Your job contains 1 sequence.
>038535
MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS
PLSAPNTDGLDPDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGI
GREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISFVNVVSVN
TTKAPVLAGIIGTQFEEICMKNVSLLVQAPSVKWQCRFVSGFNGQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038535
(225 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2119156 - symbol:AT4G33440 species:3702 "Arabi... 523 2.8e-50 1
TAIR|locus:2101313 - symbol:AT3G48950 species:3702 "Arabi... 311 1.7e-40 2
TAIR|locus:2098038 - symbol:AT3G62110 species:3702 "Arabi... 388 5.7e-36 1
TAIR|locus:2202170 - symbol:AT1G19170 species:3702 "Arabi... 330 1.5e-34 2
TAIR|locus:2128524 - symbol:AT4G23820 species:3702 "Arabi... 355 1.8e-32 1
TAIR|locus:2152980 - symbol:AT5G41870 species:3702 "Arabi... 340 6.9e-31 1
TAIR|locus:504954979 - symbol:AT5G49215 species:3702 "Ara... 244 1.9e-29 2
TAIR|locus:2082787 - symbol:AT3G61490 species:3702 "Arabi... 317 2.6e-28 1
TAIR|locus:2117964 - symbol:AT4G23500 species:3702 "Arabi... 307 5.1e-27 1
TAIR|locus:2078531 - symbol:AT3G42950 species:3702 "Arabi... 303 1.3e-26 1
TAIR|locus:2061396 - symbol:AT2G23900 species:3702 "Arabi... 302 1.5e-26 1
TAIR|locus:2086740 - symbol:AT3G16850 species:3702 "Arabi... 251 6.4e-21 1
TAIR|locus:2083383 - symbol:AT3G06770 species:3702 "Arabi... 231 9.7e-19 1
TAIR|locus:2127836 - symbol:AT4G32380 species:3702 "Arabi... 129 4.2e-06 1
TAIR|locus:504955462 - symbol:AT4G32375 species:3702 "Ara... 118 0.00015 1
TAIR|locus:2167185 - symbol:AT5G17200 species:3702 "Arabi... 117 0.00015 1
TAIR|locus:2093212 - symbol:AT3G15720 species:3702 "Arabi... 113 0.00050 1
>TAIR|locus:2119156 [details] [associations]
symbol:AT4G33440 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005576 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0005975 CAZy:GH28 eggNOG:COG5434
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:BT002785 EMBL:BT004354 IPI:IPI00528054
RefSeq:NP_195070.2 UniGene:At.43591 ProteinModelPortal:Q84K13
PaxDb:Q84K13 PRIDE:Q84K13 EnsemblPlants:AT4G33440.1 GeneID:829481
KEGG:ath:AT4G33440 TAIR:At4g33440 InParanoid:Q84K13 OMA:TRGHLIE
PhylomeDB:Q84K13 ProtClustDB:CLSN2690354 Genevestigator:Q84K13
Uniprot:Q84K13
Length = 475
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 111/195 (56%), Positives = 132/195 (67%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
M W+LWWN TL HTRGHL+EL NS NILI SNLT NSP TIHPVYC N ++ MT+L+
Sbjct: 193 MWWELWWNRTLVHTRGHLIELKNSHNILI-SNLTLLNSPFWTIHPVYCSNVVIRNMTILA 251
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P++APNTDG+DPD CYIESG+ LVAVKSGWD G+A+ARPSSNI +RR+SGT
Sbjct: 252 PMNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGMAVARPSSNIVIRRISGT 311
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKISGI 171
T TCSGVGIG EMSG IFN+TV + VW G LR+ G IS I
Sbjct: 312 TRTCSGVGIGSEMSGGIFNITVEDIHVWDSAAG-----LRIKTDKGRGG------YISNI 360
Query: 172 SFVNVVSVNTTKAPV 186
+F NV+ + K P+
Sbjct: 361 TFNNVL-LEKVKVPI 374
Score = 200 (75.5 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 33/68 (48%), Positives = 51/68 (75%)
Query: 155 HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLVQAPSVKW 214
H + WDPKA+P++ GI NVVS+N+ KAP+L G+ GT F+++C++NV+LL + KW
Sbjct: 383 HSDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSFQDVCLRNVTLLGLPKTEKW 442
Query: 215 QCRFVSGF 222
+C+ VSG+
Sbjct: 443 KCKDVSGY 450
Score = 40 (19.1 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 117 GVGIGREMSGRIFNVTVNHLDVWMQQQGS 145
