEEEEecCCEEEEEECCCCCC---CeEEeecccceeeEEEeCCCC---CCeEEEEcC
Q 038533 218 RLAWNKQ------------DLRYMATILMDSNKVVILDIRSPTL---PVAELERHRACVNAIAWAPQS---RRHICSVGD 279 (337)
Q Consensus 218 ~~~~~~~------------~~~~l~~~~~d~~~i~i~d~~~~~~---~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~ 279 (337)
+++|+|. ++++|++++.|+. |++||++.... ....+.+|...|.+++|+|++ . +|++++.
T Consensus 150 ~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~-v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~-~las~s~ 227 (297)
T 2pm7_B 150 SASWAPATIEEDGEHNGTKESRKFVTGGADNL-VKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS-YMASVSQ 227 (297)
T ss_dssp EEEECCCC------------CCEEEEEETTSC-EEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE-EEEEEET
T ss_pred eEeecCCcccccccCCCCCCcceEEEEcCCCc-EEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCce-EEEEEEC
Confidence 9999983 1579999999999 99999987432 456788999999999999985 5 9999999
Q ss_pred CCcEEEEeCCCCCCCCCCCCCceee--eeCCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 280 DSQAFIWELPLPPVAGPNGIDPMSM--YSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 280 dg~i~iw~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
|++|++||++..... .....+ ..|...|.+++|+|+++.|++++.|+.|+||++
T Consensus 228 D~~v~iWd~~~~~~~----~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~ 283 (297)
T 2pm7_B 228 DRTCIIWTQDNEQGP----WKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 283 (297)
T ss_dssp TSCEEEEEESSTTSC----CEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEE
T ss_pred CCcEEEEEeCCCCCc----cceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEE
Confidence 999999999832110 001122 457889999999999999999999999999973
No 27
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.9e-41 Score=294.36 Aligned_cols=284 Identities=17% Similarity=0.130 Sum_probs=219.3
Q ss_pred eCCCceeEEEEe---cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCC-CCcccCcCCccEE
Q 038533 19 ESPYPLYAMAVC---GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPN-SSSRKSSSNRHLL 94 (337)
Q Consensus 19 ~~~~~v~~~~~s---~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~-~~~~~~~~~~~~l 94 (337)
.+...|+|++|+ +++||+|+. ||.|+||++......... . ..+|.+.|++|+|+|. +. +|
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~----dg~i~lWd~~~~~~~~~~--~-~~gH~~~V~~l~f~p~~~~---------~l 180 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSK----GGDIMLWNFGIKDKPTFI--K-GIGAGGSITGLKFNPLNTN---------QF 180 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEET----TSCEEEECSSCCSCCEEE--C-CCSSSCCCCEEEECSSCTT---------EE
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeC----CCEEEEEECCCCCceeEE--E-ccCCCCCEEEEEEeCCCCC---------EE
Confidence 457789999998 679999997 999999998866544332 2 2689999999999984 55 88
Q ss_pred EEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCce
Q 038533 95 ASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEV 172 (337)
Q Consensus 95 ~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v 172 (337)
++|+ | +|++||++++..........+. ..+.+++|+| ++.+|++|+.||.|++||++ ++.+..+.+|...|
T Consensus 181 ~s~s~D~~v~iwd~~~~~~~~~~~~~~~~-----~~~~~~~~~~-~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v 253 (435)
T 4e54_B 181 YASSMEGTTRLQDFKGNILRVFASSDTIN-----IWFCSLDVSA-SSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKV 253 (435)
T ss_dssp EEECSSSCEEEEETTSCEEEEEECCSSCS-----CCCCCEEEET-TTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCE
T ss_pred EEEeCCCEEEEeeccCCceeEEeccCCCC-----ccEEEEEECC-CCCEEEEEeCCCcEeeeccC-cceeEEEecccceE
Confidence 8888 6 9999999876322222222222 5688999999 99999999999999999986 45677888999999
Q ss_pred eEEEeC-C-CcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCC
Q 038533 173 YDICWG-E-ARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLP 250 (337)
Q Consensus 173 ~~~~~~-~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~ 250 (337)
.+++|+ . ..++++++.|+.|++||+++.+....+.....|...|.+++|+| ++.+|++++.|+. |++||+++ ...
T Consensus 254 ~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~sp-dg~~l~s~~~D~~-i~iwd~~~-~~~ 330 (435)
T 4e54_B 254 THVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSP-DGARLLTTDQKSE-IRVYSASQ-WDC 330 (435)
T ss_dssp EEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCT-TSSEEEEEESSSC-EEEEESSS-SSS
T ss_pred EeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECC-CCCeeEEEcCCCE-EEEEECCC-Ccc
Confidence 999999 4 45788999999999999998876555555456889999999999 9999999999999 99999998 444
Q ss_pred eEEeecccc------eeeEEEeCCCCCCeEEEEc------------CCCcEEEEeCCCCCCCCCCCCCcee-eeeCCCce
Q 038533 251 VAELERHRA------CVNAIAWAPQSRRHICSVG------------DDSQAFIWELPLPPVAGPNGIDPMS-MYSAGSEI 311 (337)
Q Consensus 251 ~~~~~~~~~------~v~~~~~~~~~~~~l~~~~------------~dg~i~iw~~~~~~~~~~~~~~~~~-~~~~~~~v 311 (337)
...+..|.. .+....|+|++. ++++++ .++.|++||...+. .... ..+|...|
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~-------~~~~l~~~~~~~v 402 (435)
T 4e54_B 331 PLGLIPHPHRHFQHLTPIKAAWHPRYN-LIVVGRYPDPNFKSCTPYELRTIDVFDGNSGK-------MMCQLYDPESSGI 402 (435)
T ss_dssp EEEECCCCCCCCSSSCCCBCEECSSSS-CEEEECCCCTTSCCSSTTCCCCEEEECSSSCC-------EEEEECCSSCCCC
T ss_pred ceEEecccccccccceeEEEEEcCCCC-EEEEEEcCCCCeEEEEecCCCEEEEEECCCCc-------EEEEEeCCCCCcE
Confidence 555544432 234456777766 555543 34679999998322 1222 33678888
Q ss_pred eEE-EEccCCCceEEEEcCCcEEEEeC
Q 038533 312 NQL-QWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 312 ~~~-~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
.++ +|+|+|++|++ +.|+.|+||++
T Consensus 403 ~s~~~fspdg~~las-g~d~~i~iW~~ 428 (435)
T 4e54_B 403 SSLNEFNPMGDTLAS-AMGYHILIWSQ 428 (435)
T ss_dssp CCEEEECTTSSCEEE-ECSSEEEECCC
T ss_pred EEEEEECCCCCEEEE-EcCCcEEEEEC
Confidence 887 69999986665 45889999985
No 28
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=5.6e-41 Score=286.45 Aligned_cols=291 Identities=16% Similarity=0.201 Sum_probs=233.1
Q ss_pred CCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEe
Q 038533 20 SPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASS 97 (337)
Q Consensus 20 ~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~ 97 (337)
|..+|++++|+ +++||+|+. |+.|++|+++........ .+ ..|...|.+++|+|++. +|+++
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~----d~~v~i~~~~~~~~~~~~--~~-~~h~~~v~~~~~~~~~~---------~l~~~ 70 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPN----NHEVHIYEKSGNKWVQVH--EL-KEHNGQVTGVDWAPDSN---------RIVTC 70 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECS----SSEEEEEEEETTEEEEEE--EE-ECCSSCEEEEEEETTTT---------EEEEE
T ss_pred cCCCeEEEEECCCCCEEEEEeC----CCEEEEEeCCCCcEEeee--ee-cCCCCcccEEEEeCCCC---------EEEEE
Confidence 67899999999 889999986 999999999866421221 22 57999999999999998 88887
Q ss_pred C-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccc----hhhhhccCCc
Q 038533 98 G-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVV----ETQLIAHDKE 171 (337)
Q Consensus 98 ~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~----~~~~~~~~~~ 171 (337)
+ | .|++||+.+++......+..|. ..|.+++|+| ++++|++++.||.|++||++.++. ......|...
T Consensus 71 ~~dg~i~vwd~~~~~~~~~~~~~~~~-----~~v~~~~~~~-~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~ 144 (372)
T 1k8k_C 71 GTDRNAYVWTLKGRTWKPTLVILRIN-----RAARCVRWAP-NEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRST 144 (372)
T ss_dssp ETTSCEEEEEEETTEEEEEEECCCCS-----SCEEEEEECT-TSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSC
T ss_pred cCCCeEEEEECCCCeeeeeEEeecCC-----CceeEEEECC-CCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCC
Confidence 6 5 9999999888544445556676 8999999999 999999999999999999988763 2233568899
Q ss_pred eeEEEeC-CCcEEEEEcCCCeEEEEECCCCC---------------CceeeecCCCCCCCceEEEeecCCCcEEEEEEec
Q 038533 172 VYDICWG-EARVFASVSADGSVRIFDLRDKE---------------HSTIIYESPQPDTPLLRLAWNKQDLRYMATILMD 235 (337)
Q Consensus 172 v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~---------------~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d 235 (337)
|.+++|+ ++++|++++.||.|++||++... ..........|...+.+++|+| ++.+|++++.|
T Consensus 145 i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d 223 (372)
T 1k8k_C 145 VLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSA-NGSRVAWVSHD 223 (372)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECS-SSSEEEEEETT
T ss_pred eeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECC-CCCEEEEEeCC
Confidence 9999999 78899999999999999975211 1122233335778999999999 99999999999
Q ss_pred CCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCC--CCCC-------------------
Q 038533 236 SNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPL--PPVA------------------- 294 (337)
Q Consensus 236 ~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~--~~~~------------------- 294 (337)
+. |++||+++ .+++..+..|..+|.+++|+|++. +|+++ .|+.|++|+++. ++..
T Consensus 224 ~~-i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (372)
T 1k8k_C 224 ST-VCLADADK-KMAVATLASETLPLLAVTFITESS-LVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTAR 299 (372)
T ss_dssp TE-EEEEEGGG-TTEEEEEECSSCCEEEEEEEETTE-EEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHH
T ss_pred CE-EEEEECCC-CceeEEEccCCCCeEEEEEecCCC-EEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchh
Confidence 98 99999998 667888999999999999999998 88877 899999999984 1100
Q ss_pred ------CCCCCCc------eee-eeCCCceeEEEEc-cCC---CceEEEEcCCcEEEEeC
Q 038533 295 ------GPNGIDP------MSM-YSAGSEINQLQWS-PAQ---PDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 295 ------~~~~~~~------~~~-~~~~~~v~~~~~~-~~~---~~l~~~~~d~~i~iw~l 337 (337)
...+... ..+ .+|..+|++++|+ +++ +.|++++.||.|++|++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~ 359 (372)
T 1k8k_C 300 ERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDV 359 (372)
T ss_dssp HHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEH
T ss_pred hhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEe
Confidence 0001111 222 4899999999977 565 88999999999999984
No 29
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=3.5e-41 Score=286.90 Aligned_cols=295 Identities=12% Similarity=0.162 Sum_probs=234.1
Q ss_pred eCCCceeEEEEe------cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCcc
Q 038533 19 ESPYPLYAMAVC------GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRH 92 (337)
Q Consensus 19 ~~~~~v~~~~~s------~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~ 92 (337)
.|..+|++++|+ ...+++++. ++.|+||++................|...|.+++|+|++. ..+.
T Consensus 16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~----~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-----~~~~ 86 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSKEGDPLVFATVG----SNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSN-----TSHP 86 (366)
T ss_dssp TTCSCEEEEEECTTCCTTSCEEEEEEE----TTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTT-----TCCE
T ss_pred CCCCceEEEEEecccCCCCceEEEECC----CCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCC-----CCCC
Confidence 478999999998 233555554 8899999998654322221111234788999999999932 0012
Q ss_pred EEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhh---hc
Q 038533 93 LLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQL---IA 167 (337)
Q Consensus 93 ~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~---~~ 167 (337)
+|++++ + .|++||+.++ +.+..+.+|. ..|.+++|+|.++++|++|+.||.|++||+++++.+..+ ..
T Consensus 87 ~l~~~~~dg~i~v~d~~~~--~~~~~~~~~~-----~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 159 (366)
T 3k26_A 87 LLAVAGSRGIIRIINPITM--QCIKHYVGHG-----NAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEG 159 (366)
T ss_dssp EEEEEETTCEEEEECTTTC--CEEEEEESCC-----SCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTS
T ss_pred EEEEecCCCEEEEEEchhc--eEeeeecCCC-----CcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEeccccc
Confidence 777776 5 9999999988 6778888888 999999999867899999999999999999999887776 68
Q ss_pred cCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceee-------------------------ecCCCCCCCceEEEe
Q 038533 168 HDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTII-------------------------YESPQPDTPLLRLAW 221 (337)
Q Consensus 168 ~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~-------------------------~~~~~~~~~i~~~~~ 221 (337)
|...|.+++|+ ++++|++++.||.|++||+++.+....+ .....|...|.+++|
T Consensus 160 ~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 239 (366)
T 3k26_A 160 HRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRW 239 (366)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEE
T ss_pred ccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEE
Confidence 99999999999 7899999999999999999876432211 111226789999999
Q ss_pred ecCCCcEEEEEEecCCEEEEEECCCCCC-------------CeEEeecccceeeEEEeCCC--CCCeEEEEcCCCcEEEE
Q 038533 222 NKQDLRYMATILMDSNKVVILDIRSPTL-------------PVAELERHRACVNAIAWAPQ--SRRHICSVGDDSQAFIW 286 (337)
Q Consensus 222 ~~~~~~~l~~~~~d~~~i~i~d~~~~~~-------------~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~dg~i~iw 286 (337)
+ ++++++++.|+. |++||+++... .+..+..|...|.+++|+|+ +. +|++|+.||.|++|
T Consensus 240 ~---~~~l~~~~~d~~-i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~-~l~~~~~dg~i~vw 314 (366)
T 3k26_A 240 L---GDLILSKSCENA-IVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQK-MLALGNQVGKLYVW 314 (366)
T ss_dssp E---TTEEEEECSSSE-EEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSS-EEEEECTTSCEEEE
T ss_pred c---CCEEEEEecCCE-EEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCc-EEEEEecCCcEEEE
Confidence 7 579999999998 99999987432 26677788899999999999 88 99999999999999
Q ss_pred eCCCCCCCCCCCCCceeeeeC--CCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 287 ELPLPPVAGPNGIDPMSMYSA--GSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
|+..+... ......+..| ...|.+++|+|+++.|++++.||.|++|++
T Consensus 315 d~~~~~~~---~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 315 DLEVEDPH---KAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDR 364 (366)
T ss_dssp ECCSSSGG---GCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred ECCCCCCc---cccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEe
Confidence 99832211 0112245556 789999999999999999999999999986
No 30
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.5e-40 Score=278.51 Aligned_cols=281 Identities=15% Similarity=0.173 Sum_probs=234.9
Q ss_pred eeeeCCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccE
Q 038533 16 VTHESPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHL 93 (337)
Q Consensus 16 ~~~~~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~ 93 (337)
....|..+|++++|+ +++||+|+. ||.|++|++......... ..|...|.+++|+|++. +
T Consensus 27 ~l~~h~~~v~~~~~s~~~~~l~~~~~----dg~i~vwd~~~~~~~~~~-----~~h~~~v~~~~~~~~~~---------~ 88 (369)
T 3zwl_B 27 KLTGHERPLTQVKYNKEGDLLFSCSK----DSSASVWYSLNGERLGTL-----DGHTGTIWSIDVDCFTK---------Y 88 (369)
T ss_dssp EEECCSSCEEEEEECTTSCEEEEEES----SSCEEEEETTTCCEEEEE-----CCCSSCEEEEEECTTSS---------E
T ss_pred EEEEeeceEEEEEEcCCCCEEEEEeC----CCEEEEEeCCCchhhhhh-----hhcCCcEEEEEEcCCCC---------E
Confidence 334578999999999 899999997 999999998765544333 67999999999999998 8
Q ss_pred EEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCC-----CcEEEEeCCCccc-----
Q 038533 94 LASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSID-----TTCTIWDIEKGVV----- 161 (337)
Q Consensus 94 l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-----g~i~v~d~~~~~~----- 161 (337)
|++++ | .|++||+.++ +....+. +. ..|.+++|+| +++++++++.+ |.|++||++....
T Consensus 89 l~s~~~dg~i~iwd~~~~--~~~~~~~-~~-----~~v~~~~~~~-~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~ 159 (369)
T 3zwl_B 89 CVTGSADYSIKLWDVSNG--QCVATWK-SP-----VPVKRVEFSP-CGNYFLAILDNVMKNPGSINIYEIERDSATHELT 159 (369)
T ss_dssp EEEEETTTEEEEEETTTC--CEEEEEE-CS-----SCEEEEEECT-TSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEE
T ss_pred EEEEeCCCeEEEEECCCC--cEEEEee-cC-----CCeEEEEEcc-CCCEEEEecCCccCCCCEEEEEEecCCccceeec
Confidence 88776 5 9999999998 4555665 54 8899999999 99999999999 9999999987653
Q ss_pred ------hhhhhccCC--ceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEE
Q 038533 162 ------ETQLIAHDK--EVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 232 (337)
Q Consensus 162 ------~~~~~~~~~--~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 232 (337)
+..+..|.. .+.+++|+ ++++|++++.||.|++||+++......... .|...+.+++|+| ++.+|+++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~~~ 236 (369)
T 3zwl_B 160 KVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSID--LHEKSISDMQFSP-DLTYFITS 236 (369)
T ss_dssp EECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEE--CCSSCEEEEEECT-TSSEEEEE
T ss_pred ccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEe--cCCCceeEEEECC-CCCEEEEe
Confidence 223334554 89999999 788999999999999999998433333333 3678999999999 99999999
Q ss_pred EecCCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCC--------------cEEEEeCCCCCCCCCCC
Q 038533 233 LMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDS--------------QAFIWELPLPPVAGPNG 298 (337)
Q Consensus 233 ~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg--------------~i~iw~~~~~~~~~~~~ 298 (337)
+.|+. |++||+++ ...+..+. +...+.+++|+|+++ ++++++.++ .+++||+. . +
T Consensus 237 ~~d~~-i~v~d~~~-~~~~~~~~-~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~--~-----~ 305 (369)
T 3zwl_B 237 SRDTN-SFLVDVST-LQVLKKYE-TDCPLNTAVITPLKE-FIILGGGQEAKDVTTTSANEGKFEARFYHKI--F-----E 305 (369)
T ss_dssp ETTSE-EEEEETTT-CCEEEEEE-CSSCEEEEEECSSSS-EEEEEECCC-------------CEEEEEETT--T-----C
T ss_pred cCCce-EEEEECCC-Cceeeeec-CCCCceeEEecCCCc-eEEEeecCCCceEEEEecCCCcceeEEEecC--C-----C
Confidence 99998 99999998 55666666 778999999999999 999998888 89999998 3 2
Q ss_pred CCceeeeeCCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 299 IDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 299 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
.....+.+|...|.+++|+|+++.|++++.||.|++|++
T Consensus 306 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~ 344 (369)
T 3zwl_B 306 EEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHF 344 (369)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEE
T ss_pred cchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 234467789999999999999999999999999999985
No 31
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.3e-41 Score=286.17 Aligned_cols=292 Identities=18% Similarity=0.350 Sum_probs=231.1
Q ss_pred eCCCceeEEEEe--cceE-EEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCC---CCcccCcCCcc
Q 038533 19 ESPYPLYAMAVC--GQRI-AVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPN---SSSRKSSSNRH 92 (337)
Q Consensus 19 ~~~~~v~~~~~s--~~~l-a~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~---~~~~~~~~~~~ 92 (337)
.|..+|++++|+ +..| ++|+. ...|+.|+||+++........ ..+|...|.+++|+|+ +.
T Consensus 16 ~h~~~v~~~~~~p~~~~l~~~~s~-~~~d~~v~iw~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~~--------- 81 (357)
T 3i2n_A 16 GFNYTVFDCKWVPCSAKFVTMGNF-ARGTGVIQLYEIQHGDLKLLR----EIEKAKPIKCGTFGATSLQQR--------- 81 (357)
T ss_dssp ECSSCEEEEEECTTSSEEEEEEC---CCCEEEEEEEECSSSEEEEE----EEEESSCEEEEECTTCCTTTC---------
T ss_pred CCCCceEEEEEcCCCceEEEecCc-cCCCcEEEEEeCCCCccccee----eecccCcEEEEEEcCCCCCCc---------
Confidence 478999999999 5444 45541 112899999999866543332 2478999999999999 46
Q ss_pred EEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEe------ecCCCCeEEEeeCCCcEEEEeCCCcc-chh
Q 038533 93 LLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDW------NEIEPKRIGTCSIDTTCTIWDIEKGV-VET 163 (337)
Q Consensus 93 ~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~------~~~~~~~l~~~~~dg~i~v~d~~~~~-~~~ 163 (337)
+|++++ + .|++||+.+++ .....+.+|. ..|.+++| +| ++++|++++.||.|++||+++++ .+.
T Consensus 82 ~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~-----~~v~~~~~~~~~~~s~-~~~~l~~~~~d~~i~vwd~~~~~~~~~ 154 (357)
T 3i2n_A 82 YLATGDFGGNLHIWNLEAPE-MPVYSVKGHK-----EIINAIDGIGGLGIGE-GAPEIVTGSRDGTVKVWDPRQKDDPVA 154 (357)
T ss_dssp CEEEEETTSCEEEECTTSCS-SCSEEECCCS-----SCEEEEEEESGGGCC--CCCEEEEEETTSCEEEECTTSCSSCSE
T ss_pred eEEEecCCCeEEEEeCCCCC-ccEEEEEecc-----cceEEEeeccccccCC-CccEEEEEeCCCeEEEEeCCCCCCcce
Confidence 777776 5 99999999884 2677888888 99999965 56 88999999999999999999887 566
Q ss_pred hhhccCC----ceeEEE----eC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecC--CCcEEEEE
Q 038533 164 QLIAHDK----EVYDIC----WG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQ--DLRYMATI 232 (337)
Q Consensus 164 ~~~~~~~----~v~~~~----~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~l~~~ 232 (337)
.+..|.+ .+.+++ |+ +++++++++.||.|++||+++.+..... .+...+.+++|+|. ++.+|+++
T Consensus 155 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~l~~~ 230 (357)
T 3i2n_A 155 NMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWET----NIKNGVCSLEFDRKDISMNKLVAT 230 (357)
T ss_dssp EECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEE----ECSSCEEEEEESCSSSSCCEEEEE
T ss_pred eccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeec----CCCCceEEEEcCCCCCCCCEEEEE
Confidence 6655544 788888 66 6899999999999999999988753332 35689999999985 68899999
Q ss_pred EecCCEEEEEECCCCCCCeEEe-----ecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCC---CC------
Q 038533 233 LMDSNKVVILDIRSPTLPVAEL-----ERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGP---NG------ 298 (337)
Q Consensus 233 ~~d~~~i~i~d~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~---~~------ 298 (337)
+.|+. |++||+++ ..++..+ ..|...|.+++|+|+++.+|++++.||.|++||++.+..... .+
T Consensus 231 ~~dg~-i~i~d~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~ 308 (357)
T 3i2n_A 231 SLEGK-FHVFDMRT-QHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVA 308 (357)
T ss_dssp ESTTE-EEEEEEEE-EETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCC
T ss_pred CCCCe-EEEEeCcC-CCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccc
Confidence 99998 99999987 3334444 389999999999999876799999999999999984322110 00
Q ss_pred ---CCceeeeeCCCceeEEEEccCCCceE-EEEcCCcEEEEeC
Q 038533 299 ---IDPMSMYSAGSEINQLQWSPAQPDWL-AIAFSNKMQLLKV 337 (337)
Q Consensus 299 ---~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iw~l 337 (337)
.....+..|...|.+++|+|+++.|+ +++.|+.|+||++
T Consensus 309 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~ 351 (357)
T 3i2n_A 309 GSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIV 351 (357)
T ss_dssp CEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred cccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEEC
Confidence 12335667999999999999999998 7889999999985
No 32
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=8.5e-41 Score=286.70 Aligned_cols=283 Identities=13% Similarity=0.100 Sum_probs=221.2
Q ss_pred eCCCceeEEEEe--c-ceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecC-CCCcccCcCCccEE
Q 038533 19 ESPYPLYAMAVC--G-QRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDP-NSSSRKSSSNRHLL 94 (337)
Q Consensus 19 ~~~~~v~~~~~s--~-~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~-~~~~~~~~~~~~~l 94 (337)
.|...|++++|+ + ++||+|+. ||.|+||++......... . ..+|...|.+++|+| ++. +|
T Consensus 71 ~h~~~v~~~~~~~~~~~~l~s~~~----dg~i~iwd~~~~~~~~~~--~-~~~h~~~v~~~~~~~~~~~---------~l 134 (383)
T 3ei3_B 71 PFDRRVTSLEWHPTHPTTVAVGSK----GGDIILWDYDVQNKTSFI--Q-GMGPGDAITGMKFNQFNTN---------QL 134 (383)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEEB----TSCEEEEETTSTTCEEEE--C-CCSTTCBEEEEEEETTEEE---------EE
T ss_pred CCCCCEEEEEECCCCCCEEEEEcC----CCeEEEEeCCCcccceee--e-cCCcCCceeEEEeCCCCCC---------EE
Confidence 467899999999 5 79999997 999999999866554433 1 147999999999999 555 77
Q ss_pred EEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCce
Q 038533 95 ASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEV 172 (337)
Q Consensus 95 ~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v 172 (337)
++++ | .|++||+.+. ....+..+. .+...|.+++|+| ++++|++|+.|+.|++||+ +++.+..+..|...|
T Consensus 135 ~s~~~d~~i~iwd~~~~---~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v 207 (383)
T 3ei3_B 135 FVSSIRGATTLRDFSGS---VIQVFAKTD--SWDYWYCCVDVSV-SRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKV 207 (383)
T ss_dssp EEEETTTEEEEEETTSC---EEEEEECCC--CSSCCEEEEEEET-TTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCE
T ss_pred EEEeCCCEEEEEECCCC---ceEEEeccC--CCCCCeEEEEECC-CCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcE
Confidence 7776 5 9999999975 333343322 1227899999999 9999999999999999999 567788888999999
Q ss_pred eEEEeC-CCc-EEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCC
Q 038533 173 YDICWG-EAR-VFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLP 250 (337)
Q Consensus 173 ~~~~~~-~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~ 250 (337)
.+++|+ ++. ++++++.|+.|++||+++.+..........|...+.+++|+|.++.+|++++.|+. |++||+++. ..
T Consensus 208 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~-i~iwd~~~~-~~ 285 (383)
T 3ei3_B 208 THAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNE-IRVYSSYDW-SK 285 (383)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSE-EEEEETTBT-TS
T ss_pred EEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCc-EEEEECCCC-cc
Confidence 999999 566 89999999999999999843221111111367899999999878899999999998 999999984 34
Q ss_pred eEEeeccc-----------------ceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeee--CCCce
Q 038533 251 VAELERHR-----------------ACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYS--AGSEI 311 (337)
Q Consensus 251 ~~~~~~~~-----------------~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~--~~~~v 311 (337)
...+..|. ..+..++|+|+++ + +++.||.|++||+..++ ....+.+ |...+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~-~--s~s~d~~i~iwd~~~~~-------~~~~l~~~~~~~~~ 355 (383)
T 3ei3_B 286 PDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQ-L--LLNDKRTIDIYDANSGG-------LVHQLRDPNAAGII 355 (383)
T ss_dssp CSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTT-T--CTTCCCCEEEEETTTCC-------EEEEECBTTBCSCC
T ss_pred ccccccccccccccccceEEeccCCCCceEEEecCCcc-c--ccCCCCeEEEEecCCCc-------eeeeecCCCCCceE
Confidence 45555442 2344467777776 4 78899999999998322 2334444 56778
Q ss_pred eEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 312 NQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 312 ~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
..++|+|+++.|++++ |+.|+||++
T Consensus 356 ~~~~~s~~g~~l~s~s-d~~i~iw~~ 380 (383)
T 3ei3_B 356 SLNKFSPTGDVLASGM-GFNILIWNR 380 (383)
T ss_dssp CEEEECTTSSEEEEEE-TTEEEEEEC
T ss_pred EEEEEecCccEEEEec-CCcEEEEec
Confidence 8889999998887776 999999986
No 33
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-41 Score=294.32 Aligned_cols=293 Identities=17% Similarity=0.300 Sum_probs=236.6
Q ss_pred eeCCCceeEEEEe--cc-eEEEeeeec------cCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCc
Q 038533 18 HESPYPLYAMAVC--GQ-RIAVGSFIE------DYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSS 88 (337)
Q Consensus 18 ~~~~~~v~~~~~s--~~-~la~g~~~~------~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~ 88 (337)
+.+..+|.+++|+ ++ +||+|+..+ +.|+.|+||++........ .....|...|.+++|+|++.
T Consensus 9 l~~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~---~~~~~~~~~v~~~~~s~~~~----- 80 (416)
T 2pm9_A 9 LAEFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKP---IASLQVDSKFNDLDWSHNNK----- 80 (416)
T ss_dssp -CEEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSC---SCCCCCSSCEEEEEECSSSS-----
T ss_pred HhhhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcE---EEEEecCCceEEEEECCCCC-----
Confidence 3444679999999 55 899983211 2399999999876543211 11257899999999999998
Q ss_pred CCccEEEEeC-C-eEEEEecCCC--CccceeeecCCCCCcccCCeeEEEeecCC-CCeEEEeeCCCcEEEEeCCCcc---
Q 038533 89 SNRHLLASSG-D-FLRLWDVGDS--SIEPVAVLNNSKSSEFCAPLTSFDWNEIE-PKRIGTCSIDTTCTIWDIEKGV--- 160 (337)
Q Consensus 89 ~~~~~l~~~~-~-~v~vw~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~dg~i~v~d~~~~~--- 160 (337)
+|++++ + .|++|++.+. .......+.+|. ..|.+++|+| + +++|++++.||.|++||+++++
T Consensus 81 ----~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~-----~~v~~~~~~~-~~~~~l~s~~~dg~v~iwd~~~~~~~~ 150 (416)
T 2pm9_A 81 ----IIAGALDNGSLELYSTNEANNAINSMARFSNHS-----SSVKTVKFNA-KQDNVLASGGNNGEIFIWDMNKCTESP 150 (416)
T ss_dssp ----CEEEEESSSCEEEECCSSTTSCCCEEEECCCSS-----SCCCEEEECS-SSTTBEEEECSSSCEEBCBTTTTSSCT
T ss_pred ----eEEEEccCCeEEEeecccccccccchhhccCCc-----cceEEEEEcC-CCCCEEEEEcCCCeEEEEECCCCcccc
Confidence 888876 5 9999999872 124677788888 9999999999 6 8999999999999999999876
Q ss_pred ---chh---hhhccCCceeEEEeC-C-CcEEEEEcCCCeEEEEECCCCCCceeeecCC---CCCCCceEEEeecCCCcEE
Q 038533 161 ---VET---QLIAHDKEVYDICWG-E-ARVFASVSADGSVRIFDLRDKEHSTIIYESP---QPDTPLLRLAWNKQDLRYM 229 (337)
Q Consensus 161 ---~~~---~~~~~~~~v~~~~~~-~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~l 229 (337)
... .+..|...|.+++|+ + +.+|++++.||.|++||+++.+....+.... .|...+.+++|+|....++
T Consensus 151 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 230 (416)
T 2pm9_A 151 SNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRV 230 (416)
T ss_dssp TTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEE
T ss_pred ccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEE
Confidence 222 235788999999999 5 6899999999999999999887544443221 1268899999999334789
Q ss_pred EEEEecC---CEEEEEECCCCCCCeEEee-cccceeeEEEeCC-CCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceee
Q 038533 230 ATILMDS---NKVVILDIRSPTLPVAELE-RHRACVNAIAWAP-QSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSM 304 (337)
Q Consensus 230 ~~~~~d~---~~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~ 304 (337)
++++.++ . |++||+++...++..+. +|...|.+++|+| ++. +|++++.||.|++||++ + +.....+
T Consensus 231 ~~~~~d~~~~~-i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-~l~s~~~dg~v~~wd~~--~-----~~~~~~~ 301 (416)
T 2pm9_A 231 ATATGSDNDPS-ILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEH-LLLSSGRDNTVLLWNPE--S-----AEQLSQF 301 (416)
T ss_dssp EEEECCSSSCC-CCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSS-CEEEEESSSEEEEECSS--S-----CCEEEEE
T ss_pred EEEECCCCCce-EEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCC-eEEEEeCCCCEEEeeCC--C-----Cccceee
Confidence 9999888 7 99999998657778888 8999999999999 777 99999999999999998 3 2234467
Q ss_pred eeCCCceeEEEEccCC-CceEEEEcCCcEEEEeC
Q 038533 305 YSAGSEINQLQWSPAQ-PDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 305 ~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~l 337 (337)
..|...|.+++|+|++ ..+++++.|+.|++|++
T Consensus 302 ~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~ 335 (416)
T 2pm9_A 302 PARGNWCFKTKFAPEAPDLFACASFDNKIEVQTL 335 (416)
T ss_dssp ECSSSCCCCEEECTTCTTEEEECCSSSEEEEEES
T ss_pred cCCCCceEEEEECCCCCCEEEEEecCCcEEEEEc
Confidence 7899999999999999 67788889999999986
No 34
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-41 Score=295.36 Aligned_cols=299 Identities=14% Similarity=0.177 Sum_probs=238.3
Q ss_pred ceeeeeCCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCC---cceecCCCcCCCCCCCCeEEEecCC-CCcccC
Q 038533 14 NSVTHESPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPES---LSIKTHPSLSFDHPYPPTKLMFDPN-SSSRKS 87 (337)
Q Consensus 14 ~~~~~~~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~---~~~~~~~~~~~~~~~~i~~i~~~~~-~~~~~~ 87 (337)
++..+.+..+|.+++|+ +++||+|+. ||.|++|++.... .... . ...|...|.+++|+|+ +.
T Consensus 60 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~----dg~v~vw~~~~~~~~~~~~~---~-~~~h~~~v~~~~~~~~~~~---- 127 (416)
T 2pm9_A 60 PIASLQVDSKFNDLDWSHNNKIIAGALD----NGSLELYSTNEANNAINSMA---R-FSNHSSSVKTVKFNAKQDN---- 127 (416)
T ss_dssp CSCCCCCSSCEEEEEECSSSSCEEEEES----SSCEEEECCSSTTSCCCEEE---E-CCCSSSCCCEEEECSSSTT----
T ss_pred EEEEEecCCceEEEEECCCCCeEEEEcc----CCeEEEeecccccccccchh---h-ccCCccceEEEEEcCCCCC----
Confidence 45556788899999999 889999996 9999999998722 1222 2 2689999999999998 66
Q ss_pred cCCccEEEEeC-C-eEEEEecCCCC------c-cceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCC
Q 038533 88 SSNRHLLASSG-D-FLRLWDVGDSS------I-EPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEK 158 (337)
Q Consensus 88 ~~~~~~l~~~~-~-~v~vw~~~~~~------~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 158 (337)
+|++++ | .|++||+.+++ . .....+..|. ..|.+++|+|..+.++++++.||.|++||+++
T Consensus 128 -----~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~ 197 (416)
T 2pm9_A 128 -----VLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSV-----DEVISLAWNQSLAHVFASAGSSNFASIWDLKA 197 (416)
T ss_dssp -----BEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSS-----CCCCEEEECSSCTTEEEEESSSSCEEEEETTT
T ss_pred -----EEEEEcCCCeEEEEECCCCccccccccccccccccCCC-----CCeeEEEeCCCCCcEEEEEcCCCCEEEEECCC
Confidence 888887 5 99999999874 1 1122234555 89999999993378999999999999999999
Q ss_pred ccchhhhhcc------CCceeEEEeC-CC-cEEEEEcCCC---eEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCc
Q 038533 159 GVVETQLIAH------DKEVYDICWG-EA-RVFASVSADG---SVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLR 227 (337)
Q Consensus 159 ~~~~~~~~~~------~~~v~~~~~~-~~-~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 227 (337)
++.+..+..+ ...|.+++|+ ++ .++++++.|+ .|++||+++......... ..|...+.+++|+|.++.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~ 276 (416)
T 2pm9_A 198 KKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLN-QGHQKGILSLDWCHQDEH 276 (416)
T ss_dssp TEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCC-SCCSSCEEEEEECSSCSS
T ss_pred CCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEee-cCccCceeEEEeCCCCCC
Confidence 9887777765 7889999999 43 6899999999 999999998743333232 047789999999987889
Q ss_pred EEEEEEecCCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCC-------C
Q 038533 228 YMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGI-------D 300 (337)
Q Consensus 228 ~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-------~ 300 (337)
+|++++.|+. |++||+++ .+++..+..|...|.+++|+|+++.+|++++.||.|++|++........... .
T Consensus 277 ~l~s~~~dg~-v~~wd~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~ 354 (416)
T 2pm9_A 277 LLLSSGRDNT-VLLWNPES-AEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQES 354 (416)
T ss_dssp CEEEEESSSE-EEEECSSS-CCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------
T ss_pred eEEEEeCCCC-EEEeeCCC-CccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCC
Confidence 9999999998 99999998 6678889999999999999999944999999999999999984332211000 0
Q ss_pred cee---------------------eeeCCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 301 PMS---------------------MYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 301 ~~~---------------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
+.. ...|..++.+++|+|+|++|++++.|+.|+||++
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~ 412 (416)
T 2pm9_A 355 ETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNP 412 (416)
T ss_dssp ------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCC
T ss_pred cccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEe
Confidence 000 0115677889999999998888889999999986
No 35
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.2e-40 Score=306.70 Aligned_cols=289 Identities=15% Similarity=0.196 Sum_probs=228.0
Q ss_pred eCCCceeEEEEe---cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEE
Q 038533 19 ESPYPLYAMAVC---GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLA 95 (337)
Q Consensus 19 ~~~~~v~~~~~s---~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~ 95 (337)
.|.+.|++++|+ +++|++|+. |+.|+||++...............+|...|.+++|+|++. +|+
T Consensus 380 ~H~~~V~~v~~~~~~~~~l~s~s~----D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~---------~l~ 446 (694)
T 3dm0_A 380 AHTDMVTAIATPIDNADIIVSASR----DKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQ---------FAL 446 (694)
T ss_dssp CCSSCEEEEECCTTCCSEEEEEET----TSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSS---------EEE
T ss_pred cCCceeEEEEecCCCCCEEEEEeC----CCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCC---------EEE
Confidence 579999999998 578999997 9999999997654321110011268999999999999998 888
Q ss_pred EeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccch---hhhhccCC
Q 038533 96 SSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVE---TQLIAHDK 170 (337)
Q Consensus 96 ~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~---~~~~~~~~ 170 (337)
+|+ | +|+|||+.++ .....+.+|. ..|.+++|+| ++++|++|+.|++|++||+...... ....+|..
T Consensus 447 sgs~Dg~v~vwd~~~~--~~~~~~~~h~-----~~v~~~~~s~-~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~ 518 (694)
T 3dm0_A 447 SGSWDGELRLWDLAAG--VSTRRFVGHT-----KDVLSVAFSL-DNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRD 518 (694)
T ss_dssp EEETTSEEEEEETTTT--EEEEEEECCS-----SCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSS
T ss_pred EEeCCCcEEEEECCCC--cceeEEeCCC-----CCEEEEEEeC-CCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCC
Confidence 887 5 9999999998 6778889998 9999999999 9999999999999999998655322 22347889
Q ss_pred ceeEEEeCC-C--cEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCC
Q 038533 171 EVYDICWGE-A--RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSP 247 (337)
Q Consensus 171 ~v~~~~~~~-~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~ 247 (337)
.|.+++|++ + ..+++++.|+.|++||+++.+....+ ..|...|.+++|+| ++++|++++.|+. |++||+++
T Consensus 519 ~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~---~~h~~~v~~v~~sp-dg~~l~sg~~Dg~-i~iwd~~~- 592 (694)
T 3dm0_A 519 WVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTL---AGHTGYVSTVAVSP-DGSLCASGGKDGV-VLLWDLAE- 592 (694)
T ss_dssp CEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEE---CCCSSCEEEEEECT-TSSEEEEEETTSB-CEEEETTT-
T ss_pred cEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEE---cCCCCCEEEEEEeC-CCCEEEEEeCCCe-EEEEECCC-
Confidence 999999993 3 58999999999999999987744333 35788999999999 9999999999999 99999998
Q ss_pred CCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCC------------CceeeeeCCCceeEEE
Q 038533 248 TLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGI------------DPMSMYSAGSEINQLQ 315 (337)
Q Consensus 248 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~------------~~~~~~~~~~~v~~~~ 315 (337)
++.+..+. +...|.+++|+|++. +|++++ |+.|++||++.......... .+.....+...+++++
T Consensus 593 ~~~~~~~~-~~~~v~~~~~sp~~~-~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 669 (694)
T 3dm0_A 593 GKKLYSLE-ANSVIHALCFSPNRY-WLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLN 669 (694)
T ss_dssp TEEEECCB-CSSCEEEEEECSSSS-EEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEE
T ss_pred CceEEEec-CCCcEEEEEEcCCCc-EEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEE
Confidence 55555555 456799999999987 666665 66799999983221100000 0000111223478999
Q ss_pred EccCCCceEEEEcCCcEEEEeC
Q 038533 316 WSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 316 ~~~~~~~l~~~~~d~~i~iw~l 337 (337)
|+|++++|++++.||.|+||++
T Consensus 670 ~spdg~~l~sgs~Dg~i~iW~i 691 (694)
T 3dm0_A 670 WSADGSTLFSGYTDGVIRVWGI 691 (694)
T ss_dssp ECTTSSEEEEEETTSEEEEEEC
T ss_pred EcCCCCEEEEEcCCCeEEEEec
Confidence 9999999999999999999986
No 36
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.8e-41 Score=290.25 Aligned_cols=291 Identities=14% Similarity=0.159 Sum_probs=221.6
Q ss_pred CCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEe
Q 038533 20 SPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASS 97 (337)
Q Consensus 20 ~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~ 97 (337)
+..+|++++|+ +++||+|+. |+.|+||++......... .+ .+|...|.+++|+|++. +|+++
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~----d~~i~iw~~~~~~~~~~~--~~-~~h~~~v~~~~~s~~~~---------~l~s~ 73 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTA----TNQVELYEQDGNGWKHAR--TF-SDHDKIVTCVDWAPKSN---------RIVTC 73 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCS----SSCBCEEEEETTEEEECC--CB-CCCSSCEEEEEECTTTC---------CEEEE
T ss_pred CCCcEEEEEECCCCCEEEEecC----CCEEEEEEccCCceEEEE--EE-ecCCceEEEEEEeCCCC---------EEEEE
Confidence 46789999999 899999986 999999999865312221 23 68999999999999998 88887
Q ss_pred C-C-eEEEEecCCCC-ccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCcc---chhhhhc-cCC
Q 038533 98 G-D-FLRLWDVGDSS-IEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGV---VETQLIA-HDK 170 (337)
Q Consensus 98 ~-~-~v~vw~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~---~~~~~~~-~~~ 170 (337)
+ | .|++||+.+++ ......+..|. ..|.+++|+| ++++|++|+.|+.|++||+++++ ....+.. |..
T Consensus 74 s~d~~v~vwd~~~~~~~~~~~~~~~~~-----~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~ 147 (377)
T 3dwl_C 74 SQDRNAYVYEKRPDGTWKQTLVLLRLN-----RAATFVRWSP-NEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRS 147 (377)
T ss_dssp ETTSSEEEC------CCCCEEECCCCS-----SCEEEEECCT-TSSCCEEEESSSCEEECCC-----CCCCEEECSSCCS
T ss_pred eCCCeEEEEEcCCCCceeeeeEecccC-----CceEEEEECC-CCCEEEEEecCCeEEEEEECCcccceeeeEeecccCC
Confidence 7 5 99999999874 34667777887 9999999999 99999999999999999999887 3566666 999
Q ss_pred ceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCC---------------ceeeecCCCCCCCceEEEeecCCCcEEEEEEe
Q 038533 171 EVYDICWG-EARVFASVSADGSVRIFDLRDKEH---------------STIIYESPQPDTPLLRLAWNKQDLRYMATILM 234 (337)
Q Consensus 171 ~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~---------------~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~ 234 (337)
.|.+++|+ ++++|++++.|+.|++||++.... ....... .|...+.+++|+| ++++|++++.
T Consensus 148 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp-~~~~l~~~~~ 225 (377)
T 3dwl_C 148 TILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSP-SGNALAYAGH 225 (377)
T ss_dssp CEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECT-TSSCEEEEET
T ss_pred CeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECC-CCCEEEEEeC
Confidence 99999999 789999999999999999964321 1122222 6788999999999 9999999999
Q ss_pred cCCEEEEEECCCCCCC---eEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCC------CCCCCCCC-----
Q 038533 235 DSNKVVILDIRSPTLP---VAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPP------VAGPNGID----- 300 (337)
Q Consensus 235 d~~~i~i~d~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~------~~~~~~~~----- 300 (337)
|+. |++||+++...+ +..+..|...|.+++|+|+++ +|++++.++.+ +|+..... ...+....
T Consensus 226 d~~-i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (377)
T 3dwl_C 226 DSS-VTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESA-IVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHT 302 (377)
T ss_dssp TTE-EC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTE-EEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSS
T ss_pred CCc-EEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCC-EEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccc
Confidence 998 999999984432 677888999999999999998 89988866655 67665211 00000000
Q ss_pred ----------------------------------ceeeeeCCCceeEEEEccCCCc----eEEEEcCCcEEEEeC
Q 038533 301 ----------------------------------PMSMYSAGSEINQLQWSPAQPD----WLAIAFSNKMQLLKV 337 (337)
Q Consensus 301 ----------------------------------~~~~~~~~~~v~~~~~~~~~~~----l~~~~~d~~i~iw~l 337 (337)
......|...|+++++.+.... +++++.||.|+||+|
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 303 GNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp SSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 0011138999999998776544 899999999999996
No 37
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.9e-40 Score=282.19 Aligned_cols=311 Identities=12% Similarity=0.105 Sum_probs=222.4
Q ss_pred ceeeeeCCCceeEEEEe--cceEEEeeeec---cCcceEEEEEecCCCcceec----CC-CcCCCCCCCCeEEEecCCCC
Q 038533 14 NSVTHESPYPLYAMAVC--GQRIAVGSFIE---DYTNRVDVVSFEPESLSIKT----HP-SLSFDHPYPPTKLMFDPNSS 83 (337)
Q Consensus 14 ~~~~~~~~~~v~~~~~s--~~~la~g~~~~---~~d~~i~i~~~~~~~~~~~~----~~-~~~~~~~~~i~~i~~~~~~~ 83 (337)
....+....||+|++|+ +++||+|+.+. +-++.|++|+++........ .. .....|...|.++++.++.-
T Consensus 7 ~~~~~~~g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~ 86 (365)
T 4h5i_A 7 VTASYNVGYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKGII 86 (365)
T ss_dssp CEEEEECSSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETTEE
T ss_pred eeeecCCCCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCCEE
Confidence 44566678899999999 88888887421 12457999999866542110 00 01257888899888754311
Q ss_pred cccCcCCccEEEEeC-C-eEEEEecCCCCc--cceeeecCCCCCcccCCeeEEEeecCCCCeEEE--eeCCCcEEEEeCC
Q 038533 84 SRKSSSNRHLLASSG-D-FLRLWDVGDSSI--EPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGT--CSIDTTCTIWDIE 157 (337)
Q Consensus 84 ~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~--~~~dg~i~v~d~~ 157 (337)
......+...|++++ + .+++|++..... +................+.+++|+| +++++++ ++.|++|++||++
T Consensus 87 ~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSp-Dg~~la~as~~~d~~i~iwd~~ 165 (365)
T 4h5i_A 87 LVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISR-EGTVAAIASSKVPAIMRIIDPS 165 (365)
T ss_dssp EEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECT-TSSCEEEEESCSSCEEEEEETT
T ss_pred EEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcC-CCCEEEEEECCCCCEEEEeECC
Confidence 000000001122223 4 799999876531 2222222222222235688999999 9998764 4578999999999
Q ss_pred CccchhhhhccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecC
Q 038533 158 KGVVETQLIAHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 236 (337)
Q Consensus 158 ~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~ 236 (337)
+++.+..+. |...|.+++|+ +++++++++.+ .+.+|+..+++..... ....|...+.+++|+| ++.++++++.++
T Consensus 166 ~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~-~~~~~~~~v~~v~fsp-dg~~l~~~s~d~ 241 (365)
T 4h5i_A 166 DLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARK-TDFDKNWSLSKINFIA-DDTVLIAASLKK 241 (365)
T ss_dssp TTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEE-CCCCTTEEEEEEEEEE-TTEEEEEEEESS
T ss_pred CCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeee-ecCCCCCCEEEEEEcC-CCCEEEEEecCC
Confidence 999888775 77889999999 78889888854 5677777766643332 2234677899999999 999999999887
Q ss_pred C---EEEEEECCCCCC---CeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCcee-eeeCCC
Q 038533 237 N---KVVILDIRSPTL---PVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMS-MYSAGS 309 (337)
Q Consensus 237 ~---~i~i~d~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~~~~~ 309 (337)
. .+++||+..... ....+.+|...|++++|+|+|+ +||+|+.|+.|+|||++ + +..... ..+|..
T Consensus 242 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~-~lasgs~D~~V~iwd~~--~-----~~~~~~~~~gH~~ 313 (365)
T 4h5i_A 242 GKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGE-LAVLASNDNSIALVKLK--D-----LSMSKIFKQAHSF 313 (365)
T ss_dssp SCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSC-EEEEEETTSCEEEEETT--T-----TEEEEEETTSSSS
T ss_pred cceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCC-ceEEEcCCCEEEEEECC--C-----CcEEEEecCcccC
Confidence 3 488898876332 1345678889999999999999 99999999999999998 3 112223 357999
Q ss_pred ceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 310 EINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 310 ~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
+|++++|+||+++|++++.|++|+||+|
T Consensus 314 ~V~~v~fSpdg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 314 AITEVTISPDSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEEC
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 9999999999999999999999999986
No 38
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.5e-41 Score=282.30 Aligned_cols=253 Identities=20% Similarity=0.325 Sum_probs=205.8
Q ss_pred CCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecC-CCCeE
Q 038533 66 SFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEI-EPKRI 142 (337)
Q Consensus 66 ~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l 142 (337)
..+|.+.|++++|+|+++ +||+|+ | +|+|||+.+++...+..+.+|. .+|.+++|++. ++++|
T Consensus 9 ~~~H~~~V~~v~~s~~g~---------~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~-----~~V~~v~~~~~~~~~~l 74 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGT---------RLATCSSDRSVKIFDVRNGGQILIADLRGHE-----GPVWQVAWAHPMYGNIL 74 (316)
T ss_dssp -----CCEEEEEECGGGC---------EEEEEETTTEEEEEEEETTEEEEEEEEECCS-----SCEEEEEECCGGGSSCE
T ss_pred cccccCeEEEeeEcCCCC---------EEEEEeCCCeEEEEEecCCCcEEEEEEcCCC-----ccEEEEEeCCCCCCCEE
Confidence 368999999999999998 888887 6 9999999887544677889998 99999999752 47899
Q ss_pred EEeeCCCcEEEEeCCCcc--chhhhhccCCceeEEEeC-C--CcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCce
Q 038533 143 GTCSIDTTCTIWDIEKGV--VETQLIAHDKEVYDICWG-E--ARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLL 217 (337)
Q Consensus 143 ~~~~~dg~i~v~d~~~~~--~~~~~~~~~~~v~~~~~~-~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~ 217 (337)
++|+.|++|++||+++++ ....+.+|...|.+++|+ + +.+|++|+.|+.|++||++.............|...+.
T Consensus 75 ~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~ 154 (316)
T 3bg1_A 75 ASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCN 154 (316)
T ss_dssp EEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBC
T ss_pred EEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcc
Confidence 999999999999998874 455677899999999999 3 67999999999999999987643322233345778999
Q ss_pred EEEeecCC----------------CcEEEEEEecCCEEEEEECCCCC--CCeEEeecccceeeEEEeCCCC----CCeEE
Q 038533 218 RLAWNKQD----------------LRYMATILMDSNKVVILDIRSPT--LPVAELERHRACVNAIAWAPQS----RRHIC 275 (337)
Q Consensus 218 ~~~~~~~~----------------~~~l~~~~~d~~~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~----~~~l~ 275 (337)
+++|+|.. +.+|++++.|+. |++||++... .++..+.+|...|.+++|+|++ . +|+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~-v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~-~la 232 (316)
T 3bg1_A 155 AVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNL-IKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTS-TIA 232 (316)
T ss_dssp CCEECCCCCC------CCSCCCCCCCBEECCBTTSB-CCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCC-EEE
T ss_pred eEEEccccCCccccccccccCccccceEEEecCCCe-EEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCc-eEE
Confidence 99999831 478999999998 9999997533 3566788999999999999986 5 899
Q ss_pred EEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 276 SVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 276 ~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
+++.||+|++|+++...... .....+..|...|.+++|+|+++.|++++.|+.|+||++
T Consensus 233 s~s~D~~v~iw~~~~~~~~~---~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~ 291 (316)
T 3bg1_A 233 SCSQDGRVFIWTCDDASSNT---WSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKE 291 (316)
T ss_dssp EEETTCEEEEEECSSTTCCC---CBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEE
T ss_pred EEcCCCeEEEEEccCccccc---hhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEE
Confidence 99999999999998321111 112345678999999999999999999999999999973
No 39
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.8e-40 Score=286.87 Aligned_cols=283 Identities=18% Similarity=0.223 Sum_probs=230.0
Q ss_pred ceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C
Q 038533 23 PLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D 99 (337)
Q Consensus 23 ~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~ 99 (337)
.+....|+ +++||+|+. ||.|+||++........ ...|...|.+++|+|++. +|++++ |
T Consensus 99 ~~~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~~~~~-----~~~h~~~v~~~~~~~~~~---------~l~s~s~d 160 (420)
T 3vl1_A 99 YTAVDTAKLQMRRFILGTT----EGDIKVLDSNFNLQREI-----DQAHVSEITKLKFFPSGE---------ALISSSQD 160 (420)
T ss_dssp EEEEEEECSSSCEEEEEET----TSCEEEECTTSCEEEEE-----TTSSSSCEEEEEECTTSS---------EEEEEETT
T ss_pred ceEEEEEecCCCEEEEEEC----CCCEEEEeCCCcceeee-----cccccCccEEEEECCCCC---------EEEEEeCC
Confidence 34444566 889999997 99999998775433222 258999999999999998 888877 5
Q ss_pred -eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhc---cC------
Q 038533 100 -FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIA---HD------ 169 (337)
Q Consensus 100 -~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~---~~------ 169 (337)
.|++||+.++ +....+.+|. ..|.+++|+| ++++|++++.||.|++||+++++.+..+.. +.
T Consensus 161 ~~i~iwd~~~~--~~~~~~~~h~-----~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~ 232 (420)
T 3vl1_A 161 MQLKIWSVKDG--SNPRTLIGHR-----ATVTDIAIID-RGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSI 232 (420)
T ss_dssp SEEEEEETTTC--CCCEEEECCS-----SCEEEEEEET-TTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEE
T ss_pred CeEEEEeCCCC--cCceEEcCCC-----CcEEEEEEcC-CCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEE
Confidence 9999999988 5777888888 9999999999 999999999999999999999887776654 22
Q ss_pred ---------------CceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCc-EEEEE
Q 038533 170 ---------------KEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLR-YMATI 232 (337)
Q Consensus 170 ---------------~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~ 232 (337)
..+.+++|+ +++++++++.||.|++||+++++....... .|...+.+++|+| ++. +|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~~l~~g 309 (420)
T 3vl1_A 233 ALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPS--KFTCSCNSLTVDG-NNANYIYAG 309 (420)
T ss_dssp EEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECC--TTSSCEEEEEECS-SCTTEEEEE
T ss_pred EEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEccc--ccCCCceeEEEeC-CCCCEEEEE
Confidence 445556667 688999999999999999998875555433 3678999999999 777 99999
Q ss_pred EecCCEEEEEECCCCCCCeEEeec-ccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCC--CCCceeeeeCCC
Q 038533 233 LMDSNKVVILDIRSPTLPVAELER-HRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPN--GIDPMSMYSAGS 309 (337)
Q Consensus 233 ~~d~~~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~--~~~~~~~~~~~~ 309 (337)
+.|+. |++||+++...++..+.. |...|.++.+ |++. +|++++.||.|++|++..+...... ...+.....|..
T Consensus 310 ~~dg~-i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~-~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (420)
T 3vl1_A 310 YENGM-LAQWDLRSPECPVGEFLINEGTPINNVYF-AAGA-LFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDD 386 (420)
T ss_dssp ETTSE-EEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTE-EEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSC
T ss_pred eCCCe-EEEEEcCCCcCchhhhhccCCCCceEEEe-CCCC-EEEEecCCccEEEEeccCCCCCccceeccCccEEccCCc
Confidence 99998 999999986666777776 6677888855 4677 9999999999999999843222111 122445667899
Q ss_pred ceeEEEEccCCC---ceEEEEcCCcEEEEeC
Q 038533 310 EINQLQWSPAQP---DWLAIAFSNKMQLLKV 337 (337)
Q Consensus 310 ~v~~~~~~~~~~---~l~~~~~d~~i~iw~l 337 (337)
.|.+++|+|+++ .+++++.+|.+.+|++
T Consensus 387 ~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~ 417 (420)
T 3vl1_A 387 AVSQFCYVSDDESNGEVLEVGKNNFCALYNL 417 (420)
T ss_dssp CCCEEEEECCSSSSCEEEEEETTTEEEEEES
T ss_pred ceEEEEEccCCCCcceEEEEcCCceEEEEec
Confidence 999999999998 7999999999999985
No 40
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.9e-40 Score=283.33 Aligned_cols=287 Identities=14% Similarity=0.233 Sum_probs=235.9
Q ss_pred ceeeeeCCCceeEEEEe--cc-eEEEeeeeccCcceEEEEEe----cCCCc------ceecCCCcCC-----CCCCCCeE
Q 038533 14 NSVTHESPYPLYAMAVC--GQ-RIAVGSFIEDYTNRVDVVSF----EPESL------SIKTHPSLSF-----DHPYPPTK 75 (337)
Q Consensus 14 ~~~~~~~~~~v~~~~~s--~~-~la~g~~~~~~d~~i~i~~~----~~~~~------~~~~~~~~~~-----~~~~~i~~ 75 (337)
.+....|..+|++++|+ ++ +||+|+. ||.|++|++ ..... .......+.. .|...|.+
T Consensus 38 ~~~~~~~~~~v~~~~~s~~~~~~l~~~~~----dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 113 (425)
T 1r5m_A 38 ILKEIVKLDNIVSSTWNPLDESILAYGEK----NSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTC 113 (425)
T ss_dssp ECEEEEECSCCSEEEECSSCTTEEEEEET----BTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEE
T ss_pred heeeeeccCceEEEEECCCCCcEEEEecC----CceEEEEEEecccCCccccccccccccccccccccccccCCCCceEE
Confidence 34445567899999999 77 9999996 999999999 65441 2221111111 26789999
Q ss_pred EEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEE
Q 038533 76 LMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTI 153 (337)
Q Consensus 76 i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v 153 (337)
++|+|++. +|++++ + .|++|| .++ .....+..|. ..|.+++|+| ++++|++++.||.|++
T Consensus 114 ~~~s~~~~---------~l~~~~~dg~i~i~~-~~~--~~~~~~~~~~-----~~v~~~~~~~-~~~~l~~~~~d~~i~i 175 (425)
T 1r5m_A 114 LAWSHDGN---------SIVTGVENGELRLWN-KTG--ALLNVLNFHR-----APIVSVKWNK-DGTHIISMDVENVTIL 175 (425)
T ss_dssp EEECTTSS---------EEEEEETTSCEEEEE-TTS--CEEEEECCCC-----SCEEEEEECT-TSSEEEEEETTCCEEE
T ss_pred EEEcCCCC---------EEEEEeCCCeEEEEe-CCC--CeeeeccCCC-----ccEEEEEECC-CCCEEEEEecCCeEEE
Confidence 99999998 888877 5 999999 444 5677888888 9999999999 9999999999999999
Q ss_pred EeCCCccchhhhhccCCc---------------eeEEEeCCCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceE
Q 038533 154 WDIEKGVVETQLIAHDKE---------------VYDICWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLR 218 (337)
Q Consensus 154 ~d~~~~~~~~~~~~~~~~---------------v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~ 218 (337)
||+++++.+..+..+... +.+++|+++..+++++.+|.|++||+++.+....+. .|...+.+
T Consensus 176 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~---~~~~~i~~ 252 (425)
T 1r5m_A 176 WNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLI---GHHGPISV 252 (425)
T ss_dssp EETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEEC---CCSSCEEE
T ss_pred EECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeec---cCCCceEE
Confidence 999999888877777666 999999977789999999999999999887554432 46789999
Q ss_pred EEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCC
Q 038533 219 LAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNG 298 (337)
Q Consensus 219 ~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 298 (337)
++|+| ++.+|++++.|+. |++||+++ ..++..+..|...|.+++|+|++ ++++++.||.|++||++ + +
T Consensus 253 ~~~~~-~~~~l~~~~~d~~-i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~--~-----~ 320 (425)
T 1r5m_A 253 LEFND-TNKLLLSASDDGT-LRIWHGGN-GNSQNCFYGHSQSIVSASWVGDD--KVISCSMDGSVRLWSLK--Q-----N 320 (425)
T ss_dssp EEEET-TTTEEEEEETTSC-EEEECSSS-BSCSEEECCCSSCEEEEEEETTT--EEEEEETTSEEEEEETT--T-----T
T ss_pred EEECC-CCCEEEEEcCCCE-EEEEECCC-CccceEecCCCccEEEEEECCCC--EEEEEeCCCcEEEEECC--C-----C
Confidence 99999 8999999999999 99999998 56778888899999999999988 89999999999999998 3 2
Q ss_pred CCceeeeeCCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 299 IDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 299 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
.....+..|...|.+++|+|+++.|++++.||.|++|++
T Consensus 321 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~ 359 (425)
T 1r5m_A 321 TLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDL 359 (425)
T ss_dssp EEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred cEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEEC
Confidence 224466678999999999999999999999999999985
No 41
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=3e-39 Score=280.35 Aligned_cols=278 Identities=20% Similarity=0.255 Sum_probs=229.2
Q ss_pred CceeEEEEe-cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C
Q 038533 22 YPLYAMAVC-GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D 99 (337)
Q Consensus 22 ~~v~~~~~s-~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~ 99 (337)
..+..|+|| +++||+|. |++|+||+.......... . ..+|...|++|+|+|++. +||+|+ |
T Consensus 106 ~y~~~l~wS~~n~lAvgl-----d~tV~lWd~~tg~~~~~~--~-~~~~~~~V~sv~fspdg~---------~lasgs~D 168 (420)
T 4gga_A 106 YYLNLVDWSSGNVLAVAL-----DNSVYLWSASSGDILQLL--Q-MEQPGEYISSVAWIKEGN---------YLAVGTSS 168 (420)
T ss_dssp TTCBCEEECTTSEEEEEE-----TTEEEEEETTTCCEEEEE--E-CCSTTCCEEEEEECTTSS---------EEEEEETT
T ss_pred ccceeEEECCCCEEEEEe-----CCEEEEEECCCCCEEEEE--E-ecCCCCcEEEEEECCCCC---------EEEEEECC
Confidence 356789999 88999987 999999998765433222 1 257888999999999999 898887 5
Q ss_pred -eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCcc-chhhhhccCCceeEEEe
Q 038533 100 -FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGV-VETQLIAHDKEVYDICW 177 (337)
Q Consensus 100 -~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~-~~~~~~~~~~~v~~~~~ 177 (337)
.|+|||+.++ +.+..+.+|. ..+.+++|+ +..+++|+.|+.+++||..... .+..+.+|...+..+.|
T Consensus 169 g~v~iWd~~~~--~~~~~~~~h~-----~~v~~~s~~---~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~ 238 (420)
T 4gga_A 169 AEVQLWDVQQQ--KRLRNMTSHS-----ARVGSLSWN---SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRW 238 (420)
T ss_dssp SCEEEEETTTT--EEEEEECCCS-----SCEEEEEEE---TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEE
T ss_pred CeEEEEEcCCC--cEEEEEeCCC-----CceEEEeeC---CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeee
Confidence 9999999998 7888899998 899998885 4799999999999999987654 45677889999999999
Q ss_pred C-CCcEEEEEcCCCeEEEEECCCCCCce-eeecCCCCCCCceEEEeecCCCcEEEEEE--ecCCEEEEEECCCCCCCeEE
Q 038533 178 G-EARVFASVSADGSVRIFDLRDKEHST-IIYESPQPDTPLLRLAWNKQDLRYMATIL--MDSNKVVILDIRSPTLPVAE 253 (337)
Q Consensus 178 ~-~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~l~~~~--~d~~~i~i~d~~~~~~~~~~ 253 (337)
+ ++.++++++.|+.+++||...++... .+.....+...|.+++|+|....++++++ .|+. |++||+++ +.++..
T Consensus 239 ~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~-I~iwd~~t-~~~~~~ 316 (420)
T 4gga_A 239 APDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRH-IRIWNVCS-GACLSA 316 (420)
T ss_dssp CTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCE-EEEEETTT-TEEEEE
T ss_pred cCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCE-EEEEeCCc-ccccee
Confidence 9 79999999999999999998775322 22223357789999999997777777654 5777 99999998 556666
Q ss_pred eecccceeeEEEeCCCCCCeEEEEc--CCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEcCCc
Q 038533 254 LERHRACVNAIAWAPQSRRHICSVG--DDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNK 331 (337)
Q Consensus 254 ~~~~~~~v~~~~~~~~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 331 (337)
+..| ..+.++.|+|+++ .+++++ .|+.|+|||+. + +.....+.+|...|++++|+|+|+.|++++.|++
T Consensus 317 ~~~~-~~v~~~~~~~~~~-~lv~~sg~~d~~I~iwd~~--~-----~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~t 387 (420)
T 4gga_A 317 VDAH-SQVCSILWSPHYK-ELISGHGFAQNQLVIWKYP--T-----MAKVAELKGHTSRVLSLTMSPDGATVASAAADET 387 (420)
T ss_dssp EECS-SCEEEEEEETTTT-EEEEEECTTTCCEEEEETT--T-----CCEEEEECCCSSCEEEEEECTTSSCEEEEETTTE
T ss_pred eccc-cceeeeeecCCCC-eEEEEEecCCCEEEEEECC--C-----CcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCe
Confidence 6644 5789999999998 666543 79999999998 4 2234577889999999999999999999999999
Q ss_pred EEEEeC
Q 038533 332 MQLLKV 337 (337)
Q Consensus 332 i~iw~l 337 (337)
|+||++
T Consensus 388 vriWdv 393 (420)
T 4gga_A 388 LRLWRC 393 (420)
T ss_dssp EEEECC
T ss_pred EEEEEC
Confidence 999986
No 42
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=7.2e-40 Score=276.34 Aligned_cols=241 Identities=18% Similarity=0.307 Sum_probs=210.5
Q ss_pred CCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEe
Q 038533 20 SPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASS 97 (337)
Q Consensus 20 ~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~ 97 (337)
+...|.+++|+ +++||+|+. |+.+++|++............+ .+|...|.++.|++++. +++++
T Consensus 96 ~~~~v~~~~~s~~~~~l~s~~~----d~~v~iw~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~---------l~s~s 161 (340)
T 1got_B 96 RSSWVMTCAYAPSGNYVACGGL----DNICSIYNLKTREGNVRVSREL-AGHTGYLSCCRFLDDNQ---------IVTSS 161 (340)
T ss_dssp SSSCEEEEEECTTSSEEEEEET----TCEEEEEETTTCSBSCEEEEEE-ECCSSCEEEEEEEETTE---------EEEEE
T ss_pred CCccEEEEEECCCCCEEEEEeC----CCeEEEEECccCCCcceeEEEe-cCCCccEEEEEECCCCc---------EEEEE
Confidence 56789999999 899999997 9999999987654332221122 68999999999999886 76666
Q ss_pred CC-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCceeEEE
Q 038533 98 GD-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDIC 176 (337)
Q Consensus 98 ~~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~ 176 (337)
.| .|++||+.++ +....+.+|. ..|.+++|+| ++.++++|+.|+.|++||+++++.+..+.+|...|.+++
T Consensus 162 ~d~~i~~wd~~~~--~~~~~~~~h~-----~~v~~~~~~~-~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~ 233 (340)
T 1got_B 162 GDTTCALWDIETG--QQTTTFTGHT-----GDVMSLSLAP-DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAIC 233 (340)
T ss_dssp TTSCEEEEETTTT--EEEEEECCCS-----SCEEEEEECT-TSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEE
T ss_pred CCCcEEEEECCCC--cEEEEEcCCC-----CceEEEEECC-CCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEE
Confidence 67 9999999998 6788888988 9999999999 999999999999999999999998899999999999999
Q ss_pred eC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEee
Q 038533 177 WG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELE 255 (337)
Q Consensus 177 ~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~ 255 (337)
|+ ++++|++|+.||+|++||++..+..... ....+...+.+++|+| ++.+|++++.|+. |++||+++ ...+..+.
T Consensus 234 ~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~-~~~~~~~~v~~~~~s~-~g~~l~~g~~d~~-i~vwd~~~-~~~~~~~~ 309 (340)
T 1got_B 234 FFPNGNAFATGSDDATCRLFDLRADQELMTY-SHDNIICGITSVSFSK-SGRLLLAGYDDFN-CNVWDALK-ADRAGVLA 309 (340)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTEEEEEE-CCTTCCSCEEEEEECT-TSSEEEEEETTSE-EEEEETTT-CCEEEEEE
T ss_pred EcCCCCEEEEEcCCCcEEEEECCCCcEEEEE-ccCCcccceEEEEECC-CCCEEEEECCCCe-EEEEEccc-CcEeeEee
Confidence 99 7899999999999999999987644333 2223445799999999 9999999999998 99999988 56788899
Q ss_pred cccceeeEEEeCCCCCCeEEEEcCCCcEEEEe
Q 038533 256 RHRACVNAIAWAPQSRRHICSVGDDSQAFIWE 287 (337)
Q Consensus 256 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~ 287 (337)
+|...|.+++|+|++. +|++|+.||.|++||
T Consensus 310 ~h~~~v~~~~~s~dg~-~l~s~s~D~~i~iWd 340 (340)
T 1got_B 310 GHDNRVSCLGVTDDGM-AVATGSWDSFLKIWN 340 (340)
T ss_dssp CCSSCEEEEEECTTSS-CEEEEETTSCEEEEC
T ss_pred cCCCcEEEEEEcCCCC-EEEEEcCCccEEecC
Confidence 9999999999999999 999999999999997
No 43
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.1e-39 Score=292.53 Aligned_cols=272 Identities=19% Similarity=0.319 Sum_probs=234.7
Q ss_pred CCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEe
Q 038533 20 SPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASS 97 (337)
Q Consensus 20 ~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~ 97 (337)
+..+|.+++|+ +++|++++. |+.|++|+.+.. .... ..+|...|.+++|+|++. +|+++
T Consensus 261 ~~~~v~~v~~~~d~~~l~~~~~----d~~i~~w~~~~~--~~~~----~~~h~~~v~~~~~~~~~~---------~l~t~ 321 (577)
T 2ymu_A 261 HSSSVNGVAFRPDGQTIASASD----DKTVKLWNRNGQ--LLQT----LTGHSSSVWGVAFSPDGQ---------TIASA 321 (577)
T ss_dssp CSSCEEEEEECTTSSEEEEEET----TSCEEEEETTSC--EEEE----ECCCSSCEEEEEECTTSS---------EEEEE
T ss_pred CCCCEEEEEEcCCCCEEEEEeC----CCEEEEEeCCCc--EEEE----EecCCCCeEEEEECCCCC---------EEEEE
Confidence 57889999999 889999997 999999986432 2221 268999999999999998 88887
Q ss_pred C-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCceeEE
Q 038533 98 G-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDI 175 (337)
Q Consensus 98 ~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~ 175 (337)
+ | .|++||.... ....+.+|. ..|.+++|+| +++++++++.||.|++||. +++.+..+.+|...|.++
T Consensus 322 ~~d~~i~~w~~~~~---~~~~~~~~~-----~~v~~~~~s~-~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~ 391 (577)
T 2ymu_A 322 SDDKTVKLWNRNGQ---HLQTLTGHS-----SSVWGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGV 391 (577)
T ss_dssp ETTSCEEEEETTSC---EEEEECCCS-----SCEEEEEECT-TSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEE
T ss_pred eCCCeEEEEeCCCC---eeEEEeCCC-----CCEEEEEECC-CCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEE
Confidence 7 5 9999998765 456677787 8999999999 9999999999999999995 567778888999999999
Q ss_pred EeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEe
Q 038533 176 CWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAEL 254 (337)
Q Consensus 176 ~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~ 254 (337)
+|+ ++++|++++.|+.|++||.. ++....+ ..|...+.+++|+| ++++|++++.|+. |++||.. .+.+..+
T Consensus 392 ~~s~dg~~l~~~~~d~~v~~~~~~-~~~~~~~---~~~~~~v~~~~~s~-d~~~l~~~~~d~~-v~~w~~~--~~~~~~~ 463 (577)
T 2ymu_A 392 AFSPDGQTIASASDDKTVKLWNRN-GQLLQTL---TGHSSSVWGVAFSP-DDQTIASASDDKT-VKLWNRN--GQLLQTL 463 (577)
T ss_dssp EECTTSSCEEEEETTSEEEEECTT-CCEEEEE---ECCSSCEEEEEECT-TSSEEEEEETTSE-EEEEETT--SCEEEEE
T ss_pred EECCCCCEEEEEeCCCEEEEEeCC-CCEEEEe---cCCCCCeEEEEECC-CCCEEEEEcCCCE-EEEEECC--CCEEEEE
Confidence 999 79999999999999999964 3322222 24778999999999 9999999999998 9999974 4567888
Q ss_pred ecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEcCCcEEE
Q 038533 255 ERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQL 334 (337)
Q Consensus 255 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 334 (337)
.+|...|++++|+|+++ +|++++.|+.|++||.. +.....+.+|...|++++|+|++++|++++.|+.|+|
T Consensus 464 ~~~~~~v~~~~~spd~~-~las~~~d~~i~iw~~~--------~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~l 534 (577)
T 2ymu_A 464 TGHSSSVRGVAFSPDGQ-TIASASDDKTVKLWNRN--------GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKL 534 (577)
T ss_dssp ECCSSCEEEEEECTTSC-EEEEEETTSEEEEEETT--------SCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEE
T ss_pred cCCCCCEEEEEEcCCCC-EEEEEeCCCEEEEEcCC--------CCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEE
Confidence 99999999999999999 99999999999999975 2335577889999999999999999999999999999
Q ss_pred EeC
Q 038533 335 LKV 337 (337)
Q Consensus 335 w~l 337 (337)
|++
T Consensus 535 wd~ 537 (577)
T 2ymu_A 535 WNR 537 (577)
T ss_dssp ECT
T ss_pred EeC
Confidence 984
No 44
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=7.3e-40 Score=284.98 Aligned_cols=307 Identities=20% Similarity=0.328 Sum_probs=242.3
Q ss_pred CccceeeeeCCCceeEEEEe--c----------ceEEEeeeeccCcceEEEEEecCC-----------------------
Q 038533 11 RSENSVTHESPYPLYAMAVC--G----------QRIAVGSFIEDYTNRVDVVSFEPE----------------------- 55 (337)
Q Consensus 11 ~~~~~~~~~~~~~v~~~~~s--~----------~~la~g~~~~~~d~~i~i~~~~~~----------------------- 55 (337)
....++++....|..++.|. . .+|++|+...++.+.|.+++++..
T Consensus 35 ~y~~~~~~~l~wp~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~ 114 (430)
T 2xyi_A 35 LYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGS 114 (430)
T ss_dssp HEEEEEEEECSSCCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC-----------------------
T ss_pred HHHHHhhcCCCCCceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccccC
Confidence 34566777788999999998 1 679999875557789999876510
Q ss_pred -CcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCC--------CCccceeeecCCCCCc
Q 038533 56 -SLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGD--------SSIEPVAVLNNSKSSE 124 (337)
Q Consensus 56 -~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~--------~~~~~~~~~~~~~~~~ 124 (337)
...+.. .....|.+.|++++|+|++. .+||+++ + .|++|++.+ +.......+.+|.
T Consensus 115 ~~~~~~~--~~~~~h~~~v~~l~~~p~~~--------~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~--- 181 (430)
T 2xyi_A 115 VCGKIEI--EIKINHEGEVNRARYMPQNA--------CVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQ--- 181 (430)
T ss_dssp ---CEEE--EEEEEESSCCSEEEEETTEE--------EEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCS---
T ss_pred CCCceEE--EEEEcCCCcEEEEEECCCCC--------cEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCC---
Confidence 111111 12368999999999999843 3899888 4 999999986 2236777888888
Q ss_pred ccCCeeEEEeecCCCC-eEEEeeCCCcEEEEeCCCccc-------hhhhhccCCceeEEEeCC--CcEEEEEcCCCeEEE
Q 038533 125 FCAPLTSFDWNEIEPK-RIGTCSIDTTCTIWDIEKGVV-------ETQLIAHDKEVYDICWGE--ARVFASVSADGSVRI 194 (337)
Q Consensus 125 ~~~~i~~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~~-------~~~~~~~~~~v~~~~~~~--~~~l~~~~~dg~i~i 194 (337)
..|.+++|+| ++. +|++|+.||.|++||+.++.. ...+.+|...|.+++|++ +.+|++++.||.|++
T Consensus 182 --~~v~~l~~~~-~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i 258 (430)
T 2xyi_A 182 --KEGYGLSWNP-NLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMI 258 (430)
T ss_dssp --SCCCCEEECT-TSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred --CCeEEEEeCC-CCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEE
Confidence 8999999999 666 999999999999999987432 345568999999999993 779999999999999
Q ss_pred EECCCCCCceeeecCCCCCCCceEEEeecCCCc-EEEEEEecCCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCe
Q 038533 195 FDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLR-YMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRH 273 (337)
Q Consensus 195 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 273 (337)
||+++............|...+.+++|+| ++. ++++++.|+. |++||++....++..+..|...|.+++|+|+++.+
T Consensus 259 ~d~~~~~~~~~~~~~~~~~~~v~~i~~~p-~~~~~l~tg~~dg~-v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~ 336 (430)
T 2xyi_A 259 WDTRNNNTSKPSHTVDAHTAEVNCLSFNP-YSEFILATGSADKT-VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETI 336 (430)
T ss_dssp EETTCSCSSSCSEEEECCSSCEEEEEECS-SCTTEEEEEETTSE-EEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTE
T ss_pred EECCCCCCCcceeEeecCCCCeEEEEeCC-CCCCEEEEEeCCCe-EEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCE
Confidence 99998742222222224778999999999 555 7889999998 99999998777889999999999999999999768
Q ss_pred EEEEcCCCcEEEEeCCCCCCCCCC---------CCCceeeeeCCCceeEEEEccCCC-ceEEEEcCCcEEEEeC
Q 038533 274 ICSVGDDSQAFIWELPLPPVAGPN---------GIDPMSMYSAGSEINQLQWSPAQP-DWLAIAFSNKMQLLKV 337 (337)
Q Consensus 274 l~~~~~dg~i~iw~~~~~~~~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~l 337 (337)
|++++.||.|++||+. ...... ........+|...|.+++|+|+++ .+++++.||.|+||++
T Consensus 337 l~s~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~ 408 (430)
T 2xyi_A 337 LASSGTDRRLHVWDLS--KIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQM 408 (430)
T ss_dssp EEEEETTSCCEEEEGG--GTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred EEEEeCCCcEEEEeCC--CCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEc
Confidence 9999999999999998 322110 012234557888999999999999 6778889999999985
No 45
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.4e-40 Score=276.76 Aligned_cols=252 Identities=21% Similarity=0.362 Sum_probs=208.1
Q ss_pred CCCCC-CCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceee-ecCCCCCcccCCeeEEEeecCCCCeE
Q 038533 67 FDHPY-PPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAV-LNNSKSSEFCAPLTSFDWNEIEPKRI 142 (337)
Q Consensus 67 ~~~~~-~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~l 142 (337)
.+|.. .|.+++|+|++. +||+|+ | +|+|||+.++....... ..+|. ..|.+++|+| ++++|
T Consensus 12 ~~h~~~~v~~l~~sp~g~---------~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~-----~~v~~~~~sp-~g~~l 76 (345)
T 3fm0_A 12 PAHPDSRCWFLAWNPAGT---------LLASCGGDRRIRIWGTEGDSWICKSVLSEGHQ-----RTVRKVAWSP-CGNYL 76 (345)
T ss_dssp CCSTTSCEEEEEECTTSS---------CEEEEETTSCEEEEEEETTEEEEEEEECSSCS-----SCEEEEEECT-TSSEE
T ss_pred cCCCCCcEEEEEECCCCC---------EEEEEcCCCeEEEEEcCCCcceeeeeeccccC-----CcEEEEEECC-CCCEE
Confidence 57877 899999999999 888887 5 99999998874322222 35777 8999999999 99999
Q ss_pred EEeeCCCcEEEEeCCCcc--chhhhhccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEE
Q 038533 143 GTCSIDTTCTIWDIEKGV--VETQLIAHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRL 219 (337)
Q Consensus 143 ~~~~~dg~i~v~d~~~~~--~~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~ 219 (337)
++|+.|+.+++||+..+. .+..+.+|...|.+++|+ ++++|++|+.|+.|++||++.............|...|.++
T Consensus 77 ~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~ 156 (345)
T 3fm0_A 77 ASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHV 156 (345)
T ss_dssp EEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEE
T ss_pred EEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEE
Confidence 999999999999987764 567788999999999999 79999999999999999998876544444444678899999
Q ss_pred EeecCCCcEEEEEEecCCEEEEEECCCCC-CCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCC
Q 038533 220 AWNKQDLRYMATILMDSNKVVILDIRSPT-LPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNG 298 (337)
Q Consensus 220 ~~~~~~~~~l~~~~~d~~~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 298 (337)
+|+| ++.+|++++.|+. |++||.+... .+...+.+|...|.+++|+|+++ +|++++.|+.|++|+...+.......
T Consensus 157 ~~~p-~~~~l~s~s~d~~-i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~-~l~s~s~D~~v~iW~~~~~~~~~~~~ 233 (345)
T 3fm0_A 157 VWHP-SQELLASASYDDT-VKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQ-RLASCSDDRTVRIWRQYLPGNEQGVA 233 (345)
T ss_dssp EECS-SSSCEEEEETTSC-EEEEEEETTEEEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEEEECTTCTTCCC
T ss_pred EECC-CCCEEEEEeCCCc-EEEEEecCCCEEEEEEecCCCCceEEEEECCCCC-EEEEEeCCCeEEEeccccCCCCccce
Confidence 9999 9999999999999 9999998732 24567889999999999999999 99999999999999975322211100
Q ss_pred ---CC-----ceeee-eCCCceeEEEEccCCCceEEEEcCCcEEEEe
Q 038533 299 ---ID-----PMSMY-SAGSEINQLQWSPAQPDWLAIAFSNKMQLLK 336 (337)
Q Consensus 299 ---~~-----~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~ 336 (337)
.. ...+. .|...|.+++|+|++..|++++.|+.|++|+
T Consensus 234 ~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~ 280 (345)
T 3fm0_A 234 CSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQ 280 (345)
T ss_dssp CC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEE
T ss_pred eeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEE
Confidence 00 01122 2888999999999999999999999999997
No 46
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.7e-39 Score=277.55 Aligned_cols=276 Identities=17% Similarity=0.249 Sum_probs=226.3
Q ss_pred ceeEEEEecceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-e
Q 038533 23 PLYAMAVCGQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-F 100 (337)
Q Consensus 23 ~v~~~~~s~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~ 100 (337)
.+.+++|+++.+++++. |+.|++|++......... ...|...|.+++|+|++. +|++++ + .
T Consensus 95 ~~~~~~~s~~~l~~~~~----d~~v~lw~~~~~~~~~~~----~~~~~~~v~~v~~s~~~~---------~l~~~~~dg~ 157 (401)
T 4aez_A 95 YLNLLDWSNLNVVAVAL----ERNVYVWNADSGSVSALA----ETDESTYVASVKWSHDGS---------FLSVGLGNGL 157 (401)
T ss_dssp TCBCEEECTTSEEEEEE----TTEEEEEETTTCCEEEEE----ECCTTCCEEEEEECTTSS---------EEEEEETTSC
T ss_pred eEEEEeecCCCEEEEEC----CCeEEEeeCCCCcEeEee----ecCCCCCEEEEEECCCCC---------EEEEECCCCe
Confidence 45567888555666666 999999998765543332 345899999999999998 888876 5 9
Q ss_pred EEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCC-CccchhhhhccCCceeEEEeC-
Q 038533 101 LRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIE-KGVVETQLIAHDKEVYDICWG- 178 (337)
Q Consensus 101 v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~-~~~~~~~~~~~~~~v~~~~~~- 178 (337)
|++||+.++ +....+.+|. ..|.+++|+ ++++++|+.||.|++||++ ....+..+.+|...|.+++|+
T Consensus 158 i~iwd~~~~--~~~~~~~~~~-----~~v~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~ 227 (401)
T 4aez_A 158 VDIYDVESQ--TKLRTMAGHQ-----ARVGCLSWN---RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRS 227 (401)
T ss_dssp EEEEETTTC--CEEEEECCCS-----SCEEEEEEE---TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT
T ss_pred EEEEECcCC--eEEEEecCCC-----CceEEEEEC---CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcC
Confidence 999999988 6778888888 999999995 4799999999999999998 455677788899999999999
Q ss_pred CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEE--ecCCEEEEEECCCCCCCeEEeec
Q 038533 179 EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATIL--MDSNKVVILDIRSPTLPVAELER 256 (337)
Q Consensus 179 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~--~d~~~i~i~d~~~~~~~~~~~~~ 256 (337)
++++|++++.||.|++||+++.+....+ ..|...+.+++|+|....++++++ .|+. |++||+++ ..++..+.
T Consensus 228 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~---~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~-i~i~d~~~-~~~~~~~~- 301 (401)
T 4aez_A 228 DGLQLASGGNDNVVQIWDARSSIPKFTK---TNHNAAVKAVAWCPWQSNLLATGGGTMDKQ-IHFWNAAT-GARVNTVD- 301 (401)
T ss_dssp TSSEEEEEETTSCEEEEETTCSSEEEEE---CCCSSCCCEEEECTTSTTEEEEECCTTTCE-EEEEETTT-CCEEEEEE-
T ss_pred CCCEEEEEeCCCeEEEccCCCCCccEEe---cCCcceEEEEEECCCCCCEEEEecCCCCCE-EEEEECCC-CCEEEEEe-
Confidence 7899999999999999999987644333 246789999999994455666654 5887 99999998 56676665
Q ss_pred ccceeeEEEeCCCCCCeEEE--EcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEcCCcEEE
Q 038533 257 HRACVNAIAWAPQSRRHICS--VGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQL 334 (337)
Q Consensus 257 ~~~~v~~~~~~~~~~~~l~~--~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 334 (337)
+...|.+++|+|+++ ++++ |+.||.|++|++..+.. .....+.+|...|.+++|+|+++.|++++.||.|++
T Consensus 302 ~~~~v~~~~~s~~~~-~l~~~~g~~dg~i~v~~~~~~~~-----~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~i 375 (401)
T 4aez_A 302 AGSQVTSLIWSPHSK-EIMSTHGFPDNNLSIWSYSSSGL-----TKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKF 375 (401)
T ss_dssp CSSCEEEEEECSSSS-EEEEEECTTTCEEEEEEEETTEE-----EEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEE
T ss_pred CCCcEEEEEECCCCC-eEEEEeecCCCcEEEEecCCccc-----eeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEE
Confidence 667899999999999 8887 55899999999983211 112346689999999999999999999999999999
Q ss_pred EeC
Q 038533 335 LKV 337 (337)
Q Consensus 335 w~l 337 (337)
|++
T Consensus 376 w~~ 378 (401)
T 4aez_A 376 WRV 378 (401)
T ss_dssp EEC
T ss_pred EEC
Confidence 986
No 47
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.2e-39 Score=282.97 Aligned_cols=279 Identities=13% Similarity=0.124 Sum_probs=225.4
Q ss_pred ceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C
Q 038533 23 PLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D 99 (337)
Q Consensus 23 ~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~ 99 (337)
.+++++|+ +++|++|+. |+.|++|++......... ..| ..+....|+|++. +|++++ +
T Consensus 58 ~~~~~~~s~~g~~l~~~~~----d~~v~i~d~~~~~~~~~~-----~~~-~~~~~~~~~~~~~---------~l~~~~~d 118 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARL----DGHDFLFNTIIRDGSKML-----KRA-DYTAVDTAKLQMR---------RFILGTTE 118 (420)
T ss_dssp CCTTCEEEEEETTEEEEEE----TTEEEEEECCSEETTTTS-----CSC-CEEEEEEECSSSC---------EEEEEETT
T ss_pred cccceeeeecCCeEEEEEc----CCcEEEEEecccceeeEE-----ecC-CceEEEEEecCCC---------EEEEEECC
Confidence 35589999 999999998 999999998654332221 233 4445557899998 888877 5
Q ss_pred -eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCceeEEEeC
Q 038533 100 -FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWG 178 (337)
Q Consensus 100 -~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~ 178 (337)
.|++||+.++ +....+.+|. ..|.+++|+| ++++|++|+.|+.|++||+++++.+..+.+|...|.+++|+
T Consensus 119 g~i~iwd~~~~--~~~~~~~~h~-----~~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~ 190 (420)
T 3vl1_A 119 GDIKVLDSNFN--LQREIDQAHV-----SEITKLKFFP-SGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAII 190 (420)
T ss_dssp SCEEEECTTSC--EEEEETTSSS-----SCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEE
T ss_pred CCEEEEeCCCc--ceeeeccccc-----CccEEEEECC-CCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEc
Confidence 9999999987 6677778888 9999999999 99999999999999999999999999999999999999999
Q ss_pred -CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCC---------------------CCceEEEeecCCCcEEEEEEecC
Q 038533 179 -EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPD---------------------TPLLRLAWNKQDLRYMATILMDS 236 (337)
Q Consensus 179 -~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~---------------------~~i~~~~~~~~~~~~l~~~~~d~ 236 (337)
++++|++++.||.|++||+++++....+.....+. ..+.+++|+| ++++|++++.|+
T Consensus 191 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg 269 (420)
T 3vl1_A 191 DRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT-YGKYVIAGHVSG 269 (420)
T ss_dssp TTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC-TTEEEEEEETTS
T ss_pred CCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC-CCCEEEEEcCCC
Confidence 78999999999999999999887655554332233 4455555677 899999999999
Q ss_pred CEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeee-CCCceeEEE
Q 038533 237 NKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYS-AGSEINQLQ 315 (337)
Q Consensus 237 ~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~ 315 (337)
. |++||+++..........|...|.+++|+|+++.+|++|+.||.|++||++ +... ....+.. |...|.++.
T Consensus 270 ~-i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~--~~~~----~~~~~~~~~~~~v~~~~ 342 (420)
T 3vl1_A 270 V-ITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLR--SPEC----PVGEFLINEGTPINNVY 342 (420)
T ss_dssp C-EEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETT--CTTS----CSEEEEESTTSCEEEEE
T ss_pred e-EEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcC--CCcC----chhhhhccCCCCceEEE
Confidence 9 999999985443334456888999999999997799999999999999999 3221 1334444 677788885
Q ss_pred EccCCCceEEEEcCCcEEEEeC
Q 038533 316 WSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 316 ~~~~~~~l~~~~~d~~i~iw~l 337 (337)
| |+++.|++++.|+.|++|++
T Consensus 343 ~-~~~~~l~s~~~d~~v~iw~~ 363 (420)
T 3vl1_A 343 F-AAGALFVSSGFDTSIKLDII 363 (420)
T ss_dssp E-ETTEEEEEETTTEEEEEEEE
T ss_pred e-CCCCEEEEecCCccEEEEec
Confidence 5 56778889999999999984
No 48
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-38 Score=264.78 Aligned_cols=279 Identities=18% Similarity=0.203 Sum_probs=231.3
Q ss_pred cceeee-eCCCceeEEEEe-cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCC
Q 038533 13 ENSVTH-ESPYPLYAMAVC-GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSN 90 (337)
Q Consensus 13 ~~~~~~-~~~~~v~~~~~s-~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~ 90 (337)
+....+ .|..+|++++|. +++||+|+. ||.|++|++......... ..|...|.+++|+|++.
T Consensus 9 ~~~~~l~~h~~~v~~~~~~~~~~l~s~~~----dg~v~vw~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~------- 72 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVAVDDSKVASVSR----DGTVRLWSKDDQWLGTVV-----YTGQGFLNSVCYDSEKE------- 72 (313)
T ss_dssp EEEEEECCCSSCEEEEEEEETTEEEEEET----TSEEEEEEESSSEEEEEE-----EECSSCEEEEEEETTTT-------
T ss_pred HHHHHhhCCCCCcEEEEecCCCEEEEEEc----CCcEEEEECCCCEEEEEe-----ecCCccEEEEEECCCCC-------
Confidence 344444 468999999999 999999997 999999999655433332 67899999999999998
Q ss_pred ccEEEEeC-C-eEEEEecCCCC-ccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhc
Q 038533 91 RHLLASSG-D-FLRLWDVGDSS-IEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIA 167 (337)
Q Consensus 91 ~~~l~~~~-~-~v~vw~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~ 167 (337)
+|++++ + .|++|++.... .+....+.+|. ..|.+++|+ ++++++++.||.|++|| .++.+..+..
T Consensus 73 --~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~-----~~i~~~~~~---~~~l~~~~~d~~i~~~d--~~~~~~~~~~ 140 (313)
T 3odt_A 73 --LLLFGGKDTMINGVPLFATSGEDPLYTLIGHQ-----GNVCSLSFQ---DGVVISGSWDKTAKVWK--EGSLVYNLQA 140 (313)
T ss_dssp --EEEEEETTSCEEEEETTCCTTSCC-CEECCCS-----SCEEEEEEE---TTEEEEEETTSEEEEEE--TTEEEEEEEC
T ss_pred --EEEEecCCCeEEEEEeeecCCCCcccchhhcc-----cCEEEEEec---CCEEEEEeCCCCEEEEc--CCcEEEeccc
Confidence 888777 5 99999987653 24566778887 999999994 57999999999999999 6667777888
Q ss_pred cCCceeEEEeC--CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECC
Q 038533 168 HDKEVYDICWG--EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIR 245 (337)
Q Consensus 168 ~~~~v~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~ 245 (337)
|...+.+++|. +++.+++++.||.|++||.... ...... .+...+.+++|+| ++. +++++.++. |++||++
T Consensus 141 ~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~--~~~~~~--~~~~~i~~~~~~~-~~~-~~~~~~dg~-i~i~d~~ 213 (313)
T 3odt_A 141 HNASVWDAKVVSFSENKFLTASADKTIKLWQNDKV--IKTFSG--IHNDVVRHLAVVD-DGH-FISCSNDGL-IKLVDMH 213 (313)
T ss_dssp CSSCEEEEEEEETTTTEEEEEETTSCEEEEETTEE--EEEECS--SCSSCEEEEEEEE-TTE-EEEEETTSE-EEEEETT
T ss_pred CCCceeEEEEccCCCCEEEEEECCCCEEEEecCce--EEEEec--cCcccEEEEEEcC-CCe-EEEccCCCe-EEEEECC
Confidence 99999999998 5889999999999999993322 222221 2678999999999 777 889999998 9999999
Q ss_pred CCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEE
Q 038533 246 SPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLA 325 (337)
Q Consensus 246 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 325 (337)
+ .+++..+..|...|.+++|+|++. |++++.||.|++||++ + +.....+..|...|.+++|+|+++ +++
T Consensus 214 ~-~~~~~~~~~~~~~i~~~~~~~~~~--l~~~~~dg~v~iwd~~--~-----~~~~~~~~~~~~~i~~~~~~~~~~-~~~ 282 (313)
T 3odt_A 214 T-GDVLRTYEGHESFVYCIKLLPNGD--IVSCGEDRTVRIWSKE--N-----GSLKQVITLPAISIWSVDCMSNGD-IIV 282 (313)
T ss_dssp T-CCEEEEEECCSSCEEEEEECTTSC--EEEEETTSEEEEECTT--T-----CCEEEEEECSSSCEEEEEECTTSC-EEE
T ss_pred c-hhhhhhhhcCCceEEEEEEecCCC--EEEEecCCEEEEEECC--C-----CceeEEEeccCceEEEEEEccCCC-EEE
Confidence 8 667888999999999999999984 8899999999999998 3 122446677888999999999997 888
Q ss_pred EEcCCcEEEEeC
Q 038533 326 IAFSNKMQLLKV 337 (337)
Q Consensus 326 ~~~d~~i~iw~l 337 (337)
++.||.|++|++
T Consensus 283 ~~~dg~i~iw~~ 294 (313)
T 3odt_A 283 GSSDNLVRIFSQ 294 (313)
T ss_dssp EETTSCEEEEES
T ss_pred EeCCCcEEEEeC
Confidence 999999999985
No 49
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4.1e-40 Score=281.97 Aligned_cols=245 Identities=13% Similarity=0.197 Sum_probs=210.0
Q ss_pred CCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEE
Q 038533 67 FDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGT 144 (337)
Q Consensus 67 ~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 144 (337)
.+|.+.|++++|+|++. +|++|+ | +|+|||+.++ +....+..|. ..|.+++|+| ++++|++
T Consensus 63 ~gH~~~V~~~~~sp~~~---------~l~s~s~D~~v~iWd~~~~--~~~~~~~~h~-----~~v~~~~~s~-~g~~las 125 (380)
T 3iz6_a 63 QGHSGKVYSLDWTPEKN---------WIVSASQDGRLIVWNALTS--QKTHAIKLHC-----PWVMECAFAP-NGQSVAC 125 (380)
T ss_dssp CCCSSCEEEEEECTTSS---------CEEEEETTSEEEEEETTTT--EEEEEEECCC-----TTCCCCEECT-TSSEEEE
T ss_pred cccccEEEEEEEcCCCC---------EEEEEeCCCeEEEEECCCC--ccceEEecCC-----CCEEEEEECC-CCCEEEE
Confidence 78999999999999998 888887 5 9999999988 6778888888 8999999999 9999999
Q ss_pred eeCCCcEEEEeCCCcc-------chhhhhccCCceeEEEeCC--CcEEEEEcCCCeEEEEECCCCCCceeeec--CCCCC
Q 038533 145 CSIDTTCTIWDIEKGV-------VETQLIAHDKEVYDICWGE--ARVFASVSADGSVRIFDLRDKEHSTIIYE--SPQPD 213 (337)
Q Consensus 145 ~~~dg~i~v~d~~~~~-------~~~~~~~~~~~v~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~~~~ 213 (337)
|+.|+.+++||+.+.. ....+.+|.+.+.++.|.+ +..|++|+.|++|++||+++++....+.. ...|.
T Consensus 126 ~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~ 205 (380)
T 3iz6_a 126 GGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHT 205 (380)
T ss_dssp CCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCC
T ss_pred eeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCc
Confidence 9999999999987532 3455778999999999993 56899999999999999999876544321 23577
Q ss_pred CCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCC
Q 038533 214 TPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPV 293 (337)
Q Consensus 214 ~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~ 293 (337)
..+.++.|+|.++.+|++++.|+. |++||++....++..+.+|...|++++|+|+++ +|++|+.||.|++||++.+.
T Consensus 206 ~~v~~~~~~~~~~~~l~sgs~D~~-v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~lwd~~~~~- 282 (380)
T 3iz6_a 206 ADVLSLSINSLNANMFISGSCDTT-VRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQ-RFGTGSDDGTCRLFDMRTGH- 282 (380)
T ss_dssp SCEEEEEECSSSCCEEEEEETTSC-EEEEETTTTCCCCEEECCCSSCCCEEEECTTSS-EEEEECSSSCEEEEETTTTE-
T ss_pred cCeEEEEeecCCCCEEEEEECCCe-EEEEECCCCCcceEEECCcCCCeEEEEEecCCC-eEEEEcCCCeEEEEECCCCc-
Confidence 899999998878999999999999 999999976778889999999999999999999 99999999999999998322
Q ss_pred CCCCCCCceeeee-------CCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 294 AGPNGIDPMSMYS-------AGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 294 ~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
....+.. +...|.+++|+|+++++++++.||.|++|++
T Consensus 283 ------~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~ 327 (380)
T 3iz6_a 283 ------QLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDT 327 (380)
T ss_dssp ------EEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEET
T ss_pred ------EEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEEC
Confidence 1112221 2235899999999999999999999999984
No 50
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-39 Score=280.10 Aligned_cols=282 Identities=13% Similarity=0.162 Sum_probs=233.0
Q ss_pred CCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEe
Q 038533 20 SPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASS 97 (337)
Q Consensus 20 ~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~ 97 (337)
|...|++++|+ +++||+|+. ||.|++|+. ....... ...|...|.+++|+|++. +|+++
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~----dg~i~i~~~--~~~~~~~----~~~~~~~v~~~~~~~~~~---------~l~~~ 167 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVE----NGELRLWNK--TGALLNV----LNFHRAPIVSVKWNKDGT---------HIISM 167 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEET----TSCEEEEET--TSCEEEE----ECCCCSCEEEEEECTTSS---------EEEEE
T ss_pred CCCceEEEEEcCCCCEEEEEeC----CCeEEEEeC--CCCeeee----ccCCCccEEEEEECCCCC---------EEEEE
Confidence 46699999999 899999997 999999982 2222222 267999999999999998 77777
Q ss_pred C-C-eEEEEecCCCCccceeeecCCCCCcccCC---------------eeEEEeecCCCCeEEEeeCCCcEEEEeCCCcc
Q 038533 98 G-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAP---------------LTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGV 160 (337)
Q Consensus 98 ~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~---------------i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~ 160 (337)
+ + .|++||+.++ +....+..+. .. +.+++|+| + ..+++++.+|.|++||+++++
T Consensus 168 ~~d~~i~iwd~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~g~i~~~d~~~~~ 238 (425)
T 1r5m_A 168 DVENVTILWNVISG--TVMQHFELKE-----TGGSSINAENHSGDGSLGVDVEWVD-D-DKFVIPGPKGAIFVYQITEKT 238 (425)
T ss_dssp ETTCCEEEEETTTT--EEEEEECCC--------------------CCCBSCCEEEE-T-TEEEEECGGGCEEEEETTCSS
T ss_pred ecCCeEEEEECCCC--cEEEEeeccc-----cCccceeeccccCCcceeeEEEEcC-C-CEEEEEcCCCeEEEEEcCCCc
Confidence 6 5 9999999988 5666676665 44 89999998 5 568899999999999999999
Q ss_pred chhhhhccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEE
Q 038533 161 VETQLIAHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKV 239 (337)
Q Consensus 161 ~~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i 239 (337)
.+..+..|...|.+++|+ ++++|++++.||.|++||+++.+....+. .|...+.+++|+| ++ ++++++.|+. |
T Consensus 239 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~i~~~~~~~-~~-~l~~~~~d~~-i 312 (425)
T 1r5m_A 239 PTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFY---GHSQSIVSASWVG-DD-KVISCSMDGS-V 312 (425)
T ss_dssp CSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEEC---CCSSCEEEEEEET-TT-EEEEEETTSE-E
T ss_pred eeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEec---CCCccEEEEEECC-CC-EEEEEeCCCc-E
Confidence 888888999999999999 78899999999999999999887555442 3678999999999 77 9999999998 9
Q ss_pred EEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCC-------------CCCCceeeee
Q 038533 240 VILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGP-------------NGIDPMSMYS 306 (337)
Q Consensus 240 ~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~-------------~~~~~~~~~~ 306 (337)
++||+++ ..++..+..|...|.+++|+|+++ +|++++.||.|++||+........ .......+..
T Consensus 313 ~i~d~~~-~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (425)
T 1r5m_A 313 RLWSLKQ-NTLLALSIVDGVPIFAGRISQDGQ-KYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQS 390 (425)
T ss_dssp EEEETTT-TEEEEEEECTTCCEEEEEECTTSS-EEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECC
T ss_pred EEEECCC-CcEeEecccCCccEEEEEEcCCCC-EEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcC
Confidence 9999988 567788888999999999999999 999999999999999982220000 0001235556
Q ss_pred CCC--ceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 307 AGS--EINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 307 ~~~--~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
|.. .|.+++|+|++++|++++.||.|++|++
T Consensus 391 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 423 (425)
T 1r5m_A 391 SQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAI 423 (425)
T ss_dssp TTCCCCEEEEEECTTSSEEEEEESSSCCEEEEC
T ss_pred cccCCceEEEEccCCCceEEEEecCceEEEEee
Confidence 765 9999999999999999999999999986
No 51
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.5e-39 Score=276.24 Aligned_cols=252 Identities=19% Similarity=0.262 Sum_probs=207.9
Q ss_pred CCCCCCCeEEEecCCCCcccCcCCccEEEEeCC-eEEEEecCCCCccceeeecCCCCC-------------cccCCeeEE
Q 038533 67 FDHPYPPTKLMFDPNSSSRKSSSNRHLLASSGD-FLRLWDVGDSSIEPVAVLNNSKSS-------------EFCAPLTSF 132 (337)
Q Consensus 67 ~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~~-~v~vw~~~~~~~~~~~~~~~~~~~-------------~~~~~i~~~ 132 (337)
.+|...|.+++|+|+++ +||++++ .+++|++.++ +....+..+... .....|.++
T Consensus 61 ~~h~~~V~~v~fspdg~---------~la~g~~~~v~i~~~~~g--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v 129 (393)
T 1erj_A 61 LDHTSVVCCVKFSNDGE---------YLATGCNKTTQVYRVSDG--SLVARLSDDSAANKDPENLNTSSSPSSDLYIRSV 129 (393)
T ss_dssp EECSSCCCEEEECTTSS---------EEEEECBSCEEEEETTTC--CEEEEECC-----------------CCCCBEEEE
T ss_pred cCCCCEEEEEEECCCCC---------EEEEEcCCcEEEEEecCC--CEEEEecCccccccccccccccccCCCceeEEEE
Confidence 46999999999999999 9999987 9999999988 455555544311 111349999
Q ss_pred EeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCC
Q 038533 133 DWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQ 211 (337)
Q Consensus 133 ~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 211 (337)
+|+| ++++|++|+.|+.|++||+++++.+..+.+|...|.+++|+ ++++|++++.|++|++||+++++....+.
T Consensus 130 ~~s~-dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~---- 204 (393)
T 1erj_A 130 CFSP-DGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS---- 204 (393)
T ss_dssp EECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE----
T ss_pred EECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE----
Confidence 9999 99999999999999999999999888999999999999999 78999999999999999999887544433
Q ss_pred CCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEe-------ecccceeeEEEeCCCCCCeEEEEcCCCcEE
Q 038533 212 PDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAEL-------ERHRACVNAIAWAPQSRRHICSVGDDSQAF 284 (337)
Q Consensus 212 ~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 284 (337)
+...+.+++|+|.++.+|++++.|+. |++||+++ +..+..+ .+|...|.+++|+|+++ +|++|+.||.|+
T Consensus 205 ~~~~v~~~~~~~~~~~~l~~~s~d~~-v~iwd~~~-~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~d~~v~ 281 (393)
T 1erj_A 205 IEDGVTTVAVSPGDGKYIAAGSLDRA-VRVWDSET-GFLVERLDSENESGTGHKDSVYSVVFTRDGQ-SVVSGSLDRSVK 281 (393)
T ss_dssp CSSCEEEEEECSTTCCEEEEEETTSC-EEEEETTT-CCEEEEEC------CCCSSCEEEEEECTTSS-EEEEEETTSEEE
T ss_pred cCCCcEEEEEECCCCCEEEEEcCCCc-EEEEECCC-CcEEEeecccccCCCCCCCCEEEEEECCCCC-EEEEEeCCCEEE
Confidence 34689999999978999999999999 99999987 4445554 57889999999999999 999999999999
Q ss_pred EEeCCCCCCCCC-----CCCCceeeeeCCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 285 IWELPLPPVAGP-----NGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 285 iw~~~~~~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
+||++....... .+.....+.+|...|.+++|+|++++|++++.|+.|++|++
T Consensus 282 ~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~ 339 (393)
T 1erj_A 282 LWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDK 339 (393)
T ss_dssp EEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEET
T ss_pred EEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 999983221110 01112356689999999999999999999999999999985
No 52
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.1e-39 Score=271.80 Aligned_cols=279 Identities=15% Similarity=0.225 Sum_probs=230.5
Q ss_pred eCCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEE
Q 038533 19 ESPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLAS 96 (337)
Q Consensus 19 ~~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~ 96 (337)
.+..+|.+++|+ |++++++.. ++.+.+|........... .+|...|.+++|+|+++ +|++
T Consensus 7 ~~~~~v~~~~~s~dg~~~~~~~~----~~~~~~~~~~~~~~~~~~-----~~h~~~v~~~~~~~~~~---------~l~~ 68 (337)
T 1gxr_A 7 MGSKPAYSFHVTADGQMQPVPFP----PDALIGPGIPRHARQINT-----LNHGEVVCAVTISNPTR---------HVYT 68 (337)
T ss_dssp EEEEECCEEEECSSSCEEECCCC----TTSSSSTTCCSEEEEEEE-----ECCSSCCCEEEECSSSS---------EEEE
T ss_pred ccCCceeEEEECCCCCEEEeecC----CCcEeccccCCcccccee-----ccCCCceEEEEEecCCc---------EEEE
Confidence 346789999999 888888875 666655433322222332 58999999999999998 9999
Q ss_pred eCC-eEEEEecCCCCc-cceeeec--CCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCcc--chhhhhccCC
Q 038533 97 SGD-FLRLWDVGDSSI-EPVAVLN--NSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGV--VETQLIAHDK 170 (337)
Q Consensus 97 ~~~-~v~vw~~~~~~~-~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~--~~~~~~~~~~ 170 (337)
+++ .|++|++.+++. .....+. .|. ..|.+++|+| +++++++++.||.|++||+++++ ....+..|..
T Consensus 69 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~ 142 (337)
T 1gxr_A 69 GGKGCVKVWDISHPGNKSPVSQLDCLNRD-----NYIRSCKLLP-DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAP 142 (337)
T ss_dssp ECBSEEEEEETTSTTCCSCSEEEECSCTT-----SBEEEEEECT-TSSEEEEEESSSEEEEEECCCC--EEEEEEECSSS
T ss_pred cCCCeEEEEECCCCCceeeeecccccCCC-----CcEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCCcceeeecccCCC
Confidence 888 999999987631 2233333 565 8999999999 99999999999999999999877 5566778899
Q ss_pred ceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCC
Q 038533 171 EVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTL 249 (337)
Q Consensus 171 ~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~ 249 (337)
.+.+++|+ +++++++++.||.|++||+++++....+ ..|...+.+++|+| ++.+|++++.|+. |++||+++ .+
T Consensus 143 ~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~---~~~~~~i~~~~~~~-~~~~l~~~~~dg~-i~~~d~~~-~~ 216 (337)
T 1gxr_A 143 ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF---QGHTDGASCIDISN-DGTKLWTGGLDNT-VRSWDLRE-GR 216 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE---CCCSSCEEEEEECT-TSSEEEEEETTSE-EEEEETTT-TE
T ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeee---ecccCceEEEEECC-CCCEEEEEecCCc-EEEEECCC-Cc
Confidence 99999999 7889999999999999999987644333 24678999999999 9999999999998 99999998 44
Q ss_pred CeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEcC
Q 038533 250 PVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFS 329 (337)
Q Consensus 250 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 329 (337)
.+..+ .+...+.+++|+|+++ +|++++.|+.|++||++.+ .......|...|.+++|+|+++.+++++.|
T Consensus 217 ~~~~~-~~~~~v~~~~~s~~~~-~l~~~~~~~~i~~~~~~~~--------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 286 (337)
T 1gxr_A 217 QLQQH-DFTSQIFSLGYCPTGE-WLAVGMESSNVEVLHVNKP--------DKYQLHLHESCVLSLKFAYCGKWFVSTGKD 286 (337)
T ss_dssp EEEEE-ECSSCEEEEEECTTSS-EEEEEETTSCEEEEETTSS--------CEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eEeee-cCCCceEEEEECCCCC-EEEEEcCCCcEEEEECCCC--------CeEEEcCCccceeEEEECCCCCEEEEecCC
Confidence 45555 4778899999999999 9999999999999999822 245677899999999999999999999999
Q ss_pred CcEEEEeC
Q 038533 330 NKMQLLKV 337 (337)
Q Consensus 330 ~~i~iw~l 337 (337)
|.|++|++
T Consensus 287 g~i~~~~~ 294 (337)
T 1gxr_A 287 NLLNAWRT 294 (337)
T ss_dssp SEEEEEET
T ss_pred CcEEEEEC
Confidence 99999985
No 53
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.5e-39 Score=273.74 Aligned_cols=247 Identities=19% Similarity=0.293 Sum_probs=199.1
Q ss_pred eeeeeCCCceeEEEEe-cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccE
Q 038533 15 SVTHESPYPLYAMAVC-GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHL 93 (337)
Q Consensus 15 ~~~~~~~~~v~~~~~s-~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~ 93 (337)
.....|...|++++|+ .+.+++++. ||.|+||++.......... ....+|...|.+++|+|+++ +
T Consensus 88 ~~~~~~~~~V~~~~~s~d~~~l~~s~----dg~v~lWd~~~~~~~~~~~-~~~~~h~~~V~~v~~spdg~---------~ 153 (357)
T 4g56_B 88 TAGVQTEAGVTDVAWVSEKGILVASD----SGAVELWEILEKESLLVNK-FAKYEHDDIVKTLSVFSDGT---------Q 153 (357)
T ss_dssp SEEEECSSCEEEEEEETTTEEEEEET----TSCEEEC--------CCCC-EEECCCSSCEEEEEECSSSS---------E
T ss_pred cccCCCCCCEEEEEEcCCCCEEEEEC----CCEEEEeeccccceeEEEe-eccCCCCCCEEEEEECCCCC---------E
Confidence 3445678889999999 556666775 9999999987654332221 11258999999999999998 8
Q ss_pred EEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhh--hccC
Q 038533 94 LASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQL--IAHD 169 (337)
Q Consensus 94 l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~--~~~~ 169 (337)
|++++ | .|++||+.++ +.+..+.+|. ..|.+++|+|....++++++.||.|++||+++++....+ ..+.
T Consensus 154 l~sgs~dg~v~iwd~~~~--~~~~~~~~h~-----~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~ 226 (357)
T 4g56_B 154 AVSGGKDFSVKVWDLSQK--AVLKSYNAHS-----SEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASD 226 (357)
T ss_dssp EEEEETTSCEEEEETTTT--EEEEEECCCS-----SCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCC
T ss_pred EEEEeCCCeEEEEECCCC--cEEEEEcCCC-----CCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeecccc
Confidence 88887 5 9999999998 7888899998 999999999844468999999999999999998866554 3567
Q ss_pred CceeEEEeC-C-CcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCC
Q 038533 170 KEVYDICWG-E-ARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSP 247 (337)
Q Consensus 170 ~~v~~~~~~-~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~ 247 (337)
..+.+++|+ + +.+|++|+.|+.|++||+++++....+ ..|...|.+++|+|..+++|++++.|+. |+|||+++
T Consensus 227 ~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~---~~~~~~v~~l~~sp~~~~~lasgs~D~~-i~iwd~~~- 301 (357)
T 4g56_B 227 TIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTS---AVHSQNITGLAYSYHSSPFLASISEDCT-VAVLDADF- 301 (357)
T ss_dssp SCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEE---CCCSSCEEEEEECSSSSCCEEEEETTSC-EEEECTTS-
T ss_pred ccccchhhhhcccceEEEeecccceeEEECCCCcEeEEE---eccceeEEEEEEcCCCCCEEEEEeCCCE-EEEEECCC-
Confidence 789999999 3 678999999999999999988755443 2467899999999944578999999999 99999987
Q ss_pred CCCeEEeecccceeeEEEeCC-CCCCeEEEEcCCCcEEEEeCC
Q 038533 248 TLPVAELERHRACVNAIAWAP-QSRRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 248 ~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~iw~~~ 289 (337)
++++. ..+|...|++++|+| ++. +|++++.||+|++|++.
T Consensus 302 ~~~~~-~~~H~~~V~~vafsP~d~~-~l~s~s~Dg~v~iW~~~ 342 (357)
T 4g56_B 302 SEVFR-DLSHRDFVTGVAWSPLDHS-KFTTVGWDHKVLHHHLP 342 (357)
T ss_dssp CEEEE-ECCCSSCEEEEEECSSSTT-EEEEEETTSCEEEEECC
T ss_pred CcEeE-ECCCCCCEEEEEEeCCCCC-EEEEEcCCCeEEEEECC
Confidence 44444 457999999999999 666 99999999999999998
No 54
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3.1e-39 Score=269.61 Aligned_cols=247 Identities=15% Similarity=0.226 Sum_probs=201.0
Q ss_pred eeCCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCC--CCcccCcCCccE
Q 038533 18 HESPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPN--SSSRKSSSNRHL 93 (337)
Q Consensus 18 ~~~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~--~~~~~~~~~~~~ 93 (337)
..|.++|++++|+ +++||+|+. |+.|+||++......... .+ .+|.++|.+++|+|+ +. +
T Consensus 10 ~~H~~~V~~v~~s~~g~~lasgs~----D~~v~lwd~~~~~~~~~~--~l-~gH~~~V~~v~~~~~~~~~---------~ 73 (316)
T 3bg1_A 10 TSHEDMIHDAQMDYYGTRLATCSS----DRSVKIFDVRNGGQILIA--DL-RGHEGPVWQVAWAHPMYGN---------I 73 (316)
T ss_dssp ----CCEEEEEECGGGCEEEEEET----TTEEEEEEEETTEEEEEE--EE-ECCSSCEEEEEECCGGGSS---------C
T ss_pred ccccCeEEEeeEcCCCCEEEEEeC----CCeEEEEEecCCCcEEEE--EE-cCCCccEEEEEeCCCCCCC---------E
Confidence 3578999999999 999999997 999999999765432221 22 689999999999863 66 8
Q ss_pred EEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCC--CCeEEEeeCCCcEEEEeCCCcc---chhhhh
Q 038533 94 LASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIE--PKRIGTCSIDTTCTIWDIEKGV---VETQLI 166 (337)
Q Consensus 94 l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~dg~i~v~d~~~~~---~~~~~~ 166 (337)
|++|+ | +|++||+.+++......+.+|. ..|.+++|+| + +.+|++|+.|+.|++||++.+. ....+.
T Consensus 74 l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~-----~~V~~v~~~p-~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~ 147 (316)
T 3bg1_A 74 LASCSYDRKVIIWREENGTWEKSHEHAGHD-----SSVNSVCWAP-HDYGLILACGSSDGAISLLTYTGEGQWEVKKINN 147 (316)
T ss_dssp EEEEETTSCEEEECCSSSCCCEEEEECCCS-----SCCCEEEECC-TTTCSCEEEECSSSCEEEEEECSSSCEEECCBTT
T ss_pred EEEEECCCEEEEEECCCCcceEEEEccCCC-----CceEEEEECC-CCCCcEEEEEcCCCCEEEEecCCCCCcceeeeec
Confidence 88877 6 9999999987555667788888 8999999999 5 7899999999999999998763 245667
Q ss_pred ccCCceeEEEeCC------------------CcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCC--
Q 038533 167 AHDKEVYDICWGE------------------ARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDL-- 226 (337)
Q Consensus 167 ~~~~~v~~~~~~~------------------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-- 226 (337)
+|...+.+++|++ +++|++|+.|+.|++||++.............|...|.+++|+| ++
T Consensus 148 ~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp-~~~~ 226 (316)
T 3bg1_A 148 AHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAP-SIGL 226 (316)
T ss_dssp SSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCC-CSSC
T ss_pred cccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecC-CCCC
Confidence 8999999999984 26899999999999999976543233334446889999999999 54
Q ss_pred --cEEEEEEecCCEEEEEECCCCC---CCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCC
Q 038533 227 --RYMATILMDSNKVVILDIRSPT---LPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 227 --~~l~~~~~d~~~i~i~d~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 289 (337)
.+|++++.|+. |++||++... .....+..|...|.+++|+|+++ +|++++.||.|++|+..
T Consensus 227 ~~~~las~s~D~~-v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~-~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 227 PTSTIASCSQDGR-VFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITAN-ILAVSGGDNKVTLWKES 292 (316)
T ss_dssp SCCEEEEEETTCE-EEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTC-CEEEEESSSCEEEEEEC
T ss_pred CCceEEEEcCCCe-EEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCC-EEEEEcCCCeEEEEEEC
Confidence 78999999998 9999997621 12345567889999999999999 99999999999999987
No 55
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=9e-38 Score=260.87 Aligned_cols=277 Identities=19% Similarity=0.232 Sum_probs=222.6
Q ss_pred ceeEEEEe-cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-
Q 038533 23 PLYAMAVC-GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D- 99 (337)
Q Consensus 23 ~v~~~~~s-~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~- 99 (337)
...+|+|| +++||+|. |++|+|||.+........ . ..+|...|.+++|+|+++ +|++|+ |
T Consensus 27 y~~~l~WS~~~~lAvg~-----D~tV~iWd~~tg~~~~~~--~-~~~~~~~V~~v~~~~~~~---------~l~sgs~Dg 89 (318)
T 4ggc_A 27 YLNLVDWSSGNVLAVAL-----DNSVYLWSASSGDILQLL--Q-MEQPGEYISSVAWIKEGN---------YLAVGTSSA 89 (318)
T ss_dssp TCBCEEECTTSEEEEEE-----TTEEEEEETTTCCEEEEE--E-CCSTTCCEEEEEECTTSS---------EEEEEETTS
T ss_pred cceEEEECCCCEEEEEe-----CCEEEEEECCCCCEEEEE--E-ecCCCCeEEEEEECCCCC---------EEEEEECCC
Confidence 46789999 88898887 999999998765433222 1 257889999999999999 888887 5
Q ss_pred eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCcc-chhhhhccCCceeEEEeC
Q 038533 100 FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGV-VETQLIAHDKEVYDICWG 178 (337)
Q Consensus 100 ~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~-~~~~~~~~~~~v~~~~~~ 178 (337)
+|++|++.++ +.+..+.+|. ..+.++.+ ++..+++++.++.+++|+..... .+..+.+|...+..+.+.
T Consensus 90 ~v~iw~~~~~--~~~~~~~~h~-----~~~~~~~~---~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (318)
T 4ggc_A 90 EVQLWDVQQQ--KRLRNMTSHS-----ARVGSLSW---NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWA 159 (318)
T ss_dssp EEEEEETTTT--EEEEEEECCS-----SCEEEEEE---ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEEC
T ss_pred cEEEeecCCc--eeEEEecCcc-----ceEEEeec---CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEc
Confidence 9999999998 7788889988 77777665 45899999999999999987764 456677899999999999
Q ss_pred -CCcEEEEEcCCCeEEEEECCCCCCcee-eecCCCCCCCceEEEeecCCCcEEEE--EEecCCEEEEEECCCCCCCeEEe
Q 038533 179 -EARVFASVSADGSVRIFDLRDKEHSTI-IYESPQPDTPLLRLAWNKQDLRYMAT--ILMDSNKVVILDIRSPTLPVAEL 254 (337)
Q Consensus 179 -~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~l~~--~~~d~~~i~i~d~~~~~~~~~~~ 254 (337)
+++++++++.||.|++||+++++.... ......+...+.++.++|.....+.+ ++.++. |++||.+. .... ..
T Consensus 160 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-i~lwd~~~-~~~~-~~ 236 (318)
T 4ggc_A 160 PDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRH-IRIWNVCS-GACL-SA 236 (318)
T ss_dssp TTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCE-EEEEETTT-CCEE-EE
T ss_pred CCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCE-EEEEeccc-cccc-cc
Confidence 799999999999999999998764322 22233466889999999955555543 344555 99999987 3333 34
Q ss_pred ecccceeeEEEeCCCCCCeEEEE--cCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEcCCcE
Q 038533 255 ERHRACVNAIAWAPQSRRHICSV--GDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKM 332 (337)
Q Consensus 255 ~~~~~~v~~~~~~~~~~~~l~~~--~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 332 (337)
..+...+..+.|+|++. .++++ +.|+.|++||++ + +.....+.+|...|++++|+|++++|++++.||+|
T Consensus 237 ~~~~~~v~~~~~~~~~~-~~~~~sg~~d~~i~iwd~~--~-----~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v 308 (318)
T 4ggc_A 237 VDAHSQVCSILWSPHYK-ELISGHGFAQNQLVIWKYP--T-----MAKVAELKGHTSRVLSLTMSPDGATVASAAADETL 308 (318)
T ss_dssp EECSSCEEEEEEETTTT-EEEEEECTTTCCEEEEETT--T-----CCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEE
T ss_pred ccceeeeeeeeeccccc-ceEEEEEcCCCEEEEEECC--C-----CcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeE
Confidence 45677899999999998 55544 479999999998 4 22345777899999999999999999999999999
Q ss_pred EEEeC
Q 038533 333 QLLKV 337 (337)
Q Consensus 333 ~iw~l 337 (337)
+||++
T Consensus 309 ~iWd~ 313 (318)
T 4ggc_A 309 RLWRC 313 (318)
T ss_dssp EEECC
T ss_pred EEEEC
Confidence 99986
No 56
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.3e-38 Score=267.53 Aligned_cols=242 Identities=19% Similarity=0.374 Sum_probs=203.6
Q ss_pred CCCCCCCeEEEe-----cC-CCCcccCcCCccEEEEeC-C-eEEEEecCCCC-----ccceeeecCCCCCcccCCeeEEE
Q 038533 67 FDHPYPPTKLMF-----DP-NSSSRKSSSNRHLLASSG-D-FLRLWDVGDSS-----IEPVAVLNNSKSSEFCAPLTSFD 133 (337)
Q Consensus 67 ~~~~~~i~~i~~-----~~-~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~~ 133 (337)
.+|.+.|++++| ++ ++. +|++|+ | +|++||+...+ ..+...+.+|. ..|.+++
T Consensus 18 ~gH~~~V~~~~~~~s~~~~~d~~---------~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~-----~~V~~~~ 83 (343)
T 2xzm_R 18 EGHSDWVTSIVAGFSQKENEDSP---------VLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHN-----HFVSDLA 83 (343)
T ss_dssp ECCSSCEEEEEECCCSSTTCCCC---------EEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCS-----SCEEEEE
T ss_pred ccchhhhhheeeEEEeecCCCCC---------EEEEEcCCCEEEEEECCcCCcccccccccchhccCC-----CceEEEE
Confidence 689999999999 66 776 888888 5 99999997643 13556788888 9999999
Q ss_pred eecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCC
Q 038533 134 WNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQP 212 (337)
Q Consensus 134 ~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 212 (337)
|+| ++.++++|+.|++|++||+++++.+..+.+|...|.+++|+ ++++|++++.|+.|++||++... .........|
T Consensus 84 ~~~-~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~~~~ 161 (343)
T 2xzm_R 84 LSQ-ENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC-KFSSAEKENH 161 (343)
T ss_dssp ECS-STTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE-EEECCTTTSC
T ss_pred ECC-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc-eeeeecccCC
Confidence 999 99999999999999999999999999999999999999999 78999999999999999998432 2222333357
Q ss_pred CCCceEEEeecCCC----------cEEEEEEecCCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCc
Q 038533 213 DTPLLRLAWNKQDL----------RYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQ 282 (337)
Q Consensus 213 ~~~i~~~~~~~~~~----------~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 282 (337)
...+.+++|+| ++ .+|++++.|+. |++||.+ ......+.+|...|.+++|+|+++ +|++|+.||.
T Consensus 162 ~~~v~~~~~~~-~~~~~~~~~~~~~~l~s~~~d~~-i~iwd~~--~~~~~~~~~h~~~v~~~~~s~~g~-~l~sgs~dg~ 236 (343)
T 2xzm_R 162 SDWVSCVRYSP-IMKSANKVQPFAPYFASVGWDGR-LKVWNTN--FQIRYTFKAHESNVNHLSISPNGK-YIATGGKDKK 236 (343)
T ss_dssp SSCEEEEEECC-CCCSCSCCCSSCCEEEEEETTSE-EEEEETT--TEEEEEEECCSSCEEEEEECTTSS-EEEEEETTCE
T ss_pred Cceeeeeeecc-ccccccccCCCCCEEEEEcCCCE-EEEEcCC--CceeEEEcCccccceEEEECCCCC-EEEEEcCCCe
Confidence 78899999998 54 78999999998 9999954 455677889999999999999999 9999999999
Q ss_pred EEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 283 AFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 283 i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
|++||+. ... .+.....+...|.+++|+|+++ +++++.|+.|++|++
T Consensus 237 v~iwd~~--~~~-----~~~~~~~~~~~v~~v~~sp~~~-~la~~~d~~v~iw~~ 283 (343)
T 2xzm_R 237 LLIWDIL--NLT-----YPQREFDAGSTINQIAFNPKLQ-WVAVGTDQGVKIFNL 283 (343)
T ss_dssp EEEEESS--CCS-----SCSEEEECSSCEEEEEECSSSC-EEEEEESSCEEEEES
T ss_pred EEEEECC--CCc-----ccceeecCCCcEEEEEECCCCC-EEEEECCCCEEEEEe
Confidence 9999996 221 1333445667799999999986 566778999999985
No 57
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.5e-38 Score=263.17 Aligned_cols=246 Identities=18% Similarity=0.294 Sum_probs=202.4
Q ss_pred eCCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCC--CCcccCcCCccEE
Q 038533 19 ESPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPN--SSSRKSSSNRHLL 94 (337)
Q Consensus 19 ~~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~--~~~~~~~~~~~~l 94 (337)
.|...|++++|+ +++||+|+. |+.|+||+++........ .+ .+|.++|.+++|+|+ +. +|
T Consensus 7 ~h~~~V~~~~~s~~g~~las~s~----D~~v~iw~~~~~~~~~~~--~l-~gH~~~V~~v~~s~~~~g~---------~l 70 (297)
T 2pm7_B 7 AHNEMIHDAVMDYYGKRMATCSS----DKTIKIFEVEGETHKLID--TL-TGHEGPVWRVDWAHPKFGT---------IL 70 (297)
T ss_dssp SCSSCEEEEEECTTSSEEEEEET----TSCEEEEEBCSSCBCCCE--EE-CCCSSCEEEEEECCGGGCS---------EE
T ss_pred CCcCceEEEEECCCCCEEEEEeC----CCEEEEEecCCCCcEEEE--EE-ccccCCeEEEEecCCCcCC---------EE
Confidence 578899999999 999999997 999999999754332221 22 689999999999864 66 88
Q ss_pred EEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCC--CCeEEEeeCCCcEEEEeCCCccc--hhhhhcc
Q 038533 95 ASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIE--PKRIGTCSIDTTCTIWDIEKGVV--ETQLIAH 168 (337)
Q Consensus 95 ~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~dg~i~v~d~~~~~~--~~~~~~~ 168 (337)
++|+ | +|++||+.+++......+.+|. ..|.+++|+| + +.+|++|+.|+.|++||++++.. ...+.+|
T Consensus 71 ~s~s~D~~v~iWd~~~~~~~~~~~~~~h~-----~~v~~v~~~p-~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h 144 (297)
T 2pm7_B 71 ASCSYDGKVMIWKEENGRWSQIAVHAVHS-----ASVNSVQWAP-HEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAH 144 (297)
T ss_dssp EEEETTTEEEEEEBSSSCBCCCEEECCCS-----SCEEEEEECC-GGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECC
T ss_pred EEEcCCCEEEEEEcCCCceEEEEEeecCC-----CceeEEEeCc-CCCCcEEEEEECCCcEEEEEecCCCceeeeeeecc
Confidence 8887 6 9999999987655667778887 8999999998 5 78999999999999999987642 3456789
Q ss_pred CCceeEEEeCC--------------CcEEEEEcCCCeEEEEECCCCCCce-eeecCCCCCCCceEEEeecCC---CcEEE
Q 038533 169 DKEVYDICWGE--------------ARVFASVSADGSVRIFDLRDKEHST-IIYESPQPDTPLLRLAWNKQD---LRYMA 230 (337)
Q Consensus 169 ~~~v~~~~~~~--------------~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~---~~~l~ 230 (337)
...|.+++|+| +++|++|+.|++|++||+++.+... .......|...|.+++|+| + +.+|+
T Consensus 145 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp-~~~~~~~la 223 (297)
T 2pm7_B 145 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP-TVLLRSYMA 223 (297)
T ss_dssp SSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC-CCSSSEEEE
T ss_pred cCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECC-CCCCceEEE
Confidence 99999999994 3689999999999999998765322 2223345889999999999 6 58999
Q ss_pred EEEecCCEEEEEECCCCCCC--eEEe--ecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCC
Q 038533 231 TILMDSNKVVILDIRSPTLP--VAEL--ERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 231 ~~~~d~~~i~i~d~~~~~~~--~~~~--~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 289 (337)
+++.|+. |++||++....+ ...+ ..|...|.+++|+|+++ +|++++.||.|++|+..
T Consensus 224 s~s~D~~-v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 224 SVSQDRT-CIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN-VLALSGGDNKVTLWKEN 284 (297)
T ss_dssp EEETTSC-EEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSC-CEEEEETTSCEEEEEEC
T ss_pred EEECCCc-EEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCC-EEEEEcCCCcEEEEEEC
Confidence 9999999 999999874321 1223 46778999999999999 99999999999999987
No 58
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=278.74 Aligned_cols=290 Identities=16% Similarity=0.248 Sum_probs=215.9
Q ss_pred eeCCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCc-------ceecCCCcCCCCC------------CCCeEE
Q 038533 18 HESPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESL-------SIKTHPSLSFDHP------------YPPTKL 76 (337)
Q Consensus 18 ~~~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~-------~~~~~~~~~~~~~------------~~i~~i 76 (337)
..+.++|++++|+ +++||+|+. ||.|+||++..... .+.....+ .+|. ..|.++
T Consensus 25 ~~~~~~V~~v~~s~~g~~la~g~~----dg~v~iw~~~~~~~~~~~~~~~~~~~~~~-~~h~~~~~~~~~~~~~~~V~~l 99 (447)
T 3dw8_B 25 VAEADIISTVEFNHSGELLATGDK----GGRVVIFQQEQENKIQSHSRGEYNVYSTF-QSHEPEFDYLKSLEIEEKINKI 99 (447)
T ss_dssp CCGGGSEEEEEECSSSSEEEEEET----TSEEEEEEECC-----CCCCCCEEEEEEE-ECCCCEEEGGGTEEECCCCCEE
T ss_pred ccccCcEEEEEECCCCCEEEEEcC----CCeEEEEEecCCCCCCcccccceeEeccc-ccccccccccccccccCceEEE
Confidence 3456899999999 899999997 99999999986542 11111122 5787 889999
Q ss_pred EecCCC--CcccCcCCccEEEEeC-C-eEEEEecCCCCcc-------------------------------------cee
Q 038533 77 MFDPNS--SSRKSSSNRHLLASSG-D-FLRLWDVGDSSIE-------------------------------------PVA 115 (337)
Q Consensus 77 ~~~~~~--~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~-------------------------------------~~~ 115 (337)
+|+|++ . +|++++ | .|++||+.+++.. +..
T Consensus 100 ~~~~~~~~~---------~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (447)
T 3dw8_B 100 RWLPQKNAA---------QFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRR 170 (447)
T ss_dssp EECCCCSSS---------EEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEE
T ss_pred EEcCCCCcc---------eEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceE
Confidence 999997 5 566655 6 9999999764210 011
Q ss_pred e-ecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCC-ccchh-------hhhccCCceeEEEeC-CC-cEEE
Q 038533 116 V-LNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEK-GVVET-------QLIAHDKEVYDICWG-EA-RVFA 184 (337)
Q Consensus 116 ~-~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~-~~~~~-------~~~~~~~~v~~~~~~-~~-~~l~ 184 (337)
. ..+|. ..|.+++|+| ++++|++| .|+.|++||+++ ++.+. .+.+|...|.+++|+ ++ ++|+
T Consensus 171 ~~~~~h~-----~~v~~~~~~~-~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~ 243 (447)
T 3dw8_B 171 IFANAHT-----YHINSISINS-DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFV 243 (447)
T ss_dssp EECSCCS-----SCCCEEEECT-TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEE
T ss_pred EeccCCC-----cceEEEEEcC-CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEE
Confidence 2 34666 8999999999 99999998 799999999984 33333 467899999999999 55 8999
Q ss_pred EEcCCCeEEEEECCCCCC----ceeeecCCCCCC------------CceEEEeecCCCcEEEEEEecCCEEEEEECCCCC
Q 038533 185 SVSADGSVRIFDLRDKEH----STIIYESPQPDT------------PLLRLAWNKQDLRYMATILMDSNKVVILDIRSPT 248 (337)
Q Consensus 185 ~~~~dg~i~iwd~~~~~~----~~~~~~~~~~~~------------~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~ 248 (337)
+|+.||.|++||+++++. ...+ . .+.. .+.+++|+| ++.+|++++. +. |++||+++..
T Consensus 244 s~~~dg~i~iwd~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~-~~-v~iwd~~~~~ 317 (447)
T 3dw8_B 244 YSSSKGTIRLCDMRASALCDRHSKLF-E--EPEDPSNRSFFSEIISSISDVKFSH-SGRYMMTRDY-LS-VKVWDLNMEN 317 (447)
T ss_dssp EEETTSCEEEEETTTCSSSCTTCEEE-C--CC-----CCHHHHHTTCEEEEEECT-TSSEEEEEES-SE-EEEEETTCCS
T ss_pred EEeCCCeEEEEECcCCccccceeeEe-c--cCCCccccccccccCceEEEEEECC-CCCEEEEeeC-Ce-EEEEeCCCCc
Confidence 999999999999998874 2222 2 2333 899999999 9999999888 76 9999999766
Q ss_pred CCeEEeecccce---------------eeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCC------CCC----C----
Q 038533 249 LPVAELERHRAC---------------VNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAG------PNG----I---- 299 (337)
Q Consensus 249 ~~~~~~~~~~~~---------------v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~------~~~----~---- 299 (337)
.++..+..|... +..++|+|+++ +|++|+.||.|++||+..++... +.. .
T Consensus 318 ~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~-~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (447)
T 3dw8_B 318 RPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDS-VVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRK 396 (447)
T ss_dssp SCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSS-EEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCC
T ss_pred cccceeeccccccccccccccccccccceEEEECCCCC-EEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCcc
Confidence 778888887642 23499999999 99999999999999998432100 000 0
Q ss_pred ---------C--ceeeeeCCCceeEEEEccCCCceEEEEcCCcEEEEe
Q 038533 300 ---------D--PMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLK 336 (337)
Q Consensus 300 ---------~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~ 336 (337)
. ......+...|..++|+|+++.|++++.+ .+.+|.
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~-~~~~~~ 443 (447)
T 3dw8_B 397 VCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTN-NLYIFQ 443 (447)
T ss_dssp EECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSS-CEEEEE
T ss_pred ccccCCcccccccccccccCCceeEEEECCCCCEEEEEecc-eeeeec
Confidence 0 00011345679999999999866666555 577774
No 59
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.5e-38 Score=265.87 Aligned_cols=241 Identities=18% Similarity=0.255 Sum_probs=203.1
Q ss_pred CCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCc---cceeeecCCCCCcccCCeeEEEeecCCCCe
Q 038533 67 FDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSI---EPVAVLNNSKSSEFCAPLTSFDWNEIEPKR 141 (337)
Q Consensus 67 ~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 141 (337)
.+|.+.|.+++|+|++. .+|++|+ | +|++|++..... .++..+.+|. ..|.+++|+| ++++
T Consensus 14 ~gH~~~V~~l~~~~~~~--------~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~-----~~v~~~~~s~-dg~~ 79 (319)
T 3frx_A 14 EGHNGWVTSLATSAGQP--------NLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHS-----HIVQDCTLTA-DGAY 79 (319)
T ss_dssp CCCSSCEEEEEECSSCT--------TEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCS-----SCEEEEEECT-TSSE
T ss_pred ccccceEEEEEccCCCc--------cEEEEecCCccEEEecCCCCCccccccceEEeCCc-----ccEEEEEECC-CCCE
Confidence 68999999999999764 3888887 5 999999975421 3567788998 9999999999 9999
Q ss_pred EEEeeCCCcEEEEeCCCccchhhhhccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEE
Q 038533 142 IGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLA 220 (337)
Q Consensus 142 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~ 220 (337)
|++|+.|++|++||+++++.+..+.+|...|.+++|+ ++.++++|+.|++|++||++... .. ....|...+.++.
T Consensus 80 l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~-~~---~~~~h~~~v~~~~ 155 (319)
T 3frx_A 80 ALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQC-LA---TLLGHNDWVSQVR 155 (319)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCE-EE---EECCCSSCEEEEE
T ss_pred EEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe-EE---EEeccCCcEEEEE
Confidence 9999999999999999999999999999999999999 78999999999999999997542 22 2235778999999
Q ss_pred eecC-----CCcEEEEEEecCCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCC
Q 038533 221 WNKQ-----DLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAG 295 (337)
Q Consensus 221 ~~~~-----~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~ 295 (337)
|.|. ++..+++++.|+. |++||+++ .+....+.+|...|.+++|+|+++ +|++++.||.|++||+. +
T Consensus 156 ~~~~~~~~~~~~~l~s~~~d~~-i~~wd~~~-~~~~~~~~~h~~~v~~~~~sp~g~-~l~s~~~dg~i~iwd~~--~--- 227 (319)
T 3frx_A 156 VVPNEKADDDSVTIISAGNDKM-VKAWNLNQ-FQIEADFIGHNSNINTLTASPDGT-LIASAGKDGEIMLWNLA--A--- 227 (319)
T ss_dssp ECCC------CCEEEEEETTSC-EEEEETTT-TEEEEEECCCCSCEEEEEECTTSS-EEEEEETTCEEEEEETT--T---
T ss_pred EccCCCCCCCccEEEEEeCCCE-EEEEECCc-chhheeecCCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECC--C---
Confidence 9983 2448999999999 99999987 556778889999999999999999 99999999999999998 3
Q ss_pred CCCCCceeeeeCCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 296 PNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 296 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
........+...|.+++|+|++..++++ .++.+++|++
T Consensus 228 ---~~~~~~~~~~~~v~~~~~sp~~~~la~~-~~~~i~v~~~ 265 (319)
T 3frx_A 228 ---KKAMYTLSAQDEVFSLAFSPNRYWLAAA-TATGIKVFSL 265 (319)
T ss_dssp ---TEEEEEEECCSCEEEEEECSSSSEEEEE-ETTEEEEEEE
T ss_pred ---CcEEEEecCCCcEEEEEEcCCCCEEEEE-cCCCcEEEEe
Confidence 1133344456789999999999755554 4566899863
No 60
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=8.7e-38 Score=264.90 Aligned_cols=241 Identities=14% Similarity=0.163 Sum_probs=205.6
Q ss_pred CCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEE
Q 038533 67 FDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGT 144 (337)
Q Consensus 67 ~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 144 (337)
.+|.+.|++++|+|++. +|++|+ | +|++||..++ .....+..|. ..|.+++|+| ++..+++
T Consensus 61 ~gH~~~V~~~~~s~d~~---------~l~s~s~Dg~v~vWd~~~~--~~~~~~~~~~-----~~v~~~~~sp-~g~~las 123 (354)
T 2pbi_B 61 KGHGNKVLCMDWCKDKR---------RIVSSSQDGKVIVWDSFTT--NKEHAVTMPC-----TWVMACAYAP-SGCAIAC 123 (354)
T ss_dssp ECCSSCEEEEEECTTSS---------EEEEEETTSEEEEEETTTC--CEEEEEECSS-----SCCCEEEECT-TSSEEEE
T ss_pred cCCCCeEEEEEECCCCC---------EEEEEeCCCeEEEEECCCC--CcceEEecCC-----CCEEEEEECC-CCCEEEE
Confidence 68999999999999998 888888 5 9999999888 5566677776 8899999999 9999999
Q ss_pred eeCCCcEEEEeCCCc------cchhhhhccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCce
Q 038533 145 CSIDTTCTIWDIEKG------VVETQLIAHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLL 217 (337)
Q Consensus 145 ~~~dg~i~v~d~~~~------~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~ 217 (337)
|+.|+.+++|++... .....+..|...|.+++|+ ++..|++++.|++|++||+++++....+. .|...+.
T Consensus 124 g~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~---~h~~~v~ 200 (354)
T 2pbi_B 124 GGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFH---GHGADVL 200 (354)
T ss_dssp ESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE---CCSSCEE
T ss_pred eeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEc---CCCCCeE
Confidence 999999999998654 2334556899999999999 78899999999999999999987544433 4678999
Q ss_pred EEEeecC-CCcEEEEEEecCCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCC
Q 038533 218 RLAWNKQ-DLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGP 296 (337)
Q Consensus 218 ~~~~~~~-~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~ 296 (337)
+++|+|. ++++|++++.|+. |++||+++ ++++..+..|...|++++|+|++. +|++|+.|+.|++||++...
T Consensus 201 ~~~~~~~~~g~~l~sgs~Dg~-v~~wd~~~-~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~v~lwd~~~~~---- 273 (354)
T 2pbi_B 201 CLDLAPSETGNTFVSGGCDKK-AMVWDMRS-GQCVQAFETHESDVNSVRYYPSGD-AFASGSDDATCRLYDLRADR---- 273 (354)
T ss_dssp EEEECCCSSCCEEEEEETTSC-EEEEETTT-CCEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTE----
T ss_pred EEEEEeCCCCCEEEEEeCCCe-EEEEECCC-CcEEEEecCCCCCeEEEEEeCCCC-EEEEEeCCCeEEEEECCCCc----
Confidence 9999874 4689999999999 99999998 667888999999999999999998 99999999999999998221
Q ss_pred CCCCceeee--eCCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 297 NGIDPMSMY--SAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 297 ~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
....+. .+...+.+++|+|+++.|++++.|+.|++|++
T Consensus 274 ---~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~ 313 (354)
T 2pbi_B 274 ---EVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDV 313 (354)
T ss_dssp ---EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred ---EEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEEC
Confidence 111222 22347899999999999999999999999985
No 61
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.7e-40 Score=284.98 Aligned_cols=302 Identities=15% Similarity=0.092 Sum_probs=223.4
Q ss_pred cceeee-e-CCCceeEEEEe---cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccC
Q 038533 13 ENSVTH-E-SPYPLYAMAVC---GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKS 87 (337)
Q Consensus 13 ~~~~~~-~-~~~~v~~~~~s---~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~ 87 (337)
+.+..+ . |.++|++++|+ +++||+|+. ||.|+||++................|...|.+++|+|++.
T Consensus 53 ~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~----dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~---- 124 (437)
T 3gre_A 53 KLIATLMENEPNSITSSAVSPGETPYLITGSD----QGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFD---- 124 (437)
T ss_dssp CEEEEECTTTTSCEEEEEEECSSSCEEEEEET----TSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSS----
T ss_pred eEEeeeccCCCCceEEEEECCCCCCEEEEecC----CceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCC----
Confidence 445555 3 47999999999 679999997 9999999987521111111122247999999999999998
Q ss_pred cCCccEEEEeC-C-eEEEEecC---CCCccceeeecCCC-------CCcccCCeeEEE--eecCCCCeEEEeeCCCcEEE
Q 038533 88 SSNRHLLASSG-D-FLRLWDVG---DSSIEPVAVLNNSK-------SSEFCAPLTSFD--WNEIEPKRIGTCSIDTTCTI 153 (337)
Q Consensus 88 ~~~~~~l~~~~-~-~v~vw~~~---~~~~~~~~~~~~~~-------~~~~~~~i~~~~--~~~~~~~~l~~~~~dg~i~v 153 (337)
+|++++ | .|++||+. +++ ....+..|. .......+.++. +++ ++.++++|+.||.|++
T Consensus 125 -----~l~s~s~dg~i~vwd~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~i 196 (437)
T 3gre_A 125 -----AFAVSSKDGQIIVLKVNHYQQES--EVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE-EKSLLVALTNLSRVII 196 (437)
T ss_dssp -----EEEEEETTSEEEEEEEEEEEETT--EEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS-SCEEEEEEETTSEEEE
T ss_pred -----EEEEEeCCCEEEEEEeccccCCc--eeeccccceeEEEEccCcccccCceEEEEEEcC-CCCEEEEEeCCCeEEE
Confidence 888877 5 99999995 442 222222110 000115677777 556 7899999999999999
Q ss_pred EeCCCccchhhhhc--cCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecC---CCc
Q 038533 154 WDIEKGVVETQLIA--HDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQ---DLR 227 (337)
Q Consensus 154 ~d~~~~~~~~~~~~--~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~ 227 (337)
||+++++.+..+.. |...|++++|+ ++++|++|+.||.|++||+++++....+.. .+...|.+++|+|. ++.
T Consensus 197 wd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~~v~~~~~~~~~s~~~~ 274 (437)
T 3gre_A 197 FDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSF--GDHAPITHVEVCQFYGKNSV 274 (437)
T ss_dssp EETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBC--TTCEEEEEEEECTTTCTTEE
T ss_pred EeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEec--CCCCceEEEEeccccCCCcc
Confidence 99999998888887 88999999999 789999999999999999998765444322 25568999977651 677
Q ss_pred EEEEEEecCCEEEEEECCCCCCCeEEeec--------------------------ccceeeEEEeCCCCCCeEEEEcCCC
Q 038533 228 YMATILMDSNKVVILDIRSPTLPVAELER--------------------------HRACVNAIAWAPQSRRHICSVGDDS 281 (337)
Q Consensus 228 ~l~~~~~d~~~i~i~d~~~~~~~~~~~~~--------------------------~~~~v~~~~~~~~~~~~l~~~~~dg 281 (337)
+|++++.|+. |++||+++ .+.+..+.+ |...|++++|+ +++ +|++|+.||
T Consensus 275 ~l~s~~~dg~-i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~-~l~s~~~d~ 350 (437)
T 3gre_A 275 IVVGGSSKTF-LTIWNFVK-GHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK-ILLTDEATS 350 (437)
T ss_dssp EEEEESTTEE-EEEEETTT-TEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE-EEEEEGGGT
T ss_pred EEEEEcCCCc-EEEEEcCC-CcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cce-EEEecCCCC
Confidence 9999999998 99999987 444444443 55668888998 666 999999999
Q ss_pred cEEEEeCCCCCCCCCCC------------------------------CCceeeeeCCCceeEEEEccC--CCceEEEEcC
Q 038533 282 QAFIWELPLPPVAGPNG------------------------------IDPMSMYSAGSEINQLQWSPA--QPDWLAIAFS 329 (337)
Q Consensus 282 ~i~iw~~~~~~~~~~~~------------------------------~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d 329 (337)
.|++||+..++...... ........|...|++++|+++ ++.|++++.|
T Consensus 351 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~d 430 (437)
T 3gre_A 351 SIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNS 430 (437)
T ss_dssp EEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETT
T ss_pred eEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCC
Confidence 99999998433111000 000011128999999999998 7788899999
Q ss_pred CcEEEEe
Q 038533 330 NKMQLLK 336 (337)
Q Consensus 330 ~~i~iw~ 336 (337)
|.|+||+
T Consensus 431 G~I~iw~ 437 (437)
T 3gre_A 431 GLIGIFQ 437 (437)
T ss_dssp SCEEEEC
T ss_pred ceEEEeC
Confidence 9999996
No 62
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.7e-37 Score=270.72 Aligned_cols=275 Identities=15% Similarity=0.192 Sum_probs=227.0
Q ss_pred eCCCc-eeEEEEecceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEe
Q 038533 19 ESPYP-LYAMAVCGQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASS 97 (337)
Q Consensus 19 ~~~~~-v~~~~~s~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~ 97 (337)
.|... +.++++++++|++|+. ||.|++|++......... .+|.+.|.+++|+|++. +++++
T Consensus 119 ~h~~~v~~~~~~~~~~l~sgs~----dg~i~vwd~~~~~~~~~~-----~~h~~~V~~l~~~~~~~---------l~s~s 180 (464)
T 3v7d_B 119 GHMTSVITCLQFEDNYVITGAD----DKMIRVYDSINKKFLLQL-----SGHDGGVWALKYAHGGI---------LVSGS 180 (464)
T ss_dssp CCSSSCEEEEEEETTEEEEEET----TSCEEEEETTTTEEEEEE-----CCCSSCEEEEEECSTTE---------EEEEE
T ss_pred CCCCCcEEEEEECCCEEEEEcC----CCcEEEEECCCCcEEEEE-----eCCCcCEEEEEEcCCCE---------EEEEe
Confidence 34444 6788888889999997 999999998765543333 68999999999998774 55445
Q ss_pred CC-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeec-CCCCeEEEeeCCCcEEEEeCCCccc--------------
Q 038533 98 GD-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNE-IEPKRIGTCSIDTTCTIWDIEKGVV-------------- 161 (337)
Q Consensus 98 ~~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~l~~~~~dg~i~v~d~~~~~~-------------- 161 (337)
.| +|++||+.++ +....+.+|. ..|.+++|++ .+++++++|+.||.|++||+++++.
T Consensus 181 ~dg~i~vwd~~~~--~~~~~~~~h~-----~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~ 253 (464)
T 3v7d_B 181 TDRTVRVWDIKKG--CCTHVFEGHN-----STVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVF 253 (464)
T ss_dssp TTSCEEEEETTTT--EEEEEECCCS-----SCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEE
T ss_pred CCCCEEEEECCCC--cEEEEECCCC-----CccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEe
Confidence 57 9999999998 6788888888 9999999985 2678999999999999999987653
Q ss_pred ---------hhhhhccCCceeEEEeCCCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEE
Q 038533 162 ---------ETQLIAHDKEVYDICWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 232 (337)
Q Consensus 162 ---------~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 232 (337)
+..+.+|...+.++.. +++++++++.||.|++||+++.+....+ ..|...+.+++|+| ++.+++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~---~~~~~~v~~~~~~~-~~~~l~sg 328 (464)
T 3v7d_B 254 HTPEENPYFVGVLRGHMASVRTVSG-HGNIVVSGSYDNTLIVWDVAQMKCLYIL---SGHTDRIYSTIYDH-ERKRCISA 328 (464)
T ss_dssp SCGGGCTTEEEEECCCSSCEEEEEE-ETTEEEEEETTSCEEEEETTTTEEEEEE---CCCSSCEEEEEEET-TTTEEEEE
T ss_pred eccCCCeEEEEEccCccceEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEe---cCCCCCEEEEEEcC-CCCEEEEE
Confidence 2345577788877744 5789999999999999999987744433 34778999999999 99999999
Q ss_pred EecCCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCcee
Q 038533 233 LMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEIN 312 (337)
Q Consensus 233 ~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 312 (337)
+.|+. |++||+++ ++++..+.+|...|.+++|++ . +|++++.||.|++||+. +.. ......+...+.
T Consensus 329 ~~dg~-i~vwd~~~-~~~~~~~~~h~~~v~~~~~~~--~-~l~s~s~dg~v~vwd~~--~~~------~~~~~~~~~~~~ 395 (464)
T 3v7d_B 329 SMDTT-IRIWDLEN-GELMYTLQGHTALVGLLRLSD--K-FLVSAAADGSIRGWDAN--DYS------RKFSYHHTNLSA 395 (464)
T ss_dssp ETTSC-EEEEETTT-TEEEEEECCCSSCEEEEEECS--S-EEEEEETTSEEEEEETT--TCC------EEEEEECTTCCC
T ss_pred eCCCc-EEEEECCC-CcEEEEEeCCCCcEEEEEEcC--C-EEEEEeCCCcEEEEECC--CCc------eeeeecCCCCcc
Confidence 99999 99999998 667889999999999999984 4 99999999999999999 311 333445777889
Q ss_pred EEEEccCCCceEEEEcCCcEEEEeC
Q 038533 313 QLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 313 ~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
.++|+|++..+++++ ||.|++|++
T Consensus 396 ~~~~~~~~~~l~~~~-dg~i~iwd~ 419 (464)
T 3v7d_B 396 ITTFYVSDNILVSGS-ENQFNIYNL 419 (464)
T ss_dssp EEEEEECSSEEEEEE-TTEEEEEET
T ss_pred EEEEEeCCCEEEEec-CCeEEEEEC
Confidence 999999998777666 999999985
No 63
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-38 Score=269.54 Aligned_cols=251 Identities=21% Similarity=0.317 Sum_probs=210.9
Q ss_pred CCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCC--CCeE
Q 038533 67 FDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIE--PKRI 142 (337)
Q Consensus 67 ~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l 142 (337)
.+|...|.+++|+|++. +|++++ | .|++|++.....+....+.+|. .+|++++|++ + +++|
T Consensus 8 ~~h~~~v~~~~~s~~~~---------~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~-----~~v~~~~~~~-~~~~~~l 72 (379)
T 3jrp_A 8 NAHNELIHDAVLDYYGK---------RLATCSSDKTIKIFEVEGETHKLIDTLTGHE-----GPVWRVDWAH-PKFGTIL 72 (379)
T ss_dssp EECCCCEEEEEECSSSS---------EEEEEETTSCEEEEEEETTEEEEEEEECCCS-----SCEEEEEECC-GGGCSEE
T ss_pred cCCcccEEEEEEcCCCC---------EEEEEECCCcEEEEecCCCcceeeeEecCCC-----CcEEEEEeCC-CCCCCEE
Confidence 68999999999999998 888886 5 9999999865557778888988 9999999987 5 8999
Q ss_pred EEeeCCCcEEEEeCCCcc--chhhhhccCCceeEEEeC-C--CcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCce
Q 038533 143 GTCSIDTTCTIWDIEKGV--VETQLIAHDKEVYDICWG-E--ARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLL 217 (337)
Q Consensus 143 ~~~~~dg~i~v~d~~~~~--~~~~~~~~~~~v~~~~~~-~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~ 217 (337)
++|+.||.|++||+++++ .+..+..|...|.+++|+ + +.+|++++.|+.|++||++.......... ..|...+.
T Consensus 73 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-~~~~~~v~ 151 (379)
T 3jrp_A 73 ASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIII-DAHAIGVN 151 (379)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEE-ECCTTCEE
T ss_pred EEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEe-cCCCCceE
Confidence 999999999999999886 667777899999999999 5 78999999999999999998754333222 24678999
Q ss_pred EEEeecC------------CCcEEEEEEecCCEEEEEECCCCCC---CeEEeecccceeeEEEeCCC---CCCeEEEEcC
Q 038533 218 RLAWNKQ------------DLRYMATILMDSNKVVILDIRSPTL---PVAELERHRACVNAIAWAPQ---SRRHICSVGD 279 (337)
Q Consensus 218 ~~~~~~~------------~~~~l~~~~~d~~~i~i~d~~~~~~---~~~~~~~~~~~v~~~~~~~~---~~~~l~~~~~ 279 (337)
+++|+|. ++.+|++++.|+. |++||++.... +...+.+|...|.+++|+|+ +. +|++++.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~-~l~s~~~ 229 (379)
T 3jrp_A 152 SASWAPATIEEDGEHNGTKESRKFVTGGADNL-VKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS-YLASVSQ 229 (379)
T ss_dssp EEEECCCC----------CTTCEEEEEETTSC-EEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE-EEEEEET
T ss_pred EEEEcCccccccccccCCCCCCEEEEEeCCCe-EEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCC-eEEEEeC
Confidence 9999995 5899999999999 99999987442 34567789999999999999 77 9999999
Q ss_pred CCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 280 DSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 280 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
||.|++||++.+. .+..........|...|.+++|+|+++.|++++.||.|++|++
T Consensus 230 dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~ 285 (379)
T 3jrp_A 230 DRTCIIWTQDNEQ--GPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 285 (379)
T ss_dssp TSCEEEEEESSTT--SCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEE
T ss_pred CCEEEEEeCCCCC--ccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeC
Confidence 9999999999322 1100111122347889999999999999999999999999984
No 64
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7e-38 Score=263.07 Aligned_cols=250 Identities=18% Similarity=0.256 Sum_probs=195.5
Q ss_pred CCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeee-cC-CCCCcccCCeeEEEeecCCCCeE
Q 038533 67 FDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVL-NN-SKSSEFCAPLTSFDWNEIEPKRI 142 (337)
Q Consensus 67 ~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~-~~-~~~~~~~~~i~~~~~~~~~~~~l 142 (337)
.+|.++|.+++|+|+ +||+|+ | +|++||+..+.......+ .+ |. ..|.+++|+| ++++|
T Consensus 11 ~~h~~~v~~~~~s~~-----------~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~-----~~v~~v~~sp-~~~~l 73 (330)
T 2hes_X 11 KLYKEKIWSFDFSQG-----------ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHK-----KAIRSVAWRP-HTSLL 73 (330)
T ss_dssp ECCSSCEEEEEEETT-----------EEEEEESSSCEEEEECSSSCCEEEEEECTTCCC-----SCEEEEEECT-TSSEE
T ss_pred ccCCCceeeeccCCC-----------EEEEEcCCCEEEEEEecCCCeEEEEEEecCCcc-----CCEEEEEECC-CCCEE
Confidence 589999999999875 566655 6 999999988644455555 33 77 8999999999 99999
Q ss_pred EEeeCCCcEEEEeCCC-------ccchhhhhccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCC-CCceeeecCCCCC
Q 038533 143 GTCSIDTTCTIWDIEK-------GVVETQLIAHDKEVYDICWG-EARVFASVSADGSVRIFDLRDK-EHSTIIYESPQPD 213 (337)
Q Consensus 143 ~~~~~dg~i~v~d~~~-------~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~ 213 (337)
++|+.|+.|++||++. .+.+..+.+|...|.+++|+ ++++|++|+.|++|++||++.. .....+.....|.
T Consensus 74 as~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~ 153 (330)
T 2hes_X 74 AAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHS 153 (330)
T ss_dssp EEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCS
T ss_pred EEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCC
Confidence 9999999999999853 23456678899999999999 7899999999999999999543 2222333334578
Q ss_pred CCceEEEeecCCCcEEEEEEecCCEEEEEECCCCC-CCeEEeecccceeeEEEeCCC--CCCeEEEEcCCCcEEEEeCCC
Q 038533 214 TPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPT-LPVAELERHRACVNAIAWAPQ--SRRHICSVGDDSQAFIWELPL 290 (337)
Q Consensus 214 ~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~dg~i~iw~~~~ 290 (337)
..|.+++|+| ++.+|++++.|+. |++||.+... .++..+.+|...|.+++|+|+ +. +|++|+.|++|++||+..
T Consensus 154 ~~v~~v~~~p-~~~~l~s~s~D~~-i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 154 QDVKHVIWHP-SEALLASSSYDDT-VRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVF-RLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp SCEEEEEECS-SSSEEEEEETTSC-EEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSC-EEEEEETTSCEEEEEEEE
T ss_pred CceEEEEECC-CCCEEEEEcCCCe-EEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCee-EEEEEeCCCeEEEEEecC
Confidence 8999999999 9999999999999 9999987632 467788999999999999998 55 899999999999999973
Q ss_pred CCCCCCCC-CCceeeee-CCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 291 PPVAGPNG-IDPMSMYS-AGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 291 ~~~~~~~~-~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
+....... .....+.. |...|.+++|++++ .|++++.||.|+||++
T Consensus 231 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~ 278 (330)
T 2hes_X 231 DDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEE 278 (330)
T ss_dssp ECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEE
T ss_pred CCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEc
Confidence 21110000 00112223 88999999999876 7999999999999973
No 65
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.6e-37 Score=291.02 Aligned_cols=281 Identities=17% Similarity=0.207 Sum_probs=241.4
Q ss_pred eCCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEE
Q 038533 19 ESPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLAS 96 (337)
Q Consensus 19 ~~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~ 96 (337)
.|...|.+++|+ +++||+|+. +|.|+||++......... ..|..+|.+++|+|++. +|++
T Consensus 11 ~h~~~v~~i~~sp~~~~la~~~~----~g~v~iwd~~~~~~~~~~-----~~~~~~v~~~~~s~~~~---------~l~~ 72 (814)
T 3mkq_A 11 NRSDRVKGIDFHPTEPWVLTTLY----SGRVEIWNYETQVEVRSI-----QVTETPVRAGKFIARKN---------WIIV 72 (814)
T ss_dssp EECSCEEEEEECSSSSEEEEEET----TSEEEEEETTTTEEEEEE-----ECCSSCEEEEEEEGGGT---------EEEE
T ss_pred cCCCceEEEEECCCCCEEEEEeC----CCEEEEEECCCCceEEEE-----ecCCCcEEEEEEeCCCC---------EEEE
Confidence 468899999999 999999996 999999998765433332 57999999999999998 8888
Q ss_pred eC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCc-cchhhhhccCCcee
Q 038533 97 SG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKG-VVETQLIAHDKEVY 173 (337)
Q Consensus 97 ~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~-~~~~~~~~~~~~v~ 173 (337)
++ + .|++||+.++ +....+.+|. ..|++++|+| ++.+|++++.||.|++||++++ .....+.+|...|.
T Consensus 73 ~~~dg~i~vw~~~~~--~~~~~~~~~~-----~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~ 144 (814)
T 3mkq_A 73 GSDDFRIRVFNYNTG--EKVVDFEAHP-----DYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVM 144 (814)
T ss_dssp EETTSEEEEEETTTC--CEEEEEECCS-----SCEEEEEECS-SSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEE
T ss_pred EeCCCeEEEEECCCC--cEEEEEecCC-----CCEEEEEEeC-CCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEE
Confidence 87 5 9999999998 6778888888 9999999999 9999999999999999999887 56677788999999
Q ss_pred EEEeCC--CcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecC-CCcEEEEEEecCCEEEEEECCCCCCC
Q 038533 174 DICWGE--ARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQ-DLRYMATILMDSNKVVILDIRSPTLP 250 (337)
Q Consensus 174 ~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~d~~~i~i~d~~~~~~~ 250 (337)
+++|+| ++.+++++.||.|++||++........... +...+.+++|+|. ++.+|++++.++. |++||+++ ..+
T Consensus 145 ~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~dg~-i~~~d~~~-~~~ 220 (814)
T 3mkq_A 145 CVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTG--QERGVNYVDYYPLPDKPYMITASDDLT-IKIWDYQT-KSC 220 (814)
T ss_dssp EEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECC--CTTCCCEEEECCSTTCCEEEEECTTSE-EEEEETTT-TEE
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecC--CCCCEEEEEEEECCCCCEEEEEeCCCE-EEEEECCC-CcE
Confidence 999994 679999999999999999887765554433 4578999999873 6789999999998 99999988 567
Q ss_pred eEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCce-EEEEcC
Q 038533 251 VAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDW-LAIAFS 329 (337)
Q Consensus 251 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d 329 (337)
+..+.+|...|.+++|+|+++ +|++++.||.|++||+. + +.....+..|...+.+++|+|++..+ ++++.+
T Consensus 221 ~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~v~vwd~~--~-----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 292 (814)
T 3mkq_A 221 VATLEGHMSNVSFAVFHPTLP-IIISGSEDGTLKIWNSS--T-----YKVEKTLNVGLERSWCIATHPTGRKNYIASGFD 292 (814)
T ss_dssp EEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETT--T-----CSEEEEECCSSSSEEEEEECTTCGGGEEEEEET
T ss_pred EEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCeEEEEECC--C-----CcEEEEeecCCCcEEEEEEccCCCceEEEEEeC
Confidence 888889999999999999999 99999999999999998 3 12244666788899999999998764 777788
Q ss_pred CcEEEEeC
Q 038533 330 NKMQLLKV 337 (337)
Q Consensus 330 ~~i~iw~l 337 (337)
+.+.+|++
T Consensus 293 ~~~~~~~~ 300 (814)
T 3mkq_A 293 NGFTVLSL 300 (814)
T ss_dssp TEEEEEEC
T ss_pred CCEEEEEc
Confidence 88888874
No 66
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=3.1e-38 Score=272.56 Aligned_cols=285 Identities=17% Similarity=0.258 Sum_probs=222.5
Q ss_pred CceeEEEEec---ceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecC-CCCcccCcCCccEEEEe
Q 038533 22 YPLYAMAVCG---QRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDP-NSSSRKSSSNRHLLASS 97 (337)
Q Consensus 22 ~~v~~~~~s~---~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~-~~~~~~~~~~~~~l~~~ 97 (337)
.....+++++ .++++|+. +|.|+||+++........... ..+|...|.+++|+| ++. +|++|
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~----~g~i~v~~~~~~~~~~~~~~~-~~~h~~~V~~~~~~p~~~~---------~l~s~ 100 (402)
T 2aq5_A 35 WDSGFCAVNPKFMALICEASG----GGAFLVLPLGKTGRVDKNVPL-VCGHTAPVLDIAWCPHNDN---------VIASG 100 (402)
T ss_dssp CSSCSEEECSSEEEEEBCCSS----SCCEEEEETTCCEECCTTCCC-BCCCSSCEEEEEECTTCTT---------EEEEE
T ss_pred cCCCcEEECCCeEEEEEEEcC----CCEEEEEECccCCCCCCCCce-EecCCCCEEEEEeCCCCCC---------EEEEE
Confidence 4455677773 23334564 999999998765432222112 368999999999999 777 88888
Q ss_pred C-C-eEEEEecCCCCc-----cceeeecCCCCCcccCCeeEEEeecCCC-CeEEEeeCCCcEEEEeCCCccchhhh--hc
Q 038533 98 G-D-FLRLWDVGDSSI-----EPVAVLNNSKSSEFCAPLTSFDWNEIEP-KRIGTCSIDTTCTIWDIEKGVVETQL--IA 167 (337)
Q Consensus 98 ~-~-~v~vw~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~~~~~dg~i~v~d~~~~~~~~~~--~~ 167 (337)
+ | .|++||+.++.. ++...+.+|. ..|.+++|+| ++ ++|++++.||.|++||+++++.+..+ ..
