BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038535
(225 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224096000|ref|XP_002310517.1| predicted protein [Populus trichocarpa]
gi|222853420|gb|EEE90967.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 153/259 (59%), Positives = 175/259 (67%), Gaps = 38/259 (14%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
M W+LWWN TL+HTRGHLVELMNS+NILI +NLTFCN+P TIHPVYC N VK MT+L+
Sbjct: 156 MWWELWWNRTLEHTRGHLVELMNSNNILI-ANLTFCNAPFWTIHPVYCSNVVVKDMTILA 214
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
PL APNTDG+DPD CYIESG+ LVAVKSGWD GI MARPSSNI VRRVSGT
Sbjct: 215 PLKAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKMARPSSNIVVRRVSGT 274
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSY----------KDRLR 151
TPTCSGVGIG EMSG IFN+T+ L VW +G Y +R++
Sbjct: 275 TPTCSGVGIGSEMSGGIFNITIEDLHVWDSAAGVRIKTDNGRGGYIANITISNVTMERVK 334
Query: 152 L--------YGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
+ HP EGWDPKA+P + GIS NV+S N+TKAPVL G+ F ICMKNV
Sbjct: 335 VPIRFSRGSNDHPDEGWDPKAVPVVKGISIRNVISFNSTKAPVLEGVEDAPFGGICMKNV 394
Query: 204 SLLVQAPSVKWQCRFVSGF 222
SLL S+ W C FVSGF
Sbjct: 395 SLLGVVSSLSWHCEFVSGF 413
>gi|296088539|emb|CBI37530.3| unnamed protein product [Vitis vinifera]
Length = 528
Score = 282 bits (722), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 151/259 (58%), Positives = 179/259 (69%), Gaps = 38/259 (14%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
M W+LWWN TL+HTRGHL+E+ NS NILI SNLTF NSP TIHPVYC N +K +T+L+
Sbjct: 198 MWWELWWNRTLEHTRGHLLEIKNSHNILI-SNLTFMNSPFWTIHPVYCSNVVIKDVTILA 256
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
PL+APNTDG+DPD CYIESG+ LVAVKSGWD GIAMARPSSNI VRR+SGT
Sbjct: 257 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSSNIIVRRLSGT 316
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVW----------MQQQGSY----------KDRLR 151
TPTCSGVGIG EMSG I NVT+ L +W + +G Y +R++
Sbjct: 317 TPTCSGVGIGSEMSGGISNVTMEDLHIWDSAAGVRIKTDKGRGGYVVNITINNIRMERVK 376
Query: 152 L--------YGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
+ HP +GWDPKA+PKI GI NVVS+N+TKAP+L GI G +E ICMKNV
Sbjct: 377 VPIRFSRGSNDHPDDGWDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGAPYEGICMKNV 436
Query: 204 SLLVQAPSVKWQCRFVSGF 222
+LL AP+ KW C FVSGF
Sbjct: 437 TLLGLAPAAKWHCEFVSGF 455
>gi|225431447|ref|XP_002274138.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 488
Score = 282 bits (722), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 151/259 (58%), Positives = 179/259 (69%), Gaps = 38/259 (14%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
M W+LWWN TL+HTRGHL+E+ NS NILI SNLTF NSP TIHPVYC N +K +T+L+
Sbjct: 198 MWWELWWNRTLEHTRGHLLEIKNSHNILI-SNLTFMNSPFWTIHPVYCSNVVIKDVTILA 256
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
PL+APNTDG+DPD CYIESG+ LVAVKSGWD GIAMARPSSNI VRR+SGT
Sbjct: 257 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSSNIIVRRLSGT 316
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVW----------MQQQGSY----------KDRLR 151
TPTCSGVGIG EMSG I NVT+ L +W + +G Y +R++
Sbjct: 317 TPTCSGVGIGSEMSGGISNVTMEDLHIWDSAAGVRIKTDKGRGGYVVNITINNIRMERVK 376
Query: 152 L--------YGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
+ HP +GWDPKA+PKI GI NVVS+N+TKAP+L GI G +E ICMKNV
Sbjct: 377 VPIRFSRGSNDHPDDGWDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGAPYEGICMKNV 436
Query: 204 SLLVQAPSVKWQCRFVSGF 222
+LL AP+ KW C FVSGF
Sbjct: 437 TLLGLAPAAKWHCEFVSGF 455
>gi|449532729|ref|XP_004173333.1| PREDICTED: probable polygalacturonase-like, partial [Cucumis
sativus]
Length = 332
Score = 282 bits (721), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 148/259 (57%), Positives = 178/259 (68%), Gaps = 38/259 (14%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
M W+LWWN TL HTRGHLVEL+NS NILI SNLTF NSP TIHPVYC N +K MT+L+
Sbjct: 51 MWWELWWNRTLNHTRGHLVELINSHNILI-SNLTFKNSPFWTIHPVYCSNVVIKDMTILA 109
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
PL+APNTDG+DPD CYIESG+ LVAVKSGWD GI +ARPSSNI +RRVSGT
Sbjct: 110 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGINLARPSSNIVIRRVSGT 169
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVW----------MQQQGSY----------KDRLR 151
TPTCSGVGIG EMSG I N+T+ L+VW Q +G Y +R++
Sbjct: 170 TPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIRIKSDQGRGGYIANVSITNFVMNRVK 229
Query: 152 LY--------GHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
+ HP E +DPKA+PK+ GI N++S+N+TKAPVL GI GT ++ +CMKNV
Sbjct: 230 MAIRFSRGSNDHPDEQFDPKAVPKVKGIFITNLMSLNSTKAPVLYGIAGTSYDGVCMKNV 289
Query: 204 SLLVQAPSVKWQCRFVSGF 222
++L PS KW C FVSGF
Sbjct: 290 TILGLTPSAKWHCAFVSGF 308
>gi|449459262|ref|XP_004147365.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 472
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 148/260 (56%), Positives = 179/260 (68%), Gaps = 38/260 (14%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
M W+LWWN TL HTRGHLVEL+NS NILI SNLTF NSP TIHPVYC N +K MT+L+
Sbjct: 191 MWWELWWNRTLNHTRGHLVELINSHNILI-SNLTFKNSPFWTIHPVYCSNVVIKDMTILA 249
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
PL+APNTDG+DPD CYIESG+ LVAVKSGWD GI +ARPSSNI +RRVSGT
Sbjct: 250 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGINLARPSSNIVIRRVSGT 309
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVW----------MQQQGSY----------KDRLR 151
TPTCSGVGIG EMSG I N+T+ L+VW Q +G Y +R++
Sbjct: 310 TPTCSGVGIGSEMSGGISNITIEDLNVWDSAAGIRIKSDQGRGGYIANVSITNFVMNRVK 369
Query: 152 LY--------GHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
+ HP E +DPKA+PK+ GI N++S+N+TKAPVL GI GT ++ +CMKNV
Sbjct: 370 MAIRFSRGSNDHPDEQFDPKAVPKVKGIFITNLMSLNSTKAPVLYGIAGTSYDGVCMKNV 429
Query: 204 SLLVQAPSVKWQCRFVSGFN 223
++L PS KW C FVSGF+
Sbjct: 430 TILGLTPSAKWHCAFVSGFS 449
>gi|147776708|emb|CAN76963.1| hypothetical protein VITISV_043959 [Vitis vinifera]
Length = 479
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 150/259 (57%), Positives = 178/259 (68%), Gaps = 38/259 (14%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
M W+LWWN TL+HTRGHL+E+ NS NILI SNLTF NSP TIHPVYC N +K +T+L+
Sbjct: 187 MWWELWWNRTLEHTRGHLLEIKNSHNILI-SNLTFMNSPFWTIHPVYCSNVVIKDVTILA 245
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
PL+APNTDG+DPD CYIESG+ LVAVKSGWD GIAMARPSSNI VRR+SGT
Sbjct: 246 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIAMARPSSNIIVRRLSGT 305
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVW----------MQQQGSY----------KDRLR 151
TPTCSGVGIG EMSG I NVT+ L +W + +G Y +R++
Sbjct: 306 TPTCSGVGIGSEMSGGISNVTMEDLHIWDSAAGVRIKTDKGRGGYVVNITINNIRMERVK 365
Query: 152 L--------YGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
+ HP + WDPKA+PKI GI NVVS+N+TKAP+L GI G +E ICMKNV
Sbjct: 366 VPIRFSRGSNDHPDDXWDPKAVPKIKGIFISNVVSLNSTKAPLLEGIEGAPYEGICMKNV 425
Query: 204 SLLVQAPSVKWQCRFVSGF 222
+LL AP+ KW C FVSGF
Sbjct: 426 TLLGLAPAAKWHCEFVSGF 444
>gi|224083446|ref|XP_002307030.1| predicted protein [Populus trichocarpa]