GVG G+ + F V HL+ + + G+
Sbjct: 79 GVGDGKTSNTAAFRRAVRHLEGFAAEGGA 107
>TAIR|locus:2101313 [details] [associations]
symbol:AT3G48950 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005576 EMBL:AL132967 GO:GO:0005975
CAZy:GH28 eggNOG:COG5434 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 HOGENOM:HOG000238076
ProtClustDB:CLSN2684221 EMBL:DQ056615 IPI:IPI00541492 PIR:T46135
RefSeq:NP_190464.1 UniGene:At.53842 ProteinModelPortal:Q9SMT3
SMR:Q9SMT3 PaxDb:Q9SMT3 PRIDE:Q9SMT3 EnsemblPlants:AT3G48950.1
GeneID:824056 KEGG:ath:AT3G48950 TAIR:At3g48950 InParanoid:Q9SMT3
OMA:ARRITMK PhylomeDB:Q9SMT3 Genevestigator:Q9SMT3 Uniprot:Q9SMT3
Length = 469
Score = 311 (114.5 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 63/140 (45%), Positives = 90/140 (64%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + K TR +L+E++ S NI I SN+T +SPS IHPVYC + VK +TVL+P+
Sbjct: 169 WDKFKKKQFKITRPYLIEILFSKNIQI-SNITLIDSPSWNIHPVYCNSVIVKSVTVLAPV 227
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+ PNTDG++PD CYI SG+ +AVKSGWD GI P+ +++RR++ +P
Sbjct: 228 TVPNTDGINPDSCTNTLIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTQQLSIRRLTCISP 287
Query: 114 TCSGVGIGREMSGRIFNVTV 133
+GV +G EMSG I +V +
Sbjct: 288 KSAGVALGSEMSGGIKDVRI 307
Score = 139 (54.0 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 29/72 (40%), Positives = 45/72 (62%)
Query: 153 YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS--LLVQA 209
YG HP EG+DPKA+P+I+ I++ ++ + N T + L GI F IC+ NV+ L +A
Sbjct: 354 YGSHPDEGFDPKALPEITNINYRDMTAENVTMSASLDGIDKDPFTGICISNVTIALAAKA 413
Query: 210 PSVKWQCRFVSG 221
++W C V+G
Sbjct: 414 KKMQWNCTDVAG 425
>TAIR|locus:2098038 [details] [associations]
symbol:AT3G62110 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] InterPro:IPR000743 Pfam:PF00295
GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005576
GO:GO:0005975 CAZy:GH28 eggNOG:COG5434 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:AF324992 EMBL:BT000724 IPI:IPI00542616
RefSeq:NP_567126.1 UniGene:At.19142 ProteinModelPortal:Q9FPJ2
SMR:Q9FPJ2 PaxDb:Q9FPJ2 PRIDE:Q9FPJ2 EnsemblPlants:AT3G62110.1
GeneID:825384 KEGG:ath:AT3G62110 TAIR:At3g62110 InParanoid:Q9FPJ2
OMA:YGEHPDE PhylomeDB:Q9FPJ2 ProtClustDB:CLSN2689318
ArrayExpress:Q9FPJ2 Genevestigator:Q9FPJ2 Uniprot:Q9FPJ2
Length = 471
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 78/151 (51%), Positives = 102/151 (67%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + N L +TR HLVELMNS+ LIISNLTF NSP IHPVYCR+ VK +T+L+PL
Sbjct: 166 WDWFRNGELNYTRPHLVELMNSTG-LIISNLTFLNSPFWNIHPVYCRDVVVKNLTILAPL 224
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DPD CYI +G+ LV++KSGWD GI+ ARPSS I + R++G T
Sbjct: 225 ESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINRLTGQTT 284
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG 144
+ SG+ IG EMSG + + + L ++ G
Sbjct: 285 SSSGIAIGSEMSGGVSEIYIKDLHLFNSNTG 315
Score = 142 (55.0 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 40/112 (35%), Positives = 59/112 (52%)
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISF 173
T +G G G + I NV ++++ ++ G Y + HP E +DPKA+P I I+F
Sbjct: 320 TSAGRG-GYVRNVHILNVKLDNVKKAIRFTGKYGE------HPDEKYDPKALPAIEKITF 372
Query: 174 VNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLVQAPSVK--WQCRFVSGFN 223
NV A +L GI G F+ IC NV+L V+ S K W+C V G++
Sbjct: 373 ENVNGDGIGVAGLLEGIEGDVFKNICFLNVTLRVKKNSKKSPWECSNVRGYS 424
>TAIR|locus:2202170 [details] [associations]
symbol:AT1G19170 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002684 GO:GO:0005576
GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0016829 IPI:IPI00527248 RefSeq:NP_173351.1 UniGene:At.41758
ProteinModelPortal:F4IE17 SMR:F4IE17 PRIDE:F4IE17
EnsemblPlants:AT1G19170.1 GeneID:838500 KEGG:ath:AT1G19170
OMA:GHYLRPS Uniprot:F4IE17
Length = 506
Score = 330 (121.2 bits), Expect = 1.5e-34, Sum P(2) = 1.5e-34
Identities = 68/153 (44%), Positives = 100/153 (65%)
Query: 6 WWNS----TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
WW L +TRG LV++M SS+I +I+N+T +SP T+HP C+N ++ +T+L+P
Sbjct: 210 WWKKHQRRLLNYTRGPLVQIMWSSDI-VIANITMRDSPFWTLHPYDCKNVTIRNVTILAP 268
Query: 62 LS-APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
++ APNTDG+DPD CYI +G+ +A+KSGWD GIA RPS+NI +R +
Sbjct: 269 VTGAPNTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVR 328
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG 144
+ +GV IG EMSG I NVT+ +L +W ++G
Sbjct: 329 SVISAGVSIGSEMSGGISNVTIENLLIWNSRRG 361
Score = 65 (27.9 bits), Expect = 1.5e-34, Sum P(2) = 1.5e-34
Identities = 23/94 (24%), Positives = 43/94 (45%)
Query: 130 NVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPV-LA 188
N+T++++ V + + Y + H + +D KA P +SG SF + + PV +
Sbjct: 381 NLTLDNVRVGIVIKTDYNE------HADDNYDRKAYPILSGFSFAGIHGQGV-RVPVRIH 433
Query: 189 GIIGTQFEEICMKNVSL-LVQAPSVKWQCRFVSG 221
G + +++S+ L +QC FV G
Sbjct: 434 GSEQIPVRNVTFRDMSVGLTYKKKHIFQCSFVKG 467
>TAIR|locus:2128524 [details] [associations]
symbol:AT4G23820 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005576 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0005975 CAZy:GH28 eggNOG:COG5434
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:AL161560 EMBL:AL035394 HOGENOM:HOG000238076
ProtClustDB:CLSN2686003 EMBL:AY062697 EMBL:AY128793 IPI:IPI00542449
PIR:T05614 RefSeq:NP_194113.1 UniGene:At.22227 UniGene:At.67753
ProteinModelPortal:Q9SUP5 PaxDb:Q9SUP5 PRIDE:Q9SUP5
EnsemblPlants:AT4G23820.1 GeneID:828482 KEGG:ath:AT4G23820
TAIR:At4g23820 InParanoid:Q9SUP5 OMA:PCTELTS PhylomeDB:Q9SUP5
Genevestigator:Q9SUP5 Uniprot:Q9SUP5
Length = 444
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 71/143 (49%), Positives = 97/143 (67%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W++W + TLK+TR +L+E +S I IISN+ F NSP IHPVYC N + +T+L+P
Sbjct: 164 WNMWRSRTLKYTRPNLIEFKDSKEI-IISNVIFQNSPFWNIHPVYCSNVVIHHVTILAPQ 222
Query: 63 SAPNTDGLDPD-----C----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DPD C YI +G+ LVA+KSGWD GIA RPSSNI +RR++G++P
Sbjct: 223 DSPNTDGIDPDSSYNVCIEDSYISTGDDLVAIKSGWDQYGIAYGRPSSNITIRRITGSSP 282
Query: 114 TCSGVGIGREMSGRIFNVTVNHL 136
+G+ IG E SG I N+ H+
Sbjct: 283 F-AGIAIGSETSGGIKNIIAEHI 304
Score = 137 (53.3 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 42/140 (30%), Positives = 70/140 (50%)
Query: 93 GIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS---GR---IFNVTVNHLDVWMQQQGSY 146
GIA+ +S ++ + T S +G+G + GR I N+ ++ DV++ +
Sbjct: 285 GIAIGSETSG-GIKNIIAEHITLSNMGVGVNIKTNIGRGGYIKNIKIS--DVYVD---TA 338
Query: 147 KDRLRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN 202
K +++ G HP E ++P A+P + GI NV VN A + G+ G+ F IC+
Sbjct: 339 KYGIKIAGDTGDHPDENYNPNALPVVKGIHIKNVWGVNVRNAGSIQGLKGSPFTGICLSE 398
Query: 203 VSLLVQAPSVK-WQCRFVSG 221
++L S K W+C VSG
Sbjct: 399 INLHGSLNSYKTWKCSDVSG 418
>TAIR|locus:2152980 [details] [associations]
symbol:AT5G41870 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:AB016871 HSSP:P26509 HOGENOM:HOG000238076 EMBL:BT015129
IPI:IPI00540800 RefSeq:NP_199002.1 UniGene:At.27978
UniGene:At.43191 ProteinModelPortal:Q9FJ27 SMR:Q9FJ27 PaxDb:Q9FJ27