T Consensus 101 s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~-----~~v~~~~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 174 (402)
T 2aq5_A 101 SEDCTVMVWEIPDGGLVLPLREPVITLEGHT-----KRVGIVAWHP-TAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDV 174 (402)
T ss_dssp ETTSEEEEEECCTTCCSSCBCSCSEEEECCS-----SCEEEEEECS-SBTTEEEEEETTSCEEEEETTTTEEEEEECTTT
T ss_pred eCCCeEEEEEccCCCCccccCCceEEecCCC-----CeEEEEEECc-CCCCEEEEEcCCCEEEEEECCCCCccEEEecCC
Confidence 7 5 999999998743 4567888888 9999999999 65 79999999999999999999988888 78
Q ss_pred cCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCC-CceEEEeecCCCcEEEEE---EecCCEEEEE
Q 038533 168 HDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDT-PLLRLAWNKQDLRYMATI---LMDSNKVVIL 242 (337)
Q Consensus 168 ~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~l~~~---~~d~~~i~i~ 242 (337)
|...|.+++|+ ++++|++++.||.|++||+++++....+... |.. .+.++.|+| ++.+|+++ +.++. |++|
T Consensus 175 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~l~~g~~~~~d~~-i~iw 250 (402)
T 2aq5_A 175 HPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRP--HEGTRPVHAVFVS-EGKILTTGFSRMSERQ-VALW 250 (402)
T ss_dssp CCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECS--SCSSSCCEEEECS-TTEEEEEEECTTCCEE-EEEE
T ss_pred CCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccC--CCCCcceEEEEcC-CCcEEEEeccCCCCce-EEEE
Confidence 99999999999 7899999999999999999988755444222 444 489999999 89999998 67777 9999
Q ss_pred ECCCCCCCeEEee-cccceeeEEEeCCCCCCeE-EEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCC
Q 038533 243 DIRSPTLPVAELE-RHRACVNAIAWAPQSRRHI-CSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQ 320 (337)
Q Consensus 243 d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 320 (337)
|+++...++.... .|...+.+++|+|+++ +| ++|+.||.|++||+..++ . ....+....|..+|.+++|+|++
T Consensus 251 d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~g~~dg~i~i~d~~~~~--~--~~~~l~~~~~~~~v~~~~~sp~~ 325 (402)
T 2aq5_A 251 DTKHLEEPLSLQELDTSSGVLLPFFDPDTN-IVYLCGKGDSSIRYFEITSEA--P--FLHYLSMFSSKESQRGMGYMPKR 325 (402)
T ss_dssp ETTBCSSCSEEEECCCCSSCEEEEEETTTT-EEEEEETTCSCEEEEEECSST--T--CEEEEEEECCSSCCSEEEECCGG
T ss_pred cCccccCCceEEeccCCCceeEEEEcCCCC-EEEEEEcCCCeEEEEEecCCC--c--ceEeecccccCCcccceEEeccc
Confidence 9998655454443 5677899999999999 66 467789999999998322 0 00012223356899999999999
Q ss_pred CceEEEEcCCcEEEEeC
Q 038533 321 PDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 321 ~~l~~~~~d~~i~iw~l 337 (337)
..++ +.++.+++|++
T Consensus 326 ~~~~--s~~~~~~~~~l 340 (402)
T 2aq5_A 326 GLEV--NKCEIARFYKL 340 (402)
T ss_dssp GSCG--GGTEEEEEEEE
T ss_pred ccce--ecceeEEEEEc
Confidence 7655 36779999974
No 67
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.5e-37 Score=270.86 Aligned_cols=274 Identities=17% Similarity=0.283 Sum_probs=228.6
Q ss_pred CCCceeEEEEecceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-
Q 038533 20 SPYPLYAMAVCGQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG- 98 (337)
Q Consensus 20 ~~~~v~~~~~s~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~- 98 (337)
+...|+|++|.+++|++|+. ||.|++|++......... .+|...|.+++| ++. +|++|+
T Consensus 132 ~~~~v~~~~~d~~~l~~g~~----dg~i~iwd~~~~~~~~~~-----~~h~~~v~~l~~--~~~---------~l~sg~~ 191 (435)
T 1p22_A 132 TSKGVYCLQYDDQKIVSGLR----DNTIKIWDKNTLECKRIL-----TGHTGSVLCLQY--DER---------VIITGSS 191 (435)
T ss_dssp SCCCEEEEECCSSEEEEEES----SSCEEEEESSSCCEEEEE-----CCCSSCEEEEEC--CSS---------EEEEEET
T ss_pred CCCcEEEEEECCCEEEEEeC----CCeEEEEeCCCCeEEEEE-----cCCCCcEEEEEE--CCC---------EEEEEcC
Confidence 45679999999999999997 999999998765544333 689999999999 566 778777
Q ss_pred C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccch---hhhhccCCceeE
Q 038533 99 D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVE---TQLIAHDKEVYD 174 (337)
Q Consensus 99 ~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~---~~~~~~~~~v~~ 174 (337)
| .|++||+.++ +....+.+|. ..|.+++|++ +.+++|+.||.|++||+++++.. ..+.+|...|.+
T Consensus 192 dg~i~vwd~~~~--~~~~~~~~h~-----~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~ 261 (435)
T 1p22_A 192 DSTVRVWDVNTG--EMLNTLIHHC-----EAVLHLRFNN---GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 261 (435)
T ss_dssp TSCEEEEESSSC--CEEEEECCCC-----SCEEEEECCT---TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEE
T ss_pred CCeEEEEECCCC--cEEEEEcCCC-----CcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEE
Confidence 5 9999999998 6788888888 8999999964 69999999999999999988755 566789999999
Q ss_pred EEeCCCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEe
Q 038533 175 ICWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAEL 254 (337)
Q Consensus 175 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~ 254 (337)
++| +++++++|+.||.|++||+++++....+. .|...+.++.| ++.++++++.|+. |++||+++ +.++..+
T Consensus 262 ~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~---~~~~~v~~~~~---~~~~l~~g~~dg~-i~iwd~~~-~~~~~~~ 332 (435)
T 1p22_A 262 VDF-DDKYIVSASGDRTIKVWNTSTCEFVRTLN---GHKRGIACLQY---RDRLVVSGSSDNT-IRLWDIEC-GACLRVL 332 (435)
T ss_dssp EEE-ETTEEEEEETTSEEEEEETTTCCEEEEEE---CCSSCEEEEEE---ETTEEEEEETTSC-EEEEETTT-CCEEEEE
T ss_pred EEe-CCCEEEEEeCCCeEEEEECCcCcEEEEEc---CCCCcEEEEEe---CCCEEEEEeCCCe-EEEEECCC-CCEEEEE
Confidence 999 68899999999999999999987554443 46788999998 4689999999999 99999998 6778899
Q ss_pred ecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCC-CCCC-CceeeeeCCCceeEEEEccCCCceEEEEcCCcE
Q 038533 255 ERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAG-PNGI-DPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKM 332 (337)
Q Consensus 255 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~-~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 332 (337)
.+|...|.+++| ++. +|++|+.||.|++||+..+.... +... ....+.+|...|.+++| ++..+++++.||.|
T Consensus 333 ~~h~~~v~~~~~--~~~-~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i 407 (435)
T 1p22_A 333 EGHEELVRCIRF--DNK-RIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTI 407 (435)
T ss_dssp CCCSSCEEEEEC--CSS-EEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEE
T ss_pred eCCcCcEEEEEe--cCC-EEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEE
Confidence 999999999999 566 99999999999999997322111 0011 23356789999999999 67789999999999
Q ss_pred EEEeC
Q 038533 333 QLLKV 337 (337)
Q Consensus 333 ~iw~l 337 (337)
++|++
T Consensus 408 ~iwd~ 412 (435)
T 1p22_A 408 LIWDF 412 (435)
T ss_dssp EEEC-
T ss_pred EEEEC
Confidence 99985
No 68
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.5e-37 Score=259.17 Aligned_cols=240 Identities=20% Similarity=0.323 Sum_probs=203.9
Q ss_pred CCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEE
Q 038533 67 FDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGT 144 (337)
Q Consensus 67 ~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 144 (337)
.+|...|.+++|+|+++ +|++++ | .|++|++.++ +....+.+|. ..|.+++|+| ++++|++
T Consensus 20 ~gh~~~v~~~~~s~~~~---------~l~s~~~dg~i~iw~~~~~--~~~~~~~~h~-----~~v~~~~~~~-~~~~l~s 82 (312)
T 4ery_A 20 AGHTKAVSSVKFSPNGE---------WLASSSADKLIKIWGAYDG--KFEKTISGHK-----LGISDVAWSS-DSNLLVS 82 (312)
T ss_dssp CCCSSCEEEEEECTTSS---------EEEEEETTSCEEEEETTTC--CEEEEECCCS-----SCEEEEEECT-TSSEEEE
T ss_pred cccCCcEEEEEECCCCC---------EEEEeeCCCeEEEEeCCCc--ccchhhccCC-----CceEEEEEcC-CCCEEEE
Confidence 68999999999999998 888877 5 9999999988 5677888888 8999999999 9999999
Q ss_pred eeCCCcEEEEeCCCccchhhhhccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeec
Q 038533 145 CSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNK 223 (337)
Q Consensus 145 ~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~ 223 (337)
|+.|+.|++||+++++.+..+.+|...|.+++|+ ++++|++++.|+.|++||+++++....+ ..|..++.+++|+|
T Consensus 83 ~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~---~~~~~~v~~~~~~~ 159 (312)
T 4ery_A 83 ASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL---PAHSDPVSAVHFNR 159 (312)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEE---CCCSSCEEEEEECT
T ss_pred ECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEe---cCCCCcEEEEEEcC
Confidence 9999999999999999999999999999999999 7899999999999999999988754433 34678999999999
Q ss_pred CCCcEEEEEEecCCEEEEEECCCCCCCeEEe-ecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCce
Q 038533 224 QDLRYMATILMDSNKVVILDIRSPTLPVAEL-ERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPM 302 (337)
Q Consensus 224 ~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~ 302 (337)
++.+|++++.|+. |++||+++ .+.+..+ ..+...+..++|+|+++ +|++++.||.|++||++ + +....
T Consensus 160 -~~~~l~~~~~d~~-i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~--~-----~~~~~ 228 (312)
T 4ery_A 160 -DGSLIVSSSYDGL-CRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPNGK-YILAATLDNTLKLWDYS--K-----GKCLK 228 (312)
T ss_dssp -TSSEEEEEETTSC-EEEEETTT-CCEEEEECCSSCCCEEEEEECTTSS-EEEEEETTTEEEEEETT--T-----TEEEE
T ss_pred -CCCEEEEEeCCCc-EEEEECCC-CceeeEEeccCCCceEEEEECCCCC-EEEEEcCCCeEEEEECC--C-----CcEEE
Confidence 9999999999999 99999998 4445544 45567899999999999 99999999999999998 3 11233
Q ss_pred eeeeCCCcee--EEEEc-cCCCceEEEEcCCcEEEEeC
Q 038533 303 SMYSAGSEIN--QLQWS-PAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 303 ~~~~~~~~v~--~~~~~-~~~~~l~~~~~d~~i~iw~l 337 (337)
.+.+|...+. ...++ +++.++++++.||.|++|++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~ 266 (312)
T 4ery_A 229 TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 266 (312)
T ss_dssp EECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEET
T ss_pred EEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEEC
Confidence 4555654432 23344 67777888899999999985
No 69
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=5e-37 Score=259.02 Aligned_cols=275 Identities=13% Similarity=0.132 Sum_probs=226.6
Q ss_pred eCCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEE
Q 038533 19 ESPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLAS 96 (337)
Q Consensus 19 ~~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~ 96 (337)
.|...|++++|+ +++|++|+. |+.|+||+++........ .....|...|.+++|+|++. .+|++
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~----d~~v~iw~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~--------~~l~~ 74 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSW----DGSLTVYKFDIQAKNVDL--LQSLRYKHPLLCCNFIDNTD--------LQIYV 74 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEET----TSEEEEEEEETTTTEEEE--EEEEECSSCEEEEEEEESSS--------EEEEE
T ss_pred CCCCcEEEEEEcCCCCEEEEEcC----CCeEEEEEeCCCCccccc--eeeeecCCceEEEEECCCCC--------cEEEE
Confidence 578899999999 889999997 999999999876522211 11258999999999999863 26666
Q ss_pred eC-C-eEEEEec-CCCCccceeeecC--CCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCC---------ccch
Q 038533 97 SG-D-FLRLWDV-GDSSIEPVAVLNN--SKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEK---------GVVE 162 (337)
Q Consensus 97 ~~-~-~v~vw~~-~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~---------~~~~ 162 (337)
++ + .|++||+ .+++ ...+.+ |. ..|.+++|+| ++++++++.|+.|++||+++ ++++
T Consensus 75 ~~~dg~i~~wd~~~~~~---~~~~~~~~~~-----~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 144 (342)
T 1yfq_A 75 GTVQGEILKVDLIGSPS---FQALTNNEAN-----LGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNS 144 (342)
T ss_dssp EETTSCEEEECSSSSSS---EEECBSCCCC-----SCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCS
T ss_pred EcCCCeEEEEEeccCCc---eEeccccCCC-----CceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCee
Confidence 66 5 9999999 8763 356677 77 8999999998 78999999999999999988 7777
Q ss_pred hhhhccCCceeEEEeCCCcEEEEEcCCCeEEEEECCC-CCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEE
Q 038533 163 TQLIAHDKEVYDICWGEARVFASVSADGSVRIFDLRD-KEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVI 241 (337)
Q Consensus 163 ~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i 241 (337)
..+. |...|.+++|++.. +++++.|+.|++||+++ .......... .+...+.+++|+|.++.++++++.++. |++
T Consensus 145 ~~~~-~~~~v~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~i~~i~~~~~~~~~l~~~~~dg~-i~i 220 (342)
T 1yfq_A 145 NNTK-VKNKIFTMDTNSSR-LIVGMNNSQVQWFRLPLCEDDNGTIEES-GLKYQIRDVALLPKEQEGYACSSIDGR-VAV 220 (342)
T ss_dssp SSSS-SCCCEEEEEECSSE-EEEEESTTEEEEEESSCCTTCCCEEEEC-SCSSCEEEEEECSGGGCEEEEEETTSE-EEE
T ss_pred eEEe-eCCceEEEEecCCc-EEEEeCCCeEEEEECCccccccceeeec-CCCCceeEEEECCCCCCEEEEEecCCc-EEE
Confidence 7777 88999999999544 99999999999999998 5533222222 466789999999745789999999998 999
Q ss_pred EECCCC-----CCCeEEeecccc---------eeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeC
Q 038533 242 LDIRSP-----TLPVAELERHRA---------CVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSA 307 (337)
Q Consensus 242 ~d~~~~-----~~~~~~~~~~~~---------~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~ 307 (337)
||++.. ..+...+..|.. .|.+++|+|+++ +|++++.||.|++||+. + +.....+..|
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~vwd~~--~-----~~~~~~~~~~ 292 (342)
T 1yfq_A 221 EFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHK-FLYTAGSDGIISCWNLQ--T-----RKKIKNFAKF 292 (342)
T ss_dssp EECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTC-CEEEEETTSCEEEEETT--T-----TEEEEECCCC
T ss_pred EEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCC-EEEEecCCceEEEEcCc--c-----HhHhhhhhcc
Confidence 999885 367788888865 999999999999 99999999999999998 3 2223456677
Q ss_pred -CCceeEEEEccCCCceEEEEcCCc
Q 038533 308 -GSEINQLQWSPAQPDWLAIAFSNK 331 (337)
Q Consensus 308 -~~~v~~~~~~~~~~~l~~~~~d~~ 331 (337)
..+|.+++ |+++.|++++.||.
T Consensus 293 h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 293 NEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp SSSEEEEEE--ECSSEEEEEEECTH
T ss_pred cCCCceEec--CCCCeEEEEecCCc
Confidence 99999999 99999999999998
No 70
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=5.4e-37 Score=299.48 Aligned_cols=283 Identities=17% Similarity=0.291 Sum_probs=242.0
Q ss_pred eeCCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEE
Q 038533 18 HESPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLA 95 (337)
Q Consensus 18 ~~~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~ 95 (337)
..|.+.|++++|+ +++||+|+. ||.|+||++......... .+|...|.+++|+|++. +|+
T Consensus 612 ~~h~~~v~~~~~s~~~~~l~s~~~----d~~i~vw~~~~~~~~~~~-----~~h~~~v~~~~~s~~~~---------~l~ 673 (1249)
T 3sfz_A 612 RPHTDAVYHACFSQDGQRIASCGA----DKTLQVFKAETGEKLLDI-----KAHEDEVLCCAFSSDDS---------YIA 673 (1249)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTCCEEEEE-----CCCSSCEEEEEECTTSS---------EEE
T ss_pred ecccccEEEEEECCCCCEEEEEeC----CCeEEEEECCCCCEEEEe-----ccCCCCEEEEEEecCCC---------EEE
Confidence 3578999999999 999999997 999999998776544443 68999999999999998 888
Q ss_pred EeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecC-CCCeEEEeeCCCcEEEEeCCCccchhhhhccCCce
Q 038533 96 SSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEI-EPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEV 172 (337)
Q Consensus 96 ~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v 172 (337)
+++ | .|++||+.++ +.+..+.+|. ..|.+++|+|. +..++++|+.||.|++||+++++.+..+.+|...|
T Consensus 674 s~~~d~~v~vwd~~~~--~~~~~~~~~~-----~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v 746 (1249)
T 3sfz_A 674 TCSADKKVKIWDSATG--KLVHTYDEHS-----EQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSV 746 (1249)
T ss_dssp EEETTSEEEEEETTTC--CEEEEEECCS-----SCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCE
T ss_pred EEeCCCeEEEEECCCC--ceEEEEcCCC-----CcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCE
Confidence 877 5 9999999998 6788888988 99999999983 34589999999999999999999999999999999
Q ss_pred eEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecC----------CCCCCCceEEEeecCCCcEEEEEEecCCEEEE
Q 038533 173 YDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYES----------PQPDTPLLRLAWNKQDLRYMATILMDSNKVVI 241 (337)
Q Consensus 173 ~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~----------~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i 241 (337)
.+++|+ +++++++++.||.|++||+++++....+... ......+.+++|+| ++..+++++ ++. +.+
T Consensus 747 ~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-dg~~l~~~~-~~~-v~~ 823 (1249)
T 3sfz_A 747 NHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSA-DGDKIIVAA-KNK-VLL 823 (1249)
T ss_dssp EEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCT-TSSEEEEEE-TTE-EEE
T ss_pred EEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECC-CCCEEEEEc-CCc-EEE
Confidence 999999 7899999999999999999887644333211 11234788999999 999998877 566 999
Q ss_pred EECCCCCCCeEEe-ecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCC
Q 038533 242 LDIRSPTLPVAEL-ERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQ 320 (337)
Q Consensus 242 ~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 320 (337)
||+.+.. .+..+ .+|...|.+++|+|++. ++++++.||.|++|++. + +.....+.+|...|.+++|+|++
T Consensus 824 ~d~~~~~-~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~dg~v~vwd~~--~-----~~~~~~~~~h~~~v~~v~~spdg 894 (1249)
T 3sfz_A 824 FDIHTSG-LLAEIHTGHHSTIQYCDFSPYDH-LAVIALSQYCVELWNID--S-----RLKVADCRGHLSWVHGVMFSPDG 894 (1249)
T ss_dssp EETTTCC-EEEEEECSSSSCCCEEEECSSTT-EEEEECSSSCEEEEETT--T-----TEEEEEECCCSSCEEEEEECTTS
T ss_pred EEecCCC-ceeEEcCCCCCceEEEEEcCCCC-EEEEEeCCCeEEEEEcC--C-----CceeeecCCCccceEEEEECCCC
Confidence 9999844 44444 48899999999999999 99999999999999998 3 22345677899999999999999
Q ss_pred CceEEEEcCCcEEEEeC
Q 038533 321 PDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 321 ~~l~~~~~d~~i~iw~l 337 (337)
+.+++++.|+.|++|++
T Consensus 895 ~~l~s~s~dg~v~vw~~ 911 (1249)
T 3sfz_A 895 SSFLTASDDQTIRVWET 911 (1249)
T ss_dssp SEEEEEETTSCEEEEEH
T ss_pred CEEEEEeCCCeEEEEEc
Confidence 99999999999999973
No 71
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-36 Score=285.39 Aligned_cols=202 Identities=11% Similarity=0.111 Sum_probs=165.8
Q ss_pred cceeeeeCCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCC
Q 038533 13 ENSVTHESPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSN 90 (337)
Q Consensus 13 ~~~~~~~~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~ 90 (337)
.....+.|...|++++|+ +++||+|+. ||.|+||+..... ... ...|..+|.+++|+| +.
T Consensus 9 ~~~~~~gh~~~V~~lafspdg~~lAsgs~----Dg~I~lw~~~~~~--~~~----~~~~~~~V~~l~fsp-g~------- 70 (902)
T 2oaj_A 9 AETNKYGMSSKPIAAAFDFTQNLLAIATV----TGEVHIYGQQQVE--VVI----KLEDRSAIKEMRFVK-GI------- 70 (902)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEET----TSEEEEECSTTCE--EEE----ECSSCCCEEEEEEET-TT-------
T ss_pred ccccccCCCCCcEEEEECCCCCEEEEEeC----CCEEEEEeCCCcE--EEE----EcCCCCCEEEEEEcC-CC-------
Confidence 345567789999999999 899999997 9999999765432 221 246888999999999 77
Q ss_pred ccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccch------
Q 038533 91 RHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVE------ 162 (337)
Q Consensus 91 ~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~------ 162 (337)
+|++++ | +|++||+.++ +++..+. |. ..|++++|+| +++++++|+.||.|++||+++++..
T Consensus 71 --~L~S~s~D~~v~lWd~~~~--~~~~~~~-~~-----~~V~~v~~sp-~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~ 139 (902)
T 2oaj_A 71 --YLVVINAKDTVYVLSLYSQ--KVLTTVF-VP-----GKITSIDTDA-SLDWMLIGLQNGSMIVYDIDRDQLSSFKLDN 139 (902)
T ss_dssp --EEEEEETTCEEEEEETTTC--SEEEEEE-CS-----SCEEEEECCT-TCSEEEEEETTSCEEEEETTTTEEEEEEECC
T ss_pred --EEEEEECcCeEEEEECCCC--cEEEEEc-CC-----CCEEEEEECC-CCCEEEEEcCCCcEEEEECCCCccccceecc
Confidence 788877 5 9999999988 4566665 44 7899999999 9999999999999999999887643
Q ss_pred -----hhhhccCCceeEEEeCC--CcEEEEEcCCCeEEEEECCCCCCceeeecC---------------CCCCCCceEEE
Q 038533 163 -----TQLIAHDKEVYDICWGE--ARVFASVSADGSVRIFDLRDKEHSTIIYES---------------PQPDTPLLRLA 220 (337)
Q Consensus 163 -----~~~~~~~~~v~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---------------~~~~~~i~~~~ 220 (337)
..+.+|.+.|.+++|+| +..+++|+.||.| +||+++.+....+... ..|...|.+++
T Consensus 140 ~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~ 218 (902)
T 2oaj_A 140 LQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSL 218 (902)
T ss_dssp HHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEE
T ss_pred ccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEE
Confidence 34567899999999995 4789999999999 9999987654433211 12346799999
Q ss_pred eecCCCcEEEEEEecCCEEEEEECCC
Q 038533 221 WNKQDLRYMATILMDSNKVVILDIRS 246 (337)
Q Consensus 221 ~~~~~~~~l~~~~~d~~~i~i~d~~~ 246 (337)
|+| ++.+|++++.|+. |++||+++
T Consensus 219 fsp-dg~~lasgs~Dg~-i~lWd~~~ 242 (902)
T 2oaj_A 219 YHP-NSLHIITIHEDNS-LVFWDANS 242 (902)
T ss_dssp ECT-TSSEEEEEETTCC-EEEEETTT
T ss_pred EcC-CCCEEEEEECCCe-EEEEECCC
Confidence 999 8999999999999 99999875
No 72
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=9.4e-37 Score=259.60 Aligned_cols=287 Identities=16% Similarity=0.202 Sum_probs=225.5
Q ss_pred Cccceeee-eCCCceeEEEEe-c----ceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCc
Q 038533 11 RSENSVTH-ESPYPLYAMAVC-G----QRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSS 84 (337)
Q Consensus 11 ~~~~~~~~-~~~~~v~~~~~s-~----~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~ 84 (337)
+.+++..+ .|...|++++|+ . ++||+|+. ||.|+||+++........ . ...|...|.+++|+|++.
T Consensus 28 ~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~----dg~i~iw~~~~~~~~~~~--~-~~~h~~~v~~~~~~~~~~- 99 (368)
T 3mmy_A 28 PMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSW----ANDVRCWEVQDSGQTIPK--A-QQMHTGPVLDVCWSDDGS- 99 (368)
T ss_dssp TTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEET----TSEEEEEEECTTSCEEEE--E-EEECSSCEEEEEECTTSS-
T ss_pred CcceeEeccCCCCceEEEEEcCCCCCceEEEEECC----CCcEEEEEcCCCCceeEE--E-eccccCCEEEEEECcCCC-
Confidence 34445444 468999999999 3 89999996 999999999874444321 1 267999999999999998
Q ss_pred ccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEe--ecCCCCeEEEeeCCCcEEEEeCCCcc
Q 038533 85 RKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDW--NEIEPKRIGTCSIDTTCTIWDIEKGV 160 (337)
Q Consensus 85 ~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~l~~~~~dg~i~v~d~~~~~ 160 (337)
+|++++ | .|++||+.+++ ... +..|. ..|.+++| +| ++.+|++++.||.|++||+++++
T Consensus 100 --------~l~s~~~dg~v~iwd~~~~~--~~~-~~~~~-----~~v~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 100 --------KVFTASCDKTAKMWDLSSNQ--AIQ-IAQHD-----APVKTIHWIKAP-NYSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp --------EEEEEETTSEEEEEETTTTE--EEE-EEECS-----SCEEEEEEEECS-SCEEEEEEETTSEEEEECSSCSS
T ss_pred --------EEEEEcCCCcEEEEEcCCCC--cee-ecccc-----CceEEEEEEeCC-CCCEEEEccCCCcEEEEECCCCc
Confidence 888877 5 99999999883 333 45576 89999999 77 88899999999999999999999
Q ss_pred chhhhhccCCceeEEEeCCCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcE----EEEEEecC
Q 038533 161 VETQLIAHDKEVYDICWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRY----MATILMDS 236 (337)
Q Consensus 161 ~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----l~~~~~d~ 236 (337)
.+..+..+. .+.++.+. ...+++++.++.+++||++........... .......++.+.+ +... +++++.|+
T Consensus 163 ~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~dg 238 (368)
T 3mmy_A 163 PMMVLQLPE-RCYCADVI-YPMAVVATAERGLIVYQLENQPSEFRRIES-PLKHQHRCVAIFK-DKQNKPTGFALGSIEG 238 (368)
T ss_dssp CSEEEECSS-CEEEEEEE-TTEEEEEEGGGCEEEEECSSSCEEEEECCC-SCSSCEEEEEEEE-CTTSCEEEEEEEETTS
T ss_pred EEEEEecCC-CceEEEec-CCeeEEEeCCCcEEEEEeccccchhhhccc-cccCCCceEEEcc-cCCCCCCeEEEecCCC
Confidence 888887554 56666665 447888888999999999887643333222 3345666777665 4443 99999999
Q ss_pred CEEEEEECCCCC--CCeEEeecccc------------eeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCce
Q 038533 237 NKVVILDIRSPT--LPVAELERHRA------------CVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPM 302 (337)
Q Consensus 237 ~~i~i~d~~~~~--~~~~~~~~~~~------------~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~ 302 (337)
. |++||++... ..+..+..|.. .|++++|+|+++ +|++++.||.|++||+. + +....
T Consensus 239 ~-i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~s~~~dg~i~iwd~~--~-----~~~~~ 309 (368)
T 3mmy_A 239 R-VAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHG-TLATVGSDGRFSFWDKD--A-----RTKLK 309 (368)
T ss_dssp E-EEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTC-CEEEEETTSCEEEEETT--T-----TEEEE
T ss_pred c-EEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCC-EEEEEccCCeEEEEECC--C-----CcEEE
Confidence 8 9999998743 34566777765 799999999998 99999999999999999 3 22244
Q ss_pred eeeeCCCceeEEEEccCCCceEEEEcCCcEEEE
Q 038533 303 SMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLL 335 (337)
Q Consensus 303 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw 335 (337)
.+..|..+|.+++|+|++++|++++.|+..+.|
T Consensus 310 ~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~ 342 (368)
T 3mmy_A 310 TSEQLDQPISACCFNHNGNIFAYASSYDWSKGH 342 (368)
T ss_dssp ECCCCSSCEEEEEECTTSSCEEEEECCCSTTCG
T ss_pred EecCCCCCceEEEECCCCCeEEEEecccccccc
Confidence 666889999999999999999999988754443
No 73
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=4.7e-36 Score=258.92 Aligned_cols=287 Identities=13% Similarity=0.172 Sum_probs=222.7
Q ss_pred eCCCceeEEEEe---cceEEEeeeeccCcceEEEEEecCCCcceecC--------CCcCCCCCCCCeEEEecC-CCCccc
Q 038533 19 ESPYPLYAMAVC---GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTH--------PSLSFDHPYPPTKLMFDP-NSSSRK 86 (337)
Q Consensus 19 ~~~~~v~~~~~s---~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~--------~~~~~~~~~~i~~i~~~~-~~~~~~ 86 (337)
.|.++|++++|+ +++||+|+. ||.|++|+++......... ......|...|.+++|+| ++.
T Consensus 41 ~h~~~v~~~~~s~~~~~~l~~~~~----dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--- 113 (408)
T 4a11_B 41 IHGGGINTLDIEPVEGRYMLSGGS----DGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTG--- 113 (408)
T ss_dssp CCSSCEEEEEECTTTCCEEEEEET----TSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTT---
T ss_pred ccCCcEEEEEEecCCCCEEEEEcC----CCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCc---
Confidence 478999999998 799999997 9999999998655432220 001135999999999999 555
Q ss_pred CcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecC--CCCeEEEeeCCCcEEEEeCCCccch
Q 038533 87 SSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEI--EPKRIGTCSIDTTCTIWDIEKGVVE 162 (337)
Q Consensus 87 ~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~l~~~~~dg~i~v~d~~~~~~~ 162 (337)
+|++++ + .|++||+.++ +....+. +. ..+.++.|++. ++.++++++.||.|++||+++++.+
T Consensus 114 ------~l~s~~~d~~i~iwd~~~~--~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 179 (408)
T 4a11_B 114 ------MFTSSSFDKTLKVWDTNTL--QTADVFN-FE-----ETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCS 179 (408)
T ss_dssp ------CEEEEETTSEEEEEETTTT--EEEEEEE-CS-----SCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCC
T ss_pred ------EEEEEeCCCeEEEeeCCCC--ccceecc-CC-----CceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCccee
Confidence 777776 5 9999999998 4555554 33 78999999883 2349999999999999999999988
Q ss_pred hhhhccCCceeEEEeC-CCc-EEEEEcCCCeEEEEECCCCCCceeee-------------cCCCCCCCceEEEeecCCCc
Q 038533 163 TQLIAHDKEVYDICWG-EAR-VFASVSADGSVRIFDLRDKEHSTIIY-------------ESPQPDTPLLRLAWNKQDLR 227 (337)
Q Consensus 163 ~~~~~~~~~v~~~~~~-~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~-------------~~~~~~~~i~~~~~~~~~~~ 227 (337)
..+..|...|.+++|+ ++. ++++++.||.|++||++......... ....|...+.+++|+| ++.
T Consensus 180 ~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~ 258 (408)
T 4a11_B 180 HILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS-DGL 258 (408)
T ss_dssp EEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT-TSS
T ss_pred eeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC-CCC
Confidence 8999999999999999 555 69999999999999998775322222 1134678999999999 999
Q ss_pred EEEEEEecCCEEEEEECCCCCCCeEEeecc-----cceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCce
Q 038533 228 YMATILMDSNKVVILDIRSPTLPVAELERH-----RACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPM 302 (337)
Q Consensus 228 ~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~ 302 (337)
+|++++.|+. |++||+++.. .......+ ...+........+. .+++++.|+.|++||+. + +....
T Consensus 259 ~l~~~~~dg~-i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~d~~--~-----~~~~~ 328 (408)
T 4a11_B 259 HLLTVGTDNR-MRLWNSSNGE-NTLVNYGKVCNNSKKGLKFTVSCGCSS-EFVFVPYGSTIAVYTVY--S-----GEQIT 328 (408)
T ss_dssp EEEEEETTSC-EEEEETTTCC-BCCCCCCCCCCCCSSCCCCEECCSSSS-CEEEEEETTEEEEEETT--T-----CCEEE
T ss_pred EEEEecCCCe-EEEEECCCCc-cceeccccccccccccceeEEecCCCc-eEEEEecCCEEEEEECc--C-----Cccee
Confidence 9999999999 9999999843 22222211 11222222223334 67777889999999998 3 22344
Q ss_pred eeeeCCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 303 SMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 303 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
.+.+|...|.+++|+|+++.|++++.||.|++|++
T Consensus 329 ~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~ 363 (408)
T 4a11_B 329 MLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVP 363 (408)
T ss_dssp EECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred eeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeC
Confidence 66789999999999999999999999999999984
No 74
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=8.4e-37 Score=281.18 Aligned_cols=244 Identities=18% Similarity=0.291 Sum_probs=207.5
Q ss_pred CCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCc---cceeeecCCCCCcccCCeeEEEeecCCCCe
Q 038533 67 FDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSI---EPVAVLNNSKSSEFCAPLTSFDWNEIEPKR 141 (337)
Q Consensus 67 ~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 141 (337)
.+|.+.|++++|+|++. .+|++|+ | +|++|++.+... .....+.+|. ..|.+++|+| ++++
T Consensus 379 ~~H~~~V~~v~~~~~~~--------~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~-----~~v~~v~~s~-~g~~ 444 (694)
T 3dm0_A 379 RAHTDMVTAIATPIDNA--------DIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHS-----HFVEDVVLSS-DGQF 444 (694)
T ss_dssp ECCSSCEEEEECCTTCC--------SEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCS-----SCEEEEEECT-TSSE
T ss_pred ccCCceeEEEEecCCCC--------CEEEEEeCCCcEEEEEccCCCcccccccceecCCC-----CcEEEEEECC-CCCE
Confidence 68999999999999864 4898887 5 999999986531 3456788888 9999999999 9999
Q ss_pred EEEeeCCCcEEEEeCCCccchhhhhccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEE
Q 038533 142 IGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLA 220 (337)
Q Consensus 142 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~ 220 (337)
|++|+.||.|++||+.+++.+..+.+|...|.+++|+ ++++|++++.|++|++||...............|...|.+++
T Consensus 445 l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~ 524 (694)
T 3dm0_A 445 ALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVR 524 (694)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEE
T ss_pred EEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEE
Confidence 9999999999999999999889999999999999999 789999999999999999876543333333345778899999
Q ss_pred eecCCC--cEEEEEEecCCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCC
Q 038533 221 WNKQDL--RYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNG 298 (337)
Q Consensus 221 ~~~~~~--~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 298 (337)
|+| ++ ..+++++.|+. |++||+++ .+....+.+|...|++++|+|+++ +|++|+.||.|++||+..++
T Consensus 525 ~~~-~~~~~~l~s~s~d~~-v~vwd~~~-~~~~~~~~~h~~~v~~v~~spdg~-~l~sg~~Dg~i~iwd~~~~~------ 594 (694)
T 3dm0_A 525 FSP-NTLQPTIVSASWDKT-VKVWNLSN-CKLRSTLAGHTGYVSTVAVSPDGS-LCASGGKDGVVLLWDLAEGK------ 594 (694)
T ss_dssp ECS-CSSSCEEEEEETTSC-EEEEETTT-CCEEEEECCCSSCEEEEEECTTSS-EEEEEETTSBCEEEETTTTE------
T ss_pred EeC-CCCcceEEEEeCCCe-EEEEECCC-CcEEEEEcCCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCCCc------
Confidence 999 54 58999999999 99999998 567788999999999999999999 99999999999999998222
Q ss_pred CCceeeeeCCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 299 IDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 299 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
......+...|.+++|+|++. +++++.++.|+||++
T Consensus 595 --~~~~~~~~~~v~~~~~sp~~~-~l~~~~~~~i~iwd~ 630 (694)
T 3dm0_A 595 --KLYSLEANSVIHALCFSPNRY-WLCAATEHGIKIWDL 630 (694)
T ss_dssp --EEECCBCSSCEEEEEECSSSS-EEEEEETTEEEEEET
T ss_pred --eEEEecCCCcEEEEEEcCCCc-EEEEEcCCCEEEEEC
Confidence 233334567899999999985 566667788999985
No 75
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=3.2e-36 Score=253.86 Aligned_cols=243 Identities=18% Similarity=0.295 Sum_probs=206.6
Q ss_pred CCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCc---cceeeecCCCCCcccCCeeEEEeecCCCCe
Q 038533 67 FDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSI---EPVAVLNNSKSSEFCAPLTSFDWNEIEPKR 141 (337)
Q Consensus 67 ~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 141 (337)
.+|.+.|++|+|+|++. .+|++|+ | +|+|||+.+.+. .+...+.+|. ..|.+++|+| ++++
T Consensus 35 ~GH~~~V~~v~~sp~~~--------~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~-----~~V~~~~~s~-dg~~ 100 (340)
T 4aow_A 35 KGHNGWVTQIATTPQFP--------DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHS-----HFVSDVVISS-DGQF 100 (340)
T ss_dssp CCCSSCEEEEEECTTCT--------TEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCS-----SCEEEEEECT-TSSE
T ss_pred CCccCCEEEEEEeCCCC--------CEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCC-----CCEEEEEECC-CCCE
Confidence 79999999999999853 3999887 6 999999987642 3566788888 9999999999 9999
Q ss_pred EEEeeCCCcEEEEeCCCccchhhhhccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEE
Q 038533 142 IGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLA 220 (337)
Q Consensus 142 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~ 220 (337)
|++++.|+.|++|+............+...+..+.++ .++.|++++.|+.+++||+....... .....|...+..++
T Consensus 101 l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~--~~~~~~~~~v~~~~ 178 (340)
T 4aow_A 101 ALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYT--VQDESHSEWVSCVR 178 (340)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEE--ECSSSCSSCEEEEE
T ss_pred EEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEE--EEeccccCcccceE
Confidence 9999999999999999888777777788888899998 78999999999999999998765332 33335778999999
Q ss_pred eecCC-CcEEEEEEecCCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCC
Q 038533 221 WNKQD-LRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGI 299 (337)
Q Consensus 221 ~~~~~-~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 299 (337)
|++.. ..++++++.|+. |++||+++ .+++..+.+|...|++++|+|+++ +|++|+.||.|++||++ + .
T Consensus 179 ~~~~~~~~~~~s~~~d~~-i~i~d~~~-~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~Dg~i~iwd~~--~------~ 247 (340)
T 4aow_A 179 FSPNSSNPIIVSCGWDKL-VKVWNLAN-CKLKTNHIGHTGYLNTVTVSPDGS-LCASGGKDGQAMLWDLN--E------G 247 (340)
T ss_dssp ECSCSSSCEEEEEETTSC-EEEEETTT-TEEEEEECCCSSCEEEEEECTTSS-EEEEEETTCEEEEEETT--T------T
T ss_pred EccCCCCcEEEEEcCCCE-EEEEECCC-CceeeEecCCCCcEEEEEECCCCC-EEEEEeCCCeEEEEEec--c------C
Confidence 98732 346788888998 99999998 667888899999999999999999 99999999999999999 3 1
Q ss_pred CceeeeeCCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 300 DPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 300 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
.+.....+...|..++|+|++ .+++++.|+.|++|++
T Consensus 248 ~~~~~~~~~~~v~~~~~~~~~-~~~~~~~d~~i~iwd~ 284 (340)
T 4aow_A 248 KHLYTLDGGDIINALCFSPNR-YWLCAATGPSIKIWDL 284 (340)
T ss_dssp EEEEEEECSSCEEEEEECSSS-SEEEEEETTEEEEEET
T ss_pred ceeeeecCCceEEeeecCCCC-ceeeccCCCEEEEEEC
Confidence 244455567789999999987 5888889999999985
No 76
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.3e-38 Score=268.70 Aligned_cols=244 Identities=17% Similarity=0.253 Sum_probs=192.1
Q ss_pred CCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEe
Q 038533 68 DHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTC 145 (337)
Q Consensus 68 ~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 145 (337)
.+.++|++++|+|++. +|++++ | .|++||+.++..+....+.+|. ..|.+++|+| ++++|+++
T Consensus 9 ~~~~~v~~~~~s~~g~---------~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~-----~~v~~~~~s~-~~~~l~s~ 73 (377)
T 3dwl_C 9 ILPKPSYEHAFNSQRT---------EFVTTTATNQVELYEQDGNGWKHARTFSDHD-----KIVTCVDWAP-KSNRIVTC 73 (377)
T ss_dssp ECSSCCSCCEECSSSS---------EEECCCSSSCBCEEEEETTEEEECCCBCCCS-----SCEEEEEECT-TTCCEEEE
T ss_pred cCCCcEEEEEECCCCC---------EEEEecCCCEEEEEEccCCceEEEEEEecCC-----ceEEEEEEeC-CCCEEEEE
Confidence 3567899999999998 999986 5 9999999987545777888888 9999999999 89999999
Q ss_pred eCCCcEEEEeCCCcc---chhhhhccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCC---ceeeecCCCCCCCceE
Q 038533 146 SIDTTCTIWDIEKGV---VETQLIAHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEH---STIIYESPQPDTPLLR 218 (337)
Q Consensus 146 ~~dg~i~v~d~~~~~---~~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~---~~~~~~~~~~~~~i~~ 218 (337)
+.|+.|++||+++++ ....+..|...|.+++|+ ++++|++++.|+.|++||++..+. ...+.. .|...+.+
T Consensus 74 s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~--~h~~~v~~ 151 (377)
T 3dwl_C 74 SQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKR--PLRSTILS 151 (377)
T ss_dssp ETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECS--SCCSCEEE
T ss_pred eCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeec--ccCCCeEE
Confidence 999999999999877 556677899999999999 789999999999999999998763 223222 27789999
Q ss_pred EEeecCCCcEEEEEEecCCEEEEEECCCC-----------------CCCeEEeecccceeeEEEeCCCCCCeEEEEcCCC
Q 038533 219 LAWNKQDLRYMATILMDSNKVVILDIRSP-----------------TLPVAELERHRACVNAIAWAPQSRRHICSVGDDS 281 (337)
Q Consensus 219 ~~~~~~~~~~l~~~~~d~~~i~i~d~~~~-----------------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 281 (337)
++|+| ++++|++++.|+. |++||++.. ..++..+ .|...|.+++|+|+++ +|++++.||
T Consensus 152 ~~~~~-~~~~l~~~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~-~l~~~~~d~ 227 (377)
T 3dwl_C 152 LDWHP-NNVLLAAGCADRK-AYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGN-ALAYAGHDS 227 (377)
T ss_dssp EEECT-TSSEEEEEESSSC-EEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSS-CEEEEETTT
T ss_pred EEEcC-CCCEEEEEeCCCE-EEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCC-EEEEEeCCC
Confidence 99999 9999999999999 999998631 2234445 7899999999999999 999999999
Q ss_pred cEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEcCCcEEEEe
Q 038533 282 QAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLK 336 (337)
Q Consensus 282 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~ 336 (337)
.|++||+..+. .+ ......+..|...|.+++|+|++++|++++.|+ +.+|+
T Consensus 228 ~i~iwd~~~~~--~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~-~~~~~ 278 (377)
T 3dwl_C 228 SVTIAYPSAPE--QP-PRALITVKLSQLPLRSLLWANESAIVAAGYNYS-PILLQ 278 (377)
T ss_dssp EEC-CEECSTT--SC-EEECCCEECSSSCEEEEEEEETTEEEEEESSSS-EEEEC
T ss_pred cEEEEECCCCC--Cc-ceeeEeecCCCCceEEEEEcCCCCEEEEEcCCc-EEEEE
Confidence 99999999332 10 000346678999999999999997666665444 44665
No 77
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.6e-36 Score=281.88 Aligned_cols=302 Identities=11% Similarity=0.125 Sum_probs=217.8
Q ss_pred cceeeeeCCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecC-------CCcCCCCCCCCeEEEecCCCC
Q 038533 13 ENSVTHESPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTH-------PSLSFDHPYPPTKLMFDPNSS 83 (337)
Q Consensus 13 ~~~~~~~~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~-------~~~~~~~~~~i~~i~~~~~~~ 83 (337)
+.+..+.+...|++++|+ +++|++|+. ||.|++|+++......... .. ..+|.++|.+++|+|++.
T Consensus 90 ~~~~~~~~~~~V~~v~~sp~g~~l~sgs~----dg~V~lwd~~~~~~~~~~i~~~~~~~~~-~~~h~~~V~sl~~sp~~~ 164 (902)
T 2oaj_A 90 KVLTTVFVPGKITSIDTDASLDWMLIGLQ----NGSMIVYDIDRDQLSSFKLDNLQKSSFF-PAARLSPIVSIQWNPRDI 164 (902)
T ss_dssp SEEEEEECSSCEEEEECCTTCSEEEEEET----TSCEEEEETTTTEEEEEEECCHHHHHTC-SSSCCCCCCEEEEETTEE
T ss_pred cEEEEEcCCCCEEEEEECCCCCEEEEEcC----CCcEEEEECCCCccccceeccccccccc-cccCCCCeEEEEEccCCC
Confidence 455666778899999999 999999997 9999999987654311000 11 267999999999999753
Q ss_pred cccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCC-------------CCcccCCeeEEEeecCCCCeEEEeeCC
Q 038533 84 SRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSK-------------SSEFCAPLTSFDWNEIEPKRIGTCSID 148 (337)
Q Consensus 84 ~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~-------------~~~~~~~i~~~~~~~~~~~~l~~~~~d 148 (337)
.++++|+ + .| +||+.++ +....+..|. ...+...|.+++|+| ++++|++|+.|
T Consensus 165 --------~~l~~g~~dg~v-lWd~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fsp-dg~~lasgs~D 232 (902)
T 2oaj_A 165 --------GTVLISYEYVTL-TYSLVEN--EIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHP-NSLHIITIHED 232 (902)
T ss_dssp --------EEEEEECSSCEE-EEETTTT--EEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECT-TSSEEEEEETT
T ss_pred --------CEEEEEeCCCcE-EEECCCC--ceEEEEecccCCcCCCcccccccccccCCCeEEEEEcC-CCCEEEEEECC
Confidence 3777777 4 88 9999988 5666666551 012236799999999 99999999999
Q ss_pred CcEEEEeCCCccchhh--h---hc-------------cCCceeEEEe---------------------------------
Q 038533 149 TTCTIWDIEKGVVETQ--L---IA-------------HDKEVYDICW--------------------------------- 177 (337)
Q Consensus 149 g~i~v~d~~~~~~~~~--~---~~-------------~~~~v~~~~~--------------------------------- 177 (337)
|.|++||+++++++.. + .. |...|++++|
T Consensus 233 g~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~ 312 (902)
T 2oaj_A 233 NSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGY 312 (902)
T ss_dssp CCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEE
T ss_pred CeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCC
Confidence 9999999976654321 1 00 1112222222
Q ss_pred --------------------------------------------------------------------------------
Q 038533 178 -------------------------------------------------------------------------------- 177 (337)
Q Consensus 178 -------------------------------------------------------------------------------- 177 (337)
T Consensus 313 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~ 392 (902)
T 2oaj_A 313 TPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASL 392 (902)
T ss_dssp CCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGG
T ss_pred CCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCccccccc
Confidence
Q ss_pred ---------------------------------------------------C-CCcEEEEEcCCCeEEEEECCCCCCce-
Q 038533 178 ---------------------------------------------------G-EARVFASVSADGSVRIFDLRDKEHST- 204 (337)
Q Consensus 178 ---------------------------------------------------~-~~~~l~~~~~dg~i~iwd~~~~~~~~- 204 (337)
+ ++++|++|+.|++|++||+.++....
T Consensus 393 ~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~ 472 (902)
T 2oaj_A 393 FPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDN 472 (902)
T ss_dssp SCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTT
T ss_pred CCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCC
Confidence 2 23456666666666666666553210
Q ss_pred eeec-------CCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCC-----------------------------
Q 038533 205 IIYE-------SPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPT----------------------------- 248 (337)
Q Consensus 205 ~~~~-------~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~----------------------------- 248 (337)
..+. ...|...|.+++|+| ++++|++|+.|+. |++||+.+..
T Consensus 473 ~~~~~~l~~~~~~~h~~~V~svafsp-dg~~LAsgs~Dgt-V~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (902)
T 2oaj_A 473 ASFEVNLSRTLNKAKELAVDKISFAA-ETLELAVSIETGD-VVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVL 550 (902)
T ss_dssp BCEEEEHHHHTTCSSSCCEEEEEEET-TTTEEEEEETTSC-EEEEEEEECCC---------------CCSCCGGGSSCSE
T ss_pred ceEEeechhhcCCCCCCceeEEEecC-CCCeEEEEecCcE-EEEEEecCccccCccccCCCcccceeeeeccccCCcccc
Confidence 0000 014667899999999 9999999999999 9999997631
Q ss_pred ---------------CCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeee-eCCCcee
Q 038533 249 ---------------LPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMY-SAGSEIN 312 (337)
Q Consensus 249 ---------------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~-~~~~~v~ 312 (337)
+++..+.+|.+.|++++|+|+| +||+|+.|++|++||++.+.... ......+. +|...|+
T Consensus 551 ~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG--~lAsgs~D~tv~lwd~~~~~~~~--~~~~~~~~~gh~~~V~ 626 (902)
T 2oaj_A 551 VDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG--FVGIAYAAGSLMLIDRRGPAIIY--MENIREISGAQSACVT 626 (902)
T ss_dssp EECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS--EEEEEETTSEEEEEETTTTEEEE--EEEGGGTCSSCCCCEE
T ss_pred ccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc--EEEEEeCCCcEEEEECCCCeEEE--EeehhHhccccccceE
Confidence 1356778899999999999999 89999999999999988221000 00001222 7889999
Q ss_pred EEEEc-----cCC---CceEEEEcCCcEEEEeC
Q 038533 313 QLQWS-----PAQ---PDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 313 ~~~~~-----~~~---~~l~~~~~d~~i~iw~l 337 (337)
+++|+ ||| +.|++++.|++|++|++
T Consensus 627 sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 627 CIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp EEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred EEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 99999 886 78999999999999985
No 78
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.9e-35 Score=258.43 Aligned_cols=269 Identities=17% Similarity=0.253 Sum_probs=226.8
Q ss_pred CCCceeEEEEecceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-
Q 038533 20 SPYPLYAMAVCGQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG- 98 (337)
Q Consensus 20 ~~~~v~~~~~s~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~- 98 (337)
|..+|.+++|++++|++|+. ||.|++|++......... ..|...|.++.|+ +. .+++++
T Consensus 158 h~~~v~~~~~~~~~l~s~~~----dg~i~vwd~~~~~~~~~~-----~~h~~~v~~~~~~--~~---------~l~s~s~ 217 (445)
T 2ovr_B 158 HTGGVWSSQMRDNIIISGST----DRTLKVWNAETGECIHTL-----YGHTSTVRCMHLH--EK---------RVVSGSR 217 (445)
T ss_dssp CSSCEEEEEEETTEEEEEET----TSCEEEEETTTTEEEEEE-----CCCSSCEEEEEEE--TT---------EEEEEET
T ss_pred CCCCEEEEEecCCEEEEEeC----CCeEEEEECCcCcEEEEE-----CCCCCcEEEEEec--CC---------EEEEEeC
Confidence 67889999999889999997 999999998765443332 6899999999995 34 666665
Q ss_pred C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCceeEEEe
Q 038533 99 D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICW 177 (337)
Q Consensus 99 ~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~ 177 (337)
| .|++||+.++ +....+.+|. ..|.+++| +++++++|+.||.|++||+++++.+..+.+|...|.+++|
T Consensus 218 dg~i~~wd~~~~--~~~~~~~~~~-----~~v~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 287 (445)
T 2ovr_B 218 DATLRVWDIETG--QCLHVLMGHV-----AAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF 287 (445)
T ss_dssp TSEEEEEESSSC--CEEEEEECCS-----SCEEEEEE---CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE
T ss_pred CCEEEEEECCCC--cEEEEEcCCc-----ccEEEEEE---CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE
Confidence 6 9999999998 6778888888 89999998 5689999999999999999999999999999999999999
Q ss_pred CCCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeec-
Q 038533 178 GEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELER- 256 (337)
Q Consensus 178 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~- 256 (337)
++.++++++.||.|++||+++++....+ ..|...+.++.+ +++++++++.|+. |++||+++ ++++..+..
T Consensus 288 -~~~~l~~~~~d~~i~i~d~~~~~~~~~~---~~~~~~v~~~~~---~~~~l~~~~~dg~-i~vwd~~~-~~~~~~~~~~ 358 (445)
T 2ovr_B 288 -DGIHVVSGSLDTSIRVWDVETGNCIHTL---TGHQSLTSGMEL---KDNILVSGNADST-VKIWDIKT-GQCLQTLQGP 358 (445)
T ss_dssp -CSSEEEEEETTSCEEEEETTTCCEEEEE---CCCCSCEEEEEE---ETTEEEEEETTSC-EEEEETTT-CCEEEEECST
T ss_pred -CCCEEEEEeCCCeEEEEECCCCCEEEEE---cCCcccEEEEEE---eCCEEEEEeCCCe-EEEEECCC-CcEEEEEccC
Confidence 6889999999999999999998754443 246678888887 4579999999999 99999988 566777775
Q ss_pred --ccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceee-----eeCCCceeEEEEccCCCceEEEEcC
Q 038533 257 --HRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSM-----YSAGSEINQLQWSPAQPDWLAIAFS 329 (337)
Q Consensus 257 --~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~d 329 (337)
|...|.+++|++ + +|++|+.||.|++||+..++ ....+ ..|...|.+++|+|++..+++++.|
T Consensus 359 ~~~~~~v~~~~~~~--~-~l~s~~~dg~v~iwd~~~~~-------~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d 428 (445)
T 2ovr_B 359 NKHQSAVTCLQFNK--N-FVITSSDDGTVKLWDLKTGE-------FIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN 428 (445)
T ss_dssp TSCSSCEEEEEECS--S-EEEEEETTSEEEEEETTTCC-------EEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSS
T ss_pred CCCCCCEEEEEECC--C-EEEEEeCCCeEEEEECCCCc-------eeeeeeccccCCCCceEEEEEecCCEEEEEEcccC
Confidence 888999999964 4 99999999999999998332 12223 3678899999999999888889999
Q ss_pred Cc----EEEEeC
Q 038533 330 NK----MQLLKV 337 (337)
Q Consensus 330 ~~----i~iw~l 337 (337)
|. +.||++
T Consensus 429 g~~~~~l~v~df 440 (445)
T 2ovr_B 429 GTEETKLLVLDF 440 (445)
T ss_dssp SSSCCEEEEEEC
T ss_pred CCCccEEEEEEC
Confidence 97 999985
No 79
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=5.1e-36 Score=252.96 Aligned_cols=288 Identities=14% Similarity=0.148 Sum_probs=206.6
Q ss_pred eeCCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecC--CCCcccCcCCccE
Q 038533 18 HESPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDP--NSSSRKSSSNRHL 93 (337)
Q Consensus 18 ~~~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~--~~~~~~~~~~~~~ 93 (337)
..|..+|++++|+ +++||+|+. ||.|+||++............+ .+|...|.+++|+| ++. +
T Consensus 8 ~gH~~~v~~~~~~~~~~~l~~~~~----dg~i~iw~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~d~~---------~ 73 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGRHVATCSS----DQHIKVFKLDKDTSNWELSDSW-RAHDSSIVAIDWASPEYGR---------I 73 (351)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEET----TSEEEEEEECSSSCCEEEEEEE-ECCSSCEEEEEECCGGGCS---------E
T ss_pred cccccceeEEEEcCCCCEEEEeeC----CCeEEEEECCCCCCcceeccee-ccCCCcEEEEEEcCCCCCC---------E
Confidence 4578999999999 889999997 9999999998765433321122 57999999999999 577 8
Q ss_pred EEEeC-C-eEEEEecCCCCc-------cceeeecCCCCCcccCCeeEEEeecCC--CCeEEEeeCCCcEEEEeCCCccch
Q 038533 94 LASSG-D-FLRLWDVGDSSI-------EPVAVLNNSKSSEFCAPLTSFDWNEIE--PKRIGTCSIDTTCTIWDIEKGVVE 162 (337)
Q Consensus 94 l~~~~-~-~v~vw~~~~~~~-------~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~dg~i~v~d~~~~~~~ 162 (337)
|++++ | .|++||+.+++. +....+..|. ..|.+++|+| + ++++++++.||.|++||+++++.+
T Consensus 74 l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~-~~~~~~l~~~~~dg~v~iwd~~~~~~~ 147 (351)
T 3f3f_A 74 IASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSK-----GSLYSVKFAP-AHLGLKLACLGNDGILRLYDALEPSDL 147 (351)
T ss_dssp EEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCS-----SCEEEEEECC-GGGCSEEEEEETTCEEEEEECSSTTCT
T ss_pred EEEEcCCCeEEEEecCCCcccccccCcceeeeecccC-----CceeEEEEcC-CCCCcEEEEecCCCcEEEecCCChHHh
Confidence 88877 5 999999988642 3467777887 9999999999 7 899999999999999999988766
Q ss_pred hhhh-------------ccCCceeEEEeC-C---CcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCC
Q 038533 163 TQLI-------------AHDKEVYDICWG-E---ARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQD 225 (337)
Q Consensus 163 ~~~~-------------~~~~~v~~~~~~-~---~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 225 (337)
..+. .|...+.+++|+ + +..+++++.++.+.+|+....+. ........|...|.+++|+| +
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~h~~~i~~~~~~p-~ 225 (351)
T 3f3f_A 148 RSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKL-HVAAKLPGHKSLIRSISWAP-S 225 (351)
T ss_dssp TCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCE-EEEEECCCCCSCEEEEEECC-C
T ss_pred ccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCce-eeeeecCCCCcceeEEEECC-C
Confidence 5543 577889999999 4 88999999999998887776653 33344446889999999999 7
Q ss_pred C----cEEEEEEecCCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCC----CcEEEEeCCCCCCCCCC
Q 038533 226 L----RYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDD----SQAFIWELPLPPVAGPN 297 (337)
Q Consensus 226 ~----~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----g~i~iw~~~~~~~~~~~ 297 (337)
+ .+|++++.|+. |++||++.... ......+..........+... .++.+..+ ..+.+|+.. .
T Consensus 226 ~~~~~~~l~s~~~dg~-i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~----- 295 (351)
T 3f3f_A 226 IGRWYQLIATGCKDGR-IRIFKITEKLS-PLASEESLTNSNMFDNSADVD-MDAQGRSDSNTEEKAELQSNL--Q----- 295 (351)
T ss_dssp SSCSSEEEEEEETTSC-EEEEEEEECC-----------------------------------------CCSE--E-----
T ss_pred CCCcceEEEEEcCCCe-EEEEeCCCCcC-ccccCCcccceeccCCCcccc-cccccccccccceeeeecccc--c-----
Confidence 6 89999999999 99999987433 223333333444444455444 44444333 233344333 1
Q ss_pred CCCceeeeeCCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 298 GIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 298 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
......+.+|...|++++|+|++++|++++.||.|+||++
T Consensus 296 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~ 335 (351)
T 3f3f_A 296 VELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKA 335 (351)
T ss_dssp EEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEE
T ss_pred ccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEec
Confidence 1123356679999999999999999999999999999985
No 80
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=6.5e-36 Score=271.50 Aligned_cols=278 Identities=15% Similarity=0.217 Sum_probs=215.3
Q ss_pred CCCceeEEEEe--cc-eEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCC---CCeEEEecCC-CCcccCcCCcc
Q 038533 20 SPYPLYAMAVC--GQ-RIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPY---PPTKLMFDPN-SSSRKSSSNRH 92 (337)
Q Consensus 20 ~~~~v~~~~~s--~~-~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~---~i~~i~~~~~-~~~~~~~~~~~ 92 (337)
|...|.+++|+ ++ +|++|+. |+.|++|++......... ..|.. .|.+++|+|+ +.
T Consensus 159 ~~~~v~~~~~~~~~~~~l~~~~~----d~~v~vwd~~~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~--------- 220 (615)
T 1pgu_A 159 HSQRINACHLKQSRPMRSMTVGD----DGSVVFYQGPPFKFSASD-----RTHHKQGSFVRDVEFSPDSGE--------- 220 (615)
T ss_dssp CSSCEEEEEECSSSSCEEEEEET----TTEEEEEETTTBEEEEEE-----CSSSCTTCCEEEEEECSTTCC---------
T ss_pred CCccEEEEEECCCCCcEEEEEeC----CCcEEEEeCCCcceeeee-----cccCCCCceEEEEEECCCCCC---------
Confidence 57889999999 54 7999986 999999997654433332 56888 9999999999 88
Q ss_pred EEEEeC-C-eEEEEecCCCCccceeee-c---CCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhh
Q 038533 93 LLASSG-D-FLRLWDVGDSSIEPVAVL-N---NSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLI 166 (337)
Q Consensus 93 ~l~~~~-~-~v~vw~~~~~~~~~~~~~-~---~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~ 166 (337)
+|++++ + .|++||+.++ +....+ . .|. ..|.+++|+ ++++|++++.||.|++||+++++.+..+.
T Consensus 221 ~l~~~~~dg~i~vwd~~~~--~~~~~~~~~~~~~~-----~~v~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~ 291 (615)
T 1pgu_A 221 FVITVGSDRKISCFDGKSG--EFLKYIEDDQEPVQ-----GGIFALSWL--DSQKFATVGADATIRVWDVTTSKCVQKWT 291 (615)
T ss_dssp EEEEEETTCCEEEEETTTC--CEEEECCBTTBCCC-----SCEEEEEES--SSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EEEEEeCCCeEEEEECCCC--CEeEEecccccccC-----CceEEEEEc--CCCEEEEEcCCCcEEEEECCCCcEEEEEc
Confidence 888776 5 9999999988 566666 5 677 899999998 78999999999999999999877555443
Q ss_pred cc---------------------------------------------CC-------------------------------
Q 038533 167 AH---------------------------------------------DK------------------------------- 170 (337)
Q Consensus 167 ~~---------------------------------------------~~------------------------------- 170 (337)
.+ ..
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~ 371 (615)
T 1pgu_A 292 LDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDH 371 (615)
T ss_dssp CCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCC
T ss_pred CCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcc
Confidence 32 11
Q ss_pred --ceeEEEeCCCcEEEEEcCCCeEEEEECC--------------------------------------------------
Q 038533 171 --EVYDICWGEARVFASVSADGSVRIFDLR-------------------------------------------------- 198 (337)
Q Consensus 171 --~v~~~~~~~~~~l~~~~~dg~i~iwd~~-------------------------------------------------- 198 (337)
.|.+++|.++..+++++.|+.+++||++
T Consensus 372 ~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (615)
T 1pgu_A 372 SNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSA 451 (615)
T ss_dssp CSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEE
T ss_pred cCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceE
Confidence 2223333223444444444444444432
Q ss_pred ------------------------CCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEe
Q 038533 199 ------------------------DKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAEL 254 (337)
Q Consensus 199 ------------------------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~ 254 (337)
..+... .....|...+.+++|+| ++++|++++.|+. |++||+.+ .+++..+
T Consensus 452 ~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~--~~~~~~~~~v~~~~~s~-~g~~l~~~~~dg~-i~iw~~~~-~~~~~~~ 526 (615)
T 1pgu_A 452 VSLSQNYVAVGLEEGNTIQVFKLSDLEVSF--DLKTPLRAKPSYISISP-SETYIAAGDVMGK-ILLYDLQS-REVKTSR 526 (615)
T ss_dssp EEECSSEEEEEETTTSCEEEEETTEEEEEE--ECSSCCSSCEEEEEECT-TSSEEEEEETTSC-EEEEETTT-TEEEECC
T ss_pred EEEcCCEEEEeecCCCeEEEEECCCccccc--cccCCccCceEEEEECC-CCCEEEEcCCCCe-EEEeeCCC-CcceeEe
Confidence 211100 22335778999999999 9999999999999 99999988 5567777
Q ss_pred ec-ccceeeEEEeCC----------CCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCce
Q 038533 255 ER-HRACVNAIAWAP----------QSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDW 323 (337)
Q Consensus 255 ~~-~~~~v~~~~~~~----------~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 323 (337)
.+ |...|++++|+| +++ +|++++.||.|++||+. +.. .....+.+|...|.+++|+|+++ |
T Consensus 527 ~~~h~~~v~~~~~sp~~~~~~~~~~~~~-~l~~~~~dg~i~iw~~~--~~~----~~~~~~~~h~~~v~~l~~s~~~~-l 598 (615)
T 1pgu_A 527 WAFRTSKINAISWKPAEKGANEEEIEED-LVATGSLDTNIFIYSVK--RPM----KIIKALNAHKDGVNNLLWETPST-L 598 (615)
T ss_dssp SCCCSSCEEEEEECCCC------CCSCC-EEEEEETTSCEEEEESS--CTT----CCEEETTSSTTCEEEEEEEETTE-E
T ss_pred ecCCCCceeEEEEcCccccccccccCCC-EEEEEcCCCcEEEEECC--CCc----eechhhhcCccceEEEEEcCCCC-e
Confidence 77 999999999999 898 99999999999999998 321 12345678999999999999999 9
Q ss_pred EEEEcCCcEEEEeC
Q 038533 324 LAIAFSNKMQLLKV 337 (337)
Q Consensus 324 ~~~~~d~~i~iw~l 337 (337)
++++.||.|++|++
T Consensus 599 ~s~~~d~~v~iw~~ 612 (615)
T 1pgu_A 599 VSSGADACIKRWNV 612 (615)
T ss_dssp EEEETTSCEEEEEE
T ss_pred EEecCCceEEEEee
Confidence 99999999999985
No 81
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=4.5e-35 Score=256.06 Aligned_cols=268 Identities=19% Similarity=0.258 Sum_probs=225.7
Q ss_pred eCCC-ceeEEEEecceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEe
Q 038533 19 ESPY-PLYAMAVCGQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASS 97 (337)
Q Consensus 19 ~~~~-~v~~~~~s~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~ 97 (337)
.|.+ .+.++++++++|++|+. ||.|++|++......... .+|...|.+++|+ +. +++++
T Consensus 116 ~h~~~v~~~~~~~g~~l~sg~~----dg~i~vwd~~~~~~~~~~-----~~h~~~v~~~~~~--~~---------~l~s~ 175 (445)
T 2ovr_B 116 GHDDHVITCLQFCGNRIVSGSD----DNTLKVWSAVTGKCLRTL-----VGHTGGVWSSQMR--DN---------IIISG 175 (445)
T ss_dssp CSTTSCEEEEEEETTEEEEEET----TSCEEEEETTTCCEEEEC-----CCCSSCEEEEEEE--TT---------EEEEE
T ss_pred ccCCCcEEEEEEcCCEEEEEEC----CCcEEEEECCCCcEEEEE-----cCCCCCEEEEEec--CC---------EEEEE
Confidence 3544 46788888999999997 999999998765544332 6899999999997 44 67766
Q ss_pred C-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCceeEE
Q 038533 98 G-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDI 175 (337)
Q Consensus 98 ~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~ 175 (337)
+ | .|++||+.++ +....+.+|. ..|.+++|++ +.+++|+.||.|++||+++++.+..+.+|...|.++
T Consensus 176 ~~dg~i~vwd~~~~--~~~~~~~~h~-----~~v~~~~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~ 245 (445)
T 2ovr_B 176 STDRTLKVWNAETG--ECIHTLYGHT-----STVRCMHLHE---KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV 245 (445)
T ss_dssp ETTSCEEEEETTTT--EEEEEECCCS-----SCEEEEEEET---TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEE
T ss_pred eCCCeEEEEECCcC--cEEEEECCCC-----CcEEEEEecC---CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEE
Confidence 6 6 9999999998 6788888888 9999999964 789999999999999999999998999999999999
Q ss_pred EeCCCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEee
Q 038533 176 CWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELE 255 (337)
Q Consensus 176 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~ 255 (337)
++ +++.+++++.||.|++||+++++....+ ..|...+.++.| ++.++++++.|+. |++||+++ .+++..+.
T Consensus 246 ~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~~v~~~~~---~~~~l~~~~~d~~-i~i~d~~~-~~~~~~~~ 316 (445)
T 2ovr_B 246 QY-DGRRVVSGAYDFMVKVWDPETETCLHTL---QGHTNRVYSLQF---DGIHVVSGSLDTS-IRVWDVET-GNCIHTLT 316 (445)
T ss_dssp EE-CSSCEEEEETTSCEEEEEGGGTEEEEEE---CCCSSCEEEEEE---CSSEEEEEETTSC-EEEEETTT-CCEEEEEC
T ss_pred EE-CCCEEEEEcCCCEEEEEECCCCcEeEEe---cCCCCceEEEEE---CCCEEEEEeCCCe-EEEEECCC-CCEEEEEc
Confidence 99 6789999999999999999987644433 246789999999 6789999999999 99999998 66788899
Q ss_pred cccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeee---CCCceeEEEEccCCCceEEEEcCCcE
Q 038533 256 RHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYS---AGSEINQLQWSPAQPDWLAIAFSNKM 332 (337)
Q Consensus 256 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~i 332 (337)
+|...+.++.++ +. +|++|+.||.|++||++.++ ....+.. |...|.+++|++ +.+++++.||.|
T Consensus 317 ~~~~~v~~~~~~--~~-~l~~~~~dg~i~vwd~~~~~-------~~~~~~~~~~~~~~v~~~~~~~--~~l~s~~~dg~v 384 (445)
T 2ovr_B 317 GHQSLTSGMELK--DN-ILVSGNADSTVKIWDIKTGQ-------CLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTV 384 (445)
T ss_dssp CCCSCEEEEEEE--TT-EEEEEETTSCEEEEETTTCC-------EEEEECSTTSCSSCEEEEEECS--SEEEEEETTSEE
T ss_pred CCcccEEEEEEe--CC-EEEEEeCCCeEEEEECCCCc-------EEEEEccCCCCCCCEEEEEECC--CEEEEEeCCCeE
Confidence 999999988875 45 99999999999999998222 2234443 888999999964 589999999999
Q ss_pred EEEeC
Q 038533 333 QLLKV 337 (337)
Q Consensus 333 ~iw~l 337 (337)
++|++
T Consensus 385 ~iwd~ 389 (445)
T 2ovr_B 385 KLWDL 389 (445)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 99985
No 82
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-37 Score=271.36 Aligned_cols=253 Identities=14% Similarity=0.129 Sum_probs=193.3
Q ss_pred CCCCCCCeEEEecCCCCcccCcCCccEEE-------------------EeC-C-eEEEEecCCCCccc--eeeecCCCCC
Q 038533 67 FDHPYPPTKLMFDPNSSSRKSSSNRHLLA-------------------SSG-D-FLRLWDVGDSSIEP--VAVLNNSKSS 123 (337)
Q Consensus 67 ~~~~~~i~~i~~~~~~~~~~~~~~~~~l~-------------------~~~-~-~v~vw~~~~~~~~~--~~~~~~~~~~ 123 (337)
..+.+.|.+|+|+|++.........++|| +++ | +|+||++.+++... ...+.+|.
T Consensus 130 ~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~-- 207 (524)
T 2j04_B 130 YNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSF-- 207 (524)
T ss_dssp EECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECC--
T ss_pred EECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecC--
Confidence 34678899999999861000000001444 344 4 89999998874322 23456666
Q ss_pred cccCCeeEEEeecC-----CCCeEEEeeCCCcEEEEeCCCccc-----------hhhhhccCCceeEEEeCCCcEEEEEc
Q 038533 124 EFCAPLTSFDWNEI-----EPKRIGTCSIDTTCTIWDIEKGVV-----------ETQLIAHDKEVYDICWGEARVFASVS 187 (337)
Q Consensus 124 ~~~~~i~~~~~~~~-----~~~~l~~~~~dg~i~v~d~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~l~~~~ 187 (337)
+.|.+++|+|. ++.+||+++.||+|++||+.+++. ...+.+|...|++++|+++..|++|+
T Consensus 208 ---~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs 284 (524)
T 2j04_B 208 ---GEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGF 284 (524)
T ss_dssp ---CSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEE
T ss_pred ---CcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEe
Confidence 88999999983 257999999999999999987642 23566889999999999667899999
Q ss_pred CCCeEEEEECCCCCCceeeecCCCCCCCceEE--EeecCCC-cEEEEEEecCCEEEEEECCCCCCCeEEeecccc--eee
Q 038533 188 ADGSVRIFDLRDKEHSTIIYESPQPDTPLLRL--AWNKQDL-RYMATILMDSNKVVILDIRSPTLPVAELERHRA--CVN 262 (337)
Q Consensus 188 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~-~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~--~v~ 262 (337)
.||+|++||++++........ .|...|.++ .|+| ++ .+|++++.|+. |++||+++ .+++..+.+|.. .|.
T Consensus 285 ~DgtV~lWD~~~~~~~~~~~~--~H~~~V~sv~~~~s~-~g~~~laS~S~D~t-vklWD~~~-~~~~~~~~~~~~~~~v~ 359 (524)
T 2j04_B 285 KNGFVAEFDLTDPEVPSFYDQ--VHDSYILSVSTAYSD-FEDTVVSTVAVDGY-FYIFNPKD-IATTKTTVSRFRGSNLV 359 (524)
T ss_dssp TTSEEEEEETTBCSSCSEEEE--CSSSCEEEEEEECCT-TSCCEEEEEETTSE-EEEECGGG-HHHHCEEEEECSCCSCC
T ss_pred CCCEEEEEECCCCCCceEEee--cccccEEEEEEEcCC-CCCeEEEEeccCCe-EEEEECCC-CCcccccccccccCccc
Confidence 999999999997754333333 478899999 5666 76 89999999998 99999997 444556666653 488
Q ss_pred EEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 263 AIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 263 ~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
+++|+|+++ .+++++.|+.|++||++ .. .....+.+|...|++++|+|+++.|++++.|++|++|++
T Consensus 360 ~v~fsp~~~-~l~s~~~d~tv~lwd~~--~~-----~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~ 426 (524)
T 2j04_B 360 PVVYCPQIY-SYIYSDGASSLRAVPSR--AA-----FAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNA 426 (524)
T ss_dssp CEEEETTTT-EEEEECSSSEEEEEETT--CT-----TCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBS
T ss_pred ceEeCCCcC-eEEEeCCCCcEEEEECc--cc-----ccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEec
Confidence 999999998 89999999999999998 31 224567789999999999999999999999999999984
No 83
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=7e-36 Score=254.86 Aligned_cols=245 Identities=13% Similarity=0.176 Sum_probs=207.9
Q ss_pred CCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEE
Q 038533 67 FDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGT 144 (337)
Q Consensus 67 ~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 144 (337)
..|.++|.+++|+|++. +|++++ + .|++||+.+++.+....+.+|. ..|.+++|+| ++++|++
T Consensus 5 ~~~~~~i~~~~~s~~~~---------~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~-----~~v~~~~~~~-~~~~l~~ 69 (372)
T 1k8k_C 5 SFLVEPISCHAWNKDRT---------QIAICPNNHEVHIYEKSGNKWVQVHELKEHN-----GQVTGVDWAP-DSNRIVT 69 (372)
T ss_dssp ESCSSCCCEEEECTTSS---------EEEEECSSSEEEEEEEETTEEEEEEEEECCS-----SCEEEEEEET-TTTEEEE
T ss_pred cccCCCeEEEEECCCCC---------EEEEEeCCCEEEEEeCCCCcEEeeeeecCCC-----CcccEEEEeC-CCCEEEE
Confidence 35889999999999998 898886 5 9999999998544888888888 9999999999 9999999
Q ss_pred eeCCCcEEEEeCCCccchh--hhhccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceee-ecCCCCCCCceEEE
Q 038533 145 CSIDTTCTIWDIEKGVVET--QLIAHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTII-YESPQPDTPLLRLA 220 (337)
Q Consensus 145 ~~~dg~i~v~d~~~~~~~~--~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~i~~~~ 220 (337)
++.||.|++||+++++... .+..|...|.+++|+ ++++|++++.|+.|++||++........ .....|...+.+++
T Consensus 70 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~ 149 (372)
T 1k8k_C 70 CGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLD 149 (372)
T ss_dssp EETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEE
T ss_pred EcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEE
Confidence 9999999999998876433 345788999999999 7899999999999999999987642221 12234678999999
Q ss_pred eecCCCcEEEEEEecCCEEEEEECCC-----------------CCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcE
Q 038533 221 WNKQDLRYMATILMDSNKVVILDIRS-----------------PTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQA 283 (337)
Q Consensus 221 ~~~~~~~~l~~~~~d~~~i~i~d~~~-----------------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 283 (337)
|+| ++.+|++++.|+. |++||++. ...++..+..|...|.+++|+|+++ +|++++.||.|
T Consensus 150 ~~~-~~~~l~~~~~dg~-i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i 226 (372)
T 1k8k_C 150 WHP-NSVLLAAGSCDFK-CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGS-RVAWVSHDSTV 226 (372)
T ss_dssp ECT-TSSEEEEEETTSC-EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSS-EEEEEETTTEE
T ss_pred EcC-CCCEEEEEcCCCC-EEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCC-EEEEEeCCCEE
Confidence 999 9999999999999 99999641 2456777888999999999999998 99999999999
Q ss_pred EEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 284 FIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 284 ~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
++||++ + +.....+..|..+|.+++|+|++.+++ ++.|+.|++|++
T Consensus 227 ~i~d~~--~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~d~~i~i~~~ 272 (372)
T 1k8k_C 227 CLADAD--K-----KMAVATLASETLPLLAVTFITESSLVA-AGHDCFPVLFTY 272 (372)
T ss_dssp EEEEGG--G-----TTEEEEEECSSCCEEEEEEEETTEEEE-EETTSSCEEEEE
T ss_pred EEEECC--C-----CceeEEEccCCCCeEEEEEecCCCEEE-EEeCCeEEEEEc
Confidence 999998 3 122446678888999999999997554 559999999984
No 84
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.4e-35 Score=269.28 Aligned_cols=276 Identities=14% Similarity=0.203 Sum_probs=230.9
Q ss_pred eCCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCC----CcceecCCCcCCCCCCC-CeEEEecC--CCCcccCcC
Q 038533 19 ESPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPE----SLSIKTHPSLSFDHPYP-PTKLMFDP--NSSSRKSSS 89 (337)
Q Consensus 19 ~~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~----~~~~~~~~~~~~~~~~~-i~~i~~~~--~~~~~~~~~ 89 (337)
.+.+.|.+++|+ +++||+++ ++.|+||+++.. ..... ..+|... |.+++|+| ++.
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~-----~~~v~v~~~~~~~~~~~~~~~-----~~~h~~~~v~~~~~sp~~~~~------ 79 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPC-----GKSAFVRCLDDGDSKVPPVVQ-----FTGHGSSVVTTVKFSPIKGSQ------ 79 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEE-----TTEEEEEECCSSCCSSCSEEE-----ECTTTTSCEEEEEECSSTTCC------
T ss_pred CccCceeEEEECCCCCEEEEec-----CCeEEEEECCCCCCccccceE-----EecCCCceEEEEEECcCCCCC------
Confidence 457889999999 88999998 899999999855 32222 2689999 99999999 998
Q ss_pred CccEEEEeC-C-eEEEEecCCC------CccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCC----CcEEEEeCC
Q 038533 90 NRHLLASSG-D-FLRLWDVGDS------SIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSID----TTCTIWDIE 157 (337)
Q Consensus 90 ~~~~l~~~~-~-~v~vw~~~~~------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d----g~i~v~d~~ 157 (337)
+|++++ | .|++||+.++ +......+..|. .+|.+++|+| +++++++++.+ +.|++||
T Consensus 80 ---~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~s~-~~~~l~~~~~~~~~~~~v~~~d-- 148 (615)
T 1pgu_A 80 ---YLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLA-----GPISDISWDF-EGRRLCVVGEGRDNFGVFISWD-- 148 (615)
T ss_dssp ---EEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCS-----SCEEEEEECT-TSSEEEEEECCSSCSEEEEETT--
T ss_pred ---EEEEecCCCEEEEEeCCCCcccccccccccchhhccc-----ccEEEEEEeC-CCCEEEEeccCCCCccEEEEEE--
Confidence 888887 5 9999999755 346777888887 8999999999 99999999987 6899998
Q ss_pred CccchhhhhccCCceeEEEeC-CCc-EEEEEcCCCeEEEEECCCCCCceeeecCCCCCC---CceEEEeecCC-CcEEEE
Q 038533 158 KGVVETQLIAHDKEVYDICWG-EAR-VFASVSADGSVRIFDLRDKEHSTIIYESPQPDT---PLLRLAWNKQD-LRYMAT 231 (337)
Q Consensus 158 ~~~~~~~~~~~~~~v~~~~~~-~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~---~i~~~~~~~~~-~~~l~~ 231 (337)
.++.+..+.+|...|.+++|+ ++. .+++++.|+.|++||+++.+....+. .|.. .+.+++|+| + +++|++
T Consensus 149 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~---~~~~~~~~v~~~~~~~-~~~~~l~~ 224 (615)
T 1pgu_A 149 SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDR---THHKQGSFVRDVEFSP-DSGEFVIT 224 (615)
T ss_dssp TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEEC---SSSCTTCCEEEEEECS-TTCCEEEE
T ss_pred CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeec---ccCCCCceEEEEEECC-CCCCEEEE
Confidence 566778888999999999999 555 89999999999999998876444432 3556 899999999 7 999999
Q ss_pred EEecCCEEEEEECCCCCCCeEEe-e---cccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeC
Q 038533 232 ILMDSNKVVILDIRSPTLPVAEL-E---RHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSA 307 (337)
Q Consensus 232 ~~~d~~~i~i~d~~~~~~~~~~~-~---~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~ 307 (337)
++.|+. |++||+++ .+++..+ . .|...|.+++|+ ++. +|++++.||.|++||++.++ ....+..+
T Consensus 225 ~~~dg~-i~vwd~~~-~~~~~~~~~~~~~~~~~v~~~~~~-~~~-~l~~~~~d~~i~~wd~~~~~-------~~~~~~~~ 293 (615)
T 1pgu_A 225 VGSDRK-ISCFDGKS-GEFLKYIEDDQEPVQGGIFALSWL-DSQ-KFATVGADATIRVWDVTTSK-------CVQKWTLD 293 (615)
T ss_dssp EETTCC-EEEEETTT-CCEEEECCBTTBCCCSCEEEEEES-SSS-EEEEEETTSEEEEEETTTTE-------EEEEEECC
T ss_pred EeCCCe-EEEEECCC-CCEeEEecccccccCCceEEEEEc-CCC-EEEEEcCCCcEEEEECCCCc-------EEEEEcCC
Confidence 999999 99999988 5667777 5 899999999999 888 99999999999999998221 12233333
Q ss_pred ----CCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 308 ----GSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 308 ----~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
...+.++.|. ++..+++++.|+.|++|++
T Consensus 294 ~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~ 326 (615)
T 1pgu_A 294 KQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYEL 326 (615)
T ss_dssp TTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEET
T ss_pred CCcccCceeEEEeC-CCCeEEEEECCCCEEEEEC
Confidence 3678888886 7778999999999999985
No 85
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-36 Score=256.96 Aligned_cols=247 Identities=17% Similarity=0.281 Sum_probs=206.3
Q ss_pred eeCCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCC--CCcccCcCCccE
Q 038533 18 HESPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPN--SSSRKSSSNRHL 93 (337)
Q Consensus 18 ~~~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~--~~~~~~~~~~~~ 93 (337)
-.|..+|++++|+ +++||+|+. ||.|+||+++........ .+ ..|...|.+++|+++ +. +
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~----dg~i~iw~~~~~~~~~~~--~~-~~h~~~v~~~~~~~~~~~~---------~ 71 (379)
T 3jrp_A 8 NAHNELIHDAVLDYYGKRLATCSS----DKTIKIFEVEGETHKLID--TL-TGHEGPVWRVDWAHPKFGT---------I 71 (379)
T ss_dssp EECCCCEEEEEECSSSSEEEEEET----TSCEEEEEEETTEEEEEE--EE-CCCSSCEEEEEECCGGGCS---------E
T ss_pred cCCcccEEEEEEcCCCCEEEEEEC----CCcEEEEecCCCcceeee--Ee-cCCCCcEEEEEeCCCCCCC---------E
Confidence 3578999999999 899999996 999999999855444332 22 689999999999977 76 8
Q ss_pred EEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCC--CCeEEEeeCCCcEEEEeCCCccc--hhhhhc
Q 038533 94 LASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIE--PKRIGTCSIDTTCTIWDIEKGVV--ETQLIA 167 (337)
Q Consensus 94 l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~dg~i~v~d~~~~~~--~~~~~~ 167 (337)
|++++ | .|++||+.+++......+..|. ..|.+++|+| + +.++++++.||.|++||++++.. ...+..
T Consensus 72 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-----~~v~~~~~~~-~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~ 145 (379)
T 3jrp_A 72 LASCSYDGKVLIWKEENGRWSQIAVHAVHS-----ASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA 145 (379)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCS-----SCEEEEEECC-GGGCSEEEEEETTSEEEEEECCTTSCCCEEEEEC
T ss_pred EEEeccCCEEEEEEcCCCceeEeeeecCCC-----cceEEEEeCC-CCCCCEEEEecCCCcEEEEecCCCCceeeEEecC
Confidence 88877 5 9999999998555777888887 8999999999 7 89999999999999999988743 334567
Q ss_pred cCCceeEEEeCC--------------CcEEEEEcCCCeEEEEECCCCCCce-eeecCCCCCCCceEEEeecCC---CcEE
Q 038533 168 HDKEVYDICWGE--------------ARVFASVSADGSVRIFDLRDKEHST-IIYESPQPDTPLLRLAWNKQD---LRYM 229 (337)
Q Consensus 168 ~~~~v~~~~~~~--------------~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~---~~~l 229 (337)
|...|.+++|++ +.++++++.||.|++||++...... .......|...|.+++|+| + +.+|
T Consensus 146 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~~~~~~~l 224 (379)
T 3jrp_A 146 HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP-TVLLRSYL 224 (379)
T ss_dssp CTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC-CCSSSEEE
T ss_pred CCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECC-CCCCCCeE
Confidence 899999999995 7899999999999999998776432 2233345788999999999 7 8999
Q ss_pred EEEEecCCEEEEEECCCCCCCe--EE--eecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCC
Q 038533 230 ATILMDSNKVVILDIRSPTLPV--AE--LERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 230 ~~~~~d~~~i~i~d~~~~~~~~--~~--~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 289 (337)
++++.|+. |++||++....+. .. ...|...|.+++|+|+++ +|++++.||.|++|++.
T Consensus 225 ~s~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 225 ASVSQDRT-CIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN-VLALSGGDNKVTLWKEN 286 (379)
T ss_dssp EEEETTSC-EEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSC-CEEEEESSSSEEEEEEE
T ss_pred EEEeCCCE-EEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCC-EEEEecCCCcEEEEeCC
Confidence 99999999 9999999753222 12 233788999999999999 99999999999999987
No 86
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-36 Score=279.96 Aligned_cols=252 Identities=21% Similarity=0.322 Sum_probs=211.2
Q ss_pred CCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCC--CCe
Q 038533 66 SFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIE--PKR 141 (337)
Q Consensus 66 ~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~ 141 (337)
..+|.+.|++++|+|++. +|++|+ | .|++||+.++.......+.+|. .+|++++|+| + +++
T Consensus 5 l~gH~~~V~~l~~s~dg~---------~latg~~dg~I~vwd~~~~~~~~~~~l~~h~-----~~V~~l~~s~-~~~~~~ 69 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGK---------RLATCSSDKTIKIFEVEGETHKLIDTLTGHE-----GPVWRVDWAH-PKFGTI 69 (753)
T ss_dssp ---CCCCEEEECCCSSSC---------CEEEEETTTEEEEEEEETTEEEEEEEECCCS-----SCEEEEEECC-TTSCSE
T ss_pred cccCcceeEEEEECCCCC---------eEEEEECCCcEEEEecCCCCCccceeccCCc-----CceEEEEecC-CCCCCE
Confidence 378999999999999998 888876 5 9999999866557788899998 9999999998 6 899
Q ss_pred EEEeeCCCcEEEEeCCCcc--chhhhhccCCceeEEEeC-C--CcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCc
Q 038533 142 IGTCSIDTTCTIWDIEKGV--VETQLIAHDKEVYDICWG-E--ARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPL 216 (337)
Q Consensus 142 l~~~~~dg~i~v~d~~~~~--~~~~~~~~~~~v~~~~~~-~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i 216 (337)
|++|+.||.|++||+++++ .+..+..|...|.+++|+ + ++.+++|+.||.|++||++.......... ..|...+
T Consensus 70 l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~-~~~~~~v 148 (753)
T 3jro_A 70 LASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIII-DAHAIGV 148 (753)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEE-ECCSSCE
T ss_pred EEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEe-ecCCCce
Confidence 9999999999999999886 667777899999999999 5 88999999999999999998743333222 2467899
Q ss_pred eEEEeecC------------CCcEEEEEEecCCEEEEEECCCCC---CCeEEeecccceeeEEEeCCC---CCCeEEEEc
Q 038533 217 LRLAWNKQ------------DLRYMATILMDSNKVVILDIRSPT---LPVAELERHRACVNAIAWAPQ---SRRHICSVG 278 (337)
Q Consensus 217 ~~~~~~~~------------~~~~l~~~~~d~~~i~i~d~~~~~---~~~~~~~~~~~~v~~~~~~~~---~~~~l~~~~ 278 (337)
.+++|+|. ++.++++++.|+. |++||+++.. .+...+.+|...|++++|+|+ +. +|++++
T Consensus 149 ~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~-I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~-~l~s~s 226 (753)
T 3jro_A 149 NSASWAPATIEEDGEHNGTKESRKFVTGGADNL-VKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS-YLASVS 226 (753)
T ss_dssp EEEEECCCC---------CGGGCCEEEEETTSC-EEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE-EEEEEE
T ss_pred EEEEecCcccccccccccCCCCCEEEEEECCCe-EEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCC-EEEEEe
Confidence 99999994 4889999999999 9999998743 345667889999999999999 77 999999
Q ss_pred CCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 279 DDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 279 ~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
.||.|++||+..+. .+..........|...|.+++|+|+++.+++++.||.|++|++
T Consensus 227 ~Dg~I~iwd~~~~~--~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~ 283 (753)
T 3jro_A 227 QDRTCIIWTQDNEQ--GPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 283 (753)
T ss_dssp SSSCEEEEEESSSS--SCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBC
T ss_pred cCCEEEEecCCCCC--CcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEec
Confidence 99999999999332 1111122344568889999999999999999999999999985
No 87
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.3e-35 Score=250.96 Aligned_cols=240 Identities=18% Similarity=0.300 Sum_probs=201.0
Q ss_pred CCCceeEEEEe-c-----ceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecC-CCCcccCcCCcc
Q 038533 20 SPYPLYAMAVC-G-----QRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDP-NSSSRKSSSNRH 92 (337)
Q Consensus 20 ~~~~v~~~~~s-~-----~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~-~~~~~~~~~~~~ 92 (337)
+...|++++|+ . ++|++|+. ||.|++|++......... ..|...|.+++|+| ++.
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~----dg~i~v~d~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~--------- 129 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGS----RGIIRIINPITMQCIKHY-----VGHGNAINELKFHPRDPN--------- 129 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEET----TCEEEEECTTTCCEEEEE-----ESCCSCEEEEEECSSCTT---------
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecC----CCEEEEEEchhceEeeee-----cCCCCcEEEEEECCCCCC---------
Confidence 45789999999 2 58999996 999999988765443332 57999999999999 777
Q ss_pred EEEEeC-C-eEEEEecCCCCccceeee---cCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhc
Q 038533 93 LLASSG-D-FLRLWDVGDSSIEPVAVL---NNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIA 167 (337)
Q Consensus 93 ~l~~~~-~-~v~vw~~~~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~ 167 (337)
+|++++ | .|++||+.++ +....+ ..|. ..|.+++|+| ++++|++++.||.|++||+++++....+..
T Consensus 130 ~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~-----~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 201 (366)
T 3k26_A 130 LLLSVSKDHALRLWNIQTD--TLVAIFGGVEGHR-----DEVLSADYDL-LGEKIMSCGMDHSLKLWRINSKRMMNAIKE 201 (366)
T ss_dssp EEEEEETTSCEEEEETTTT--EEEEEECSTTSCS-----SCEEEEEECT-TSSEEEEEETTSCEEEEESCSHHHHHHHHH
T ss_pred EEEEEeCCCeEEEEEeecC--eEEEEeccccccc-----CceeEEEECC-CCCEEEEecCCCCEEEEECCCCccccccce
Confidence 888877 5 9999999988 566666 5677 8999999999 999999999999999999999887766665
Q ss_pred ----------------------------cCCceeEEEeCCCcEEEEEcCCCeEEEEECCCCCCc-----------eeeec
Q 038533 168 ----------------------------HDKEVYDICWGEARVFASVSADGSVRIFDLRDKEHS-----------TIIYE 208 (337)
Q Consensus 168 ----------------------------~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-----------~~~~~ 208 (337)
|...|.+++|+ ++++++++.|+.|++||+++.... ..+..
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~ 280 (366)
T 3k26_A 202 SYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGR 280 (366)
T ss_dssp HHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEE
T ss_pred eEEecCCCCcccccceeeccCccccccCCcceEEEEEEc-CCEEEEEecCCEEEEEeCCCccccccccccCCcchheecc
Confidence 89999999998 789999999999999999877541 11222
Q ss_pred CCCCCCCceEEEeecCC--CcEEEEEEecCCEEEEEECCCCCC---CeEEeecc--cceeeEEEeCCCCCCeEEEEcCCC
Q 038533 209 SPQPDTPLLRLAWNKQD--LRYMATILMDSNKVVILDIRSPTL---PVAELERH--RACVNAIAWAPQSRRHICSVGDDS 281 (337)
Q Consensus 209 ~~~~~~~i~~~~~~~~~--~~~l~~~~~d~~~i~i~d~~~~~~---~~~~~~~~--~~~v~~~~~~~~~~~~l~~~~~dg 281 (337)
...|...+.+++|+| + +.+|++++.|+. |++||+++... ....+..| ...|++++|+|+++ +|++++.||
T Consensus 281 ~~~~~~~v~~~~~s~-~~~~~~l~~~~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg 357 (366)
T 3k26_A 281 FDYSQCDIWYMRFSM-DFWQKMLALGNQVGK-LYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSS-ILIAVCDDA 357 (366)
T ss_dssp EECSSCCSSCCCCEE-CTTSSEEEEECTTSC-EEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSS-EEEEEETTS
T ss_pred ccccCCcEEEEEEcC-CCCCcEEEEEecCCc-EEEEECCCCCCccccceEEcccccCCceEEEEeCCCCC-eEEEEeCCC
Confidence 234677899999999 7 999999999999 99999987431 33467777 68999999999999 999999999
Q ss_pred cEEEEeCC
Q 038533 282 QAFIWELP 289 (337)
Q Consensus 282 ~i~iw~~~ 289 (337)
.|++||+.
T Consensus 358 ~i~iwd~~ 365 (366)
T 3k26_A 358 SIWRWDRL 365 (366)
T ss_dssp EEEEEEC-
T ss_pred EEEEEEec
Confidence 99999986
No 88
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.4e-35 Score=289.46 Aligned_cols=275 Identities=17% Similarity=0.298 Sum_probs=233.8
Q ss_pred eCCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEE
Q 038533 19 ESPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLAS 96 (337)
Q Consensus 19 ~~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~ 96 (337)
.....+.+++|+ ++++++|+. +|.|++|++......... .+|...|.+++|+|+++ +|++
T Consensus 959 ~~~~~i~~~~~sp~g~~l~~g~~----~g~i~i~d~~~~~~~~~~-----~~h~~~v~~l~~s~dg~---------~l~s 1020 (1249)
T 3sfz_A 959 LPEAQVSCCCLSPHLEYVAFGDE----DGAIKIIELPNNRVFSSG-----VGHKKAVRHIQFTADGK---------TLIS 1020 (1249)
T ss_dssp ECCSCEEEEEECTTSSEEEEEET----TSCCEEEETTTTSCEEEC-----CCCSSCCCCEEECSSSS---------CEEE
T ss_pred cccCcEEEEEEcCCCCEEEEEcC----CCCEEEEEcCCCceeeec-----ccCCCceEEEEECCCCC---------EEEE
Confidence 345679999999 899999997 999999998765543332 68999999999999998 8888
Q ss_pred eC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCceeE
Q 038533 97 SG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYD 174 (337)
Q Consensus 97 ~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~ 174 (337)
++ | .|++||+.+++ .. .+..|. ..|.+++|+| + ..+++++.||.|++||+.+++.+..+.+|...|.+
T Consensus 1021 ~~~dg~i~vwd~~~~~--~~-~~~~~~-----~~v~~~~~~~-~-~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~ 1090 (1249)
T 3sfz_A 1021 SSEDSVIQVWNWQTGD--YV-FLQAHQ-----ETVKDFRLLQ-D-SRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLS 1090 (1249)
T ss_dssp ECSSSBEEEEETTTTE--EE-CCBCCS-----SCEEEEEECS-S-SEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCC
T ss_pred EcCCCEEEEEECCCCc--eE-EEecCC-----CcEEEEEEcC-C-CcEEEEECCCcEEEEECCCCceeEEEcccCCcEEE
Confidence 87 5 99999999883 33 345666 8999999998 4 56888999999999999999999999999999999
Q ss_pred EEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEE
Q 038533 175 ICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAE 253 (337)
Q Consensus 175 ~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~ 253 (337)
++|+ +++++++++.||.|++||+.+++....+ ..|...|.+++|+| ++.+|++++.|+. |++||+.+ ++++..
T Consensus 1091 ~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l---~~h~~~v~~~~~s~-dg~~lat~~~dg~-i~vwd~~~-~~~~~~ 1164 (1249)
T 3sfz_A 1091 CAISSDATKFSSTSADKTAKIWSFDLLSPLHEL---KGHNGCVRCSAFSL-DGILLATGDDNGE-IRIWNVSD-GQLLHS 1164 (1249)
T ss_dssp EEECSSSSSCEEECCSSCCCEECSSSSSCSBCC---CCCSSCEEEEEECS-SSSEEEEEETTSC-CCEEESSS-SCCCCC
T ss_pred EEECCCCCEEEEEcCCCcEEEEECCCcceeeee---ccCCCcEEEEEECC-CCCEEEEEeCCCE-EEEEECCC-CceEEE
Confidence 9999 7899999999999999999988754333 35778999999999 9999999999999 99999987 434443
Q ss_pred e---------ecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceE
Q 038533 254 L---------ERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWL 324 (337)
Q Consensus 254 ~---------~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 324 (337)
+ ..|...|++++|+|+++ +|++++ |.|++||+..++ ....+..|...|.+++|+|+++.++
T Consensus 1165 ~~~~~~~~~~~~~~~~v~~l~fs~dg~-~l~s~~--g~v~vwd~~~g~-------~~~~~~~~~~~i~~~~~s~dg~~l~ 1234 (1249)
T 3sfz_A 1165 CAPISVEEGTATHGGWVTDVCFSPDSK-TLVSAG--GYLKWWNVATGD-------SSQTFYTNGTNLKKIHVSPDFRTYV 1234 (1249)
T ss_dssp CCCCC-------CCSCCCEEEECTTSS-CEEEES--SSEEEBCSSSCB-------CCCCCCCSSCCCCCCEECSSSCCEE
T ss_pred eccccccccccccCceEEEEEECCCCC-EEEECC--CeEEEEECCCCc-------eeeeeeccCCcccEEEECCCCCEEE
Confidence 3 56889999999999999 888886 899999998322 2345667888999999999999999
Q ss_pred EEEcCCcEEEEeC
Q 038533 325 AIAFSNKMQLLKV 337 (337)
Q Consensus 325 ~~~~d~~i~iw~l 337 (337)
+++.||.+++|++
T Consensus 1235 ~~~~dg~v~vw~l 1247 (1249)
T 3sfz_A 1235 TVDNLGILYILQV 1247 (1249)
T ss_dssp EECTTCCEEEECC
T ss_pred EecCCcEEEEEee
Confidence 9999999999986
No 89
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-34 Score=245.44 Aligned_cols=242 Identities=15% Similarity=0.248 Sum_probs=209.7
Q ss_pred CCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEE
Q 038533 67 FDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGT 144 (337)
Q Consensus 67 ~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 144 (337)
.+|...|++++|+|++. +|++++ + .|++||+.++ +....+.+|. ..|.+++|+| ++++|++
T Consensus 29 ~~h~~~v~~~~~s~~~~---------~l~~~~~dg~i~vwd~~~~--~~~~~~~~h~-----~~v~~~~~~~-~~~~l~s 91 (369)
T 3zwl_B 29 TGHERPLTQVKYNKEGD---------LLFSCSKDSSASVWYSLNG--ERLGTLDGHT-----GTIWSIDVDC-FTKYCVT 91 (369)
T ss_dssp ECCSSCEEEEEECTTSC---------EEEEEESSSCEEEEETTTC--CEEEEECCCS-----SCEEEEEECT-TSSEEEE
T ss_pred EEeeceEEEEEEcCCCC---------EEEEEeCCCEEEEEeCCCc--hhhhhhhhcC-----CcEEEEEEcC-CCCEEEE
Confidence 68999999999999998 888877 5 9999999988 6788888888 9999999999 9999999
Q ss_pred eeCCCcEEEEeCCCccchhhhhccCCceeEEEeC-CCcEEEEEcCC-----CeEEEEECCCCCCceeee----------c
Q 038533 145 CSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWG-EARVFASVSAD-----GSVRIFDLRDKEHSTIIY----------E 208 (337)
Q Consensus 145 ~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~----------~ 208 (337)
++.||.|++||+++++.+..+. +...+.+++|+ +++++++++.+ +.|++||++......... .
T Consensus 92 ~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 170 (369)
T 3zwl_B 92 GSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKII 170 (369)
T ss_dssp EETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEE
T ss_pred EeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeecc
Confidence 9999999999999999888777 88899999999 79999999998 999999998765322211 1
Q ss_pred CCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeC
Q 038533 209 SPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWEL 288 (337)
Q Consensus 209 ~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~ 288 (337)
.......+.+++|+| ++++|++++.++. |++||+++...++..+..|...|.+++|+|++. +|++++.||.|++||+
T Consensus 171 ~~~~~~~~~~~~~~~-~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~d~ 247 (369)
T 3zwl_B 171 THEGLDAATVAGWST-KGKYIIAGHKDGK-ISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLT-YFITSSRDTNSFLVDV 247 (369)
T ss_dssp CCTTCCCEEEEEECG-GGCEEEEEETTSE-EEEEETTTTTEEEEEEECCSSCEEEEEECTTSS-EEEEEETTSEEEEEET
T ss_pred CCcCccceeEEEEcC-CCCEEEEEcCCCE-EEEEECCCCcEeEEEEecCCCceeEEEECCCCC-EEEEecCCceEEEEEC
Confidence 111223899999999 9999999999998 999999986677888889999999999999999 9999999999999999
Q ss_pred CCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEcCC--------------cEEEEeC
Q 038533 289 PLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSN--------------KMQLLKV 337 (337)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--------------~i~iw~l 337 (337)
+... ......+...+..++|+|+++.+++++.++ .+++|++
T Consensus 248 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~ 302 (369)
T 3zwl_B 248 STLQ--------VLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHK 302 (369)
T ss_dssp TTCC--------EEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEET
T ss_pred CCCc--------eeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEec
Confidence 8222 444455888999999999999999999887 7888874
No 90
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.2e-35 Score=253.06 Aligned_cols=242 Identities=14% Similarity=0.173 Sum_probs=205.6
Q ss_pred CCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCC----ccceeeecCCCCCcccCCeeEEEeecCC--
Q 038533 67 FDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSS----IEPVAVLNNSKSSEFCAPLTSFDWNEIE-- 138 (337)
Q Consensus 67 ~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~~-- 138 (337)
.+|.+.|++++|+| . +|++++ | .|++|++.+++ ......+.+|. .+|.+++|+| +
T Consensus 13 ~~h~~~i~~~~~~~--~---------~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~-----~~v~~~~~~~-~~~ 75 (397)
T 1sq9_A 13 KAHDADIFSVSACN--S---------FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHK-----SGLHHVDVLQ-AIE 75 (397)
T ss_dssp SCSSSCEEEEEECS--S---------EEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCT-----TCEEEEEEEE-EEE
T ss_pred hhhhcCeEEEEecC--C---------eEEEEcCCCEEEEEECCCcccccCCCcceEEecCC-----CcEEEEEEec-ccc
Confidence 68999999999998 5 666666 6 99999999884 33678888888 9999999999 7
Q ss_pred --C---CeEEEeeCCCcEEEEeCCCccc-----hhhhhcc-----CCceeEEEeC----C-CcE-EEEEcCCCeEEEEEC
Q 038533 139 --P---KRIGTCSIDTTCTIWDIEKGVV-----ETQLIAH-----DKEVYDICWG----E-ARV-FASVSADGSVRIFDL 197 (337)
Q Consensus 139 --~---~~l~~~~~dg~i~v~d~~~~~~-----~~~~~~~-----~~~v~~~~~~----~-~~~-l~~~~~dg~i~iwd~ 197 (337)
+ ++|++++.||.|++||+.+++. +..+..| ...|.+++|+ + +++ |++++.||.|++||+
T Consensus 76 ~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~ 155 (397)
T 1sq9_A 76 RDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKF 155 (397)
T ss_dssp TTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEE
T ss_pred cCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeC
Confidence 8 9999999999999999998886 7777778 5899999999 4 677 999999999999999
Q ss_pred CC------CCCce-----eeec----CCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeec---c--
Q 038533 198 RD------KEHST-----IIYE----SPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELER---H-- 257 (337)
Q Consensus 198 ~~------~~~~~-----~~~~----~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~---~-- 257 (337)
+. .+... .+.. ...+...+.+++|+| ++ +|++++.|+. |++||+++ .+++..+.. |
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~-~l~~~~~dg~-i~i~d~~~-~~~~~~~~~~~~h~~ 231 (397)
T 1sq9_A 156 HPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE-RG-LIATGFNNGT-VQISELST-LRPLYNFESQHSMIN 231 (397)
T ss_dssp ESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECT-TS-EEEEECTTSE-EEEEETTT-TEEEEEEECCC---C
T ss_pred CccccccccceeeccCcceeeeeeccccCCCCCceEEEECC-Cc-eEEEEeCCCc-EEEEECCC-CceeEEEeccccccc
Confidence 98 55443 3321 024678999999999 88 9999999998 99999998 667888888 8
Q ss_pred -cceeeEEEeCCCCCCeEEEEcCC---CcEEEEeCCCCCCCCCCCCCceeeee-------------CCCceeEEEEccCC
Q 038533 258 -RACVNAIAWAPQSRRHICSVGDD---SQAFIWELPLPPVAGPNGIDPMSMYS-------------AGSEINQLQWSPAQ 320 (337)
Q Consensus 258 -~~~v~~~~~~~~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~ 320 (337)
...|.+++|+|++. +|++++.| |.|++||++.++ ....+.. |...|.+++|+|++
T Consensus 232 ~~~~i~~i~~~~~~~-~l~~~~~d~~~g~i~i~d~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 303 (397)
T 1sq9_A 232 NSNSIRSVKFSPQGS-LLAIAHDSNSFGCITLYETEFGE-------RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSG 303 (397)
T ss_dssp CCCCEEEEEECSSTT-EEEEEEEETTEEEEEEEETTTCC-------EEEEECBC--------CCBSBSSCEEEEEECSSS
T ss_pred cCCccceEEECCCCC-EEEEEecCCCCceEEEEECCCCc-------ccceeccCcccccccccccccCCcEEEEEECCCC
Confidence 99999999999998 99999999 999999998222 2335555 89999999999999
Q ss_pred CceEEEEcCCcEEEEeC
Q 038533 321 PDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 321 ~~l~~~~~d~~i~iw~l 337 (337)
++|++++.||.|++|++
T Consensus 304 ~~l~~~~~dg~i~iwd~ 320 (397)
T 1sq9_A 304 ETLCSAGWDGKLRFWDV 320 (397)
T ss_dssp SEEEEEETTSEEEEEET
T ss_pred CEEEEEeCCCeEEEEEc
Confidence 99999999999999985
No 91
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.6e-34 Score=249.45 Aligned_cols=282 Identities=10% Similarity=0.020 Sum_probs=215.1
Q ss_pred CceeEEEEe--cceEEEeeeeccCcceEEEEEecCCC---cceecCCC--------------------------------
Q 038533 22 YPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPES---LSIKTHPS-------------------------------- 64 (337)
Q Consensus 22 ~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~---~~~~~~~~-------------------------------- 64 (337)
.++.+++|+ |++|+++. ++.|++|++.... ........
T Consensus 5 ~p~~~v~~s~dg~~l~~~~-----~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAII-----KNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSN 79 (450)
T ss_dssp CCCCEEEECSSSSEEEEEE-----TTEEEEEEEETTTEEEEEEEEECCC-------------------------------
T ss_pred ccEEEEEecCCCCEEEEEe-----CCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccC
Confidence 578999999 77666665 8999999987654 11000000
Q ss_pred -----------------cCCCCCCCCeEEEecCCCCcccCcCCccEE-EEeC-C-eEEEEecC--CCCccceeeec--CC
Q 038533 65 -----------------LSFDHPYPPTKLMFDPNSSSRKSSSNRHLL-ASSG-D-FLRLWDVG--DSSIEPVAVLN--NS 120 (337)
Q Consensus 65 -----------------~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l-~~~~-~-~v~vw~~~--~~~~~~~~~~~--~~ 120 (337)
-...|...|.+++|+|+++ +| ++++ | .|++||+. ++ .....+. .|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~---------~l~~~~~~dg~v~iwd~~~~~~--~~~~~~~~~~~ 148 (450)
T 2vdu_B 80 KGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDES---------RLIACADSDKSLLVFDVDKTSK--NVLKLRKRFCF 148 (450)
T ss_dssp --------------------CCCCCEEEEEECTTSS---------EEEEEEGGGTEEEEEEECSSSS--SCEEEEEEEEC
T ss_pred cCccccccCccccCCCCCCCccCCceEEEEEcCCCC---------EEEEEECCCCeEEEEECcCCCC--ceeeeeecccC
Confidence 0014556799999999998 64 7876 5 99999999 66 4555554 44
Q ss_pred CCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchh----hhhccCCceeEEEeC-C---CcEEEEEcCCCeE
Q 038533 121 KSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVET----QLIAHDKEVYDICWG-E---ARVFASVSADGSV 192 (337)
Q Consensus 121 ~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~----~~~~~~~~v~~~~~~-~---~~~l~~~~~dg~i 192 (337)
. ..|.+++|+| ++++|++|+.+|.|++|++.+++... .+.+|...|.+++|+ + +++|++++.|+.|
T Consensus 149 ~-----~~v~~~~~sp-~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i 222 (450)
T 2vdu_B 149 S-----KRPNAISIAE-DDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHI 222 (450)
T ss_dssp S-----SCEEEEEECT-TSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCE
T ss_pred C-----CCceEEEEcC-CCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcE
Confidence 4 7899999999 99999999999999999998887554 778899999999999 6 7899999999999
Q ss_pred EEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeecc---------------
Q 038533 193 RIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERH--------------- 257 (337)
Q Consensus 193 ~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~--------------- 257 (337)
++||+++++....... .|...|.+++|+ ++.+|++++.|+. |++||+++ ++++..+..+
T Consensus 223 ~vwd~~~~~~~~~~~~--~h~~~v~~~~~s--d~~~l~s~~~d~~-v~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (450)
T 2vdu_B 223 KISHYPQCFIVDKWLF--GHKHFVSSICCG--KDYLLLSAGGDDK-IFAWDWKT-GKNLSTFDYNSLIKPYLNDQHLAPP 296 (450)
T ss_dssp EEEEESCTTCEEEECC--CCSSCEEEEEEC--STTEEEEEESSSE-EEEEETTT-CCEEEEEECHHHHGGGCCTTSBC--
T ss_pred EEEECCCCceeeeeec--CCCCceEEEEEC--CCCEEEEEeCCCe-EEEEECCC-CcEeeeecchhhhhhhhhhcccccc
Confidence 9999998875544332 477899999999 8999999999998 99999998 5556666522
Q ss_pred ----------cceeeEEEeCCCCCCeEEEEc-CCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEE
Q 038533 258 ----------RACVNAIAWAPQSRRHICSVG-DDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAI 326 (337)
Q Consensus 258 ----------~~~v~~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 326 (337)
...|.+++|+|+++ +|++++ .|+.|++|++....... -.....+..| ..|.+++|+|++ .++++
T Consensus 297 ~~~~~~~~~~~~~v~~i~~~~~~~-~l~~~~~~d~~i~iw~~~~~~~~~--l~~~~~~~~~-~~v~~~~~~~~~-~~v~~ 371 (450)
T 2vdu_B 297 RFQNENNDIIEFAVSKIIKSKNLP-FVAFFVEATKCIIILEMSEKQKGD--LALKQIITFP-YNVISLSAHNDE-FQVTL 371 (450)
T ss_dssp --------CBCCCEEEEEECSSSS-EEEEEETTCSEEEEEEECSSSTTC--EEEEEEEECS-SCEEEEEEETTE-EEEEE
T ss_pred cccccccccceEEEEEEEEeCCCC-EEEEEECCCCeEEEEEeccCCCCc--eeeccEeccC-CceEEEEecCCc-EEEEE
Confidence 35689999999999 888887 89999999992002110 0112234455 889999999964 55555
Q ss_pred Ec-------CCcEEEEe
Q 038533 327 AF-------SNKMQLLK 336 (337)
Q Consensus 327 ~~-------d~~i~iw~ 336 (337)
+. ++.|.+|.
T Consensus 372 ~~~~~~~~~~~~i~v~~ 388 (450)
T 2vdu_B 372 DNKESSGVQKNFAKFIE 388 (450)
T ss_dssp CCTTCCSSCCCSEEEEE
T ss_pred ecccCCCCCCcceEEEE
Confidence 43 45578885
No 92
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=2.6e-35 Score=253.21 Aligned_cols=302 Identities=12% Similarity=0.106 Sum_probs=202.1
Q ss_pred eeeeCCCceeEEEEe------cceEEEeeeeccCcceEEEEEecCCCcce----ecCCCcCCCCCCCCeEEEecCCCCc-
Q 038533 16 VTHESPYPLYAMAVC------GQRIAVGSFIEDYTNRVDVVSFEPESLSI----KTHPSLSFDHPYPPTKLMFDPNSSS- 84 (337)
Q Consensus 16 ~~~~~~~~v~~~~~s------~~~la~g~~~~~~d~~i~i~~~~~~~~~~----~~~~~~~~~~~~~i~~i~~~~~~~~- 84 (337)
+.+..+...++++|. .+++++|. ++.|.+|+...+.... .........+..++..+.|++....
T Consensus 10 ~~lpl~~~p~~~~w~~~~~~~~~l~a~g~-----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (393)
T 4gq1_A 10 YQLPLNVRPYTTTWCSQSPSCSNLLAIGH-----DTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCSYS 84 (393)
T ss_dssp EECCTTCCEEEEEECTTSGGGTTEEEEEE-----SSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCEEE
T ss_pred eEecCCCCCeEEEEeCCCCCCCCEEEEEC-----CCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCcccc
Confidence 445556778888886 45677666 8999999876433211 0000111344555666666543210
Q ss_pred ----------ccCcCCccEEEEeC-C-eEEEEecCCCCcc---ceeeecCCCCCcccCCeeEEEeec-------CCCCeE
Q 038533 85 ----------RKSSSNRHLLASSG-D-FLRLWDVGDSSIE---PVAVLNNSKSSEFCAPLTSFDWNE-------IEPKRI 142 (337)
Q Consensus 85 ----------~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~-------~~~~~l 142 (337)
........+||+++ | +|+|||+.+++.. ....+.+|. ..|.+++|+| .++++|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~-----~~v~~v~~~p~~~~~~~~d~~~l 159 (393)
T 4gq1_A 85 ENLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHH-----NFVNDIDIADVYSADNRLAEQVI 159 (393)
T ss_dssp CC----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCS-----SCEEEEEEEEEECTTCSEEEEEE
T ss_pred ccccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCC-----CceEEEEEccccccccCCCCCEE
Confidence 00011224788887 5 9999999987432 234567787 9999999986 267899
Q ss_pred EEeeCCCcEEEEeCCCccchhhhhccCCceeEEEeCC-C-cEEEEEcCCCeEEEEECCCCCCceeee-------------
Q 038533 143 GTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGE-A-RVFASVSADGSVRIFDLRDKEHSTIIY------------- 207 (337)
Q Consensus 143 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~-~-~~l~~~~~dg~i~iwd~~~~~~~~~~~------------- 207 (337)
++|+.|++|+|||++++..+..+..|...+.+++|+| + .+|++++.|++|++||+++++......
T Consensus 160 as~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~ 239 (393)
T 4gq1_A 160 ASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTL 239 (393)
T ss_dssp EEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEE
T ss_pred EEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEec
Confidence 9999999999999998888878888999999999994 3 589999999999999998875432211
Q ss_pred ---------cCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeecccceeeEE--------------
Q 038533 208 ---------ESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAI-------------- 264 (337)
Q Consensus 208 ---------~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~-------------- 264 (337)
....|...+.++.|++.++..+++++.|+. +++||++. ......+..|...+..+
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~-i~vwd~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 317 (393)
T 4gq1_A 240 NTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGA-WLRWNLFA-NNDYNEISDSTMKLGPKNLLPNVQGISLFPS 317 (393)
T ss_dssp ESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSE-EEEEEC--------------------CCSCSEEEECSSCC
T ss_pred ccccceeeeecccccccceeeeeecCCCCEEEEEeCCCC-EEEEECcc-CCCCceEeeecCccccEEEccccccccccCc
Confidence 112456788999998659999999999998 99999986 33334444443333322
Q ss_pred ----EeCC-CCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 265 ----AWAP-QSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 265 ----~~~~-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
.|+| .+..++++|+.||.|++||+. + +........|..+|.+++|+|+|++|++++.| .+.+|++
T Consensus 318 ~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~--~-----~~~~~~~~~~~~~V~svafspdG~~LA~as~~-Gv~lvrL 387 (393)
T 4gq1_A 318 LLGACPHPRYMDYFATAHSQHGLIQLINTY--E-----KDSNSIPIQLGMPIVDFCWHQDGSHLAIATEG-SVLLTRL 387 (393)
T ss_dssp SSCCEECSSCTTEEEEEETTTTEEEEEETT--C-----TTCCEEEEECSSCEEEEEECTTSSEEEEEESS-EEEEEEE
T ss_pred ceeEEEccCCCCEEEEEECCCCEEEEEECC--C-----CcEEEEecCCCCcEEEEEEcCCCCEEEEEeCC-CeEEEEE
Confidence 3333 333367788999999999998 3 22345677899999999999999887777655 4666653
No 93
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.9e-34 Score=250.85 Aligned_cols=255 Identities=19% Similarity=0.322 Sum_probs=206.2
Q ss_pred ceeeeeCCCceeEEEEe---cceEEEeeeeccCcceEEEEEecCCCcc------eecCCCcCCCCCCCCeEEEecCCCCc
Q 038533 14 NSVTHESPYPLYAMAVC---GQRIAVGSFIEDYTNRVDVVSFEPESLS------IKTHPSLSFDHPYPPTKLMFDPNSSS 84 (337)
Q Consensus 14 ~~~~~~~~~~v~~~~~s---~~~la~g~~~~~~d~~i~i~~~~~~~~~------~~~~~~~~~~~~~~i~~i~~~~~~~~ 84 (337)
....+.|.++|++++|+ +.+||+|+. +|.|+||++...... ...... ...|...|.+++|+|++.
T Consensus 121 ~~~~~~h~~~v~~l~~~p~~~~~lat~~~----dg~V~vwd~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~l~~~~~~~- 194 (430)
T 2xyi_A 121 IEIKINHEGEVNRARYMPQNACVIATKTP----SSDVLVFDYTKHPSKPEPSGECQPDLR-LRGHQKEGYGLSWNPNLN- 194 (430)
T ss_dssp EEEEEEESSCCSEEEEETTEEEEEEEECS----SSCEEEEEGGGSCSSCCTTCCCCCSEE-EECCSSCCCCEEECTTST-
T ss_pred EEEEEcCCCcEEEEEECCCCCcEEEEECC----CCcEEEEECCCcccccCccccCCCcEE-ecCCCCCeEEEEeCCCCC-
Confidence 34567789999999999 468999886 999999999863110 111111 258999999999999986
Q ss_pred ccCcCCccEEEEeC-C-eEEEEecCCCCc-----cceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCC
Q 038533 85 RKSSSNRHLLASSG-D-FLRLWDVGDSSI-----EPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIE 157 (337)
Q Consensus 85 ~~~~~~~~~l~~~~-~-~v~vw~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~ 157 (337)
.+|++|+ + .|++|++..+.. .....+.+|. ..|.+++|+|.++.+|++++.||.|++||++
T Consensus 195 -------~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~-----~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~ 262 (430)
T 2xyi_A 195 -------GYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHT-----AVVEDVAWHLLHESLFGSVADDQKLMIWDTR 262 (430)
T ss_dssp -------TEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCS-----SCEEEEEECSSCTTEEEEEETTSEEEEEETT
T ss_pred -------CeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCC-----CCEeeeEEeCCCCCEEEEEeCCCeEEEEECC
Confidence 5888887 5 999999988431 1245666777 8999999999678899999999999999999
Q ss_pred Cc---cchhhhhccCCceeEEEeC-CCc-EEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEE
Q 038533 158 KG---VVETQLIAHDKEVYDICWG-EAR-VFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATI 232 (337)
Q Consensus 158 ~~---~~~~~~~~~~~~v~~~~~~-~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 232 (337)
++ +.+..+..|...|++++|+ ++. ++++|+.||.|++||++.......... .|...|.+++|+|....+|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~--~h~~~v~~i~~sp~~~~~l~s~ 340 (430)
T 2xyi_A 263 NNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE--SHKDEIFQVQWSPHNETILASS 340 (430)
T ss_dssp CSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE--CCSSCEEEEEECSSCTTEEEEE
T ss_pred CCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEee--cCCCCEEEEEECCCCCCEEEEE
Confidence 87 4666777899999999999 454 799999999999999998553333333 3678999999999333679999
Q ss_pred EecCCEEEEEECCCCC-------------CCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCC
Q 038533 233 LMDSNKVVILDIRSPT-------------LPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 233 ~~d~~~i~i~d~~~~~-------------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 289 (337)
+.|+. |++||++... .++..+.+|...|++++|+|+++.+|++++.||.|++|++.
T Consensus 341 ~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 341 GTDRR-LHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp ETTSC-CEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred eCCCc-EEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 99998 9999998632 45667778999999999999998789999999999999997
No 94
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=9.6e-35 Score=246.34 Aligned_cols=249 Identities=14% Similarity=0.234 Sum_probs=199.5
Q ss_pred CCCCCCCeEEEecCCCCcccCcCCccEEEEeC----C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCC---
Q 038533 67 FDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG----D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIE--- 138 (337)
Q Consensus 67 ~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~----~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--- 138 (337)
.+|...|.+++|+|++. .++++++ | .|++||+.+++......+ +|. .+|.+++|+| +
T Consensus 15 ~~h~~~v~~~~~~p~~~--------~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~-~~~-----~~v~~~~~~~-~~~~ 79 (357)
T 3i2n_A 15 KGFNYTVFDCKWVPCSA--------KFVTMGNFARGTGVIQLYEIQHGDLKLLREI-EKA-----KPIKCGTFGA-TSLQ 79 (357)
T ss_dssp EECSSCEEEEEECTTSS--------EEEEEEC--CCCEEEEEEEECSSSEEEEEEE-EES-----SCEEEEECTT-CCTT
T ss_pred cCCCCceEEEEEcCCCc--------eEEEecCccCCCcEEEEEeCCCCcccceeee-ccc-----CcEEEEEEcC-CCCC
Confidence 56999999999999997 4666763 6 999999998854333333 555 8999999999 6
Q ss_pred CCeEEEeeCCCcEEEEeCCCcc-chhhhhccCCceeEEE------eC-CCcEEEEEcCCCeEEEEECCCCCC-ceeeecC
Q 038533 139 PKRIGTCSIDTTCTIWDIEKGV-VETQLIAHDKEVYDIC------WG-EARVFASVSADGSVRIFDLRDKEH-STIIYES 209 (337)
Q Consensus 139 ~~~l~~~~~dg~i~v~d~~~~~-~~~~~~~~~~~v~~~~------~~-~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~ 209 (337)
+++|++|+.||.|++||+++++ .+..+.+|...|.+++ |+ ++++|++++.||.|++||+++.+. ...+...
T Consensus 80 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~ 159 (357)
T 3i2n_A 80 QRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPV 159 (357)
T ss_dssp TCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCC
T ss_pred CceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceecccc
Confidence 6999999999999999999988 7888889999999995 46 588999999999999999998873 3333222
Q ss_pred CC-CCCCceEEE----eecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeecccceeeEEEeCC---CCCCeEEEEcCCC
Q 038533 210 PQ-PDTPLLRLA----WNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAP---QSRRHICSVGDDS 281 (337)
Q Consensus 210 ~~-~~~~i~~~~----~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~l~~~~~dg 281 (337)
.. ....+.+++ |+| ++.+|++++.++. |++||+++ .+. .....|...|.+++|+| ++. +|++++.||
T Consensus 160 ~~~~~~~v~~~~~~~~~~~-~~~~l~~~~~d~~-i~i~d~~~-~~~-~~~~~~~~~v~~~~~~~~~~~~~-~l~~~~~dg 234 (357)
T 3i2n_A 160 QGENKRDCWTVAFGNAYNQ-EERVVCAGYDNGD-IKLFDLRN-MAL-RWETNIKNGVCSLEFDRKDISMN-KLVATSLEG 234 (357)
T ss_dssp TTSCCCCEEEEEEECCCC--CCCEEEEEETTSE-EEEEETTT-TEE-EEEEECSSCEEEEEESCSSSSCC-EEEEEESTT
T ss_pred CCCCCCceEEEEEEeccCC-CCCEEEEEccCCe-EEEEECcc-Cce-eeecCCCCceEEEEcCCCCCCCC-EEEEECCCC
Confidence 11 234788998 677 9999999999998 99999998 333 34466889999999999 888 999999999
Q ss_pred cEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCC-ceEEEEcCCcEEEEeC
Q 038533 282 QAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQP-DWLAIAFSNKMQLLKV 337 (337)
Q Consensus 282 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~l 337 (337)
.|++||++...... .........|...|.+++|+|+++ .+++++.||.|++|++
T Consensus 235 ~i~i~d~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~ 289 (357)
T 3i2n_A 235 KFHVFDMRTQHPTK--GFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKY 289 (357)
T ss_dssp EEEEEEEEEEETTT--EEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEE
T ss_pred eEEEEeCcCCCccc--ceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeec
Confidence 99999998322110 000112337999999999999998 6888999999999984
No 95
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.2e-34 Score=271.48 Aligned_cols=242 Identities=15% Similarity=0.203 Sum_probs=212.1
Q ss_pred CCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEE
Q 038533 67 FDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGT 144 (337)
Q Consensus 67 ~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 144 (337)
.+|.+.|.+++|+|+++ +|++++ + .|+|||+.++ .....+.+|. .+|.+++|+| ++++|++
T Consensus 10 ~~h~~~v~~i~~sp~~~---------~la~~~~~g~v~iwd~~~~--~~~~~~~~~~-----~~v~~~~~s~-~~~~l~~ 72 (814)
T 3mkq_A 10 SNRSDRVKGIDFHPTEP---------WVLTTLYSGRVEIWNYETQ--VEVRSIQVTE-----TPVRAGKFIA-RKNWIIV 72 (814)
T ss_dssp EEECSCEEEEEECSSSS---------EEEEEETTSEEEEEETTTT--EEEEEEECCS-----SCEEEEEEEG-GGTEEEE
T ss_pred ecCCCceEEEEECCCCC---------EEEEEeCCCEEEEEECCCC--ceEEEEecCC-----CcEEEEEEeC-CCCEEEE
Confidence 57999999999999999 888887 5 9999999998 6788888888 9999999999 9999999
Q ss_pred eeCCCcEEEEeCCCccchhhhhccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeec
Q 038533 145 CSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNK 223 (337)
Q Consensus 145 ~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~ 223 (337)
|+.||.|++||+.+++.+..+.+|...|.+++|+ ++.+|++++.||.|++||++++........ .|...+.+++|+|
T Consensus 73 ~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~--~~~~~v~~~~~~p 150 (814)
T 3mkq_A 73 GSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE--GHEHFVMCVAFNP 150 (814)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEE--CCSSCEEEEEEET
T ss_pred EeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEc--CCCCcEEEEEEEc
Confidence 9999999999999999999999999999999999 788999999999999999988743333333 3678999999999
Q ss_pred CCCcEEEEEEecCCEEEEEECCCCCCCeEEeecc-cceeeEEEeCC--CCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCC
Q 038533 224 QDLRYMATILMDSNKVVILDIRSPTLPVAELERH-RACVNAIAWAP--QSRRHICSVGDDSQAFIWELPLPPVAGPNGID 300 (337)
Q Consensus 224 ~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~~~--~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 300 (337)
.++..|++++.|+. |++||++... +...+..+ ...+.+++|+| +++ +|++++.||.|++||+. + +..
T Consensus 151 ~~~~~l~~~~~dg~-v~vwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~~~d~~--~-----~~~ 220 (814)
T 3mkq_A 151 KDPSTFASGCLDRT-VKVWSLGQST-PNFTLTTGQERGVNYVDYYPLPDKP-YMITASDDLTIKIWDYQ--T-----KSC 220 (814)
T ss_dssp TEEEEEEEEETTSE-EEEEETTCSS-CSEEEECCCTTCCCEEEECCSTTCC-EEEEECTTSEEEEEETT--T-----TEE
T ss_pred CCCCEEEEEeCCCe-EEEEECCCCc-ceeEEecCCCCCEEEEEEEECCCCC-EEEEEeCCCEEEEEECC--C-----CcE
Confidence 67889999999998 9999998744 45555444 48999999999 888 99999999999999998 3 222
Q ss_pred ceeeeeCCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 301 PMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 301 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
...+.+|...|.+++|+|+++.+++++.||.|++|++
T Consensus 221 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~ 257 (814)
T 3mkq_A 221 VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNS 257 (814)
T ss_dssp EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEET
T ss_pred EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 4466779999999999999999999999999999985
No 96
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=9.5e-34 Score=248.97 Aligned_cols=276 Identities=16% Similarity=0.175 Sum_probs=218.8
Q ss_pred ceeeee-CCCceeEEEEe-cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecC--CCCcccCcC
Q 038533 14 NSVTHE-SPYPLYAMAVC-GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDP--NSSSRKSSS 89 (337)
Q Consensus 14 ~~~~~~-~~~~v~~~~~s-~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~--~~~~~~~~~ 89 (337)
.+..+. |..+|.+++|+ +.+|++|+. ||.|++|+++........ .+|...|.+++|++ ++.
T Consensus 154 ~~~~~~~h~~~V~~l~~~~~~~l~s~s~----dg~i~vwd~~~~~~~~~~-----~~h~~~v~~l~~~~~~~~~------ 218 (464)
T 3v7d_B 154 FLLQLSGHDGGVWALKYAHGGILVSGST----DRTVRVWDIKKGCCTHVF-----EGHNSTVRCLDIVEYKNIK------ 218 (464)
T ss_dssp EEEEECCCSSCEEEEEECSTTEEEEEET----TSCEEEEETTTTEEEEEE-----CCCSSCEEEEEEEESSSCE------
T ss_pred EEEEEeCCCcCEEEEEEcCCCEEEEEeC----CCCEEEEECCCCcEEEEE-----CCCCCccEEEEEecCCCCC------
Confidence 344444 68999999999 669999997 999999998765433332 67999999999984 555
Q ss_pred CccEEEEeC-C-eEEEEecCCCCcc---------------------ceeeecCCCCCcccCCeeEEEeecCCCCeEEEee
Q 038533 90 NRHLLASSG-D-FLRLWDVGDSSIE---------------------PVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCS 146 (337)
Q Consensus 90 ~~~~l~~~~-~-~v~vw~~~~~~~~---------------------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~ 146 (337)
++++++ | .|++||+.+.... ....+.+|. ..|.++. + +++++++|+
T Consensus 219 ---~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~--~-~~~~l~~~~ 287 (464)
T 3v7d_B 219 ---YIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHM-----ASVRTVS--G-HGNIVVSGS 287 (464)
T ss_dssp ---EEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCS-----SCEEEEE--E-ETTEEEEEE
T ss_pred ---EEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCcc-----ceEEEEc--C-CCCEEEEEe
Confidence 777777 5 9999999876421 244566776 7888774 4 679999999
Q ss_pred CCCcEEEEeCCCccchhhhhccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCC
Q 038533 147 IDTTCTIWDIEKGVVETQLIAHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQD 225 (337)
Q Consensus 147 ~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 225 (337)
.||.|++||+++++.+..+.+|...|.+++|+ +++.+++|+.||.|++||+++++....+ ..|...+.++.|+
T Consensus 288 ~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~---~~h~~~v~~~~~~--- 361 (464)
T 3v7d_B 288 YDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTL---QGHTALVGLLRLS--- 361 (464)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEE---CCCSSCEEEEEEC---
T ss_pred CCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEE---eCCCCcEEEEEEc---
Confidence 99999999999999999999999999999999 7899999999999999999988744433 3477899999995
Q ss_pred CcEEEEEEecCCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCce-ee
Q 038533 226 LRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPM-SM 304 (337)
Q Consensus 226 ~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-~~ 304 (337)
+.+|++++.|+. |++||+++.. ..... .+...+..++|+|++. ++++|+ ||.|++||++.++ ... ..
T Consensus 362 ~~~l~s~s~dg~-v~vwd~~~~~-~~~~~-~~~~~~~~~~~~~~~~-~l~~~~-dg~i~iwd~~~g~-------~~~~~~ 429 (464)
T 3v7d_B 362 DKFLVSAAADGS-IRGWDANDYS-RKFSY-HHTNLSAITTFYVSDN-ILVSGS-ENQFNIYNLRSGK-------LVHANI 429 (464)
T ss_dssp SSEEEEEETTSE-EEEEETTTCC-EEEEE-ECTTCCCEEEEEECSS-EEEEEE-TTEEEEEETTTCC-------EEESCT
T ss_pred CCEEEEEeCCCc-EEEEECCCCc-eeeee-cCCCCccEEEEEeCCC-EEEEec-CCeEEEEECCCCc-------EEehhh
Confidence 589999999998 9999999843 33333 3566788899999998 999988 9999999999332 111 24
Q ss_pred eeCCCceeEEEEccCCCceEE-EEcCCcEEEE
Q 038533 305 YSAGSEINQLQWSPAQPDWLA-IAFSNKMQLL 335 (337)
Q Consensus 305 ~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~iw 335 (337)
..|...|.+++|++ ..+++ ++.||.+.+|
T Consensus 430 ~~~~~~v~~v~~~~--~~l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 430 LKDADQIWSVNFKG--KTLVAAVEKDGQSFLE 459 (464)
T ss_dssp TTTCSEEEEEEEET--TEEEEEEEETTEEEEE
T ss_pred ccCCCcEEEEEecC--CEEEEEEEeCCeEEEE
Confidence 56889999999983 34554 4566665554
No 97
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-33 Score=243.79 Aligned_cols=233 Identities=22% Similarity=0.358 Sum_probs=197.0
Q ss_pred CeEEEecCCCCcccCcCCccEEEEeCC-eEEEEecCCCCccceeeecC-CCCCcccCCeeEEEeecCCCCeEEEeeCCCc
Q 038533 73 PTKLMFDPNSSSRKSSSNRHLLASSGD-FLRLWDVGDSSIEPVAVLNN-SKSSEFCAPLTSFDWNEIEPKRIGTCSIDTT 150 (337)
Q Consensus 73 i~~i~~~~~~~~~~~~~~~~~l~~~~~-~v~vw~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~ 150 (337)
+.++.|++ +. +++++.+ .|++||+.+++ ....+.. |. ..|.+++|+| ++++|++|+.||.
T Consensus 96 ~~~~~~s~-~~---------l~~~~~d~~v~lw~~~~~~--~~~~~~~~~~-----~~v~~v~~s~-~~~~l~~~~~dg~ 157 (401)
T 4aez_A 96 LNLLDWSN-LN---------VVAVALERNVYVWNADSGS--VSALAETDES-----TYVASVKWSH-DGSFLSVGLGNGL 157 (401)
T ss_dssp CBCEEECT-TS---------EEEEEETTEEEEEETTTCC--EEEEEECCTT-----CCEEEEEECT-TSSEEEEEETTSC
T ss_pred EEEEeecC-CC---------EEEEECCCeEEEeeCCCCc--EeEeeecCCC-----CCEEEEEECC-CCCEEEEECCCCe
Confidence 45577775 33 7776667 99999999984 4444443 55 8899999999 9999999999999
Q ss_pred EEEEeCCCccchhhhhccCCceeEEEeCCCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEE
Q 038533 151 CTIWDIEKGVVETQLIAHDKEVYDICWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMA 230 (337)
Q Consensus 151 i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 230 (337)
|++||+++++.+..+.+|...|.+++|+ ++.+++++.||.|++||++.......... .|...+.+++|+| ++.+|+
T Consensus 158 i~iwd~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~ 233 (401)
T 4aez_A 158 VDIYDVESQTKLRTMAGHQARVGCLSWN-RHVLSSGSRSGAIHHHDVRIANHQIGTLQ--GHSSEVCGLAWRS-DGLQLA 233 (401)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEEE-TTEEEEEETTSEEEEEETTSSSCEEEEEE--CCSSCEEEEEECT-TSSEEE
T ss_pred EEEEECcCCeEEEEecCCCCceEEEEEC-CCEEEEEcCCCCEEEEecccCcceeeEEc--CCCCCeeEEEEcC-CCCEEE
Confidence 9999999999999999999999999995 67999999999999999996554333333 3778999999999 999999
Q ss_pred EEEecCCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEc--CCCcEEEEeCCCCCCCCCCCCCceeeeeCC
Q 038533 231 TILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVG--DDSQAFIWELPLPPVAGPNGIDPMSMYSAG 308 (337)
Q Consensus 231 ~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~ 308 (337)
+++.|+. |++||+++ ..++..+..|...|.+++|+|++..++++++ .|+.|++||+..+. +.....+.
T Consensus 234 s~~~d~~-v~iwd~~~-~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~--------~~~~~~~~ 303 (401)
T 4aez_A 234 SGGNDNV-VQIWDARS-SIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA--------RVNTVDAG 303 (401)
T ss_dssp EEETTSC-EEEEETTC-SSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC--------EEEEEECS
T ss_pred EEeCCCe-EEEccCCC-CCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC--------EEEEEeCC
Confidence 9999999 99999998 6677888889999999999998876888876 79999999998222 44455678
Q ss_pred CceeEEEEccCCCceEEEE--cCCcEEEEeC
Q 038533 309 SEINQLQWSPAQPDWLAIA--FSNKMQLLKV 337 (337)
Q Consensus 309 ~~v~~~~~~~~~~~l~~~~--~d~~i~iw~l 337 (337)
..|.+++|+|+++.+++++ .||.|++|++
T Consensus 304 ~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~ 334 (401)
T 4aez_A 304 SQVTSLIWSPHSKEIMSTHGFPDNNLSIWSY 334 (401)
T ss_dssp SCEEEEEECSSSSEEEEEECTTTCEEEEEEE
T ss_pred CcEEEEEECCCCCeEEEEeecCCCcEEEEec
Confidence 8999999999999888865 7999999984
No 98
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.3e-34 Score=252.31 Aligned_cols=245 Identities=15% Similarity=0.182 Sum_probs=186.7
Q ss_pred CCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEE
Q 038533 67 FDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGT 144 (337)
Q Consensus 67 ~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 144 (337)
..|...|++|+|+|... .+||+|+ | .|+|||+.+++......+.+|. ..|++++|+|.++++|++
T Consensus 116 ~~~~~~V~~l~~~P~~~--------~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~-----~~V~~l~f~p~~~~~l~s 182 (435)
T 4e54_B 116 APFDRRATSLAWHPTHP--------STVAVGSKGGDIMLWNFGIKDKPTFIKGIGAG-----GSITGLKFNPLNTNQFYA 182 (435)
T ss_dssp EECSSCEEEEEECSSCT--------TCEEEEETTSCEEEECSSCCSCCEEECCCSSS-----CCCCEEEECSSCTTEEEE
T ss_pred CCCCCCEEEEEEeCCCC--------CEEEEEeCCCEEEEEECCCCCceeEEEccCCC-----CCEEEEEEeCCCCCEEEE
Confidence 46788999999999654 4899987 5 9999999988655566677888 999999999867899999
Q ss_pred eeCCCcEEEEeCCCccchhhhh--ccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEe
Q 038533 145 CSIDTTCTIWDIEKGVVETQLI--AHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAW 221 (337)
Q Consensus 145 ~~~dg~i~v~d~~~~~~~~~~~--~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~ 221 (337)
|+.||+|++||++++....... .+...+.+++|+ ++++|++|+.||.|++||++.... .....|...|.+++|
T Consensus 183 ~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~----~~~~~h~~~v~~v~~ 258 (435)
T 4e54_B 183 SSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKEL----WNLRMHKKKVTHVAL 258 (435)
T ss_dssp ECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBC----CCSBCCSSCEEEEEE
T ss_pred EeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCccee----EEEecccceEEeeee
Confidence 9999999999998765332222 334567889999 789999999999999999976432 223357889999999
Q ss_pred ecCCCcEEEEEEecCCEEEEEECCCCCC--CeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCC
Q 038533 222 NKQDLRYMATILMDSNKVVILDIRSPTL--PVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGI 299 (337)
Q Consensus 222 ~~~~~~~l~~~~~d~~~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 299 (337)
+|....+|++++.|+. |++||+++... .+....+|...|++++|+|++. +|++++.||.|++||+....
T Consensus 259 ~p~~~~~~~s~s~d~~-v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~-~l~s~~~D~~i~iwd~~~~~------- 329 (435)
T 4e54_B 259 NPCCDWFLATASVDQT-VKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGA-RLLTTDQKSEIRVYSASQWD------- 329 (435)
T ss_dssp CTTCSSEEEEEETTSB-CCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSS-EEEEEESSSCEEEEESSSSS-------
T ss_pred cCCCceEEEEecCcce-eeEEecccccccceEEEeeeccccccceeECCCCC-eeEEEcCCCEEEEEECCCCc-------
Confidence 9944557889999998 99999987442 2233457899999999999999 99999999999999998322
Q ss_pred CceeeeeCC------CceeEEEEccCCCceEEEE------------cCCcEEEEeC
Q 038533 300 DPMSMYSAG------SEINQLQWSPAQPDWLAIA------------FSNKMQLLKV 337 (337)
Q Consensus 300 ~~~~~~~~~------~~v~~~~~~~~~~~l~~~~------------~d~~i~iw~l 337 (337)
.+..+..|. ..+....|+|++..++++. .++.|++|++
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~ 385 (435)
T 4e54_B 330 CPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDG 385 (435)
T ss_dssp SEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECS
T ss_pred cceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEEC
Confidence 122222222 1234456666665555443 2357999974
No 99
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=4.5e-34 Score=240.93 Aligned_cols=245 Identities=13% Similarity=0.104 Sum_probs=199.5
Q ss_pred CCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCC-ccceeeecCCCCCcccCCeeEEEeecCCCC-eE
Q 038533 67 FDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSS-IEPVAVLNNSKSSEFCAPLTSFDWNEIEPK-RI 142 (337)
Q Consensus 67 ~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l 142 (337)
.+|.+.|.+++|+|++. +|++++ + .|++|++.+++ ......+..|. ..|.+++|+| +++ +|
T Consensus 8 ~~h~~~v~~~~~s~~~~---------~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~-~~~~~l 72 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKS---------LLLITSWDGSLTVYKFDIQAKNVDLLQSLRYK-----HPLLCCNFID-NTDLQI 72 (342)
T ss_dssp SCCSSCEEEEEEEGGGT---------EEEEEETTSEEEEEEEETTTTEEEEEEEEECS-----SCEEEEEEEE-SSSEEE
T ss_pred cCCCCcEEEEEEcCCCC---------EEEEEcCCCeEEEEEeCCCCccccceeeeecC-----CceEEEEECC-CCCcEE
Confidence 58999999999999998 777776 5 99999998874 11234455676 8999999999 899 99
Q ss_pred EEeeCCCcEEEEeC-CCccchhhhhc--cCCceeEEEeCCCcEEEEEcCCCeEEEEECCC---------CCCceeeecCC
Q 038533 143 GTCSIDTTCTIWDI-EKGVVETQLIA--HDKEVYDICWGEARVFASVSADGSVRIFDLRD---------KEHSTIIYESP 210 (337)
Q Consensus 143 ~~~~~dg~i~v~d~-~~~~~~~~~~~--~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~---------~~~~~~~~~~~ 210 (337)
++|+.||.|++||+ ++++. ..+.+ |...|.+++|++++.+++++.|+.|++||+++ .+....+
T Consensus 73 ~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~---- 147 (342)
T 1yfq_A 73 YVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT---- 147 (342)
T ss_dssp EEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSS----
T ss_pred EEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEE----
Confidence 99999999999999 77754 66677 99999999999888999999999999999987 5433322
Q ss_pred CCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCC-CCCC-eEEeecccceeeEEEeCC-CCCCeEEEEcCCCcEEEEe
Q 038533 211 QPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRS-PTLP-VAELERHRACVNAIAWAP-QSRRHICSVGDDSQAFIWE 287 (337)
Q Consensus 211 ~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~-~~~~-~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~iw~ 287 (337)
.+...+.+++|+| ++ +++++.++. |++||++. .... ......|...+.+++|+| ++. ++++++.||.|++|+
T Consensus 148 ~~~~~v~~~~~~~-~~--l~~~~~d~~-i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~-~l~~~~~dg~i~i~~ 222 (342)
T 1yfq_A 148 KVKNKIFTMDTNS-SR--LIVGMNNSQ-VQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQE-GYACSSIDGRVAVEF 222 (342)
T ss_dssp SSCCCEEEEEECS-SE--EEEEESTTE-EEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGC-EEEEEETTSEEEEEE
T ss_pred eeCCceEEEEecC-Cc--EEEEeCCCe-EEEEECCccccccceeeecCCCCceeEEEECCCCCC-EEEEEecCCcEEEEE
Confidence 2568999999987 54 889999988 99999997 4433 334456788999999999 998 999999999999999
Q ss_pred CCCCCCCCCCCCCceeeeeCCC---------ceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 288 LPLPPVAGPNGIDPMSMYSAGS---------EINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
++...... .......+..|.. .|.+++|+|++++|++++.||.|++|++
T Consensus 223 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~ 280 (342)
T 1yfq_A 223 FDDQGDDY-NSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNL 280 (342)
T ss_dssp CCTTCCST-TCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEET
T ss_pred EcCCCccc-ccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcC
Confidence 98320000 0122345556654 9999999999999999999999999985
No 100
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.2e-34 Score=253.30 Aligned_cols=250 Identities=11% Similarity=0.173 Sum_probs=193.5
Q ss_pred CCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCC---------ccceeeecCCCCC-------cccCC
Q 038533 67 FDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSS---------IEPVAVLNNSKSS-------EFCAP 128 (337)
Q Consensus 67 ~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~---------~~~~~~~~~~~~~-------~~~~~ 128 (337)
..+.+.|.+++|+|++. +||+|+ | .|+||++.+++ .+....+.+|..+ .....
T Consensus 25 ~~~~~~V~~v~~s~~g~---------~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~ 95 (447)
T 3dw8_B 25 VAEADIISTVEFNHSGE---------LLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEK 95 (447)
T ss_dssp CCGGGSEEEEEECSSSS---------EEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCC
T ss_pred ccccCcEEEEEECCCCC---------EEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCc
Confidence 46788999999999998 899887 5 99999998763 1246677777411 01156
Q ss_pred eeEEEeecCCC--CeEEEeeCCCcEEEEeCCCccch---------------------------------------hh-hh
Q 038533 129 LTSFDWNEIEP--KRIGTCSIDTTCTIWDIEKGVVE---------------------------------------TQ-LI 166 (337)
Q Consensus 129 i~~~~~~~~~~--~~l~~~~~dg~i~v~d~~~~~~~---------------------------------------~~-~~ 166 (337)
|++++|+| ++ ..|++++.|+.|++||+.+++.. .. ..
T Consensus 96 V~~l~~~~-~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (447)
T 3dw8_B 96 INKIRWLP-QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFAN 174 (447)
T ss_dssp CCEEEECC-CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECS
T ss_pred eEEEEEcC-CCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEecc
Confidence 99999999 76 79999999999999998764431 11 35
Q ss_pred ccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeee-----cCCCCCCCceEEEeecCCC-cEEEEEEecCCEE
Q 038533 167 AHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIY-----ESPQPDTPLLRLAWNKQDL-RYMATILMDSNKV 239 (337)
Q Consensus 167 ~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-----~~~~~~~~i~~~~~~~~~~-~~l~~~~~d~~~i 239 (337)
+|...|.+++|+ ++++|++| .|+.|++||++......... ....|...|.+++|+| ++ .+|++++.|+. |
T Consensus 175 ~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~~~dg~-i 251 (447)
T 3dw8_B 175 AHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHP-NSCNTFVYSSSKGT-I 251 (447)
T ss_dssp CCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECS-SCTTEEEEEETTSC-E
T ss_pred CCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECC-CCCcEEEEEeCCCe-E
Confidence 799999999999 78899998 79999999998543222211 1234778999999999 76 99999999999 9
Q ss_pred EEEECCCCCC---CeEEeecccc------------eeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceee
Q 038533 240 VILDIRSPTL---PVAELERHRA------------CVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSM 304 (337)
Q Consensus 240 ~i~d~~~~~~---~~~~~~~~~~------------~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~ 304 (337)
++||+++... .+..+..|.. .|.+++|+|+++ +|++++. +.|++||++ ...+ ....+
T Consensus 252 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~-~~v~iwd~~--~~~~----~~~~~ 323 (447)
T 3dw8_B 252 RLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR-YMMTRDY-LSVKVWDLN--MENR----PVETY 323 (447)
T ss_dssp EEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS-EEEEEES-SEEEEEETT--CCSS----CSCCE
T ss_pred EEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCC-EEEEeeC-CeEEEEeCC--CCcc----cccee
Confidence 9999998432 1677877775 899999999999 9999998 999999998 3111 23344
Q ss_pred eeCCCc---------------eeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 305 YSAGSE---------------INQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 305 ~~~~~~---------------v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
..|... +..++|+|++++|++++.||.|++|++
T Consensus 324 ~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~ 371 (447)
T 3dw8_B 324 QVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDR 371 (447)
T ss_dssp ESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEET
T ss_pred eccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEc
Confidence 455421 334999999999999999999999985
No 101
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=3.6e-34 Score=243.55 Aligned_cols=247 Identities=10% Similarity=0.111 Sum_probs=192.7
Q ss_pred CCCceeEEEEecceEEEeee-------eccCcceEEEEEecCCCcceecCC----CcCCCCCCCCeEEEecCCCCcccCc
Q 038533 20 SPYPLYAMAVCGQRIAVGSF-------IEDYTNRVDVVSFEPESLSIKTHP----SLSFDHPYPPTKLMFDPNSSSRKSS 88 (337)
Q Consensus 20 ~~~~v~~~~~s~~~la~g~~-------~~~~d~~i~i~~~~~~~~~~~~~~----~~~~~~~~~i~~i~~~~~~~~~~~~ 88 (337)
++..|.+++++++.+++|.. ....|+.+++|+++.......... .....+...+.+++|+||++
T Consensus 72 ~~~~v~s~~~~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~----- 146 (365)
T 4h5i_A 72 NDDSPTAIDASKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGT----- 146 (365)
T ss_dssp TSCCCCEEEEETTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSS-----
T ss_pred CCCceEEEEeCCCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCC-----
Confidence 45678899988777777654 123488999999987655432211 11234556789999999998
Q ss_pred CCccEEEE--eC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchh-
Q 038533 89 SNRHLLAS--SG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVET- 163 (337)
Q Consensus 89 ~~~~~l~~--~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~- 163 (337)
++++ ++ | +|+|||+.++ +++..+. |. ..|.+++|+| +++++++++.+ .+++|+..+++.+.
T Consensus 147 ----~la~as~~~d~~i~iwd~~~~--~~~~~~~-~~-----~~V~~v~fsp-dg~~l~s~s~~-~~~~~~~~~~~~~~~ 212 (365)
T 4h5i_A 147 ----VAAIASSKVPAIMRIIDPSDL--TEKFEIE-TR-----GEVKDLHFST-DGKVVAYITGS-SLEVISTVTGSCIAR 212 (365)
T ss_dssp ----CEEEEESCSSCEEEEEETTTT--EEEEEEE-CS-----SCCCEEEECT-TSSEEEEECSS-CEEEEETTTCCEEEE
T ss_pred ----EEEEEECCCCCEEEEeECCCC--cEEEEeC-CC-----CceEEEEEcc-CCceEEeccce-eEEEEEeccCcceee
Confidence 6654 43 4 9999999998 5666665 44 7899999999 99999999855 56677766666443
Q ss_pred -hhhccCCceeEEEeC-CCcEEEEEcCCC----eEEEEECCCCCCce-eeecCCCCCCCceEEEeecCCCcEEEEEEecC
Q 038533 164 -QLIAHDKEVYDICWG-EARVFASVSADG----SVRIFDLRDKEHST-IIYESPQPDTPLLRLAWNKQDLRYMATILMDS 236 (337)
Q Consensus 164 -~~~~~~~~v~~~~~~-~~~~l~~~~~dg----~i~iwd~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~ 236 (337)
....|...|.+++|+ ++..+++++.|+ .+++||+....... .......|...|++++|+| ++++|++|+.|+
T Consensus 213 ~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Sp-dg~~lasgs~D~ 291 (365)
T 4h5i_A 213 KTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDM-KGELAVLASNDN 291 (365)
T ss_dssp ECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECT-TSCEEEEEETTS
T ss_pred eecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECC-CCCceEEEcCCC
Confidence 345688899999999 789999998887 68889987765322 1222334678999999999 999999999999
Q ss_pred CEEEEEECCCCCCCeEEe-ecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCC
Q 038533 237 NKVVILDIRSPTLPVAEL-ERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 237 ~~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 289 (337)
. |+|||+++ .+++..+ .+|..+|++++|+|+++ +|++|+.|++|+||+++
T Consensus 292 ~-V~iwd~~~-~~~~~~~~~gH~~~V~~v~fSpdg~-~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 292 S-IALVKLKD-LSMSKIFKQAHSFAITEVTISPDST-YVASVSAANTIHIIKLP 342 (365)
T ss_dssp C-EEEEETTT-TEEEEEETTSSSSCEEEEEECTTSC-EEEEEETTSEEEEEECC
T ss_pred E-EEEEECCC-CcEEEEecCcccCCEEEEEECCCCC-EEEEEeCCCeEEEEEcC
Confidence 9 99999998 5567664 78999999999999999 99999999999999997
No 102
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-34 Score=249.43 Aligned_cols=260 Identities=8% Similarity=0.016 Sum_probs=201.8
Q ss_pred CCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEe
Q 038533 20 SPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASS 97 (337)
Q Consensus 20 ~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~ 97 (337)
....|.+++|+ |+++|+++. |++|+ +. .... .+ .+|...|.+++|+|++.
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~----D~TV~--d~--~~~~-----~l-~gh~~~v~~V~FsPdg~-------------- 65 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFP----DISIG--QP--KYAK-----DI-NCNSKNLFHVKEFPLEF-------------- 65 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSS----SEEEE--EE--CCCS-----CC-SSBGGGTEEEEEECCCC--------------
T ss_pred hhccEEEEEECCCCCEEEEEcC----Cceee--cc--cccc-----ee-cCCCccEEEEEECCCCC--------------
Confidence 36789999999 999999997 99999 42 2211 22 58999999999999885
Q ss_pred CCeEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCC-----ce
Q 038533 98 GDFLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDK-----EV 172 (337)
Q Consensus 98 ~~~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~-----~v 172 (337)
.+.+.+|+.+.. ....+ .|. ..|.+++|+| ++++||+++.||.|++||.+. .+..+. |.. .+
T Consensus 66 ~~~~~~~~~~~~---~~~~~-~~~-----~~V~~vawSP-dG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv 132 (588)
T 2j04_A 66 ENKLDFELAQQN---GLLNS-QPV-----CYPRVCKPSP-IDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTY 132 (588)
T ss_dssp CCTTTTSCCCSS---CSSTT-SCS-----CCEEEEEECS-SSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCE
T ss_pred cceEEEEeCCCc---eEeec-CCC-----CcEEEEEECC-CCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccE
Confidence 114444443322 22222 334 8899999999 999999999999999999544 555556 554 49
Q ss_pred eEEEeC-CCcEEEEEcCCCeEEEEECCCCCC-------ceeee-cCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEE
Q 038533 173 YDICWG-EARVFASVSADGSVRIFDLRDKEH-------STIIY-ESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILD 243 (337)
Q Consensus 173 ~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~-------~~~~~-~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d 243 (337)
.+++|+ ++++|++|+.||+|++||+.++.. ...+. ...+|...|.+++|+| ++ +++++.|+. |++||
T Consensus 133 ~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSP-dg--Laass~D~t-VrlWd 208 (588)
T 2j04_A 133 HCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYE-DV--LVAALSNNS-VFSMT 208 (588)
T ss_dssp EEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEET-TE--EEEEETTCC-EEEEC
T ss_pred EEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcC-Cc--EEEEeCCCe-EEEEE
Confidence 999999 899999999999999999998753 12221 1234778999999999 77 888888998 99999
Q ss_pred CCCCCC--CeEEe-ecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCc-eeeeeCCCceeEEEE--c
Q 038533 244 IRSPTL--PVAEL-ERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDP-MSMYSAGSEINQLQW--S 317 (337)
Q Consensus 244 ~~~~~~--~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~--~ 317 (337)
+..... ...++ .+|...|.+++|+ +. .||+++ ++.|++||+. . ... ....+|...|.+++| +
T Consensus 209 ~~~~~~~~~~~tL~~~h~~~V~svaFs--g~-~LASa~-~~tIkLWd~~--~------~~~~~~~~gh~~~V~~va~~~s 276 (588)
T 2j04_A 209 VSASSHQPVSRMIQNASRRKITDLKIV--DY-KVVLTC-PGYVHKIDLK--N------YSISSLKTGSLENFHIIPLNHE 276 (588)
T ss_dssp CCSSSSCCCEEEEECCCSSCCCCEEEE--TT-EEEEEC-SSEEEEEETT--T------TEEEEEECSCCSCCCEEEETTC
T ss_pred CCCCccccceeeecccccCcEEEEEEE--CC-EEEEEe-CCeEEEEECC--C------CeEEEEEcCCCceEEEEEeeeC
Confidence 987442 23456 4788899999999 55 899887 6999999998 3 123 333389999999999 9
Q ss_pred cCCCceEEEEcCCcEEEEeC
Q 038533 318 PAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 318 ~~~~~l~~~~~d~~i~iw~l 337 (337)
|++..+++++.||+ ++|..
T Consensus 277 ~d~~~La~a~edG~-klw~~ 295 (588)
T 2j04_A 277 KESTILLMSNKTSY-KVLLE 295 (588)
T ss_dssp SSCEEEEECSSCEE-EEEES
T ss_pred CCCCEEEEEcCCCC-EEEee
Confidence 99987888888999 99974
No 103
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=6.7e-33 Score=234.97 Aligned_cols=279 Identities=11% Similarity=0.136 Sum_probs=203.9
Q ss_pred eCCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEE-E
Q 038533 19 ESPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLL-A 95 (337)
Q Consensus 19 ~~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l-~ 95 (337)
.|..+|++++|+ +++||+|+ +..++||+.+........ +...+..+++.+++. ++ +
T Consensus 17 ~h~~~V~~v~fs~dg~~la~g~-----~~~~~iw~~~~~~~~~~~-------~~~~~~~~~~~~~~~---------~~~~ 75 (355)
T 3vu4_A 17 HVSNPVTDYEFNQDQSCLILST-----LKSFEIYNVHPVAHIMSQ-------EMRHLSKVRMLHRTN---------YVAF 75 (355)
T ss_dssp --CCCCCEEEECTTSSEEEEEC-----SSEEEEEEETTEEEEEEE-------ECSCCCEEEECTTSS---------EEEE
T ss_pred cCCCceEEEEECCCCCEEEEEc-----CCEEEEEecCCcceeeee-------ecCCeEEEEEcCCCC---------EEEE
Confidence 468899999999 89999988 556899998754333222 122588899998887 55 4
Q ss_pred EeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCc-cchhhhhccCCce
Q 038533 96 SSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKG-VVETQLIAHDKEV 172 (337)
Q Consensus 96 ~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~-~~~~~~~~~~~~v 172 (337)
+++ + +|++||+.++ +.+..+. +. .+|.+++|++ +.++++. |+.|++||+.++ +.+..+.. +.
T Consensus 76 ~~~~d~~v~iWd~~~~--~~~~~~~-~~-----~~v~~v~~~~---~~~~~~~-~~~i~i~d~~~~~~~~~~~~~---~~ 140 (355)
T 3vu4_A 76 VTGVKEVVHIWDDVKK--QDVSRIK-VD-----APVKDLFLSR---EFIVVSY-GDVISVFKFGNPWKRITDDIR---FG 140 (355)
T ss_dssp ECSSTTEEEEEETTTT--EEEEEEE-CS-----SCEEEEEECS---SEEEEEE-TTEEEEEESSTTCCBSSCCEE---EE
T ss_pred EECCccEEEEEECCCC--cEEEEEE-CC-----CceEEEEEcC---CEEEEEE-cCEEEEEECCCCceeeEEecc---CC
Confidence 444 4 9999999998 5666665 33 7899999976 3455543 789999999988 66666654 33
Q ss_pred eEEEeCCCcEEEE--EcCCCeEEEEECCCCCCc------------ee-eecCCCCCCCceEEEeecCCCcEEEEEEecCC
Q 038533 173 YDICWGEARVFAS--VSADGSVRIFDLRDKEHS------------TI-IYESPQPDTPLLRLAWNKQDLRYMATILMDSN 237 (337)
Q Consensus 173 ~~~~~~~~~~l~~--~~~dg~i~iwd~~~~~~~------------~~-~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~ 237 (337)
..+++++ ..+++ |+.||.|++||+++++.. .. ......|...|.+++|+| ++.+|++++.|+.
T Consensus 141 ~~~~~s~-~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~-~g~~l~s~s~d~~ 218 (355)
T 3vu4_A 141 GVCEFSN-GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR-KSDMVATCSQDGT 218 (355)
T ss_dssp EEEEEET-TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECT-TSSEEEEEETTCS
T ss_pred ceEEEEc-cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECC-CCCEEEEEeCCCC
Confidence 3444445 56665 588999999999976410 00 222235889999999999 9999999999983
Q ss_pred EEEEEECCCCCCCeEEee-c-ccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCc-------------e
Q 038533 238 KVVILDIRSPTLPVAELE-R-HRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDP-------------M 302 (337)
Q Consensus 238 ~i~i~d~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-------------~ 302 (337)
.|++||+++ ++++..+. + |...|.+++|+|+++ +|++++.|+.|++||++.+...+...... .
T Consensus 219 ~v~iwd~~~-~~~~~~~~~g~h~~~v~~~~~s~~~~-~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (355)
T 3vu4_A 219 IIRVFKTED-GVLVREFRRGLDRADVVDMKWSTDGS-KLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLC 296 (355)
T ss_dssp EEEEEETTT-CCEEEEEECTTCCSCEEEEEECTTSC-EEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSE
T ss_pred EEEEEECCC-CcEEEEEEcCCCCCcEEEEEECCCCC-EEEEEECCCEEEEEEccCCCCcccccccceeecccccccccee
Confidence 399999998 66778887 5 999999999999999 99999999999999998433221000000 0
Q ss_pred ---eeeeCCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 303 ---SMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 303 ---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
...........++|+|+++.+++++.||.+++|++
T Consensus 297 ~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~ 334 (355)
T 3vu4_A 297 NFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKV 334 (355)
T ss_dssp EEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEE
T ss_pred EEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence 00011233477999999999999999999999974
No 104
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-34 Score=252.90 Aligned_cols=249 Identities=11% Similarity=0.159 Sum_probs=192.3
Q ss_pred CCCCCCCeEEEecC-CCCcccCcCCccEEEEeC-C-eEEEEecCC---CC-ccceeeecCCCCCcccCCeeEEEeecCCC
Q 038533 67 FDHPYPPTKLMFDP-NSSSRKSSSNRHLLASSG-D-FLRLWDVGD---SS-IEPVAVLNNSKSSEFCAPLTSFDWNEIEP 139 (337)
Q Consensus 67 ~~~~~~i~~i~~~~-~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~---~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 139 (337)
.+|.+.|++++|+| ++. +|++|+ | .|++||+.+ +. .+....+ .|. ..|.+++|+| ++
T Consensus 60 ~~h~~~V~~~~~s~~~~~---------~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~-----~~v~~~~~~~-~~ 123 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETP---------YLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCS-----STVTQITMIP-NF 123 (437)
T ss_dssp TTTTSCEEEEEEECSSSC---------EEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECS-----SCEEEEEECT-TS
T ss_pred cCCCCceEEEEECCCCCC---------EEEEecCCceEEEeECcccccCcccceeeec-cCC-----CCEEEEEEeC-CC
Confidence 67899999999999 888 888887 5 999999976 42 1223333 366 8999999999 99
Q ss_pred CeEEEeeCCCcEEEEeCC---Cccchhhhhc------------cCCceeEEE--eC-CCcEEEEEcCCCeEEEEECCCCC
Q 038533 140 KRIGTCSIDTTCTIWDIE---KGVVETQLIA------------HDKEVYDIC--WG-EARVFASVSADGSVRIFDLRDKE 201 (337)
Q Consensus 140 ~~l~~~~~dg~i~v~d~~---~~~~~~~~~~------------~~~~v~~~~--~~-~~~~l~~~~~dg~i~iwd~~~~~ 201 (337)
++|++|+.||.|++||++ +++.+..+.. +...+.++. ++ ++.++++++.||.|++||+++++
T Consensus 124 ~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 203 (437)
T 3gre_A 124 DAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLE 203 (437)
T ss_dssp SEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCC
T ss_pred CEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCe
Confidence 999999999999999995 4443332221 445566666 33 58899999999999999999988
Q ss_pred CceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEee-cccceeeEEEeC----CCCCCeEEE
Q 038533 202 HSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELE-RHRACVNAIAWA----PQSRRHICS 276 (337)
Q Consensus 202 ~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~----~~~~~~l~~ 276 (337)
....+.. ..|...|.+++|+| ++.+|++++.|+. |++||+++ ..++..+. .|..+|.+++|+ |++. +|++
T Consensus 204 ~~~~~~~-~~h~~~v~~~~~s~-~~~~l~s~~~dg~-i~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~s~~~~-~l~s 278 (437)
T 3gre_A 204 RLQIIEN-SPRHGAVSSICIDE-ECCVLILGTTRGI-IDIWDIRF-NVLIRSWSFGDHAPITHVEVCQFYGKNSV-IVVG 278 (437)
T ss_dssp EEEEEEC-CGGGCCEEEEEECT-TSCEEEEEETTSC-EEEEETTT-TEEEEEEBCTTCEEEEEEEECTTTCTTEE-EEEE
T ss_pred eeEEEcc-CCCCCceEEEEECC-CCCEEEEEcCCCe-EEEEEcCC-ccEEEEEecCCCCceEEEEeccccCCCcc-EEEE
Confidence 6555443 22568999999999 8999999999999 99999998 66677765 778899999665 4576 9999
Q ss_pred EcCCCcEEEEeCCCCCCCCCC---------------CC--Cceeeee--CCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 277 VGDDSQAFIWELPLPPVAGPN---------------GI--DPMSMYS--AGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 277 ~~~dg~i~iw~~~~~~~~~~~---------------~~--~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
|+.||.|++||++.+...... +. ....+.+ |...|.+++|+ +++.|++++.|+.|++|++
T Consensus 279 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~ 357 (437)
T 3gre_A 279 GSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSL 357 (437)
T ss_dssp ESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEET
T ss_pred EcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEEC
Confidence 999999999999833210000 00 0001122 77789999999 6678999999999999985
No 105
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-34 Score=265.44 Aligned_cols=248 Identities=17% Similarity=0.285 Sum_probs=207.4
Q ss_pred eeCCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCC--CCcccCcCCccE
Q 038533 18 HESPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPN--SSSRKSSSNRHL 93 (337)
Q Consensus 18 ~~~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~--~~~~~~~~~~~~ 93 (337)
..|.++|++++|+ +++|++|+. ||.|+||++......... .+ .+|.++|.+++|+|+ +. +
T Consensus 6 ~gH~~~V~~l~~s~dg~~latg~~----dg~I~vwd~~~~~~~~~~--~l-~~h~~~V~~l~~s~~~~~~---------~ 69 (753)
T 3jro_A 6 NAHNELIHDAVLDYYGKRLATCSS----DKTIKIFEVEGETHKLID--TL-TGHEGPVWRVDWAHPKFGT---------I 69 (753)
T ss_dssp --CCCCEEEECCCSSSCCEEEEET----TTEEEEEEEETTEEEEEE--EE-CCCSSCEEEEEECCTTSCS---------E
T ss_pred ccCcceeEEEEECCCCCeEEEEEC----CCcEEEEecCCCCCccce--ec-cCCcCceEEEEecCCCCCC---------E
Confidence 3578999999999 899999997 999999999855443332 22 689999999999988 76 8
Q ss_pred EEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCC--CCeEEEeeCCCcEEEEeCCCcc--chhhhhc
Q 038533 94 LASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIE--PKRIGTCSIDTTCTIWDIEKGV--VETQLIA 167 (337)
Q Consensus 94 l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~dg~i~v~d~~~~~--~~~~~~~ 167 (337)
|++|+ | .|++||+.+++......+.+|. ..|.+++|+| + ++.+++|+.||.|++||++++. ....+.+
T Consensus 70 l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~-----~~V~~v~~sp-~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~ 143 (753)
T 3jro_A 70 LASCSYDGKVLIWKEENGRWSQIAVHAVHS-----ASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA 143 (753)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCS-----SCEEEEEECC-GGGCSEEEEEETTSEEEEEECCSSSCCCCEEEEC
T ss_pred EEEEeCCCeEEEEECCCCcccccccccCCC-----CCeEEEEECC-CCCCCEEEEEeCCCcEEEEEeecCCCcceeEeec
Confidence 88877 5 9999999998555778888888 9999999999 7 8999999999999999998874 3345568
Q ss_pred cCCceeEEEeCC--------------CcEEEEEcCCCeEEEEECCCCCCc-eeeecCCCCCCCceEEEeecCC---CcEE
Q 038533 168 HDKEVYDICWGE--------------ARVFASVSADGSVRIFDLRDKEHS-TIIYESPQPDTPLLRLAWNKQD---LRYM 229 (337)
Q Consensus 168 ~~~~v~~~~~~~--------------~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~---~~~l 229 (337)
|...|.+++|++ +..+++|+.||.|++||+++.... ........|...|.+++|+| + +.+|
T Consensus 144 ~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp-~~~~~~~l 222 (753)
T 3jro_A 144 HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP-TVLLRSYL 222 (753)
T ss_dssp CSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC-CCSSSEEE
T ss_pred CCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEecc-CCCCCCEE
Confidence 899999999995 789999999999999999987543 22233345789999999999 7 8999
Q ss_pred EEEEecCCEEEEEECCCCCC----CeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCC
Q 038533 230 ATILMDSNKVVILDIRSPTL----PVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPL 290 (337)
Q Consensus 230 ~~~~~d~~~i~i~d~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 290 (337)
++++.|+. |++||+++... .......|...|++++|+|+++ +|++++.||.|++|++..