gi|222856479|gb|EEE94026.1| predicted protein [Populus trichocarpa]
Length = 394
Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 150/259 (57%), Positives = 174/259 (67%), Gaps = 38/259 (14%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
M W+LWWN TL+HTRGHLVELMNS +ILI SNLTF NSP TIHP+YC N VK MT+L+
Sbjct: 122 MWWELWWNRTLEHTRGHLVELMNSQDILI-SNLTFRNSPFWTIHPIYCSNLVVKDMTILA 180
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
PL+APNTDG+DPD CYIESG+ LVAVKSGWD GI MARPSSNI +RRVSGT
Sbjct: 181 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKMARPSSNIIIRRVSGT 240
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVW----------MQQQGSY----------KDRLR 151
TPTCSGVGIG EMSG IFNVT+ L VW + +G Y +R++
Sbjct: 241 TPTCSGVGIGSEMSGGIFNVTIEDLHVWDSAAGVRIKTDKGRGGYIANITISDITMERVK 300
Query: 152 L--------YGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
+ HP E WDPKA+P + G+S N+VS N+TKAPVL GI F ICMKN+
Sbjct: 301 IPIRFSSGSNDHPDERWDPKAVPVVKGVSITNLVSFNSTKAPVLEGIEDAPFGGICMKNI 360
Query: 204 SLLVQAPSVKWQCRFVSGF 222
SLL S W+C FVSGF
Sbjct: 361 SLLGVVSSPSWRCEFVSGF 379
>gi|255571381|ref|XP_002526639.1| polygalacturonase, putative [Ricinus communis]
gi|223534031|gb|EEF35751.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 149/262 (56%), Positives = 169/262 (64%), Gaps = 38/262 (14%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
M W+LWWN TL+HTRGHLVELMNS NILI SNLTF NSP TIHPVYC N VK MT+L+
Sbjct: 199 MWWELWWNRTLEHTRGHLVELMNSHNILI-SNLTFRNSPFWTIHPVYCSNVVVKDMTILA 257
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
PL+APNTDG+DPD CYIESG+ LVAVKSGWD GI ARPSS+I VRRVSGT
Sbjct: 258 PLNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGIKTARPSSHIIVRRVSGT 317
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRLYG------- 154
TPTCSGVGIG EMSG IFNV + L +W +G Y + L+
Sbjct: 318 TPTCSGVGIGSEMSGGIFNVMIQDLHIWDSAAGVRIKTDIGRGGYISNITLHNITMERVK 377
Query: 155 -----------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
HP E WDP AIP + G+S NV+ VN+TKAPVL GI F ICMKNV
Sbjct: 378 IPIRFSRGSNDHPDERWDPNAIPVVKGVSISNVICVNSTKAPVLQGIKDAPFGGICMKNV 437
Query: 204 SLLVQAPSVKWQCRFVSGFNGQ 225
+L+ A S W C FVSGF +
Sbjct: 438 TLVGLASSTSWHCEFVSGFANE 459
>gi|356516364|ref|XP_003526865.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 477
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 144/259 (55%), Positives = 175/259 (67%), Gaps = 38/259 (14%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
M W+LWWN TL+HTRGHL+EL++S N+LI SNLTF NSP TIHPVYC N VKGMT+L+
Sbjct: 196 MWWELWWNRTLEHTRGHLLELISSDNVLI-SNLTFRNSPFWTIHPVYCSNVVVKGMTILA 254
Query: 61 PLSAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
PL+APNTDG+DPD YIESG+ LVA+KSGWDH GI MA PS+NI VRR+SGT
Sbjct: 255 PLNAPNTDGIDPDSSTNVCIEDNYIESGDDLVAIKSGWDHYGITMAHPSTNIIVRRISGT 314
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG----SYKDR-----------LRLY--- 153
TPTCSGVGIG EMSG I N+T+ +L VW G S K R +R+
Sbjct: 315 TPTCSGVGIGSEMSGGISNITIENLHVWDSAAGVRIKSDKGRGGYITNVSISDIRMERVK 374
Query: 154 ----------GHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
HP +GWDPKA+P+ I NVVSVN+TKAPVL G+ G+ FE +C KN+
Sbjct: 375 IPIRFSRGSNDHPDDGWDPKAVPRFKDILISNVVSVNSTKAPVLEGVEGSSFEGLCFKNI 434
Query: 204 SLLVQAPSVKWQCRFVSGF 222
+L A S +W+C +VSGF
Sbjct: 435 TLHGVALSARWRCEYVSGF 453
>gi|357464681|ref|XP_003602622.1| Germin-like protein [Medicago truncatula]
gi|355491670|gb|AES72873.1| Germin-like protein [Medicago truncatula]
Length = 775
Score = 268 bits (686), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 139/259 (53%), Positives = 173/259 (66%), Gaps = 38/259 (14%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
M W+LWWN TL HTRGHL+ELMNS N+L+ SNLTF NSP TIHPVYC N +KGMT+L+
Sbjct: 197 MWWELWWNRTLVHTRGHLLELMNSENVLV-SNLTFRNSPFWTIHPVYCSNVVIKGMTILA 255
Query: 61 PLSAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
PL+APNTDG+DPD YIESG+ LVA+KSGWD GIA+A+PS+NI V RVSGT
Sbjct: 256 PLNAPNTDGIDPDSSTNVCIEDNYIESGDDLVAIKSGWDQYGIAVAKPSTNIIVSRVSGT 315
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSY----------KDRLR 151
TPTCSGVGIG EMSG I N+T+ +L VW +G Y +R++
Sbjct: 316 TPTCSGVGIGSEMSGGISNITIENLHVWNSAAGVRIKSDNGRGGYIKNVSISNIRMERVK 375
Query: 152 L--------YGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
+ HP +GWDPKA+P+ I NV+SVN+TKAPVL G+ G+ FE +C KN+
Sbjct: 376 IPIRFSRGSNDHPDDGWDPKAVPRFKDILISNVISVNSTKAPVLEGVKGSSFEGLCFKNI 435
Query: 204 SLLVQAPSVKWQCRFVSGF 222
+ L A S W C +V+GF
Sbjct: 436 TFLGVALSATWHCEYVAGF 454
>gi|22329119|ref|NP_195070.2| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|27754320|gb|AAO22613.1| putative polygalacturonase [Arabidopsis thaliana]
gi|28393881|gb|AAO42348.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332660825|gb|AEE86225.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 475
Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 135/259 (52%), Positives = 170/259 (65%), Gaps = 38/259 (14%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
M W+LWWN TL HTRGHL+EL NS NILI SNLT NSP TIHPVYC N ++ MT+L+
Sbjct: 193 MWWELWWNRTLVHTRGHLIELKNSHNILI-SNLTLLNSPFWTIHPVYCSNVVIRNMTILA 251
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P++APNTDG+DPD CYIESG+ LVAVKSGWD G+A+ARPSSNI +RR+SGT
Sbjct: 252 PMNAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGMAVARPSSNIVIRRISGT 311
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG------------------------SYK 147
T TCSGVGIG EMSG IFN+TV + VW G K
Sbjct: 312 TRTCSGVGIGSEMSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVK 371
Query: 148 DRLRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
+R H + WDPKA+P++ GI NVVS+N+ KAP+L G+ GT F+++C++NV
Sbjct: 372 VPIRFSSGSNDHSDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSFQDVCLRNV 431
Query: 204 SLLVQAPSVKWQCRFVSGF 222
+LL + KW+C+ VSG+
Sbjct: 432 TLLGLPKTEKWKCKDVSGY 450
>gi|297802658|ref|XP_002869213.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315049|gb|EFH45472.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 133/259 (51%), Positives = 169/259 (65%), Gaps = 38/259 (14%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
M W+LWWN TL HTRGHL+EL N NILI SNLT NSP TIHPVYC N ++ MT+L+
Sbjct: 193 MWWELWWNRTLVHTRGHLIELKNCHNILI-SNLTLLNSPFWTIHPVYCSNVVIRNMTILA 251
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P++APNTDG+DPD CYIESG+ L+AVKSGWD G+A+ARPSSNI +RR+SGT
Sbjct: 252 PINAPNTDGIDPDSSTNVCIEDCYIESGDDLIAVKSGWDQYGMAVARPSSNIVIRRISGT 311
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG------------------------SYK 147
T TCSGVGIG EMSG IFN+TV + VW G K
Sbjct: 312 TRTCSGVGIGSEMSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVK 371
Query: 148 DRLRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
+R H + WDPKA+P++ GI NVVS+N+ KAP+L G+ GT F+++C++NV
Sbjct: 372 VPIRFSSGSNDHSDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSFQDVCLRNV 431
Query: 204 SLLVQAPSVKWQCRFVSGF 222
+LL + KW+C+ VSG+