PRIDE:Q9FJ27 EnsemblPlants:AT5G41870.1 GeneID:834192
KEGG:ath:AT5G41870 TAIR:At5g41870 InParanoid:Q9FJ27 OMA:PCAELAT
PhylomeDB:Q9FJ27 ProtClustDB:CLSN2686003 Genevestigator:Q9FJ27
Uniprot:Q9FJ27
Length = 449
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 71/146 (48%), Positives = 99/146 (67%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W++W + TLK TR L+E NS+NIL+ S++ NSP T+HPVYC N V +T+L+P
Sbjct: 169 WNMWRHGTLKFTRPGLIEFNNSTNILV-SHVVLQNSPFWTLHPVYCSNVVVHHVTILAPT 227
Query: 63 SAPNTDGLDPD-----C----YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+ NTDG+DPD C YI +G+ LVAVKSGWD GIA RPS +I +RR++G++P
Sbjct: 228 DSYNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYNRPSRDITIRRITGSSP 287
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVW 139
+G+ IG E SG I NVTV ++ ++
Sbjct: 288 F-AGIAIGSETSGGIQNVTVENITLY 312
>TAIR|locus:504954979 [details] [associations]
symbol:AT5G49215 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:AY090997 EMBL:AY133817 IPI:IPI00524996
RefSeq:NP_680409.1 UniGene:At.44190 ProteinModelPortal:Q8RX04
PaxDb:Q8RX04 PRIDE:Q8RX04 EnsemblPlants:AT5G49215.1 GeneID:834981
KEGG:ath:AT5G49215 TAIR:At5g49215 InParanoid:Q8RX04 OMA:FLANGSF
PhylomeDB:Q8RX04 ProtClustDB:CLSN2690230 Genevestigator:Q8RX04
Uniprot:Q8RX04
Length = 449
Score = 244 (91.0 bits), Expect = 1.9e-29, Sum P(2) = 1.9e-29
Identities = 55/141 (39%), Positives = 87/141 (61%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + + +L+++R HLVE +++ N+ I+SNLTF N+P+ TIH VYCRN ++ +T +
Sbjct: 166 WDRFNSHSLEYSRPHLVEFVSAENV-IVSNLTFLNAPAYTIHSVYCRNLYIHRVTANTCP 224
Query: 63 SAPNTDGLDPD-----CYIES----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+P T G+ PD C ES G +++KSG D G++ ARP++N+ +R V
Sbjct: 225 ESPYTIGIVPDSSENVCIQESSINMGYDAISLKSGCDEYGLSYARPTANVQIRNVYLRAA 284
Query: 114 TCSGVGIGREMSGRIFNVTVN 134
+ S + G EMSG I +V V+
Sbjct: 285 SGSSISFGSEMSGGISDVEVS 305
Score = 108 (43.1 bits), Expect = 1.9e-29, Sum P(2) = 1.9e-29
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 155 HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLVQ---APS 211
HP G+D A P +S I ++V N + A G + F I + N+SL ++ +P+
Sbjct: 354 HPDSGFDENAYPLVSHIRLHDIVGENISTAGYFFGTKESPFTSILLSNISLSIKNSASPA 413
Query: 212 VKWQCRFVSG 221
WQC +V G
Sbjct: 414 DSWQCSYVDG 423
>TAIR|locus:2082787 [details] [associations]
symbol:AT3G61490 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005576 EMBL:AL132962 GO:GO:0005975
CAZy:GH28 eggNOG:COG5434 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 HOGENOM:HOG000238076 IPI:IPI00527942
PIR:T47941 RefSeq:NP_001190154.1 RefSeq:NP_191708.1
RefSeq:NP_974473.1 UniGene:At.43625 ProteinModelPortal:Q9M318
SMR:Q9M318 PaxDb:Q9M318 PRIDE:Q9M318 EnsemblPlants:AT3G61490.1
EnsemblPlants:AT3G61490.2 EnsemblPlants:AT3G61490.3 GeneID:825322
KEGG:ath:AT3G61490 TAIR:At3g61490 InParanoid:Q9M318 OMA:GKLKYTR
PhylomeDB:Q9M318 ProtClustDB:CLSN2915754 Genevestigator:Q9M318
Uniprot:Q9M318
Length = 476
Score = 317 (116.6 bits), Expect = 2.6e-28, P = 2.6e-28
Identities = 64/151 (42%), Positives = 94/151 (62%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + LK+TR +L+ELM S I I SNLTF +SPS IHPVY N VKG+T+++P+
Sbjct: 168 WQKFHGGKLKYTRPYLIELMFSDTIQI-SNLTFLDSPSWNIHPVYSSNIIVKGVTIIAPV 226
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG++PD CYI SG+ +AVKSGWD GI+ P+ ++ +RR++ +P
Sbjct: 227 KSPNTDGINPDSCTNTRIEDCYIISGDDCIAVKSGWDEYGISFGMPTKHLVIRRLTCISP 286
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG 144
+ + +G EMSG I +V + + + G