T Consensus 223 ~s~s~Dg~-I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~-~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 223 ASVSQDRT-CIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN-VLALSGGDNKVTLWKENL 285 (753)
T ss_dssp EEEESSSC-EEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTC-CEEEECSSSCEECCBCCS
T ss_pred EEEecCCE-EEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCC-EEEEEcCCCEEEEEecCC
Confidence 99999999 99999987431 2333455888999999999999 999999999999999983
No 106
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=5.9e-33 Score=240.84 Aligned_cols=235 Identities=17% Similarity=0.310 Sum_probs=198.7
Q ss_pred CCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEe
Q 038533 20 SPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASS 97 (337)
Q Consensus 20 ~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~ 97 (337)
|...|++++|+ +++||+|+. ||.|+||++......... .+|...+.++.|+ +. +|++|
T Consensus 146 ~~~~V~sv~fspdg~~lasgs~----Dg~v~iWd~~~~~~~~~~-----~~h~~~v~~~s~~--~~---------~l~sg 205 (420)
T 4gga_A 146 PGEYISSVAWIKEGNYLAVGTS----SAEVQLWDVQQQKRLRNM-----TSHSARVGSLSWN--SY---------ILSSG 205 (420)
T ss_dssp TTCCEEEEEECTTSSEEEEEET----TSCEEEEETTTTEEEEEE-----CCCSSCEEEEEEE--TT---------EEEEE
T ss_pred CCCcEEEEEECCCCCEEEEEEC----CCeEEEEEcCCCcEEEEE-----eCCCCceEEEeeC--CC---------EEEEE
Confidence 46789999999 899999997 999999998765543333 6899999988875 45 88887
Q ss_pred C-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccc----hhhhhccCCc
Q 038533 98 G-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVV----ETQLIAHDKE 171 (337)
Q Consensus 98 ~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~----~~~~~~~~~~ 171 (337)
+ + .+++||..... .....+.+|. ..+..+.|+| ++.++++++.|+.+++|+..+++. +.....|...
T Consensus 206 s~d~~i~~~d~~~~~-~~~~~~~~h~-----~~~~~~~~~~-~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~ 278 (420)
T 4gga_A 206 SRSGHIHHHDVRVAE-HHVATLSGHS-----QEVCGLRWAP-DGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGA 278 (420)
T ss_dssp ETTSEEEEEETTSSS-CEEEEEECCS-----SCEEEEEECT-TSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSC
T ss_pred eCCCceeEeeecccc-eeeEEecccc-----cceeeeeecC-CCCeeeeeeccccceEEeeccccccceeeeeecccCCc
Confidence 7 5 99999998764 5667788888 9999999999 999999999999999999987753 3455678899
Q ss_pred eeEEEeC--CCcEEEE--EcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEE--ecCCEEEEEECC
Q 038533 172 VYDICWG--EARVFAS--VSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATIL--MDSNKVVILDIR 245 (337)
Q Consensus 172 v~~~~~~--~~~~l~~--~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~--~d~~~i~i~d~~ 245 (337)
|.+++|+ ....+++ |+.|++|++||+++++....+.. ...+.++.|+| ++..+++++ .|+. |++||++
T Consensus 279 V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~----~~~v~~~~~~~-~~~~lv~~sg~~d~~-I~iwd~~ 352 (420)
T 4gga_A 279 VKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA----HSQVCSILWSP-HYKELISGHGFAQNQ-LVIWKYP 352 (420)
T ss_dssp EEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEEC----SSCEEEEEEET-TTTEEEEEECTTTCC-EEEEETT
T ss_pred eeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecc----ccceeeeeecC-CCCeEEEEEecCCCE-EEEEECC
Confidence 9999999 3566665 45799999999999886555543 36899999999 777777765 5777 9999999
Q ss_pred CCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCC
Q 038533 246 SPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 246 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 289 (337)
+ .+++..+.+|...|++++|+|+|+ +|++|+.|++|+|||+.
T Consensus 353 ~-~~~v~~l~gH~~~V~~l~~spdg~-~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 353 T-MAKVAELKGHTSRVLSLTMSPDGA-TVASAAADETLRLWRCF 394 (420)
T ss_dssp T-CCEEEEECCCSSCEEEEEECTTSS-CEEEEETTTEEEEECCS
T ss_pred C-CcEEEEEcCCCCCEEEEEEcCCCC-EEEEEecCCeEEEEECC
Confidence 8 678899999999999999999999 99999999999999998
No 107
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.5e-33 Score=240.29 Aligned_cols=239 Identities=15% Similarity=0.153 Sum_probs=189.0
Q ss_pred CCCCCCCeEEEecCCC-CcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEE
Q 038533 67 FDHPYPPTKLMFDPNS-SSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIG 143 (337)
Q Consensus 67 ~~~~~~i~~i~~~~~~-~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 143 (337)
.+|...|.+++|+|++ . +|++|+ | .|++||+.+++........+|. ..|.+++|+|.++++|+
T Consensus 70 ~~h~~~v~~~~~~~~~~~---------~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~~l~ 135 (383)
T 3ei3_B 70 SPFDRRVTSLEWHPTHPT---------TVAVGSKGGDIILWDYDVQNKTSFIQGMGPG-----DAITGMKFNQFNTNQLF 135 (383)
T ss_dssp CCCSSCEEEEEECSSCTT---------EEEEEEBTSCEEEEETTSTTCEEEECCCSTT-----CBEEEEEEETTEEEEEE
T ss_pred cCCCCCEEEEEECCCCCC---------EEEEEcCCCeEEEEeCCCcccceeeecCCcC-----CceeEEEeCCCCCCEEE
Confidence 6899999999999998 6 888887 5 9999999988543333344677 99999999985678999
Q ss_pred EeeCCCcEEEEeCCCccchhhhh---ccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEE
Q 038533 144 TCSIDTTCTIWDIEKGVVETQLI---AHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRL 219 (337)
Q Consensus 144 ~~~~dg~i~v~d~~~~~~~~~~~---~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~ 219 (337)
+++.|+.|++||+++ ..+..+. .|...|.+++|+ ++++|++++.|+.|++||++ ++....+ ..|...|.++
T Consensus 136 s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~---~~h~~~v~~~ 210 (383)
T 3ei3_B 136 VSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKE---KLHKAKVTHA 210 (383)
T ss_dssp EEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEE---ECSSSCEEEE
T ss_pred EEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEe---ccCCCcEEEE
Confidence 999999999999986 4344443 345789999999 78999999999999999995 3322222 2477899999
Q ss_pred EeecCCCc-EEEEEEecCCEEEEEECCCCC---CCeEEeecccceeeEEEeCC-CCCCeEEEEcCCCcEEEEeCCCCCCC
Q 038533 220 AWNKQDLR-YMATILMDSNKVVILDIRSPT---LPVAELERHRACVNAIAWAP-QSRRHICSVGDDSQAFIWELPLPPVA 294 (337)
Q Consensus 220 ~~~~~~~~-~l~~~~~d~~~i~i~d~~~~~---~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~iw~~~~~~~~ 294 (337)
+|+| ++. +|++++.|+. |++||+++.. .++..+ .|...|.+++|+| ++. +|++++.|+.|++||++..+.
T Consensus 211 ~~~~-~~~~~l~s~~~d~~-i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~-~l~~~~~d~~i~iwd~~~~~~- 285 (383)
T 3ei3_B 211 EFNP-RCDWLMATSSVDAT-VKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDST-KLLTTDQRNEIRVYSSYDWSK- 285 (383)
T ss_dssp EECS-SCTTEEEEEETTSE-EEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSC-EEEEEESSSEEEEEETTBTTS-
T ss_pred EECC-CCCCEEEEEeCCCE-EEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCC-EEEEEcCCCcEEEEECCCCcc-
Confidence 9999 777 8999999998 9999998732 334444 6899999999999 998 999999999999999983331
Q ss_pred CCCCCCceeeeeC-----------------CCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 295 GPNGIDPMSMYSA-----------------GSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 295 ~~~~~~~~~~~~~-----------------~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
...+..| ...+..++|+|++++ +++.|+.|++|++
T Consensus 286 ------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~ 337 (383)
T 3ei3_B 286 ------PDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDA 337 (383)
T ss_dssp ------CSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEET
T ss_pred ------ccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEec
Confidence 1222222 234555777777765 6678999999985
No 108
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.5e-33 Score=231.23 Aligned_cols=233 Identities=15% Similarity=0.130 Sum_probs=197.7
Q ss_pred CCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEE
Q 038533 67 FDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGT 144 (337)
Q Consensus 67 ~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 144 (337)
.+|.+.|.+++| |++. +|++++ | .|++||+.++ .....+..|. ..|.+++|+| +++++++
T Consensus 15 ~~h~~~v~~~~~-~~~~---------~l~s~~~dg~v~vw~~~~~--~~~~~~~~~~-----~~v~~~~~~~-~~~~l~~ 76 (313)
T 3odt_A 15 KGHDQDVRDVVA-VDDS---------KVASVSRDGTVRLWSKDDQ--WLGTVVYTGQ-----GFLNSVCYDS-EKELLLF 76 (313)
T ss_dssp CCCSSCEEEEEE-EETT---------EEEEEETTSEEEEEEESSS--EEEEEEEECS-----SCEEEEEEET-TTTEEEE
T ss_pred hCCCCCcEEEEe-cCCC---------EEEEEEcCCcEEEEECCCC--EEEEEeecCC-----ccEEEEEECC-CCCEEEE
Confidence 689999999999 8888 788777 5 9999999887 6677777887 9999999999 9999999
Q ss_pred eeCCCcEEEEeCCCc---cchhhhhccCCceeEEEeCCCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEe
Q 038533 145 CSIDTTCTIWDIEKG---VVETQLIAHDKEVYDICWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAW 221 (337)
Q Consensus 145 ~~~dg~i~v~d~~~~---~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~ 221 (337)
++.||.|++|++... +.+..+..|...|.+++| +++.+++++.||.|++|| ..+.. .....|...+.++.|
T Consensus 77 ~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~i~~~d--~~~~~---~~~~~~~~~v~~~~~ 150 (313)
T 3odt_A 77 GGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF-QDGVVISGSWDKTAKVWK--EGSLV---YNLQAHNASVWDAKV 150 (313)
T ss_dssp EETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE-ETTEEEEEETTSEEEEEE--TTEEE---EEEECCSSCEEEEEE
T ss_pred ecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe-cCCEEEEEeCCCCEEEEc--CCcEE---EecccCCCceeEEEE
Confidence 999999999998765 456677789999999999 577999999999999999 22222 222246789999999
Q ss_pred ecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeec-ccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCC
Q 038533 222 NKQDLRYMATILMDSNKVVILDIRSPTLPVAELER-HRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGID 300 (337)
Q Consensus 222 ~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 300 (337)
.|.++.++++++.|+. |++||.. .....+.. |...+.+++|+|++. +++++.||.|++||++ + +..
T Consensus 151 ~~~~~~~l~~~~~d~~-i~i~d~~---~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~dg~i~i~d~~--~-----~~~ 217 (313)
T 3odt_A 151 VSFSENKFLTASADKT-IKLWQND---KVIKTFSGIHNDVVRHLAVVDDGH--FISCSNDGLIKLVDMH--T-----GDV 217 (313)
T ss_dssp EETTTTEEEEEETTSC-EEEEETT---EEEEEECSSCSSCEEEEEEEETTE--EEEEETTSEEEEEETT--T-----CCE
T ss_pred ccCCCCEEEEEECCCC-EEEEecC---ceEEEEeccCcccEEEEEEcCCCe--EEEccCCCeEEEEECC--c-----hhh
Confidence 9878999999999999 9999943 45666666 889999999999986 8899999999999998 3 122
Q ss_pred ceeeeeCCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 301 PMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 301 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
...+..|...|.+++|+|++ .+++++.||.|++|++
T Consensus 218 ~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~ 253 (313)
T 3odt_A 218 LRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSK 253 (313)
T ss_dssp EEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECT
T ss_pred hhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEEC
Confidence 44667799999999999999 6999999999999985
No 109
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=4.8e-33 Score=240.08 Aligned_cols=245 Identities=16% Similarity=0.271 Sum_probs=198.4
Q ss_pred CCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCc--cceeeecCCCCCcccCCeeEEEeecCCCCeEEEe
Q 038533 70 PYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSI--EPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTC 145 (337)
Q Consensus 70 ~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 145 (337)
......++++|+.. .++++++ + .|+||++..... .....+.+|. ..|++++|+|.++++|++|
T Consensus 34 ~~~~~~~~~~~~~~--------~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~-----~~V~~~~~~p~~~~~l~s~ 100 (402)
T 2aq5_A 34 TWDSGFCAVNPKFM--------ALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHT-----APVLDIAWCPHNDNVIASG 100 (402)
T ss_dssp CCSSCSEEECSSEE--------EEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCS-----SCEEEEEECTTCTTEEEEE
T ss_pred ccCCCcEEECCCeE--------EEEEEEcCCCEEEEEECccCCCCCCCCceEecCC-----CCEEEEEeCCCCCCEEEEE
Confidence 34556788998876 3444444 5 999999966421 3455677887 9999999998678999999
Q ss_pred eCCCcEEEEeCCCc-------cchhhhhccCCceeEEEeC-CC-cEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCc
Q 038533 146 SIDTTCTIWDIEKG-------VVETQLIAHDKEVYDICWG-EA-RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPL 216 (337)
Q Consensus 146 ~~dg~i~v~d~~~~-------~~~~~~~~~~~~v~~~~~~-~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i 216 (337)
+.||.|++||+.++ +.+..+.+|...|.+++|+ ++ ++|++++.||.|++||+++++....+. ...|...+
T Consensus 101 s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~v 179 (402)
T 2aq5_A 101 SEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLG-PDVHPDTI 179 (402)
T ss_dssp ETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEEC-TTTCCSCE
T ss_pred eCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEe-cCCCCCce
Confidence 99999999999987 5667788999999999999 54 699999999999999999887544432 13477899
Q ss_pred eEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEe-ecccce-eeEEEeCCCCCCeEEEE---cCCCcEEEEeCCCC
Q 038533 217 LRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAEL-ERHRAC-VNAIAWAPQSRRHICSV---GDDSQAFIWELPLP 291 (337)
Q Consensus 217 ~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~~l~~~---~~dg~i~iw~~~~~ 291 (337)
.+++|+| ++.+|++++.|+. |++||+++ .+.+..+ ..|... +.++.|+|++. +|++| +.|+.|++||++
T Consensus 180 ~~~~~~~-~~~~l~~~~~d~~-i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~~~~d~~i~iwd~~-- 253 (402)
T 2aq5_A 180 YSVDWSR-DGALICTSCRDKR-VRVIEPRK-GTVVAEKDRPHEGTRPVHAVFVSEGK-ILTTGFSRMSERQVALWDTK-- 253 (402)
T ss_dssp EEEEECT-TSSCEEEEETTSE-EEEEETTT-TEEEEEEECSSCSSSCCEEEECSTTE-EEEEEECTTCCEEEEEEETT--
T ss_pred EEEEECC-CCCEEEEEecCCc-EEEEeCCC-CceeeeeccCCCCCcceEEEEcCCCc-EEEEeccCCCCceEEEEcCc--
Confidence 9999999 9999999999998 99999998 5566677 678765 89999999998 99999 799999999998
Q ss_pred CCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEE-cCCcEEEEeC
Q 038533 292 PVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIA-FSNKMQLLKV 337 (337)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iw~l 337 (337)
....+ .......|...+.+++|+|+++.+++++ .|+.|++|++
T Consensus 254 ~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~ 297 (402)
T 2aq5_A 254 HLEEP---LSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEI 297 (402)
T ss_dssp BCSSC---SEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEE
T ss_pred cccCC---ceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEe
Confidence 32210 1123335778899999999999887655 6999999984
No 110
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.8e-33 Score=241.57 Aligned_cols=246 Identities=13% Similarity=0.132 Sum_probs=196.2
Q ss_pred CCCCeEEEecCCCCcccCcCCccEEEEeCC-eEEEEecCCCC-ccceeeecCCCC-------------------------
Q 038533 70 PYPPTKLMFDPNSSSRKSSSNRHLLASSGD-FLRLWDVGDSS-IEPVAVLNNSKS------------------------- 122 (337)
Q Consensus 70 ~~~i~~i~~~~~~~~~~~~~~~~~l~~~~~-~v~vw~~~~~~-~~~~~~~~~~~~------------------------- 122 (337)
..++.+++|+|+++ +|+++.+ .|++||+.+++ .+.+..+..+..
T Consensus 4 ~~p~~~v~~s~dg~---------~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (450)
T 2vdu_B 4 IHPLQNLLTSRDGS---------LVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENK 74 (450)
T ss_dssp ECCCCEEEECSSSS---------EEEEEETTEEEEEEEETTTEEEEEEEEECCC--------------------------
T ss_pred cccEEEEEecCCCC---------EEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhcccccccccccc
Confidence 35789999999998 8887776 99999998884 013333332211
Q ss_pred ------------------------CcccCCeeEEEeecCCCCeE-EEeeCCCcEEEEeCC--Cccchhhhh--ccCCcee
Q 038533 123 ------------------------SEFCAPLTSFDWNEIEPKRI-GTCSIDTTCTIWDIE--KGVVETQLI--AHDKEVY 173 (337)
Q Consensus 123 ------------------------~~~~~~i~~~~~~~~~~~~l-~~~~~dg~i~v~d~~--~~~~~~~~~--~~~~~v~ 173 (337)
..+...|.+++|+| ++++| ++|+.||.|++||+. +++.+..+. .|...|.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~ 153 (450)
T 2vdu_B 75 KLKSNKGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTS-DESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPN 153 (450)
T ss_dssp -------------------------CCCCCEEEEEECT-TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEE
T ss_pred ccccCcCccccccCccccCCCCCCCccCCceEEEEEcC-CCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCce
Confidence 01224799999999 88885 899999999999999 787777775 5678899
Q ss_pred EEEeC-CCcEEEEEcCCCeEEEEECCCCCCce-eeecCCCCCCCceEEEeecCC---CcEEEEEEecCCEEEEEECCCCC
Q 038533 174 DICWG-EARVFASVSADGSVRIFDLRDKEHST-IIYESPQPDTPLLRLAWNKQD---LRYMATILMDSNKVVILDIRSPT 248 (337)
Q Consensus 174 ~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~---~~~l~~~~~d~~~i~i~d~~~~~ 248 (337)
+++|+ ++++|++++.+|.+++|++.+.+... .......|...|.+++|+| + +.+|++++.|+. |++||+++ .
T Consensus 154 ~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~~~~~~~l~s~~~d~~-i~vwd~~~-~ 230 (450)
T 2vdu_B 154 AISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIK-DSDGHQFIITSDRDEH-IKISHYPQ-C 230 (450)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEE-CTTSCEEEEEEETTSC-EEEEEESC-T
T ss_pred EEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcC-CCCCCcEEEEEcCCCc-EEEEECCC-C
Confidence 99999 78999999999999999998876543 2222234678999999999 8 889999999998 99999998 4
Q ss_pred CCeEE-eecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeee----------------------
Q 038533 249 LPVAE-LERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMY---------------------- 305 (337)
Q Consensus 249 ~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~---------------------- 305 (337)
..+.. +.+|...|.+++|+ ++. +|++++.|+.|++||+..++. ...+.
T Consensus 231 ~~~~~~~~~h~~~v~~~~~s-d~~-~l~s~~~d~~v~vwd~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (450)
T 2vdu_B 231 FIVDKWLFGHKHFVSSICCG-KDY-LLLSAGGDDKIFAWDWKTGKN-------LSTFDYNSLIKPYLNDQHLAPPRFQNE 301 (450)
T ss_dssp TCEEEECCCCSSCEEEEEEC-STT-EEEEEESSSEEEEEETTTCCE-------EEEEECHHHHGGGCCTTSBC-------
T ss_pred ceeeeeecCCCCceEEEEEC-CCC-EEEEEeCCCeEEEEECCCCcE-------eeeecchhhhhhhhhhccccccccccc
Confidence 55655 56899999999999 888 999999999999999983321 11111
Q ss_pred ---eCCCceeEEEEccCCCceEEEE-cCCcEEEEeC
Q 038533 306 ---SAGSEINQLQWSPAQPDWLAIA-FSNKMQLLKV 337 (337)
Q Consensus 306 ---~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iw~l 337 (337)
.....|.+++|+|+++++++++ .|+.|+||++
T Consensus 302 ~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 302 NNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp ---CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred ccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 2345799999999999999988 8999999985
No 111
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=3.6e-32 Score=230.52 Aligned_cols=231 Identities=11% Similarity=0.142 Sum_probs=178.6
Q ss_pred CCCCCCCeEEEecCCCCcccCcCCccEEEEeCC-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeE-EE
Q 038533 67 FDHPYPPTKLMFDPNSSSRKSSSNRHLLASSGD-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRI-GT 144 (337)
Q Consensus 67 ~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l-~~ 144 (337)
..|...|.+++|+|++. +||+|++ .+++|++.+. ........ ..+..+++.+ +++.+ ++
T Consensus 16 ~~h~~~V~~v~fs~dg~---------~la~g~~~~~~iw~~~~~--~~~~~~~~-------~~~~~~~~~~-~~~~~~~~ 76 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQS---------CLILSTLKSFEIYNVHPV--AHIMSQEM-------RHLSKVRMLH-RTNYVAFV 76 (355)
T ss_dssp ---CCCCCEEEECTTSS---------EEEEECSSEEEEEEETTE--EEEEEEEC-------SCCCEEEECT-TSSEEEEE
T ss_pred ccCCCceEEEEECCCCC---------EEEEEcCCEEEEEecCCc--ceeeeeec-------CCeEEEEEcC-CCCEEEEE
Confidence 67999999999999999 9999997 8999998876 33333222 3466788887 66655 67
Q ss_pred eeCCCcEEEEeCCCccchhhhhccCCceeEEEeCCCcEEEEEcCCCeEEEEECCCC-CCceeeecCCCCCCCceEEEeec
Q 038533 145 CSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGEARVFASVSADGSVRIFDLRDK-EHSTIIYESPQPDTPLLRLAWNK 223 (337)
Q Consensus 145 ~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~i~~~~~~~ 223 (337)
++.|+.|++||+++++.+..+. +...|.++++++.. ++++ .++.|++||+.+. +....+.. +...+++++
T Consensus 77 ~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~-~~~~-~~~~i~i~d~~~~~~~~~~~~~------~~~~~~~s~ 147 (355)
T 3vu4_A 77 TGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREF-IVVS-YGDVISVFKFGNPWKRITDDIR------FGGVCEFSN 147 (355)
T ss_dssp CSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSE-EEEE-ETTEEEEEESSTTCCBSSCCEE------EEEEEEEET
T ss_pred ECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCE-EEEE-EcCEEEEEECCCCceeeEEecc------CCceEEEEc
Confidence 8888999999999999888776 67789999998544 3333 3789999999987 43333221 334556665
Q ss_pred CCCcEEEE--EEecCCEEEEEECCCCC--------------CC-eEEeecccceeeEEEeCCCCCCeEEEEcCCCc-EEE
Q 038533 224 QDLRYMAT--ILMDSNKVVILDIRSPT--------------LP-VAELERHRACVNAIAWAPQSRRHICSVGDDSQ-AFI 285 (337)
Q Consensus 224 ~~~~~l~~--~~~d~~~i~i~d~~~~~--------------~~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~-i~i 285 (337)
.++++ ++.++. |++||+++.. .+ +..+.+|...|++++|+|++. +|++|+.||+ |++
T Consensus 148 ---~~la~~sg~~~g~-v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~-~l~s~s~d~~~v~i 222 (355)
T 3vu4_A 148 ---GLLVYSNEFNLGQ-IHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSD-MVATCSQDGTIIRV 222 (355)
T ss_dssp ---TEEEEEESSCTTC-EEEEECCC------------------CCEEECCCSSCEEEEEECTTSS-EEEEEETTCSEEEE
T ss_pred ---cEEEEeCCCcCcE-EEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCC-EEEEEeCCCCEEEE
Confidence 56666 467787 9999998743 12 678899999999999999999 9999999998 999
Q ss_pred EeCCCCCCCCCCCCCceeee-e-CCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 286 WELPLPPVAGPNGIDPMSMY-S-AGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 286 w~~~~~~~~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
||++ + +.....+. + |...|.+++|+|++++|++++.|+.|+||++
T Consensus 223 wd~~--~-----~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~ 269 (355)
T 3vu4_A 223 FKTE--D-----GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEI 269 (355)
T ss_dssp EETT--T-----CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEES
T ss_pred EECC--C-----CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEc
Confidence 9999 3 12233454 4 9999999999999999999999999999985
No 112
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=8.2e-32 Score=234.51 Aligned_cols=286 Identities=9% Similarity=0.059 Sum_probs=218.9
Q ss_pred cceeeeeCCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCC
Q 038533 13 ENSVTHESPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSN 90 (337)
Q Consensus 13 ~~~~~~~~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~ 90 (337)
+.+..+.....+.+++|+ +.++++++. ++.|++|++................|...|.+++|+|++.
T Consensus 114 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~----~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~------- 182 (433)
T 3bws_A 114 RFISRFKTGFQPKSVRFIDNTRLAIPLLE----DEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNE------- 182 (433)
T ss_dssp EEEEEEECSSCBCCCEESSSSEEEEEBTT----SSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTE-------
T ss_pred eEEEEEcCCCCceEEEEeCCCeEEEEeCC----CCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCE-------
Confidence 344455566667899999 556666664 8899999987654332211101247888999999999998
Q ss_pred ccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeE-EEeeCCCcEEEEeCCCccchhhhhc
Q 038533 91 RHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRI-GTCSIDTTCTIWDIEKGVVETQLIA 167 (337)
Q Consensus 91 ~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l-~~~~~dg~i~v~d~~~~~~~~~~~~ 167 (337)
++++++ + .|++||+.++ +....+..|. ..+.+++|+| +++.+ ++++.|+.|++||+++++.+..+..
T Consensus 183 --~~~s~~~d~~v~~~d~~~~--~~~~~~~~~~-----~~~~~~~~~~-~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~ 252 (433)
T 3bws_A 183 --LWVSQMQANAVHVFDLKTL--AYKATVDLTG-----KWSKILLYDP-IRDLVYCSNWISEDISVIDRKTKLEIRKTDK 252 (433)
T ss_dssp --EEEEEGGGTEEEEEETTTC--CEEEEEECSS-----SSEEEEEEET-TTTEEEEEETTTTEEEEEETTTTEEEEECCC
T ss_pred --EEEEECCCCEEEEEECCCc--eEEEEEcCCC-----CCeeEEEEcC-CCCEEEEEecCCCcEEEEECCCCcEEEEecC
Confidence 888887 4 9999999988 5667777776 8899999999 77777 4555899999999999888777764
Q ss_pred cCCceeEEEeC-CCcEEEEEc--------CCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEE-EEEEecCC
Q 038533 168 HDKEVYDICWG-EARVFASVS--------ADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYM-ATILMDSN 237 (337)
Q Consensus 168 ~~~~v~~~~~~-~~~~l~~~~--------~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l-~~~~~d~~ 237 (337)
...+.+++|+ +++.+++++ .||.|++||+++++...... +...+.+++|+| +++.+ ++++.++.
T Consensus 253 -~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~----~~~~~~~~~~~~-~g~~l~~~~~~~~~ 326 (433)
T 3bws_A 253 -IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG----PPGNKRHIVSGN-TENKIYVSDMCCSK 326 (433)
T ss_dssp -CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE----EEECEEEEEECS-STTEEEEEETTTTE
T ss_pred -CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc----CCCCcceEEECC-CCCEEEEEecCCCE
Confidence 4568999999 687888887 58899999999886544432 235788999999 77655 55566766
Q ss_pred EEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcC---------------CCcEEEEeCCCCCCCCCCCCCce
Q 038533 238 KVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGD---------------DSQAFIWELPLPPVAGPNGIDPM 302 (337)
Q Consensus 238 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---------------dg~i~iw~~~~~~~~~~~~~~~~ 302 (337)
|++||+++ .+.+..+. +...+.+++|+|+++ +|++++. ||.|++||+..++ ..
T Consensus 327 -v~v~d~~~-~~~~~~~~-~~~~~~~~~~s~dg~-~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~--------~~ 394 (433)
T 3bws_A 327 -IEVYDLKE-KKVQKSIP-VFDKPNTIALSPDGK-YLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDT--------VK 394 (433)
T ss_dssp -EEEEETTT-TEEEEEEE-CSSSEEEEEECTTSS-EEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTE--------EE
T ss_pred -EEEEECCC-CcEEEEec-CCCCCCeEEEcCCCC-EEEEEecCCCccccccccccccceEEEEEECCCCc--------EE
Confidence 99999987 55555555 667899999999998 7777765 5799999998221 33
Q ss_pred eeeeCCCceeEEEEccCCCceEEEEc-CCcEEEEeC
Q 038533 303 SMYSAGSEINQLQWSPAQPDWLAIAF-SNKMQLLKV 337 (337)
Q Consensus 303 ~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~l 337 (337)
....+...+.+++|+|+++.|++++. |+.|++|++
T Consensus 395 ~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~ 430 (433)
T 3bws_A 395 EFWEAGNQPTGLDVSPDNRYLVISDFLDHQIRVYRR 430 (433)
T ss_dssp EEEECSSSEEEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred EEecCCCCCceEEEcCCCCEEEEEECCCCeEEEEEe
Confidence 33344667999999999998888875 999999985
No 113
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=5.4e-32 Score=235.85 Aligned_cols=232 Identities=16% Similarity=0.294 Sum_probs=200.3
Q ss_pred CCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEE
Q 038533 67 FDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGT 144 (337)
Q Consensus 67 ~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 144 (337)
.+|...|.++.| ++. ++++|+ | .|++||+.++ +....+.+|. ..|.+++| +++++++
T Consensus 130 ~~~~~~v~~~~~--d~~---------~l~~g~~dg~i~iwd~~~~--~~~~~~~~h~-----~~v~~l~~---~~~~l~s 188 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQ---------KIVSGLRDNTIKIWDKNTL--ECKRILTGHT-----GSVLCLQY---DERVIIT 188 (435)
T ss_dssp CSSCCCEEEEEC--CSS---------EEEEEESSSCEEEEESSSC--CEEEEECCCS-----SCEEEEEC---CSSEEEE
T ss_pred cCCCCcEEEEEE--CCC---------EEEEEeCCCeEEEEeCCCC--eEEEEEcCCC-----CcEEEEEE---CCCEEEE
Confidence 356778888887 666 777776 5 9999999988 6788888988 99999998 5689999
Q ss_pred eeCCCcEEEEeCCCccchhhhhccCCceeEEEeCCCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecC
Q 038533 145 CSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQ 224 (337)
Q Consensus 145 ~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 224 (337)
|+.||.|++||+++++.+..+.+|...|.+++|+ ++.+++|+.||.|++||+++.+..........|...+.+++|
T Consensus 189 g~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--- 264 (435)
T 1p22_A 189 GSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN-NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--- 264 (435)
T ss_dssp EETTSCEEEEESSSCCEEEEECCCCSCEEEEECC-TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE---
T ss_pred EcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc-CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe---
Confidence 9999999999999999999999999999999997 459999999999999999988765443444457889999999
Q ss_pred CCcEEEEEEecCCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceee
Q 038533 225 DLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSM 304 (337)
Q Consensus 225 ~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~ 304 (337)
+++++++++.|+. |++||+++ .+++..+.+|...|.++.|+ +. ++++|+.||.|++||++ + +.....+
T Consensus 265 ~~~~l~s~~~dg~-i~vwd~~~-~~~~~~~~~~~~~v~~~~~~--~~-~l~~g~~dg~i~iwd~~--~-----~~~~~~~ 332 (435)
T 1p22_A 265 DDKYIVSASGDRT-IKVWNTST-CEFVRTLNGHKRGIACLQYR--DR-LVVSGSSDNTIRLWDIE--C-----GACLRVL 332 (435)
T ss_dssp ETTEEEEEETTSE-EEEEETTT-CCEEEEEECCSSCEEEEEEE--TT-EEEEEETTSCEEEEETT--T-----CCEEEEE
T ss_pred CCCEEEEEeCCCe-EEEEECCc-CcEEEEEcCCCCcEEEEEeC--CC-EEEEEeCCCeEEEEECC--C-----CCEEEEE
Confidence 5789999999998 99999998 66788899999999999995 45 99999999999999998 3 2234467
Q ss_pred eeCCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 305 YSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 305 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
.+|...|.+++| ++..+++++.||.|++|++
T Consensus 333 ~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~ 363 (435)
T 1p22_A 333 EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDL 363 (435)
T ss_dssp CCCSSCEEEEEC--CSSEEEEEETTSCEEEEEH
T ss_pred eCCcCcEEEEEe--cCCEEEEEeCCCcEEEEEC
Confidence 789999999999 6678999999999999984
No 114
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=8.8e-32 Score=232.15 Aligned_cols=280 Identities=15% Similarity=0.239 Sum_probs=192.9
Q ss_pred CCCceeEEEEe---cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEE
Q 038533 20 SPYPLYAMAVC---GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLAS 96 (337)
Q Consensus 20 ~~~~v~~~~~s---~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~ 96 (337)
|..+|.+++|+ +++|++++. ||.|++|++........ ..+...+.++.|+|.+. ...++++
T Consensus 98 ~~~~v~~~~~~~~~~~~l~s~~~----d~~i~iwd~~~~~~~~~------~~~~~~~~~~~~~~~~~------~~~~~~~ 161 (408)
T 4a11_B 98 HRYSVETVQWYPHDTGMFTSSSF----DKTLKVWDTNTLQTADV------FNFEETVYSHHMSPVST------KHCLVAV 161 (408)
T ss_dssp CSSCEEEEEECTTCTTCEEEEET----TSEEEEEETTTTEEEEE------EECSSCEEEEEECSSCS------SCCEEEE
T ss_pred CCCcEEEEEEccCCCcEEEEEeC----CCeEEEeeCCCCcccee------ccCCCceeeeEeecCCC------CCcEEEE
Confidence 78899999998 678999996 99999999886543333 35778899999998643 1127777
Q ss_pred eC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCC-eEEEeeCCCcEEEEeCCCcc-chh---------
Q 038533 97 SG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPK-RIGTCSIDTTCTIWDIEKGV-VET--------- 163 (337)
Q Consensus 97 ~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~-~~~--------- 163 (337)
++ + .|++||+.++ +....+..|. ..|.+++|+| ++. ++++|+.||.|++||++++. .+.
T Consensus 162 ~~~~~~v~~~d~~~~--~~~~~~~~~~-----~~v~~~~~~~-~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 233 (408)
T 4a11_B 162 GTRGPKVQLCDLKSG--SCSHILQGHR-----QEILAVSWSP-RYDYILATASADSRVKLWDVRRASGCLITLDQHNGKK 233 (408)
T ss_dssp EESSSSEEEEESSSS--CCCEEECCCC-----SCEEEEEECS-SCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCS
T ss_pred EcCCCeEEEEeCCCc--ceeeeecCCC-----CcEEEEEECC-CCCcEEEEEcCCCcEEEEECCCCCccccccccccccc
Confidence 66 5 9999999988 6777888888 9999999999 766 69999999999999998764 222
Q ss_pred ------hhhccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCC-CCCCCceEEEeecCCCcEEEEEEec
Q 038533 164 ------QLIAHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESP-QPDTPLLRLAWNKQDLRYMATILMD 235 (337)
Q Consensus 164 ------~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~~~~~d 235 (337)
....|...|.+++|+ ++++|++++.||.|++||+++++......... ........+.+.......+++++.+
T Consensus 234 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (408)
T 4a11_B 234 SQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYG 313 (408)
T ss_dssp CCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEET
T ss_pred ceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecC
Confidence 225788999999999 78899999999999999999887543332110 0111112222222256677777888
Q ss_pred CCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEE
Q 038533 236 SNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQ 315 (337)
Q Consensus 236 ~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 315 (337)
+. |++||+.+ ..++..+.+|...|.+++|+|+++ +|++++.||.|++|+++..+ . .. .....-....
T Consensus 314 ~~-i~v~d~~~-~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~iw~~~~~~--~------~~--~~~~~~~~~~ 380 (408)
T 4a11_B 314 ST-IAVYTVYS-GEQITMLKGHYKTVDCCVFQSNFQ-ELYSGSRDCNILAWVPSLYE--P------VP--DDDETTTKSQ 380 (408)
T ss_dssp TE-EEEEETTT-CCEEEEECCCSSCEEEEEEETTTT-EEEEEETTSCEEEEEECC-------------------------
T ss_pred CE-EEEEECcC-CcceeeeccCCCeEEEEEEcCCCC-EEEEECCCCeEEEEeCCCCC--c------cC--CCCceEeccc
Confidence 87 99999998 677889999999999999999999 99999999999999999322 1 11 1111112233
Q ss_pred EccCC-CceEEEEcCCcEEEEe
Q 038533 316 WSPAQ-PDWLAIAFSNKMQLLK 336 (337)
Q Consensus 316 ~~~~~-~~l~~~~~d~~i~iw~ 336 (337)
+.|.. ..+.+.+.++.+++|+
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~W~ 402 (408)
T 4a11_B 381 LNPAFEDAWSSSDEEGGTSAWS 402 (408)
T ss_dssp ----------------------
T ss_pred cccccceeecccCccCceeecC
Confidence 44432 2344556789999996
No 115
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.5e-32 Score=227.64 Aligned_cols=260 Identities=10% Similarity=0.063 Sum_probs=188.9
Q ss_pred cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCC
Q 038533 31 GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGD 108 (337)
Q Consensus 31 ~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~ 108 (337)
+++|++|+. ||.|++|++......... . ...|.++.|+|+ +++++ | +|++|+...
T Consensus 48 ~~~l~sg~~----Dg~v~iwd~~~~~~~~~~-----~--~~~v~~~~~~~~------------~~s~s~D~~i~~w~~~~ 104 (343)
T 3lrv_A 48 KWVCMCRCE----DGALHFTQLKDSKTITTI-----T--TPNPRTGGEHPA------------IISRGPCNRLLLLYPGN 104 (343)
T ss_dssp EEEEEEEEE----TTEEEEEEESSSSCEEEE-----E--EECCCTTCCCCS------------EEEECSTTEEEEEETTT
T ss_pred CCEEEEECC----CCcEEEEECCCCcEEEEE-----e--cCCceeeeeCCc------------eEEecCCCeEEEEEccC
Confidence 889999998 999999999866543332 1 345666666653 45555 5 888887653
Q ss_pred CC-------ccceeeec-CCCCCcccCCeeEEEeecC-CCCeEEEeeCCCcEEEEeCCCccchhhhh-ccCCceeEEEeC
Q 038533 109 SS-------IEPVAVLN-NSKSSEFCAPLTSFDWNEI-EPKRIGTCSIDTTCTIWDIEKGVVETQLI-AHDKEVYDICWG 178 (337)
Q Consensus 109 ~~-------~~~~~~~~-~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~-~~~~~v~~~~~~ 178 (337)
.. .+.+..+. +|. .+|.+++|+|. +++++++|+.||.|++||+++++.+.... .+...+.+++|+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~ 179 (343)
T 3lrv_A 105 QITILDSKTNKVLREIEVDSA-----NEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLH 179 (343)
T ss_dssp EEEEEETTTCCEEEEEECCCS-----SCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEEC
T ss_pred ceEEeecCCcceeEEeecCCC-----CCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEEC
Confidence 20 02232332 454 78999999972 67899999999999999999988765553 455679999999
Q ss_pred -CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEee--
Q 038533 179 -EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELE-- 255 (337)
Q Consensus 179 -~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~-- 255 (337)
++.+|++|+.||.|++||+++++........ .|..+|.+++|+| ++.+|++++ ++. |++||+++.. .+..+.
T Consensus 180 pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~-~h~~~v~~l~fs~-~g~~l~s~~-~~~-v~iwd~~~~~-~~~~~~~~ 254 (343)
T 3lrv_A 180 KDSLLLALYSPDGILDVYNLSSPDQASSRFPV-DEEAKIKEVKFAD-NGYWMVVEC-DQT-VVCFDLRKDV-GTLAYPTY 254 (343)
T ss_dssp TTSCEEEEECTTSCEEEEESSCTTSCCEECCC-CTTSCEEEEEECT-TSSEEEEEE-SSB-EEEEETTSST-TCBSSCCC
T ss_pred CCCCEEEEEcCCCEEEEEECCCCCCCccEEec-cCCCCEEEEEEeC-CCCEEEEEe-CCe-EEEEEcCCCC-cceeeccc
Confidence 7999999999999999999998865222222 3779999999999 999999999 556 9999999843 333333
Q ss_pred -cccceee--EEEeCCCCCCeEEEEcC-CCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEcc---CCCceEEEEc
Q 038533 256 -RHRACVN--AIAWAPQSRRHICSVGD-DSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSP---AQPDWLAIAF 328 (337)
Q Consensus 256 -~~~~~v~--~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~ 328 (337)
.|...+. +++|+|+++ +|++++. |+.+++|++. +..+ .... .++..++|.| +...+++++.
T Consensus 255 ~~~~~~~~~~~~~~~~~g~-~l~~~s~~d~~i~v~~~~--~~~~-----~~~~----~~~~~~~~~~~~~~~~~l~~~~~ 322 (343)
T 3lrv_A 255 TIPEFKTGTVTYDIDDSGK-NMIAYSNESNSLTIYKFD--KKTK-----NWTK----DEESALCLQSDTADFTDMDVVCG 322 (343)
T ss_dssp BC-----CCEEEEECTTSS-EEEEEETTTTEEEEEEEC--TTTC-----SEEE----EEEEECCC----CCCCEEEEEEE
T ss_pred ccccccccceEEEECCCCC-EEEEecCCCCcEEEEEEc--cccc-----ceEe----cCceeEecCccccccceeEEEec
Confidence 2444444 699999999 9999888 9999999997 3211 1111 5677888888 7777888888
Q ss_pred CCcEEEE
Q 038533 329 SNKMQLL 335 (337)
Q Consensus 329 d~~i~iw 335 (337)
|+.+.++
T Consensus 323 d~~~~~~ 329 (343)
T 3lrv_A 323 DGGIAAI 329 (343)
T ss_dssp TTEEEEE
T ss_pred CCceEEE
Confidence 8888765
No 116
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.7e-31 Score=227.13 Aligned_cols=244 Identities=14% Similarity=0.231 Sum_probs=191.9
Q ss_pred CCCCCCCCeEEEecCCC---CcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCC
Q 038533 66 SFDHPYPPTKLMFDPNS---SSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPK 140 (337)
Q Consensus 66 ~~~~~~~i~~i~~~~~~---~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 140 (337)
..+|.+.|++++|+|++ . +|++|+ | .|++||+.+........+.+|. ..|.+++|+| +++
T Consensus 35 ~~~h~~~v~~~~~~~~~~~g~---------~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~-----~~v~~~~~~~-~~~ 99 (368)
T 3mmy_A 35 TSSPDDSIGCLSFSPPTLPGN---------FLIAGSWANDVRCWEVQDSGQTIPKAQQMHT-----GPVLDVCWSD-DGS 99 (368)
T ss_dssp SSCCSSCEEEEEECCTTSSSE---------EEEEEETTSEEEEEEECTTSCEEEEEEEECS-----SCEEEEEECT-TSS
T ss_pred ccCCCCceEEEEEcCCCCCce---------EEEEECCCCcEEEEEcCCCCceeEEEecccc-----CCEEEEEECc-CCC
Confidence 37899999999999994 6 888877 5 9999999984334447788888 9999999999 999
Q ss_pred eEEEeeCCCcEEEEeCCCccchhhhhccCCceeEEEe--C-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCce
Q 038533 141 RIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICW--G-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLL 217 (337)
Q Consensus 141 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~--~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~ 217 (337)
+|++++.||.|++||+++++.+. +..|...|.+++| + ++++|++++.||.|++||+++++....+... ..+.
T Consensus 100 ~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~----~~~~ 174 (368)
T 3mmy_A 100 KVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLP----ERCY 174 (368)
T ss_dssp EEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECS----SCEE
T ss_pred EEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecC----CCce
Confidence 99999999999999999888665 5569999999999 6 6789999999999999999998866555432 4667
Q ss_pred EEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEee-cccceeeEEEeCCCCC---CeEEEEcCCCcEEEEeCCCCCC
Q 038533 218 RLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELE-RHRACVNAIAWAPQSR---RHICSVGDDSQAFIWELPLPPV 293 (337)
Q Consensus 218 ~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~---~~l~~~~~dg~i~iw~~~~~~~ 293 (337)
++.+.+ ..+++++.++. +.+||++.......... .+...+.++.+.++.. ..+++++.||.|++|+++....
T Consensus 175 ~~~~~~---~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~ 250 (368)
T 3mmy_A 175 CADVIY---PMAVVATAERG-LIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNP 250 (368)
T ss_dssp EEEEET---TEEEEEEGGGC-EEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCH
T ss_pred EEEecC---CeeEEEeCCCc-EEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCc
Confidence 777654 57888888998 99999987543333322 2234455555555444 1399999999999999983221
Q ss_pred CCCCCCCceeeeeCCC------------ceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 294 AGPNGIDPMSMYSAGS------------EINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 294 ~~~~~~~~~~~~~~~~------------~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
. .....+..|.. +|.+++|+|++++|++++.||.|++|++
T Consensus 251 ~----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~ 302 (368)
T 3mmy_A 251 A----KDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDK 302 (368)
T ss_dssp H----HHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEET
T ss_pred c----ccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEEC
Confidence 0 11234455554 7999999999999999999999999985
No 117
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.8e-30 Score=216.53 Aligned_cols=237 Identities=19% Similarity=0.343 Sum_probs=196.2
Q ss_pred CCeEEEecCCCCcccCcCCccEEEEeCC-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCc
Q 038533 72 PPTKLMFDPNSSSRKSSSNRHLLASSGD-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTT 150 (337)
Q Consensus 72 ~i~~i~~~~~~~~~~~~~~~~~l~~~~~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~ 150 (337)
..++|+||+++ +||+|.| +|+|||+.+++......+.+|. ..|++++|+| +++++++|+.||.
T Consensus 27 y~~~l~WS~~~----------~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~-----~~V~~v~~~~-~~~~l~sgs~Dg~ 90 (318)
T 4ggc_A 27 YLNLVDWSSGN----------VLAVALDNSVYLWSASSGDILQLLQMEQPG-----EYISSVAWIK-EGNYLAVGTSSAE 90 (318)
T ss_dssp TCBCEEECTTS----------EEEEEETTEEEEEETTTCCEEEEEECCSTT-----CCEEEEEECT-TSSEEEEEETTSE
T ss_pred cceEEEECCCC----------EEEEEeCCEEEEEECCCCCEEEEEEecCCC-----CeEEEEEECC-CCCEEEEEECCCc
Confidence 35789999874 8888888 9999999999533333445565 7899999999 9999999999999
Q ss_pred EEEEeCCCccchhhhhccCCceeEEEeCCCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEE
Q 038533 151 CTIWDIEKGVVETQLIAHDKEVYDICWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMA 230 (337)
Q Consensus 151 i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 230 (337)
|++||+++++.+..+.+|...+.++.+. +..+++++.++.+++|+............ .|...+..+.+++ ++.+|+
T Consensus 91 v~iw~~~~~~~~~~~~~h~~~~~~~~~~-~~~l~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~l~ 166 (318)
T 4ggc_A 91 VQLWDVQQQKRLRNMTSHSARVGSLSWN-SYILSSGSRSGHIHHHDVRVAEHHVATLS--GHSQEVCGLRWAP-DGRHLA 166 (318)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEEE-TTEEEEEETTSEEEEEETTSSSCEEEEEE--CCSSCEEEEEECT-TSSEEE
T ss_pred EEEeecCCceeEEEecCccceEEEeecC-CCEEEEEecCCceEeeecCCCceeEEEEc--CccCceEEEEEcC-CCCEEE
Confidence 9999999999999999999888776664 67999999999999999988765444443 3778999999999 999999
Q ss_pred EEEecCCEEEEEECCCCC---CCeEEeecccceeeEEEeCCCCCCeE--EEEcCCCcEEEEeCCCCCCCCCCCCCceeee
Q 038533 231 TILMDSNKVVILDIRSPT---LPVAELERHRACVNAIAWAPQSRRHI--CSVGDDSQAFIWELPLPPVAGPNGIDPMSMY 305 (337)
Q Consensus 231 ~~~~d~~~i~i~d~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l--~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~ 305 (337)
+++.|+. |++||+++.. ........+...|.+++++|.+..++ ++++.++.|++||.. . .......
T Consensus 167 s~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~--~------~~~~~~~ 237 (318)
T 4ggc_A 167 SGGNDNL-VNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC--S------GACLSAV 237 (318)
T ss_dssp EEETTSC-EEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETT--T------CCEEEEE
T ss_pred EEecCcc-eeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecc--c------ccccccc
Confidence 9999999 9999998743 23445566788999999999887554 456788999999998 3 2245566
Q ss_pred eCCCceeEEEEccCCCceEEEE--cCCcEEEEeC
Q 038533 306 SAGSEINQLQWSPAQPDWLAIA--FSNKMQLLKV 337 (337)
Q Consensus 306 ~~~~~v~~~~~~~~~~~l~~~~--~d~~i~iw~l 337 (337)
.+...+..+.|+|+++.+++++ .|+.|+||++
T Consensus 238 ~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~ 271 (318)
T 4ggc_A 238 DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKY 271 (318)
T ss_dssp ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEET
T ss_pred cceeeeeeeeecccccceEEEEEcCCCEEEEEEC
Confidence 7888899999999999888765 6899999985
No 118
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.5e-32 Score=227.01 Aligned_cols=222 Identities=11% Similarity=0.079 Sum_probs=171.4
Q ss_pred EEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCC---------Cccc
Q 038533 93 LLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIE---------KGVV 161 (337)
Q Consensus 93 ~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~---------~~~~ 161 (337)
+|++|+ | .|++||+.++ +.+..+.. ..|.++.|+| . +++++.|+.|++|+.. +++.
T Consensus 50 ~l~sg~~Dg~v~iwd~~~~--~~~~~~~~-------~~v~~~~~~~-~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~ 116 (343)
T 3lrv_A 50 VCMCRCEDGALHFTQLKDS--KTITTITT-------PNPRTGGEHP-A---IISRGPCNRLLLLYPGNQITILDSKTNKV 116 (343)
T ss_dssp EEEEEEETTEEEEEEESSS--SCEEEEEE-------ECCCTTCCCC-S---EEEECSTTEEEEEETTTEEEEEETTTCCE
T ss_pred EEEEECCCCcEEEEECCCC--cEEEEEec-------CCceeeeeCC-c---eEEecCCCeEEEEEccCceEEeecCCcce
Confidence 888887 6 9999999998 45555552 6788899988 4 9999999999999765 3332
Q ss_pred hhhhh-ccCCceeEEEeCC---CcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCC
Q 038533 162 ETQLI-AHDKEVYDICWGE---ARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSN 237 (337)
Q Consensus 162 ~~~~~-~~~~~v~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~ 237 (337)
+..+. .|.+.|.+++|++ ++++++++.||.|++||+++++....... .+...+.+++|+| ++.+|++|+.|+.
T Consensus 117 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~--~~~~~i~~~~~~p-dg~~lasg~~dg~ 193 (343)
T 3lrv_A 117 LREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSA--KSDVEYSSGVLHK-DSLLLALYSPDGI 193 (343)
T ss_dssp EEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECC--CSSCCCCEEEECT-TSCEEEEECTTSC
T ss_pred eEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEec--CCCCceEEEEECC-CCCEEEEEcCCCE
Confidence 33333 5668899999995 67999999999999999998875333222 3556799999999 9999999999999
Q ss_pred EEEEEECCCCCCCeEEeec-ccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCcee--EE
Q 038533 238 KVVILDIRSPTLPVAELER-HRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEIN--QL 314 (337)
Q Consensus 238 ~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~--~~ 314 (337)
|++||+++.......+.. |..+|++++|+|++. +|++++ |+.|++||++...... . ...+..|...+. ++
T Consensus 194 -i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~-~l~s~~-~~~v~iwd~~~~~~~~--~--~~~~~~~~~~~~~~~~ 266 (343)
T 3lrv_A 194 -LDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGY-WMVVEC-DQTVVCFDLRKDVGTL--A--YPTYTIPEFKTGTVTY 266 (343)
T ss_dssp -EEEEESSCTTSCCEECCCCTTSCEEEEEECTTSS-EEEEEE-SSBEEEEETTSSTTCB--S--SCCCBC-----CCEEE
T ss_pred -EEEEECCCCCCCccEEeccCCCCEEEEEEeCCCC-EEEEEe-CCeEEEEEcCCCCcce--e--ecccccccccccceEE
Confidence 999999985443377887 999999999999999 999999 5599999999332111 0 111112333444 69
Q ss_pred EEccCCCceEEEEc-CCcEEEEeC
Q 038533 315 QWSPAQPDWLAIAF-SNKMQLLKV 337 (337)
Q Consensus 315 ~~~~~~~~l~~~~~-d~~i~iw~l 337 (337)
+|+|++++|++++. |+.++||++
T Consensus 267 ~~~~~g~~l~~~s~~d~~i~v~~~ 290 (343)
T 3lrv_A 267 DIDDSGKNMIAYSNESNSLTIYKF 290 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEE
T ss_pred EECCCCCEEEEecCCCCcEEEEEE
Confidence 99999999999888 999999963
No 119
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=9.3e-32 Score=231.09 Aligned_cols=235 Identities=12% Similarity=0.145 Sum_probs=168.7
Q ss_pred cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecC--------CCCcccCcCCccEEEEeC-C-e
Q 038533 31 GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDP--------NSSSRKSSSNRHLLASSG-D-F 100 (337)
Q Consensus 31 ~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~--------~~~~~~~~~~~~~l~~~~-~-~ 100 (337)
+.+||+|+. |++|+||+.+..............+|.+.|++++|+| ++. +||+++ | +
T Consensus 101 ~~~las~~~----d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~---------~las~s~D~t 167 (393)
T 4gq1_A 101 SLFLACVCQ----DNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQ---------VIASVGDDCT 167 (393)
T ss_dssp EEEEEEEET----TSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEE---------EEEEEETTSE
T ss_pred CCEEEEEeC----CCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCC---------EEEEEECCCe
Confidence 567999996 9999999998765432211122378999999999998 565 999988 5 9
Q ss_pred EEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhh----------------
Q 038533 101 LRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQ---------------- 164 (337)
Q Consensus 101 v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~---------------- 164 (337)
|+|||+.++ .+...+..|. .+|.+++|+|.+..+|++|+.||.|++||+++++....
T Consensus 168 v~~Wd~~~~--~~~~~~~~~~-----~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~ 240 (393)
T 4gq1_A 168 LIIWRLTDE--GPILAGYPLS-----SPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLN 240 (393)
T ss_dssp EEEEEEETT--EEEEEEEECS-----SCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEE
T ss_pred EEEEECCCC--ceeeeecCCC-----CCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecc
Confidence 999999887 5666666776 89999999994446899999999999999987753322
Q ss_pred ---------hhccCCceeEEEeC--CCcEEEEEcCCCeEEEEECCCCCCceeeecCC---------------CCCCCceE
Q 038533 165 ---------LIAHDKEVYDICWG--EARVFASVSADGSVRIFDLRDKEHSTIIYESP---------------QPDTPLLR 218 (337)
Q Consensus 165 ---------~~~~~~~v~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~---------------~~~~~i~~ 218 (337)
..+|...+.++.|. +++.+++++.|+++++||+...+....+.... ........
T Consensus 241 ~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (393)
T 4gq1_A 241 TLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLG 320 (393)
T ss_dssp SGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSC
T ss_pred cccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCccee
Confidence 13567788999997 68999999999999999998765332221100 01112223
Q ss_pred EEeecCCCc-EEEEEEecCCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCC
Q 038533 219 LAWNKQDLR-YMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 219 ~~~~~~~~~-~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 289 (337)
..|+|..+. ++++++.|+. |++||+.+ +.+...+..|..+|.+++|+|+|+ +||+++.+| +.+|.+.
T Consensus 321 ~~~~~~~~~~~~~sgs~Dg~-V~lwd~~~-~~~~~~~~~~~~~V~svafspdG~-~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 321 ACPHPRYMDYFATAHSQHGL-IQLINTYE-KDSNSIPIQLGMPIVDFCWHQDGS-HLAIATEGS-VLLTRLM 388 (393)
T ss_dssp CEECSSCTTEEEEEETTTTE-EEEEETTC-TTCCEEEEECSSCEEEEEECTTSS-EEEEEESSE-EEEEEEG
T ss_pred EEEccCCCCEEEEEECCCCE-EEEEECCC-CcEEEEecCCCCcEEEEEEcCCCC-EEEEEeCCC-eEEEEEe
Confidence 344443444 5556667777 99999998 556677778889999999999999 999998665 6666654
No 120
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=7.4e-30 Score=219.20 Aligned_cols=261 Identities=10% Similarity=0.149 Sum_probs=197.2
Q ss_pred ceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCC
Q 038533 32 QRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDS 109 (337)
Q Consensus 32 ~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~ 109 (337)
.++++++. |+.|++|+++....... ..+...+.+++|+|+++ .++++++ + .|++||+.++
T Consensus 3 ~l~vs~~~----d~~v~v~d~~~~~~~~~------~~~~~~~~~~~~s~dg~--------~l~~~~~~d~~i~v~d~~~~ 64 (391)
T 1l0q_A 3 FAYIANSE----SDNISVIDVTSNKVTAT------IPVGSNPMGAVISPDGT--------KVYVANAHSNDVSIIDTATN 64 (391)
T ss_dssp EEEEEETT----TTEEEEEETTTTEEEEE------EECSSSEEEEEECTTSS--------EEEEEEGGGTEEEEEETTTT
T ss_pred EEEEEcCC----CCEEEEEECCCCeEEEE------eecCCCcceEEECCCCC--------EEEEECCCCCeEEEEECCCC
Confidence 35666665 99999999875533222 23335589999999998 3446664 5 9999999988
Q ss_pred CccceeeecCCCCCcccCCeeEEEeecCCCCeEE-EeeCCCcEEEEeCCCccchhhhhccCCceeEEEeC-CCcEE-EEE
Q 038533 110 SIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIG-TCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWG-EARVF-ASV 186 (337)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~-~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~l-~~~ 186 (337)
+....+..+ ..+.+++|+| ++++++ +++.++.|++||+.+++.+..+.. ...+.+++|+ +++.+ +++
T Consensus 65 --~~~~~~~~~------~~v~~~~~sp-dg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~ 134 (391)
T 1l0q_A 65 --NVIATVPAG------SSPQGVAVSP-DGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-GKSPLGLALSPDGKKLYVTN 134 (391)
T ss_dssp --EEEEEEECS------SSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEE
T ss_pred --eEEEEEECC------CCccceEECC-CCCEEEEEECCCCEEEEEECCCCeEEEEEeC-CCCcceEEECCCCCEEEEEe
Confidence 566666654 5799999999 888765 555679999999999987777664 4568999999 67766 788
Q ss_pred cCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEE-EEEecCCEEEEEECCCCCCCeEEeecccceeeEEE
Q 038533 187 SADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMA-TILMDSNKVVILDIRSPTLPVAELERHRACVNAIA 265 (337)
Q Consensus 187 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~-~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~ 265 (337)
+.++.|++||+++++....+.. ...+.+++|+| ++++++ +++.++. |++||+++ .+.+..+. +...+.+++
T Consensus 135 ~~~~~v~~~d~~~~~~~~~~~~----~~~~~~~~~~~-dg~~l~~~~~~~~~-v~~~d~~~-~~~~~~~~-~~~~~~~~~ 206 (391)
T 1l0q_A 135 NGDKTVSVINTVTKAVINTVSV----GRSPKGIAVTP-DGTKVYVANFDSMS-ISVIDTVT-NSVIDTVK-VEAAPSGIA 206 (391)
T ss_dssp TTTTEEEEEETTTTEEEEEEEC----CSSEEEEEECT-TSSEEEEEETTTTE-EEEEETTT-TEEEEEEE-CSSEEEEEE
T ss_pred CCCCEEEEEECCCCcEEEEEec----CCCcceEEECC-CCCEEEEEeCCCCE-EEEEECCC-CeEEEEEe-cCCCccceE
Confidence 8899999999998875544432 25679999999 888775 5555666 99999987 44455554 566889999
Q ss_pred eCCCCCCeEEEEc---CCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceE-EEEcCCcEEEEeC
Q 038533 266 WAPQSRRHICSVG---DDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWL-AIAFSNKMQLLKV 337 (337)
Q Consensus 266 ~~~~~~~~l~~~~---~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iw~l 337 (337)
|+|+++ +|++++ .++.|++||+..++ ..........+.+++|+|+++.++ +++.|+.|++|++
T Consensus 207 ~~~~g~-~l~~~~~~~~~~~v~~~d~~~~~--------~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~ 273 (391)
T 1l0q_A 207 VNPEGT-KAYVTNVDKYFNTVSMIDTGTNK--------ITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDT 273 (391)
T ss_dssp ECTTSS-EEEEEEECSSCCEEEEEETTTTE--------EEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred ECCCCC-EEEEEecCcCCCcEEEEECCCCe--------EEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEEC
Confidence 999999 777776 68999999998221 232333344689999999998775 4567999999985
No 121
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=1.9e-30 Score=211.64 Aligned_cols=277 Identities=10% Similarity=0.091 Sum_probs=188.3
Q ss_pred eeEEEEe-----cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEe-
Q 038533 24 LYAMAVC-----GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASS- 97 (337)
Q Consensus 24 v~~~~~s-----~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~- 97 (337)
+.++.|- .-.+++++ ...|++|+.... ...+...++ ..|+.+|..+.+.||.. +++..+
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~-----~~~v~lw~~~~~-~~~~~~~~~-~~~~~~v~~~~~~~~~~--------~~~~~~~ 106 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITAC-----EDVVSLWKALDA-WQWEKLYTW-HFAEVPVLQIVPVPDVY--------NLVCVAL 106 (356)
T ss_dssp EEEEEEC----CEEEEEEEE-----SSEEEEEEESSS-SBEEEEEEE-ECCSSCEEEECCCTTCC--------SCEEEEE
T ss_pred EeeeeeccCCCCccEEEEec-----cceEEEcccCCC-ccceeeEEE-eccCceeEEEEEcCccc--------ceeeeee
Confidence 4555554 34678888 899999998875 222222233 67889999999999877 344443
Q ss_pred CC-eE-EEEecC--CC--CccceeeecCCCCCcccCCeeEEEeecCCCCeEEEee--CCCcEEEEeC-CCccchhhhhcc
Q 038533 98 GD-FL-RLWDVG--DS--SIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCS--IDTTCTIWDI-EKGVVETQLIAH 168 (337)
Q Consensus 98 ~~-~v-~vw~~~--~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~--~dg~i~v~d~-~~~~~~~~~~~~ 168 (337)
++ .+ .++-+. .. .......-.+|. ..|..+ + +++++.+++ .|+.|++|++ .+++.+..+..|
T Consensus 107 ~~~~~~~v~sla~spd~~~~~~~l~s~g~~-----~~v~~l---~-~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~ 177 (356)
T 2w18_A 107 GNLEIREIRALFCSSDDESEKQVLLKSGNI-----KAVLGL---T-KRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLM 177 (356)
T ss_dssp CSSSEEEEEEECC------CCEEEEEEEEE-----EEEEEE---T-TTEEEEEESSSTTCEEEEEEECTTSCEEEEEEEC
T ss_pred ccccccceEEEEECCCccccccEEEeCCCe-----EEEEec---C-CCcEEEecccCCCCcEEEEEECCCCceeeeeccC
Confidence 33 22 222221 11 111111122333 445443 3 666666644 6999999999 557777788889
Q ss_pred CCceeEEEeC--C--CcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEE------------EEE
Q 038533 169 DKEVYDICWG--E--ARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYM------------ATI 232 (337)
Q Consensus 169 ~~~v~~~~~~--~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l------------~~~ 232 (337)
...+..++|+ + +.+|++++.|++|++||+++++....+.....+...+.+++|+| ++.++ ++|
T Consensus 178 ~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSp-dG~~lvs~s~~~~~w~laSG 256 (356)
T 2w18_A 178 PPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSE-MGLLFIVLSHPCAKESESLR 256 (356)
T ss_dssp CCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEE-TTEEEEEEC-----------
T ss_pred CCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECC-CCCEEEEeccCCCcceeecc
Confidence 9888888888 2 58999999999999999999997777654323345788889999 88876 456
Q ss_pred EecCCEEEEEECCCCCCCeEEe-----ecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeC
Q 038533 233 LMDSNKVVILDIRSPTLPVAEL-----ERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSA 307 (337)
Q Consensus 233 ~~d~~~i~i~d~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~ 307 (337)
+.|+. |++||..+ ++.+..+ .+|...+.+..++ +. ++++++.|++|+|||+. + +.....+.+|
T Consensus 257 s~D~t-IklWd~~t-gk~l~v~~~~~p~Gh~~~~lsg~~s--g~-~lASgS~DgTIkIWDl~--t-----Gk~l~tL~gH 324 (356)
T 2w18_A 257 SPVFQ-LIVINPKT-TLSVGVMLYCLPPGQAGRFLEGDVK--DH-CAAAILTSGTIAIWDLL--L-----GQCTALLPPV 324 (356)
T ss_dssp -CCEE-EEEEETTT-TEEEEEEEECCCTTCCCCEEEEEEE--TT-EEEEEETTSCEEEEETT--T-----CSEEEEECCC
T ss_pred CCCcE-EEEEECCC-CEEEEEEEeeccCCCcceeEccccC--CC-EEEEEcCCCcEEEEECC--C-----CcEEEEecCC
Confidence 67777 99999987 5444443 3565555444444 66 89999999999999999 3 2223466678
Q ss_pred CCcee-EEEEccCCCceEEEEcCCcEEEEeC
Q 038533 308 GSEIN-QLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 308 ~~~v~-~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
...+. .++|+|+|++|++++.|++|+||++
T Consensus 325 ~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 325 SDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp --CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 77655 6899999999999999999999984
No 122
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.98 E-value=5.7e-31 Score=228.07 Aligned_cols=265 Identities=14% Similarity=0.098 Sum_probs=193.7
Q ss_pred eCCCceeEEEEe-cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEe
Q 038533 19 ESPYPLYAMAVC-GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASS 97 (337)
Q Consensus 19 ~~~~~v~~~~~s-~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~ 97 (337)
.|+..|++++|+ .. . ++.+.+|+.+ ..... ...|...|.+++|+|++. +||++
T Consensus 50 gh~~~v~~V~FsPdg------~----~~~~~~~~~~--~~~~~-----~~~~~~~V~~vawSPdG~---------~LAs~ 103 (588)
T 2j04_A 50 CNSKNLFHVKEFPLE------F----ENKLDFELAQ--QNGLL-----NSQPVCYPRVCKPSPIDD---------WMAVL 103 (588)
T ss_dssp SBGGGTEEEEEECCC------C----CCTTTTSCCC--SSCSS-----TTSCSCCEEEEEECSSSS---------CEEEE
T ss_pred CCCccEEEEEECCCC------C----cceEEEEeCC--CceEe-----ecCCCCcEEEEEECCCCC---------EEEEE
Confidence 467889999998 22 2 6666665432 11111 246688999999999999 88888
Q ss_pred C-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccc-------hhhh---
Q 038533 98 G-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVV-------ETQL--- 165 (337)
Q Consensus 98 ~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~-------~~~~--- 165 (337)
+ + .|++||.++ ++..+. |........|.+++||| ++++|++|+.||+|++||+.++.. +.++
T Consensus 104 s~dg~V~iwd~~~----~l~~l~-~~~~~~~~sv~svafSP-DG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~ 177 (588)
T 2j04_A 104 SNNGNVSVFKDNK----MLTNLD-SKGNLSSRTYHCFEWNP-IESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLS 177 (588)
T ss_dssp ETTSCEEEEETTE----EEEECC-CSSCSTTTCEEEEEECS-SSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECS
T ss_pred eCCCcEEEEeCCc----eeeecc-CCCccccccEEEEEEcC-CCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecc
Confidence 7 5 999999543 555556 54211123699999999 999999999999999999988753 3454
Q ss_pred -hccCCceeEEEeCCCcEEEEEcCCCeEEEEECCCCCCce---eeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEE
Q 038533 166 -IAHDKEVYDICWGEARVFASVSADGSVRIFDLRDKEHST---IIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVI 241 (337)
Q Consensus 166 -~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i 241 (337)
.+|...|.+++|+|+. +++++.|+++++||+...+... .+.. .|...|.+++|+ +..|++++ ++. |++
T Consensus 178 ~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~--~h~~~V~svaFs---g~~LASa~-~~t-IkL 249 (588)
T 2j04_A 178 DAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQN--ASRRKITDLKIV---DYKVVLTC-PGY-VHK 249 (588)
T ss_dssp CTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEEC--CCSSCCCCEEEE---TTEEEEEC-SSE-EEE
T ss_pred cccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecc--cccCcEEEEEEE---CCEEEEEe-CCe-EEE
Confidence 5778899999999655 8999999999999998877421 2222 366899999998 48888887 566 999
Q ss_pred EECCCCCCCeEEeecccceeeEEEe--CCCCCCeEEEEcCCCcEEEEeCCCC---CCC-------------CCCCCCcee
Q 038533 242 LDIRSPTLPVAELERHRACVNAIAW--APQSRRHICSVGDDSQAFIWELPLP---PVA-------------GPNGIDPMS 303 (337)
Q Consensus 242 ~d~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~~~~~dg~i~iw~~~~~---~~~-------------~~~~~~~~~ 303 (337)
||+.. ........+|...+..++| +|++. .|++++.||+ ++|..+.- ... +..+. ...
T Consensus 250 Wd~~~-~~~~~~~~gh~~~V~~va~~~s~d~~-~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~-~l~ 325 (588)
T 2j04_A 250 IDLKN-YSISSLKTGSLENFHIIPLNHEKEST-ILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWN-EFN 325 (588)
T ss_dssp EETTT-TEEEEEECSCCSCCCEEEETTCSSCE-EEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTT-SSS
T ss_pred EECCC-CeEEEEEcCCCceEEEEEeeeCCCCC-EEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCC-cee
Confidence 99987 4332233379999999999 99998 9999999999 99997410 000 00011 111
Q ss_pred eeeCCCceeEEEEccCCCceEEEE
Q 038533 304 MYSAGSEINQLQWSPAQPDWLAIA 327 (337)
Q Consensus 304 ~~~~~~~v~~~~~~~~~~~l~~~~ 327 (337)
...+...|.+++|+|+|+.+++++
T Consensus 326 ~~~~~~~I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 326 NYETTLVIHGISLSPDGYSIAIVY 349 (588)
T ss_dssp SSCCEEEEEEEEECTTSSEEEEEE
T ss_pred eeccceEEEEEEECCCCCEEEEEE
Confidence 222345699999999998777665
No 123
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=3.2e-29 Score=218.13 Aligned_cols=259 Identities=10% Similarity=0.050 Sum_probs=199.0
Q ss_pred cceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeCC--eEEEEecCCCCcccee-----e
Q 038533 44 TNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSGD--FLRLWDVGDSSIEPVA-----V 116 (337)
Q Consensus 44 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~~--~v~vw~~~~~~~~~~~-----~ 116 (337)
++.+.||.++........... ......+.+++|+|++. +++++++ .|++||+.+++ ... .
T Consensus 98 ~~~~~l~~~d~~~~~~~~~~~--~~~~~~~~~~~~s~~~~---------~~~~~~~~~~i~~~d~~~g~--~~~~~~~~~ 164 (433)
T 3bws_A 98 ELNEKLIALDKEGITHRFISR--FKTGFQPKSVRFIDNTR---------LAIPLLEDEGMDVLDINSGQ--TVRLSPPEK 164 (433)
T ss_dssp GGTTCEEECCBTTCSEEEEEE--EECSSCBCCCEESSSSE---------EEEEBTTSSSEEEEETTTCC--EEEECCCHH
T ss_pred CCceEEEEECCCCCcceEEEE--EcCCCCceEEEEeCCCe---------EEEEeCCCCeEEEEECCCCe--EeeecCccc
Confidence 455577777764432222111 23445677999999665 8888774 89999999884 333 3
Q ss_pred ecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCceeEEEeC-CCcEE-EEEcCCCeEEE
Q 038533 117 LNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWG-EARVF-ASVSADGSVRI 194 (337)
Q Consensus 117 ~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~l-~~~~~dg~i~i 194 (337)
+.+|. ..|.+++|++ ++.++++++.|+.|++||+++++.+..+..|...+.+++|+ +++.+ ++++.++.|++
T Consensus 165 ~~~~~-----~~v~~~~~~~-~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~ 238 (433)
T 3bws_A 165 YKKKL-----GFVETISIPE-HNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISV 238 (433)
T ss_dssp HHTTC-----CEEEEEEEGG-GTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred ccccC-----CceeEEEEcC-CCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEE
Confidence 44666 8899999988 89999999999999999999998888888889999999999 66666 56668999999
Q ss_pred EECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEe--------cCCEEEEEECCCCCCCeEEeecccceeeEEEe
Q 038533 195 FDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILM--------DSNKVVILDIRSPTLPVAELERHRACVNAIAW 266 (337)
Q Consensus 195 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~--------d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~ 266 (337)
||+++++....+. ....+.+++|+| +++++++++. |+. |++||+++ ++.+..+ .|...+.+++|
T Consensus 239 ~d~~~~~~~~~~~----~~~~~~~~~~~~-~g~~l~~~~~~~~~~~~~dg~-i~~~d~~~-~~~~~~~-~~~~~~~~~~~ 310 (433)
T 3bws_A 239 IDRKTKLEIRKTD----KIGLPRGLLLSK-DGKELYIAQFSASNQESGGGR-LGIYSMDK-EKLIDTI-GPPGNKRHIVS 310 (433)
T ss_dssp EETTTTEEEEECC----CCSEEEEEEECT-TSSEEEEEEEESCTTCSCCEE-EEEEETTT-TEEEEEE-EEEECEEEEEE
T ss_pred EECCCCcEEEEec----CCCCceEEEEcC-CCCEEEEEECCCCccccCCCe-EEEEECCC-CcEEeec-cCCCCcceEEE
Confidence 9999876433322 235689999999 8988888884 556 99999987 4444444 45668899999
Q ss_pred CCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEc---------------CCc
Q 038533 267 APQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAF---------------SNK 331 (337)
Q Consensus 267 ~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------------d~~ 331 (337)
+|+++.++++++.|+.|++||+. + ........+...+.+++|+|+++.+++++. ||.
T Consensus 311 ~~~g~~l~~~~~~~~~v~v~d~~--~------~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~ 382 (433)
T 3bws_A 311 GNTENKIYVSDMCCSKIEVYDLK--E------KKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGK 382 (433)
T ss_dssp CSSTTEEEEEETTTTEEEEEETT--T------TEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCE
T ss_pred CCCCCEEEEEecCCCEEEEEECC--C------CcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceE
Confidence 99997566778999999999998 3 113344457788999999999988888775 569
Q ss_pred EEEEeC
Q 038533 332 MQLLKV 337 (337)
Q Consensus 332 i~iw~l 337 (337)
|++|++
T Consensus 383 v~~~d~ 388 (433)
T 3bws_A 383 VYVIDT 388 (433)
T ss_dssp EEEEET
T ss_pred EEEEEC
Confidence 999985
No 124
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=1.1e-29 Score=214.05 Aligned_cols=209 Identities=14% Similarity=0.242 Sum_probs=171.1
Q ss_pred eeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCcc----chhhhhccCCceeEEEeCC---CcEEEEE
Q 038533 114 VAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGV----VETQLIAHDKEVYDICWGE---ARVFASV 186 (337)
Q Consensus 114 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~----~~~~~~~~~~~v~~~~~~~---~~~l~~~ 186 (337)
...+.+|. ..|++++|+| ++++|++|+.||.|++||+.++. ....+.+|...|.+++|++ +++|+++
T Consensus 4 ~~~~~gH~-----~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~ 77 (351)
T 3f3f_A 4 QPFDSGHD-----DLVHDVVYDF-YGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASA 77 (351)
T ss_dssp CCEECCCS-----SCEEEEEECS-SSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEE
T ss_pred cccCcccc-----cceeEEEEcC-CCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEE
Confidence 34567887 9999999999 99999999999999999998763 5566678999999999994 8899999
Q ss_pred cCCCeEEEEECCCCCCc------eeeecCCCCCCCceEEEeecCC--CcEEEEEEecCCEEEEEECCCCCCCeEEee---
Q 038533 187 SADGSVRIFDLRDKEHS------TIIYESPQPDTPLLRLAWNKQD--LRYMATILMDSNKVVILDIRSPTLPVAELE--- 255 (337)
Q Consensus 187 ~~dg~i~iwd~~~~~~~------~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~--- 255 (337)
+.||.|++||++.++.. ........|...+.+++|+| + +.+|++++.|+. |++||+++.. .+..+.
T Consensus 78 ~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~dg~-v~iwd~~~~~-~~~~~~~~~ 154 (351)
T 3f3f_A 78 SYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAP-AHLGLKLACLGNDGI-LRLYDALEPS-DLRSWTLTS 154 (351)
T ss_dssp ETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTCE-EEEEECSSTT-CTTCCEEEE
T ss_pred cCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcC-CCCCcEEEEecCCCc-EEEecCCChH-Hhccccccc
Confidence 99999999999886421 22333335788999999999 7 999999999998 9999998743 232222
Q ss_pred ----------cccceeeEEEeCCC---CCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCC--
Q 038533 256 ----------RHRACVNAIAWAPQ---SRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQ-- 320 (337)
Q Consensus 256 ----------~~~~~v~~~~~~~~---~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-- 320 (337)
.|...+.+++|+|+ +. ++++++.|+.+.+|+...... .....+.+|...|.+++|+|++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~h~~~i~~~~~~p~~~~ 228 (351)
T 3f3f_A 155 EMKVLSIPPANHLQSDFCLSWCPSRFSPE-KLAVSALEQAIIYQRGKDGKL-----HVAAKLPGHKSLIRSISWAPSIGR 228 (351)
T ss_dssp EEESCSCCCSSCSCCCEEEEECCCSSSCC-EEEEEETTEEEEEEECTTSCE-----EEEEECCCCCSCEEEEEECCCSSC
T ss_pred cccccccccCCcccceeEEEeccCCCCCc-EEEEecCCCcEEEEccCCCce-----eeeeecCCCCcceeEEEECCCCCC
Confidence 57778999999997 66 999999999998887762210 1123555799999999999998
Q ss_pred --CceEEEEcCCcEEEEeC
Q 038533 321 --PDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 321 --~~l~~~~~d~~i~iw~l 337 (337)
..|++++.||.|++|++
T Consensus 229 ~~~~l~s~~~dg~i~iwd~ 247 (351)
T 3f3f_A 229 WYQLIATGCKDGRIRIFKI 247 (351)
T ss_dssp SSEEEEEEETTSCEEEEEE
T ss_pred cceEEEEEcCCCeEEEEeC
Confidence 68899999999999985
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=6.1e-28 Score=207.24 Aligned_cols=241 Identities=10% Similarity=0.101 Sum_probs=187.1
Q ss_pred cceeeeeCCCceeEEEEe--cceE-EEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcC
Q 038533 13 ENSVTHESPYPLYAMAVC--GQRI-AVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSS 89 (337)
Q Consensus 13 ~~~~~~~~~~~v~~~~~s--~~~l-a~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~ 89 (337)
+.+..+.+...+.+++|+ +++| ++++. ++.|++|++........ ..+...+.+++|+|+++
T Consensus 23 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~----d~~i~v~d~~~~~~~~~------~~~~~~v~~~~~spdg~------ 86 (391)
T 1l0q_A 23 KVTATIPVGSNPMGAVISPDGTKVYVANAH----SNDVSIIDTATNNVIAT------VPAGSSPQGVAVSPDGK------ 86 (391)
T ss_dssp EEEEEEECSSSEEEEEECTTSSEEEEEEGG----GTEEEEEETTTTEEEEE------EECSSSEEEEEECTTSS------
T ss_pred eEEEEeecCCCcceEEECCCCCEEEEECCC----CCeEEEEECCCCeEEEE------EECCCCccceEECCCCC------
Confidence 345556666779999999 6666 55655 99999998865443222 23344899999999998
Q ss_pred CccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeE-EEeeCCCcEEEEeCCCccchhhhh
Q 038533 90 NRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRI-GTCSIDTTCTIWDIEKGVVETQLI 166 (337)
Q Consensus 90 ~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l-~~~~~dg~i~v~d~~~~~~~~~~~ 166 (337)
.++++++ + .|++||+.++ +....+..+ ..+.+++|+| +++.+ ++++.++.|++||+.+++.+..+.
T Consensus 87 --~l~~~~~~~~~v~v~d~~~~--~~~~~~~~~------~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 155 (391)
T 1l0q_A 87 --QVYVTNMASSTLSVIDTTSN--TVAGTVKTG------KSPLGLALSP-DGKKLYVTNNGDKTVSVINTVTKAVINTVS 155 (391)
T ss_dssp --EEEEEETTTTEEEEEETTTT--EEEEEEECS------SSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred --EEEEEECCCCEEEEEECCCC--eEEEEEeCC------CCcceEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEe
Confidence 3445555 4 9999999998 556666654 5689999999 88866 788889999999999998877776
Q ss_pred ccCCceeEEEeC-CCcEE-EEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEE---ecCCEEEE
Q 038533 167 AHDKEVYDICWG-EARVF-ASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATIL---MDSNKVVI 241 (337)
Q Consensus 167 ~~~~~v~~~~~~-~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~---~d~~~i~i 241 (337)
.+ ..+.+++|+ +++.+ ++++.++.|++||+++++....+. +...+.+++|+| +++++++++ .++. |++
T Consensus 156 ~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~----~~~~~~~~~~~~-~g~~l~~~~~~~~~~~-v~~ 228 (391)
T 1l0q_A 156 VG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK----VEAAPSGIAVNP-EGTKAYVTNVDKYFNT-VSM 228 (391)
T ss_dssp CC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE----CSSEEEEEEECT-TSSEEEEEEECSSCCE-EEE
T ss_pred cC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe----cCCCccceEECC-CCCEEEEEecCcCCCc-EEE
Confidence 55 457999999 67666 678889999999999887544443 246789999999 898888888 4666 999
Q ss_pred EECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCC
Q 038533 242 LDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 242 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 289 (337)
||+++ .+++..+..|. .+.+++|+|+++.++++++.|+.|++||+.
T Consensus 229 ~d~~~-~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~ 274 (391)
T 1l0q_A 229 IDTGT-NKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTA 274 (391)
T ss_dssp EETTT-TEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred EECCC-CeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECC
Confidence 99987 55667777654 578999999998344788899999999998
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=1.3e-27 Score=195.08 Aligned_cols=184 Identities=15% Similarity=0.194 Sum_probs=139.3
Q ss_pred EEEEeC---C-eEEEEecCC-CCccceeeecCCCCCcccCCeeEEEeecC--CCCeEEEeeCCCcEEEEeCCCccchhhh
Q 038533 93 LLASSG---D-FLRLWDVGD-SSIEPVAVLNNSKSSEFCAPLTSFDWNEI--EPKRIGTCSIDTTCTIWDIEKGVVETQL 165 (337)
Q Consensus 93 ~l~~~~---~-~v~vw~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~l~~~~~dg~i~v~d~~~~~~~~~~ 165 (337)
++.+++ + .|++|++.. + +.+..+.+|. ..+..++|++. ++.+|++|+.|++|+|||+++++.++++
T Consensus 147 lv~ss~~g~d~~V~~~~~s~dG--~~~~s~~~~~-----~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL 219 (356)
T 2w18_A 147 LVSSSGTLSDQQVEVMTFAEDG--GGKENQFLMP-----PEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKM 219 (356)
T ss_dssp EEEEESSSTTCEEEEEEECTTS--CEEEEEEECC-----CSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEEecccCCCCcEEEEEECCCC--ceeeeeccCC-----CceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEE
Confidence 777754 5 999999954 5 4566666776 77777787763 6689999999999999999999999998
Q ss_pred hccCC---ceeEEEeC-CCcEE------------EEEcCCCeEEEEECCCCCCceeeec--CCCCCCCceEEEeecCCCc
Q 038533 166 IAHDK---EVYDICWG-EARVF------------ASVSADGSVRIFDLRDKEHSTIIYE--SPQPDTPLLRLAWNKQDLR 227 (337)
Q Consensus 166 ~~~~~---~v~~~~~~-~~~~l------------~~~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~ 227 (337)
.+|.. .+.+++|+ ++.++ ++|+.|++|++||..+++....... ..+|...+.+..+ ++.
T Consensus 220 ~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~---sg~ 296 (356)
T 2w18_A 220 HIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV---KDH 296 (356)
T ss_dssp ECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE---ETT
T ss_pred cCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc---CCC
Confidence 76543 56677899 67665 6688899999999998875443321 1234444444444 477
Q ss_pred EEEEEEecCCEEEEEECCCCCCCeEEeecccceee-EEEeCCCCCCeEEEEcCCCcEEEEeCC
Q 038533 228 YMATILMDSNKVVILDIRSPTLPVAELERHRACVN-AIAWAPQSRRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 228 ~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~dg~i~iw~~~ 289 (337)
++++++.|+. |+|||+++ ++.+.++.+|...+. .++|+|+|+ +|++|+.|++|+|||+.
T Consensus 297 ~lASgS~DgT-IkIWDl~t-Gk~l~tL~gH~~~vvs~vafSPDG~-~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 297 CAAAILTSGT-IAIWDLLL-GQCTALLPPVSDQHWSFVKWSGTDS-HLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp EEEEEETTSC-EEEEETTT-CSEEEEECCC--CCCCEEEECSSSS-EEEEECTTSCEEEEEEC
T ss_pred EEEEEcCCCc-EEEEECCC-CcEEEEecCCCCCeEEEEEECCCCC-EEEEEECCCcEEEecCC
Confidence 8999999998 99999998 778889998887655 589999999 99999999999999963
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=1.9e-27 Score=205.43 Aligned_cols=278 Identities=13% Similarity=0.119 Sum_probs=202.7
Q ss_pred CceeEEEEe---cceEEEeeeeccCcc----eEEEEEe--cCCCcceecCCCcCCCCCCCCeEEEecCC-----------
Q 038533 22 YPLYAMAVC---GQRIAVGSFIEDYTN----RVDVVSF--EPESLSIKTHPSLSFDHPYPPTKLMFDPN----------- 81 (337)
Q Consensus 22 ~~v~~~~~s---~~~la~g~~~~~~d~----~i~i~~~--~~~~~~~~~~~~~~~~~~~~i~~i~~~~~----------- 81 (337)
..+...+|. .+++++|+.....+| .++|||+ ......... .+ ..|...+..+++++.
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~d~~~~~~~g~~ 139 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQN--SY-KVNKQWLRYAGHTASDEVFEKLTGIK 139 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEE--EE-EECGGGHHHHHHHHHHHHHHHHHSSC
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeee--EE-EcChhHHHHHHHHHHHHHHHHHcCCC
Confidence 467777887 467778875333466 9999999 554432221 12 567777777777651
Q ss_pred ---CCcccCcCCccEEEEeC-------CeEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCC--
Q 038533 82 ---SSSRKSSSNRHLLASSG-------DFLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDT-- 149 (337)
Q Consensus 82 ---~~~~~~~~~~~~l~~~~-------~~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg-- 149 (337)
+. .++.++. ..|++||+... ....+..|. ..+.+++|+| +++.|++++.++
T Consensus 140 ~~~~~--------~l~~~s~~~~~~~~~~i~i~d~~g~---~~~~l~~~~-----~~v~~~~~Sp-dg~~la~~s~~~~~ 202 (415)
T 2hqs_A 140 GAFRT--------RIAYVVQTNGGQFPYELRVSDYDGY---NQFVVHRSP-----QPLMSPAWSP-DGSKLAYVTFESGR 202 (415)
T ss_dssp CCTTC--------EEEEEEECSSSSCCEEEEEEETTSC---SCEEEEEES-----SCEEEEEECT-TSSEEEEEECTTSS
T ss_pred CcCCC--------EEEEEEecCCCCccceEEEEcCCCC---CCEEEeCCC-----CcceeeEEcC-CCCEEEEEEecCCC
Confidence 22 2444332 28999999864 345666676 8899999999 999999999875
Q ss_pred -cEEEEeCCCccchhhhhccCCceeEEEeC-CCcEEE-EEcCCCe--EEEEECCCCCCceeeecCCCCCCCceEEEeecC
Q 038533 150 -TCTIWDIEKGVVETQLIAHDKEVYDICWG-EARVFA-SVSADGS--VRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQ 224 (337)
Q Consensus 150 -~i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~-~~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 224 (337)
.|++||+++++.. .+..|...+.+++|+ +++.|+ +++.++. |++||+++++.. .+ ..+...+.+++|+|
T Consensus 203 ~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~-~l---~~~~~~~~~~~~sp- 276 (415)
T 2hqs_A 203 SALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR-QV---TDGRSNNTEPTWFP- 276 (415)
T ss_dssp CEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EC---CCCSSCEEEEEECT-
T ss_pred cEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE-eC---cCCCCcccceEECC-
Confidence 9999999988764 456678889999999 788777 6666654 999999887642 22 23557899999999
Q ss_pred CCcEEEEEEecCC--EEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCC---CcEEEEeCCCCCCCCCCCC
Q 038533 225 DLRYMATILMDSN--KVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDD---SQAFIWELPLPPVAGPNGI 299 (337)
Q Consensus 225 ~~~~l~~~~~d~~--~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~~ 299 (337)
++++|++++.++. .|++||+.+ +. ...+..+...+.+++|+|+|+ +|++++.+ +.|.+||+..+.
T Consensus 277 dg~~l~~~s~~~g~~~i~~~d~~~-~~-~~~l~~~~~~~~~~~~spdG~-~l~~~~~~~g~~~i~~~d~~~~~------- 346 (415)
T 2hqs_A 277 DSQNLAFTSDQAGRPQVYKVNING-GA-PQRITWEGSQNQDADVSSDGK-FMVMVSSNGGQQHIAKQDLATGG------- 346 (415)
T ss_dssp TSSEEEEEECTTSSCEEEEEETTS-SC-CEECCCSSSEEEEEEECTTSS-EEEEEEECSSCEEEEEEETTTCC-------
T ss_pred CCCEEEEEECCCCCcEEEEEECCC-CC-EEEEecCCCcccCeEECCCCC-EEEEEECcCCceEEEEEECCCCC-------
Confidence 9999888886432 488889876 33 445556777899999999999 77777654 589999998222
Q ss_pred CceeeeeCCCceeEEEEccCCCceEEEEcCC---cEEEEeC
Q 038533 300 DPMSMYSAGSEINQLQWSPAQPDWLAIAFSN---KMQLLKV 337 (337)
Q Consensus 300 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~i~iw~l 337 (337)
...+..+. .+.+++|+|+|+.|+.++.++ .|.+|++
T Consensus 347 -~~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~ 385 (415)
T 2hqs_A 347 -VQVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVST 385 (415)
T ss_dssp -EEECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred -EEEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEEC
Confidence 23344443 899999999999888888766 7888874
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=2.5e-25 Score=192.27 Aligned_cols=248 Identities=13% Similarity=0.121 Sum_probs=186.9
Q ss_pred cceEEEeeeeccCc---ceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C----eEE
Q 038533 31 GQRIAVGSFIEDYT---NRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D----FLR 102 (337)
Q Consensus 31 ~~~la~g~~~~~~d---~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~----~v~ 102 (337)
+..|+.++... .+ +.|++|+++..... . ...|...+.+++|+|+++ .|++++ + .|+
T Consensus 143 ~~~l~~~s~~~-~~~~~~~i~i~d~~g~~~~-~-----l~~~~~~v~~~~~Spdg~---------~la~~s~~~~~~~i~ 206 (415)
T 2hqs_A 143 RTRIAYVVQTN-GGQFPYELRVSDYDGYNQF-V-----VHRSPQPLMSPAWSPDGS---------KLAYVTFESGRSALV 206 (415)
T ss_dssp TCEEEEEEECS-SSSCCEEEEEEETTSCSCE-E-----EEEESSCEEEEEECTTSS---------EEEEEECTTSSCEEE
T ss_pred CCEEEEEEecC-CCCccceEEEEcCCCCCCE-E-----EeCCCCcceeeEEcCCCC---------EEEEEEecCCCcEEE
Confidence 44677776511 12 79999998743322 2 257888999999999999 777765 2 899
Q ss_pred EEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEE-EeeCCCc--EEEEeCCCccchhhhhccCCceeEEEeC-
Q 038533 103 LWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIG-TCSIDTT--CTIWDIEKGVVETQLIAHDKEVYDICWG- 178 (337)
Q Consensus 103 vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~-~~~~dg~--i~v~d~~~~~~~~~~~~~~~~v~~~~~~- 178 (337)
+||+.+++ . ..+..|. ..+.+++|+| +++.|+ +++.++. |++||+++++. ..+..|...+.+++|+
T Consensus 207 ~~d~~tg~--~-~~l~~~~-----~~~~~~~~sp-dg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~sp 276 (415)
T 2hqs_A 207 IQTLANGA--V-RQVASFP-----RHNGAPAFSP-DGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFP 276 (415)
T ss_dssp EEETTTCC--E-EEEECCS-----SCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECT
T ss_pred EEECCCCc--E-EEeecCC-----CcccCEEEcC-CCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECC
Confidence 99999884 3 2455665 7899999999 898777 6666655 99999988765 5566788889999999
Q ss_pred CCcEEEEEcC-CC--eEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecC--CEEEEEECCCCCCCeEE
Q 038533 179 EARVFASVSA-DG--SVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS--NKVVILDIRSPTLPVAE 253 (337)
Q Consensus 179 ~~~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~--~~i~i~d~~~~~~~~~~ 253 (337)
+++.|++++. ++ .|.+||+.+++..... .+...+.+++|+| ++++|++++.++ ..|++||+.+ ++ ...
T Consensus 277 dg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~----~~~~~~~~~~~sp-dG~~l~~~~~~~g~~~i~~~d~~~-~~-~~~ 349 (415)
T 2hqs_A 277 DSQNLAFTSDQAGRPQVYKVNINGGAPQRIT----WEGSQNQDADVSS-DGKFMVMVSSNGGQQHIAKQDLAT-GG-VQV 349 (415)
T ss_dssp TSSEEEEEECTTSSCEEEEEETTSSCCEECC----CSSSEEEEEEECT-TSSEEEEEEECSSCEEEEEEETTT-CC-EEE
T ss_pred CCCEEEEEECCCCCcEEEEEECCCCCEEEEe----cCCCcccCeEECC-CCCEEEEEECcCCceEEEEEECCC-CC-EEE
Confidence 7888888776 44 6888898887633221 2346788999999 999999888752 2499999987 33 345
Q ss_pred eecccceeeEEEeCCCCCCeEEEEcCCC---cEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCC
Q 038533 254 LERHRACVNAIAWAPQSRRHICSVGDDS---QAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQP 321 (337)
Q Consensus 254 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg---~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 321 (337)
+..+. .+.+++|+|+|+ +|++++.++ .|++||+. . .....+..|.+.|.+++|+|...
T Consensus 350 l~~~~-~~~~~~~spdg~-~l~~~s~~~~~~~l~~~d~~--g------~~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 350 LSSTF-LDETPSLAPNGT-MVIYSSSQGMGSVLNLVSTD--G------RFKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp CCCSS-SCEEEEECTTSS-EEEEEEEETTEEEEEEEETT--S------CCEEECCCSSSEEEEEEECCCCC
T ss_pred ecCCC-CcCCeEEcCCCC-EEEEEEcCCCccEEEEEECC--C------CcEEEeeCCCCCCcCCccccccc
Confidence 55554 889999999999 888877766 79999987 2 23556778899999999999753
No 129
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.95 E-value=2.2e-25 Score=187.60 Aligned_cols=268 Identities=10% Similarity=0.113 Sum_probs=180.8
Q ss_pred cceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C--eEEEEecC--CCCccceeeec
Q 038533 44 TNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D--FLRLWDVG--DSSIEPVAVLN 118 (337)
Q Consensus 44 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~--~v~vw~~~--~~~~~~~~~~~ 118 (337)
++.|++|+++... .... .....+...+.+++|+|+++ +|++++ + .|.+|++. +++.+.+..+.
T Consensus 14 ~~~v~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~spdg~---------~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 81 (343)
T 1ri6_A 14 SQQIHVWNLNHEG-ALTL--TQVVDVPGQVQPMVVSPDKR---------YLYVGVRPEFRVLAYRIAPDDGALTFAAESA 81 (343)
T ss_dssp GTEEEEEEECTTS-CEEE--EEEEECSSCCCCEEECTTSS---------EEEEEETTTTEEEEEEECTTTCCEEEEEEEE
T ss_pred CCeEEEEEECCCC-cEEE--eeeEecCCCCceEEECCCCC---------EEEEeecCCCeEEEEEecCCCCceeeccccc
Confidence 9999999997522 2111 01246778899999999998 555554 3 99999998 55544555555
Q ss_pred CCCCCcccCCeeEEEeecCCCCeEEEee-CCCcEEEEeCC---CccchhhhhccCCceeEEEeC-CCcEEEEEc-CCCeE
Q 038533 119 NSKSSEFCAPLTSFDWNEIEPKRIGTCS-IDTTCTIWDIE---KGVVETQLIAHDKEVYDICWG-EARVFASVS-ADGSV 192 (337)
Q Consensus 119 ~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~dg~i~v~d~~---~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~-~dg~i 192 (337)
.+ ..+..++|+| +++++++++ .++.|.+||+. ..+.+..+.. ...+.+++|+ +++.+++++ .++.|
T Consensus 82 ~~------~~~~~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v 153 (343)
T 1ri6_A 82 LP------GSLTHISTDH-QGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRI 153 (343)
T ss_dssp CS------SCCSEEEECT-TSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEE
T ss_pred cC------CCCcEEEEcC-CCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEE
Confidence 43 4678999999 888776665 48899999994 3344444443 3458899999 677777766 89999
Q ss_pred EEEECCC-CCCceee--ecCCCCCCCceEEEeecCCCcEEEEEE-ecCCEEEEEECCCC-CCC--eEEee----cc--cc
Q 038533 193 RIFDLRD-KEHSTII--YESPQPDTPLLRLAWNKQDLRYMATIL-MDSNKVVILDIRSP-TLP--VAELE----RH--RA 259 (337)
Q Consensus 193 ~iwd~~~-~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~l~~~~-~d~~~i~i~d~~~~-~~~--~~~~~----~~--~~ 259 (337)
.+||+.+ ++..... .........+..++|+| +++++++++ .++. |.+||+... +.. ..... .+ ..
T Consensus 154 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-dg~~l~~~~~~~~~-i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 231 (343)
T 1ri6_A 154 CLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHP-NEQYAYCVNELNSS-VDVWELKDPHGNIECVQTLDMMPENFSDTR 231 (343)
T ss_dssp EEEEECTTSCEEEEEEEEEECSTTCCEEEEEECT-TSSEEEEEETTTTE-EEEEESSCTTSCCEEEEEEECSCTTCCSCC
T ss_pred EEEEecCCCceeeecccccccCCCCCcceEEECC-CCCEEEEEeCCCCE-EEEEEecCCCCcEEEEeeccccCccccccC
Confidence 9999987 4422211 11111235788899999 888777666 4555 999999642 222 12221 11 23
Q ss_pred eeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEE-cCCcEEEEeC
Q 038533 260 CVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIA-FSNKMQLLKV 337 (337)
Q Consensus 260 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iw~l 337 (337)
.+..++|+|+++.+++++..++.|.+|++.... . .............+..++|+|+++.|++++ .++.+.+|++
T Consensus 232 ~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~--~--~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~ 306 (343)
T 1ri6_A 232 WAADIHITPDGRHLYACDRTASLITVFSVSEDG--S--VLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEI 306 (343)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTS--C--CEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEE
T ss_pred CccceEECCCCCEEEEEecCCCEEEEEEEcCCC--C--ceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEE
Confidence 466899999998344466689999999998211 1 001222222233489999999999888887 5899999953
No 130
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.95 E-value=3.6e-26 Score=188.18 Aligned_cols=254 Identities=11% Similarity=0.133 Sum_probs=184.4
Q ss_pred CcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeCC-eEEEEecCC-CCccceeeecCC
Q 038533 43 YTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSGD-FLRLWDVGD-SSIEPVAVLNNS 120 (337)
Q Consensus 43 ~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~~-~v~vw~~~~-~~~~~~~~~~~~ 120 (337)
.++.|.+|++........ ..|...|.+++|+|+++ +|+++++ .|.+||+.+ ++ .......+
T Consensus 20 ~~~~i~~~d~~~~~~~~~------~~~~~~v~~~~~spdg~---------~l~~~~~~~i~~~d~~~~~~--~~~~~~~~ 82 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVV------WQTPELFEAPNWSPDGK---------YLLLNSEGLLYRLSLAGDPS--PEKVDTGF 82 (297)
T ss_dssp CCEEEEEEETTTTEEEEE------EEESSCCEEEEECTTSS---------EEEEEETTEEEEEESSSCCS--CEECCCTT
T ss_pred cceeEEEEeCCCCceeee------ccCCcceEeeEECCCCC---------EEEEEcCCeEEEEeCCCCCC--ceEecccc
Confidence 489999998865443322 46888999999999999 8888877 999999998 73 44444443
Q ss_pred CCCcccCCeeEEEeecCCCCeEEEee--CCCcEEEE--eCCCccchhhhhccCCceeEEEeC-CCcEEE-EEcCCCeEEE
Q 038533 121 KSSEFCAPLTSFDWNEIEPKRIGTCS--IDTTCTIW--DIEKGVVETQLIAHDKEVYDICWG-EARVFA-SVSADGSVRI 194 (337)
Q Consensus 121 ~~~~~~~~i~~~~~~~~~~~~l~~~~--~dg~i~v~--d~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~-~~~~dg~i~i 194 (337)
. ...+.+++|+| ++++|++++ .++...+| ++.+++ ...+..+ ..+..++|+ +++.++ +++.++.+++
T Consensus 83 ~----~~~~~~~~~sp-dg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l 155 (297)
T 2ojh_A 83 A----TICNNDHGISP-DGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDI 155 (297)
T ss_dssp C----CCBCSCCEECT-TSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEE
T ss_pred c----cccccceEECC-CCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEE
Confidence 1 15688999999 999999998 33445555 544444 3334333 348889999 677666 7888999999
Q ss_pred EECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEe-cCCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCe
Q 038533 195 FDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILM-DSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRH 273 (337)
Q Consensus 195 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 273 (337)
|+++........ ...+...+.+++|+| ++++|++++. ++. +++|++......+..+..|...+..++|+|+++ +
T Consensus 156 ~~~~~~~~~~~~--~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~ 230 (297)
T 2ojh_A 156 YSMDIDSGVETR--LTHGEGRNDGPDYSP-DGRWIYFNSSRTGQ-MQIWRVRVDGSSVERITDSAYGDWFPHPSPSGD-K 230 (297)
T ss_dssp EEEETTTCCEEE--CCCSSSCEEEEEECT-TSSEEEEEECTTSS-CEEEEEETTSSCEEECCCCSEEEEEEEECTTSS-E
T ss_pred EEEECCCCcceE--cccCCCccccceECC-CCCEEEEEecCCCC-ccEEEECCCCCCcEEEecCCcccCCeEECCCCC-E
Confidence 996533211121 123457899999999 8888887764 666 999988744556777877888899999999999 7
Q ss_pred EEEEcCC-----------CcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEcCC
Q 038533 274 ICSVGDD-----------SQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSN 330 (337)
Q Consensus 274 l~~~~~d-----------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 330 (337)
|++++.+ +.|.+||+..++. .......+|...+..++|+|+++.|++++.+.
T Consensus 231 l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-----~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 231 VVFVSYDADVFDHPRDLDVRVQLMDMDGGNV-----ETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEEEETTCCSCCSSEEEEEEEEETTSCSC-----EEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EEEEEcCCCCCcccccCceEEEEEecCCCCc-----eeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 8777765 5699999983221 11223447888999999999999888877653
No 131
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.95 E-value=3.6e-25 Score=186.97 Aligned_cols=282 Identities=10% Similarity=0.123 Sum_probs=191.4
Q ss_pred ceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC---C-eEEEEecC
Q 038533 32 QRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG---D-FLRLWDVG 107 (337)
Q Consensus 32 ~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~---~-~v~vw~~~ 107 (337)
+.+++|+...+.++.|.+|.++..++.+.... ...+...+..++|+|+++ +++++. + .|.+|++.
T Consensus 3 ~~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~--~~~~~~~p~~~a~spdg~---------l~~~~~~~~~~~v~~~~~~ 71 (347)
T 3hfq_A 3 ERILFGTYTKKTSQGIYQGTLDTTAKTLTNDG--LLAATQNPTYLALSAKDC---------LYSVDKEDDEGGIAAWQID 71 (347)
T ss_dssp EEEEEEECCSSSCCEEEEEEEETTTTEEEEEE--EEEECSCCCCEEECTTCE---------EEEEEEETTEEEEEEEEEE
T ss_pred cEEEEEeccCCCCCCEEEEEEcCCCCeEEEee--eeeccCCcceEEEccCCe---------EEEEEecCCCceEEEEEec
Confidence 45677765444577899999998776554311 134556788899999997 776654 3 99999998
Q ss_pred CCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEee-CCCcEEEEeCCC-cc--chhhhhc---------cCCceeE
Q 038533 108 DSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCS-IDTTCTIWDIEK-GV--VETQLIA---------HDKEVYD 174 (337)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~dg~i~v~d~~~-~~--~~~~~~~---------~~~~v~~ 174 (337)
+++.+.+..+..+. ..+..++|+| ++++|++++ .++.|.+|++.. +. .+..+.. +...+.+
T Consensus 72 ~g~~~~~~~~~~~~-----~~p~~~a~sp-dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~ 145 (347)
T 3hfq_A 72 GQTAHKLNTVVAPG-----TPPAYVAVDE-ARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHY 145 (347)
T ss_dssp TTEEEEEEEEEEES-----CCCSEEEEET-TTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEE
T ss_pred CCcEEEeeeeecCC-----CCCEEEEECC-CCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceE
Confidence 77544555544444 6788999999 999888877 789999999963 22 2222211 1234788
Q ss_pred EEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeec-CCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCC-CC--
Q 038533 175 ICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYE-SPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSP-TL-- 249 (337)
Q Consensus 175 ~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~-~~-- 249 (337)
++|+ +++++++...++.|.+||+........... ..........++|+| +++++++++.....|.+|++... +.
T Consensus 146 ~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~~~g~~~ 224 (347)
T 3hfq_A 146 TDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSP-DGQYAFLAGELSSQIASLKYDTQTGAFT 224 (347)
T ss_dssp EEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEEETTTTEEE
T ss_pred EEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECC-CCCEEEEEeCCCCEEEEEEecCCCCceE
Confidence 9999 677777777789999999983322222111 111234678899999 99977776655545999998752 21
Q ss_pred CeEEeeccc------ceeeEEEeCCCCCCeE-EEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCc
Q 038533 250 PVAELERHR------ACVNAIAWAPQSRRHI-CSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPD 322 (337)
Q Consensus 250 ~~~~~~~~~------~~v~~~~~~~~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 322 (337)
.+..+.... ..+..++|+|+|+ +| ++...++.|.+|++. .... .........+...+..++|+|++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~i~~spdG~-~l~v~~~~~~~v~v~~~~--~~g~--~~~~~~~~~~~~~~~~~~~spdg~~ 299 (347)
T 3hfq_A 225 QLGIVKTIPADYTAHNGAAAIRLSHDGH-FLYVSNRGYNTLAVFAVT--ADGH--LTLIQQISTEGDFPRDFDLDPTEAF 299 (347)
T ss_dssp EEEEEESSCTTCCSCCEEEEEEECTTSC-EEEEEEETTTEEEEEEEC--GGGC--EEEEEEEECSSSCCCEEEECTTSSE
T ss_pred EeeeeeecCCCCCCCCcceeEEECCCCC-EEEEEeCCCCEEEEEEEC--CCCc--EEEeEEEecCCCCcCeEEECCCCCE
Confidence 122222222 3578899999999 55 566678999999997 2111 0111233345567899999999998
Q ss_pred eEEEEc-CCcEEEEe
Q 038533 323 WLAIAF-SNKMQLLK 336 (337)
Q Consensus 323 l~~~~~-d~~i~iw~ 336 (337)
|++++. ++.+.+|+
T Consensus 300 l~v~~~~~~~v~v~~ 314 (347)
T 3hfq_A 300 VVVVNQNTDNATLYA 314 (347)
T ss_dssp EEEEETTTTEEEEEE
T ss_pred EEEEEcCCCcEEEEE
Confidence 888875 48999995
No 132
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=2.6e-25 Score=206.32 Aligned_cols=283 Identities=11% Similarity=0.074 Sum_probs=203.7
Q ss_pred CCceeEEEEe--cceEEEeeeeccCcc-----eEEEEEecCCCcceecCCCcCCCCC----------------------C
Q 038533 21 PYPLYAMAVC--GQRIAVGSFIEDYTN-----RVDVVSFEPESLSIKTHPSLSFDHP----------------------Y 71 (337)
Q Consensus 21 ~~~v~~~~~s--~~~la~g~~~~~~d~-----~i~i~~~~~~~~~~~~~~~~~~~~~----------------------~ 71 (337)
...+.+++|+ |++||+++. .++ .|.+|+.+........ .. ..+. .
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~---~d~~~~~~~i~~~d~~~g~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRG---KDSDRNQLDLWSYDIGSGQTRLLV--DS-KVVLPGTETLSDEEKARRERQRIAAMT 109 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEEC---CSSCTTEEEEEEEETTTCCEEEEE--CG-GGTC--------------------CCE
T ss_pred CCCCCCceEecCCCEEEEEec---cCCCCcccEEEEEECCCCceeEcc--ch-hhcccccccccchhhhhhhhhhhcccc
Confidence 4569999999 899999883 145 7888887655432222 00 1111 2
Q ss_pred CCeEEEecCCCCcccCcCCccEEEEeCC-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCc
Q 038533 72 PPTKLMFDPNSSSRKSSSNRHLLASSGD-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTT 150 (337)
Q Consensus 72 ~i~~i~~~~~~~~~~~~~~~~~l~~~~~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~ 150 (337)
.|.+++|+||++ +|+++++ .|.+||+.++.......+..+. ..+..++|+| ++++|+.++ ++.
T Consensus 110 ~v~~~~~SpDg~---------~l~~~~~~~i~~~d~~~~~~~~~~~l~~~~-----~~~~~~~~SP-DG~~la~~~-~~~ 173 (741)
T 2ecf_A 110 GIVDYQWSPDAQ---------RLLFPLGGELYLYDLKQEGKAAVRQLTHGE-----GFATDAKLSP-KGGFVSFIR-GRN 173 (741)
T ss_dssp ESCCCEECTTSS---------EEEEEETTEEEEEESSSCSTTSCCBCCCSS-----SCEEEEEECT-TSSEEEEEE-TTE
T ss_pred CcceeEECCCCC---------EEEEEeCCcEEEEECCCCCcceEEEcccCC-----cccccccCCC-CCCEEEEEe-CCc
Confidence 388999999999 8888876 9999999887100233455555 7899999999 999999987 469
Q ss_pred EEEEeCCCccchhhhhccCCc----------------eeEEEeC-CCcEEEEEcCCC-----------------------
Q 038533 151 CTIWDIEKGVVETQLIAHDKE----------------VYDICWG-EARVFASVSADG----------------------- 190 (337)
Q Consensus 151 i~v~d~~~~~~~~~~~~~~~~----------------v~~~~~~-~~~~l~~~~~dg----------------------- 190 (337)
|++||+.+++.......+... +.+++|+ ++++|++++.|+
T Consensus 174 i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~ 253 (741)
T 2ecf_A 174 LWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRY 253 (741)
T ss_dssp EEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEEC
T ss_pred EEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeec
Confidence 999999887755444333322 4789999 789999887765
Q ss_pred ----------eEEEEECCC-CCCceeeecCCCCCCCceEEEeecCCCcEEEEEEec----CCEEEEEECCCCCCCeEEee
Q 038533 191 ----------SVRIFDLRD-KEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMD----SNKVVILDIRSPTLPVAELE 255 (337)
Q Consensus 191 ----------~i~iwd~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d----~~~i~i~d~~~~~~~~~~~~ 255 (337)
.|.+||+.+ ++...... ...+...+..++| | ++++|++++.+ ...|++||+.+ ++....+.
T Consensus 254 ~~~g~~~~~~~l~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~-p-Dg~~l~~~~~~~~~~~~~i~~~d~~~-g~~~~~~~ 329 (741)
T 2ecf_A 254 PAAGDANVQVKLGVISPAEQAQTQWIDL-GKEQDIYLARVNW-R-DPQHLSFQRQSRDQKKLDLVEVTLAS-NQQRVLAH 329 (741)
T ss_dssp CBTTSCCCEEEEEEECSSTTCCCEEECC-CSCSSEEEEEEEE-E-ETTEEEEEEEETTSSEEEEEEEETTT-CCEEEEEE
T ss_pred CCCCCCCCeeEEEEEECCCCCceEEecC-CCCcceEEEEEEe-C-CCCEEEEEEecccCCeEEEEEEECCC-CceEEEEE
Confidence 789999988 76433322 1235577899999 9 99999887652 12499999987 44455554
Q ss_pred cccc----eeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEE-EEccCCCceEEEEc-C
Q 038533 256 RHRA----CVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQL-QWSPAQPDWLAIAF-S 329 (337)
Q Consensus 256 ~~~~----~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~~~~~-d 329 (337)
.+.. .+..++|+|+|+ ++++++.||.++||.++.. +. ...+..+...+..+ .|+|+++.++..+. +
T Consensus 330 ~~~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~~~~------~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~ 401 (741)
T 2ecf_A 330 ETSPTWVPLHNSLRFLDDGS-ILWSSERTGFQHLYRIDSK------GK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIE 401 (741)
T ss_dssp EECSSCCCCCSCCEECTTSC-EEEEECTTSSCEEEEECSS------SC-EEESCCSSSCEEEEEEEETTTTEEEEEECSS
T ss_pred cCCCCcCCcCCceEECCCCe-EEEEecCCCccEEEEEcCC------CC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCC
Confidence 4433 456899999999 9999999998888887621 12 34555677778887 59999987776554 4
Q ss_pred C--cEEEEeC
Q 038533 330 N--KMQLLKV 337 (337)
Q Consensus 330 ~--~i~iw~l 337 (337)
+ .++||++
T Consensus 402 ~~~~~~l~~~ 411 (741)
T 2ecf_A 402 SARESQIYAV 411 (741)
T ss_dssp CTTCBEEEEE
T ss_pred CCceEEEEEE
Confidence 4 8899974
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=1.5e-24 Score=192.95 Aligned_cols=294 Identities=11% Similarity=0.080 Sum_probs=210.1
Q ss_pred ceeeeeCCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecC----CCCcccC
Q 038533 14 NSVTHESPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDP----NSSSRKS 87 (337)
Q Consensus 14 ~~~~~~~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~----~~~~~~~ 87 (337)
.+.++.....+.+++|+ +++|++++. ++.|.+||+...+..... . ..+...+..++|+| +++
T Consensus 171 ~~~~i~~g~~~~~v~~spdg~~l~v~~~----d~~V~v~D~~~~t~~~~~--~--i~~g~~p~~va~sp~~~~dg~---- 238 (543)
T 1nir_A 171 IVKVIDTGYAVHISRMSASGRYLLVIGR----DARIDMIDLWAKEPTKVA--E--IKIGIEARSVESSKFKGYEDR---- 238 (543)
T ss_dssp EEEEEECSTTEEEEEECTTSCEEEEEET----TSEEEEEETTSSSCEEEE--E--EECCSEEEEEEECCSTTCTTT----
T ss_pred EEEEEecCcccceEEECCCCCEEEEECC----CCeEEEEECcCCCCcEEE--E--EecCCCcceEEeCCCcCCCCC----
Confidence 44555544448999999 899999996 899999998423333322 1 23455689999999 998
Q ss_pred cCCccEEEEeC--C-eEEEEecCCCCccceeeecCCCCC-----cc-cCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCC
Q 038533 88 SSNRHLLASSG--D-FLRLWDVGDSSIEPVAVLNNSKSS-----EF-CAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEK 158 (337)
Q Consensus 88 ~~~~~~l~~~~--~-~v~vw~~~~~~~~~~~~~~~~~~~-----~~-~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 158 (337)
+|++++ + +|.+||..+. +++..+..+... .+ ...+..+.++|..+.++++...++.|.+||..+
T Consensus 239 -----~l~v~~~~~~~v~v~D~~t~--~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~ 311 (543)
T 1nir_A 239 -----YTIAGAYWPPQFAIMDGETL--EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKD 311 (543)
T ss_dssp -----EEEEEEEESSEEEEEETTTC--CEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTT
T ss_pred -----EEEEEEccCCeEEEEecccc--ccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecC
Confidence 777765 4 9999999988 555555542100 00 136889999984556777788899999999987
Q ss_pred ccchh--hhhccCCceeEEEeC-CCcEEEE-EcCCCeEEEEECCCCCCceeeecCC-CCCCCceEEEeecCCCcEEEEEE
Q 038533 159 GVVET--QLIAHDKEVYDICWG-EARVFAS-VSADGSVRIFDLRDKEHSTIIYESP-QPDTPLLRLAWNKQDLRYMATIL 233 (337)
Q Consensus 159 ~~~~~--~~~~~~~~v~~~~~~-~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~~~~ 233 (337)
.+.+. .+ .+...+.+++|+ +++++++ +..+++|.+||+.+++....+.... .|.+....+ ++|..+..++++.
T Consensus 312 ~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~ 389 (543)
T 1nir_A 312 IDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSH 389 (543)
T ss_dssp SSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEB
T ss_pred CCcceeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEecc
Confidence 66443 33 356678899999 7886665 4568999999999987655544221 133333333 4673366666665
Q ss_pred -ecCCEEEEEECCCC------CCCeEEeecccceeeEEEeCCCCCCeEEEEc-------CCCcEEEEeCCCCCCCCCCCC
Q 038533 234 -MDSNKVVILDIRSP------TLPVAELERHRACVNAIAWAPQSRRHICSVG-------DDSQAFIWELPLPPVAGPNGI 299 (337)
Q Consensus 234 -~d~~~i~i~d~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-------~dg~i~iw~~~~~~~~~~~~~ 299 (337)
.++. |.+||+.+. .+.++++..|...+..++++|+++ .|++++ .+++|.+||+. +...
T Consensus 390 ~~d~~-V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~-~l~v~~~~~~~~~~~~~v~v~d~~--~~~~---- 461 (543)
T 1nir_A 390 LGDGS-ISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSS-HLYVDTTFNPDARISQSVAVFDLK--NLDA---- 461 (543)
T ss_dssp SSSSE-EEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCC-EEEECCTTCSSHHHHTCEEEEETT--CTTS----
T ss_pred CCCce-EEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCC-cEEEecCCCCCcccCceEEEEECC--CCCC----
Confidence 4566 999999862 456788888888889999999999 888887 26799999999 4332
Q ss_pred Cc-ee--------eeeCCCceeEEEEccCCCceEEEE-----cCCcEEEEeC
Q 038533 300 DP-MS--------MYSAGSEINQLQWSPAQPDWLAIA-----FSNKMQLLKV 337 (337)
Q Consensus 300 ~~-~~--------~~~~~~~v~~~~~~~~~~~l~~~~-----~d~~i~iw~l 337 (337)
. .. +..+...+..++|+|+|+.++.+. .|+.|.|||.
T Consensus 462 -~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~ 512 (543)
T 1nir_A 462 -KYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDD 512 (543)
T ss_dssp -CCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEET
T ss_pred -CeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEEC
Confidence 2 11 134578899999999999888763 3799999984
No 134
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.94 E-value=8e-24 Score=178.93 Aligned_cols=286 Identities=9% Similarity=0.043 Sum_probs=202.7
Q ss_pred eeeeeCCCceeEEEEe--cceEEEeeeecc---CcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcC
Q 038533 15 SVTHESPYPLYAMAVC--GQRIAVGSFIED---YTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSS 89 (337)
Q Consensus 15 ~~~~~~~~~v~~~~~s--~~~la~g~~~~~---~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~ 89 (337)
+........+..++|+ +++|++++.... .++.|.+|+......... ......+..++|+|+++
T Consensus 34 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~------~~~~~~~~~~~~s~dg~------ 101 (353)
T 3vgz_A 34 MLRKAVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQA------IHNDLKPFGATINNTTQ------ 101 (353)
T ss_dssp EEEEEEESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEE------EEESSCCCSEEEETTTT------
T ss_pred hhhhhhccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEE------EecCCCcceEEECCCCC------
Confidence 4445556678899999 778888774110 156888877654432222 23345578999999998
Q ss_pred CccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCc----ccCCeeEEEeecCCCCeEEEee--CCCcEEEEeCCCccc
Q 038533 90 NRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSE----FCAPLTSFDWNEIEPKRIGTCS--IDTTCTIWDIEKGVV 161 (337)
Q Consensus 90 ~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~l~~~~--~dg~i~v~d~~~~~~ 161 (337)
.+++++. + .|.+||..++ +....+..+.... ....+.+++|+| +++.+++++ .++.|.+||+.+++.
T Consensus 102 --~l~v~~~~~~~v~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~i~~~d~~~~~~ 176 (353)
T 3vgz_A 102 --TLWFGNTVNSAVTAIDAKTG--EVKGRLVLDDRKRTEEVRPLQPRELVADD-ATNTVYISGIGKESVIWVVDGGNIKL 176 (353)
T ss_dssp --EEEEEETTTTEEEEEETTTC--CEEEEEESCCCCCCSSCCCCEEEEEEEET-TTTEEEEEEESSSCEEEEEETTTTEE
T ss_pred --EEEEEecCCCEEEEEeCCCC--eeEEEEecCCCccccccCCCCCceEEECC-CCCEEEEEecCCCceEEEEcCCCCce
Confidence 3555555 4 9999999988 4445554432100 001268899999 888777665 478999999999988
Q ss_pred hhhhhccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCC-CCCCCceEEEeecCCCcEEEEEEecCCEE
Q 038533 162 ETQLIAHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESP-QPDTPLLRLAWNKQDLRYMATILMDSNKV 239 (337)
Q Consensus 162 ~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~~~~~d~~~i 239 (337)
+..+..+...+..++|+ +++.+++++.++.|.+||+.+++....+.... .+...+..++|+| +++++++++.+...|
T Consensus 177 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~v 255 (353)
T 3vgz_A 177 KTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDT-ARQRAFITDSKAAEV 255 (353)
T ss_dssp EEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEET-TTTEEEEEESSSSEE
T ss_pred EEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECC-CCCEEEEEeCCCCEE
Confidence 77776556668899999 78899999999999999999887655544321 2345678899999 888887777664459
Q ss_pred EEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccC
Q 038533 240 VILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPA 319 (337)
Q Consensus 240 ~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 319 (337)
.+||+.+ .+.+..+.... ...++|+|+++.++++...++.|.+||....+ ..........+.+++|+|+
T Consensus 256 ~~~d~~~-~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~--------~~~~~~~~~~~~~~~~s~d 324 (353)
T 3vgz_A 256 LVVDTRN-GNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYK--------VVKTFDTPTHPNSLALSAD 324 (353)
T ss_dssp EEEETTT-CCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTE--------EEEEEECCSEEEEEEECTT
T ss_pred EEEECCC-CcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCe--------EEEEEecCCCCCeEEEcCC
Confidence 9999987 55566665433 36799999998445555579999999998222 3333344567899999999
Q ss_pred CCceEEEEcC
Q 038533 320 QPDWLAIAFS 329 (337)
Q Consensus 320 ~~~l~~~~~d 329 (337)
++.++.+..+
T Consensus 325 g~~l~v~~~~ 334 (353)
T 3vgz_A 325 GKTLYVSVKQ 334 (353)
T ss_dssp SCEEEEEEEC
T ss_pred CCEEEEEEcc
Confidence 9877766544
No 135
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.94 E-value=5.4e-24 Score=178.50 Aligned_cols=272 Identities=10% Similarity=0.057 Sum_probs=184.3
Q ss_pred cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCC
Q 038533 31 GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGD 108 (337)
Q Consensus 31 ~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~ 108 (337)
+..+++++. ++.|.+|+.......... ..+...+ .++|+|+++ .+++++. + .|.+||+.+
T Consensus 10 ~~~~v~~~~----~~~v~~~d~~~~~~~~~~-----~~~~~~~-~~~~s~dg~--------~l~~~~~~~~~i~~~d~~~ 71 (331)
T 3u4y_A 10 NFGIVVEQH----LRRISFFSTDTLEILNQI-----TLGYDFV-DTAITSDCS--------NVVVTSDFCQTLVQIETQL 71 (331)
T ss_dssp CEEEEEEGG----GTEEEEEETTTCCEEEEE-----ECCCCEE-EEEECSSSC--------EEEEEESTTCEEEEEECSS
T ss_pred CEEEEEecC----CCeEEEEeCcccceeeeE-----EccCCcc-eEEEcCCCC--------EEEEEeCCCCeEEEEECCC
Confidence 344566664 899999987765443332 2234445 999999998 3444554 4 999999998
Q ss_pred CCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCC---cEEEEeCCCccchhhhhccCCceeEEEeC-CCcEEE
Q 038533 109 SSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDT---TCTIWDIEKGVVETQLIAHDKEVYDICWG-EARVFA 184 (337)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg---~i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~ 184 (337)
++. ....+..+. .+..+++|+| ++++++++..++ .|.+||+.+++.+..+.. .....+++|+ ++++++
T Consensus 72 ~~~-~~~~~~~~~-----~~~~~~~~s~-dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~ 143 (331)
T 3u4y_A 72 EPP-KVVAIQEGQ-----SSMADVDITP-DDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLI 143 (331)
T ss_dssp SSC-EEEEEEECS-----SCCCCEEECT-TSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEE
T ss_pred Cce-eEEecccCC-----CCccceEECC-CCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEE
Confidence 842 155555554 5555599999 999888666553 899999999887776654 3456899999 676454
Q ss_pred -EEcCCCe-EEEEECCCCCCceee-ecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCC---eEEeeccc
Q 038533 185 -SVSADGS-VRIFDLRDKEHSTII-YESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLP---VAELERHR 258 (337)
Q Consensus 185 -~~~~dg~-i~iwd~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~---~~~~~~~~ 258 (337)
+...++. |.+|++......... ............++|+| +++++++++.....|++||+.+ .+. +..+.. .
T Consensus 144 ~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~d~~~-~~~~~~~~~~~~-~ 220 (331)
T 3u4y_A 144 LIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTP-DGNFAFVANLIGNSIGILETQN-PENITLLNAVGT-N 220 (331)
T ss_dssp EEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECT-TSSEEEEEETTTTEEEEEECSS-TTSCEEEEEEEC-S
T ss_pred EEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECC-CCCEEEEEeCCCCeEEEEECCC-CcccceeeeccC-C
Confidence 4456678 999999865432111 11001235578999999 8887777665444499999987 555 556654 3
Q ss_pred ceeeEEEeCCCCCCeEEEE-cCCCcEEEEeCCCCCCCCCCCCCceeeee----CCC---ceeEEEEccCCCceEEEEc-C
Q 038533 259 ACVNAIAWAPQSRRHICSV-GDDSQAFIWELPLPPVAGPNGIDPMSMYS----AGS---EINQLQWSPAQPDWLAIAF-S 329 (337)
Q Consensus 259 ~~v~~~~~~~~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~~~~~~----~~~---~v~~~~~~~~~~~l~~~~~-d 329 (337)
..+..++|+|+|+ +|+++ ..++.|.+||+..++... ...... +.. ....++|+|+++.|++++. +
T Consensus 221 ~~~~~~~~spdg~-~l~v~~~~~~~i~~~d~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~ 294 (331)
T 3u4y_A 221 NLPGTIVVSRDGS-TVYVLTESTVDVFNFNQLSGTLSF-----VKSFGHGLLIDPRPLFGANQMALNKTETKLFISANIS 294 (331)
T ss_dssp SCCCCEEECTTSS-EEEEECSSEEEEEEEETTTTEEEE-----EEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTT
T ss_pred CCCceEEECCCCC-EEEEEEcCCCEEEEEECCCCceee-----ecccccccccCCCCcccccceEECCCCCEEEEecCCC
Confidence 6678999999999 55544 467889999998332100 001111 111 2356899999998877664 6
Q ss_pred CcEEEEeC
Q 038533 330 NKMQLLKV 337 (337)
Q Consensus 330 ~~i~iw~l 337 (337)
+.|.+|++
T Consensus 295 ~~v~v~d~ 302 (331)
T 3u4y_A 295 RELKVFTI 302 (331)
T ss_dssp TEEEEEET
T ss_pred CcEEEEEe
Confidence 79999986
No 136
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.94 E-value=5e-24 Score=196.65 Aligned_cols=283 Identities=12% Similarity=0.159 Sum_probs=198.9
Q ss_pred CceeEEEEe-cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeCC-
Q 038533 22 YPLYAMAVC-GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSGD- 99 (337)
Q Consensus 22 ~~v~~~~~s-~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~~- 99 (337)
..|.+++|+ .+.++++. ++.|.+|++........ ..+...+.+++|+|+++ .|+.+.+
T Consensus 82 ~~v~~~~~spd~~~~~~~-----~~~i~~~d~~~~~~~~l------~~~~~~~~~~~~SpdG~---------~la~~~~~ 141 (706)
T 2z3z_A 82 FPSFRTLDAGRGLVVLFT-----QGGLVGFDMLARKVTYL------FDTNEETASLDFSPVGD---------RVAYVRNH 141 (706)
T ss_dssp CCCEEEEETTTTEEEEEE-----TTEEEEEETTTTEEEEE------ECCTTCCTTCEECTTSS---------EEEEEETT
T ss_pred cCceeEEECCCCeEEEEE-----CCEEEEEECCCCceEEc------cCCcccccCCcCCCCCC---------EEEEEECC
Confidence 569999999 76777766 89999999865432211 45667799999999999 8888777
Q ss_pred eEEEEecCC-----CCccceeeecCCCCC---------cccCCeeEEEeecCCCCeEEEee-------------------
Q 038533 100 FLRLWDVGD-----SSIEPVAVLNNSKSS---------EFCAPLTSFDWNEIEPKRIGTCS------------------- 146 (337)
Q Consensus 100 ~v~vw~~~~-----~~~~~~~~~~~~~~~---------~~~~~i~~~~~~~~~~~~l~~~~------------------- 146 (337)
.|++|++.+ ++ .......+... +....+.+++|+| ++++|++++
T Consensus 142 ~i~v~~~~~~~~~~g~--~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~~~~ 218 (706)
T 2z3z_A 142 NLYIARGGKLGEGMSR--AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHPLEA 218 (706)
T ss_dssp EEEEEECBCTTSCCCC--CEESCSCCBTTEEESSCCGGGCTTCCCSEEECT-TSSEEEEEEEECTTSCCEEEEECCSSSC
T ss_pred eEEEEecCcccccCCC--cEEeccCCCCCeEcccchhhhhcCCCceEEECC-CCCEEEEEEECCCCCceEEeeccCCCCC
Confidence 999999998 73 33333332200 0001258999999 999999987
Q ss_pred --------------CCCcEEEEeCCCccchhhh--hccCCceeEEEeC-CCcEEEEEcCCC-----eEEEEECCCCCCce
Q 038533 147 --------------IDTTCTIWDIEKGVVETQL--IAHDKEVYDICWG-EARVFASVSADG-----SVRIFDLRDKEHST 204 (337)
Q Consensus 147 --------------~dg~i~v~d~~~~~~~~~~--~~~~~~v~~~~~~-~~~~l~~~~~dg-----~i~iwd~~~~~~~~ 204 (337)
.+..|++||+.+++..... ..|...+.+++|+ +++.|++++.++ .|.+||+.+++...
T Consensus 219 ~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~ 298 (706)
T 2z3z_A 219 ESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVR 298 (706)
T ss_dssp EEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEE
T ss_pred ceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceee
Confidence 4467999999888754333 2466789999999 788888877765 89999999884333
Q ss_pred eeecC--CCCCCCceEEEeec-CCCcEEEEEEecCCEEEEEECCCCCCCeEEeecccceeeE-EEeCCCCCCeEEEEcCC
Q 038533 205 IIYES--PQPDTPLLRLAWNK-QDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNA-IAWAPQSRRHICSVGDD 280 (337)
Q Consensus 205 ~~~~~--~~~~~~i~~~~~~~-~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~l~~~~~d 280 (337)
.+... ......+..+.|+| .++++++++..++. +++|++...+..+..+..+...+.. ++|+|+++.++++++.+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~-~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~ 377 (706)
T 2z3z_A 299 TLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGW-NHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEA 377 (706)
T ss_dssp EEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSS-CEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSS
T ss_pred EEEEccCCCeECccCCceeecCCCCEEEEEEccCCc-cEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCC
Confidence 33321 11112346789997 25678888888887 8888876435556777777777876 79999998444555555
Q ss_pred C----cEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEcC----CcEEEEeC
Q 038533 281 S----QAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFS----NKMQLLKV 337 (337)
Q Consensus 281 g----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~iw~l 337 (337)
+ .|..||+. +. ... ...+...+.+++|+|+++.++.++.+ +.+.+|++
T Consensus 378 ~~~~~~l~~~d~~--~~------~~~-~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~ 433 (706)
T 2z3z_A 378 SPLERHFYCIDIK--GG------KTK-DLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNI 433 (706)
T ss_dssp CTTCBEEEEEETT--CC------CCE-ESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEES
T ss_pred CCceEEEEEEEcC--CC------Cce-eccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEEC
Confidence 5 55556655 21 122 22366779999999999988776543 56999974
No 137
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.94 E-value=6.4e-24 Score=188.94 Aligned_cols=278 Identities=14% Similarity=0.104 Sum_probs=197.8
Q ss_pred EEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEE
Q 038533 28 AVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRL 103 (337)
Q Consensus 28 ~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~v 103 (337)
+|+ +.++++++. ++.|.+||......... +..++. +..++|+|+++ +|++++ + .|++
T Consensus 144 ~~~p~~~~~vs~~~----d~~V~v~D~~t~~~~~~----i~~g~~--~~~v~~spdg~---------~l~v~~~d~~V~v 204 (543)
T 1nir_A 144 DLDLPNLFSVTLRD----AGQIALVDGDSKKIVKV----IDTGYA--VHISRMSASGR---------YLLVIGRDARIDM 204 (543)
T ss_dssp CCCGGGEEEEEEGG----GTEEEEEETTTCCEEEE----EECSTT--EEEEEECTTSC---------EEEEEETTSEEEE
T ss_pred ccCCCCEEEEEEcC----CCeEEEEECCCceEEEE----EecCcc--cceEEECCCCC---------EEEEECCCCeEEE
Confidence 366 666777665 99999998765433222 222333 88999999999 777666 5 9999
Q ss_pred Eec--CCCCccceeeecCCCCCcccCCeeEEEeecC---CCCeEEEee-CCCcEEEEeCCCccchhhhhc----------
Q 038533 104 WDV--GDSSIEPVAVLNNSKSSEFCAPLTSFDWNEI---EPKRIGTCS-IDTTCTIWDIEKGVVETQLIA---------- 167 (337)
Q Consensus 104 w~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~---------- 167 (337)
||+ .++ +.+..+..+ ..+..++|+|. +++++++++ .++.|.+||..+++++..+..
T Consensus 205 ~D~~~~t~--~~~~~i~~g------~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~ 276 (543)
T 1nir_A 205 IDLWAKEP--TKVAEIKIG------IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTY 276 (543)
T ss_dssp EETTSSSC--EEEEEEECC------SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCE
T ss_pred EECcCCCC--cEEEEEecC------CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCcccc
Confidence 999 666 566666643 56789999962 677887777 489999999999988776653
Q ss_pred cC-CceeEEEeC-C-CcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEEC
Q 038533 168 HD-KEVYDICWG-E-ARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDI 244 (337)
Q Consensus 168 ~~-~~v~~~~~~-~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~ 244 (337)
|. ..+.++.++ + ..++++...++.|.+||+.+.+........ +...+..+.|+| ++++|++++.....|.+||+
T Consensus 277 ~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~--~~~~~~~~~~sp-dg~~l~va~~~~~~v~v~D~ 353 (543)
T 1nir_A 277 HPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG--AAPFLHDGGWDS-SHRYFMTAANNSNKVAVIDS 353 (543)
T ss_dssp ESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE--CCSSCCCEEECT-TSCEEEEEEGGGTEEEEEET
T ss_pred ccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec--cCcCccCceECC-CCCEEEEEecCCCeEEEEEC
Confidence 22 268899999 3 456778888999999999887654421111 345678899999 99988777654334999999
Q ss_pred CCCCCCeEEeec----ccceeeEEEeCCCCCCeEEEEc-CCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccC
Q 038533 245 RSPTLPVAELER----HRACVNAIAWAPQSRRHICSVG-DDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPA 319 (337)
Q Consensus 245 ~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 319 (337)
.+ ++++..+.. |.+....+ ++|++..+++++. .|++|.+||+....-..........+..|...+..++++|+
T Consensus 354 ~t-g~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pd 431 (543)
T 1nir_A 354 KD-RRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPK 431 (543)
T ss_dssp TT-TEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTT
T ss_pred CC-CeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCC
Confidence 98 556666653 44333333 4677443778876 68999999998311111001223466678888899999999
Q ss_pred CCceEEEE-------cCCcEEEEeC
Q 038533 320 QPDWLAIA-------FSNKMQLLKV 337 (337)
Q Consensus 320 ~~~l~~~~-------~d~~i~iw~l 337 (337)
++.|++.+ .+++|.||++
T Consensus 432 g~~l~v~~~~~~~~~~~~~v~v~d~ 456 (543)
T 1nir_A 432 SSHLYVDTTFNPDARISQSVAVFDL 456 (543)
T ss_dssp CCEEEECCTTCSSHHHHTCEEEEET
T ss_pred CCcEEEecCCCCCcccCceEEEEEC
Confidence 99888876 2789999985
No 138
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.93 E-value=9.7e-25 Score=201.96 Aligned_cols=285 Identities=9% Similarity=0.069 Sum_probs=190.0
Q ss_pred CCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCC---CCeEEEecCCCCcccCcCCccEEE
Q 038533 21 PYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPY---PPTKLMFDPNSSSRKSSSNRHLLA 95 (337)
Q Consensus 21 ~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~---~i~~i~~~~~~~~~~~~~~~~~l~ 95 (337)
...+.+++|+ |+++++ +. ||.|++|+.......... ..|.. .|.+++|+||++ +|+
T Consensus 16 ~~~~~~~~~spdg~~~~~-~~----dg~i~~~d~~~g~~~~~~-----~~~~~~~~~v~~~~~SpDg~---------~l~ 76 (723)
T 1xfd_A 16 KIHDPEAKWISDTEFIYR-EQ----KGTVRLWNVETNTSTVLI-----EGKKIESLRAIRYEISPDRE---------YAL 76 (723)
T ss_dssp CCCCCCCCBSSSSCBCCC-CS----SSCEEEBCGGGCCCEEEE-----CTTTTTTTTCSEEEECTTSS---------EEE
T ss_pred cccccccEEcCCCcEEEE-eC----CCCEEEEECCCCcEEEEe-----ccccccccccceEEECCCCC---------EEE
Confidence 3457889999 776665 44 899999988766544332 33433 499999999999 777
Q ss_pred EeC----------C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhh
Q 038533 96 SSG----------D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQ 164 (337)
Q Consensus 96 ~~~----------~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~ 164 (337)
+++ + .+.+||+.+++...+.....|. ..+..++||| +++.|+.++. +.|++||+.+++....
T Consensus 77 ~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~-----~~~~~~~~SP-dG~~la~~~~-~~i~~~~~~~g~~~~~ 149 (723)
T 1xfd_A 77 FSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSN-----AKLQYAGWGP-KGQQLIFIFE-NNIYYCAHVGKQAIRV 149 (723)
T ss_dssp EEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCS-----CCCSBCCBCS-STTCEEEEET-TEEEEESSSSSCCEEE
T ss_pred EEecCccceeecceeeEEEEECCCCceEeccCCcccc-----ccccccEECC-CCCEEEEEEC-CeEEEEECCCCceEEE
Confidence 764 2 6779999988532233333333 5588999999 9999999886 7999999998876554
Q ss_pred hhccCCc------------------eeEEEeC-CCcEEEEEcCCC----------------------------------e
Q 038533 165 LIAHDKE------------------VYDICWG-EARVFASVSADG----------------------------------S 191 (337)
Q Consensus 165 ~~~~~~~------------------v~~~~~~-~~~~l~~~~~dg----------------------------------~ 191 (337)
...+... +.+++|+ +++.|++++.++ .
T Consensus 150 ~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 229 (723)
T 1xfd_A 150 VSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSIS 229 (723)
T ss_dssp ECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEE
T ss_pred ecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeE
Confidence 4433332 3789999 788999887543 7
Q ss_pred EEEEECCCCCCceeeecCC---CCCCCceEEEeecCCCcEEEEEEecC---CEEEEEECCCCCCCeEEeec-cccee---
Q 038533 192 VRIFDLRDKEHSTIIYESP---QPDTPLLRLAWNKQDLRYMATILMDS---NKVVILDIRSPTLPVAELER-HRACV--- 261 (337)
Q Consensus 192 i~iwd~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~l~~~~~d~---~~i~i~d~~~~~~~~~~~~~-~~~~v--- 261 (337)
|++||+.+++....+.... .+...+..++|+| +++++++....+ ..|++||+.+ ++....+.. +...+
T Consensus 230 l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~-g~~~~~~~~~~~~~~~~~ 307 (723)
T 1xfd_A 230 LHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWAT-STKVAVTWLNRAQNVSILTLCDATT-GVCTKKHEDESEAWLHRQ 307 (723)
T ss_dssp EEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESS-SSEEEEEEEETTSCEEEEEEEETTT-CCEEEEEEEECSSCCCCC
T ss_pred EEEEECCCCceeEEeeCCccCCCccceeEEEEEeC-CCeEEEEEEcCCCCeEEEEEEeCCC-CcceEEEEeccCCEEecc
Confidence 9999998877433332110 1245688999999 999887765432 2499999987 444444433 33333
Q ss_pred -eEEEeCCCCCCeEEE-EcCCC------cEEEEeCCCCCCCCCCCCCceeeeeCCCceeE-EEEccCCCceEEEEcC---
Q 038533 262 -NAIAWAPQSRRHICS-VGDDS------QAFIWELPLPPVAGPNGIDPMSMYSAGSEINQ-LQWSPAQPDWLAIAFS--- 329 (337)
Q Consensus 262 -~~~~~~~~~~~~l~~-~~~dg------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~d--- 329 (337)
..++|+|+|+.+++. +..++ .|.+||+.. ... + .....+..+...+.. ++|+|+++.|+..+.+
T Consensus 308 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~-~~~-~--~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 383 (723)
T 1xfd_A 308 NEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQP-NSS-N--DNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLP 383 (723)
T ss_dssp CCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSC-CSS-S--CCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCT
T ss_pred CCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccC-CCC-c--cceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCC
Confidence 378999999944443 55677 466666321 110 0 001222223334444 6999999988877655
Q ss_pred CcEEEEeC
Q 038533 330 NKMQLLKV 337 (337)
Q Consensus 330 ~~i~iw~l 337 (337)
+.++||++
T Consensus 384 ~~~~l~~~ 391 (723)
T 1xfd_A 384 RRRQLYSA 391 (723)
T ss_dssp TCCEEEEE
T ss_pred cceEEEEE
Confidence 78999974
No 139
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.93 E-value=3.6e-24 Score=179.79 Aligned_cols=268 Identities=10% Similarity=0.068 Sum_probs=186.3
Q ss_pred ceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCC-CCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCC
Q 038533 32 QRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPY-PPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGD 108 (337)
Q Consensus 32 ~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~-~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~ 108 (337)
++|++++. ++.|.+||.......... ..++.. .+..++|+|+++ .+++++. + .|.+||+.+
T Consensus 2 ~~~v~~~~----~~~v~~~d~~~~~~~~~~----~~~~~~~~~~~~~~s~dg~--------~l~v~~~~~~~v~~~d~~~ 65 (337)
T 1pby_B 2 DYILAPAR----PDKLVVIDTEKMAVDKVI----TIADAGPTPMVPMVAPGGR--------IAYATVNKSESLVKIDLVT 65 (337)
T ss_dssp EEEEEEET----TTEEEEEETTTTEEEEEE----ECTTCTTCCCCEEECTTSS--------EEEEEETTTTEEEEEETTT
T ss_pred cEEEEcCC----CCeEEEEECCCCcEEEEE----EcCCCCCCccceEEcCCCC--------EEEEEeCCCCeEEEEECCC
Confidence 57888886 999999987654322221 123322 488999999997 3556665 3 999999998
Q ss_pred CCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEee------------CCCcEEEEeCCCccchhhhhccCCceeEEE
Q 038533 109 SSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCS------------IDTTCTIWDIEKGVVETQLIAHDKEVYDIC 176 (337)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~------------~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~ 176 (337)
++ ....+.......+...+.+++|+| +++.++++. .++.|.+||+.+++.+..+.. ...+.+++
T Consensus 66 ~~--~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~ 141 (337)
T 1pby_B 66 GE--TLGRIDLSTPEERVKSLFGAALSP-DGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLA 141 (337)
T ss_dssp CC--EEEEEECCBTTEEEECTTCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEE
T ss_pred CC--eEeeEEcCCcccccccccceEECC-CCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeE
Confidence 84 444443211000112577899999 898888886 579999999998887666653 45678899
Q ss_pred eC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCC------------------
Q 038533 177 WG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSN------------------ 237 (337)
Q Consensus 177 ~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~------------------ 237 (337)
|+ ++++++++ ++.|.+||+.+++....+... .... .+.|+| ++..++..+..+.
T Consensus 142 ~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~-~~~~---~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (337)
T 1pby_B 142 WARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQ-SWEA---ETYAQP-DVLAVWNQHESSGVMATPFYTARKDIDPADP 214 (337)
T ss_dssp ECTTSSCEEEE--SSSEEEEETTTTEEEEEECST-TTTT---TTBCCC-BCCCCCCCCTTTTEEEEEEEEEBTTSCTTSG
T ss_pred ECCCCCEEEEe--CCeEEEEECCCCcEeeeeecc-ccCC---CceeCC-CccEEeeeccCCCceeeeeeccccccccccc
Confidence 99 78878777 689999999988754433222 1112 236788 7776655443332
Q ss_pred -----EEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCcee
Q 038533 238 -----KVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEIN 312 (337)
Q Consensus 238 -----~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~ 312 (337)
.|.+||+.+.......+..+...+..++|+|+++ +++++ ++.|.+||+...+ ..........+.
T Consensus 215 ~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~--~~~v~~~d~~~~~--------~~~~~~~~~~~~ 283 (337)
T 1pby_B 215 TAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKT-RAFGA--YNVLESFDLEKNA--------SIKRVPLPHSYY 283 (337)
T ss_dssp GGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSS-EEEEE--ESEEEEEETTTTE--------EEEEEECSSCCC
T ss_pred cccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCC-EEEEe--CCeEEEEECCCCc--------CcceecCCCcee
Confidence 2689999874322233445556788999999999 77777 7999999998221 233333445689
Q ss_pred EEEEccCCCceEEEEcCCcEEEEeC
Q 038533 313 QLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 313 ~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
+++|+|+++.+++++.++.|++|++
T Consensus 284 ~~~~s~dg~~l~~~~~~~~i~v~d~ 308 (337)
T 1pby_B 284 SVNVSTDGSTVWLGGALGDLAAYDA 308 (337)
T ss_dssp EEEECTTSCEEEEESBSSEEEEEET
T ss_pred eEEECCCCCEEEEEcCCCcEEEEEC
Confidence 9999999998888888999999985
No 140
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.93 E-value=5.9e-24 Score=203.88 Aligned_cols=278 Identities=7% Similarity=0.050 Sum_probs=211.0
Q ss_pred eCCCceeEEEEe-cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEe
Q 038533 19 ESPYPLYAMAVC-GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASS 97 (337)
Q Consensus 19 ~~~~~v~~~~~s-~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~ 97 (337)
.+...+.++.|+ ..+++++.. ++.+.||.++........ ...|. .+...+|+|+++ .|+.+
T Consensus 201 ~~~~~v~~~~~s~d~l~~~~~~----dg~~~l~~~~~~g~~~~~----l~~~~-~~~~~~~SpDG~---------~la~~ 262 (1045)
T 1k32_A 201 DMSTHVSSPVIVGHRIYFITDI----DGFGQIYSTDLDGKDLRK----HTSFT-DYYPRHLNTDGR---------RILFS 262 (1045)
T ss_dssp CCSSCCEEEEEETTEEEEEECT----TSSCEEEEEETTSCSCEE----CCCCC-SSCEEEEEESSS---------CEEEE
T ss_pred CCCCcccceEEeCCEEEEEEec----cCceEEEEEeCCCCcceE----ecCCC-CcceeeEcCCCC---------EEEEE
Confidence 457889999999 544445553 789999998865544433 13343 477889999998 77777
Q ss_pred CC-eEEEEecCCCCccceeeecCCCCC------cccCCeeEEEee-cCCCCeEEEeeCCCcEEEEeCCCccchhhhhccC
Q 038533 98 GD-FLRLWDVGDSSIEPVAVLNNSKSS------EFCAPLTSFDWN-EIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHD 169 (337)
Q Consensus 98 ~~-~v~vw~~~~~~~~~~~~~~~~~~~------~~~~~i~~~~~~-~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~ 169 (337)
.+ .|.+|++... .+..+..+... .+...+.+++|+ | +++.+++++ ++.|.+|++.+++.. .+..|.
T Consensus 263 ~~~~i~~~d~~~~---~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~p-dG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~ 336 (1045)
T 1k32_A 263 KGGSIYIFNPDTE---KIEKIEIGDLESPEDRIISIPSKFAEDFSPL-DGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPL 336 (1045)
T ss_dssp ETTEEEEECTTTC---CEEECCCCCCCBCCSEEEECGGGGEEEEEEC-GGGCEEEEE-TTEEEEECTTSSBEE-ECSCCS
T ss_pred eCCEEEEecCCce---EeeeeccCcccccccccccccccceeeecCC-CCCEEEEEE-cCEEEEEcCCCCceE-EccCCC
Confidence 77 9999999544 22344432100 011468999999 9 999999887 789999999877644 355666
Q ss_pred C-ceeEEEeCCCcEEEEEcCCCeEE-EEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCC
Q 038533 170 K-EVYDICWGEARVFASVSADGSVR-IFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSP 247 (337)
Q Consensus 170 ~-~v~~~~~~~~~~l~~~~~dg~i~-iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~ 247 (337)
. .+..++|++++.+++++.++.+. +||+..++.... . .+...+..++|+| ++++|++++.++. |++||+.+
T Consensus 337 ~~~~~~~~~sdg~~l~~~s~~~~l~~~~d~~~~~~~~l-~---~~~~~~~~~~~Sp-DG~~la~~~~~~~-v~~~d~~t- 409 (1045)
T 1k32_A 337 RIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKF-E---ENLGNVFAMGVDR-NGKFAVVANDRFE-IMTVDLET- 409 (1045)
T ss_dssp CEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEEC-C---CCCCSEEEEEECT-TSSEEEEEETTSE-EEEEETTT-
T ss_pred cceEEeeeEcCCCeEEEEECCCceEEEEECCCCCceEe-c---CCccceeeeEECC-CCCEEEEECCCCe-EEEEECCC-
Confidence 6 88999999667888888888898 999987653222 2 3567899999999 9999999998887 99999987
Q ss_pred CCCeEEeecccceeeEEEeCCCCCCeEEEEcCCC----------cEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEc
Q 038533 248 TLPVAELERHRACVNAIAWAPQSRRHICSVGDDS----------QAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWS 317 (337)
Q Consensus 248 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg----------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 317 (337)
++.......|...+..++|+|+|+ +|++++.++ .|++||+. + + ....+..|...+..++|+
T Consensus 410 g~~~~~~~~~~~~v~~~~~SpDG~-~la~~~~~~~~~~~~~~~~~i~l~d~~--~-----g-~~~~l~~~~~~~~~~~~s 480 (1045)
T 1k32_A 410 GKPTVIERSREAMITDFTISDNSR-FIAYGFPLKHGETDGYVMQAIHVYDME--G-----R-KIFAATTENSHDYAPAFD 480 (1045)
T ss_dssp CCEEEEEECSSSCCCCEEECTTSC-EEEEEEEECSSTTCSCCEEEEEEEETT--T-----T-EEEECSCSSSBEEEEEEC
T ss_pred CceEEeccCCCCCccceEECCCCC-eEEEEecCccccccCCCCCeEEEEECC--C-----C-cEEEeeCCCcccCCceEc
Confidence 555556667888999999999999 787776543 89999998 3 1 144566778889999999
Q ss_pred cCCCceEEEEcCCcEEEEe
Q 038533 318 PAQPDWLAIAFSNKMQLLK 336 (337)
Q Consensus 318 ~~~~~l~~~~~d~~i~iw~ 336 (337)
|+|+.|+.++.++...+|+
T Consensus 481 pdG~~l~~~s~~~~~~~~~ 499 (1045)
T 1k32_A 481 ADSKNLYYLSYRSLDPSPD 499 (1045)
T ss_dssp TTSCEEEEEESCCCCCEEC
T ss_pred CCCCEEEEEecccCCcCcc
Confidence 9999999888877777765
No 141
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.93 E-value=2e-23 Score=193.69 Aligned_cols=282 Identities=11% Similarity=0.111 Sum_probs=198.5
Q ss_pred ceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCc-ceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeCC
Q 038533 23 PLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESL-SIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSGD 99 (337)
Q Consensus 23 ~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~-~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~~ 99 (337)
.|.+++|| |++|++++ ++.|.+|+++.... .... ...|...+..++|+||++ .|+.+++
T Consensus 110 ~v~~~~~SpDg~~l~~~~-----~~~i~~~d~~~~~~~~~~~----l~~~~~~~~~~~~SPDG~---------~la~~~~ 171 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPL-----GGELYLYDLKQEGKAAVRQ----LTHGEGFATDAKLSPKGG---------FVSFIRG 171 (741)
T ss_dssp ESCCCEECTTSSEEEEEE-----TTEEEEEESSSCSTTSCCB----CCCSSSCEEEEEECTTSS---------EEEEEET
T ss_pred CcceeEECCCCCEEEEEe-----CCcEEEEECCCCCcceEEE----cccCCcccccccCCCCCC---------EEEEEeC
Confidence 48899999 89999998 69999999876520 1111 256778899999999999 8888887
Q ss_pred -eEEEEecCCCCccceeeecCCCCCcc-----------cCCeeEEEeecCCCCeEEEeeCCC------------------
Q 038533 100 -FLRLWDVGDSSIEPVAVLNNSKSSEF-----------CAPLTSFDWNEIEPKRIGTCSIDT------------------ 149 (337)
Q Consensus 100 -~v~vw~~~~~~~~~~~~~~~~~~~~~-----------~~~i~~~~~~~~~~~~l~~~~~dg------------------ 149 (337)
.|.+||+.+++ .......+..... ...+..++|+| +++.|++++.|+
T Consensus 172 ~~i~~~d~~~g~--~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~Sp-Dg~~l~~~~~d~~~~~~~~~~~~~p~~~~~ 248 (741)
T 2ecf_A 172 RNLWVIDLASGR--QMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAP-DDSAIAYARIDESPVPVQKRYEVYADRTDV 248 (741)
T ss_dssp TEEEEEETTTTE--EEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECT-TSSCEEEEEEECTTSCEEEEEEECSSCEEE
T ss_pred CcEEEEecCCCC--EEEeccCCccceeccccceeeeeccccccceEECC-CCCEEEEEEEcCCCCceEecCCCCCCcccc
Confidence 99999999873 3333333220000 01257899999 999999988765
Q ss_pred ---------------cEEEEeCCC-ccchhhhh--ccCCceeEEEeCC-CcEEEEEcC-----CCeEEEEECCCCCCcee
Q 038533 150 ---------------TCTIWDIEK-GVVETQLI--AHDKEVYDICWGE-ARVFASVSA-----DGSVRIFDLRDKEHSTI 205 (337)
Q Consensus 150 ---------------~i~v~d~~~-~~~~~~~~--~~~~~v~~~~~~~-~~~l~~~~~-----dg~i~iwd~~~~~~~~~ 205 (337)
.|.+||+.+ ++...... .|...+..++| + ++.|++++. +..|.+||+.+++....
T Consensus 249 ~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~ 327 (741)
T 2ecf_A 249 IEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVL 327 (741)
T ss_dssp EEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEE
T ss_pred eEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEE
Confidence 789999988 76543322 46778999999 6 677776543 57899999998875444
Q ss_pred eecCCC-CCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeecccceeeEE-EeCCCCCCeEEEEcCCC--
Q 038533 206 IYESPQ-PDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAI-AWAPQSRRHICSVGDDS-- 281 (337)
Q Consensus 206 ~~~~~~-~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~l~~~~~dg-- 281 (337)
...... .-..+..++|+| +++++++++.++. ++||.+...+. ...+..|...+..+ .|+|+++.++++++.++
T Consensus 328 ~~~~~~~~~~~~~~~~~sp-dg~~~~~~~~~g~-~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~ 404 (741)
T 2ecf_A 328 AHETSPTWVPLHNSLRFLD-DGSILWSSERTGF-QHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESAR 404 (741)
T ss_dssp EEEECSSCCCCCSCCEECT-TSCEEEEECTTSS-CEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTT
T ss_pred EEcCCCCcCCcCCceEECC-CCeEEEEecCCCc-cEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCc
Confidence 432210 001456899999 8888888888886 77777654344 67777787888887 59999984445666666
Q ss_pred cEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEcC----CcEEEEe
Q 038533 282 QAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFS----NKMQLLK 336 (337)
Q Consensus 282 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~iw~ 336 (337)
.++||++.... .....+.. ...+..++|+|+++.++....+ ..+.+|+
T Consensus 405 ~~~l~~~~~~g------~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~ 456 (741)
T 2ecf_A 405 ESQIYAVPLQG------GQPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFR 456 (741)
T ss_dssp CBEEEEEETTC------CCCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEE
T ss_pred eEEEEEEEcCC------CCeeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEE
Confidence 89999987211 11223333 5668899999999988766433 3566654
No 142
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.92 E-value=1.3e-22 Score=170.63 Aligned_cols=278 Identities=10% Similarity=0.090 Sum_probs=181.3
Q ss_pred ceeeeeCCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCc
Q 038533 14 NSVTHESPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNR 91 (337)
Q Consensus 14 ~~~~~~~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~ 91 (337)
.+..+.+...+.+++|+ +++|++++. .++.|.+|+++...+....... ......+..++|+|+++
T Consensus 30 ~~~~~~~~~~~~~~~~spdg~~l~~~~~---~~~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~s~dg~-------- 96 (343)
T 1ri6_A 30 LTQVVDVPGQVQPMVVSPDKRYLYVGVR---PEFRVLAYRIAPDDGALTFAAE--SALPGSLTHISTDHQGQ-------- 96 (343)
T ss_dssp EEEEEECSSCCCCEEECTTSSEEEEEET---TTTEEEEEEECTTTCCEEEEEE--EECSSCCSEEEECTTSS--------
T ss_pred EeeeEecCCCCceEEECCCCCEEEEeec---CCCeEEEEEecCCCCceeeccc--cccCCCCcEEEEcCCCC--------
Confidence 44556677789999999 888888885 1399999999854433322111 22233789999999998
Q ss_pred cEE-EEeC-C-eEEEEecCCCC-ccceeeecCCCCCcccCCeeEEEeecCCCCeEEEee-CCCcEEEEeCCC-ccchh--
Q 038533 92 HLL-ASSG-D-FLRLWDVGDSS-IEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCS-IDTTCTIWDIEK-GVVET-- 163 (337)
Q Consensus 92 ~~l-~~~~-~-~v~vw~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~dg~i~v~d~~~-~~~~~-- 163 (337)
+| +++. + .|.+||+..+. .+....+..+ ..+.+++|+| +++.+++++ .++.|++||+.+ ++...
T Consensus 97 -~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~------~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 168 (343)
T 1ri6_A 97 -FVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL------DGCHSANISP-DNRTLWVPALKQDRICLFTVSDDGHLVAQD 168 (343)
T ss_dssp -EEEEEETTTTEEEEEEEETTEEEEEEEEECCC------TTBCCCEECT-TSSEEEEEEGGGTEEEEEEECTTSCEEEEE
T ss_pred -EEEEEecCCCeEEEEECCCCccccccccccCC------CCceEEEECC-CCCEEEEecCCCCEEEEEEecCCCceeeec
Confidence 55 4444 4 89999995331 1344444443 4588999999 888777776 899999999987 54321
Q ss_pred --hhh-ccCCceeEEEeC-CCcEEE-EEcCCCeEEEEECCC--CCCc--eeeecCC---CCCCCceEEEeecCCCcEEEE
Q 038533 164 --QLI-AHDKEVYDICWG-EARVFA-SVSADGSVRIFDLRD--KEHS--TIIYESP---QPDTPLLRLAWNKQDLRYMAT 231 (337)
Q Consensus 164 --~~~-~~~~~v~~~~~~-~~~~l~-~~~~dg~i~iwd~~~--~~~~--~~~~~~~---~~~~~i~~~~~~~~~~~~l~~ 231 (337)
.+. .....+..++|+ ++++++ ++..++.|.+||+.. ++.. ......+ .....+..++|+| ++++|++
T Consensus 169 ~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~-dg~~l~v 247 (343)
T 1ri6_A 169 PAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITP-DGRHLYA 247 (343)
T ss_dssp EEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECT-TSSEEEE
T ss_pred ccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECC-CCCEEEE
Confidence 122 123468889999 677565 455899999999964 3321 1111111 1124566899999 8888776
Q ss_pred EE-ecCCEEEEEECCCCC---CCeEEeecccceeeEEEeCCCCCCeEEEEc-CCCcEEEEeCCCCCCCCCCCCCceeeee
Q 038533 232 IL-MDSNKVVILDIRSPT---LPVAELERHRACVNAIAWAPQSRRHICSVG-DDSQAFIWELPLPPVAGPNGIDPMSMYS 306 (337)
Q Consensus 232 ~~-~d~~~i~i~d~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~ 306 (337)
+. .++. |.+||+.... +.+..+..+.. +..++|+|+++ +|++++ .++.|.+|+++..+.. ........
T Consensus 248 ~~~~~~~-i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~-~l~~~~~~~~~v~v~~~d~~~g~----~~~~~~~~ 320 (343)
T 1ri6_A 248 CDRTASL-ITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGK-YLIAAGQKSHHISVYEIVGEQGL----LHEKGRYA 320 (343)
T ss_dssp EETTTTE-EEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSS-EEEEECTTTCEEEEEEEETTTTE----EEEEEEEE
T ss_pred EecCCCE-EEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCC-EEEEecCCCCeEEEEEEcCCCce----eeEccccc
Confidence 65 4555 9999998321 23334444444 88999999999 676666 6899999976621210 01111222
Q ss_pred CCCceeEEEEccCC
Q 038533 307 AGSEINQLQWSPAQ 320 (337)
Q Consensus 307 ~~~~v~~~~~~~~~ 320 (337)
......+++|.|+.
T Consensus 321 ~g~~p~~i~~~~~~ 334 (343)
T 1ri6_A 321 VGQGPMWVVVNAHE 334 (343)
T ss_dssp CSSSCCEEEEEEEC
T ss_pred cCCCCeeEEEEccc
Confidence 23456777887754
No 143
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.92 E-value=3.5e-23 Score=191.01 Aligned_cols=272 Identities=12% Similarity=0.122 Sum_probs=183.9
Q ss_pred ceeEEEEecceEEEeeeeccCcceEEEEEecCCCc--ceecCCC-c----------CCCCCCCCeEEEecCCCCcccCcC
Q 038533 23 PLYAMAVCGQRIAVGSFIEDYTNRVDVVSFEPESL--SIKTHPS-L----------SFDHPYPPTKLMFDPNSSSRKSSS 89 (337)
Q Consensus 23 ~v~~~~~s~~~la~g~~~~~~d~~i~i~~~~~~~~--~~~~~~~-~----------~~~~~~~i~~i~~~~~~~~~~~~~ 89 (337)
.+..+.|.++.+++++. ++ | +||...... ....... + ...+...|.+++|+|+ .
T Consensus 27 ~~~~~~w~g~~~~~~~~----~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~------ 93 (706)
T 2z3z_A 27 YVVGLQWMGDNYVFIEG----DD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-G------ 93 (706)
T ss_dssp -CTTCEEETTEEEEEET----TE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-T------
T ss_pred cCCCCcCcCCeEEEEeC----Cc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-C------
Confidence 46677888666666664 66 8 998876544 2221000 0 0011256999999999 6
Q ss_pred CccEEEEeCCeEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCC-----ccchhh
Q 038533 90 NRHLLASSGDFLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEK-----GVVETQ 164 (337)
Q Consensus 90 ~~~~l~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~-----~~~~~~ 164 (337)
.++++..+.|++||+.+++ .. .+..+. ..+.+++|+| +++.|+++ .++.|++||+.+ ++....