Sbjct: 432 TLLGLPQTEKWKCKDVSGY 450
>gi|326524051|dbj|BAJ97036.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 482
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 125/258 (48%), Positives = 160/258 (62%), Gaps = 38/258 (14%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
M W+LWWN TL HTRGHL+EL+NS+N+LI SN+T NSP T+HPVYCRN +K +T+L+
Sbjct: 200 MWWELWWNRTLNHTRGHLIELVNSTNVLI-SNVTLRNSPFWTVHPVYCRNVVIKDLTILA 258
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
PL+APNTDG+DPD CYIESG+ LVAVKSGWD GI++ +PSSNI ++RVSGT
Sbjct: 259 PLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQRVSGT 318
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRLYG------- 154
TPTCSGVG G EMSG I NV V L +W +G Y + +
Sbjct: 319 TPTCSGVGFGSEMSGGISNVLVRDLHIWNSASAVRLKTDVGRGGYITNITIANVTMEKVK 378
Query: 155 -----------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
H + +D A+P ISGI V++V V+ +AP+L + G +E IC +NV
Sbjct: 379 VPIRFSRGSDDHSDDKYDRTALPMISGIHIVDIVGVDVQRAPMLEAVHGAVYEGICFRNV 438
Query: 204 SLLVQAPSVKWQCRFVSG 221
SL V+WQC V G
Sbjct: 439 SLRAIRRQVRWQCESVYG 456
>gi|326516252|dbj|BAJ88149.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 297
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 125/258 (48%), Positives = 160/258 (62%), Gaps = 38/258 (14%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
M W+LWWN TL HTRGHL+EL+NS+N+LI SN+T NSP T+HPVYCRN +K +T+L+
Sbjct: 15 MWWELWWNRTLNHTRGHLIELVNSTNVLI-SNVTLRNSPFWTVHPVYCRNVVIKDLTILA 73
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
PL+APNTDG+DPD CYIESG+ LVAVKSGWD GI++ +PSSNI ++RVSGT
Sbjct: 74 PLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQRVSGT 133
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRLYG------- 154
TPTCSGVG G EMSG I NV V L +W +G Y + +
Sbjct: 134 TPTCSGVGFGSEMSGGISNVLVRDLHIWNSASAVRLKTDVGRGGYITNITIANVTMEKVK 193
Query: 155 -----------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
H + +D A+P ISGI V++V V+ +AP+L + G +E IC +NV
Sbjct: 194 VPIRFSRGSDDHSDDKYDRTALPMISGIHIVDIVGVDVQRAPMLEAVHGAVYEGICFRNV 253
Query: 204 SLLVQAPSVKWQCRFVSG 221
SL V+WQC V G
Sbjct: 254 SLRAIRRQVRWQCESVYG 271
>gi|115474399|ref|NP_001060796.1| Os08g0107300 [Oryza sativa Japonica Group]
gi|42408232|dbj|BAD09389.1| putative exo-poly-alpha-D-galacturonosidase precursor [Oryza sativa
Japonica Group]
gi|113622765|dbj|BAF22710.1| Os08g0107300 [Oryza sativa Japonica Group]
Length = 482
Score = 229 bits (585), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 123/256 (48%), Positives = 157/256 (61%), Gaps = 38/256 (14%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WDLWWN TL HTRGHL+EL++S+NI+I SN+T NSP T+HPVYCRN ++ +TVL+PL
Sbjct: 203 WDLWWNRTLNHTRGHLIELVDSTNIMI-SNITLRNSPFWTVHPVYCRNVVIRNLTVLAPL 261
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+APNTDG+DPD CYIESG+ LVAVKSGWD GI++ +PSSNI ++RVSGTTP
Sbjct: 262 NAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQRVSGTTP 321
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQ----------GSYKDRLRLYG--------- 154
TCSGVG G EMSG I NV + L VW Q G Y + +
Sbjct: 322 TCSGVGFGSEMSGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRMEKVKVP 381
Query: 155 ---------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
H + +D A+PKIS + +VV V+ +AP+L + G +E IC +NVSL
Sbjct: 382 IRFSRGADDHSDDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGICFRNVSL 441
Query: 206 LVQAPSVKWQCRFVSG 221
V +W C V G
Sbjct: 442 TVIKRQDRWHCESVYG 457
>gi|125559874|gb|EAZ05322.1| hypothetical protein OsI_27527 [Oryza sativa Indica Group]
Length = 482
Score = 229 bits (585), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 123/256 (48%), Positives = 157/256 (61%), Gaps = 38/256 (14%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WDLWWN TL HTRGHL+EL++S+NI+I SN+T NSP T+HPVYCRN ++ +TVL+PL
Sbjct: 203 WDLWWNRTLNHTRGHLIELVDSTNIMI-SNITLRNSPFWTVHPVYCRNVVIRNLTVLAPL 261
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+APNTDG+DPD CYIESG+ LVAVKSGWD GI++ +PSSNI ++RVSGTTP
Sbjct: 262 NAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQRVSGTTP 321
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQ----------GSYKDRLRLYG--------- 154
TCSGVG G EMSG I NV + L VW Q G Y + +
Sbjct: 322 TCSGVGFGSEMSGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRMEKVKVP 381
Query: 155 ---------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
H + +D A+PKIS + +VV V+ +AP+L + G +E IC +NVSL
Sbjct: 382 IRFSRGADDHSDDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGICFRNVSL 441
Query: 206 LVQAPSVKWQCRFVSG 221
V +W C V G
Sbjct: 442 TVIKRQDRWHCESVYG 457
>gi|125601928|gb|EAZ41253.1| hypothetical protein OsJ_25761 [Oryza sativa Japonica Group]
Length = 482
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 123/256 (48%), Positives = 157/256 (61%), Gaps = 38/256 (14%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WDLWWN TL HTRGHL+EL++S+NI+I SN+T NSP T+HPVYCRN ++ +TVL+PL
Sbjct: 203 WDLWWNRTLNHTRGHLIELVDSTNIMI-SNITLRNSPFWTVHPVYCRNVVIRNLTVLAPL 261
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+APNTDG+DPD CYIESG+ LVAVKSGWD GI++ +PSSNI ++RVSGTTP
Sbjct: 262 NAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQRVSGTTP 321
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQ----------GSYKDRLRLYG--------- 154
TCSGVG G EMSG I NV + L VW Q G Y + +
Sbjct: 322 TCSGVGFGSEMSGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRMEKVKVP 381
Query: 155 ---------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
H + +D A+PKIS + +VV V+ +AP+L + G +E IC +NVSL
Sbjct: 382 IRFSRGADDHSDDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGICFRNVSL 441
Query: 206 LVQAPSVKWQCRFVSG 221
V +W C V G
Sbjct: 442 TVIKRQDRWHCESVYG 457
>gi|242077899|ref|XP_002443718.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
gi|241940068|gb|EES13213.1| hypothetical protein SORBIDRAFT_07g000740 [Sorghum bicolor]
Length = 497
Score = 223 bits (568), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 121/258 (46%), Positives = 156/258 (60%), Gaps = 38/258 (14%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
M W+LWWN TL HTRGHL+EL+NS+NILI S++T NSP T+HPVYC N +K +T+L+
Sbjct: 216 MWWELWWNRTLNHTRGHLIELVNSTNILI-SSITLRNSPFWTVHPVYCSNVVMKDLTILA 274
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
PL+APNTDG+DPD CYIESG+ LVAVKSGWD GI++ +PS+NI ++RVSGT
Sbjct: 275 PLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISLGKPSTNIVIQRVSGT 334
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQ----------GSYKDRLRLYG------- 154
TPTCSGVG G EMSG I NV V L VW Q G Y + +
Sbjct: 335 TPTCSGVGFGSEMSGGISNVLVRDLHVWNSAQAVRLKTDVGRGGYITNITISNVTMEKVK 394
Query: 155 -----------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
H + +D A+P+IS + +VV V+ +AP+L + G +EEIC +N
Sbjct: 395 VPIRFSRGADDHSDDNYDRTALPRISNVLISDVVGVDLQRAPMLEAVPGAVYEEICFRNF 454
Query: 204 SLLVQAPSVKWQCRFVSG 221
SL +W C V G
Sbjct: 455 SLRGIRRQDRWHCESVYG 472
>gi|226491354|ref|NP_001148255.1| polygalacturonase [Zea mays]