Sbjct: 287 YSAAIALGSEMSGGIEDVRAEDITAYQTESG 317
Score = 124 (48.7 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 41/133 (30%), Positives = 62/133 (46%)
Query: 93 GIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVN-HLDVWM-QQQGSYKDRL 150
GI R A + SG + VG G + I+ +N H W+ G+YK
Sbjct: 300 GIEDVRAEDITAYQTESGVRIK-TAVGRGAFVKN-IYVKGMNLHTMKWVFWMTGNYK--- 354
Query: 151 RLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLVQAP 210
H +DP A+P+I+GI++ ++V+ N + A L GI G F IC+ N ++ + A
Sbjct: 355 ---AHADSHYDPHALPEITGINYRDIVAENVSMAGRLEGISGDPFTGICISNATISMAAK 411
Query: 211 SVK--WQCRFVSG 221
K W C V G
Sbjct: 412 HKKAIWMCSDVEG 424
>TAIR|locus:2117964 [details] [associations]
symbol:AT4G23500 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0005618
"cell wall" evidence=IDA] InterPro:IPR000743 Pfam:PF00295
GO:GO:0005618 GO:GO:0005576 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0005975 CAZy:GH28 eggNOG:COG5434 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AL031326
EMBL:AL161559 EMBL:AY142497 EMBL:AK221568 IPI:IPI00537164
PIR:T05388 RefSeq:NP_194081.1 UniGene:At.32423
ProteinModelPortal:O81746 SMR:O81746 PaxDb:O81746 PRIDE:O81746
EnsemblPlants:AT4G23500.1 GeneID:828450 KEGG:ath:AT4G23500
TAIR:At4g23500 HOGENOM:HOG000238076 InParanoid:O81746 OMA:YGRGRDT
PhylomeDB:O81746 ProtClustDB:CLSN2916139 Genevestigator:O81746
Uniprot:O81746
Length = 495
Score = 307 (113.1 bits), Expect = 5.1e-27, P = 5.1e-27
Identities = 63/139 (45%), Positives = 90/139 (64%)
Query: 6 WWNS----TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
WW LK+TR +L+E+M+S I I SNLTF NSPS IHPVY N +++G+T+L+P
Sbjct: 190 WWGKFKRGELKYTRPYLIEIMHSDGIQI-SNLTFLNSPSWHIHPVYSSNIYIQGLTILAP 248
Query: 62 LSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
++ PNTDG++PD CYI SG+ +AVKSGWD GI P+ + +RR++ +
Sbjct: 249 VTVPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGINYGMPTKQLLIRRLTCIS 308
Query: 113 PTCSGVGIGREMSGRIFNV 131
P + + +G EMSG I +V
Sbjct: 309 PDSAVIALGSEMSGGIEDV 327
Score = 153 (58.9 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 48/150 (32%), Positives = 71/150 (47%)
Query: 76 IESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT-PTCSGVGIGREMSGRIFNVTVN 134
I + ++A+ S GI R +A+ SG T G G G + +T+
Sbjct: 307 ISPDSAVIALGSEMS-GGIEDVRAEDIVAINSESGIRIKTAIGRG-GYVKDVYVRGMTMM 364
Query: 135 HLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQ 194
+ GSY HP + +DPKA+P I I++ ++V+ N T LAGI G Q
Sbjct: 365 TMKYVFWMTGSYGS------HPDDHYDPKALPVIQNINYQDMVAENVTMPAQLAGISGDQ 418
Query: 195 FEEICMKNVSL-LVQAPS-VKWQCRFVSGF 222
F IC+ NV++ L + P V W C VSG+
Sbjct: 419 FTGICISNVTITLSKKPKKVLWNCTDVSGY 448
>TAIR|locus:2078531 [details] [associations]
symbol:AT3G42950 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] InterPro:IPR000743
Pfam:PF00295 EMBL:CP002686 GO:GO:0005576 GO:GO:0005975 CAZy:GH28
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0016829 EMBL:AL138654 EMBL:AY050383 IPI:IPI00517878
PIR:T47353 RefSeq:NP_189881.1 UniGene:At.1332
ProteinModelPortal:Q9M1L0 SMR:Q9M1L0 PRIDE:Q9M1L0
EnsemblPlants:AT3G42950.1 GeneID:823351 KEGG:ath:AT3G42950
TAIR:At3g42950 InParanoid:Q9M1L0 OMA:QNIRITN PhylomeDB:Q9M1L0
ProtClustDB:CLSN2682441 Genevestigator:Q9M1L0 Uniprot:Q9M1L0
Length = 484
Score = 303 (111.7 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 63/153 (41%), Positives = 93/153 (60%)
Query: 6 WWNS----TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
WW L HTRG LV++M SS+I + +N+T +SP T+HP C+N + MT+L+P
Sbjct: 188 WWKKYRQKLLNHTRGPLVQIMWSSDI-VFANITLRDSPFWTLHPYDCKNVTITNMTILAP 246