T Consensus 94 --~~~~~~~~~i~~~d~~~~~--~~-~l~~~~-----~~~~~~~~Sp-dG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~ 161 (706)
T 2z3z_A 94 --LVVLFTQGGLVGFDMLARK--VT-YLFDTN-----EETASLDFSP-VGDRVAYV-RNHNLYIARGGKLGEGMSRAIAV 161 (706)
T ss_dssp --EEEEEETTEEEEEETTTTE--EE-EEECCT-----TCCTTCEECT-TSSEEEEE-ETTEEEEEECBCTTSCCCCCEES
T ss_pred --eEEEEECCEEEEEECCCCc--eE-EccCCc-----ccccCCcCCC-CCCEEEEE-ECCeEEEEecCcccccCCCcEEe
Confidence 2555544499999998873 33 333344 6788999999 99999985 679999999988 765544
Q ss_pred hhccCCc--------------eeEEEeC-CCcEEEEEc---------------------------------CCCeEEEEE
Q 038533 165 LIAHDKE--------------VYDICWG-EARVFASVS---------------------------------ADGSVRIFD 196 (337)
Q Consensus 165 ~~~~~~~--------------v~~~~~~-~~~~l~~~~---------------------------------~dg~i~iwd 196 (337)
...+... +.+++|+ ++++|++++ .+..|.+||
T Consensus 162 ~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d 241 (706)
T 2z3z_A 162 TIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYH 241 (706)
T ss_dssp CSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEE
T ss_pred ccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEE
Confidence 3333332 4889999 789999887 457899999
Q ss_pred CCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecC----CEEEEEECCCCCCCeEEee--cccc---eeeEEEeC
Q 038533 197 LRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS----NKVVILDIRSPTLPVAELE--RHRA---CVNAIAWA 267 (337)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~----~~i~i~d~~~~~~~~~~~~--~~~~---~v~~~~~~ 267 (337)
+.+++..... ....+...+.+++|+| +++.|++++.++ ..|++||+.+... ...+. .+.. .+..++|+
T Consensus 242 ~~~~~~~~~~-~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~v~~~d~~~g~~-~~~~~~~~~~~~~~~~~~~~~s 318 (706)
T 2z3z_A 242 LATGKTVYLQ-TGEPKEKFLTNLSWSP-DENILYVAEVNRAQNECKVNAYDAETGRF-VRTLFVETDKHYVEPLHPLTFL 318 (706)
T ss_dssp TTTTEEEECC-CCSCTTCEEEEEEECT-TSSEEEEEEECTTSCEEEEEEEETTTCCE-EEEEEEEECSSCCCCCSCCEEC
T ss_pred CCCCceEeec-cCCCCceeEeeEEEEC-CCCEEEEEEeCCCCCeeEEEEEECCCCce-eeEEEEccCCCeECccCCceee
Confidence 9887643222 2223556789999999 999999888775 1399999987422 33322 1222 24678999
Q ss_pred C--CCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeE-EEEccCCCceEEEEcC
Q 038533 268 P--QSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQ-LQWSPAQPDWLAIAFS 329 (337)
Q Consensus 268 ~--~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~d 329 (337)
| +|+ ++++++.||.+++|.++ .. +.....+..+...+.. ++|+|+++.|+.++.+
T Consensus 319 p~~dg~-~l~~~~~~g~~~l~~~~--~~----~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~ 376 (706)
T 2z3z_A 319 PGSNNQ-FIWQSRRDGWNHLYLYD--TT----GRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTE 376 (706)
T ss_dssp TTCSSE-EEEEECTTSSCEEEEEE--TT----SCEEEECCCSSSCEEEEEEECTTSSEEEEEESS
T ss_pred cCCCCE-EEEEEccCCccEEEEEE--CC----CCEEEecCCCCeEEEeeeEEcCCCCEEEEEecC
Confidence 9 998 99999999999999886 21 1123344556677877 8999999888776654
No 144
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.91 E-value=2e-21 Score=164.96 Aligned_cols=278 Identities=10% Similarity=0.114 Sum_probs=182.3
Q ss_pred cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-----eEEEE
Q 038533 31 GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-----FLRLW 104 (337)
Q Consensus 31 ~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-----~v~vw 104 (337)
..++++|+...+.++.|.+|.++..++.+.... .. +...+..++|+|+++ +|++++ + .|.+|
T Consensus 13 ~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~--~~-~~~~p~~l~~spdg~---------~l~~~~~~~~~~~~v~~~ 80 (361)
T 3scy_A 13 ELTMLVGTYTSGNSKGIYTFRFNEETGESLPLS--DA-EVANPSYLIPSADGK---------FVYSVNEFSKDQAAVSAF 80 (361)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEETTTCCEEEEE--EE-ECSCCCSEEECTTSS---------EEEEEECCSSTTCEEEEE
T ss_pred ceEEEEEeccCCCCCCEEEEEEeCCCCCEEEee--cc-cCCCCceEEECCCCC---------EEEEEEccCCCCCcEEEE
Confidence 456677776445578999999988766554411 12 677788999999998 655543 1 89999
Q ss_pred ecCC--CCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEee-CCCcEEEEeCCCccchhhhh--------------c
Q 038533 105 DVGD--SSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCS-IDTTCTIWDIEKGVVETQLI--------------A 167 (337)
Q Consensus 105 ~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~--------------~ 167 (337)
++.. ++.+.+.....+. .....+++ +++++++++ .++.|.+|++.....+..+. .
T Consensus 81 ~~~~~~g~~~~~~~~~~~~-----~~p~~~~~---dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 152 (361)
T 3scy_A 81 AFDKEKGTLHLLNTQKTMG-----ADPCYLTT---NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQ 152 (361)
T ss_dssp EEETTTTEEEEEEEEECSS-----SCEEEEEE---CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTC
T ss_pred EEeCCCCcEEEeeEeccCC-----CCcEEEEE---CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCcccc
Confidence 8876 4444444444333 45667777 556555555 68899999997544332221 1
Q ss_pred cCCceeEEEeC-CCcEEEE-EcCCCeEEEEECCCCCC------ce-----eeecCCCCCCCceEEEeecCCCcEEEEEEe
Q 038533 168 HDKEVYDICWG-EARVFAS-VSADGSVRIFDLRDKEH------ST-----IIYESPQPDTPLLRLAWNKQDLRYMATILM 234 (337)
Q Consensus 168 ~~~~v~~~~~~-~~~~l~~-~~~dg~i~iwd~~~~~~------~~-----~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~ 234 (337)
+...+.+++|+ +++++++ ...++.|.+|++..... .. ..... ........++|+| +++++++++.
T Consensus 153 ~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~sp-dg~~l~v~~~ 230 (361)
T 3scy_A 153 TMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKV-APGSGPRHLIFNS-DGKFAYLINE 230 (361)
T ss_dssp SSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEEC-CTTCCEEEEEECT-TSSEEEEEET
T ss_pred CCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceec-CCCCCCeEEEEcC-CCCEEEEEcC
Confidence 12335789999 6775554 44589999999886542 11 11111 2345678999999 9998888875
Q ss_pred cCCEEEEEECCCCCCC--eEEee---cccceeeEEEeCCCCCCeEEEEcC--CCcEEEEeCCCCCCCCCCCCCceeeeeC
Q 038533 235 DSNKVVILDIRSPTLP--VAELE---RHRACVNAIAWAPQSRRHICSVGD--DSQAFIWELPLPPVAGPNGIDPMSMYSA 307 (337)
Q Consensus 235 d~~~i~i~d~~~~~~~--~~~~~---~~~~~v~~~~~~~~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~~~ 307 (337)
....|.+||+.+ +.. +..+. .+...+..++|+|+|+ +|+++.. ++.|.+|++...+.. .........
T Consensus 231 ~~~~v~v~~~~~-g~~~~~~~~~~~~~~~~~~~~i~~spdg~-~l~v~~~~~~~~i~v~~~~~~~g~----~~~~~~~~~ 304 (361)
T 3scy_A 231 IGGTVIAFRYAD-GMLDEIQTVAADTVNAQGSGDIHLSPDGK-YLYASNRLKADGVAIFKVDETNGT----LTKVGYQLT 304 (361)
T ss_dssp TTCEEEEEEEET-TEEEEEEEEESCSSCCCCEEEEEECTTSS-EEEEEECSSSCEEEEEEECTTTCC----EEEEEEEEC
T ss_pred CCCeEEEEEecC-CceEEeEEEecCCCCCCCcccEEECCCCC-EEEEECCCCCCEEEEEEEcCCCCc----EEEeeEecC
Confidence 333499999985 322 22222 2234467999999999 6755554 589999999721110 001111222
Q ss_pred CCceeEEEEccCCCceEEEE-cCCcEEEEe
Q 038533 308 GSEINQLQWSPAQPDWLAIA-FSNKMQLLK 336 (337)
Q Consensus 308 ~~~v~~~~~~~~~~~l~~~~-~d~~i~iw~ 336 (337)
...+.+++|+|+|++|++++ .++.|.+|+
T Consensus 305 g~~~~~~~~spdg~~l~~~~~~~~~v~v~~ 334 (361)
T 3scy_A 305 GIHPRNFIITPNGKYLLVACRDTNVIQIFE 334 (361)
T ss_dssp SSCCCEEEECTTSCEEEEEETTTTEEEEEE
T ss_pred CCCCceEEECCCCCEEEEEECCCCCEEEEE
Confidence 45788999999999888887 678999975
No 145
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.91 E-value=2.7e-22 Score=185.61 Aligned_cols=281 Identities=9% Similarity=0.058 Sum_probs=186.0
Q ss_pred ceeEEEEe--cceEEEeeeecc-----CcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEE
Q 038533 23 PLYAMAVC--GQRIAVGSFIED-----YTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLA 95 (337)
Q Consensus 23 ~v~~~~~s--~~~la~g~~~~~-----~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~ 95 (337)
.|.+++|| |++||+++.+.. +++.+.+|+++........ . ...|...+..++|+||++ .||
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~--~-~~~~~~~~~~~~~SPdG~---------~la 129 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLD--P-PEVSNAKLQYAGWGPKGQ---------QLI 129 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECC--C-TTCCSCCCSBCCBCSSTT---------CEE
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEecc--C-CccccccccccEECCCCC---------EEE
Confidence 48999999 899999875111 1378899988765432111 1 135566699999999999 888
Q ss_pred EeCC-eEEEEecCCCCccceeeecCCCCCc-------------ccCCeeEEEeecCCCCeEEEeeCCC------------
Q 038533 96 SSGD-FLRLWDVGDSSIEPVAVLNNSKSSE-------------FCAPLTSFDWNEIEPKRIGTCSIDT------------ 149 (337)
Q Consensus 96 ~~~~-~v~vw~~~~~~~~~~~~~~~~~~~~-------------~~~~i~~~~~~~~~~~~l~~~~~dg------------ 149 (337)
.+++ .|++|++.+++ .......+.... ....+.+++|+| +++.|++++.++
T Consensus 130 ~~~~~~i~~~~~~~g~--~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~~~~~~~ 206 (723)
T 1xfd_A 130 FIFENNIYYCAHVGKQ--AIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP-DGTRLAYAAINDSRVPIMELPTYT 206 (723)
T ss_dssp EEETTEEEEESSSSSC--CEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT-TSSEEEEEEEECTTSCEEEECCCS
T ss_pred EEECCeEEEEECCCCc--eEEEecCCCCCceECcccceeEEEEeccCcceEEECC-CCCEEEEEEECCCccceEEeeccC
Confidence 8887 99999999884 343333332000 001347899999 999999987553
Q ss_pred ----------------------cEEEEeCCCccchhhhhcc------CCceeEEEeC-CCcEEEEEcC----CCeEEEEE
Q 038533 150 ----------------------TCTIWDIEKGVVETQLIAH------DKEVYDICWG-EARVFASVSA----DGSVRIFD 196 (337)
Q Consensus 150 ----------------------~i~v~d~~~~~~~~~~~~~------~~~v~~~~~~-~~~~l~~~~~----dg~i~iwd 196 (337)
.|++||+.+++....+..+ ...+..++|+ +++++++... +..|.+||
T Consensus 207 ~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d 286 (723)
T 1xfd_A 207 GSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCD 286 (723)
T ss_dssp SSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEE
T ss_pred CcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEe
Confidence 7999999888754555433 5678999999 7877766643 36799999
Q ss_pred CCCCCCceeeecCCCCCCCc----eEEEeecCCCcEEEEE-E-ecC----C-EEEEEECCCCCC--CeEEeecccceeeE
Q 038533 197 LRDKEHSTIIYESPQPDTPL----LRLAWNKQDLRYMATI-L-MDS----N-KVVILDIRSPTL--PVAELERHRACVNA 263 (337)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~i----~~~~~~~~~~~~l~~~-~-~d~----~-~i~i~d~~~~~~--~~~~~~~~~~~v~~ 263 (337)
+.+++........ +...+ ..++|+| +++.|+.. + .++ . .|++||....+. ....+..+...+..
T Consensus 287 ~~~g~~~~~~~~~--~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~ 363 (723)
T 1xfd_A 287 ATTGVCTKKHEDE--SEAWLHRQNEEPVFSK-DGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTK 363 (723)
T ss_dssp TTTCCEEEEEEEE--CSSCCCCCCCCCEECT-TSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEE
T ss_pred CCCCcceEEEEec--cCCEEeccCCCceEcC-CCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEe
Confidence 9988754443222 22233 3789999 88877754 3 344 1 377777323233 13444433344444
Q ss_pred -EEeCCCCCCeEEE-EcCC--CcEEEEeCCCCCCCCCCCCCceeeee---CCCceeEEEEccCCCceEEEE
Q 038533 264 -IAWAPQSRRHICS-VGDD--SQAFIWELPLPPVAGPNGIDPMSMYS---AGSEINQLQWSPAQPDWLAIA 327 (337)
Q Consensus 264 -~~~~~~~~~~l~~-~~~d--g~i~iw~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~ 327 (337)
++|+|+++ .|+. +..+ +.+++|++...... ....+.. |...+..++|+|+++.++...
T Consensus 364 ~~~~spdg~-~l~~~~~~~~~~~~~l~~~~~~~~~-----~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~ 428 (723)
T 1xfd_A 364 ILAYDEKGN-KIYFLSTEDLPRRRQLYSANTVGNF-----NRQCLSCDLVENCTYFSASFSHSMDFFLLKC 428 (723)
T ss_dssp EEEEETTTT-EEEEEESSSCTTCCEEEEECSSTTC-----CCBCSSTTSSSSCCCCEEEECTTSSEEEEEC
T ss_pred eeEEcCCCC-EEEEEEcCCCCcceEEEEEeCCCCC-----CcceecccccCCCCeEEEEECCCCCEEEEEc
Confidence 69999999 6654 4444 88999999732211 1122222 566789999999998877654
No 146
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=3.7e-22 Score=173.03 Aligned_cols=205 Identities=15% Similarity=0.255 Sum_probs=148.6
Q ss_pred CceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCc---------c-eecCCCcCCCCCCCCeEEEecCCCCcccCcC
Q 038533 22 YPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESL---------S-IKTHPSLSFDHPYPPTKLMFDPNSSSRKSSS 89 (337)
Q Consensus 22 ~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~---------~-~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~ 89 (337)
..+..++++ +.+|++|+. ++ ++||+...... . ..........+...|.+++|+|+++
T Consensus 37 ~~~n~lavs~~~~~l~~~~~----dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~------ 105 (434)
T 2oit_A 37 ERSSLLAVSNKYGLVFAGGA----SG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNL------ 105 (434)
T ss_dssp SCCBCEEEETTTTEEEEEET----TE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSC------
T ss_pred CCccEEEEecCCCEEEEECC----CE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCC------
Confidence 358889999 788888884 55 88887542100 1 1111111235677899999999998
Q ss_pred CccEEE----EeC-C-eEEEEecCCC-----Cc----cceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEE
Q 038533 90 NRHLLA----SSG-D-FLRLWDVGDS-----SI----EPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIW 154 (337)
Q Consensus 90 ~~~~l~----~~~-~-~v~vw~~~~~-----~~----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~ 154 (337)
+|+ +++ | .|+|||+.+. +. .....+.+|. ..|.+++|+|.++++|++++.||.|++|
T Consensus 106 ---~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~-----~~V~~v~~~p~~~~~las~s~Dg~v~iw 177 (434)
T 2oit_A 106 ---TLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAG-----GMVIDMKWNPTVPSMVAVCLADGSIAVL 177 (434)
T ss_dssp ---EEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGG-----GSEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred ---EEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCC-----CceEEEEECCCCCCEEEEEECCCeEEEE
Confidence 888 666 4 9999998654 11 1244556676 8999999999448999999999999999
Q ss_pred eCCCccchhhhhccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCC----CCCCCceEEEeecCCCcEE
Q 038533 155 DIEKGVVETQLIAHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESP----QPDTPLLRLAWNKQDLRYM 229 (337)
Q Consensus 155 d~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~l 229 (337)
|++++..+....+|...|.+++|+ ++++|++|+.||.|++||++ ++....+.... .|...+.+++|++ +..++
T Consensus 178 D~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~-~~~~l 255 (434)
T 2oit_A 178 QVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIG-TYVFA 255 (434)
T ss_dssp EESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEE-TTEEE
T ss_pred EcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEec-CceEE
Confidence 999887665566788899999999 79999999999999999998 33222222111 1234789999998 77777
Q ss_pred EEEEecC------CEEEEEECCCC
Q 038533 230 ATILMDS------NKVVILDIRSP 247 (337)
Q Consensus 230 ~~~~~d~------~~i~i~d~~~~ 247 (337)
++.+... ..+++||+++.
T Consensus 256 ~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 256 IVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEccCCCccCCCCceEEEEeccC
Confidence 6544322 13899999864
No 147
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=5.4e-22 Score=163.13 Aligned_cols=214 Identities=12% Similarity=0.129 Sum_probs=159.1
Q ss_pred eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCC-ccchhhhhcc-CCceeEEEe
Q 038533 100 FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEK-GVVETQLIAH-DKEVYDICW 177 (337)
Q Consensus 100 ~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~-~~~~~~~~~~-~~~v~~~~~ 177 (337)
.|++||+.+++ .. .+..|. ..|.+++|+| ++++|++++ ++.|++||+.+ ++.......+ ...+.+++|
T Consensus 23 ~i~~~d~~~~~--~~-~~~~~~-----~~v~~~~~sp-dg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 92 (297)
T 2ojh_A 23 SIEIFNIRTRK--MR-VVWQTP-----ELFEAPNWSP-DGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGI 92 (297)
T ss_dssp EEEEEETTTTE--EE-EEEEES-----SCCEEEEECT-TSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEE
T ss_pred eEEEEeCCCCc--ee-eeccCC-----cceEeeEECC-CCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEE
Confidence 99999999883 33 344455 7899999999 999999987 78999999998 7766555555 367899999
Q ss_pred C-CCcEEEEEc--CCCeEEEE--ECCCCCCceeeecCCCCCCCceEEEeecCCCcEEE-EEEecCCEEEEEECCCCCCCe
Q 038533 178 G-EARVFASVS--ADGSVRIF--DLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMA-TILMDSNKVVILDIRSPTLPV 251 (337)
Q Consensus 178 ~-~~~~l~~~~--~dg~i~iw--d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~-~~~~d~~~i~i~d~~~~~~~~ 251 (337)
+ +++++++++ .++...+| |+.+.+. ..+.. ...+..++|+| ++++|+ ++..++. +++|++.......
T Consensus 93 spdg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~~----~~~~~~~~~sp-dg~~l~~~~~~~~~-~~l~~~~~~~~~~ 165 (297)
T 2ojh_A 93 SPDGALYAISDKVEFGKSAIYLLPSTGGTP-RLMTK----NLPSYWHGWSP-DGKSFTYCGIRDQV-FDIYSMDIDSGVE 165 (297)
T ss_dssp CTTSSEEEEEECTTTSSCEEEEEETTCCCC-EECCS----SSSEEEEEECT-TSSEEEEEEEETTE-EEEEEEETTTCCE
T ss_pred CCCCCEEEEEEeCCCCcceEEEEECCCCce-EEeec----CCCccceEECC-CCCEEEEEECCCCc-eEEEEEECCCCcc
Confidence 9 788999888 33445555 5454442 22221 23588999999 888777 6667776 9999875434456
Q ss_pred EEeecccceeeEEEeCCCCCCeEEEEc-CCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEcC-
Q 038533 252 AELERHRACVNAIAWAPQSRRHICSVG-DDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFS- 329 (337)
Q Consensus 252 ~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d- 329 (337)
..+..+...+.+++|+|+++ .|+.++ .++.+++|+++... .....+..|...+..++|+|+++.|++++.+
T Consensus 166 ~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~ 238 (297)
T 2ojh_A 166 TRLTHGEGRNDGPDYSPDGR-WIYFNSSRTGQMQIWRVRVDG------SSVERITDSAYGDWFPHPSPSGDKVVFVSYDA 238 (297)
T ss_dssp EECCCSSSCEEEEEECTTSS-EEEEEECTTSSCEEEEEETTS------SCEEECCCCSEEEEEEEECTTSSEEEEEEEET
T ss_pred eEcccCCCccccceECCCCC-EEEEEecCCCCccEEEECCCC------CCcEEEecCCcccCCeEECCCCCEEEEEEcCC
Confidence 66777888899999999999 666554 68999999987211 1234555677789999999999988887765
Q ss_pred ----------CcEEEEeC
Q 038533 330 ----------NKMQLLKV 337 (337)
Q Consensus 330 ----------~~i~iw~l 337 (337)
+.|.+|++
T Consensus 239 ~~~~~~~~~~~~l~~~d~ 256 (297)
T 2ojh_A 239 DVFDHPRDLDVRVQLMDM 256 (297)
T ss_dssp TCCSCCSSEEEEEEEEET
T ss_pred CCCcccccCceEEEEEec
Confidence 46888874
No 148
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=7.4e-23 Score=177.40 Aligned_cols=198 Identities=9% Similarity=0.142 Sum_probs=147.5
Q ss_pred CCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccc----------hh-----hhhccCCceeEEEeC-CCcEEE----EE
Q 038533 127 APLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVV----------ET-----QLIAHDKEVYDICWG-EARVFA----SV 186 (337)
Q Consensus 127 ~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~----------~~-----~~~~~~~~v~~~~~~-~~~~l~----~~ 186 (337)
..+..+++++ ++.++++++.++ +++|+...... +. ....+...|.+++|+ ++++|+ ++
T Consensus 37 ~~~n~lavs~-~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 37 ERSSLLAVSN-KYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp SCCBCEEEET-TTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCccEEEEec-CCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 4578899998 889999999887 89987532110 00 001245679999999 788888 78
Q ss_pred cCCCeEEEEECCCC--------CCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeeccc
Q 038533 187 SADGSVRIFDLRDK--------EHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHR 258 (337)
Q Consensus 187 ~~dg~i~iwd~~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~ 258 (337)
+.|+.|++||+++. +..........|...|.+++|+|..+.+|++++.|+. |++||+++. ..+....+|.
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~-v~iwD~~~~-~~~~~~~~~~ 192 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGS-IAVLQVTET-VKVCATLPST 192 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSC-EEEEEESSS-EEEEEEECGG
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCe-EEEEEcCCC-cceeeccCCC
Confidence 89999999998764 2222233444577899999999944899999999999 999999984 4445556788
Q ss_pred ceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeee-------eCCCceeEEEEccCCCceEEEE-cCC
Q 038533 259 ACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMY-------SAGSEINQLQWSPAQPDWLAIA-FSN 330 (337)
Q Consensus 259 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~-~d~ 330 (337)
..|.+++|+|+|+ +|++|+.||.|++||++ ++ ....+. .|...|.+++|++++.++++.+ .||
T Consensus 193 ~~v~~v~wspdg~-~lasgs~dg~v~iwd~~-~~-------~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg 263 (434)
T 2oit_A 193 VAVTSVCWSPKGK-QLAVGKQNGTVVQYLPT-LQ-------EKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADG 263 (434)
T ss_dssp GCEEEEEECTTSS-CEEEEETTSCEEEECTT-CC-------EEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTC
T ss_pred CceeEEEEcCCCC-EEEEEcCCCcEEEEccC-Cc-------ccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCC
Confidence 8999999999999 99999999999999998 11 011111 2334899999999886665543 443
Q ss_pred c------EEEEeC
Q 038533 331 K------MQLLKV 337 (337)
Q Consensus 331 ~------i~iw~l 337 (337)
. +++|++
T Consensus 264 ~~~~~~~v~i~~l 276 (434)
T 2oit_A 264 TLETSPDVVMALL 276 (434)
T ss_dssp CSSSCCEEEEEEC
T ss_pred ccCCCCceEEEEe
Confidence 3 778875
No 149
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.90 E-value=4.3e-22 Score=179.74 Aligned_cols=264 Identities=10% Similarity=0.100 Sum_probs=185.2
Q ss_pred CCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCC-CCCeEEEecCCCCcccCcCCccEEEEe
Q 038533 21 PYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHP-YPPTKLMFDPNSSSRKSSSNRHLLASS 97 (337)
Q Consensus 21 ~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~-~~i~~i~~~~~~~~~~~~~~~~~l~~~ 97 (337)
..+|++++|+ |++||+++. .+|.++||+++.. .... + ..|. ..+..+.|+|+ + +++++
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~---~~g~~~lw~~~~g--~~~~---l-t~~~~~~~~~~~~spd-~---------~l~~~ 81 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGF---SEGSVNAYLYDGG--ETVK---L-NREPINSVLDPHYGVG-R---------VILVR 81 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEE---ETTEEEEEEEETT--EEEE---C-CSSCCSEECEECTTCS-E---------EEEEE
T ss_pred ccchheeecCCCCCeEEEEEc---cCCceeEEEEcCC--CcEe---e-ecccccccccccCCCC-e---------EEEEe
Confidence 5689999999 899998874 4899999998533 2222 1 3444 68999999999 7 66654
Q ss_pred C----C-eEEEEecCC--CCccceeeecCCCCCcccCCeeEEEeecCCCC-eEEEeeCCCcEEEEeCCCccchhhhhccC
Q 038533 98 G----D-FLRLWDVGD--SSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPK-RIGTCSIDTTCTIWDIEKGVVETQLIAHD 169 (337)
Q Consensus 98 ~----~-~v~vw~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~~~~~~~~~~ 169 (337)
+ + ..++|.+.. .. ... .+... ..+...+|+| +++ .+++.+.++.+.+||+.+++...... +.
T Consensus 82 ~~~~g~~~~~l~~~~~~~~g-~~~-~l~~~------~~~~~~~~s~-dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~-~~ 151 (582)
T 3o4h_A 82 DVSKGAEQHALFKVNTSRPG-EEQ-RLEAV------KPMRILSGVD-TGEAVVFTGATEDRVALYALDGGGLRELAR-LP 151 (582)
T ss_dssp ECSTTSCCEEEEEEETTSTT-CCE-ECTTS------CSBEEEEEEE-CSSCEEEEEECSSCEEEEEEETTEEEEEEE-ES
T ss_pred ccCCCCcceEEEEEeccCCC-ccc-cccCC------CCceeeeeCC-CCCeEEEEecCCCCceEEEccCCcEEEeec-CC
Confidence 3 3 556665543 21 112 33222 2344668887 664 34444445556699998887544333 33
Q ss_pred CceeEEEeC-CCcEEEEEcCC----CeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCC-EEEEEE
Q 038533 170 KEVYDICWG-EARVFASVSAD----GSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSN-KVVILD 243 (337)
Q Consensus 170 ~~v~~~~~~-~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~-~i~i~d 243 (337)
. .+++|+ +++++++++.+ +.|++||+.+++.... . .+...+..++|+| +++.|+++..++. .|++||
T Consensus 152 ~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l-~---~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~i~~~d 224 (582)
T 3o4h_A 152 G--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVF-D---SGEGSFSSASISP-GMKVTAGLETAREARLVTVD 224 (582)
T ss_dssp S--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEE-C---CSSCEEEEEEECT-TSCEEEEEECSSCEEEEEEC
T ss_pred C--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEe-e---cCCCccccceECC-CCCEEEEccCCCeeEEEEEc
Confidence 3 789999 89999988877 7899999998875422 2 3456789999999 9999997777761 399999
Q ss_pred CCCCCCCeEEeecccceeeEEE--------eCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEE
Q 038533 244 IRSPTLPVAELERHRACVNAIA--------WAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQ 315 (337)
Q Consensus 244 ~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 315 (337)
+.+ ++.. .+..|...+..++ |+|+|. ++++++.|+.+++|++ ++. .. .....+.+++
T Consensus 225 ~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~--g~~--------~~--~~~~~v~~~~ 289 (582)
T 3o4h_A 225 PRD-GSVE-DLELPSKDFSSYRPTAITWLGYLPDGR-LAVVARREGRSAVFID--GER--------VE--APQGNHGRVV 289 (582)
T ss_dssp TTT-CCEE-ECCCSCSHHHHHCCSEEEEEEECTTSC-EEEEEEETTEEEEEET--TEE--------EC--CCSSEEEEEE
T ss_pred CCC-CcEE-EccCCCcChhhhhhccccceeEcCCCc-EEEEEEcCCcEEEEEE--CCe--------ec--cCCCceEEEE
Confidence 987 4444 6667777777777 999996 9999999999999999 231 11 2346788999
Q ss_pred EccCCCceEEEEcCC---cEEEEe
Q 038533 316 WSPAQPDWLAIAFSN---KMQLLK 336 (337)
Q Consensus 316 ~~~~~~~l~~~~~d~---~i~iw~ 336 (337)
|+ +++.+++++.+. .+.+|+
T Consensus 290 ~s-dg~~l~~~s~~~~p~~l~~~d 312 (582)
T 3o4h_A 290 LW-RGKLVTSHTSLSTPPRIVSLP 312 (582)
T ss_dssp EE-TTEEEEEEEETTEEEEEEEET
T ss_pred ec-CCEEEEEEcCCCCCCeEEEEc
Confidence 99 888777777664 355544
No 150
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.90 E-value=3.1e-21 Score=161.61 Aligned_cols=227 Identities=7% Similarity=-0.026 Sum_probs=161.9
Q ss_pred cEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeC-CCcEEEEeCCCccc-hhhhhc
Q 038533 92 HLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSI-DTTCTIWDIEKGVV-ETQLIA 167 (337)
Q Consensus 92 ~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-dg~i~v~d~~~~~~-~~~~~~ 167 (337)
.++++++ + .|.+||+.+++ ....+..+. ..+ .++|+| +++++++++. ++.|.+||+.+++. ...+..
T Consensus 11 ~~~v~~~~~~~v~~~d~~~~~--~~~~~~~~~-----~~~-~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 11 FGIVVEQHLRRISFFSTDTLE--ILNQITLGY-----DFV-DTAITS-DCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp EEEEEEGGGTEEEEEETTTCC--EEEEEECCC-----CEE-EEEECS-SSCEEEEEESTTCEEEEEECSSSSCEEEEEEE
T ss_pred EEEEEecCCCeEEEEeCcccc--eeeeEEccC-----Ccc-eEEEcC-CCCEEEEEeCCCCeEEEEECCCCceeEEeccc
Confidence 4666666 4 99999999984 444444433 556 999999 8886655554 88999999999887 666666
Q ss_pred cCCceeEEEeC-CCcEEEEEcCCC---eEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCE-EEEE
Q 038533 168 HDKEVYDICWG-EARVFASVSADG---SVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNK-VVIL 242 (337)
Q Consensus 168 ~~~~v~~~~~~-~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~-i~i~ 242 (337)
+..+..+++|+ ++++++++..++ .|.+||+.+++....+.. .....+++|+| +++++++++.+... |.+|
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~----~~~~~~~~~sp-dg~~l~~~~~~~~~~i~~~ 156 (331)
T 3u4y_A 82 GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI----PYDAVGIAISP-NGNGLILIDRSSANTVRRF 156 (331)
T ss_dssp CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC----CTTEEEEEECT-TSSCEEEEEETTTTEEEEE
T ss_pred CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC----CCCccceEECC-CCCEEEEEecCCCceEEEE
Confidence 66665559999 788888555543 899999998875554432 24568999999 88877777666555 9999
Q ss_pred ECCCCCCCeE---EeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccC
Q 038533 243 DIRSPTLPVA---ELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPA 319 (337)
Q Consensus 243 d~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 319 (337)
++...+.... ........+..++|+|+++.+++++..++.|.+||+..++.. ...........+..++|+|+
T Consensus 157 ~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~-----~~~~~~~~~~~~~~~~~spd 231 (331)
T 3u4y_A 157 KIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENI-----TLLNAVGTNNLPGTIVVSRD 231 (331)
T ss_dssp EECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSC-----EEEEEEECSSCCCCEEECTT
T ss_pred EECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCccc-----ceeeeccCCCCCceEEECCC
Confidence 9986443211 111234567899999999845566667899999999833210 01333335567889999999
Q ss_pred CCceEEEE-cCCcEEEEeC
Q 038533 320 QPDWLAIA-FSNKMQLLKV 337 (337)
Q Consensus 320 ~~~l~~~~-~d~~i~iw~l 337 (337)
|+++++++ .++.|.+|++
T Consensus 232 g~~l~v~~~~~~~i~~~d~ 250 (331)
T 3u4y_A 232 GSTVYVLTESTVDVFNFNQ 250 (331)
T ss_dssp SSEEEEECSSEEEEEEEET
T ss_pred CCEEEEEEcCCCEEEEEEC
Confidence 99777665 5788999974
No 151
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.90 E-value=4.2e-21 Score=161.89 Aligned_cols=278 Identities=11% Similarity=0.091 Sum_probs=172.8
Q ss_pred EEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eE
Q 038533 26 AMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FL 101 (337)
Q Consensus 26 ~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v 101 (337)
.++++ +.++++++. ++.|.+||.......... ..+....+..++|+|+++ .+++++. + .|
T Consensus 4 g~~~~~~~~~~v~~~~----~~~v~~~d~~~~~~~~~~----~~~~~~~~~~~~~s~dg~--------~~~v~~~~~~~i 67 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNY----PNNLHVVDVASDTVYKSC----VMPDKFGPGTAMMAPDNR--------TAYVLNNHYGDI 67 (349)
T ss_dssp CCCCCTTCEEEEEEET----TTEEEEEETTTTEEEEEE----ECSSCCSSCEEEECTTSS--------EEEEEETTTTEE
T ss_pred cccccCCCEEEEEeCC----CCeEEEEECCCCcEEEEE----ecCCCCCCceeEECCCCC--------EEEEEeCCCCcE
Confidence 34566 667777775 999999987654322221 122223688999999997 3445554 4 99
Q ss_pred EEEecCCCCccceeeecCCC-CCcccCCeeEEEeecCCCCeEEEeeCC------------CcEEEEeCCCccchhhhh--
Q 038533 102 RLWDVGDSSIEPVAVLNNSK-SSEFCAPLTSFDWNEIEPKRIGTCSID------------TTCTIWDIEKGVVETQLI-- 166 (337)
Q Consensus 102 ~vw~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~l~~~~~d------------g~i~v~d~~~~~~~~~~~-- 166 (337)
.+||+.++ +....+.... .......+.+++|+| +++++++++.+ +.|.+||+.+++....+.
T Consensus 68 ~~~d~~t~--~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~ 144 (349)
T 1jmx_B 68 YGIDLDTC--KNTFHANLSSVPGEVGRSMYSFAISP-DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF 144 (349)
T ss_dssp EEEETTTT--EEEEEEESCCSTTEEEECSSCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE
T ss_pred EEEeCCCC--cEEEEEEcccccccccccccceEECC-CCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeec
Confidence 99999988 4444444221 000013378899999 99999988865 899999998865433222
Q ss_pred ccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCC---------------------CceEEEeecC
Q 038533 167 AHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDT---------------------PLLRLAWNKQ 224 (337)
Q Consensus 167 ~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~---------------------~i~~~~~~~~ 224 (337)
.+...+.+++|+ +++ +++++. .|.+||+.+++....+........ ....+++++
T Consensus 145 ~~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 220 (349)
T 1jmx_B 145 PMPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFK- 220 (349)
T ss_dssp ECCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC--
T ss_pred cCCCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecC-
Confidence 234468899999 677 555543 499999998875443322100000 123344443
Q ss_pred CCcEEEEEEecCCEEEEEECCCCCCCeEEeecccceeeEEEeCC-CCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCcee
Q 038533 225 DLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAP-QSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMS 303 (337)
Q Consensus 225 ~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~ 303 (337)
++............+..+|..+.......+..+...+..++|+| +++ +++++ ++.|.+||+...+ ...
T Consensus 221 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~-~l~~~--~~~v~~~d~~~~~--------~~~ 289 (349)
T 1jmx_B 221 DDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPN-QIYGV--LNRLAKYDLKQRK--------LIK 289 (349)
T ss_dssp ------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTT-EEEEE--ESEEEEEETTTTE--------EEE
T ss_pred CCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCC-EEEEE--cCeEEEEECccCe--------EEE
Confidence 22111000001111333566553322222333556788999999 998 77777 8899999998221 222
Q ss_pred eeeCCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 304 MYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 304 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
.......+.+++|+|+++.|++++.++.|++|++
T Consensus 290 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~ 323 (349)
T 1jmx_B 290 AANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNP 323 (349)
T ss_dssp EEECSSCCCEEEECSSSSCEEEESBSSEEEEEET
T ss_pred EEcCCCCccceEECCCCCEEEEecCCCeEEEEec
Confidence 3334456789999999998998888999999985
No 152
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.89 E-value=5.2e-21 Score=162.56 Aligned_cols=278 Identities=10% Similarity=0.114 Sum_probs=181.1
Q ss_pred eEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeCC-eEEEEecC-CCC
Q 038533 33 RIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSGD-FLRLWDVG-DSS 110 (337)
Q Consensus 33 ~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~~-~v~vw~~~-~~~ 110 (337)
+|++|+.. .++.|.+|+++..++.+.............+..++|+|+++ +|++++. .|.+|++. +++
T Consensus 4 ~~~vg~~~--~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~---------~l~~~~~~~v~~~~~~~~g~ 72 (365)
T 1jof_A 4 HLMIGTWT--PPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERK---------NIYGAAMKKWSSFAVKSPTE 72 (365)
T ss_dssp EEEEEESS--SSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSS---------EEEEEEBTEEEEEEEEETTE
T ss_pred EEEEEEcc--CCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCC---------EEEEEccceEEEEEECCCCC
Confidence 56677741 12579999988766655431111113445688999999998 7777764 99999997 663
Q ss_pred ccceeeecCCCCCcccCCeeEEEeecCCCCe--EEEee-------------CCCcEEEEeCC-Cccchhhhh----ccCC
Q 038533 111 IEPVAVLNNSKSSEFCAPLTSFDWNEIEPKR--IGTCS-------------IDTTCTIWDIE-KGVVETQLI----AHDK 170 (337)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--l~~~~-------------~dg~i~v~d~~-~~~~~~~~~----~~~~ 170 (337)
.........+ +.+.+++|+| +++. +++++ .+|.+.+|++. +++....+. .+..
T Consensus 73 ~~~~~~~~~~------g~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~ 145 (365)
T 1jof_A 73 IVHEASHPIG------GHPRANDADT-NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENT 145 (365)
T ss_dssp EEEEEEEECC------SSGGGGCTTS-CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTC
T ss_pred EEEeeEeecC------CCCccEEECC-CCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCC
Confidence 2222222111 2245689999 8884 55553 68999999997 455433332 2456
Q ss_pred ceeEEEeC-CCcEEEEEc-CCCeEEEEECC-CCCCcee-eecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCC
Q 038533 171 EVYDICWG-EARVFASVS-ADGSVRIFDLR-DKEHSTI-IYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRS 246 (337)
Q Consensus 171 ~v~~~~~~-~~~~l~~~~-~dg~i~iwd~~-~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~ 246 (337)
.+.+++|+ ++++++++. .++.|++||+. +++.... ....+.+......++|+| +++++++++.....|.+|++..
T Consensus 146 ~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~ 224 (365)
T 1jof_A 146 GIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHP-TGNYLYALMEAGNRICEYVIDP 224 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECT
T ss_pred cceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECC-CCCEEEEEECCCCeEEEEEEeC
Confidence 78999999 687777665 46899999998 5553221 111111245689999999 9999988876544599998753
Q ss_pred C-CCCe---EEee-------cccc------eeeEEE-eCCCCCCeEEEEcCC-C-----cEEEEeCCCCCCCCCCCCCce
Q 038533 247 P-TLPV---AELE-------RHRA------CVNAIA-WAPQSRRHICSVGDD-S-----QAFIWELPLPPVAGPNGIDPM 302 (337)
Q Consensus 247 ~-~~~~---~~~~-------~~~~------~v~~~~-~~~~~~~~l~~~~~d-g-----~i~iw~~~~~~~~~~~~~~~~ 302 (337)
. ++.. ..+. +|.. .+..++ |+|+|+ +|++++.+ + .|.+|++. ... . ..
T Consensus 225 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~-~l~v~~~~~~~~~~~~i~v~~~~--~~g----~-~~ 296 (365)
T 1jof_A 225 ATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGK-YMFASSRANKFELQGYIAGFKLR--DCG----S-IE 296 (365)
T ss_dssp TTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSS-EEEEEEEESSTTSCCEEEEEEEC--TTS----C-EE
T ss_pred CCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCC-EEEEECCCCCCCCCCeEEEEEEC--CCC----C-EE
Confidence 1 2221 1121 1222 578999 999999 77666533 2 89999997 211 1 11
Q ss_pred e----eeeCCCceeEEEEcc---CCCceEEEEc-CCcEEEEeC
Q 038533 303 S----MYSAGSEINQLQWSP---AQPDWLAIAF-SNKMQLLKV 337 (337)
Q Consensus 303 ~----~~~~~~~v~~~~~~~---~~~~l~~~~~-d~~i~iw~l 337 (337)
. ...+...+..++|+| +|++|++++. ++.|++|++
T Consensus 297 ~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~ 339 (365)
T 1jof_A 297 KQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRW 339 (365)
T ss_dssp EEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEE
T ss_pred EeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEE
Confidence 1 222455678899999 8988888876 489999974
No 153
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.89 E-value=7.3e-21 Score=160.71 Aligned_cols=236 Identities=11% Similarity=0.097 Sum_probs=170.6
Q ss_pred CCCCCeEEEecCCCCcccCcCCccEEEEeC--------C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCC
Q 038533 69 HPYPPTKLMFDPNSSSRKSSSNRHLLASSG--------D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEP 139 (337)
Q Consensus 69 ~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~--------~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 139 (337)
....+..++|+|+++ .+++++ + .|.+||..++ +....+... ..+..++|+| ++
T Consensus 39 ~~~~~~~~~~s~dg~---------~l~~~~~~~~~~~~~~~v~~~d~~~~--~~~~~~~~~------~~~~~~~~s~-dg 100 (353)
T 3vgz_A 39 VGKGAYEMAYSQQEN---------ALWLATSQSRKLDKGGVVYRLDPVTL--EVTQAIHND------LKPFGATINN-TT 100 (353)
T ss_dssp EESSEEEEEEETTTT---------EEEEEECCCTTTEESEEEEEECTTTC--CEEEEEEES------SCCCSEEEET-TT
T ss_pred hccCccceEECCCCC---------EEEEEcCCCcCCCCCccEEEEcCCCC--eEEEEEecC------CCcceEEECC-CC
Confidence 345678999999998 555543 4 8999999988 445555432 4567899999 87
Q ss_pred C-eEEEeeCCCcEEEEeCCCccchhhhhccCC---------ceeEEEeC-CCcEEEEEc--CCCeEEEEECCCCCCceee
Q 038533 140 K-RIGTCSIDTTCTIWDIEKGVVETQLIAHDK---------EVYDICWG-EARVFASVS--ADGSVRIFDLRDKEHSTII 206 (337)
Q Consensus 140 ~-~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~---------~v~~~~~~-~~~~l~~~~--~dg~i~iwd~~~~~~~~~~ 206 (337)
+ ++++...++.|.+||..+++.+..+..+.. .+.+++|+ +++.+++++ .++.|.+||+.+++....+
T Consensus 101 ~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~ 180 (353)
T 3vgz_A 101 QTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAI 180 (353)
T ss_dssp TEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred CEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEe
Confidence 7 455556679999999999987776654332 26889999 677666665 4789999999988754443
Q ss_pred ecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeec----ccceeeEEEeCCCCCCeEEEEcCCCc
Q 038533 207 YESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELER----HRACVNAIAWAPQSRRHICSVGDDSQ 282 (337)
Q Consensus 207 ~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~~~~~dg~ 282 (337)
. .+...+..++|+| +++++++++.++. |.+||+.+ .+.+..+.. +...+..++|+|+++.++++...++.
T Consensus 181 ~---~~~~~~~~~~~s~-dg~~l~~~~~~~~-i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 254 (353)
T 3vgz_A 181 Q---NTGKMSTGLALDS-EGKRLYTTNADGE-LITIDTAD-NKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAE 254 (353)
T ss_dssp C---CCCTTCCCCEEET-TTTEEEEECTTSE-EEEEETTT-TEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSE
T ss_pred c---CCCCccceEEECC-CCCEEEEEcCCCe-EEEEECCC-CeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCE
Confidence 2 1234578899999 9999999888887 99999987 444555543 44567889999999934444445699
Q ss_pred EEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEE-cCCcEEEEeC
Q 038533 283 AFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIA-FSNKMQLLKV 337 (337)
Q Consensus 283 i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iw~l 337 (337)
|.+||...++ ......... ...++|+|+++.+++++ .++.|.+|++
T Consensus 255 v~~~d~~~~~--------~~~~~~~~~-~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 301 (353)
T 3vgz_A 255 VLVVDTRNGN--------ILAKVAAPE-SLAVLFNPARNEAYVTHRQAGKVSVIDA 301 (353)
T ss_dssp EEEEETTTCC--------EEEEEECSS-CCCEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEEEECCCCc--------EEEEEEcCC-CceEEECCCCCEEEEEECCCCeEEEEEC
Confidence 9999998322 221111222 36799999998777666 6899999984
No 154
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.89 E-value=3.4e-21 Score=184.80 Aligned_cols=268 Identities=9% Similarity=0.003 Sum_probs=198.0
Q ss_pred CCceeEEEEe---cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCC-CCeEEEecCCCCcccCcCCccEEEE
Q 038533 21 PYPLYAMAVC---GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPY-PPTKLMFDPNSSSRKSSSNRHLLAS 96 (337)
Q Consensus 21 ~~~v~~~~~s---~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~-~i~~i~~~~~~~~~~~~~~~~~l~~ 96 (337)
...+.+++|+ |++||+++ ++.|.+|+..... ... ...|.. .+..++|+ +++ .|+.
T Consensus 295 ~~~v~~~~~S~pdG~~la~~~-----~~~i~~~~~~~~~--~~~----~~~~~~~~~~~~~~s-dg~---------~l~~ 353 (1045)
T 1k32_A 295 IPSKFAEDFSPLDGDLIAFVS-----RGQAFIQDVSGTY--VLK----VPEPLRIRYVRRGGD-TKV---------AFIH 353 (1045)
T ss_dssp CGGGGEEEEEECGGGCEEEEE-----TTEEEEECTTSSB--EEE----CSCCSCEEEEEECSS-SEE---------EEEE
T ss_pred ccccceeeecCCCCCEEEEEE-----cCEEEEEcCCCCc--eEE----ccCCCcceEEeeeEc-CCC---------eEEE
Confidence 3468999997 77899988 7889997765432 222 146666 89999999 888 7777
Q ss_pred eCC--eEE-EEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCcee
Q 038533 97 SGD--FLR-LWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVY 173 (337)
Q Consensus 97 ~~~--~v~-vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~ 173 (337)
+++ .+. +|++.+++ . ..+.+|. ..+..++|+| +++.|++++.++.|++||+.+++.......|...+.
T Consensus 354 ~s~~~~l~~~~d~~~~~--~-~~l~~~~-----~~~~~~~~Sp-DG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~ 424 (1045)
T 1k32_A 354 GTREGDFLGIYDYRTGK--A-EKFEENL-----GNVFAMGVDR-NGKFAVVANDRFEIMTVDLETGKPTVIERSREAMIT 424 (1045)
T ss_dssp EETTEEEEEEEETTTCC--E-EECCCCC-----CSEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCC
T ss_pred EECCCceEEEEECCCCC--c-eEecCCc-----cceeeeEECC-CCCEEEEECCCCeEEEEECCCCceEEeccCCCCCcc
Confidence 664 888 89998773 2 2333665 7899999999 999999999999999999999887776667888999
Q ss_pred EEEeC-CCcEEEEEcCCC----------eEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEE
Q 038533 174 DICWG-EARVFASVSADG----------SVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVIL 242 (337)
Q Consensus 174 ~~~~~-~~~~l~~~~~dg----------~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~ 242 (337)
+++|+ ++++|++++.++ .|++||+.+++ ...+ ..+...+..++|+| ++++|++++.++. ..+|
T Consensus 425 ~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l---~~~~~~~~~~~~sp-dG~~l~~~s~~~~-~~~~ 498 (1045)
T 1k32_A 425 DFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAA---TTENSHDYAPAFDA-DSKNLYYLSYRSL-DPSP 498 (1045)
T ss_dssp CEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEEC---SCSSSBEEEEEECT-TSCEEEEEESCCC-CCEE
T ss_pred ceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEe---eCCCcccCCceEcC-CCCEEEEEecccC-CcCc
Confidence 99999 788888887644 89999998875 2222 23456788899999 9999999887665 6666
Q ss_pred ECCCCC------------------------------------------CCeEEeecccceeeEEEeCCCCCCeEEE----
Q 038533 243 DIRSPT------------------------------------------LPVAELERHRACVNAIAWAPQSRRHICS---- 276 (337)
Q Consensus 243 d~~~~~------------------------------------------~~~~~~~~~~~~v~~~~~~~~~~~~l~~---- 276 (337)
+..... ..+..+..|...+..++++|++. ++++
T Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~-~~~~~~~~ 577 (1045)
T 1k32_A 499 DRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSI-LIYSVPVH 577 (1045)
T ss_dssp CSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEE-EEEECCCC
T ss_pred chhccccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCe-EEEEeccc
Confidence 532210 01223344567788999999998 6765
Q ss_pred ---------EcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 277 ---------VGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 277 ---------~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
......|.+||+..++ ...+. ..+..++|+|||+.|++++.+ .+++|++
T Consensus 578 g~~~~~~~~~~~~~~l~~~d~~~~~--------~~~l~---~~v~~~~~S~DG~~l~~~~~~-~i~~~d~ 635 (1045)
T 1k32_A 578 GEFAAYYQGAPEKGVLLKYDVKTRK--------VTEVK---NNLTDLRLSADRKTVMVRKDD-GKIYTFP 635 (1045)
T ss_dssp CSHHHHHHCCCCCEEEEEEETTTCC--------EEEEE---EEEEEEEECTTSCEEEEEETT-SCEEEEE
T ss_pred CcccccccccCCCceEEEEECCCCc--------EEEee---cCcceEEECCCCCEEEEEcCC-cEEEEeC
Confidence 1224567788887221 22222 568899999999988887766 8999974
No 155
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.87 E-value=1.1e-20 Score=170.53 Aligned_cols=229 Identities=7% Similarity=0.034 Sum_probs=160.8
Q ss_pred CCCCeEEEecCCCCcccCcCCccEEEEeC--C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEee
Q 038533 70 PYPPTKLMFDPNSSSRKSSSNRHLLASSG--D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCS 146 (337)
Q Consensus 70 ~~~i~~i~~~~~~~~~~~~~~~~~l~~~~--~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~ 146 (337)
..+|.+++|+||++ .||.++ + +++||++.++ +..+....+. ..+..++|+| + +++++++
T Consensus 21 ~~~~~~~~~~~DG~---------~la~~s~~~g~~~lw~~~~g--~~~~lt~~~~-----~~~~~~~~sp-d-~~l~~~~ 82 (582)
T 3o4h_A 21 AVEKYSLQGVVDGD---------KLLVVGFSEGSVNAYLYDGG--ETVKLNREPI-----NSVLDPHYGV-G-RVILVRD 82 (582)
T ss_dssp HSCEEEEEEEETTT---------EEEEEEEETTEEEEEEEETT--EEEECCSSCC-----SEECEECTTC-S-EEEEEEE
T ss_pred ccchheeecCCCCC---------eEEEEEccCCceeEEEEcCC--CcEeeecccc-----cccccccCCC-C-eEEEEec
Confidence 45799999999999 888765 5 9999999776 3333333332 4788999998 7 7777776
Q ss_pred C---CCcEEEEeCCC---ccchhhhhccCCceeEEEeC-CC-cEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceE
Q 038533 147 I---DTTCTIWDIEK---GVVETQLIAHDKEVYDICWG-EA-RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLR 218 (337)
Q Consensus 147 ~---dg~i~v~d~~~---~~~~~~~~~~~~~v~~~~~~-~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~ 218 (337)
. +...++|.+.. +... .+.... .+...+|+ ++ ..+++.+.++.+.+||+.+++........ . .+
T Consensus 83 ~~~g~~~~~l~~~~~~~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~----~--~~ 154 (582)
T 3o4h_A 83 VSKGAEQHALFKVNTSRPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP----G--FG 154 (582)
T ss_dssp CSTTSCCEEEEEEETTSTTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES----S--CE
T ss_pred cCCCCcceEEEEEeccCCCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC----C--ce
Confidence 5 45566655433 2222 222221 23345666 44 33344444445559999887643333211 2 88
Q ss_pred EEeecCCCcEEEEEEec----CCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCC--cEEEEeCCCCC
Q 038533 219 LAWNKQDLRYMATILMD----SNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDS--QAFIWELPLPP 292 (337)
Q Consensus 219 ~~~~~~~~~~l~~~~~d----~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg--~i~iw~~~~~~ 292 (337)
++|+| +|++|++++.+ .. |++||+.+ ++ ...+..|...+..++|+|||+ .|+++..++ .|++||+..++
T Consensus 155 ~~~sp-DG~~la~~~~~~~~~~~-i~~~d~~~-g~-~~~l~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~i~~~d~~~~~ 229 (582)
T 3o4h_A 155 FVSDI-RGDLIAGLGFFGGGRVS-LFTSNLSS-GG-LRVFDSGEGSFSSASISPGMK-VTAGLETAREARLVTVDPRDGS 229 (582)
T ss_dssp EEEEE-ETTEEEEEEEEETTEEE-EEEEETTT-CC-CEEECCSSCEEEEEEECTTSC-EEEEEECSSCEEEEEECTTTCC
T ss_pred EEECC-CCCEEEEEEEcCCCCeE-EEEEcCCC-CC-ceEeecCCCccccceECCCCC-EEEEccCCCeeEEEEEcCCCCc
Confidence 99999 99999988777 55 99999987 43 456778888999999999999 888888888 89999998222
Q ss_pred CCCCCCCCceeeeeCCCceeEEE--------EccCCCceEEEEcCCcEEEEeC
Q 038533 293 VAGPNGIDPMSMYSAGSEINQLQ--------WSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~l~~~~~d~~i~iw~l 337 (337)
......|...+..++ |+|||..+++++.|+.+++|++
T Consensus 230 --------~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 230 --------VEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp --------EEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred --------EEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 224556666777777 9999966667788999999985
No 156
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.87 E-value=1.6e-19 Score=152.24 Aligned_cols=254 Identities=7% Similarity=0.095 Sum_probs=165.5
Q ss_pred eeCCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEE
Q 038533 18 HESPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLA 95 (337)
Q Consensus 18 ~~~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~ 95 (337)
..+...+..++|+ ++ |++++. .+.++.|.+|+++........ .+ ..+...+..++|+|+++ +|+
T Consensus 36 ~~~~~~p~~~a~spdg~-l~~~~~-~~~~~~v~~~~~~~g~~~~~~--~~-~~~~~~p~~~a~spdg~---------~l~ 101 (347)
T 3hfq_A 36 LAATQNPTYLALSAKDC-LYSVDK-EDDEGGIAAWQIDGQTAHKLN--TV-VAPGTPPAYVAVDEARQ---------LVY 101 (347)
T ss_dssp EEECSCCCCEEECTTCE-EEEEEE-ETTEEEEEEEEEETTEEEEEE--EE-EEESCCCSEEEEETTTT---------EEE
T ss_pred eeccCCcceEEEccCCe-EEEEEe-cCCCceEEEEEecCCcEEEee--ee-ecCCCCCEEEEECCCCC---------EEE
Confidence 3445667889999 66 665553 122589999999654432222 11 34667889999999998 666
Q ss_pred EeC--C-eEEEEecC-CCCccceeeecCCCCC----cccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCC-Cccchh--h
Q 038533 96 SSG--D-FLRLWDVG-DSSIEPVAVLNNSKSS----EFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIE-KGVVET--Q 164 (337)
Q Consensus 96 ~~~--~-~v~vw~~~-~~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~-~~~~~~--~ 164 (337)
+++ + .|.+|++. ++....+..+...... .....+.+++|+| +++++++...++.|.+|++. +++... .
T Consensus 102 ~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~sp-dg~l~v~~~~~~~v~~~~~~~~g~~~~~~~ 180 (347)
T 3hfq_A 102 SANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTP-DNRLAVIDLGSDKVYVYNVSDAGQLSEQSV 180 (347)
T ss_dssp EEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECT-TSCEEEEETTTTEEEEEEECTTSCEEEEEE
T ss_pred EEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECC-CCcEEEEeCCCCEEEEEEECCCCcEEEeee
Confidence 554 3 99999996 3333333333221100 0113588999999 88877777778899999998 443221 1
Q ss_pred hhc-cCCceeEEEeC-CCcEEEE-EcCCCeEEEEECCC--CCCce--eeecCCC---CCCCceEEEeecCCCcEEEEEEe
Q 038533 165 LIA-HDKEVYDICWG-EARVFAS-VSADGSVRIFDLRD--KEHST--IIYESPQ---PDTPLLRLAWNKQDLRYMATILM 234 (337)
Q Consensus 165 ~~~-~~~~v~~~~~~-~~~~l~~-~~~dg~i~iwd~~~--~~~~~--~~~~~~~---~~~~i~~~~~~~~~~~~l~~~~~ 234 (337)
+.. ....+..++|+ +++++++ ...++.+.+|++.. ++... .....+. ....+..++|+| ++++|++++.
T Consensus 181 ~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~sp-dG~~l~v~~~ 259 (347)
T 3hfq_A 181 LTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSH-DGHFLYVSNR 259 (347)
T ss_dssp EECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECT-TSCEEEEEEE
T ss_pred EEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECC-CCCEEEEEeC
Confidence 121 22357789999 6775554 56789999999875 32111 1111110 113578899999 9998866555
Q ss_pred -cCCEEEEEECCCCC--CCeEEeecccceeeEEEeCCCCCCeEEEEc-CCCcEEEEeCC
Q 038533 235 -DSNKVVILDIRSPT--LPVAELERHRACVNAIAWAPQSRRHICSVG-DDSQAFIWELP 289 (337)
Q Consensus 235 -d~~~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~iw~~~ 289 (337)
++. |.+||+...+ ..+..+..+...+..++|+|+++ +|++++ .++.|.+|+++
T Consensus 260 ~~~~-v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~-~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 260 GYNT-LAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEA-FVVVVNQNTDNATLYARD 316 (347)
T ss_dssp TTTE-EEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSS-EEEEEETTTTEEEEEEEC
T ss_pred CCCE-EEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCC-EEEEEEcCCCcEEEEEEe
Confidence 555 9999997422 33445555556789999999999 676665 45899999776
No 157
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.86 E-value=2e-20 Score=173.00 Aligned_cols=273 Identities=9% Similarity=0.078 Sum_probs=180.3
Q ss_pred eEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCC---CCeEEEecCCCCcccCcCCccEEEEeC-
Q 038533 25 YAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPY---PPTKLMFDPNSSSRKSSSNRHLLASSG- 98 (337)
Q Consensus 25 ~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~---~i~~i~~~~~~~~~~~~~~~~~l~~~~- 98 (337)
.+++|+ +++++++ . |+.|++|+.......... ..+.. .+.+++||||++ +|+.++
T Consensus 19 ~~~~~s~dg~~~~~~-~----d~~i~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~SpDg~---------~la~~~~ 79 (719)
T 1z68_A 19 FFPNWISGQEYLHQS-A----DNNIVLYNIETGQSYTIL-----SNRTMKSVNASNYGLSPDRQ---------FVYLESD 79 (719)
T ss_dssp CCCEESSSSEEEEEC-T----TSCEEEEESSSCCEEEEE-----CHHHHHTTTCSEEEECTTSS---------EEEEEEE
T ss_pred CccEECCCCeEEEEc-C----CCCEEEEEcCCCcEEEEE-----ccccccccceeeEEECCCCC---------eEEEEec
Confidence 478898 6555544 3 899999998765543332 22222 489999999999 776653
Q ss_pred ---------C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhh-hc
Q 038533 99 ---------D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQL-IA 167 (337)
Q Consensus 99 ---------~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~-~~ 167 (337)
+ .|++||+.+++......+. ..+..++||| +++.|+.+. ++.|++||+.+++..... .+
T Consensus 80 ~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~--------~~~~~~~~SP-DG~~la~~~-~~~i~~~~~~~g~~~~l~~~~ 149 (719)
T 1z68_A 80 YSKLWRYSYTATYYIYDLSNGEFVRGNELP--------RPIQYLCWSP-VGSKLAYVY-QNNIYLKQRPGDPPFQITFNG 149 (719)
T ss_dssp EEECSSSCEEEEEEEEETTTTEECCSSCCC--------SSBCCEEECS-STTCEEEEE-TTEEEEESSTTSCCEECCCCC
T ss_pred CceeEEeecceEEEEEECCCCccccceecC--------cccccceECC-CCCEEEEEE-CCeEEEEeCCCCCcEEEecCC
Confidence 4 8999999988421002221 4588899999 999999986 789999999887654322 22
Q ss_pred cCCce-----------------eEEEeC-CCcEEEEEcCCC----------------------------------eEEEE
Q 038533 168 HDKEV-----------------YDICWG-EARVFASVSADG----------------------------------SVRIF 195 (337)
Q Consensus 168 ~~~~v-----------------~~~~~~-~~~~l~~~~~dg----------------------------------~i~iw 195 (337)
+...+ .+++|+ +++.|++++.|. .|++|
T Consensus 150 ~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~ 229 (719)
T 1z68_A 150 RENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFII 229 (719)
T ss_dssp BTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEE
T ss_pred CcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEE
Confidence 22222 489999 789999887552 78899
Q ss_pred ECCCCCCc--eeeec---CCCCCCCceEEEeecCCCcEEEEEEecC---CEEEEEE----CCCCCCCeEEe----ecccc
Q 038533 196 DLRDKEHS--TIIYE---SPQPDTPLLRLAWNKQDLRYMATILMDS---NKVVILD----IRSPTLPVAEL----ERHRA 259 (337)
Q Consensus 196 d~~~~~~~--~~~~~---~~~~~~~i~~~~~~~~~~~~l~~~~~d~---~~i~i~d----~~~~~~~~~~~----~~~~~ 259 (337)
|+.+++.. ..+.. ...+...+..++|+| +++++++....+ ..|.+|| ..+ ++....+ ..|..
T Consensus 230 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp-D~~~~~~~~~~~~~~~~l~~~d~~~~~~~-g~~~~~~~~~~~~~~~ 307 (719)
T 1z68_A 230 DTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVT-DERVCLQWLKRVQNVSVLSICDFREDWQT-WDCPKTQEHIEESRTG 307 (719)
T ss_dssp ESSCHHHHCCEECCCCHHHHTSCEEEEEEEESS-SSEEEEEEEESSTTEEEEEEEEECSSSSS-EECCGGGEEEEECSSS
T ss_pred ECCCCCccceeEccCCccCCCCcceEEEeEEeC-CCeEEEEEeccccCeEEEEEEcccCCCCC-CceEEEEecccccCCc
Confidence 99877532 11100 113556789999999 777766644322 1388899 665 3333333 35666
Q ss_pred eee-----EEEeCCCCCCeEE-EEcCCCc--EEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEcC--
Q 038533 260 CVN-----AIAWAPQSRRHIC-SVGDDSQ--AFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFS-- 329 (337)
Q Consensus 260 ~v~-----~~~~~~~~~~~l~-~~~~dg~--i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-- 329 (337)
.+. .+.|+|+|+.+++ +...+|. |.+|++. . .....+..+...+..+.++ +++.++..+.+
T Consensus 308 ~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~--~------~~~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~ 378 (719)
T 1z68_A 308 WAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDT--V------ENAIQITSGKWEAINIFRV-TQDSLFYSSNEFE 378 (719)
T ss_dssp CSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSC--S------TTCEECSCSSSCEEEEEEE-CSSEEEEEESCGG
T ss_pred eEccccCCccEECCCCCeEEEEEEccCCceEEEEEECC--C------CceEecccCceEEEEEEEE-eCCEEEEEEecCC
Confidence 666 8899999984433 3445664 5555655 2 1133444455567787777 88778777754
Q ss_pred ---CcEEEEeC
Q 038533 330 ---NKMQLLKV 337 (337)
Q Consensus 330 ---~~i~iw~l 337 (337)
+..++|.+
T Consensus 379 ~~~~~~~l~~~ 389 (719)
T 1z68_A 379 EYPGRRNIYRI 389 (719)
T ss_dssp GCTTCBEEEEE
T ss_pred CCCceEEEEEE
Confidence 78888864
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.86 E-value=1.6e-18 Score=146.98 Aligned_cols=276 Identities=10% Similarity=0.053 Sum_probs=172.7
Q ss_pred CCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEe
Q 038533 20 SPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASS 97 (337)
Q Consensus 20 ~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~ 97 (337)
+...+..++|+ +++|++++...+.++.|.+|+++..++.+...... ..+......+++ +++ +|+++
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~-~~~~~~p~~~~~--dg~---------~l~~~ 115 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQ-KTMGADPCYLTT--NGK---------NIVTA 115 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEE-ECSSSCEEEEEE--CSS---------EEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEe-ccCCCCcEEEEE--CCC---------EEEEE
Confidence 45667789999 88888888521123899999999865544321111 224456677777 666 54444
Q ss_pred -C-C-eEEEEecCCCC-ccceeeecCCCC------CcccCCeeEEEeecCCCCeEEEee-CCCcEEEEeCCCccc-----
Q 038533 98 -G-D-FLRLWDVGDSS-IEPVAVLNNSKS------SEFCAPLTSFDWNEIEPKRIGTCS-IDTTCTIWDIEKGVV----- 161 (337)
Q Consensus 98 -~-~-~v~vw~~~~~~-~~~~~~~~~~~~------~~~~~~i~~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~~----- 161 (337)
. + .|.+|++.... .........+.. ......+.+++|+| +++++++++ .++.|.+|++.....
T Consensus 116 ~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~ 194 (361)
T 3scy_A 116 NYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITP-DGKYLLADDLGTDQIHKFNINPNANADNKE 194 (361)
T ss_dssp ETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTCCTTTCC
T ss_pred ECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECC-CCCEEEEEeCCCCEEEEEEEcCCCCccccc
Confidence 3 4 99999997542 111111111110 01113468899999 888665554 588999998875431
Q ss_pred -h-------hhhhccCCceeEEEeC-CCcEEEEEc-CCCeEEEEECCCCCCc--eeeecCCCCCCCceEEEeecCCCcEE
Q 038533 162 -E-------TQLIAHDKEVYDICWG-EARVFASVS-ADGSVRIFDLRDKEHS--TIIYESPQPDTPLLRLAWNKQDLRYM 229 (337)
Q Consensus 162 -~-------~~~~~~~~~v~~~~~~-~~~~l~~~~-~dg~i~iwd~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~l 229 (337)
+ .....+...+..++|+ +++++++++ .++.|.+||+.+++.. ........+......++|+| ++++|
T Consensus 195 ~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~sp-dg~~l 273 (361)
T 3scy_A 195 KFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSP-DGKYL 273 (361)
T ss_dssp CCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECT-TSSEE
T ss_pred ceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECC-CCCEE
Confidence 1 1112234567899999 787776666 6899999999865431 11222222334568999999 99998
Q ss_pred EEEEec-CCEEEEEECCCC-CC--CeEEeecccceeeEEEeCCCCCCeEEEEc-CCCcEEEEeCCCCCCCCCCCCCceee
Q 038533 230 ATILMD-SNKVVILDIRSP-TL--PVAELERHRACVNAIAWAPQSRRHICSVG-DDSQAFIWELPLPPVAGPNGIDPMSM 304 (337)
Q Consensus 230 ~~~~~d-~~~i~i~d~~~~-~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~ 304 (337)
+++..+ ...|.+|++... +. .+..+.. ...+..++|+|+|+ +|++++ .++.|.+|+++..+. . ....
T Consensus 274 ~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~-~l~~~~~~~~~v~v~~~d~~~g-----~-~~~~ 345 (361)
T 3scy_A 274 YASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGK-YLLVACRDTNVIQIFERDQATG-----L-LTDI 345 (361)
T ss_dssp EEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSC-EEEEEETTTTEEEEEEECTTTC-----C-EEEC
T ss_pred EEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCC-EEEEEECCCCCEEEEEEECCCC-----c-Eeec
Confidence 887766 334999999632 22 2333333 45688999999999 666665 678999987762221 1 1111
Q ss_pred --eeCCCceeEEEEc
Q 038533 305 --YSAGSEINQLQWS 317 (337)
Q Consensus 305 --~~~~~~v~~~~~~ 317 (337)
..+...+.+++|.
T Consensus 346 ~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 346 KKDIKVDKPVCLKFV 360 (361)
T ss_dssp SCCEECSSEEEEEEE
T ss_pred ceeeeCCCCeEEEEc
Confidence 1234568888886
No 159
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.86 E-value=1.8e-19 Score=150.96 Aligned_cols=239 Identities=9% Similarity=0.026 Sum_probs=166.7
Q ss_pred ceeeeeCCC---ceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCC----CCCCeEEEecCCCCc
Q 038533 14 NSVTHESPY---PLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDH----PYPPTKLMFDPNSSS 84 (337)
Q Consensus 14 ~~~~~~~~~---~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~----~~~i~~i~~~~~~~~ 84 (337)
.+..+.... .+..++|+ +++++++.. .++.|.+|+.......... ...+ ...+..++|+|+++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~---~~~~v~~~d~~~~~~~~~~----~~~~~~~~~~~~~~~~~s~dg~- 94 (337)
T 1pby_B 23 VDKVITIADAGPTPMVPMVAPGGRIAYATVN---KSESLVKIDLVTGETLGRI----DLSTPEERVKSLFGAALSPDGK- 94 (337)
T ss_dssp EEEEEECTTCTTCCCCEEECTTSSEEEEEET---TTTEEEEEETTTCCEEEEE----ECCBTTEEEECTTCEEECTTSS-
T ss_pred EEEEEEcCCCCCCccceEEcCCCCEEEEEeC---CCCeEEEEECCCCCeEeeE----EcCCcccccccccceEECCCCC-
Confidence 444555554 68899999 656655442 3789999987654432222 1222 23688999999998
Q ss_pred ccCcCCccEEEEe-------------CC-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCc
Q 038533 85 RKSSSNRHLLASS-------------GD-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTT 150 (337)
Q Consensus 85 ~~~~~~~~~l~~~-------------~~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~ 150 (337)
.|+++ .+ .|.+||+.++ +....+... ..+.+++|+| ++++++++ ++.
T Consensus 95 --------~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~--~~~~~~~~~------~~~~~~~~s~-dg~~l~~~--~~~ 155 (337)
T 1pby_B 95 --------TLAIYESPVRLELTHFEVQPTRVALYDAETL--SRRKAFEAP------RQITMLAWAR-DGSKLYGL--GRD 155 (337)
T ss_dssp --------EEEEEEEEEEECSSCEEECCCEEEEEETTTT--EEEEEEECC------SSCCCEEECT-TSSCEEEE--SSS
T ss_pred --------EEEEEecccccccccccccCceEEEEECCCC--cEEEEEeCC------CCcceeEECC-CCCEEEEe--CCe
Confidence 66665 34 9999999887 455555442 4577899999 88888887 689
Q ss_pred EEEEeCCCccchhhhhccCCceeEEEeC-CCcEEEEEcC-CC-----------------------eEEEEECCCCCCcee
Q 038533 151 CTIWDIEKGVVETQLIAHDKEVYDICWG-EARVFASVSA-DG-----------------------SVRIFDLRDKEHSTI 205 (337)
Q Consensus 151 i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~-dg-----------------------~i~iwd~~~~~~~~~ 205 (337)
|.+||+.+++.+..+..+.. ...+.|+ ++..++..+. ++ .|.+||+.+++....
T Consensus 156 i~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~ 234 (337)
T 1pby_B 156 LHVMDPEAGTLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMR 234 (337)
T ss_dssp EEEEETTTTEEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEE
T ss_pred EEEEECCCCcEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEe
Confidence 99999998887655543321 1123666 4554443332 22 478999998875422
Q ss_pred eecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEE
Q 038533 206 IYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFI 285 (337)
Q Consensus 206 ~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 285 (337)
... .+...+.+++|+| ++++++++ ++. |++||+.+ .+.+..+.. ...+.+++|+|+++ +|++++.++.|.+
T Consensus 235 ~~~--~~~~~~~~~~~s~-dg~~l~~~--~~~-v~~~d~~~-~~~~~~~~~-~~~~~~~~~s~dg~-~l~~~~~~~~i~v 305 (337)
T 1pby_B 235 EVR--IMDVFYFSTAVNP-AKTRAFGA--YNV-LESFDLEK-NASIKRVPL-PHSYYSVNVSTDGS-TVWLGGALGDLAA 305 (337)
T ss_dssp EEE--ECSSCEEEEEECT-TSSEEEEE--ESE-EEEEETTT-TEEEEEEEC-SSCCCEEEECTTSC-EEEEESBSSEEEE
T ss_pred ecC--CCCCceeeEEECC-CCCEEEEe--CCe-EEEEECCC-CcCcceecC-CCceeeEEECCCCC-EEEEEcCCCcEEE
Confidence 121 2446788999999 99988887 566 99999987 445555553 35678999999999 8888888999999
Q ss_pred EeCC
Q 038533 286 WELP 289 (337)
Q Consensus 286 w~~~ 289 (337)
||+.
T Consensus 306 ~d~~ 309 (337)
T 1pby_B 306 YDAE 309 (337)
T ss_dssp EETT
T ss_pred EECc
Confidence 9998
No 160
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.84 E-value=9e-19 Score=149.92 Aligned_cols=275 Identities=8% Similarity=0.026 Sum_probs=174.5
Q ss_pred EEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEE
Q 038533 27 MAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLR 102 (337)
Q Consensus 27 ~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~ 102 (337)
.+|+ |++||+++. .++...||.++..+..... +...+...+..+.|+|+++ .|+.++ + .|.
T Consensus 41 ~~~SpDg~~l~~~~~---~~g~~~l~~~d~~~g~~~~---lt~~~~~~~~~~~~spdg~---------~l~~~~~~~~l~ 105 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGA---FDGPWNYYLLDLNTQVATQ---LTEGRGDNTFGGFLSPDDD---------ALFYVKDGRNLM 105 (388)
T ss_dssp CCBCTTSCEEEEEEC---TTSSCEEEEEETTTCEEEE---CCCSSCBCSSSCEECTTSS---------EEEEEETTTEEE
T ss_pred ccCCCCCCEEEEEEc---CCCCceEEEEeCCCCceEE---eeeCCCCCccceEEcCCCC---------EEEEEeCCCeEE
Confidence 7899 888988874 2565455555555544443 1245555666788999999 777665 5 999
Q ss_pred EEecCCCCccceeeecCCCCCcccCCeeEEE--eecCCCCeEEEe----------------------eCCCcEEEEeCCC
Q 038533 103 LWDVGDSSIEPVAVLNNSKSSEFCAPLTSFD--WNEIEPKRIGTC----------------------SIDTTCTIWDIEK 158 (337)
Q Consensus 103 vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~l~~~----------------------~~dg~i~v~d~~~ 158 (337)
+||+.+++. ...+..+. ..+.... ++| ++..++.. ..+..|.+||+.+
T Consensus 106 ~~d~~~g~~--~~~~~~~~-----~~~~~~~~~~~~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~ 177 (388)
T 3pe7_A 106 RVDLATLEE--NVVYQVPA-----EWVGYGTWVANS-DCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKT 177 (388)
T ss_dssp EEETTTCCE--EEEEECCT-----TEEEEEEEEECT-TSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTT
T ss_pred EEECCCCcc--eeeeechh-----hcccccceeECC-CCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCC
Confidence 999999853 33344333 3343333 477 88877742 2457899999998
Q ss_pred ccchhhhhccCCceeEEEeCC--CcEEEEEcCC------CeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEE
Q 038533 159 GVVETQLIAHDKEVYDICWGE--ARVFASVSAD------GSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMA 230 (337)
Q Consensus 159 ~~~~~~~~~~~~~v~~~~~~~--~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 230 (337)
++.. .+..+...+..++|+| ++.|+.+..+ ..|.++|....... .+... .....+..+.|+| +++.|+
T Consensus 178 g~~~-~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~-~~~~~~~~~~~sp-dg~~l~ 253 (388)
T 3pe7_A 178 GEST-VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR-KVKTH-AEGESCTHEFWVP-DGSALV 253 (388)
T ss_dssp CCEE-EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE-ESCCC-CTTEEEEEEEECT-TSSCEE
T ss_pred CceE-EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE-EeeeC-CCCcccccceECC-CCCEEE
Confidence 8643 4445667789999996 6677776653 37888888765532 22221 1113577889999 888776
Q ss_pred EEEec-CC---EEEEEECCCCCC-CeEEeecccce---eeEEEeCCCCCCeEEEE--------cCCCcEEEEeCCCCCCC
Q 038533 231 TILMD-SN---KVVILDIRSPTL-PVAELERHRAC---VNAIAWAPQSRRHICSV--------GDDSQAFIWELPLPPVA 294 (337)
Q Consensus 231 ~~~~d-~~---~i~i~d~~~~~~-~~~~~~~~~~~---v~~~~~~~~~~~~l~~~--------~~dg~i~iw~~~~~~~~ 294 (337)
..+.+ +. .|++||+.+... .+..+..+... ...+.|+|+|+.++++. ..+..|.+||+..+
T Consensus 254 ~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~--- 330 (388)
T 3pe7_A 254 YVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNG--- 330 (388)
T ss_dssp EEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTT---
T ss_pred EEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCC---
Confidence 65543 32 299999987331 22222221111 22347999999433332 45678999999822
Q ss_pred CCCCCCceeeeeCCC-----------ceeEEEEccCCCceEEEE-cCCcEEEEe
Q 038533 295 GPNGIDPMSMYSAGS-----------EINQLQWSPAQPDWLAIA-FSNKMQLLK 336 (337)
Q Consensus 295 ~~~~~~~~~~~~~~~-----------~v~~~~~~~~~~~l~~~~-~d~~i~iw~ 336 (337)
....+..+.. .+.+++|+|||+.|+.++ .++...||.
T Consensus 331 -----~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~ 379 (388)
T 3pe7_A 331 -----TQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYL 379 (388)
T ss_dssp -----EEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEE
T ss_pred -----ceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEE
Confidence 1334455554 578899999998888666 578788875
No 161
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.84 E-value=1.1e-18 Score=161.30 Aligned_cols=288 Identities=11% Similarity=0.034 Sum_probs=182.8
Q ss_pred ceeEEEEe--cceEEEeeeec-----cCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEE
Q 038533 23 PLYAMAVC--GQRIAVGSFIE-----DYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLA 95 (337)
Q Consensus 23 ~v~~~~~s--~~~la~g~~~~-----~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~ 95 (337)
.+.+++|| |++||+++... ..++.|++|+++........ .....+..++|+||++ .||
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~------~l~~~~~~~~~SPDG~---------~la 125 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGN------ELPRPIQYLCWSPVGS---------KLA 125 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSS------CCCSSBCCEEECSSTT---------CEE
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccce------ecCcccccceECCCCC---------EEE
Confidence 38899999 89999887411 12588999887654321001 1125688999999999 888
Q ss_pred EeCC-eEEEEecCCCCccceeee-cCCCCC---cc---------cCCeeEEEeecCCCCeEEEeeCCC------------
Q 038533 96 SSGD-FLRLWDVGDSSIEPVAVL-NNSKSS---EF---------CAPLTSFDWNEIEPKRIGTCSIDT------------ 149 (337)
Q Consensus 96 ~~~~-~v~vw~~~~~~~~~~~~~-~~~~~~---~~---------~~~i~~~~~~~~~~~~l~~~~~dg------------ 149 (337)
.+.+ .|++|++.+++. .... .++... ++ .....+++|+| +++.|++++.|.
T Consensus 126 ~~~~~~i~~~~~~~g~~--~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP-DG~~la~~~~d~~~~~~~~~~~~~ 202 (719)
T 1z68_A 126 YVYQNNIYLKQRPGDPP--FQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP-NGKFLAYAEFNDTDIPVIAYSYYG 202 (719)
T ss_dssp EEETTEEEEESSTTSCC--EECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT-TSSEEEEEEEECTTSCEEEEEECC
T ss_pred EEECCeEEEEeCCCCCc--EEEecCCCcCCeEcccccceeeeecccCcccEEECC-CCCEEEEEEECCCCCceEEeeccC
Confidence 8877 999999988742 2221 222100 00 01125899999 999999987652
Q ss_pred ----------------------cEEEEeCCCccch--------hhhhccCCceeEEEeC-CCcEEEEEcCC----CeEEE
Q 038533 150 ----------------------TCTIWDIEKGVVE--------TQLIAHDKEVYDICWG-EARVFASVSAD----GSVRI 194 (337)
Q Consensus 150 ----------------------~i~v~d~~~~~~~--------~~~~~~~~~v~~~~~~-~~~~l~~~~~d----g~i~i 194 (337)
.|++||+.+++.. ..+.+|...+..++|+ +++++++.... ..|.+
T Consensus 203 ~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~ 282 (719)
T 1z68_A 203 DEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSI 282 (719)
T ss_dssp SSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEE
T ss_pred CCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEE
Confidence 7899999887753 3455688889999999 66665553322 34888
Q ss_pred EE----CCCCCCceeee-cCCCCCCCce-----EEEeecCCCcEEEE--EEecCC-EEEEEECCCCCCCeEEeeccccee
Q 038533 195 FD----LRDKEHSTIIY-ESPQPDTPLL-----RLAWNKQDLRYMAT--ILMDSN-KVVILDIRSPTLPVAELERHRACV 261 (337)
Q Consensus 195 wd----~~~~~~~~~~~-~~~~~~~~i~-----~~~~~~~~~~~l~~--~~~d~~-~i~i~d~~~~~~~~~~~~~~~~~v 261 (337)
|| +.+++...... ....+...+. .+.|+| +++.++. ...++. .|.+||+.. +. ...+..+...+
T Consensus 283 ~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~g~~~l~~~~~~~-~~-~~~lt~~~~~v 359 (719)
T 1z68_A 283 CDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSY-DAISYYKIFSDKDGYKHIHYIKDTV-EN-AIQITSGKWEA 359 (719)
T ss_dssp EEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECT-TSSCEEEEEECTTSCEEEEEESSCS-TT-CEECSCSSSCE
T ss_pred EcccCCCCCCceEEEEecccccCCceEccccCCccEECC-CCCeEEEEEEccCCceEEEEEECCC-Cc-eEecccCceEE
Confidence 99 77665433331 0012345555 789999 8886554 323332 377778765 33 45565556667
Q ss_pred eEEEeCCCCCCeEEEEcC----CCcEEEEeCCCCCCCCCCCCCceeee----eCCCceeEEEEccCCCceEEEE-cC--C
Q 038533 262 NAIAWAPQSRRHICSVGD----DSQAFIWELPLPPVAGPNGIDPMSMY----SAGSEINQLQWSPAQPDWLAIA-FS--N 330 (337)
Q Consensus 262 ~~~~~~~~~~~~l~~~~~----dg~i~iw~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~-~d--~ 330 (337)
..+.+. +++.+++++.. ++..++|.+...... .....+. +|...+..+.|+|+++.++..+ .. .
T Consensus 360 ~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~----~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p 434 (719)
T 1z68_A 360 INIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYP----PSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIP 434 (719)
T ss_dssp EEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSS----CCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSC
T ss_pred EEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCC----CCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCC
Confidence 777777 77735555554 588999988731110 0011111 2556788999999998877543 22 3
Q ss_pred cEEEEe
Q 038533 331 KMQLLK 336 (337)
Q Consensus 331 ~i~iw~ 336 (337)
.+.+|+
T Consensus 435 ~~~l~d 440 (719)
T 1z68_A 435 ISTLHD 440 (719)
T ss_dssp EEEEEC
T ss_pred eEEEEE
Confidence 456665
No 162
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.84 E-value=1.6e-18 Score=160.62 Aligned_cols=245 Identities=12% Similarity=0.114 Sum_probs=169.4
Q ss_pred CCCCeEEEecCCCCcccCcCCccEEEEeCC-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCC
Q 038533 70 PYPPTKLMFDPNSSSRKSSSNRHLLASSGD-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSID 148 (337)
Q Consensus 70 ~~~i~~i~~~~~~~~~~~~~~~~~l~~~~~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d 148 (337)
......+.|+|++. +++++ + .|++||+.++ +....+.+|....+......++||| ++++|+.++.+
T Consensus 16 ~~~~~~~~w~~dg~---------~~~~~-~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Sp-dg~~l~~~~~~ 82 (740)
T 4a5s_A 16 RLKLYSLRWISDHE---------YLYKQ-ENNILVFNAEYG--NSSVFLENSTFDEFGHSINDYSISP-DGQFILLEYNY 82 (740)
T ss_dssp CCCCCCEEECSSSE---------EEEEE-TTEEEEEETTTC--CEEEEECTTTTTTCCSCCCEEEECT-TSSEEEEEEEE
T ss_pred cccccccEECCCCc---------EEEEc-CCcEEEEECCCC--ceEEEEechhhhhhcccccceEECC-CCCEEEEEECC
Confidence 34467899999998 99988 6 9999999999 4556677766333333445689999 99999998876
Q ss_pred ---------CcEEEEeCCCccchhhhhccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCC----
Q 038533 149 ---------TTCTIWDIEKGVVETQLIAHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDT---- 214 (337)
Q Consensus 149 ---------g~i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~---- 214 (337)
+.+.+||+.+++.. .+..+...+...+|+ +++.|+.+. ++.|++||+.+++........ +..
T Consensus 83 ~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g--~~~~~~~ 158 (740)
T 4a5s_A 83 VKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTG--KEDIIYN 158 (740)
T ss_dssp EECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCC--BTTTEEE
T ss_pred eeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCC--Cccceec
Confidence 56779999998754 456677889999999 788998885 689999999887744332211 111
Q ss_pred -------------CceEEEeecCCCcEEEEEEecCC-----------------------------------EEEEEECCC
Q 038533 215 -------------PLLRLAWNKQDLRYMATILMDSN-----------------------------------KVVILDIRS 246 (337)
Q Consensus 215 -------------~i~~~~~~~~~~~~l~~~~~d~~-----------------------------------~i~i~d~~~ 246 (337)
....+.|+| +++.|+..+.|.. .|++||+.+
T Consensus 159 g~~~~v~~ee~~~~~~~~~wSp-Dg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~ 237 (740)
T 4a5s_A 159 GITDWVYEEEVFSAYSALWWSP-NGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDS 237 (740)
T ss_dssp SBCCHHHHHHTSSSSBCEEECT-TSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTS
T ss_pred CcccccccchhcCCCcceEECC-CCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCC
Confidence 223589999 9999998865432 478888876
Q ss_pred ---CCC-CeEEee------cccceeeEEEeCCCCCCeEEEEc----CCCcEEEEeCCCCC----CCCCCCCCceeeeeCC
Q 038533 247 ---PTL-PVAELE------RHRACVNAIAWAPQSRRHICSVG----DDSQAFIWELPLPP----VAGPNGIDPMSMYSAG 308 (337)
Q Consensus 247 ---~~~-~~~~~~------~~~~~v~~~~~~~~~~~~l~~~~----~dg~i~iw~~~~~~----~~~~~~~~~~~~~~~~ 308 (337)
... ....+. +|...+..++|+|+|+ +++... .+..|.+||+..++ ... ........|.
T Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~-~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~---~~~l~~~~~~ 313 (740)
T 4a5s_A 238 LSSVTNATSIQITAPASMLIGDHYLCDVTWATQER-ISLQWLRRIQNYSVMDICDYDESSGRWNCLV---ARQHIEMSTT 313 (740)
T ss_dssp CCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTE-EEEEEEESSTTEEEEEEEEEETTTTEEEECG---GGCEEEECSS
T ss_pred CCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCe-EEEEEeCCCCCEEEEEEEECCCCccccceeE---EEEeeeccCC
Confidence 421 223333 2777899999999998 666543 23479999998322 000 0111223455
Q ss_pred Ccee-----EEEEccCCCceE-EEE-cCCc--EEEEe
Q 038533 309 SEIN-----QLQWSPAQPDWL-AIA-FSNK--MQLLK 336 (337)
Q Consensus 309 ~~v~-----~~~~~~~~~~l~-~~~-~d~~--i~iw~ 336 (337)
..|. ..+|+|||+.++ ..+ .+|. |.+|+
T Consensus 314 ~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~ 350 (740)
T 4a5s_A 314 GWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQ 350 (740)
T ss_dssp SCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEE
T ss_pred ceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEE
Confidence 5544 789999998877 555 4454 44544
No 163
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.82 E-value=7.7e-18 Score=154.25 Aligned_cols=284 Identities=10% Similarity=0.012 Sum_probs=178.2
Q ss_pred eCCCceeEEEEecceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCe---------EEEec--CCCCcccC
Q 038533 19 ESPYPLYAMAVCGQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPT---------KLMFD--PNSSSRKS 87 (337)
Q Consensus 19 ~~~~~v~~~~~s~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~---------~i~~~--~~~~~~~~ 87 (337)
.+...+..++|+++.++......++++...||........... ..+...+. ...|+ ||++
T Consensus 21 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~~~~~~~~SPDg~---- 91 (662)
T 3azo_A 21 SRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESA-----LPAPWNVRNRVFEYSGFPWAGVPRPAGG---- 91 (662)
T ss_dssp HTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEES-----SCTTCCBCCCGGGTCCCCEEEECCSSSS----
T ss_pred hcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCccee-----CCCCccccccccccCCccceeeeecCCC----
Confidence 3567899999995455444432234788999987443322222 44555555 56665 9998
Q ss_pred cCCccE-EEEeCC---eEEEEecC--C-CCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCC----------Cc
Q 038533 88 SSNRHL-LASSGD---FLRLWDVG--D-SSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSID----------TT 150 (337)
Q Consensus 88 ~~~~~~-l~~~~~---~v~vw~~~--~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d----------g~ 150 (337)
. |+.+++ .|.++++. + ++ ...+.......+...+..++|+| +++.|+.++.+ ..
T Consensus 92 -----~~la~~~~~~~~l~~~~~~~~g~~~---~~~l~~~~~~~~~~~~~~~~~sp-Dg~~l~~~~~~~~~~~~~~~~~~ 162 (662)
T 3azo_A 92 -----PLLVFTHFGDQRLYAFEPDAPGGAV---PRPLTPVSAVGGGLRWADPVLLP-ERGEVWCMAEEFTGEGPSDVRRF 162 (662)
T ss_dssp -----CEEEEEBTTTCCEEEECTTSTTCCC---CEECSCCCCSTTCEEEEEEEEET-TTTEEEEEEEEECSSSTTCEEEE
T ss_pred -----eEEEEEECCCCeEEEEcCCCCCCCC---CEeccCCccCCCCccccCcEECC-CCCEEEEEEecccCCCCCCceeE
Confidence 6 666653 67777765 3 42 22333310000116788999999 99999998877 58
Q ss_pred EEEEeCCC------ccchhhhh-ccCCceeEEEeC-CCcEEEEEcCC--------CeEEEEECC-CCC--CceeeecCCC
Q 038533 151 CTIWDIEK------GVVETQLI-AHDKEVYDICWG-EARVFASVSAD--------GSVRIFDLR-DKE--HSTIIYESPQ 211 (337)
Q Consensus 151 i~v~d~~~------~~~~~~~~-~~~~~v~~~~~~-~~~~l~~~~~d--------g~i~iwd~~-~~~--~~~~~~~~~~ 211 (337)
|++||+.+ ++. ..+. .+...+..++|+ ++++|+.++.+ ..|.+||+. ++. ....+...
T Consensus 163 i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~-- 239 (662)
T 3azo_A 163 LAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG-- 239 (662)
T ss_dssp EEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE--
T ss_pred EEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC--
Confidence 99999987 543 3444 556778889999 78889877754 479999998 452 22222222
Q ss_pred CCCCceEEEeecCCCcEEEEEEecCC-EEEEEECCCCCCCeEEeecccce---------eeEEEeCCCCCCeEEEEcCCC
Q 038533 212 PDTPLLRLAWNKQDLRYMATILMDSN-KVVILDIRSPTLPVAELERHRAC---------VNAIAWAPQSRRHICSVGDDS 281 (337)
Q Consensus 212 ~~~~i~~~~~~~~~~~~l~~~~~d~~-~i~i~d~~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~~l~~~~~dg 281 (337)
+...+..+.|+| ++++++++..++. .|++||+.+ ++ ...+..+... +..++|+|++. ++++++. +
T Consensus 240 ~~~~~~~~~~sp-dg~l~~~~~~~~~~~l~~~~~~~-~~-~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~-~~~~~~~-~ 314 (662)
T 3azo_A 240 PEEAIAQAEWAP-DGSLIVATDRTGWWNLHRVDPAT-GA-ATQLCRREEEFAGPLWTPGMRWFAPLANGL-IAVVHGK-G 314 (662)
T ss_dssp TTBCEEEEEECT-TSCEEEEECTTSSCEEEEECTTT-CC-EEESSCCSSBSSCCCCSTTCCSEEECTTSC-EEEEEBS-S
T ss_pred CCceEcceEECC-CCeEEEEECCCCCeEEEEEECCC-Cc-eeecccccccccCccccccCceEeEeCCCE-EEEEEEc-C
Confidence 346789999999 8887777666663 266677654 33 2333222221 46789999998 9999998 9
Q ss_pred cEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceE--EEEcCCcEEEE
Q 038533 282 QAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWL--AIAFSNKMQLL 335 (337)
Q Consensus 282 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~--~~~~d~~i~iw 335 (337)
.++||.++... .....+..+...+..+ |++++..++ +.+.+....||
T Consensus 315 ~~~l~~~d~~~------~~~~~l~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~i~ 363 (662)
T 3azo_A 315 AAVLGILDPES------GELVDAAGPWTEWAAT-LTVSGTRAVGVAASPRTAYEVV 363 (662)
T ss_dssp SCEEEEEETTT------TEEEECCSSCCEEEEE-EEEETTEEEEEEEETTEEEEEE
T ss_pred ccEEEEEECCC------CcEEEecCCCCeEEEE-EecCCCEEEEEEcCCCCCCEEE
Confidence 99999554112 1133445566667766 144444333 33445444555
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.80 E-value=1.2e-17 Score=141.89 Aligned_cols=244 Identities=10% Similarity=0.049 Sum_probs=160.0
Q ss_pred CceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCcc-EEEEe-
Q 038533 22 YPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRH-LLASS- 97 (337)
Q Consensus 22 ~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~-~l~~~- 97 (337)
..+..++|+ +++|++++. + .|.+|+++... .... .......+.+.+++|+|+++ . +++++
T Consensus 40 ~~~~~~a~spdg~~l~~~~~----~-~v~~~~~~~~g-~~~~--~~~~~~~g~~~~~~~spdg~--------~l~~~~~~ 103 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAM----K-KWSSFAVKSPT-EIVH--EASHPIGGHPRANDADTNTR--------AIFLLAAK 103 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEB----T-EEEEEEEEETT-EEEE--EEEEECCSSGGGGCTTSCCE--------EEEEEECS
T ss_pred CCCcEEEECCCCCEEEEEcc----c-eEEEEEECCCC-CEEE--eeEeecCCCCccEEECCCCC--------EEEEEEec
Confidence 467889999 888888884 5 99999987322 2221 00011112366799999997 3 23343
Q ss_pred -------------CC-eEEEEecCC-CCccc-eeeec-CCCCCcccCCeeEEEeecCCCCeEEEeeC-CCcEEEEeCC-C
Q 038533 98 -------------GD-FLRLWDVGD-SSIEP-VAVLN-NSKSSEFCAPLTSFDWNEIEPKRIGTCSI-DTTCTIWDIE-K 158 (337)
Q Consensus 98 -------------~~-~v~vw~~~~-~~~~~-~~~~~-~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-dg~i~v~d~~-~ 158 (337)
.+ .+.+|++.. ++... +..+. .+. ..+.+++|+| ++++++++.. ++.|++||+. +
T Consensus 104 ~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~-----~~~~~~~~sp-dG~~l~~~~~~~~~v~~~~~~~~ 177 (365)
T 1jof_A 104 QPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQEN-----TGIHGMVFDP-TETYLYSADLTANKLWTHRKLAS 177 (365)
T ss_dssp STTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTT-----CCEEEEEECT-TSSEEEEEETTTTEEEEEEECTT
T ss_pred CCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCC-----CcceEEEECC-CCCEEEEEcCCCCEEEEEEECCC
Confidence 34 899999974 43211 11111 122 5789999999 9988877654 6799999998 6
Q ss_pred ccch--hhhh--ccCCceeEEEeC-CCcEEEEEcC-CCeEEEEECC--CCCCce---eeecCCC----CCC------Cce
Q 038533 159 GVVE--TQLI--AHDKEVYDICWG-EARVFASVSA-DGSVRIFDLR--DKEHST---IIYESPQ----PDT------PLL 217 (337)
Q Consensus 159 ~~~~--~~~~--~~~~~v~~~~~~-~~~~l~~~~~-dg~i~iwd~~--~~~~~~---~~~~~~~----~~~------~i~ 217 (337)
++.. ..+. .|...+..++|+ +++++++++. ++.|.+|++. +++... .+...+. +.. .+.
T Consensus 178 g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 257 (365)
T 1jof_A 178 GEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRA 257 (365)
T ss_dssp SCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEE
T ss_pred CCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccc
Confidence 6532 2222 235668999999 7878877664 7899999876 343211 1221211 111 478
Q ss_pred EEE-eecCCCcEEEEEEecCC-----EEEEEECCCCCCCeE---EeecccceeeEEEeCC---CCCCeEEEEcC-CCcEE
Q 038533 218 RLA-WNKQDLRYMATILMDSN-----KVVILDIRSPTLPVA---ELERHRACVNAIAWAP---QSRRHICSVGD-DSQAF 284 (337)
Q Consensus 218 ~~~-~~~~~~~~l~~~~~d~~-----~i~i~d~~~~~~~~~---~~~~~~~~v~~~~~~~---~~~~~l~~~~~-dg~i~ 284 (337)
.++ |+| ++++|++++.+.. .|.+|++...++... ....+...+..++|+| +|+ +|++++. ++.|.
T Consensus 258 ~i~~~sp-dG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~-~l~v~~~~~~~v~ 335 (365)
T 1jof_A 258 DVCALTF-SGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDE-WMAITDDQEGWLE 335 (365)
T ss_dssp EEEEECT-TSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTT-EEEEECSSSCEEE
T ss_pred cEEEECC-CCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCC-EEEEEEcCCCeEE
Confidence 899 999 9998887765442 499999964244322 1333445678899999 798 8888876 48999
Q ss_pred EEeCC
Q 038533 285 IWELP 289 (337)
Q Consensus 285 iw~~~ 289 (337)
+|+++
T Consensus 336 v~~~~ 340 (365)
T 1jof_A 336 IYRWK 340 (365)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 99998
No 165
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.80 E-value=2e-16 Score=129.63 Aligned_cols=241 Identities=7% Similarity=-0.008 Sum_probs=165.1
Q ss_pred CCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCC-CCcccCCeeEEEeecCCCCeEEE
Q 038533 68 DHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSK-SSEFCAPLTSFDWNEIEPKRIGT 144 (337)
Q Consensus 68 ~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~l~~ 144 (337)
++-..+.++++++++. ++++.. + .|.+||.... ....+.... ...+...+.++++.+.++.++++
T Consensus 27 g~~~~p~~v~~~~~g~---------l~v~~~~~~~i~~~d~~g~---~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~ 94 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQND---------IIVADTNNHRIQIFDKEGR---FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVT 94 (286)
T ss_dssp TCBSCEEEEEECTTCC---------EEEEEGGGTEEEEECTTSC---EEEEECCBSSSTTCBSSEEEEEEETTTTEEEEE
T ss_pred CccCCCceEEECCCCC---------EEEEECCCCEEEEECCCCc---EEEEecccCCCcccccCceEEEEEcCCCeEEEE
Confidence 4456689999999998 888765 4 9999998743 333332210 01112568899995326666666
Q ss_pred eeC-CCcEEEEeCCCccchhhhh-ccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEe
Q 038533 145 CSI-DTTCTIWDIEKGVVETQLI-AHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAW 221 (337)
Q Consensus 145 ~~~-dg~i~v~d~~~~~~~~~~~-~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~ 221 (337)
... ++.|.+|| .+++.+..+. .+...+.+++++ +++++++...++.|.+||... +....+. ...+...+..+++
T Consensus 95 ~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~~~~~~-~~~~~~~p~~i~~ 171 (286)
T 1q7f_A 95 ERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG-NVLHKFG-CSKHLEFPNGVVV 171 (286)
T ss_dssp ECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS-CEEEEEE-CTTTCSSEEEEEE
T ss_pred cCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC-CEEEEeC-CCCccCCcEEEEE
Confidence 643 78999999 4566555443 234568899999 678788878889999999653 3222222 1123356889999
Q ss_pred ecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeecc--cceeeEEEeCCCCCCeEEEEcCCC-cEEEEeCCCCCCCCCCC
Q 038533 222 NKQDLRYMATILMDSNKVVILDIRSPTLPVAELERH--RACVNAIAWAPQSRRHICSVGDDS-QAFIWELPLPPVAGPNG 298 (337)
Q Consensus 222 ~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~~~~~dg-~i~iw~~~~~~~~~~~~ 298 (337)
+| +++++++...++. |++||.. +..+..+..+ ...+..++++|+|. ++++...++ .|.+|+.. .
T Consensus 172 ~~-~g~l~v~~~~~~~-i~~~~~~--g~~~~~~~~~g~~~~p~~i~~d~~G~-l~v~~~~~~~~i~~~~~~--g------ 238 (286)
T 1q7f_A 172 ND-KQEIFISDNRAHC-VKVFNYE--GQYLRQIGGEGITNYPIGVGINSNGE-ILIADNHNNFNLTIFTQD--G------ 238 (286)
T ss_dssp CS-SSEEEEEEGGGTE-EEEEETT--CCEEEEESCTTTSCSEEEEEECTTCC-EEEEECSSSCEEEEECTT--S------
T ss_pred CC-CCCEEEEECCCCE-EEEEcCC--CCEEEEEccCCccCCCcEEEECCCCC-EEEEeCCCCEEEEEECCC--C------
Confidence 99 8887666666676 9999975 3445555433 35688999999998 888887776 99999965 1
Q ss_pred CCceeeeeC--CCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 299 IDPMSMYSA--GSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 299 ~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
.....+..+ ...+.+++++|+|+.+++ +.|+.|++|++
T Consensus 239 ~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~ 278 (286)
T 1q7f_A 239 QLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRY 278 (286)
T ss_dssp CEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEEC
T ss_pred CEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEc
Confidence 122233333 234789999999974444 78999999984
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.79 E-value=8.9e-17 Score=148.92 Aligned_cols=266 Identities=9% Similarity=0.086 Sum_probs=168.4
Q ss_pred CceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCC-----CCCeEEEecCCCCcccCcCCccEE
Q 038533 22 YPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHP-----YPPTKLMFDPNSSSRKSSSNRHLL 94 (337)
Q Consensus 22 ~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~-----~~i~~i~~~~~~~~~~~~~~~~~l 94 (337)
....+++|+ +++|++ + |+.|++|++......... ..|. .....+.||||++ .|
T Consensus 17 ~~~~~~~w~~dg~~~~~-~-----~~~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~Spdg~---------~l 76 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYK-Q-----ENNILVFNAEYGNSSVFL-----ENSTFDEFGHSINDYSISPDGQ---------FI 76 (740)
T ss_dssp CCCCCEEECSSSEEEEE-E-----TTEEEEEETTTCCEEEEE-----CTTTTTTCCSCCCEEEECTTSS---------EE
T ss_pred ccccccEECCCCcEEEE-c-----CCcEEEEECCCCceEEEE-----echhhhhhcccccceEECCCCC---------EE
Confidence 346789999 666665 3 789999998766543332 2232 2334589999999 77
Q ss_pred EEeCC-----------eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchh
Q 038533 95 ASSGD-----------FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVET 163 (337)
Q Consensus 95 ~~~~~-----------~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~ 163 (337)
+.+++ .+.+||+.+++. ..+..+. ..+...+||| +++.||.+. ++.|++||+.+++..+
T Consensus 77 ~~~~~~~~~~r~~~~~~~~~~d~~~~~~---~~l~~~~-----~~~~~~~~SP-dG~~la~~~-~~~i~~~~~~~~~~~~ 146 (740)
T 4a5s_A 77 LLEYNYVKQWRHSYTASYDIYDLNKRQL---ITEERIP-----NNTQWVTWSP-VGHKLAYVW-NNDIYVKIEPNLPSYR 146 (740)
T ss_dssp EEEEEEEECSSSCEEEEEEEEETTTTEE---CCSSCCC-----TTEEEEEECS-STTCEEEEE-TTEEEEESSTTSCCEE
T ss_pred EEEECCeeeEEEccceEEEEEECCCCcE---EEcccCC-----CcceeeEECC-CCCEEEEEE-CCeEEEEECCCCceEE
Confidence 76653 346999999842 2345555 6799999999 999999885 6899999998876433
Q ss_pred h-hhccCCce-----------------eEEEeC-CCcEEEEEcCCC----------------------------------
Q 038533 164 Q-LIAHDKEV-----------------YDICWG-EARVFASVSADG---------------------------------- 190 (337)
Q Consensus 164 ~-~~~~~~~v-----------------~~~~~~-~~~~l~~~~~dg---------------------------------- 190 (337)
. ..++...+ .++.|+ +++.|+.++.|.
T Consensus 147 lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~ 226 (740)
T 4a5s_A 147 ITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNP 226 (740)
T ss_dssp CCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCC
T ss_pred EcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCC
Confidence 2 22222222 358899 788888875321
Q ss_pred --eEEEEECCC---CCC--ceeeecCC---CCCCCceEEEeecCCCcEEEEEEecC---CEEEEEECCCCC-----CCeE
Q 038533 191 --SVRIFDLRD---KEH--STIIYESP---QPDTPLLRLAWNKQDLRYMATILMDS---NKVVILDIRSPT-----LPVA 252 (337)
Q Consensus 191 --~i~iwd~~~---~~~--~~~~~~~~---~~~~~i~~~~~~~~~~~~l~~~~~d~---~~i~i~d~~~~~-----~~~~ 252 (337)
.|++||+.+ ++. ...+.... .+...+..++|+| +++.++.....+ ..|.+||+.+.. ..+.
T Consensus 227 ~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wsp-dg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~ 305 (740)
T 4a5s_A 227 TVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT-QERISLQWLRRIQNYSVMDICDYDESSGRWNCLVAR 305 (740)
T ss_dssp EEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEE-TTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGG
T ss_pred eeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeC-CCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEE
Confidence 588899988 632 12221100 2456789999999 888766654433 149999998743 0122
Q ss_pred Ee--ecccceee-----EEEeCCCCCCeEE-EEc-CCC--cEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCC
Q 038533 253 EL--ERHRACVN-----AIAWAPQSRRHIC-SVG-DDS--QAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQP 321 (337)
Q Consensus 253 ~~--~~~~~~v~-----~~~~~~~~~~~l~-~~~-~dg--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 321 (337)
.+ ..|...+. .+.|+|+|+ .|+ ..+ .+| .|.+|+.. . .....+......+..+.+ ++++
T Consensus 306 ~l~~~~~~~~v~~~~~~~p~fspDG~-~l~~~~s~~~G~~~l~~~~~~--~------~~~~~lT~g~~~v~~~~~-~d~~ 375 (740)
T 4a5s_A 306 QHIEMSTTGWVGRFRPSEPHFTLDGN-SFYKIISNEEGYRHICYFQID--K------KDCTFITKGTWEVIGIEA-LTSD 375 (740)
T ss_dssp CEEEECSSSCSSSSSCCCCEECTTSS-EEEEEEECTTSCEEEEEEETT--C------SSCEESCCSSSCEEEEEE-ECSS
T ss_pred EeeeccCCceEccCcCCCceEcCCCC-EEEEEEEcCCCceEEEEEECC--C------CceEecccCCEEEEEEEE-EeCC
Confidence 22 44555554 789999999 554 554 444 57777776 2 123333334445555442 4465
Q ss_pred ceEEEEc
Q 038533 322 DWLAIAF 328 (337)
Q Consensus 322 ~l~~~~~ 328 (337)
.++..+.
T Consensus 376 ~i~f~~~ 382 (740)
T 4a5s_A 376 YLYYISN 382 (740)
T ss_dssp EEEEEES
T ss_pred EEEEEEe
Confidence 5665543
No 167
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.79 E-value=2.2e-16 Score=132.23 Aligned_cols=263 Identities=8% Similarity=0.017 Sum_probs=173.5
Q ss_pred CceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-
Q 038533 22 YPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG- 98 (337)
Q Consensus 22 ~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~- 98 (337)
..|.+++|+ +..++.... ++.++.|. . ..+.. ...+...+.+++|+|++. +++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~--~--~~~~~----~~~~~~~~~~~~~~~~g~---------l~~~~~~ 64 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIIS----ESELQTIT--A--EPWLE----ISKKGLQLEGLNFDRQGQ---------LFLLDVF 64 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCC----GGGSCEEE--C--EEEEE----EESSCCCEEEEEECTTSC---------EEEEETT
T ss_pred cccceeeecCCccceeEEee----cccCcccc--c--ceeEE----EeccCccccCcEECCCCC---------EEEEECC
Confidence 457788888 555555554 88888872 1 12221 134555678999999998 888776
Q ss_pred C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCC----CcEEEEeCCCccchhhhh--ccCCc
Q 038533 99 D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSID----TTCTIWDIEKGVVETQLI--AHDKE 171 (337)
Q Consensus 99 ~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d----g~i~v~d~~~~~~~~~~~--~~~~~ 171 (337)
+ .|.+||..+++. ......+. ..+.++++++ +++++++...+ +.|.+||.++++....+. .+...
T Consensus 65 ~~~i~~~d~~~~~~--~~~~~~~~-----~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 136 (333)
T 2dg1_A 65 EGNIFKINPETKEI--KRPFVSHK-----ANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYC 136 (333)
T ss_dssp TCEEEEECTTTCCE--EEEEECSS-----SSEEEEEECT-TSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCC
T ss_pred CCEEEEEeCCCCcE--EEEeeCCC-----CCcceEEECC-CCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCc
Confidence 4 899999988743 22222333 6799999998 88888877666 689999988776432221 23456
Q ss_pred eeEEEeC-CCcEEEEEcC------CCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEe-cCCEEEEEE
Q 038533 172 VYDICWG-EARVFASVSA------DGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILM-DSNKVVILD 243 (337)
Q Consensus 172 v~~~~~~-~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-d~~~i~i~d 243 (337)
+.+++++ +++++++... .+.|..+|..+++....... ......++|+| +++.|+++.. ++. |.+||
T Consensus 137 ~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~i~~~~-dg~~l~v~~~~~~~-i~~~d 210 (333)
T 2dg1_A 137 IDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN----ISVANGIALST-DEKVLWVTETTANR-LHRIA 210 (333)
T ss_dssp EEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE----ESSEEEEEECT-TSSEEEEEEGGGTE-EEEEE
T ss_pred ccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC----CCcccceEECC-CCCEEEEEeCCCCe-EEEEE
Confidence 8999999 6766666553 35676777655443222211 23578899999 8886665554 555 99999
Q ss_pred CCCCCCCeEEe--------ecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCC------C
Q 038533 244 IRSPTLPVAEL--------ERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAG------S 309 (337)
Q Consensus 244 ~~~~~~~~~~~--------~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~------~ 309 (337)
+...+..+..+ .++ ..+..++++++|. ++++...++.|.+||.. . .....+..+. .
T Consensus 211 ~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~-l~v~~~~~~~v~~~d~~--g------~~~~~~~~~~~~~g~~~ 280 (333)
T 2dg1_A 211 LEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDN-LYVAMYGQGRVLVFNKR--G------YPIGQILIPGRDEGHML 280 (333)
T ss_dssp ECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCC-EEEEEETTTEEEEECTT--S------CEEEEEECTTGGGTCSC
T ss_pred ecCCCcCcccccceEEEecCCC-CCCCceEECCCCC-EEEEEcCCCEEEEECCC--C------CEEEEEEcCCCcccccc
Confidence 97533333221 112 3678899999998 77777778899999875 2 1122222222 2
Q ss_pred ceeEEEEccCCCceEEEEcC
Q 038533 310 EINQLQWSPAQPDWLAIAFS 329 (337)
Q Consensus 310 ~v~~~~~~~~~~~l~~~~~d 329 (337)
.+.+++|+|++..|+.++.+
T Consensus 281 ~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 281 RSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp BCCEEEECTTSCEEEEEEEC
T ss_pred CcceEEECCCCCEEEEEeCc
Confidence 68999999998777665544
No 168
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.79 E-value=9.6e-18 Score=143.78 Aligned_cols=273 Identities=9% Similarity=0.028 Sum_probs=169.7
Q ss_pred eeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-
Q 038533 24 LYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D- 99 (337)
Q Consensus 24 v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~- 99 (337)
+.+++|+ |++||.... .+.+..|.+|+.+ +..... +...+......+.|+|+++ .|+..+ +
T Consensus 38 ~~~~~~SpdG~~l~~~~~-~~g~~~l~~~d~~--~~~~~~---l~~~~~~~~~~~~~spdg~---------~l~~~~~~~ 102 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGD-FDGNRNYYLLNLE--TQQAVQ---LTEGKGDNTFGGFISTDER---------AFFYVKNEL 102 (396)
T ss_dssp TTSCCBCTTSCEEEEEEC-TTSSCEEEEEETT--TTEEEE---CCCSSCBCTTTCEECTTSS---------EEEEEETTT
T ss_pred eecCcCCCCCCEEEEEEe-cCCCceEEEEECC--CCcEEE---eecCCCCccccceECCCCC---------EEEEEEcCC
Confidence 6788999 888888764 1112355555544 333332 1122233344488999998 776655 5
Q ss_pred eEEEEecCCCCccceeeecCCCCCcccCCeeE-------------------EEeecCCCCeEEEe-----eCCCcEEEEe
Q 038533 100 FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTS-------------------FDWNEIEPKRIGTC-----SIDTTCTIWD 155 (337)
Q Consensus 100 ~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~-------------------~~~~~~~~~~l~~~-----~~dg~i~v~d 155 (337)
.|.+|++.+++. ......+. ..... +.|+| +++.++.+ ..+..|.+||
T Consensus 103 ~l~~~d~~~~~~--~~~~~~~~-----~~~~~g~~l~~~~~~~~~~~~~~~~~~sp-dg~~~~~~~~~~~~~~~~l~~~d 174 (396)
T 3c5m_A 103 NLMKVDLETLEE--QVIYTVDE-----EWKGYGTWVANSDCTKLVGIEILKRDWQP-LTSWEKFAEFYHTNPTCRLIKVD 174 (396)
T ss_dssp EEEEEETTTCCE--EEEEECCT-----TEEEEEEEEECTTSSEEEEEEEEGGGCCC-CCSHHHHHHHHHTCCCEEEEEEE
T ss_pred cEEEEECCCCCc--EEEEeccc-----ccCCCCCEEEeccCCccccccccccccCC-CCcceeeeeeccCCCcceEEEEE
Confidence 899999998843 33333322 21111 35676 66666554 3567899999
Q ss_pred CCCccchhhhhccCCceeEEEeCC--CcEEEEEcCC------CeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCc
Q 038533 156 IEKGVVETQLIAHDKEVYDICWGE--ARVFASVSAD------GSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLR 227 (337)
Q Consensus 156 ~~~~~~~~~~~~~~~~v~~~~~~~--~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 227 (337)
+.+++..... .+...+..+.|++ ++.|+.++.+ ..|.+||+...+.... ... .....+..+.|+| +++
T Consensus 175 ~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l-~~~-~~~~~~~~~~~sp-dg~ 250 (396)
T 3c5m_A 175 IETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKI-KEH-AEGESCTHEFWIP-DGS 250 (396)
T ss_dssp TTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEES-SCC-CTTEEEEEEEECT-TSS
T ss_pred CCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEe-ecc-CCCccccceEECC-CCC
Confidence 9887754333 4667788999995 6667666543 3688899876553222 211 1123577889999 888
Q ss_pred EEEEEEecC----CEEEEEECCCCCCCeEEeecccceeeEEEeCC-CCCCeEEEEc----------------CCCcEEEE
Q 038533 228 YMATILMDS----NKVVILDIRSPTLPVAELERHRACVNAIAWAP-QSRRHICSVG----------------DDSQAFIW 286 (337)
Q Consensus 228 ~l~~~~~d~----~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~----------------~dg~i~iw 286 (337)
.|+.++.++ ..|++||+.+ ++. ..+..... .. +.|+| +++ +++.++ .++.|.+|
T Consensus 251 ~l~~~~~~~~~~~~~l~~~d~~~-g~~-~~l~~~~~-~~-~~~s~~dg~-~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~ 325 (396)
T 3c5m_A 251 AMAYVSYFKGQTDRVIYKANPET-LEN-EEVMVMPP-CS-HLMSNFDGS-LMVGDGCDAPVDVADADSYNIENDPFLYVL 325 (396)
T ss_dssp CEEEEEEETTTCCEEEEEECTTT-CCE-EEEEECCS-EE-EEEECSSSS-EEEEEECCC----------CCCCCCEEEEE
T ss_pred EEEEEecCCCCccceEEEEECCC-CCe-EEeeeCCC-CC-CCccCCCCc-eEEEecCCcceeeccccccccCCCCcEEEE
Confidence 877766541 2299999987 332 22222222 23 89999 998 777654 34789999
Q ss_pred eCCCCCCCCCCCCCceeeeeCCC-----------ceeEEEEccCCCceEEEEc-CCcEEEEe
Q 038533 287 ELPLPPVAGPNGIDPMSMYSAGS-----------EINQLQWSPAQPDWLAIAF-SNKMQLLK 336 (337)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~-----------~v~~~~~~~~~~~l~~~~~-d~~i~iw~ 336 (337)
|+..+. ...+..+.. .+..++|+|+|+.|+.++. ++...||.
T Consensus 326 d~~~~~--------~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~ 379 (396)
T 3c5m_A 326 NTKAKS--------AQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYI 379 (396)
T ss_dssp ETTTTB--------CCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEE
T ss_pred ecccCc--------eEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEE
Confidence 987222 223444443 2567899999988887664 56667764
No 169
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.76 E-value=1.3e-16 Score=136.53 Aligned_cols=230 Identities=10% Similarity=0.020 Sum_probs=150.1
Q ss_pred EEecCCCCcccCcCCccEEEEeC--C---eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCc
Q 038533 76 LMFDPNSSSRKSSSNRHLLASSG--D---FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTT 150 (337)
Q Consensus 76 i~~~~~~~~~~~~~~~~~l~~~~--~---~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~ 150 (337)
.+|+||++ .|+.++ + .|.+||+.++ +......++. ..+..+.|+| +++.|+.++.++.
T Consensus 41 ~~~SpDg~---------~l~~~~~~~g~~~l~~~d~~~g--~~~~lt~~~~-----~~~~~~~~sp-dg~~l~~~~~~~~ 103 (388)
T 3pe7_A 41 KCFTRDGS---------KLLFGGAFDGPWNYYLLDLNTQ--VATQLTEGRG-----DNTFGGFLSP-DDDALFYVKDGRN 103 (388)
T ss_dssp CCBCTTSC---------EEEEEECTTSSCEEEEEETTTC--EEEECCCSSC-----BCSSSCEECT-TSSEEEEEETTTE
T ss_pred ccCCCCCC---------EEEEEEcCCCCceEEEEeCCCC--ceEEeeeCCC-----CCccceEEcC-CCCEEEEEeCCCe
Confidence 78999998 666554 2 5888899888 4444455544 4555678999 9999999999999
Q ss_pred EEEEeCCCccchhhhhccCCceeEEEe--C-CCcEEEEE----------------------cCCCeEEEEECCCCCCcee
Q 038533 151 CTIWDIEKGVVETQLIAHDKEVYDICW--G-EARVFASV----------------------SADGSVRIFDLRDKEHSTI 205 (337)
Q Consensus 151 i~v~d~~~~~~~~~~~~~~~~v~~~~~--~-~~~~l~~~----------------------~~dg~i~iwd~~~~~~~~~ 205 (337)
|++||+.+++....+..+...+....| + ++.+++.. ..+..|.+||+.+++....
T Consensus 104 l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l 183 (388)
T 3pe7_A 104 LMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVI 183 (388)
T ss_dssp EEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEE
T ss_pred EEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEe
Confidence 999999998866555555555544444 5 56666632 2457899999998864433
Q ss_pred eecCCCCCCCceEEEeecCCCcEEEEEEecC-----CEEEEEECCCCCCCeEEeeccc--ceeeEEEeCCCCCCeEEE-E
Q 038533 206 IYESPQPDTPLLRLAWNKQDLRYMATILMDS-----NKVVILDIRSPTLPVAELERHR--ACVNAIAWAPQSRRHICS-V 277 (337)
Q Consensus 206 ~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~-----~~i~i~d~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~l~~-~ 277 (337)
.. +...+..+.|+|.+++.|+.....+ ..|.++|... .. ...+..+. ..+..++|+|+|+ .|+. +
T Consensus 184 ~~----~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~-~~-~~~l~~~~~~~~~~~~~~spdg~-~l~~~~ 256 (388)
T 3pe7_A 184 LQ----ENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDG-TN-MRKVKTHAEGESCTHEFWVPDGS-ALVYVS 256 (388)
T ss_dssp EE----ESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTS-CC-CEESCCCCTTEEEEEEEECTTSS-CEEEEE
T ss_pred ec----CCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCC-Cc-eEEeeeCCCCcccccceECCCCC-EEEEEe
Confidence 32 2356889999985677777666532 1388888765 32 34444443 3578899999999 5544 3
Q ss_pred cCCC----cEEEEeCCCCCCCCCCCCCceeeeeCCC------ceeEEEEccCCCceEEE---------EcCCcEEEEeC
Q 038533 278 GDDS----QAFIWELPLPPVAGPNGIDPMSMYSAGS------EINQLQWSPAQPDWLAI---------AFSNKMQLLKV 337 (337)
Q Consensus 278 ~~dg----~i~iw~~~~~~~~~~~~~~~~~~~~~~~------~v~~~~~~~~~~~l~~~---------~~d~~i~iw~l 337 (337)
..++ .|.+||+..++ ...+..... ....++|+|||+.|+.. ..+..|.+|++
T Consensus 257 ~~~~~~~~~l~~~d~~~g~--------~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~ 327 (388)
T 3pe7_A 257 YLKGSPDRFIYSADPETLE--------NRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNM 327 (388)
T ss_dssp EETTCCCEEEEEECTTTCC--------EEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEET
T ss_pred cCCCCCcceEEEEecCCCc--------eEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEec
Confidence 3322 39999998322 111111111 01223799999888754 34568888874
No 170
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.76 E-value=1e-15 Score=128.05 Aligned_cols=238 Identities=13% Similarity=0.042 Sum_probs=162.4
Q ss_pred CCCCeEEEecCCCCcccCcCCccEEEEeCC--------------------------eEEEEecCCCCccceeeec-CCCC
Q 038533 70 PYPPTKLMFDPNSSSRKSSSNRHLLASSGD--------------------------FLRLWDVGDSSIEPVAVLN-NSKS 122 (337)
Q Consensus 70 ~~~i~~i~~~~~~~~~~~~~~~~~l~~~~~--------------------------~v~vw~~~~~~~~~~~~~~-~~~~ 122 (337)
-+.+.+|+++|++. ++++..+ .|.+||..+++ ....+. ++-
T Consensus 23 l~~v~~va~d~~G~---------l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~--~~~~~~~~~~- 90 (329)
T 3fvz_A 23 PGQVSGVALDSKNN---------LVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAE--ILQSSGKNLF- 90 (329)
T ss_dssp CSCEEEEEECTTCC---------EEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCC--EEEEECTTTC-
T ss_pred cCCceEEEECCCCC---------EEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCe--EEeccCCCcc-
Confidence 36689999999998 8887663 38999998874 343333 222
Q ss_pred CcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCcc-chhhh---------hccCCceeEEEeCC--CcEEEEEc-CC
Q 038533 123 SEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGV-VETQL---------IAHDKEVYDICWGE--ARVFASVS-AD 189 (337)
Q Consensus 123 ~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~-~~~~~---------~~~~~~v~~~~~~~--~~~l~~~~-~d 189 (337)
.....++++| +++++++...++.|++||..... .+..+ ..+......+++++ +.++++.+ .+
T Consensus 91 ----~~p~gia~d~-~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~ 165 (329)
T 3fvz_A 91 ----YLPHGLSIDT-DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCN 165 (329)
T ss_dssp ----SSEEEEEECT-TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSC
T ss_pred ----CCceEEEECC-CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCC
Confidence 5688999998 89999988889999999985442 33333 23444688999994 56666665 58
Q ss_pred CeEEEEECCCCCCceeeecC-------CCCCCCceEEEeecCC-CcEEEEEEecCCEEEEEECCCCCCCeEEee--cccc
Q 038533 190 GSVRIFDLRDKEHSTIIYES-------PQPDTPLLRLAWNKQD-LRYMATILMDSNKVVILDIRSPTLPVAELE--RHRA 259 (337)
Q Consensus 190 g~i~iwd~~~~~~~~~~~~~-------~~~~~~i~~~~~~~~~-~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~--~~~~ 259 (337)
+.|++||. .++....+... ..+-.....++++| + +.++++...++. |++||..+ ++.+..+. .+..
T Consensus 166 ~~I~~~~~-~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~-~~g~l~v~d~~~~~-I~~~~~~~-G~~~~~~~~~~~~~ 241 (329)
T 3fvz_A 166 SRIVQFSP-SGKFVTQWGEESSGSSPRPGQFSVPHSLALVP-HLDQLCVADRENGR-IQCFKTDT-KEFVREIKHASFGR 241 (329)
T ss_dssp CEEEEECT-TSCEEEEECEECCSSSCCTTEESCEEEEEEET-TTTEEEEEETTTTE-EEEEETTT-CCEEEEECCTTTTT
T ss_pred CeEEEEcC-CCCEEEEeccCCCCCCCCCcccCCCcEEEEEC-CCCEEEEEECCCCE-EEEEECCC-CcEEEEEeccccCC
Confidence 99999994 44433332211 01123478999999 6 555555555555 99999985 55566663 3456
Q ss_pred eeeEEEeCC------CCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceee----eeCCCceeEEEEccCCCceEEEEcC
Q 038533 260 CVNAIAWAP------QSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSM----YSAGSEINQLQWSPAQPDWLAIAFS 329 (337)
Q Consensus 260 ~v~~~~~~~------~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d 329 (337)
.+..++|+| ++. .+++...+..|++|+...++ .... ..+...+..++++|+|..+++...+
T Consensus 242 ~~~~~~~~pg~~~~~~g~-~~v~~~~~~~v~~~~~~~g~--------~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~ 312 (329)
T 3fvz_A 242 NVFAISYIPGFLFAVNGK-PYFGDQEPVQGFVMNFSSGE--------IIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHT 312 (329)
T ss_dssp CEEEEEEETTEEEEEECC-CCTTCSCCCCEEEEETTTCC--------EEEEECCSSSCCSSEEEEEECTTSEEEEEESSS
T ss_pred CcceeeecCCEEEEeCCC-EEeccCCCcEEEEEEcCCCe--------EEEEEcCCCCccCCeeEEEECCCCCEEEEECCC
Confidence 788999999 333 22333345589999988322 2222 2456678999999999655666678
Q ss_pred CcEEEEeC
Q 038533 330 NKMQLLKV 337 (337)
Q Consensus 330 ~~i~iw~l 337 (337)
+.|++|++
T Consensus 313 ~~I~~~~~ 320 (329)
T 3fvz_A 313 NTVWKFTL 320 (329)
T ss_dssp CCEEEEEE
T ss_pred CEEEEEeC
Confidence 99999974
No 171
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.76 E-value=3.3e-15 Score=124.85 Aligned_cols=244 Identities=11% Similarity=0.063 Sum_probs=167.7
Q ss_pred CCceeEEEEe--cceEEEeeeeccCc------------------------ceEEEEEecCCCcceecCCCcCCCCCCCCe
Q 038533 21 PYPLYAMAVC--GQRIAVGSFIEDYT------------------------NRVDVVSFEPESLSIKTHPSLSFDHPYPPT 74 (337)
Q Consensus 21 ~~~v~~~~~s--~~~la~g~~~~~~d------------------------~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~ 74 (337)
-+.+.+++++ |+++++... + +.|.+|+.+. +.+.. .....+-....
T Consensus 23 l~~v~~va~d~~G~l~v~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~--g~~~~--~~~~~~~~~p~ 94 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRG----DHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNN--AEILQ--SSGKNLFYLPH 94 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECT----TCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTT--CCEEE--EECTTTCSSEE
T ss_pred cCCceEEEECCCCCEEEEeCC----CCeEEeeccCcceeecccccccccCCcEEEEECCC--CeEEe--ccCCCccCCce
Confidence 3679999999 777766653 3 3677765543 33322 11123445788
Q ss_pred EEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCC----CCcccCCeeEEEeecCCCCeEEEee-C
Q 038533 75 KLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSK----SSEFCAPLTSFDWNEIEPKRIGTCS-I 147 (337)
Q Consensus 75 ~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~l~~~~-~ 147 (337)
.++++|++. ++++.. + .|++|+..... ..+..+.... ..........++++|.++.++++.+ .
T Consensus 95 gia~d~~g~---------l~v~d~~~~~v~~~~~~g~~-~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~ 164 (329)
T 3fvz_A 95 GLSIDTDGN---------YWVTDVALHQVFKLDPHSKE-GPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC 164 (329)
T ss_dssp EEEECTTSC---------EEEEETTTTEEEEECTTCSS-CCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS
T ss_pred EEEECCCCC---------EEEEECCCCEEEEEeCCCCe-EEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC
Confidence 999999998 888877 4 99999986542 2344442100 0111146889999985677777775 6
Q ss_pred CCcEEEEeCCCccchhhhhc----------cCCceeEEEeC-C-CcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCC
Q 038533 148 DTTCTIWDIEKGVVETQLIA----------HDKEVYDICWG-E-ARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTP 215 (337)
Q Consensus 148 dg~i~v~d~~~~~~~~~~~~----------~~~~v~~~~~~-~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 215 (337)
++.|++|| .+++.+..+.. +......++++ + +.++++...++.|++||..+++....+. ...+...
T Consensus 165 ~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~-~~~~~~~ 242 (329)
T 3fvz_A 165 NSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIK-HASFGRN 242 (329)
T ss_dssp CCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEC-CTTTTTC
T ss_pred CCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEe-ccccCCC
Confidence 89999999 46665555532 22347899999 5 6777888889999999998776554443 2234567
Q ss_pred ceEEEeecCCCcEEEEEEe-------cCCEEEEEECCCCCCCeEEe---ecccceeeEEEeCCCCCCeEEEEcCCCcEEE
Q 038533 216 LLRLAWNKQDLRYMATILM-------DSNKVVILDIRSPTLPVAEL---ERHRACVNAIAWAPQSRRHICSVGDDSQAFI 285 (337)
Q Consensus 216 i~~~~~~~~~~~~l~~~~~-------d~~~i~i~d~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 285 (337)
+..++|+| +..+.+.+. +.. |++||..+ ++.+..+ ..+...+..++++|+|. ++++...++.|++
T Consensus 243 ~~~~~~~p--g~~~~~~g~~~v~~~~~~~-v~~~~~~~-g~~~~~~~~~~~~~~~p~~ia~~~dG~-lyvad~~~~~I~~ 317 (329)
T 3fvz_A 243 VFAISYIP--GFLFAVNGKPYFGDQEPVQ-GFVMNFSS-GEIIDVFKPVRKHFDMPHDIVASEDGT-VYIGDAHTNTVWK 317 (329)
T ss_dssp EEEEEEET--TEEEEEECCCCTTCSCCCC-EEEEETTT-CCEEEEECCSSSCCSSEEEEEECTTSE-EEEEESSSCCEEE
T ss_pred cceeeecC--CEEEEeCCCEEeccCCCcE-EEEEEcCC-CeEEEEEcCCCCccCCeeEEEECCCCC-EEEEECCCCEEEE
Confidence 88999987 333333221 225 99999987 5566665 35666789999999997 9999999999999
Q ss_pred EeCC
Q 038533 286 WELP 289 (337)
Q Consensus 286 w~~~ 289 (337)
|++.
T Consensus 318 ~~~~ 321 (329)
T 3fvz_A 318 FTLT 321 (329)
T ss_dssp EEEE
T ss_pred EeCC
Confidence 9987
No 172
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.76 E-value=6.2e-16 Score=130.21 Aligned_cols=257 Identities=14% Similarity=0.148 Sum_probs=165.8
Q ss_pred ceeEEEEecceEEEeeeec-----cCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEe
Q 038533 23 PLYAMAVCGQRIAVGSFIE-----DYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASS 97 (337)
Q Consensus 23 ~v~~~~~s~~~la~g~~~~-----~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~ 97 (337)
.+...++.|+++|...... .+++.|.+|+++.. .... . ..+..++|+|+++ .|+..
T Consensus 16 ~~~~~~~dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~--~~~~-----l---~~~~~~~~SpDg~---------~la~~ 76 (347)
T 2gop_A 16 YLSDPRTKGELVAYVLTKANLKDNKYENTIVIENLKNN--ARRF-----I---ENATMPRISPDGK---------KIAFM 76 (347)
T ss_dssp EEEEEEEETTEEEEEEEEEETTTTEEEEEEEEEETTTC--CEEE-----E---ESCEEEEECTTSS---------EEEEE
T ss_pred EcccceECCcEEEEEEeecCcccCCccceEEEEeCCCC--ceEE-----c---ccCCCeEECCCCC---------EEEEE
Confidence 3555555777776653210 12556777666543 3332 1 4688999999998 77665
Q ss_pred C-----C--eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCC----------------------
Q 038533 98 G-----D--FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSID---------------------- 148 (337)
Q Consensus 98 ~-----~--~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d---------------------- 148 (337)
+ + .|.+|++.+++ ....... . . +..++|+| +++.|+.++.+
T Consensus 77 ~~~~~~~~~~l~~~~~~~g~--~~~l~~~-~-----~-~~~~~wsp-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 146 (347)
T 2gop_A 77 RANEEKKVSEIWVADLETLS--SKKILEA-K-----N-IRSLEWNE-DSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGF 146 (347)
T ss_dssp EEETTTTEEEEEEEETTTTE--EEEEEEE-S-----E-EEEEEECT-TSSEEEEEEECCCC---------CCCC------
T ss_pred EeccCCCcceEEEEECCCCc--eEEEEcC-C-----C-ccceeECC-CCCEEEEEEccCCCcCCcEEEcccceeecCccc
Confidence 3 2 58888988873 3333322 2 4 88999999 89888887632
Q ss_pred -----CcEEEEeCCCccchhhhhccCCceeEEEeC-CCcEEEEEcCCC-------eEEEEECCCCCCceeeecCCCCCCC
Q 038533 149 -----TTCTIWDIEKGVVETQLIAHDKEVYDICWG-EARVFASVSADG-------SVRIFDLRDKEHSTIIYESPQPDTP 215 (337)
Q Consensus 149 -----g~i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg-------~i~iwd~~~~~~~~~~~~~~~~~~~ 215 (337)
..|.+||+.+++.+..+.. . .+..++|+ ++ +++++..++ ...+|.+.+++ ...+.. + ..
T Consensus 147 ~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~l~~---~-~~ 218 (347)
T 2gop_A 147 FDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGK-EEKMFE---K-VS 218 (347)
T ss_dssp ---CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTE-EEEEEE---E-ES
T ss_pred ccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCc-eEEecc---C-cc
Confidence 5799999988876344444 3 78899999 56 777665542 33444444333 222221 1 33
Q ss_pred ceEEEeecCCCcEEEEEEecC-------CEEEEEECCCCCCCeEEeecccceeeE-EEeCCCCCCeEEEEcCCCcEEEEe
Q 038533 216 LLRLAWNKQDLRYMATILMDS-------NKVVILDIRSPTLPVAELERHRACVNA-IAWAPQSRRHICSVGDDSQAFIWE 287 (337)
Q Consensus 216 i~~~~~~~~~~~~l~~~~~d~-------~~i~i~d~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~l~~~~~dg~i~iw~ 287 (337)
+..+ +| +++.|+.++.+. ..|.+|| + ++.......+...+.. +.|+ ++ ++++++.++.+++|
T Consensus 219 ~~~~--sp-dg~~l~~~~~~~~~~~~~~~~l~~~d--~-~~~~~l~~~~~~~~~~~~~~s-dg--~~~~~~~~~~~~l~- 288 (347)
T 2gop_A 219 FYAV--DS-DGERILLYGKPEKKYMSEHNKLYIYD--G-KEVMGILDEVDRGVGQAKIKD-GK--VYFTLFEEGSVNLY- 288 (347)
T ss_dssp EEEE--EE-CSSCEEEEECCSSSCCCSSCEEEEEC--S-SCEEESSTTCCSEEEEEEEET-TE--EEEEEEETTEEEEE-
T ss_pred eeeE--CC-CCCEEEEEEccccCCccccceEEEEC--C-CceEeccccCCcccCCccEEc-Cc--EEEEEecCCcEEEE-
Confidence 4443 88 898888777543 2488888 3 4433334455677886 8999 76 88899999999999
Q ss_pred CCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEcCCcE-EEEe
Q 038533 288 LPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKM-QLLK 336 (337)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i-~iw~ 336 (337)
+. + . ....+..+...|.+++|+| ..+++++.++.. .||.
T Consensus 289 ~~--~-g-----~~~~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~ 328 (347)
T 2gop_A 289 IW--D-G-----EIKPIAKGRHWIMGFDVDE--IVVYLKETATRLRELFT 328 (347)
T ss_dssp EE--S-S-----SEEEEECSSSEEEEEEESS--SEEEEEECSSSCCEEEE
T ss_pred Ec--C-C-----ceEEEecCCCeEEeeeeeC--cEEEEEcCCCChHHheE
Confidence 87 2 1 1344445677899999999 466677766654 7774
No 173
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.75 E-value=3.1e-16 Score=131.94 Aligned_cols=241 Identities=8% Similarity=0.047 Sum_probs=148.3
Q ss_pred eeeeeCCC--ceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCC-----CCCCeEEEecCCCCcc
Q 038533 15 SVTHESPY--PLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDH-----PYPPTKLMFDPNSSSR 85 (337)
Q Consensus 15 ~~~~~~~~--~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~-----~~~i~~i~~~~~~~~~ 85 (337)
+..+.... .+..++|+ +++++++.. .++.|.+|+.......... ...+ ...+..++|+|+++
T Consensus 34 ~~~~~~~~~~~~~~~~~s~dg~~~~v~~~---~~~~i~~~d~~t~~~~~~~----~~~~~~~~~~~~~~~~~~spdg~-- 104 (349)
T 1jmx_B 34 YKSCVMPDKFGPGTAMMAPDNRTAYVLNN---HYGDIYGIDLDTCKNTFHA----NLSSVPGEVGRSMYSFAISPDGK-- 104 (349)
T ss_dssp EEEEECSSCCSSCEEEECTTSSEEEEEET---TTTEEEEEETTTTEEEEEE----ESCCSTTEEEECSSCEEECTTSS--
T ss_pred EEEEecCCCCCCceeEECCCCCEEEEEeC---CCCcEEEEeCCCCcEEEEE----EcccccccccccccceEECCCCC--
Confidence 34444444 68899999 666655442 3889999887654332221 1222 23488999999998
Q ss_pred cCcCCccEEEEeC--------------CeEEEEecCCCCc-cceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCc
Q 038533 86 KSSSNRHLLASSG--------------DFLRLWDVGDSSI-EPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTT 150 (337)
Q Consensus 86 ~~~~~~~~l~~~~--------------~~v~vw~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~ 150 (337)
+|++++ +.|.+||+.+++. +....+..+ ..+.+++|+| +++ +++++ +.
T Consensus 105 -------~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~------~~~~~~~~s~-dg~-l~~~~--~~ 167 (349)
T 1jmx_B 105 -------EVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP------RQVYLMRAAD-DGS-LYVAG--PD 167 (349)
T ss_dssp -------EEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECC------SSCCCEEECT-TSC-EEEES--SS
T ss_pred -------EEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCC------CcccceeECC-CCc-EEEcc--Cc
Confidence 776665 4999999988532 222333332 4588999999 888 55554 34
Q ss_pred EEEEeCCCccchhhhhccC-C-----------------------ceeEEEeC-CCcEEEE-EcCCCeEEEEECCCCCCce
Q 038533 151 CTIWDIEKGVVETQLIAHD-K-----------------------EVYDICWG-EARVFAS-VSADGSVRIFDLRDKEHST 204 (337)
Q Consensus 151 i~v~d~~~~~~~~~~~~~~-~-----------------------~v~~~~~~-~~~~l~~-~~~dg~i~iwd~~~~~~~~ 204 (337)
|.+||+.+++.+..+..+. . ....++++ ++..... ......+..+|..+++...
T Consensus 168 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (349)
T 1jmx_B 168 IYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHT 247 (349)
T ss_dssp EEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEE
T ss_pred EEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEe
Confidence 9999999887665544221 0 12334443 1100000 0000112224444443221
Q ss_pred eeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEE
Q 038533 205 IIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAF 284 (337)
Q Consensus 205 ~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 284 (337)
.... .....+..++|+|.++++++++ ++. |.+||+.+ .+.+..+.. ...+.+++|+|+++ +|++++.++.|.
T Consensus 248 ~~~~--~~~~~~~~~~~sp~dg~~l~~~--~~~-v~~~d~~~-~~~~~~~~~-~~~~~~~~~s~dg~-~l~~~~~~~~v~ 319 (349)
T 1jmx_B 248 QEFA--DLTELYFTGLRSPKDPNQIYGV--LNR-LAKYDLKQ-RKLIKAANL-DHTYYCVAFDKKGD-KLYLGGTFNDLA 319 (349)
T ss_dssp EEEE--ECSSCEEEEEECSSCTTEEEEE--ESE-EEEEETTT-TEEEEEEEC-SSCCCEEEECSSSS-CEEEESBSSEEE
T ss_pred cccc--cCCCcceeeEecCCCCCEEEEE--cCe-EEEEECcc-CeEEEEEcC-CCCccceEECCCCC-EEEEecCCCeEE
Confidence 1111 1345678899998567777777 666 99999987 555555543 34578999999998 777788899999
Q ss_pred EEeCC
Q 038533 285 IWELP 289 (337)
Q Consensus 285 iw~~~ 289 (337)
+||+.
T Consensus 320 v~d~~ 324 (349)
T 1jmx_B 320 VFNPD 324 (349)
T ss_dssp EEETT
T ss_pred EEecc
Confidence 99998
No 174
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.75 E-value=1.6e-15 Score=124.19 Aligned_cols=235 Identities=11% Similarity=0.095 Sum_probs=161.6
Q ss_pred CceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCC--cCCCCCCCCeEEEe-cCCCCcccCcCCccEEEE
Q 038533 22 YPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPS--LSFDHPYPPTKLMF-DPNSSSRKSSSNRHLLAS 96 (337)
Q Consensus 22 ~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~--~~~~~~~~i~~i~~-~~~~~~~~~~~~~~~l~~ 96 (337)
..+.+++++ ++++++... ++.|.+|+.+.. ....... ....+...+..+++ .+++. ++++
T Consensus 30 ~~p~~v~~~~~g~l~v~~~~----~~~i~~~d~~g~--~~~~~~~~~~~~~~~~~p~~i~~~~~~g~---------l~v~ 94 (286)
T 1q7f_A 30 TEPSGVAVNAQNDIIVADTN----NHRIQIFDKEGR--FKFQFGECGKRDSQLLYPNRVAVVRNSGD---------IIVT 94 (286)
T ss_dssp SCEEEEEECTTCCEEEEEGG----GTEEEEECTTSC--EEEEECCBSSSTTCBSSEEEEEEETTTTE---------EEEE
T ss_pred CCCceEEECCCCCEEEEECC----CCEEEEECCCCc--EEEEecccCCCcccccCceEEEEEcCCCe---------EEEE
Confidence 458899998 666666554 889999876522 2221000 01234456889999 57776 7777
Q ss_pred eC--C-eEEEEecCCCCccceeeecC-CCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhh--ccCC
Q 038533 97 SG--D-FLRLWDVGDSSIEPVAVLNN-SKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLI--AHDK 170 (337)
Q Consensus 97 ~~--~-~v~vw~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~--~~~~ 170 (337)
.. + .|.+|+. ++ +....+.. +. ..+.++++++ +++++++...++.|.+||.. ++.+..+. .+..
T Consensus 95 ~~~~~~~i~~~d~-~g--~~~~~~~~~~~-----~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~ 164 (286)
T 1q7f_A 95 ERSPTHQIQIYNQ-YG--QFVRKFGATIL-----QHPRGVTVDN-KGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLE 164 (286)
T ss_dssp ECGGGCEEEEECT-TS--CEEEEECTTTC-----SCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCS
T ss_pred cCCCCCEEEEECC-CC--cEEEEecCccC-----CCceEEEEeC-CCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccC
Confidence 64 5 9999994 44 33444432 22 5688999998 88888888788999999964 44444442 3445
Q ss_pred ceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecC-CEEEEEECCCCC
Q 038533 171 EVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS-NKVVILDIRSPT 248 (337)
Q Consensus 171 ~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~-~~i~i~d~~~~~ 248 (337)
.+..++++ +++++++...++.|++||.... ....+ ....+......+++++ +++++++...++ . |.+||.. +
T Consensus 165 ~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-~~~~~-~~~g~~~~p~~i~~d~-~G~l~v~~~~~~~~-i~~~~~~--g 238 (286)
T 1q7f_A 165 FPNGVVVNDKQEIFISDNRAHCVKVFNYEGQ-YLRQI-GGEGITNYPIGVGINS-NGEILIADNHNNFN-LTIFTQD--G 238 (286)
T ss_dssp SEEEEEECSSSEEEEEEGGGTEEEEEETTCC-EEEEE-SCTTTSCSEEEEEECT-TCCEEEEECSSSCE-EEEECTT--S
T ss_pred CcEEEEECCCCCEEEEECCCCEEEEEcCCCC-EEEEE-ccCCccCCCcEEEECC-CCCEEEEeCCCCEE-EEEECCC--C
Confidence 68999999 6777777788999999997543 22222 2212235678999999 888777776665 5 9999964 4
Q ss_pred CCeEEeecccc--eeeEEEeCCCCCCeEEEEcCCCcEEEEeCC
Q 038533 249 LPVAELERHRA--CVNAIAWAPQSRRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 249 ~~~~~~~~~~~--~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 289 (337)
+.+..+..+.. .+..++++|+|. ++++ +.|+.|++|++.
T Consensus 239 ~~~~~~~~~~~~~~~~~i~~~~~g~-l~vs-~~~~~v~v~~~~ 279 (286)
T 1q7f_A 239 QLISALESKVKHAQCFDVALMDDGS-VVLA-SKDYRLYIYRYV 279 (286)
T ss_dssp CEEEEEEESSCCSCEEEEEEETTTE-EEEE-ETTTEEEEEECS
T ss_pred CEEEEEcccCCCCcceeEEECCCCc-EEEE-CCCCeEEEEEcc
Confidence 45666654433 467999999997 7777 569999999987
No 175
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.74 E-value=6.3e-15 Score=124.64 Aligned_cols=274 Identities=13% Similarity=0.090 Sum_probs=173.1
Q ss_pred eeeeeCCCceeEEEEe--cceEEEeeee------ccCcceEEEEEecCCCcceecCCCcC---CCCCCCCeEEEecCCCC
Q 038533 15 SVTHESPYPLYAMAVC--GQRIAVGSFI------EDYTNRVDVVSFEPESLSIKTHPSLS---FDHPYPPTKLMFDPNSS 83 (337)
Q Consensus 15 ~~~~~~~~~v~~~~~s--~~~la~g~~~------~~~d~~i~i~~~~~~~~~~~~~~~~~---~~~~~~i~~i~~~~~~~ 83 (337)
+..+...... .++|+ +++|+++... ++.++.|.+||.......... .+. ..+......++++|+++
T Consensus 44 ~~~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i--~~~~~~~~~g~~p~~i~~spdg~ 120 (361)
T 2oiz_A 44 LGMVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEI--SLPPKRVQGLNYDGLFRQTTDGK 120 (361)
T ss_dssp EEEEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEE--EECTTBCCBCCCGGGEEECTTSS
T ss_pred EEEecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEE--EcCccccccCCCcceEEECCCCC
Confidence 3344443333 88999 8888887620 112678999886643322111 110 11345678899999999
Q ss_pred cccCcCCccEEEEe--C-C-eEEEEecCCCCccceee-ecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCC
Q 038533 84 SRKSSSNRHLLASS--G-D-FLRLWDVGDSSIEPVAV-LNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEK 158 (337)
Q Consensus 84 ~~~~~~~~~~l~~~--~-~-~v~vw~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 158 (337)
+|+++ + + .|.+||+.++ +.+.. +.. .....+.+.|.....+++.+.||.+.+|++..
T Consensus 121 ---------~l~v~n~~~~~~v~v~d~~~~--~~~~~~i~~-------~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~ 182 (361)
T 2oiz_A 121 ---------FIVLQNASPATSIGIVDVAKG--DYVEDVTAA-------AGCWSVIPQPNRPRSFMTICGDGGLLTINLGE 182 (361)
T ss_dssp ---------EEEEEEESSSEEEEEEETTTT--EEEEEEGGG-------TTEEEEEECTTSSSEEEEEETTSSEEEEEECT
T ss_pred ---------EEEEECCCCCCeEEEEECCCC--cEEEEEecC-------CCcceeEEcCCCCeeEEEECCCCcEEEEEECC
Confidence 66554 2 4 9999999988 55555 543 22233556673447888889999999999865
Q ss_pred -ccch------hhhhccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceee-ecCCC--------CCCCceEEEe
Q 038533 159 -GVVE------TQLIAHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTII-YESPQ--------PDTPLLRLAW 221 (337)
Q Consensus 159 -~~~~------~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~--------~~~~i~~~~~ 221 (337)
++.. ..+.....++ .+.+. ++..++..+.++.+.++|+......... ..... .......++|
T Consensus 183 ~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~ 261 (361)
T 2oiz_A 183 DGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGL 261 (361)
T ss_dssp TSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEE
T ss_pred CCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEE
Confidence 4433 1222222222 22233 4567777788999999999765422111 00000 0012223789
Q ss_pred ecCCCcEEEEEEe-c---------CCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCC
Q 038533 222 NKQDLRYMATILM-D---------SNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLP 291 (337)
Q Consensus 222 ~~~~~~~l~~~~~-d---------~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 291 (337)
+| +++.++++.. + ...|.+||+.+ .+.+.++..+. +..++|+|+|+ +|++++. +.|.+||....
T Consensus 262 ~~-dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t-~~~v~~i~~~~--p~~ia~spdg~-~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 262 HR-ASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKT-KQRVARIPGRD--ALSMTIDQQRN-LMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp ET-TTTEEEEEEESSCCTTCTTCCCSEEEEEETTT-TEEEEEEECTT--CCEEEEETTTT-EEEEECS-SCEEEEECSSS
T ss_pred ec-CCCeEEEEEccCCCcccccCCCceEEEEECCC-CcEEEEEecCC--eeEEEECCCCC-EEEEeCC-CeEEEEECCCC
Confidence 99 7777777654 2 12499999998 66788888776 89999999999 8888886 99999999822
Q ss_pred CCCCCCCCCceeeeeCCCceeEEEEccCCC
Q 038533 292 PVAGPNGIDPMSMYSAGSEINQLQWSPAQP 321 (337)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 321 (337)
++. ....+..+......++++|+|.
T Consensus 336 ~l~-----~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 336 EPK-----LLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp SCE-----EEEEETTSCSSEEEEEECCCSC
T ss_pred cce-----eeEEeccCCCCcEEEEecCCCC
Confidence 101 1223335677789999999985
No 176
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.72 E-value=5.7e-16 Score=141.86 Aligned_cols=238 Identities=7% Similarity=-0.061 Sum_probs=161.1
Q ss_pred CCCCCCCeEEEecCCCCcccCcCCccEEEEe--C-C-eEEEEecCCCCccceeeecCCCCCcccCCee---------EEE
Q 038533 67 FDHPYPPTKLMFDPNSSSRKSSSNRHLLASS--G-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLT---------SFD 133 (337)
Q Consensus 67 ~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~--~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~---------~~~ 133 (337)
..|...+..++|+++.. +++.. + + ...||....+ .....+..+. ..+. ...
T Consensus 20 ~~~~~~~~~~~~s~~~~---------~~~~~~~~~~~~~~l~~~~~~--~~~~~l~~~~-----~~~~~~~~~~~~~~~~ 83 (662)
T 3azo_A 20 ASRSGRPACVGAVGDEV---------WWVAPRPAEAGRATLVRRRAD--GAEESALPAP-----WNVRNRVFEYSGFPWA 83 (662)
T ss_dssp HHTCSCCEEEEEETTEE---------EEEEEETTTTTEEEEEEECTT--SCEEESSCTT-----CCBCCCGGGTCCCCEE
T ss_pred hhcCCccceeEEcCCeE---------EEEecCcccCCcEEEEEECCC--CCcceeCCCC-----ccccccccccCCccce
Confidence 46888999999998876 66666 3 3 8889986443 2344455544 3344 555
Q ss_pred ee--cCCCCe-EEEeeC-CCcEEEEeCC--C-ccchhhhhc-----cCCceeEEEeC-CCcEEEEEcCC----------C
Q 038533 134 WN--EIEPKR-IGTCSI-DTTCTIWDIE--K-GVVETQLIA-----HDKEVYDICWG-EARVFASVSAD----------G 190 (337)
Q Consensus 134 ~~--~~~~~~-l~~~~~-dg~i~v~d~~--~-~~~~~~~~~-----~~~~v~~~~~~-~~~~l~~~~~d----------g 190 (337)
|+ | +++. |+.++. +..|.++++. . ++ ...+.. |...+.+++|+ +++.|++++.+ .
T Consensus 84 ~~~SP-Dg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~ 161 (662)
T 3azo_A 84 GVPRP-AGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRR 161 (662)
T ss_dssp EECCS-SSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEE
T ss_pred eeeec-CCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCcee
Confidence 65 7 8887 665543 5677777775 2 33 334443 56678899999 78999988876 5
Q ss_pred eEEEEECCC------CCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecC-------CEEEEEECCCCC---CCeEEe
Q 038533 191 SVRIFDLRD------KEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS-------NKVVILDIRSPT---LPVAEL 254 (337)
Q Consensus 191 ~i~iwd~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~-------~~i~i~d~~~~~---~~~~~~ 254 (337)
.|++||+.+ ++. ..+.. .+...+..++|+| ++++|+.++.++ ..|++||+...+ ......
T Consensus 162 ~i~~~~~~~~~~~~~~~~-~~l~~--~~~~~~~~~~~Sp-DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~ 237 (662)
T 3azo_A 162 FLAAVPLDGSAAADRSAV-RELSD--DAHRFVTGPRLSP-DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL 237 (662)
T ss_dssp EEEEEETTSTTTTCGGGS-EESSC--SCSSEECCCEECT-TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE
T ss_pred EEEEEECCCCccccCCce-eEEEe--cCCCcccCceECC-CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC
Confidence 899999987 442 22220 1235678899999 999999887654 359999998323 333333
Q ss_pred ecccceeeEEEeCCCCCCeEEEEcCCCc--EEEEeCCCCCCCCCCCCCceeeeeC-CCc--------eeEEEEccCCCce
Q 038533 255 ERHRACVNAIAWAPQSRRHICSVGDDSQ--AFIWELPLPPVAGPNGIDPMSMYSA-GSE--------INQLQWSPAQPDW 323 (337)
Q Consensus 255 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~--i~iw~~~~~~~~~~~~~~~~~~~~~-~~~--------v~~~~~~~~~~~l 323 (337)
..|...+..++|+|+|+ +++++..++. |.+|++..++ ...+..+ ... +..++|+|++..+
T Consensus 238 ~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~--------~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~ 308 (662)
T 3azo_A 238 GGPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATGA--------ATQLCRREEEFAGPLWTPGMRWFAPLANGLIA 308 (662)
T ss_dssp EETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTCC--------EEESSCCSSBSSCCCCSTTCCSEEECTTSCEE
T ss_pred CCCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCCCc--------eeecccccccccCccccccCceEeEeCCCEEE
Confidence 44567899999999999 9999998884 4455543111 1111111 111 5678999999877
Q ss_pred EEEEcCCcEEEEe
Q 038533 324 LAIAFSNKMQLLK 336 (337)
Q Consensus 324 ~~~~~d~~i~iw~ 336 (337)
+++.. +.++||.
T Consensus 309 ~~~~~-~~~~l~~ 320 (662)
T 3azo_A 309 VVHGK-GAAVLGI 320 (662)
T ss_dssp EEEBS-SSCEEEE
T ss_pred EEEEc-CccEEEE
Confidence 77777 9999984
No 177
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.72 E-value=9.3e-15 Score=118.48 Aligned_cols=234 Identities=9% Similarity=-0.017 Sum_probs=156.3
Q ss_pred CCeEEEecCCCCcccCcCCccEEE-EeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCC
Q 038533 72 PPTKLMFDPNSSSRKSSSNRHLLA-SSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSID 148 (337)
Q Consensus 72 ~i~~i~~~~~~~~~~~~~~~~~l~-~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d 148 (337)
...++++++++. +++ +.. + .|.+|+..+.. .......+. ..+.++++++ +++++++.. +
T Consensus 25 ~p~~i~~~~~g~---------l~v~~~~~~~~i~~~~~~~~~--~~~~~~~~~-----~~p~~i~~~~-~g~l~v~~~-~ 86 (270)
T 1rwi_B 25 SPSGVAVDSAGN---------VYVTSEGMYGRVVKLATGSTG--TTVLPFNGL-----YQPQGLAVDG-AGTVYVTDF-N 86 (270)
T ss_dssp CEEEEEECTTCC---------EEEEECSSSCEEEEECC-------EECCCCSC-----CSCCCEEECT-TCCEEEEET-T
T ss_pred CccceEECCCCC---------EEEEccCCCCcEEEecCCCcc--cceEeeCCc-----CCcceeEECC-CCCEEEEcC-C
Confidence 678999999998 777 534 4 89999876653 111111111 4577899998 888666665 8
Q ss_pred CcEEEEeCCCccchhhhhccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCc
Q 038533 149 TTCTIWDIEKGVVETQLIAHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLR 227 (337)
Q Consensus 149 g~i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 227 (337)
+.|.+||................+..++++ +++++++...++.|.+||..+...... .. ........+++++ +++
T Consensus 87 ~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~--~~-~~~~~p~~i~~~~-~g~ 162 (270)
T 1rwi_B 87 NRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVL--PF-TGLNDPDGVAVDN-SGN 162 (270)
T ss_dssp TEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEEC--CC-CSCCSCCCEEECT-TCC
T ss_pred CEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEee--cc-ccCCCceeEEEeC-CCC
Confidence 899999987654322111223568899999 677777777788999998665442221 11 1224678899998 787
Q ss_pred EEEEEEecCCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeC
Q 038533 228 YMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSA 307 (337)
Q Consensus 228 ~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~ 307 (337)
++++...++. |.+||.... ........+...+..++++++|. ++++...++.|.+|+.. .... ......+
T Consensus 163 l~v~~~~~~~-i~~~~~~~~-~~~~~~~~~~~~p~~i~~d~~g~-l~v~~~~~~~v~~~~~~--~~~~-----~~~~~~~ 232 (270)
T 1rwi_B 163 VYVTDTDNNR-VVKLEAESN-NQVVLPFTDITAPWGIAVDEAGT-VYVTEHNTNQVVKLLAG--STTS-----TVLPFTG 232 (270)
T ss_dssp EEEEEGGGTE-EEEECTTTC-CEEECCCSSCCSEEEEEECTTCC-EEEEETTTSCEEEECTT--CSCC-----EECCCCS
T ss_pred EEEEECCCCE-EEEEecCCC-ceEeecccCCCCceEEEECCCCC-EEEEECCCCcEEEEcCC--CCcc-----eeeccCC
Confidence 6665555566 999998763 22222222335678999999997 88888888999999987 3111 1111123
Q ss_pred CCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 308 GSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 308 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
...+.+++++|+|..+++...++.|+++++
T Consensus 233 ~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~ 262 (270)
T 1rwi_B 233 LNTPLAVAVDSDRTVYVADRGNDRVVKLTS 262 (270)
T ss_dssp CSCEEEEEECTTCCEEEEEGGGTEEEEECC
T ss_pred CCCceeEEECCCCCEEEEECCCCEEEEEcC
Confidence 356899999999986666678999999874
No 178
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.71 E-value=3.6e-16 Score=133.99 Aligned_cols=233 Identities=8% Similarity=-0.038 Sum_probs=147.6
Q ss_pred CCCeEEEecCCCCcccCcCCccEEEEe-C---C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEe
Q 038533 71 YPPTKLMFDPNSSSRKSSSNRHLLASS-G---D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTC 145 (337)
Q Consensus 71 ~~i~~i~~~~~~~~~~~~~~~~~l~~~-~---~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 145 (337)
..+..++|+|+++ .|+.. . + .|.+||+.+++ ......++. .....+.|+| +++.|+.+
T Consensus 36 ~~~~~~~~SpdG~---------~l~~~~~~~g~~~l~~~d~~~~~--~~~l~~~~~-----~~~~~~~~sp-dg~~l~~~ 98 (396)
T 3c5m_A 36 NYFYQKCFTQDGK---------KLLFAGDFDGNRNYYLLNLETQQ--AVQLTEGKG-----DNTFGGFIST-DERAFFYV 98 (396)
T ss_dssp CCTTSCCBCTTSC---------EEEEEECTTSSCEEEEEETTTTE--EEECCCSSC-----BCTTTCEECT-TSSEEEEE
T ss_pred eeeecCcCCCCCC---------EEEEEEecCCCceEEEEECCCCc--EEEeecCCC-----CccccceECC-CCCEEEEE
Confidence 3478899999998 65544 2 2 78889998873 333222221 2233478999 99999999
Q ss_pred eCCCcEEEEeCCCccchhhhhccCCceeE-------------------EEeC-CCcEEEEE-----cCCCeEEEEECCCC
Q 038533 146 SIDTTCTIWDIEKGVVETQLIAHDKEVYD-------------------ICWG-EARVFASV-----SADGSVRIFDLRDK 200 (337)
Q Consensus 146 ~~dg~i~v~d~~~~~~~~~~~~~~~~v~~-------------------~~~~-~~~~l~~~-----~~dg~i~iwd~~~~ 200 (337)
+.++.|++||+.+++.......+...... +.|+ +++.++.+ ..+..|.+||+.++
T Consensus 99 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g 178 (396)
T 3c5m_A 99 KNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETG 178 (396)
T ss_dssp ETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTC
T ss_pred EcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCC
Confidence 99999999999887754443333332222 2344 34444433 35678999999887
Q ss_pred CCceeeecCCCCCCCceEEEeecCCCcEEEEEEecC-----CEEEEEECCCCCCCeEEeecc--cceeeEEEeCCCCCCe
Q 038533 201 EHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS-----NKVVILDIRSPTLPVAELERH--RACVNAIAWAPQSRRH 273 (337)
Q Consensus 201 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~-----~~i~i~d~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~ 273 (337)
+...... +...+..+.|+|.++..|+..+.++ ..|.+||+.. .. ...+..+ ...+..++|+|+|+ .
T Consensus 179 ~~~~~~~----~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~-~~-~~~l~~~~~~~~~~~~~~spdg~-~ 251 (396)
T 3c5m_A 179 ELEVIHQ----DTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDG-SN-VRKIKEHAEGESCTHEFWIPDGS-A 251 (396)
T ss_dssp CEEEEEE----ESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTS-CC-CEESSCCCTTEEEEEEEECTTSS-C
T ss_pred cEEeecc----CCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCC-Cc-eeEeeccCCCccccceEECCCCC-E
Confidence 7443332 3467889999984566666655432 2389999865 33 2333333 23678899999999 6
Q ss_pred EEEEcCC-----CcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEcc-CCCceEEEE----------------cCCc
Q 038533 274 ICSVGDD-----SQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSP-AQPDWLAIA----------------FSNK 331 (337)
Q Consensus 274 l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~----------------~d~~ 331 (337)
|+.++.+ +.|++||+..+. ...+..... .. +.|+| +++.++.++ .+..
T Consensus 252 l~~~~~~~~~~~~~l~~~d~~~g~--------~~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~ 321 (396)
T 3c5m_A 252 MAYVSYFKGQTDRVIYKANPETLE--------NEEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPF 321 (396)
T ss_dssp EEEEEEETTTCCEEEEEECTTTCC--------EEEEEECCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCE
T ss_pred EEEEecCCCCccceEEEEECCCCC--------eEEeeeCCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCc
Confidence 6555433 349999987222 222222222 33 89999 998666644 2467
Q ss_pred EEEEeC
Q 038533 332 MQLLKV 337 (337)
Q Consensus 332 i~iw~l 337 (337)
|.+|++
T Consensus 322 i~~~d~ 327 (396)
T 3c5m_A 322 LYVLNT 327 (396)
T ss_dssp EEEEET
T ss_pred EEEEec
Confidence 888874
No 179
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.70 E-value=3e-14 Score=115.45 Aligned_cols=233 Identities=11% Similarity=0.031 Sum_probs=158.2
Q ss_pred ceeEEEEe--cceEEEe-eeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeCC
Q 038533 23 PLYAMAVC--GQRIAVG-SFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSGD 99 (337)
Q Consensus 23 ~v~~~~~s--~~~la~g-~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~~ 99 (337)
...+++++ +++++++ .. ++.|.+|+......... ...+...+.++++.+++. ++++..+
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~----~~~i~~~~~~~~~~~~~-----~~~~~~~p~~i~~~~~g~---------l~v~~~~ 86 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGM----YGRVVKLATGSTGTTVL-----PFNGLYQPQGLAVDGAGT---------VYVTDFN 86 (270)
T ss_dssp CEEEEEECTTCCEEEEECSS----SCEEEEECC-----EEC-----CCCSCCSCCCEEECTTCC---------EEEEETT
T ss_pred CccceEECCCCCEEEEccCC----CCcEEEecCCCcccceE-----eeCCcCCcceeEECCCCC---------EEEEcCC
Confidence 78899998 6655514 43 78888876543322211 123345688999999988 7777656
Q ss_pred -eEEEEecCCCCccceeeec-CCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCceeEEEe
Q 038533 100 -FLRLWDVGDSSIEPVAVLN-NSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICW 177 (337)
Q Consensus 100 -~v~vw~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~ 177 (337)
.|.+||..+... ..+. ... ..+.++++++ +++++++...++.|.+|+..+.............+.++++
T Consensus 87 ~~i~~~d~~~~~~---~~~~~~~~-----~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~ 157 (270)
T 1rwi_B 87 NRVVTLAAGSNNQ---TVLPFDGL-----NYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAV 157 (270)
T ss_dssp TEEEEECTTCSCC---EECCCCSC-----SSEEEEEECT-TCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEE
T ss_pred CEEEEEeCCCceE---eeeecCCc-----CCCcceEECC-CCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEE
Confidence 999999877632 2221 111 4688999998 8888888777889999986554432222223346788999
Q ss_pred C-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeec
Q 038533 178 G-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELER 256 (337)
Q Consensus 178 ~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~ 256 (337)
+ +++++++...++.|.+||........... ........+++++ ++.++++...++. |.+||... .........
T Consensus 158 ~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~---~~~~~p~~i~~d~-~g~l~v~~~~~~~-v~~~~~~~-~~~~~~~~~ 231 (270)
T 1rwi_B 158 DNSGNVYVTDTDNNRVVKLEAESNNQVVLPF---TDITAPWGIAVDE-AGTVYVTEHNTNQ-VVKLLAGS-TTSTVLPFT 231 (270)
T ss_dssp CTTCCEEEEEGGGTEEEEECTTTCCEEECCC---SSCCSEEEEEECT-TCCEEEEETTTSC-EEEECTTC-SCCEECCCC
T ss_pred eCCCCEEEEECCCCEEEEEecCCCceEeecc---cCCCCceEEEECC-CCCEEEEECCCCc-EEEEcCCC-CcceeeccC
Confidence 9 67777777778899999987765322111 1225678999998 7766665555666 99999875 322222222
Q ss_pred ccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCC
Q 038533 257 HRACVNAIAWAPQSRRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 257 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 289 (337)
+...+.+++++|+|. ++++...++.|+++++.
T Consensus 232 ~~~~p~~i~~~~~g~-l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 232 GLNTPLAVAVDSDRT-VYVADRGNDRVVKLTSL 263 (270)
T ss_dssp SCSCEEEEEECTTCC-EEEEEGGGTEEEEECCC
T ss_pred CCCCceeEEECCCCC-EEEEECCCCEEEEEcCC
Confidence 335689999999998 99999999999999998
No 180
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.70 E-value=1.2e-14 Score=119.67 Aligned_cols=229 Identities=8% Similarity=-0.034 Sum_probs=154.4
Q ss_pred CCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEe
Q 038533 68 DHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTC 145 (337)
Q Consensus 68 ~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 145 (337)
.+.....+++|+|++. .+++++. + .|..|+..++ ...+..+. ..+.++++++ +++++++.
T Consensus 25 ~~~~~~eg~~~d~~g~--------~l~~~~~~~~~i~~~~~~~~----~~~~~~~~-----~~~~~l~~~~-dg~l~v~~ 86 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARS--------AVIFSDVRQNRTWAWSDDGQ----LSPEMHPS-----HHQNGHCLNK-QGHLIACS 86 (296)
T ss_dssp CCCSSEEEEEEEGGGT--------EEEEEEGGGTEEEEEETTSC----EEEEESSC-----SSEEEEEECT-TCCEEEEE
T ss_pred cCCccccCCeEeCCCC--------EEEEEeCCCCEEEEEECCCC----eEEEECCC-----CCcceeeECC-CCcEEEEe
Confidence 3445567899999986 4666666 3 9999998876 23344444 6789999998 88888887
Q ss_pred eCCCcEEEEeCCCccchhhhhc----cCCceeEEEeC-CCcEEEEE----c-------------CCCeEEEEECCCCCCc
Q 038533 146 SIDTTCTIWDIEKGVVETQLIA----HDKEVYDICWG-EARVFASV----S-------------ADGSVRIFDLRDKEHS 203 (337)
Q Consensus 146 ~~dg~i~v~d~~~~~~~~~~~~----~~~~v~~~~~~-~~~~l~~~----~-------------~dg~i~iwd~~~~~~~ 203 (337)
..++.|.+||..+++....... ....+.+++++ +++++++. + ..+.|..+|.. ++ .