gi|195616976|gb|ACG30318.1| polygalacturonase [Zea mays]
gi|219888097|gb|ACL54423.1| unknown [Zea mays]
gi|413941563|gb|AFW74212.1| polygalacturonase [Zea mays]
Length = 493
Score = 219 bits (557), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 119/260 (45%), Positives = 155/260 (59%), Gaps = 40/260 (15%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
M W+LW N TL HTRGHL+EL+NS+N+LI S++T NSP T+HPVYC N +K +T+L+
Sbjct: 210 MWWELWRNRTLNHTRGHLIELVNSTNVLI-SSVTLSNSPFWTVHPVYCSNVVMKDLTILA 268
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
PL APNTDG+DPD CYIESG+ LVAVKSGWD GI+ +PS+NI ++RVSGT
Sbjct: 269 PLDAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISFGKPSTNIVIQRVSGT 328
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQ----------GSYKDRLRLYG------- 154
TPTCSGVG G EMSG I NV V L VW Q G Y + +
Sbjct: 329 TPTCSGVGFGSEMSGGISNVLVRDLHVWNSAQAVRLKTDVGRGGYITNITIASVAMEKVK 388
Query: 155 -----------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
HP + +DP A+P+IS + +VV V+ +AP+L + G +E IC +N
Sbjct: 389 VPIRFSRGADDHPDDRYDPAALPRISNVLVSDVVGVHLQRAPMLEAVPGAVYEGICFRNF 448
Query: 204 SL--LVQAPSVKWQCRFVSG 221
S + + +W C V G
Sbjct: 449 SFRGIRRQQDSRWHCESVYG 468
>gi|357139453|ref|XP_003571296.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 485
Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 118/262 (45%), Positives = 162/262 (61%), Gaps = 42/262 (16%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
M W+LWWN TL HTRGHL+EL+NS+N++I SN+T NSP T+HPVYCRN +K +T+L+
Sbjct: 200 MWWELWWNRTLNHTRGHLIELVNSTNVMI-SNVTLRNSPFWTVHPVYCRNVVIKDLTILA 258
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
PL+APNTDG+DPD CYIESG+ LVA+KSGWD GI++ +PS+NI ++RVSGT
Sbjct: 259 PLNAPNTDGIDPDSSSDVCIEDCYIESGDDLVAIKSGWDQYGISVNKPSTNIIIQRVSGT 318
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSY----------KDRLR 151
TPTCSGVGIG EMSG + V + L VW +G + +R++
Sbjct: 319 TPTCSGVGIGSEMSGGVSGVLIRDLHVWNSASAVRIKTDVGRGGFVTNVTVANVTMERVK 378
Query: 152 L--------YGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
+ H + +D A+P IS + V++V V+ +AP+L + G +E IC +NV
Sbjct: 379 VPIRFSRGSDDHSDDKYDRTALPTISDVRIVDIVGVDVQRAPILEAVHGAVYEGICFRNV 438
Query: 204 SLLVQAPS----VKWQCRFVSG 221
SL ++ WQC V G
Sbjct: 439 SLRLREEVRRRHAGWQCESVYG 460
>gi|297817560|ref|XP_002876663.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322501|gb|EFH52922.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 112/260 (43%), Positives = 149/260 (57%), Gaps = 40/260 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + N L +TR HLVELMNS+ LIISNLTF NSP IHPVYCR+ VK +T+L+PL
Sbjct: 166 WDWFRNGELNYTRPHLVELMNSTG-LIISNLTFLNSPFWNIHPVYCRDVVVKNLTILAPL 224
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DPD CYI +G+ LV++KSGWD GI+ ARPSS I + R++G T
Sbjct: 225 ESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINRLTGQTT 284
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG------------------------SYKDR 149
+ SG+ IG EMSG + + + L ++ G + K
Sbjct: 285 SSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSPGRGGYVRNVHILNVKLDNVKKA 344
Query: 150 LRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
+R G HP E +DPKA+P I I+F NV A +L GI G +F+ IC NV+L
Sbjct: 345 IRFTGKYGEHPDEKFDPKALPAIEKITFENVNGDGIGVAGLLEGIAGDEFKNICFLNVTL 404
Query: 206 LVQAPSVK--WQCRFVSGFN 223
V+ S K W+C V G++
Sbjct: 405 RVKKNSKKSPWECSNVRGYS 424
>gi|18412253|ref|NP_567126.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|11762132|gb|AAG40344.1|AF324992_1 AT3g62110 [Arabidopsis thaliana]
gi|23397166|gb|AAN31866.1| unknown protein [Arabidopsis thaliana]
gi|332646790|gb|AEE80311.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 471
Score = 192 bits (488), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 112/260 (43%), Positives = 148/260 (56%), Gaps = 40/260 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + N L +TR HLVELMNS+ LIISNLTF NSP IHPVYCR+ VK +T+L+PL
Sbjct: 166 WDWFRNGELNYTRPHLVELMNSTG-LIISNLTFLNSPFWNIHPVYCRDVVVKNLTILAPL 224
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DPD CYI +G+ LV++KSGWD GI+ ARPSS I + R++G T
Sbjct: 225 ESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINRLTGQTT 284
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG------------------------SYKDR 149
+ SG+ IG EMSG + + + L ++ G + K
Sbjct: 285 SSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSAGRGGYVRNVHILNVKLDNVKKA 344
Query: 150 LRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
+R G HP E +DPKA+P I I+F NV A +L GI G F+ IC NV+L
Sbjct: 345 IRFTGKYGEHPDEKYDPKALPAIEKITFENVNGDGIGVAGLLEGIEGDVFKNICFLNVTL 404
Query: 206 LVQAPSVK--WQCRFVSGFN 223
V+ S K W+C V G++
Sbjct: 405 RVKKNSKKSPWECSNVRGYS 424
>gi|6899921|emb|CAB71871.1| putative protein [Arabidopsis thaliana]
Length = 470
Score = 192 bits (488), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 112/260 (43%), Positives = 148/260 (56%), Gaps = 40/260 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + N L +TR HLVELMNS+ LIISNLTF NSP IHPVYCR+ VK +T+L+PL
Sbjct: 165 WDWFRNGELNYTRPHLVELMNSTG-LIISNLTFLNSPFWNIHPVYCRDVVVKNLTILAPL 223
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DPD CYI +G+ LV++KSGWD GI+ ARPSS I + R++G T
Sbjct: 224 ESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINRLTGQTT 283
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG------------------------SYKDR 149
+ SG+ IG EMSG + + + L ++ G + K
Sbjct: 284 SSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSAGRGGYVRNVHILNVKLDNVKKA 343
Query: 150 LRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
+R G HP E +DPKA+P I I+F NV A +L GI G F+ IC NV+L
Sbjct: 344 IRFTGKYGEHPDEKYDPKALPAIEKITFENVNGDGIGVAGLLEGIEGDVFKNICFLNVTL 403
Query: 206 LVQAPSVK--WQCRFVSGFN 223
V+ S K W+C V G++
Sbjct: 404 RVKKNSKKSPWECSNVRGYS 423
>gi|357511567|ref|XP_003626072.1| Polygalacturonase [Medicago truncatula]
gi|355501087|gb|AES82290.1| Polygalacturonase [Medicago truncatula]
Length = 466
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/264 (40%), Positives = 150/264 (56%), Gaps = 51/264 (19%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W ++ N TL +TR HLVELMNS+ +LI SNLTF NSP TIHPVYC V+ +T+L+PL
Sbjct: 166 WSMFRNKTLDYTRPHLVELMNSTRVLI-SNLTFLNSPFWTIHPVYCSQVTVQNVTILAPL 224
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DPD CYI +G+ L+A+KSGWD GIA RPS+NI + R+ G T
Sbjct: 225 DSPNTDGIDPDSSDDVCIEDCYISTGDDLIAIKSGWDEYGIAFGRPSTNIVIHRLVGKTH 284
Query: 114 TCSGVGIGREMSG----------------------------------RIFNVTVNHLDVW 139
T +G+ IG EMSG + N+T+ ++D+
Sbjct: 285 TSAGIAIGSEMSGGVSDVRAEDIHFYDSYTAIRIKTSPGRGGYVRNIYVTNMTLANVDIA 344
Query: 140 MQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEIC 199
++ GSY D HP + +DP A+P I I+ +V+ N TKA ++ GI G F IC
Sbjct: 345 IRFTGSYGD------HPDDAYDPNALPVIEKITIEDVIGENITKAGLIEGIEGDNFVNIC 398
Query: 200 MKNVSLLVQAPSVKWQCRFVSGFN 223
+ N++L V + + W C + G++
Sbjct: 399 LSNITLNVSS-NYPWNCSNIRGYS 421