Query: 62 L-SAPNTDGLDPD-C--------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
+ APNTDG+DPD C YI G+ +A+KSGWD G +PS NI +R +
Sbjct: 247 VFEAPNTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILIRNLIIR 306
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG 144
+ +G+ IG EMSG + N+TV ++ +W ++G
Sbjct: 307 SMVSAGISIGSEMSGGVSNITVENILIWSSRRG 339
>TAIR|locus:2061396 [details] [associations]
symbol:AT2G23900 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005576 EMBL:CP002685
GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0016829 EMBL:DQ446556 IPI:IPI00539911 RefSeq:NP_179968.2
UniGene:At.50092 ProteinModelPortal:Q1PF10 SMR:Q1PF10 PRIDE:Q1PF10
EnsemblPlants:AT2G23900.1 GeneID:816922 KEGG:ath:AT2G23900
TAIR:At2g23900 InParanoid:Q1PF10 OMA:NDGCDPE PhylomeDB:Q1PF10
ProtClustDB:CLSN2684221 Genevestigator:Q1PF10 Uniprot:Q1PF10
Length = 477
Score = 302 (111.4 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 58/143 (40%), Positives = 94/143 (65%)
Query: 14 TRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD 73
TR + +E++ S N+ I SN+T +SP+ IHPVYC N VKG+T+L+P+ +PNTDG++PD
Sbjct: 191 TRPYTIEIIFSQNVQI-SNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPD 249
Query: 74 ---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREM 124
CY+ SG+ +AVKSGWD GI + P+ +++RR++ +P +G+ +G EM
Sbjct: 250 SCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSEM 309
Query: 125 SGRIFNVTVNHLDVWMQQQGSYK 147
SG I +V + + + +Q Q + +
Sbjct: 310 SGGIKDVRIEDITL-LQTQSAIR 331
Score = 130 (50.8 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 32/109 (29%), Positives = 53/109 (48%)
Query: 119 GIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISFVNVVS 178
G +++ R F + WM G+Y HP G+DPKA+P I+ I++ ++ +
Sbjct: 340 GYVKDIFARRFTMKTMKYVFWMS--GAYNQ------HPASGFDPKAMPVITNINYRDMTA 391
Query: 179 VNTTKAPVLAGIIGTQFEEICMKNVSLLVQAPSVK--WQCRFVSGFNGQ 225
N T+ L G F +ICM N+ + + A K W C +SG + +
Sbjct: 392 DNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLWNCTSISGVSSK 440
>TAIR|locus:2086740 [details] [associations]
symbol:AT3G16850 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0009505 "plant-type cell wall"
evidence=IDA] [GO:0006816 "calcium ion transport" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009637
"response to blue light" evidence=RCA] [GO:0009651 "response to
salt stress" evidence=RCA] [GO:0010155 "regulation of proton
transport" evidence=RCA] [GO:0046777 "protein autophosphorylation"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005773 EMBL:CP002686
GO:GO:0005576 GO:GO:0005975 GO:GO:0009505 CAZy:GH28 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:AY035074 EMBL:AY113876 IPI:IPI00537813
RefSeq:NP_188308.1 UniGene:At.22797 ProteinModelPortal:Q94C86
STRING:Q94C86 PRIDE:Q94C86 EnsemblPlants:AT3G16850.1 GeneID:820938
KEGG:ath:AT3G16850 TAIR:At3g16850 InParanoid:Q94C86 OMA:CIEDSTI
PhylomeDB:Q94C86 ProtClustDB:CLSN2913450 ArrayExpress:Q94C86
Genevestigator:Q94C86 Uniprot:Q94C86
Length = 455
Score = 251 (93.4 bits), Expect = 6.4e-21, P = 6.4e-21
Identities = 53/146 (36%), Positives = 89/146 (60%)
Query: 6 WW----NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
WW + +L ++R H++E ++S +ILI SNLTF N+P+ IHPVYC ++ + + +
Sbjct: 162 WWEWLESGSLNYSRPHIIEFVSSKHILI-SNLTFLNAPAINIHPVYCSQIHIRKVLIETS 220
Query: 62 LSAPNTDGLDPD-----CYIES----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
+ +P+ G+ PD C +S G+ V++KSGWD GI RP++ + +R + +
Sbjct: 221 VDSPHVLGVAPDSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRNLRLKS 280