T Consensus 87 ~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~ 164 (296)
T 3e5z_A 87 HGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-L 164 (296)
T ss_dssp TTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-E
T ss_pred cCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-E
Confidence 7778999999977764332221 12346789999 67777763 2 13456666654 33 2
Q ss_pred eeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCC---eEEeecccceeeEEEeCCCCCCeEEEEcCC
Q 038533 204 TIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLP---VAELERHRACVNAIAWAPQSRRHICSVGDD 280 (337)
Q Consensus 204 ~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 280 (337)
.... .+......++|+| +++.+++.+.++. |++||+...+.. ...+..+...+..++++++|. ++++. +
T Consensus 165 ~~~~---~~~~~~~gi~~s~-dg~~lv~~~~~~~-i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~--~ 236 (296)
T 3e5z_A 165 SAPI---RDRVKPNGLAFLP-SGNLLVSDTGDNA-THRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGL-IWASA--G 236 (296)
T ss_dssp EEEE---CCCSSEEEEEECT-TSCEEEEETTTTE-EEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSC-EEEEE--T
T ss_pred EEee---cCCCCCccEEECC-CCCEEEEeCCCCe-EEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCC-EEEEc--C
Confidence 2222 1335668999999 8888855555555 999999732433 223333445678899999998 66665 7
Q ss_pred CcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEE-ccCCCceEEEEcCCcEE
Q 038533 281 SQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQW-SPAQPDWLAIAFSNKMQ 333 (337)
Q Consensus 281 g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~d~~i~ 333 (337)
+.|.+|+.. . .....+..+.. +.+++| .|+++.|++++.++..+
T Consensus 237 ~~v~~~~~~--g------~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~ 281 (296)
T 3e5z_A 237 DGVHVLTPD--G------DELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWS 281 (296)
T ss_dssp TEEEEECTT--S------CEEEEEECSSC-CCEEEEESTTSCEEEEEETTEEEE
T ss_pred CeEEEECCC--C------CEEEEEECCCC-ceeEEEECCCCCEEEEEcCCeEEE
Confidence 889999986 2 22334444555 899999 58888888888765433
No 181
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.70 E-value=2.4e-14 Score=132.11 Aligned_cols=275 Identities=9% Similarity=-0.012 Sum_probs=173.8
Q ss_pred cceEEEeeeeccCcceEEEEEecCCCccee--cC-CCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-----C--e
Q 038533 31 GQRIAVGSFIEDYTNRVDVVSFEPESLSIK--TH-PSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-----D--F 100 (337)
Q Consensus 31 ~~~la~g~~~~~~d~~i~i~~~~~~~~~~~--~~-~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-----~--~ 100 (337)
|++++......+ ...-.||..+....... .. ..+..+|...+..++||||++ +||.+. + .
T Consensus 83 G~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~---------~la~~~~~~G~~~~~ 152 (710)
T 2xdw_A 83 GKRYFYFYNTGL-QNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGE---------YFAYGLSASGSDWVT 152 (710)
T ss_dssp TTEEEEEEECSS-CSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSS---------EEEEEEEETTCSCEE
T ss_pred CCEEEEEEEcCC-ceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCC---------EEEEEEcCCCCceEE
Confidence 777776654111 12225565654332221 10 112234555688999999999 777542 2 8
Q ss_pred EEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCc----------------EEEEeCCCccch--
Q 038533 101 LRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTT----------------CTIWDIEKGVVE-- 162 (337)
Q Consensus 101 v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~----------------i~v~d~~~~~~~-- 162 (337)
|++||+.+++ .......+ ..+..++|+| +++.|+.++.++. |++|++.+++..
T Consensus 153 i~v~d~~tg~--~~~~~~~~------~~~~~~~wsp-Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~ 223 (710)
T 2xdw_A 153 IKFMKVDGAK--ELPDVLER------VKFSCMAWTH-DGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDI 223 (710)
T ss_dssp EEEEETTTTE--EEEEEEEE------ECSCCEEECT-TSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCE
T ss_pred EEEEECCCCC--CCcccccC------cccceEEEEe-CCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccce
Confidence 9999999984 33222111 3366899999 9999999887766 999999887632
Q ss_pred h--hhhccCCceeEEEeC-CCcEEEEEcC-----CCeEEEEECCC------CC-CceeeecCCCCCCCceEEEeecCCCc
Q 038533 163 T--QLIAHDKEVYDICWG-EARVFASVSA-----DGSVRIFDLRD------KE-HSTIIYESPQPDTPLLRLAWNKQDLR 227 (337)
Q Consensus 163 ~--~~~~~~~~v~~~~~~-~~~~l~~~~~-----dg~i~iwd~~~------~~-~~~~~~~~~~~~~~i~~~~~~~~~~~ 227 (337)
. ....+...+..+.|+ ++++|+..+. +..|.+||+.+ +. ....+.. +...+.. .|+| ++.
T Consensus 224 ~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~---~~~~~~~-~~s~-dg~ 298 (710)
T 2xdw_A 224 LCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLID---NFEGEYD-YVTN-EGT 298 (710)
T ss_dssp EEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEEC---SSSSCEE-EEEE-ETT
T ss_pred EEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeC---CCCcEEE-EEec-cCC
Confidence 1 222345567899999 7888887664 56899999986 42 2333322 2233443 4788 777
Q ss_pred EEEEEEecC---CEEEEEECCCCCC-CeEEeecccc--eeeEEEeCCCCCCeEEEEcCCCc--EEEEeCCCCCCCCCCCC
Q 038533 228 YMATILMDS---NKVVILDIRSPTL-PVAELERHRA--CVNAIAWAPQSRRHICSVGDDSQ--AFIWELPLPPVAGPNGI 299 (337)
Q Consensus 228 ~l~~~~~d~---~~i~i~d~~~~~~-~~~~~~~~~~--~v~~~~~~~~~~~~l~~~~~dg~--i~iw~~~~~~~~~~~~~ 299 (337)
.|+..+..+ ..|.+||+.+... ....+..|.. .+..+.|++++. ++++...|+. |.+|++. + +.
T Consensus 299 ~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-lv~~~~~~g~~~l~~~~~~--~-----g~ 370 (710)
T 2xdw_A 299 VFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNF-LVLCYLHDVKNTLQLHDLA--T-----GA 370 (710)
T ss_dssp EEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTE-EEEEEEETTEEEEEEEETT--T-----CC
T ss_pred EEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCE-EEEEEEECCEEEEEEEECC--C-----CC
Confidence 777666532 2499999987431 2345544544 688899997776 8888888885 4555653 2 11
Q ss_pred CceeeeeCCCceeEEEEccCCCceEEEE----cCCcEEEEeC
Q 038533 300 DPMSMYSAGSEINQLQWSPAQPDWLAIA----FSNKMQLLKV 337 (337)
Q Consensus 300 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~d~~i~iw~l 337 (337)
....+..+...+..++++|+++.++... ..+.+.+|++
T Consensus 371 ~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 412 (710)
T 2xdw_A 371 LLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDL 412 (710)
T ss_dssp EEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEET
T ss_pred EEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEEC
Confidence 1233444567789999999987666432 2367887764
No 182
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.70 E-value=6.2e-15 Score=124.69 Aligned_cols=259 Identities=12% Similarity=0.075 Sum_probs=161.0
Q ss_pred cceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-----------C-eEEEEecCCCCc
Q 038533 44 TNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-----------D-FLRLWDVGDSSI 111 (337)
Q Consensus 44 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-----------~-~v~vw~~~~~~~ 111 (337)
|+.|.+||......... + ..+..+ .++|+|+++ +++++. + .|.+||..+.
T Consensus 30 d~~v~v~D~~t~~~~~~----i-~~g~~p--~i~~spdg~---------~lyv~~~~~~~~~~g~~~~~v~v~d~~t~-- 91 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLGM----V-PTAFNG--HVQVSNDGK---------KIYTMTTYHERITRGKRSDVVEVWDADKL-- 91 (361)
T ss_dssp GCEEEEEETTTCCEEEE----E-ECCEEE--EEEECTTSS---------EEEEEEEEETTSSSSCEEEEEEEEETTTC--
T ss_pred cCeEEEEECCCCeEEEE----e-cCCCCC--ceEECCCCC---------EEEEEEecccccccCCCCCEEEEEECcCC--
Confidence 77899987654432221 2 223334 899999998 666542 3 7999999887
Q ss_pred cceeeecCCCCC-cccCCeeEEEeecCCCCeEEEeeC--CCcEEEEeCCCccchhh-hhccCCceeEEEeC--CCcEEEE
Q 038533 112 EPVAVLNNSKSS-EFCAPLTSFDWNEIEPKRIGTCSI--DTTCTIWDIEKGVVETQ-LIAHDKEVYDICWG--EARVFAS 185 (337)
Q Consensus 112 ~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~~~~~--dg~i~v~d~~~~~~~~~-~~~~~~~v~~~~~~--~~~~l~~ 185 (337)
+....+...... ........++++| ++++|+++.. ++.|.+||+.+++.+.. +.. ... ..+.+. ....+++
T Consensus 92 ~~~~~i~~~~~~~~~g~~p~~i~~sp-dg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-~~~-~~v~~~p~~~~~~~~ 168 (361)
T 2oiz_A 92 TFEKEISLPPKRVQGLNYDGLFRQTT-DGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA-AGC-WSVIPQPNRPRSFMT 168 (361)
T ss_dssp CEEEEEEECTTBCCBCCCGGGEEECT-TSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG-TTE-EEEEECTTSSSEEEE
T ss_pred cEEEEEEcCccccccCCCcceEEECC-CCCEEEEECCCCCCeEEEEECCCCcEEEEEecC-CCc-ceeEEcCCCCeeEEE
Confidence 444444321100 0013466899999 9999988864 58999999999987766 542 222 223444 2467888
Q ss_pred EcCCCeEEEEECCCCCCce-eee---cCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCe-EEeec----
Q 038533 186 VSADGSVRIFDLRDKEHST-IIY---ESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPV-AELER---- 256 (337)
Q Consensus 186 ~~~dg~i~iwd~~~~~~~~-~~~---~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~-~~~~~---- 256 (337)
.+.||.+.+|++....... ... .......+ ..+.++| ++..++..+.++. +.++|+......+ ..+..
T Consensus 169 ~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~-~g~~~~~~~~~~~-v~v~d~~~~~~~~~~~~~~~~~~ 245 (361)
T 2oiz_A 169 ICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDP-IFIAPAL-DKDKAHFVSYYGN-VYSADFSGDEVKVDGPWSLLNDE 245 (361)
T ss_dssp EETTSSEEEEEECTTSSEEEEEECCCCSCTTTSC-BCSCCEE-CSSEEEEEBTTSE-EEEEECSSSSCEEEEEEESCCHH
T ss_pred ECCCCcEEEEEECCCCcEeeeccccceEcCCCCc-eEEEecc-cCCEEEEEeCCCe-EEEEEecCCCceecccccccCcc
Confidence 8999999999987533222 111 00011122 2334456 6667777777776 9999997533211 11110
Q ss_pred --c----cceeeEEEeCCCCCCeEEEEcC-----------CCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccC
Q 038533 257 --H----RACVNAIAWAPQSRRHICSVGD-----------DSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPA 319 (337)
Q Consensus 257 --~----~~~v~~~~~~~~~~~~l~~~~~-----------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 319 (337)
+ ......++|+|+++ .++++.. .+.|.+||+. +. +....+..+. +.+++|+|+
T Consensus 246 ~~~~~~~p~g~~~~a~~~dg~-~lyv~~~~~~~~~~~~~~~~~v~viD~~--t~-----~~v~~i~~~~--p~~ia~spd 315 (361)
T 2oiz_A 246 DKAKNWVPGGYNLVGLHRASG-RMYVFMHPDGKEGTHKFPAAEIWVMDTK--TK-----QRVARIPGRD--ALSMTIDQQ 315 (361)
T ss_dssp HHHTTCEECCSSCEEEETTTT-EEEEEEESSCCTTCTTCCCSEEEEEETT--TT-----EEEEEEECTT--CCEEEEETT
T ss_pred ccccccccCCeeEEEEecCCC-eEEEEEccCCCcccccCCCceEEEEECC--CC-----cEEEEEecCC--eeEEEECCC
Confidence 0 01122378999988 5554432 3479999998 31 1122344444 999999999
Q ss_pred CCceEEEEcCCcEEEEeC
Q 038533 320 QPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 320 ~~~l~~~~~d~~i~iw~l 337 (337)
|+.|++++. +.|.+||+
T Consensus 316 g~~l~v~n~-~~v~v~D~ 332 (361)
T 2oiz_A 316 RNLMLTLDG-GNVNVYDI 332 (361)
T ss_dssp TTEEEEECS-SCEEEEEC
T ss_pred CCEEEEeCC-CeEEEEEC
Confidence 998887776 99999984
No 183
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.70 E-value=1.8e-14 Score=120.29 Aligned_cols=257 Identities=6% Similarity=-0.045 Sum_probs=167.1
Q ss_pred cceEEEEEecCCCcceecCCC--c-CCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeec
Q 038533 44 TNRVDVVSFEPESLSIKTHPS--L-SFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLN 118 (337)
Q Consensus 44 d~~i~i~~~~~~~~~~~~~~~--~-~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~ 118 (337)
++.|.++|.+... +..... . ..........+.+.. +. ++++.. + .|.+||..++ +.+..+.
T Consensus 16 ~~~l~~~d~~t~~--~~~~i~~~~n~~~lg~~~~~i~~~~-~~---------lyv~~~~~~~v~viD~~t~--~~~~~i~ 81 (328)
T 3dsm_A 16 NATLSYYDPATCE--VENEVFYRANGFKLGDVAQSMVIRD-GI---------GWIVVNNSHVIFAIDINTF--KEVGRIT 81 (328)
T ss_dssp CBEEEEEETTTTE--EECSHHHHHHSSCCBSCEEEEEEET-TE---------EEEEEGGGTEEEEEETTTC--CEEEEEE
T ss_pred CceEEEEECCCCE--EhhhhHhhhcCcccCccceEEEEEC-CE---------EEEEEcCCCEEEEEECccc--EEEEEcC
Confidence 7899997765433 221000 0 012234457787753 33 555554 3 9999999998 4555554
Q ss_pred CCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccC-----CceeEEEeCCCcEEEEEc--CCCe
Q 038533 119 NSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHD-----KEVYDICWGEARVFASVS--ADGS 191 (337)
Q Consensus 119 ~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~-----~~v~~~~~~~~~~l~~~~--~dg~ 191 (337)
.. .....+++++ ++..+++...++.|.+||..+++....+.... .....+++. ++.++++. .++.
T Consensus 82 ~~------~~p~~i~~~~-~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~-~~~lyv~~~~~~~~ 153 (328)
T 3dsm_A 82 GF------TSPRYIHFLS-DEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQY-GKYVYVNCWSYQNR 153 (328)
T ss_dssp CC------SSEEEEEEEE-TTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEE-TTEEEEEECTTCCE
T ss_pred CC------CCCcEEEEeC-CCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEE-CCEEEEEcCCCCCE
Confidence 32 5678999988 77555555478999999999988665554322 145667774 44444444 4889
Q ss_pred EEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEec----------CCEEEEEECCCCCCCeEEeecc-cce
Q 038533 192 VRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMD----------SNKVVILDIRSPTLPVAELERH-RAC 260 (337)
Q Consensus 192 i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d----------~~~i~i~d~~~~~~~~~~~~~~-~~~ 260 (337)
|.++|+.+.+....+... .....+.++| ++++++++..+ +. |.++|..+ .+....+... ...
T Consensus 154 v~viD~~t~~~~~~i~~g----~~p~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~~-v~~id~~t-~~v~~~~~~~~g~~ 226 (328)
T 3dsm_A 154 ILKIDTETDKVVDELTIG----IQPTSLVMDK-YNKMWTITDGGYEGSPYGYEAPS-LYRIDAET-FTVEKQFKFKLGDW 226 (328)
T ss_dssp EEEEETTTTEEEEEEECS----SCBCCCEECT-TSEEEEEBCCBCTTCSSCBCCCE-EEEEETTT-TEEEEEEECCTTCC
T ss_pred EEEEECCCCeEEEEEEcC----CCccceEEcC-CCCEEEEECCCccCCccccCCce-EEEEECCC-CeEEEEEecCCCCC
Confidence 999999988755554432 3456788998 88877766554 45 99999987 4444454422 236
Q ss_pred eeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEE-----cCCcEEEE
Q 038533 261 VNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIA-----FSNKMQLL 335 (337)
Q Consensus 261 v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----~d~~i~iw 335 (337)
+..++|+|+++ .|+++.. .|.+||....+... .............++++|++..++.+. .++.|.+|
T Consensus 227 p~~la~~~d~~-~lyv~~~--~v~~~d~~t~~~~~-----~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~ 298 (328)
T 3dsm_A 227 PSEVQLNGTRD-TLYWINN--DIWRMPVEADRVPV-----RPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRY 298 (328)
T ss_dssp CEEEEECTTSC-EEEEESS--SEEEEETTCSSCCS-----SCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEE
T ss_pred ceeEEEecCCC-EEEEEcc--EEEEEECCCCceee-----eeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEE
Confidence 78999999998 7777654 89999998333211 011111245689999999555565554 57889998
Q ss_pred eC
Q 038533 336 KV 337 (337)
Q Consensus 336 ~l 337 (337)
+.
T Consensus 299 d~ 300 (328)
T 3dsm_A 299 SP 300 (328)
T ss_dssp CT
T ss_pred CC
Confidence 73
No 184
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.70 E-value=1.4e-13 Score=113.07 Aligned_cols=270 Identities=10% Similarity=0.063 Sum_probs=175.6
Q ss_pred CceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-
Q 038533 22 YPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG- 98 (337)
Q Consensus 22 ~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~- 98 (337)
..+.+++++ ++++++... ++.|.+|+.+ . .+... . .......+.++++.+++. ++++..
T Consensus 15 ~~~~~i~~d~~g~l~v~~~~----~~~v~~~d~~-~--~~~~~-~-~~~~~~~~~~i~~~~~g~---------l~v~~~~ 76 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWITQHK----ANMISCINLD-G--KITEY-P-LPTPDAKVMCLTISSDGE---------VWFTENA 76 (299)
T ss_dssp CCEEEEEECTTSCEEEEETT----TTEEEEECTT-C--CEEEE-E-CSSTTCCEEEEEECTTSC---------EEEEETT
T ss_pred CCccceEECCCCCEEEEecC----CCcEEEEcCC-C--CeEEe-c-CCcccCceeeEEECCCCC---------EEEeCCC
Confidence 578999999 555544332 6788887665 2 22210 0 122446789999999998 777765
Q ss_pred C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchh-hhhccCCceeEEE
Q 038533 99 D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVET-QLIAHDKEVYDIC 176 (337)
Q Consensus 99 ~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~-~~~~~~~~v~~~~ 176 (337)
+ .|..|+.. ++. ....+.... ..+.++++.+ ++.++++...++.|.+||. +++... ........+..++
T Consensus 77 ~~~i~~~~~~-g~~-~~~~~~~~~-----~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~ 147 (299)
T 2z2n_A 77 ANKIGRITKK-GII-KEYTLPNPD-----SAPYGITEGP-NGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFIT 147 (299)
T ss_dssp TTEEEEECTT-SCE-EEEECSSTT-----CCEEEEEECT-TSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEE
T ss_pred CCeEEEECCC-CcE-EEEeCCCcC-----CCceeeEECC-CCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEE
Confidence 4 89999976 322 111222222 5688999998 8888888777889999998 554322 1222345688999
Q ss_pred eC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEe-
Q 038533 177 WG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAEL- 254 (337)
Q Consensus 177 ~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~- 254 (337)
++ +++++++...++.|..||. +++.... ........+..+++++ ++.+.++...++. |.+||. + +. +..+
T Consensus 148 ~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~--~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~-i~~~~~-~-g~-~~~~~ 219 (299)
T 2z2n_A 148 LGSDNALWFTENQNNAIGRITE-SGDITEF--KIPTPASGPVGITKGN-DDALWFVEIIGNK-IGRITT-S-GE-ITEFK 219 (299)
T ss_dssp ECTTSCEEEEETTTTEEEEECT-TCCEEEE--ECSSTTCCEEEEEECT-TSSEEEEETTTTE-EEEECT-T-CC-EEEEE
T ss_pred EcCCCCEEEEeCCCCEEEEEcC-CCcEEEe--eCCCCCCcceeEEECC-CCCEEEEccCCce-EEEECC-C-Cc-EEEEE
Confidence 99 6777777777889999998 5543222 1112345678999998 7776555444555 999998 4 33 2222
Q ss_pred -ecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEcCCcEE
Q 038533 255 -ERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQ 333 (337)
Q Consensus 255 -~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 333 (337)
..+...+.+++++++|. ++++...++.|..||.. .. ........+...+.++++ +++..+++.. .+.+.
T Consensus 220 ~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~~--g~-----~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~ 289 (299)
T 2z2n_A 220 IPTPNARPHAITAGAGID-LWFTEWGANKIGRLTSN--NI-----IEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIG 289 (299)
T ss_dssp CSSTTCCEEEEEECSTTC-EEEEETTTTEEEEEETT--TE-----EEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEE
T ss_pred CCCCCCCceeEEECCCCC-EEEeccCCceEEEECCC--Cc-----eEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEE
Confidence 23446788999999998 77777678899999985 20 001112234467899999 8886555544 45554
Q ss_pred EEe
Q 038533 334 LLK 336 (337)
Q Consensus 334 iw~ 336 (337)
.++
T Consensus 290 ~~~ 292 (299)
T 2z2n_A 290 KLT 292 (299)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 185
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.69 E-value=4.6e-15 Score=136.48 Aligned_cols=275 Identities=11% Similarity=0.017 Sum_probs=171.4
Q ss_pred ecceEEEeeeeccCcceEEEEEecCCCcceec---CCCcCCCCCCCCeEEEecCCCCcccCcCCccEEE-----EeCC--
Q 038533 30 CGQRIAVGSFIEDYTNRVDVVSFEPESLSIKT---HPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLA-----SSGD-- 99 (337)
Q Consensus 30 s~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~---~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~-----~~~~-- 99 (337)
.|++++......+ ...-.||..+........ ...+..+|...+..++||||++ +|| .|++
T Consensus 78 dG~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~---------~la~~~~~~G~~~~ 147 (695)
T 2bkl_A 78 RNGRFFYVRTHKD-KEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGK---------KVAFAQKPNAADEA 147 (695)
T ss_dssp ETTEEEEEEECTT-CSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSS---------EEEEEEEETTCSCC
T ss_pred ECCEEEEEEEcCC-CeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCC---------EEEEEECCCCCceE
Confidence 3788877765111 114566666543322221 0112235666789999999999 777 3443
Q ss_pred eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCc-------------EEEEeCCCccc----h
Q 038533 100 FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTT-------------CTIWDIEKGVV----E 162 (337)
Q Consensus 100 ~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~-------------i~v~d~~~~~~----~ 162 (337)
.|++||+.+++......+.. .....++|+| +++.|+.++.|.. |++|++.+++. +
T Consensus 148 ~i~v~dl~tg~~~~~~~~~~-------~~~~~~~wsp-Dg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv 219 (695)
T 2bkl_A 148 VLHVIDVDSGEWSKVDVIEG-------GKYATPKWTP-DSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVV 219 (695)
T ss_dssp EEEEEETTTCCBCSSCCBSC-------CTTCCCEECT-TSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEE
T ss_pred EEEEEECCCCCCcCCcccCc-------ccccceEEec-CCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEE
Confidence 89999999985320111211 1126799999 9999999988776 99999988763 2
Q ss_pred hhhhccCCceeEEEeC-CCcEEEEEcCCC----eEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEe-c-
Q 038533 163 TQLIAHDKEVYDICWG-EARVFASVSADG----SVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILM-D- 235 (337)
Q Consensus 163 ~~~~~~~~~v~~~~~~-~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-d- 235 (337)
.....+...+..+.|+ ++++|+.++.++ .|.+||..+++.... .. +........+ + ++. ++..+. +
T Consensus 220 ~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l-~~---~~~~~~~~~~-~-~g~-l~~~s~~~~ 292 (695)
T 2bkl_A 220 HERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLL-VK---GVGAKYEVHA-W-KDR-FYVLTDEGA 292 (695)
T ss_dssp ECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEE-EE---CSSCCEEEEE-E-TTE-EEEEECTTC
T ss_pred EecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEe-ec---CCCceEEEEe-c-CCc-EEEEECCCC
Confidence 2333455678899999 788888777665 677776655543322 22 2234556666 4 555 544443 2
Q ss_pred -CCEEEEEECCCCCC-CeEEeecc--cceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeC-CCc
Q 038533 236 -SNKVVILDIRSPTL-PVAELERH--RACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSA-GSE 310 (337)
Q Consensus 236 -~~~i~i~d~~~~~~-~~~~~~~~--~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~-~~~ 310 (337)
...|.+||+.+... ....+..+ ...+..++|+ ++. ++++...|+..++|.++... .....+..+ ...
T Consensus 293 ~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~-lv~~~~~dg~~~l~~~~~~g------~~~~~l~~~~~~~ 364 (695)
T 2bkl_A 293 PRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGH-LSLEYLKDATSEVRVATLKG------KPVRTVQLPGVGA 364 (695)
T ss_dssp TTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTE-EEEEEEETTEEEEEEEETTC------CEEEECCCSSSSE
T ss_pred CCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCE-EEEEEEECCEEEEEEEeCCC------CeeEEecCCCCeE
Confidence 23499999976331 12333333 4567888888 555 88999999998888776211 112222223 566
Q ss_pred eeEEEEccCCCceEEEE----cCCcEEEEeC
Q 038533 311 INQLQWSPAQPDWLAIA----FSNKMQLLKV 337 (337)
Q Consensus 311 v~~~~~~~~~~~l~~~~----~d~~i~iw~l 337 (337)
+..++++|+++.++... ..+.|.+|++
T Consensus 365 v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~ 395 (695)
T 2bkl_A 365 ASNLMGLEDLDDAYYVFTSFTTPRQIYKTSV 395 (695)
T ss_dssp ECCCBSCTTCSEEEEEEEETTEEEEEEEEET
T ss_pred EEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 88889999987666433 2467888874
No 186
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.68 E-value=1.1e-14 Score=121.97 Aligned_cols=239 Identities=10% Similarity=0.065 Sum_probs=159.2
Q ss_pred CCCeEEEecCCCCcccCcCCccEEEEe-CC-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCC
Q 038533 71 YPPTKLMFDPNSSSRKSSSNRHLLASS-GD-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSID 148 (337)
Q Consensus 71 ~~i~~i~~~~~~~~~~~~~~~~~l~~~-~~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d 148 (337)
..|.++.|+++.. .++.. ++ .++.| .. .....+..+. ..+.+++|++ ++++++++..+
T Consensus 6 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~~---~~--~~~~~~~~~~-----~~~~~~~~~~-~g~l~~~~~~~ 65 (333)
T 2dg1_A 6 QDLPTLFYSGKSN---------SAVPIISESELQTI---TA--EPWLEISKKG-----LQLEGLNFDR-QGQLFLLDVFE 65 (333)
T ss_dssp CCCCBCCSCGGGG---------CSSCCCCGGGSCEE---EC--EEEEEEESSC-----CCEEEEEECT-TSCEEEEETTT
T ss_pred cccceeeecCCcc---------ceeEEeecccCccc---cc--ceeEEEeccC-----ccccCcEECC-CCCEEEEECCC
Confidence 4578888998876 44443 34 88888 22 3444555554 5678999998 88888888889
Q ss_pred CcEEEEeCCCccchhhhhccCCceeEEEeC-CCcEEEEEcCC----CeEEEEECCCCCCceeeecCCCCCCCceEEEeec
Q 038533 149 TTCTIWDIEKGVVETQLIAHDKEVYDICWG-EARVFASVSAD----GSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNK 223 (337)
Q Consensus 149 g~i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~ 223 (337)
+.|.+||..+++.......+...+.+++++ +++++++...+ +.|.+||..+.......... .....+..+.++|
T Consensus 66 ~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~i~~d~ 144 (333)
T 2dg1_A 66 GNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDL-STAYCIDDMVFDS 144 (333)
T ss_dssp CEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSS-SSCCCEEEEEECT
T ss_pred CEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccC-ccCCcccceEECC
Confidence 999999998876544333456779999999 67777776666 68999999877644232211 2345789999999
Q ss_pred CCCcEEEEEEe------cCCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCC
Q 038533 224 QDLRYMATILM------DSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPN 297 (337)
Q Consensus 224 ~~~~~l~~~~~------d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 297 (337)
+++++++... .+. |..+|... ++ +..+......+..++|+|+++.++++.+.++.|.+|++. +.....
T Consensus 145 -~g~l~v~~~~~~~~~~~~~-l~~~~~~~-~~-~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~--~~g~~~ 218 (333)
T 2dg1_A 145 -KGGFYFTDFRGYSTNPLGG-VYYVSPDF-RT-VTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALE--DDGVTI 218 (333)
T ss_dssp -TSCEEEEECCCBTTBCCEE-EEEECTTS-CC-EEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC--TTSSSE
T ss_pred -CCCEEEEeccccccCCCce-EEEEeCCC-CE-EEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEec--CCCcCc
Confidence 8877766543 233 66666553 22 333333344578999999998344555668899999996 211100
Q ss_pred CC-CceeeeeC--CCceeEEEEccCCCceEEEEcCCcEEEEe
Q 038533 298 GI-DPMSMYSA--GSEINQLQWSPAQPDWLAIAFSNKMQLLK 336 (337)
Q Consensus 298 ~~-~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~i~iw~ 336 (337)
.. ........ ...+..++++++|..+++...++.|.+|+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d 260 (333)
T 2dg1_A 219 QPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFN 260 (333)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEEC
T ss_pred ccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEEC
Confidence 00 00011111 14678899999998666666788999986
No 187
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.67 E-value=1.2e-13 Score=113.53 Aligned_cols=232 Identities=10% Similarity=-0.011 Sum_probs=156.9
Q ss_pred CCceeEEEEe--cc-eEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEe
Q 038533 21 PYPLYAMAVC--GQ-RIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASS 97 (337)
Q Consensus 21 ~~~v~~~~~s--~~-~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~ 97 (337)
.....+++|+ ++ +++++.. ++.|..|+.+.. ... + ..+...+.+++++|++. ++++.
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~~----~~~i~~~~~~~~---~~~---~-~~~~~~~~~l~~~~dg~---------l~v~~ 86 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDVR----QNRTWAWSDDGQ---LSP---E-MHPSHHQNGHCLNKQGH---------LIACS 86 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEGG----GTEEEEEETTSC---EEE---E-ESSCSSEEEEEECTTCC---------EEEEE
T ss_pred CccccCCeEeCCCCEEEEEeCC----CCEEEEEECCCC---eEE---E-ECCCCCcceeeECCCCc---------EEEEe
Confidence 4567899999 66 6777775 888999877654 221 1 23556789999999998 88877
Q ss_pred C-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEE----ee-------------CCCcEEEEeCCC
Q 038533 98 G-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGT----CS-------------IDTTCTIWDIEK 158 (337)
Q Consensus 98 ~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~----~~-------------~dg~i~v~d~~~ 158 (337)
. + .|.+||..+++..... ..... .....+.+++++| +++++++ |+ ..+.|..++..
T Consensus 87 ~~~~~i~~~d~~~g~~~~~~--~~~~~-~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~- 161 (296)
T 3e5z_A 87 HGLRRLERQREPGGEWESIA--DSFEG-KKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD- 161 (296)
T ss_dssp TTTTEEEEECSTTCCEEEEE--CEETT-EECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-
T ss_pred cCCCeEEEEcCCCCcEEEEe--eccCC-CCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCC-
Confidence 6 4 9999999877532221 11110 0013567899998 8988887 33 13466666654
Q ss_pred ccchhhhhccCCceeEEEeC-CCcEEEEEcCCCeEEEEECC-CCCC-c-eeeecCCCCCCCceEEEeecCCCcEEEEEEe
Q 038533 159 GVVETQLIAHDKEVYDICWG-EARVFASVSADGSVRIFDLR-DKEH-S-TIIYESPQPDTPLLRLAWNKQDLRYMATILM 234 (337)
Q Consensus 159 ~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~-~~~~-~-~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~ 234 (337)
++ +..+..+......++|+ +++.+++.+.++.|.+||+. .++. . ..... .+...+..+++++ +++++++.
T Consensus 162 g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~--~~~~~p~~i~~d~-~G~l~v~~-- 235 (296)
T 3e5z_A 162 GT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFT--VEPGKTDGLRVDA-GGLIWASA-- 235 (296)
T ss_dssp SC-EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEEC--CSSSCCCSEEEBT-TSCEEEEE--
T ss_pred CC-EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEee--CCCCCCCeEEECC-CCCEEEEc--
Confidence 43 33334455667899999 78878778888999999997 3332 1 12221 2445677899998 88766655
Q ss_pred cCCEEEEEECCCCCCCeEEeecccceeeEEEe-CCCCCCeEEEEcCCCcEEEEeCC
Q 038533 235 DSNKVVILDIRSPTLPVAELERHRACVNAIAW-APQSRRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 235 d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~l~~~~~dg~i~iw~~~ 289 (337)
++. |.+||.. ++.+..+..+.. +.+++| .|+++ .|++++.++ +.-++..
T Consensus 236 ~~~-v~~~~~~--g~~~~~~~~~~~-~~~~~f~~~d~~-~L~v~t~~~-l~~~~~~ 285 (296)
T 3e5z_A 236 GDG-VHVLTPD--GDELGRVLTPQT-TSNLCFGGPEGR-TLYMTVSTE-FWSIETN 285 (296)
T ss_dssp TTE-EEEECTT--SCEEEEEECSSC-CCEEEEESTTSC-EEEEEETTE-EEEEECS
T ss_pred CCe-EEEECCC--CCEEEEEECCCC-ceeEEEECCCCC-EEEEEcCCe-EEEEEcc
Confidence 666 9999986 455677776666 899999 68888 777777653 4344444
No 188
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.64 E-value=6.2e-13 Score=118.32 Aligned_cols=273 Identities=15% Similarity=0.096 Sum_probs=175.6
Q ss_pred cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecC-
Q 038533 31 GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVG- 107 (337)
Q Consensus 31 ~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~- 107 (337)
++++++... .++.|.++|.+....... ......+..+.|+|+++ ++.+++ + .|.+||+.
T Consensus 166 ~~~~~V~~~---~~~~V~viD~~t~~v~~~------i~~g~~p~~v~~SpDGr---------~lyv~~~dg~V~viD~~~ 227 (567)
T 1qks_A 166 ENLFSVTLR---DAGQIALIDGSTYEIKTV------LDTGYAVHISRLSASGR---------YLFVIGRDGKVNMIDLWM 227 (567)
T ss_dssp GGEEEEEET---TTTEEEEEETTTCCEEEE------EECSSCEEEEEECTTSC---------EEEEEETTSEEEEEETTS
T ss_pred CceEEEEeC---CCCeEEEEECCCCeEEEE------EeCCCCccceEECCCCC---------EEEEEcCCCeEEEEECCC
Confidence 445544442 489999977665433222 23344577999999999 655555 5 99999996
Q ss_pred -CCCccceeeecCCCCCcccCCeeEEEee----cCCCCeEEEeeC-CCcEEEEeCCCccchhhhhc----------cCC-
Q 038533 108 -DSSIEPVAVLNNSKSSEFCAPLTSFDWN----EIEPKRIGTCSI-DTTCTIWDIEKGVVETQLIA----------HDK- 170 (337)
Q Consensus 108 -~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~l~~~~~-dg~i~v~d~~~~~~~~~~~~----------~~~- 170 (337)
+. +.+..+... .....++|+ | ++++++++.. ++.|.++|..+.+.+..+.. |..
T Consensus 228 ~t~--~~v~~i~~G------~~P~~ia~s~~~~p-DGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~ 298 (567)
T 1qks_A 228 KEP--TTVAEIKIG------SEARSIETSKMEGW-EDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEP 298 (567)
T ss_dssp SSC--CEEEEEECC------SEEEEEEECCSTTC-TTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCC
T ss_pred CCC--cEeEEEecC------CCCceeEEccccCC-CCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCC
Confidence 55 455556543 345789999 6 8887777654 58999999998887765542 212
Q ss_pred ceeEEEeC-C-CcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCC
Q 038533 171 EVYDICWG-E-ARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPT 248 (337)
Q Consensus 171 ~v~~~~~~-~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~ 248 (337)
.+..+..+ + ...++....+|.|.++|....+........ .......+.|+| ++++++++......|.++|+.+ .
T Consensus 299 rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~--~~~~~~d~~~~p-dgr~~~va~~~sn~V~ViD~~t-~ 374 (567)
T 1qks_A 299 RVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS--AERFLHDGGLDG-SHRYFITAANARNKLVVIDTKE-G 374 (567)
T ss_dssp CEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE--CCSSEEEEEECT-TSCEEEEEEGGGTEEEEEETTT-T
T ss_pred ceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeee--ccccccCceECC-CCCEEEEEeCCCCeEEEEECCC-C
Confidence 56777777 3 456667777899999999876533222211 234567889999 9999888776555599999998 4
Q ss_pred CCeEEeec-----ccceeeEEE-eCCCCCCeEEEEc-CCCcEEEEeCCCCCCCCCCCCCc-eeeeeCCCceeEEEEccCC
Q 038533 249 LPVAELER-----HRACVNAIA-WAPQSRRHICSVG-DDSQAFIWELPLPPVAGPNGIDP-MSMYSAGSEINQLQWSPAQ 320 (337)
Q Consensus 249 ~~~~~~~~-----~~~~v~~~~-~~~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~ 320 (337)
+.+..+.. |.+ ..+. ++|++..+++++. .++.|.++|....+-.. ...+. ..+......-..+..+|++
T Consensus 375 kl~~~i~vgg~~Phpg--~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~-~~~kvv~~i~~~g~g~~~i~~~p~~ 451 (567)
T 1qks_A 375 KLVAIEDTGGQTPHPG--RGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPD-NAWKILDSFPALGGGSLFIKTHPNS 451 (567)
T ss_dssp EEEEEEECSSSSBCCT--TCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTT-TBTSEEEEEECSCSCCCCEECCTTC
T ss_pred cEEEEEeccCcCCCCc--cceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCcc-ccCEEEEEEecCCCCCEEEEeCCCC
Confidence 44544433 322 1222 5887553666654 56899999998321110 01112 2333233333557889999
Q ss_pred CceEEEEc-------CCcEEEEeC
Q 038533 321 PDWLAIAF-------SNKMQLLKV 337 (337)
Q Consensus 321 ~~l~~~~~-------d~~i~iw~l 337 (337)
+++.+... .+.|.++++
T Consensus 452 ~~l~v~~~~~~~~~~~~~v~v~d~ 475 (567)
T 1qks_A 452 QYLYVDATLNPEAEISGSVAVFDI 475 (567)
T ss_dssp SEEEEECTTCSSHHHHTCEEEEEG
T ss_pred CeEEEecCCCCCcccCceEEEEEC
Confidence 88887652 358888874
No 189
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.63 E-value=1.9e-13 Score=110.99 Aligned_cols=211 Identities=10% Similarity=0.010 Sum_probs=151.1
Q ss_pred cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCC-CCCeEEEecCCCCcccCcCCccEEEEeCCeEEEEecCCC
Q 038533 31 GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHP-YPPTKLMFDPNSSSRKSSSNRHLLASSGDFLRLWDVGDS 109 (337)
Q Consensus 31 ~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~-~~i~~i~~~~~~~~~~~~~~~~~l~~~~~~v~vw~~~~~ 109 (337)
+++|++++. ++.|.+|+.+..+..... ..+. ..++++.++|+++ ++++..+.|..||. ++
T Consensus 5 ~~~lv~~~~----~~~v~~~d~~tG~~~w~~-----~~~~~~~~~~~~~~pdG~---------ilvs~~~~V~~~d~-~G 65 (276)
T 3no2_A 5 QHLLVGGSG----WNKIAIINKDTKEIVWEY-----PLEKGWECNSVAATKAGE---------ILFSYSKGAKMITR-DG 65 (276)
T ss_dssp CEEEEECTT----CSEEEEEETTTTEEEEEE-----ECCTTCCCCEEEECTTSC---------EEEECBSEEEEECT-TS
T ss_pred CcEEEeeCC----CCEEEEEECCCCeEEEEe-----CCCccCCCcCeEECCCCC---------EEEeCCCCEEEECC-CC
Confidence 678888886 999999876544443333 2222 4689999999998 88854349999999 66
Q ss_pred CccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeC-CCcEEEEeCCCccchhhhh------ccCCceeEEEeC-CCc
Q 038533 110 SIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSI-DTTCTIWDIEKGVVETQLI------AHDKEVYDICWG-EAR 181 (337)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-dg~i~v~d~~~~~~~~~~~------~~~~~v~~~~~~-~~~ 181 (337)
+.+..+..+. ...+.++.+.+ +++++++.+. ++.|..+|. +++.+..+. .+......+++. +++
T Consensus 66 --~~~W~~~~~~----~~~~~~~~~~~-dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~ 137 (276)
T 3no2_A 66 --RELWNIAAPA----GCEMQTARILP-DGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGN 137 (276)
T ss_dssp --CEEEEEECCT----TCEEEEEEECT-TSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSC
T ss_pred --CEEEEEcCCC----CccccccEECC-CCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCC
Confidence 5666666532 03678889998 9999999887 788888886 666554443 111234556667 799
Q ss_pred EEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeeccc---
Q 038533 182 VFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHR--- 258 (337)
Q Consensus 182 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~--- 258 (337)
++++...++.|..||.. ++........ ....++...+ ++++++++..++. |..+|..+ ++.+.++..+.
T Consensus 138 ~lv~~~~~~~v~~~d~~-G~~~w~~~~~----~~~~~~~~~~-~g~~~v~~~~~~~-v~~~d~~t-G~~~w~~~~~~~~~ 209 (276)
T 3no2_A 138 YLVPLFATSEVREIAPN-GQLLNSVKLS----GTPFSSAFLD-NGDCLVACGDAHC-FVQLNLES-NRIVRRVNANDIEG 209 (276)
T ss_dssp EEEEETTTTEEEEECTT-SCEEEEEECS----SCCCEEEECT-TSCEEEECBTTSE-EEEECTTT-CCEEEEEEGGGSBS
T ss_pred EEEEecCCCEEEEECCC-CCEEEEEECC----CCccceeEcC-CCCEEEEeCCCCe-EEEEeCcC-CcEEEEecCCCCCC
Confidence 99999999999999998 7654443322 3456677777 8888888777666 99999987 66677765432
Q ss_pred ---ceeeEEEeCCCCCCeEEEE
Q 038533 259 ---ACVNAIAWAPQSRRHICSV 277 (337)
Q Consensus 259 ---~~v~~~~~~~~~~~~l~~~ 277 (337)
..+..++..++|. ++++.
T Consensus 210 ~~l~~~~~~~~~~~G~-i~v~~ 230 (276)
T 3no2_A 210 VQLFFVAQLFPLQNGG-LYICN 230 (276)
T ss_dssp CCCSEEEEEEECTTSC-EEEEE
T ss_pred ccccccccceEcCCCC-EEEEe
Confidence 2377888899998 66665
No 190
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.63 E-value=3.5e-13 Score=124.30 Aligned_cols=244 Identities=11% Similarity=0.073 Sum_probs=160.9
Q ss_pred ceeEEEEe--cceEEEeeeeccC-cceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-
Q 038533 23 PLYAMAVC--GQRIAVGSFIEDY-TNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG- 98 (337)
Q Consensus 23 ~v~~~~~s--~~~la~g~~~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~- 98 (337)
.+..++|| |++||.+....+. ...|++|+++........ ..+ ..+..++|+||++ .|+.++
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~-----~~~-~~~~~~~wspDg~---------~l~~~~~ 190 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDV-----LER-VKFSCMAWTHDGK---------GMFYNAY 190 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEE-----EEE-ECSCCEEECTTSS---------EEEEEEC
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccc-----ccC-cccceEEEEeCCC---------EEEEEEE
Confidence 57889999 8999988762211 127888887654322211 111 2377899999998 555543
Q ss_pred C-e----------------EEEEecCCCCccceeeecC--CCCCcccCCeeEEEeecCCCCeEEEeeC-----CCcEEEE
Q 038533 99 D-F----------------LRLWDVGDSSIEPVAVLNN--SKSSEFCAPLTSFDWNEIEPKRIGTCSI-----DTTCTIW 154 (337)
Q Consensus 99 ~-~----------------v~vw~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~l~~~~~-----dg~i~v~ 154 (337)
+ . |++|++.+++.+....+.. +. ..+..+.|+| ++++|+.++. +..|++|
T Consensus 191 ~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~-----~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~ 264 (710)
T 2xdw_A 191 PQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEP-----KWMGGAELSD-DGRYVLLSIREGCDPVNRLWYC 264 (710)
T ss_dssp CCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCT-----TCEEEEEECT-TSCEEEEEEECSSSSCCEEEEE
T ss_pred CCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCC-----eEEEEEEEcC-CCCEEEEEEEccCCCccEEEEE
Confidence 3 4 9999998874332333332 22 4578899999 9998887764 5789999
Q ss_pred eCCC------cc-chhhhhccCCceeEEEeC-CCcEEEEEcCC----CeEEEEECCCCCC--ceeeecCCCCCCCceEEE
Q 038533 155 DIEK------GV-VETQLIAHDKEVYDICWG-EARVFASVSAD----GSVRIFDLRDKEH--STIIYESPQPDTPLLRLA 220 (337)
Q Consensus 155 d~~~------~~-~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d----g~i~iwd~~~~~~--~~~~~~~~~~~~~i~~~~ 220 (337)
|+.+ +. ....+..+...+.. .|+ +++.|+..+.. +.|.+||+.++.. ...+... .....+..+.
T Consensus 265 d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~-~~~~~~~~~~ 342 (710)
T 2xdw_A 265 DLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPE-HEKDVLEWVA 342 (710)
T ss_dssp EGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECC-CSSCEEEEEE
T ss_pred ECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCC-CCCCeEEEEE
Confidence 9976 43 34455555555554 355 67766665543 3699999987652 1233322 1123677899
Q ss_pred eecCCCcEEEEEEecCC-EEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEc---CCCcEEEEeCCCC
Q 038533 221 WNKQDLRYMATILMDSN-KVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVG---DDSQAFIWELPLP 291 (337)
Q Consensus 221 ~~~~~~~~l~~~~~d~~-~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~---~dg~i~iw~~~~~ 291 (337)
|++ ++.++++...++. .|++||+.+ +..+..+..+...+..+.++|+++.++++.+ ..+.|..||+..+
T Consensus 343 ~~~-~~~lv~~~~~~g~~~l~~~~~~~-g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg 415 (710)
T 2xdw_A 343 CVR-SNFLVLCYLHDVKNTLQLHDLAT-GALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKE 415 (710)
T ss_dssp EET-TTEEEEEEEETTEEEEEEEETTT-CCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSS
T ss_pred EEc-CCEEEEEEEECCEEEEEEEECCC-CCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCC
Confidence 986 7778888877774 367778755 4456677777778899999999873444433 3578999999743
No 191
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.62 E-value=3.9e-12 Score=113.18 Aligned_cols=297 Identities=10% Similarity=0.077 Sum_probs=186.6
Q ss_pred cceeeeeCCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEec----CCCCccc
Q 038533 13 ENSVTHESPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFD----PNSSSRK 86 (337)
Q Consensus 13 ~~~~~~~~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~----~~~~~~~ 86 (337)
+.+.++.....+..++|+ +++|++++. ++.|.+||+...+..... . .........++|+ |+++
T Consensus 188 ~v~~~i~~g~~p~~v~~SpDGr~lyv~~~----dg~V~viD~~~~t~~~v~--~--i~~G~~P~~ia~s~~~~pDGk--- 256 (567)
T 1qks_A 188 EIKTVLDTGYAVHISRLSASGRYLFVIGR----DGKVNMIDLWMKEPTTVA--E--IKIGSEARSIETSKMEGWEDK--- 256 (567)
T ss_dssp CEEEEEECSSCEEEEEECTTSCEEEEEET----TSEEEEEETTSSSCCEEE--E--EECCSEEEEEEECCSTTCTTT---
T ss_pred eEEEEEeCCCCccceEECCCCCEEEEEcC----CCeEEEEECCCCCCcEeE--E--EecCCCCceeEEccccCCCCC---
Confidence 344556666677899999 888888885 899999988522222222 1 1223346799999 6998
Q ss_pred CcCCccEEEEeC--C-eEEEEecCCCCccceeeecCCCC-----Ccc-cCCeeEEEeecCCCCeEEEeeCCCcEEEEeCC
Q 038533 87 SSSNRHLLASSG--D-FLRLWDVGDSSIEPVAVLNNSKS-----SEF-CAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIE 157 (337)
Q Consensus 87 ~~~~~~~l~~~~--~-~v~vw~~~~~~~~~~~~~~~~~~-----~~~-~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~ 157 (337)
+++++. + .|.++|..+. +.+..+..... ..+ ...+..+..++.....++....+|.|.++|..
T Consensus 257 ------~l~v~n~~~~~v~ViD~~t~--~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~ 328 (567)
T 1qks_A 257 ------YAIAGAYWPPQYVIMDGETL--EPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYT 328 (567)
T ss_dssp ------EEEEEEEETTEEEEEETTTC--CEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETT
T ss_pred ------EEEEEEccCCeEEEEECCCC--cEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecC
Confidence 666655 3 9999998887 44444432110 000 12577888887445566666778999999987
Q ss_pred Cccch--hhhhccCCceeEEEeC-CCcEEEEEc-CCCeEEEEECCCCCCceeeec-CC-CCCCCceEEEeecCCCcEE-E
Q 038533 158 KGVVE--TQLIAHDKEVYDICWG-EARVFASVS-ADGSVRIFDLRDKEHSTIIYE-SP-QPDTPLLRLAWNKQDLRYM-A 230 (337)
Q Consensus 158 ~~~~~--~~~~~~~~~v~~~~~~-~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~-~~-~~~~~i~~~~~~~~~~~~l-~ 230 (337)
+.+.+ ..+ .......++.|+ ++++++++. .++.|.++|+.+++....+.. .. .|.+....+ ++| ++..+ +
T Consensus 329 ~~~~~~v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p-~~g~v~~ 405 (567)
T 1qks_A 329 DLNNLKTTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHP-TFGPVWA 405 (567)
T ss_dssp CSSEEEEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EET-TTEEEEE
T ss_pred CCccceeeee-eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECC-CCCcEEE
Confidence 65422 122 233456788899 788776554 678999999999876555443 21 122222222 567 54444 4
Q ss_pred EEEe-cCCEEEEEECCCCC------CCeEEeecccceeeEEEeCCCCCCeEEEEcC-------CCcEEEEeCCCCCCCCC
Q 038533 231 TILM-DSNKVVILDIRSPT------LPVAELERHRACVNAIAWAPQSRRHICSVGD-------DSQAFIWELPLPPVAGP 296 (337)
Q Consensus 231 ~~~~-d~~~i~i~d~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-------dg~i~iw~~~~~~~~~~ 296 (337)
+... ++. |.++|....+ +.++++......-..+..+|+++ .|.+... .+.|.++|+. ++..
T Consensus 406 t~~~g~~~-Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~-~l~v~~~~~~~~~~~~~v~v~d~~--~~~~- 480 (567)
T 1qks_A 406 TSHMGDDS-VALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQ-YLYVDATLNPEAEISGSVAVFDIK--AMTG- 480 (567)
T ss_dssp EEBSSSSE-EEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCS-EEEEECTTCSSHHHHTCEEEEEGG--GCCC-
T ss_pred eCCCCCCe-EEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCC-eEEEecCCCCCcccCceEEEEECC--cccc-
Confidence 4433 355 9999987622 34556654433335578999999 6666552 3599999998 4310
Q ss_pred CC-CCc-eeee--------eCCCceeEEEEccCCCceEEEEc-----CCcEEEEe
Q 038533 297 NG-IDP-MSMY--------SAGSEINQLQWSPAQPDWLAIAF-----SNKMQLLK 336 (337)
Q Consensus 297 ~~-~~~-~~~~--------~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~iw~ 336 (337)
.+ ... ..+. .....+..+.|+|+|+.+..+.. ++.|.|+|
T Consensus 481 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D 535 (567)
T 1qks_A 481 DGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVD 535 (567)
T ss_dssp SSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEE
T ss_pred cccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEE
Confidence 00 011 1111 12457899999999998877643 68888876
No 192
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.62 E-value=7.1e-13 Score=110.60 Aligned_cols=238 Identities=9% Similarity=-0.004 Sum_probs=158.0
Q ss_pred CceeEEEEe-cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEe-CC
Q 038533 22 YPLYAMAVC-GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASS-GD 99 (337)
Q Consensus 22 ~~v~~~~~s-~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~-~~ 99 (337)
.....+.+. ++++++... ++.|.+||.......... ........+++++++. ++++. .+
T Consensus 44 ~~~~~i~~~~~~lyv~~~~----~~~v~viD~~t~~~~~~i------~~~~~p~~i~~~~~g~---------lyv~~~~~ 104 (328)
T 3dsm_A 44 DVAQSMVIRDGIGWIVVNN----SHVIFAIDINTFKEVGRI------TGFTSPRYIHFLSDEK---------AYVTQIWD 104 (328)
T ss_dssp SCEEEEEEETTEEEEEEGG----GTEEEEEETTTCCEEEEE------ECCSSEEEEEEEETTE---------EEEEEBSC
T ss_pred ccceEEEEECCEEEEEEcC----CCEEEEEECcccEEEEEc------CCCCCCcEEEEeCCCe---------EEEEECCC
Confidence 345678888 555555553 789999777644332221 2345678999999887 77777 45
Q ss_pred -eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEee-CCCcEEEEeCCCccchhhhhccCCceeEEEe
Q 038533 100 -FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCS-IDTTCTIWDIEKGVVETQLIAHDKEVYDICW 177 (337)
Q Consensus 100 -~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~ 177 (337)
.|.+||..++ +....+..............+++ . ++.++++.. .++.|.++|+.+++.+..+.. ......+++
T Consensus 105 ~~v~~iD~~t~--~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~-g~~p~~i~~ 179 (328)
T 3dsm_A 105 YRIFIINPKTY--EITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDELTI-GIQPTSLVM 179 (328)
T ss_dssp SEEEEEETTTT--EEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEEEC-SSCBCCCEE
T ss_pred CeEEEEECCCC--eEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEEEc-CCCccceEE
Confidence 9999999988 44444442210000114556777 3 555555554 488999999999887766653 334578888
Q ss_pred C-CCcEEEEEcCC----------CeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCC
Q 038533 178 G-EARVFASVSAD----------GSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRS 246 (337)
Q Consensus 178 ~-~~~~l~~~~~d----------g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~ 246 (337)
+ ++++++++..+ +.|.++|..+.+....+... .......++|+| +++.|+++.. . |.+||..+
T Consensus 180 ~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~--~g~~p~~la~~~-d~~~lyv~~~--~-v~~~d~~t 253 (328)
T 3dsm_A 180 DKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFK--LGDWPSEVQLNG-TRDTLYWINN--D-IWRMPVEA 253 (328)
T ss_dssp CTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECC--TTCCCEEEEECT-TSCEEEEESS--S-EEEEETTC
T ss_pred cCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecC--CCCCceeEEEec-CCCEEEEEcc--E-EEEEECCC
Confidence 8 57766665544 78999999888754443322 123678999999 8888887654 5 99999987
Q ss_pred CCCCeEE-eecccceeeEEEeCCCCCCeEEEE----cCCCcEEEEeCC
Q 038533 247 PTLPVAE-LERHRACVNAIAWAPQSRRHICSV----GDDSQAFIWELP 289 (337)
Q Consensus 247 ~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~----~~dg~i~iw~~~ 289 (337)
....... +.........++++|++..++++. ..++.|.+||..
T Consensus 254 ~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 254 DRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp SSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred CceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 3321111 221235678999999555377776 678999999988
No 193
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.61 E-value=4e-12 Score=104.37 Aligned_cols=272 Identities=10% Similarity=0.007 Sum_probs=175.6
Q ss_pred CCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC
Q 038533 21 PYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG 98 (337)
Q Consensus 21 ~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~ 98 (337)
...+.++++. +++.++... ++.|.+|+.+ ..+... .+ ......+.++++.+++. ++++..
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~----~~~v~~~~~~---~~~~~~-~~-~~~~~~~~~i~~~~~g~---------l~v~~~ 80 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHK----ANKISSLDQS---GRIKEF-EV-PTPDAKVMCLIVSSLGD---------IWFTEN 80 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETT----TTEEEEECTT---SCEEEE-EC-SSTTCCEEEEEECTTSC---------EEEEET
T ss_pred CCCcceeeECCCCCEEEEcCC----CCeEEEECCC---CceEEE-EC-CCCCCcceeEEECCCCC---------EEEEec
Confidence 3578899998 555554433 7889887655 222210 11 23346788999999988 777766
Q ss_pred -C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchh-hhhccCCceeEE
Q 038533 99 -D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVET-QLIAHDKEVYDI 175 (337)
Q Consensus 99 -~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~-~~~~~~~~v~~~ 175 (337)
+ .|..||.. ++. ....+.... ..+.++++.+ +++++++...++.|..+|.. ++... .+......+..+
T Consensus 81 ~~~~v~~~d~~-g~~-~~~~~~~~~-----~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i 151 (300)
T 2qc5_A 81 GANKIGKLSKK-GGF-TEYPLPQPD-----SGPYGITEGL-NGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFI 151 (300)
T ss_dssp TTTEEEEECTT-SCE-EEEECSSTT-----CCEEEEEECS-TTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEE
T ss_pred CCCeEEEECCC-CCe-EEecCCCCC-----CCCccceECC-CCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeE
Confidence 4 89999987 532 222222222 5688999998 88888887778899999987 54332 222234568899
Q ss_pred EeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEE-
Q 038533 176 CWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAE- 253 (337)
Q Consensus 176 ~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~- 253 (337)
+++ +++++++...++.|..+|. +++... . ..+.....+..+++++ ++.+.++....+. |.+||. . +.....
T Consensus 152 ~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~-~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~-i~~~~~-~-g~~~~~~ 224 (300)
T 2qc5_A 152 TLGSDNALWFTENQNNSIGRITN-TGKLEE-Y-PLPTNAAAPVGITSGN-DGALWFVEIMGNK-IGRITT-T-GEISEYD 224 (300)
T ss_dssp EECTTSSEEEEETTTTEEEEECT-TCCEEE-E-ECSSTTCCEEEEEECT-TSSEEEEETTTTE-EEEECT-T-CCEEEEE
T ss_pred EECCCCCEEEEecCCCeEEEECC-CCcEEE-e-eCCCCCCCcceEEECC-CCCEEEEccCCCE-EEEEcC-C-CcEEEEE
Confidence 998 6776666666889999998 444322 2 2222345688999998 7766655444555 999998 3 332221
Q ss_pred eecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEcCCcEE
Q 038533 254 LERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQ 333 (337)
Q Consensus 254 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 333 (337)
...+...+.++++.++|. ++++...++.|..|+.. .. ............+.++++.++|..++ ++.+ .|.
T Consensus 225 ~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~~--g~-----~~~~~~~~~~~~~~~i~~~~~g~l~v-~~~~-~i~ 294 (300)
T 2qc5_A 225 IPTPNARPHAITAGKNSE-IWFTEWGANQIGRITND--NT-----IQEYQLQTENAEPHGITFGKDGSVWF-ALKC-KIG 294 (300)
T ss_dssp CSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTT--SC-----EEEEECCSTTCCCCCEEECTTSCEEE-ECSS-EEE
T ss_pred CCCCCCCceEEEECCCCC-EEEeccCCCeEEEECCC--Cc-----EEEEECCccCCccceeEeCCCCCEEE-EccC-ceE
Confidence 223445688999999998 77777777899999875 20 00111222345689999999997444 4444 555
Q ss_pred EEe
Q 038533 334 LLK 336 (337)
Q Consensus 334 iw~ 336 (337)
.++
T Consensus 295 ~~~ 297 (300)
T 2qc5_A 295 KLN 297 (300)
T ss_dssp EEE
T ss_pred EeC
Confidence 543
No 194
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.61 E-value=2.6e-12 Score=110.29 Aligned_cols=235 Identities=11% Similarity=0.010 Sum_probs=156.5
Q ss_pred CCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCC
Q 038533 71 YPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSID 148 (337)
Q Consensus 71 ~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d 148 (337)
.....|+|++++. ++++.. + .|++||..++. ........ .... ++|++ +++.++++..+
T Consensus 131 ~~P~~la~d~~g~---------lyv~d~~~~~I~~id~~~g~--~~~~~~~~------~~~~-ia~~~-~g~~l~~~d~~ 191 (409)
T 3hrp_A 131 KYMWGIAAVGNNT---------VLAYQRDDPRVRLISVDDNK--VTTVHPGF------KGGK-PAVTK-DKQRVYSIGWE 191 (409)
T ss_dssp CCEEEEEECSTTE---------EEEEETTTTEEEEEETTTTE--EEEEEETC------CBCB-CEECT-TSSEEEEEBSS
T ss_pred CCceEEEEeCCCC---------EEEEecCCCcEEEEECCCCE--EEEeeccC------CCCc-eeEec-CCCcEEEEecC
Confidence 3567899999987 888776 3 99999998873 33333332 2233 99998 88888888776
Q ss_pred C--cEEEEeCCCccchhhh----hccCCceeEEEeCC-CcEEEEEcCCCeEEEEECCCCCCceeeec-CCCCCCCc--eE
Q 038533 149 T--TCTIWDIEKGVVETQL----IAHDKEVYDICWGE-ARVFASVSADGSVRIFDLRDKEHSTIIYE-SPQPDTPL--LR 218 (337)
Q Consensus 149 g--~i~v~d~~~~~~~~~~----~~~~~~v~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~~i--~~ 218 (337)
+ .|.+++...+.....+ ......+.++++++ +..|+.+..++.|..||..+......... .......- ..
T Consensus 192 ~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ 271 (409)
T 3hrp_A 192 GTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPY 271 (409)
T ss_dssp TTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCE
T ss_pred CCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCcccc
Confidence 6 7888887655432232 21445678899994 66677788889999999987753222000 11111222 39
Q ss_pred EEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeeccc---------------ceeeEEEeCCCCCCeEEEEc-CCCc
Q 038533 219 LAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHR---------------ACVNAIAWAPQSRRHICSVG-DDSQ 282 (337)
Q Consensus 219 ~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~---------------~~v~~~~~~~~~~~~l~~~~-~dg~ 282 (337)
++|+| ++..|+.+......|+.||... . +..+.++. .....++++|+|. ++++-. .+++
T Consensus 272 ia~~p-~~g~lyv~d~~~~~I~~~~~~g--~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~ 346 (409)
T 3hrp_A 272 LIYYF-VDSNFYMSDQNLSSVYKITPDG--E-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYC 346 (409)
T ss_dssp EEEET-TTTEEEEEETTTTEEEEECTTC--C-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCE
T ss_pred EEEeC-CCCEEEEEeCCCCEEEEEecCC--C-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCE
Confidence 99999 5555555555444599998764 2 33443332 3478999999998 888888 8999
Q ss_pred EEEEeCCCCCCCCCCCCCceeeeeC---------------CCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 283 AFIWELPLPPVAGPNGIDPMSMYSA---------------GSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 283 i~iw~~~~~~~~~~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
|+.|++..+. ...+.++ -.....++++|++..+++-..++.|+.+.+
T Consensus 347 I~~~~~~~G~--------v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 347 LRKLDILDGY--------VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEEEETTTTE--------EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EEEEECCCCE--------EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 9999976221 2223332 245899999999866666667788887653
No 195
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.61 E-value=2e-12 Score=107.01 Aligned_cols=235 Identities=9% Similarity=0.053 Sum_probs=152.2
Q ss_pred CCCeEEEecCCCCcccCcCCccEEEE-------e-CC-eEEEEecCCCCccceee--ecCCCCCcccCCeeEEEeecCC-
Q 038533 71 YPPTKLMFDPNSSSRKSSSNRHLLAS-------S-GD-FLRLWDVGDSSIEPVAV--LNNSKSSEFCAPLTSFDWNEIE- 138 (337)
Q Consensus 71 ~~i~~i~~~~~~~~~~~~~~~~~l~~-------~-~~-~v~vw~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~- 138 (337)
....+++|.+++. ++++ + .+ .|.+||..+++...... ..++. ..+.++++++ +
T Consensus 18 ~~~~~~~~~~~g~---------l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~-----~~~~~i~~~~-~~ 82 (314)
T 1pjx_A 18 PGAEGPVFDKNGD---------FYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYG-----GIPAGCQCDR-DA 82 (314)
T ss_dssp TTCEEEEECTTSC---------EEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEE-----CCEEEEEECS-SS
T ss_pred CCccCceECCCCC---------EEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCC-----CCCceEEEec-CC
Confidence 3568999999888 7777 3 34 89999988874322111 00122 5688999998 7
Q ss_pred CCeEEEeeCCCcEEEEeCCCccchhh-hh----ccCCceeEEEeC-CCcEEEEEcCC---------------CeEEEEEC
Q 038533 139 PKRIGTCSIDTTCTIWDIEKGVVETQ-LI----AHDKEVYDICWG-EARVFASVSAD---------------GSVRIFDL 197 (337)
Q Consensus 139 ~~~l~~~~~dg~i~v~d~~~~~~~~~-~~----~~~~~v~~~~~~-~~~~l~~~~~d---------------g~i~iwd~ 197 (337)
++++++.. .+.|.+||.. ++.... .. .....+.+++++ +++++++...+ +.|..||.
T Consensus 83 g~l~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 160 (314)
T 1pjx_A 83 NQLFVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTT 160 (314)
T ss_dssp SEEEEEET-TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECT
T ss_pred CcEEEEEC-CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECC
Confidence 66555544 4579999987 654322 21 112357899999 67777666554 56777776
Q ss_pred CCCCCceeeecCCCCCCCceEEEee----cCCCcEEEEEEe-cCCEEEEEECCCCCC-----CeEEeeccc-ceeeEEEe
Q 038533 198 RDKEHSTIIYESPQPDTPLLRLAWN----KQDLRYMATILM-DSNKVVILDIRSPTL-----PVAELERHR-ACVNAIAW 266 (337)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~l~~~~~-d~~~i~i~d~~~~~~-----~~~~~~~~~-~~v~~~~~ 266 (337)
. ++...... .......++|+ | +++.++++.. ++. |.+||....+. ....+..+. ..+..+++
T Consensus 161 ~-g~~~~~~~----~~~~~~~i~~~~~~d~-dg~~l~v~~~~~~~-i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~ 233 (314)
T 1pjx_A 161 D-GQMIQVDT----AFQFPNGIAVRHMNDG-RPYQLIVAETPTKK-LWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDF 233 (314)
T ss_dssp T-SCEEEEEE----EESSEEEEEEEECTTS-CEEEEEEEETTTTE-EEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEE
T ss_pred C-CCEEEecc----CCCCcceEEEecccCC-CCCEEEEEECCCCe-EEEEECCCCCccccceEEEECCCCCCCCCCceEE
Confidence 5 43222211 12345788999 8 8876666654 455 99999862122 122233333 56788999
Q ss_pred CCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEE-cCCcEEEEeC
Q 038533 267 APQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIA-FSNKMQLLKV 337 (337)
Q Consensus 267 ~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iw~l 337 (337)
+++|. ++++...++.|.+||...++ .......+...+.+++|+|+++.|+.++ .++.|..|++
T Consensus 234 d~~G~-l~v~~~~~~~i~~~d~~~g~-------~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 234 DEDNN-LLVANWGSSHIEVFGPDGGQ-------PKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp BTTCC-EEEEEETTTEEEEECTTCBS-------CSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred CCCCC-EEEEEcCCCEEEEEcCCCCc-------EeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 99998 77777778899999987221 1233344557799999999998565554 5678888764
No 196
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.60 E-value=7.5e-14 Score=128.44 Aligned_cols=244 Identities=11% Similarity=0.043 Sum_probs=156.8
Q ss_pred CceeEEEEe--cceEEEeeeec-cCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC
Q 038533 22 YPLYAMAVC--GQRIAVGSFIE-DYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG 98 (337)
Q Consensus 22 ~~v~~~~~s--~~~la~g~~~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~ 98 (337)
..+.+++|| |++||.+.... +++..|++|+++..... .. .. ... .....++|+||++ .|+.++
T Consensus 121 ~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~-~~-~~--~~~-~~~~~~~wspDg~---------~l~~~~ 186 (695)
T 2bkl_A 121 VSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWS-KV-DV--IEG-GKYATPKWTPDSK---------GFYYEW 186 (695)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBC-SS-CC--BSC-CTTCCCEECTTSS---------EEEEEE
T ss_pred EEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCc-CC-cc--cCc-ccccceEEecCCC---------EEEEEE
Confidence 368899999 88998766522 23578999888765422 01 01 111 1126899999998 666554
Q ss_pred -C-e-------------EEEEecCCCCccceeeec--CCCCCcccCCeeEEEeecCCCCeEEEeeCCC----cEEEEeCC
Q 038533 99 -D-F-------------LRLWDVGDSSIEPVAVLN--NSKSSEFCAPLTSFDWNEIEPKRIGTCSIDT----TCTIWDIE 157 (337)
Q Consensus 99 -~-~-------------v~vw~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg----~i~v~d~~ 157 (337)
+ . |++|++.+++.+....+. .+. ..+..+.|+| ++++|+.++.++ .|.+++..
T Consensus 187 ~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~-----~~~~~~~~Sp-DG~~l~~~~~~~~~~~~l~~~~~~ 260 (695)
T 2bkl_A 187 LPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDP-----TTFLQSDLSR-DGKYLFVYILRGWSENDVYWKRPG 260 (695)
T ss_dssp CCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCT-----TCEEEEEECT-TSCCEEEEEEETTTEEEEEEECTT
T ss_pred ecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCC-----EEEEEEEECC-CCCEEEEEEeCCCCceEEEEEcCC
Confidence 3 4 999999988533223333 333 5688999999 999888877666 67777765
Q ss_pred CccchhhhhccCCceeEEEeCCCcEEEEEc---CCCeEEEEECCCCCC--ceeeecCCCCCCCceEEEeecCCCcEEEEE
Q 038533 158 KGVVETQLIAHDKEVYDICWGEARVFASVS---ADGSVRIFDLRDKEH--STIIYESPQPDTPLLRLAWNKQDLRYMATI 232 (337)
Q Consensus 158 ~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~---~dg~i~iwd~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 232 (337)
+++ ...+..+...+....++++++++... .++.|.+||+.+++. ...+... .....+..++|+ ++.++++.
T Consensus 261 ~~~-~~~l~~~~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~-~~~~~l~~~~~~--~~~lv~~~ 336 (695)
T 2bkl_A 261 EKD-FRLLVKGVGAKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPE-DSSASLLSVSIV--GGHLSLEY 336 (695)
T ss_dssp CSS-CEEEEECSSCCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECC-CSSCEEEEEEEE--TTEEEEEE
T ss_pred CCc-eEEeecCCCceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecC-CCCCeEEEEEEE--CCEEEEEE
Confidence 554 34444555566666667666444443 258899999987653 1233222 123457788887 56778888
Q ss_pred EecCCEEEEEECCCCCCCeEEeecc-cceeeEEEeCCCCCCeEEEEc---CCCcEEEEeCCC
Q 038533 233 LMDSNKVVILDIRSPTLPVAELERH-RACVNAIAWAPQSRRHICSVG---DDSQAFIWELPL 290 (337)
Q Consensus 233 ~~d~~~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~---~dg~i~iw~~~~ 290 (337)
..++. .++|.+...+.....+..+ ...+..+.++|+++.++++.+ ..+.|++||+..
T Consensus 337 ~~dg~-~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~ 397 (695)
T 2bkl_A 337 LKDAT-SEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVST 397 (695)
T ss_dssp EETTE-EEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTT
T ss_pred EECCE-EEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 87876 7776554324445555544 567888999999873333333 347899999973
No 197
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.60 E-value=3.6e-12 Score=104.60 Aligned_cols=235 Identities=9% Similarity=0.014 Sum_probs=159.1
Q ss_pred CCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEee
Q 038533 69 HPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCS 146 (337)
Q Consensus 69 ~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~ 146 (337)
+...+.++++.+++. ++++.. + .|.+||.. ++.. ...+..+. ..+.++++++ ++.++++..
T Consensus 13 ~~~~~~~i~~d~~g~---------l~v~~~~~~~v~~~d~~-~~~~-~~~~~~~~-----~~~~~i~~~~-~g~l~v~~~ 75 (299)
T 2z2n_A 13 QDTGPYGITVSDKGK---------VWITQHKANMISCINLD-GKIT-EYPLPTPD-----AKVMCLTISS-DGEVWFTEN 75 (299)
T ss_dssp SSCCEEEEEECTTSC---------EEEEETTTTEEEEECTT-CCEE-EEECSSTT-----CCEEEEEECT-TSCEEEEET
T ss_pred cCCCccceEECCCCC---------EEEEecCCCcEEEEcCC-CCeE-EecCCccc-----CceeeEEECC-CCCEEEeCC
Confidence 345689999999998 777765 4 89999988 5322 11222222 6788999998 888888877
Q ss_pred CCCcEEEEeCCCccc-hhhhhccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecC
Q 038533 147 IDTTCTIWDIEKGVV-ETQLIAHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQ 224 (337)
Q Consensus 147 ~dg~i~v~d~~~~~~-~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 224 (337)
.++.|..||.. ++. ...+......+.+++++ +++++++...++.|..||. +++...... ......+..+++++
T Consensus 76 ~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~--~~~~~~~~~i~~~~- 150 (299)
T 2z2n_A 76 AANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYEL--PNKGSYPSFITLGS- 150 (299)
T ss_dssp TTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEEC--SSTTCCEEEEEECT-
T ss_pred CCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecC--CCCCCCCceEEEcC-
Confidence 78899999976 332 11112234568899999 6777777777889999998 444322221 12345688999998
Q ss_pred CCcEEEEEEecCCEEEEEECCCCCCCeEE-eecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCcee
Q 038533 225 DLRYMATILMDSNKVVILDIRSPTLPVAE-LERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMS 303 (337)
Q Consensus 225 ~~~~l~~~~~d~~~i~i~d~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~ 303 (337)
++.++++...++. |..||. + ++.... .......+..+++.+++. ++++...++.|.+|+.. +.. ....
T Consensus 151 ~g~l~v~~~~~~~-i~~~~~-~-g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~~------~~~~ 219 (299)
T 2z2n_A 151 DNALWFTENQNNA-IGRITE-S-GDITEFKIPTPASGPVGITKGNDDA-LWFVEIIGNKIGRITTS-GEI------TEFK 219 (299)
T ss_dssp TSCEEEEETTTTE-EEEECT-T-CCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECTT-CCE------EEEE
T ss_pred CCCEEEEeCCCCE-EEEEcC-C-CcEEEeeCCCCCCcceeEEECCCCC-EEEEccCCceEEEECCC-CcE------EEEE
Confidence 7776665544555 999998 4 332221 233345678999999988 77777778899999883 220 0111
Q ss_pred eeeCCCceeEEEEccCCCceEEEEcCCcEEEEe
Q 038533 304 MYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLK 336 (337)
Q Consensus 304 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~ 336 (337)
...+...+.+++++++|..+++...++.|..|+
T Consensus 220 ~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d 252 (299)
T 2z2n_A 220 IPTPNARPHAITAGAGIDLWFTEWGANKIGRLT 252 (299)
T ss_dssp CSSTTCCEEEEEECSTTCEEEEETTTTEEEEEE
T ss_pred CCCCCCCceeEEECCCCCEEEeccCCceEEEEC
Confidence 223446789999999997555544678888876
No 198
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.59 E-value=1.3e-13 Score=115.86 Aligned_cols=213 Identities=11% Similarity=0.130 Sum_probs=139.7
Q ss_pred CCCeEEEecCCCCcccCcCCccEEEEe--------C--C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCC
Q 038533 71 YPPTKLMFDPNSSSRKSSSNRHLLASS--------G--D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEP 139 (337)
Q Consensus 71 ~~i~~i~~~~~~~~~~~~~~~~~l~~~--------~--~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 139 (337)
..+...++ +++ .++.. . + .|.+|++.+++.. .+ ..+..++|+| ++
T Consensus 15 ~~~~~~~~--dG~---------~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~---~l---------~~~~~~~~Sp-Dg 70 (347)
T 2gop_A 15 AYLSDPRT--KGE---------LVAYVLTKANLKDNKYENTIVIENLKNNARR---FI---------ENATMPRISP-DG 70 (347)
T ss_dssp CEEEEEEE--ETT---------EEEEEEEEEETTTTEEEEEEEEEETTTCCEE---EE---------ESCEEEEECT-TS
T ss_pred EEcccceE--CCc---------EEEEEEeecCcccCCccceEEEEeCCCCceE---Ec---------ccCCCeEECC-CC
Confidence 44667777 777 55542 1 3 7999999887432 22 2367899999 99
Q ss_pred CeEEEeeCC---C--cEEEEeCCCccchhhhhccCCceeEEEeC-CCcEEEEEcC-------------------------
Q 038533 140 KRIGTCSID---T--TCTIWDIEKGVVETQLIAHDKEVYDICWG-EARVFASVSA------------------------- 188 (337)
Q Consensus 140 ~~l~~~~~d---g--~i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~------------------------- 188 (337)
+.|+.++.+ + .|.+||+.+++...... +.. +..++|+ +++.|+.++.
T Consensus 71 ~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~-~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 148 (347)
T 2gop_A 71 KKIAFMRANEEKKVSEIWVADLETLSSKKILE-AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFD 148 (347)
T ss_dssp SEEEEEEEETTTTEEEEEEEETTTTEEEEEEE-ESE-EEEEEECTTSSEEEEEEECCCC---------CCCC--------
T ss_pred CEEEEEEeccCCCcceEEEEECCCCceEEEEc-CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCccccc
Confidence 988887654 2 38888988776544333 334 8999999 7888887763
Q ss_pred --CCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecC-------C-EEEEEECCCCCCCeEEeeccc
Q 038533 189 --DGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS-------N-KVVILDIRSPTLPVAELERHR 258 (337)
Q Consensus 189 --dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~-------~-~i~i~d~~~~~~~~~~~~~~~ 258 (337)
...|.+||+.+++....+.. . .+..+.|+| ++ +++++..+. . .|.++| + ++ ...+..+
T Consensus 149 ~~~~~l~~~d~~~~~~~~~l~~----~-~~~~~~~sp-dg-~~~~~~~~~~~~~~~~~~~l~~~d--~-~~-~~~l~~~- 216 (347)
T 2gop_A 149 GEKTTFWIFDTESEEVIEEFEK----P-RFSSGIWHR-DK-IVVNVPHREIIPQYFKFWDIYIWE--D-GK-EEKMFEK- 216 (347)
T ss_dssp -CEEEEEEEETTTTEEEEEEEE----E-TTCEEEEET-TE-EEEEEECCCSSCCSSCCEEEEEEE--T-TE-EEEEEEE-
T ss_pred CccceEEEEECCCCeEEeeecC----C-CcccccCCC-Ce-EEEEEecccccccccccccEEEeC--C-Cc-eEEeccC-
Confidence 25799999988764233322 2 678999999 88 777665542 2 255555 3 33 3444444
Q ss_pred ceeeEEEeCCCCCCeEEEEcCC--------CcEEEEeCCCCCCCCCCCCCceeeeeCCCceeE-EEEccCCCceEEEEcC
Q 038533 259 ACVNAIAWAPQSRRHICSVGDD--------SQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQ-LQWSPAQPDWLAIAFS 329 (337)
Q Consensus 259 ~~v~~~~~~~~~~~~l~~~~~d--------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~d 329 (337)
..+..+ +|+|+ .|+.++.+ ..|.+|| . . ........+...+.. +.|+ ++ .+++++.+
T Consensus 217 ~~~~~~--spdg~-~l~~~~~~~~~~~~~~~~l~~~d-~--~------~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~ 282 (347)
T 2gop_A 217 VSFYAV--DSDGE-RILLYGKPEKKYMSEHNKLYIYD-G--K------EVMGILDEVDRGVGQAKIKD-GK-VYFTLFEE 282 (347)
T ss_dssp ESEEEE--EECSS-CEEEEECCSSSCCCSSCEEEEEC-S--S------CEEESSTTCCSEEEEEEEET-TE-EEEEEEET
T ss_pred cceeeE--CCCCC-EEEEEEccccCCccccceEEEEC-C--C------ceEeccccCCcccCCccEEc-Cc-EEEEEecC
Confidence 444444 99999 66655533 3677777 3 1 111122345667886 9999 88 77778889
Q ss_pred CcEEEE
Q 038533 330 NKMQLL 335 (337)
Q Consensus 330 ~~i~iw 335 (337)
+.++||
T Consensus 283 ~~~~l~ 288 (347)
T 2gop_A 283 GSVNLY 288 (347)
T ss_dssp TEEEEE
T ss_pred CcEEEE
Confidence 999998
No 199
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.59 E-value=5.2e-14 Score=118.37 Aligned_cols=171 Identities=10% Similarity=0.049 Sum_probs=130.6
Q ss_pred CCeEEEecCCCCcccCcCCccEEEEeCC-eEEEEecCCCC---------ccceeeecCCCCCcccCCeeEEEeecCCCCe
Q 038533 72 PPTKLMFDPNSSSRKSSSNRHLLASSGD-FLRLWDVGDSS---------IEPVAVLNNSKSSEFCAPLTSFDWNEIEPKR 141 (337)
Q Consensus 72 ~i~~i~~~~~~~~~~~~~~~~~l~~~~~-~v~vw~~~~~~---------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 141 (337)
+++.+++++... ++++|+. .+++|++...+ .+...... +. . |+.++| +++.
T Consensus 39 ~~nlLais~~~g---------ll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~-lp-----~-V~~l~f---d~~~ 99 (388)
T 1xip_A 39 SLQNLDISNSKS---------LFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKE-IP-----D-VIFVCF---HGDQ 99 (388)
T ss_dssp CCBCEEEETTTT---------EEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEE-CT-----T-EEEEEE---ETTE
T ss_pred cccEEEEcCCCC---------EEEEeCCCEEEEEEhhHhhhhhccccccccceEEee-CC-----C-eeEEEE---CCCE
Confidence 689999999998 8888875 88889976442 12222222 33 6 999999 6788
Q ss_pred EEEeeCCCcEEEEeCCCccchhhhhccCCceeEEEeCCCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEe
Q 038533 142 IGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAW 221 (337)
Q Consensus 142 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~ 221 (337)
|+++ .++.|++||+.+.........|...+.++.+.+.+ +++++.||.|.+||+.+..... ....+.|++|
T Consensus 100 L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~-~av~~~dG~L~v~dl~~~~~~~-------~~~~Vs~v~W 170 (388)
T 1xip_A 100 VLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNT-LVILNSVNDLSALDLRTKSTKQ-------LAQNVTSFDV 170 (388)
T ss_dssp EEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSSE-EEEEETTSEEEEEETTTCCEEE-------EEESEEEEEE
T ss_pred EEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCCC-EEEEECCCCEEEEEccCCcccc-------ccCCceEEEE
Confidence 8888 88999999998766555566777888888888433 8889999999999999776432 1358999999
Q ss_pred ecCCCcEEEEEEecCCEEEEEECCCCCCC--eEEe------e---cccceeeEEEeCCCCCCeEEE
Q 038533 222 NKQDLRYMATILMDSNKVVILDIRSPTLP--VAEL------E---RHRACVNAIAWAPQSRRHICS 276 (337)
Q Consensus 222 ~~~~~~~l~~~~~d~~~i~i~d~~~~~~~--~~~~------~---~~~~~v~~~~~~~~~~~~l~~ 276 (337)
+| .| ++.+..|+. +++|+... ... ..++ . +|...|.++.|.+++. ++++
T Consensus 171 Sp-kG--~~vg~~dg~-i~~~~~~~-~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~-flv~ 230 (388)
T 1xip_A 171 TN-SQ--LAVLLKDRS-FQSFAWRN-GEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQD-FLAV 230 (388)
T ss_dssp CS-SE--EEEEETTSC-EEEEEEET-TEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSE-EEEE
T ss_pred cC-Cc--eEEEEcCCc-EEEEcCCC-ccccccceecCCcccccccCCCeeEEEEEEecCCe-EEEE
Confidence 99 77 678889998 99998875 322 3344 2 3678999999999988 6665
No 200
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.59 E-value=2.9e-13 Score=125.39 Aligned_cols=274 Identities=11% Similarity=0.047 Sum_probs=166.7
Q ss_pred cceEEEeeeeccCcceEEEEEecCC---Ccceec--C-CCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-----C
Q 038533 31 GQRIAVGSFIEDYTNRVDVVSFEPE---SLSIKT--H-PSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-----D 99 (337)
Q Consensus 31 ~~~la~g~~~~~~d~~i~i~~~~~~---~~~~~~--~-~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-----~ 99 (337)
|++++......+ ...-.||..+.. ...... . ..+..+|...+..++||||++ +||.+. +
T Consensus 118 G~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~---------~la~~~~~~G~e 187 (741)
T 1yr2_A 118 GASVFYSWNSGL-MNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGR---------LLAYSVQDGGSD 187 (741)
T ss_dssp TTEEEEEEECSS-CSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSS---------EEEEEEEETTCS
T ss_pred CCEEEEEEEcCC-CeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCC---------EEEEEEcCCCCc
Confidence 888887765111 113566766543 222111 0 012234445688999999999 777643 2
Q ss_pred --eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCc--------------EEEEeCCCccc--
Q 038533 100 --FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTT--------------CTIWDIEKGVV-- 161 (337)
Q Consensus 100 --~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~--------------i~v~d~~~~~~-- 161 (337)
.|++||+.+++. +.. ..+. ..+..++|+| + +.|+.++.++. |++|++.++..
T Consensus 188 ~~~i~v~dl~tg~~--~~~-~~~~-----~~~~~~~wsp-D-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~ 257 (741)
T 1yr2_A 188 WRTVKFVGVADGKP--LAD-ELKW-----VKFSGLAWLG-N-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSAD 257 (741)
T ss_dssp EEEEEEEETTTCCE--EEE-EEEE-----EESCCCEEST-T-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGC
T ss_pred eEEEEEEECCCCCC--CCc-cCCC-----ceeccEEEEC-C-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhC
Confidence 699999999853 222 1111 2245789999 8 88888776654 89999877653
Q ss_pred --hhhhhccCCceeEEEeC-CCcEEEEEcCCC-----eEEEEECCCC--CCceeeecCCCCCCCceEEEeecCCCcEEEE
Q 038533 162 --ETQLIAHDKEVYDICWG-EARVFASVSADG-----SVRIFDLRDK--EHSTIIYESPQPDTPLLRLAWNKQDLRYMAT 231 (337)
Q Consensus 162 --~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg-----~i~iwd~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 231 (337)
+.....+...+..+.|+ ++++|+..+.++ .|.+||+.++ +....+... ........ +| +++.|+.
T Consensus 258 ~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~---~~~~~~~~-~~-dg~~l~~ 332 (741)
T 1yr2_A 258 QPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPD---LKAQWDFV-DG-VGDQLWF 332 (741)
T ss_dssp EEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECS---SSSCEEEE-EE-ETTEEEE
T ss_pred EEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCC---CCceEEEE-ec-cCCEEEE
Confidence 22222233458899999 788888776543 8999999876 312333322 23344443 46 7887777
Q ss_pred EEecC---CEEEEEECCCCC-CCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeee-
Q 038533 232 ILMDS---NKVVILDIRSPT-LPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYS- 306 (337)
Q Consensus 232 ~~~d~---~~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~- 306 (337)
.+.++ ..|.+||+.++. .....+..+...+..+.|. ++. ++++...|+..+||.++... .....+..
T Consensus 333 ~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~-lv~~~~~dg~~~l~~~~~~g------~~~~~l~~~ 404 (741)
T 1yr2_A 333 VSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNR-LFASYIHDAKSQVLAFDLDG------KPAGAVSLP 404 (741)
T ss_dssp EECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTE-EEEEEEETTEEEEEEEETTS------CEEEECBCS
T ss_pred EECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCE-EEEEEEECCEEEEEEEeCCC------CceeeccCC
Confidence 76532 249999987631 2233344445567777887 444 88888899988888665211 11222222
Q ss_pred CCCceeEEEEccCCCceEEEE----cCCcEEEEeC
Q 038533 307 AGSEINQLQWSPAQPDWLAIA----FSNKMQLLKV 337 (337)
Q Consensus 307 ~~~~v~~~~~~~~~~~l~~~~----~d~~i~iw~l 337 (337)
....+..++++|+++.++... ..+.|.+|++
T Consensus 405 ~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 439 (741)
T 1yr2_A 405 GIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDP 439 (741)
T ss_dssp SSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEET
T ss_pred CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 356789999999987776432 2477888874
No 201
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.53 E-value=1.5e-11 Score=101.77 Aligned_cols=245 Identities=9% Similarity=0.072 Sum_probs=155.8
Q ss_pred CCceeEEEEe--cceEEE-------eeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCC-CCcccCcCC
Q 038533 21 PYPLYAMAVC--GQRIAV-------GSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPN-SSSRKSSSN 90 (337)
Q Consensus 21 ~~~v~~~~~s--~~~la~-------g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~-~~~~~~~~~ 90 (337)
-....+++|+ +.++++ +.. ++.|.+|+............. ..++...+.+++++++ +.
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~----~~~i~~~d~~~g~~~~~~~~~-~~~~~~~~~~i~~~~~~g~------- 84 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKP----AGEILRIDLKTGKKTVICKPE-VNGYGGIPAGCQCDRDANQ------- 84 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEE----CCEEEEECTTTCCEEEEECCE-ETTEECCEEEEEECSSSSE-------
T ss_pred CCCccCceECCCCCEEEEEeccccCCCC----CCEEEEEeCCCCcEEEEEecc-cCCCCCCCceEEEecCCCc-------
Confidence 3456889998 666666 454 788888765433322111000 0124467899999999 76
Q ss_pred ccEEEEeCC-eEEEEecCCCCccceee-ecCCCCCcccCCeeEEEeecCCCCeEEEeeCC---------------CcEEE
Q 038533 91 RHLLASSGD-FLRLWDVGDSSIEPVAV-LNNSKSSEFCAPLTSFDWNEIEPKRIGTCSID---------------TTCTI 153 (337)
Q Consensus 91 ~~~l~~~~~-~v~vw~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d---------------g~i~v 153 (337)
++++..+ .|.+||.. ++.. .. ..... ......+.++++++ +++++++...+ +.|..
T Consensus 85 --l~v~~~~~~l~~~d~~-g~~~--~~~~~~~~-~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~ 157 (314)
T 1pjx_A 85 --LFVADMRLGLLVVQTD-GTFE--EIAKKDSE-GRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYC 157 (314)
T ss_dssp --EEEEETTTEEEEEETT-SCEE--ECCSBCTT-SCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEE
T ss_pred --EEEEECCCCEEEEeCC-CCEE--EEEeccCC-CccccCCcCEEECC-CCCEEEEecCcccccccccccccCCCCeEEE
Confidence 7777765 89999988 6422 21 11111 01114578999998 88888777655 56777
Q ss_pred EeCCCccchhhhhccCCceeEEEeC----CCc-EE-EEEcCCCeEEEEECC-CCCCc--eeeecCCCCC-CCceEEEeec
Q 038533 154 WDIEKGVVETQLIAHDKEVYDICWG----EAR-VF-ASVSADGSVRIFDLR-DKEHS--TIIYESPQPD-TPLLRLAWNK 223 (337)
Q Consensus 154 ~d~~~~~~~~~~~~~~~~v~~~~~~----~~~-~l-~~~~~dg~i~iwd~~-~~~~~--~~~~~~~~~~-~~i~~~~~~~ 223 (337)
+|.. ++... +..+......++++ +.. .+ ++...++.|.+||+. .++.. ........+. .....+++++
T Consensus 158 ~~~~-g~~~~-~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~ 235 (314)
T 1pjx_A 158 FTTD-GQMIQ-VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDE 235 (314)
T ss_dssp ECTT-SCEEE-EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBT
T ss_pred ECCC-CCEEE-eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECC
Confidence 7765 44322 22233456778887 543 44 444668899999986 33211 1222222222 4578899998
Q ss_pred CCCcEEEEEEecCCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCC
Q 038533 224 QDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 224 ~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 289 (337)
+++++++...++. |.+||..+ ++.+..+..+...+.+++|+|+++.++++...++.|..|++.
T Consensus 236 -~G~l~v~~~~~~~-i~~~d~~~-g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 236 -DNNLLVANWGSSH-IEVFGPDG-GQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp -TCCEEEEEETTTE-EEEECTTC-BSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred -CCCEEEEEcCCCE-EEEEcCCC-CcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 8887777666776 99999875 344566666667889999999997344555567899999987
No 202
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.51 E-value=7.6e-12 Score=101.48 Aligned_cols=211 Identities=11% Similarity=0.011 Sum_probs=147.9
Q ss_pred cEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhcc-
Q 038533 92 HLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAH- 168 (337)
Q Consensus 92 ~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~- 168 (337)
++|++++ + .|.+||.+++ +.+..+..+.. ..+.++++.| +++++++ .++.|..||. +++.+..+..+
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG--~~~w~~~~~~~----~~~~~~~~~p-dG~ilvs--~~~~V~~~d~-~G~~~W~~~~~~ 75 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTK--EIVWEYPLEKG----WECNSVAATK-AGEILFS--YSKGAKMITR-DGRELWNIAAPA 75 (276)
T ss_dssp EEEEECTTCSEEEEEETTTT--EEEEEEECCTT----CCCCEEEECT-TSCEEEE--CBSEEEEECT-TSCEEEEEECCT
T ss_pred cEEEeeCCCCEEEEEECCCC--eEEEEeCCCcc----CCCcCeEECC-CCCEEEe--CCCCEEEECC-CCCEEEEEcCCC
Confidence 3777777 4 9999999898 56777766420 2577899998 9998883 4678999998 88888777754
Q ss_pred CCceeEEEeC-CCcEEEEEcC-CCeEEEEECCCCCCceeeecCC---CCCCCceEEEeecCCCcEEEEEEecCCEEEEEE
Q 038533 169 DKEVYDICWG-EARVFASVSA-DGSVRIFDLRDKEHSTIIYESP---QPDTPLLRLAWNKQDLRYMATILMDSNKVVILD 243 (337)
Q Consensus 169 ~~~v~~~~~~-~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d 243 (337)
...+.++.+. +++.+++.+. ++.+..+|. .++......... .+......+.+.+ +++++++...++. |..||
T Consensus 76 ~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~-~G~~lv~~~~~~~-v~~~d 152 (276)
T 3no2_A 76 GCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNK-KGNYLVPLFATSE-VREIA 152 (276)
T ss_dssp TCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECT-TSCEEEEETTTTE-EEEEC
T ss_pred CccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECC-CCCEEEEecCCCE-EEEEC
Confidence 3468888888 7888888877 778888886 444333322110 1112344567777 8999998887887 99999
Q ss_pred CCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeC------CCceeEEEEc
Q 038533 244 IRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSA------GSEINQLQWS 317 (337)
Q Consensus 244 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~ 317 (337)
.. ++.+.++... ..+.++...+++. ++++++.+++|..+|...++ ..-.+..+ -..+..++..
T Consensus 153 ~~--G~~~w~~~~~-~~~~~~~~~~~g~-~~v~~~~~~~v~~~d~~tG~-------~~w~~~~~~~~~~~l~~~~~~~~~ 221 (276)
T 3no2_A 153 PN--GQLLNSVKLS-GTPFSSAFLDNGD-CLVACGDAHCFVQLNLESNR-------IVRRVNANDIEGVQLFFVAQLFPL 221 (276)
T ss_dssp TT--SCEEEEEECS-SCCCEEEECTTSC-EEEECBTTSEEEEECTTTCC-------EEEEEEGGGSBSCCCSEEEEEEEC
T ss_pred CC--CCEEEEEECC-CCccceeEcCCCC-EEEEeCCCCeEEEEeCcCCc-------EEEEecCCCCCCccccccccceEc
Confidence 86 5567777654 4566788899998 88888888889999987332 11122211 1236788888
Q ss_pred cCCCceEEE
Q 038533 318 PAQPDWLAI 326 (337)
Q Consensus 318 ~~~~~l~~~ 326 (337)
++|..+++.
T Consensus 222 ~~G~i~v~~ 230 (276)
T 3no2_A 222 QNGGLYICN 230 (276)
T ss_dssp TTSCEEEEE
T ss_pred CCCCEEEEe
Confidence 888655554
No 203
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.50 E-value=7.4e-11 Score=96.75 Aligned_cols=234 Identities=8% Similarity=-0.032 Sum_probs=156.4
Q ss_pred CCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeC
Q 038533 70 PYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSI 147 (337)
Q Consensus 70 ~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~ 147 (337)
...+.++.+.+++. ++++.. + .|.+|+.. ++... ..+.... ..+.++++.+ +++++++...
T Consensus 19 ~~~p~~i~~d~~g~---------l~v~~~~~~~v~~~~~~-~~~~~-~~~~~~~-----~~~~~i~~~~-~g~l~v~~~~ 81 (300)
T 2qc5_A 19 DSGPYGITSSEDGK---------VWFTQHKANKISSLDQS-GRIKE-FEVPTPD-----AKVMCLIVSS-LGDIWFTENG 81 (300)
T ss_dssp TCCEEEEEECTTSC---------EEEEETTTTEEEEECTT-SCEEE-EECSSTT-----CCEEEEEECT-TSCEEEEETT
T ss_pred CCCcceeeECCCCC---------EEEEcCCCCeEEEECCC-CceEE-EECCCCC-----CcceeEEECC-CCCEEEEecC
Confidence 45678999999998 777765 4 99999988 53222 1222222 5688999987 8888887776
Q ss_pred CCcEEEEeCCCccchh-hhhccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCC
Q 038533 148 DTTCTIWDIEKGVVET-QLIAHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQD 225 (337)
Q Consensus 148 dg~i~v~d~~~~~~~~-~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 225 (337)
++.|..+|.. ++... ........+.+++++ +++++++...++.|..+|.. ++..... .......+..+++++ +
T Consensus 82 ~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~--~~~~~~~~~~i~~d~-~ 156 (300)
T 2qc5_A 82 ANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYD--LPNKGSYPAFITLGS-D 156 (300)
T ss_dssp TTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEE--CSSTTCCEEEEEECT-T
T ss_pred CCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEcc--CCCCCCCceeEEECC-C
Confidence 8899999987 54321 122234568899998 67777777778899999987 4432221 212345788999998 7
Q ss_pred CcEEEEEEecCCEEEEEECCCCCCCeE-EeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceee
Q 038533 226 LRYMATILMDSNKVVILDIRSPTLPVA-ELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSM 304 (337)
Q Consensus 226 ~~~l~~~~~d~~~i~i~d~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~ 304 (337)
+++.++...++. |..+|. . +.... ....+...+..+++.+++. ++++....+.|.+|+.. +.. .....
T Consensus 157 g~l~v~~~~~~~-i~~~~~-~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~~-g~~------~~~~~ 225 (300)
T 2qc5_A 157 NALWFTENQNNS-IGRITN-T-GKLEEYPLPTNAAAPVGITSGNDGA-LWFVEIMGNKIGRITTT-GEI------SEYDI 225 (300)
T ss_dssp SSEEEEETTTTE-EEEECT-T-CCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECTT-CCE------EEEEC
T ss_pred CCEEEEecCCCe-EEEECC-C-CcEEEeeCCCCCCCcceEEECCCCC-EEEEccCCCEEEEEcCC-CcE------EEEEC
Confidence 775555444555 999998 3 33222 1223345688999999987 77777777889999874 110 01112
Q ss_pred eeCCCceeEEEEccCCCceEEEEcCCcEEEEe
Q 038533 305 YSAGSEINQLQWSPAQPDWLAIAFSNKMQLLK 336 (337)
Q Consensus 305 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~ 336 (337)
......+.++++.++|..+++...++.|..|+
T Consensus 226 ~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 257 (300)
T 2qc5_A 226 PTPNARPHAITAGKNSEIWFTEWGANQIGRIT 257 (300)
T ss_dssp SSTTCCEEEEEECSTTCEEEEETTTTEEEEEC
T ss_pred CCCCCCceEEEECCCCCEEEeccCCCeEEEEC
Confidence 23456689999999997555544568888775
No 204
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.49 E-value=5.3e-13 Score=112.30 Aligned_cols=176 Identities=13% Similarity=0.100 Sum_probs=127.5
Q ss_pred ceeEEEEe--cceEEEeeeeccCcceEEEEEecCCC-------cceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccE
Q 038533 23 PLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPES-------LSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHL 93 (337)
Q Consensus 23 ~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~-------~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~ 93 (337)
+++.++++ .++|++|+ ...+.+|+++.-. +.+.. .....+.. |++++| ++. +
T Consensus 39 ~~nlLais~~~gll~a~~-----~~~l~v~~~~~l~~~~~~~~~~~~~--~~~~~lp~-V~~l~f--d~~---------~ 99 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAAS-----GSKAVVGELQLLRDHITSDSTPLTF--KWEKEIPD-VIFVCF--HGD---------Q 99 (388)
T ss_dssp CCBCEEEETTTTEEEEEE-----TTEEEEEEHHHHHHHHHSSSCCCCC--SEEEECTT-EEEEEE--ETT---------E
T ss_pred cccEEEEcCCCCEEEEeC-----CCEEEEEEhhHhhhhhccccccccc--eEEeeCCC-eeEEEE--CCC---------E
Confidence 69999999 78888888 4567779865322 11111 12245667 999999 777 8
Q ss_pred EEEeCC-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCce
Q 038533 94 LASSGD-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEV 172 (337)
Q Consensus 94 l~~~~~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v 172 (337)
|+++.+ .|++||+.+.. .......++ .++.++.+.+ . .+++++.||.|.+||+.++.... +...|
T Consensus 100 L~v~~~~~l~v~dv~sl~--~~~~~~~~~-----~~v~~i~~~~-p--~~av~~~dG~L~v~dl~~~~~~~----~~~~V 165 (388)
T 1xip_A 100 VLVSTRNALYSLDLEELS--EFRTVTSFE-----KPVFQLKNVN-N--TLVILNSVNDLSALDLRTKSTKQ----LAQNV 165 (388)
T ss_dssp EEEEESSEEEEEESSSTT--CEEEEEECS-----SCEEEEEECS-S--EEEEEETTSEEEEEETTTCCEEE----EEESE
T ss_pred EEEEcCCcEEEEEchhhh--ccCccceee-----cceeeEEecC-C--CEEEEECCCCEEEEEccCCcccc----ccCCc
Confidence 888766 99999998873 344455555 6788887765 2 38888999999999998776532 45689
Q ss_pred eEEEeCCCcEEEEEcCCCeEEEEECCCCCC--ceeee------cCCCCCCCceEEEeecCCCcEEEEEE
Q 038533 173 YDICWGEARVFASVSADGSVRIFDLRDKEH--STIIY------ESPQPDTPLLRLAWNKQDLRYMATIL 233 (337)
Q Consensus 173 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~------~~~~~~~~i~~~~~~~~~~~~l~~~~ 233 (337)
.+++|++.. ++.|..||.+++|+....+. ...+. ....+...+.++.|.+ ++.++++-.
T Consensus 166 s~v~WSpkG-~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~-~~~flv~y~ 232 (388)
T 1xip_A 166 TSFDVTNSQ-LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILS-PQDFLAVFG 232 (388)
T ss_dssp EEEEECSSE-EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESS-SSEEEEEEE
T ss_pred eEEEEcCCc-eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEec-CCeEEEEEc
Confidence 999999544 78899999999999887663 22221 1112567899999998 888887744
No 205
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.47 E-value=5.2e-11 Score=97.85 Aligned_cols=224 Identities=12% Similarity=0.087 Sum_probs=142.0
Q ss_pred CeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCc
Q 038533 73 PTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTT 150 (337)
Q Consensus 73 i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~ 150 (337)
..+..|+|++. .++++.. + .|..||..+++. ..+.. . ..+.++++++ +++++++ . ++.
T Consensus 15 ~Egp~w~~~~~--------~l~~~d~~~~~i~~~d~~~~~~---~~~~~-~-----~~~~~i~~~~-dG~l~v~-~-~~~ 74 (297)
T 3g4e_A 15 GESPVWEEVSN--------SLLFVDIPAKKVCRWDSFTKQV---QRVTM-D-----APVSSVALRQ-SGGYVAT-I-GTK 74 (297)
T ss_dssp EEEEEEETTTT--------EEEEEETTTTEEEEEETTTCCE---EEEEC-S-----SCEEEEEEBT-TSSEEEE-E-TTE
T ss_pred ccCCeEECCCC--------EEEEEECCCCEEEEEECCCCcE---EEEeC-C-----CceEEEEECC-CCCEEEE-E-CCe
Confidence 45788999655 3666665 3 999999988742 22222 2 6789999998 8885554 4 568
Q ss_pred EEEEeCCCccchhhhhc----cCCceeEEEeC-CCcEEEEEcC---------CCeEEEEECCCCCCceeeecCCCCCCCc
Q 038533 151 CTIWDIEKGVVETQLIA----HDKEVYDICWG-EARVFASVSA---------DGSVRIFDLRDKEHSTIIYESPQPDTPL 216 (337)
Q Consensus 151 i~v~d~~~~~~~~~~~~----~~~~v~~~~~~-~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~i 216 (337)
|.+||.++++....... ....+++++++ +++++++... ...-.+|.+............ ....
T Consensus 75 l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~---~~~p 151 (297)
T 3g4e_A 75 FCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQ---VDIS 151 (297)
T ss_dssp EEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEE---ESBE
T ss_pred EEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeec---cccc
Confidence 99999987763221111 12357889999 6776654422 122344444432222222211 2345
Q ss_pred eEEEeecCCCcEEEEEEecCCEEEEEECC-CCCCC-----eEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCC
Q 038533 217 LRLAWNKQDLRYMATILMDSNKVVILDIR-SPTLP-----VAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPL 290 (337)
Q Consensus 217 ~~~~~~~~~~~~l~~~~~d~~~i~i~d~~-~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 290 (337)
..++|+| +++.|+.+......|.+||+. ..+.. +..+..+...+..+++.++|. +.++....+.|..||...
T Consensus 152 ngi~~sp-dg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~-lwva~~~~~~v~~~d~~t 229 (297)
T 3g4e_A 152 NGLDWSL-DHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK-LWVACYNGGRVIRLDPVT 229 (297)
T ss_dssp EEEEECT-TSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC-EEEEEETTTEEEEECTTT
T ss_pred cceEEcC-CCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC-EEEEEcCCCEEEEEcCCC
Confidence 7899999 888776665544449999974 21321 122233345778999999997 777777788899999872
Q ss_pred CCCCCCCCCCceeeeeCCCceeEEEEc-cCCCceEEEEc
Q 038533 291 PPVAGPNGIDPMSMYSAGSEINQLQWS-PAQPDWLAIAF 328 (337)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~ 328 (337)
++ ....+..+...+++++|. |+++.|+.++.
T Consensus 230 G~-------~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 230 GK-------RLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp CC-------EEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred ce-------EEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 22 223444455679999998 88877766553
No 206
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.47 E-value=7e-10 Score=93.87 Aligned_cols=256 Identities=11% Similarity=0.045 Sum_probs=152.5
Q ss_pred eEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-----------C-eEEEEecCCCCccc
Q 038533 46 RVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-----------D-FLRLWDVGDSSIEP 113 (337)
Q Consensus 46 ~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-----------~-~v~vw~~~~~~~~~ 113 (337)
.|.++|..... ... .+..+ ..- .++++||++ .+..+. + .|.+||..+.+ .
T Consensus 48 ~v~v~D~~t~~--~~~--~i~~g--~~p-~i~~spDg~---------~lyv~n~~~~~~~rg~~~~~v~viD~~t~~--~ 109 (373)
T 2mad_H 48 QQWVLDAGSGS--ILG--HVNGG--FLP-NPVAAHSGS---------EFALASTSFSRIAKGKRTDYVEVFDPVTFL--P 109 (373)
T ss_pred EEEEEECCCCe--EEE--EecCC--CCC-CeEECCCCC---------EEEEEeccccccccCCCCCeEEEEECCCCc--E
Confidence 67777765433 222 12122 223 999999999 555542 3 79999998873 4
Q ss_pred eeeecCC--CCCcccCCeeEEEeecCCCCeEEEeeC--CCcEEEEeCCCccchhh-hhccCCceeEEEeC--CCcEEEEE
Q 038533 114 VAVLNNS--KSSEFCAPLTSFDWNEIEPKRIGTCSI--DTTCTIWDIEKGVVETQ-LIAHDKEVYDICWG--EARVFASV 186 (337)
Q Consensus 114 ~~~~~~~--~~~~~~~~i~~~~~~~~~~~~l~~~~~--dg~i~v~d~~~~~~~~~-~~~~~~~v~~~~~~--~~~~l~~~ 186 (337)
...+... ...........++|+| ++++|+++.. ++.|.++| .+++.+.. +.. ... +.+. ..+.+++.
T Consensus 110 ~~~i~~~~~~~~~~g~~p~~~~~sp-DG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~-~~~---~~~~~~~~~~~~~~ 183 (373)
T 2mad_H 110 IADIELPDAPRFDVGPYSWMNANTP-NNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS-PTC---YHIHPGAPSTFYLL 183 (373)
T ss_pred EEEEECCCccccccCCCccceEECC-CCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC-Cce---EEEEeCCCceEEEE
Confidence 4433221 0000002244789999 9999998874 57899999 99987766 542 222 2232 34567778
Q ss_pred cCCCeEEEEECCCCCCceeeec--CCCCCCC-ceEEEeecCCCcEEEEEEecCCEEEEEECCCCC-CCeEEeec------
Q 038533 187 SADGSVRIFDLRDKEHSTIIYE--SPQPDTP-LLRLAWNKQDLRYMATILMDSNKVVILDIRSPT-LPVAELER------ 256 (337)
Q Consensus 187 ~~dg~i~iwd~~~~~~~~~~~~--~~~~~~~-i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~-~~~~~~~~------ 256 (337)
+.||.+.++|. +++....... ......+ .....+.+ ++..++..+..+. +.+.|+.... ..+..+..
T Consensus 184 ~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~-v~vid~~~~~~~v~~~~~~~~~~~~ 260 (373)
T 2mad_H 184 CAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQAN-KSGRIVWPVYSGK-ILQADISAAGATNKAPIDALSGGRK 260 (373)
T ss_pred cCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEe-cCCEEEEEcCCce-EEEEeccCCcceEeeeeeecCCccc
Confidence 88999999999 7664422210 0001122 22345666 4444444445666 9999987532 11122211
Q ss_pred ----ccceeeEEEeCCCCCCeEEEEcC----------CCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCC-
Q 038533 257 ----HRACVNAIAWAPQSRRHICSVGD----------DSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQP- 321 (337)
Q Consensus 257 ----~~~~v~~~~~~~~~~~~l~~~~~----------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~- 321 (337)
.......+.++|+++ .++++.. .+.|.++|+. +.. .............++|+|||+
T Consensus 261 ~~~~~p~g~~~~~~s~d~~-~lyV~~~~~~~~~~~~~~~~V~VID~~--t~~------vv~~i~~g~~p~~i~~s~Dg~~ 331 (373)
T 2mad_H 261 ADTWRPGGWQQVAYLKSSD-GIYLLTSEQSAWKLHAAAKEVTSVTGL--VGQ------TSSQISLGHDVDAISVAQDGGP 331 (373)
T ss_pred ccceecCceEeEEECCCCC-EEEEEeccCCcccccCCCCeEEEEECC--CCE------EEEEEECCCCcCeEEECCCCCe
Confidence 012234478899988 5555432 3579999998 311 222223444689999999998
Q ss_pred ceEEEE-cCCcEEEEeC
Q 038533 322 DWLAIA-FSNKMQLLKV 337 (337)
Q Consensus 322 ~l~~~~-~d~~i~iw~l 337 (337)
.++++. .++.|.++|+
T Consensus 332 ~l~v~~~~~~~V~ViD~ 348 (373)
T 2mad_H 332 DLYALSAGTEVLHIYDA 348 (373)
T ss_pred EEEEEcCCCCeEEEEEC
Confidence 666766 4899999974
No 207
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.46 E-value=1.7e-11 Score=113.52 Aligned_cols=245 Identities=15% Similarity=0.084 Sum_probs=151.9
Q ss_pred CceeEEEEe--cceEEEeeeeccC-cceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC
Q 038533 22 YPLYAMAVC--GQRIAVGSFIEDY-TNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG 98 (337)
Q Consensus 22 ~~v~~~~~s--~~~la~g~~~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~ 98 (337)
..+..++|| |++||.+....+. ...|++|+++.... .. . ..+...+..++|+|| + .++.+..
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~--~~--~--~~~~~~~~~~~wspD-~--------~l~~~~~ 227 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKP--LA--D--ELKWVKFSGLAWLGN-D--------ALLYSRF 227 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCE--EE--E--EEEEEESCCCEESTT-S--------EEEEEEC
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCC--CC--c--cCCCceeccEEEECC-C--------EEEEEEe
Confidence 367889999 8999988762221 14688877765432 21 0 111222467899999 8 2444433
Q ss_pred C---------------eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCC-----cEEEEeCCC
Q 038533 99 D---------------FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDT-----TCTIWDIEK 158 (337)
Q Consensus 99 ~---------------~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg-----~i~v~d~~~ 158 (337)
+ .|.+|++.++.......+.... ....+..+.|+| ++++|+..+.++ .|++||+.+
T Consensus 228 ~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~---~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~l~~~d~~~ 303 (741)
T 1yr2_A 228 AEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPE---LPKRGHGASVSS-DGRWVVITSSEGTDPVNTVHVARVTN 303 (741)
T ss_dssp CCC--------CCCCCEEEEEETTSCGGGCEEEECCTT---CTTCEEEEEECT-TSCEEEEEEECTTCSCCEEEEEEEET
T ss_pred cCcccccccccCCCCCEEEEEECCCCchhCEEEeccCC---CCeEEEEEEECC-CCCEEEEEEEccCCCcceEEEEECCC
Confidence 3 3899999877432233333321 003478999999 999888777544 899999987
Q ss_pred c--cchhhhhccCCceeEEEeCCCcEEEEEcC----CCeEEEEECCCCC-CceeeecCCCCCCCceEEEeecCCCcEEEE
Q 038533 159 G--VVETQLIAHDKEVYDICWGEARVFASVSA----DGSVRIFDLRDKE-HSTIIYESPQPDTPLLRLAWNKQDLRYMAT 231 (337)
Q Consensus 159 ~--~~~~~~~~~~~~v~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 231 (337)
+ +....+..+...+....+.+++.|+..+. ++.|.+||+.++. ....+.. .+...+..+.|. ++.++++
T Consensus 304 ~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~--~~~~~l~~~~~~--~~~lv~~ 379 (741)
T 1yr2_A 304 GKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVP--ESKDNLESVGIA--GNRLFAS 379 (741)
T ss_dssp TEECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEEC--CCSSEEEEEEEE--BTEEEEE
T ss_pred CCCcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEec--CCCCeEEEEEEE--CCEEEEE
Confidence 6 31444444544455444446777777665 3459999998752 2233332 233456677776 5667777
Q ss_pred EEecCCEEEEEECCCCCCCeEEeec-ccceeeEEEeCCCCCCeEEEEc---CCCcEEEEeCCC
Q 038533 232 ILMDSNKVVILDIRSPTLPVAELER-HRACVNAIAWAPQSRRHICSVG---DDSQAFIWELPL 290 (337)
Q Consensus 232 ~~~d~~~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~---~dg~i~iw~~~~ 290 (337)
...++. .++|.+...+.....+.. +...+..+.++|+++.++++.+ ..+.|.+||+..
T Consensus 380 ~~~dg~-~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 441 (741)
T 1yr2_A 380 YIHDAK-SQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPAT 441 (741)
T ss_dssp EEETTE-EEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTT
T ss_pred EEECCE-EEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 777776 666654422444555543 3567889999999874444433 347899999873
No 208
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.45 E-value=6.7e-11 Score=97.18 Aligned_cols=231 Identities=9% Similarity=0.051 Sum_probs=145.2
Q ss_pred CceeEEEEe---cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC
Q 038533 22 YPLYAMAVC---GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG 98 (337)
Q Consensus 22 ~~v~~~~~s---~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~ 98 (337)
.-..+..|+ +.++++... ++.|..|+.+... ... ......+.++++++++. ++++..
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~----~~~i~~~d~~~~~--~~~-----~~~~~~~~~i~~~~dG~---------l~v~~~ 72 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIP----AKKVCRWDSFTKQ--VQR-----VTMDAPVSSVALRQSGG---------YVATIG 72 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETT----TTEEEEEETTTCC--EEE-----EECSSCEEEEEEBTTSS---------EEEEET
T ss_pred ccccCCeEECCCCEEEEEECC----CCEEEEEECCCCc--EEE-----EeCCCceEEEEECCCCC---------EEEEEC
Confidence 345677888 445555543 7888887766433 222 23456799999999998 887765
Q ss_pred CeEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCC---------CcEEEEeCCCccchhhhhccC
Q 038533 99 DFLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSID---------TTCTIWDIEKGVVETQLIAHD 169 (337)
Q Consensus 99 ~~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d---------g~i~v~d~~~~~~~~~~~~~~ 169 (337)
+.|.+||..+++.+.+....... ....+.+++++| +++++++.... ..-.+|.+........+....
T Consensus 73 ~~l~~~d~~~g~~~~~~~~~~~~---~~~~~~di~~d~-dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~ 148 (297)
T 3g4e_A 73 TKFCALNWKEQSAVVLATVDNDK---KNNRFNDGKVDP-AGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQV 148 (297)
T ss_dssp TEEEEEETTTTEEEEEEECCTTC---SSEEEEEEEECT-TSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEE
T ss_pred CeEEEEECCCCcEEEEEecCCCC---CCCCCCCEEECC-CCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeecc
Confidence 59999999887433332221110 114578999998 88877655321 223444443222222233334
Q ss_pred CceeEEEeC-CCcEE-EEEcCCCeEEEEECC--CCCCc--eeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEE
Q 038533 170 KEVYDICWG-EARVF-ASVSADGSVRIFDLR--DKEHS--TIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILD 243 (337)
Q Consensus 170 ~~v~~~~~~-~~~~l-~~~~~dg~i~iwd~~--~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d 243 (337)
...+.++|+ +++.+ ++.+.++.|..||+. ++... ..+............+++++ ++++.++....+. |..||
T Consensus 149 ~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~-~G~lwva~~~~~~-v~~~d 226 (297)
T 3g4e_A 149 DISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDA-EGKLWVACYNGGR-VIRLD 226 (297)
T ss_dssp SBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBT-TSCEEEEEETTTE-EEEEC
T ss_pred ccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECC-CCCEEEEEcCCCE-EEEEc
Confidence 456889999 67655 556668899999974 44321 12222212234567899998 7876665555555 99999
Q ss_pred CCCCCCCeEEeecccceeeEEEeC-CCCCCeEEEEcC
Q 038533 244 IRSPTLPVAELERHRACVNAIAWA-PQSRRHICSVGD 279 (337)
Q Consensus 244 ~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~~~~~ 279 (337)
..+ ++.+..+..+...+++++|. |+++.++++...
T Consensus 227 ~~t-G~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 227 PVT-GKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp TTT-CCEEEEEECSSSBEEEEEEESGGGCEEEEEEBC
T ss_pred CCC-ceEEEEEECCCCCceEEEEeCCCCCEEEEEcCC
Confidence 986 56677777676789999998 888744455543
No 209
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.45 E-value=2e-10 Score=95.61 Aligned_cols=219 Identities=9% Similarity=0.015 Sum_probs=139.1
Q ss_pred CeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCc
Q 038533 73 PTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTT 150 (337)
Q Consensus 73 i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~ 150 (337)
..+..|+|++. .++.+.. + .|..||..+++. ..+.. . ..+.+++|++ +++++++. .+ .
T Consensus 51 ~egp~~~~~~~--------~l~~~d~~~~~i~~~d~~~~~~---~~~~~-~-----~~v~~i~~~~-dg~l~v~~-~~-g 110 (326)
T 2ghs_A 51 GEGPTFDPASG--------TAWWFNILERELHELHLASGRK---TVHAL-P-----FMGSALAKIS-DSKQLIAS-DD-G 110 (326)
T ss_dssp EEEEEEETTTT--------EEEEEEGGGTEEEEEETTTTEE---EEEEC-S-----SCEEEEEEEE-TTEEEEEE-TT-E
T ss_pred CcCCeEeCCCC--------EEEEEECCCCEEEEEECCCCcE---EEEEC-C-----CcceEEEEeC-CCeEEEEE-CC-C
Confidence 35788999755 3666665 3 999999988732 22221 2 5689999998 88777654 44 4
Q ss_pred EEEEeCCCccchhhhh----ccCCceeEEEeC-CCcEEEEEcC------CCeEEEEECCCCCCceeeecCCCCCCCceEE
Q 038533 151 CTIWDIEKGVVETQLI----AHDKEVYDICWG-EARVFASVSA------DGSVRIFDLRDKEHSTIIYESPQPDTPLLRL 219 (337)
Q Consensus 151 i~v~d~~~~~~~~~~~----~~~~~v~~~~~~-~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~ 219 (337)
|.+||..+++...... .....+++++++ +++++++... .+.|..+| +++. ..+.. .......+
T Consensus 111 l~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~-~~~~~---~~~~~~~i 184 (326)
T 2ghs_A 111 LFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKV-TKLFA---DISIPNSI 184 (326)
T ss_dssp EEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEE-EEEEE---EESSEEEE
T ss_pred EEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcE-EEeeC---CCcccCCe
Confidence 9999988776432111 112358899999 6776554432 24566666 3332 22211 12346789
Q ss_pred EeecCCCcEEEEEEecCCEEEEEECC--CCC-CC-----eEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCC
Q 038533 220 AWNKQDLRYMATILMDSNKVVILDIR--SPT-LP-----VAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLP 291 (337)
Q Consensus 220 ~~~~~~~~~l~~~~~d~~~i~i~d~~--~~~-~~-----~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 291 (337)
+|+| +++.++.+......|.+||+. + + .. +..+......+..+++.++|. +.++...++.|..|+..
T Consensus 185 ~~s~-dg~~lyv~~~~~~~I~~~d~~~~~-Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~-lwva~~~~~~v~~~d~~-- 259 (326)
T 2ghs_A 185 CFSP-DGTTGYFVDTKVNRLMRVPLDART-GLPTGKAEVFIDSTGIKGGMDGSVCDAEGH-IWNARWGEGAVDRYDTD-- 259 (326)
T ss_dssp EECT-TSCEEEEEETTTCEEEEEEBCTTT-CCBSSCCEEEEECTTSSSEEEEEEECTTSC-EEEEEETTTEEEEECTT--
T ss_pred EEcC-CCCEEEEEECCCCEEEEEEccccc-CCcccCceEEEECCCCCCCCCeeEECCCCC-EEEEEeCCCEEEEECCC--
Confidence 9999 888776665443349999986 3 2 11 112222345678899999998 77766667889999875
Q ss_pred CCCCCCCCCceeeeeCCCceeEEEEc-cCCCceEEEEc
Q 038533 292 PVAGPNGIDPMSMYSAGSEINQLQWS-PAQPDWLAIAF 328 (337)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~ 328 (337)
. .....+..+...+.+++|+ |++..|+.++.
T Consensus 260 g------~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 260 G------NHIARYEVPGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp C------CEEEEEECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred C------CEEEEEECCCCCcEEEEEecCCCCEEEEEec
Confidence 2 1122344455679999998 88877765543
No 210
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.42 E-value=5.8e-11 Score=99.65 Aligned_cols=265 Identities=9% Similarity=-0.017 Sum_probs=165.5
Q ss_pred CceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCc---CCCCCCCCeEEEecCCCCcccCcCCccEEEE
Q 038533 22 YPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSL---SFDHPYPPTKLMFDPNSSSRKSSSNRHLLAS 96 (337)
Q Consensus 22 ~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~---~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~ 96 (337)
..+..++++ ++.+++.... .++.++||.++ ...+...+.. ...+-..+..+++.++++ ++++
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~--~~~~~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~---------L~v~ 83 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQF--YQPEMQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGI---------VWML 83 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGG--GCCSCSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSE---------EEEE
T ss_pred CCcceEEECCCCCEEEEeCCC--CCCceEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCc---------EEEE
Confidence 578899999 6666665320 12336777776 2233321111 123556789999999987 7665
Q ss_pred eC------C-eEEEEecCCCCccceeeecCCCC-CcccCCeeEEEeecCCCCeEEEee---CCCcEEEEeCCCccchhhh
Q 038533 97 SG------D-FLRLWDVGDSSIEPVAVLNNSKS-SEFCAPLTSFDWNEIEPKRIGTCS---IDTTCTIWDIEKGVVETQL 165 (337)
Q Consensus 97 ~~------~-~v~vw~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~l~~~~---~dg~i~v~d~~~~~~~~~~ 165 (337)
.. + .|.+||+.+++ ....+..... ......+..+++++..+..+++-. .++.|.+||+.+++..+.+
T Consensus 84 D~g~~~~~~~~i~~~d~~tg~--~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~ 161 (343)
T 2qe8_A 84 DNGNQSKSVPKLVAWDTLNNQ--LSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVL 161 (343)
T ss_dssp ECHHHHTSCCEEEEEETTTTE--EEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEEC
T ss_pred cCCCCcCCCCeEEEEECCCCe--EEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEe
Confidence 42 3 89999999884 3444432210 011135688999972344555554 5789999999888766555
Q ss_pred hccCCcee-EEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEE
Q 038533 166 IAHDKEVY-DICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILD 243 (337)
Q Consensus 166 ~~~~~~v~-~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d 243 (337)
..|..... ...+. ++..+.+.+.++.++.|. .....++|+| +++.|+++...+..+..++
T Consensus 162 ~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~-----------------~~~~gia~s~-dg~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 162 QGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPH-----------------LGVNGIVLDA-ENEWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp TTCTTTSCCSCCCEETTEECBEECTTSCEECCC-----------------CCEEEEEECT-TSCEEEEEESSCSEEEEEE
T ss_pred cCCCcccccccceeECCEEEEeccCCCceecee-----------------cccceeEecc-CCCEEEEEeCCCCeEEEEE
Confidence 44322111 13334 566677777777765442 2357899999 8998988888775577776
Q ss_pred CCCC--CC--------CeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeee--CCCce
Q 038533 244 IRSP--TL--------PVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYS--AGSEI 311 (337)
Q Consensus 244 ~~~~--~~--------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~--~~~~v 311 (337)
.... .. .+ ...++......++++++|. ++++...++.|.+||... +. ...+.. +...+
T Consensus 224 ~~~~~~~~~~~~~~~~~~-~~~g~~g~pdgia~d~~G~-l~va~~~~~~V~~~d~~~-------G~-~~~~~~~~~~~~p 293 (343)
T 2qe8_A 224 SADLSNLQLTDAELGSKI-ERYSEKPICDGISIDKDHN-IYVGDLAHSAIGVITSAD-------RA-YKLLVTDEKLSWT 293 (343)
T ss_dssp HHHHTCTTCCHHHHHTTC-EEEEECCSCSCEEECTTCC-EEEEEGGGTEEEEEETTT-------TE-EEEEEECGGGSCE
T ss_pred HHHhcCCCCChhhhhcce-EecccCCCCceEEECCCCC-EEEEccCCCeEEEEECCC-------CC-EEEEEECCceecC
Confidence 4310 10 01 1123344567899999998 888888899999999841 11 122222 24568
Q ss_pred eEEEEccCCCceEEEEcC
Q 038533 312 NQLQWSPAQPDWLAIAFS 329 (337)
Q Consensus 312 ~~~~~~~~~~~l~~~~~d 329 (337)
.+++|.+++..+++.+..
T Consensus 294 ~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 294 DSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp EEEEECTTSCEEEEECCG
T ss_pred CeeEECCCCcEEEEeCcc
Confidence 999999998766666543
No 211
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.39 E-value=1e-10 Score=107.49 Aligned_cols=237 Identities=12% Similarity=0.075 Sum_probs=146.3
Q ss_pred CCCCCCCeEEEecCCCCcccCcCCccEEEE-----eCC--eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCC
Q 038533 67 FDHPYPPTKLMFDPNSSSRKSSSNRHLLAS-----SGD--FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEP 139 (337)
Q Consensus 67 ~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~-----~~~--~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 139 (337)
.++...+..++||||++ +||- |++ .|++||+.+++.... .+.. .....++|+ ++
T Consensus 125 ~~~~~~l~~~~~SpDg~---------~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~-------~k~~~~~Ws--Dg 185 (693)
T 3iuj_A 125 PDGTTALDQLSFSRDGR---------ILAYSLSLAGSDWREIHLMDVESKQPLET-PLKD-------VKFSGISWL--GN 185 (693)
T ss_dssp TTSCCEEEEEEECTTSS---------EEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEE-------EESCCCEEE--TT
T ss_pred CCCcEEEEEEEECCCCC---------EEEEEEecCCCceEEEEEEECCCCCCCcc-ccCC-------ceeccEEEe--CC
Confidence 34566788999999999 7773 344 899999999853221 2221 113578898 67
Q ss_pred CeEEEeeCCC-------------cEEEEeCCCccc----hhhhhc-cCCceeEEEeC-CCcEEEEEcC----CCeEEEEE
Q 038533 140 KRIGTCSIDT-------------TCTIWDIEKGVV----ETQLIA-HDKEVYDICWG-EARVFASVSA----DGSVRIFD 196 (337)
Q Consensus 140 ~~l~~~~~dg-------------~i~v~d~~~~~~----~~~~~~-~~~~v~~~~~~-~~~~l~~~~~----dg~i~iwd 196 (337)
+.|+.++.+. .|++|++.++.. +..... |.....++.|+ ++++|+.... +..|.++|
T Consensus 186 ~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d 265 (693)
T 3iuj_A 186 EGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKD 265 (693)
T ss_dssp TEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEE
T ss_pred CEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEE
Confidence 7777777664 399999877653 222233 44557889999 7877754332 35899999
Q ss_pred CCCCCC-ceeeecCCCCCCCceEEEeecCCCcEEEEEE-ecC--CEEEEEECCCCCC-CeEEeecccceeeEEEeCCCCC
Q 038533 197 LRDKEH-STIIYESPQPDTPLLRLAWNKQDLRYMATIL-MDS--NKVVILDIRSPTL-PVAELERHRACVNAIAWAPQSR 271 (337)
Q Consensus 197 ~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~d~--~~i~i~d~~~~~~-~~~~~~~~~~~v~~~~~~~~~~ 271 (337)
+.++.. ...+.. +....... |++ ++..|+..+ .++ ..|..+|+.++.. ....+..|...+. .|+++++
T Consensus 266 ~~~~~~~~~~l~~---~~~~~~~~-~~~-~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~ 338 (693)
T 3iuj_A 266 LSQENAPLLTVQG---DLDADVSL-VDN-KGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSG 338 (693)
T ss_dssp TTSTTCCCEEEEC---SSSSCEEE-EEE-ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETT
T ss_pred CCCCCCceEEEeC---CCCceEEE-Eec-cCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECC
Confidence 987642 223222 22334444 566 455544444 332 3499999987432 1345555665554 8899988
Q ss_pred CeEEEEcCCC--cEEEEeCCCCCCCCCCCCCceee-eeCCCceeEEEEccCCCceEEEEcC----CcEEEEeC
Q 038533 272 RHICSVGDDS--QAFIWELPLPPVAGPNGIDPMSM-YSAGSEINQLQWSPAQPDWLAIAFS----NKMQLLKV 337 (337)
Q Consensus 272 ~~l~~~~~dg--~i~iw~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~iw~l 337 (337)
.++++...++ .|++|++. . .....+ ......+..+.++|+++.++....+ +.+..|++
T Consensus 339 ~lv~~~~~~g~~~l~~~d~~--g------~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~ 403 (693)
T 3iuj_A 339 YLFAEYMVDATARVEQFDYE--G------KRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEP 403 (693)
T ss_dssp EEEEEEEETTEEEEEEECTT--S------CEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECT
T ss_pred EEEEEEEECCeeEEEEEECC--C------CeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEEC
Confidence 3444444555 57888876 2 111222 2234567788888888877765544 67777663
No 212
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.39 E-value=6.6e-10 Score=92.48 Aligned_cols=227 Identities=12% Similarity=0.014 Sum_probs=141.4
Q ss_pred ceeEEEEe---cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeCC
Q 038533 23 PLYAMAVC---GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSGD 99 (337)
Q Consensus 23 ~v~~~~~s---~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~~ 99 (337)
-....+|+ +.++++... ++.|..|+.+.. .... ......+.++.|+|++. ++++..+
T Consensus 50 ~~egp~~~~~~~~l~~~d~~----~~~i~~~d~~~~--~~~~-----~~~~~~v~~i~~~~dg~---------l~v~~~~ 109 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNIL----ERELHELHLASG--RKTV-----HALPFMGSALAKISDSK---------QLIASDD 109 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGG----GTEEEEEETTTT--EEEE-----EECSSCEEEEEEEETTE---------EEEEETT
T ss_pred CCcCCeEeCCCCEEEEEECC----CCEEEEEECCCC--cEEE-----EECCCcceEEEEeCCCe---------EEEEECC
Confidence 35678898 345555543 788888766543 3222 12346799999999998 7777655
Q ss_pred eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeC------CCcEEEEeCCCccchhhhhccCCcee
Q 038533 100 FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSI------DTTCTIWDIEKGVVETQLIAHDKEVY 173 (337)
Q Consensus 100 ~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~------dg~i~v~d~~~~~~~~~~~~~~~~v~ 173 (337)
.|.+||..+++...+...... .....+.+++++| +++++++... .+.|..++ +++.. .+..+.....
T Consensus 110 gl~~~d~~~g~~~~~~~~~~~---~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~~~~~ 182 (326)
T 2ghs_A 110 GLFLRDTATGVLTLHAELESD---LPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADISIPN 182 (326)
T ss_dssp EEEEEETTTCCEEEEECSSTT---CTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEESSEE
T ss_pred CEEEEECCCCcEEEEeeCCCC---CCCCCCCCEEECC-CCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCCcccC
Confidence 899999988753322221110 0114688999998 8887665542 24555555 44432 2222334567
Q ss_pred EEEeC-CCcEEE-EEcCCCeEEEEECC--CC-CCc--eeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCC
Q 038533 174 DICWG-EARVFA-SVSADGSVRIFDLR--DK-EHS--TIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRS 246 (337)
Q Consensus 174 ~~~~~-~~~~l~-~~~~dg~i~iwd~~--~~-~~~--~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~ 246 (337)
.++|+ +++.++ +.+.++.|.+||+. ++ ... ..+............+++++ ++++.++...++. |..||..
T Consensus 183 ~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~-~G~lwva~~~~~~-v~~~d~~- 259 (326)
T 2ghs_A 183 SICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDA-EGHIWNARWGEGA-VDRYDTD- 259 (326)
T ss_dssp EEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECT-TSCEEEEEETTTE-EEEECTT-
T ss_pred CeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECC-CCCEEEEEeCCCE-EEEECCC-
Confidence 89999 676554 44567899999986 44 211 12222211234567888988 7776665544555 9999983
Q ss_pred CCCCeEEeecccceeeEEEeC-CCCCCeEEEEcCC
Q 038533 247 PTLPVAELERHRACVNAIAWA-PQSRRHICSVGDD 280 (337)
Q Consensus 247 ~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~~~~~d 280 (337)
++.+..+..+...+.+++|. |++..++++...+
T Consensus 260 -g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 260 -GNHIARYEVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp -CCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred -CCEEEEEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 45566666666679999998 8877344444444
No 213
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.39 E-value=3.6e-10 Score=94.81 Aligned_cols=275 Identities=12% Similarity=0.072 Sum_probs=161.8
Q ss_pred cceEEEeeee-ccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC----------C
Q 038533 31 GQRIAVGSFI-EDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG----------D 99 (337)
Q Consensus 31 ~~~la~g~~~-~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~----------~ 99 (337)
++++.+.... ...++.|.++|... ..... .+..+.. + . +.++|+++ .++++.. +
T Consensus 44 ~~~vyV~~~~~~~~~~~V~ViD~~t--~~v~~--~I~vG~~-P-~-va~spDG~--------~lyVan~~~~r~~~G~~~ 108 (386)
T 3sjl_D 44 ARRVYVNDPAHFAAVTQQFVIDGEA--GRVIG--MIDGGFL-P-N-PVVADDGS--------FIAHASTVFSRIARGERT 108 (386)
T ss_dssp TTEEEEEECGGGCSSEEEEEEETTT--TEEEE--EEEECSS-C-E-EEECTTSS--------CEEEEEEEEEETTEEEEE
T ss_pred CCEEEEEcCcccCCCCEEEEEECCC--CeEEE--EEECCCC-C-c-EEECCCCC--------EEEEEcccccccccCCCC
Confidence 6666666530 01156788865543 33332 1112222 2 4 99999999 3444431 2
Q ss_pred -eEEEEecCCCCccceeeecCC--CCCcccCCeeEEEeecCCCCeEEEeeC--CCcEEEEeCCCccchhhhhccCCceeE
Q 038533 100 -FLRLWDVGDSSIEPVAVLNNS--KSSEFCAPLTSFDWNEIEPKRIGTCSI--DTTCTIWDIEKGVVETQLIAHDKEVYD 174 (337)
Q Consensus 100 -~v~vw~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~l~~~~~--dg~i~v~d~~~~~~~~~~~~~~~~v~~ 174 (337)
.|.+||..+.+ ....+.-. ...........++|+| +++++.++.. ++.|.++|+.+++.+.++... +. .
T Consensus 109 ~~VsviD~~t~~--v~~~I~v~~g~r~~~g~~P~~~a~sp-DGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~-g~--~ 182 (386)
T 3sjl_D 109 DYVEVFDPVTLL--PTADIELPDAPRFLVGTYPWMTSLTP-DGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP-DC--Y 182 (386)
T ss_dssp EEEEEECTTTCC--EEEEEEETTCCCCCBSCCGGGEEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEEEECC-SE--E
T ss_pred CEEEEEECCCCe--EEEEEECCCccccccCCCCceEEEcC-CCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC-Cc--c
Confidence 89999999984 44444321 0000002355799999 9998888764 689999999999988777522 21 2
Q ss_pred EEeC-CCcEEEEEcCCCeEEEEECCC-CCCceeeecCC-CCCCCc-eEEEeecCCCcEEEEEEecCCEEEEEECCCCCC-
Q 038533 175 ICWG-EARVFASVSADGSVRIFDLRD-KEHSTIIYESP-QPDTPL-LRLAWNKQDLRYMATILMDSNKVVILDIRSPTL- 249 (337)
Q Consensus 175 ~~~~-~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~-~~~~~i-~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~- 249 (337)
..+. ..+.+++.+.||.+.+.++.. ++......... ....++ ....|.+.++++++ .+.++. |++.|+.....
T Consensus 183 ~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~-V~v~d~~~~~~~ 260 (386)
T 3sjl_D 183 HIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGK-IHQIDLSSGDAK 260 (386)
T ss_dssp EEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSE-EEEEECTTSSCE
T ss_pred eeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCE-EEEEECCCCcce
Confidence 2233 356777888899999999986 44321110010 011222 22466543676555 455666 99999976321
Q ss_pred CeEEee----------cccceeeEEEeCCCCCCeEEEEcC----------CCcEEEEeCCCCCCCCCCCCCceeeeeCCC
Q 038533 250 PVAELE----------RHRACVNAIAWAPQSRRHICSVGD----------DSQAFIWELPLPPVAGPNGIDPMSMYSAGS 309 (337)
Q Consensus 250 ~~~~~~----------~~~~~v~~~~~~~~~~~~l~~~~~----------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 309 (337)
.+..+. ........++++|+++ .++.... .+.|.+.|+. +.. ......-..
T Consensus 261 v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~-~lyV~~~~~~~~~hk~~~~~V~viD~~--t~k------v~~~i~vg~ 331 (386)
T 3sjl_D 261 FLPAVEALTEAERADGWRPGGWQQVAYHRALD-RIYLLVDQRDEWRHKTASRFVVVLDAK--TGE------RLAKFEMGH 331 (386)
T ss_dssp ECCCEESSCHHHHHTTEEECSSSCEEEETTTT-EEEEEEEECCTTCTTSCEEEEEEEETT--TCC------EEEEEEEEE
T ss_pred eecceeccccccccccccCCCcceeeECCCCC-eEEEEeccccccccCCCCCEEEEEECC--CCe------EEEEEECCC
Confidence 111121 0122344578899888 5555432 2468888988 311 232222334
Q ss_pred ceeEEEEccCCC-ceEEEE-cCCcEEEEeC
Q 038533 310 EINQLQWSPAQP-DWLAIA-FSNKMQLLKV 337 (337)
Q Consensus 310 ~v~~~~~~~~~~-~l~~~~-~d~~i~iw~l 337 (337)
++.+++++||++ .|+++. .++.|.++|.
T Consensus 332 ~~~~lavs~D~~~~ly~tn~~~~~VsViD~ 361 (386)
T 3sjl_D 332 EIDSINVSQDEKPLLYALSTGDKTLYIHDA 361 (386)
T ss_dssp EECEEEECSSSSCEEEEEETTTTEEEEEET
T ss_pred CcceEEECCCCCeEEEEEcCCCCeEEEEEC
Confidence 789999999996 566665 4889999874
No 214
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.37 E-value=3.1e-10 Score=93.60 Aligned_cols=226 Identities=10% Similarity=-0.002 Sum_probs=144.5
Q ss_pred CCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeC
Q 038533 70 PYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSI 147 (337)
Q Consensus 70 ~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~ 147 (337)
........|+|++. .++.+.. + .|..|+. +++ ...+..+. ..+..+++++ +++++++...
T Consensus 44 ~~~~egp~~~~~g~--------~l~~~d~~~~~i~~~~~-~g~---~~~~~~~~-----~~~~gl~~d~-dG~l~v~~~~ 105 (305)
T 3dr2_A 44 ATWSEGPAWWEAQR--------TLVWSDLVGRRVLGWRE-DGT---VDVLLDAT-----AFTNGNAVDA-QQRLVHCEHG 105 (305)
T ss_dssp CSSEEEEEEEGGGT--------EEEEEETTTTEEEEEET-TSC---EEEEEESC-----SCEEEEEECT-TSCEEEEETT
T ss_pred CcCccCCeEeCCCC--------EEEEEECCCCEEEEEeC-CCC---EEEEeCCC-----CccceeeECC-CCCEEEEECC
Confidence 34457889999987 4666665 3 9999987 442 22333333 6688999998 8887776666
Q ss_pred CCcEEEEeCCCccchhhhh---c-cCCceeEEEeC-CCcEEEE----EcC-------------CCeEEEEECCCCCCcee
Q 038533 148 DTTCTIWDIEKGVVETQLI---A-HDKEVYDICWG-EARVFAS----VSA-------------DGSVRIFDLRDKEHSTI 205 (337)
Q Consensus 148 dg~i~v~d~~~~~~~~~~~---~-~~~~v~~~~~~-~~~~l~~----~~~-------------dg~i~iwd~~~~~~~~~ 205 (337)
++.|.+|+.. ++...... + ....+++++++ +++++++ |.. .+.|..+|..+++....
T Consensus 106 ~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~ 184 (305)
T 3dr2_A 106 RRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRM 184 (305)
T ss_dssp TTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEE
T ss_pred CCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEE
Confidence 6889999975 54221111 1 12346789999 6777775 332 35688888766664433
Q ss_pred eecCCCCCCCceEEEeecCCCcEEEEEEecC-----CEEEEEECCCCCCCeEE---e-ecccceeeEEEeCCCCCCeEEE
Q 038533 206 IYESPQPDTPLLRLAWNKQDLRYMATILMDS-----NKVVILDIRSPTLPVAE---L-ERHRACVNAIAWAPQSRRHICS 276 (337)
Q Consensus 206 ~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~-----~~i~i~d~~~~~~~~~~---~-~~~~~~v~~~~~~~~~~~~l~~ 276 (337)
. .. .....++|+| +++.|+++.... ..|.+||+.... +.. + ......+..+++.++|. +.++
T Consensus 185 ~-~~----~~p~gl~~sp-dg~~lyv~~~~~~~~~~~~i~~~~~~~~~--l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~ 255 (305)
T 3dr2_A 185 A-DL----DHPNGLAFSP-DEQTLYVSQTPEQGHGSVEITAFAWRDGA--LHDRRHFASVPDGLPDGFCVDRGGW-LWSS 255 (305)
T ss_dssp E-EE----SSEEEEEECT-TSSEEEEEECCC---CCCEEEEEEEETTE--EEEEEEEECCSSSCCCSEEECTTSC-EEEC
T ss_pred e-cC----CCCcceEEcC-CCCEEEEEecCCcCCCCCEEEEEEecCCC--ccCCeEEEECCCCCCCeEEECCCCC-EEEe
Confidence 2 22 3567899999 888887776651 349999987532 211 1 11233456789999998 4444
Q ss_pred EcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEcCCcEEE
Q 038533 277 VGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQL 334 (337)
Q Consensus 277 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 334 (337)
+.+ .|.+|+.. . .....+. ....+.+++|+|+++.|+.++.++..++
T Consensus 256 -~~~-gv~~~~~~--g------~~~~~~~-~~~~~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 256 -SGT-GVCVFDSD--G------QLLGHIP-TPGTASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp -CSS-EEEEECTT--S------CEEEEEE-CSSCCCEEEECTTSCEEEEEETTEEEEE
T ss_pred -cCC-cEEEECCC--C------CEEEEEE-CCCceeEEEEeCCCCEEEEEcCCeEEEE
Confidence 444 48889876 2 1122222 2336899999999888888777654443
No 215
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.36 E-value=3e-09 Score=89.20 Aligned_cols=273 Identities=14% Similarity=0.082 Sum_probs=161.1
Q ss_pred ceeeeeCCCceeEEEEe--cceEEEeeee------ccCcceEEEEEecCCCcceecCCCcCC----CCCCCCeEEEecCC
Q 038533 14 NSVTHESPYPLYAMAVC--GQRIAVGSFI------EDYTNRVDVVSFEPESLSIKTHPSLSF----DHPYPPTKLMFDPN 81 (337)
Q Consensus 14 ~~~~~~~~~~v~~~~~s--~~~la~g~~~------~~~d~~i~i~~~~~~~~~~~~~~~~~~----~~~~~i~~i~~~~~ 81 (337)
.+.++....... ++++ +++|+++... +..++.|.+||.......-.. .+.. ........+.|+||
T Consensus 71 v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I--~v~~g~r~~~g~~P~~~a~spD 147 (386)
T 3sjl_D 71 VIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADI--ELPDAPRFLVGTYPWMTSLTPD 147 (386)
T ss_dssp EEEEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEE--EETTCCCCCBSCCGGGEEECTT
T ss_pred EEEEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEE--ECCCccccccCCCCceEEEcCC
Confidence 344444433234 8999 7877776520 012678999776654322221 1100 11235678999999
Q ss_pred CCcccCcCCccEEEEeC--C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCC
Q 038533 82 SSSRKSSSNRHLLASSG--D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEK 158 (337)
Q Consensus 82 ~~~~~~~~~~~~l~~~~--~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 158 (337)
++ .++++.. + .|.++|+.++ +.+.++... .. ...+ |.....+++.+.||.+.+.++.+
T Consensus 148 Gk--------~lyVan~~~~~~VsVID~~t~--~vv~tI~v~-------g~-~~~~-P~g~~~~~~~~~DG~~~~v~~~~ 208 (386)
T 3sjl_D 148 GK--------TLLFYQFSPAPAVGVVDLEGK--AFKRMLDVP-------DC-YHIF-PTAPDTFFMHCRDGSLAKVAFGT 208 (386)
T ss_dssp SS--------EEEEEECSSSCEEEEEETTTT--EEEEEEECC-------SE-EEEE-EEETTEEEEEETTSCEEEEECCS
T ss_pred CC--------EEEEEEcCCCCeEEEEECCCC--cEEEEEECC-------Cc-ceee-cCCCceeEEECCCCCEEEEECCC
Confidence 99 3444442 3 8999999998 566666532 11 2223 32556777888899999999876
Q ss_pred -ccchhh----hhccCCce-eEEEeC-CCcEEEEEcCCCeEEEEECCCCCC--ceeee--c-----CCCCCCCceEEEee
Q 038533 159 -GVVETQ----LIAHDKEV-YDICWG-EARVFASVSADGSVRIFDLRDKEH--STIIY--E-----SPQPDTPLLRLAWN 222 (337)
Q Consensus 159 -~~~~~~----~~~~~~~v-~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~--~-----~~~~~~~i~~~~~~ 222 (337)
++.... +.....++ ....|. ++..++..+.+|.+.+.|+.+... ...+. . ..-.......++++
T Consensus 209 ~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~ 288 (386)
T 3sjl_D 209 EGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYH 288 (386)
T ss_dssp SSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEE
T ss_pred CCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeEC
Confidence 443211 11111222 124554 334455577789999999976642 11111 0 00011344567778
Q ss_pred cCCCcEEEEEEec---------CCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEE-EcCCCcEEEEeCCCCC
Q 038533 223 KQDLRYMATILMD---------SNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICS-VGDDSQAFIWELPLPP 292 (337)
Q Consensus 223 ~~~~~~l~~~~~d---------~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~-~~~dg~i~iw~~~~~~ 292 (337)
| +++.+++...+ +..|.++|+.+ .+.+..+.. ...+..++++|+++.+|++ ...++.|.++|....+
T Consensus 289 ~-~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t-~kv~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k 365 (386)
T 3sjl_D 289 R-ALDRIYLLVDQRDEWRHKTASRFVVVLDAKT-GERLAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE 365 (386)
T ss_dssp T-TTTEEEEEEEECCTTCTTSCEEEEEEEETTT-CCEEEEEEE-EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred C-CCCeEEEEeccccccccCCCCCEEEEEECCC-CeEEEEEEC-CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCc
Confidence 8 77777776532 23599999998 566776653 2478899999999645555 4568999999998222
Q ss_pred CCCCCCCCceeeeeCCCceeEEEEccC
Q 038533 293 VAGPNGIDPMSMYSAGSEINQLQWSPA 319 (337)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~v~~~~~~~~ 319 (337)
..........-++|.+++|
T Consensus 366 --------~~~~i~~~~~p~~l~~s~d 384 (386)
T 3sjl_D 366 --------ELRSVNQLGHGPQVITTAD 384 (386)
T ss_dssp --------EEEEECCCCSSCCEEEECC
T ss_pred --------EEEEecCCCCCceeEECCc
Confidence 3333333444566677666
No 216
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.33 E-value=1.6e-09 Score=92.89 Aligned_cols=232 Identities=9% Similarity=-0.003 Sum_probs=144.8
Q ss_pred ceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C
Q 038533 23 PLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D 99 (337)
Q Consensus 23 ~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~ 99 (337)
....++|+ ++++++... ++.|++|+.+........ .. ..... ++|+|++. .|+.+. +
T Consensus 132 ~P~~la~d~~g~lyv~d~~----~~~I~~id~~~g~~~~~~-----~~-~~~~~-ia~~~~g~---------~l~~~d~~ 191 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRD----DPRVRLISVDDNKVTTVH-----PG-FKGGK-PAVTKDKQ---------RVYSIGWE 191 (409)
T ss_dssp CEEEEEECSTTEEEEEETT----TTEEEEEETTTTEEEEEE-----ET-CCBCB-CEECTTSS---------EEEEEBSS
T ss_pred CceEEEEeCCCCEEEEecC----CCcEEEEECCCCEEEEee-----cc-CCCCc-eeEecCCC---------cEEEEecC
Confidence 57788998 555555443 688999776543322211 11 22234 99999998 655554 2
Q ss_pred ---eEEEEecCCCCccceeee---cC-CCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhh----hhcc
Q 038533 100 ---FLRLWDVGDSSIEPVAVL---NN-SKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQ----LIAH 168 (337)
Q Consensus 100 ---~v~vw~~~~~~~~~~~~~---~~-~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~----~~~~ 168 (337)
.|.+++...+. ....+ .. .. ..+.+++++| +...|..+..++.|+.||..++..... ..++
T Consensus 192 ~~~~I~~~d~~~~~--~~~~~g~~~~~~~-----~~p~~iav~p-~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~ 263 (409)
T 3hrp_A 192 GTHTVYVYMKASGW--APTRIGQLGSTFS-----GKIGAVALDE-TEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGS 263 (409)
T ss_dssp TTCEEEEEEGGGTT--CEEEEEECCTTSC-----SCCCBCEECT-TSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSC
T ss_pred CCceEEEEEcCCCc--eeEEeeeccchhc-----CCcEEEEEeC-CCCeEEEEECCCcEEEEECCCCCEEEEecccccCC
Confidence 68888877653 22223 11 22 5678899998 555555577788999999987653221 1122
Q ss_pred CCce-e-EEEeCC--CcEEEEEcCCCeEEEEECCCCCCceeeecCC---C---------CCCCceEEEeecCCCcEEEEE
Q 038533 169 DKEV-Y-DICWGE--ARVFASVSADGSVRIFDLRDKEHSTIIYESP---Q---------PDTPLLRLAWNKQDLRYMATI 232 (337)
Q Consensus 169 ~~~v-~-~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~---~---------~~~~i~~~~~~~~~~~~l~~~ 232 (337)
...- . .++|++ +.++++-..++.|+.||.... ...+.... . .-.....++++| +++++++-
T Consensus 264 ~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~-dG~lyvad 340 (409)
T 3hrp_A 264 LGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDE-DGNFYIVD 340 (409)
T ss_dssp CCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECT-TCCEEEEE
T ss_pred CCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeC-CCCEEEEe
Confidence 2222 2 899994 556666677889999997654 22222110 0 013467899999 88855554
Q ss_pred E-ecCCEEEEEECCCCCCCeEEeecc---------------cceeeEEEeCCCCCCeEEEEcCCCcEEEEeCC
Q 038533 233 L-MDSNKVVILDIRSPTLPVAELERH---------------RACVNAIAWAPQSRRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 233 ~-~d~~~i~i~d~~~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 289 (337)
. .++. |+.||+.. +. +..+.++ -.....++++|++. ++++-..+++|+.++++
T Consensus 341 ~~~~~~-I~~~~~~~-G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~-lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 341 GFKGYC-LRKLDILD-GY-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGG-YWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp TTTTCE-EEEEETTT-TE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSE-EEEEESTTCEEEEEEEC
T ss_pred CCCCCE-EEEEECCC-CE-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCC-EEEEECCCCeEEEEEeC
Confidence 4 4444 99999765 32 4445443 23578999999987 88888888888887653
No 217
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.30 E-value=1.9e-09 Score=88.88 Aligned_cols=224 Identities=8% Similarity=-0.019 Sum_probs=141.9
Q ss_pred CCceeEEEEe--cc-eEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEe
Q 038533 21 PYPLYAMAVC--GQ-RIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASS 97 (337)
Q Consensus 21 ~~~v~~~~~s--~~-~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~ 97 (337)
........|+ ++ +++++.. ++.|..|+.+.. ... + ..+...+..++++++++ ++++.
T Consensus 44 ~~~~egp~~~~~g~~l~~~d~~----~~~i~~~~~~g~---~~~---~-~~~~~~~~gl~~d~dG~---------l~v~~ 103 (305)
T 3dr2_A 44 ATWSEGPAWWEAQRTLVWSDLV----GRRVLGWREDGT---VDV---L-LDATAFTNGNAVDAQQR---------LVHCE 103 (305)
T ss_dssp CSSEEEEEEEGGGTEEEEEETT----TTEEEEEETTSC---EEE---E-EESCSCEEEEEECTTSC---------EEEEE
T ss_pred CcCccCCeEeCCCCEEEEEECC----CCEEEEEeCCCC---EEE---E-eCCCCccceeeECCCCC---------EEEEE
Confidence 3456778898 66 4555553 788888765322 221 1 23456689999999998 88776
Q ss_pred C-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEE----eeC-------------CCcEEEEeCCC
Q 038533 98 G-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGT----CSI-------------DTTCTIWDIEK 158 (337)
Q Consensus 98 ~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~----~~~-------------dg~i~v~d~~~ 158 (337)
. + .|.+|+.. ++...+..... ......+.++++.+ +++++++ |.. .+.|..+|..+
T Consensus 104 ~~~~~v~~~~~~-g~~~~~~~~~~---~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~ 178 (305)
T 3dr2_A 104 HGRRAITRSDAD-GQAHLLVGRYA---GKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDG 178 (305)
T ss_dssp TTTTEEEEECTT-SCEEEEECEET---TEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSS
T ss_pred CCCCEEEEECCC-CCEEEEEeccC---CCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCC
Confidence 5 3 89999986 43222211111 00113467899998 8988886 432 25688888766
Q ss_pred ccchhhhhccCCceeEEEeC-CCcEEEEEcCC------CeEEEEECCCCCCc--eeeecCCCCCCCceEEEeecCCCcEE
Q 038533 159 GVVETQLIAHDKEVYDICWG-EARVFASVSAD------GSVRIFDLRDKEHS--TIIYESPQPDTPLLRLAWNKQDLRYM 229 (337)
Q Consensus 159 ~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d------g~i~iwd~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~l 229 (337)
++..... .....+.++|+ +++.|+.+... +.|..||+...... ..+... .......+++++ ++++.
T Consensus 179 g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~--~~~~pdgi~~d~-~G~lw 253 (305)
T 3dr2_A 179 SPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASV--PDGLPDGFCVDR-GGWLW 253 (305)
T ss_dssp CCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECC--SSSCCCSEEECT-TSCEE
T ss_pred CcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEEC--CCCCCCeEEECC-CCCEE
Confidence 6643322 33456889999 67777777655 78999998754311 111111 223456788888 78744
Q ss_pred EEEEecCCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCC
Q 038533 230 ATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDS 281 (337)
Q Consensus 230 ~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 281 (337)
++ + .+. |.+||.. ++.+..+..+. .+..++|.|+++ .|+.++.++
T Consensus 254 v~-~-~~g-v~~~~~~--g~~~~~~~~~~-~~~~~~f~~d~~-~L~it~~~~ 298 (305)
T 3dr2_A 254 SS-S-GTG-VCVFDSD--GQLLGHIPTPG-TASNCTFDQAQQ-RLFITGGPC 298 (305)
T ss_dssp EC-C-SSE-EEEECTT--SCEEEEEECSS-CCCEEEECTTSC-EEEEEETTE
T ss_pred Ee-c-CCc-EEEECCC--CCEEEEEECCC-ceeEEEEeCCCC-EEEEEcCCe
Confidence 44 4 344 9999984 45566665544 588999999888 666666554
No 218
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.29 E-value=9.7e-10 Score=93.78 Aligned_cols=260 Identities=14% Similarity=0.101 Sum_probs=156.6
Q ss_pred ceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEe----------CC-eEEEEecCCCCccc
Q 038533 45 NRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASS----------GD-FLRLWDVGDSSIEP 113 (337)
Q Consensus 45 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~----------~~-~v~vw~~~~~~~~~ 113 (337)
+.|.++|.......... ..+. .+ .+.++||++ .++++. .+ .|.++|..+.+ .
T Consensus 99 ~~VsVID~~t~~vv~~I----~vG~-~P--gia~SpDgk--------~lyVan~~~~~~~~G~~~~~VsviD~~t~~--v 161 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMT----DGGF-LP--HPVAAEDGS--------FFAQASTVFERIARGKRTDYVEVFDPVTFL--P 161 (426)
T ss_dssp EEEEEEETTTTEEEEEE----EECS-SC--EEEECTTSS--------CEEEEEEEEEETTEEEEEEEEEEECTTTCC--E
T ss_pred CeEEEEECCCCEEEEEE----ECCC-CC--ceEECCCCC--------EEEEEeccccccccCCCCCEEEEEECCCCc--E
Confidence 78888666544332222 1222 23 899999998 444443 13 89999999984 4
Q ss_pred eeeecCC--CCCcccCCeeEEEeecCCCCeEEEeeC--CCcEEEEeCCCccchhhhhccCCceeEEEeCCCcEEEEEcCC
Q 038533 114 VAVLNNS--KSSEFCAPLTSFDWNEIEPKRIGTCSI--DTTCTIWDIEKGVVETQLIAHDKEVYDICWGEARVFASVSAD 189 (337)
Q Consensus 114 ~~~~~~~--~~~~~~~~i~~~~~~~~~~~~l~~~~~--dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d 189 (337)
+..+.-. ...........+.|+| ++++++++.. ++.|.+.|+.+++.+..+... +. ..+.-.....+++.+.|
T Consensus 162 v~~I~v~g~~r~~~g~~P~~~~~sp-DGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~-g~-~~~~p~g~~~~v~~~~d 238 (426)
T 3c75_H 162 IADIELPDAPRFLVGTYQWMNALTP-DNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVP-DC-YHIFPASPTVFYMNCRD 238 (426)
T ss_dssp EEEEEETTCCCCCBSCCGGGSEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEEEECC-SE-EEEEEEETTEEEEEETT
T ss_pred EEEEECCCccccccCCCcceEEEcC-CCCEEEEEecCCCCeEEEEECCCCeEEEEEEcC-Cc-eeeccCCCcEEEEEcCC
Confidence 4444311 0000002345789999 9999888874 578999999999887776532 11 11111124667777889
Q ss_pred CeEEEEECCCCCCceee---ecCCCCCCC-ceEEEeecCCCcEEEEEEecCCEEEEEECCCCCC-CeEEee-------c-
Q 038533 190 GSVRIFDLRDKEHSTII---YESPQPDTP-LLRLAWNKQDLRYMATILMDSNKVVILDIRSPTL-PVAELE-------R- 256 (337)
Q Consensus 190 g~i~iwd~~~~~~~~~~---~~~~~~~~~-i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~-~~~~~~-------~- 256 (337)
|.+.+.++..++..... +.. ...+ ...+.+.+ ++..++..+..+. +.+.|...... .+..+. .
T Consensus 239 G~~~~V~~~~~~v~~~~~~~~~v--~~~p~~~~~~~~~-dg~~~~~~s~~g~-V~ViD~~~~~~~v~~~~~~~~~~~i~~ 314 (426)
T 3c75_H 239 GSLARVDFADGETKVTNTEVFHT--EDELLINHPAFSL-RSGRLVWPTYTGK-IFQADLTAEGATFRAPIEALTEAERAD 314 (426)
T ss_dssp SSEEEEECCTTCCEEEECCCCSC--TTSCBCSCCEECT-TTCEEEEEBTTSE-EEEEEECSSCEEECCCEESSCTTTGGG
T ss_pred CCEEEEECCCCcEEEEeeeeecc--CCCceeeEeeecC-CCCEEEEEeCCCc-EEEEeccCCceEEeeeeeecccccccc
Confidence 99988898555533211 111 1112 12356787 6676666666665 99999865221 001110 0
Q ss_pred --ccceeeEEEeCCCCCCeEEEEc----------CCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCC-ce
Q 038533 257 --HRACVNAIAWAPQSRRHICSVG----------DDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQP-DW 323 (337)
Q Consensus 257 --~~~~v~~~~~~~~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l 323 (337)
.......++++|+++ .+++.. .++.|.+.|+. +.. ......-......++|+||++ .+
T Consensus 315 g~~p~g~~~va~s~dg~-rlyVa~~~~~~gthk~~s~~VsVID~~--T~k------vv~~I~vg~~P~gia~spDg~~~l 385 (426)
T 3c75_H 315 DWRPGGWQQTAYHRQSD-RIYLLVDQRDEWKHKAASRFVVVLNAE--TGE------RINKIELGHEIDSINVSQDAEPLL 385 (426)
T ss_dssp TEEECSSSCEEEEGGGT-EEEEEEEECCTTCTTSCEEEEEEEETT--TCC------EEEEEEEEEEECEEEECCSSSCEE
T ss_pred ccccCCceeeEEcCCCC-EEEEEecccccccccCCCCEEEEEECC--CCe------EEEEEECCCCcCeEEEccCCCEEE
Confidence 011223478999988 555443 13579999998 422 222222233589999999998 77
Q ss_pred EEEE-cCCcEEEEeC
Q 038533 324 LAIA-FSNKMQLLKV 337 (337)
Q Consensus 324 ~~~~-~d~~i~iw~l 337 (337)
+++. .++.|.++|+
T Consensus 386 yv~n~~s~~VsVID~ 400 (426)
T 3c75_H 386 YALSAGTQTLHIYDA 400 (426)
T ss_dssp EEEETTTTEEEEEET
T ss_pred EEEcCCCCeEEEEEC
Confidence 7777 5899999884
No 219
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.29 E-value=2.3e-10 Score=105.16 Aligned_cols=200 Identities=11% Similarity=0.115 Sum_probs=131.2
Q ss_pred CCeeEEEeecCCCCeEEE-----eeCCCcEEEEeCCCccchhhhhccCCceeEEEeCCCcEEEEEcCCC-----------
Q 038533 127 APLTSFDWNEIEPKRIGT-----CSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGEARVFASVSADG----------- 190 (337)
Q Consensus 127 ~~i~~~~~~~~~~~~l~~-----~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg----------- 190 (337)
..+..++||| ++++++- |+....|++||+.+++.+.. .........++|++++.|+.++.+.
T Consensus 129 ~~l~~~~~Sp-Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~k~~~~~WsDg~~l~y~~~~~~~~~~~~~~~~ 206 (693)
T 3iuj_A 129 TALDQLSFSR-DGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDVKFSGISWLGNEGFFYSSYDKPDGSELSARTD 206 (693)
T ss_dssp CEEEEEEECT-TSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEEESCCCEEETTTEEEEEESSCCC-------CC
T ss_pred EEEEEEEECC-CCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCceeccEEEeCCCEEEEEEecCcccccccccCC
Confidence 5688899999 9998884 33345799999999885432 1111113567888777888877764
Q ss_pred --eEEEEECCCCCCc-eeeecCCC-CCCCceEEEeecCCCcEEEEEEecC---CEEEEEECCCCCCCeEEeecccceeeE
Q 038533 191 --SVRIFDLRDKEHS-TIIYESPQ-PDTPLLRLAWNKQDLRYMATILMDS---NKVVILDIRSPTLPVAELERHRACVNA 263 (337)
Q Consensus 191 --~i~iwd~~~~~~~-~~~~~~~~-~~~~i~~~~~~~~~~~~l~~~~~d~---~~i~i~d~~~~~~~~~~~~~~~~~v~~ 263 (337)
.|++|++.+.... ..++.... +......+.|+| ++++|+.....+ ..|+++|+.++......+..+......
T Consensus 207 ~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~ 285 (693)
T 3iuj_A 207 QHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTE-DDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVS 285 (693)
T ss_dssp CCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECT-TSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEE
T ss_pred CcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcC-CCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEE
Confidence 3999999877542 33444433 344578899999 888876655432 259999998754445666666555555
Q ss_pred EEeCCCCCCeEEEEcCC---CcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEc-CC--cEEEEeC
Q 038533 264 IAWAPQSRRHICSVGDD---SQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAF-SN--KMQLLKV 337 (337)
Q Consensus 264 ~~~~~~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~iw~l 337 (337)
. |++++..+++....+ +.|..+++..+.. .....+..|...+. .|++++..|+.... ++ .|++|++
T Consensus 286 ~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~-----~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~ 357 (693)
T 3iuj_A 286 L-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGP-----AHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDY 357 (693)
T ss_dssp E-EEEETTEEEEEECTTCTTCEEEEEETTSCCG-----GGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECT
T ss_pred E-EeccCCEEEEEECCCCCCCEEEEEeCCCCCc-----cccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEEC
Confidence 4 666666456666554 5788888883221 01234555666665 89999988887664 44 5667653
No 220
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.29 E-value=2.1e-08 Score=84.83 Aligned_cols=239 Identities=11% Similarity=0.007 Sum_probs=143.9
Q ss_pred EEEEe--cceEEEeeee------ccCcceEEEEEecCCCcceecCCC--cCCCCCCCCeEEEecCCCCcccCcCCccEEE
Q 038533 26 AMAVC--GQRIAVGSFI------EDYTNRVDVVSFEPESLSIKTHPS--LSFDHPYPPTKLMFDPNSSSRKSSSNRHLLA 95 (337)
Q Consensus 26 ~~~~s--~~~la~g~~~------~~~d~~i~i~~~~~~~~~~~~~~~--~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~ 95 (337)
.++++ +++|+++... +..++.|.+||............. ....+......+.|+|+++ +|+
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~---------~l~ 140 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNA---------DLL 140 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCC---------EEE
Confidence 88898 7888877520 112678999877643322111000 0001123356899999999 555
Q ss_pred EeC---C-eEEEEecCCCCccceee-ecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhh----
Q 038533 96 SSG---D-FLRLWDVGDSSIEPVAV-LNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLI---- 166 (337)
Q Consensus 96 ~~~---~-~v~vw~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~---- 166 (337)
.+. + .|.++| .++ +.+.. +... . ++.+.|.....+++...||.+.++|. +++......
T Consensus 141 v~n~~~~~~v~viD-~t~--~~~~~~i~~~------~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~ 207 (373)
T 2mad_H 141 FFQFAAGPAVGLVV-QGG--SSDDQLLSSP------T---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAM 207 (373)
T ss_pred EEecCCCCeEEEEE-CCC--CEEeEEcCCC------c---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEecccc
Confidence 442 3 899999 888 44555 4432 1 24444534456777778999999999 776552211
Q ss_pred -ccCCce-eEEEeC-CCcEEEEEcCCCeEEEEECCCCCCce--eeecCC-------CCCCCceEEEeecCCCcEEEEEEe
Q 038533 167 -AHDKEV-YDICWG-EARVFASVSADGSVRIFDLRDKEHST--IIYESP-------QPDTPLLRLAWNKQDLRYMATILM 234 (337)
Q Consensus 167 -~~~~~v-~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~~-------~~~~~i~~~~~~~~~~~~l~~~~~ 234 (337)
....++ ....+. ++..++..+..+.+.+.|+....... .+.... ........+.++| +++.++++..
T Consensus 208 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~-d~~~lyV~~~ 286 (373)
T 2mad_H 208 LTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLK-SSDGIYLLTS 286 (373)
T ss_pred ccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECC-CCCEEEEEec
Confidence 111221 223344 34444444578899999997653211 110000 0112344578888 7777777653
Q ss_pred c---------CCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEc-CCCcEEEEeCC
Q 038533 235 D---------SNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVG-DDSQAFIWELP 289 (337)
Q Consensus 235 d---------~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~iw~~~ 289 (337)
+ +..|.++|+.+ .+.+.++.. ......++|+|+|+.+++++. .++.|.++|+.