>gi|297816204|ref|XP_002875985.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297321823|gb|EFH52244.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/260 (41%), Positives = 148/260 (56%), Gaps = 40/260 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + N L +TR HLVELMNS+ LIISNLTF NSP IHPVYCR+ VK +T+L+PL
Sbjct: 166 WDWFRNGELNYTRPHLVELMNSTG-LIISNLTFLNSPFWNIHPVYCRDVVVKNLTILAPL 224
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DP DCYI + + LV++K+GWD GI+ ARPSS I + R++G T
Sbjct: 225 ESPNTDGVDPDSSTNVCIEDCYIVTRDDLVSIKTGWDEYGISYARPSSKIKINRLTGQTT 284
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG------------------------SYKDR 149
+ SG+ IG EMSG + + + L ++ G + K
Sbjct: 285 SSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSPGRGGYVRNVHILNVKLDNVKKA 344
Query: 150 LRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
+R G HP + +DPKA+P I I+F NV A +L GI G +F+ IC NV+L
Sbjct: 345 IRFTGKYGEHPDKNFDPKALPAIEKITFENVNGDGIGVAGLLEGIEGDEFKNICFLNVTL 404
Query: 206 LVQAPSVK--WQCRFVSGFN 223
V+ S K W+C V G++
Sbjct: 405 RVKKNSKKSPWECSNVRGYS 424
>gi|168005670|ref|XP_001755533.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693240|gb|EDQ79593.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 393
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/256 (41%), Positives = 146/256 (57%), Gaps = 38/256 (14%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD ++N TL +TRGHLVEL++SS+ILI SNLTF +SP TIHPVYCRN VK MT+L+PL
Sbjct: 129 WDAFYNKTLDYTRGHLVELIDSSDILI-SNLTFRDSPFWTIHPVYCRNVVVKDMTILAPL 187
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DP DCYI G+ +A+KSGWD G + PS +I VRR++ +
Sbjct: 188 DSPNTDGIDPDSSHNVCIEDCYISVGHDAIAIKSGWDEYGTSYGMPSKHIDVRRITVHSK 247
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRL----------- 152
T +G+ G EMSG I +V V+H+ ++ + +G Y + +
Sbjct: 248 TSAGIAFGSEMSGGISDVKVDHMMIFGARWGIRFKTGLGRGGYIRNVTVDNVDMHSVGTA 307
Query: 153 ------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
YG HP E W+ P I IS NVV N T A + G+ + F I + N++L
Sbjct: 308 IAFTGNYGEHPDENWNRTDYPVIENISIENVVGENITHAGLFLGLPESPFHNIHLANIAL 367
Query: 206 LVQAPSVKWQCRFVSG 221
V++ S W C V+G
Sbjct: 368 DVKSESDDWNCSSVAG 383
>gi|109509138|gb|ABG34278.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 307
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/260 (40%), Positives = 148/260 (56%), Gaps = 40/260 (15%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
M W+ + N TL +TR HLVELMNS+ + +ISNLTF NSP TIHP+YC + V+ +T+ +
Sbjct: 3 MWWERFRNKTLDYTRPHLVELMNSTGV-VISNLTFLNSPFWTIHPIYCSHVIVQNVTIRA 61
Query: 61 PLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
PL +PNTDG+DP DCYI +G+ ++A+KSGWD GI+ RPS NI +RR+ G
Sbjct: 62 PLDSPNTDGIDPDSSDDVCIEDCYISTGDDVIAIKSGWDEYGISYGRPSKNIIIRRLIGE 121
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG------------------------SYK 147
T + SG+ IG EMSG + +V + + G + K
Sbjct: 122 THS-SGIAIGSEMSGGVSDVHAEDIVFFNSTTGIRIKTSPGRGGYVRNIFISNVSLANVK 180
Query: 148 DRLRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
+R G HP E +DPKA+PKI I+F ++ N T A ++ GI G F IC+ N+
Sbjct: 181 VAIRFTGRYGEHPDESYDPKAMPKIERITFKDIHGENITVAGLMEGIEGDNFINICLYNI 240
Query: 204 SLLVQAPSVKWQCRFVSGFN 223
+L V + S W C V GF+
Sbjct: 241 TLSVNSIS-PWNCSNVQGFS 259
>gi|224130826|ref|XP_002320934.1| predicted protein [Populus trichocarpa]
gi|222861707|gb|EEE99249.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 144/260 (55%), Gaps = 44/260 (16%)
Query: 5 LWWN----STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+WWN TL +TR HLVELMN++ + +ISNLTF NSP TIHPVYC V+ +T+L+
Sbjct: 157 IWWNWFRNETLDYTRPHLVELMNTTGV-VISNLTFLNSPFWTIHPVYCSQVIVQNVTILA 215
Query: 61 PLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
PL +PNTDG+DP DCYI +G+ ++A+KSGWD G + ARPS NI +R + G
Sbjct: 216 PLDSPNTDGIDPDSSDDVCIEDCYISTGDDIIAIKSGWDEYGTSYARPSKNITIRGLVGQ 275
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG------------------------SYK 147
T T +G+ IG EMSG + V +L + G K
Sbjct: 276 T-TSAGIAIGSEMSGGVSEVHAENLTFYNSTTGIRIKTAPGRGGYVRNIYISNMSLTDVK 334
Query: 148 DRLRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
+R G HP E +DPKA+P I I+ +V N A +L G+ G F +IC+ N+
Sbjct: 335 TAIRFTGQYGDHPDESYDPKALPLIERITIDDVTGQNVKYAGLLEGLEGDTFLDICLSNI 394
Query: 204 SLLVQAPSVKWQCRFVSGFN 223
+L V + S W C ++ G++
Sbjct: 395 NLSVTSKS-PWNCSYIQGYS 413
>gi|359480238|ref|XP_002273855.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
gi|297744085|emb|CBI37055.3| unnamed protein product [Vitis vinifera]
Length = 466
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 145/260 (55%), Gaps = 43/260 (16%)
Query: 5 LWWN----STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+WWN TL +TR HLVE +NS+ + +ISN+TF NSP TIHPVYC ++ +T+L+
Sbjct: 164 IWWNWFQKKTLNYTRPHLVEFINSTGV-VISNVTFLNSPFWTIHPVYCSQVIIQNVTILA 222
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
PL +PNTDG+DPD CYI +G+ L+A+KSGWD GI+ ARPS+NI +RR+ G
Sbjct: 223 PLDSPNTDGIDPDSSNDVCIEDCYISTGDDLIAIKSGWDEYGISYARPSTNIIIRRLVGK 282
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG------------------------SYK 147
T + +G+ IG EMSG + V L + + G K
Sbjct: 283 TNSSAGIAIGSEMSGGVSEVHAESLQFFNSKTGIRIKTSPGRGGYVRNIYISDMNLVDVK 342
Query: 148 DRLRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
+R G HP E +DP A+P I I+ +V+ N A +L GI G F IC+ N+
Sbjct: 343 IAIRFTGQYGEHPDEFYDPTALPIIENITVKDVMGENIKFAGLLEGIEGDNFVNICLSNI 402
Query: 204 SLLVQAPSVKWQCRFVSGFN 223
+L V + S W C ++ G++
Sbjct: 403 TLNVTSES-PWNCSYIHGYS 421
>gi|356501839|ref|XP_003519731.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 179 bits (455), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 101/258 (39%), Positives = 150/258 (58%), Gaps = 40/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W+ +WN TL +TR HLVELMNS+ +LI SN+TF NSP TIHPVYC + ++ +T+++PL
Sbjct: 174 WNNFWNKTLNYTRPHLVELMNSTGVLI-SNVTFLNSPFWTIHPVYCSHVTIQNVTIIAPL 232
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
S+PNTDG++P DCYI +G+ L+++KSGWD GI+ RPS+NI +RR+ G T
Sbjct: 233 SSPNTDGINPDSSDNVCIEDCYISTGDDLISIKSGWDGYGISFGRPSTNINIRRLIGKT- 291
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLR------------ 151
T +G+ IG EMSG + V + ++ +G Y +
Sbjct: 292 TSAGIAIGSEMSGGVSEVHAEDIYIFDSHSAIRIKTSPGRGGYVRNVYISNMILANVDIA 351
Query: 152 -----LYG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
LYG HP + +DP A+P I I+ +V+ V A ++ GI G F IC+ N++L
Sbjct: 352 IRFTGLYGEHPDDTYDPDALPVIERITIKDVIGVKVKHAGLIQGIKGDNFVNICLSNITL 411
Query: 206 LVQAPSVKWQCRFVSGFN 223
V + + W C ++ GF+
Sbjct: 412 NVSS-KLPWNCSYIKGFS 428
>gi|357135554|ref|XP_003569374.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 448
Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 100/256 (39%), Positives = 142/256 (55%), Gaps = 39/256 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD+W TL TR HL+ELM+SS++ I+SNL F +SP IHPVYC N ++ +T+L+P
Sbjct: 169 WDMWKKGTLPFTRPHLLELMDSSDV-IVSNLVFRDSPFWNIHPVYCSNVVIRNLTILAPH 227
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DP DCYI +G+ LVA+KSGWD GIA RPSS+I VRR++G++P