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDV 138
PT +G+ G EMSG + +VTV L++
Sbjct: 281 PTGAGISFGSEMSGGVSDVTVERLNI 306
>TAIR|locus:2083383 [details] [associations]
symbol:AT3G06770 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005634
"nucleus" evidence=ISM] [GO:0005975 "carbohydrate metabolic
process" evidence=IEA;ISS] InterPro:IPR000743 Pfam:PF00295
EMBL:CP002686 GO:GO:0005576 GO:GO:0005975 CAZy:GH28 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:AY093030 EMBL:AY128935 IPI:IPI00522825
RefSeq:NP_850525.1 UniGene:At.26688 ProteinModelPortal:Q8RWK6
SMR:Q8RWK6 STRING:Q8RWK6 PRIDE:Q8RWK6 EnsemblPlants:AT3G06770.2
GeneID:819862 KEGG:ath:AT3G06770 TAIR:At3g06770 InParanoid:Q8RWK6
OMA:TENVHIR PhylomeDB:Q8RWK6 ProtClustDB:CLSN2688125
ArrayExpress:Q8RWK6 Genevestigator:Q8RWK6 Uniprot:Q8RWK6
Length = 446
Score = 231 (86.4 bits), Expect = 9.7e-19, P = 9.7e-19
Identities = 55/166 (33%), Positives = 92/166 (55%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + + +LK+ R HL+E ++S N+ I+SNLTF N+P+ +I+ +Y + ++ + S
Sbjct: 166 WDRFTSHSLKYNRPHLIEFLSSENV-IVSNLTFLNAPAYSIYSIYSSHVYIHKILAHSSP 224
Query: 63 SAPNTDGLDPD-----CY----IESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+P T G+ PD C I G +++KSGWD GIA +RP+ N+ +R V
Sbjct: 225 KSPYTIGIVPDSSDYVCIQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGA 284
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG-SYKDRLRLYGHPKE 158
+ S + G EMSG I +V V++ + G +++ G+ KE
Sbjct: 285 SGSSISFGSEMSGGISDVVVDNAHIHYSLTGIAFRTTKGRGGYIKE 330
Score = 111 (44.1 bits), Expect = 0.00083, P = 0.00083
Identities = 31/98 (31%), Positives = 50/98 (51%)
Query: 126 GRIFNVTVNHLDVWMQQQGSYKDRLRLYG-HPKEGWDPKAIPKISGISFVNVVSVNTTKA 184
G I + ++++D M + G+ +G HP + +D A+P +S I N+ N A
Sbjct: 326 GYIKEIDISNID--MLRIGTAIVANGSFGSHPDDKYDVNALPLVSHIRLSNISGENIGIA 383
Query: 185 PVLAGIIGTQFEEICMKNVSLLVQA-PSVKWQCRFVSG 221
L GI + F + + NVSL + + SV WQC +V G
Sbjct: 384 GKLFGIKESPFSSVTLSNVSLSMSSGSSVSWQCSYVYG 421
>TAIR|locus:2127836 [details] [associations]
symbol:AT4G32380 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005576 EMBL:CP002687
GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
IPI:IPI00542951 RefSeq:NP_194964.2 UniGene:At.50389
ProteinModelPortal:F4JUA6 SMR:F4JUA6 EnsemblPlants:AT4G32380.1
GeneID:829373 KEGG:ath:AT4G32380 OMA:INANFPI Uniprot:F4JUA6
Length = 354
Score = 129 (50.5 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 46/145 (31%), Positives = 69/145 (47%)
Query: 6 WWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAP 65
WW+S +R V NIL + LT NSP I + N + + +++P S+P
Sbjct: 37 WWSSVALQSRPVAVRFFGCQNILY-NGLTQINSPRNHITILDSNNATLSNLHLIAPASSP 95
Query: 66 NTDGLDPDCYIESGNGLVA-VKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREM 124
NTDG+D + ++ N + + +K+G D D +A+ R S NI V V T G+ IG
Sbjct: 96 NTDGIDIS-HSQNINIMSSTIKTG-D-DCVAIKRNSYNINVTYV--TCGPGHGISIGSLG 150
Query: 125 SGR----IFNVTVNHLDVWMQQQGS 145
G + NV V H Q G+
Sbjct: 151 EGGASEVVQNVNVRHCTFTGTQNGA 175
>TAIR|locus:504955462 [details] [associations]
symbol:AT4G32375 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA;ISS] InterPro:IPR000743
Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576 EMBL:CP002687
GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
IPI:IPI00531203 RefSeq:NP_680757.1 UniGene:At.54578
ProteinModelPortal:F4JUA4 SMR:F4JUA4 PRIDE:F4JUA4
EnsemblPlants:AT4G32375.1 GeneID:829372 KEGG:ath:AT4G32375
OMA:KPPTMFP Uniprot:F4JUA4
Length = 486