T Consensus 287 ~~~~~~~~~~~~~V~VID~~t-~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~ 349 (373)
T 2mad_H 287 EQSAWKLHAAAKEVTSVTGLV-GQTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAG 349 (373)
T ss_pred cCCcccccCCCCeEEEEECCC-CEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECC
Confidence 2 12399999988 556677753 345799999999985566666 58999999998
No 221
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.21 E-value=1.1e-08 Score=86.58 Aligned_cols=226 Identities=10% Similarity=0.024 Sum_probs=136.0
Q ss_pred cEEEEeCC--eEEEEecCCC--CccceeeecCCC---CCcccCCeeEEEeecCCCCeEEEeeCC------CcEEEEeCCC
Q 038533 92 HLLASSGD--FLRLWDVGDS--SIEPVAVLNNSK---SSEFCAPLTSFDWNEIEPKRIGTCSID------TTCTIWDIEK 158 (337)
Q Consensus 92 ~~l~~~~~--~v~vw~~~~~--~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~l~~~~~d------g~i~v~d~~~ 158 (337)
.+++.+.. .|.++|+.+. +++..+++...+ ..+. ..-..+...| ++ +++++..+ |.|.++|.++
T Consensus 97 ~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~-s~Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vlD~~T 173 (462)
T 2ece_A 97 FLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGY-SRLHTVHCGP-DA-IYISALGNEEGEGPGGILMLDHYS 173 (462)
T ss_dssp EEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCE-EEEEEEEECS-SC-EEEEEEEETTSCSCCEEEEECTTT
T ss_pred EEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCC-CcccceeECC-Ce-EEEEcCCCcCCCCCCeEEEEECCC
Confidence 45555553 9999999744 334444442000 0000 2344567777 77 77776655 7899999999
Q ss_pred ccchhhhhccCC---ceeEEEeC-CCcEEEEEc-------------------CCCeEEEEECCCCCCceeeecCCCCCCC
Q 038533 159 GVVETQLIAHDK---EVYDICWG-EARVFASVS-------------------ADGSVRIFDLRDKEHSTIIYESPQPDTP 215 (337)
Q Consensus 159 ~~~~~~~~~~~~---~v~~~~~~-~~~~l~~~~-------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 215 (337)
.+.+.++..... .-+.+-|+ +++.+++.. .+.+|.+||+.+++....+.... ....
T Consensus 174 ~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~-~g~~ 252 (462)
T 2ece_A 174 FEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGE-ENRM 252 (462)
T ss_dssp CCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCT-TEEE
T ss_pred CeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCC-CCCc
Confidence 988877762222 23457778 577777764 37899999999875444443321 1123
Q ss_pred ceEEEe--ecCCCcEEEEEEe-----cCCEEEEEECCCCCC--CeEEe--ec----------------ccceeeEEEeCC
Q 038533 216 LLRLAW--NKQDLRYMATILM-----DSNKVVILDIRSPTL--PVAEL--ER----------------HRACVNAIAWAP 268 (337)
Q Consensus 216 i~~~~~--~~~~~~~l~~~~~-----d~~~i~i~d~~~~~~--~~~~~--~~----------------~~~~v~~~~~~~ 268 (337)
...+.| +| +++++++++. ...+|.+|.... +. ..+.+ .. -......|.++|
T Consensus 253 P~~i~f~~~P-dg~~aYV~~e~~~~~Lss~V~v~~~d~-g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~ 330 (462)
T 2ece_A 253 ALELRPLHDP-TKLMGFINMVVSLKDLSSSIWLWFYED-GKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISL 330 (462)
T ss_dssp EEEEEECSST-TCCEEEEEEEEETTTCCEEEEEEEEET-TEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECT
T ss_pred cceeEeeECC-CCCEEEEEEeeeccCCCceEEEEEecC-CceeEEEEEeCCCccccccccccccccccCCCceeEEEECC
Confidence 344545 88 8999888887 554587665543 21 01110 00 013468899999
Q ss_pred CCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeee-e-------C------CCceeEEEEccCCCceEEEE
Q 038533 269 QSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMY-S-------A------GSEINQLQWSPAQPDWLAIA 327 (337)
Q Consensus 269 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~-~-------~------~~~v~~~~~~~~~~~l~~~~ 327 (337)
+++.+.++.-..+.|.+||+..+...+ ...... + | ......++++|||++|+++.
T Consensus 331 DGrfLYVSnrg~d~VavfdV~d~~~~~----lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 331 DDKFLYLSLWGIGEVRQYDISNPFKPV----LTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TSCEEEEEETTTTEEEEEECSSTTSCE----EEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCCEEEEEeCCCCEEEEEEecCCCCcE----EEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 999444555567899999997221110 011111 1 0 01358899999999988887
No 222
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.12 E-value=2.4e-07 Score=74.62 Aligned_cols=256 Identities=7% Similarity=-0.001 Sum_probs=146.9
Q ss_pred cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCC
Q 038533 31 GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGD 108 (337)
Q Consensus 31 ~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~ 108 (337)
|.+|..+. .+.|+.++++...........+.......+..++|++++. .++++.. . .|..+++.+
T Consensus 1 ~~~l~~~~-----~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~--------~ly~~d~~~~~I~~~~~~g 67 (267)
T 1npe_A 1 GTHLLFAQ-----TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDK--------VVYWTDISEPSIGRASLHG 67 (267)
T ss_dssp CEEEEEEE-----EEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTT--------EEEEEETTTTEEEEEESSS
T ss_pred CcEEEEEc-----CCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCC--------EEEEEECCCCEEEEEecCC
Confidence 45677776 5678887777543211000000011123467999999765 3555554 3 999999987
Q ss_pred CCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCceeEEEeCC-CcEEEEEc
Q 038533 109 SSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGE-ARVFASVS 187 (337)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~~~~ 187 (337)
.. ....+.... .....+++++..+.++++-...+.|.++++..................+++++ +..|+.+.
T Consensus 68 ~~--~~~~~~~~~-----~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~ 140 (267)
T 1npe_A 68 GE--PTTIIRQDL-----GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTD 140 (267)
T ss_dssp CC--CEEEECTTC-----CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEE
T ss_pred CC--cEEEEECCC-----CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEE
Confidence 63 222222211 45788999983345555555678999999864322111121224568899984 56555554
Q ss_pred C---CCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeecccceeeEE
Q 038533 188 A---DGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAI 264 (337)
Q Consensus 188 ~---dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~ 264 (337)
. .+.|..+++..... ..+... .-.....++++| ++..|+.+......|.++|... ......+.. ......+
T Consensus 141 ~~~~~~~I~~~~~dg~~~-~~~~~~--~~~~P~gia~d~-~~~~lyv~d~~~~~I~~~~~~g-~~~~~~~~~-~~~P~gi 214 (267)
T 1npe_A 141 WNRDNPKIETSHMDGTNR-RILAQD--NLGLPNGLTFDA-FSSQLCWVDAGTHRAECLNPAQ-PGRRKVLEG-LQYPFAV 214 (267)
T ss_dssp CCSSSCEEEEEETTSCCC-EEEECT--TCSCEEEEEEET-TTTEEEEEETTTTEEEEEETTE-EEEEEEEEC-CCSEEEE
T ss_pred CCCCCcEEEEEecCCCCc-EEEEEC--CCCCCcEEEEcC-CCCEEEEEECCCCEEEEEecCC-CceEEEecC-CCCceEE
Confidence 3 46888888865432 222211 124578899998 7777777666655699999875 222222222 2234566
Q ss_pred EeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeC-CCceeEEEEccCCC
Q 038533 265 AWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSA-GSEINQLQWSPAQP 321 (337)
Q Consensus 265 ~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~ 321 (337)
+.. +..++++....+.|..+|...++ ....+... ......+++.|++.
T Consensus 215 ~~d--~~~lyva~~~~~~v~~~d~~~g~-------~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 215 TSY--GKNLYYTDWKTNSVIAMDLAISK-------EMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEE--TTEEEEEETTTTEEEEEETTTTE-------EEEEECCSSCCCCCCEEEECSCC
T ss_pred EEe--CCEEEEEECCCCeEEEEeCCCCC-------ceEEEccccccccceeeecCccC
Confidence 654 34255665567899999987222 11222211 22467788888763
No 223
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.12 E-value=2.8e-08 Score=82.55 Aligned_cols=211 Identities=12% Similarity=0.002 Sum_probs=131.8
Q ss_pred EEEEeCC-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCc
Q 038533 93 LLASSGD-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKE 171 (337)
Q Consensus 93 ~l~~~~~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~ 171 (337)
+.+...+ .+..+|.. ++ .......+. ..+.++...+ ++. +..++.++.|..+|.. ++.+..+......
T Consensus 110 l~v~t~~~~l~~~d~~-g~--~~~~~~~~~-----~~~~~~~~~~-~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~ 178 (330)
T 3hxj_A 110 LYVTSMDGHLYAINTD-GT--EKWRFKTKK-----AIYATPIVSE-DGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAI 178 (330)
T ss_dssp EEEECTTSEEEEECTT-SC--EEEEEECSS-----CCCSCCEECT-TSC-EEEECTTSEEEEECTT-SCEEEEEECSSCC
T ss_pred EEEEecCCEEEEEcCC-CC--EEEEEcCCC-----ceeeeeEEcC-CCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCc
Confidence 5554445 89999988 53 344444333 3455566654 444 6667788999999998 7665555544556
Q ss_pred eeEEEeCCCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCe
Q 038533 172 VYDICWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPV 251 (337)
Q Consensus 172 v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~ 251 (337)
+.++...++..+..++ +.|..+| .+++...... .....+.++...+ ++ .+.+++.++. |..+|.. +..+
T Consensus 179 ~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~---~~~~~~~~~~~~~-~g-~l~v~t~~~g-l~~~~~~--g~~~ 247 (330)
T 3hxj_A 179 TSAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFY---AGYWTVTRPAISE-DG-TIYVTSLDGH-LYAINPD--GTEK 247 (330)
T ss_dssp CSCCEECTTCCEEEES--SSEEEEC-TTSCEEEEEC---CSSCCCSCCEECT-TS-CEEEEETTTE-EEEECTT--SCEE
T ss_pred eeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEc---cCCcceeceEECC-CC-eEEEEcCCCe-EEEECCC--CCEe
Confidence 7777776333455555 7899999 5554332222 1235577777775 54 4555666777 8888743 3445
Q ss_pred EEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEcCCc
Q 038533 252 AELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNK 331 (337)
Q Consensus 252 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 331 (337)
..+......+..+...+++. |..++.+|.|..+|.. . ............+.++...+++. |..++.+|.
T Consensus 248 ~~~~~~~~~~~~~~~~~~g~--l~v~t~~ggl~~~d~~--g------~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~ 316 (330)
T 3hxj_A 248 WRFKTGKRIESSPVIGNTDT--IYFGSYDGHLYAINPD--G------TEKWNFETGSWIIATPVIDENGT-IYFGTRNGK 316 (330)
T ss_dssp EEEECSSCCCSCCEECTTSC--EEEECTTCEEEEECTT--S------CEEEEEECSSCCCSCCEECTTCC-EEEECTTSC
T ss_pred EEeeCCCCccccceEcCCCe--EEEecCCCCEEEECCC--C------cEEEEEEcCCccccceEEcCCCE-EEEEcCCCe
Confidence 55544444445566666664 7778888889999853 1 11222222345577778878884 778888998
Q ss_pred EEEEe
Q 038533 332 MQLLK 336 (337)
Q Consensus 332 i~iw~ 336 (337)
+++..
T Consensus 317 ~~~~~ 321 (330)
T 3hxj_A 317 FYALF 321 (330)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 88754
No 224
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.12 E-value=9e-08 Score=81.20 Aligned_cols=260 Identities=10% Similarity=-0.003 Sum_probs=146.3
Q ss_pred cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCe-EEEecCCCCcccCcCCccEEEEeCC-eEEEEecCC
Q 038533 31 GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPT-KLMFDPNSSSRKSSSNRHLLASSGD-FLRLWDVGD 108 (337)
Q Consensus 31 ~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~-~i~~~~~~~~~~~~~~~~~l~~~~~-~v~vw~~~~ 108 (337)
+..+.+++. ++.|..+|.......... .. ...+. .... .++. +++...+ .|..+|..+
T Consensus 103 ~~~v~v~~~----~g~l~a~d~~tG~~~W~~--~~----~~~~~~~p~~-~~~~---------v~v~~~~g~l~~~d~~t 162 (376)
T 3q7m_A 103 GGHVYIGSE----KAQVYALNTSDGTVAWQT--KV----AGEALSRPVV-SDGL---------VLIHTSNGQLQALNEAD 162 (376)
T ss_dssp TTEEEEEET----TSEEEEEETTTCCEEEEE--EC----SSCCCSCCEE-ETTE---------EEEECTTSEEEEEETTT
T ss_pred CCEEEEEcC----CCEEEEEECCCCCEEEEE--eC----CCceEcCCEE-ECCE---------EEEEcCCCeEEEEECCC
Confidence 667777775 888888766554443332 11 11111 1112 2333 5554445 899999998
Q ss_pred CCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCC-------ceeEEEeC---
Q 038533 109 SSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDK-------EVYDICWG--- 178 (337)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~-------~v~~~~~~--- 178 (337)
++ .+.................... .+..++.+..++.+..+|.++++.+........ .+..+...
T Consensus 163 G~--~~W~~~~~~~~~~~~~~~~~~~---~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~ 237 (376)
T 3q7m_A 163 GA--VKWTVNLDMPSLSLRGESAPTT---AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV 237 (376)
T ss_dssp CC--EEEEEECCC-----CCCCCCEE---ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE
T ss_pred Cc--EEEEEeCCCCceeecCCCCcEE---ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE
Confidence 84 4444443210000000011222 235788888899999999999887655432110 00001111
Q ss_pred CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeec-c
Q 038533 179 EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELER-H 257 (337)
Q Consensus 179 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~-~ 257 (337)
.+..++.++.++.+..+|.++++...... ......+.. .+..+++++.++. |..+|..+ ++.+..... .
T Consensus 238 ~~~~v~~~~~~g~l~~~d~~tG~~~w~~~-----~~~~~~~~~---~~~~l~~~~~~g~-l~~~d~~t-G~~~w~~~~~~ 307 (376)
T 3q7m_A 238 VNGVVFALAYNGNLTALDLRSGQIMWKRE-----LGSVNDFIV---DGNRIYLVDQNDR-VMALTIDG-GVTLWTQSDLL 307 (376)
T ss_dssp ETTEEEEECTTSCEEEEETTTCCEEEEEC-----CCCEEEEEE---ETTEEEEEETTCC-EEEEETTT-CCEEEEECTTT
T ss_pred ECCEEEEEecCcEEEEEECCCCcEEeecc-----CCCCCCceE---ECCEEEEEcCCCe-EEEEECCC-CcEEEeecccC
Confidence 25678888889999999999887443321 123344444 4567777788888 99999988 444444431 1
Q ss_pred cceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEcCCcEEEEe
Q 038533 258 RACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLK 336 (337)
Q Consensus 258 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~ 336 (337)
...+...... +. .|+.++.+|.+.++|...++ ..-........+.......++ .|+.++.+|.|..|+
T Consensus 308 ~~~~~~~~~~--~~-~l~v~~~~g~l~~~d~~tG~-------~~~~~~~~~~~~~~~~~~~~~-~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 308 HRLLTSPVLY--NG-NLVVGDSEGYLHWINVEDGR-------FVAQQKVDSSGFQTEPVAADG-KLLIQAKDGTVYSIT 375 (376)
T ss_dssp TSCCCCCEEE--TT-EEEEECTTSEEEEEETTTCC-------EEEEEECCTTCBCSCCEEETT-EEEEEBTTSCEEEEE
T ss_pred CCcccCCEEE--CC-EEEEEeCCCeEEEEECCCCc-------EEEEEecCCCcceeCCEEECC-EEEEEeCCCEEEEEe
Confidence 2222233332 34 78889999999999998332 111222212222221111234 688888999999887
No 225
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.11 E-value=9e-08 Score=81.72 Aligned_cols=252 Identities=12% Similarity=0.074 Sum_probs=148.7
Q ss_pred cceeeeeCCCceeEEEEe--cceEEEeeee------ccCcceEEEEEecCCCcceecCCCcC----CCCCCCCeEEEecC
Q 038533 13 ENSVTHESPYPLYAMAVC--GQRIAVGSFI------EDYTNRVDVVSFEPESLSIKTHPSLS----FDHPYPPTKLMFDP 80 (337)
Q Consensus 13 ~~~~~~~~~~~v~~~~~s--~~~la~g~~~------~~~d~~i~i~~~~~~~~~~~~~~~~~----~~~~~~i~~i~~~~ 80 (337)
+.+.++...... .++++ +++|+++... +..++.|.++|.......... .+. .........+.|+|
T Consensus 110 ~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I--~v~g~~r~~~g~~P~~~~~sp 186 (426)
T 3c75_H 110 RILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADI--ELPDAPRFLVGTYQWMNALTP 186 (426)
T ss_dssp EEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEE--EETTCCCCCBSCCGGGSEECT
T ss_pred EEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEE--ECCCccccccCCCcceEEEcC
Confidence 334444443333 78999 7777777520 012678888665544322111 110 00123467899999
Q ss_pred CCCcccCcCCccEEEEeC--C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCC
Q 038533 81 NSSSRKSSSNRHLLASSG--D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIE 157 (337)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~--~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~ 157 (337)
|++ .++++.. + .|.+.|+.+. +.+..+.-.. . ....|.....+++.+.||.+.+.+..
T Consensus 187 DGk--------~lyV~n~~~~~~VsVID~~t~--kvv~~I~v~g-------~--~~~~p~g~~~~v~~~~dG~~~~V~~~ 247 (426)
T 3c75_H 187 DNK--------NLLFYQFSPAPAVGVVDLEGK--TFDRMLDVPD-------C--YHIFPASPTVFYMNCRDGSLARVDFA 247 (426)
T ss_dssp TSS--------EEEEEECSSSCEEEEEETTTT--EEEEEEECCS-------E--EEEEEEETTEEEEEETTSSEEEEECC
T ss_pred CCC--------EEEEEecCCCCeEEEEECCCC--eEEEEEEcCC-------c--eeeccCCCcEEEEEcCCCCEEEEECC
Confidence 998 3444432 3 8999999998 5555555421 1 22233233566667778888888875
Q ss_pred Cccchh----hhhccCCce-eEEEeC-CCcEEEEEcCCCeEEEEECCCCCCcee--eecC--CC-----CCCCceEEEee
Q 038533 158 KGVVET----QLIAHDKEV-YDICWG-EARVFASVSADGSVRIFDLRDKEHSTI--IYES--PQ-----PDTPLLRLAWN 222 (337)
Q Consensus 158 ~~~~~~----~~~~~~~~v-~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~--~~~~--~~-----~~~~i~~~~~~ 222 (337)
+++... .+.....++ ..+.+. ++..++.....+.+.+.|+........ .... .. .......+.++
T Consensus 248 ~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s 327 (426)
T 3c75_H 248 DGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYH 327 (426)
T ss_dssp TTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEE
T ss_pred CCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEc
Confidence 554331 122111221 234556 566667777889999999976542110 0000 00 01222347899
Q ss_pred cCCCcEEEEEEec---------CCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEc-CCCcEEEEeCC
Q 038533 223 KQDLRYMATILMD---------SNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVG-DDSQAFIWELP 289 (337)
Q Consensus 223 ~~~~~~l~~~~~d---------~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~iw~~~ 289 (337)
| +++.+++...+ ...|.++|..+ .+.+.++... .....+.|+|+++.++++.. .++.|.++|+.
T Consensus 328 ~-dg~rlyVa~~~~~~gthk~~s~~VsVID~~T-~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~ 401 (426)
T 3c75_H 328 R-QSDRIYLLVDQRDEWKHKAASRFVVVLNAET-GERINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAA 401 (426)
T ss_dssp G-GGTEEEEEEEECCTTCTTSCEEEEEEEETTT-CCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETT
T ss_pred C-CCCEEEEEecccccccccCCCCEEEEEECCC-CeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECC
Confidence 9 77776665432 12499999998 5667777543 35899999999984566655 69999999999
No 226
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.10 E-value=2.1e-09 Score=89.45 Aligned_cols=257 Identities=9% Similarity=-0.000 Sum_probs=148.5
Q ss_pred EEEEe-cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeCCeEEEE
Q 038533 26 AMAVC-GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSGDFLRLW 104 (337)
Q Consensus 26 ~~~~s-~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~~~v~vw 104 (337)
+.... +..|.+++. ++.|..|+ ... ..... . ......+.++...+++. +++...+ |..+
T Consensus 24 ~~~~d~~g~l~v~t~----~~~l~~~d-~~g--~~~~~--~-~~~~~~~~~~~~~~~g~---------l~v~t~~-l~~~ 83 (330)
T 3hxj_A 24 SPILAKNGTIYLGSS----NKNLYAIN-TDG--SVKWF--F-KSGEIIECRPSIGKDGT---------IYFGSDK-VYAI 83 (330)
T ss_dssp CCEECTTSCEECSST----TTTTEEEC-TTS--CEEES--S-CGGGEEEECCEETTTTE---------ECCSSCE-EEEE
T ss_pred CceEccCCeEEEEcC----CCEEEEEC-CCC--cEEEE--E-ecCCCcccceEEecCCc---------EEEecCc-EEEE
Confidence 44454 666777775 78888866 332 22221 1 11223345666666665 5555445 7777
Q ss_pred ecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCceeEEEeCCCcEEE
Q 038533 105 DVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGEARVFA 184 (337)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~l~ 184 (337)
|. ++ +....+.... ......... ...+..++.++.|..+|.. ++...........+.++...++..+.
T Consensus 84 d~-~g--~~~~~~~~~~-----~~~~~~~~~---~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~ 151 (330)
T 3hxj_A 84 NP-DG--TEKWRFDTKK-----AIVSDFTIF---EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIY 151 (330)
T ss_dssp CC-CG--GGGGGSCC----------CCEEEE---TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEE
T ss_pred CC-CC--cEEEEEECCC-----CcccCceEE---CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEE
Confidence 75 44 2332332221 222223332 4567778888999999988 66555554444556666666445577
Q ss_pred EEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeecccceeeEE
Q 038533 185 SVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAI 264 (337)
Q Consensus 185 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~ 264 (337)
.++.++.|..+|.. ++...... . ....+.++...+ ++.+. +++ +. |..+| .+ +..+.........+.++
T Consensus 152 vgt~~~~l~~~d~~-g~~~~~~~-~--~~~~~~~~~~d~-~g~l~-v~t--~~-l~~~d-~~-g~~~~~~~~~~~~~~~~ 220 (330)
T 3hxj_A 152 VGSNDNYLYAINPD-GTEKWRFK-T--NDAITSAASIGK-DGTIY-FGS--DK-VYAIN-PD-GTEKWNFYAGYWTVTRP 220 (330)
T ss_dssp EECTTSEEEEECTT-SCEEEEEE-C--SSCCCSCCEECT-TCCEE-EES--SS-EEEEC-TT-SCEEEEECCSSCCCSCC
T ss_pred EEcCCCEEEEECCC-CCEeEEEe-c--CCCceeeeEEcC-CCEEE-EEe--CE-EEEEC-CC-CcEEEEEccCCcceece
Confidence 78888999999998 55333322 1 234566677765 55544 444 66 99999 54 44455555445668888
Q ss_pred EeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEcCCcEEEEe
Q 038533 265 AWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLK 336 (337)
Q Consensus 265 ~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~ 336 (337)
...+++. |..++.++.|..++.. . ............+..+...+++ .|..++.+|.|..++
T Consensus 221 ~~~~~g~--l~v~t~~~gl~~~~~~--g------~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d 281 (330)
T 3hxj_A 221 AISEDGT--IYVTSLDGHLYAINPD--G------TEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAIN 281 (330)
T ss_dssp EECTTSC--EEEEETTTEEEEECTT--S------CEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEEC
T ss_pred EECCCCe--EEEEcCCCeEEEECCC--C------CEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEEC
Confidence 8888875 5666667888888643 1 1112222222334445566566 466677776776654
No 227
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.10 E-value=1.3e-08 Score=85.39 Aligned_cols=203 Identities=9% Similarity=0.059 Sum_probs=121.9
Q ss_pred CCeeEEEeecCCCCeEEEee--CCCcEEEEeCCCccch------hhhhccCCceeEEEeC-CCcEEEEEcC-----CCeE
Q 038533 127 APLTSFDWNEIEPKRIGTCS--IDTTCTIWDIEKGVVE------TQLIAHDKEVYDICWG-EARVFASVSA-----DGSV 192 (337)
Q Consensus 127 ~~i~~~~~~~~~~~~l~~~~--~dg~i~v~d~~~~~~~------~~~~~~~~~v~~~~~~-~~~~l~~~~~-----dg~i 192 (337)
..+..+++++ +++++++.. .++.++||.+.+++.. .....+...+..++++ +++++++-.. ++.|
T Consensus 17 ~~p~~va~~~-~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTP-DGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECT-TSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECC-CCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 3578999998 888888864 2343555555444422 1111344678999999 5655554433 5789
Q ss_pred EEEECCCCCCceeeecC---CCCCCCceEEEeecCCCcEEEEEE----ecCCEEEEEECCCCCCCeEEeecc--------
Q 038533 193 RIFDLRDKEHSTIIYES---PQPDTPLLRLAWNKQDLRYMATIL----MDSNKVVILDIRSPTLPVAELERH-------- 257 (337)
Q Consensus 193 ~iwd~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~l~~~~----~d~~~i~i~d~~~~~~~~~~~~~~-------- 257 (337)
.+||+.+++....+... ..+......++++| ++..++.+. .++. |.+||+.+ ++....+..|
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~-~~g~~yvtd~~~~~~~~-i~v~d~~~-g~~~r~~~~~~~~~~~~~ 172 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDL-IHNFVYISDPAPDDKAA-LIRVDLQT-GLAARVLQGYPGIAPEDI 172 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEET-TTTEEEEEECCSGGGCE-EEEEETTT-CCEEEECTTCTTTSCCSC
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEec-CCCEEEEEcCccCCCCe-EEEEECCC-CCEEEEecCCCccccccc
Confidence 99999987744333221 11224568999998 444544443 4555 99999876 3333323221
Q ss_pred ---------------------cceeeEEEeCCCCCCeEEEEcCCC-cEEEEeCCCCCCCCC-CCC----CceeeeeCCCc
Q 038533 258 ---------------------RACVNAIAWAPQSRRHICSVGDDS-QAFIWELPLPPVAGP-NGI----DPMSMYSAGSE 310 (337)
Q Consensus 258 ---------------------~~~v~~~~~~~~~~~~l~~~~~dg-~i~iw~~~~~~~~~~-~~~----~~~~~~~~~~~ 310 (337)
...+..++|+|+++ .|+.+..++ .+..++.. ..... ... ......++...
T Consensus 173 ~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~-~ly~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~g~~g~ 249 (343)
T 2qe8_A 173 DLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENE-WLYLSPMHSTSMYRIKSA--DLSNLQLTDAELGSKIERYSEKPI 249 (343)
T ss_dssp CCEETTEECBEECTTSCEECCCCCEEEEEECTTSC-EEEEEESSCSEEEEEEHH--HHTCTTCCHHHHHTTCEEEEECCS
T ss_pred ceeECCEEEEeccCCCceeceecccceeEeccCCC-EEEEEeCCCCeEEEEEHH--HhcCCCCChhhhhcceEecccCCC
Confidence 02357899999998 777776665 44444432 11000 000 01122244556
Q ss_pred eeEEEEccCCCceEEEEcCCcEEEEe
Q 038533 311 INQLQWSPAQPDWLAIAFSNKMQLLK 336 (337)
Q Consensus 311 v~~~~~~~~~~~l~~~~~d~~i~iw~ 336 (337)
...++++++|..+++...++.|.+|+
T Consensus 250 pdgia~d~~G~l~va~~~~~~V~~~d 275 (343)
T 2qe8_A 250 CDGISIDKDHNIYVGDLAHSAIGVIT 275 (343)
T ss_dssp CSCEEECTTCCEEEEEGGGTEEEEEE
T ss_pred CceEEECCCCCEEEEccCCCeEEEEE
Confidence 77899999997777777788999997
No 228
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.10 E-value=2.8e-08 Score=90.97 Aligned_cols=184 Identities=10% Similarity=0.070 Sum_probs=114.5
Q ss_pred EEEeecCCCCeEEEeeCCCc-------------------EEEEeCCCccchhhhhc--cC-------CceeEEEeC-CCc
Q 038533 131 SFDWNEIEPKRIGTCSIDTT-------------------CTIWDIEKGVVETQLIA--HD-------KEVYDICWG-EAR 181 (337)
Q Consensus 131 ~~~~~~~~~~~l~~~~~dg~-------------------i~v~d~~~~~~~~~~~~--~~-------~~v~~~~~~-~~~ 181 (337)
.++++| +..+++.+..++. |..+|.++++.+-.++. |. .++...... +++
T Consensus 239 ~~~~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~ 317 (689)
T 1yiq_A 239 SFAYDP-ELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGK 317 (689)
T ss_dssp CEEEET-TTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTE
T ss_pred ceeEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCc
Confidence 578888 7788888887764 99999999997766543 21 111111111 343
Q ss_pred ---EEEEEcCCCeEEEEECCCCCCceeeecCC-------------------------CC-----------CCCceEEEee
Q 038533 182 ---VFASVSADGSVRIFDLRDKEHSTIIYESP-------------------------QP-----------DTPLLRLAWN 222 (337)
Q Consensus 182 ---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-------------------------~~-----------~~~i~~~~~~ 222 (337)
.++.++.+|.++++|.++++........+ .. ......++++
T Consensus 318 ~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~d 397 (689)
T 1yiq_A 318 PRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYN 397 (689)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEE
T ss_pred EEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceEC
Confidence 78899999999999999988542211110 00 0012237888
Q ss_pred cCCCcEEEEEEe---------------------------------------------cCCEEEEEECCCCCCCeEEeecc
Q 038533 223 KQDLRYMATILM---------------------------------------------DSNKVVILDIRSPTLPVAELERH 257 (337)
Q Consensus 223 ~~~~~~l~~~~~---------------------------------------------d~~~i~i~d~~~~~~~~~~~~~~ 257 (337)
| +..++++... ++. |+.||+.+ ++.+..+..+
T Consensus 398 p-~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~-l~A~D~~t-G~~~W~~~~~ 474 (689)
T 1yiq_A 398 P-DTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGK-LIAWDPVK-QQAAWEVPYV 474 (689)
T ss_dssp T-TTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEE-EEEEETTT-TEEEEEEEES
T ss_pred C-CCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCccee-EEEEECCC-CCeEeEccCC
Confidence 8 6666666533 244 89999988 5555555433
Q ss_pred cceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeee-CCCceeEEEEccCCCceEEEE
Q 038533 258 RACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYS-AGSEINQLQWSPAQPDWLAIA 327 (337)
Q Consensus 258 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~ 327 (337)
.+...-.+...+. +++.++.||.++.||.+.++ ..-.+.. +.....-+.|..+|+.+++..
T Consensus 475 -~~~~~g~~~tagg-lvf~gt~dg~l~a~D~~tG~-------~lw~~~~~~~~~~~p~ty~~~G~qyv~~~ 536 (689)
T 1yiq_A 475 -TIFNGGTLSTAGN-LVFEGSADGRVIAYAADTGE-------KLWEQPAASGVMAAPVTYSVDGEQYVTFM 536 (689)
T ss_dssp -SSCCCCEEEETTT-EEEEECTTSEEEEEETTTCC-------EEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred -CCccCccceECCC-EEEEECCCCcEEEEECCCCc-------cceeeeCCCCcccCceEEEECCEEEEEEE
Confidence 2333335555666 89999999999999999333 2222222 222224467788887666543
No 229
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.09 E-value=1.6e-10 Score=97.78 Aligned_cols=174 Identities=10% Similarity=-0.041 Sum_probs=92.3
Q ss_pred EEEEeCC-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCC-
Q 038533 93 LLASSGD-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDK- 170 (337)
Q Consensus 93 ~l~~~~~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~- 170 (337)
+++.+.+ .|..||..++ +.+..+.. . .+.+..+.. ++..+++++.||.|+.||.++++.+..+..+..
T Consensus 12 v~~gs~dg~v~a~d~~tG--~~~W~~~~-~------~~~s~p~~~-~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~ 81 (369)
T 2hz6_A 12 LFVSTLDGSLHAVSKRTG--SIKWTLKE-D------PVLQVPTHV-EEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPE 81 (369)
T ss_dssp EEEEETTSEEEEEETTTC--CEEEEEEC-C------CSCCCC------CCEEECTTTCCEEEC-----CCSEECSCCHHH
T ss_pred EEEEcCCCEEEEEECCCC--CEEEEecC-C------CceecceEc-CCCEEEEeCCCCEEEEEECCCCceeeeeeccCcc
Confidence 4444446 9999999999 45555554 1 233333334 667888888999999999998876544432211
Q ss_pred cee-EEEeCCCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCC
Q 038533 171 EVY-DICWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTL 249 (337)
Q Consensus 171 ~v~-~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~ 249 (337)
.+. +..+..+..+++++.++.+..||.++++........ . ...++| ++..+++++.++. |+.||.++ ++
T Consensus 82 ~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~----~---~~~~~p-~~~~v~~~~~dg~-v~a~d~~t-G~ 151 (369)
T 2hz6_A 82 LVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSA----F---ADSLSP-STSLLYLGRTEYT-ITMYDTKT-RE 151 (369)
T ss_dssp HHTTCSCC-----CCCCEEEEEEEEECCC------------------------------EEEEEEEEE-EECCCSSS-SS
T ss_pred ccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCC----C---cccccc-cCCEEEEEecCCE-EEEEECCC-CC
Confidence 111 112223557788888999999999998854433221 1 234566 7788888888888 99999998 44
Q ss_pred CeEEeecccceeeEEEeCCCC---CCeEEEEcCCCcEEEEeCC
Q 038533 250 PVAELERHRACVNAIAWAPQS---RRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 250 ~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~dg~i~iw~~~ 289 (337)
.+..+..+ ......+.++. . .+++++.||.|..||..
T Consensus 152 ~~W~~~~~--~~~~~~~~~~~~~~~-~v~~~~~dg~v~a~d~~ 191 (369)
T 2hz6_A 152 LRWNATYF--DYAASLPEDDVDYKM-SHFVSNGDGLVVTVDSE 191 (369)
T ss_dssp CCCEEEEE--EECCBCCCCCTTCCC-CEEEEETSCEEEEECTT
T ss_pred EEEeEecc--cccCccccCCccccc-eEEEECCCCEEEEEECC
Confidence 44444322 12333444432 3 57778889999999998
No 230
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.09 E-value=3.6e-08 Score=90.05 Aligned_cols=270 Identities=8% Similarity=0.038 Sum_probs=154.7
Q ss_pred EecceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC------C-eE
Q 038533 29 VCGQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG------D-FL 101 (337)
Q Consensus 29 ~s~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~------~-~v 101 (337)
+.+..|++++. |+.|..+|.....................+..--...++. +++..+ + .|
T Consensus 126 ~~~~~v~v~~~----dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~---------v~v~~~~~~~~~~g~v 192 (677)
T 1kb0_A 126 LWKGKVYVGAW----DGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGK---------VIIGNGGAEYGVRGYI 192 (677)
T ss_dssp EETTEEEEECT----TSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTE---------EEECCBCTTTCCBCEE
T ss_pred EECCEEEEEcC----CCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCE---------EEEEecccccCCCCEE
Confidence 34567777775 8988887766554444331100000001111100111333 444432 4 89
Q ss_pred EEEecCCCCccceeeecCCCCCc---------------------------ccCCeeEEEeecCCCCeEEEeeCCC-----
Q 038533 102 RLWDVGDSSIEPVAVLNNSKSSE---------------------------FCAPLTSFDWNEIEPKRIGTCSIDT----- 149 (337)
Q Consensus 102 ~vw~~~~~~~~~~~~~~~~~~~~---------------------------~~~~i~~~~~~~~~~~~l~~~~~dg----- 149 (337)
+.+|..+++ .+..+....... .......++++| +..+++.+..++
T Consensus 193 ~a~D~~tG~--~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~-~~~~vy~~~~~~~~w~~ 269 (677)
T 1kb0_A 193 TAYDAETGE--RKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDA-ELNTMYVGTGNGSPWSH 269 (677)
T ss_dssp EEEETTTCC--EEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCH
T ss_pred EEEECCCCc--EEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcC-CCCEEEEECCCCccccC
Confidence 999999984 444443321110 001123578888 778888877664
Q ss_pred --------------cEEEEeCCCccchhhhhc--cC-------CceeEEEeC-CC---cEEEEEcCCCeEEEEECCCCCC
Q 038533 150 --------------TCTIWDIEKGVVETQLIA--HD-------KEVYDICWG-EA---RVFASVSADGSVRIFDLRDKEH 202 (337)
Q Consensus 150 --------------~i~v~d~~~~~~~~~~~~--~~-------~~v~~~~~~-~~---~~l~~~~~dg~i~iwd~~~~~~ 202 (337)
.|..+|.++++.+..++. |. .....+... ++ ..++.++.+|.++++|.++++.
T Consensus 270 ~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~ 349 (677)
T 1kb0_A 270 KVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKF 349 (677)
T ss_dssp HHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCE
Confidence 499999999987765542 21 111122222 45 6889999999999999999986
Q ss_pred ceeeecCCCC--------C------------------------CCceEEEeecCCCcEEEEEEec---------------
Q 038533 203 STIIYESPQP--------D------------------------TPLLRLAWNKQDLRYMATILMD--------------- 235 (337)
Q Consensus 203 ~~~~~~~~~~--------~------------------------~~i~~~~~~~~~~~~l~~~~~d--------------- 235 (337)
.......+.. . ..-..++++| +..++++...+
T Consensus 350 l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp-~~~~~yv~~~~~~~~~~~~~~~~~g~ 428 (677)
T 1kb0_A 350 ISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNP-QTGLVYLPAQNVPVNLMDDKKWEFNQ 428 (677)
T ss_dssp EEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEET-TTTEEEEEEEECCCEEEECTTCCTTC
T ss_pred eccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcC-CCCEEEEeChhcceeeeccccccccc
Confidence 5433221100 0 0112578888 66777665432
Q ss_pred ----------------------------CCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEe
Q 038533 236 ----------------------------SNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWE 287 (337)
Q Consensus 236 ----------------------------~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~ 287 (337)
+. |..||+.+ ++.+..+. +..++....+...+. +++.++.||.+++||
T Consensus 429 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~-l~A~D~~t-G~~~W~~~-~~~~~~~g~~~~~g~-~v~~g~~dg~l~a~D 504 (677)
T 1kb0_A 429 AGPGKPQSGTGWNTAKFFNAEPPKSKPFGR-LLAWDPVA-QKAAWSVE-HVSPWNGGTLTTAGN-VVFQGTADGRLVAYH 504 (677)
T ss_dssp CCTTSTTGGGTCCCCEEECSSCCCSCCEEE-EEEEETTT-TEEEEEEE-ESSSCCCCEEEETTT-EEEEECTTSEEEEEE
T ss_pred ccccccccccccccccccccccCCCCCccE-EEEEeCCC-CcEEeecC-CCCCCcCcceEeCCC-EEEEECCCCcEEEEE
Confidence 44 99999988 54455554 334445555666777 888899999999999
Q ss_pred CCCCCCCCCCCCCceeee-eCCCceeEEEEccCCCceEEE
Q 038533 288 LPLPPVAGPNGIDPMSMY-SAGSEINQLQWSPAQPDWLAI 326 (337)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~ 326 (337)
...++ ....+. ++.....-+.|.++|+.+++.
T Consensus 505 ~~tG~-------~lw~~~~~~~~~~~p~~y~~~G~~~v~~ 537 (677)
T 1kb0_A 505 AATGE-------KLWEAPTGTGVVAAPSTYMVDGRQYVSV 537 (677)
T ss_dssp TTTCC-------EEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred CCCCc-------eeeeeeCCCCcccCCEEEEeCCEEEEEE
Confidence 99333 122222 222233445677888766654
No 231
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.08 E-value=2e-08 Score=85.00 Aligned_cols=195 Identities=10% Similarity=0.039 Sum_probs=122.2
Q ss_pred cCCCC-eEEEeeCCCcEEEEeCCCc----cchhhhh------c-cCCceeEEEeCCCcEEEEEcCC------CeEEEEEC
Q 038533 136 EIEPK-RIGTCSIDTTCTIWDIEKG----VVETQLI------A-HDKEVYDICWGEARVFASVSAD------GSVRIFDL 197 (337)
Q Consensus 136 ~~~~~-~l~~~~~dg~i~v~d~~~~----~~~~~~~------~-~~~~v~~~~~~~~~~l~~~~~d------g~i~iwd~ 197 (337)
+ +.+ +++.+..++.|.++|+.+. +..+++. . .......+...++.+++++..+ |.|.++|.
T Consensus 93 ~-~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 I-ERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp C-CSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECT
T ss_pred c-cCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEEC
Confidence 5 444 5566677889999998755 3333331 1 1123455666643477766555 78999999
Q ss_pred CCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEE------------------ecCCEEEEEECCCCCCCeEEeecc--
Q 038533 198 RDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATIL------------------MDSNKVVILDIRSPTLPVAELERH-- 257 (337)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~------------------~d~~~i~i~d~~~~~~~~~~~~~~-- 257 (337)
.+.+..............-+.+.|+| +++.+++.. ..+.+|.+||+.+ .+.+.++...
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p-~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~-~k~~~tI~vg~~ 249 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNL-PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK-RKRIHSLTLGEE 249 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEET-TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT-TEEEEEEESCTT
T ss_pred CCCeEEEEEccCCCCccccceEEECC-CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCC-CcEeeEEecCCC
Confidence 99886665543322233456688899 888888875 2244599999987 5556666542
Q ss_pred cceeeEEEe--CCCCCCeEEEEc------CCCcEEEEeCCCCCCCCCCCCCce-----eee-----------eCCCceeE
Q 038533 258 RACVNAIAW--APQSRRHICSVG------DDSQAFIWELPLPPVAGPNGIDPM-----SMY-----------SAGSEINQ 313 (337)
Q Consensus 258 ~~~v~~~~~--~~~~~~~l~~~~------~dg~i~iw~~~~~~~~~~~~~~~~-----~~~-----------~~~~~v~~ 313 (337)
......+.| +|+++ ++++++ .+++|.+|..+.+.... .... ... +.......
T Consensus 250 g~~P~~i~f~~~Pdg~-~aYV~~e~~~~~Lss~V~v~~~d~g~~~~---~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~ 325 (462)
T 2ece_A 250 NRMALELRPLHDPTKL-MGFINMVVSLKDLSSSIWLWFYEDGKWNA---EKVIEIPAEPLEGNLPEILKPFKAVPPLVTD 325 (462)
T ss_dssp EEEEEEEEECSSTTCC-EEEEEEEEETTTCCEEEEEEEEETTEEEE---EEEEEECCEECCSSCCGGGGGGTEECCCCCC
T ss_pred CCccceeEeeECCCCC-EEEEEEeeeccCCCceEEEEEecCCceeE---EEEEeCCCccccccccccccccccCCCceeE
Confidence 123445555 99999 555444 66788877665211000 0000 000 00245789
Q ss_pred EEEccCCCceEEEEc-CCcEEEEeC
Q 038533 314 LQWSPAQPDWLAIAF-SNKMQLLKV 337 (337)
Q Consensus 314 ~~~~~~~~~l~~~~~-d~~i~iw~l 337 (337)
+.+||||++|.++.. .+.|.++++
T Consensus 326 I~lS~DGrfLYVSnrg~d~VavfdV 350 (462)
T 2ece_A 326 IDISLDDKFLYLSLWGIGEVRQYDI 350 (462)
T ss_dssp EEECTTSCEEEEEETTTTEEEEEEC
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEe
Confidence 999999999988874 689999875
No 232
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.03 E-value=8.9e-08 Score=80.35 Aligned_cols=242 Identities=11% Similarity=-0.020 Sum_probs=143.7
Q ss_pred cceeeeeCCCceeEEEEe--cceEEEeeee------ccCcceEEEEEecCCCcceecCCCcCCC------CCCCCeEEEe
Q 038533 13 ENSVTHESPYPLYAMAVC--GQRIAVGSFI------EDYTNRVDVVSFEPESLSIKTHPSLSFD------HPYPPTKLMF 78 (337)
Q Consensus 13 ~~~~~~~~~~~v~~~~~s--~~~la~g~~~------~~~d~~i~i~~~~~~~~~~~~~~~~~~~------~~~~i~~i~~ 78 (337)
+.+.++...... .++++ +++|.++... +..++.|.+||.......... ..+ .......+.+
T Consensus 57 ~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I----~v~~~~~~~~g~~P~~ia~ 131 (368)
T 1mda_H 57 VTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADI----ELPDAPRFSVGPRVHIIGN 131 (368)
T ss_dssp EEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEE----EETTSCSCCBSCCTTSEEE
T ss_pred eEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEE----ECCCccccccCCCcceEEE
Confidence 444555543323 78999 7788877621 012688999776654433222 111 1134678999
Q ss_pred cCCCCcccCcCCccEEEEe-C-C-eEEE--EecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEE
Q 038533 79 DPNSSSRKSSSNRHLLASS-G-D-FLRL--WDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTI 153 (337)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~-~-~-~v~v--w~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v 153 (337)
+||++ .++++. + . .+.+ +|..+ +..+... .. ....|.....+++.+.||.+.+
T Consensus 132 SpDGk--------~lyVan~~~~~~v~V~~iD~~t-----v~~i~v~------~~---~~~~p~g~~~~~~~~~dg~~~~ 189 (368)
T 1mda_H 132 CASSA--------CLLFFLFGSSAAAGLSVPGASD-----DQLTKSA------SC---FHIHPGAAATHYLGSCPASLAA 189 (368)
T ss_dssp CTTSS--------CEEEEECSSSCEEEEEETTTEE-----EEEEECS------SC---CCCEEEETTEEECCCCTTSCEE
T ss_pred cCCCC--------EEEEEccCCCCeEEEEEEchhh-----ceEEECC------Cc---eEEccCCCeEEEEEcCCCCEEE
Confidence 99998 344443 2 3 6777 88876 2233221 11 1123323345666677888888
Q ss_pred EeCCC-----ccchh----hhhccCCceeEEEeCCCcEEEEEcCCCeEEEEECCCCCCceee-ecCC--------CCCCC
Q 038533 154 WDIEK-----GVVET----QLIAHDKEVYDICWGEARVFASVSADGSVRIFDLRDKEHSTII-YESP--------QPDTP 215 (337)
Q Consensus 154 ~d~~~-----~~~~~----~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~--------~~~~~ 215 (337)
.|+.+ ++... .+.....+. ...++..++..+. +.+.+.|+......... .... .....
T Consensus 190 vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g 265 (368)
T 1mda_H 190 SDLAAAPAAAGIVGAQCTGAQNCSSQAA---QANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAG 265 (368)
T ss_dssp EECCSSCCCCEECCCCSCTTSCBCSCCE---EETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECS
T ss_pred EECccccccCCeEEEEeeeeeeCCCCcc---ccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCc
Confidence 89876 44331 122222333 3445566666666 99999999754321110 0000 00112
Q ss_pred ceEEEeecCCCcEEEEEEe-c--------CCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEc-CCCcEEE
Q 038533 216 LLRLAWNKQDLRYMATILM-D--------SNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVG-DDSQAFI 285 (337)
Q Consensus 216 i~~~~~~~~~~~~l~~~~~-d--------~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~i 285 (337)
...+.++| +++.++++.. . +. +.++|+.+ .+.+..+.... ....++|+|+++.++++.. .++.|.+
T Consensus 266 ~~~v~~s~-dg~~lyV~~~~~~~~~~~~~~~-~~ViD~~t-~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsV 341 (368)
T 1mda_H 266 FQMVAKLK-NTDGIMILTVEHSRSCLAAAEN-TSSVTASV-GQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDI 341 (368)
T ss_dssp SSCEEEET-TTTEEEEEEEECSSCTTSCEEE-EEEEESSS-CCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEE
T ss_pred ceeeEEcC-CCCEEEEEeccccCcccccCCC-EEEEECCC-CeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEE
Confidence 22378999 8877776544 2 34 77999998 55566665433 6899999999986677777 6999999
Q ss_pred EeCC
Q 038533 286 WELP 289 (337)
Q Consensus 286 w~~~ 289 (337)
+|+.
T Consensus 342 ID~~ 345 (368)
T 1mda_H 342 YDAA 345 (368)
T ss_dssp EESS
T ss_pred EECC
Confidence 9999
No 233
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.02 E-value=9e-07 Score=71.18 Aligned_cols=223 Identities=8% Similarity=-0.011 Sum_probs=131.1
Q ss_pred EEEEeCCeEEEEecCCCCccc---eeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccC
Q 038533 93 LLASSGDFLRLWDVGDSSIEP---VAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHD 169 (337)
Q Consensus 93 ~l~~~~~~v~vw~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~ 169 (337)
++.+..+.|+.+++....... ...+.... ..+..++|++.++.++++-..++.|..+++........+....
T Consensus 4 l~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~-----~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~ 78 (267)
T 1npe_A 4 LLFAQTGKIERLPLERNTMKKTEAKAFLHIPA-----KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDL 78 (267)
T ss_dssp EEEEEEEEEEEEEESSSCBCGGGCEEEEEEEE-----EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTC
T ss_pred EEEEcCCeEEEEEecCcccccccceeeecCCC-----CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCC
Confidence 333333488889988764221 11122111 4567899998344555555567899999987654322222222
Q ss_pred CceeEEEeC-CC-cEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEec--CCEEEEEECC
Q 038533 170 KEVYDICWG-EA-RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMD--SNKVVILDIR 245 (337)
Q Consensus 170 ~~v~~~~~~-~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d--~~~i~i~d~~ 245 (337)
.....++++ .+ .++++-...+.|.++++..... ..+... .......++++| ++..|+.+... ...|..+++.
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~~~~--~~~~P~~i~vd~-~~g~lyv~~~~~~~~~I~~~~~d 154 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-RVLFDT--GLVNPRGIVTDP-VRGNLYWTDWNRDNPKIETSHMD 154 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECS--SCSSEEEEEEET-TTTEEEEEECCSSSCEEEEEETT
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-EEEEEC--CCCCccEEEEee-CCCEEEEEECCCCCcEEEEEecC
Confidence 467889998 44 4555556678999999875442 222221 124568899998 66666555543 2348888876
Q ss_pred CCCCCeEEee-cccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceE
Q 038533 246 SPTLPVAELE-RHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWL 324 (337)
Q Consensus 246 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 324 (337)
. . ....+. ........++++|++..++++-...+.|.+++.. . ...............++.. +..++
T Consensus 155 g-~-~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~--g------~~~~~~~~~~~~P~gi~~d--~~~ly 222 (267)
T 1npe_A 155 G-T-NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPA--Q------PGRRKVLEGLQYPFAVTSY--GKNLY 222 (267)
T ss_dssp S-C-CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETT--E------EEEEEEEECCCSEEEEEEE--TTEEE
T ss_pred C-C-CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecC--C------CceEEEecCCCCceEEEEe--CCEEE
Confidence 4 2 223332 2234578999999877355666677899999987 2 1112222222334566654 44566
Q ss_pred EEE-cCCcEEEEe
Q 038533 325 AIA-FSNKMQLLK 336 (337)
Q Consensus 325 ~~~-~d~~i~iw~ 336 (337)
.+. .++.|.+++
T Consensus 223 va~~~~~~v~~~d 235 (267)
T 1npe_A 223 YTDWKTNSVIAMD 235 (267)
T ss_dssp EEETTTTEEEEEE
T ss_pred EEECCCCeEEEEe
Confidence 555 456777665
No 234
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.99 E-value=1.5e-07 Score=74.87 Aligned_cols=196 Identities=11% Similarity=0.058 Sum_probs=132.2
Q ss_pred CCeEEEecCCCCcccCcCCccEEEEeC---C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeC
Q 038533 72 PPTKLMFDPNSSSRKSSSNRHLLASSG---D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSI 147 (337)
Q Consensus 72 ~i~~i~~~~~~~~~~~~~~~~~l~~~~---~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~ 147 (337)
....+.|++++. ++++.+ + .|.++|+.+++ .+..+.-.. . .....+++. .+.+.++...
T Consensus 22 f~~Gl~~~~dg~---------Lyvstg~~~~s~v~~iD~~tg~--v~~~i~l~~-~---~fgeGi~~~--g~~lyv~t~~ 84 (266)
T 2iwa_A 22 FTQGLVYAENDT---------LFESTGLYGRSSVRQVALQTGK--VENIHKMDD-S---YFGEGLTLL--NEKLYQVVWL 84 (266)
T ss_dssp CEEEEEECSTTE---------EEEEECSTTTCEEEEEETTTCC--EEEEEECCT-T---CCEEEEEEE--TTEEEEEETT
T ss_pred CcccEEEeCCCe---------EEEECCCCCCCEEEEEECCCCC--EEEEEecCC-C---cceEEEEEe--CCEEEEEEec
Confidence 357999999876 666654 3 99999999995 444443211 0 122356664 3456666667
Q ss_pred CCcEEEEeCCCccchhhhhccCCceeEEEeCCCcEEEEEcCCCeEEEEECCCCCCceeeecCCC--CCCCceEEEeecCC
Q 038533 148 DTTCTIWDIEKGVVETQLIAHDKEVYDICWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQ--PDTPLLRLAWNKQD 225 (337)
Q Consensus 148 dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~ 225 (337)
++.+.++|..+.+.+.++......-..++. +++.++++..++.|.++|..+.+....+..... .-.....+.|. +
T Consensus 85 ~~~v~viD~~t~~v~~~i~~g~~~g~glt~-Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~--d 161 (266)
T 2iwa_A 85 KNIGFIYDRRTLSNIKNFTHQMKDGWGLAT-DGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI--N 161 (266)
T ss_dssp CSEEEEEETTTTEEEEEEECCSSSCCEEEE-CSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--T
T ss_pred CCEEEEEECCCCcEEEEEECCCCCeEEEEE-CCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE--C
Confidence 899999999999888777532122234444 566666666789999999999886655543211 11235677876 4
Q ss_pred CcEEEEEEecCCEEEEEECCCCCCCeEEeeccc-------------ceeeEEEeCCCCCCeEEEEcCCCcEEEEeCC
Q 038533 226 LRYMATILMDSNKVVILDIRSPTLPVAELERHR-------------ACVNAIAWAPQSRRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 226 ~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~-------------~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 289 (337)
+ .+.+.......|.+.|..+ ++.+..+.... ...+.++|+|+++.+++++...+.+.+.++.
T Consensus 162 g-~lyvn~~~~~~V~vID~~t-g~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~ 236 (266)
T 2iwa_A 162 G-EVWANIWQTDCIARISAKD-GTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLH 236 (266)
T ss_dssp T-EEEEEETTSSEEEEEETTT-CCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred C-EEEEecCCCCeEEEEECCC-CcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEe
Confidence 5 4555554333499999998 55666665321 2458999999998688888888999998887
No 235
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.99 E-value=3.4e-10 Score=95.82 Aligned_cols=200 Identities=11% Similarity=0.005 Sum_probs=102.5
Q ss_pred cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCC
Q 038533 31 GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGD 108 (337)
Q Consensus 31 ~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~ 108 (337)
++.+++++. |+.|..||.......... .. +.+.+..+..++. ++++++ + .|+.||..+
T Consensus 9 ~~~v~~gs~----dg~v~a~d~~tG~~~W~~------~~-~~~~s~p~~~~g~---------~~v~~s~dg~l~a~d~~t 68 (369)
T 2hz6_A 9 ETLLFVSTL----DGSLHAVSKRTGSIKWTL------KE-DPVLQVPTHVEEP---------AFLPDPNDGSLYTLGSKN 68 (369)
T ss_dssp TTEEEEEET----TSEEEEEETTTCCEEEEE------EC-CCSCCCC-----C---------CEEECTTTCCEEEC----
T ss_pred CCEEEEEcC----CCEEEEEECCCCCEEEEe------cC-CCceecceEcCCC---------EEEEeCCCCEEEEEECCC
Confidence 778888886 999999887765554443 11 3455555556666 666654 5 999999988
Q ss_pred CCccceeeecCCCCCc-ccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCceeEEEeC-CCcEEEEE
Q 038533 109 SSIEPVAVLNNSKSSE-FCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWG-EARVFASV 186 (337)
Q Consensus 109 ~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~ 186 (337)
++ .+..+..+.... ...++ +. .+..+++++.++.|+.||.++|+.+..+..+.. ..++ .+..++++
T Consensus 69 G~--~~w~~~~~~~~~~~~sp~----~~--~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~----~~~~p~~~~v~~~ 136 (369)
T 2hz6_A 69 NE--GLTKLPFTIPELVQASPC----RS--SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA----DSLSPSTSLLYLG 136 (369)
T ss_dssp -C--CSEECSCCHHHHHTTCSC----C-------CCCCEEEEEEEEECCC--------------------------EEEE
T ss_pred Cc--eeeeeeccCccccccCce----Ee--cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc----ccccccCCEEEEE
Confidence 84 333333221000 00111 11 345678888899999999999998877765431 2233 57788899
Q ss_pred cCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCC---CcEEEEEEecCCEEEEEECCCCCCCeEEeeccccee-e
Q 038533 187 SADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQD---LRYMATILMDSNKVVILDIRSPTLPVAELERHRACV-N 262 (337)
Q Consensus 187 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v-~ 262 (337)
+.++.|+.||.++++........ ......+.+ + ...+++++.++. |+.||.++ ++.+..... ..++ .
T Consensus 137 ~~dg~v~a~d~~tG~~~W~~~~~-----~~~~~~~~~-~~~~~~~v~~~~~dg~-v~a~d~~t-G~~~W~~~~-~~pv~~ 207 (369)
T 2hz6_A 137 RTEYTITMYDTKTRELRWNATYF-----DYAASLPED-DVDYKMSHFVSNGDGL-VVTVDSES-GDVLWIQNY-ASPVVA 207 (369)
T ss_dssp EEEEEEECCCSSSSSCCCEEEEE-----EECCBCCCC-CTTCCCCEEEEETSCE-EEEECTTT-CCEEEEEEC-SSCEEE
T ss_pred ecCCEEEEEECCCCCEEEeEecc-----cccCccccC-CccccceEEEECCCCE-EEEEECCC-CcEEEEecC-CCceEE
Confidence 99999999999988754433211 011222222 2 156777788887 99999988 555555543 3333 3
Q ss_pred EEEeCCCCC
Q 038533 263 AIAWAPQSR 271 (337)
Q Consensus 263 ~~~~~~~~~ 271 (337)
...+++++.
T Consensus 208 ~~~~~~dg~ 216 (369)
T 2hz6_A 208 FYVWQREGL 216 (369)
T ss_dssp EEECTTSSC
T ss_pred EEEecCCce
Confidence 345555553
No 236
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.98 E-value=1.7e-07 Score=85.64 Aligned_cols=226 Identities=11% Similarity=0.032 Sum_probs=134.6
Q ss_pred EEEEeCC-eEEEEecCCCCccceeeecCC-CCCcccCCeeE-EEeecCCCCeEEEeeC------CCcEEEEeCCCccchh
Q 038533 93 LLASSGD-FLRLWDVGDSSIEPVAVLNNS-KSSEFCAPLTS-FDWNEIEPKRIGTCSI------DTTCTIWDIEKGVVET 163 (337)
Q Consensus 93 ~l~~~~~-~v~vw~~~~~~~~~~~~~~~~-~~~~~~~~i~~-~~~~~~~~~~l~~~~~------dg~i~v~d~~~~~~~~ 163 (337)
+++...+ .|..+|..++ +.+..+... .... ...+.. ... .+..+++++. +|.|+.+|.++++.+.
T Consensus 131 v~v~~~dg~l~alD~~tG--~~~W~~~~~~~~~~-~~~~~~~p~v---~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W 204 (677)
T 1kb0_A 131 VYVGAWDGRLIALDAATG--KEVWHQNTFEGQKG-SLTITGAPRV---FKGKVIIGNGGAEYGVRGYITAYDAETGERKW 204 (677)
T ss_dssp EEEECTTSEEEEEETTTC--CEEEEEETTTTCCS-SCBCCSCCEE---ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred EEEEcCCCEEEEEECCCC--CEEeeecCCcCcCc-CcccccCcEE---ECCEEEEEecccccCCCCEEEEEECCCCcEEE
Confidence 4444446 9999999999 455555543 1000 001111 111 2345555543 6899999999998665
Q ss_pred hhhccCC--------------------------------ceeEEEeC-CCcEEEEEcCCC-------------------e
Q 038533 164 QLIAHDK--------------------------------EVYDICWG-EARVFASVSADG-------------------S 191 (337)
Q Consensus 164 ~~~~~~~--------------------------------~v~~~~~~-~~~~l~~~~~dg-------------------~ 191 (337)
.+..... ....++++ ++++++.+..++ .
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~s 284 (677)
T 1kb0_A 205 RWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLAS 284 (677)
T ss_dssp EEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTE
T ss_pred EeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEE
Confidence 4432111 11245666 567888777664 5
Q ss_pred EEEEECCCCCCceeeecCCCCC-------CCceEEEeecCCC---cEEEEEEecCCEEEEEECCCCCCCeEEeeccc---
Q 038533 192 VRIFDLRDKEHSTIIYESPQPD-------TPLLRLAWNKQDL---RYMATILMDSNKVVILDIRSPTLPVAELERHR--- 258 (337)
Q Consensus 192 i~iwd~~~~~~~~~~~~~~~~~-------~~i~~~~~~~~~~---~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~--- 258 (337)
|..+|.++++..-..... .+. ....-+.... ++ ..++.++.++. ++++|.++ ++++..+....
T Consensus 285 v~AlD~~TG~~~W~~~~~-~~d~wd~~~~~~p~l~~~~~-dG~~~~~l~~~~~~G~-l~~lD~~t-G~~l~~~~~~~~~~ 360 (677)
T 1kb0_A 285 IVALDPDTGKYKWHYQET-PGDNWDYTSTQPMILADIKI-AGKPRKVILHAPKNGF-FFVLDRTN-GKFISAKNFVPVNW 360 (677)
T ss_dssp EEEECTTTCCEEEEEESS-TTCCSCCCCCSCCEEEEEEE-TTEEEEEEEECCTTSE-EEEEETTT-CCEEEEEESSCCSS
T ss_pred EEEEECCCCCEEEEEecC-CCcccccccCCCcEEEeccc-CCcEeeEEEEECCCCE-EEEEECCC-CCEeccccccccCc
Confidence 999999999865544332 111 1122233333 56 67888888887 99999988 55554433110
Q ss_pred --------cee------------------------eEEEeCCCCCCeEEEEcC---------------------------
Q 038533 259 --------ACV------------------------NAIAWAPQSRRHICSVGD--------------------------- 279 (337)
Q Consensus 259 --------~~v------------------------~~~~~~~~~~~~l~~~~~--------------------------- 279 (337)
.++ ..++++|+.. ++++...
T Consensus 361 ~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~-~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 439 (677)
T 1kb0_A 361 ASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTG-LVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTG 439 (677)
T ss_dssp EEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTT-EEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGT
T ss_pred ccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCC-EEEEeChhcceeeecccccccccccccccccccc
Confidence 011 1567888887 7766532
Q ss_pred ----------------CCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 280 ----------------DSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 280 ----------------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
.|.|..||+..++ ..-...+..++....+...+..++.++.||.+++|++
T Consensus 440 ~~~g~~~~~~~~~~~~~g~l~A~D~~tG~--------~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~ 505 (677)
T 1kb0_A 440 WNTAKFFNAEPPKSKPFGRLLAWDPVAQK--------AAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHA 505 (677)
T ss_dssp CCCCEEECSSCCCSCCEEEEEEEETTTTE--------EEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEET
T ss_pred cccccccccccCCCCCccEEEEEeCCCCc--------EEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEEC
Confidence 2678888887222 2222234445556666777777888888999999974
No 237
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.97 E-value=2.1e-08 Score=84.16 Aligned_cols=213 Identities=8% Similarity=-0.084 Sum_probs=127.1
Q ss_pred eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEee----------CCCcEEEEeCCCccchhhhhcc-
Q 038533 100 FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCS----------IDTTCTIWDIEKGVVETQLIAH- 168 (337)
Q Consensus 100 ~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~----------~dg~i~v~d~~~~~~~~~~~~~- 168 (337)
.|.++|..+. +.+..+.... .+ .+.++| +++++.++. .++.|.+||+.+++.+.++...
T Consensus 47 ~vsvID~~t~--~v~~~i~vG~-----~P--~i~~sp-Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~ 116 (368)
T 1mda_H 47 ENWVSCAGCG--VTLGHSLGAF-----LS--LAVAGH-SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPD 116 (368)
T ss_dssp EEEEEETTTT--EEEEEEEECT-----TC--EEEECT-TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETT
T ss_pred eEEEEECCCC--eEEEEEeCCC-----CC--ceEECC-CCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCC
Confidence 6779999998 5666666543 55 799999 888888876 3688999999999988887533
Q ss_pred ------CCceeEEEeC-CCcEEEEEcC--CCeEEE--EECCCCCCceeeecC---------------CCCCCCceEEEe-
Q 038533 169 ------DKEVYDICWG-EARVFASVSA--DGSVRI--FDLRDKEHSTIIYES---------------PQPDTPLLRLAW- 221 (337)
Q Consensus 169 ------~~~v~~~~~~-~~~~l~~~~~--dg~i~i--wd~~~~~~~~~~~~~---------------~~~~~~i~~~~~- 221 (337)
......++++ ++++++++.. +..+.+ +|+.+ ...+... ....+.+..+..
T Consensus 117 ~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~ 193 (368)
T 1mda_H 117 APRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLA 193 (368)
T ss_dssp SCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECC
T ss_pred ccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECc
Confidence 1245689999 7888888864 457888 88865 1111100 000011111111
Q ss_pred -------------------------ecCCCcEEEEEEecCCEEEEEECCCCCC-CeEEeec-------c---cceeeEEE
Q 038533 222 -------------------------NKQDLRYMATILMDSNKVVILDIRSPTL-PVAELER-------H---RACVNAIA 265 (337)
Q Consensus 222 -------------------------~~~~~~~l~~~~~d~~~i~i~d~~~~~~-~~~~~~~-------~---~~~v~~~~ 265 (337)
.+ ++..++..+. +. +.+.|...... .+..+.. + ......++
T Consensus 194 ~~~~~~~~v~~~~t~~i~vg~~P~~~~-~~~~~~~vs~-~~-V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~ 270 (368)
T 1mda_H 194 AAPAAAGIVGAQCTGAQNCSSQAAQAN-YPGMLVWAVA-SS-ILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVA 270 (368)
T ss_dssp SSCCCCEECCCCSCTTSCBCSCCEEET-TTTEEEECBS-SC-CEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEE
T ss_pred cccccCCeEEEEeeeeeeCCCCccccc-cCCEEEEEcC-CE-EEEEECCCCcceEEEEEEeccccccccccccCcceeeE
Confidence 22 2233333333 55 77777754211 1111110 0 11122278
Q ss_pred eCCCCCCeEEEE-c---C-----CCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEE-EE-cCCcEEE
Q 038533 266 WAPQSRRHICSV-G---D-----DSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLA-IA-FSNKMQL 334 (337)
Q Consensus 266 ~~~~~~~~l~~~-~---~-----dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~-~d~~i~i 334 (337)
++|+++ .++.+ . . ++.+.++|+. +.. ......-......++|+||++.++. .. .++.|.+
T Consensus 271 ~s~dg~-~lyV~~~~~~~~~~~~~~~~~ViD~~--t~~------vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsV 341 (368)
T 1mda_H 271 KLKNTD-GIMILTVEHSRSCLAAAENTSSVTAS--VGQ------TSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDI 341 (368)
T ss_dssp EETTTT-EEEEEEEECSSCTTSCEEEEEEEESS--SCC------EEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEE
T ss_pred EcCCCC-EEEEEeccccCcccccCCCEEEEECC--CCe------EEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEE
Confidence 999998 55543 3 2 2356699998 422 1211111225899999999986554 45 4899999
Q ss_pred EeC
Q 038533 335 LKV 337 (337)
Q Consensus 335 w~l 337 (337)
+|+
T Consensus 342 ID~ 344 (368)
T 1mda_H 342 YDA 344 (368)
T ss_dssp EES
T ss_pred EEC
Confidence 985
No 238
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.94 E-value=1.1e-05 Score=75.53 Aligned_cols=288 Identities=11% Similarity=0.014 Sum_probs=165.0
Q ss_pred CCceeEEEEe-cceEEEeeeeccCcceEEEEEecCCCcceecCCCc----CCCCCCCCeEEEecCCCCcccCcCCccEEE
Q 038533 21 PYPLYAMAVC-GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSL----SFDHPYPPTKLMFDPNSSSRKSSSNRHLLA 95 (337)
Q Consensus 21 ~~~v~~~~~s-~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~----~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~ 95 (337)
...|.++... ...|.+|+. ++.+.+|+... ..+...... ..-....|.++...+++. +.+
T Consensus 214 ~~~i~~i~~d~~g~lwigt~----~~Gl~~~~~~~--~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~---------lWi 278 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWVATE----GAGLFLINPKT--KEIKNYLHSPSNPKSISSNYIRSLAMDSQNR---------LWI 278 (795)
T ss_dssp CCCEEEEEEEETTEEEEEEB----SSCEEEEETTT--TEEEEECCCTTCTTSCSCSBEEEEEECTTSC---------EEE
T ss_pred CCeeEEEEEcCCCCEEEEEC----CCCeEEEeCCC--CeEEEeecCCCCccccCCCeEEEEEEcCCCC---------EEE
Confidence 3457777777 556666764 55577765443 222210000 011235688999888887 655
Q ss_pred EeCCeEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhh-------cc
Q 038533 96 SSGDFLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLI-------AH 168 (337)
Q Consensus 96 ~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~-------~~ 168 (337)
...+.|.+|+..++..............-....|.++...+ ++. |-.|+.++-|..++..++... .+. ..
T Consensus 279 gt~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~-~g~-lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~l~ 355 (795)
T 4a2l_A 279 GTFNDLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDS-QGG-MWLGTYFGGLNYYHPIRNRFK-NIRNIPYKNSLS 355 (795)
T ss_dssp EESSCEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECT-TSC-EEEEESSSCEEEECGGGGSSE-EECCCTTSSSCS
T ss_pred EeCChhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeC-CcC-EEEEECCCCeEEeCCCcccce-EEcCCCCCCCCC
Confidence 54447888998776322111100000011125799998876 655 555667778999987654321 111 12
Q ss_pred CCceeEEEeCCCcEEEEEcCCCeEEEEECCCCCCceeeecC-----CCCCCCceEEEeecCCCcEEEEEEecCCEEEEEE
Q 038533 169 DKEVYDICWGEARVFASVSADGSVRIFDLRDKEHSTIIYES-----PQPDTPLLRLAWNKQDLRYMATILMDSNKVVILD 243 (337)
Q Consensus 169 ~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d 243 (337)
...|.++...+...|..|+.++.|..||..+.+........ ......|.++...+ ++..|.+|+.+++ |..||
T Consensus 356 ~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~~lWigt~~~G-l~~~d 433 (795)
T 4a2l_A 356 DNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDE-KKSLVYIGTHAGG-LSILH 433 (795)
T ss_dssp CSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEET-TTTEEEEEETTTE-EEEEE
T ss_pred CCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcC-CCCEEEEEeCcCc-eeEEe
Confidence 34688888884445667888878999998876532221111 01235788998876 6764667777777 99999
Q ss_pred CCCCCCCeEEee-----cccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEcc
Q 038533 244 IRSPTLPVAELE-----RHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSP 318 (337)
Q Consensus 244 ~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 318 (337)
..+ ++ ...+. .....|.++...+++. +.+ |+. +.+.+|+.......... ............|.++...+
T Consensus 434 ~~~-~~-~~~~~~~~~~l~~~~v~~i~~d~~g~-lwi-gt~-~Gl~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~i~~d~ 507 (795)
T 4a2l_A 434 RNS-GQ-VENFNQRNSQLVNENVYAILPDGEGN-LWL-GTL-SALVRFNPEQRSFTTIE-KEKDGTPVVSKQITTLFRDS 507 (795)
T ss_dssp TTT-CC-EEEECTTTSCCSCSCEEEEEECSSSC-EEE-EES-SCEEEEETTTTEEEECC-BCTTCCBCCCCCEEEEEECT
T ss_pred CCC-Cc-EEEeecCCCCcCCCeeEEEEECCCCC-EEE-Eec-CceeEEeCCCCeEEEcc-ccccccccCCceEEEEEECC
Confidence 876 32 33332 1235788999888887 444 444 45888887622110000 00000011235689999999
Q ss_pred CCCceEEEEcCCcEEEEe
Q 038533 319 AQPDWLAIAFSNKMQLLK 336 (337)
Q Consensus 319 ~~~~l~~~~~d~~i~iw~ 336 (337)
+|..++++ .+ .|..|+
T Consensus 508 ~g~lWigt-~~-Gl~~~~ 523 (795)
T 4a2l_A 508 HKRLWIGG-EE-GLSVFK 523 (795)
T ss_dssp TCCEEEEE-SS-CEEEEE
T ss_pred CCCEEEEe-CC-ceEEEe
Confidence 98755544 34 455443
No 239
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.94 E-value=5.7e-07 Score=71.48 Aligned_cols=192 Identities=9% Similarity=0.037 Sum_probs=124.1
Q ss_pred eeEEEeecCCCCeEEEeeC--CCcEEEEeCCCccchhhhhccC-CceeEEEeCCCcEEEEEcCCCeEEEEECCCCCCcee
Q 038533 129 LTSFDWNEIEPKRIGTCSI--DTTCTIWDIEKGVVETQLIAHD-KEVYDICWGEARVFASVSADGSVRIFDLRDKEHSTI 205 (337)
Q Consensus 129 i~~~~~~~~~~~~l~~~~~--dg~i~v~d~~~~~~~~~~~~~~-~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 205 (337)
...++|++ ++.++++.+. ++.|+++|+.+++.+..+.... .....+++..+.+.++.-.++.+.++|..+.+....
T Consensus 23 ~~Gl~~~~-dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~ 101 (266)
T 2iwa_A 23 TQGLVYAE-NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKN 101 (266)
T ss_dssp EEEEEECS-TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEE
T ss_pred cccEEEeC-CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEE
Confidence 57899998 6655555543 5799999999999877654222 122355665556666667789999999998876665
Q ss_pred eecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeeccc--c---eeeEEEeCCCCCCeEEEEcCC
Q 038533 206 IYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHR--A---CVNAIAWAPQSRRHICSVGDD 280 (337)
Q Consensus 206 ~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~--~---~v~~~~~~~~~~~~l~~~~~d 280 (337)
+... . .. ...+++ +++.++++..++. |.++|..+ .+.+..+.... . .++.+.|. ++. +.+....+
T Consensus 102 i~~g-~--~~--g~glt~-Dg~~l~vs~gs~~-l~viD~~t-~~v~~~I~Vg~~~~p~~~~nele~~-dg~-lyvn~~~~ 171 (266)
T 2iwa_A 102 FTHQ-M--KD--GWGLAT-DGKILYGSDGTSI-LYEIDPHT-FKLIKKHNVKYNGHRVIRLNELEYI-NGE-VWANIWQT 171 (266)
T ss_dssp EECC-S--SS--CCEEEE-CSSSEEEECSSSE-EEEECTTT-CCEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETTS
T ss_pred EECC-C--CC--eEEEEE-CCCEEEEECCCCe-EEEEECCC-CcEEEEEEECCCCcccccceeEEEE-CCE-EEEecCCC
Confidence 5322 1 11 133445 6777777665555 99999988 44555554221 1 35678888 665 66666678
Q ss_pred CcEEEEeCCCCCCCCCCCCCceeeee-----------CCCceeEEEEccCCCceEEEE-cCCcEEEEe
Q 038533 281 SQAFIWELPLPPVAGPNGIDPMSMYS-----------AGSEINQLQWSPAQPDWLAIA-FSNKMQLLK 336 (337)
Q Consensus 281 g~i~iw~~~~~~~~~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~l~~~~-~d~~i~iw~ 336 (337)
+.|.+.|...++... ...+.+ .....+.++|+|+++.++.++ ..+.+.+.+
T Consensus 172 ~~V~vID~~tg~V~~-----~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~ 234 (266)
T 2iwa_A 172 DCIARISAKDGTLLG-----WILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIK 234 (266)
T ss_dssp SEEEEEETTTCCEEE-----EEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEE
T ss_pred CeEEEEECCCCcEEE-----EEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEE
Confidence 899999998332110 111111 013468999999987777665 567776654
No 240
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.92 E-value=1.6e-06 Score=73.42 Aligned_cols=261 Identities=9% Similarity=-0.036 Sum_probs=143.5
Q ss_pred cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCC----C--CCCCeEEEecCCCCcccCcCCccEEEEeCC-eEEE
Q 038533 31 GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFD----H--PYPPTKLMFDPNSSSRKSSSNRHLLASSGD-FLRL 103 (337)
Q Consensus 31 ~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~----~--~~~i~~i~~~~~~~~~~~~~~~~~l~~~~~-~v~v 103 (337)
++.+.+++. ++.|..+|.......... ..... + ...+.+.-...++. +++...+ .|..
T Consensus 53 ~~~v~~~~~----~g~v~a~d~~tG~~~W~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---------v~v~~~~g~l~a 117 (376)
T 3q7m_A 53 DNVVYAADR----AGLVKALNADDGKEIWSV--SLAEKDGWFSKEPALLSGGVTVSGGH---------VYIGSEKAQVYA 117 (376)
T ss_dssp TTEEEEECT----TSEEEEEETTTCCEEEEE--ECCC---CCSCCCCCEEEEEEEETTE---------EEEEETTSEEEE
T ss_pred CCEEEEEcC----CCeEEEEEccCCceeeee--cCccccccccccCcccccCceEeCCE---------EEEEcCCCEEEE
Confidence 667777775 788888776554443332 11000 0 12222222223343 5555556 9999
Q ss_pred EecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCce-----eEEEeC
Q 038533 104 WDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEV-----YDICWG 178 (337)
Q Consensus 104 w~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v-----~~~~~~ 178 (337)
+|..+++ .+....... ........ .+..+++++.++.|..+|.++++.+.......... .....
T Consensus 118 ~d~~tG~--~~W~~~~~~-----~~~~~p~~---~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~- 186 (376)
T 3q7m_A 118 LNTSDGT--VAWQTKVAG-----EALSRPVV---SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT- 186 (376)
T ss_dssp EETTTCC--EEEEEECSS-----CCCSCCEE---ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE-
T ss_pred EECCCCC--EEEEEeCCC-----ceEcCCEE---ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE-
Confidence 9999984 444443322 11111222 24577888889999999999998766554322111 11122
Q ss_pred CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCC-CC---C---c-eEEEeecCCCcEEEEEEecCCEEEEEECCCCCCC
Q 038533 179 EARVFASVSADGSVRIFDLRDKEHSTIIYESPQP-DT---P---L-LRLAWNKQDLRYMATILMDSNKVVILDIRSPTLP 250 (337)
Q Consensus 179 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~---~---i-~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~ 250 (337)
.+..++.+..++.+..+|..+++........... .. . + ..... .+..+++++.++. +..+|.++ ++.
T Consensus 187 ~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~v~~~~~~g~-l~~~d~~t-G~~ 261 (376)
T 3q7m_A 187 AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV---VNGVVFALAYNGN-LTALDLRS-GQI 261 (376)
T ss_dssp ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE---ETTEEEEECTTSC-EEEEETTT-CCE
T ss_pred ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE---ECCEEEEEecCcE-EEEEECCC-CcE
Confidence 2557888888999999999988754443221000 00 0 1 11111 3466777777888 99999987 444
Q ss_pred eEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeee-eCCCceeEEEEccCCCceEEEEcC
Q 038533 251 VAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMY-SAGSEINQLQWSPAQPDWLAIAFS 329 (337)
Q Consensus 251 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d 329 (337)
+..... .....+... +. .++.++.++.+..+|...++. .-... .....+...... +..++.++.+
T Consensus 262 ~w~~~~--~~~~~~~~~--~~-~l~~~~~~g~l~~~d~~tG~~-------~w~~~~~~~~~~~~~~~~--~~~l~v~~~~ 327 (376)
T 3q7m_A 262 MWKREL--GSVNDFIVD--GN-RIYLVDQNDRVMALTIDGGVT-------LWTQSDLLHRLLTSPVLY--NGNLVVGDSE 327 (376)
T ss_dssp EEEECC--CCEEEEEEE--TT-EEEEEETTCCEEEEETTTCCE-------EEEECTTTTSCCCCCEEE--TTEEEEECTT
T ss_pred EeeccC--CCCCCceEE--CC-EEEEEcCCCeEEEEECCCCcE-------EEeecccCCCcccCCEEE--CCEEEEEeCC
Confidence 444332 223344433 44 678888899999999883321 11111 011112222222 3357777777
Q ss_pred CcEEEEe
Q 038533 330 NKMQLLK 336 (337)
Q Consensus 330 ~~i~iw~ 336 (337)
|.|.+++
T Consensus 328 g~l~~~d 334 (376)
T 3q7m_A 328 GYLHWIN 334 (376)
T ss_dssp SEEEEEE
T ss_pred CeEEEEE
Confidence 7777765
No 241
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.87 E-value=7.2e-07 Score=81.67 Aligned_cols=150 Identities=11% Similarity=0.060 Sum_probs=85.2
Q ss_pred EEEEeCC-eEEEEecCCCCccceeeecCCCCCcccCCee-EEEeecCCCCeEEEee------CCCcEEEEeCCCccchhh
Q 038533 93 LLASSGD-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLT-SFDWNEIEPKRIGTCS------IDTTCTIWDIEKGVVETQ 164 (337)
Q Consensus 93 ~l~~~~~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~l~~~~------~dg~i~v~d~~~~~~~~~ 164 (337)
+++.+.+ .|..+|..+++ .+..+...........+. +.... ++ .++++. .+|.|+.||.++|+.+-.
T Consensus 124 v~v~~~dg~l~AlDa~TG~--~~W~~~~~~~~~~~~~~~~sP~v~--~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 198 (689)
T 1yiq_A 124 VYVGVLDGRLEAIDAKTGQ--RAWSVDTRADHKRSYTITGAPRVV--NG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWR 198 (689)
T ss_dssp EEEECTTSEEEEEETTTCC--EEEEEECCSCTTSCCBCCSCCEEE--TT-EEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred EEEEccCCEEEEEECCCCC--EeeeecCcCCCCCCccccCCcEEE--CC-EEEEEeCCCccCCCCEEEEEECCCCcEEEE
Confidence 4444446 99999999994 444444320000000111 01111 33 444443 368999999999986654
Q ss_pred hhcc-------------------------------CCceeEEEeC-CCcEEEEEcCCCe-------------------EE
Q 038533 165 LIAH-------------------------------DKEVYDICWG-EARVFASVSADGS-------------------VR 193 (337)
Q Consensus 165 ~~~~-------------------------------~~~v~~~~~~-~~~~l~~~~~dg~-------------------i~ 193 (337)
+... ......++++ ..++++.+..++. |.
T Consensus 199 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~ 278 (689)
T 1yiq_A 199 FYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIV 278 (689)
T ss_dssp EESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEE
T ss_pred ecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEE
Confidence 4310 0011245666 4678888887764 99
Q ss_pred EEECCCCCCceeeecCCCCC-------CCceEEEeecCCCc---EEEEEEecCCEEEEEECCCCCCCe
Q 038533 194 IFDLRDKEHSTIIYESPQPD-------TPLLRLAWNKQDLR---YMATILMDSNKVVILDIRSPTLPV 251 (337)
Q Consensus 194 iwd~~~~~~~~~~~~~~~~~-------~~i~~~~~~~~~~~---~l~~~~~d~~~i~i~d~~~~~~~~ 251 (337)
.+|.++++..-.....+ +. .+........ ++. .++.++.+|. ++++|.++ ++++
T Consensus 279 AlD~~TG~~~W~~~~~~-~d~wd~~~~~~~~l~d~~~-~G~~~~~v~~~~~~G~-l~~lD~~t-G~~l 342 (689)
T 1yiq_A 279 AVNADTGEYVWHYQTTP-GDAWDYTATQHMILAELPI-DGKPRKVLMQAPKNGF-FYVIDRAT-GELL 342 (689)
T ss_dssp EEETTTCCEEEEEESST-TCCSCCCCCSCEEEEEEEE-TTEEEEEEEECCTTSE-EEEEETTT-CCEE
T ss_pred EEEccCCceeEeeecCC-cccccccCCCCcEEEeecc-CCcEEEEEEEECCCCe-EEEEECCC-CCEe
Confidence 99999998655443321 11 1122222222 444 6788888887 99999988 5444
No 242
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.87 E-value=1.4e-05 Score=74.64 Aligned_cols=277 Identities=9% Similarity=0.014 Sum_probs=163.2
Q ss_pred eeEEEEe-cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeCC-eE
Q 038533 24 LYAMAVC-GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSGD-FL 101 (337)
Q Consensus 24 v~~~~~s-~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~~-~v 101 (337)
|.++... ...|.+|+. ++.|..|+... ..+.... .......|.++...+++. +.+...+ .+
T Consensus 175 i~~i~~d~~g~lwigt~----~~Gl~~~~~~~--~~~~~~~--~~~~~~~i~~i~~d~~g~---------lwigt~~~Gl 237 (795)
T 4a2l_A 175 IASTLYRQGDQIYIGTS----TDGLYTYSITQ--KTFEKVI--PILGTKQIQAILQQSPTR---------IWVATEGAGL 237 (795)
T ss_dssp CEEEEEEETTEEEEEES----SSCEEEEETTT--CCEEECC------CCCEEEEEEEETTE---------EEEEEBSSCE
T ss_pred eEEEEECCCCCEEEEEC----CCCEEEEeCCC--CeEEEec--CCCCCCeeEEEEEcCCCC---------EEEEECCCCe
Confidence 7777776 555666763 45677765443 3332210 112346788888888886 6666544 88
Q ss_pred EEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhh-------hccCCceeE
Q 038533 102 RLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQL-------IAHDKEVYD 174 (337)
Q Consensus 102 ~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~-------~~~~~~v~~ 174 (337)
.+||..+++......-...........|.++...+ ++.+.+ |+.+ -|.+||..+++..... ......|.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~ 314 (795)
T 4a2l_A 238 FLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDS-QNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRS 314 (795)
T ss_dssp EEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECT-TSCEEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEE
T ss_pred EEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcC-CCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEE
Confidence 89998776322111100000001125689998876 665544 4445 5888998766532211 112356899
Q ss_pred EEeCCCcEEEEEcCCCeEEEEECCCCCCceeeecC---CCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCe
Q 038533 175 ICWGEARVFASVSADGSVRIFDLRDKEHSTIIYES---PQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPV 251 (337)
Q Consensus 175 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~ 251 (337)
+..++...+..|+.++.|..|+............. ......|.++...+ ++. |.+|+.+++ |..||..+ .. .
T Consensus 315 i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~-~g~-lWiGt~~~G-l~~~~~~~-~~-~ 389 (795)
T 4a2l_A 315 IFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDK-DKN-LWIGTNDGG-LNLYNPIT-QR-F 389 (795)
T ss_dssp EEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECT-TSC-EEEEESSSC-EEEECTTT-CC-E
T ss_pred EEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECC-CCC-EEEEECCCC-eEEEcCCC-Cc-E
Confidence 98884445677888788999987665432221110 01235688888876 554 555777777 99999876 22 2
Q ss_pred EEee---------cccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeee-----eCCCceeEEEEc
Q 038533 252 AELE---------RHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMY-----SAGSEINQLQWS 317 (337)
Q Consensus 252 ~~~~---------~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~ 317 (337)
..+. .....|.++...+++. +|..|+.++.|..||...+. ...+. .....|.++...
T Consensus 390 ~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-~lWigt~~~Gl~~~d~~~~~--------~~~~~~~~~~l~~~~v~~i~~d 460 (795)
T 4a2l_A 390 TSYTLQEDESARGIGSNNIKAVYVDEKKS-LVYIGTHAGGLSILHRNSGQ--------VENFNQRNSQLVNENVYAILPD 460 (795)
T ss_dssp EEECCC------CCSCSCEEEEEEETTTT-EEEEEETTTEEEEEETTTCC--------EEEECTTTSCCSCSCEEEEEEC
T ss_pred EEEecCCCCcccCCCCccEEEEEEcCCCC-EEEEEeCcCceeEEeCCCCc--------EEEeecCCCCcCCCeeEEEEEC
Confidence 2221 1135688888888876 58888887889999987222 11111 134578999998
Q ss_pred cCCCceEEEEcCCcEEEEe
Q 038533 318 PAQPDWLAIAFSNKMQLLK 336 (337)
Q Consensus 318 ~~~~~l~~~~~d~~i~iw~ 336 (337)
+++..++++ .+ .+.+|+
T Consensus 461 ~~g~lwigt-~~-Gl~~~~ 477 (795)
T 4a2l_A 461 GEGNLWLGT-LS-ALVRFN 477 (795)
T ss_dssp SSSCEEEEE-SS-CEEEEE
T ss_pred CCCCEEEEe-cC-ceeEEe
Confidence 888644444 44 455554
No 243
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.86 E-value=4.3e-06 Score=69.17 Aligned_cols=239 Identities=15% Similarity=0.141 Sum_probs=133.7
Q ss_pred CCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCC------------CcccCCeeEEEeecC
Q 038533 72 PPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKS------------SEFCAPLTSFDWNEI 137 (337)
Q Consensus 72 ~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~------------~~~~~~i~~~~~~~~ 137 (337)
...+++|.+++. ++.++. + .|..|+..++............. ......+..+++.+
T Consensus 20 ~p~~i~~d~~g~---------~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~- 89 (322)
T 2fp8_A 20 APNSFTFDSTNK---------GFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNL- 89 (322)
T ss_dssp CCCCEECCTTCS---------SEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEET-
T ss_pred CceEEEEcCCCC---------EEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcC-
Confidence 357788999887 666665 4 89889887653221111000000 00013577899986
Q ss_pred CCCeEEEeeCCCcEEEEeCCCccchhhhh-----ccCCceeEEEeCC--CcEEEEEcC-----------------CCeEE
Q 038533 138 EPKRIGTCSIDTTCTIWDIEKGVVETQLI-----AHDKEVYDICWGE--ARVFASVSA-----------------DGSVR 193 (337)
Q Consensus 138 ~~~~l~~~~~dg~i~v~d~~~~~~~~~~~-----~~~~~v~~~~~~~--~~~l~~~~~-----------------dg~i~ 193 (337)
+...|.++...+.|..+|..+++. ..+. ........+++.+ ++++++-.. ++.|.
T Consensus 90 ~~g~l~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~ 168 (322)
T 2fp8_A 90 QNNQLYIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLI 168 (322)
T ss_dssp TTTEEEEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEE
T ss_pred CCCcEEEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEE
Confidence 344555555555688898775542 1111 1113467788875 444444322 36788
Q ss_pred EEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCC-CCeEEeecccceeeEEEeCCCCCC
Q 038533 194 IFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPT-LPVAELERHRACVNAIAWAPQSRR 272 (337)
Q Consensus 194 iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~ 272 (337)
.||..+++........ .....++|+| +++.|+++......|..|++.... .....+....+ ...+++.++|.
T Consensus 169 ~~d~~~~~~~~~~~~~----~~p~gia~~~-dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~- 241 (322)
T 2fp8_A 169 KYDPSTKETTLLLKEL----HVPGGAEVSA-DSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGH- 241 (322)
T ss_dssp EEETTTTEEEEEEEEE----SCCCEEEECT-TSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSC-
T ss_pred EEeCCCCEEEEeccCC----ccCcceEECC-CCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCC-
Confidence 8888766532222211 2346799999 888777665543349999987521 11222221223 68899999998
Q ss_pred eEEEEcC----------CCcEEEEeCCCCCCCCCCCCCceeeeeC----CCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 273 HICSVGD----------DSQAFIWELPLPPVAGPNGIDPMSMYSA----GSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 273 ~l~~~~~----------dg~i~iw~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
+.++... .+.|..+|.. +.....+... ...+..+++ .++..+++...++.|..+++
T Consensus 242 l~va~~~~~~~~~~~~~~~~v~~~d~~--------G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~ 311 (322)
T 2fp8_A 242 FWVSSSEELDGNMHGRVDPKGIKFDEF--------GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVY 311 (322)
T ss_dssp EEEEEEEETTSSTTSCEEEEEEEECTT--------SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC
T ss_pred EEEEecCcccccccCCCccEEEEECCC--------CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEec
Confidence 6665543 3556677654 1112222221 234667776 45644444446778887764
No 244
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.86 E-value=8.2e-07 Score=77.93 Aligned_cols=230 Identities=13% Similarity=0.004 Sum_probs=145.8
Q ss_pred CCeEEEecC-----CCCcccCcCCccEEEEeCC--eEEEEecCCCCcccee--eecCCCCCcccCCeeEEEe-e-cCCCC
Q 038533 72 PPTKLMFDP-----NSSSRKSSSNRHLLASSGD--FLRLWDVGDSSIEPVA--VLNNSKSSEFCAPLTSFDW-N-EIEPK 140 (337)
Q Consensus 72 ~i~~i~~~~-----~~~~~~~~~~~~~l~~~~~--~v~vw~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~-~-~~~~~ 140 (337)
.......|. |++ .++++..+ .|.+.|+.+. ++.. .+... ..+..+++ + | ++.
T Consensus 86 d~hh~~~s~t~g~~DG~--------~lfVnd~~~~rVavIdl~t~--~~~~ii~ip~g------~~phg~~~~~~p-~~~ 148 (595)
T 1fwx_A 86 DLHHVHMSFTEGKYDGR--------FLFMNDKANTRVARVRCDVM--KCDAILEIPNA------KGIHGLRPQKWP-RSN 148 (595)
T ss_dssp CBCCEEEEEETTEEEEE--------EEEEEETTTTEEEEEETTTT--EEEEEEECSSC------CSEEEEEECCSS-BCS
T ss_pred CCCccccCCCCCCcCCC--------EEEEEcCCCCEEEEEECCCc--eEeeEEeCCCC------CCCcceeeeecC-CCc
Confidence 344456665 666 44554443 8999999998 4444 44322 44778887 4 6 888
Q ss_pred eEEEee------------------CCCcEEEEeCCCccchhhhhccCCceeEEEeC-CCcEEEEEcCCC-----------
Q 038533 141 RIGTCS------------------IDTTCTIWDIEKGVVETQLIAHDKEVYDICWG-EARVFASVSADG----------- 190 (337)
Q Consensus 141 ~l~~~~------------------~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg----------- 190 (337)
++++++ .++.+.+.|..+.+...++.-.. ....++++ +++++++.+.+.
T Consensus 149 ~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~ 227 (595)
T 1fwx_A 149 YVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTA 227 (595)
T ss_dssp EEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTC
T ss_pred EEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccc
Confidence 888874 34579999999887776665322 34566777 677777776442
Q ss_pred ---------------------------eEEEEECCC--CCC-ceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEE
Q 038533 191 ---------------------------SVRIFDLRD--KEH-STIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVV 240 (337)
Q Consensus 191 ---------------------------~i~iwd~~~--~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~ 240 (337)
.|.+.|.++ ++. ...+... ....++.++| +++++++++....+|.
T Consensus 228 ~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg----~~PhGv~~sP-DGk~v~V~~~~s~~Vs 302 (595)
T 1fwx_A 228 AEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIA----NNPHGCNMAP-DKKHLCVAGKLSPTVT 302 (595)
T ss_dssp CSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEE----SSCCCEEECT-TSSEEEEECTTSSBEE
T ss_pred cccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecC----CCceEEEEcC-CCCEEEEeCCCCCeEE
Confidence 477778776 433 2233222 3567899999 9999888876665699
Q ss_pred EEECCCCC-----------CCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCC--C-CCCCCCCce-eee
Q 038533 241 ILDIRSPT-----------LPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPP--V-AGPNGIDPM-SMY 305 (337)
Q Consensus 241 i~d~~~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~--~-~~~~~~~~~-~~~ 305 (337)
++|+.+.. ....... -......++|+|+|. ..++.-.|++|.+||+.... . ... ..... .+.
T Consensus 303 Vid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~aF~~dG~-aY~t~~ldsqV~kwdi~~a~~~~~g~~-~~~vi~kid 379 (595)
T 1fwx_A 303 VLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTAFDGRGN-AYTSLFLDSQVVKWNIEDAIRAYAGEK-VDPIKDKLD 379 (595)
T ss_dssp EEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEEECTTSE-EEEEETTTTEEEEEEHHHHHHHHHTCS-CCCEEEEEE
T ss_pred EEECcccccccccccCcccceEEEcC-CCCCcceEEECCCCe-EEEEEecCCcEEEEEhhHhhhhhcccc-cceeEEEee
Confidence 99998531 1122222 224568899999994 88888899999999998210 0 000 00111 222
Q ss_pred eCCCc-----eeEEEEccCCCceEEEE
Q 038533 306 SAGSE-----INQLQWSPAQPDWLAIA 327 (337)
Q Consensus 306 ~~~~~-----v~~~~~~~~~~~l~~~~ 327 (337)
.|-.+ -..+..+|||++|++..
T Consensus 380 V~yqpGh~~~~~g~t~~~DGk~l~~~N 406 (595)
T 1fwx_A 380 VHYQPGHLKTVMGETLDATNDWLVCLS 406 (595)
T ss_dssp CSSCEEEEEETTTTSTTCCSSEEEEEE
T ss_pred cccccccceeccceEeCCCCCEEEEcC
Confidence 22221 12334579999998876
No 245
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.85 E-value=1.7e-05 Score=66.30 Aligned_cols=219 Identities=8% Similarity=-0.053 Sum_probs=129.7
Q ss_pred EEEEeC-CeEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCc
Q 038533 93 LLASSG-DFLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKE 171 (337)
Q Consensus 93 ~l~~~~-~~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~ 171 (337)
+|..+. ..|+..++.... ....+... ..+..++|++.++.++.+-...+.|..+++........+......
T Consensus 46 ~ll~~~~~~I~~i~~~g~~--~~~~~~~~------~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~ 117 (349)
T 3v64_C 46 VLLFANRIDIRQVLPHRSE--YTLLLNNL------ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLES 117 (349)
T ss_dssp EEEEECBSCEEEECTTSCC--EEEEECSC------SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSC
T ss_pred eeEeecccceEEEeCCCCe--eEEeecCC------CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCC
Confidence 444444 488888887763 22333332 457899999745555556557788999998765433222222234
Q ss_pred eeEEEeC--CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecC-CEEEEEECCCCC
Q 038533 172 VYDICWG--EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS-NKVVILDIRSPT 248 (337)
Q Consensus 172 v~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~-~~i~i~d~~~~~ 248 (337)
...++++ .++++++-...+.|.+.++........ ... .-.....++++| .+..|+...... ..|..+++.. .
T Consensus 118 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l-~~~--~l~~P~~iavdp-~~g~ly~td~~~~~~I~r~~~dG-~ 192 (349)
T 3v64_C 118 PGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVL-LWQ--SLEKPRAIALHP-MEGTIYWTDWGNTPRIEASSMDG-S 192 (349)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE-ECT--TCSCEEEEEEET-TTTEEEEEECSSSCEEEEEETTS-C
T ss_pred ccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEE-EeC--CCCCcceEEEec-CcCeEEEeccCCCCEEEEEeCCC-C
Confidence 5677777 456666777788999999876543322 221 224568999998 555555544443 3488888764 2
Q ss_pred CCeEEe-ecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCce-eeeeCCCceeEEEEccCCCceEEE
Q 038533 249 LPVAEL-ERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPM-SMYSAGSEINQLQWSPAQPDWLAI 326 (337)
Q Consensus 249 ~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~ 326 (337)
....+ ...-...+.++++|++..+.++-...+.|..+++. . .... ...........+++. .+ .++.+
T Consensus 193 -~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~d--G------~~~~~~~~~~~~~P~giav~-~~-~ly~t 261 (349)
T 3v64_C 193 -GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD--G------SHRKAVISQGLPHPFAITVF-ED-SLYWT 261 (349)
T ss_dssp -SCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT--S------CSCEEEECSSCSSEEEEEEE-TT-EEEEE
T ss_pred -CcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCC--C------CceEEEEeCCCCCceEEEEE-CC-EEEEe
Confidence 22333 22234578999998776355565667889999987 2 1122 222223455677773 33 34444
Q ss_pred E-cCCcEEEE
Q 038533 327 A-FSNKMQLL 335 (337)
Q Consensus 327 ~-~d~~i~iw 335 (337)
. ..+.|..+
T Consensus 262 d~~~~~V~~~ 271 (349)
T 3v64_C 262 DWHTKSINSA 271 (349)
T ss_dssp ETTTTEEEEE
T ss_pred cCCCCeEEEE
Confidence 3 44555544
No 246
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.83 E-value=1.2e-05 Score=68.38 Aligned_cols=220 Identities=8% Similarity=-0.052 Sum_probs=130.6
Q ss_pred EEEEeC-CeEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCc
Q 038533 93 LLASSG-DFLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKE 171 (337)
Q Consensus 93 ~l~~~~-~~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~ 171 (337)
+|..+. ..|+.+++.... ....+... ..+..++|++.++.++.+-...+.|..+++........+......
T Consensus 89 ~l~~~~~~~I~~i~~~~~~--~~~~~~~~------~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~ 160 (386)
T 3v65_B 89 VLLFANRIDIRQVLPHRSE--YTLLLNNL------ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLES 160 (386)
T ss_dssp EEEEECBSCEEEECTTSCC--CEEEECSC------SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSC
T ss_pred eeEeecCccceeeccCCCc--EEEEecCC------CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCC
Confidence 444444 488888888763 22333332 457899999745556666567788999998765432222222234
Q ss_pred eeEEEeC--CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecC-CEEEEEECCCCC
Q 038533 172 VYDICWG--EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS-NKVVILDIRSPT 248 (337)
Q Consensus 172 v~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~-~~i~i~d~~~~~ 248 (337)
...++++ .++++++-...+.|.+.++........ ... .-.....++++| .+..|+...... ..|..+++.. .
T Consensus 161 p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l-~~~--~l~~P~giavdp-~~g~ly~td~~~~~~I~r~~~dG-~ 235 (386)
T 3v65_B 161 PGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVL-LWQ--SLEKPRAIALHP-MEGTIYWTDWGNTPRIEASSMDG-S 235 (386)
T ss_dssp CCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEE-ECS--SCSCEEEEEEET-TTTEEEEEECSSSCEEEEEETTS-C
T ss_pred ccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEe-ecC--CCCCCcEEEEEc-CCCeEEEeccCCCCEEEEEeCCC-C
Confidence 5667776 456666767788899999876543322 221 224568999998 555555554443 3488888864 2
Q ss_pred CCeEEe-ecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCce-eeeeCCCceeEEEEccCCCceEEE
Q 038533 249 LPVAEL-ERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPM-SMYSAGSEINQLQWSPAQPDWLAI 326 (337)
Q Consensus 249 ~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~ 326 (337)
....+ ...-...+.|+++|++..+.++-+..+.|..+++. . .... ...........+++. .+ .++.+
T Consensus 236 -~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~d--G------~~~~~~~~~~~~~P~giav~-~~-~ly~t 304 (386)
T 3v65_B 236 -GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD--G------SHRKAVISQGLPHPFAITVF-ED-SLYWT 304 (386)
T ss_dssp -SCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTT--S------CSCEEEECSSCSSEEEEEEE-TT-EEEEE
T ss_pred -CcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCC--C------CeeEEEEECCCCCceEEEEE-CC-EEEEe
Confidence 22333 22234578999998776355666667889999887 2 1122 222223456777773 33 34444
Q ss_pred E-cCCcEEEEe
Q 038533 327 A-FSNKMQLLK 336 (337)
Q Consensus 327 ~-~d~~i~iw~ 336 (337)
. ..+.|..++
T Consensus 305 d~~~~~V~~~~ 315 (386)
T 3v65_B 305 DWHTKSINSAN 315 (386)
T ss_dssp ETTTTEEEEEE
T ss_pred eCCCCeEEEEE
Confidence 3 455555543
No 247
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.82 E-value=1.1e-06 Score=69.18 Aligned_cols=185 Identities=8% Similarity=0.004 Sum_probs=121.8
Q ss_pred CeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCce--eEEEeCCCcEEEEEcCCCeEEEEECCCCCCcee
Q 038533 128 PLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEV--YDICWGEARVFASVSADGSVRIFDLRDKEHSTI 205 (337)
Q Consensus 128 ~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v--~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 205 (337)
-...+.|+ ++.++++.+.+|.|+++|+++++.+..+ . .... ..+++..+.+.+..-.++.+.+||..+.+....
T Consensus 56 ftqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 56 FTQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp CEEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred ccceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEE
Confidence 34688887 4678888888999999999999987776 2 2333 336666566666777799999999999887666
Q ss_pred eecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeecc--cc---eeeEEEeCCCCCCeEEEEcCC
Q 038533 206 IYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERH--RA---CVNAIAWAPQSRRHICSVGDD 280 (337)
Q Consensus 206 ~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~--~~---~v~~~~~~~~~~~~l~~~~~d 280 (337)
+... ..-..+++ +++.|+.+..++. |.++|..+ .+.+..+... .. .++.+.|. +|. +.+..-.+
T Consensus 132 i~~~----~eGwGLt~---Dg~~L~vSdGs~~-l~~iDp~T-~~v~~~I~V~~~g~~v~~lNeLe~~-dG~-lyanvw~s 200 (268)
T 3nok_A 132 TRYS----GEGWGLCY---WNGKLVRSDGGTM-LTFHEPDG-FALVGAVQVKLRGQPVELINELECA-NGV-IYANIWHS 200 (268)
T ss_dssp EECS----SCCCCEEE---ETTEEEEECSSSE-EEEECTTT-CCEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETTC
T ss_pred EeCC----CceeEEec---CCCEEEEECCCCE-EEEEcCCC-CeEEEEEEeCCCCcccccccccEEe-CCE-EEEEECCC
Confidence 6543 22245554 5677777766665 99999988 4455555432 22 34567776 666 66666678
Q ss_pred CcEEEEeCCCCCCCCCCCCCcee------eeeCCCceeEEEEccCCCceEEEE
Q 038533 281 SQAFIWELPLPPVAGPNGIDPMS------MYSAGSEINQLQWSPAQPDWLAIA 327 (337)
Q Consensus 281 g~i~iw~~~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~l~~~~ 327 (337)
+.|.+.|...++.........+. ...-..-.+.+||+|++..|+.++
T Consensus 201 ~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 201 SDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp SEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 89999998833311100000000 001123568999999888888776
No 248
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.82 E-value=1.4e-05 Score=65.50 Aligned_cols=225 Identities=8% Similarity=-0.006 Sum_probs=133.8
Q ss_pred CCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCC
Q 038533 71 YPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSID 148 (337)
Q Consensus 71 ~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d 148 (337)
.....++|.+++. ++++.. + .|..||.... ....+.. . .....+++.+ +++++++....
T Consensus 32 ~~pegia~~~~g~---------lyv~d~~~~~I~~~d~~g~---~~~~~~~-~-----~~p~gia~~~-dG~l~vad~~~ 92 (306)
T 2p4o_A 32 TFLENLASAPDGT---------IFVTNHEVGEIVSITPDGN---QQIHATV-E-----GKVSGLAFTS-NGDLVATGWNA 92 (306)
T ss_dssp CCEEEEEECTTSC---------EEEEETTTTEEEEECTTCC---EEEEEEC-S-----SEEEEEEECT-TSCEEEEEECT
T ss_pred CCcceEEECCCCC---------EEEEeCCCCeEEEECCCCc---eEEEEeC-C-----CCceeEEEcC-CCcEEEEeccC
Confidence 4567899999987 887764 4 9999987754 2222222 1 4678999998 88866665433
Q ss_pred C--cEEEEeCCCccchhhhh-ccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeee-------cCCCCCCCce
Q 038533 149 T--TCTIWDIEKGVVETQLI-AHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIY-------ESPQPDTPLL 217 (337)
Q Consensus 149 g--~i~v~d~~~~~~~~~~~-~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------~~~~~~~~i~ 217 (337)
. .|..+|..+++...... ........++.. .+..+++-..++.|..+|...++...... .....-....
T Consensus 93 ~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pn 172 (306)
T 2p4o_A 93 DSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAAN 172 (306)
T ss_dssp TSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEE
T ss_pred CcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCC
Confidence 2 47777777766322111 111223444444 34445555568899999986542111000 0001112334
Q ss_pred EEEeecCCCcEEEEEEecCCEEEEEECCCCCC--CeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCC
Q 038533 218 RLAWNKQDLRYMATILMDSNKVVILDIRSPTL--PVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAG 295 (337)
Q Consensus 218 ~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~ 295 (337)
.+ +| +++.|+++......|..||+...+. ....+.. ......+++.++|. ++++....+.|.+++.. .
T Consensus 173 gi--s~-dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~-l~va~~~~~~V~~~~~~--G--- 242 (306)
T 2p4o_A 173 GL--KR-FGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGN-LYGATHIYNSVVRIAPD--R--- 242 (306)
T ss_dssp EE--EE-ETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCC-EEEECBTTCCEEEECTT--C---
T ss_pred Cc--Cc-CCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCC-EEEEeCCCCeEEEECCC--C---
Confidence 45 77 7777777776655699999874221 1222221 13467899999997 77777777899999865 1
Q ss_pred CCCCCceee---eeCCCceeEEEEc---cCCCceEEEEc
Q 038533 296 PNGIDPMSM---YSAGSEINQLQWS---PAQPDWLAIAF 328 (337)
Q Consensus 296 ~~~~~~~~~---~~~~~~v~~~~~~---~~~~~l~~~~~ 328 (337)
. .... ........+++|. |++..|+.++.
T Consensus 243 ---~-~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 243 ---S-TTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp ---C-EEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred ---C-EEEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 1 1111 1123568999999 88777776654
No 249
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.80 E-value=3.1e-05 Score=63.86 Aligned_cols=220 Identities=8% Similarity=0.002 Sum_probs=128.5
Q ss_pred EEEEeCCeEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCc---cchh-hhhcc
Q 038533 93 LLASSGDFLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKG---VVET-QLIAH 168 (337)
Q Consensus 93 ~l~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~---~~~~-~~~~~ 168 (337)
+|++....|+..++.+.+. ...+..- ..+..++|++.++.++.+-..++.|..+++... .... .+...
T Consensus 4 ll~~~~~~I~~i~~~~~~~--~~~~~~~------~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~ 75 (316)
T 1ijq_A 4 LFFTNRHEVRKMTLDRSEY--TSLIPNL------RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD 75 (316)
T ss_dssp EEEECBSSEEEEETTSCCC--EEEECSC------SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSS
T ss_pred EEEECCCeEEEEECCCcce--EehhcCC------CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCC
Confidence 4444445899999988742 3333322 457799999834455566566789999998751 2111 12222
Q ss_pred CCceeEEEeC--CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecC-CEEEEEECC
Q 038533 169 DKEVYDICWG--EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS-NKVVILDIR 245 (337)
Q Consensus 169 ~~~v~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~-~~i~i~d~~ 245 (337)
......++++ .++++++-...+.|.++|+..... ..+... .......++++| .+..|+.+.... ..|..+++.
T Consensus 76 ~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~~~--~~~~P~~iavdp-~~g~ly~~d~~~~~~I~~~~~d 151 (316)
T 1ijq_A 76 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTLFRE--NGSKPRAIVVDP-VHGFMYWTDWGTPAKIKKGGLN 151 (316)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSE-EEEEEC--TTCCEEEEEEET-TTTEEEEEECSSSCEEEEEETT
T ss_pred CCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCce-EEEEEC--CCCCcceEEeCC-CCCEEEEEccCCCCeEEEEcCC
Confidence 2345778877 355556667788999999876543 222221 124668999998 555555544432 348888876
Q ss_pred CCCCCeEEee-cccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeee---CCCceeEEEEccCCC
Q 038533 246 SPTLPVAELE-RHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYS---AGSEINQLQWSPAQP 321 (337)
Q Consensus 246 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~ 321 (337)
. .....+. ..-...+.++++|++..+.++-+..+.|..+++. . .....+.. .......+++.. +
T Consensus 152 G--~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~d--g------~~~~~~~~~~~~~~~P~giav~~-~- 219 (316)
T 1ijq_A 152 G--VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN--G------GNRKTILEDEKRLAHPFSLAVFE-D- 219 (316)
T ss_dssp S--CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT--S------CSCEEEEECTTTTSSEEEEEEET-T-
T ss_pred C--CCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecC--C------CceEEEeecCCccCCcEEEEEEC-C-
Confidence 4 2233332 2234678999998877355565667899999987 2 11222221 123456777753 3
Q ss_pred ceEEEE-cCCcEEEEe
Q 038533 322 DWLAIA-FSNKMQLLK 336 (337)
Q Consensus 322 ~l~~~~-~d~~i~iw~ 336 (337)
.++.+. ..+.|..++
T Consensus 220 ~ly~~d~~~~~V~~~~ 235 (316)
T 1ijq_A 220 KVFWTDIINEAIFSAN 235 (316)
T ss_dssp EEEEEETTTTEEEEEE
T ss_pred EEEEEECCCCeEEEEe
Confidence 444444 455665543
No 250
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.79 E-value=2.4e-05 Score=61.77 Aligned_cols=197 Identities=8% Similarity=0.050 Sum_probs=127.7
Q ss_pred CCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhh-ccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCce
Q 038533 127 APLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLI-AHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEHST 204 (337)
Q Consensus 127 ~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~-~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~ 204 (337)
..+..++|+|..+.++++...++.|...|.. ++.++.+. ........+++. ++.++++.-.++.+.++++.......
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~ 105 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVK 105 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEE
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeee
Confidence 6799999998444566668889999999997 77666653 222467888888 56665666677889999887655311
Q ss_pred --eeec----CCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCC--CCCCeEEee-------cccceeeEEEeCCC
Q 038533 205 --IIYE----SPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRS--PTLPVAELE-------RHRACVNAIAWAPQ 269 (337)
Q Consensus 205 --~~~~----~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~--~~~~~~~~~-------~~~~~v~~~~~~~~ 269 (337)
.... ....+.....++|+| .++.|+++..... ..+|.+.. ....+..+. .+...+.+++++|.
T Consensus 106 ~~~~~~~~~~~~~~N~g~EGLA~d~-~~~~L~va~E~~p-~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~ 183 (255)
T 3qqz_A 106 ILKKIKIPLQESPTNCGFEGLAYSR-QDHTFWFFKEKNP-IEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQ 183 (255)
T ss_dssp EEEEEECCCSSCCCSSCCEEEEEET-TTTEEEEEEESSS-EEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETT
T ss_pred eeeeeccccccccccCCcceEEEeC-CCCEEEEEECcCC-ceEEEEcccccCCceeeecchhhccccccCCceeEEEcCC
Confidence 1111 112456679999999 6666666666655 44444431 111222221 12335789999998
Q ss_pred CCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeee-C---------CCceeEEEEccCCCceEEEEcCCcEEEEe
Q 038533 270 SRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYS-A---------GSEINQLQWSPAQPDWLAIAFSNKMQLLK 336 (337)
Q Consensus 270 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~-~---------~~~v~~~~~~~~~~~l~~~~~d~~i~iw~ 336 (337)
...+++.......+.++|.. . . +..... . -...-.|+|.++|+ |+.+++.+.+.+++
T Consensus 184 tg~lliLS~~s~~L~~~d~~--g------~-~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE~n~~y~f~ 250 (255)
T 3qqz_A 184 KNTLLVLSHESRALQEVTLV--G------E-VIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSEPNRFYRFT 250 (255)
T ss_dssp TTEEEEEETTTTEEEEECTT--C------C-EEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEETTTEEEEEE
T ss_pred CCeEEEEECCCCeEEEEcCC--C------C-EEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcCCceEEEEE
Confidence 77577777778888889877 2 1 221111 1 12568899999996 77778877766653
No 251
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.77 E-value=4.6e-05 Score=64.70 Aligned_cols=231 Identities=8% Similarity=-0.073 Sum_probs=135.8
Q ss_pred EEEEe-cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEE
Q 038533 26 AMAVC-GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLR 102 (337)
Q Consensus 26 ~~~~s-~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~ 102 (337)
|.+.. ..+|+.+. .+.|+..+++....... ......+..++|.+... .++.+-. . .|.
T Consensus 81 C~~~~~~~~l~~~~-----~~~I~~i~~~~~~~~~~------~~~~~~~~gl~~d~~~~--------~ly~~D~~~~~I~ 141 (386)
T 3v65_B 81 CKALGPEPVLLFAN-----RIDIRQVLPHRSEYTLL------LNNLENAIALDFHHRRE--------LVFWSDVTLDRIL 141 (386)
T ss_dssp EEECSSCCEEEEEC-----BSCEEEECTTSCCCEEE------ECSCSCEEEEEEETTTT--------EEEEEETTTTEEE
T ss_pred ECCccccceeEeec-----CccceeeccCCCcEEEE------ecCCCccEEEEEecCCC--------eEEEEeCCCCcEE
Confidence 33333 44555555 56666655443322222 12334578999997665 3555544 3 899
Q ss_pred EEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCceeEEEeC-CCc
Q 038533 103 LWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWG-EAR 181 (337)
Q Consensus 103 vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~ 181 (337)
.+++.... ....+.... .....+++.+..+.++++-...+.|.+.++........+.........++++ .+.
T Consensus 142 r~~~~g~~--~~~~~~~~~-----~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g 214 (386)
T 3v65_B 142 RANLNGSN--VEEVVSTGL-----ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEG 214 (386)
T ss_dssp EEETTSCC--EEEEECSSC-----SCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTT
T ss_pred EEecCCCC--cEEEEeCCC-----CCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCC
Confidence 99988763 222222211 3445788876455666666667889998886443222222233557889998 344
Q ss_pred -EEEEEcCC-CeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeecccc
Q 038533 182 -VFASVSAD-GSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRA 259 (337)
Q Consensus 182 -~l~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~ 259 (337)
++++-... +.|..+++.......... . .-.....++|+| ++..|+.+......|..+|+.. ......+.....
T Consensus 215 ~ly~td~~~~~~I~r~~~dG~~~~~~~~-~--~~~~PnGlavd~-~~~~lY~aD~~~~~I~~~d~dG-~~~~~~~~~~~~ 289 (386)
T 3v65_B 215 TIYWTDWGNTPRIEASSMDGSGRRIIAD-T--HLFWPNGLTIDY-AGRRMYWVDAKHHVIERANLDG-SHRKAVISQGLP 289 (386)
T ss_dssp EEEEEECSSSCEEEEEETTSCSCEEEEC-S--SCSCEEEEEEEG-GGTEEEEEETTTTEEEEECTTS-CSCEEEECSSCS
T ss_pred eEEEeccCCCCEEEEEeCCCCCcEEEEE-C--CCCCeeeEEEeC-CCCEEEEEECCCCEEEEEeCCC-CeeEEEEECCCC
Confidence 44444444 788888887654333322 1 124568899998 6666666665555699999864 222222332334
Q ss_pred eeeEEEeCCCCCCeEEEEcCCCcEEEEeCC
Q 038533 260 CVNAIAWAPQSRRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 260 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 289 (337)
....+++ ..+. ++++-...+.|..++..
T Consensus 290 ~P~giav-~~~~-ly~td~~~~~V~~~~~~ 317 (386)
T 3v65_B 290 HPFAITV-FEDS-LYWTDWHTKSINSANKF 317 (386)
T ss_dssp SEEEEEE-ETTE-EEEEETTTTEEEEEETT
T ss_pred CceEEEE-ECCE-EEEeeCCCCeEEEEECC
Confidence 5677777 3344 67777778888888854
No 252
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.77 E-value=3.9e-07 Score=83.19 Aligned_cols=274 Identities=7% Similarity=-0.032 Sum_probs=142.4
Q ss_pred cceEEEeeeeccC-----cceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C--eEE
Q 038533 31 GQRIAVGSFIEDY-----TNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D--FLR 102 (337)
Q Consensus 31 ~~~la~g~~~~~~-----d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~--~v~ 102 (337)
+++++.|+..... .+.-.+|.++..+........+...+.....++++..++. +++.|+ + .+.
T Consensus 198 g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~---------lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 198 GRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQ---------IVVTGGNDAKKTS 268 (656)
T ss_dssp TEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSC---------EEEECSSSTTCEE
T ss_pred CEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCC---------EEEeCCCCCCceE
Confidence 6777777742110 1222333344444443321122223444455678888898 888888 3 899
Q ss_pred EEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEee-CC-----CcEEEEeCCCccchhh--h--hccCCce
Q 038533 103 LWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCS-ID-----TTCTIWDIEKGVVETQ--L--IAHDKEV 172 (337)
Q Consensus 103 vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~d-----g~i~v~d~~~~~~~~~--~--~~~~~~v 172 (337)
+||..+.+......+.... . -.+++..+ ++++++.|+ .+ ..+.+||..+++-... . ......-
T Consensus 269 ~yd~~t~~W~~~~~~~~~R-----~-~~s~~~~~-dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~ 341 (656)
T 1k3i_A 269 LYDSSSDSWIPGPDMQVAR-----G-YQSSATMS-DGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTAD 341 (656)
T ss_dssp EEEGGGTEEEECCCCSSCC-----S-SCEEEECT-TSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCC
T ss_pred EecCcCCceeECCCCCccc-----c-ccceEEec-CCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccc
Confidence 9999887544443333221 1 12344445 788999998 34 5699999987652111 0 0000000
Q ss_pred eEEEeC-CCcEEEEEcCC---------CeEEEEECCCCCCceeeecCCC------CCCCceEEEeecCCCcEEEEEEecC
Q 038533 173 YDICWG-EARVFASVSAD---------GSVRIFDLRDKEHSTIIYESPQ------PDTPLLRLAWNKQDLRYMATILMDS 236 (337)
Q Consensus 173 ~~~~~~-~~~~l~~~~~d---------g~i~iwd~~~~~~~~~~~~~~~------~~~~i~~~~~~~~~~~~l~~~~~d~ 236 (337)
....+. ++..++.++.+ ..+..||..+............ ....-.++.|...++++++.|+.++
T Consensus 342 ~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~ 421 (656)
T 1k3i_A 342 KQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPD 421 (656)
T ss_dssp TTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSS
T ss_pred ccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCC
Confidence 011122 44555555444 3567888877653222211100 0112345555444778888887542
Q ss_pred -------C---EEEEEECCCCCCCeEEee---cccc-eeeEEEeCCCCCCeEEEEcCC-----------CcEEEEeCCCC
Q 038533 237 -------N---KVVILDIRSPTLPVAELE---RHRA-CVNAIAWAPQSRRHICSVGDD-----------SQAFIWELPLP 291 (337)
Q Consensus 237 -------~---~i~i~d~~~~~~~~~~~~---~~~~-~v~~~~~~~~~~~~l~~~~~d-----------g~i~iw~~~~~ 291 (337)
. .+.+||..+.. ..... .+.. .-.+.+..|+++ +++.|+.+ ..+.+||....
T Consensus 422 ~~~~~~~~~~~~v~~yd~~~~~--W~~~~~~~mp~~R~~~~~~~l~~g~-i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~ 498 (656)
T 1k3i_A 422 YQDSDATTNAHIITLGEPGTSP--NTVFASNGLYFARTFHTSVVLPDGS-TFITGGQRRGIPFEDSTPVFTPEIYVPEQD 498 (656)
T ss_dssp SSSSBCCCCEEEEECCSTTSCC--EEEECTTCCSSCCBSCEEEECTTSC-EEEECCBSBCCTTCCCSBCCCCEEEEGGGT
T ss_pred CCCCCcCCcceEEEcCCCCCCC--eeEEccCCCCCCcccCCeEECCCCC-EEEECCcccCcCcCCCCcccceEEEcCCCC
Confidence 0 37788876532 22221 1111 224456778898 88888754 46889998722
Q ss_pred CCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEc
Q 038533 292 PVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAF 328 (337)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 328 (337)
+... ...............+.|+++.+++++.
T Consensus 499 ~W~~-----~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 499 TFYK-----QNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp EEEE-----CCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred ceee-----cCCCCCccccccHhhcCCCcEEEecCCC
Confidence 2110 0000111122234556789987777774
No 253
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.77 E-value=4.1e-06 Score=65.88 Aligned_cols=193 Identities=11% Similarity=0.064 Sum_probs=119.2
Q ss_pred cceeeeeCCCc--eeEEEEe-cceEEEeeeeccCcc--eEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccC
Q 038533 13 ENSVTHESPYP--LYAMAVC-GQRIAVGSFIEDYTN--RVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKS 87 (337)
Q Consensus 13 ~~~~~~~~~~~--v~~~~~s-~~~la~g~~~~~~d~--~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~ 87 (337)
+.+.+++|+.. ...+.|+ +.++.+.+. +| .|+++|++........ .-..........+++.
T Consensus 32 ~vv~~~phd~~~ftqGL~~~~~~LyestG~----~g~S~v~~vD~~Tgkv~~~~------~l~~~~FgeGit~~g~---- 97 (262)
T 3nol_A 32 QIVHSYPHDTKAFTEGFFYRNGYFYESTGL----NGRSSIRKVDIESGKTLQQI------ELGKRYFGEGISDWKD---- 97 (262)
T ss_dssp EEEEEEECCTTCEEEEEEEETTEEEEEEEE----TTEEEEEEECTTTCCEEEEE------ECCTTCCEEEEEEETT----
T ss_pred EEEEEecCCCCcccceEEEECCEEEEECCC----CCCceEEEEECCCCcEEEEE------ecCCccceeEEEEeCC----
Confidence 45566777544 4778888 655555443 44 7888655544322221 1223444433333344
Q ss_pred cCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhh
Q 038533 88 SSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQL 165 (337)
Q Consensus 88 ~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~ 165 (337)
.+.+... + .+.+||..+. +.+.++.... .-..++ + +++.|+.+..++.|.++|..+.+.+..+
T Consensus 98 ----~ly~ltw~~~~v~v~D~~t~--~~~~ti~~~~------eG~glt--~-dg~~L~~SdGs~~i~~iDp~T~~v~~~I 162 (262)
T 3nol_A 98 ----KIVGLTWKNGLGFVWNIRNL--RQVRSFNYDG------EGWGLT--H-NDQYLIMSDGTPVLRFLDPESLTPVRTI 162 (262)
T ss_dssp ----EEEEEESSSSEEEEEETTTC--CEEEEEECSS------CCCCEE--E-CSSCEEECCSSSEEEEECTTTCSEEEEE
T ss_pred ----EEEEEEeeCCEEEEEECccC--cEEEEEECCC------CceEEe--c-CCCEEEEECCCCeEEEEcCCCCeEEEEE
Confidence 2444443 4 9999999998 5666665421 112344 3 5676777666788999999998877665
Q ss_pred hcc--C---CceeEEEeCCCcEEEEEcCCCeEEEEECCCCCCceeeecCC---------CCCCCceEEEeecCCCcEEEE
Q 038533 166 IAH--D---KEVYDICWGEARVFASVSADGSVRIFDLRDKEHSTIIYESP---------QPDTPLLRLAWNKQDLRYMAT 231 (337)
Q Consensus 166 ~~~--~---~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~---------~~~~~i~~~~~~~~~~~~l~~ 231 (337)
... . ..++.+.|.++..++..-.+..|.+.|.++++....+.... ......+.++|+| +++.|++
T Consensus 163 ~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp-~~~~lfV 241 (262)
T 3nol_A 163 TVTAHGEELPELNELEWVDGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDK-EHHRLFV 241 (262)
T ss_dssp ECEETTEECCCEEEEEEETTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEET-TTTEEEE
T ss_pred EeccCCccccccceeEEECCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcC-CCCEEEE
Confidence 532 1 33556788777777777678899999999998665554320 1124568999999 6666655
Q ss_pred EEec
Q 038533 232 ILMD 235 (337)
Q Consensus 232 ~~~d 235 (337)
.+..
T Consensus 242 TGK~ 245 (262)
T 3nol_A 242 TGKL 245 (262)
T ss_dssp EETT
T ss_pred ECCC
Confidence 5544
No 254
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.77 E-value=3.4e-06 Score=65.74 Aligned_cols=197 Identities=9% Similarity=-0.004 Sum_probs=120.6
Q ss_pred ccceeeeeCCC--ceeEEEEecceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcC
Q 038533 12 SENSVTHESPY--PLYAMAVCGQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSS 89 (337)
Q Consensus 12 ~~~~~~~~~~~--~v~~~~~s~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~ 89 (337)
.+.+..|+|+. -...+.|+++.|..++. ......|+.+|+......... .-..........+.+.
T Consensus 9 ~~v~~~~phd~~~ftqGL~~~~~~LyestG-~~g~S~v~~vD~~tgkv~~~~------~l~~~~fgeGi~~~~~------ 75 (243)
T 3mbr_X 9 YRVVKRYPHDTTAFTEGLFYLRGHLYESTG-ETGRSSVRKVDLETGRILQRA------EVPPPYFGAGIVAWRD------ 75 (243)
T ss_dssp EEEEEEEECCTTCCEEEEEEETTEEEEEEC-CTTSCEEEEEETTTCCEEEEE------ECCTTCCEEEEEEETT------
T ss_pred eEEEEEcCCCCccccccEEEECCEEEEECC-CCCCceEEEEECCCCCEEEEE------eCCCCcceeEEEEeCC------
Confidence 35566778854 35689999444444442 111358888776654433222 2222333332333333
Q ss_pred CccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhc
Q 038533 90 NRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIA 167 (337)
Q Consensus 90 ~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~ 167 (337)
.+.+... + .+.+||..+. +.+.++.... . -..+++ ++..|+.+..++.|.++|.++.+.+.++.-
T Consensus 76 --~ly~ltw~~~~v~v~D~~tl--~~~~ti~~~~-----~-Gwglt~---dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 76 --RLIQLTWRNHEGFVYDLATL--TPRARFRYPG-----E-GWALTS---DDSHLYMSDGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp --EEEEEESSSSEEEEEETTTT--EEEEEEECSS-----C-CCEEEE---CSSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred --EEEEEEeeCCEEEEEECCcC--cEEEEEeCCC-----C-ceEEee---CCCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence 2555444 4 9999999998 5666666432 2 234543 556666666788999999999887766653
Q ss_pred cC-----CceeEEEeCCCcEEEEEcCCCeEEEEECCCCCCceeeecC----------CCCCCCceEEEeecCCCcEEEEE
Q 038533 168 HD-----KEVYDICWGEARVFASVSADGSVRIFDLRDKEHSTIIYES----------PQPDTPLLRLAWNKQDLRYMATI 232 (337)
Q Consensus 168 ~~-----~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~----------~~~~~~i~~~~~~~~~~~~l~~~ 232 (337)
.. ..++.+.|.++..++..-.+..|.+.|.++++....+... .....-.+.++++| +++.|++.
T Consensus 143 ~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~-~~~~lfVT 221 (243)
T 3mbr_X 143 TAGGRPLDNLNELEWVNGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDA-EHDRLFVT 221 (243)
T ss_dssp EETTEECCCEEEEEEETTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEET-TTTEEEEE
T ss_pred ccCCcccccceeeEEeCCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcC-CCCEEEEE
Confidence 21 3456777777877777767889999999999866554322 01224568999999 55555554
Q ss_pred Eec
Q 038533 233 LMD 235 (337)
Q Consensus 233 ~~d 235 (337)
+..
T Consensus 222 GK~ 224 (243)
T 3mbr_X 222 GKR 224 (243)
T ss_dssp ETT
T ss_pred CCC
Confidence 433
No 255
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.75 E-value=3.3e-06 Score=66.39 Aligned_cols=187 Identities=13% Similarity=0.119 Sum_probs=119.2
Q ss_pred CeeEEEeecCCCCeEEEeeCCC--cEEEEeCCCccchhhhhccCCce--eEEEeCCCcEEEEEcCCCeEEEEECCCCCCc
Q 038533 128 PLTSFDWNEIEPKRIGTCSIDT--TCTIWDIEKGVVETQLIAHDKEV--YDICWGEARVFASVSADGSVRIFDLRDKEHS 203 (337)
Q Consensus 128 ~i~~~~~~~~~~~~l~~~~~dg--~i~v~d~~~~~~~~~~~~~~~~v--~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 203 (337)
-...+.|+ ++.++.+.+.+| .|+++|+++++.+..+.... .. ..++...+.+.+..-.++.+.+||..+.+..
T Consensus 44 ftqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~ 120 (262)
T 3nol_A 44 FTEGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQV 120 (262)
T ss_dssp EEEEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEE
T ss_pred ccceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEE
Confidence 35678887 467777777766 89999999999877765332 33 2355544555556667899999999999877
Q ss_pred eeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeecc--c---ceeeEEEeCCCCCCeEEEEc
Q 038533 204 TIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERH--R---ACVNAIAWAPQSRRHICSVG 278 (337)
Q Consensus 204 ~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~--~---~~v~~~~~~~~~~~~l~~~~ 278 (337)
..+... ..-..++ + ++..|+.+..++. |.++|..+ .+.+..+... . ..++.+.|. +|. +.+..-
T Consensus 121 ~ti~~~----~eG~glt--~-dg~~L~~SdGs~~-i~~iDp~T-~~v~~~I~V~~~g~~~~~lNELe~~-~G~-lyan~w 189 (262)
T 3nol_A 121 RSFNYD----GEGWGLT--H-NDQYLIMSDGTPV-LRFLDPES-LTPVRTITVTAHGEELPELNELEWV-DGE-IFANVW 189 (262)
T ss_dssp EEEECS----SCCCCEE--E-CSSCEEECCSSSE-EEEECTTT-CSEEEEEECEETTEECCCEEEEEEE-TTE-EEEEET
T ss_pred EEEECC----CCceEEe--c-CCCEEEEECCCCe-EEEEcCCC-CeEEEEEEeccCCccccccceeEEE-CCE-EEEEEc
Confidence 666543 1223444 3 6677777665555 99999988 4455555432 1 234457776 666 666666
Q ss_pred CCCcEEEEeCCCCCCCCCCC---CCcee--eeeCCCceeEEEEccCCCceEEEEc
Q 038533 279 DDSQAFIWELPLPPVAGPNG---IDPMS--MYSAGSEINQLQWSPAQPDWLAIAF 328 (337)
Q Consensus 279 ~dg~i~iw~~~~~~~~~~~~---~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~ 328 (337)
.++.|.+.|...++...... ..+.. ...-..-.+.+||+|+++.|+.++-
T Consensus 190 ~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 190 QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 78889999988433211000 00000 0011235689999999888887773
No 256
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.73 E-value=3e-06 Score=66.64 Aligned_cols=187 Identities=11% Similarity=0.008 Sum_probs=117.7
Q ss_pred ceeeeeCCCc--eeEEEEe-cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeE--EEecCCCCcccCc
Q 038533 14 NSVTHESPYP--LYAMAVC-GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTK--LMFDPNSSSRKSS 88 (337)
Q Consensus 14 ~~~~~~~~~~--v~~~~~s-~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~--i~~~~~~~~~~~~ 88 (337)
.+..+.|+.. ...+.|+ +.++.+.+. +|.|+++|++.. +... . . -...... +.+. +.
T Consensus 45 Vv~~~phd~~~ftqGL~~~~~~Ly~stG~----~g~v~~iD~~Tg--kv~~--~--~-l~~~~FgeGit~~--g~----- 106 (268)
T 3nok_A 45 IIREYPHATNAFTQGLVFHQGHFFESTGH----QGTLRQLSLESA--QPVW--M--E-RLGNIFAEGLASD--GE----- 106 (268)
T ss_dssp EEEEEECCTTCCEEEEEEETTEEEEEETT----TTEEEECCSSCS--SCSE--E--E-ECTTCCEEEEEEC--SS-----
T ss_pred EEEEEcCCCccccceEEEECCEEEEEcCC----CCEEEEEECCCC--cEEe--E--E-CCCCcceeEEEEe--CC-----
Confidence 4556777543 4688888 544444443 778888665543 3332 1 1 1223333 5554 33
Q ss_pred CCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhh
Q 038533 89 SNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLI 166 (337)
Q Consensus 89 ~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~ 166 (337)
.+.+... + .+.+||..+. +.+.++.... .-..+++ +++.|+.+..++.|.++|.++.+.+..+.
T Consensus 107 ---~Ly~ltw~~~~v~V~D~~Tl--~~~~ti~~~~------eGwGLt~---Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~ 172 (268)
T 3nok_A 107 ---RLYQLTWTEGLLFTWSGMPP--QRERTTRYSG------EGWGLCY---WNGKLVRSDGGTMLTFHEPDGFALVGAVQ 172 (268)
T ss_dssp ---CEEEEESSSCEEEEEETTTT--EEEEEEECSS------CCCCEEE---ETTEEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred ---EEEEEEccCCEEEEEECCcC--cEEEEEeCCC------ceeEEec---CCCEEEEECCCCEEEEEcCCCCeEEEEEE
Confidence 2555443 4 9999999998 5666666422 2234554 56667766678999999999988776665
Q ss_pred c--cC---CceeEEEeCCCcEEEEEcCCCeEEEEECCCCCCceeeecC----------CCCCCCceEEEeecCCCcEEEE
Q 038533 167 A--HD---KEVYDICWGEARVFASVSADGSVRIFDLRDKEHSTIIYES----------PQPDTPLLRLAWNKQDLRYMAT 231 (337)
Q Consensus 167 ~--~~---~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~----------~~~~~~i~~~~~~~~~~~~l~~ 231 (337)
- +. ..++.+.|.++.+++..-.+..|.+.|.++++....+... .....-.+.++++|...+++++
T Consensus 173 V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVT 252 (268)
T 3nok_A 173 VKLRGQPVELINELECANGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMT 252 (268)
T ss_dssp CEETTEECCCEEEEEEETTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEE
T ss_pred eCCCCcccccccccEEeCCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEe
Confidence 2 11 2456778887877777767889999999999865554321 1123467899999944455554
Q ss_pred E
Q 038533 232 I 232 (337)
Q Consensus 232 ~ 232 (337)
|
T Consensus 253 G 253 (268)
T 3nok_A 253 G 253 (268)
T ss_dssp E
T ss_pred C
Confidence 3
No 257
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.72 E-value=7.4e-05 Score=62.46 Aligned_cols=234 Identities=8% Similarity=-0.067 Sum_probs=137.7
Q ss_pred ceeEEEEe-cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-
Q 038533 23 PLYAMAVC-GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D- 99 (337)
Q Consensus 23 ~v~~~~~s-~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~- 99 (337)
...|.+.. ..+|+.+. .+.|+..+++.. .... . ......+..++|.+... .++.+-. .
T Consensus 35 ~~~C~~~~~~~~ll~~~-----~~~I~~i~~~g~--~~~~--~--~~~~~~~~~l~~d~~~~--------~ly~~D~~~~ 95 (349)
T 3v64_C 35 RRSCKALGPEPVLLFAN-----RIDIRQVLPHRS--EYTL--L--LNNLENAIALDFHHRRE--------LVFWSDVTLD 95 (349)
T ss_dssp SSCEEESSSCCEEEEEC-----BSCEEEECTTSC--CEEE--E--ECSCSCEEEEEEETTTT--------EEEEEETTTT
T ss_pred CCcccccccCceeEeec-----ccceEEEeCCCC--eeEE--e--ecCCCceEEEEEecccc--------EEEEEeccCC
Confidence 34555554 45566655 556666444433 2222 1 12234478999997665 3555544 3
Q ss_pred eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCceeEEEeCC
Q 038533 100 FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGE 179 (337)
Q Consensus 100 ~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~ 179 (337)
.|..+++..... ...+.... .....+++.+..++++++-...+.|.+.++........+.........+++++
T Consensus 96 ~I~r~~~~g~~~--~~~~~~~~-----~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp 168 (349)
T 3v64_C 96 RILRANLNGSNV--EEVVSTGL-----ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHP 168 (349)
T ss_dssp EEEEEETTSCSC--EEEECSSC-----SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEET
T ss_pred ceEEEecCCCCc--eEEEeCCC-----CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEec
Confidence 899999887632 22222211 34567888864556666666778999999865432222222334578899983
Q ss_pred --CcEEEEEcCC-CeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeec
Q 038533 180 --ARVFASVSAD-GSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELER 256 (337)
Q Consensus 180 --~~~l~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~ 256 (337)
+.++++-... +.|..+++......... .. .-.....++++| ++..|+.+......|..+|+.. ......+..
T Consensus 169 ~~g~ly~td~~~~~~I~r~~~dG~~~~~~~-~~--~~~~PnGla~d~-~~~~lY~aD~~~~~I~~~~~dG-~~~~~~~~~ 243 (349)
T 3v64_C 169 MEGTIYWTDWGNTPRIEASSMDGSGRRIIA-DT--HLFWPNGLTIDY-AGRRMYWVDAKHHVIERANLDG-SHRKAVISQ 243 (349)
T ss_dssp TTTEEEEEECSSSCEEEEEETTSCSCEESC-CS--SCSCEEEEEEET-TTTEEEEEETTTTEEEEEETTS-CSCEEEECS
T ss_pred CcCeEEEeccCCCCEEEEEeCCCCCcEEEE-EC--CCCCcceEEEeC-CCCEEEEEECCCCEEEEEeCCC-CceEEEEeC
Confidence 4444554445 78998988765432222 11 124568899998 6666666665555699999875 222222322
Q ss_pred ccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCC
Q 038533 257 HRACVNAIAWAPQSRRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 257 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 289 (337)
.......+++. .+. ++++-...+.|..++..
T Consensus 244 ~~~~P~giav~-~~~-ly~td~~~~~V~~~~~~ 274 (349)
T 3v64_C 244 GLPHPFAITVF-EDS-LYWTDWHTKSINSANKF 274 (349)
T ss_dssp SCSSEEEEEEE-TTE-EEEEETTTTEEEEEETT
T ss_pred CCCCceEEEEE-CCE-EEEecCCCCeEEEEEcc
Confidence 33455677773 344 66676677888888754
No 258
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.70 E-value=3.9e-06 Score=65.38 Aligned_cols=185 Identities=14% Similarity=0.117 Sum_probs=117.0
Q ss_pred CCCCeEEEecCCCCcccCcCCccEEEEeCC----eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEe
Q 038533 70 PYPPTKLMFDPNSSSRKSSSNRHLLASSGD----FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTC 145 (337)
Q Consensus 70 ~~~i~~i~~~~~~~~~~~~~~~~~l~~~~~----~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 145 (337)
..-...+.|++ +. ++.+.+. .|+.+|+.+++ .+..+.... . .---.++.. .+.+.+..
T Consensus 20 ~~ftqGL~~~~-~~---------LyestG~~g~S~v~~vD~~tgk--v~~~~~l~~-~---~fgeGi~~~--~~~ly~lt 81 (243)
T 3mbr_X 20 TAFTEGLFYLR-GH---------LYESTGETGRSSVRKVDLETGR--ILQRAEVPP-P---YFGAGIVAW--RDRLIQLT 81 (243)
T ss_dssp TCCEEEEEEET-TE---------EEEEECCTTSCEEEEEETTTCC--EEEEEECCT-T---CCEEEEEEE--TTEEEEEE
T ss_pred ccccccEEEEC-CE---------EEEECCCCCCceEEEEECCCCC--EEEEEeCCC-C---cceeEEEEe--CCEEEEEE
Confidence 34456899987 44 6666552 89999999995 444443321 0 111234443 45566666
Q ss_pred eCCCcEEEEeCCCccchhhhhccCCceeEEEeCCCcEEEEEcCCCeEEEEECCCCCCceeeecCCC--CCCCceEEEeec
Q 038533 146 SIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQ--PDTPLLRLAWNK 223 (337)
Q Consensus 146 ~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~i~~~~~~~ 223 (337)
..++.+.++|.++.+.+.++... ..-..++. +++.|+.+..++.|.++|..+.+....+..... .-..++.+.|.
T Consensus 82 w~~~~v~v~D~~tl~~~~ti~~~-~~Gwglt~-dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~- 158 (243)
T 3mbr_X 82 WRNHEGFVYDLATLTPRARFRYP-GEGWALTS-DDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV- 158 (243)
T ss_dssp SSSSEEEEEETTTTEEEEEEECS-SCCCEEEE-CSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-
T ss_pred eeCCEEEEEECCcCcEEEEEeCC-CCceEEee-CCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-
Confidence 78899999999999988887743 33355655 455566666689999999999886555433210 11345667765
Q ss_pred CCCcEEEEEEecCCEEEEEECCCCCCCeEEeecc-------------cceeeEEEeCCCCCCeEEEEc
Q 038533 224 QDLRYMATILMDSNKVVILDIRSPTLPVAELERH-------------RACVNAIAWAPQSRRHICSVG 278 (337)
Q Consensus 224 ~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~~l~~~~ 278 (337)
++..++..-.+.. |.+.|.++ ++.+..+... ..-.+.|+++|+++.+++||-
T Consensus 159 -~G~lyanvw~s~~-I~vIDp~t-G~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 159 -NGELLANVWLTSR-IARIDPAS-GKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp -TTEEEEEETTTTE-EEEECTTT-CBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred -CCEEEEEECCCCe-EEEEECCC-CCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 5554443333444 99999998 5555554311 135688999998884555654
No 259
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.67 E-value=0.00013 Score=62.25 Aligned_cols=183 Identities=10% Similarity=0.035 Sum_probs=113.4
Q ss_pred cEEEEeCCeEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCcc----chhhhhc
Q 038533 92 HLLASSGDFLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGV----VETQLIA 167 (337)
Q Consensus 92 ~~l~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~----~~~~~~~ 167 (337)
.++.+....|+..++..... ...+... ..+..++|++.++.++.+-...+.|+.+++.... ....+..
T Consensus 85 ~ll~~~~~~I~~i~l~~~~~--~~~~~~~------~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~ 156 (400)
T 3p5b_L 85 YLFFTNRHEVRKMTLDRSEY--TSLIPNL------RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR 156 (400)
T ss_dssp EEEEEETTEEEEECTTSCSC--EEEECSC------SCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECS
T ss_pred eeEEeccceeEEEccCCcce--eEecccc------CcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeC
Confidence 34444445999999987743 2223322 5678999998445555555567889999986522 1222222
Q ss_pred cCCceeEEEeC--CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEe--cCCEEEEEE
Q 038533 168 HDKEVYDICWG--EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILM--DSNKVVILD 243 (337)
Q Consensus 168 ~~~~v~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~--d~~~i~i~d 243 (337)
.......++++ .++++++-...+.|.+.++........+.. .-.....++++| .+..|+.... .+. |...+
T Consensus 157 ~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~---~~~~P~~iavdp-~~g~ly~td~~~~~~-I~~~~ 231 (400)
T 3p5b_L 157 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE---NGSKPRAIVVDP-VHGFMYWTDWGTPAK-IKKGG 231 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEEC---SSCCEEEEEEET-TTTEEEEEECSSSCC-EEEEE
T ss_pred CCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeC---CCCCcceEEEec-ccCeEEEEeCCCCCE-EEEEe
Confidence 33456777877 466666767788999999886653333321 224578999999 5555555442 245 88888
Q ss_pred CCCCCCCeEEe-ecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCC
Q 038533 244 IRSPTLPVAEL-ERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 244 ~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 289 (337)
+.. . ....+ ...-...+.|+++|++..+.++=...+.|..++++
T Consensus 232 ~dG-~-~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~d 276 (400)
T 3p5b_L 232 LNG-V-DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 276 (400)
T ss_dssp TTS-C-SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCC-C-ccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCC
Confidence 864 2 22333 32335678999998877344555567789999987
No 260
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.65 E-value=0.00011 Score=68.49 Aligned_cols=282 Identities=11% Similarity=0.032 Sum_probs=158.5
Q ss_pred CceeEEEEe-cceEEEeeeeccCcceEEEEEecCCCcceecC--------C-CcCCCCCCCCeEEEecCCCCcccCcCCc
Q 038533 22 YPLYAMAVC-GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTH--------P-SLSFDHPYPPTKLMFDPNSSSRKSSSNR 91 (337)
Q Consensus 22 ~~v~~~~~s-~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~--------~-~~~~~~~~~i~~i~~~~~~~~~~~~~~~ 91 (337)
..|+++... ...|.+|+. .+.|.+++........... . ....-....|.++...+++.
T Consensus 258 ~~i~~i~~d~~g~lWigt~----~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-------- 325 (781)
T 3v9f_A 258 SYIFSIKQLKDNKLWIATE----LNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-------- 325 (781)
T ss_dssp CCEEEEEECTTSEEEEEES----SSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC--------
T ss_pred ceEEEEEECCCCCEEEEeC----CCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC--------
Confidence 468888887 667777773 4777776654332111110 0 00011345688998888887
Q ss_pred cEEEEeCC-eEEEEecCCCCccceeeecC--CCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhh---
Q 038533 92 HLLASSGD-FLRLWDVGDSSIEPVAVLNN--SKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQL--- 165 (337)
Q Consensus 92 ~~l~~~~~-~v~vw~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~--- 165 (337)
+-+...+ -|..++..+........... .........|.++...+ ++. |-.|+.++-|..+|..+++.....
T Consensus 326 -lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~ 402 (781)
T 3v9f_A 326 -IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDG-QGK-LWIGTDGGGINVFENGKRVAIYNKENR 402 (781)
T ss_dssp -EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECT-TSC-EEEEEBSSCEEEEETTEEEEECC----
T ss_pred -EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcC-CCC-EEEEeCCCcEEEEECCCCeEEEccCCC
Confidence 6555534 88888887663222111000 00001125688888865 555 555666667889998765432211
Q ss_pred hccCCceeEEEeCCCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECC
Q 038533 166 IAHDKEVYDICWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIR 245 (337)
Q Consensus 166 ~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~ 245 (337)
......|.++...+...|..|+.++.|..+|..+++....... ......|.++...+ ++. |..++. ++ |..||..
T Consensus 403 ~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~-~~~~~~v~~i~~d~-~g~-lwigt~-~G-l~~~~~~ 477 (781)
T 3v9f_A 403 ELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELE-KNELLDVRVFYEDK-NKK-IWIGTH-AG-VFVIDLA 477 (781)
T ss_dssp -CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCST-TTCCCCEEEEEECT-TSE-EEEEET-TE-EEEEESS
T ss_pred CCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccC-CCCCCeEEEEEECC-CCC-EEEEEC-Cc-eEEEeCC
Confidence 1234568888887444556677777899999876643221111 12346788888876 555 444554 55 9999987
Q ss_pred CCCCCeEEeecc-----cceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeee----eCCCceeEEEE
Q 038533 246 SPTLPVAELERH-----RACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMY----SAGSEINQLQW 316 (337)
Q Consensus 246 ~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~ 316 (337)
+. ......... ...|.++...++|. |..|+.++-+..|+..... ...+. -....|.++..
T Consensus 478 ~~-~~~~~~~~~~~~~~~~~i~~i~~d~~g~--lWigt~~~Gl~~~~~~~~~--------~~~~~~~~~l~~~~i~~i~~ 546 (781)
T 3v9f_A 478 SK-KVIHHYDTSNSQLLENFVRSIAQDSEGR--FWIGTFGGGVGIYTPDMQL--------VRKFNQYEGFCSNTINQIYR 546 (781)
T ss_dssp SS-SCCEEECTTTSSCSCSCEEEEEECTTCC--EEEEESSSCEEEECTTCCE--------EEEECTTTTCSCSCEEEEEE
T ss_pred CC-eEEecccCcccccccceeEEEEEcCCCC--EEEEEcCCCEEEEeCCCCe--------EEEccCCCCCCCCeeEEEEE
Confidence 63 222211111 35788999998887 4445554447778776211 11111 12356889998
Q ss_pred ccCCCceEEEEcCCcEEEE
Q 038533 317 SPAQPDWLAIAFSNKMQLL 335 (337)
Q Consensus 317 ~~~~~~l~~~~~d~~i~iw 335 (337)
.++|..++++ .+|.+..|
T Consensus 547 d~~g~lWi~T-~~Glv~~~ 564 (781)
T 3v9f_A 547 SSKGQMWLAT-GEGLVCFP 564 (781)
T ss_dssp CTTSCEEEEE-TTEEEEES
T ss_pred CCCCCEEEEE-CCCceEEE
Confidence 8888654443 35543444
No 261
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.63 E-value=8.9e-05 Score=61.06 Aligned_cols=222 Identities=8% Similarity=-0.024 Sum_probs=129.0
Q ss_pred EEEEeCCeEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchh-hhhccCCc
Q 038533 93 LLASSGDFLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVET-QLIAHDKE 171 (337)
Q Consensus 93 ~l~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~-~~~~~~~~ 171 (337)
+|.+....|+..++..........+.+- .....++|++.++.++.+-...+.|..+++..+.... .+...-..
T Consensus 7 ll~~~~~~I~~i~l~~~~~~~~~~~~~~------~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~ 80 (318)
T 3sov_A 7 LLYANRRDLRLVDATNGKENATIVVGGL------EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLS 80 (318)
T ss_dssp EEEECEEEEEEEETTCTTSCCEEEEEEE------EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSC
T ss_pred EEEEccCeEEEEECCCCceEEEEEecCC------CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCC
Confidence 4444434999999987631222222221 3466899998445566666677889999987653221 12222234
Q ss_pred eeEEEeC--CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEe-cCCEEEEEECCCCC
Q 038533 172 VYDICWG--EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILM-DSNKVVILDIRSPT 248 (337)
Q Consensus 172 v~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-d~~~i~i~d~~~~~ 248 (337)
...+++. .++++++-...+.|.++++...... .+... .......++++| .+..|+.... ....|..+++..
T Consensus 81 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~-~l~~~--~~~~P~giavdp-~~g~ly~td~~~~~~I~r~~~dG-- 154 (318)
T 3sov_A 81 PDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK-VLFWQ--ELDQPRAIALDP-SSGFMYWTDWGEVPKIERAGMDG-- 154 (318)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEECS--SCSSEEEEEEEG-GGTEEEEEECSSSCEEEEEETTS--
T ss_pred ccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEE-EEEeC--CCCCccEEEEeC-CCCEEEEEecCCCCEEEEEEcCC--
Confidence 5677776 4566667677889999998765432 22221 234568999998 5555555543 223488888764
Q ss_pred CCeEEe-ecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeee-eCCCceeEEEEccCCCceEEE
Q 038533 249 LPVAEL-ERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMY-SAGSEINQLQWSPAQPDWLAI 326 (337)
Q Consensus 249 ~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~ 326 (337)
.....+ ...-...+.++++|++..+.++=+..+.|..++++ . .....+. ........+++..+ .++.+
T Consensus 155 ~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~d--G------~~~~~~~~~~~~~P~glav~~~--~lywt 224 (318)
T 3sov_A 155 SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD--G------TNRQAVVKGSLPHPFALTLFED--ILYWT 224 (318)
T ss_dssp CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT--S------CSCEEEECSCCSCEEEEEEETT--EEEEE
T ss_pred CCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCC--C------CceEEEecCCCCCceEEEEeCC--EEEEE
Confidence 222333 22234568999999776355565667889999987 2 1122222 23344566776533 34433
Q ss_pred E-cCCcEEEEe
Q 038533 327 A-FSNKMQLLK 336 (337)
Q Consensus 327 ~-~d~~i~iw~ 336 (337)
. ..+.|..++
T Consensus 225 d~~~~~V~~~~ 235 (318)
T 3sov_A 225 DWSTHSILACN 235 (318)
T ss_dssp ETTTTEEEEEE
T ss_pred ecCCCeEEEEE
Confidence 3 345555443
No 262
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.63 E-value=0.0001 Score=68.77 Aligned_cols=280 Identities=8% Similarity=-0.023 Sum_probs=156.0
Q ss_pred CceeEEEEe-cceEEEeeeeccCcceEEEEEecCCCcceecCCCcC----CCCCCCCeEEEecCCCCcccCcCCccEEEE
Q 038533 22 YPLYAMAVC-GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLS----FDHPYPPTKLMFDPNSSSRKSSSNRHLLAS 96 (337)
Q Consensus 22 ~~v~~~~~s-~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~----~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~ 96 (337)
..|.++... ...|.+|+ .+.+.+|+.. +..+....... .-....|.++...+++. +.+.
T Consensus 211 ~~i~~i~~d~~g~lwigt-----~~Gl~~~d~~--~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~---------lWig 274 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWIGT-----SKGLALFNAN--TETFTNFHNNPGNIHGALSSYIFSIKQLKDNK---------LWIA 274 (781)
T ss_dssp SSEEEEEECTTCCEEEEE-----TTEEEEEETT--TTEEEC-----------CCCCEEEEEECTTSE---------EEEE
T ss_pred CceeEEEEcCCCCEEEEe-----CCcHheECCC--CCcEEEEEcCCCccccccCceEEEEEECCCCC---------EEEE
Confidence 457788777 55666777 3357776543 33333210000 11245688998888887 6665
Q ss_pred eC-CeEEEEecCCCCccceee-------ecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhh---
Q 038533 97 SG-DFLRLWDVGDSSIEPVAV-------LNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQL--- 165 (337)
Q Consensus 97 ~~-~~v~vw~~~~~~~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~--- 165 (337)
.. +-|.+++..+........ .......-....|.++...+ ++. |-.|+.++-|..++..+.......
T Consensus 275 t~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~-~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~ 352 (781)
T 3v9f_A 275 TELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDS-FNN-IWIGTWGGGINFISNAPPTFHTWSYSP 352 (781)
T ss_dssp ESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECS-SCC-EEEEEBSSCEEEECSSCCSCEEEC---
T ss_pred eCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeC-CCC-EEEEecCCeEEEeCCCCCcceeeccCc
Confidence 55 488889988764322211 00000011125788988876 555 555666777888987655421110
Q ss_pred ------hccCCceeEEEeCCCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEE
Q 038533 166 ------IAHDKEVYDICWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKV 239 (337)
Q Consensus 166 ------~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i 239 (337)
......|.++...+...|..|+.++.|..||..+................|.++...+ ++. |.+|+.+++ |
T Consensus 353 ~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~-lWigt~~~G-l 429 (781)
T 3v9f_A 353 TQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDS-EGN-LWFGTYLGN-I 429 (781)
T ss_dssp -CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECT-TSC-EEEEETTEE-E
T ss_pred cccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECC-CCC-EEEEeccCC-E
Confidence 1123568888888444566777667788999865432111110112335688888765 554 444666566 9
Q ss_pred EEEECCCCCCCeEEee---cccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeee-----eCCCce
Q 038533 240 VILDIRSPTLPVAELE---RHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMY-----SAGSEI 311 (337)
Q Consensus 240 ~i~d~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~-----~~~~~v 311 (337)
..+|.++ ++ ...+. .....|.++...+++. |..|+. +.|..++....... .... .....|
T Consensus 430 ~~~~~~~-~~-~~~~~~~~~~~~~v~~i~~d~~g~--lwigt~-~Gl~~~~~~~~~~~-------~~~~~~~~~~~~~~i 497 (781)
T 3v9f_A 430 SYYNTRL-KK-FQIIELEKNELLDVRVFYEDKNKK--IWIGTH-AGVFVIDLASKKVI-------HHYDTSNSQLLENFV 497 (781)
T ss_dssp EEECSSS-CE-EEECCSTTTCCCCEEEEEECTTSE--EEEEET-TEEEEEESSSSSCC-------EEECTTTSSCSCSCE
T ss_pred EEEcCCC-Cc-EEEeccCCCCCCeEEEEEECCCCC--EEEEEC-CceEEEeCCCCeEE-------ecccCccccccccee
Confidence 9999875 22 23332 1245788998888876 444554 56888887722211 0100 113578
Q ss_pred eEEEEccCCCceEEEEcCCcEEEE
Q 038533 312 NQLQWSPAQPDWLAIAFSNKMQLL 335 (337)
Q Consensus 312 ~~~~~~~~~~~l~~~~~d~~i~iw 335 (337)
.++...++|..++++..+| |..+
T Consensus 498 ~~i~~d~~g~lWigt~~~G-l~~~ 520 (781)
T 3v9f_A 498 RSIAQDSEGRFWIGTFGGG-VGIY 520 (781)
T ss_dssp EEEEECTTCCEEEEESSSC-EEEE
T ss_pred EEEEEcCCCCEEEEEcCCC-EEEE
Confidence 9999999886444443344 4444
No 263
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.61 E-value=7e-05 Score=61.36 Aligned_cols=231 Identities=12% Similarity=0.051 Sum_probs=129.2
Q ss_pred ccceeeeeCCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcC
Q 038533 12 SENSVTHESPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSS 89 (337)
Q Consensus 12 ~~~~~~~~~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~ 89 (337)
.+.+..+........++|+ ++++++-.. ++.|..|+.+ ...... ......+..+++.+++.
T Consensus 22 ~~~~~~~p~~~~pegia~~~~g~lyv~d~~----~~~I~~~d~~--g~~~~~-----~~~~~~p~gia~~~dG~------ 84 (306)
T 2p4o_A 22 AKIITSFPVNTFLENLASAPDGTIFVTNHE----VGEIVSITPD--GNQQIH-----ATVEGKVSGLAFTSNGD------ 84 (306)
T ss_dssp EEEEEEECTTCCEEEEEECTTSCEEEEETT----TTEEEEECTT--CCEEEE-----EECSSEEEEEEECTTSC------
T ss_pred ceEeEeCCCCCCcceEEECCCCCEEEEeCC----CCeEEEECCC--CceEEE-----EeCCCCceeEEEcCCCc------
Confidence 3445556555678899998 555444433 7777775543 322221 12234688999999998
Q ss_pred CccEEEEeC--Ce--EEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCcc-chh-
Q 038533 90 NRHLLASSG--DF--LRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGV-VET- 163 (337)
Q Consensus 90 ~~~~l~~~~--~~--v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~-~~~- 163 (337)
++++.. +. |..++..+++...+..+... .....++..+ .+..+++-..++.|..+|..+++ .+.
T Consensus 85 ---l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~------~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~~~~~v~~ 154 (306)
T 2p4o_A 85 ---LVATGWNADSIPVVSLVKSDGTVETLLTLPDA------IFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPSGSIWL 154 (306)
T ss_dssp ---EEEEEECTTSCEEEEEECTTSCEEEEEECTTC------SCEEEEEESS-SSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ---EEEEeccCCcceEEEEcCCCCeEEEEEeCCCc------cccCcccccC-CCcEEEEECCCCeEEEEeCCCCcEeEEE
Confidence 766653 23 66667777754333322211 2233444443 44445554468899999986542 110
Q ss_pred --------hhhccCCceeEEEeC-CCc-EEEEEcCCCeEEEEECCC-CCC--ceeeecCCCCCCCceEEEeecCCCcEEE
Q 038533 164 --------QLIAHDKEVYDICWG-EAR-VFASVSADGSVRIFDLRD-KEH--STIIYESPQPDTPLLRLAWNKQDLRYMA 230 (337)
Q Consensus 164 --------~~~~~~~~v~~~~~~-~~~-~l~~~~~dg~i~iwd~~~-~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 230 (337)
.....-...+.+ + +++ ++++-...+.|..+|+.. ++. ...+... .....+++++ ++++++
T Consensus 155 ~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~----~~P~gi~vd~-dG~l~v 227 (306)
T 2p4o_A 155 EHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ----TNIDDFAFDV-EGNLYG 227 (306)
T ss_dssp ECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES----CCCSSEEEBT-TCCEEE
T ss_pred ECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc----CCCCCeEECC-CCCEEE
Confidence 001111234455 4 454 555666678999999875 221 1111111 3456788888 887655
Q ss_pred EEEecCCEEEEEECCCCCCCeE--EeecccceeeEEEeC---CCCCCeEEEEcCC
Q 038533 231 TILMDSNKVVILDIRSPTLPVA--ELERHRACVNAIAWA---PQSRRHICSVGDD 280 (337)
Q Consensus 231 ~~~~d~~~i~i~d~~~~~~~~~--~~~~~~~~v~~~~~~---~~~~~~l~~~~~d 280 (337)
+....+. |.++|.. ++... .+.......++++|. |++. .|+.++..
T Consensus 228 a~~~~~~-V~~~~~~--G~~~~~~~~~~~~~~p~~~a~~g~~~d~~-~LyVt~~~ 278 (306)
T 2p4o_A 228 ATHIYNS-VVRIAPD--RSTTIIAQAEQGVIGSTAVAFGQTEGDCT-AIYVVTNG 278 (306)
T ss_dssp ECBTTCC-EEEECTT--CCEEEEECGGGTCTTEEEEEECCSTTTTT-EEEEEECT
T ss_pred EeCCCCe-EEEECCC--CCEEEEeecccccCCceEEEEecccCCCC-EEEEECCC
Confidence 5544555 9999875 33221 222223457899998 8877 45444433
No 264
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.53 E-value=1.5e-05 Score=65.89 Aligned_cols=189 Identities=10% Similarity=0.036 Sum_probs=111.9
Q ss_pred CeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhh--------------------ccCCceeEEEeCC-CcEEEEE
Q 038533 128 PLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLI--------------------AHDKEVYDICWGE-ARVFASV 186 (337)
Q Consensus 128 ~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~--------------------~~~~~v~~~~~~~-~~~l~~~ 186 (337)
...+++|.+ +++++.++..++.|..||..+++.. .+. .....+..+++.+ +..|+.+
T Consensus 20 ~p~~i~~d~-~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 97 (322)
T 2fp8_A 20 APNSFTFDS-TNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV 97 (322)
T ss_dssp CCCCEECCT-TCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE
T ss_pred CceEEEEcC-CCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE
Confidence 345788988 7887888888999999998765421 111 1123478888883 5666666
Q ss_pred cCCCeEEEEECCCCCCceeeecCC-CCCCCceEEEeecCCCcEEEEEEe-----------------cCCEEEEEECCCCC
Q 038533 187 SADGSVRIFDLRDKEHSTIIYESP-QPDTPLLRLAWNKQDLRYMATILM-----------------DSNKVVILDIRSPT 248 (337)
Q Consensus 187 ~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~~~~~-----------------d~~~i~i~d~~~~~ 248 (337)
...+.|..+|..++.......... ........+++.+.++++.++-.. ++. |..+|..+ +
T Consensus 98 d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~-v~~~d~~~-~ 175 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGR-LIKYDPST-K 175 (322)
T ss_dssp ETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEE-EEEEETTT-T
T ss_pred ECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCce-EEEEeCCC-C
Confidence 555668888877554222211110 011346778888634554444322 244 88888765 2
Q ss_pred CCeEEeecccceeeEEEeCCCCCCeEE-EEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEE
Q 038533 249 LPVAELERHRACVNAIAWAPQSRRHIC-SVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIA 327 (337)
Q Consensus 249 ~~~~~~~~~~~~v~~~~~~~~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 327 (337)
. +..+.........++++|+++ .|+ +-...+.|.+|++....... ...+..... ...+++.++|..+++..
T Consensus 176 ~-~~~~~~~~~~p~gia~~~dg~-~lyv~d~~~~~I~~~~~~~~~~~~-----~~~~~~~~g-P~gi~~d~~G~l~va~~ 247 (322)
T 2fp8_A 176 E-TTLLLKELHVPGGAEVSADSS-FVLVAEFLSHQIVKYWLEGPKKGT-----AEVLVKIPN-PGNIKRNADGHFWVSSS 247 (322)
T ss_dssp E-EEEEEEEESCCCEEEECTTSS-EEEEEEGGGTEEEEEESSSTTTTC-----EEEEEECSS-EEEEEECTTSCEEEEEE
T ss_pred E-EEEeccCCccCcceEECCCCC-EEEEEeCCCCeEEEEECCCCcCCc-----cceEEeCCC-CCCeEECCCCCEEEEec
Confidence 2 222222223457899999998 554 44667899999987321111 111112223 78899999997665554
Q ss_pred c
Q 038533 328 F 328 (337)
Q Consensus 328 ~ 328 (337)
.