Sbjct: 228 DSPNTDGIDPDSSSNVCIEDCYISTGDDLVAIKSGWDEYGIAYGRPSSDITVRRITGSSP 287
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSY------------------------KDR 149
+G +G E SG + NV HL+ + G + +
Sbjct: 288 -FAGFAVGSETSGGVENVLAEHLNFFSSGFGVHIKTNSGRGGFIRNVTVSDVTLDNVRYG 346
Query: 150 LRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
LR+ G HP E ++ A+PK+ ++ NV N +A + GI + F IC+ N+ L
Sbjct: 347 LRIAGDVGDHPDEHYNHNALPKVDSLTIKNVQGQNIKEAGSIKGIASSAFSRICLSNIKL 406
Query: 206 LVQAPSVKWQCRFVSG 221
P W+C VSG
Sbjct: 407 HGSVPVRPWKCESVSG 422
>gi|224064770|ref|XP_002301554.1| predicted protein [Populus trichocarpa]
gi|222843280|gb|EEE80827.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/258 (39%), Positives = 144/258 (55%), Gaps = 40/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + N TL +TR HLVE MN++ + +ISNLTF NSP TIHPVYC V+ +T+L+PL
Sbjct: 166 WDWFRNQTLNYTRPHLVEFMNTTGV-VISNLTFINSPFWTIHPVYCSQVIVQNVTILAPL 224
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DPD CY+ +G+ ++A+KSGWD G++ RPS NI +RR+ G T
Sbjct: 225 DSPNTDGIDPDSSDDVCVEDCYVSTGDDIIAIKSGWDEYGMSYGRPSKNITIRRLVGQT- 283
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQGS---------------YKDRLRL------ 152
T +G+ IG EMSG + V +L + G Y + L
Sbjct: 284 TSAGIAIGSEMSGGVSEVHAENLRFYNSTTGIRIKTSPGRGGYVRNIYISNMSLTDVKTA 343
Query: 153 ------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
YG HP E +DP A+P I I+ +V N A +L GI G F +IC+ N++L
Sbjct: 344 ISFTGRYGEHPDEYYDPTALPLIERITVEDVAGQNVKYAGLLEGIEGDTFLDICLLNINL 403
Query: 206 LVQAPSVKWQCRFVSGFN 223
V + S W C ++ G++
Sbjct: 404 SVTSKS-PWNCSYIQGYS 420
>gi|326488219|dbj|BAJ89948.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/256 (38%), Positives = 142/256 (55%), Gaps = 39/256 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD+W TL TR HL+ELM+SSN I+SNL F +SP IHPVYC N ++ +T+L+P
Sbjct: 171 WDMWKKGTLPFTRPHLLELMDSSNA-IVSNLVFQDSPFWNIHPVYCSNVVIRNLTILAPH 229
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DP DCYI +G+ L+A+KSGWD GIA RPSS+I +RR++G++P
Sbjct: 230 DSPNTDGIDPDSSSNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSSDITIRRITGSSP 289
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSY--------------------KDRLR-- 151
+G +G E SG + NV HL+ + G + D +R
Sbjct: 290 -FAGFSVGSETSGGVENVLAEHLNFYSSGFGVHIKTNSGRGGFIRNITVSDVILDNVRYG 348
Query: 152 ------LYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
+ GHP E ++ A+P + + NV N +A ++ GI + F IC+ N+ L
Sbjct: 349 LRIAGDVGGHPDERYNHNALPIVDSLMIKNVQGQNIKEAGLIKGIPNSAFSRICLSNIKL 408
Query: 206 LVQAPSVKWQCRFVSG 221
AP W+C+ VSG
Sbjct: 409 HGSAPVRPWKCQAVSG 424
>gi|326496364|dbj|BAJ94644.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509249|dbj|BAJ91541.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510305|dbj|BAJ87369.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518514|dbj|BAJ88286.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/256 (38%), Positives = 142/256 (55%), Gaps = 39/256 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD+W TL TR HL+ELM+SSN I+SNL F +SP IHPVYC N ++ +T+L+P
Sbjct: 171 WDMWKKGTLPFTRPHLLELMDSSNA-IVSNLVFQDSPFWNIHPVYCSNVVIRNLTILAPH 229
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DP DCYI +G+ L+A+KSGWD GIA RPSS+I +RR++G++P
Sbjct: 230 DSPNTDGIDPDSSSNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSSDITIRRITGSSP 289
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSY--------------------KDRLR-- 151
+G +G E SG + NV HL+ + G + D +R
Sbjct: 290 -FAGFSVGSETSGGVENVLAEHLNFYSSGFGVHIKTNSGRGGFIRNITVSDVILDNVRYG 348
Query: 152 ------LYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
+ GHP E ++ A+P + + NV N +A ++ GI + F IC+ N+ L
Sbjct: 349 LRIAGDVGGHPDERYNHNALPIVDSLMIKNVQGQNIKEAGLIKGIPNSAFSRICLSNIKL 408
Query: 206 LVQAPSVKWQCRFVSG 221
AP W+C+ VSG
Sbjct: 409 HGSAPVRPWKCQAVSG 424
>gi|356533489|ref|XP_003535296.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 472
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/258 (38%), Positives = 150/258 (58%), Gaps = 40/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W+ +WN TL +TR HLVELMNS+ +LI SN+TF NSP TIHPVYC + ++ +T+++PL
Sbjct: 174 WNNFWNKTLNYTRPHLVELMNSTGVLI-SNVTFMNSPFWTIHPVYCSHVTIQNVTIIAPL 232
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
S+PNTDG++P DCYI +G+ L+++KSGWD GI+ RPS+NI +RR+ G T
Sbjct: 233 SSPNTDGINPDSSDNVCIEDCYISTGDDLISIKSGWDGYGISFGRPSTNINIRRLIGKT- 291
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLR------------ 151
T +G+ IG EMSG + V + ++ +G Y +
Sbjct: 292 TSAGIAIGSEMSGGVSEVHAEDIYIFDSHSAIRIKTSPGRGGYVRNVYISNMILVNVDIA 351
Query: 152 -----LYG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
LYG HP + +DP A+P I I+ +V+ +A ++ GI G F IC+ N++L
Sbjct: 352 IRFTGLYGEHPDDTYDPDALPVIERITIKDVIGEKVKRAGLIQGIKGDNFVNICLSNITL 411
Query: 206 LVQAPSVKWQCRFVSGFN 223
V + + W C +V G++
Sbjct: 412 NV-SKKLPWNCSYVKGYS 428
>gi|242053639|ref|XP_002455965.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
gi|241927940|gb|EES01085.1| hypothetical protein SORBIDRAFT_03g028140 [Sorghum bicolor]
Length = 447
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/256 (38%), Positives = 143/256 (55%), Gaps = 39/256 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD+W TL +TR HL+ELM+SS+I I+SN+ F +SP IHPVYC N ++ +T+L+P
Sbjct: 168 WDMWKKGTLLYTRPHLLELMSSSHI-IVSNVVFQDSPFWNIHPVYCSNVVIRNVTILAPH 226
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DP DCYI +G+ +A+KSGWD GIA RPSS+I VRR++G++P
Sbjct: 227 DSPNTDGIDPDSSSNICIEDCYISTGDDAIAIKSGWDEYGIAYGRPSSDITVRRITGSSP 286
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSY------------------------KDR 149
+G +G E SG + NV HL+ + G + +
Sbjct: 287 -FAGFAVGSETSGGVENVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDNVRYG 345
Query: 150 LRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
LR+ G HP E ++ A+P + ++ NV N +A ++ GI + F IC+ NV L
Sbjct: 346 LRIVGDVGNHPDERYNRSALPIVDALTIKNVQGQNIKEAGLIKGIANSAFSRICLSNVKL 405
Query: 206 LVQAPSVKWQCRFVSG 221
AP W+C VSG
Sbjct: 406 TGGAPVQPWKCEAVSG 421
>gi|357122663|ref|XP_003563034.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 475
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/258 (39%), Positives = 141/258 (54%), Gaps = 39/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + N TL +TR HLVELM S+N+ +ISNLTF NSP IHPVYC V+ +T+L+PL
Sbjct: 166 WDWFHNHTLNYTRPHLVELMYSTNV-VISNLTFKNSPFWNIHPVYCSQVLVEHLTILAPL 224
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG++PD CY+ +G+ ++ +KSGWD GI+ A PSSNI++ ++G T
Sbjct: 225 DSPNTDGINPDSSTNICIKHCYVRNGDDVIVIKSGWDEYGISFAHPSSNISITNITGETR 284
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG------------------------SYKDR 149
+G+ IG EMSG I V L + G +
Sbjct: 285 GGAGIAIGSEMSGGISEVRAERLRIVNSLHGIRIKTAPGRGGYVRNVYIADVSMHNVSMA 344
Query: 150 LRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
+R+ G HP +D A+P IS I+ NVV +N A +L GI G F IC+ NVSL
Sbjct: 345 IRITGNYGEHPDNNYDRNALPMISNITIENVVGINVGIAGILEGIEGDNFSSICISNVSL 404