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 41/137 (29%), Positives = 65/137 (47%)
Query: 4 DLWWNSTLKHT-RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
+ WW+S ++H+ R + SSNIL + LT NSP I + C N + +++P
Sbjct: 96 EAWWSS-IEHSHRPRTIGFSGSSNILY-NGLTQMNSPKNHISILDCTNVTLSNFHLIAPK 153
Query: 63 SAPNTDGLDPDCYIESGNGLVAVKSGWD--HDGIAMARPSSNIAVRRVS-GTTPTCSGVG 119
+PNTDG+D I N + S D IA+ S +I + V+ G S
Sbjct: 154 DSPNTDGID----IAHSNNIRIFNSSIQTGDDCIAINGGSYDINITHVACGPGHGISIGS 209
Query: 120 IGR-EMSGRIFNVTVNH 135
+GR ++ + NV + H
Sbjct: 210 LGRYSVNDTVQNVKIRH 226
>TAIR|locus:2167185 [details] [associations]
symbol:AT5G17200 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 KO:K01184 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AB005238
HSSP:P26214 IPI:IPI00532874 RefSeq:NP_197222.1 UniGene:At.54880
ProteinModelPortal:Q9FFI9 SMR:Q9FFI9 STRING:Q9FFI9
EnsemblPlants:AT5G17200.1 GeneID:831584 KEGG:ath:AT5G17200
TAIR:At5g17200 InParanoid:Q9FFI9 OMA:GSSHINI PhylomeDB:Q9FFI9
ProtClustDB:CLSN2914874 Genevestigator:Q9FFI9 Uniprot:Q9FFI9
Length = 421
Score = 117 (46.2 bits), Expect = 0.00015, P = 0.00015
Identities = 46/155 (29%), Positives = 67/155 (43%)
Query: 2 RWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
R LWW + + R + N+ N L ISNL NSP + +N V+G+ + +P
Sbjct: 141 RGSLWWGNV--NNRPCAMHF-NNCNGLRISNLRHLNSPRNHVGLSCSQNIEVRGLRMTAP 197
Query: 62 LSAPNTDGLD---------PDCYIESGNGLVAVKSGWDHDGIA--MARPSSNIAVRRVSG 110
+PNTDG+D D I +G+ +A+ SG H I P I+V + G
Sbjct: 198 GDSPNTDGIDISNCIGVHIHDSVIATGDDCIAINSGSSHINITGIFCGPGHGISVGSL-G 256
Query: 111 TTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGS 145
T V R + F T N + + Q GS
Sbjct: 257 VTGDFETVEEVR-VKNCTFTKTQNGVRIKTYQNGS 290
>TAIR|locus:2093212 [details] [associations]
symbol:AT3G15720 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0031225
"anchored to membrane" evidence=TAS] [GO:0046658 "anchored to
plasma membrane" evidence=IDA] [GO:0009505 "plant-type cell wall"
evidence=IDA] InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005576 GO:GO:0005975
GO:GO:0009505 CAZy:GH28 eggNOG:COG5434 HOGENOM:HOG000237792
KO:K01184 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:AB017071 GO:GO:0046658 IPI:IPI00519614 RefSeq:NP_566524.1
UniGene:At.39003 HSSP:O74213 ProteinModelPortal:Q9LW07 SMR:Q9LW07
STRING:Q9LW07 EnsemblPlants:AT3G15720.1 GeneID:820815
KEGG:ath:AT3G15720 GeneFarm:340 TAIR:At3g15720 InParanoid:Q9LW07
OMA:SLRINAP PhylomeDB:Q9LW07 ProtClustDB:PLN03003
Genevestigator:Q9LW07 GermOnline:AT3G15720 Uniprot:Q9LW07
Length = 456
Score = 113 (44.8 bits), Expect = 0.00050, P = 0.00050
Identities = 37/127 (29%), Positives = 58/127 (45%)
Query: 6 WWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAP 65
WW K +R ++ + +N L +S LT +SP IH C + + + +P S+P
Sbjct: 130 WWEH--KGSRPTALKFRSCNN-LRLSGLTHLDSPMAHIHISECNYVTISSLRINAPESSP 186
Query: 66 NTDGLD---------PDCYIESGNGLVAVKSGWDH---DGIAMARPSSNIAVRRVS--GT 111
NTDG+D DC I +G+ +A+ SG + GI P I++ + G
Sbjct: 187 NTDGIDVGASSNVVIQDCIIATGDDCIAINSGTSNIHISGIDCG-PGHGISIGSLGKDGE 245
Query: 112 TPTCSGV 118
T T V
Sbjct: 246 TATVENV 252
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.433 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 225 225 0.00077 113 3 11 22 0.39 33
32 0.41 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 621 (66 KB)
Total size of DFA: 208 KB (2115 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.57u 0.12s 18.69t Elapsed: 00:00:00
Total cpu time: 18.58u 0.12s 18.70t Elapsed: 00:00:00
Start: Sat May 11 11:21:40 2013 End: Sat May 11 11:21:40 2013