T Consensus 248 ~ 248 (322)
T 2fp8_A 248 E 248 (322)
T ss_dssp E
T ss_pred C
Confidence 3
No 265
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.53 E-value=0.00012 Score=63.06 Aligned_cols=236 Identities=7% Similarity=0.028 Sum_probs=132.8
Q ss_pred CCeEEEecCC--CCcccCcCCccEEEEeCC-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCC
Q 038533 72 PPTKLMFDPN--SSSRKSSSNRHLLASSGD-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSID 148 (337)
Q Consensus 72 ~i~~i~~~~~--~~~~~~~~~~~~l~~~~~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d 148 (337)
....|+|.|+ .. .++++-.. .|+.++..++. .. .+.... .....+++++ +++++++...+
T Consensus 140 ~P~gvavd~~s~~g--------~Lyv~D~~~~I~~id~~~g~--v~-~~~~~~-----~~P~giavd~-dG~lyVad~~~ 202 (433)
T 4hw6_A 140 NIWRMMFDPNSNYD--------DLYWVGQRDAFRHVDFVNQY--VD-IKTTNI-----GQCADVNFTL-NGDMVVVDDQS 202 (433)
T ss_dssp CCCEEEECTTTTTC--------EEEEECBTSCEEEEETTTTE--EE-EECCCC-----SCEEEEEECT-TCCEEEEECCS
T ss_pred CCceEEEccccCCC--------EEEEEeCCCCEEEEECCCCE--EE-EeecCC-----CCccEEEECC-CCCEEEEcCCC
Confidence 4568888884 22 25555443 89999987773 22 222222 5688999998 88855554321
Q ss_pred ---C-cEEEEeCCCccchhhhhccCCceeEEEeCC--CcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEee
Q 038533 149 ---T-TCTIWDIEKGVVETQLIAHDKEVYDICWGE--ARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWN 222 (337)
Q Consensus 149 ---g-~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~ 222 (337)
. .+...+...+...............+++++ +.++++-..++.|+.+|..++.....+... .....-..++|+
T Consensus 203 ~~~~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~-~~~~~~~~ia~d 281 (433)
T 4hw6_A 203 SDTNTGIYLFTRASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMM-DTKGSNFHIVWH 281 (433)
T ss_dssp CTTSEEEEEECGGGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEEC-SCCSSCEEEEEC
T ss_pred CcccceEEEEECCCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEecc-CCCCCcccEEEe
Confidence 1 233333321111000111223456678874 444445556788999998866642233222 112233579999
Q ss_pred cCCCcEEEEEEecCCEEEEEECCCCCCC---eEEeecc---------------cceeeEEEe---------CCCCCCeEE
Q 038533 223 KQDLRYMATILMDSNKVVILDIRSPTLP---VAELERH---------------RACVNAIAW---------APQSRRHIC 275 (337)
Q Consensus 223 ~~~~~~l~~~~~d~~~i~i~d~~~~~~~---~~~~~~~---------------~~~v~~~~~---------~~~~~~~l~ 275 (337)
| +++.|+.+......|+.++....... ...+.+. -.....+++ .+++. +++
T Consensus 282 p-dG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~-lyv 359 (433)
T 4hw6_A 282 P-TGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD-FYF 359 (433)
T ss_dssp T-TSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE-EEE
T ss_pred C-CCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCc-EEE
Confidence 9 88877777766556999886532111 1122211 123567888 77776 677
Q ss_pred EEcCCCcEEEEeCCCCCCCCCCCCCceeeee------------------CCCceeEEEEc-cCCCceEEEEcCCcEEEEe
Q 038533 276 SVGDDSQAFIWELPLPPVAGPNGIDPMSMYS------------------AGSEINQLQWS-PAQPDWLAIAFSNKMQLLK 336 (337)
Q Consensus 276 ~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~------------------~~~~v~~~~~~-~~~~~l~~~~~d~~i~iw~ 336 (337)
+-...++|+.++.. +. ...+.+ .-.....|++. +++..+++=..++.|+.++
T Consensus 360 aD~~n~~I~~~~~~-G~--------v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~ 430 (433)
T 4hw6_A 360 CDRDSHTVRVLTPE-GR--------VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIA 430 (433)
T ss_dssp EETTTTEEEEECTT-SE--------EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEE
T ss_pred EECCCCEEEEECCC-CC--------EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEe
Confidence 76777888888753 11 111111 11346889999 5665444444667887765
No 266
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.53 E-value=5.7e-05 Score=59.63 Aligned_cols=198 Identities=6% Similarity=0.078 Sum_probs=118.5
Q ss_pred CCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeee--cCCCCCcccCCeeEEEeecCCCCeEE
Q 038533 68 DHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVL--NNSKSSEFCAPLTSFDWNEIEPKRIG 143 (337)
Q Consensus 68 ~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~l~ 143 (337)
+-...+..++|+|++. .++++.. + .|...|.. ++ ....+ .+. ...-.+++.+ ++.+++
T Consensus 24 g~~~~lSGla~~~~~~--------~L~aV~d~~~~I~~ld~~-g~--v~~~i~l~g~------~D~EGIa~~~-~g~~~v 85 (255)
T 3qqz_A 24 GITNNISSLTWSAQSN--------TLFSTINKPAAIVEMTTN-GD--LIRTIPLDFV------KDLETIEYIG-DNQFVI 85 (255)
T ss_dssp TCCSCEEEEEEETTTT--------EEEEEEETTEEEEEEETT-CC--EEEEEECSSC------SSEEEEEECS-TTEEEE
T ss_pred CcccCcceeEEeCCCC--------EEEEEECCCCeEEEEeCC-CC--EEEEEecCCC------CChHHeEEeC-CCEEEE
Confidence 4456799999999876 2444443 4 88888887 53 34443 332 4577888887 777667
Q ss_pred EeeCCCcEEEEeCCCccch---hhh------hccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCC---CCCceeee---
Q 038533 144 TCSIDTTCTIWDIEKGVVE---TQL------IAHDKEVYDICWG-EARVFASVSADGSVRIFDLRD---KEHSTIIY--- 207 (337)
Q Consensus 144 ~~~~dg~i~v~d~~~~~~~---~~~------~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~---~~~~~~~~--- 207 (337)
+.-.++.+.++++.....+ ... .........++|+ .++.|+++.......+|.+.. ........
T Consensus 86 s~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~ 165 (255)
T 3qqz_A 86 SDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKA 165 (255)
T ss_dssp EETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHH
T ss_pred EECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchh
Confidence 6666788988887554321 111 1234456899999 565666666554555555531 11111111
Q ss_pred -cCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeeccc---------ceeeEEEeCCCCCCeEEEE
Q 038533 208 -ESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHR---------ACVNAIAWAPQSRRHICSV 277 (337)
Q Consensus 208 -~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~l~~~ 277 (337)
........+..++++|.++.+++...... .|..+|... +++..+.-.. .....|+|.++|. +.++
T Consensus 166 ~~~~~~~~d~S~l~~dp~tg~lliLS~~s~-~L~~~d~~g--~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIv- 240 (255)
T 3qqz_A 166 LQRQFTLDDVSGAEFNQQKNTLLVLSHESR-ALQEVTLVG--EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIV- 240 (255)
T ss_dssp HHHTCCSSCCCEEEEETTTTEEEEEETTTT-EEEEECTTC--CEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEE-
T ss_pred hccccccCCceeEEEcCCCCeEEEEECCCC-eEEEEcCCC--CEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEE-
Confidence 01112346789999996665555555444 499999764 3444433221 2567899999997 5555
Q ss_pred cCCCcEEEEeC
Q 038533 278 GDDSQAFIWEL 288 (337)
Q Consensus 278 ~~dg~i~iw~~ 288 (337)
++.+.++.+.-
T Consensus 241 sE~n~~y~f~~ 251 (255)
T 3qqz_A 241 SEPNRFYRFTP 251 (255)
T ss_dssp ETTTEEEEEEC
T ss_pred cCCceEEEEEe
Confidence 65665555543
No 267
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.50 E-value=3.5e-05 Score=70.38 Aligned_cols=154 Identities=7% Similarity=0.025 Sum_probs=95.2
Q ss_pred EEEeecCCCCeEEEeeCCC-------------------cEEEEeCCCccchhhhhc--cC-------CceeEEEeC-CCc
Q 038533 131 SFDWNEIEPKRIGTCSIDT-------------------TCTIWDIEKGVVETQLIA--HD-------KEVYDICWG-EAR 181 (337)
Q Consensus 131 ~~~~~~~~~~~l~~~~~dg-------------------~i~v~d~~~~~~~~~~~~--~~-------~~v~~~~~~-~~~ 181 (337)
.+++.| +..+++.+..++ .|..+|.++++.+-.++. |. .+.....+. +++
T Consensus 234 ~~a~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~ 312 (668)
T 1kv9_A 234 SMAYDP-ELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGK 312 (668)
T ss_dssp CEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTE
T ss_pred ceEEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCc
Confidence 467877 777888887766 399999999997766543 22 222222222 343
Q ss_pred ---EEEEEcCCCeEEEEECCCCCCceeeecCC---------CCC------------------------CCceEEEeecCC
Q 038533 182 ---VFASVSADGSVRIFDLRDKEHSTIIYESP---------QPD------------------------TPLLRLAWNKQD 225 (337)
Q Consensus 182 ---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~---------~~~------------------------~~i~~~~~~~~~ 225 (337)
.++.++.+|.+.++|.++++......... ... ..-..++++| +
T Consensus 313 ~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp-~ 391 (668)
T 1kv9_A 313 PRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNP-G 391 (668)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEET-T
T ss_pred EEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECC-C
Confidence 68899999999999999988542211110 000 0012367787 5
Q ss_pred CcEEEEEE------------------------------------ecCCEEEEEECCCCCCCeEEeecccceeeEEEeCCC
Q 038533 226 LRYMATIL------------------------------------MDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQ 269 (337)
Q Consensus 226 ~~~l~~~~------------------------------------~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 269 (337)
..++++.. .++. |..||+.+ ++.+.....+ .+.....+...
T Consensus 392 ~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~-l~A~D~~t-G~~~W~~~~~-~~~~~~~~~t~ 468 (668)
T 1kv9_A 392 TGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGA-LLAWDPVK-QKAAWKVPYP-THWNGGTLSTA 468 (668)
T ss_dssp TTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEE-EEEEETTT-TEEEEEEEES-SSCCCCEEEET
T ss_pred CCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccce-EEEEeCCC-CcEEEEccCC-CCCcCceeEeC
Confidence 45544321 1244 89999988 4444444432 23333334445
Q ss_pred CCCeEEEEcCCCcEEEEeCCC
Q 038533 270 SRRHICSVGDDSQAFIWELPL 290 (337)
Q Consensus 270 ~~~~l~~~~~dg~i~iw~~~~ 290 (337)
+. +++.++.||.++.||.+.
T Consensus 469 gg-~vf~g~~dg~l~a~d~~t 488 (668)
T 1kv9_A 469 GN-LVFQGTAAGQMHAYSADK 488 (668)
T ss_dssp TT-EEEEECTTSEEEEEETTT
T ss_pred CC-EEEEECCcccchhhhhhc
Confidence 66 889999999999999983
No 268
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.49 E-value=4.1e-05 Score=69.87 Aligned_cols=149 Identities=9% Similarity=0.037 Sum_probs=84.9
Q ss_pred EEEEeCC-eEEEEecCCCCccceeeecCCCCCcccCCeeE-EEeecCCCCeEEEeeC------CCcEEEEeCCCccchhh
Q 038533 93 LLASSGD-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTS-FDWNEIEPKRIGTCSI------DTTCTIWDIEKGVVETQ 164 (337)
Q Consensus 93 ~l~~~~~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~l~~~~~------dg~i~v~d~~~~~~~~~ 164 (337)
+++...+ .|..+|..+++ .+..+....... ...+.+ ... .+..++++.. +|.|..+|.++++.+..
T Consensus 120 v~v~~~dg~l~alD~~tG~--~~W~~~~~~~~~-~~~~~~~P~v---~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 193 (668)
T 1kv9_A 120 VYVGTLDGRLIALDAKTGK--AIWSQQTTDPAK-PYSITGAPRV---VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWR 193 (668)
T ss_dssp EEEECTTSEEEEEETTTCC--EEEEEECSCTTS-SCBCCSCCEE---ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred EEEEcCCCEEEEEECCCCC--EeeeeccCCCCC-cceecCCCEE---ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEE
Confidence 4444446 99999999994 444443321000 001111 111 1234555543 58999999999987654
Q ss_pred hhcc-------------------------------CCceeEEEeC-CCcEEEEEcCCCe-------------------EE
Q 038533 165 LIAH-------------------------------DKEVYDICWG-EARVFASVSADGS-------------------VR 193 (337)
Q Consensus 165 ~~~~-------------------------------~~~v~~~~~~-~~~~l~~~~~dg~-------------------i~ 193 (337)
+... ......++++ ..++++.++.++. |.
T Consensus 194 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~ 273 (668)
T 1kv9_A 194 FYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSIL 273 (668)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred ecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEE
Confidence 4311 0011235666 4678888877663 99
Q ss_pred EEECCCCCCceeeecCCCCC-------CCceEEEeecCCCc---EEEEEEecCCEEEEEECCCCCCCe
Q 038533 194 IFDLRDKEHSTIIYESPQPD-------TPLLRLAWNKQDLR---YMATILMDSNKVVILDIRSPTLPV 251 (337)
Q Consensus 194 iwd~~~~~~~~~~~~~~~~~-------~~i~~~~~~~~~~~---~l~~~~~d~~~i~i~d~~~~~~~~ 251 (337)
.+|.++++..-..... .+. .+.....+.. +++ .++.++.++. ++++|.++ ++++
T Consensus 274 AlD~~tG~~~W~~~~~-~~~~wd~~~~~~~~~~d~~~-~G~~~~~v~~~~~~G~-l~~lD~~t-G~~l 337 (668)
T 1kv9_A 274 AIRPDTGKLAWHYQVT-PGDSWDFTATQQITLAELNI-DGKPRKVLMQAPKNGF-FYVLDRTN-GKLI 337 (668)
T ss_dssp EECTTTCCEEEEEESS-TTCCSCCCCCSCEEEEEEEE-TTEEEEEEEECCTTSE-EEEEETTT-CCEE
T ss_pred EEcCCCCceeeEeecC-CCccccccCCCCcEEEEecc-CCcEEEEEEEECCCCE-EEEEECCC-CCEe
Confidence 9999999865544332 121 2222222222 454 6778888887 99999988 5444
No 269
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.48 E-value=1.2e-05 Score=70.58 Aligned_cols=190 Identities=8% Similarity=-0.016 Sum_probs=125.6
Q ss_pred CCCeEEEee-CCCcEEEEeCCCccchhhhhc-cCCceeEEEeC---CCcEEEEEc------------------CCCeEEE
Q 038533 138 EPKRIGTCS-IDTTCTIWDIEKGVVETQLIA-HDKEVYDICWG---EARVFASVS------------------ADGSVRI 194 (337)
Q Consensus 138 ~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~-~~~~v~~~~~~---~~~~l~~~~------------------~dg~i~i 194 (337)
+++++.... .++.|.+.|+.+.++...+.- ....+..+++. +++++++++ .++.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 445555554 566799999999886663321 22346777873 477777773 3467999
Q ss_pred EECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecC--------------------------------------
Q 038533 195 FDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS-------------------------------------- 236 (337)
Q Consensus 195 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~-------------------------------------- 236 (337)
.|..+.+....+... +....++++| +++++++.+.+.
T Consensus 180 ID~~t~~v~~qI~Vg----g~pd~~~~sp-dGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~ 254 (595)
T 1fwx_A 180 VDADKWEVAWQVLVS----GNLDNCDADY-EGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELN 254 (595)
T ss_dssp EETTTTEEEEEEEES----SCCCCEEECS-SSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEET
T ss_pred EECCCCeEEEEEEeC----CCccceEECC-CCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEEC
Confidence 999988766555543 2345677888 888888888553
Q ss_pred CEEEEEECCC--CCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCC-----CCCCCC-ceeeeeCC
Q 038533 237 NKVVILDIRS--PTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVA-----GPNGID-PMSMYSAG 308 (337)
Q Consensus 237 ~~i~i~d~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~-----~~~~~~-~~~~~~~~ 308 (337)
. |.+.|.++ ....+..+.. .....++.++|||+++++++..+.+|.++|+. +.. +..... ......-.
T Consensus 255 ~-V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~--~~~~~~~~~l~~~~~v~~~v~vG 330 (595)
T 1fwx_A 255 G-VKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVT--RFDAVFYENADPRSAVVAEPELG 330 (595)
T ss_dssp T-EEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGG--GHHHHHHSCCCGGGGEEECCBCC
T ss_pred c-EEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECc--ccccccccccCcccceEEEcCCC
Confidence 3 77777776 2222444543 23567899999999666677788999999999 321 000000 11122234
Q ss_pred CceeEEEEccCCCceEEEE-cCCcEEEEeC
Q 038533 309 SEINQLQWSPAQPDWLAIA-FSNKMQLLKV 337 (337)
Q Consensus 309 ~~v~~~~~~~~~~~l~~~~-~d~~i~iw~l 337 (337)
.....++|+|+| .+.++. -|+.|.+|++
T Consensus 331 ~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi 359 (595)
T 1fwx_A 331 LGPLHTAFDGRG-NAYTSLFLDSQVVKWNI 359 (595)
T ss_dssp SCEEEEEECTTS-EEEEEETTTTEEEEEEH
T ss_pred CCcceEEECCCC-eEEEEEecCCcEEEEEh
Confidence 568999999999 566555 6999999984
No 270
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.47 E-value=0.00047 Score=62.29 Aligned_cols=222 Identities=9% Similarity=-0.048 Sum_probs=133.6
Q ss_pred EEEEeCCeEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCce
Q 038533 93 LLASSGDFLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEV 172 (337)
Q Consensus 93 ~l~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v 172 (337)
+|.+....|+..++.+.+......+.+- ..+..++|++.++.++.+-..++.|..+++........+.......
T Consensus 9 Ll~s~~~~I~~i~l~~~~~~~~~~~~~~------~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P 82 (628)
T 4a0p_A 9 LLFSRRADIRRISLETNNNNVAIPLTGV------KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYP 82 (628)
T ss_dssp EEEEETTEEEEEESSCTTCEEECCCCSC------SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCC
T ss_pred EEEEeCCcEEEEECCCCCcceEEEcCCC------CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCc
Confidence 5555445999999987642222222221 4577999998455556666678899999986543322222222346
Q ss_pred eEEEeC--CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEec-CCEEEEEECCCCCC
Q 038533 173 YDICWG--EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMD-SNKVVILDIRSPTL 249 (337)
Q Consensus 173 ~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-~~~i~i~d~~~~~~ 249 (337)
..++++ .++++++-...+.|.+.++........ ... .-.....++++| ....|+..... ...|...++.. .
T Consensus 83 ~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l-~~~--~l~~P~~iavdp-~~G~lY~tD~g~~~~I~r~~~dG--~ 156 (628)
T 4a0p_A 83 EGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVL-VWK--DLDSPRALALDP-AEGFMYWTEWGGKPKIDRAAMDG--S 156 (628)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEE-ECS--SCCCEEEEEEET-TTTEEEEEECSSSCEEEEEETTS--C
T ss_pred ceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEE-EeC--CCCCcccEEEcc-CCCeEEEeCCCCCCEEEEEeCCC--C
Confidence 677776 466667777788999999976553332 221 224568999999 44455554422 22377777764 2
Q ss_pred CeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEE-c
Q 038533 250 PVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIA-F 328 (337)
Q Consensus 250 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~ 328 (337)
....+...-.....|++++++..+.++=...+.|...++. .. ....+.........+++..+ .++.+. .
T Consensus 157 ~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~d--G~------~~~v~~~~l~~P~glav~~~--~ly~tD~~ 226 (628)
T 4a0p_A 157 ERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNML--GL------NREVIADDLPHPFGLTQYQD--YIYWTDWS 226 (628)
T ss_dssp SCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETT--SC------SCEEEEECCSCEEEEEEETT--EEEEEETT
T ss_pred ceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCC--CC------ceEEeeccCCCceEEEEECC--EEEEecCC
Confidence 2333333445678999999876355555667889999987 21 12233334445567777653 455554 3
Q ss_pred CCcEEEEe
Q 038533 329 SNKMQLLK 336 (337)
Q Consensus 329 d~~i~iw~ 336 (337)
.+.|...+
T Consensus 227 ~~~I~~~d 234 (628)
T 4a0p_A 227 RRSIERAN 234 (628)
T ss_dssp TTEEEEEE
T ss_pred CCEEEEEE
Confidence 55555443
No 271
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.46 E-value=4.5e-05 Score=68.21 Aligned_cols=136 Identities=10% Similarity=0.013 Sum_probs=80.9
Q ss_pred cEEEEeCCCccchhhhhc--cCC----ceeE---EEeC-CC---cEEEEEcCCCeEEEEECCCCCCceeeecCCCC----
Q 038533 150 TCTIWDIEKGVVETQLIA--HDK----EVYD---ICWG-EA---RVFASVSADGSVRIFDLRDKEHSTIIYESPQP---- 212 (337)
Q Consensus 150 ~i~v~d~~~~~~~~~~~~--~~~----~v~~---~~~~-~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~---- 212 (337)
.|..+|.++++.+-.++. |.. .+.. +... ++ +.++.++.+|.+.++|..+++...........
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~ 352 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFK 352 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccc
Confidence 599999999987665542 211 1111 1111 34 35778899999999999998754433221100
Q ss_pred ------CCC--------------------------ceEEEeecCCCcEEEEEEe--------------------------
Q 038533 213 ------DTP--------------------------LLRLAWNKQDLRYMATILM-------------------------- 234 (337)
Q Consensus 213 ------~~~--------------------------i~~~~~~~~~~~~l~~~~~-------------------------- 234 (337)
..+ -..++++| +..++++...
T Consensus 353 ~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp-~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 431 (571)
T 2ad6_A 353 KVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDP-ESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAM 431 (571)
T ss_dssp EECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEET-TTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred cccccCCceecccccCCCCCCCceEECCCCccccCCCCceECC-CCCEEEEEchhccccccccccccccCCcccccccee
Confidence 001 13467888 5566655542
Q ss_pred -----------cCCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCC
Q 038533 235 -----------DSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPL 290 (337)
Q Consensus 235 -----------d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 290 (337)
++. |..||+.+ ++.+.++.. ...+....+...+. +++.++.||.|+.+|.+.
T Consensus 432 ~~~~~~~~~~~~g~-l~a~D~~t-G~~~W~~~~-~~~~~~~~~~t~gg-~v~~g~~dg~l~a~D~~t 494 (571)
T 2ad6_A 432 YPGPNGPTKKEMGQ-IRAFDLTT-GKAKWTKWE-KFAAWGGTLYTKGG-LVWYATLDGYLKALDNKD 494 (571)
T ss_dssp EECTTSTTSCCCEE-EEEECTTT-CCEEEEEEE-SSCCCSBCEEETTT-EEEEECTTSEEEEEETTT
T ss_pred ccCccccCCCCCCe-EEEEECCC-CCEEEEecC-CCCccceeEEECCC-EEEEEcCCCeEEEEECCC
Confidence 244 89999987 444555442 22232222222345 778899999999999983
No 272
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.45 E-value=0.00039 Score=57.19 Aligned_cols=227 Identities=7% Similarity=-0.077 Sum_probs=134.4
Q ss_pred eEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCC
Q 038533 33 RIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSS 110 (337)
Q Consensus 33 ~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~ 110 (337)
+|+.+. .+.|+..+++........ .......+.+++|.+... .++.+-. . .|..+++.+..
T Consensus 6 ~ll~~~-----~~~I~~i~l~~~~~~~~~----~~~~~~~~~~ld~d~~~~--------~lyw~D~~~~~I~r~~~~g~~ 68 (318)
T 3sov_A 6 LLLYAN-----RRDLRLVDATNGKENATI----VVGGLEDAAAVDFVFSHG--------LIYWSDVSEEAIKRTEFNKTE 68 (318)
T ss_dssp EEEEEC-----EEEEEEEETTCTTSCCEE----EEEEEEEEEEEEEEGGGT--------EEEEEETTTTEEEEEETTSSS
T ss_pred EEEEEc-----cCeEEEEECCCCceEEEE----EecCCCccEEEEEEeCCC--------EEEEEECCCCcEEEEEccCCC
Confidence 455555 577888777655322211 012223467899998655 2555544 3 89999987763
Q ss_pred ccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCceeEEEeC-CCcEEEEEc--
Q 038533 111 IEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWG-EARVFASVS-- 187 (337)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~-- 187 (337)
.. ...+...- .....+++.+..++++++-...+.|.++++........+.........++++ .+..++...
T Consensus 69 ~~-~~~~~~~l-----~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~ 142 (318)
T 3sov_A 69 SV-QNVVVSGL-----LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWG 142 (318)
T ss_dssp CC-CEEEEECC-----SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECS
T ss_pred ce-EEEEcCCC-----CCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecC
Confidence 11 11121111 3456788876456666666677899999986543222222334457889998 344444444
Q ss_pred CCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEe-ecccceeeEEEe
Q 038533 188 ADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAEL-ERHRACVNAIAW 266 (337)
Q Consensus 188 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~ 266 (337)
..+.|...++...... .+... .-..-..++++| ++..|+.+......|..+|+.. .. ...+ .........+++
T Consensus 143 ~~~~I~r~~~dG~~~~-~~~~~--~l~~Pnglavd~-~~~~lY~aD~~~~~I~~~d~dG-~~-~~~~~~~~~~~P~glav 216 (318)
T 3sov_A 143 EVPKIERAGMDGSSRF-IIINS--EIYWPNGLTLDY-EEQKLYWADAKLNFIHKSNLDG-TN-RQAVVKGSLPHPFALTL 216 (318)
T ss_dssp SSCEEEEEETTSCSCE-EEECS--SCSCEEEEEEET-TTTEEEEEETTTTEEEEEETTS-CS-CEEEECSCCSCEEEEEE
T ss_pred CCCEEEEEEcCCCCeE-EEEEC--CCCCccEEEEec-cCCEEEEEECCCCEEEEEcCCC-Cc-eEEEecCCCCCceEEEE
Confidence 3578888888754432 22221 124568899998 6677777666555699999874 22 2222 223345567777
Q ss_pred CCCCCCeEEEEcCCCcEEEEeCCC
Q 038533 267 APQSRRHICSVGDDSQAFIWELPL 290 (337)
Q Consensus 267 ~~~~~~~l~~~~~dg~i~iw~~~~ 290 (337)
..+ . ++.+-...+.|..++...
T Consensus 217 ~~~-~-lywtd~~~~~V~~~~~~~ 238 (318)
T 3sov_A 217 FED-I-LYWTDWSTHSILACNKYT 238 (318)
T ss_dssp ETT-E-EEEEETTTTEEEEEETTT
T ss_pred eCC-E-EEEEecCCCeEEEEECCC
Confidence 533 3 667766778888888863
No 273
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.44 E-value=2.9e-05 Score=72.01 Aligned_cols=193 Identities=11% Similarity=0.037 Sum_probs=110.4
Q ss_pred CeeEEEee-cCCCCeEEEeeC-CC----cEEEEeCCCc-cchhhhhccCCceeEEEeC-CCcEEEEEcCC-----CeEEE
Q 038533 128 PLTSFDWN-EIEPKRIGTCSI-DT----TCTIWDIEKG-VVETQLIAHDKEVYDICWG-EARVFASVSAD-----GSVRI 194 (337)
Q Consensus 128 ~i~~~~~~-~~~~~~l~~~~~-dg----~i~v~d~~~~-~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d-----g~i~i 194 (337)
.+...+|| | ++++|+-+.. +| .|+++|+.++ +.+... -......++|+ +++.|+....+ ..|..
T Consensus 175 ~~~~~~~S~P-DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~--~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPP-EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADK--VSGTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTT-TTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCC--EEEECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCC-CCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcc--ccCceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 57789999 9 9988775533 33 4999999988 632211 11124578899 67777766654 36888
Q ss_pred EECCCCCCc-eeeecCCCCCCCceEEEeecCCCcEEEEEEecC--CEEEEEECCCCCCCe--EEe-ecccceeeEEEeCC
Q 038533 195 FDLRDKEHS-TIIYESPQPDTPLLRLAWNKQDLRYMATILMDS--NKVVILDIRSPTLPV--AEL-ERHRACVNAIAWAP 268 (337)
Q Consensus 195 wd~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~--~~i~i~d~~~~~~~~--~~~-~~~~~~v~~~~~~~ 268 (337)
+++.++... ..++... .......+.|+| ++++|+..+.++ ..|+++|+.++.... ..+ ........++.|+.
T Consensus 252 ~~lgt~~~~~~lv~~~~-~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~ 329 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEH-NPLFSAFMYKAA-DTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG 329 (751)
T ss_dssp EETTSCGGGCEEEEECC-CTTCEEEEEECT-TSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET
T ss_pred EECCCCchhcEEEEecC-CCceEEEEEECC-CCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee
Confidence 888776532 2333321 223467789999 898887766432 358889998742222 333 22334455565554
Q ss_pred CCCCeEEEEcCC--C--cEEEEeCCCCCCCCCCCCCcee-eeeCCC--ceeEEEEccCCCceE-EEEcCCcEEEE
Q 038533 269 QSRRHICSVGDD--S--QAFIWELPLPPVAGPNGIDPMS-MYSAGS--EINQLQWSPAQPDWL-AIAFSNKMQLL 335 (337)
Q Consensus 269 ~~~~~l~~~~~d--g--~i~iw~~~~~~~~~~~~~~~~~-~~~~~~--~v~~~~~~~~~~~l~-~~~~d~~i~iw 335 (337)
.+. +++....+ + .|..+++. +.. .... +..+.. .+..+.+. +..|+ +...++..+||
T Consensus 330 g~~-l~~~t~~~~a~~~~L~~~d~~--~~~-----~~~~~li~~~~~~~l~~~~~~--~~~lv~~~~~~g~~~l~ 394 (751)
T 2xe4_A 330 TSH-LVILTNEGGAVNHKLLIAPRG--QPS-----DWSHVLVDHSEDVFMESIAVR--SNYLVVAGRRAGLTRIW 394 (751)
T ss_dssp TTE-EEEEECTTTCTTCEEEEEETT--STT-----CCCCEEECCCSSEEEEEEEEC--SSEEEEEEEETTEEEEE
T ss_pred CCE-EEEEeCCCCCCCcEEEEEcCC--Ccc-----cceeeEECCCCCcEEEEEEEE--CCEEEEEEEeCCEEEEE
Confidence 443 55565554 3 45555554 211 1112 233333 34555554 44454 44567765554
No 274
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.38 E-value=0.00038 Score=59.95 Aligned_cols=153 Identities=14% Similarity=0.194 Sum_probs=91.7
Q ss_pred CCeEEEecC-CCCcccCcCCccEEEEeCC-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeC-C
Q 038533 72 PPTKLMFDP-NSSSRKSSSNRHLLASSGD-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSI-D 148 (337)
Q Consensus 72 ~i~~i~~~~-~~~~~~~~~~~~~l~~~~~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-d 148 (337)
....|+++| ++. .++++-.. .|+.+|+.++.. ..... .. .....++|++ +++.|+++.. +
T Consensus 138 ~P~~lavdp~~~g--------~Lyv~d~~~~I~~id~~~~~v--~~~~~-~~-----~~P~~ia~d~-~G~~lyvad~~~ 200 (430)
T 3tc9_A 138 GAVWLSFDPKNHN--------HLYLVGEQHPTRLIDFEKEYV--STVYS-GL-----SKVRTICWTH-EADSMIITNDQN 200 (430)
T ss_dssp CCCEEEEETTEEE--------EEEEEEBTEEEEEEETTTTEE--EEEEC-CC-----SCEEEEEECT-TSSEEEEEECCS
T ss_pred CCCEEEECCCCCC--------eEEEEeCCCcEEEEECCCCEE--EEEec-CC-----CCcceEEEeC-CCCEEEEEeCCC
Confidence 356778887 233 25555554 888899887632 22222 22 5678999998 8885555543 2
Q ss_pred C----cEEEEeCCCccch--hhhhccCCceeEEEeCC--CcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEE
Q 038533 149 T----TCTIWDIEKGVVE--TQLIAHDKEVYDICWGE--ARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLA 220 (337)
Q Consensus 149 g----~i~v~d~~~~~~~--~~~~~~~~~v~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~ 220 (337)
+ .+.+.+. .+... ..+. .......+++++ +.++++-..++.|..+|............. .......++
T Consensus 201 ~~~~~~v~~~~~-~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~--~~~~P~gia 276 (430)
T 3tc9_A 201 NNDRPNNYILTR-ESGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQ--DSGWEFHIQ 276 (430)
T ss_dssp CTTSEEEEEEEG-GGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECS--SSSCCEEEE
T ss_pred CcccceEEEEeC-CCceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcC--CCCcceeEE
Confidence 2 2333443 33222 1222 223456788884 555556667789999999866532222211 123567899
Q ss_pred eecCCCcEEEEEEecCCEEEEEECCC
Q 038533 221 WNKQDLRYMATILMDSNKVVILDIRS 246 (337)
Q Consensus 221 ~~~~~~~~l~~~~~d~~~i~i~d~~~ 246 (337)
|+| ++++|+.+......|..++...
T Consensus 277 ~~p-dG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 277 FHP-SGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp ECT-TSSEEEEEETTTTEEEEEEEET
T ss_pred EcC-CCCEEEEEECCCCEEEEEeCCc
Confidence 999 8887777776666699988753
No 275
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.36 E-value=0.00068 Score=55.75 Aligned_cols=225 Identities=8% Similarity=-0.063 Sum_probs=132.1
Q ss_pred eEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCC
Q 038533 33 RIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSS 110 (337)
Q Consensus 33 ~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~ 110 (337)
+|+.+. .+.|+..+++....... ...-..+..++|.+.+. .++.+-. + .|..+++.+..
T Consensus 3 ~ll~~~-----~~~I~~i~~~~~~~~~~------~~~~~~p~g~~~d~~~~--------~ly~~D~~~~~I~~~~~~g~~ 63 (316)
T 1ijq_A 3 YLFFTN-----RHEVRKMTLDRSEYTSL------IPNLRNVVALDTEVASN--------RIYWSDLSQRMICSTQLDRAH 63 (316)
T ss_dssp EEEEEC-----BSSEEEEETTSCCCEEE------ECSCSSEEEEEEETTTT--------EEEEEETTTTEEEEEEC----
T ss_pred EEEEEC-----CCeEEEEECCCcceEeh------hcCCCceEEEEEEeCCC--------EEEEEECCCCcEEEEECCCCC
Confidence 456666 57788877765433222 12334578999998765 2555554 3 99999987610
Q ss_pred --ccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCceeEEEeC-CCcEEEEEc
Q 038533 111 --IEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWG-EARVFASVS 187 (337)
Q Consensus 111 --~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~ 187 (337)
......+...- .....+++.+..++++++-..++.|.+.++........+.........++++ .+..++.+.
T Consensus 64 ~~~~~~~~~~~~~-----~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d 138 (316)
T 1ijq_A 64 GVSSYDTVISRDI-----QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTD 138 (316)
T ss_dssp ----CEEEECSSC-----SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEE
T ss_pred CCcccEEEEeCCC-----CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEc
Confidence 01122222211 3456888876355566666678899999986543222222233467889998 355444444
Q ss_pred C-C-CeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeec---ccceee
Q 038533 188 A-D-GSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELER---HRACVN 262 (337)
Q Consensus 188 ~-d-g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~---~~~~v~ 262 (337)
. . +.|...++.... ...+... .-.....++++| ++..|+.+......|..+|+.. . ....+.. ......
T Consensus 139 ~~~~~~I~~~~~dG~~-~~~~~~~--~~~~P~gla~d~-~~~~lY~~D~~~~~I~~~d~dg-~-~~~~~~~~~~~~~~P~ 212 (316)
T 1ijq_A 139 WGTPAKIKKGGLNGVD-IYSLVTE--NIQWPNGITLDL-LSGRLYWVDSKLHSISSIDVNG-G-NRKTILEDEKRLAHPF 212 (316)
T ss_dssp CSSSCEEEEEETTSCC-EEEEECS--SCSCEEEEEEET-TTTEEEEEETTTTEEEEEETTS-C-SCEEEEECTTTTSSEE
T ss_pred cCCCCeEEEEcCCCCC-eEEEEEC--CCCCceEEEEec-cCCEEEEEECCCCeEEEEecCC-C-ceEEEeecCCccCCcE
Confidence 3 3 688888886543 2222221 124568999998 6667766665555599999874 2 2333321 123456
Q ss_pred EEEeCCCCCCeEEEEcCCCcEEEEeCC
Q 038533 263 AIAWAPQSRRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 263 ~~~~~~~~~~~l~~~~~dg~i~iw~~~ 289 (337)
.+++. .+. ++++-...+.|..++..
T Consensus 213 giav~-~~~-ly~~d~~~~~V~~~~~~ 237 (316)
T 1ijq_A 213 SLAVF-EDK-VFWTDIINEAIFSANRL 237 (316)
T ss_dssp EEEEE-TTE-EEEEETTTTEEEEEETT
T ss_pred EEEEE-CCE-EEEEECCCCeEEEEeCC
Confidence 77774 344 66777777888888875
No 276
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.33 E-value=0.0015 Score=60.51 Aligned_cols=183 Identities=10% Similarity=0.029 Sum_probs=111.8
Q ss_pred EEEEeCC-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCcc----chhhhhc
Q 038533 93 LLASSGD-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGV----VETQLIA 167 (337)
Q Consensus 93 ~l~~~~~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~----~~~~~~~ 167 (337)
+|..+.. .|+..++...+ ....+... ..+..++|++.++.++++-...+.|+.+++.... ....+..
T Consensus 397 ~Ll~an~~~Ir~i~l~~~~--~~~l~~~~------~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~ 468 (791)
T 3m0c_C 397 YLFFTNRHEVRKMTLDRSE--YTSLIPNL------RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR 468 (791)
T ss_dssp EEEEECBSSEEEECTTSCC--CEEEECSC------SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECS
T ss_pred ccccccccceeEeeccCCc--ceeeecCC------CceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEec
Confidence 4444444 88888887763 22233332 5677999998455566666667889999886531 1222222
Q ss_pred cCCceeEEEeC--CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecC-CEEEEEEC
Q 038533 168 HDKEVYDICWG--EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS-NKVVILDI 244 (337)
Q Consensus 168 ~~~~v~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~-~~i~i~d~ 244 (337)
.......|+++ .++++++-...+.|.+.++........+. . .......|+++| ...+|+...... ..|...++
T Consensus 469 ~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~-~--~l~~P~gIaVDp-~~g~LYwtD~g~~~~I~~~~~ 544 (791)
T 3m0c_C 469 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-E--NGSKPRAIVVDP-VHGFMYWTDWGTPAKIKKGGL 544 (791)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE-C--TTCCEEEEEEET-TTTEEEEEECSSSCEEEEEET
T ss_pred CCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEe-C--CCCCcceEEEec-CCCCEEEecCCCCCeEEEEec
Confidence 33455677777 35667777778999999998655333332 2 224578999999 555555544322 34888888
Q ss_pred CCCCCCeEEe-ecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCC
Q 038533 245 RSPTLPVAEL-ERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 245 ~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 289 (337)
.. .....+ ...-...+.|++.+.+..++++=...+.|...++.
T Consensus 545 dG--~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~d 588 (791)
T 3m0c_C 545 NG--VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 588 (791)
T ss_dssp TS--CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CC--CceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecC
Confidence 64 223333 22335678999998776344454556788888887
No 277
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.33 E-value=0.0011 Score=56.55 Aligned_cols=227 Identities=8% Similarity=-0.049 Sum_probs=135.2
Q ss_pred cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCC
Q 038533 31 GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGD 108 (337)
Q Consensus 31 ~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~ 108 (337)
..+|+.+. .+.|+..+++....... ......+..|+|.+... .++.+-. . .|..+++..
T Consensus 83 ~~~ll~~~-----~~~I~~i~l~~~~~~~~------~~~~~~~~~l~~d~~~~--------~lywsD~~~~~I~~~~~~g 143 (400)
T 3p5b_L 83 IAYLFFTN-----RHEVRKMTLDRSEYTSL------IPNLRNVVALDTEVASN--------RIYWSDLSQRMICSTQLDR 143 (400)
T ss_dssp SCEEEEEE-----TTEEEEECTTSCSCEEE------ECSCSCEEEEEEETTTT--------EEEEEETTTTEEEEEEC--
T ss_pred cceeEEec-----cceeEEEccCCcceeEe------ccccCcceEEeeeeccC--------ceEEEecCCCeEEEEEccc
Confidence 44566655 67777766654432222 23445688999998665 2555544 3 888888876
Q ss_pred CC--ccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCceeEEEeCC-CcEEEE
Q 038533 109 SS--IEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGE-ARVFAS 185 (337)
Q Consensus 109 ~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~~ 185 (337)
.. ......+.... .....+++.+..++++++-...+.|.+.+++.......+.........+++++ +..|+.
T Consensus 144 ~~~~~~~~~~~~~~~-----~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~ 218 (400)
T 3p5b_L 144 AHGVSSYDTVISRDI-----QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYW 218 (400)
T ss_dssp ----CCCEEEECSSC-----SCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEE
T ss_pred CCCCCcceEEEeCCC-----CCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEE
Confidence 31 01222222222 45678888864566666666788999999875543333333334578899983 444444
Q ss_pred Ec-C-CCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEe-ec--ccce
Q 038533 186 VS-A-DGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAEL-ER--HRAC 260 (337)
Q Consensus 186 ~~-~-dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~-~~--~~~~ 260 (337)
.. . .+.|...++.......... . .-.....+++++ .+..|+.+......|..+|+.. .. ...+ .. ....
T Consensus 219 td~~~~~~I~~~~~dG~~~~~~~~-~--~l~~P~glavd~-~~~~lY~aD~~~~~I~~~d~dG-~~-~~~~~~~~~~l~~ 292 (400)
T 3p5b_L 219 TDWGTPAKIKKGGLNGVDIYSLVT-E--NIQWPNGITLDL-LSGRLYWVDSKLHSISSIDVNG-GN-RKTILEDEKRLAH 292 (400)
T ss_dssp EECSSSCCEEEEETTSCSCEEEEC-S--SCSCEEEEEEET-TTTEEEEEETTTTEEEEEETTS-CC-CEEEEECSSTTSS
T ss_pred EeCCCCCEEEEEeCCCCccEEEEE-C--CCCceEEEEEEe-CCCEEEEEECCCCEEEEEeCCC-Cc-cEEEEeCCCCCCC
Confidence 43 2 4789888887655333322 1 124678899998 6667776665555699999875 22 2233 21 1234
Q ss_pred eeEEEeCCCCCCeEEEEcCCCcEEEEeCC
Q 038533 261 VNAIAWAPQSRRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 261 v~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 289 (337)
...+++. .+. ++.+-...+.|..++..
T Consensus 293 P~gl~v~-~~~-lywtd~~~~~V~~~~~~ 319 (400)
T 3p5b_L 293 PFSLAVF-EDK-VFWTDIINEAIFSANRL 319 (400)
T ss_dssp EEEEEEE-TTE-EEEEESSSCSEEEEESS
T ss_pred CEEEEEe-CCE-EEEecCCCCeEEEEEcC
Confidence 4567663 233 67777777889888865
No 278
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.32 E-value=4.6e-05 Score=70.61 Aligned_cols=195 Identities=13% Similarity=0.134 Sum_probs=112.7
Q ss_pred CCCC-CCeEEEec-CCCCcccCcCCccEEEEe-----CC--eEEEEecCCC-CccceeeecCCCCCcccCCeeEEEeecC
Q 038533 68 DHPY-PPTKLMFD-PNSSSRKSSSNRHLLASS-----GD--FLRLWDVGDS-SIEPVAVLNNSKSSEFCAPLTSFDWNEI 137 (337)
Q Consensus 68 ~~~~-~i~~i~~~-~~~~~~~~~~~~~~l~~~-----~~--~v~vw~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 137 (337)
+|.. .+...+|| ||++ +||-+ ++ .|+++|+.++ +. ....+. .....++|+|
T Consensus 170 ~~~~~~~~~~~~S~PDG~---------~lAy~~~~~G~~~~~l~v~dl~~g~~~-l~~~~~--------~~~~~~~Wsp- 230 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHD---------LVAFSVDMSGNEVYTIEFKRISDPSQT-IADKVS--------GTNGEIVWGP- 230 (751)
T ss_dssp TCSCCEEEEEEECTTTTC---------EEEEEEESSSSSCEEEEEEETTCTTCC-CCCCEE--------EECSCCEECS-
T ss_pred CCCeEEEeeeEecCCCCC---------EEEEEEeCCCCceEEEEEEECCCCCEe-CCcccc--------CceeeEEEec-
Confidence 3443 57789999 9998 77743 22 5999999987 52 111121 2234689999
Q ss_pred CCCeEEEeeCC-----CcEEEEeCCCccch--hhhh-ccCCceeEEEeC-CCcEEEEEc---CCCeEEEEECCCCCC-c-
Q 038533 138 EPKRIGTCSID-----TTCTIWDIEKGVVE--TQLI-AHDKEVYDICWG-EARVFASVS---ADGSVRIFDLRDKEH-S- 203 (337)
Q Consensus 138 ~~~~l~~~~~d-----g~i~v~d~~~~~~~--~~~~-~~~~~v~~~~~~-~~~~l~~~~---~dg~i~iwd~~~~~~-~- 203 (337)
+++.|+....+ ..|.++++.+++.. ..+. ........+.|+ ++++|+..+ ....|.++|+.++.. .
T Consensus 231 Dg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~ 310 (751)
T 2xe4_A 231 DHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNT 310 (751)
T ss_dssp STTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCC
T ss_pred CCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCce
Confidence 88877776654 25888888776432 2222 222345678899 788777655 244688899987632 2
Q ss_pred -eeeecCCCCCCCceEEEeecCCCcEEEEEEecC----CEEEEEECCCCCCCeEE-eecccc--eeeEEEeCCCCCCeEE
Q 038533 204 -TIIYESPQPDTPLLRLAWNKQDLRYMATILMDS----NKVVILDIRSPTLPVAE-LERHRA--CVNAIAWAPQSRRHIC 275 (337)
Q Consensus 204 -~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~----~~i~i~d~~~~~~~~~~-~~~~~~--~v~~~~~~~~~~~~l~ 275 (337)
..+.. .......++.|+. +..|+..+..+ ..|..+|+.++.. ... +..+.. .+..+.+. +..+++
T Consensus 311 ~~~l~~--~~~~~~~s~~~~~--g~~l~~~t~~~~a~~~~L~~~d~~~~~~-~~~~li~~~~~~~l~~~~~~--~~~lv~ 383 (751)
T 2xe4_A 311 LEIVRP--REKGVRYDVQMHG--TSHLVILTNEGGAVNHKLLIAPRGQPSD-WSHVLVDHSEDVFMESIAVR--SNYLVV 383 (751)
T ss_dssp EEESSC--CCTTCCEEEEEET--TTEEEEEECTTTCTTCEEEEEETTSTTC-CCCEEECCCSSEEEEEEEEC--SSEEEE
T ss_pred eEEeec--CCCCceEEEeeee--CCEEEEEeCCCCCCCcEEEEEcCCCccc-ceeeEECCCCCcEEEEEEEE--CCEEEE
Confidence 22222 2234556666653 45444444322 2477778764222 222 222332 45556665 443777
Q ss_pred EEcCCCcEEEEeC
Q 038533 276 SVGDDSQAFIWEL 288 (337)
Q Consensus 276 ~~~~dg~i~iw~~ 288 (337)
+...++..++|-+
T Consensus 384 ~~~~~g~~~l~~~ 396 (751)
T 2xe4_A 384 AGRRAGLTRIWTM 396 (751)
T ss_dssp EEEETTEEEEEEE
T ss_pred EEEeCCEEEEEEE
Confidence 7788886555433
No 279
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.29 E-value=0.0023 Score=59.22 Aligned_cols=227 Identities=8% Similarity=-0.049 Sum_probs=128.5
Q ss_pred ceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCC
Q 038533 32 QRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDS 109 (337)
Q Consensus 32 ~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~ 109 (337)
.+|+.+. ...|+..+++....... ......+.+|+|.+... .++.+-. . .|+.+++...
T Consensus 396 p~Ll~an-----~~~Ir~i~l~~~~~~~l------~~~~~~~~gl~~d~~~~--------~lY~sD~~~~~I~~~~l~g~ 456 (791)
T 3m0c_C 396 AYLFFTN-----RHEVRKMTLDRSEYTSL------IPNLRNVVALDTEVASN--------RIYWSDLSQRMICSTQLDRA 456 (791)
T ss_dssp CEEEEEC-----BSSEEEECTTSCCCEEE------ECSCSSEEEEEEETTTT--------EEEEEETTTTEEEEEEC---
T ss_pred ccccccc-----ccceeEeeccCCcceee------ecCCCceEEEeecccCC--------eeEEeeccceeEEEEeccCC
Confidence 3455544 55666655544322222 23345578899998655 2555544 3 8888888753
Q ss_pred Cc--cceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCceeEEEeC-CCcEEEEE
Q 038533 110 SI--EPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWG-EARVFASV 186 (337)
Q Consensus 110 ~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~ 186 (337)
.. .....+.... .....|++.+..++++++-...+.|.+.++........+.........|+++ ....|+..
T Consensus 457 ~~~~~~~~vi~~~l-----~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwt 531 (791)
T 3m0c_C 457 HGVSSYDTVISRDI-----QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWT 531 (791)
T ss_dssp -----CEEEECSSC-----SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEE
T ss_pred CCCcceeEEEecCC-----CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEe
Confidence 11 1222232222 4456788887445667776778899999986544322222333457899998 33444444
Q ss_pred c-CC-CeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeec--ccceee
Q 038533 187 S-AD-GSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELER--HRACVN 262 (337)
Q Consensus 187 ~-~d-g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~--~~~~v~ 262 (337)
. .. +.|...++........+ .. .-.....|++++ ....|+.+......|..+|+.. ......+.. .-....
T Consensus 532 D~g~~~~I~~~~~dG~~~~~lv-~~--~l~~P~GLavD~-~~~~LYwaD~~~~~I~~~d~dG-~~~~~v~~~~~~l~~P~ 606 (791)
T 3m0c_C 532 DWGTPAKIKKGGLNGVDIYSLV-TE--NIQWPNGITLDL-LSGRLYWVDSKLHSISSIDVNG-GNRKTILEDEKRLAHPF 606 (791)
T ss_dssp ECSSSCEEEEEETTSCCEEEEE-CS--SCSCEEEEEEET-TTTEEEEEETTTTEEEEEETTS-CSCEEEEECTTTTSSEE
T ss_pred cCCCCCeEEEEecCCCceEEEE-eC--CCCCceEEEEec-CCCeEEEEeCCCCcEEEEecCC-CceEEEecCCCccCCCC
Confidence 3 33 78999998765533332 22 224678899998 5666666665555599999865 222222222 112345
Q ss_pred EEEeCCCCCCeEEEEcCCCcEEEEeCC
Q 038533 263 AIAWAPQSRRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 263 ~~~~~~~~~~~l~~~~~dg~i~iw~~~ 289 (337)
.|++..+ . ++++-...+.|...+..
T Consensus 607 glav~~~-~-lYwtD~~~~~I~~~dk~ 631 (791)
T 3m0c_C 607 SLAVFED-K-VFWTDIINEAIFSANRL 631 (791)
T ss_dssp EEEEETT-E-EEEEETTTTEEEEEETT
T ss_pred EEEEeCC-E-EEEEECCCCEEEEEeCC
Confidence 6666432 3 66666667778777765
No 280
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.28 E-value=0.0017 Score=58.11 Aligned_cols=55 Identities=15% Similarity=0.119 Sum_probs=37.9
Q ss_pred CcEEEEeCCCccchhhhhc--cC--------CceeEEEe--CCC---cEEEEEcCCCeEEEEECCCCCCce
Q 038533 149 TTCTIWDIEKGVVETQLIA--HD--------KEVYDICW--GEA---RVFASVSADGSVRIFDLRDKEHST 204 (337)
Q Consensus 149 g~i~v~d~~~~~~~~~~~~--~~--------~~v~~~~~--~~~---~~l~~~~~dg~i~iwd~~~~~~~~ 204 (337)
+.|..+|.++++.+-.++. |. .++. +.. .++ ..++.++.+|.++++|.++++...
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw 360 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQN 360 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEE
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEec
Confidence 5899999999997766542 21 1121 122 134 478889999999999999887543
No 281
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.27 E-value=0.0012 Score=57.33 Aligned_cols=238 Identities=10% Similarity=0.047 Sum_probs=133.6
Q ss_pred CeEEEecCC-CCcccCcCCccEEEEeCC--eEEEEecCCCCccceeeecCCCCCcccCCeeEEEe-------ecCCCCeE
Q 038533 73 PTKLMFDPN-SSSRKSSSNRHLLASSGD--FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDW-------NEIEPKRI 142 (337)
Q Consensus 73 i~~i~~~~~-~~~~~~~~~~~~l~~~~~--~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-------~~~~~~~l 142 (337)
...|+|.|. .. +++++..+ .|++.|+.++.... ...... ..+ .....++| ++ +++.|
T Consensus 141 p~~la~dp~~~~--------~Lyv~~~~~~~i~~ID~~~~~v~~--l~~~~~-~~~-~~p~~ia~~~~~~~~d~-~G~~l 207 (496)
T 3kya_A 141 NGRLAFDPLNKD--------HLYICYDGHKAIQLIDLKNRMLSS--PLNINT-IPT-NRIRSIAFNKKIEGYAD-EAEYM 207 (496)
T ss_dssp EEEEEEETTEEE--------EEEEEEETEEEEEEEETTTTEEEE--EECCTT-SSC-SBEEEEEECCCBTTTBC-TTCEE
T ss_pred CCEEEEccCCCC--------EEEEEECCCCeEEEEECCCCEEEE--EEccCc-ccc-CCCcEEEEeecccccCC-CCCEE
Confidence 457888873 33 25555543 89999988874322 222211 011 45789999 98 88855
Q ss_pred EEeeCCC-------cEEEEeCCC-ccch-----hhhhccCCceeEEEeCC--CcEEEEEcCCCeEEEEECC-------CC
Q 038533 143 GTCSIDT-------TCTIWDIEK-GVVE-----TQLIAHDKEVYDICWGE--ARVFASVSADGSVRIFDLR-------DK 200 (337)
Q Consensus 143 ~~~~~dg-------~i~v~d~~~-~~~~-----~~~~~~~~~v~~~~~~~--~~~l~~~~~dg~i~iwd~~-------~~ 200 (337)
+++...+ .|.+++... +... ..+.. ......++.++ +.++++-..++.|..+|+. ++
T Consensus 208 yvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg 286 (496)
T 3kya_A 208 IVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNG 286 (496)
T ss_dssp EEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTT
T ss_pred EEEeCCCCCcccCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCc
Confidence 5555443 266665333 2221 12221 12345677773 5566667778889999997 45
Q ss_pred CC-----------ceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCe---EEeecc---c-----
Q 038533 201 EH-----------STIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPV---AELERH---R----- 258 (337)
Q Consensus 201 ~~-----------~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~---~~~~~~---~----- 258 (337)
.. ...+... ........++|+| ++++|+.+.....+|+.+|.......+ ..+.+. .
T Consensus 287 ~~~tp~~~~~~g~~~~l~~~-~~~~~p~~ia~~p-~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG 364 (496)
T 3kya_A 287 GSWDPIVKNNPNTFKQLFTI-ADPSWEFQIFIHP-TGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDD 364 (496)
T ss_dssp CCCCCBGGGCTTTEEEEEEC-SSSSCCEEEEECT-TSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCC
T ss_pred eeecccccccccccceeEec-CCCCCceEEEEcC-CCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCC
Confidence 43 1122222 1234568999999 898777777666669987654311111 222221 0
Q ss_pred -------ceee-EEEeC-------CCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeee-----------------
Q 038533 259 -------ACVN-AIAWA-------PQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYS----------------- 306 (337)
Q Consensus 259 -------~~v~-~~~~~-------~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~----------------- 306 (337)
.... .++.. +++. ++++=....+|+.++.. +. ...+.+
T Consensus 365 ~~~~a~f~~P~~gv~vd~~~~~~~~~g~-lyVaD~~N~rIr~i~~~-G~--------v~TiaG~g~~~~~~~~~~~G~~d 434 (496)
T 3kya_A 365 VGTEARMNNPCQGVFVKNPDYTGEEEYD-FYFVDRLNFCVRKVTPE-GI--------VSTYAGRGASTSLADGNQWGTDD 434 (496)
T ss_dssp BGGGCBCSSEEEEEEEECTTCCSSCCEE-EEEEEGGGTEEEEECTT-CB--------EEEEEESCTTHHHHHSCSCCCCC
T ss_pred cccccccCCCeEEEEEccccccccCCCe-EEEEECCCCEEEEEeCC-CC--------EEEEecccccccccCccccccCC
Confidence 1233 34443 4555 66666677888888843 11 111111
Q ss_pred -------CCCceeEEEEccC-CCceEEEEcCCcEEEEe
Q 038533 307 -------AGSEINQLQWSPA-QPDWLAIAFSNKMQLLK 336 (337)
Q Consensus 307 -------~~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~ 336 (337)
.-.....|++.++ +..+++=..+.+|+.++
T Consensus 435 G~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~ 472 (496)
T 3kya_A 435 GDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTIS 472 (496)
T ss_dssp EETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEE
Confidence 1134678999997 65444444567888765
No 282
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.25 E-value=1.5e-05 Score=72.95 Aligned_cols=175 Identities=10% Similarity=0.061 Sum_probs=102.4
Q ss_pred CeEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEE-EeeCCCcEEEEeCCC----ccchhhhhccCCcee
Q 038533 99 DFLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIG-TCSIDTTCTIWDIEK----GVVETQLIAHDKEVY 173 (337)
Q Consensus 99 ~~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~-~~~~dg~i~v~d~~~----~~~~~~~~~~~~~v~ 173 (337)
..|+..++.+.+. ...+... ..+..++|++ ....|. +-...+.|+.+++.. ......+........
T Consensus 386 ~~I~~id~~~~~~--~~~~~~~------~~p~gla~d~-~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~ 456 (699)
T 1n7d_A 386 HEVRKMTLDRSEY--TSLIPNL------RNVVALDTEV-ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 456 (699)
T ss_dssp TC-CEECTTSCCE--ECCSCCC------TTCCCCEEET-TTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CC
T ss_pred cceEEEeCCCCcc--eeeeccC------cceEEEcccc-ccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcc
Confidence 3788888877632 2222221 3466899998 545444 444568899999875 222222221222345
Q ss_pred EEEeC--CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEe-c-CCEEEEEECCCCCC
Q 038533 174 DICWG--EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILM-D-SNKVVILDIRSPTL 249 (337)
Q Consensus 174 ~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-d-~~~i~i~d~~~~~~ 249 (337)
.|++. .++++++-...+.|.++++........ ... .......++++| .+.+|+.+.. . +. |..+++....
T Consensus 457 glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l-~~~--~~~~P~giavDp-~~g~ly~td~~~~~~-I~~~~~dG~~- 530 (699)
T 1n7d_A 457 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTL-FRE--QGSKPRAIVVDP-VHGFMYWTDWGTPAK-IKKGGLNGVD- 530 (699)
T ss_dssp CEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEE-CCC--SSCCCCCEECCS-SSSCCEECCCSSSCC-EEBCCSSSCC-
T ss_pred eEEEEeeCCcEEEEeccCCeEEEEecCCCceEEE-EeC--CCCCcceEEEcc-CCCcEEEcccCCCCe-EEEEeCCCCC-
Confidence 67776 355666656678999999876543222 221 123457788988 4444444332 2 45 8887775422
Q ss_pred CeEEe-ecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCC
Q 038533 250 PVAEL-ERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 250 ~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 289 (337)
...+ ...-...+.|+|+|++..++++-+..+.|..+++.
T Consensus 531 -~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~d 570 (699)
T 1n7d_A 531 -IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 570 (699)
T ss_dssp -CCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSS
T ss_pred -eeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccC
Confidence 2222 22234567899999876466666777889999987
No 283
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.21 E-value=2.8e-05 Score=70.99 Aligned_cols=226 Identities=7% Similarity=-0.044 Sum_probs=118.7
Q ss_pred EEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-----
Q 038533 26 AMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG----- 98 (337)
Q Consensus 26 ~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~----- 98 (337)
++++. ++++++|+. .++.+.+||.... .......+ .....-.++...++++ +++.|+
T Consensus 247 ~~~~~~~g~lyv~GG~---~~~~v~~yd~~t~--~W~~~~~~--~~~R~~~s~~~~~dg~---------iyv~GG~~~~~ 310 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGN---DAKKTSLYDSSSD--SWIPGPDM--QVARGYQSSATMSDGR---------VFTIGGSWSGG 310 (656)
T ss_dssp EEEECTTSCEEEECSS---STTCEEEEEGGGT--EEEECCCC--SSCCSSCEEEECTTSC---------EEEECCCCCSS
T ss_pred cccCCCCCCEEEeCCC---CCCceEEecCcCC--ceeECCCC--CccccccceEEecCCe---------EEEEeCcccCC
Confidence 35554 788888874 2457788776544 33331122 2222234566677888 888876
Q ss_pred ---CeEEEEecCCCCcccee-----eecCCCCCcccCCeeEEEeecCCCCeEEEeeCC---------CcEEEEeCCCccc
Q 038533 99 ---DFLRLWDVGDSSIEPVA-----VLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSID---------TTCTIWDIEKGVV 161 (337)
Q Consensus 99 ---~~v~vw~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d---------g~i~v~d~~~~~~ 161 (337)
+.+.+||..+++...+. .+.... . ...+.. ++..++.|+.+ ..+..||..+...
T Consensus 311 ~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~-----~---~~~~~~-~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w 381 (656)
T 1k3i_A 311 VFEKNGEVYSPSSKTWTSLPNAKVNPMLTAD-----K---QGLYRS-DNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGD 381 (656)
T ss_dssp SCCCCEEEEETTTTEEEEETTSCSGGGCCCC-----T---TGGGTT-TCSCCEEECGGGCEEECCSSSEEEEEECSTTCE
T ss_pred cccccceEeCCCCCcceeCCCcccccccccc-----c---cceeec-CCceEEEECCCCcEEEecCccceeeeecCCcce
Confidence 16899999887433221 011000 0 011112 44555555444 3567888876653
Q ss_pred hhhhhccC---------CceeEEEeC--CCcEEEEEcCCC-----------eEEEEECCCCCCceeeecCCCCCCC-ceE
Q 038533 162 ETQLIAHD---------KEVYDICWG--EARVFASVSADG-----------SVRIFDLRDKEHSTIIYESPQPDTP-LLR 218 (337)
Q Consensus 162 ~~~~~~~~---------~~v~~~~~~--~~~~l~~~~~dg-----------~i~iwd~~~~~~~~~~~~~~~~~~~-i~~ 218 (337)
........ ..-.++.+. ++++++.|+.++ .+.+||..+.......... ..... -.+
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~-mp~~R~~~~ 460 (656)
T 1k3i_A 382 VKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNG-LYFARTFHT 460 (656)
T ss_dssp EEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTC-CSSCCBSCE
T ss_pred eecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCC-CCCCcccCC
Confidence 22211111 122344443 677888887543 6788888776533221001 11122 234
Q ss_pred EEeecCCCcEEEEEEecC----------CEEEEEECCCCC-CCeEEeecccceeeEEEeCCCCCCeEEEEcC
Q 038533 219 LAWNKQDLRYMATILMDS----------NKVVILDIRSPT-LPVAELERHRACVNAIAWAPQSRRHICSVGD 279 (337)
Q Consensus 219 ~~~~~~~~~~l~~~~~d~----------~~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 279 (337)
+...| ++++++.|+.+. ..+.+||..+.. ..+..+...........+.|+++ +++.|+.
T Consensus 461 ~~~l~-~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~-v~v~GG~ 530 (656)
T 1k3i_A 461 SVVLP-DGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGR-VFNGGGG 530 (656)
T ss_dssp EEECT-TSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSC-EEEEECC
T ss_pred eEECC-CCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcE-EEecCCC
Confidence 45556 889999988641 238999987632 01111111112223455678998 8888884
No 284
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.18 E-value=0.0005 Score=61.61 Aligned_cols=72 Identities=14% Similarity=0.118 Sum_probs=47.5
Q ss_pred EEeecCCCCeEEEeeCC----------------CcEEEEeCCCccchhhhhc--cC--------CceeEEEe--CCC---
Q 038533 132 FDWNEIEPKRIGTCSID----------------TTCTIWDIEKGVVETQLIA--HD--------KEVYDICW--GEA--- 180 (337)
Q Consensus 132 ~~~~~~~~~~l~~~~~d----------------g~i~v~d~~~~~~~~~~~~--~~--------~~v~~~~~--~~~--- 180 (337)
+++.+ ...++..+..+ +.|..+|.++++.+-.++. |. .++. +.. .++
T Consensus 246 ~a~d~-~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~ 323 (599)
T 1w6s_A 246 YAYDP-GTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKAR 323 (599)
T ss_dssp CEEET-TTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEE
T ss_pred eeEeC-CCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEE
Confidence 45555 56677766654 3799999999987665542 21 1121 222 134
Q ss_pred cEEEEEcCCCeEEEEECCCCCCcee
Q 038533 181 RVFASVSADGSVRIFDLRDKEHSTI 205 (337)
Q Consensus 181 ~~l~~~~~dg~i~iwd~~~~~~~~~ 205 (337)
..++.++.+|.+.++|.++++....
T Consensus 324 ~~v~~~~~~G~l~~lD~~tG~~lw~ 348 (599)
T 1w6s_A 324 KLLTHPDRNGIVYTLDRTDGALVSA 348 (599)
T ss_dssp EEEEEECTTSEEEEEETTTCCEEEE
T ss_pred EEEEEECCCcEEEEEECCCCCEeec
Confidence 5677889999999999999885543
No 285
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.18 E-value=0.0015 Score=58.34 Aligned_cols=152 Identities=10% Similarity=0.020 Sum_probs=80.2
Q ss_pred EEEEeCC-eEEEEecCCCCccceeeecCCCCCcccCCeeE-EEeecCCCCeEEEeeC------CCcEEEEeCCCccchhh
Q 038533 93 LLASSGD-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTS-FDWNEIEPKRIGTCSI------DTTCTIWDIEKGVVETQ 164 (337)
Q Consensus 93 ~l~~~~~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~l~~~~~------dg~i~v~d~~~~~~~~~ 164 (337)
+++...+ .+..+|..+++ .+.......... ...+.+ .... + ..++++.. ++.|..+|.++++.+.+
T Consensus 118 v~v~~~dg~l~alD~~tG~--~~W~~~~~~~~~-~~~~~~~P~v~--~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 191 (571)
T 2ad6_A 118 IVKKQANGHLLALDAKTGK--INWEVEVCDPKV-GSTLTQAPFVA--K-DTVLMGCSGAELGVRGAVNAFDLKTGELKWR 191 (571)
T ss_dssp EEEECTTSEEEEEETTTCC--EEEEEECCCGGG-TCBCCSCCEEE--T-TEEEEECBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred EEEEeCCCEEEEEECCCCC--EEEEecCCCCCc-cceeccCCEEE--C-CEEEEEecCCccCCCCEEEEEECCCCcEEEE
Confidence 5555456 99999999994 443333211000 001111 1111 3 34555544 78999999999986544
Q ss_pred hhccCCc-------------------------------------e-eEEEeC-CCcEEEEEcCC----------------
Q 038533 165 LIAHDKE-------------------------------------V-YDICWG-EARVFASVSAD---------------- 189 (337)
Q Consensus 165 ~~~~~~~-------------------------------------v-~~~~~~-~~~~l~~~~~d---------------- 189 (337)
+...... + ..++++ ....++.+..+
T Consensus 192 ~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~ 271 (571)
T 2ad6_A 192 AFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWT 271 (571)
T ss_dssp EESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTT
T ss_pred EccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeE
Confidence 3311100 0 123444 34556655532
Q ss_pred CeEEEEECCCCCCceeeecCCC-------CCCCceEEEeecCCCc---EEEEEEecCCEEEEEECCCCCCCeEEe
Q 038533 190 GSVRIFDLRDKEHSTIIYESPQ-------PDTPLLRLAWNKQDLR---YMATILMDSNKVVILDIRSPTLPVAEL 254 (337)
Q Consensus 190 g~i~iwd~~~~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~---~l~~~~~d~~~i~i~d~~~~~~~~~~~ 254 (337)
+.|..+|.++++..-.....+. ...++. +...+ +++ .++.++.++. ++++|.++ ++.+...
T Consensus 272 ~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~-~G~~~~~v~~~~~~G~-l~~lD~~t-G~~~w~~ 342 (571)
T 2ad6_A 272 MTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPV-NGKMTPLLSHIDRNGI-LYTLNREN-GNLIVAE 342 (571)
T ss_dssp TEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEE-TTEEEEEEEEECTTSE-EEEEETTT-CCEEEEE
T ss_pred EEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-Eeccc-CCcEEEEEEEeCCCcE-EEEEECCC-CCEEeee
Confidence 3699999999886544432211 112221 22223 563 5666777777 99999987 4444443
No 286
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.15 E-value=0.0019 Score=52.28 Aligned_cols=231 Identities=10% Similarity=0.128 Sum_probs=144.6
Q ss_pred cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeCCeEEEEecCCCC
Q 038533 31 GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSGDFLRLWDVGDSS 110 (337)
Q Consensus 31 ~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~~~v~vw~~~~~~ 110 (337)
.+.||.-. ...++|++++....... ....+.|.-=+|-.+.. +-......|.-|++....
T Consensus 78 ~~ViALra-----g~~LQiFnletK~klks------~~~~e~VvfWkWis~~~---------L~lVT~taVyHWs~~~~s 137 (365)
T 2xzh_A 78 SKVIALKA-----GKTLQIFNIEMKSKMKA------HTMTDDVTFWKWISLNT---------VALVTDNAVYHWSMEGES 137 (365)
T ss_dssp SSEEEEEE-----TTEEEEEETTTTEEEEE------EECSSCEEEEEECSSSE---------EEEEESSEEEEEESSTTC
T ss_pred ccEEEEec-----CCeEEEechHHhhhhcc------eecCCccEEEEecCCCe---------EEEEcCCcEEEEcccCCC
Confidence 56666655 68899988886553333 34456788888877664 444444599999998643
Q ss_pred ccceeeecCCCCCcccCCeeEEEeecCCCCeEEEee-------CCCcEEEEeCCCccchhhhhccCCceeEEEeC----C
Q 038533 111 IEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCS-------IDTTCTIWDIEKGVVETQLIAHDKEVYDICWG----E 179 (337)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-------~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~----~ 179 (337)
.+.+.+..|..-. ...|..-..++ +.++++..+ -.|.+.+|..+.+ .-+.+.+|......+... +
T Consensus 138 -~P~kvFdR~~~L~-~~QIInY~~d~-~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~ 213 (365)
T 2xzh_A 138 -QPVKMFDRHSSLA-GCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEE 213 (365)
T ss_dssp -CCEEEEECCGGGT-TCEEEEEEECT-TSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEECCTTCSSC
T ss_pred -CCceeeecchhcc-cceEEEEEECC-CCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeeeEEEecCCCCCC
Confidence 6777777765333 24566777777 677665544 2367889998654 345567776666555554 1
Q ss_pred CcEEEEEcC---CCeEEEEECCCC--CC------ceee-ecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCC
Q 038533 180 ARVFASVSA---DGSVRIFDLRDK--EH------STII-YESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSP 247 (337)
Q Consensus 180 ~~~l~~~~~---dg~i~iwd~~~~--~~------~~~~-~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~ 247 (337)
..+|+.+.. .+.+++.++... .. ...+ +.......--.++..++ .-..++..+.-|. |++||+.+
T Consensus 214 ~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~-kygviyviTK~G~-ihlyDleT- 290 (365)
T 2xzh_A 214 STLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISE-KHDVVFLITKYGY-IHLYDLET- 290 (365)
T ss_dssp EEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEET-TTTEEEEEETTSE-EEEEETTT-
T ss_pred ceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecc-cCCEEEEEeCCcE-EEEEEccc-
Confidence 234444433 268999998554 11 1111 11112234456777887 6677777788887 99999999
Q ss_pred CCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCC
Q 038533 248 TLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 248 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 289 (337)
+.++..-+-....|..-+-+.... =++.....|.|.--.++
T Consensus 291 gt~i~~nrIS~d~iF~ta~~~~~~-Gi~~Vnr~GqVl~v~v~ 331 (365)
T 2xzh_A 291 GTCIYMNRISGETIFVTAPHEATA-GIIGVNRKGQVLSVCVE 331 (365)
T ss_dssp CCEEEEEECCSSCEEEEEEEGGGT-EEEEEETTCEEEEEEEC
T ss_pred CcEEEEeccCCCceEEecccCCCC-cEEEEcCCCEEEEEEEC
Confidence 666666555556665555544433 35555577777666666
No 287
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.11 E-value=0.0051 Score=55.60 Aligned_cols=225 Identities=6% Similarity=-0.060 Sum_probs=138.8
Q ss_pred ceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCC
Q 038533 32 QRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDS 109 (337)
Q Consensus 32 ~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~ 109 (337)
.+|+.+. .+.|+..+++........ ....-..+..|+|.+... .++.+-. + .|..+++...
T Consensus 7 ~~Ll~s~-----~~~I~~i~l~~~~~~~~~----~~~~~~~~~~l~~d~~~~--------~lywtD~~~~~I~r~~~~g~ 69 (628)
T 4a0p_A 7 AFLLFSR-----RADIRRISLETNNNNVAI----PLTGVKEASALDFDVTDN--------RIYWTDISLKTISRAFMNGS 69 (628)
T ss_dssp CEEEEEE-----TTEEEEEESSCTTCEEEC----CCCSCSCEEEEEEETTTT--------EEEEEETTTTEEEEEETTSC
T ss_pred cEEEEEe-----CCcEEEEECCCCCcceEE----EcCCCCceEEEEEECCCC--------EEEEEECCCCeEEEEECCCC
Confidence 4555655 788888777754332221 122334578999998766 3555544 3 8988988765
Q ss_pred CccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCceeEEEeCC-CcEEEEEc-
Q 038533 110 SIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGE-ARVFASVS- 187 (337)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~~~~- 187 (337)
.. ...+.... .....+++.+..++++++-...+.|.+.++........+...-....+++++| ...|+...
T Consensus 70 ~~--~~v~~~g~-----~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~ 142 (628)
T 4a0p_A 70 AL--EHVVEFGL-----DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEW 142 (628)
T ss_dssp SC--EEEECSSC-----SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEEC
T ss_pred Cc--EEEEeCCC-----CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCC
Confidence 32 22222211 34567888764566667666778999999865432222223334568899983 44444443
Q ss_pred -CCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeecccceeeEEEe
Q 038533 188 -ADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAW 266 (337)
Q Consensus 188 -~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~ 266 (337)
..+.|...++......... . .-.....+++++ ++..|+.+......|..+|+..... ..+.........+++
T Consensus 143 g~~~~I~r~~~dG~~~~~l~-~---~~~~P~GlalD~-~~~~LY~aD~~~~~I~~~d~dG~~~--~v~~~~l~~P~glav 215 (628)
T 4a0p_A 143 GGKPKIDRAAMDGSERTTLV-P---NVGRANGLTIDY-AKRRLYWTDLDTNLIESSNMLGLNR--EVIADDLPHPFGLTQ 215 (628)
T ss_dssp SSSCEEEEEETTSCSCEEEE-C---SCSSEEEEEEET-TTTEEEEEETTTTEEEEEETTSCSC--EEEEECCSCEEEEEE
T ss_pred CCCCEEEEEeCCCCceEEEE-C---CCCCcceEEEcc-ccCEEEEEECCCCEEEEEcCCCCce--EEeeccCCCceEEEE
Confidence 3567888888766543333 2 235678999998 7777777766665699999875332 334333344567777
Q ss_pred CCCCCCeEEEEcCCCcEEEEeCC
Q 038533 267 APQSRRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 267 ~~~~~~~l~~~~~dg~i~iw~~~ 289 (337)
.. +. ++++-...+.|...|..
T Consensus 216 ~~-~~-ly~tD~~~~~I~~~dk~ 236 (628)
T 4a0p_A 216 YQ-DY-IYWTDWSRRSIERANKT 236 (628)
T ss_dssp ET-TE-EEEEETTTTEEEEEETT
T ss_pred EC-CE-EEEecCCCCEEEEEECC
Confidence 65 33 66666667888888865
No 288
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.10 E-value=0.0068 Score=58.67 Aligned_cols=188 Identities=10% Similarity=0.116 Sum_probs=108.9
Q ss_pred CCeEEEee----------CCCcEEEEeCCCccchhhh-hccCCceeEEEeCCCcEEEEEcCCCeEEEEECCCCCCceeee
Q 038533 139 PKRIGTCS----------IDTTCTIWDIEKGVVETQL-IAHDKEVYDICWGEARVFASVSADGSVRIFDLRDKEHSTIIY 207 (337)
Q Consensus 139 ~~~l~~~~----------~dg~i~v~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 207 (337)
..++++|. ..|.|++|++..++..... ....+++++++--.|.+++..+ ..|++|++...+....-.
T Consensus 844 ~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~~g~Lla~ig--~~l~vy~l~~~~~L~~~~ 921 (1158)
T 3ei3_A 844 NTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASIN--STVRLYEWTTEKELRTEC 921 (1158)
T ss_dssp CCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEETTEEEEEET--TEEEEEEECTTSCEEEEE
T ss_pred CEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeeeCCEEEEEcC--CEEEEEECCCCceEEEEe
Confidence 46888886 4578999998744321111 1346788888766675555443 789999998765333111
Q ss_pred cCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEee--cccceeeEEEeCCCCCCeEEEEcCCCcEEE
Q 038533 208 ESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELE--RHRACVNAIAWAPQSRRHICSVGDDSQAFI 285 (337)
Q Consensus 208 ~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 285 (337)
.. . ..+..+.... .++++++|..-.+ +.++..+.....+..+. .+...++++.+-.++ .++.+..+|.+.+
T Consensus 922 ~~--~-~~i~~~~l~~-~~~~I~vgD~~~S-v~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~--t~l~aD~~gNl~v 994 (1158)
T 3ei3_A 922 NH--Y-NNIMALYLKT-KGDFILVGDLMRS-VLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDD--NFLGAENAFNLFV 994 (1158)
T ss_dssp EE--C-CCSCEEEEEE-ETTEEEEEESSBC-EEEEEEETTTTEEEEEEECCSCBCEEEEEEEETT--EEEEEETTSEEEE
T ss_pred ec--c-ccEEEEEEec-cCCEEEEEEhhhe-EEEEEEEcCCCeEEEEEeecccccEEEEEEEccC--cEEEEcCCCcEEE
Confidence 11 1 1233333333 5788888888777 77766554333333332 234577888887554 6788999999999
Q ss_pred EeCCCCCCCCCCCCCce--eeeeCCCceeEEEE---ccCC---------CceEEEEcCCcEEEE
Q 038533 286 WELPLPPVAGPNGIDPM--SMYSAGSEINQLQW---SPAQ---------PDWLAIAFSNKMQLL 335 (337)
Q Consensus 286 w~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~---~~~~---------~~l~~~~~d~~i~iw 335 (337)
............+.... ..+.....|+++.- .+.+ ..++.++.+|.|-+.
T Consensus 995 l~~~~~~~~~~~~~~L~~~~~fhlG~~vt~~~~~sl~~~~~~~~~~~~~~~il~~T~~GsIg~l 1058 (1158)
T 3ei3_A 995 CQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLV 1058 (1158)
T ss_dssp EEECTTCCSTTGGGBEEEEEEEECSSCEEEEEECCSCCC-------CEEEEEEEEETTSCEEEE
T ss_pred EecCCCCCCccccceeeeEEEEeCCCcEeeEEeeeeecCCCccccccccceEEEEecCCEEEEE
Confidence 98873211111111111 12223556777752 3322 236677788887653
No 289
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.10 E-value=0.0028 Score=52.29 Aligned_cols=233 Identities=9% Similarity=0.028 Sum_probs=122.3
Q ss_pred CCceeEEEEe-cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeCC
Q 038533 21 PYPLYAMAVC-GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSGD 99 (337)
Q Consensus 21 ~~~v~~~~~s-~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~~ 99 (337)
...+.+++|+ +..+++|. .+.|.. -............. ..+...+..|.+.+++. +++.+.+
T Consensus 79 ~~~~~~i~~~~~~~~~~g~-----~g~i~~--S~DgG~tW~~~~~~-~~~~~~~~~i~~~~~~~---------~~~~~~~ 141 (327)
T 2xbg_A 79 DYRFNSVSFQGNEGWIVGE-----PPIMLH--TTDGGQSWSQIPLD-PKLPGSPRLIKALGNGS---------AEMITNV 141 (327)
T ss_dssp CCEEEEEEEETTEEEEEEE-----TTEEEE--ESSTTSSCEECCCC-TTCSSCEEEEEEEETTE---------EEEEETT
T ss_pred CccEEEEEecCCeEEEEEC-----CCeEEE--ECCCCCCceECccc-cCCCCCeEEEEEECCCC---------EEEEeCC
Confidence 3468888888 55555544 664433 44333343331111 12345577888877776 7777765
Q ss_pred -eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEE-EeC--CCccchhhhhccCCceeEE
Q 038533 100 -FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTI-WDI--EKGVVETQLIAHDKEVYDI 175 (337)
Q Consensus 100 -~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v-~d~--~~~~~~~~~~~~~~~v~~~ 175 (337)
.|.. ..+.++ .-........ ..+..+++.+ ++.+++++. +|.+.. .|- .+-+.+. ......+..+
T Consensus 142 g~v~~-S~DgG~-tW~~~~~~~~-----~~~~~~~~~~-~~~~~~~g~-~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~ 210 (327)
T 2xbg_A 142 GAIYR-TKDSGK-NWQALVQEAI-----GVMRNLNRSP-SGEYVAVSS-RGSFYSTWEPGQTAWEPHN--RTTSRRLHNM 210 (327)
T ss_dssp CCEEE-ESSTTS-SEEEEECSCC-----CCEEEEEECT-TSCEEEEET-TSSEEEEECTTCSSCEEEE--CCSSSCEEEE
T ss_pred ccEEE-EcCCCC-CCEEeecCCC-----cceEEEEEcC-CCcEEEEEC-CCcEEEEeCCCCCceeECC--CCCCCcccee
Confidence 4321 222232 1111222333 5688999988 777776665 454443 342 2222221 1234568888
Q ss_pred EeCCCcEEEEEcCCCeEEEEECCCCCCceeeecC-CCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEe
Q 038533 176 CWGEARVFASVSADGSVRIFDLRDKEHSTIIYES-PQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAEL 254 (337)
Q Consensus 176 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~ 254 (337)
.+.+...++.++.+|.+.+.+...++.-..+... ......+.++.+.+ ++.++++ +.++. | ++.... ++.-..+
T Consensus 211 ~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~-~~~~~~~-g~~g~-i-~~S~Dg-G~tW~~~ 285 (327)
T 2xbg_A 211 GFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRT-PNEVWLA-GGAGA-L-LCSQDG-GQTWQQD 285 (327)
T ss_dssp EECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESS-SSCEEEE-ESTTC-E-EEESST-TSSCEEC
T ss_pred EECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecC-CCEEEEE-eCCCe-E-EEeCCC-CcccEEc
Confidence 8884334555666788877642212110111100 01123578899987 6665555 44665 5 333332 3333333
Q ss_pred ec---ccceeeEEEeCCCCCCeEEEEcCCCcEEEEeC
Q 038533 255 ER---HRACVNAIAWAPQSRRHICSVGDDSQAFIWEL 288 (337)
Q Consensus 255 ~~---~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~ 288 (337)
.. ....+.++.|.+++ .+++++.+|.|.-++-
T Consensus 286 ~~~~~~~~~~~~v~~~~~~--~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 286 VDVKKVPSNFYKILFFSPD--QGFILGQKGILLRYVT 320 (327)
T ss_dssp GGGTTSSSCCCEEEEEETT--EEEEECSTTEEEEECC
T ss_pred CccCCCCCCeEEEEEECCC--ceEEEcCCceEEEEcC
Confidence 31 23567888887554 4666677887766553
No 290
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.09 E-value=0.0026 Score=57.01 Aligned_cols=150 Identities=14% Similarity=0.023 Sum_probs=81.5
Q ss_pred EEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeE-EEeecCCCCeEEEee------CCCcEEEEeCCCccchhh
Q 038533 94 LASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTS-FDWNEIEPKRIGTCS------IDTTCTIWDIEKGVVETQ 164 (337)
Q Consensus 94 l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~l~~~~------~dg~i~v~d~~~~~~~~~ 164 (337)
+..++ + .|.-+|..+++ .+.......... ...+.+ -... + ..+++++ .+|.|+.+|.++++.+-.
T Consensus 124 V~v~t~dg~l~AlDa~TG~--~~W~~~~~~~~~-~~~~~ssP~v~--~-g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~ 197 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGE--TVWKVENSDIKV-GSTLTIAPYVV--K-DKVIIGSSGAELGVRGYLTAYDVKTGEQVWR 197 (599)
T ss_dssp EEEECTTSEEEEEETTTCC--EEEEEECCCGGG-TCBCCSCCEEE--T-TEEEECCBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred EEEEcCCCEEEEEECCCCC--EEEeecCCCCCc-cceeecCCEEE--C-CEEEEEecccccCCCCeEEEEECCCCcEEEE
Confidence 44444 6 99999999994 443332211000 001111 1111 3 3455554 379999999999986544
Q ss_pred hhccCCc-------------------------------------e-eEEEeC-CCcEEEEEcCC----------------
Q 038533 165 LIAHDKE-------------------------------------V-YDICWG-EARVFASVSAD---------------- 189 (337)
Q Consensus 165 ~~~~~~~-------------------------------------v-~~~~~~-~~~~l~~~~~d---------------- 189 (337)
+...... + ..+++. ...+++.+..+
T Consensus 198 ~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~ 277 (599)
T 1w6s_A 198 AYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWT 277 (599)
T ss_dssp EESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTS
T ss_pred EcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCcccc
Confidence 3311100 0 123344 35567766655
Q ss_pred CeEEEEECCCCCCceeeecCCCCC--------CCceEEEee-cCCC---cEEEEEEecCCEEEEEECCCCCCCeEEe
Q 038533 190 GSVRIFDLRDKEHSTIIYESPQPD--------TPLLRLAWN-KQDL---RYMATILMDSNKVVILDIRSPTLPVAEL 254 (337)
Q Consensus 190 g~i~iwd~~~~~~~~~~~~~~~~~--------~~i~~~~~~-~~~~---~~l~~~~~d~~~i~i~d~~~~~~~~~~~ 254 (337)
+.|..+|.++++..-..... .|. .++. +... . ++ ..++.++.++. ++++|.++ ++++...
T Consensus 278 ~sv~Ald~~TG~~~W~~q~~-~~d~wd~d~~~~p~l-~d~~~~-~G~~~~~v~~~~~~G~-l~~lD~~t-G~~lw~~ 349 (599)
T 1w6s_A 278 MTIFGRDADTGEAKFGYQKT-PHDEWDYAGVNVMML-SEQKDK-DGKARKLLTHPDRNGI-VYTLDRTD-GALVSAN 349 (599)
T ss_dssp SEEEEEETTTCCEEEEEESS-TTCSSCCCCCCCCEE-EEEECT-TSCEEEEEEEECTTSE-EEEEETTT-CCEEEEE
T ss_pred ceEEEEeCCCCceeeEeecC-CCccccccCCCccEE-Eecccc-CCcEEEEEEEECCCcE-EEEEECCC-CCEeecc
Confidence 37999999999865444332 221 1121 2222 2 56 45666777877 99999988 5545433
No 291
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.05 E-value=0.004 Score=52.50 Aligned_cols=230 Identities=11% Similarity=0.128 Sum_probs=148.0
Q ss_pred cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeCC-eEEEEecCCC
Q 038533 31 GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSGD-FLRLWDVGDS 109 (337)
Q Consensus 31 ~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~~-~v~vw~~~~~ 109 (337)
.+.||.-. ...++|++++....... ....+.|.-=+|-.+. .|+--.+ .|.-|++...
T Consensus 77 ~~iiALra-----g~~lQiFnle~K~klks------~~~~e~VvfWkWis~~----------~l~lVT~taVyHWsi~~~ 135 (494)
T 1bpo_A 77 SKVIALKA-----GKTLQIFNIEMKSKMKA------HTMTDDVTFWKWISLN----------TVALVTDNAVYHWSMEGE 135 (494)
T ss_dssp SSCEEEEE-----TTEEEEEETTTTEEEEE------EECSSCCCEEEEEETT----------EEEEECSSEEEEEESSSS
T ss_pred CcEEEEec-----CCeEEEEchHHhhhhcc------eecCCCceEEEecCCC----------eEEEEcCCeeEEecccCC
Confidence 55666655 78999988876553332 3445678888887666 5555555 9999999764
Q ss_pred CccceeeecCCCCCcccCCeeEEEeecCCCCeEEEee-------CCCcEEEEeCCCccchhhhhccCCceeEEEeC----
Q 038533 110 SIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCS-------IDTTCTIWDIEKGVVETQLIAHDKEVYDICWG---- 178 (337)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-------~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~---- 178 (337)
. .+.+.+..|..-. ...|..-..++ +.++++..+ -.|.+.+|..+.+ .-+.+.+|......+...
T Consensus 136 s-~P~kvFdR~~~L~-~~QIInY~~d~-~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~ 211 (494)
T 1bpo_A 136 S-QPVKMFDRHSSLA-GCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAE 211 (494)
T ss_dssp C-CCEEEEECCGGGT-TCEEEEEEECT-TSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECTTCSS
T ss_pred C-Cchhheecchhcc-cceEEEEEECC-CCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecCCCCC
Confidence 3 6777777765333 24676777777 777666543 2477899998654 345667787766666655
Q ss_pred CCcEEEEEcCC---CeEEEEECCCCC--C------ceee-ecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCC
Q 038533 179 EARVFASVSAD---GSVRIFDLRDKE--H------STII-YESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRS 246 (337)
Q Consensus 179 ~~~~l~~~~~d---g~i~iwd~~~~~--~------~~~~-~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~ 246 (337)
+..++..+... +.+++.++.... . ...+ +.......--.++..++ .-..++..+.-|. |++||+.+
T Consensus 212 ~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~-kygviyviTK~G~-i~lyDleT 289 (494)
T 1bpo_A 212 ESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISE-KHDVVFLITKYGY-IHLYDLET 289 (494)
T ss_dssp EEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEET-TTTEEEEEETTSE-EEEEETTT
T ss_pred CceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecc-cCCEEEEEecCce-EEEEeccc
Confidence 13455555543 789999986541 0 1111 11112234456788887 6677777888887 99999999
Q ss_pred CCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCC
Q 038533 247 PTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 247 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 289 (337)
+.++..-+-....|..-+-+.... =++.....|.|.--.++
T Consensus 290 -gt~i~~nrIs~~~iF~t~~~~~~~-Gi~~Vnr~GqVl~v~v~ 330 (494)
T 1bpo_A 290 -GTCIYMNRISGETIFVTAPHEATA-GIIGVNRKGQVLSVCVE 330 (494)
T ss_dssp -CCEEEEEECCSSCEEEEEEETTTT-EEEEEETTCEEEEEEEC
T ss_pred -ceeeeeecccCCceEEecccCCCC-cEEEEccCceEEEEEEc
Confidence 666666555556666555554444 45555577777666666
No 292
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.05 E-value=0.00068 Score=55.71 Aligned_cols=189 Identities=7% Similarity=0.118 Sum_probs=113.2
Q ss_pred CCeEEEeeCCCcEEEEeCCCccchhhhhccCCceeEEEeCC-----Cc---EEE-EEcC--CCeEEEEECC--CCCCcee
Q 038533 139 PKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGE-----AR---VFA-SVSA--DGSVRIFDLR--DKEHSTI 205 (337)
Q Consensus 139 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~-----~~---~l~-~~~~--dg~i~iwd~~--~~~~~~~ 205 (337)
..+++.....+-+.+||+ +++.+..+.. +.++.+..-+ ++ +++ +.-. +++|.+|++. +.. ...
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~ 115 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQS 115 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEE
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eee
Confidence 456777777889999999 8887777653 4566665543 22 223 3333 5789999774 332 222
Q ss_pred eecC--C--CCCCCceEEEe--ecCCCc-EEEEEEecCCEEEEEECCCC------CCCeEEeecccceeeEEEeCCCCCC
Q 038533 206 IYES--P--QPDTPLLRLAW--NKQDLR-YMATILMDSNKVVILDIRSP------TLPVAELERHRACVNAIAWAPQSRR 272 (337)
Q Consensus 206 ~~~~--~--~~~~~i~~~~~--~~~~~~-~l~~~~~d~~~i~i~d~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~ 272 (337)
+... + .....++.+++ +|..+. ++++...++. +..|++... .+.++++.. ...+..+...+...
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~-~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g- 192 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGE-FEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYG- 192 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSE-EEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTT-
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCe-EEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCC-
Confidence 2110 1 11145667777 664454 6777777776 999888431 234555553 35677888888777
Q ss_pred eEEEEcCCCcEEEEeCCCCCCCCCCCCCceeee--eC-CCceeEEEE--ccCCC-ceEEEE-cCCcEEEEeC
Q 038533 273 HICSVGDDSQAFIWELPLPPVAGPNGIDPMSMY--SA-GSEINQLQW--SPAQP-DWLAIA-FSNKMQLLKV 337 (337)
Q Consensus 273 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~--~~-~~~v~~~~~--~~~~~-~l~~~~-~d~~i~iw~l 337 (337)
.|+.+-++..|..++.+...... . ...... ++ ...+..|+. .++++ +|++++ .++++.+|+.
T Consensus 193 ~Lyv~eEd~GIw~~da~p~~~~~--~-~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr 261 (355)
T 3amr_A 193 RLYIAEEDEAIWKFSAEPDGGSN--G-TVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDR 261 (355)
T ss_dssp EEEEEETTTEEEEEECSTTSCSC--C-EEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEES
T ss_pred eEEEecccceEEEEeCCcCCCCC--c-eEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEEC
Confidence 89999988666555544211111 0 111121 11 246788887 45555 677777 5678888863
No 293
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.00 E-value=0.0048 Score=51.50 Aligned_cols=233 Identities=11% Similarity=0.074 Sum_probs=118.5
Q ss_pred CCeEEEecCCCCcccCcCCccEEEEeCC-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCC----CCeEEEee
Q 038533 72 PPTKLMFDPNSSSRKSSSNRHLLASSGD-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIE----PKRIGTCS 146 (337)
Q Consensus 72 ~i~~i~~~~~~~~~~~~~~~~~l~~~~~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~l~~~~ 146 (337)
....++|.|++. ++++-.+ .|.+++ +++...+..+... ..-......++|+| + +.++++-.
T Consensus 32 ~P~~ia~~pdG~---------l~V~e~~g~I~~i~--~g~~~~~~~~~v~--~~g~~~p~gia~~p-df~~~g~lYv~~~ 97 (352)
T 2ism_A 32 VPWALAFLPDGG---------MLIAERPGRIRLFR--EGRLSTYAELSVY--HRGESGLLGLALHP-RFPQEPYVYAYRT 97 (352)
T ss_dssp CEEEEEECTTSC---------EEEEETTTEEEEEE--TTEEEEEEECCCC--CSTTCSEEEEEECT-TTTTSCEEEEEEE
T ss_pred CceEEEEcCCCe---------EEEEeCCCeEEEEE--CCCccEeecceEe--ecCCCCceeEEECC-CCCCCCEEEEEEe
Confidence 457999999998 8888765 888888 4432222222200 00015678999998 6 34444433
Q ss_pred CC-----CcEEEEeCCCcc-----ch-hhhh---ccCCceeEEEeC-CCcEEEEEcC-------------CCeEEEEECC
Q 038533 147 ID-----TTCTIWDIEKGV-----VE-TQLI---AHDKEVYDICWG-EARVFASVSA-------------DGSVRIFDLR 198 (337)
Q Consensus 147 ~d-----g~i~v~d~~~~~-----~~-~~~~---~~~~~v~~~~~~-~~~~l~~~~~-------------dg~i~iwd~~ 198 (337)
.. +.|..++...+. .+ ..+. ........++|. ++.++++.+. .|.|.-+|..
T Consensus 98 ~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~d 177 (352)
T 2ism_A 98 VAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPE 177 (352)
T ss_dssp ECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTT
T ss_pred cCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCC
Confidence 32 568888776431 11 1122 111123678998 6655555332 2456666654
Q ss_pred CC------------CCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEE------EEEECCCCC------------
Q 038533 199 DK------------EHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKV------VILDIRSPT------------ 248 (337)
Q Consensus 199 ~~------------~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i------~i~d~~~~~------------ 248 (337)
.. ......... + .....++|+|.++.++++ ......+ .+.-+....
T Consensus 178 G~~p~~npf~~~~~~~~~i~a~G--~-rnp~g~a~d~~~g~l~v~-d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~ 253 (352)
T 2ism_A 178 GEPAPGNPFLGRRGARPEVYSLG--H-RNPQGLAWHPKTGELFSS-EHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGN 253 (352)
T ss_dssp SSBCTTCTTTTCTTSCTTEEEEC--C-SEECCCEECTTTCCEEEE-EECC------CCCEEEEECTTCBCCTTTCCSCCC
T ss_pred CCCCCCCcccCCCCCCccEEEEc--C-CCcccEEEECCCCCEEEE-EcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCC
Confidence 31 001111111 1 235678898844454443 3322211 122222211
Q ss_pred -----CCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCC-CCCceeeeeCCCceeEEEEccCCCc
Q 038533 249 -----LPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPN-GIDPMSMYSAGSEINQLQWSPAQPD 322 (337)
Q Consensus 249 -----~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~ 322 (337)
.++..+..| .....++| .+|. ++++.-..+.|...+++ ...... ......+.....++.++++.|||..
T Consensus 254 ~~~~~~p~~~~~~~-~ap~G~~~-~~G~-l~v~~~~~~~v~~v~~~--~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~l 328 (352)
T 2ism_A 254 DPRYRDPLYFWPQG-FPPGNLAF-FRGD-LYVAGLRGQALLRLVLE--GERGRWRVLRVETALSGFGRLREVQVGPDGAL 328 (352)
T ss_dssp CTTSCCCSEECTTC-CCEEEEEE-ETTE-EEEEETTTTEEEEEEEE--EETTEEEEEEEEEEEESSCCEEEEEECTTSCE
T ss_pred CCCCcCCeEecCCC-CCCcceEE-ECCE-EEEEECCCCEEEEEEEC--CCCcceeecchheecccCCCeeEEEECCCCcE
Confidence 233333222 34567777 4565 66666667778777776 211000 0001122233467899999999976
Q ss_pred eEEEE
Q 038533 323 WLAIA 327 (337)
Q Consensus 323 l~~~~ 327 (337)
+++..
T Consensus 329 yv~~~ 333 (352)
T 2ism_A 329 YVTTS 333 (352)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 66554
No 294
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.99 E-value=0.00015 Score=66.39 Aligned_cols=197 Identities=8% Similarity=-0.074 Sum_probs=111.3
Q ss_pred CCCeEEEecCCCCcccCcCCccEEEEeC--C-eEEEEecCCCC--ccceeeecCCCCCcccCCeeEEEeecCCCCeEEEe
Q 038533 71 YPPTKLMFDPNSSSRKSSSNRHLLASSG--D-FLRLWDVGDSS--IEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTC 145 (337)
Q Consensus 71 ~~i~~i~~~~~~~~~~~~~~~~~l~~~~--~-~v~vw~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 145 (337)
..+..|+|.+... .|..+. . .|+.+++.+.. ......+...- .....|++.+..++++++-
T Consensus 406 ~~p~gla~d~~~~---------~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~-----~~P~glavD~~~g~LY~tD 471 (699)
T 1n7d_A 406 RNVVALDTEVASN---------RIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI-----QAPDGLAVDWIHSNIYWTD 471 (699)
T ss_dssp TTCCCCEEETTTT---------EEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC-------CCCEECCCSSSBCEECC
T ss_pred cceEEEccccccC---------eEEEEecCCCeEEEEecCCCCCCcceEEEEeCCC-----CCcceEEEEeeCCcEEEEe
Confidence 4567899998766 444433 3 89999887510 01111121111 2345677775356666666
Q ss_pred eCCCcEEEEeCCCccchhhhhccCCceeEEEeC-CCcEEEEEc-CC-CeEEEEECCCCCCceeeecCCCCCCCceEEEee
Q 038533 146 SIDTTCTIWDIEKGVVETQLIAHDKEVYDICWG-EARVFASVS-AD-GSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWN 222 (337)
Q Consensus 146 ~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~-~d-g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~ 222 (337)
...+.|.++++........+.........++++ .+..|+.+. .. +.|..+++.......... . .-.....|+|+
T Consensus 472 ~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~-~--~l~~PnGlavd 548 (699)
T 1n7d_A 472 SVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT-E--NIQWPNGITLD 548 (699)
T ss_dssp TTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESC-S--SCSSCCCEEEC
T ss_pred ccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEe-C--CCCCccEEEEe
Confidence 667899999986554322222223456788888 344444433 22 678888776543222211 1 12345789999
Q ss_pred cCCCcEEEEEEecCCEEEEEECCCCCCCeEEeec---ccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCC
Q 038533 223 KQDLRYMATILMDSNKVVILDIRSPTLPVAELER---HRACVNAIAWAPQSRRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 223 ~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 289 (337)
| ++..|+.+......|..+|+.. .. ...+.. .......|++..+ . ++++....+.|..++..
T Consensus 549 ~-~~~~LY~aD~~~~~I~~~d~dG-~~-~~~~~~~~~~~~~P~glavd~~-~-lywtd~~~~~V~~~d~~ 613 (699)
T 1n7d_A 549 L-LSGRLYWVDSKLHSISSIDVNG-GN-RKTILEDEKRLAHPFSLAVFED-K-VFWTDIINEAIFSANRL 613 (699)
T ss_dssp T-TTCCEEEEETTTTEEEEECSSS-SC-CEEECCCSSSCSSCCCCEEETT-E-EEEECSTTTCEEEEETT
T ss_pred c-cCCEEEEEecCCCeEEEEccCC-Cc-eEEEEecCCcCCCceEeEEECC-E-EEEEeCCCCeEEEEEcc
Confidence 8 6565655555554599999864 22 222221 1123345566543 3 66666677889888865
No 295
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.97 E-value=0.0034 Score=51.18 Aligned_cols=208 Identities=8% Similarity=0.078 Sum_probs=121.8
Q ss_pred CCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCC-CcccCCeeEEEe---ecCCCCeEE
Q 038533 70 PYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKS-SEFCAPLTSFDW---NEIEPKRIG 143 (337)
Q Consensus 70 ~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~---~~~~~~~l~ 143 (337)
.....+++|.+... .++++.- . +|..|+...+..... .+.+-.. ..-...+..+.| .| ++.+++
T Consensus 12 ~~yPE~~~wd~~~g--------~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~-~grL~v 81 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQ--------VFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDN-SKRLFA 81 (334)
T ss_dssp TCCCSCEEEETTTT--------EEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSS-CCEEEE
T ss_pred ccCCcCccCcCCCC--------EEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCC-CCcEEE
Confidence 33456789987655 2555553 4 999999986633322 3332100 000124679999 57 666776
Q ss_pred Eee-------------CCCcEEEEeCC---Cccchhhhh------c-------cCCceeEEEeC-CCcEEEEEcCC-CeE
Q 038533 144 TCS-------------IDTTCTIWDIE---KGVVETQLI------A-------HDKEVYDICWG-EARVFASVSAD-GSV 192 (337)
Q Consensus 144 ~~~-------------~dg~i~v~d~~---~~~~~~~~~------~-------~~~~v~~~~~~-~~~~l~~~~~d-g~i 192 (337)
+.. .+..|..+|+. +++.+.... + -......++.. +|+..++++.. +.|
T Consensus 82 v~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I 161 (334)
T 2p9w_A 82 VMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAI 161 (334)
T ss_dssp EEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEE
T ss_pred EEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeE
Confidence 544 26789999998 776543221 1 11347889999 79999988888 887
Q ss_pred EEEECCCCCCceeeecC--CCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCC-CeEEee-cc---cceeeEE-
Q 038533 193 RIFDLRDKEHSTIIYES--PQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTL-PVAELE-RH---RACVNAI- 264 (337)
Q Consensus 193 ~iwd~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~-~~~~~~-~~---~~~v~~~- 264 (337)
...+............. .......+.++++| +++.|++....+. |..+|++.+.. ++..-. +. -.....+
T Consensus 162 ~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~p-dg~~Liv~~~~g~-L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgil 239 (334)
T 2p9w_A 162 ARVSADGKTVSTFAWESGNGGQRPGYSGITFDP-HSNKLIAFGGPRA-LTAFDVSKPYAWPEPVKINGDFGTLSGTEKIV 239 (334)
T ss_dssp EEECTTSCCEEEEEECCCCSSSCCSCSEEEEET-TTTEEEEESSSSS-EEEEECSSSSCCCEECEESSCCCCCTTEEEEE
T ss_pred EEEeCCCCEEeeeeecCCCcccccCcceEEEeC-CCCEEEEEcCCCe-EEEEcCCCCcceeecccccCCcccccCccccc
Confidence 77777654322221111 11223467999999 8888888877776 99999985332 121110 11 1122332
Q ss_pred EeCCCCCCeEEEEcCCCcEEEEeCC
Q 038533 265 AWAPQSRRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 265 ~~~~~~~~~l~~~~~dg~i~iw~~~ 289 (337)
.--.+|+-+|++.+..+.+.+.+.+
T Consensus 240 p~~~~G~vllV~~~~~~~~~l~S~D 264 (334)
T 2p9w_A 240 TVPVGNESVLVGARAPYAISFRSWD 264 (334)
T ss_dssp EEEETTEEEEEEEETTEEEEEECSS
T ss_pred ccccCCEEEEEEcCCCCEEEEECCC
Confidence 3334566235566566666666655
No 296
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.95 E-value=0.0056 Score=50.51 Aligned_cols=272 Identities=7% Similarity=-0.026 Sum_probs=137.6
Q ss_pred CCCceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEe
Q 038533 20 SPYPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASS 97 (337)
Q Consensus 20 ~~~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~ 97 (337)
....+.++.|. +..+|+|. .|.| |......................+.+|.|.+ +. .++.+
T Consensus 34 ~~~~~~~v~~~~~~~~~~~G~-----~g~i--~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~---------~~~~g 96 (327)
T 2xbg_A 34 TTATILDMSFIDRHHGWLVGV-----NATL--METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NE---------GWIVG 96 (327)
T ss_dssp CSSCEEEEEESSSSCEEEEET-----TTEE--EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TE---------EEEEE
T ss_pred CCCcEEEEEECCCCcEEEEcC-----CCeE--EEeCCCCCCCeECCCCCCCCCccEEEEEecC-Ce---------EEEEE
Confidence 34679999997 55666554 6754 3333333333321110012244688999976 44 55655
Q ss_pred CC-eEEEEecCCCC-ccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhh-hccCCceeE
Q 038533 98 GD-FLRLWDVGDSS-IEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQL-IAHDKEVYD 174 (337)
Q Consensus 98 ~~-~v~vw~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~-~~~~~~v~~ 174 (337)
.. .|.. ..+.++ .+.+.....+. ..+..+.+.+ ++..++++ .+|.|..- ...++.-... ......+..
T Consensus 97 ~~g~i~~-S~DgG~tW~~~~~~~~~~-----~~~~~i~~~~-~~~~~~~~-~~g~v~~S-~DgG~tW~~~~~~~~~~~~~ 167 (327)
T 2xbg_A 97 EPPIMLH-TTDGGQSWSQIPLDPKLP-----GSPRLIKALG-NGSAEMIT-NVGAIYRT-KDSGKNWQALVQEAIGVMRN 167 (327)
T ss_dssp ETTEEEE-ESSTTSSCEECCCCTTCS-----SCEEEEEEEE-TTEEEEEE-TTCCEEEE-SSTTSSEEEEECSCCCCEEE
T ss_pred CCCeEEE-ECCCCCCceECccccCCC-----CCeEEEEEEC-CCCEEEEe-CCccEEEE-cCCCCCCEEeecCCCcceEE
Confidence 44 4332 333332 11111111111 3467787765 55656555 45654321 1223322211 234456888
Q ss_pred EEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEE
Q 038533 175 ICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAE 253 (337)
Q Consensus 175 ~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~ 253 (337)
+++. ++.+++.+...+..+-.|-. +..-..+.. .....+..+.+.+ ++..+ .++.++. +++.+... +.....
T Consensus 168 ~~~~~~~~~~~~g~~G~~~~S~d~g-G~tW~~~~~--~~~~~~~~~~~~~-~g~~~-~~~~~G~-~~~s~~D~-G~tW~~ 240 (327)
T 2xbg_A 168 LNRSPSGEYVAVSSRGSFYSTWEPG-QTAWEPHNR--TTSRRLHNMGFTP-DGRLW-MIVNGGK-IAFSDPDN-SENWGE 240 (327)
T ss_dssp EEECTTSCEEEEETTSSEEEEECTT-CSSCEEEEC--CSSSCEEEEEECT-TSCEE-EEETTTE-EEEEETTE-EEEECC
T ss_pred EEEcCCCcEEEEECCCcEEEEeCCC-CCceeECCC--CCCCccceeEECC-CCCEE-EEeCCce-EEEecCCC-CCeeEe
Confidence 9998 56666655444333334421 121112211 2345788899887 66655 4455665 66663211 111111
Q ss_pred ee----cccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeee---eCCCceeEEEEccCCCceEEE
Q 038533 254 LE----RHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMY---SAGSEINQLQWSPAQPDWLAI 326 (337)
Q Consensus 254 ~~----~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~ 326 (337)
+. .+...+.++.+.+++. +++++. +|.| ++..+.+. .-.... .....+.++.|.+++ .++++
T Consensus 241 ~~~~~~~~~~~~~~v~~~~~~~-~~~~g~-~g~i-~~S~DgG~-------tW~~~~~~~~~~~~~~~v~~~~~~-~~~~~ 309 (327)
T 2xbg_A 241 LLSPLRRNSVGFLDLAYRTPNE-VWLAGG-AGAL-LCSQDGGQ-------TWQQDVDVKKVPSNFYKILFFSPD-QGFIL 309 (327)
T ss_dssp CBCTTSSCCSCEEEEEESSSSC-EEEEES-TTCE-EEESSTTS-------SCEECGGGTTSSSCCCEEEEEETT-EEEEE
T ss_pred ccCCcccCCcceEEEEecCCCE-EEEEeC-CCeE-EEeCCCCc-------ccEEcCccCCCCCCeEEEEEECCC-ceEEE
Confidence 11 1223578899998776 666655 6766 34444111 011111 123567889998665 47888
Q ss_pred EcCCcEEEE
Q 038533 327 AFSNKMQLL 335 (337)
Q Consensus 327 ~~d~~i~iw 335 (337)
+.+|.|.-+
T Consensus 310 G~~G~i~~~ 318 (327)
T 2xbg_A 310 GQKGILLRY 318 (327)
T ss_dssp CSTTEEEEE
T ss_pred cCCceEEEE
Confidence 888877654
No 297
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.90 E-value=0.0014 Score=53.46 Aligned_cols=156 Identities=10% Similarity=0.124 Sum_probs=97.0
Q ss_pred CceeEEEeC-C-CcEEEEEcCCCeEEEEECCCCCCceeeecCC----CCCCCceEEEe---ecCCCcEEEEEEe------
Q 038533 170 KEVYDICWG-E-ARVFASVSADGSVRIFDLRDKEHSTIIYESP----QPDTPLLRLAW---NKQDLRYMATILM------ 234 (337)
Q Consensus 170 ~~v~~~~~~-~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~----~~~~~i~~~~~---~~~~~~~l~~~~~------ 234 (337)
....+++|+ . +.++++.-..++|..||...+.......... ........+.| .| +++++++...
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~-~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDN-SKRLFAVMKNAKSFNF 91 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSS-CCEEEEEEEETTTTCT
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCC-CCcEEEEEcccccccc
Confidence 345678998 3 4445555579999999997554332222110 01123578999 68 6777775432
Q ss_pred -------cCCEEEEEECC---CCCCCeEEee--cc-----------cceeeEEEeCCCCCCeEEEEcCC-CcEEEEeCCC
Q 038533 235 -------DSNKVVILDIR---SPTLPVAELE--RH-----------RACVNAIAWAPQSRRHICSVGDD-SQAFIWELPL 290 (337)
Q Consensus 235 -------d~~~i~i~d~~---~~~~~~~~~~--~~-----------~~~v~~~~~~~~~~~~l~~~~~d-g~i~iw~~~~ 290 (337)
+.. |..||+. + ++.+.... .. ......++..++|+ ..++++.- +.|...+..
T Consensus 92 ~g~~~~g~~~-v~~~Dl~~~~t-g~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn-aYVt~s~~~~~I~rV~pd- 167 (334)
T 2p9w_A 92 ADQSSHGASS-FHSFNLPLSEN-SKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN-SYVAFALGMPAIARVSAD- 167 (334)
T ss_dssp TSCCSSSCCE-EEEEESSCCTT-CCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC-EEEEEEESSCEEEEECTT-
T ss_pred cccccCCCCE-EEEEcCCcCCC-CCEEEEecCccccccccccccccccCCceeEECCCCC-EEEeCCCCCCeEEEEeCC-
Confidence 344 9999998 5 33443332 11 12578999999999 77777766 665555544
Q ss_pred CCCCCCCCCCceeeee------CCCceeEEEEccCCCceEEEEcCCcEEEEeC
Q 038533 291 PPVAGPNGIDPMSMYS------AGSEINQLQWSPAQPDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 291 ~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~l 337 (337)
. ........ .....+.++++|++..|++...++.|..+++
T Consensus 168 -G------~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~ 213 (334)
T 2p9w_A 168 -G------KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDV 213 (334)
T ss_dssp -S------CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEEC
T ss_pred -C------CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcC
Confidence 1 11111111 1223679999999988888767888887764
No 298
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.88 E-value=0.013 Score=52.46 Aligned_cols=61 Identities=11% Similarity=0.029 Sum_probs=36.5
Q ss_pred CeEEEEECCCCCCceeeecCCCCC--------CCceEEEeecCCC---cEEEEEEecCCEEEEEECCCCCCCeEEe
Q 038533 190 GSVRIFDLRDKEHSTIIYESPQPD--------TPLLRLAWNKQDL---RYMATILMDSNKVVILDIRSPTLPVAEL 254 (337)
Q Consensus 190 g~i~iwd~~~~~~~~~~~~~~~~~--------~~i~~~~~~~~~~---~~l~~~~~d~~~i~i~d~~~~~~~~~~~ 254 (337)
+.|..+|.++++..-..... .|. .++. +.....++ ..++.++.++. ++++|.++ ++++...
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~-~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~-l~~lD~~t-G~~lw~~ 362 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHT-PNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGF-FYVVDRSN-GKLQNAF 362 (582)
T ss_dssp SEEEEECTTTCCEEEEEESS-TTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSE-EEEEETTT-CCEEEEE
T ss_pred ceEEEEeCCCCCEEEEEeCC-CCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCce-EEEEECCC-CCEeccc
Confidence 68999999999865544332 121 1111 12210155 36777888887 99999987 5445443
No 299
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.81 E-value=0.0045 Score=53.24 Aligned_cols=155 Identities=6% Similarity=-0.007 Sum_probs=86.9
Q ss_pred CeeEEEeecC-CCCeEEEeeCCCcEEEEeCCCccchhhhhccCCceeEEEeC-CCcEEEEEcCC---C-eEEEEECCCCC
Q 038533 128 PLTSFDWNEI-EPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWG-EARVFASVSAD---G-SVRIFDLRDKE 201 (337)
Q Consensus 128 ~i~~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d---g-~i~iwd~~~~~ 201 (337)
....++|+|. +...|..+...+.|+.+|+.+++..... ........++++ +++++++.... . .+...+.....
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee-cCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe
Confidence 4568999872 1344444444489999999777644333 244568899999 67744443321 1 23333332221
Q ss_pred Cc-eeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEe-ec-ccceeeEEEeCCCCCCeEEEEc
Q 038533 202 HS-TIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAEL-ER-HRACVNAIAWAPQSRRHICSVG 278 (337)
Q Consensus 202 ~~-~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~-~~-~~~~v~~~~~~~~~~~~l~~~~ 278 (337)
.. ..+.. -.....++++| ....|+.+......|+.+|..+ +.....+ .. .......++|+|+++.++++-.
T Consensus 219 ~~~~~~~~----~~~P~giavd~-~~G~lyv~d~~~~~V~~~d~~~-g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~ 292 (433)
T 4hw6_A 219 TERLSLCN----ARGAKTCAVHP-QNGKIYYTRYHHAMISSYDPAT-GTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYN 292 (433)
T ss_dssp CCEEEEEE----CSSBCCCEECT-TTCCEEECBTTCSEEEEECTTT-CCEEEEEEECSCCSSCEEEEECTTSSEEEEEET
T ss_pred eccccccc----cCCCCEEEEeC-CCCeEEEEECCCCEEEEEECCC-CeEEEEEeccCCCCCcccEEEeCCCCEEEEEeC
Confidence 11 11111 13456788888 4444554444444499999875 3221222 11 1122346999999983455555
Q ss_pred CCCcEEEEeCC
Q 038533 279 DDSQAFIWELP 289 (337)
Q Consensus 279 ~dg~i~iw~~~ 289 (337)
..+.|+.++..
T Consensus 293 ~~~~I~~~~~d 303 (433)
T 4hw6_A 293 GKHCIYRVDYN 303 (433)
T ss_dssp TTTEEEEEEBC
T ss_pred CCCEEEEEeCC
Confidence 67889998876
No 300
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.75 E-value=0.0063 Score=49.44 Aligned_cols=179 Identities=13% Similarity=0.091 Sum_probs=93.1
Q ss_pred EEEEeC-C------eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCC-----cEEEEeCCCcc
Q 038533 93 LLASSG-D------FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDT-----TCTIWDIEKGV 160 (337)
Q Consensus 93 ~l~~~~-~------~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg-----~i~v~d~~~~~ 160 (337)
+++.|+ + .+.+||..+.+...+..+.... ..-..+.+ ++.+++.|+.++ .+.+||+.+.+
T Consensus 64 lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-----~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~d~~~~~ 135 (302)
T 2xn4_A 64 VFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRR-----STLGAAVL---NGLLYAVGGFDGSTGLSSVEAYNIKSNE 135 (302)
T ss_dssp EEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCC-----BSCEEEEE---TTEEEEEEEECSSCEEEEEEEEETTTTE
T ss_pred EEEEeCcCCCccccceEEECCCCCceeeCCCCCccc-----cceEEEEE---CCEEEEEcCCCCCccCceEEEEeCCCCe
Confidence 777765 1 6889999887654444333221 22222222 567888887654 57788887665
Q ss_pred c--hhhhhccCCceeEEEeCCCcEEEEEcCC-------CeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEE
Q 038533 161 V--ETQLIAHDKEVYDICWGEARVFASVSAD-------GSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMAT 231 (337)
Q Consensus 161 ~--~~~~~~~~~~v~~~~~~~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 231 (337)
- +..+.. ...-.+++..++++++.|+.+ ..+.+||+.+.+-.... ..+........+.+ ++.+++.
T Consensus 136 W~~~~~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~---~~~iyv~ 210 (302)
T 2xn4_A 136 WFHVAPMNT-RRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIA-EMSTRRSGAGVGVL---NNLLYAV 210 (302)
T ss_dssp EEEECCCSS-CCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEEC-CCSSCCBSCEEEEE---TTEEEEE
T ss_pred EeecCCCCC-cccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECC-CCccccccccEEEE---CCEEEEE
Confidence 2 111211 111122222356777777643 35889999876533221 11111122222222 6777777
Q ss_pred EEecC----CEEEEEECCCCCCCeEEeecc---cceeeEEEeCCCCCCeEEEEcCCC-----cEEEEeCC
Q 038533 232 ILMDS----NKVVILDIRSPTLPVAELERH---RACVNAIAWAPQSRRHICSVGDDS-----QAFIWELP 289 (337)
Q Consensus 232 ~~~d~----~~i~i~d~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~l~~~~~dg-----~i~iw~~~ 289 (337)
|+.++ ..+.+||+.+.. -..+... ......+.+ ++. +++.|+.++ .+.+||..
T Consensus 211 GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd~~ 275 (302)
T 2xn4_A 211 GGHDGPLVRKSVEVYDPTTNA--WRQVADMNMCRRNAGVCAV--NGL-LYVVGGDDGSCNLASVEYYNPT 275 (302)
T ss_dssp CCBSSSSBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEEE--TTE-EEEECCBCSSSBCCCEEEEETT
T ss_pred CCCCCCcccceEEEEeCCCCC--EeeCCCCCCccccCeEEEE--CCE-EEEECCcCCCcccccEEEEcCC
Confidence 77653 138999987632 1222111 111112222 455 777777553 47888887
No 301
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.74 E-value=0.0089 Score=48.65 Aligned_cols=181 Identities=10% Similarity=0.063 Sum_probs=94.6
Q ss_pred EEEEeC------CeEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCC------CcEEEEeCCCcc
Q 038533 93 LLASSG------DFLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSID------TTCTIWDIEKGV 160 (337)
Q Consensus 93 ~l~~~~------~~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d------g~i~v~d~~~~~ 160 (337)
+++.|+ +.+.+||..+.+...+..+.... .....+.+ ++.+++.|+.+ ..+.+||+.+.+
T Consensus 58 lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-----~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~d~~~~~ 129 (306)
T 3ii7_A 58 VYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPR-----DSLAACAA---EGKIYTSGGSEVGNSALYLFECYDTRTES 129 (306)
T ss_dssp EEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCC-----BSCEEEEE---TTEEEEECCBBTTBSCCCCEEEEETTTTE
T ss_pred EEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccc-----cceeEEEE---CCEEEEECCCCCCCcEeeeEEEEeCCCCc
Confidence 777765 17889999888654444433221 22222222 66788888765 468899988765
Q ss_pred c--hhhhhccCCceeEEEeCCCcEEEEEcC---------CCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEE
Q 038533 161 V--ETQLIAHDKEVYDICWGEARVFASVSA---------DGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYM 229 (337)
Q Consensus 161 ~--~~~~~~~~~~v~~~~~~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l 229 (337)
- +..+... ..-.+++..++++++.|+. -..+.+||+.+.+-.... ..+..... .++... ++.++
T Consensus 130 W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~-~~~~~~--~~~i~ 204 (306)
T 3ii7_A 130 WHTKPSMLTQ-RCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELC-PMIEARKN-HGLVFV--KDKIF 204 (306)
T ss_dssp EEEECCCSSC-CBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEEC-CCSSCCBS-CEEEEE--TTEEE
T ss_pred eEeCCCCcCC-cceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECC-Cccchhhc-ceEEEE--CCEEE
Confidence 2 1111111 1111222235677777764 345889999877532221 11111112 222222 66777
Q ss_pred EEEEecCC----EEEEEECCCCC-CCeEEeecccceeeEEEeCCCCCCeEEEEcCC-----CcEEEEeCC
Q 038533 230 ATILMDSN----KVVILDIRSPT-LPVAELERHRACVNAIAWAPQSRRHICSVGDD-----SQAFIWELP 289 (337)
Q Consensus 230 ~~~~~d~~----~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~iw~~~ 289 (337)
+.|+.++. .+.+||+.+.. ..+..+.........+.+ ++. +++.|+.+ ..+.+||..
T Consensus 205 v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~~~~yd~~ 271 (306)
T 3ii7_A 205 AVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSI-VYVLAGFQGVGRLGHILEYNTE 271 (306)
T ss_dssp EECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTE-EEEEECBCSSSBCCEEEEEETT
T ss_pred EEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCE-EEEEeCcCCCeeeeeEEEEcCC
Confidence 77765431 28999988632 111111111112223333 455 77788754 457788887
No 302
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.72 E-value=0.025 Score=51.06 Aligned_cols=186 Identities=10% Similarity=-0.011 Sum_probs=109.0
Q ss_pred EEEEeCCeEEEEecCCCCcccee-eecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCc
Q 038533 93 LLASSGDFLRLWDVGDSSIEPVA-VLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKE 171 (337)
Q Consensus 93 ~l~~~~~~v~vw~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~ 171 (337)
+|.+....|+..++......... .+.+- ..+.+++|.+.++.++++-...+.|+.+++........+...-..
T Consensus 320 Ll~~~~~~i~~i~l~~~~~~~~~~~~~~l------~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~ 393 (619)
T 3s94_A 320 LLLARRTDLRRISLDTPDFTDIVLQLEDI------RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAH 393 (619)
T ss_dssp EEEEESSCEEEEESSSTTCCCEECCCSCC------SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSC
T ss_pred EEEEcccceEEEecCCCccceeEEecccc------CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCC
Confidence 33333337777777665322111 11111 456789999844555555556788999998654322222222245
Q ss_pred eeEEEeC--CCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCC
Q 038533 172 VYDICWG--EARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTL 249 (337)
Q Consensus 172 v~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~ 249 (337)
...++++ .++++++-+..+.|.+.++..... ..+... .-.....++++|..+.++.+-......|...++.. .
T Consensus 394 p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~-~~l~~~--~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG--~ 468 (619)
T 3s94_A 394 PDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMR-KILISE--DLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDG--S 468 (619)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECT--TCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTS--C
T ss_pred cCceEEecccCcEEEEeCCCCcEEEEeCCCCeE-EEEEEC--CCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCC--C
Confidence 6677777 466777777788999999986643 333322 23567899999943444444222222377666653 2
Q ss_pred CeEEe-ecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCC
Q 038533 250 PVAEL-ERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 250 ~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 289 (337)
....+ ...-...+.|++.+++..+.++=+..+.|...++.
T Consensus 469 ~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~d 509 (619)
T 3s94_A 469 DRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTD 509 (619)
T ss_dssp SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESS
T ss_pred ccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecC
Confidence 22233 22345678999998776244454556788888887
No 303
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.71 E-value=0.032 Score=54.13 Aligned_cols=171 Identities=11% Similarity=0.094 Sum_probs=96.5
Q ss_pred cEEEEeCCCccchhhhhc-cCCceeEEE---eC--CCcEEEEEc----------CCCeEEEEECCCCCCceeeecCCCCC
Q 038533 150 TCTIWDIEKGVVETQLIA-HDKEVYDIC---WG--EARVFASVS----------ADGSVRIFDLRDKEHSTIIYESPQPD 213 (337)
Q Consensus 150 ~i~v~d~~~~~~~~~~~~-~~~~v~~~~---~~--~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~~~~~ 213 (337)
.|++.|..+.+.+..+.- ....+.+++ |. +..++++|. ..|.|.+|++...+ ...+... ..+
T Consensus 808 ~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~k-L~lv~~~-~v~ 885 (1158)
T 3ei3_A 808 NLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGK-LQTVAEK-EVK 885 (1158)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTE-EEEEEEE-EES
T ss_pred EEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCE-EEEEEEE-EcC
Confidence 366677666655443331 223344444 33 246788776 35889999997443 3333222 235
Q ss_pred CCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCC
Q 038533 214 TPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPV 293 (337)
Q Consensus 214 ~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~ 293 (337)
+++++++-- +|++++.. ... |++|++... +.+..-..+-..|..+.....+. +++.|..-..+.+...+ ..
T Consensus 886 g~v~al~~~--~g~Lla~i--g~~-l~vy~l~~~-~~L~~~~~~~~~i~~~~l~~~~~-~I~vgD~~~Sv~~~~y~--~~ 956 (1158)
T 3ei3_A 886 GAVYSMVEF--NGKLLASI--NST-VRLYEWTTE-KELRTECNHYNNIMALYLKTKGD-FILVGDLMRSVLLLAYK--PM 956 (1158)
T ss_dssp SCEEEEEEE--TTEEEEEE--TTE-EEEEEECTT-SCEEEEEEECCCSCEEEEEEETT-EEEEEESSBCEEEEEEE--TT
T ss_pred CcCEEEeee--CCEEEEEc--CCE-EEEEECCCC-ceEEEEeeccccEEEEEEeccCC-EEEEEEhhheEEEEEEE--cC
Confidence 788887754 55444433 344 999999863 33331111111233223323455 89999888888877665 21
Q ss_pred CCCCCCCceeeee--CCCceeEEEEccCCCceEEEEcCCcEEEEe
Q 038533 294 AGPNGIDPMSMYS--AGSEINQLQWSPAQPDWLAIAFSNKMQLLK 336 (337)
Q Consensus 294 ~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~ 336 (337)
. .....+.. +...++++.+-.++ .++.+..+|.+.+.+
T Consensus 957 ~----~~L~~~a~D~~~~~vta~~~ld~~-t~l~aD~~gNl~vl~ 996 (1158)
T 3ei3_A 957 E----GNFEEIARDFNPNWMSAVEILDDD-NFLGAENAFNLFVCQ 996 (1158)
T ss_dssp T----TEEEEEEECCSCBCEEEEEEEETT-EEEEEETTSEEEEEE
T ss_pred C----CeEEEEEeecccccEEEEEEEccC-cEEEEcCCCcEEEEe
Confidence 1 11222222 35568888887665 577778888888765
No 304
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.71 E-value=0.0098 Score=48.94 Aligned_cols=183 Identities=14% Similarity=0.194 Sum_probs=108.8
Q ss_pred EEEEeCC-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecC---CCC---eEEEee-C--CCcEEEEeCC--Ccc
Q 038533 93 LLASSGD-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEI---EPK---RIGTCS-I--DTTCTIWDIE--KGV 160 (337)
Q Consensus 93 ~l~~~~~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~---~l~~~~-~--dg~i~v~d~~--~~~ 160 (337)
+|++.-. .+.+||+ ++ +.+..+.. +.+..+..-|. .++ ++++.. . +++|.+|++. +++
T Consensus 43 ii~t~k~~gL~Vydl-~G--~~l~~~~~-------g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~ 112 (355)
T 3amr_A 43 LITTNKKSGLVVYSL-DG--KMLHSYNT-------GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT 112 (355)
T ss_dssp EEEEETTTEEEEEET-TS--CEEEEECC-------SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC
T ss_pred EEEEcCCCCEEEEcC-CC--cEEEEccC-------CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc
Confidence 4444445 9999999 55 45566654 45666665540 121 233333 3 5789999763 333
Q ss_pred chhhhhc------cC-CceeEEEe--CC--Cc-EEEEEcCCCeEEEEECCC---CCCce-eeecCCCCCCCceEEEeecC
Q 038533 161 VETQLIA------HD-KEVYDICW--GE--AR-VFASVSADGSVRIFDLRD---KEHST-IIYESPQPDTPLLRLAWNKQ 224 (337)
Q Consensus 161 ~~~~~~~------~~-~~v~~~~~--~~--~~-~l~~~~~dg~i~iwd~~~---~~~~~-~~~~~~~~~~~i~~~~~~~~ 224 (337)
+..+.. .. ..+..+|+ ++ +. ++++...+|.+..|++.. ++... .+... ...+.+..+...+
T Consensus 113 -l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f-~lgsq~EgcvvDd- 189 (355)
T 3amr_A 113 -LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF-KMNSQTEGMAADD- 189 (355)
T ss_dssp -EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE-ECSSCEEEEEEET-
T ss_pred -eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe-cCCCCcceEEEcC-
Confidence 333311 12 56777887 52 33 677888899999999843 21111 11111 1235778888888
Q ss_pred CCcEEEEEEecCCEEEEEECCCCC----CCeEEee-cc-cceeeEEEe--CCCCC-CeEEEEcCCCcEEEEeCC
Q 038533 225 DLRYMATILMDSNKVVILDIRSPT----LPVAELE-RH-RACVNAIAW--APQSR-RHICSVGDDSQAFIWELP 289 (337)
Q Consensus 225 ~~~~l~~~~~d~~~i~i~d~~~~~----~~~~~~~-~~-~~~v~~~~~--~~~~~-~~l~~~~~dg~i~iw~~~ 289 (337)
....|+.+-++.. |..+|.+... +.+..+. ++ ...+..|++ .++++ ++++++-.++...+||..
T Consensus 190 ~~g~Lyv~eEd~G-Iw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 190 EYGRLYIAEEDEA-IWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp TTTEEEEEETTTE-EEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred CCCeEEEecccce-EEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 7888888888877 8888865321 2333331 22 135777777 45555 355555467899999997
No 305
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.70 E-value=0.0022 Score=55.11 Aligned_cols=151 Identities=12% Similarity=0.134 Sum_probs=93.6
Q ss_pred ceeEEEeCC--CcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecC---C-EEEEEEC
Q 038533 171 EVYDICWGE--ARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS---N-KVVILDI 244 (337)
Q Consensus 171 ~v~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~---~-~i~i~d~ 244 (337)
....+++++ +..|+.+...+.|+.+|+......... . .......++|++ +++.|+++...+ . .+..++.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-~---~~~~P~~ia~d~-~G~~lyvad~~~~~~~~~v~~~~~ 212 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-S---GLSKVRTICWTH-EADSMIITNDQNNNDRPNNYILTR 212 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-C---CCSCEEEEEECT-TSSEEEEEECCSCTTSEEEEEEEG
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-c---CCCCcceEEEeC-CCCEEEEEeCCCCcccceEEEEeC
Confidence 457788883 456666665588999999876533332 2 235678999999 888666665422 1 2444554
Q ss_pred CCCCCCeEEeecccceeeEEEeCC-CCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeee--eCCCceeEEEEccCCC
Q 038533 245 RSPTLPVAELERHRACVNAIAWAP-QSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMY--SAGSEINQLQWSPAQP 321 (337)
Q Consensus 245 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~ 321 (337)
.........+.. ......++++| ++. ++++-..++.|..++...+. ...+. ........++|+|+++
T Consensus 213 ~g~~~~~~~l~~-~~~p~giavdp~~g~-lyv~d~~~~~V~~~~~~~~~--------~~~~~~~~~~~~P~gia~~pdG~ 282 (430)
T 3tc9_A 213 ESGFKVITELTK-GQNCNGAETHPINGE-LYFNSWNAGQVFRYDFTTQE--------TTPLFTIQDSGWEFHIQFHPSGN 282 (430)
T ss_dssp GGTSCSEEEEEE-CSSCCCEEECTTTCC-EEEEETTTTEEEEEETTTTE--------EEEEEECSSSSCCEEEEECTTSS
T ss_pred CCceeeeeeecc-CCCceEEEEeCCCCE-EEEEECCCCEEEEEECCCCc--------EEEEEEcCCCCcceeEEEcCCCC
Confidence 331221233332 33467889999 565 77777778899999987211 11111 1223568999999998
Q ss_pred ceEEEE-cCCcEEEEe
Q 038533 322 DWLAIA-FSNKMQLLK 336 (337)
Q Consensus 322 ~l~~~~-~d~~i~iw~ 336 (337)
.|+.+. ..+.|..++
T Consensus 283 ~lyv~d~~~~~I~~~~ 298 (430)
T 3tc9_A 283 YAYIVVVNQHYILRSD 298 (430)
T ss_dssp EEEEEETTTTEEEEEE
T ss_pred EEEEEECCCCEEEEEe
Confidence 565554 567777764
No 306
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.65 E-value=0.02 Score=47.82 Aligned_cols=235 Identities=10% Similarity=0.020 Sum_probs=120.0
Q ss_pred CCeEEEecCCCCcccCcCCccEEEEeCC-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCC----CCeEEEee
Q 038533 72 PPTKLMFDPNSSSRKSSSNRHLLASSGD-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIE----PKRIGTCS 146 (337)
Q Consensus 72 ~i~~i~~~~~~~~~~~~~~~~~l~~~~~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~l~~~~ 146 (337)
....|+|.|+++ ++++-.+ .|++++ .+++ +.+..+.... .. ......|+++| + +.++++-+
T Consensus 30 ~P~~ia~~pdG~---------l~V~e~~g~I~~~d-~~G~-~~~~~~~v~~-~g-~~g~~gia~~p-df~~~g~lyv~~~ 95 (354)
T 3a9g_A 30 VPWSIAPLGGGR---------YLVTERPGRLVLIS-PSGK-KLVASFDVAN-VG-EAGLLGLALHP-EFPKKSWVYLYAS 95 (354)
T ss_dssp CEEEEEEEETTE---------EEEEETTTEEEEEC-SSCE-EEEEECCCCC-ST-TCSEEEEEECT-TTTTSCEEEEEEE
T ss_pred CCeEEEEcCCCe---------EEEEeCCCEEEEEe-CCCc-eEeeccceee-cC-CCceeeEEeCC-CCCcCCEEEEEEe
Confidence 468899999998 8888776 888887 3442 2332222000 00 14678999998 5 44444433
Q ss_pred C---C----CcEEEEeCCCc-------cch-hhhhc-cCCceeEEEeC-CCcEEEEEcC-------------CCeEEEEE
Q 038533 147 I---D----TTCTIWDIEKG-------VVE-TQLIA-HDKEVYDICWG-EARVFASVSA-------------DGSVRIFD 196 (337)
Q Consensus 147 ~---d----g~i~v~d~~~~-------~~~-~~~~~-~~~~v~~~~~~-~~~~l~~~~~-------------dg~i~iwd 196 (337)
. + ..|..++.... +.+ ..+.. .......++|. ++.++++.+. .|.|.-++
T Consensus 96 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~ 175 (354)
T 3a9g_A 96 YFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVD 175 (354)
T ss_dssp EECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEEC
T ss_pred ccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEc
Confidence 2 3 56777776543 111 11111 11124678898 6765555432 24555555
Q ss_pred CCCCCC------ceeeecCCCCCCCceEEEeecCCCcEEEEEEecC--CEEEEEECCC---------------CCCCeEE
Q 038533 197 LRDKEH------STIIYESPQPDTPLLRLAWNKQDLRYMATILMDS--NKVVILDIRS---------------PTLPVAE 253 (337)
Q Consensus 197 ~~~~~~------~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~--~~i~i~d~~~---------------~~~~~~~ 253 (337)
....-. ...++.. .+ .....++|+|.++.++++-...+ ..|.+..... ...++..
T Consensus 176 ~dG~~p~~npf~~~~i~a~-G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~ 253 (354)
T 3a9g_A 176 EEGRPPADNPFPNSPIWSY-GH-RNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVID 253 (354)
T ss_dssp TTSCCCTTSSSTTCCEEEE-CC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEE
T ss_pred CCCCCCCCCCCCCCcEEEE-cc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEee
Confidence 543200 0011111 11 34567999984455444422211 1243332111 0123333
Q ss_pred eecccceeeEEEeC-------CCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeee-eCCCceeEEEEccCCCceEE
Q 038533 254 LERHRACVNAIAWA-------PQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMY-SAGSEINQLQWSPAQPDWLA 325 (337)
Q Consensus 254 ~~~~~~~v~~~~~~-------~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~ 325 (337)
+.........++|. .+|. ++++.-..+.|...++. ..... .....+. +....+..+++.|||..+++
T Consensus 254 ~~~~~~ap~G~~~y~g~~fp~~~G~-l~v~~~~~~~v~~~~~~--~~g~~--~~~~~~~~~~~~rp~~v~~~pDG~lyv~ 328 (354)
T 3a9g_A 254 TGSETWAPSGASFVHGDMFPGLRGW-LLIACLRGSMLAAVNFG--DNMEV--RKISTFFKNVFGRLRDVVIDDDGGILIS 328 (354)
T ss_dssp CTTCCCCEEEEEECCSSSCGGGTTE-EEEEETTTTEEEEEEEC--GGGCE--EEEEEECTTTSCCEEEEEECTTSCEEEE
T ss_pred cCCCCcCCcceEEECCCCCcccCCc-EEEEEcCCCEEEEEEEC--CCCcc--cceeeeccCCCCCeeEEEECCCCcEEEE
Confidence 31122356788884 4565 67766677788888877 21110 0011121 22457899999999965555
Q ss_pred EE
Q 038533 326 IA 327 (337)
Q Consensus 326 ~~ 327 (337)
..
T Consensus 329 ~~ 330 (354)
T 3a9g_A 329 TS 330 (354)
T ss_dssp EC
T ss_pred Ee
Confidence 43
No 307
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.63 E-value=0.015 Score=47.13 Aligned_cols=179 Identities=14% Similarity=0.093 Sum_probs=93.2
Q ss_pred EEEEeC-C------eEEEEecCCCC---ccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCC-----CcEEEEeCC
Q 038533 93 LLASSG-D------FLRLWDVGDSS---IEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSID-----TTCTIWDIE 157 (337)
Q Consensus 93 ~l~~~~-~------~v~vw~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-----g~i~v~d~~ 157 (337)
+++.|+ + .+.+||..+.+ .+.+..+.... ..-..+.+ ++.+++.|+.+ ..+.+||+.
T Consensus 65 l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r-----~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~d~~ 136 (301)
T 2vpj_A 65 IYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRR-----GLAGATTL---GDMIYVSGGFDGSRRHTSMERYDPN 136 (301)
T ss_dssp EEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCC-----BSCEEEEE---TTEEEEECCBCSSCBCCEEEEEETT
T ss_pred EEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCc-----cceeEEEE---CCEEEEEcccCCCcccceEEEEcCC
Confidence 666665 1 68899998875 44443333221 22222222 56788888754 358889987
Q ss_pred Cccch--hhhhccCCceeEEEeCCCcEEEEEcCC-----CeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEE
Q 038533 158 KGVVE--TQLIAHDKEVYDICWGEARVFASVSAD-----GSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMA 230 (337)
Q Consensus 158 ~~~~~--~~~~~~~~~v~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 230 (337)
+.+-. ..+.. ...-.+++..++++++.|+.+ ..+..||+.+.+-... ...+........+.+ ++.+++
T Consensus 137 ~~~W~~~~~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~---~~~i~v 211 (301)
T 2vpj_A 137 IDQWSMLGDMQT-AREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNV-TPMATKRSGAGVALL---NDHIYV 211 (301)
T ss_dssp TTEEEEEEECSS-CCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEE-CCCSSCCBSCEEEEE---TTEEEE
T ss_pred CCeEEECCCCCC-CcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeC-CCCCcccccceEEEE---CCEEEE
Confidence 76521 11111 111112222267777777754 4588999887653322 111111112222322 667777
Q ss_pred EEEecC----CEEEEEECCCCCCCeEEee---cccceeeEEEeCCCCCCeEEEEcCC-----CcEEEEeCC
Q 038533 231 TILMDS----NKVVILDIRSPTLPVAELE---RHRACVNAIAWAPQSRRHICSVGDD-----SQAFIWELP 289 (337)
Q Consensus 231 ~~~~d~----~~i~i~d~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~iw~~~ 289 (337)
.|+.++ ..+.+||+.+.. ...+. ........+.+ ++. +++.|+.+ ..+.+||..
T Consensus 212 ~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd~~ 277 (301)
T 2vpj_A 212 VGGFDGTAHLSSVEAYNIRTDS--WTTVTSMTTPRCYVGATVL--RGR-LYAIAGYDGNSLLSSIECYDPI 277 (301)
T ss_dssp ECCBCSSSBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEEE--TTE-EEEECCBCSSSBEEEEEEEETT
T ss_pred EeCCCCCcccceEEEEeCCCCc--EEECCCCCCcccceeEEEE--CCE-EEEEcCcCCCcccccEEEEcCC
Confidence 777642 138999998632 12221 11111122222 455 77777755 346777776
No 308
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.58 E-value=0.021 Score=46.36 Aligned_cols=262 Identities=10% Similarity=0.158 Sum_probs=146.2
Q ss_pred cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeCC-eEEEEecCCC
Q 038533 31 GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSGD-FLRLWDVGDS 109 (337)
Q Consensus 31 ~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~~-~v~vw~~~~~ 109 (337)
++++.+--. .+++..|.|.|+......... . .. -.+.-.+|..+ ++|--.+ +++++|+++.
T Consensus 36 DkyicVrE~-~~~~~~VvIiDl~n~~~~~Rr--p--i~----AdsAIMnP~~~---------ViALrag~~LQiFnletK 97 (365)
T 2xzh_A 36 DKFICIREK-VGEQAQVVIIDMNDPSNPIRR--P--IS----ADSAIMNPASK---------VIALKAGKTLQIFNIEMK 97 (365)
T ss_dssp TTEEEEEEE-ETTEEEEEEEETTSTTSCEEE--E--CC----CSEEEECSSSS---------EEEEEETTEEEEEETTTT
T ss_pred CceEEEEec-CCCCCEEEEEECCCCCCcccc--c--cc----cceeeeCCCcc---------EEEEecCCeEEEechHHh
Confidence 556555442 334567888777765544332 1 11 12344688888 8887666 9999999998
Q ss_pred CccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCc-cchhhhhcc----CCceeEEEeC-CCcEE
Q 038533 110 SIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKG-VVETQLIAH----DKEVYDICWG-EARVF 183 (337)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~-~~~~~~~~~----~~~v~~~~~~-~~~~l 183 (337)
..++...-. .+|.--.|- +.+.|+-.+ +..|+-|+++.. .+.+.+..| ...|..-..+ +.+++
T Consensus 98 --~klks~~~~------e~VvfWkWi--s~~~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~ 166 (365)
T 2xzh_A 98 --SKMKAHTMT------DDVTFWKWI--SLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWL 166 (365)
T ss_dssp --EEEEEEECS------SCEEEEEEC--SSSEEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEE
T ss_pred --hhhcceecC------CccEEEEec--CCCeEEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEE
Confidence 444444432 577788885 456666665 468999999753 344444433 3456666666 56766
Q ss_pred EEEcC-------CCeEEEEECCCCCCceeeecCCCCCCCceEEEe--ecCCCcEEEEEEec--CCEEEEEECCCC--CCC
Q 038533 184 ASVSA-------DGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAW--NKQDLRYMATILMD--SNKVVILDIRSP--TLP 250 (337)
Q Consensus 184 ~~~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~l~~~~~d--~~~i~i~d~~~~--~~~ 250 (337)
+..+- .|.+.+|..+... ....+. |......+.+ ++....++..+... +.++++.++..+ +.+
T Consensus 167 ~l~GI~~~~~~v~G~mQLYS~er~~--sQ~ieG--haa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~ 242 (365)
T 2xzh_A 167 LLTGISAQQNRVVGAMQLYSVDRKV--SQPIEG--HAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQ 242 (365)
T ss_dssp EEEEEEEETTEEEEEEEEEETTTTE--EEEECC--SEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCC
T ss_pred EEEeEeccCCccceeEEEEeecccc--cceeee--eeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCC
Confidence 64432 3778899887654 222222 2111111111 11011223333221 234999998553 211
Q ss_pred -e--EE---ee---cccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCC
Q 038533 251 -V--AE---LE---RHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQP 321 (337)
Q Consensus 251 -~--~~---~~---~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 321 (337)
. +. +- .-..-.-++..++... ++..-+.-|.|++||++.++ ..+...-..+.|..-+-+....
T Consensus 243 ~f~kk~vdi~fppea~~DFPVamqvs~kyg-viyviTK~G~ihlyDleTgt-------~i~~nrIS~d~iF~ta~~~~~~ 314 (365)
T 2xzh_A 243 PFPKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETGT-------CIYMNRISGETIFVTAPHEATA 314 (365)
T ss_dssp CCCCEEEEECCCTTCTTCCEEEEEEETTTT-EEEEEETTSEEEEEETTTCC-------EEEEEECCSSCEEEEEEEGGGT
T ss_pred CcccccceeeCCccccCCceEEEEecccCC-EEEEEeCCcEEEEEEcccCc-------EEEEeccCCCceEEecccCCCC
Confidence 1 11 10 0122345677777777 89999999999999999333 2233333445554444444433
Q ss_pred ceEEEEcCCcEE
Q 038533 322 DWLAIAFSNKMQ 333 (337)
Q Consensus 322 ~l~~~~~d~~i~ 333 (337)
-+++....|.|.
T Consensus 315 Gi~~Vnr~GqVl 326 (365)
T 2xzh_A 315 GIIGVNRKGQVL 326 (365)
T ss_dssp EEEEEETTCEEE
T ss_pred cEEEEcCCCEEE
Confidence 466666666553
No 309
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.51 E-value=0.015 Score=47.23 Aligned_cols=178 Identities=11% Similarity=0.051 Sum_probs=93.9
Q ss_pred EEEEeC-C---eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCC----CcEEEEeCCCccc--h
Q 038533 93 LLASSG-D---FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSID----TTCTIWDIEKGVV--E 162 (337)
Q Consensus 93 ~l~~~~-~---~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d----g~i~v~d~~~~~~--~ 162 (337)
+++.|+ + .+.+||..+.+...+..+.... ..-..+.+ ++.+++.|+.+ ..+.+||+.+.+- +
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r-----~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~ 85 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKR-----RDAACVFW---DNVVYILGGSQLFPIKRMDCYNVVKDSWYSK 85 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCC-----BSCEEEEE---TTEEEEECCBSSSBCCEEEEEETTTTEEEEE
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCccc-----ceeEEEEE---CCEEEEEeCCCCCCcceEEEEeCCCCeEEEC
Confidence 666665 2 8999999988654443333221 22222222 66788888755 6788999887652 1
Q ss_pred hhhhccCCceeEEEeCCCcEEEEEcCC------CeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEec-
Q 038533 163 TQLIAHDKEVYDICWGEARVFASVSAD------GSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMD- 235 (337)
Q Consensus 163 ~~~~~~~~~v~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d- 235 (337)
..+...... .+++..++.+++.|+.+ ..+.+||+.+.+-... ...+........+.+ ++.+++.|+.+
T Consensus 86 ~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~---~~~iyv~GG~~~ 160 (306)
T 3ii7_A 86 LGPPTPRDS-LAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTK-PSMLTQRCSHGMVEA---NGLIYVCGGSLG 160 (306)
T ss_dssp ECCSSCCBS-CEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEE-CCCSSCCBSCEEEEE---TTEEEEECCEES
T ss_pred CCCCccccc-eeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeC-CCCcCCcceeEEEEE---CCEEEEECCCCC
Confidence 112111111 12222267777777765 4588999887653222 111111112222222 66777776642
Q ss_pred --------CCEEEEEECCCCCCCeEEeec---ccceeeEEEeCCCCCCeEEEEcCC-----CcEEEEeCC
Q 038533 236 --------SNKVVILDIRSPTLPVAELER---HRACVNAIAWAPQSRRHICSVGDD-----SQAFIWELP 289 (337)
Q Consensus 236 --------~~~i~i~d~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~iw~~~ 289 (337)
.. +.+||+.+.. -..+.. ....-..+.+ ++. +++.|+.+ ..+.+||..
T Consensus 161 ~~~~~~~~~~-~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~~~~yd~~ 224 (306)
T 3ii7_A 161 NNVSGRVLNS-CEVYDPATET--WTELCPMIEARKNHGLVFV--KDK-IFAVGGQNGLGGLDNVEYYDIK 224 (306)
T ss_dssp CTTTCEECCC-EEEEETTTTE--EEEECCCSSCCBSCEEEEE--TTE-EEEECCEETTEEBCCEEEEETT
T ss_pred CCCcccccce-EEEeCCCCCe--EEECCCccchhhcceEEEE--CCE-EEEEeCCCCCCCCceEEEeeCC
Confidence 33 8899988632 222211 1111122222 455 77777654 357888887
No 310
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.49 E-value=0.018 Score=46.96 Aligned_cols=172 Identities=12% Similarity=0.044 Sum_probs=86.9
Q ss_pred eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCC-----CcEEEEeCCCccc--hhhhhccCCce
Q 038533 100 FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSID-----TTCTIWDIEKGVV--ETQLIAHDKEV 172 (337)
Q Consensus 100 ~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-----g~i~v~d~~~~~~--~~~~~~~~~~v 172 (337)
.+.+||+.+.+...+..+.... .....+.+ ++.+++.|+.+ ..+.+||+.+.+- +..+......
T Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r-----~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~- 161 (308)
T 1zgk_A 91 ALDCYNPMTNQWSPCAPMSVPR-----NRIGVGVI---DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIG- 161 (308)
T ss_dssp CEEEEETTTTEEEECCCCSSCC-----BTCEEEEE---TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBS-
T ss_pred eEEEECCCCCeEeECCCCCcCc-----cccEEEEE---CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccc-
Confidence 5888998887544443333221 22222222 56788887644 3688899877642 1112111111
Q ss_pred eEEEeCCCcEEEEEcCC-----CeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecC----CEEEEEE
Q 038533 173 YDICWGEARVFASVSAD-----GSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS----NKVVILD 243 (337)
Q Consensus 173 ~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~----~~i~i~d 243 (337)
.+++..++.+++.|+.+ ..+.+||+.+.+-.... ..+........+.+ ++.+++.|+.++ ..+.+||
T Consensus 162 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd 237 (308)
T 1zgk_A 162 VGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMIT-AMNTIRSGAGVCVL---HNCIYAAGGYDGQDQLNSVERYD 237 (308)
T ss_dssp CEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECC-CCSSCCBSCEEEEE---TTEEEEECCBCSSSBCCCEEEEE
T ss_pred eEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCC-CCCCccccceEEEE---CCEEEEEeCCCCCCccceEEEEe
Confidence 12222267777777654 45889998876532221 11111122222333 667777776542 1389999
Q ss_pred CCCCCCCeEEe---ecccceeeEEEeCCCCCCeEEEEcCC-----CcEEEEeCC
Q 038533 244 IRSPTLPVAEL---ERHRACVNAIAWAPQSRRHICSVGDD-----SQAFIWELP 289 (337)
Q Consensus 244 ~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~iw~~~ 289 (337)
+.+.. -..+ .........+.+ ++. +++.|+.+ ..+.+||..
T Consensus 238 ~~~~~--W~~~~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd~~ 286 (308)
T 1zgk_A 238 VETET--WTFVAPMKHRRSALGITVH--QGR-IYVLGGYDGHTFLDSVECYDPD 286 (308)
T ss_dssp TTTTE--EEECCCCSSCCBSCEEEEE--TTE-EEEECCBCSSCBCCEEEEEETT
T ss_pred CCCCc--EEECCCCCCCccceEEEEE--CCE-EEEEcCcCCCcccceEEEEcCC
Confidence 87632 1111 111111122222 455 77777654 346677776
No 311
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.49 E-value=0.022 Score=47.33 Aligned_cols=189 Identities=12% Similarity=0.071 Sum_probs=105.4
Q ss_pred eeEEEeecCCCCeEEEe------------eCCCcEEEEeCCCcc-chhhh--hc-----cCCceeEEEeC---CCc-EEE
Q 038533 129 LTSFDWNEIEPKRIGTC------------SIDTTCTIWDIEKGV-VETQL--IA-----HDKEVYDICWG---EAR-VFA 184 (337)
Q Consensus 129 i~~~~~~~~~~~~l~~~------------~~dg~i~v~d~~~~~-~~~~~--~~-----~~~~v~~~~~~---~~~-~l~ 184 (337)
.-+++..| ++..++++ ..+|.|.++|..+.. ....+ .+ .......+.+. ++. +|+
T Consensus 52 ~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 52 SEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCEEEECT-TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred cceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 44666666 66555554 268999999987431 11111 11 22345666664 232 344
Q ss_pred EE-cC--CCeEEEEECCCCCCceeee-cCC-CCCCCceEEEeecCCCcEEEEEEe-----------------cCCEEEEE
Q 038533 185 SV-SA--DGSVRIFDLRDKEHSTIIY-ESP-QPDTPLLRLAWNKQDLRYMATILM-----------------DSNKVVIL 242 (337)
Q Consensus 185 ~~-~~--dg~i~iwd~~~~~~~~~~~-~~~-~~~~~i~~~~~~~~~~~~l~~~~~-----------------d~~~i~i~ 242 (337)
++ .. +.++.+|++.......... ... ..-...+.+.+.+ ++.+.++... .+. |+-+
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~-vyr~ 208 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSF-VTYY 208 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEE-EEEE
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCccE-EEEE
Confidence 43 33 5678888876543322221 111 1234578899998 8877666431 123 5555
Q ss_pred ECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEcc-CCC
Q 038533 243 DIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSP-AQP 321 (337)
Q Consensus 243 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~ 321 (337)
|.. + +..+...-...+.++|+|+++.+.++-+..+.|..|++. ..... ............-.++..+ +|.
T Consensus 209 d~~---~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~--~~g~l---~~~~~~~~~g~PDGi~vD~e~G~ 279 (355)
T 3sre_A 209 SPN---D-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKH--ANWTL---TPLRVLSFDTLVDNISVDPVTGD 279 (355)
T ss_dssp CTT---C-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC--TTSCE---EEEEEEECSSEEEEEEECTTTCC
T ss_pred ECC---e-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEEC--CCCcE---ecCEEEeCCCCCceEEEeCCCCc
Confidence 542 2 333333334568999999998455556678899999997 21110 0111223356678889998 587
Q ss_pred ceEEEEcC
Q 038533 322 DWLAIAFS 329 (337)
Q Consensus 322 ~l~~~~~d 329 (337)
.++++..+
T Consensus 280 lwva~~~~ 287 (355)
T 3sre_A 280 LWVGCHPN 287 (355)
T ss_dssp EEEEEESC
T ss_pred EEEEecCC
Confidence 66655433
No 312
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.47 E-value=0.012 Score=51.10 Aligned_cols=163 Identities=11% Similarity=0.063 Sum_probs=95.5
Q ss_pred ceeEEEeCC---CcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEe-------ecCCCcEEEEEEecC----
Q 038533 171 EVYDICWGE---ARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAW-------NKQDLRYMATILMDS---- 236 (337)
Q Consensus 171 ~v~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~-------~~~~~~~l~~~~~d~---- 236 (337)
....|+|+| ++++++-...+.|++.|+..+..................++| ++ +++.|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~-~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYAD-EAEYMIVAIDYDGKGD 218 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBC-TTCEEEEEECCCTTGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCC-CCCEEEEEeCCCCCcc
Confidence 466788884 344444444577999999887654443222112235788999 98 888777766554
Q ss_pred --CEEEEEECCCCCCCe-----EEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCC-------CCCCCCCCCC---
Q 038533 237 --NKVVILDIRSPTLPV-----AELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELP-------LPPVAGPNGI--- 299 (337)
Q Consensus 237 --~~i~i~d~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~-------~~~~~~~~~~--- 299 (337)
..|.+++....+... ..+... .....++.+|++..++++-..++.|..+|+. .+....|...
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~ 297 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNP 297 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCT
T ss_pred cCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccc
Confidence 126677643312211 233322 3456789999666467777788889999986 3333111000
Q ss_pred ---CceeeeeCCCceeEEEEccCCCceEEEE-cCCcEEEE
Q 038533 300 ---DPMSMYSAGSEINQLQWSPAQPDWLAIA-FSNKMQLL 335 (337)
Q Consensus 300 ---~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iw 335 (337)
..+...........++|+|+++.|+.+. ....|+.+
T Consensus 298 g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~ki 337 (496)
T 3kya_A 298 NTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRS 337 (496)
T ss_dssp TTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred cccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEE
Confidence 0111112234568999999998555554 55667664
No 313
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.42 E-value=0.043 Score=46.27 Aligned_cols=146 Identities=15% Similarity=0.134 Sum_probs=93.8
Q ss_pred cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCC---CCCCeEEEecCCCCcccCcCCccEEEEeCC-eEEEEec
Q 038533 31 GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDH---PYPPTKLMFDPNSSSRKSSSNRHLLASSGD-FLRLWDV 106 (337)
Q Consensus 31 ~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~---~~~i~~i~~~~~~~~~~~~~~~~~l~~~~~-~v~vw~~ 106 (337)
+..|+++- ++.||.-++..+. .++. +...+ -..|..+..+|+|. +||..++ .|.|-.+
T Consensus 32 ~t~i~~a~-----~n~iR~~~i~~~~-~Yk~---L~~~~~i~f~~i~qlvlSpsG~---------lLAl~g~~~V~Vv~L 93 (452)
T 3pbp_A 32 GTRIVFIQ-----DNIIRWYNVLTDS-LYHS---LNFSRHLVLDDTFHVISSTSGD---------LLCLFNDNEIFVMEV 93 (452)
T ss_dssp TTEEEEEE-----TTEEEEEETTTCS-SCEE---EECTTTCCCCTTCEEEECTTSS---------EEEEECSSEEEEEEC
T ss_pred CCEEEEEE-----CCEEEEEECCCCC-cceE---EecCcccccCceeEEEECCCCC---------EEEEecCCeEEEEEe
Confidence 78888877 8999987776443 2321 11231 23688899999999 9999987 9999988
Q ss_pred CCCCcc----------ceeeecCCC-CCcccCCeeEEEeecC--CCCeEEEeeCCCcEEEEeCCCcc--chhhhh-----
Q 038533 107 GDSSIE----------PVAVLNNSK-SSEFCAPLTSFDWNEI--EPKRIGTCSIDTTCTIWDIEKGV--VETQLI----- 166 (337)
Q Consensus 107 ~~~~~~----------~~~~~~~~~-~~~~~~~i~~~~~~~~--~~~~l~~~~~dg~i~v~d~~~~~--~~~~~~----- 166 (337)
..+... ..+.+.-.. ......+|..+.|+|. .+..|++-..|+.|++||+.... +. .++
T Consensus 94 P~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~ 172 (452)
T 3pbp_A 94 PWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNS 172 (452)
T ss_dssp CTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSE
T ss_pred cCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccc
Confidence 843200 011222110 0001278999999994 34589999999999999997632 11 121
Q ss_pred ----ccCCceeEEEeC-CCcEEEE--EcCCCeEEEE
Q 038533 167 ----AHDKEVYDICWG-EARVFAS--VSADGSVRIF 195 (337)
Q Consensus 167 ----~~~~~v~~~~~~-~~~~l~~--~~~dg~i~iw 195 (337)
.....|.+++|. ++-.|.. .+..|-|+-.
T Consensus 173 fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 173 FGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred cCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 122568889998 5555555 4477777644
No 314
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.37 E-value=0.036 Score=46.74 Aligned_cols=150 Identities=9% Similarity=0.142 Sum_probs=91.4
Q ss_pred CCcEEEEEcCCCeEEEEECCCCCCceeeecCC-CCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCC--------
Q 038533 179 EARVFASVSADGSVRIFDLRDKEHSTIIYESP-QPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTL-------- 249 (337)
Q Consensus 179 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~-------- 249 (337)
++..++.+- ++.||.-++.....-+.+.... ..-..+..+..+| +|.+|+..+..+ |.|..+..+..
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSp-sG~lLAl~g~~~--V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISST-SGDLLCLFNDNE--IFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECT-TSSEEEEECSSE--EEEEECCTTCSCCCCHHHH
T ss_pred CCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECC-CCCEEEEecCCe--EEEEEecCccccCcccccc
Confidence 344444433 3678877776443222222210 1123678899999 999999987654 88888873221
Q ss_pred -Ce--EEeec------ccceeeEEEeCCCCCC--eEEEEcCCCcEEEEeCCCCCCCCCCCC-Cc---eeeeeCCCceeEE
Q 038533 250 -PV--AELER------HRACVNAIAWAPQSRR--HICSVGDDSQAFIWELPLPPVAGPNGI-DP---MSMYSAGSEINQL 314 (337)
Q Consensus 250 -~~--~~~~~------~~~~v~~~~~~~~~~~--~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~---~~~~~~~~~v~~~ 314 (337)
++ +.+.- ...+|..+.|+|-+.. .|++-..|+.|++||+... ...|... .. +-.......|.++
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s-~~~P~~L~k~~~~fg~d~~~~ev~S~ 185 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNS-QEKPIVLNKPNNSFGLDARVNDITDL 185 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCT-TSCCEEESCCCSEEESCSSCCCEEEE
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccC-CCCCcchhccccccCCCcccceEEEE
Confidence 01 12221 2467999999996542 7999999999999999941 2222100 00 0111123578999
Q ss_pred EEccCCCceEEEE--cCCcEE
Q 038533 315 QWSPAQPDWLAIA--FSNKMQ 333 (337)
Q Consensus 315 ~~~~~~~~l~~~~--~d~~i~ 333 (337)
+|.+++-.|.+.. .+|-|+
T Consensus 186 ~Fg~~~lTLYvl~~t~~GDIY 206 (452)
T 3pbp_A 186 EFSKDGLTLYCLNTTEGGDIF 206 (452)
T ss_dssp EECTTSSCEEEEECTTSCEEE
T ss_pred EEcCCCcEEEEEecCCCCCEE
Confidence 9999887777755 667665
No 315
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.37 E-value=0.12 Score=50.63 Aligned_cols=250 Identities=10% Similarity=0.173 Sum_probs=136.5
Q ss_pred cCCccceeeeeC-CCceeEEEEe------cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCC
Q 038533 9 HLRSENSVTHES-PYPLYAMAVC------GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPN 81 (337)
Q Consensus 9 ~~~~~~~~~~~~-~~~v~~~~~s------~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~ 81 (337)
|-....+..+.. .-.-.++.|. ++++.+--. .++...|.|.|+......... . .. --+.-.+|.
T Consensus 6 pi~~~e~~~L~~lGi~~~~i~f~~~T~eSDkyicvre~-~~~~~~vvIidl~~~~~~~rr--p--i~----AdsAIMnP~ 76 (1630)
T 1xi4_A 6 PIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREK-VGEQAQVVIIDMNDPSNPIRR--P--IS----ADSAIMNPA 76 (1630)
T ss_pred CeehhhhhhhhhcCCCcccccccceeeecCceEEEEec-CCCCceEEEEECCCCCCcccc--c--cc----chhhccCCC
Confidence 333344444443 2234455665 445544332 334568888777665433221 1 11 123346788
Q ss_pred CCcccCcCCccEEEEeCC-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCC-c
Q 038533 82 SSSRKSSSNRHLLASSGD-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEK-G 159 (337)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~-~ 159 (337)
.+ ++|--.+ ++.|+|+.+.+ .++...-. .+|.--.|- +.+.|+-.+ +..|.-|++.. .
T Consensus 77 ~~---------iiALrag~~lQiFnl~~k~--klks~~~~------e~VvfWkWi--s~~~l~lVT-~~aVyHW~~~~~s 136 (1630)
T 1xi4_A 77 SK---------VIALKAGKTLQIFNIEMKS--KMKAHTMT------DDVTFWKWI--SLNTVALVT-DNAVYHWSMEGES 136 (1630)
T ss_pred cc---------eEEEecCCeEEEeehHHhh--hhcccccC------CCceEEEec--CCCeeEEEc-CCeEEEeccCCCC
Confidence 87 8888776 99999998873 33333322 567777885 455565554 46899999974 3
Q ss_pred cchhhhhcc----CCceeEEEeC-CCcEEEEEc-------CCCeEEEEECCCCCCceeeecCCCCCCCceEEEee--cCC
Q 038533 160 VVETQLIAH----DKEVYDICWG-EARVFASVS-------ADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWN--KQD 225 (337)
Q Consensus 160 ~~~~~~~~~----~~~v~~~~~~-~~~~l~~~~-------~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~ 225 (337)
.+.+.+..| ...|..-..+ +.++++..+ -.|.+.+|..+..... ..++ |......+... +..
T Consensus 137 ~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ--~ieg--ha~~F~~~~~~~~~~~ 212 (1630)
T 1xi4_A 137 QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ--PIEG--HAASFAQFKMEGNAEE 212 (1630)
T ss_pred ccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccch--hhhH--hHhhhheeccCCCCCC
Confidence 456666655 3456666666 566666433 3578889988765421 1111 21111111111 101
Q ss_pred CcEEEEEEe--cCCEEEEEECCCC--CCCeE------Eeec---ccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCC
Q 038533 226 LRYMATILM--DSNKVVILDIRSP--TLPVA------ELER---HRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPP 292 (337)
Q Consensus 226 ~~~l~~~~~--d~~~i~i~d~~~~--~~~~~------~~~~---~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 292 (337)
...+..+.. .|..++|.++..+ +.+.. .+-. -..-..++..++... ++..-+.-|.|.++|+..++
T Consensus 213 ~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g-~iy~itk~G~~~~~d~~t~~ 291 (1630)
T 1xi4_A 213 STLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETGT 291 (1630)
T ss_pred ceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccC-EEEEEecCceEEEEecccch
Confidence 112221111 1234888888653 11111 1110 112234677777777 88888999999999999443
No 316
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.33 E-value=0.04 Score=53.65 Aligned_cols=231 Identities=10% Similarity=0.127 Sum_probs=136.9
Q ss_pred cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeCCeEEEEecCCCC
Q 038533 31 GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSGDFLRLWDVGDSS 110 (337)
Q Consensus 31 ~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~~~v~vw~~~~~~ 110 (337)
.+.||.-. ...++|++++....... .....+|.-=+|-.+.. +-.++...|.-|++.+..
T Consensus 77 ~~iiALra-----g~~lQiFnl~~k~klks------~~~~e~VvfWkWis~~~---------l~lVT~~aVyHW~~~~~s 136 (1630)
T 1xi4_A 77 SKVIALKA-----GKTLQIFNIEMKSKMKA------HTMTDDVTFWKWISLNT---------VALVTDNAVYHWSMEGES 136 (1630)
T ss_pred cceEEEec-----CCeEEEeehHHhhhhcc------cccCCCceEEEecCCCe---------eEEEcCCeEEEeccCCCC
Confidence 45566554 68899998876543322 34456788888877664 444444499999997532
Q ss_pred ccceeeecCCCCCcccCCeeEEEeecCCCCeEEEee-------CCCcEEEEeCCCccchhhhhccCCceeEEEeC----C
Q 038533 111 IEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCS-------IDTTCTIWDIEKGVVETQLIAHDKEVYDICWG----E 179 (337)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-------~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~----~ 179 (337)
.+.+.+..|..-. ...|..-.-++ +.++++..+ -.|.+.+|..+.+ ..+.+.+|.+....+... +
T Consensus 137 -~P~k~fdR~~~L~-~~QIinY~~d~-~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F~~~~~~~~~~~ 212 (1630)
T 1xi4_A 137 -QPVKMFDRHSSLA-GCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEE 212 (1630)
T ss_pred -ccHHHHhcchhcc-cCeeEEeeeCC-CCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHhhhheeccCCCCCC
Confidence 5666666654322 14566667776 667666443 4588999998654 345667777666555554 2
Q ss_pred CcEEEEEcC---CCeEEEEECCCC-C-Cc------eee-ecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCC
Q 038533 180 ARVFASVSA---DGSVRIFDLRDK-E-HS------TII-YESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSP 247 (337)
Q Consensus 180 ~~~l~~~~~---dg~i~iwd~~~~-~-~~------~~~-~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~ 247 (337)
...+..+.. .+.+++-++... . .. ..+ +.......--.++..++ .-..+...+.-|. |++||+.+
T Consensus 213 ~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~-k~g~iy~itk~G~-~~~~d~~t- 289 (1630)
T 1xi4_A 213 STLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISE-KHDVVFLITKYGY-IHLYDLET- 289 (1630)
T ss_pred ceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEecc-ccCEEEEEecCce-EEEEeccc-
Confidence 334443333 378999998654 1 00 011 11111223345677777 5666777788888 99999999
Q ss_pred CCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCC
Q 038533 248 TLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 248 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 289 (337)
+.++..-+-...+|...+-++... =++.....|.|.--.++
T Consensus 290 ~~~i~~~ris~~~iF~~~~~~~~~-g~~~vnr~G~vl~v~v~ 330 (1630)
T 1xi4_A 290 GTCIYMNRISGETIFVTAPHEATA-GIIGVNRKGQVLSVCVE 330 (1630)
T ss_pred chhhhhccccCCceEEeccCCCCC-ceEEEcCCceEEEEEEc
Confidence 555554443444555444443333 24444466666555555
No 317
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.33 E-value=0.1 Score=48.46 Aligned_cols=267 Identities=7% Similarity=0.001 Sum_probs=140.3
Q ss_pred CCceeEEEEe-cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeCC
Q 038533 21 PYPLYAMAVC-GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSGD 99 (337)
Q Consensus 21 ~~~v~~~~~s-~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~~ 99 (337)
...|.+|.-. ..+|-.|+. +| +..| +........ .........|.++.-..++. +.+...+
T Consensus 21 ~n~V~~I~qD~~G~lWigT~----~G-L~ry--DG~~~~~~~--~~~~~~~~~i~~i~~d~~g~---------lWigT~~ 82 (758)
T 3ott_A 21 ASVVSCFLQDSEGLIWIGSN----KG-LFSY--DGYSTQQHF--TYGENNNTRIYCGVIIDNTY---------LYMGTDN 82 (758)
T ss_dssp CCCEEEEEECTTSCEEEEES----SC-EEEE--CSSCEEECS--CTTSTTSSCEEEEEEETTTE---------EEEEETT
T ss_pred cceEEEEEECCCCCEEEEEC----CC-cccc--CCCceEEEE--ccCCCCCceEEEEEEcCCCc---------EEEEeCC
Confidence 4679999888 777878884 55 4443 322211111 00012235688887777765 5554444
Q ss_pred eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhh--h-h-ccCCceeEE
Q 038533 100 FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQ--L-I-AHDKEVYDI 175 (337)
Q Consensus 100 ~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~--~-~-~~~~~v~~~ 175 (337)
-+..||..+.+... ..... ...|.++... ++ .|-.++.+ -|..+|..+++.... . . .....|.++
T Consensus 83 Gl~~yd~~~~~f~~--~~~~~-----~~~i~~i~~~--~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i 151 (758)
T 3ott_A 83 GILVYNYRADRYEQ--PETDF-----PTDVRTMALQ--GD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSI 151 (758)
T ss_dssp EEEEEETTTTEECC--CSCCC-----CSCEEEEEEE--TT-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEE
T ss_pred CeEEEeCCCCEEEC--cccCC-----CceEEEEEec--CC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEE
Confidence 78899988763221 11111 1457766542 44 45555555 688888876543211 0 1 123457888
Q ss_pred EeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCC--CCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeE
Q 038533 176 CWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESP--QPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVA 252 (337)
Q Consensus 176 ~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~ 252 (337)
... ++.+ ..++.+ .|..+|..+.+......... .....|.++...+ ++..|..++. ++ +..+|..+ .+ +.