Query: 206 LVQAPSVKWQCRFVSGFN 223
VQ+ W C + G++
Sbjct: 405 SVQSMH-PWNCSLIQGYS 421
>gi|255589944|ref|XP_002535132.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223523955|gb|EEF27252.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 476
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 102/265 (38%), Positives = 143/265 (53%), Gaps = 55/265 (20%)
Query: 5 LWWN----STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+WW +L +TR HLVELMNSS I +ISNLTF NSP TIHPVYC V+ +T+ +
Sbjct: 174 IWWTWFKTESLNYTRPHLVELMNSSGI-VISNLTFINSPFWTIHPVYCSKVIVQNVTIRA 232
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
PL +PNTDG+DPD C+I +G+ L+A+KSGWD GI RP NI +RR+ G
Sbjct: 233 PLDSPNTDGIDPDSSDDVCIEDCFISTGDDLIAIKSGWDEYGILYGRPCRNITIRRLVGQ 292
Query: 112 TPTCSGVGIGREMSG----------------------------------RIFNVTVNHLD 137
T + +G+ IG EMSG + NVT+N ++
Sbjct: 293 TRSSAGIAIGSEMSGGVSEVHAENILFYNSNTGIRIKTSPGRGGYVRNIYVSNVTLNDVN 352
Query: 138 VWMQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEE 197
+ ++ G+Y + HP E +DPKA+P I I+ +V+ N A +L GI F
Sbjct: 353 IAIRFTGNYGE------HPDEHYDPKALPIIERITIEHVMGDNIKYAGILDGIEADSFVN 406
Query: 198 ICMKNVSLLVQAPSVKWQCRFVSGF 222
IC+ N+SL V + W C ++ G+
Sbjct: 407 ICLSNISLNVTS-KFPWNCSYIQGY 430
>gi|359807069|ref|NP_001241086.1| uncharacterized protein LOC100817309 precursor [Glycine max]
gi|255636991|gb|ACU18828.1| unknown [Glycine max]
Length = 467
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 103/263 (39%), Positives = 144/263 (54%), Gaps = 52/263 (19%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W+ +WN +L +TR HLVELMNS+ +LI SNLTF NSP TIHPVYC V+ + +L+P
Sbjct: 166 WNRFWNRSLDYTRPHLVELMNSTGVLI-SNLTFLNSPFWTIHPVYCSQVTVQNVRILAPH 224
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DP DCYI +G+ L+A+KSGWD GIA RPS+NI + R+ G T
Sbjct: 225 DSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSTNIIIHRLVGRTQ 284
Query: 114 TCSGVGIGREMSG----------------------------------RIFNVTVNHLDVW 139
T SG+ IG EMSG + NVT+ ++D+
Sbjct: 285 T-SGIAIGSEMSGGVSEVHAEDIQFYDSYNAIRIKTSPGRGGYVRNIYVSNVTLANVDIA 343
Query: 140 MQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEIC 199
+ G Y + HP + ++P A+P I I+ +VV N A ++ GI G F IC
Sbjct: 344 ITFTGLYGE------HPDDAYNPNALPVIEKITIKDVVGENIKTAGLIEGIEGDNFVNIC 397
Query: 200 MKNVSLLVQAPSVKWQCRFVSGF 222
+ N+ L V + + W C +V G+
Sbjct: 398 LSNIILNVTS-NYPWNCSYVKGY 419
>gi|302755072|ref|XP_002960960.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
gi|300171899|gb|EFJ38499.1| hypothetical protein SELMODRAFT_33152 [Selaginella moellendorffii]
Length = 393
Score = 176 bits (446), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 102/258 (39%), Positives = 142/258 (55%), Gaps = 40/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + N TL TRGHLVEL++S +I ISN+TF NSP TIHPVYC + ++ +T+L+P
Sbjct: 128 WDWFHNKTLDFTRGHLVELIDSRHI-TISNVTFKNSPFWTIHPVYCSDVLIQDVTILAPP 186
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
APN DG+DPD CYI +G+ L+++KSGWD GI PS+N+ + VSG +P
Sbjct: 187 YAPNIDGIDPDSSSNVCIRDCYISTGDDLISIKSGWDEHGINYGMPSTNVCIHNVSGQSP 246
Query: 114 TCSGVGIGREMSGRIFNVTVNHL---------------------------DVWMQQQGSY 146
T +G+ G EMSG I +V + + D+ ++
Sbjct: 247 TSAGIAFGSEMSGGISDVFIKSVRVANSRSGIRIKTGAGRGGYITNISISDLQLENVSVA 306
Query: 147 KDRLRLYG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
D LYG HP +G+DP+A+P I GIS +VV A +AG+ F ++C NVSL
Sbjct: 307 FDFTALYGGHPDDGYDPRALPVIRGISIRDVVGHEIGWAGCMAGLEEAPFRDLCFANVSL 366
Query: 206 LVQAPSVKWQCRFVSGFN 223
V A + W C GF+
Sbjct: 367 SVGAGA--WNCSNTYGFS 382
>gi|302767254|ref|XP_002967047.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
gi|300165038|gb|EFJ31646.1| hypothetical protein SELMODRAFT_408393 [Selaginella moellendorffii]
Length = 478
Score = 176 bits (445), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 102/258 (39%), Positives = 142/258 (55%), Gaps = 40/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + N TL TRGHLVEL++S +I ISN+TF NSP TIHPVYC + ++ +T+L+P
Sbjct: 185 WDWFHNKTLDFTRGHLVELIDSRHI-TISNVTFKNSPFWTIHPVYCSDVLIQDVTILAPP 243
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
APN DG+DPD CYI +G+ L+++KSGWD GI PS+N+ + VSG +P
Sbjct: 244 YAPNIDGIDPDSSSNVCIRDCYISTGDDLISIKSGWDEHGINYGMPSTNVCIHNVSGQSP 303
Query: 114 TCSGVGIGREMSGRIFNVTVNHL---------------------------DVWMQQQGSY 146
T +G+ G EMSG I +V + + D+ ++
Sbjct: 304 TSAGIAFGSEMSGGISDVFIKSVRVANSRSGIRIKTGAGRGGYITNISISDLQLENVSVA 363
Query: 147 KDRLRLYG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
D LYG HP +G+DP+A+P I GIS +VV A +AG+ F ++C NVSL
Sbjct: 364 FDFTALYGGHPDDGYDPRALPVIRGISIRDVVGHEIGWAGCMAGLEEAPFRDLCFANVSL 423
Query: 206 LVQAPSVKWQCRFVSGFN 223
V A + W C GF+
Sbjct: 424 SVGAGA--WNCSNTYGFS 439
>gi|308080756|ref|NP_001183080.1| uncharacterized protein LOC100501436 precursor [Zea mays]
gi|238009236|gb|ACR35653.1| unknown [Zea mays]
gi|414884141|tpg|DAA60155.1| TPA: hypothetical protein ZEAMMB73_186239 [Zea mays]
Length = 490
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/264 (38%), Positives = 147/264 (55%), Gaps = 51/264 (19%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + N TL +TR LVELM S+ + +ISNLTF NSP IHPVYC V+ +T+L+P+
Sbjct: 176 WDWFHNHTLNYTRPPLVELMYSTRV-VISNLTFINSPFWNIHPVYCSQVLVQHLTILAPI 234
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
S+PNTDG+DPD CY+ +G+ ++ +KSGWD GI+ A PSSNI++R ++G T
Sbjct: 235 SSPNTDGIDPDSSTNVCIEDCYVRNGDDIIVIKSGWDEYGISFAHPSSNISIRNITGQTR 294
Query: 114 TCSGVGIGREMSG----------RIFN------------------------VTVNHLDVW 139
+G+ G EMSG RI N V+ +++ +
Sbjct: 295 NSAGLAFGSEMSGGISDVRAEGVRIVNSVHGIRIKTAPGRGGYVKNVYVADVSFDNVSIA 354
Query: 140 MQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEIC 199
++ G+Y + HP +G+D A+P IS I+ +VV VN A +L GI G F IC
Sbjct: 355 IRITGNYGE------HPDDGYDRNALPTISNITIKDVVGVNIGVAGMLQGIPGDSFSGIC 408
Query: 200 MKNVSLLVQAPSVKWQCRFVSGFN 223
+ NVSL V++ W C V G++
Sbjct: 409 LSNVSLSVRSTD-PWNCSLVEGYS 431
>gi|148909907|gb|ABR18040.1| unknown [Picea sitchensis]
Length = 472
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/260 (37%), Positives = 146/260 (56%), Gaps = 40/260 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + LK+TRG+LVELM S +I IISNLTF NSP+ +HPVY N ++ +T+L+PL
Sbjct: 169 WQKFHKKILKNTRGYLVELMYSKDI-IISNLTFLNSPAWNLHPVYSSNILIQYVTILAPL 227
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DP DCY+ SG+ +VA+KSGWD GI+ PS +I +RR+ G +P
Sbjct: 228 DSPNTDGIDPDSCSYVRIEDCYVVSGDDIVAIKSGWDEYGISFGMPSQHIVIRRLVGISP 287
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG---------------SYKDRLRL------ 152
T + + +G EMSG I +V + + G + +R+ +
Sbjct: 288 TSAIIALGSEMSGGIQDVRAEDIQAINSETGIRIKTSPGRGGFVKDIFVNRMTMVNMKWA 347
Query: 153 ------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
YG HP +DP A+P + IS+ N+V+ N + A L GI F++IC+ NV++
Sbjct: 348 FTMTGSYGSHPDNKYDPNALPAVERISYSNIVATNVSVAGKLDGIANAPFKDICLTNVTI 407
Query: 206 LVQAPSVK--WQCRFVSGFN 223
+ A S K W C ++ G +