T Consensus 152 ~~d~~g~l-Wigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~-~~~~lWigt~-~G-l~~~~~~~-~~-~~ 224 (758)
T 3ott_A 152 IRTKDNQI-YVGTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDT-TRQCVWIGTE-GY-LFQYFPST-GQ-IK 224 (758)
T ss_dssp EECTTCCE-EEEETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEET-TTTEEEEEEE-EE-EEEEETTT-TE-EE
T ss_pred EEcCCCCE-EEEeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEEC-CCCEEEEEEC-CC-CeEEcCCC-Ce-EE
Confidence 777 4554 445554 47788877654221111110 0123477887776 5665555554 45 99999875 32 22
Q ss_pred Eee-cccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEE
Q 038533 253 ELE-RHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAI 326 (337)
Q Consensus 253 ~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 326 (337)
.+. .....|.++...++|. |..|+. +-+.+++........-.........-....|.++....+|..++.+
T Consensus 225 ~~~~l~~~~i~~i~~d~~g~--lWigT~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT 296 (758)
T 3ott_A 225 QTEAFHNNSIKSLALDGNGD--LLAGTD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLGT 296 (758)
T ss_dssp EEEEEEEEEEEEEEECTTCC--EEEEET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEEEE
T ss_pred eccCCCCCeEEEEEEcCCCC--EEEEeC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEe
Confidence 221 1234688888888886 444554 4577787662211000000000000123458888887777644443
No 318
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.26 E-value=0.1 Score=47.04 Aligned_cols=282 Identities=9% Similarity=0.022 Sum_probs=149.5
Q ss_pred CceeEEEEe--cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-
Q 038533 22 YPLYAMAVC--GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG- 98 (337)
Q Consensus 22 ~~v~~~~~s--~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~- 98 (337)
.....+++. ++.|..+.. ..+.|.+.+++........ ...-.....|++.|.+. .++.+-.
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~---~~~~I~v~~~dG~~~~~l~-----~~~l~~P~~Iavdp~~g--------~ly~tD~g 147 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDS---ETNRIEVSNLDGSLRKVLF-----WQELDQPRAIALDPSSG--------FMYWTDWG 147 (619)
T ss_dssp SCEEEEEEETTTTEEEEEET---TTTEEEEEETTSCSCEEEE-----CSSCSCCCCEEEETTTT--------EEEEEECS
T ss_pred CCcCeEEEEecCCEEEEEeC---CCCEEEEEECCCCCEEEEE-----eCCCCCCceEEEecCCC--------eEEEeccC
Confidence 456778887 555555442 3788888777654433222 12334578899998755 2666653
Q ss_pred -C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCceeEEE
Q 038533 99 -D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDIC 176 (337)
Q Consensus 99 -~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~ 176 (337)
. .|...+++... ........- .....+++++.++.++++=...+.|...|+..........+......+++
T Consensus 148 ~~~~I~r~~~dG~~--~~~l~~~~~-----~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~ 220 (619)
T 3s94_A 148 EVPKIERAGMDGSS--RFIIINSEI-----YWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALT 220 (619)
T ss_dssp SSCEEEEEETTSCS--CEEEECSSC-----SSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEE
T ss_pred CCCEEEEEECCCCc--eEEEEeCCC-----CCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEE
Confidence 2 67666766542 222222211 45788999983445555555677899999865443222221223345677
Q ss_pred eCCCcEEEEEcCCCeEEEEECCCCCCceeeecC---------------C-C------CCCCceEEEe-----------ec
Q 038533 177 WGEARVFASVSADGSVRIFDLRDKEHSTIIYES---------------P-Q------PDTPLLRLAW-----------NK 223 (337)
Q Consensus 177 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---------------~-~------~~~~i~~~~~-----------~~ 223 (337)
+..+.++++-...+.|...|..+++....+... + . .++.+..+++ +|
T Consensus 221 ~~~~~ly~td~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~ 300 (619)
T 3s94_A 221 LFEDILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACP 300 (619)
T ss_dssp ESSSEEEEECTTTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECC
T ss_pred EeCCEEEEecCCCCEEEEEECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCC
Confidence 765556666666788999998766533222110 0 0 0011111222 11
Q ss_pred C------C--------CcEEEEEEecCCEEEEEECCCCCCCeEEee-cccceeeEEEeCCCCCCeEEEEcCCCcEEEEeC
Q 038533 224 Q------D--------LRYMATILMDSNKVVILDIRSPTLPVAELE-RHRACVNAIAWAPQSRRHICSVGDDSQAFIWEL 288 (337)
Q Consensus 224 ~------~--------~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~ 288 (337)
. + ..+|+.+ ..+. |+..++.........+. ..-..+..++|.+.+..++++-...+.|+.+++
T Consensus 301 ~g~~l~~d~~~C~~~~~~~Ll~~-~~~~-i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~ 378 (619)
T 3s94_A 301 TGVKLLENGKTCKDGATELLLLA-RRTD-LRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFI 378 (619)
T ss_dssp TTCCBCTTSSCBCSSCSEEEEEE-ESSC-EEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred chheecccCcccCCCCceEEEEE-cccc-eEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEc
Confidence 0 1 1233333 3444 77777765332111221 112356789999866535556566788988888
Q ss_pred CCCCCCCCCCCCceee-eeCCCceeEEEEccCCCceEEEE-cCCcEEEEe
Q 038533 289 PLPPVAGPNGIDPMSM-YSAGSEINQLQWSPAQPDWLAIA-FSNKMQLLK 336 (337)
Q Consensus 289 ~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iw~ 336 (337)
. .. ....+ ...-.....+++.+.+..|+.+. ..+.|.+.+
T Consensus 379 ~--g~------~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~ 420 (619)
T 3s94_A 379 D--GS------GSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTR 420 (619)
T ss_dssp T--SC------SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred C--CC------ccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEe
Confidence 7 21 12222 22234567888887555555554 456666554
No 319
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.23 E-value=0.039 Score=45.81 Aligned_cols=141 Identities=13% Similarity=0.103 Sum_probs=78.3
Q ss_pred CCCeEEEEECCCC--CCceeeecC---CCCCCCceEEEeecC-CC-cEEEEEEec--CCEEEEEECCCCCCCe---EEee
Q 038533 188 ADGSVRIFDLRDK--EHSTIIYES---PQPDTPLLRLAWNKQ-DL-RYMATILMD--SNKVVILDIRSPTLPV---AELE 255 (337)
Q Consensus 188 ~dg~i~iwd~~~~--~~~~~~~~~---~~~~~~i~~~~~~~~-~~-~~l~~~~~d--~~~i~i~d~~~~~~~~---~~~~ 255 (337)
.+|.|.++|+.+. +........ .........+.+.+. ++ .+|+++... +.+|.+|++....... ..+.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 6899999999743 221111111 011235566776551 23 245555433 3458888877543322 2232
Q ss_pred cc-cceeeEEEeCCCCCCeEEEEc---CC------------CcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccC
Q 038533 256 RH-RACVNAIAWAPQSRRHICSVG---DD------------SQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPA 319 (337)
Q Consensus 256 ~~-~~~v~~~~~~~~~~~~l~~~~---~d------------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 319 (337)
+. -...+.+++.++|. +.++.. .| ..=++|.+..++ .......-...+.++|+||
T Consensus 161 g~~~~~pND~~v~~~G~-fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~--------~~~~~~~l~~pNGia~spD 231 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPND--------VRVVAEGFDFANGINISPD 231 (355)
T ss_dssp CTTCSSEEEEEEEETTE-EEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTC--------CEEEEEEESSEEEEEECTT
T ss_pred cCCCCCCceEEEeCCCC-EEecCCcEeCCcccccchhhccCCccEEEEEECCe--------EEEeecCCcccCcceECCC
Confidence 21 23578899999998 666654 11 223455444111 2233333345799999999
Q ss_pred CCceEEEE-cCCcEEEEeC
Q 038533 320 QPDWLAIA-FSNKMQLLKV 337 (337)
Q Consensus 320 ~~~l~~~~-~d~~i~iw~l 337 (337)
++.++.+. ..+.|..|++
T Consensus 232 g~~lYvadt~~~~I~~~~~ 250 (355)
T 3sre_A 232 GKYVYIAELLAHKIHVYEK 250 (355)
T ss_dssp SSEEEEEEGGGTEEEEEEE
T ss_pred CCEEEEEeCCCCeEEEEEE
Confidence 98777665 4677877763
No 320
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.02 E-value=0.095 Score=42.30 Aligned_cols=191 Identities=10% Similarity=0.084 Sum_probs=97.4
Q ss_pred cceEEEeeeec-cCcceEEEEEecCCCc-ceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeC-C------eE
Q 038533 31 GQRIAVGSFIE-DYTNRVDVVSFEPESL-SIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSG-D------FL 101 (337)
Q Consensus 31 ~~~la~g~~~~-~~d~~i~i~~~~~~~~-~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~------~v 101 (337)
+.+++.|+... ...+.+.+|+...... .......+ .....-.++... ++. +++.|+ + .+
T Consensus 63 ~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~--p~~r~~~~~~~~-~~~---------lyv~GG~~~~~~~~~~ 130 (301)
T 2vpj_A 63 DRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPM--NVRRGLAGATTL-GDM---------IYVSGGFDGSRRHTSM 130 (301)
T ss_dssp TEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCC--SSCCBSCEEEEE-TTE---------EEEECCBCSSCBCCEE
T ss_pred CEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCC--CCCccceeEEEE-CCE---------EEEEcccCCCcccceE
Confidence 67777777511 1124566666554430 02221122 111111222222 455 777765 1 68
Q ss_pred EEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCC-----CcEEEEeCCCccch--hhhhccCCceeE
Q 038533 102 RLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSID-----TTCTIWDIEKGVVE--TQLIAHDKEVYD 174 (337)
Q Consensus 102 ~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-----g~i~v~d~~~~~~~--~~~~~~~~~v~~ 174 (337)
.+||+.+.+...+..+.... ..-..+.+ ++.+++.|+.+ ..+.+||+.+.+-. ..+.. ...-.+
T Consensus 131 ~~~d~~~~~W~~~~~~p~~r-----~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~~~ 201 (301)
T 2vpj_A 131 ERYDPNIDQWSMLGDMQTAR-----EGAGLVVA---SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMAT-KRSGAG 201 (301)
T ss_dssp EEEETTTTEEEEEEECSSCC-----BSCEEEEE---TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSS-CCBSCE
T ss_pred EEEcCCCCeEEECCCCCCCc-----ccceEEEE---CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCc-ccccce
Confidence 89999887655544443221 11222222 66788888754 45889998776522 11211 111112
Q ss_pred EEeCCCcEEEEEcCC-----CeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecC----CEEEEEECC
Q 038533 175 ICWGEARVFASVSAD-----GSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS----NKVVILDIR 245 (337)
Q Consensus 175 ~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~----~~i~i~d~~ 245 (337)
++..++.+++.|+.+ ..+.+||+.+.+-... ...+........+.+ ++.+++.|+.++ ..+.+||+.
T Consensus 202 ~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~ 277 (301)
T 2vpj_A 202 VALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTV-TSMTTPRCYVGATVL---RGRLYAIAGYDGNSLLSSIECYDPI 277 (301)
T ss_dssp EEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEE-CCCSSCCBSCEEEEE---TTEEEEECCBCSSSBEEEEEEEETT
T ss_pred EEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEEC-CCCCCcccceeEEEE---CCEEEEEcCcCCCcccccEEEEcCC
Confidence 222267777777764 4688999987753322 111111122222322 667777777653 237888887
Q ss_pred C
Q 038533 246 S 246 (337)
Q Consensus 246 ~ 246 (337)
+
T Consensus 278 ~ 278 (301)
T 2vpj_A 278 I 278 (301)
T ss_dssp T
T ss_pred C
Confidence 6
No 321
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.00 E-value=0.11 Score=42.43 Aligned_cols=133 Identities=9% Similarity=-0.039 Sum_probs=70.4
Q ss_pred EEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCC--------CcEEEEeCCCcc--chhhhhccCC
Q 038533 101 LRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSID--------TTCTIWDIEKGV--VETQLIAHDK 170 (337)
Q Consensus 101 v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d--------g~i~v~d~~~~~--~~~~~~~~~~ 170 (337)
+.+||..+.+...+..+.... ..-..+.+ ++.+++.|+.+ ..+.+||+.+.+ .+..+....
T Consensus 69 ~~~~d~~~~~W~~~~~~p~~r-----~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r- 139 (315)
T 4asc_A 69 FLQFDHLDSEWLGMPPLPSPR-----CLFGLGEA---LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVV- 139 (315)
T ss_dssp EEEEETTTTEEEECCCBSSCE-----ESCEEEEE---TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCC-
T ss_pred eEEecCCCCeEEECCCCCcch-----hceeEEEE---CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcc-
Confidence 778888887544433332211 11112222 56777877743 458899988764 222221111
Q ss_pred ceeEEEeCCCcEEEEEcC-C-----CeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCC----EEE
Q 038533 171 EVYDICWGEARVFASVSA-D-----GSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSN----KVV 240 (337)
Q Consensus 171 ~v~~~~~~~~~~l~~~~~-d-----g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~----~i~ 240 (337)
.-.+++..++++++.|+. + ..+.+||+.+.+-.... ..+........+.+ ++++++.|+.++. .+.
T Consensus 140 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~ 215 (315)
T 4asc_A 140 YGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELA-PMQTARSLFGATVH---DGRIIVAAGVTDTGLTSSAE 215 (315)
T ss_dssp BSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECC-CCSSCCBSCEEEEE---TTEEEEEEEECSSSEEEEEE
T ss_pred cceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECC-CCCCchhceEEEEE---CCEEEEEeccCCCCccceEE
Confidence 112222235677777776 2 45889998876532221 11111112222322 6778888876543 388
Q ss_pred EEECCC
Q 038533 241 ILDIRS 246 (337)
Q Consensus 241 i~d~~~ 246 (337)
+||+.+
T Consensus 216 ~yd~~~ 221 (315)
T 4asc_A 216 VYSITD 221 (315)
T ss_dssp EEETTT
T ss_pred EEECCC
Confidence 899876
No 322
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.97 E-value=0.13 Score=42.85 Aligned_cols=233 Identities=8% Similarity=-0.015 Sum_probs=111.4
Q ss_pred CceeEEEEe-cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCC---CCcccCcCCccEEEEe
Q 038533 22 YPLYAMAVC-GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPN---SSSRKSSSNRHLLASS 97 (337)
Q Consensus 22 ~~v~~~~~s-~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~---~~~~~~~~~~~~l~~~ 97 (337)
.....++|. ...|.++.. .|.|.+++ +.....+.... ...........|+|+|+ +. .+.++-
T Consensus 31 ~~P~~ia~~pdG~l~V~e~----~g~I~~i~-~g~~~~~~~~~-v~~~g~~~p~gia~~pdf~~~g--------~lYv~~ 96 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIAER----PGRIRLFR-EGRLSTYAELS-VYHRGESGLLGLALHPRFPQEP--------YVYAYR 96 (352)
T ss_dssp SCEEEEEECTTSCEEEEET----TTEEEEEE-TTEEEEEEECC-CCCSTTCSEEEEEECTTTTTSC--------EEEEEE
T ss_pred CCceEEEEcCCCeEEEEeC----CCeEEEEE-CCCccEeecce-EeecCCCCceeEEECCCCCCCC--------EEEEEE
Confidence 456789998 333555554 78888876 32211111111 11223456789999998 33 255543
Q ss_pred C-------CeEEEEecCCCCc---c-ceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeC-------------CCcEEE
Q 038533 98 G-------DFLRLWDVGDSSI---E-PVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSI-------------DTTCTI 153 (337)
Q Consensus 98 ~-------~~v~vw~~~~~~~---~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-------------dg~i~v 153 (337)
. ..|..++...... + ....+....... .....++|.| ++.++++.+. .|.|.-
T Consensus 97 ~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~--h~~~~l~~~p-dG~Lyv~~G~~~~~~~~~d~~~~~g~I~r 173 (352)
T 2ism_A 97 TVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGL--HSGGRIAFGP-DGMLYVTTGEVYERELAQDLASLGGKILR 173 (352)
T ss_dssp EECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCC--CCCCCEEECT-TSCEEEECCCTTCGGGGGCTTCSSSEEEE
T ss_pred ecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCC--cCCceEEECC-CCCEEEEECCCCCCccccCCCCCceEEEE
Confidence 3 3577777664321 1 111132101111 2235899999 8877776542 256666
Q ss_pred EeCCCc------------cchhhhh-ccCCceeEEEeCC-CcEEEEEcC-CCeE------EEEECCCCCC----------
Q 038533 154 WDIEKG------------VVETQLI-AHDKEVYDICWGE-ARVFASVSA-DGSV------RIFDLRDKEH---------- 202 (337)
Q Consensus 154 ~d~~~~------------~~~~~~~-~~~~~v~~~~~~~-~~~l~~~~~-dg~i------~iwd~~~~~~---------- 202 (337)
++.... .....+. ++ .....++|++ ...|.++.. ...+ .+.-+..+..
T Consensus 174 i~~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~ 252 (352)
T 2ism_A 174 LTPEGEPAPGNPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRG 252 (352)
T ss_dssp ECTTSSBCTTCTTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCC
T ss_pred EcCCCCCCCCCcccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCC
Confidence 665421 0011111 12 2356788884 333443332 2221 1222222210
Q ss_pred -----ceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCC-----eEEeecccceeeEEEeCCCCCC
Q 038533 203 -----STIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLP-----VAELERHRACVNAIAWAPQSRR 272 (337)
Q Consensus 203 -----~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~ 272 (337)
....... .+......++|. ++.+++ +...+..|...++...... ...+......+..+++.|+|.
T Consensus 253 ~~~~~~~p~~~~-~~~~ap~G~~~~--~G~l~v-~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~- 327 (352)
T 2ism_A 253 NDPRYRDPLYFW-PQGFPPGNLAFF--RGDLYV-AGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGA- 327 (352)
T ss_dssp CCTTSCCCSEEC-TTCCCEEEEEEE--TTEEEE-EETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSC-
T ss_pred CCCCCcCCeEec-CCCCCCcceEEE--CCEEEE-EECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCc-
Confidence 0000111 111234566773 555544 4444444887777643321 122212235678999999997
Q ss_pred eEEEE
Q 038533 273 HICSV 277 (337)
Q Consensus 273 ~l~~~ 277 (337)
++++.
T Consensus 328 lyv~~ 332 (352)
T 2ism_A 328 LYVTT 332 (352)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55544
No 323
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.90 E-value=0.16 Score=43.02 Aligned_cols=220 Identities=13% Similarity=0.129 Sum_probs=137.5
Q ss_pred eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCceeEEEeCC
Q 038533 100 FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGE 179 (337)
Q Consensus 100 ~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~ 179 (337)
.|.|.|+..+.....+.+.. -+.-.+| ..+.+|.=. ...+.++|+++.+.+..+.- ...|.-=.|-+
T Consensus 49 ~vvIiDl~~~~~~~rrpi~A----------dsAIMnP-~~~iiALra-g~~lQiFnle~K~klks~~~-~e~VvfWkWis 115 (494)
T 1bpo_A 49 QVVIIDMNDPSNPIRRPISA----------DSAIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWIS 115 (494)
T ss_dssp EEEEEETTSTTSCEEEECCC----------SEEEECS-SSSCEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEEEE
T ss_pred eEEEEECCCCCcceeccccc----------ceeeeCC-CCcEEEEec-CCeEEEEchHHhhhhcceec-CCCceEEEecC
Confidence 89999998875333333333 1455677 666666654 78999999999887776653 44676667776
Q ss_pred CcEEEEEcCCCeEEEEECCCCCCceeeecCCC--CCCCceEEEeecCCCcEEEEEEe-------cCCEEEEEECCCCCCC
Q 038533 180 ARVFASVSADGSVRIFDLRDKEHSTIIYESPQ--PDTPLLRLAWNKQDLRYMATILM-------DSNKVVILDIRSPTLP 250 (337)
Q Consensus 180 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~l~~~~~-------d~~~i~i~d~~~~~~~ 250 (337)
.+.|+..+. ..|+-|++.....+..++..+. ....|..-.-++ +.++++..+- .|. +.+|..+. ..
T Consensus 116 ~~~l~lVT~-taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~-~~kW~~l~GI~~~~~~v~G~-mQLYS~er--~~ 190 (494)
T 1bpo_A 116 LNTVALVTD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDA-KQKWLLLTGISAQQNRVVGA-MQLYSVDR--KV 190 (494)
T ss_dssp TTEEEEECS-SEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECT-TSSEEEEEEEEEETTEEEEE-EEEEESTT--CC
T ss_pred CCeEEEEcC-CeeEEecccCCCCchhheecchhcccceEEEEEECC-CCCeEEEEeecccCCcccce-EEEeeccc--cc
Confidence 677777664 5799999986554444443311 235566677777 7888776543 244 88999875 44
Q ss_pred eEEeecccceeeEEEeCCCC--CCeEEEEcC---CCcEEEEeCCCC-CCCCCCCCCcee-eee---CCCceeEEEEccCC
Q 038533 251 VAELERHRACVNAIAWAPQS--RRHICSVGD---DSQAFIWELPLP-PVAGPNGIDPMS-MYS---AGSEINQLQWSPAQ 320 (337)
Q Consensus 251 ~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~---dg~i~iw~~~~~-~~~~~~~~~~~~-~~~---~~~~v~~~~~~~~~ 320 (337)
-+.+.+|......+...-+. ..+++.+.. .++++|-++..+ ....+...+... .+. ..+-..++..++..
T Consensus 191 sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~ky 270 (494)
T 1bpo_A 191 SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKH 270 (494)
T ss_dssp EEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTT
T ss_pred cchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccC
Confidence 67788887776665554221 114444443 278999999743 111111111111 111 13345677777776
Q ss_pred CceEEEEcCCcEEEEeC
Q 038533 321 PDWLAIAFSNKMQLLKV 337 (337)
Q Consensus 321 ~~l~~~~~d~~i~iw~l 337 (337)
..++....-|-++++|+
T Consensus 271 gviyviTK~G~i~lyDl 287 (494)
T 1bpo_A 271 DVVFLITKYGYIHLYDL 287 (494)
T ss_dssp TEEEEEETTSEEEEEET
T ss_pred CEEEEEecCceEEEEec
Confidence 66777788888888875
No 324
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.87 E-value=0.13 Score=41.52 Aligned_cols=141 Identities=12% Similarity=0.037 Sum_probs=75.2
Q ss_pred EEEEeC-C------eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCC-------CcEEEEeCCC
Q 038533 93 LLASSG-D------FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSID-------TTCTIWDIEK 158 (337)
Q Consensus 93 ~l~~~~-~------~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-------g~i~v~d~~~ 158 (337)
+++.|+ + .+.+||+.+.+...+..+.... .....+.+ ++.+++.|+.+ ..+.+||+.+
T Consensus 111 iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-----~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~yd~~~ 182 (302)
T 2xn4_A 111 LYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRR-----SSVGVGVV---GGLLYAVGGYDVASRQCLSTVECYNATT 182 (302)
T ss_dssp EEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCC-----BSCEEEEE---TTEEEEECCEETTTTEECCCEEEEETTT
T ss_pred EEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcc-----cCceEEEE---CCEEEEEeCCCCCCCccccEEEEEeCCC
Confidence 666654 2 6788998887554443333221 12222222 56777877643 3588999877
Q ss_pred ccc--hhhhhccCCceeEEEeCCCcEEEEEcCC-----CeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEE
Q 038533 159 GVV--ETQLIAHDKEVYDICWGEARVFASVSAD-----GSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMAT 231 (337)
Q Consensus 159 ~~~--~~~~~~~~~~v~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 231 (337)
.+- +..+.... .-.+++..++.+++.|+.+ ..+.+||+.+.+-.... ..+........+.+ ++.+++.
T Consensus 183 ~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-~~~~~r~~~~~~~~---~~~i~v~ 257 (302)
T 2xn4_A 183 NEWTYIAEMSTRR-SGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVA-DMNMCRRNAGVCAV---NGLLYVV 257 (302)
T ss_dssp TEEEEECCCSSCC-BSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEEC-CCSSCCBSCEEEEE---TTEEEEE
T ss_pred CcEEECCCCcccc-ccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCC-CCCCccccCeEEEE---CCEEEEE
Confidence 642 22221111 1122333367788887764 36889999876533221 11111111222222 6677777
Q ss_pred EEecCC----EEEEEECCC
Q 038533 232 ILMDSN----KVVILDIRS 246 (337)
Q Consensus 232 ~~~d~~----~i~i~d~~~ 246 (337)
|+.++. .+.+||+.+
T Consensus 258 GG~~~~~~~~~v~~yd~~~ 276 (302)
T 2xn4_A 258 GGDDGSCNLASVEYYNPTT 276 (302)
T ss_dssp CCBCSSSBCCCEEEEETTT
T ss_pred CCcCCCcccccEEEEcCCC
Confidence 776532 278888876
No 325
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.76 E-value=0.19 Score=41.75 Aligned_cols=90 Identities=9% Similarity=-0.047 Sum_probs=48.8
Q ss_pred eEEEEecCCCCccceeeec-CCCCCcccCCeeEEEeecCCCCeEEEeeCC------------------------------
Q 038533 100 FLRLWDVGDSSIEPVAVLN-NSKSSEFCAPLTSFDWNEIEPKRIGTCSID------------------------------ 148 (337)
Q Consensus 100 ~v~vw~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d------------------------------ 148 (337)
.+.+||+.+.+...+..+. ... ....++. . ++.+++.|+.+
T Consensus 87 ~v~~yd~~~~~W~~~~~~~p~~r-----~~~~~~~--~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (357)
T 2uvk_A 87 DVHKYNPKTNSWVKLMSHAPMGM-----AGHVTFV--H-NGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFD 158 (357)
T ss_dssp CEEEEETTTTEEEECSCCCSSCC-----SSEEEEE--E-TTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHS
T ss_pred cEEEEeCCCCcEEECCCCCCccc-----ccceEEE--E-CCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhcc
Confidence 5888998887554443333 111 1222233 2 67888888754
Q ss_pred ---------CcEEEEeCCCccc--hhhhhccCCceeEEEeCCCcEEEEEcC------CCeEEEEEC
Q 038533 149 ---------TTCTIWDIEKGVV--ETQLIAHDKEVYDICWGEARVFASVSA------DGSVRIFDL 197 (337)
Q Consensus 149 ---------g~i~v~d~~~~~~--~~~~~~~~~~v~~~~~~~~~~l~~~~~------dg~i~iwd~ 197 (337)
..+.+||+.+.+- +..+......-.+++..++.+++.|+. ...+..||+
T Consensus 159 ~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 159 KKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp SCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEe
Confidence 5789999877652 211111111112333336677777764 235777877
No 326
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.60 E-value=0.22 Score=40.42 Aligned_cols=141 Identities=13% Similarity=0.104 Sum_probs=76.0
Q ss_pred EEEEeC-------CeEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCC-----CcEEEEeCCCcc
Q 038533 93 LLASSG-------DFLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSID-----TTCTIWDIEKGV 160 (337)
Q Consensus 93 ~l~~~~-------~~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-----g~i~v~d~~~~~ 160 (337)
+++.|+ +.+.+||..+.+...+..+.... ..-..+.+ ++.+++.|+.+ ..+.+||+.+.+
T Consensus 124 iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-----~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 195 (308)
T 1zgk_A 124 IYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRR-----IGVGVAVL---NRLLYAVGGFDGTNRLNSAECYYPERNE 195 (308)
T ss_dssp EEEECCEETTEECCCEEEEETTTTEEEECCCCSSCC-----BSCEEEEE---TTEEEEECCBCSSCBCCCEEEEETTTTE
T ss_pred EEEEcCCCCCcccccEEEECCCCCeEeECCCCCccc-----cceEEEEE---CCEEEEEeCCCCCCcCceEEEEeCCCCe
Confidence 777765 16889999887544443333221 12222222 56788888754 458899987765
Q ss_pred c--hhhhhccCCceeEEEeCCCcEEEEEcCC-----CeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEE
Q 038533 161 V--ETQLIAHDKEVYDICWGEARVFASVSAD-----GSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATIL 233 (337)
Q Consensus 161 ~--~~~~~~~~~~v~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~ 233 (337)
- +..+.... .-.+++..++.+++.|+.+ ..+.+||+.+.+-.... ..+...... ++... ++.+++.|+
T Consensus 196 W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~-~~~~~--~~~i~v~GG 270 (308)
T 1zgk_A 196 WRMITAMNTIR-SGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVA-PMKHRRSAL-GITVH--QGRIYVLGG 270 (308)
T ss_dssp EEECCCCSSCC-BSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECC-CCSSCCBSC-EEEEE--TTEEEEECC
T ss_pred EeeCCCCCCcc-ccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECC-CCCCCccce-EEEEE--CCEEEEEcC
Confidence 2 11111111 1122222367777777764 45899999876532221 111111122 22222 667777777
Q ss_pred ecCC----EEEEEECCC
Q 038533 234 MDSN----KVVILDIRS 246 (337)
Q Consensus 234 ~d~~----~i~i~d~~~ 246 (337)
.++. .+.+||+.+
T Consensus 271 ~~~~~~~~~v~~yd~~~ 287 (308)
T 1zgk_A 271 YDGHTFLDSVECYDPDT 287 (308)
T ss_dssp BCSSCBCCEEEEEETTT
T ss_pred cCCCcccceEEEEcCCC
Confidence 5432 377888876
No 327
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.59 E-value=0.16 Score=42.18 Aligned_cols=140 Identities=11% Similarity=-0.028 Sum_probs=73.5
Q ss_pred EEEEeC-C--eEEEEecCC--CCccceeeec-CCCCCcccCCeeEEEeecCCCCeEEEeeC-C---------CcEEEEeC
Q 038533 93 LLASSG-D--FLRLWDVGD--SSIEPVAVLN-NSKSSEFCAPLTSFDWNEIEPKRIGTCSI-D---------TTCTIWDI 156 (337)
Q Consensus 93 ~l~~~~-~--~v~vw~~~~--~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-d---------g~i~v~d~ 156 (337)
+++.|+ + .+.+||+.+ .+...+..+. ... ..-..+.+ ++.+++.|+. + ..+.+||+
T Consensus 22 iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R-----~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~v~~yd~ 93 (357)
T 2uvk_A 22 VYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPR-----DQATSAFI---DGNLYVFGGIGKNSEGLTQVFNDVHKYNP 93 (357)
T ss_dssp EEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCC-----BSCEEEEE---TTEEEEECCEEECTTSCEEECCCEEEEET
T ss_pred EEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcC-----ccceEEEE---CCEEEEEcCCCCCCCccceeeccEEEEeC
Confidence 767766 2 899999874 4433333333 111 11122222 5678888876 2 46889998
Q ss_pred CCccc--hhhhhccCCceeEEEeCCCcEEEEEcCC---------------------------------------CeEEEE
Q 038533 157 EKGVV--ETQLIAHDKEVYDICWGEARVFASVSAD---------------------------------------GSVRIF 195 (337)
Q Consensus 157 ~~~~~--~~~~~~~~~~v~~~~~~~~~~l~~~~~d---------------------------------------g~i~iw 195 (337)
.+.+- +..+......-.+++..++++++.|+.+ ..+.+|
T Consensus 94 ~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~y 173 (357)
T 2uvk_A 94 KTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSF 173 (357)
T ss_dssp TTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEE
T ss_pred CCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEE
Confidence 87652 2222101111111222367788888765 478899
Q ss_pred ECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEec------CCEEEEEEC
Q 038533 196 DLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMD------SNKVVILDI 244 (337)
Q Consensus 196 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d------~~~i~i~d~ 244 (337)
|+.+.+-.... ..+.....-.+++.. ++.+++.|+.+ .. +..||+
T Consensus 174 d~~~~~W~~~~-~~p~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~-v~~~d~ 224 (357)
T 2uvk_A 174 DPSTQQWSYAG-ESPWYGTAGAAVVNK--GDKTWLINGEAKPGLRTDA-VFELDF 224 (357)
T ss_dssp ETTTTEEEEEE-ECSSCCCBSCEEEEE--TTEEEEECCEEETTEECCC-EEEEEC
T ss_pred eCCCCcEEECC-CCCCCCcccccEEEE--CCEEEEEeeecCCCcccCc-eEEEEe
Confidence 99877543332 111111111233332 56677776643 23 777887
No 328
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.56 E-value=0.15 Score=38.89 Aligned_cols=181 Identities=7% Similarity=-0.031 Sum_probs=91.0
Q ss_pred CCCeEEEeeCCCcEEEEeCCCccc--h-hhh--hcc--CCceeEEEeCCCcEEEEEcCCCeEEEEECCCCCCcee-----
Q 038533 138 EPKRIGTCSIDTTCTIWDIEKGVV--E-TQL--IAH--DKEVYDICWGEARVFASVSADGSVRIFDLRDKEHSTI----- 205 (337)
Q Consensus 138 ~~~~l~~~~~dg~i~v~d~~~~~~--~-~~~--~~~--~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~----- 205 (337)
...+|.+..+| +++.=.+.++.. - ... .+. =..+..++|+|+..|..+ .+|.+.-.+..+.....-
T Consensus 3 ~~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t 80 (236)
T 1tl2_A 3 GESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAK 80 (236)
T ss_dssp CCCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCE
T ss_pred cceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE-eCCeEEEECCCCCCccccccccc
Confidence 34566666666 666555544431 1 011 122 246789999953345555 778776666544322111
Q ss_pred eecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCC-e----EEe-ecccceeeEEEeCCCCCCeEEEEcC
Q 038533 206 IYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLP-V----AEL-ERHRACVNAIAWAPQSRRHICSVGD 279 (337)
Q Consensus 206 ~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~-~----~~~-~~~~~~v~~~~~~~~~~~~l~~~~~ 279 (337)
......- ....++.|.| ++.+.++ .|+. |+-++..+...- . ..+ ..--..+..|.+.|+|. +.+..
T Consensus 81 ~IG~~Gw-~~F~a~~fD~-~G~LYav--~dG~-iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~-Lyav~-- 152 (236)
T 1tl2_A 81 KIGNGGW-NQFQFLFFDP-NGYLYAV--SKDK-LYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY-LYAVH-- 152 (236)
T ss_dssp EEECSCG-GGCSEEEECT-TSCEEEE--ETTE-EEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC-EEEEE--
T ss_pred Eeccccc-ccceEEEECC-CCCEEEe--CCCE-EEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce-EEEEe--
Confidence 1100001 1247888988 8887777 5676 877765332211 0 111 11114679999999997 44444
Q ss_pred CCcEEEEeCCCCCCCCCCCCCceeeee--CCCceeEEEEccCCCceEEEEcCCcE
Q 038533 280 DSQAFIWELPLPPVAGPNGIDPMSMYS--AGSEINQLQWSPAQPDWLAIAFSNKM 332 (337)
Q Consensus 280 dg~i~iw~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i 332 (337)
|+.+. ....|......-.......+ .-..-..+.|.|++. |.++. ++.+
T Consensus 153 dg~ly--r~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~-l~~v~-~g~~ 203 (236)
T 1tl2_A 153 GQQFY--KALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGT-LFGVQ-GGKF 203 (236)
T ss_dssp TTEEE--EECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSC-EEEEE-TTEE
T ss_pred CCcEE--ecCCCCCCCcccccccceeccCCcceEEEEEECCCCc-EEEEe-CCeE
Confidence 77743 33322211100000011212 222345577999985 55555 6644
No 329
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.56 E-value=0.24 Score=40.31 Aligned_cols=134 Identities=10% Similarity=0.023 Sum_probs=71.7
Q ss_pred eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeC------CCcEEEEeCCCccc--hhhhhccCCc
Q 038533 100 FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSI------DTTCTIWDIEKGVV--ETQLIAHDKE 171 (337)
Q Consensus 100 ~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~------dg~i~v~d~~~~~~--~~~~~~~~~~ 171 (337)
.+.+||..+.+.+.+..+.... ..-..+.+ ++.+++.|+. -..+.+||+.+.+- +..+.. ...
T Consensus 118 ~~~~~d~~~~~W~~~~~~p~~r-----~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~ 188 (315)
T 4asc_A 118 SVMCYDRLSFKWGESDPLPYVV-----YGHTVLSH---MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQT-ARS 188 (315)
T ss_dssp CEEEEETTTTEEEECCCCSSCC-----BSCEEEEE---TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSS-CCB
T ss_pred eEEEECCCCCcEeECCCCCCcc-----cceeEEEE---CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCC-chh
Confidence 6889999887554443333221 11222222 6678888876 24689999887642 222211 111
Q ss_pred eeEEEeCCCcEEEEEcCCC-----eEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecC----------
Q 038533 172 VYDICWGEARVFASVSADG-----SVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS---------- 236 (337)
Q Consensus 172 v~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~---------- 236 (337)
-.+++..++++++.|+.++ .+.+||+.+.+-.... ..+........+.+ ++.+++.|+.++
T Consensus 189 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~---~~~l~v~GG~~~~~~~~~~~~~ 264 (315)
T 4asc_A 189 LFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFE-AFPQERSSLSLVSL---VGTLYAIGGFATLETESGELVP 264 (315)
T ss_dssp SCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEEC-CCSSCCBSCEEEEE---TTEEEEEEEEEEEECTTSCEEE
T ss_pred ceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECC-CCCCcccceeEEEE---CCEEEEECCccccCcCCccccc
Confidence 1222223677888887654 4888999877533221 11111122222332 667777777642
Q ss_pred ---CEEEEEECCC
Q 038533 237 ---NKVVILDIRS 246 (337)
Q Consensus 237 ---~~i~i~d~~~ 246 (337)
..+.+||+.+
T Consensus 265 ~~~~~v~~yd~~~ 277 (315)
T 4asc_A 265 TELNDIWRYNEEE 277 (315)
T ss_dssp EEEEEEEEEETTT
T ss_pred cccCcEEEecCCC
Confidence 1267778765
No 330
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.37 E-value=0.15 Score=38.84 Aligned_cols=151 Identities=5% Similarity=-0.053 Sum_probs=82.6
Q ss_pred CCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCc--------eeEEEeC-CCcEEEEEcCCCeEEEEEC
Q 038533 127 APLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKE--------VYDICWG-EARVFASVSADGSVRIFDL 197 (337)
Q Consensus 127 ~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~--------v~~~~~~-~~~~l~~~~~dg~i~iwd~ 197 (337)
..+..++|+| ++.+.++ .+|.+.-.+..+.....-+.. ... ..++.|. ++.+.++ .||.|.-++-
T Consensus 41 ~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s-~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 41 SNFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGR-AKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp TTCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHH-CEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESC
T ss_pred ccceeEEECC-CccEEEE--eCCeEEEECCCCCCccccccc-ccEecccccccceEEEECCCCCEEEe--CCCEEEEeCC
Confidence 4677999999 9887777 678887777655432221211 222 3678888 4555555 5698887775
Q ss_pred CCCCCceeeecC----CCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCC-----CeEEee-cccceeeEEEeC
Q 038533 198 RDKEHSTIIYES----PQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTL-----PVAELE-RHRACVNAIAWA 267 (337)
Q Consensus 198 ~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~-----~~~~~~-~~~~~v~~~~~~ 267 (337)
.+.....-+... ...=..+..|.|.| ++.+.++. ++. ++-........ ....+- ..-...+-+.|.
T Consensus 115 P~~~~~~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~--dg~-lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~ 190 (236)
T 1tl2_A 115 PQSDTDNWIARATEVGSGGWSGFKFLFFHP-NGYLYAVH--GQQ-FYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFS 190 (236)
T ss_dssp CCSTTCCHHHHSEEEECSSGGGEEEEEECT-TSCEEEEE--TTE-EEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEEC
T ss_pred CcCCCCceeccccEeccCCCCceEEEEECC-CceEEEEe--CCc-EEecCCCCCCCcccccccceeccCCcceEEEEEEC
Confidence 433221111110 00113578899998 88877776 665 43322211010 001111 122233456799
Q ss_pred CCCCCeEEEEcCCCcEEEEeCCCCC
Q 038533 268 PQSRRHICSVGDDSQAFIWELPLPP 292 (337)
Q Consensus 268 ~~~~~~l~~~~~dg~i~iw~~~~~~ 292 (337)
|++. +.++. +| ++|....++
T Consensus 191 ~~G~-l~~v~--~g--~~Y~~~~p~ 210 (236)
T 1tl2_A 191 SVGT-LFGVQ--GG--KFYEDYPPS 210 (236)
T ss_dssp TTSC-EEEEE--TT--EEEEESCCC
T ss_pred CCCc-EEEEe--CC--eEEecCCcc
Confidence 9987 55555 66 566666333
No 331
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.91 E-value=0.6 Score=38.75 Aligned_cols=144 Identities=8% Similarity=-0.045 Sum_probs=77.4
Q ss_pred CCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCcc-chhhh---hccCCceeEEEeCC----CcEEEEEcC----C----C
Q 038533 127 APLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGV-VETQL---IAHDKEVYDICWGE----ARVFASVSA----D----G 190 (337)
Q Consensus 127 ~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~-~~~~~---~~~~~~v~~~~~~~----~~~l~~~~~----d----g 190 (337)
.....++|.| ++.+++ +..+|.|+++|. +++ .+..+ .........|++++ +..|+.+.. + .
T Consensus 29 ~~P~~ia~~p-dG~l~V-~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 29 EVPWSIAPLG-GGRYLV-TERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp SCEEEEEEEE-TTEEEE-EETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCeEEEEcC-CCeEEE-EeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 4567899998 887555 466799999973 444 22111 11234578999994 355554433 2 5
Q ss_pred eEEEEECCCCC--C--ceeeec-C-CCCCCCceEEEeecCCCcEEEEEEec-------------CCEEEEEECCCCC---
Q 038533 191 SVRIFDLRDKE--H--STIIYE-S-PQPDTPLLRLAWNKQDLRYMATILMD-------------SNKVVILDIRSPT--- 248 (337)
Q Consensus 191 ~i~iwd~~~~~--~--~~~~~~-~-~~~~~~i~~~~~~~~~~~~l~~~~~d-------------~~~i~i~d~~~~~--- 248 (337)
.|..|+..... . ...+.. . .........+.|.| ++.+.++.+.. +. |.-++....-
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G~-I~ri~~dG~~p~~ 183 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYITTGDAADPRLAQDLSSLAGK-ILRVDEEGRPPAD 183 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT-TSCEEEECCCTTCGGGGTCTTCCSSE-EEEECTTSCCCTT
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECC-CCcEEEEECCCCCCccccCCCCCCeE-EEEEcCCCCCCCC
Confidence 67778776541 1 111111 1 11112346799999 88766664332 23 5555543210
Q ss_pred C---CeEEe-ecccceeeEEEeCC-CCCCeEEEE
Q 038533 249 L---PVAEL-ERHRACVNAIAWAP-QSRRHICSV 277 (337)
Q Consensus 249 ~---~~~~~-~~~~~~v~~~~~~~-~~~~~l~~~ 277 (337)
. ....+ .++. ....++|+| ++. ++++-
T Consensus 184 npf~~~~i~a~G~r-np~Gla~d~~~g~-l~v~d 215 (354)
T 3a9g_A 184 NPFPNSPIWSYGHR-NPQGIDWHRASGV-MVATE 215 (354)
T ss_dssp SSSTTCCEEEECCS-CCCEEEECTTTCC-EEEEE
T ss_pred CCCCCCcEEEEccC-CcceEEEeCCCCC-EEEEe
Confidence 0 01111 2333 357899999 565 55543
No 332
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.85 E-value=0.52 Score=43.18 Aligned_cols=195 Identities=8% Similarity=0.006 Sum_probs=98.8
Q ss_pred EEEEeC---C---eEEEEecCCCCcccee-eecCCCCCcccCCeeEEEeecCCCCeEEEeeCCC------cEEEEeCCCc
Q 038533 93 LLASSG---D---FLRLWDVGDSSIEPVA-VLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDT------TCTIWDIEKG 159 (337)
Q Consensus 93 ~l~~~~---~---~v~vw~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg------~i~v~d~~~~ 159 (337)
+++.|| . .+.+||..+++...+. .+...........-..+.+.. ++.+++.|+.++ .+.+||..+.
T Consensus 400 iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~-~~~lyv~GG~~~~~~~~~dv~~yd~~t~ 478 (695)
T 2zwa_A 400 VFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISR-NNQLLLIGGRKAPHQGLSDNWIFDMKTR 478 (695)
T ss_dssp EEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETT-TTEEEEECCBSSTTCBCCCCEEEETTTT
T ss_pred EEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEcc-CCEEEEEcCCCCCCCccccEEEEeCCCC
Confidence 666666 1 6889999888654443 211000000001222333321 567788887543 5788998775
Q ss_pred c--chhhhhccCCceeEEEeCCCcEEEEEcCCC--eEEEEECCCCCCceeeec--CCCCCCCceEEEeecCCCcEEEEEE
Q 038533 160 V--VETQLIAHDKEVYDICWGEARVFASVSADG--SVRIFDLRDKEHSTIIYE--SPQPDTPLLRLAWNKQDLRYMATIL 233 (337)
Q Consensus 160 ~--~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~l~~~~ 233 (337)
+ .+..+......-.++.+.++.+++.|+.++ .+.+||..+..-...... .+.......++.+....+.+++.|+
T Consensus 479 ~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG 558 (695)
T 2zwa_A 479 EWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGG 558 (695)
T ss_dssp EEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECC
T ss_pred cEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECC
Confidence 4 222222111112223323678888887655 689999987653222110 1111222334555552366777776
Q ss_pred ec--C----CEEEEEECCCCCC--C--eEEeec---ccceeeEEEeCCCCCCeEEEEcC--------CCcEEEEeCC
Q 038533 234 MD--S----NKVVILDIRSPTL--P--VAELER---HRACVNAIAWAPQSRRHICSVGD--------DSQAFIWELP 289 (337)
Q Consensus 234 ~d--~----~~i~i~d~~~~~~--~--~~~~~~---~~~~v~~~~~~~~~~~~l~~~~~--------dg~i~iw~~~ 289 (337)
.+ + ..+..||+.+... . ...+.. ....-.+++...++. +++.|+. ...+.+||..
T Consensus 559 ~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~v~~yd~~ 634 (695)
T 2zwa_A 559 GFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRK-LLIVGGTSPSGLFDRTNSIISLDPL 634 (695)
T ss_dssp BCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTE-EEEECCBCSSCCCCTTTSEEEEETT
T ss_pred cCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCE-EEEECCccCCCCCCCCCeEEEEECC
Confidence 52 1 2488999987431 0 112211 111112223333355 7777774 3458889888
No 333
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.85 E-value=0.58 Score=38.03 Aligned_cols=134 Identities=12% Similarity=0.086 Sum_probs=68.8
Q ss_pred eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeC------CCcEEEEeCCCccc--hhhhhccCCc
Q 038533 100 FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSI------DTTCTIWDIEKGVV--ETQLIAHDKE 171 (337)
Q Consensus 100 ~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~------dg~i~v~d~~~~~~--~~~~~~~~~~ 171 (337)
.+.+||..+.+...+..+.... ..-..+. . ++.+++.|+. -..+.+||+.+.+- +..+.. ...
T Consensus 128 ~~~~yd~~~~~W~~~~~~p~~r-----~~~~~~~--~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~ 198 (318)
T 2woz_A 128 SVLCYDPVAAKWSEVKNLPIKV-----YGHNVIS--H-NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKT-PRS 198 (318)
T ss_dssp EEEEEETTTTEEEEECCCSSCE-----ESCEEEE--E-TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSS-CCB
T ss_pred eEEEEeCCCCCEeECCCCCCcc-----cccEEEE--E-CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCC-Ccc
Confidence 5888898887554443332211 1111222 2 6677788764 24589999887652 211111 111
Q ss_pred eeEEEeCCCcEEEEEcCC-----CeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecC----------
Q 038533 172 VYDICWGEARVFASVSAD-----GSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS---------- 236 (337)
Q Consensus 172 v~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~---------- 236 (337)
-.+++..++++++.|+.+ ..+.+||+.+.+-... ...+........+.+ ++.+++.|+.+.
T Consensus 199 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~~~~~ 274 (318)
T 2woz_A 199 MFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVM-TEFPQERSSISLVSL---AGSLYAIGGFAMIQLESKEFAP 274 (318)
T ss_dssp SCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEEC-CCCSSCCBSCEEEEE---TTEEEEECCBCCBC----CCBC
T ss_pred cceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEEC-CCCCCcccceEEEEE---CCEEEEECCeeccCCCCceecc
Confidence 122233367777777653 3577899887753322 111111112222222 567777766542
Q ss_pred ---CEEEEEECCC
Q 038533 237 ---NKVVILDIRS 246 (337)
Q Consensus 237 ---~~i~i~d~~~ 246 (337)
..+.+||+.+
T Consensus 275 ~~~~~v~~yd~~~ 287 (318)
T 2woz_A 275 TEVNDIWKYEDDK 287 (318)
T ss_dssp CBCCCEEEEETTT
T ss_pred ceeeeEEEEeCCC
Confidence 1277777765
No 334
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.57 E-value=0.75 Score=37.34 Aligned_cols=134 Identities=9% Similarity=0.024 Sum_probs=69.0
Q ss_pred EEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCC-------CcEEEEeCCCccch--hhhhccCCc
Q 038533 101 LRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSID-------TTCTIWDIEKGVVE--TQLIAHDKE 171 (337)
Q Consensus 101 v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-------g~i~v~d~~~~~~~--~~~~~~~~~ 171 (337)
+.+||..+.+...+..+.... .....+.+ ++.+++.|+.+ ..+.+||+.+.+-. ..+.... .
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r-----~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~ 150 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSAR-----CLFGLGEV---DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKV-Y 150 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCB-----CSCEEEEE---TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCE-E
T ss_pred EEEEeCCCCcEEECCCCCccc-----cccceEEE---CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcc-c
Confidence 677888877544433333221 11122222 56778888754 24788888776421 1111100 0
Q ss_pred eeEEEeCCCcEEEEEcC------CCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCC----EEEE
Q 038533 172 VYDICWGEARVFASVSA------DGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSN----KVVI 241 (337)
Q Consensus 172 v~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~----~i~i 241 (337)
-.+++..++.+++.|+. -..+.+||+.+.+-.... ..+........+.+ ++.+++.|+.++. .+.+
T Consensus 151 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~ 226 (318)
T 2woz_A 151 GHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLA-PMKTPRSMFGVAIH---KGKIVIAGGVTEDGLSASVEA 226 (318)
T ss_dssp SCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEEC-CCSSCCBSCEEEEE---TTEEEEEEEEETTEEEEEEEE
T ss_pred ccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECC-CCCCCcccceEEEE---CCEEEEEcCcCCCCccceEEE
Confidence 11222235677777764 235889999876532221 11111112222222 6777777775432 3778
Q ss_pred EECCCC
Q 038533 242 LDIRSP 247 (337)
Q Consensus 242 ~d~~~~ 247 (337)
||+.+.
T Consensus 227 yd~~~~ 232 (318)
T 2woz_A 227 FDLKTN 232 (318)
T ss_dssp EETTTC
T ss_pred EECCCC
Confidence 998763
No 335
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.28 E-value=1.1 Score=37.25 Aligned_cols=71 Identities=15% Similarity=0.160 Sum_probs=40.4
Q ss_pred ceeeEEEeCC-------CCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEE-cCC
Q 038533 259 ACVNAIAWAP-------QSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIA-FSN 330 (337)
Q Consensus 259 ~~v~~~~~~~-------~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~ 330 (337)
..+..++|.+ ++. ++++.-..+.|...+++..+ .... ...+......+..+++.|+|..+++.. .+|
T Consensus 271 ~ap~G~~~y~g~~fp~~~g~-l~v~~~~~~~v~~~~~~~~~---~~~~-~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g 345 (353)
T 2g8s_A 271 PAVSGMAFYNSDKFPQWQQK-LFIGALKDKDVIVMSVNGDK---VTED-GRILTDRGQRIRDVRTGPDGYLYVLTDESSG 345 (353)
T ss_dssp CCEEEEEEECCSSSGGGTTE-EEEEETTTTEEEEEEEETTE---EEEE-EEESGGGCCCEEEEEECTTSCEEEEECSTTE
T ss_pred cCcceeEEECCccCcccCCc-EEEEEccCCEEEEEEeCCCe---Eeee-EEcccCCCCceeEEEECCCCcEEEEEeCCCC
Confidence 3567778764 355 66666677778777776211 0000 001112345799999999997444433 344
Q ss_pred cEEEEe
Q 038533 331 KMQLLK 336 (337)
Q Consensus 331 ~i~iw~ 336 (337)
+||+
T Consensus 346 --~I~r 349 (353)
T 2g8s_A 346 --ELLK 349 (353)
T ss_dssp --EEEE
T ss_pred --EEEE
Confidence 4454
No 336
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.11 E-value=1.4 Score=37.90 Aligned_cols=105 Identities=14% Similarity=0.271 Sum_probs=57.6
Q ss_pred ceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCCceeeecCC------CCCCCceEEEeecCC---CcEEEEEEec-----
Q 038533 171 EVYDICWG-EARVFASVSADGSVRIFDLRDKEHSTIIYESP------QPDTPLLRLAWNKQD---LRYMATILMD----- 235 (337)
Q Consensus 171 ~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~------~~~~~i~~~~~~~~~---~~~l~~~~~d----- 235 (337)
....++|. +++++++-...+.|++++...++... +.... .....+..|+|+| + +..|+++...
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~-~~~~~~~~~~~~g~~Gllgia~~P-df~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKT-VFQVPEIVNDADGQNGLLGFAFHP-DFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE-EEECTTCCCCTTSSCSEEEEEECT-TTTTSCEEEEEEEEECTTC
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeE-EecCCccccccCCCCceeEEEECC-CcCcCCEEEEEEeccccCC
Confidence 46789998 56655554444578888865544322 21111 1245678999998 4 4555544431
Q ss_pred -------CCEEEEEECCCCC------CCeE-Eeec-ccceeeEEEeCCCCCCeEEEEc
Q 038533 236 -------SNKVVILDIRSPT------LPVA-ELER-HRACVNAIAWAPQSRRHICSVG 278 (337)
Q Consensus 236 -------~~~i~i~d~~~~~------~~~~-~~~~-~~~~v~~~~~~~~~~~~l~~~~ 278 (337)
...|.-++..... +.+. .+.. .......|+|.|+|. +.++.+
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~-Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK-IYYTIG 162 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSC-EEEEEC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe-EEEEEC
Confidence 1236666654311 1111 1211 123468899999998 655544
No 337
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.90 E-value=2.2 Score=39.02 Aligned_cols=198 Identities=9% Similarity=0.044 Sum_probs=100.3
Q ss_pred cceEEEeeeeccCcceEEEEEecCCCcceecCCCc---CCCCCCCCeEEEecC-CCCcccCcCCccEEEEeC-C------
Q 038533 31 GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSL---SFDHPYPPTKLMFDP-NSSSRKSSSNRHLLASSG-D------ 99 (337)
Q Consensus 31 ~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~---~~~~~~~i~~i~~~~-~~~~~~~~~~~~~l~~~~-~------ 99 (337)
+..++.|+.....-+.+.+|+.....-..... .+ .......-.++...+ ++. +++.|| +
T Consensus 398 ~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~-~~p~~~~p~~R~~hs~~~~~~~~~---------lyv~GG~~~~~~~~ 467 (695)
T 2zwa_A 398 NDVFYMGGSNPYRVNEILQLSIHYDKIDMKNI-EVSSSEVPVARMCHTFTTISRNNQ---------LLLIGGRKAPHQGL 467 (695)
T ss_dssp SCEEEECCBSSSBCCCEEEEEECSSCEEEEEC-CCCCSCCCCCCBSCEEEEETTTTE---------EEEECCBSSTTCBC
T ss_pred CEEEEECCCCCCCcCcEEEEECCCCeEEEecc-CCCCCCCCccccceEEEEEccCCE---------EEEEcCCCCCCCcc
Confidence 67777777522223456666655433222110 00 011122223444443 665 777765 1
Q ss_pred -eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCC--cEEEEeCCCccc--hhh---hhccCCc
Q 038533 100 -FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDT--TCTIWDIEKGVV--ETQ---LIAHDKE 171 (337)
Q Consensus 100 -~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg--~i~v~d~~~~~~--~~~---~~~~~~~ 171 (337)
.+.+||..+.....+..+.... ..-..+.+ . ++.+++.|+.++ .+.+||+.+.+- +.. +......
T Consensus 468 ~dv~~yd~~t~~W~~~~~~p~~R-----~~h~~~~~-~-~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~ 540 (695)
T 2zwa_A 468 SDNWIFDMKTREWSMIKSLSHTR-----FRHSACSL-P-DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLV 540 (695)
T ss_dssp CCCEEEETTTTEEEECCCCSBCC-----BSCEEEEC-T-TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCB
T ss_pred ccEEEEeCCCCcEEECCCCCCCc-----ccceEEEE-c-CCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccc
Confidence 5788998887554443333211 11222222 2 678888888655 699999887652 111 1111122
Q ss_pred eeEEEeC-C-CcEEEEEcC--C-----CeEEEEECCCCCC-----ceeeecC-CCCCCCceEEEeecCCCcEEEEEEecC
Q 038533 172 VYDICWG-E-ARVFASVSA--D-----GSVRIFDLRDKEH-----STIIYES-PQPDTPLLRLAWNKQDLRYMATILMDS 236 (337)
Q Consensus 172 v~~~~~~-~-~~~l~~~~~--d-----g~i~iwd~~~~~~-----~~~~~~~-~~~~~~i~~~~~~~~~~~~l~~~~~d~ 236 (337)
..++.+. . +.+++.|+. + ..+..||+.+... -..+... .........+.+. ++.+++.|+.++
T Consensus 541 ~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~--~~~iyv~GG~~~ 618 (695)
T 2zwa_A 541 SAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYIT--PRKLLIVGGTSP 618 (695)
T ss_dssp SCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEE--TTEEEEECCBCS
T ss_pred eeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeC--CCEEEEECCccC
Confidence 2334445 3 667777765 2 4588999988772 1111111 0111222333332 377777777431
Q ss_pred -------CEEEEEECCCC
Q 038533 237 -------NKVVILDIRSP 247 (337)
Q Consensus 237 -------~~i~i~d~~~~ 247 (337)
..+.+||+.+.
T Consensus 619 ~~~~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 619 SGLFDRTNSIISLDPLSE 636 (695)
T ss_dssp SCCCCTTTSEEEEETTTT
T ss_pred CCCCCCCCeEEEEECCCC
Confidence 23899999863
No 338
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.42 E-value=3.1 Score=38.47 Aligned_cols=271 Identities=7% Similarity=0.022 Sum_probs=136.7
Q ss_pred CceeEEEEe-cceEEEeeeeccCcceEEEEEecCCCcceecCCCc-CC-CCCCCCeEEEecCCCCcccCcCCccEEEEeC
Q 038533 22 YPLYAMAVC-GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSL-SF-DHPYPPTKLMFDPNSSSRKSSSNRHLLASSG 98 (337)
Q Consensus 22 ~~v~~~~~s-~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~-~~-~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~ 98 (337)
..|.++... ...|-+|+ .+.|..++. ....+...... .. .....|.++...+++. .|-.|.
T Consensus 146 ~~i~~i~~d~~g~lWigt-----~~Gl~~~~~--~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~---------~lWigt 209 (758)
T 3ott_A 146 NTIYSIIRTKDNQIYVGT-----YNGLCRYIP--SNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQ---------CVWIGT 209 (758)
T ss_dssp SCEEEEEECTTCCEEEEE-----TTEEEEEET--TTTEEEEECCCCCTTCSSCCEEEEEEETTTT---------EEEEEE
T ss_pred CeEEEEEEcCCCCEEEEe-----CCCHhhCcc--CCCceEEecCCCccccccceeEEEEEECCCC---------EEEEEE
Confidence 457777776 55666676 334555443 33333210000 00 0123477787776654 433333
Q ss_pred C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhh-------hccCC
Q 038533 99 D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQL-------IAHDK 170 (337)
Q Consensus 99 ~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~-------~~~~~ 170 (337)
+ .+..++..+++......+.. ..|.++...+ ++.+.+ |+.+ -+.+++..+++..... .-...
T Consensus 210 ~~Gl~~~~~~~~~~~~~~~l~~-------~~i~~i~~d~-~g~lWi-gT~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~ 279 (758)
T 3ott_A 210 EGYLFQYFPSTGQIKQTEAFHN-------NSIKSLALDG-NGDLLA-GTDN-GLYVYHNDTTPLQHIIHDSRNIQSLTNN 279 (758)
T ss_dssp EEEEEEEETTTTEEEEEEEEEE-------EEEEEEEECT-TCCEEE-EETT-EEEEECCTTSCCEEECCCTTCTTSCSCS
T ss_pred CCCCeEEcCCCCeEEeccCCCC-------CeEEEEEEcC-CCCEEE-EeCC-ceeEEecCCCcEEEEEcCCCCcCcCCcC
Confidence 4 77888887764332222322 4688887765 555544 4444 5888887665421110 01234
Q ss_pred ceeEEEeCCCcEEEEEcCCCeEEEEECCCCCCceeee----cCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCC
Q 038533 171 EVYDICWGEARVFASVSADGSVRIFDLRDKEHSTIIY----ESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRS 246 (337)
Q Consensus 171 ~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~ 246 (337)
.|.++.......|-.|+..| +.++... .. ..... ........|.++.-.. ++.+. .|+. ++ +..++..+
T Consensus 280 ~i~~i~~D~~g~lWiGT~~G-l~~~~~~-~~-~~~~~~~~~~~~~~~~~v~~i~~D~-~g~lW-iGt~-~G-l~~~~~~~ 352 (758)
T 3ott_A 280 IIWNIFADQEHNIWLGTDYG-ISLSRYN-SA-LQFIPISQITGTGDGNQFYSLFRDS-KGFYW-FGGA-NG-LIRFTDPA 352 (758)
T ss_dssp CEEEEEECTTCCEEEEESSS-EEEECCC-C--CEEEEHHHHSCSCCCCBEEEEEECT-TCCEE-EEET-TE-EEEESCTT
T ss_pred eEEEEEEcCCCCEEEEeCCc-ccccccC-Cc-eeEEecccCCCCCCCceEEEEEEcC-CCCEE-EeeC-Cc-ceeecccc
Confidence 58888877333455566666 5444332 21 11111 0111224577777665 45444 4454 45 77787654
Q ss_pred CC-CCeEEeec-------ccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeee-----CCCceeE
Q 038533 247 PT-LPVAELER-------HRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYS-----AGSEINQ 313 (337)
Q Consensus 247 ~~-~~~~~~~~-------~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~-----~~~~v~~ 313 (337)
.. .....+.. ....|.++.-.+++. |..|+ ++-|..|+....+.. ...... ....|.+
T Consensus 353 ~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~--lWigt-~~GL~~~~~~~~~~~------~~~~~~~~~~~~~~~v~~ 423 (758)
T 3ott_A 353 GERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQ--LWIAT-DGSINRYDYATRQFI------HYNIVDNTGTYNTNWTYY 423 (758)
T ss_dssp SSCCCCEEECTTCSSSCCSCSCEEEEEECTTSC--EEEEE-TTEEEEEETTTTEEE------EEEEECCC--CBSSSEEE
T ss_pred cccceeEEeccCCcCCCCCCCceEEEEECCCCC--EEEEe-CCcHhhcCcCCCcEE------EeecCCCcCCCCCceEEE
Confidence 21 11212210 123588888888876 44455 456888888722110 011101 1245788
Q ss_pred EEEccCCCceEEEEcCCcEEEE
Q 038533 314 LQWSPAQPDWLAIAFSNKMQLL 335 (337)
Q Consensus 314 ~~~~~~~~~l~~~~~d~~i~iw 335 (337)
+.-.+++. |..++.++.|.++
T Consensus 424 i~~d~~g~-lWigT~~~Gl~~~ 444 (758)
T 3ott_A 424 IFEDTAGQ-LWISTCLGGIFVV 444 (758)
T ss_dssp EEECTTSE-EEEEESSSCEEEE
T ss_pred EEEcCCCC-EEEEECCCceEEE
Confidence 88888875 4445544444444
No 339
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=94.18 E-value=2 Score=35.41 Aligned_cols=238 Identities=13% Similarity=0.095 Sum_probs=120.4
Q ss_pred CCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecC---CCCeEEEe-
Q 038533 72 PPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEI---EPKRIGTC- 145 (337)
Q Consensus 72 ~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~l~~~- 145 (337)
....|+|.|++. ++++-. . .|++++..++....+..+..-.. .-......|+++|. ++.+.++-
T Consensus 33 ~P~~ia~~pdG~---------llVter~~G~I~~v~~~~g~~~~v~~~~~v~~-~g~~GllGia~~Pdf~~~g~lYv~yt 102 (347)
T 3das_A 33 SPWGLAPLPGGD---------LLVSSRDEATITRVDAKTGRKTELGEVPGVSP-SGEGGLLGIALSPDYASDHMVYAYFT 102 (347)
T ss_dssp SEEEEEECTTSC---------EEEEETTTCEEEEECTTTCCEEEEEECTTCCC-BTTBSEEEEEECTTHHHHCEEEEEEE
T ss_pred CceEEEEcCCCc---------EEEEEecCCEEEEEECCCCcEeeecccCceee-cCCCCceeeEeccccccCCEEEEEEe
Confidence 467999999998 888876 4 88888866554333322211000 00156789999982 24444432
Q ss_pred -eCCCcEEEEeCCCcc----------ch-hhhh-ccCCceeEEEeC-CCcEEEEEcC-------------CCeEEEEECC
Q 038533 146 -SIDTTCTIWDIEKGV----------VE-TQLI-AHDKEVYDICWG-EARVFASVSA-------------DGSVRIFDLR 198 (337)
Q Consensus 146 -~~dg~i~v~d~~~~~----------~~-~~~~-~~~~~v~~~~~~-~~~~l~~~~~-------------dg~i~iwd~~ 198 (337)
..++.|.-|.+..+. .+ ..+. ........|+|. ++.++++.+. .|.|.-.+..
T Consensus 103 ~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d 182 (347)
T 3das_A 103 SASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPD 182 (347)
T ss_dssp CSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTT
T ss_pred cCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCC
Confidence 234556666554421 01 1111 111124568888 6766666442 2444444443
Q ss_pred CCCC------ceeeecCCCCCCCceEEEeecCCCcEEEEEEe-cCC-EEEEEECC--------C-------CCCCeEEee
Q 038533 199 DKEH------STIIYESPQPDTPLLRLAWNKQDLRYMATILM-DSN-KVVILDIR--------S-------PTLPVAELE 255 (337)
Q Consensus 199 ~~~~------~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-d~~-~i~i~d~~--------~-------~~~~~~~~~ 255 (337)
..-. ...++.. ++ .....++|+| ++.+.++=.. ++. .|.+...- . ...|+..+.
T Consensus 183 G~ip~~nPf~~~~i~a~-G~-RNp~Gla~dp-~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~ 259 (347)
T 3das_A 183 GEPAPGNPFPGSPVYSY-GH-RNVQGLAWDD-KQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWS 259 (347)
T ss_dssp SSBCTTCSSTTCCEEEB-CC-SBCCEEEECT-TCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEEC
T ss_pred CCccCCCCCCCCeEEee-CC-CCcceEEECC-CCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecC
Confidence 2200 0111211 12 3456789999 7766555322 211 13332110 0 012333333
Q ss_pred cccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEE
Q 038533 256 RHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIA 327 (337)
Q Consensus 256 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 327 (337)
.+......++|.. +. ++...-..+.|....+..... .......+.+...++.+++..|||..+++..
T Consensus 260 ~~~~ap~G~~~~~-g~-~~~~~l~~~~l~~v~~~~~~~---~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 260 TDEASPSGIAYAE-GS-VWMAGLRGERLWRIPLKGTAA---AADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp TTTCCEEEEEEET-TE-EEEEESTTCSEEEEEEETTEE---SSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred CCCCCCcceEEEc-Cc-eeeccccCCEEEEEEecCCce---ecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 2323556777763 44 555555566666666652110 0111112223456899999999997666655
No 340
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=93.95 E-value=2.3 Score=35.20 Aligned_cols=144 Identities=9% Similarity=0.016 Sum_probs=76.1
Q ss_pred CCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccc---hhhh----hccCCceeEEEeCC----CcEEEEEcC-------
Q 038533 127 APLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVV---ETQL----IAHDKEVYDICWGE----ARVFASVSA------- 188 (337)
Q Consensus 127 ~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~---~~~~----~~~~~~v~~~~~~~----~~~l~~~~~------- 188 (337)
.....|+|.| +++.++++...|.|++++.. ++. +..+ .........++++| +..|+....
T Consensus 18 ~~P~~i~~~p-dG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 18 DHPWALAFLP-DNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp SSEEEEEECS-TTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CCcEEEEEcC-CCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 3467899999 88834455668999999853 322 1111 11234568899984 455554432
Q ss_pred -CCeEEEEECCCCC----Cceeee-cCCC---CCCCceEEEeecCCCcEEEEEEec-------------CCEEEEEECCC
Q 038533 189 -DGSVRIFDLRDKE----HSTIIY-ESPQ---PDTPLLRLAWNKQDLRYMATILMD-------------SNKVVILDIRS 246 (337)
Q Consensus 189 -dg~i~iwd~~~~~----~~~~~~-~~~~---~~~~i~~~~~~~~~~~~l~~~~~d-------------~~~i~i~d~~~ 246 (337)
...|..|++.... ....+. ..+. .......+.|.| ++.+.++.+.. +. |.-+|...
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~Gd~~~~~~~q~~~~~~g~-I~ri~~dG 173 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGYLFIALGENNQRPTAQDLDKLQGK-LVRLTDQG 173 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECS-SSEEEEEECCTTCGGGGGCTTSCTTE-EEEEETTS
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECC-CCcEEEEECCCCCCCccCCCCCCCeE-EEEECCCC
Confidence 2356666665431 111121 1110 111245799999 88655554332 23 66666543
Q ss_pred CC---C--------CeEEe-ecccceeeEEEeCC-CCCCeEEE
Q 038533 247 PT---L--------PVAEL-ERHRACVNAIAWAP-QSRRHICS 276 (337)
Q Consensus 247 ~~---~--------~~~~~-~~~~~~v~~~~~~~-~~~~~l~~ 276 (337)
.- . ....+ .++ .....++|+| ++. ++++
T Consensus 174 ~~p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~-l~~~ 214 (353)
T 2g8s_A 174 EIPDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNA-LWLN 214 (353)
T ss_dssp CCCTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTE-EEEE
T ss_pred CCCCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCC-EEEE
Confidence 10 0 11122 233 3468899999 565 4443
No 341
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=93.86 E-value=2.1 Score=34.52 Aligned_cols=161 Identities=7% Similarity=0.033 Sum_probs=81.6
Q ss_pred CCCeEEEee--CCCcEEEEeCCCccchhhhhccCCceeEEEeC-CCcEEEEEcCC--------------CeEEEEECCCC
Q 038533 138 EPKRIGTCS--IDTTCTIWDIEKGVVETQLIAHDKEVYDICWG-EARVFASVSAD--------------GSVRIFDLRDK 200 (337)
Q Consensus 138 ~~~~l~~~~--~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d--------------g~i~iwd~~~~ 200 (337)
++..|.-.. .++.|...+.... ....+.. ..+. -++ .+++++.+... ..|+..++...
T Consensus 24 ~g~~iy~~n~~d~~~ly~~~~dg~-~~~~l~~--~~~~--~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~ 98 (302)
T 3s25_A 24 SDGEVFFSNTNDNGRLYAMNIDGS-NIHKLSN--DTAM--YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGH 98 (302)
T ss_dssp ETTEEEEEEGGGTTEEEEEETTSC-SCEEEEE--EEEE--EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSC
T ss_pred eCCEEEEEeCCCCceEEEEcCCCC-CCEEccC--Ccee--eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCC
Confidence 444444443 2456666665333 2333332 1222 234 56666665432 46778888777
Q ss_pred CCceeeecCCCCCCCceEEEeecCCCcEEEEEE--ecCC-EEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEE
Q 038533 201 EHSTIIYESPQPDTPLLRLAWNKQDLRYMATIL--MDSN-KVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSV 277 (337)
Q Consensus 201 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~--~d~~-~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 277 (337)
+... +.. .. ...|++ +++.|+-.. .++. .|+..++.. .....+..+.. .+++|+++.+..+.
T Consensus 99 ~~~~-l~~-----~~--~~~~s~-~g~~Iy~~~~~~~~~~~Iy~~~~dG--s~~~~lt~~~~----~~~~~~g~~iy~t~ 163 (302)
T 3s25_A 99 GSTV-LDP-----DP--CIYASL-IGNYIYYLHYDTQTATSLYRIRIDG--EEKKKIKNHYL----FTCNTSDRYFYYNN 163 (302)
T ss_dssp CCEE-EEC-----SC--EEEEEE-ETTEEEEEEESSSSCEEEEEEETTS--CCCEEEESSCC----CCSEEETTEEEEEC
T ss_pred cceE-eec-----CC--ccEEEE-eCCEEEEEeecCCCCceEEEEECCC--CCeEEEeCCCc----eEeeEECCEEEEEe
Confidence 6332 221 12 236777 777777766 2333 355556553 33455554432 45677888344454
Q ss_pred cCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEEEcC
Q 038533 278 GDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFS 329 (337)
Q Consensus 278 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 329 (337)
.....|..-++. . .....+.. .... ..++|++..|+-+..+
T Consensus 164 ~g~~~Iy~~~l~--g------~~~~~l~~--~~~~-~~~~P~g~~iy~t~~~ 204 (302)
T 3s25_A 164 PKNGQLYRYDTA--S------QSEALFYD--CNCY-KPVVLDDTNVYYMDVN 204 (302)
T ss_dssp TTTCCEEEEETT--T------TEEEEEEC--SCEE-EEEEEETTEEEEEEGG
T ss_pred CCCceEEEEECC--C------CCEEEEeC--CCcc-ceeeecCCEEEEEEcC
Confidence 445677777766 2 11222222 2222 2456888777766543
No 342
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.70 E-value=3.1 Score=35.85 Aligned_cols=107 Identities=13% Similarity=0.204 Sum_probs=58.5
Q ss_pred CCeEEEecCCCCcccCcCCccEEEEeCC--eEEEEecCCCCccceeeecCCC-CCcccCCeeEEEeecCC---CCeEEEe
Q 038533 72 PPTKLMFDPNSSSRKSSSNRHLLASSGD--FLRLWDVGDSSIEPVAVLNNSK-SSEFCAPLTSFDWNEIE---PKRIGTC 145 (337)
Q Consensus 72 ~i~~i~~~~~~~~~~~~~~~~~l~~~~~--~v~vw~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~---~~~l~~~ 145 (337)
....|+|.|+++ ++++-.. .|.+++..++....+..+..-- ...-......|+|+| + +..|..+
T Consensus 28 ~P~~~a~~pdG~---------l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~P-df~~~g~lYv~ 97 (454)
T 1cru_A 28 KPHALLWGPDNQ---------IWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHP-DFKNNPYIYIS 97 (454)
T ss_dssp SEEEEEECTTSC---------EEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECT-TTTTSCEEEEE
T ss_pred CceEEEEcCCCc---------EEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECC-CcCcCCEEEEE
Confidence 457999999998 8888764 6888876555433333332110 000115678999998 4 4444443
Q ss_pred eC-------------CCcEEEEeCCCc-------cchh-hhh-ccCCceeEEEeC-CCcEEEEEcC
Q 038533 146 SI-------------DTTCTIWDIEKG-------VVET-QLI-AHDKEVYDICWG-EARVFASVSA 188 (337)
Q Consensus 146 ~~-------------dg~i~v~d~~~~-------~~~~-~~~-~~~~~v~~~~~~-~~~~l~~~~~ 188 (337)
.. ...|.-++...+ +.+. .+. ........|+|. ++.++++.+.
T Consensus 98 ~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 98 GTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp EEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred EeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 32 134555554322 1111 111 111236789999 7777666543
No 343
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=92.95 E-value=2.5 Score=34.68 Aligned_cols=109 Identities=13% Similarity=0.036 Sum_probs=61.8
Q ss_pred EEEEeCC-eEEEEecCCCCccceeeecCCCCCcccCCeeEEEee--cCCCCeEEEe-eCCCcEEEEeCCCccchhhhhc-
Q 038533 93 LLASSGD-FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWN--EIEPKRIGTC-SIDTTCTIWDIEKGVVETQLIA- 167 (337)
Q Consensus 93 ~l~~~~~-~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~l~~~-~~dg~i~v~d~~~~~~~~~~~~- 167 (337)
+++...| .|.-+|..++ +.+..++... . .++....-. +.++..++.. +.||.|..++.++|.....+..
T Consensus 13 V~v~t~dG~l~Ald~~tG--~~~W~~~~~~---~-~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~ 86 (339)
T 2be1_A 13 LIAADVEGGLHAVDRRNG--HIIWSIEPEN---F-QPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIR 86 (339)
T ss_dssp EEEEETTSCEEEEETTTT--EEEEEECGGG---S-CCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHH
T ss_pred EEEEeCCCeEEEEECCCC--cEEEEecCCc---c-CCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccc
Confidence 5555556 9999998888 5565555420 0 122221100 1122334443 5899999999887753322210
Q ss_pred ---cCCceeE---EEe------CCCcEEEEEcCCCeEEEEECCCCCCceeee
Q 038533 168 ---HDKEVYD---ICW------GEARVFASVSADGSVRIFDLRDKEHSTIIY 207 (337)
Q Consensus 168 ---~~~~v~~---~~~------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 207 (337)
...++.. ... +.+..+++|+.+|.+...|+++++......
T Consensus 87 ~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 87 QLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp HHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred cceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 1122221 001 135688999999999999999998655543
No 344
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=89.28 E-value=8.7 Score=32.08 Aligned_cols=171 Identities=9% Similarity=0.076 Sum_probs=92.1
Q ss_pred cEEEEeCCCc--cchhhhhc------cCCceeEEEeC-C-------CcEEE-EEcCCCeEEEEECCCCCCceeeecC--C
Q 038533 150 TCTIWDIEKG--VVETQLIA------HDKEVYDICWG-E-------ARVFA-SVSADGSVRIFDLRDKEHSTIIYES--P 210 (337)
Q Consensus 150 ~i~v~d~~~~--~~~~~~~~------~~~~v~~~~~~-~-------~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~--~ 210 (337)
.|.+||+.++ +.++++.- ....+..+++. . +.+++ +=+..+.|.++|+.+++.-+..... +
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 5777888887 65554431 23456777776 1 23333 3345678999999988644433110 0
Q ss_pred CC-------------CCCceEEEeecCC----CcEEEEEEecCCEEEEEE---CCCC--CCCeEEeeccc---ceeeEEE
Q 038533 211 QP-------------DTPLLRLAWNKQD----LRYMATILMDSNKVVILD---IRSP--TLPVAELERHR---ACVNAIA 265 (337)
Q Consensus 211 ~~-------------~~~i~~~~~~~~~----~~~l~~~~~d~~~i~i~d---~~~~--~~~~~~~~~~~---~~v~~~~ 265 (337)
.. ...+..++++| + ++.|......+..++--. ++.. ...++.+ +.. ..-..++
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp-~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~-G~kg~~s~~~~~~ 281 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGD-RDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELL-GNRGKYNDAIALA 281 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECC-CCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEE-EECCTTCCEEEEE
T ss_pred ccCcceEECCEEeEeccCceEEEecC-CcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEe-eecCCCCCcceEE
Confidence 00 24678888888 5 677777666653233332 2221 1222222 222 2233456
Q ss_pred eC-CCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeee--CCCceeEEEEccCCCceEEE
Q 038533 266 WA-PQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYS--AGSEINQLQWSPAQPDWLAI 326 (337)
Q Consensus 266 ~~-~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~ 326 (337)
.. .+|. ++++--..+.|..|+.... ...+ .....+.. .-..+.++.+.++|...+.+
T Consensus 282 ~D~~~G~-ly~~~~~~~aI~~w~~~~~-~~~~--~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 282 YDPKTKV-IFFAEANTKQVSCWNTQKM-PLRM--KNTDVVYTSSRFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp ECTTTCE-EEEEESSSSEEEEEETTSC-SBCG--GGEEEEEECTTCCSEEEEEECTTSCEEEEE
T ss_pred EeCCCCe-EEEEeccCCeEEEEeCCCC-cccc--CceEEEEECCCccccCeEEECCCCeEEEEE
Confidence 75 5666 7777778889999998720 1110 00111111 12246788887777544444
No 345
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=88.17 E-value=10 Score=31.61 Aligned_cols=154 Identities=11% Similarity=0.031 Sum_probs=73.8
Q ss_pred CCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhh----c-c--------CCceeEEEeCC--CcEEEEEcCCCe
Q 038533 127 APLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLI----A-H--------DKEVYDICWGE--ARVFASVSADGS 191 (337)
Q Consensus 127 ~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~----~-~--------~~~v~~~~~~~--~~~l~~~~~dg~ 191 (337)
..+.+|.++|.+.+.+..+..++.|...+ ..++....+. . + ...+.++++++ ...++.+...+
T Consensus 177 ~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g- 254 (394)
T 3b7f_A 177 PKMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG- 254 (394)
T ss_dssp CEEEEEEECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-
T ss_pred CceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-
Confidence 45788999874455555555445444432 2222211111 0 0 12478888883 36677666554
Q ss_pred EEEEECCCCCCceeeec-CCC-CCCCceEEEeecCCCcEEEEEEe-----------cCCEEEEEECCCCCCCeEEeec-c
Q 038533 192 VRIFDLRDKEHSTIIYE-SPQ-PDTPLLRLAWNKQDLRYMATILM-----------DSNKVVILDIRSPTLPVAELER-H 257 (337)
Q Consensus 192 i~iwd~~~~~~~~~~~~-~~~-~~~~i~~~~~~~~~~~~l~~~~~-----------d~~~i~i~d~~~~~~~~~~~~~-~ 257 (337)
|...+-.... -..+.. .+. ....+.++.++|.+...+.++.. ++. ..+|.....++....+.. -
T Consensus 255 l~~s~D~G~t-W~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~-~~~~~S~DgG~tW~~~~~gl 332 (394)
T 3b7f_A 255 IYRMDRREGV-WKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGK-PAVYVTRDAGESWQRQDRGL 332 (394)
T ss_dssp EEEEETTTTE-EECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSS-CCEEEESSTTSCCEEECBTS
T ss_pred EEEeCCCCCc-ceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCc-eeEEEECCCCCCceECCCCC
Confidence 4443322211 111111 111 00235678888755555665542 223 456655553433333321 0
Q ss_pred c--c-----eeeEEEeCCCCCCeEEEEcCCCcEE
Q 038533 258 R--A-----CVNAIAWAPQSRRHICSVGDDSQAF 284 (337)
Q Consensus 258 ~--~-----~v~~~~~~~~~~~~l~~~~~dg~i~ 284 (337)
. . ....++++|.....|+.++.++.|.
T Consensus 333 p~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~ 366 (394)
T 3b7f_A 333 PTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIW 366 (394)
T ss_dssp CCSSCCCCCCTBSEEECCSSSCCEEEECTTSCEE
T ss_pred CCccccceEEEEEEEECCCCCCEEEEEeCCCeEE
Confidence 0 0 1135888886533566776666543
No 346
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=87.84 E-value=17 Score=33.77 Aligned_cols=150 Identities=11% Similarity=-0.012 Sum_probs=76.7
Q ss_pred CCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhc-------cCCceeEEEeCC--CcEEEEEcCCCe----EE
Q 038533 127 APLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIA-------HDKEVYDICWGE--ARVFASVSADGS----VR 193 (337)
Q Consensus 127 ~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~-------~~~~v~~~~~~~--~~~l~~~~~dg~----i~ 193 (337)
..|.+|+++|.+...+.++...+.|...+ ..++.-..+.. ....+.++++++ .+.++.+..+.. -.
T Consensus 15 g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~ 93 (789)
T 1sqj_A 15 GYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAA 93 (789)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCE
T ss_pred CcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccE
Confidence 67999999996678888888777776554 23332111111 124688999873 344444432211 23
Q ss_pred EEECCC-CCCceeeecC-C-----CCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeec------ccce
Q 038533 194 IFDLRD-KEHSTIIYES-P-----QPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELER------HRAC 260 (337)
Q Consensus 194 iwd~~~-~~~~~~~~~~-~-----~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~------~~~~ 260 (337)
||-... ++.=...... . .....+..++++|.+...++++...+. ||-....++.-..+.. ....
T Consensus 94 v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g---l~~S~DgG~TW~~~~~~~~~~~~~~~ 170 (789)
T 1sqj_A 94 FYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG---IWKSSDRAKTWTNVTSIPDAFTNGIG 170 (789)
T ss_dssp EEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC---EEEESSTTSSCEEETTSCCCCSTTTC
T ss_pred EEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC---EEEECCCCcccCCCccCccccCCCCC
Confidence 333332 2211111110 0 001135678888866667777664544 3333333333332221 1245
Q ss_pred eeEEEeCCCCCCeEEEEcCC
Q 038533 261 VNAIAWAPQSRRHICSVGDD 280 (337)
Q Consensus 261 v~~~~~~~~~~~~l~~~~~d 280 (337)
+..+.++|.....++.+..+
T Consensus 171 ~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 171 YTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp EEEEEECTTSTTCEEEEESS
T ss_pred eEEEEECCCCCCEEEEEEcC
Confidence 78889988643355555544
No 347
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=87.52 E-value=2 Score=35.36 Aligned_cols=114 Identities=11% Similarity=0.040 Sum_probs=65.6
Q ss_pred CCeEEEeeCCCcEEEEeCCCccchhhhhcc-CCceeEEEeC---CCcEEEEE--cCCCeEEEEECCCCCCceeeecCC-C
Q 038533 139 PKRIGTCSIDTTCTIWDIEKGVVETQLIAH-DKEVYDICWG---EARVFASV--SADGSVRIFDLRDKEHSTIIYESP-Q 211 (337)
Q Consensus 139 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~-~~~v~~~~~~---~~~~l~~~--~~dg~i~iwd~~~~~~~~~~~~~~-~ 211 (337)
+..++.++.||.|+-+|.++|+.+-+++.. ..++....-. .+..++.+ +.||.|..+|..++.......... -
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 457889999999999999999877766543 1222222111 12234433 689999999987764222111100 0
Q ss_pred CCCCceEEEeec--------CCCcEEEEEEecCCEEEEEECCCCCCCeEEee
Q 038533 212 PDTPLLRLAWNK--------QDLRYMATILMDSNKVVILDIRSPTLPVAELE 255 (337)
Q Consensus 212 ~~~~i~~~~~~~--------~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~ 255 (337)
...++.. .=.| ..+..+++++.++. +...|+++ ++.+..+.
T Consensus 90 ~~SP~~~-~~~pvv~~~~~~~~~g~Vy~Gs~~g~-l~ald~~t-G~~~W~~~ 138 (339)
T 2be1_A 90 STSPLHL-KTNIVVNDSGKIVEDEKVYTGSMRTI-MYTINMLN-GEIISAFG 138 (339)
T ss_dssp TTCSEEE-ECC----------CCEEEEECEEEEE-EEEEETTT-CCEEEEES
T ss_pred ecccccc-CCCceeecccccccCCEEEEEecCCE-EEEEECCC-CcEEEEEe
Confidence 0111111 0000 04567788888887 88889887 55555543
No 348
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=87.38 E-value=11 Score=31.02 Aligned_cols=145 Identities=14% Similarity=0.109 Sum_probs=80.5
Q ss_pred CCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccc--hhh----hhccCCceeEEEeCC----CcEEEEE---cCCCeEE
Q 038533 127 APLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVV--ETQ----LIAHDKEVYDICWGE----ARVFASV---SADGSVR 193 (337)
Q Consensus 127 ~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~--~~~----~~~~~~~v~~~~~~~----~~~l~~~---~~dg~i~ 193 (337)
.....|+|.| ++.++++-...|.|++++..+++. +.. +.........|+++| +..|+.. ..++.|.
T Consensus 32 ~~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 32 NSPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp SSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCceEEEEcC-CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 4567999999 888777765589999998765542 111 122345678999984 3444432 2345666
Q ss_pred EEECCCCC-------Cceeeec-CC-CCCCCceEEEeecCCCcEEEEEEe-------------cCCEEEEEECCCC---C
Q 038533 194 IFDLRDKE-------HSTIIYE-SP-QPDTPLLRLAWNKQDLRYMATILM-------------DSNKVVILDIRSP---T 248 (337)
Q Consensus 194 iwd~~~~~-------~~~~~~~-~~-~~~~~i~~~~~~~~~~~~l~~~~~-------------d~~~i~i~d~~~~---~ 248 (337)
-|.+.... ....+.. .+ ........+.|.| ++.+.++.+. .+. |.-.+.... .
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgp-DG~Lyvt~Gd~~~~~~~qd~~~~~G~-IlRi~~dG~ip~~ 188 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGP-DKMLYAGTGESGDTGLSQDRKSLGGK-ILRMTPDGEPAPG 188 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECT-TSCEEEECBCTTCGGGTTCTTCSTTC-EEEECTTSSBCTT
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCC-CCCEEEEECCCCCCccccCCCCCCCE-EEEEeCCCCccCC
Confidence 66665421 1122211 11 1112346799999 8877666542 234 444444321 0
Q ss_pred CC---eEEe-ecccceeeEEEeCCCCCCeEEE
Q 038533 249 LP---VAEL-ERHRACVNAIAWAPQSRRHICS 276 (337)
Q Consensus 249 ~~---~~~~-~~~~~~v~~~~~~~~~~~~l~~ 276 (337)
.+ ...+ .+|. ....++|+|++. +.++
T Consensus 189 nPf~~~~i~a~G~R-Np~Gla~dp~G~-L~~~ 218 (347)
T 3das_A 189 NPFPGSPVYSYGHR-NVQGLAWDDKQR-LFAS 218 (347)
T ss_dssp CSSTTCCEEEBCCS-BCCEEEECTTCC-EEEE
T ss_pred CCCCCCeEEeeCCC-CcceEEECCCCC-EEEE
Confidence 00 1122 2343 457899999877 5444
No 349
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=85.91 E-value=1.5 Score=38.57 Aligned_cols=95 Identities=6% Similarity=-0.024 Sum_probs=61.3
Q ss_pred EEEEECCC----CCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCC------CCCCce-eeeeC
Q 038533 239 VVILDIRS----PTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGP------NGIDPM-SMYSA 307 (337)
Q Consensus 239 i~i~d~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~------~~~~~~-~~~~~ 307 (337)
+.+.|.+. .......+. -......+..+|+|++++++|-.+.++.++|++ +.... ...... ....-
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP-~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~--k~~~~~~~k~~~~~~~~~ae~e~ 376 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVP-VPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAID--KLPDLFAGKLADPRDVIVGEPEL 376 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEE-ESSSCCCEEECTTSCEEEEECTTSSBEEEEEGG--GHHHHHTTCCSCGGGGEEECCBC
T ss_pred eeEEccccccccCCceEEEEe-CCCCCcceeeCCCCCEEEEcCCCCCeEEEEEee--hhhhhhhccccCcccceEeeccC
Confidence 77888876 223333333 334567899999999666777789999999998 42110 000111 11123
Q ss_pred CCceeEEEEccCCCceEEEE-cCCcEEEEeC
Q 038533 308 GSEINQLQWSPAQPDWLAIA-FSNKMQLLKV 337 (337)
Q Consensus 308 ~~~v~~~~~~~~~~~l~~~~-~d~~i~iw~l 337 (337)
.......+|.++| ...++- -|..|.-|++
T Consensus 377 GlGPlHt~Fd~~G-~aYTtlfidSqvvkWni 406 (638)
T 3sbq_A 377 GLGPLHTTFDGRG-NAYTTLFIDSQVVKWNM 406 (638)
T ss_dssp CSCEEEEEECSSS-EEEEEETTTTEEEEEEH
T ss_pred CCcccEEEECCCC-ceEeeeeecceEEEEec
Confidence 4567899999999 455544 6999999985
No 350
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=82.91 E-value=17 Score=29.22 Aligned_cols=136 Identities=13% Similarity=0.064 Sum_probs=71.5
Q ss_pred EeecCCCCeEEEee----CCCcEEEEeCCCccchhhhhccCCceeEEEeC-CCcEEEEEcC-CCeEEEEECCCCCCceee
Q 038533 133 DWNEIEPKRIGTCS----IDTTCTIWDIEKGVVETQLIAHDKEVYDICWG-EARVFASVSA-DGSVRIFDLRDKEHSTII 206 (337)
Q Consensus 133 ~~~~~~~~~l~~~~----~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~-dg~i~iwd~~~~~~~~~~ 206 (337)
.|++ +++.|+-.. .+..|...++... ....+..+.. .+++ .++.|+-.+. ...|...++...... .+
T Consensus 110 ~~s~-~g~~Iy~~~~~~~~~~~Iy~~~~dGs-~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~-~l 182 (302)
T 3s25_A 110 YASL-IGNYIYYLHYDTQTATSLYRIRIDGE-EKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEA-LF 182 (302)
T ss_dssp EEEE-ETTEEEEEEESSSSCEEEEEEETTSC-CCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEE-EE
T ss_pred EEEE-eCCEEEEEeecCCCCceEEEEECCCC-CeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEE-EE
Confidence 6676 677777655 3345555666433 3333333322 2344 4555554444 677888888766533 33
Q ss_pred ecCCCCCCCceEEEeecCCCcEEEEEEecC-CEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEc--CCCcE
Q 038533 207 YESPQPDTPLLRLAWNKQDLRYMATILMDS-NKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVG--DDSQA 283 (337)
Q Consensus 207 ~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~-~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~dg~i 283 (337)
.. +... ..+.| ++.+|+-....+ ..|..-++.. .....+.. ..+ ..|+|++. +|.-++ ..+.|
T Consensus 183 ~~-----~~~~-~~~~P-~g~~iy~t~~~~~~~I~~~~ldG--~~~~~Lt~--~~~--~~~~~~g~-~Iy~~~~~~~~~i 248 (302)
T 3s25_A 183 YD-----CNCY-KPVVL-DDTNVYYMDVNRDNAIVHVNINN--PNPVVLTE--ANI--EHYNVYGS-LIFYQRGGDNPAL 248 (302)
T ss_dssp EC-----SCEE-EEEEE-ETTEEEEEEGGGTTEEEEECSSS--CCCEECSC--SCE--EEEEEETT-EEEEEECSSSCEE
T ss_pred eC-----CCcc-ceeee-cCCEEEEEEcCCCcEEEEEECCC--CCeEEEeC--CCc--ceEEECCC-EEEEEECCCCcEE
Confidence 22 1222 34568 777777666543 2366666654 22344432 223 34778888 555442 23455
Q ss_pred EEEeCC
Q 038533 284 FIWELP 289 (337)
Q Consensus 284 ~iw~~~ 289 (337)
..-+++
T Consensus 249 ~~~~~D 254 (302)
T 3s25_A 249 CVVKND 254 (302)
T ss_dssp EEEETT
T ss_pred EEEECC
Confidence 555555
No 351
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=82.59 E-value=7.7 Score=34.26 Aligned_cols=73 Identities=15% Similarity=0.059 Sum_probs=52.4
Q ss_pred CCceEEEeecCCCcEEEEEEecCCEEEEEECCCCC-----CC-------eEEeecccceeeEEEeCCCCCCeEEEEcCCC
Q 038533 214 TPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPT-----LP-------VAELERHRACVNAIAWAPQSRRHICSVGDDS 281 (337)
Q Consensus 214 ~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~-----~~-------~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 281 (337)
.....+..+| +|+++++++.-..++.++|.++.. +. ....+ -.-.....+|.++|. ...+---|.
T Consensus 323 ksPHGv~vsP-DGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~-aYTtlfidS 399 (638)
T 3sbq_A 323 KNPHGCNTSS-DGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGN-AYTTLFIDS 399 (638)
T ss_dssp SSCCCEEECT-TSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSE-EEEEETTTT
T ss_pred CCCcceeeCC-CCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCc-eEeeeeecc
Confidence 3456788999 999998887665569999988411 11 11122 123457789999996 777788999
Q ss_pred cEEEEeCC
Q 038533 282 QAFIWELP 289 (337)
Q Consensus 282 ~i~iw~~~ 289 (337)
.|.-|++.
T Consensus 400 qvvkWni~ 407 (638)
T 3sbq_A 400 QVVKWNME 407 (638)
T ss_dssp EEEEEEHH
T ss_pred eEEEEecc
Confidence 99999997
No 352
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=80.46 E-value=20 Score=28.42 Aligned_cols=219 Identities=12% Similarity=0.065 Sum_probs=114.7
Q ss_pred CCCeEEEecCCCCcccCcCCccEEEEeCCeEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCc
Q 038533 71 YPPTKLMFDPNSSSRKSSSNRHLLASSGDFLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTT 150 (337)
Q Consensus 71 ~~i~~i~~~~~~~~~~~~~~~~~l~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~ 150 (337)
..|..|+--.... ++. ..+.|..|-.......-+... ....|..++... ...++. . ||.
T Consensus 24 ~~i~~ia~G~~h~---------~~l-~~G~v~~wG~n~~Gqlg~p~~-------~~~~i~~ia~G~--~hs~~l-~-~G~ 82 (282)
T 3qhy_B 24 SGVDAIAGGYFHG---------LAL-KGGKVLGWGANLNGQLTMPAA-------TQSGVDAIAAGN--YHSLAL-K-DGE 82 (282)
T ss_dssp SSCCEEEECSSEE---------EEE-ETTEEEEEECCSSSTTSCCGG-------GGSCCCEEEECS--SEEEEE-E-TTE
T ss_pred CCCcEEEeCCCeE---------EEE-ECCEEEEEeCCCCCCCCCCcc-------CCCCEEEEEeCC--CEEEEE-E-CCE
Confidence 3577777654433 333 323888887654310000000 114677777643 333444 5 899
Q ss_pred EEEEeCCCccchhhhhccCCceeEEEeCCCcEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEE
Q 038533 151 CTIWDIEKGVVETQLIAHDKEVYDICWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMA 230 (337)
Q Consensus 151 i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 230 (337)
|..|-....-.+-.-..-...|..++......++. . +|.|..|-............ ....|..++.. ....+
T Consensus 83 v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~hs~al-~-~G~v~~wG~n~~gqlg~~~~---~~~~i~~i~~G---~~~~~ 154 (282)
T 3qhy_B 83 VIAWGGNEDGQTTVPAEARSGVDAIAAGAWASYAL-K-DGKVIAWGDDSDGQTTVPAE---AQSGVTALDGG---VYTAL 154 (282)
T ss_dssp EEEEECCTTSTTCCCGGGSSSEEEEEEETTEEEEE-E-TTEEEEEECCTTSTTSCCGG---GGSSEEEEEEC---SSEEE
T ss_pred EEEeeCCCCCCCCCCcccCCCeEEEECcCCEEEEE-e-CCeEEEecCCCCCcCCCCcc---CCCCeEEEEcc---cCEEE
Confidence 99997654322211111234677777664433443 4 99999998765432211111 12456666653 23333
Q ss_pred EEEecCCEEEEEECCCCCCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCc
Q 038533 231 TILMDSNKVVILDIRSPTLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSE 310 (337)
Q Consensus 231 ~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 310 (337)
.-. ++. |+.|-....++.- ....-...|..++..... .++. .||.+..|-.. ...+. +. +. .....
T Consensus 155 ~l~-~G~-v~~wG~n~~gqlg-~p~~~~~~v~~i~~G~~h--s~al--~~G~v~~wG~n--~~gql-g~-p~---~~~~~ 220 (282)
T 3qhy_B 155 AVK-NGG-VIAWGDNYFGQTT-VPAEAQSGVDDVAGGIFH--SLAL--KDGKVIAWGDN--RYKQT-TV-PT---EALSG 220 (282)
T ss_dssp EEE-TTE-EEEEECCTTSTTS-CCGGGGSSEEEEEECSSE--EEEE--ETTEEEEEECC--TTSTT-CC-CG---GGGSS
T ss_pred EEE-CCE-EEEecCCCCCCCC-CceecCCCeEEEEecCCE--EEEE--ECCeEEEEECC--CCCCC-CC-Cc---ccCCC
Confidence 334 776 9999876544321 111123467777766553 3444 59999999876 33221 11 11 11234
Q ss_pred eeEEEEccCCCceEEEEcCCcEEEE
Q 038533 311 INQLQWSPAQPDWLAIAFSNKMQLL 335 (337)
Q Consensus 311 v~~~~~~~~~~~l~~~~~d~~i~iw 335 (337)
|..++-... ..++.. ||.|..|
T Consensus 221 v~~i~~G~~--h~~al~-~g~v~~w 242 (282)
T 3qhy_B 221 VSAIASGEW--YSLALK-NGKVIAW 242 (282)
T ss_dssp CCEEEECSS--CEEEEE-TTEEEEE
T ss_pred ceEEEcCCC--EEEEEE-CCEEEEe
Confidence 666665544 344444 8888877
No 353
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=77.63 E-value=26 Score=28.24 Aligned_cols=193 Identities=11% Similarity=0.104 Sum_probs=103.7
Q ss_pred CCCeEEEeeCCCcEEEEeCCCccch---------hhhhccCCceeEEEeC-CCcEEEEEcCCCeEEEEECC---CCC---
Q 038533 138 EPKRIGTCSIDTTCTIWDIEKGVVE---------TQLIAHDKEVYDICWG-EARVFASVSADGSVRIFDLR---DKE--- 201 (337)
Q Consensus 138 ~~~~l~~~~~dg~i~v~d~~~~~~~---------~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~---~~~--- 201 (337)
+...+++.+.+|.|+--.+..-+.. ..++. .+.+..+... ..+.++..+..|.++-+... ...
T Consensus 7 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke-~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 7 KENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLND-GDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp -CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCC-CCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 5677888999999998866433211 11222 2334444444 56678888888987766543 211
Q ss_pred ---CceeeecCCCCCCCceEEEeecC--CCcEEEEEEecCCEEEEEECCCCC------CCeEEeecccceeeEEEeCCCC
Q 038533 202 ---HSTIIYESPQPDTPLLRLAWNKQ--DLRYMATILMDSNKVVILDIRSPT------LPVAELERHRACVNAIAWAPQS 270 (337)
Q Consensus 202 ---~~~~~~~~~~~~~~i~~~~~~~~--~~~~l~~~~~d~~~i~i~d~~~~~------~~~~~~~~~~~~v~~~~~~~~~ 270 (337)
........ .....+..+...+. +..+++..+..|. ++...+.... ...-.+.. ...+..+......
T Consensus 86 ~G~~i~~~l~l-~~~e~i~~~~~~~~~~~~~~ll~~T~~G~-~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~ 162 (312)
T 1suu_A 86 KGQNISELINL-GDQEEILTIKNSKDLTDDAYLLLTTASGK-IARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKD 162 (312)
T ss_dssp --CBGGGTSCC-CTTCCEEEEEEESCCCTTCEEEEEETTSE-EEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTT
T ss_pred CCcChhhccCC-CCCCEEEEEEEeccCCCCCEEEEEeCCCe-EEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCC
Confidence 00011111 12345555533321 3567888888887 8877764321 11112232 3344444444434
Q ss_pred CCeEEEEcCCCcEEEEeCCC-CCCCC-CCCCCceeeeeCCCceeEEEEccCCCceEEEEcCCcEEEEe
Q 038533 271 RRHICSVGDDSQAFIWELPL-PPVAG-PNGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLLK 336 (337)
Q Consensus 271 ~~~l~~~~~dg~i~iw~~~~-~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~ 336 (337)
. .++..+.+|.+..+.... +...+ ..|.....+. ....|..+..-+++..+++.+..|..+...
T Consensus 163 ~-~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~-~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~ 228 (312)
T 1suu_A 163 E-KVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLK-EGDLFVKVLSVKENPYLLIVSENGYGKRLN 228 (312)
T ss_dssp C-EEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCC-TTCCEEEEEECTTCSEEEEEETTSEEEEEE
T ss_pred C-EEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeC-CCCEEEEEEEECCCCeEEEEECCCceEEEE
Confidence 4 688888899998888862 11111 1122222222 245566666655555688888888776554
No 354
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=76.32 E-value=32 Score=28.57 Aligned_cols=140 Identities=8% Similarity=-0.045 Sum_probs=68.2
Q ss_pred CCeEEEeeCCCcEEEEeCCC-ccchhhh--hccCCceeEEEeCC--CcEEEEEcCCC----eEEEEECCCCCCceeeec-
Q 038533 139 PKRIGTCSIDTTCTIWDIEK-GVVETQL--IAHDKEVYDICWGE--ARVFASVSADG----SVRIFDLRDKEHSTIIYE- 208 (337)
Q Consensus 139 ~~~l~~~~~dg~i~v~d~~~-~~~~~~~--~~~~~~v~~~~~~~--~~~l~~~~~dg----~i~iwd~~~~~~~~~~~~- 208 (337)
...|.+|...| +.+++... ++....+ ......|.+|++++ ...+..+...| .|...+ ..++.-..+..
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~ 99 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRP 99 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBC
T ss_pred CCEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCcc
Confidence 45677777777 55554332 2211111 11235689999984 55566665555 444332 22221111111
Q ss_pred --CCC--------CCCCceEEEeecCC-CcEEEEEEecCCEEEEEECCCCCCCeEEeec-------------------cc
Q 038533 209 --SPQ--------PDTPLLRLAWNKQD-LRYMATILMDSNKVVILDIRSPTLPVAELER-------------------HR 258 (337)
Q Consensus 209 --~~~--------~~~~i~~~~~~~~~-~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~-------------------~~ 258 (337)
... ....|.++++.|.+ ...+.+++..+. |...+ ..+.....+.. ..
T Consensus 100 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~gg-l~~S~--DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~ 176 (394)
T 3b7f_A 100 PAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQG-LFRST--DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDG 176 (394)
T ss_dssp CCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTE-EEEES--STTSBCEECHHHHTCTTHHHHHCCC----CCC
T ss_pred ccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCc-EEEEc--CCCCCeEECcCccCCccccccccccccCCCCC
Confidence 000 11246788888744 667777777666 55443 22222222211 12
Q ss_pred ceeeEEEeCCCCCCeEEEEcCCCcE
Q 038533 259 ACVNAIAWAPQSRRHICSVGDDSQA 283 (337)
Q Consensus 259 ~~v~~~~~~~~~~~~l~~~~~dg~i 283 (337)
..+.+|.+.|..+..|..+..++.|
T Consensus 177 ~~i~~i~~d~~~~~~l~vg~~~ggl 201 (394)
T 3b7f_A 177 PKMHSILVDPRDPKHLYIGMSSGGV 201 (394)
T ss_dssp CEEEEEEECTTCTTCEEEEEETBEE
T ss_pred CceeEEEECCCCCCEEEEEECCCCE
Confidence 3578899998532245555444433
No 355
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=74.92 E-value=29 Score=27.42 Aligned_cols=239 Identities=13% Similarity=0.031 Sum_probs=124.5
Q ss_pred ceeEEEEe-cceEEEeeeeccCcceEEEEEecCCCcceecCCCcCCCCCCCCeEEEecCCCCcccCcCCccEEEEeCCeE
Q 038533 23 PLYAMAVC-GQRIAVGSFIEDYTNRVDVVSFEPESLSIKTHPSLSFDHPYPPTKLMFDPNSSSRKSSSNRHLLASSGDFL 101 (337)
Q Consensus 23 ~v~~~~~s-~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~l~~~~~~v 101 (337)
.|..++.. ...++. . ||.|..|-.+.....-.. ......|..|+...... +++ -.+.|
T Consensus 25 ~i~~ia~G~~h~~~l-~-----~G~v~~wG~n~~Gqlg~p-----~~~~~~i~~ia~G~~hs---------~~l-~~G~v 83 (282)
T 3qhy_B 25 GVDAIAGGYFHGLAL-K-----GGKVLGWGANLNGQLTMP-----AATQSGVDAIAAGNYHS---------LAL-KDGEV 83 (282)
T ss_dssp SCCEEEECSSEEEEE-E-----TTEEEEEECCSSSTTSCC-----GGGGSCCCEEEECSSEE---------EEE-ETTEE
T ss_pred CCcEEEeCCCeEEEE-E-----CCEEEEEeCCCCCCCCCC-----ccCCCCEEEEEeCCCEE---------EEE-ECCEE
Confidence 46666665 444443 3 788888765543211111 11223577776654443 333 32288
Q ss_pred EEEecCCC-CccceeeecCCCCCcccCCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhccCCceeEEEeCCC
Q 038533 102 RLWDVGDS-SIEPVAVLNNSKSSEFCAPLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAHDKEVYDICWGEA 180 (337)
Q Consensus 102 ~vw~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~ 180 (337)
..|-.... ++..... ....|..++... ...+.-. ||.|..|-....-.+-........|..++....
T Consensus 84 ~~wG~n~~Gqlg~P~~--------~~~~v~~ia~G~---~hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~ 151 (282)
T 3qhy_B 84 IAWGGNEDGQTTVPAE--------ARSGVDAIAAGA---WASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVY 151 (282)
T ss_dssp EEEECCTTSTTCCCGG--------GSSSEEEEEEET---TEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSS
T ss_pred EEeeCCCCCCCCCCcc--------cCCCeEEEECcC---CEEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccC
Confidence 88876543 1110000 114677887754 3333444 899999976542222111122345777776643
Q ss_pred cEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeecccce
Q 038533 181 RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELERHRAC 260 (337)
Q Consensus 181 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~~~~~ 260 (337)
..++. . ||.+..|-............ ....|..++-. ....++. .++. |+.|-....+++- .-......
T Consensus 152 ~~~~l-~-~G~v~~wG~n~~gqlg~p~~---~~~~v~~i~~G--~~hs~al--~~G~-v~~wG~n~~gqlg-~p~~~~~~ 220 (282)
T 3qhy_B 152 TALAV-K-NGGVIAWGDNYFGQTTVPAE---AQSGVDDVAGG--IFHSLAL--KDGK-VIAWGDNRYKQTT-VPTEALSG 220 (282)
T ss_dssp EEEEE-E-TTEEEEEECCTTSTTSCCGG---GGSSEEEEEEC--SSEEEEE--ETTE-EEEEECCTTSTTC-CCGGGGSS
T ss_pred EEEEE-E-CCEEEEecCCCCCCCCCcee---cCCCeEEEEec--CCEEEEE--ECCe-EEEEECCCCCCCC-CCcccCCC
Confidence 34443 3 79999998765432221111 12456666653 2333333 5887 9999876544321 11112245
Q ss_pred eeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCC
Q 038533 261 VNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQ 320 (337)
Q Consensus 261 v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 320 (337)
|..++...... ++.. ||.+..|-.. ...+ .. ....|.+++-...-
T Consensus 221 v~~i~~G~~h~--~al~--~g~v~~wG~n--~~gq------~~---v~~~v~~iaaG~~h 265 (282)
T 3qhy_B 221 VSAIASGEWYS--LALK--NGKVIAWGSS--RTAP------SS---VQSGVSSIEAGPNA 265 (282)
T ss_dssp CCEEEECSSCE--EEEE--TTEEEEESTT--CCCC------GG---GSSCEEEEEECSSC
T ss_pred ceEEEcCCCEE--EEEE--CCEEEEecCC--CCcc------cc---CCCCcEEEEECcCe
Confidence 77777665543 3333 9999999877 3221 11 12357777766553
No 356
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=70.58 E-value=65 Score=29.55 Aligned_cols=196 Identities=11% Similarity=0.067 Sum_probs=95.0
Q ss_pred eEEE-eecCCCCeEEEe-eCC----CcEEEEeCCCccchhh-hh-ccCC------ceeEEEeCCCcEEEEEc--------
Q 038533 130 TSFD-WNEIEPKRIGTC-SID----TTCTIWDIEKGVVETQ-LI-AHDK------EVYDICWGEARVFASVS-------- 187 (337)
Q Consensus 130 ~~~~-~~~~~~~~l~~~-~~d----g~i~v~d~~~~~~~~~-~~-~~~~------~v~~~~~~~~~~l~~~~-------- 187 (337)
..+. ++| ++++++.+ +.. ..++++|+.+++.+.. +. .-.. ....++|.+.+.++.+.
T Consensus 132 ~g~~~~~~-~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~ 210 (711)
T 4hvt_A 132 RGVSNCFQ-NPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEIT 210 (711)
T ss_dssp EEEEECSS-STTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBC
T ss_pred eceeecCC-CCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcC
Confidence 3444 677 77766654 322 3699999999986642 22 0000 11344777444444432
Q ss_pred ---CCCeEEEEECCCCCC-ceeeecCCCCCCCceEEEeecCCCc-----EEEEEEec--CCEEEEEECCCCCCCeEEeec
Q 038533 188 ---ADGSVRIFDLRDKEH-STIIYESPQPDTPLLRLAWNKQDLR-----YMATILMD--SNKVVILDIRSPTLPVAELER 256 (337)
Q Consensus 188 ---~dg~i~iwd~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~-----~l~~~~~d--~~~i~i~d~~~~~~~~~~~~~ 256 (337)
....++.|.+.+... -..++..... ..-.....++ +++ .+++.+.+ ...+++.|...+...+..+..
T Consensus 211 ~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~-~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 288 (711)
T 4hvt_A 211 SSLYPNSLYIWKRGESIEKAKKLFEVPKE-YIYVSAGKLL-SDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINM 288 (711)
T ss_dssp TTSSBCEEEEEETTSCGGGCEEEEECCTT-SCEEEEEESS-CTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCS
T ss_pred cCCCCCEEEEEECCCChHHCeEEeccCCC-ceEEEEEEec-CCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeec
Confidence 235688888877643 3344444222 2223344455 444 24433322 234777776643333333322
Q ss_pred ccceeeEEEeCCCCCCeEEEEc----------CCCcEEEEeCCCCCCCCCCCCCceeee--eCCCceeEEEEccCCCceE
Q 038533 257 HRACVNAIAWAPQSRRHICSVG----------DDSQAFIWELPLPPVAGPNGIDPMSMY--SAGSEINQLQWSPAQPDWL 324 (337)
Q Consensus 257 ~~~~v~~~~~~~~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~ 324 (337)
... ..+..+..+. +++... ..+.|...++..+....+.......+. .....+..+.|..+. .++
T Consensus 289 ~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-l~~ 364 (711)
T 4hvt_A 289 PSD--ATLQGSFKEY-VFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKDR-VFL 364 (711)
T ss_dssp CTT--CEEEEEETTE-EEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSSC-EEE
T ss_pred CCc--ceEeeeECCE-EEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECCE-EEE
Confidence 221 1123344554 444321 357788898873211000000122222 234467888888763 444
Q ss_pred EEEcCCcE
Q 038533 325 AIAFSNKM 332 (337)
Q Consensus 325 ~~~~d~~i 332 (337)
+...++.-
T Consensus 365 ~~~~~~~~ 372 (711)
T 4hvt_A 365 ATYDNVVA 372 (711)
T ss_dssp EEEETTEE
T ss_pred EEEECCEE
Confidence 55556543
No 357
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=69.44 E-value=54 Score=28.18 Aligned_cols=108 Identities=12% Similarity=0.162 Sum_probs=57.2
Q ss_pred ceeEEEeC-CCc-EEEEEcCCCeEEEEECCCCCCceeeecC---C------CCCCCceEEEeecC---CCcEEEEEEecC
Q 038533 171 EVYDICWG-EAR-VFASVSADGSVRIFDLRDKEHSTIIYES---P------QPDTPLLRLAWNKQ---DLRYMATILMDS 236 (337)
Q Consensus 171 ~v~~~~~~-~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~---~------~~~~~i~~~~~~~~---~~~~l~~~~~d~ 236 (337)
....|+|. ++. .++++...|.|++++.........+... . .....+..|+|+|. ++.+.++-+.+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 45788998 553 4666778899999975432111111100 0 11456889999982 234444333211
Q ss_pred -----------CEEEEEECCCC--C-------CCeEEee--cccceeeEEEeCCCCCCeEEEEcC
Q 038533 237 -----------NKVVILDIRSP--T-------LPVAELE--RHRACVNAIAWAPQSRRHICSVGD 279 (337)
Q Consensus 237 -----------~~i~i~d~~~~--~-------~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~ 279 (337)
..|.-|.+... . +.+..+. ........|+|.|||. +.++.+.
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~-LYv~~Gd 158 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGF-LYIILGD 158 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSC-EEEEECC
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCc-EEEEeCC
Confidence 12555665421 0 1122222 1123457899999998 5555543
No 358
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=61.88 E-value=1.1e+02 Score=29.15 Aligned_cols=31 Identities=19% Similarity=0.230 Sum_probs=22.2
Q ss_pred CCeEEEecCCCCcccCcCCccEEEEeCC-eEEEEecCCCC
Q 038533 72 PPTKLMFDPNSSSRKSSSNRHLLASSGD-FLRLWDVGDSS 110 (337)
Q Consensus 72 ~i~~i~~~~~~~~~~~~~~~~~l~~~~~-~v~vw~~~~~~ 110 (337)
.+.++...++.. .+++.+-| ++|+|++.+++
T Consensus 237 ~~~~~~~~~~~~--------~lftl~~D~~LRiWsl~t~~ 268 (950)
T 4gq2_M 237 TIISMIFLSTYN--------VLVMLSLDYKLKVLDLSTNQ 268 (950)
T ss_dssp CEEEEEEETTTT--------EEEEEETTCEEEEEETTTTE
T ss_pred eEEEEeecCCCc--------EEEEEECCCEEEEEECCCCC
Confidence 456667777766 24455557 99999999984
No 359
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=61.72 E-value=1.1e+02 Score=29.13 Aligned_cols=36 Identities=11% Similarity=0.297 Sum_probs=28.1
Q ss_pred CceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEE
Q 038533 215 PLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAE 253 (337)
Q Consensus 215 ~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~ 253 (337)
.+.++...+ +..++++.+.|.. +++|++.+ ++++.+
T Consensus 237 ~~~~~~~~~-~~~~lftl~~D~~-LRiWsl~t-~~~v~t 272 (950)
T 4gq2_M 237 TIISMIFLS-TYNVLVMLSLDYK-LKVLDLST-NQCVET 272 (950)
T ss_dssp CEEEEEEET-TTTEEEEEETTCE-EEEEETTT-TEEEEE
T ss_pred eEEEEeecC-CCcEEEEEECCCE-EEEEECCC-CCeEee
Confidence 456666666 7889999999998 99999988 444544
No 360
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=58.36 E-value=66 Score=25.33 Aligned_cols=198 Identities=10% Similarity=-0.006 Sum_probs=105.6
Q ss_pred CCeeEEEeecCCCCeEEEeeCCCcEEEEeC---CCccchhhhhccCCceeEEEeC--CCcEEEEEcCCCeEEEEECCCCC
Q 038533 127 APLTSFDWNEIEPKRIGTCSIDTTCTIWDI---EKGVVETQLIAHDKEVYDICWG--EARVFASVSADGSVRIFDLRDKE 201 (337)
Q Consensus 127 ~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~---~~~~~~~~~~~~~~~v~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~ 201 (337)
+.+..+.-.. ..+.++.-+.+|.++--.+ ........+. ....|..+... ++..++..+.+|.++-..+..-.
T Consensus 24 D~~~~~~~~~-t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~ 101 (276)
T 3no0_A 24 APVVNILRVP-FTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFE 101 (276)
T ss_dssp CCEEEEEEEE-TTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTT
T ss_pred CeEEEEEEEC-CCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhh
Confidence 4565555544 4556666677888775433 2221111133 34456555333 46789999999999998875432
Q ss_pred --C-ceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCC---CCC-----CeEEeecccceeeEEEeCCCC
Q 038533 202 --H-STIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRS---PTL-----PVAELERHRACVNAIAWAPQS 270 (337)
Q Consensus 202 --~-~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~---~~~-----~~~~~~~~~~~v~~~~~~~~~ 270 (337)
. -...... .....+..+.... +...++..+..|. +..++... .++ ..-.+.. ...|..+...+++
T Consensus 102 ~~~~G~~~i~l-kegD~l~~~~~~~-~~~~ill~T~~G~-~~r~~~~eip~~gR~a~Gv~~i~L~~-~d~vv~~~~~~~~ 177 (276)
T 3no0_A 102 YKAQGMPIIKL-TEGDEVVSIASSV-DETHILLFTKKGR-VARFSVREVPPSTPGARGVQGIKLEK-NDETSGLRIWNGE 177 (276)
T ss_dssp TCSTTEECSCC-CTTCCEEEEEECC-SSCEEEEEETTSE-EEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEEEESSC
T ss_pred hhcCCeEEEec-CCCCEEEEEEEeC-CCCEEEEEECCCE-EEEEEhhhCCCcCCCCCCEEEEccCC-CCEEEEEEEeCCC
Confidence 1 1111111 1234566655554 5567888888887 77776432 110 1111222 2345555444455
Q ss_pred CCeEEEEcCCCcEEEEeCCCCCCCCC--CCCCceeeeeCCCceeEEEEccCCCceEEEEcCCcEEE
Q 038533 271 RRHICSVGDDSQAFIWELPLPPVAGP--NGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQL 334 (337)
Q Consensus 271 ~~~l~~~~~dg~i~iw~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 334 (337)
. .++..+..|.++...+. ..... .+.....+ ...+.+..+........++..+.+|.+..
T Consensus 178 ~-~ll~~T~~G~~kr~~~~--e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir 239 (276)
T 3no0_A 178 P-YLLVITAKGRVKKISHE--EIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAFY 239 (276)
T ss_dssp S-EEEEEETTSCEEEEEGG--GSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCEEE
T ss_pred C-EEEEEeCCCcEEEeEHH--HcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEE
Confidence 5 78888889999988876 33221 11112222 23344554443333335667777776654
No 361
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=55.99 E-value=78 Score=25.44 Aligned_cols=150 Identities=5% Similarity=0.086 Sum_probs=80.4
Q ss_pred CCcEEEEEcCCCeEEEEECCCCCCce-----e-eecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECC---CC--
Q 038533 179 EARVFASVSADGSVRIFDLRDKEHST-----I-IYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIR---SP-- 247 (337)
Q Consensus 179 ~~~~l~~~~~dg~i~iwd~~~~~~~~-----~-~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~---~~-- 247 (337)
+...+++.+.+|.|+--.+..-+... . .... .....+..+.... ....++..+..|. ++-+... ..
T Consensus 7 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~l-ke~D~l~~~~~~~-~~~~ll~~T~~G~-~~~~~~~~ip~~~r 83 (312)
T 1suu_A 7 KENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDL-NDGDEIVIALCVN-THDYLFMISNEGK-LYLINAYEIKDSSR 83 (312)
T ss_dssp -CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCC-CTTCCEEEEEEEE-TTCEEEEEETTSE-EEEEEGGGSCC---
T ss_pred CCCEEEEEeCCCEEEEeEHHHhhccccCCCCceeccc-CCCCEEEEEEEEC-CCCEEEEEECCCe-EEEEEHHHCCCCCc
Confidence 45678899999999988765442111 0 1111 1234455555554 5566777777876 6655543 11
Q ss_pred ---CCCe---EEeecccceeeEEEeCC---CCCCeEEEEcCCCcEEEEeCCCCCCCCC--CCCCceeeeeCCCceeEEEE
Q 038533 248 ---TLPV---AELERHRACVNAIAWAP---QSRRHICSVGDDSQAFIWELPLPPVAGP--NGIDPMSMYSAGSEINQLQW 316 (337)
Q Consensus 248 ---~~~~---~~~~~~~~~v~~~~~~~---~~~~~l~~~~~dg~i~iw~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~ 316 (337)
+.++ -.+.. ...|..+...+ +.. .|+..+..|.++--.+. .+... .+.....+.. .+.+..+..
T Consensus 84 ~~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~-~ll~~T~~G~~kr~~l~--~~~~~r~~G~~~i~L~~-~d~lv~~~~ 158 (312)
T 1suu_A 84 ASKGQNISELINLGD-QEEILTIKNSKDLTDDA-YLLLTTASGKIARFEST--DFKAVKSRGVIVIKLND-KDFVTSAEI 158 (312)
T ss_dssp ----CBGGGTSCCCT-TCCEEEEEEESCCCTTC-EEEEEETTSEEEEEEGG--GGCC----CEECBCCCT-TCCEEEEEE
T ss_pred cCCCcChhhccCCCC-CCEEEEEEEeccCCCCC-EEEEEeCCCeEEEEEHH--HhhccCCCcEEEEecCC-CCEEEEEEE
Confidence 1111 01221 22344443222 344 78888999999988886 43221 1222222222 455666555
Q ss_pred ccCCCceEEEEcCCcEEEEe
Q 038533 317 SPAQPDWLAIAFSNKMQLLK 336 (337)
Q Consensus 317 ~~~~~~l~~~~~d~~i~iw~ 336 (337)
...+..++..+.+|.+..+.
T Consensus 159 ~~~~~~i~l~T~~G~~~r~~ 178 (312)
T 1suu_A 159 VFKDEKVICLSKKGSAFIFN 178 (312)
T ss_dssp ECTTCEEEEEETTSEEEEEE
T ss_pred eCCCCEEEEEeCCCcEEEEE
Confidence 54455688888888776654
No 362
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=55.12 E-value=1.3e+02 Score=27.68 Aligned_cols=202 Identities=14% Similarity=0.008 Sum_probs=0.0
Q ss_pred CCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhhcc-------CCceeEEEeC--CCcEEEEEcCCCe------
Q 038533 127 APLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLIAH-------DKEVYDICWG--EARVFASVSADGS------ 191 (337)
Q Consensus 127 ~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~-------~~~v~~~~~~--~~~~l~~~~~dg~------ 191 (337)
..|..|+++|.+.+.+.++...+.|...+ ..++.-..+..+ ...|.+|+++ +.+.++.+.....
T Consensus 23 g~i~~i~~~p~~~~~~~~~~~~ggv~rS~-D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~ 101 (737)
T 2cn3_A 23 GFMPGIVFNETEKDLIYARAAIGGAYRWD-PSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPN 101 (737)
T ss_dssp SCCCEEEECSSSTTCEEEECSSSCEEEEE-TTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCC
T ss_pred ceeeEEEECCCCCCEEEEEecCCcEEEeC-CCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccC
Q ss_pred -EEEEECCCCCCceeeecCCCCCCC-------ceEEEeecCCCcEEEEEEec-CCEEEEEECCCCCCCeEEeecccce--
Q 038533 192 -VRIFDLRDKEHSTIIYESPQPDTP-------LLRLAWNKQDLRYMATILMD-SNKVVILDIRSPTLPVAELERHRAC-- 260 (337)
Q Consensus 192 -i~iwd~~~~~~~~~~~~~~~~~~~-------i~~~~~~~~~~~~l~~~~~d-~~~i~i~d~~~~~~~~~~~~~~~~~-- 260 (337)
..+|-...+-..-........... +..++++|.+...++++... .. +|-....++.-..+..-...
T Consensus 102 ~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~g---l~~S~DgG~tW~~~~~~~~~~~ 178 (737)
T 2cn3_A 102 MGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGNG---LWRSTDYGVTWSKVESFPNPGT 178 (737)
T ss_dssp CCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTCC---EEEESSTTSSCEECTTCCCCCC
T ss_pred CccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccCCc---EEEeCCCCcceecccCCCCCcc
Q ss_pred ---------------eeEEEeCCCCCC------eEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccC
Q 038533 261 ---------------VNAIAWAPQSRR------HICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPA 319 (337)
Q Consensus 261 ---------------v~~~~~~~~~~~------~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 319 (337)
+..+.++|.... .+..+..++.-.||.-. ...+ ......-.........+.++|+
T Consensus 179 ~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~S~--DgG~--tW~~~~~~p~~~~~~~~~~~~~ 254 (737)
T 2cn3_A 179 YIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIYRST--DGGV--TWKAVPGQPKGLLPHHGVLASN 254 (737)
T ss_dssp CBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSSCCEEEES--STTS--CCEECTTCCCSSEEEEEEECTT
T ss_pred cccCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCCccEEEEc--CCCC--ceEECCCCCCcccceEEEECCC
Q ss_pred CCceEEEEcC-------CcEEEEe
Q 038533 320 QPDWLAIAFS-------NKMQLLK 336 (337)
Q Consensus 320 ~~~l~~~~~d-------~~i~iw~ 336 (337)
+..+++.... ..-.||+
T Consensus 255 ~~l~~~~~d~~g~y~~~~~g~v~~ 278 (737)
T 2cn3_A 255 GMLYITYGDTCGPYDGNGKGQVWK 278 (737)
T ss_dssp SEEEEEEESSCCSSCCSCCEEEEE
T ss_pred CeEEEEecCCCCccccccCceEEE
No 363
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=54.78 E-value=18 Score=33.06 Aligned_cols=36 Identities=8% Similarity=0.121 Sum_probs=28.1
Q ss_pred CeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhhh
Q 038533 128 PLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQLI 166 (337)
Q Consensus 128 ~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~ 166 (337)
.|.++.+ +..++++-+.|.++|+|++++++++....
T Consensus 223 ~Is~~~~---~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 223 VISCKLF---HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEEE---TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEecc---CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 4655554 46799999999999999999998665443
No 364
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=48.18 E-value=1.1e+02 Score=24.82 Aligned_cols=191 Identities=11% Similarity=0.071 Sum_probs=101.1
Q ss_pred CCeEEEeeCCCcEEEEeCCCccc---------hhhhhccCCceeEEEeC-CCcEEEEEcCCCeEEEE---ECCCCCC---
Q 038533 139 PKRIGTCSIDTTCTIWDIEKGVV---------ETQLIAHDKEVYDICWG-EARVFASVSADGSVRIF---DLRDKEH--- 202 (337)
Q Consensus 139 ~~~l~~~~~dg~i~v~d~~~~~~---------~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iw---d~~~~~~--- 202 (337)
...+++.+.+|.|+--.+.+-+. -..++. .+.+..+... ....++.-+..|.++-. ++.....
T Consensus 3 E~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke-~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~ 81 (327)
T 3uc1_A 3 EDVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQ-DDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTAR 81 (327)
T ss_dssp CEEEEEEETTSEEEEEEHHHHHHHC--------CCCCG-GGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSC
T ss_pred ccEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCC-CCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCC
Confidence 45788888999999766432111 111221 2334433333 55566666667775544 4443211
Q ss_pred ---ceeeecCCCCCCCceEEEeecC--CCcEEEEEEecCCEEEEEECCCCCCC----e--EEeecccceeeEEEeCCCCC
Q 038533 203 ---STIIYESPQPDTPLLRLAWNKQ--DLRYMATILMDSNKVVILDIRSPTLP----V--AELERHRACVNAIAWAPQSR 271 (337)
Q Consensus 203 ---~~~~~~~~~~~~~i~~~~~~~~--~~~~l~~~~~d~~~i~i~d~~~~~~~----~--~~~~~~~~~v~~~~~~~~~~ 271 (337)
...+... .....|..+..-+. +..++++.+.+|. ++-..+...... + ..+... ..+..+.......
T Consensus 82 G~~i~~~l~l-~~~e~i~~~~~~~~~~~e~~~v~~T~~G~-iKr~~l~~~~~~~r~G~~~i~lke~-D~lv~~~~~~~~d 158 (327)
T 3uc1_A 82 GQHVANLLAF-QPEERIAQVIQIRGYTDAPYLVLATRNGL-VKKSKLTDFDSNRSGGIVAVNLRDN-DELVGAVLCSAGD 158 (327)
T ss_dssp CEEHHHHTTC-CTTCCEEEEEEESSTTSSSEEEEEETTSE-EEEEEGGGGCCCCSSCEESCBCCTT-CCEEEEEEECTTC
T ss_pred CEEHHHccCC-CCCCEEEEEEEeccCCCCCEEEEEcCCCE-EEEeEHHHhhccccCceEEEEECCC-CEEEEEEEecCCC
Confidence 0111112 22355665543331 4678999999998 888876542211 1 122222 3344444434444
Q ss_pred CeEEEEcCCCcEEEEeCCC---CCCCCC-CCCCceeeeeCCCceeEEEEccCCCceEEEEcCCcEEEE
Q 038533 272 RHICSVGDDSQAFIWELPL---PPVAGP-NGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQLL 335 (337)
Q Consensus 272 ~~l~~~~~dg~i~iw~~~~---~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw 335 (337)
.|+..+..|.+..+.... +...+. .|.....+ .....|.++...+.+..++.++..|.++.-
T Consensus 159 -~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L-~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt 224 (327)
T 3uc1_A 159 -DLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRF-NIDDRLLSLNVVREGTYLLVATSGGYAKRT 224 (327)
T ss_dssp -EEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCC-CTTCCEEEEEECCTTCEEEEEETTSEEEEE
T ss_pred -EEEEEECCCeEEEEECcccccCcCCcCCCCeeeecC-CCCCEEEEEEEECCCCEEEEEeCCCcEEEE
Confidence 677777789887777651 122221 12211122 235567777766666678888888877653
No 365
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=48.05 E-value=12 Score=36.54 Aligned_cols=37 Identities=11% Similarity=0.115 Sum_probs=29.3
Q ss_pred CeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhhh
Q 038533 128 PLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQL 165 (337)
Q Consensus 128 ~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~ 165 (337)
.+.+++..+ +..++++-+.|+++|+|++.+++++.+.
T Consensus 239 ~~vs~~~~~-~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEET-TTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccC-CccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 445566665 7789999999999999999999866543
No 366
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=45.66 E-value=1.3e+02 Score=25.04 Aligned_cols=176 Identities=10% Similarity=0.025 Sum_probs=86.5
Q ss_pred eEEEEecCCC--CccceeeecCCCCCcccCCeeEEEee---cC---CCCeEEEee-CCCcEEEEeCCCccchhhhh----
Q 038533 100 FLRLWDVGDS--SIEPVAVLNNSKSSEFCAPLTSFDWN---EI---EPKRIGTCS-IDTTCTIWDIEKGVVETQLI---- 166 (337)
Q Consensus 100 ~v~vw~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~---~~---~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~---- 166 (337)
+|.+||+.++ +......+...... ....+..+++. |. +..++..+. ..+-|.|+|+.+++..+...
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~-~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~ 202 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVE-KPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFK 202 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCC-CGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGS
T ss_pred eEEEEECCCCCceeEEEEECCHHhcc-cCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCc
Confidence 7889999998 54333344322111 11567788877 21 123333333 46789999999887433221
Q ss_pred cc--------------CCceeEEEeC-C----CcEEEEEcCCC-eEEEEE---CCCCCCc--eeeecCCCCCCCceEEEe
Q 038533 167 AH--------------DKEVYDICWG-E----ARVFASVSADG-SVRIFD---LRDKEHS--TIIYESPQPDTPLLRLAW 221 (337)
Q Consensus 167 ~~--------------~~~v~~~~~~-~----~~~l~~~~~dg-~i~iwd---~~~~~~~--~~~~~~~~~~~~i~~~~~ 221 (337)
.. ...+..++.+ + ++.|+.....+ .+.--. ++..... .......+.......++.
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~ 282 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAY 282 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEE
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEE
Confidence 10 1246667777 3 45555544433 232222 1222111 111111111233345566
Q ss_pred ecCCCcEEEEEEecCCEEEEEECCC-CC--CCeEEeec--ccceeeEEEeCCCCCCeEEEEc
Q 038533 222 NKQDLRYMATILMDSNKVVILDIRS-PT--LPVAELER--HRACVNAIAWAPQSRRHICSVG 278 (337)
Q Consensus 222 ~~~~~~~l~~~~~d~~~i~i~d~~~-~~--~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~ 278 (337)
++.+|.++++--.... |..|+..+ +- .....+.. .-..+..+.+.+++. +.+..+
T Consensus 283 D~~~G~ly~~~~~~~a-I~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~-Lwv~sn 342 (381)
T 3q6k_A 283 DPKTKVIFFAEANTKQ-VSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGG-LWFMSN 342 (381)
T ss_dssp CTTTCEEEEEESSSSE-EEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSC-EEEEEC
T ss_pred eCCCCeEEEEeccCCe-EEEEeCCCCccccCceEEEEECCCccccCeEEECCCCe-EEEEEC
Confidence 5425555555444444 99999875 22 11222221 112456777777765 444443
No 367
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=45.21 E-value=1.1e+02 Score=23.82 Aligned_cols=146 Identities=14% Similarity=0.143 Sum_probs=77.5
Q ss_pred cEEEEEcCCCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEE---C---CCCCCCeE--
Q 038533 181 RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILD---I---RSPTLPVA-- 252 (337)
Q Consensus 181 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d---~---~~~~~~~~-- 252 (337)
...++.+.+|.|+--........... . .....+..+.... +...++..+..|. ++-+. + +..+.++.
T Consensus 3 ~v~v~lT~~G~iKr~~~~~~~~~~~~--l-ke~D~l~~~~~~~-t~~~ll~~T~~Gr-~~~~~~~elp~~r~~G~~i~~~ 77 (256)
T 1zvt_A 3 PVTIVLSQMGWVRSAKGHDIDAPGLN--Y-KAGDSFKAAVKGK-SNQPVVFVDSTGR-SYAIDPITLPSARGQGEPLTGK 77 (256)
T ss_dssp EEEEEEETTSEEEEEESSCCCSTTSC--C-CTTCCEEEEEEEE-TTSCEEEEETTSE-EEEECGGGSCCSSSCCEEGGGT
T ss_pred CEEEEEeCCCEEEEeeCCcCCceecc--C-CCCCEEEEEEEeC-CCCEEEEEeCCCe-EEEEEHHHCCCcCCCCeEeeee
Confidence 45667788898887665442211111 1 1234555554444 4556666677776 55443 3 22122111
Q ss_pred -EeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCC--CCCCCceeeeeCCCceeEEEEc-cCCCceEEEEc
Q 038533 253 -ELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAG--PNGIDPMSMYSAGSEINQLQWS-PAQPDWLAIAF 328 (337)
Q Consensus 253 -~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~ 328 (337)
.+. ....|.++....++. .|+.++..|.++...+. .... ..+.....+. -.+.+..+... ..+..++..+.
T Consensus 78 i~L~-~~e~Iv~~~~~~~~~-~lll~T~~G~~Kr~~~~--e~~~~~r~G~~~i~L~-~~d~lv~~~~~~~~~~~i~l~T~ 152 (256)
T 1zvt_A 78 LTLP-PGATVDHMLMESDDQ-KLLMASDAGYGFVCTFN--DLVARNRAGKALITLP-ENAHVMPPVVIEDASDMLLAITQ 152 (256)
T ss_dssp CCCC-TTCCEEEEECCCTTC-EEEEEBTTSEEEEEEGG--GGCCCSTTCEECBCCC-TTCCBCCCEECCCTTCEEEEEET
T ss_pred ecCC-CCCEEEEEEEeCCCC-EEEEEeCCCeEEEeEHH--HhcccCcCceEEEEEC-CCCEEEEEEEecCCCCEEEEEcC
Confidence 122 133566664434455 78889999999999886 3321 1122222232 23455555555 23446888888
Q ss_pred CCcEEEEe
Q 038533 329 SNKMQLLK 336 (337)
Q Consensus 329 d~~i~iw~ 336 (337)
+|.+..+.
T Consensus 153 ~G~~lrf~ 160 (256)
T 1zvt_A 153 AGRMLMFP 160 (256)
T ss_dssp TSEEEEEE
T ss_pred CCeEEEEE
Confidence 88776654
No 368
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=43.32 E-value=2e+02 Score=26.53 Aligned_cols=151 Identities=9% Similarity=-0.031 Sum_probs=75.1
Q ss_pred CCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCcc---chhh-hh----c----cCCceeEEEeCC---CcEEEEEcC---
Q 038533 127 APLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGV---VETQ-LI----A----HDKEVYDICWGE---ARVFASVSA--- 188 (337)
Q Consensus 127 ~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~---~~~~-~~----~----~~~~v~~~~~~~---~~~l~~~~~--- 188 (337)
..|.+|+++|.+.+.+.++...|.|...+ ..++ .+.. +. + ....+.++++++ +.+++..+.
T Consensus 21 g~i~~i~~~p~~~~~~y~~~~~ggv~~S~-DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~~ 99 (763)
T 3a0f_A 21 GFISGLVAHPTEKDLIYARTDIGGTYRWN-AAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYVQ 99 (763)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCTT
T ss_pred CceeEEEeCCCCCCEEEEEeccCcEEEEC-CCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEeccccc
Confidence 68999999997778888887667665443 2232 2211 10 0 123588888873 334443331
Q ss_pred -CCeEEEEECC-CCCCceeeecCCC----CCCC--ceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEEeec----
Q 038533 189 -DGSVRIFDLR-DKEHSTIIYESPQ----PDTP--LLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAELER---- 256 (337)
Q Consensus 189 -dg~i~iwd~~-~~~~~~~~~~~~~----~~~~--i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~~~~---- 256 (337)
.....||-.. .++.=..+..... .... ...++++|.+...++++...+. +|-....++.-..+..
T Consensus 100 ~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~~---l~~S~DgG~TW~~~~~~~~~ 176 (763)
T 3a0f_A 100 WDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQG---LWRSTDRAQTWSRMNQLPDS 176 (763)
T ss_dssp TCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSSC---EEEESSTTSSCEECTTSCCC
T ss_pred CCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeCCCc---EEEECCCCcCccccccCccc
Confidence 1113344333 2322112111100 0111 1468888866666666665544 3333332332222221
Q ss_pred --ccceeeEEEeCCCCCCeEEEEcCCC
Q 038533 257 --HRACVNAIAWAPQSRRHICSVGDDS 281 (337)
Q Consensus 257 --~~~~v~~~~~~~~~~~~l~~~~~dg 281 (337)
....+..++++|..+..++.+..++
T Consensus 177 ~~~~~~~~~i~~~p~~~~~~~~~~~~~ 203 (763)
T 3a0f_A 177 STYGIGIISVIFDPKNVGTAYVASHAV 203 (763)
T ss_dssp SCTTTCEEEEEECSSSTTCEEEEESST
T ss_pred CCCccceEEEEECCCCCCEEEEEEeCC
Confidence 1134778899886543455555554
No 369
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=42.26 E-value=89 Score=30.56 Aligned_cols=36 Identities=11% Similarity=0.297 Sum_probs=27.1
Q ss_pred CceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCCeEE
Q 038533 215 PLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLPVAE 253 (337)
Q Consensus 215 ~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~~~~ 253 (337)
.+.+++..+ +..++++.+.|+. +++|++.+ ++++.+
T Consensus 239 ~~vs~~~~~-~~~~lftL~~D~~-LRiWsl~t-~~~v~t 274 (1139)
T 4fhn_B 239 TIISMIFLS-TYNVLVMLSLDYK-LKVLDLST-NQCVET 274 (1139)
T ss_dssp CBSCCEEET-TTTEEEEEBTTCE-EEEEETTT-TEEEEE
T ss_pred eeEEeeccC-CccEEEEEeCCCE-EEEEECCC-CCeEEe
Confidence 344555555 7889999999998 99999988 444444
No 370
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=35.86 E-value=1.1e+02 Score=27.21 Aligned_cols=59 Identities=15% Similarity=0.200 Sum_probs=34.3
Q ss_pred eeEEEeCCCCCCeEEEEcCC----------C--cEEEEeCCCCCCCCCCCCCceeeeeCCCceeEEEEccCCCceEEE
Q 038533 261 VNAIAWAPQSRRHICSVGDD----------S--QAFIWELPLPPVAGPNGIDPMSMYSAGSEINQLQWSPAQPDWLAI 326 (337)
Q Consensus 261 v~~~~~~~~~~~~l~~~~~d----------g--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 326 (337)
.-.|+|+|.|. +++.-..+ + .+.+.+...++ ...+........++.++|+||++.|+..
T Consensus 478 PDNL~fd~~G~-LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~------~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPATGE------IRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCC-EEEEECCCCCCSGGGTTTCSCEEEEECTTTCC------EEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCC-EEEEecCCCcccccccccccceEEEEeCCCCe------EEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 45689999998 55554322 1 23333333111 0112222345789999999999888764
No 371
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=33.78 E-value=1.7e+02 Score=22.91 Aligned_cols=182 Identities=10% Similarity=0.011 Sum_probs=99.2
Q ss_pred EEEEeC-C---eEEEEecCCCCccceeeecCCCCCcccCCeeEEEeecC-CCCeEEEeeCCCcEEEEeCCCcc------c
Q 038533 93 LLASSG-D---FLRLWDVGDSSIEPVAVLNNSKSSEFCAPLTSFDWNEI-EPKRIGTCSIDTTCTIWDIEKGV------V 161 (337)
Q Consensus 93 ~l~~~~-~---~v~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~------~ 161 (337)
++...+ + .+.+|++.......+ +.. . ..|..+.. +. +...++..+.+|.++-..+..-. .
T Consensus 38 ll~fT~~G~v~~~~~~~lp~~~~~~l--l~~-~-----e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~ 108 (276)
T 3no0_A 38 LFLVSNRGRVYWIAGSQALQGSKVSL--KSR-E-----EKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEYKAQGMP 108 (276)
T ss_dssp EEEEETTSEEEEECSHHHHTSEECCC--SST-T-----CCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEE
T ss_pred EEEEcCCCeEEEEEhhhCccCccccc--CCC-C-----CEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeE
Confidence 544444 3 566677654321111 322 1 45666543 31 35689999999999999875432 1
Q ss_pred hhhhhccCCceeEEEeC-CCcEEEEEcCCCeEEEEECCCCCC------ceeeecCCCCCCCceEEEeecCCCcEEEEEEe
Q 038533 162 ETQLIAHDKEVYDICWG-EARVFASVSADGSVRIFDLRDKEH------STIIYESPQPDTPLLRLAWNKQDLRYMATILM 234 (337)
Q Consensus 162 ~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~------~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~ 234 (337)
...++. .+.+..+... ....++..+..|.+..+....-.. -...... .....+..+...+ ++..++..+.
T Consensus 109 ~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L-~~~d~vv~~~~~~-~~~~ll~~T~ 185 (276)
T 3no0_A 109 IIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKL-EKNDETSGLRIWN-GEPYLLVITA 185 (276)
T ss_dssp CSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCC-CTTCCEEEEEEES-SCSEEEEEET
T ss_pred EEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEcc-CCCCEEEEEEEeC-CCCEEEEEeC
Confidence 122232 3445555444 566788888899988776532111 0111111 1235566665554 5668888888
Q ss_pred cCCEEEEEECCCC------CCCeEEeecccceeeEEEeCCCCCCeEEEEcCCCcEEE--EeCC
Q 038533 235 DSNKVVILDIRSP------TLPVAELERHRACVNAIAWAPQSRRHICSVGDDSQAFI--WELP 289 (337)
Q Consensus 235 d~~~i~i~d~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i--w~~~ 289 (337)
.|. ++...+... ++-+..+. ..+.+..+....... .++..+.+|.+.. ++..
T Consensus 186 ~G~-~kr~~~~e~~~~~R~gkGv~~i~-~~~~lv~~~~~~~~~-~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 186 KGR-VKKISHEEIPKTNRGVKGTEVSG-TKDTLVDLIPIKEEV-ELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp TSC-EEEEEGGGSCCCCTTCCCEECCC-SSSCEEEEEEESSEE-EEEEEETTSCEEEEEEEGG
T ss_pred CCc-EEEeEHHHcccCCCCCcceEEEc-CCCcEEEEEEeCCCC-EEEEEcCCCeEEEeeeCHH
Confidence 888 887776431 11122221 223344433322333 5666677888877 8776
No 372
>3kvp_A Uncharacterized protein YMZC; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus subtilis}
Probab=33.47 E-value=72 Score=18.75 Aligned_cols=26 Identities=8% Similarity=0.176 Sum_probs=21.3
Q ss_pred cceEEEeeeeccCcceEEEEEecCCCcceec
Q 038533 31 GQRIAVGSFIEDYTNRVDVVSFEPESLSIKT 61 (337)
Q Consensus 31 ~~~la~g~~~~~~d~~i~i~~~~~~~~~~~~ 61 (337)
.+.+++-. +|.|+||.++..+..+..
T Consensus 29 ~nhFgv~e-----~g~iKIykyde~tNeI~L 54 (72)
T 3kvp_A 29 HNHFGVME-----DGYIKIYEYNESRNEVKL 54 (72)
T ss_dssp TTEEEEEE-----TTEEEEEEEETTTTEEEE
T ss_pred CCEEEEEe-----CCEEEEEEeCCCCCeEEE
Confidence 67777777 899999999998876654
No 373
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=31.64 E-value=2.2e+02 Score=23.50 Aligned_cols=196 Identities=10% Similarity=0.014 Sum_probs=0.0
Q ss_pred CeeEEEeecCCCCeEEEeeCCCcEEEEeCCCc------------cchhhhhccCCceeEEEeC-CCcEEEEEcCCCeEEE
Q 038533 128 PLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKG------------VVETQLIAHDKEVYDICWG-EARVFASVSADGSVRI 194 (337)
Q Consensus 128 ~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~------------~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~i 194 (337)
.|..++-.. ...+.-..||.|..|-.... .+...-......+..++.+ -..+.+....||.|..
T Consensus 54 ~i~~i~~G~---~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~ 130 (389)
T 3kci_A 54 RPVQLIGGE---QTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 130 (389)
T ss_dssp CEEEEEEET---TEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEE
T ss_pred ceEEEEeCC---CeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEE
Q ss_pred E-----------ECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCC-----------CeE
Q 038533 195 F-----------DLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTL-----------PVA 252 (337)
Q Consensus 195 w-----------d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~-----------~~~ 252 (337)
| +......+..+... ....|..++- .....++...++. |+.|-....++ |..
T Consensus 131 wG~n~~GqLG~g~~~~~~~p~~v~~l--~~~~i~~va~---G~~hs~alt~~G~-v~~wG~n~~GqLG~~~~~~~~~p~~ 204 (389)
T 3kci_A 131 WGEAEDGKLGHGNRSPCDRPRVIESL--RGIEVVDVAA---GGAHSACVTAAGD-LYTWGKGRYGRLGHSDSEDQLKPKL 204 (389)
T ss_dssp EECCGGGTTCSSSCCCEEEEEECGGG--TTSCEEEEEE---CSSEEEEEETTSC-EEEEECCGGGTTCSSSCCCEEEEEE
T ss_pred EeCCCCCcCCCCCCccCcCCeEeccc--CCCeEEEEEe---CcCeEEEEeCCCe-EEEeCCCCCCCcCCCCCcccccceE
Q ss_pred EeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCC-----CCCCCceeeeeCCCceeEEEEccCCCceEEEE
Q 038533 253 ELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAG-----PNGIDPMSMYSAGSEINQLQWSPAQPDWLAIA 327 (337)
Q Consensus 253 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 327 (337)
........|..++...... ..+.-..||.|..|-.. ...+ .................-+..+......++..
T Consensus 205 v~~~~~~~v~~ia~G~g~~-~t~~l~~~G~v~~wG~n--~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~hs~alt 281 (389)
T 3kci_A 205 VEALQGHRVVDIACGSGDA-QTLCLTDDDTVWSWGDG--DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 281 (389)
T ss_dssp CGGGTTSCEEEEEECCSSC-EEEEEETTTEEEEEECC--GGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETTEEEEEE
T ss_pred ecccCCCeEEEEEEcCCCc-EEEEEccCCEEEEEeCC--CCCCCCCCCCCCccccEEecccCCCcEEEEeCCCCEEEEEe
Q ss_pred cCCcEEEE
Q 038533 328 FSNKMQLL 335 (337)
Q Consensus 328 ~d~~i~iw 335 (337)
.||.|..|
T Consensus 282 ~~G~v~~w 289 (389)
T 3kci_A 282 KSGAVYTW 289 (389)
T ss_dssp TTSCEEEE
T ss_pred CCCeEEEE
No 374
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=31.08 E-value=58 Score=29.83 Aligned_cols=28 Identities=14% Similarity=0.202 Sum_probs=23.6
Q ss_pred CCcEEEEEcCCCeEEEEECCCCCCceee
Q 038533 179 EARVFASVSADGSVRIFDLRDKEHSTII 206 (337)
Q Consensus 179 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 206 (337)
+..++++.+.|.++|+|++++++.....
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred CCcEEEEEEcCCeEEEEEcCCCceEEee
Confidence 5789999999999999999998754443
No 375
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=30.15 E-value=1.8e+02 Score=26.03 Aligned_cols=58 Identities=17% Similarity=0.111 Sum_probs=34.5
Q ss_pred eEEEeecCCCcEEEEEEecC-----------CEEEEEECCCCCCCeEEeecc-cceeeEEEeCCCCCCeEEEE
Q 038533 217 LRLAWNKQDLRYMATILMDS-----------NKVVILDIRSPTLPVAELERH-RACVNAIAWAPQSRRHICSV 277 (337)
Q Consensus 217 ~~~~~~~~~~~~l~~~~~d~-----------~~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~ 277 (337)
-.|+|+| .+++++.-..+. ..+.+.+..+ ++....+..+ ...++.++|+|+++ .|+..
T Consensus 479 DNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~-g~~~rf~~~P~gaE~TG~~fspDg~-tlfvn 548 (592)
T 3zwu_A 479 DGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPAT-GEIRRFMVGPIGCEVTGISFSPDQK-TLFVG 548 (592)
T ss_dssp EEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTT-CCEEEEEECCTTCEEEEEEECTTSS-EEEEE
T ss_pred cceEECC-CCCEEEEecCCCcccccccccccceEEEEeCCC-CeEEEEEeCCCCccCcCeeECCCCC-EEEEE
Confidence 4588998 788665533221 1255555554 3333333333 45899999999998 44443
No 376
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=29.36 E-value=2.3e+02 Score=22.94 Aligned_cols=201 Identities=7% Similarity=0.008 Sum_probs=105.9
Q ss_pred CCeeEEEeecCCCCeEEEeeCCCcEEEEe---CCC------ccchhhhh--ccCCceeEEE-eC---CCcEEEEEcCCCe
Q 038533 127 APLTSFDWNEIEPKRIGTCSIDTTCTIWD---IEK------GVVETQLI--AHDKEVYDIC-WG---EARVFASVSADGS 191 (337)
Q Consensus 127 ~~i~~~~~~~~~~~~l~~~~~dg~i~v~d---~~~------~~~~~~~~--~~~~~v~~~~-~~---~~~~l~~~~~dg~ 191 (337)
+.+..+.-.. ..+.++.-+..|.++-.. +.. |.++..+- .....|.++. .. ++..++.++.+|.
T Consensus 42 D~~~~~~~~~-t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~ 120 (327)
T 3uc1_A 42 DIVAHFFVCS-THDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGL 120 (327)
T ss_dssp GCEEEEEEEE-TTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSE
T ss_pred CEEEEEEEeC-CCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCE
Confidence 3444444433 455666666678766554 332 23322221 1234455543 33 3679999999999
Q ss_pred EEEEECCCCCCc----eeeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECC--C---CCCC---e--EEeecc
Q 038533 192 VRIFDLRDKEHS----TIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIR--S---PTLP---V--AELERH 257 (337)
Q Consensus 192 i~iwd~~~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~--~---~~~~---~--~~~~~~ 257 (337)
++--.+...... ....... ....+..+.... ....++..+..|. +..+... . .+.. + -.+. .
T Consensus 121 iKr~~l~~~~~~~r~G~~~i~lk-e~D~lv~~~~~~-~~d~ill~T~~G~-~~rf~~~~~eip~~gr~a~Gv~~i~L~-~ 196 (327)
T 3uc1_A 121 VKKSKLTDFDSNRSGGIVAVNLR-DNDELVGAVLCS-AGDDLLLVSANGQ-SIRFSATDEALRPMGRATSGVQGMRFN-I 196 (327)
T ss_dssp EEEEEGGGGCCCCSSCEESCBCC-TTCCEEEEEEEC-TTCEEEEEETTSE-EEEEECCTTTSCCCCTTSBCEESSCCC-T
T ss_pred EEEeEHHHhhccccCceEEEEEC-CCCEEEEEEEec-CCCEEEEEECCCe-EEEEECcccccCcCCcCCCCeeeecCC-C
Confidence 999886543211 1111121 235566665554 5567777888887 7766655 2 1111 0 1122 2
Q ss_pred cceeeEEEeCCCCCCeEEEEcCCCcEEEEeCCCCCCCCC----CCCCceeeeeCCCceeEEEEccCCCceEEEEcCCcEE
Q 038533 258 RACVNAIAWAPQSRRHICSVGDDSQAFIWELPLPPVAGP----NGIDPMSMYSAGSEINQLQWSPAQPDWLAIAFSNKMQ 333 (337)
Q Consensus 258 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 333 (337)
...|.++...+.+. .++..+..|.++.-.+. ..... .+.....+..-.+.+..+....+...++..+.+|.+.
T Consensus 197 ~d~Vv~~~~~~~~~-~ll~~T~~G~~Krt~l~--e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~i 273 (327)
T 3uc1_A 197 DDRLLSLNVVREGT-YLLVATSGGYAKRTAIE--EYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVI 273 (327)
T ss_dssp TCCEEEEEECCTTC-EEEEEETTSEEEEEEGG--GSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEE
T ss_pred CCEEEEEEEECCCC-EEEEEeCCCcEEEEEHH--HccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEE
Confidence 34566665555555 78888999999888876 33211 1111112222133454444444444566667666654
Q ss_pred EE
Q 038533 334 LL 335 (337)
Q Consensus 334 iw 335 (337)
-+
T Consensus 274 r~ 275 (327)
T 3uc1_A 274 RT 275 (327)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 377
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=28.35 E-value=1.3e+02 Score=26.13 Aligned_cols=62 Identities=10% Similarity=-0.054 Sum_probs=36.7
Q ss_pred eEEEEcCCCcEEEEeCCCCCCCCCC-CCCce--eeeeCCCceeEEEEccCCCceEEEEcCCcEEE
Q 038533 273 HICSVGDDSQAFIWELPLPPVAGPN-GIDPM--SMYSAGSEINQLQWSPAQPDWLAIAFSNKMQL 334 (337)
Q Consensus 273 ~l~~~~~dg~i~iw~~~~~~~~~~~-~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 334 (337)
++..|+.+|.|.=.-+......... ..... .......+|..|.++++...|++++.++.++|
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 6788899998654433211100000 00111 22234678999999999999999998877665
No 378
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=25.89 E-value=3.3e+02 Score=24.26 Aligned_cols=61 Identities=15% Similarity=0.115 Sum_probs=35.9
Q ss_pred CceEEEeecCCCcEEEEEEec-----------CCEEEEEECCCCCCCeEEeecc-cceeeEEEeCCCCCCeEEEE
Q 038533 215 PLLRLAWNKQDLRYMATILMD-----------SNKVVILDIRSPTLPVAELERH-RACVNAIAWAPQSRRHICSV 277 (337)
Q Consensus 215 ~i~~~~~~~~~~~~l~~~~~d-----------~~~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~ 277 (337)
....|.|++ ++.+.+..... ...+..++..+ ++....+... ...++.++|+||++.+++..
T Consensus 477 sPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~t-Gel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPAT-GEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTT-CCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCC-CeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 456788998 77776633211 11366666655 3333333322 35789999999999444443
No 379
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=24.07 E-value=2.2e+02 Score=24.72 Aligned_cols=57 Identities=7% Similarity=0.077 Sum_probs=35.3
Q ss_pred EEEEEEecCCEEEEEECCCC------CCCeEEeec--ccceeeEEEeCCCCCCeEEEEcCCCcEEE
Q 038533 228 YMATILMDSNKVVILDIRSP------TLPVAELER--HRACVNAIAWAPQSRRHICSVGDDSQAFI 285 (337)
Q Consensus 228 ~l~~~~~d~~~i~i~d~~~~------~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 285 (337)
.+..|+.+|..+++.-.... ...+.++.. ...+|..+.++++.. .|..++.++.++|
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~-~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQ-QLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTT-EEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCC-EEEEEECCeEEEE
Confidence 46667788874455443321 113334432 346899999999988 8999987775554
No 380
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=23.77 E-value=4.4e+02 Score=24.42 Aligned_cols=154 Identities=11% Similarity=0.061 Sum_probs=71.2
Q ss_pred CCCCeEEEecCCCCcccCcCCccEEEEeC-C-eEEEEecCCCC-ccceeeecCCCCC-c-ccCCeeEEEeecCCCCeEEE
Q 038533 70 PYPPTKLMFDPNSSSRKSSSNRHLLASSG-D-FLRLWDVGDSS-IEPVAVLNNSKSS-E-FCAPLTSFDWNEIEPKRIGT 144 (337)
Q Consensus 70 ~~~i~~i~~~~~~~~~~~~~~~~~l~~~~-~-~v~vw~~~~~~-~~~~~~~~~~~~~-~-~~~~i~~~~~~~~~~~~l~~ 144 (337)
...|.+|+++|... ..+..+. . .|...+ +.++ .+.+ ..+... . ....|.++++.|.+.+.+.+
T Consensus 14 ~g~i~~i~~~p~~~--------~~~~a~~~~ggv~rS~-DgG~tW~~~---~~~~~~~~~~~~~i~~ia~dp~~~~~i~~ 81 (789)
T 1sqj_A 14 GGYITGIVAHPKTK--------DLLYARTDIGGAYRWD-AGTSKWIPL---NDFIEAQDMNIMGTESIALDPNNPDRLYL 81 (789)
T ss_dssp CSCEEEEEECSSST--------TCEEEEESSSCEEEEE-TTTTEEEES---CTTCCGGGGGGCSEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEECCCCC--------CEEEEEecCCCEEEec-CCCCCeeEC---ccCCCcccccCCceeEEEECCCCCCEEEE
Confidence 46899999999754 2444444 3 443332 2221 2221 111000 0 01469999998854555555
Q ss_pred eeCCCc----EEEEe-CCCccchhhhhc---------cCCceeEEEeC--CCcEEEEEcCCCeEEEEECCC-CCCceeee
Q 038533 145 CSIDTT----CTIWD-IEKGVVETQLIA---------HDKEVYDICWG--EARVFASVSADGSVRIFDLRD-KEHSTIIY 207 (337)
Q Consensus 145 ~~~dg~----i~v~d-~~~~~~~~~~~~---------~~~~v~~~~~~--~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~ 207 (337)
+..+.. -.||. ...++.-..+.. ....+..++++ +.+.++.+...+.| |-... ++.=..+.
T Consensus 82 ~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl--~~S~DgG~TW~~~~ 159 (789)
T 1sqj_A 82 AQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGI--WKSSDRAKTWTNVT 159 (789)
T ss_dssp EECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCE--EEESSTTSSCEEET
T ss_pred EeCccCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCE--EEECCCCcccCCCc
Confidence 442211 23332 233331111110 01124556666 34566666644433 33322 22111111
Q ss_pred cCC---CCCCCceEEEeecCCCcEEEEEEec-CC
Q 038533 208 ESP---QPDTPLLRLAWNKQDLRYMATILMD-SN 237 (337)
Q Consensus 208 ~~~---~~~~~i~~~~~~~~~~~~l~~~~~d-~~ 237 (337)
..+ .....+..+.++|.++..++++..+ +.
T Consensus 160 ~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~ 193 (789)
T 1sqj_A 160 SIPDAFTNGIGYTSVIFDPERNGTIYASATAPQG 193 (789)
T ss_dssp TSCCCCSTTTCEEEEEECTTSTTCEEEEESSTTC
T ss_pred cCccccCCCCCeEEEEECCCCCCEEEEEEcCCCe
Confidence 111 1124578899998666677776655 44
No 381
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=22.93 E-value=3.3e+02 Score=22.65 Aligned_cols=153 Identities=9% Similarity=-0.001 Sum_probs=78.5
Q ss_pred CCeeEEEeecCCCCeEEEeeCCCcEEEEeCCCccchhh-----------------h------hccCCceeEEEeCCCcEE
Q 038533 127 APLTSFDWNEIEPKRIGTCSIDTTCTIWDIEKGVVETQ-----------------L------IAHDKEVYDICWGEARVF 183 (337)
Q Consensus 127 ~~i~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~-----------------~------~~~~~~v~~~~~~~~~~l 183 (337)
..|..++.. ....++-..+|.|+.|-....-.+-. + ......|..++......+
T Consensus 179 ~~i~~va~G---~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~v~~i~~g~~~~~ 255 (423)
T 3mvd_K 179 TVCCSIASG---ADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTF 255 (423)
T ss_dssp CCEEEEEEC---SSEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTTTTSSCEEECCTTCCCEEEEEEETTEEE
T ss_pred CcEEEEecC---CCeEEEEecCCeEEEeeCCcCCccCCCcccccccccccccccccCCeEEeecCCccEEEEEECCcEEE
Confidence 457777653 35566667899999996432111100 0 001123444444333344
Q ss_pred EEEcCCCeEEEEECCCCCCce--------eeecCCCCCCCceEEEeecCCCcEEEEEEecCCEEEEEECCCCCCC-----
Q 038533 184 ASVSADGSVRIFDLRDKEHST--------IIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTLP----- 250 (337)
Q Consensus 184 ~~~~~dg~i~iwd~~~~~~~~--------~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~~i~i~d~~~~~~~----- 250 (337)
+.-..+|.|..|-........ ...........|..++- ...+.++...++. |+.|-....+++
T Consensus 256 ~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia~---G~~ht~alt~~G~-v~~wG~n~~GqLG~g~~ 331 (423)
T 3mvd_K 256 MRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAG---GQHHTVILTTDLK-CSVVGRPEYGRLGLGDV 331 (423)
T ss_dssp EEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCCSEEEEEE---CSSEEEEEETTCC-EEEEECCGGGTTCSSSC
T ss_pred EEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCCeEEEEc---ccCeEEEEeCCCc-EEEEECCCCCCCCCCCc
Confidence 444689999999765422110 00000001235555554 4455556677887 999965432110
Q ss_pred ---e---EEeecccceeeEEEeCCCCCCeEEEEcCCCcEEEEeCC
Q 038533 251 ---V---AELERHRACVNAIAWAPQSRRHICSVGDDSQAFIWELP 289 (337)
Q Consensus 251 ---~---~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 289 (337)
. ..+..-...|..|+.... ..+.-..||.|..|-..
T Consensus 332 ~~~~~~p~~v~~l~~~v~~ia~G~~---hs~alt~~G~v~~wG~n 373 (423)
T 3mvd_K 332 KDVVEKPTIVKKLTEKIVSVGCGEV---CSYAVTIDGKLYSWGSG 373 (423)
T ss_dssp CSCEEEEEECTTCCSCEEEEEEETT---EEEEEETTSCEEEEECC
T ss_pred cccccCceEeccCCCCEEEEEcCCC---eEEEEcCCCCEEEECCC
Confidence 1 111111225666665543 34444679999999876
No 382
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=21.13 E-value=4.3e+02 Score=23.57 Aligned_cols=62 Identities=6% Similarity=0.094 Sum_probs=37.1
Q ss_pred ceeEEEeC-CCcEEEEEcC------------CCeEEEEECCCCCCceeeecCCCCCCCceEEEeecCCCcEEEEEEec
Q 038533 171 EVYDICWG-EARVFASVSA------------DGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMD 235 (337)
Q Consensus 171 ~v~~~~~~-~~~~l~~~~~------------dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d 235 (337)
....|.|+ ++.+.+.... ...+..++..+++....+ .. .....++.++|+| +++.|++.-..
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl-~~-P~~aEpnGiafSP-D~ktLfV~vQH 551 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFM-VG-PIGCEVTGISFSP-DQKTLFVGIQH 551 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEE-EC-CTTCEEEEEEECT-TSSEEEEEEES
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEE-eC-CCCccccCCEECC-CCCEEEEEEeC
Confidence 45678888 5666553321 125666676666644333 22 1235689999999 88877765443
No 383
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=20.84 E-value=1.9e+02 Score=25.44 Aligned_cols=59 Identities=12% Similarity=0.045 Sum_probs=36.6
Q ss_pred eEEEEcCCCcEEEEeCCCCCCCCCCCCCceeeeeCCCce-eEEEEccCCCceEEEEcCCcEEE
Q 038533 273 HICSVGDDSQAFIWELPLPPVAGPNGIDPMSMYSAGSEI-NQLQWSPAQPDWLAIAFSNKMQL 334 (337)
Q Consensus 273 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~d~~i~i 334 (337)
++..|+.+|.|.-.-+....... -.....+ ....+| ..|.++++...|++++..+.++|
T Consensus 402 V~FlGT~~G~l~Kv~~~~~~~~~--~~ee~~v-~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 402 IAFLGDSQGQLHRVYLGPGSDGH--PYSTQSI-QQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp EEEEEETTSEEEEEECSSSCCSC--CSEEEES-STTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCee--EEeeecc-CCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 67788899987644443111000 0011122 445678 48999999888998888877765
Done!