Sbjct: 408 TMAAKSKKYPWNCTYIHGLS 427
>gi|356572848|ref|XP_003554577.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 467
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/264 (39%), Positives = 145/264 (54%), Gaps = 52/264 (19%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W+ + N TL +TR HLVELMNS+ +LI SNLTF NSP TIHPVYC V+ + +L+P
Sbjct: 166 WNRFMNRTLDYTRPHLVELMNSTGVLI-SNLTFLNSPFWTIHPVYCSQVTVQNVRILAPH 224
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DP DCYI +G+ L+A+KSGWD GIA RPS+NI + R+ G T
Sbjct: 225 DSPNTDGIDPDSSDNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSTNIIIHRLVGKTQ 284
Query: 114 TCSGVGIGREMSG----------------------------------RIFNVTVNHLDVW 139
T SG+ IG EMSG + NV++ ++D+
Sbjct: 285 T-SGIAIGSEMSGGVSEVHAEDIQFYDSYNGIRIKTSPGRGGYVRNIYVSNVSLANVDIA 343
Query: 140 MQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEIC 199
+ GSY + HP + +DP A+P I ++ +VV N A ++ GI G F IC
Sbjct: 344 IWFTGSYGE------HPDDAYDPNALPVIEKVTIKDVVGENIKTAGLIEGIEGDNFVNIC 397
Query: 200 MKNVSLLVQAPSVKWQCRFVSGFN 223
+ N+ L V + + W C +V G++
Sbjct: 398 LSNIILNVTS-NYPWNCSYVKGYS 420
>gi|357442057|ref|XP_003591306.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355480354|gb|AES61557.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 601
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 147/260 (56%), Gaps = 44/260 (16%)
Query: 5 LWW----NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+WW N TL HTR HLVEL+NS+ +L ISN TF NSP TIHPVYC N V+ +T++
Sbjct: 294 IWWSKFRNKTLDHTRPHLVELINSTEVL-ISNATFLNSPFWTIHPVYCSNVTVQNVTIIV 352
Query: 61 PLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P +PNTDG+DP DCYI +G+ L+++KSGWD GI+ RPS+NI++ R++G
Sbjct: 353 PFGSPNTDGIDPDSSDNVCIEDCYISTGDDLISIKSGWDEYGISFGRPSTNISIHRLTGR 412
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLR---------- 151
T T +G+ IG EMSG + V + ++ + +G Y +
Sbjct: 413 T-TSAGIAIGSEMSGGVSEVYAEDIYIFDSKSAIRIKTSPGRGGYVRNVYISNMTLINVD 471
Query: 152 -------LYG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
LYG HP + +D A+P I I+ VNV+ N +A ++ GI G F +IC+ N+
Sbjct: 472 IAIRFTGLYGEHPDDSYDRDALPVIERITVVNVIGENIKRAGLIQGIKGDNFVDICLSNI 531
Query: 204 SLLVQAPSVKWQCRFVSGFN 223
+L V + W C V G++
Sbjct: 532 TLNVSKNN-PWNCSDVKGYS 550
>gi|449452247|ref|XP_004143871.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
gi|449501789|ref|XP_004161459.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 445
Score = 172 bits (436), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 102/258 (39%), Positives = 144/258 (55%), Gaps = 41/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W++W TLK+TR LVE +NS NI IISN+ F NSP IHPVYCRN V+ +T+L+P
Sbjct: 164 WNMWRTGTLKYTRPSLVEFVNSYNI-IISNVMFLNSPFWNIHPVYCRNVVVRYVTILAPR 222
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DP D YI +G+ LVAVKSGWD GIA R S +I +RR+SG++P
Sbjct: 223 DSPNTDGVDPDSSNNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRCSYDITIRRISGSSP 282
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG------------------------SYKDR 149
+GV +G E SG + NV HL+ + G + +
Sbjct: 283 -FAGVAVGSEASGGVANVLAEHLNFYDMGVGINIKTNIGRGGFIKNITVSNVYMENSRKG 341
Query: 150 LRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
L++ G HP + +DP A+P + I+ N+ VN +A + G+ + F IC+ N++L
Sbjct: 342 LKIAGDAGDHPDDKFDPNALPIVKDITIKNIWGVNVQQAGSIYGLRDSPFTGICLSNINL 401
Query: 206 --LVQAPSVKWQCRFVSG 221
+ SV W C +VSG
Sbjct: 402 RGATRPRSVPWTCSYVSG 419
>gi|222636745|gb|EEE66877.1| hypothetical protein OsJ_23693 [Oryza sativa Japonica Group]
Length = 506
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/261 (39%), Positives = 141/261 (54%), Gaps = 43/261 (16%)
Query: 4 DLWWN----STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
+LWWN TL +TR L+ELM S + +ISNLTF N+P IHPVYC V+ +T+L
Sbjct: 193 ELWWNWFHNHTLNYTRPPLLELMYSDRV-VISNLTFMNAPFWNIHPVYCSQVLVQHLTIL 251
Query: 60 SPLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P+S+PNTDG+DP DCYI +G+ +V +KSGWD GI+ A PSSNI++R ++G
Sbjct: 252 APISSPNTDGIDPDSSSNVCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITG 311
Query: 111 TTPTCSGVGIGREMSGRIFNVTVNHLDV----------WMQQQGSYKDRLRL-------- 152
T +G+ G EMSG I +V L +G Y + +
Sbjct: 312 QTRNSAGIAFGSEMSGGISDVRAEGLRFINSVHGIRIKTAPGRGGYVKNIYIADVSMDNV 371
Query: 153 ---------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN 202
YG HP + +D A+P IS I+ NVV VN A +L GI G F IC+ N
Sbjct: 372 SIAIRITGNYGEHPDDNYDKNALPVISNITIKNVVGVNIGTAGMLLGIQGDIFSNICLSN 431
Query: 203 VSLLVQAPSVKWQCRFVSGFN 223
VSL ++ W C + GF+
Sbjct: 432 VSLSSKSAD-PWNCSLIEGFS 451
>gi|115471367|ref|NP_001059282.1| Os07g0245200 [Oryza sativa Japonica Group]
gi|34393209|dbj|BAC82923.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113610818|dbj|BAF21196.1| Os07g0245200 [Oryza sativa Japonica Group]
Length = 446
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/261 (39%), Positives = 141/261 (54%), Gaps = 43/261 (16%)
Query: 4 DLWWN----STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
+LWWN TL +TR L+ELM S + +ISNLTF N+P IHPVYC V+ +T+L
Sbjct: 133 ELWWNWFHNHTLNYTRPPLLELMYSDRV-VISNLTFMNAPFWNIHPVYCSQVLVQHLTIL 191
Query: 60 SPLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P+S+PNTDG+DP DCYI +G+ +V +KSGWD GI+ A PSSNI++R ++G
Sbjct: 192 APISSPNTDGIDPDSSSNVCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITG 251
Query: 111 TTPTCSGVGIGREMSGRIFNVTVNHLDV----------WMQQQGSYKDRLRL-------- 152
T +G+ G EMSG I +V L +G Y + +
Sbjct: 252 QTRNSAGIAFGSEMSGGISDVRAEGLRFINSVHGIRIKTAPGRGGYVKNIYIADVSMDNV 311
Query: 153 ---------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN 202
YG HP + +D A+P IS I+ NVV VN A +L GI G F IC+ N
Sbjct: 312 SIAIRITGNYGEHPDDNYDKNALPVISNITIKNVVGVNIGTAGMLLGIQGDIFSNICLSN 371
Query: 203 VSLLVQAPSVKWQCRFVSGFN 223
VSL ++ W C + GF+
Sbjct: 372 VSLSSKSAD-PWNCSLIEGFS 391
>gi|224032157|gb|ACN35154.1| unknown [Zea mays]
Length = 430
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 143/260 (55%), Gaps = 43/260 (16%)
Query: 5 LWW----NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+WW N TL +TR HLVELM S+N+ +ISNLTF NSP IHPVYC V+ +T+L+
Sbjct: 164 IWWGWFHNHTLNYTRPHLVELMYSTNV-VISNLTFKNSPFWNIHPVYCSQVLVRHVTILA 222
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
PL++PNTDG+ PD CY+ +G ++ +KSGWD GI+ A+PSSNI++ ++G
Sbjct: 223 PLNSPNTDGVTPDSSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGE 282
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDV----------WMQQQGSYKDRLRL--------- 152
T SG+ G EMSG I V L + +G Y + + +
Sbjct: 283 TRGGSGIAFGSEMSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVS 342
Query: 153 --------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
YG HP + +D A+P IS I+ +VV VN A +L GI G F IC+ NV
Sbjct: 343 MAIRITGNYGEHPDDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNV 402
Query: 204 SLLVQAPSVKWQCRFVSGFN 223
SL VQ+ W C + G++
Sbjct: 403 SLSVQSAH-PWNCSLIEGYS 421
>gi|226504332|ref|NP_001141464.1| uncharacterized protein LOC100273574 precursor [Zea mays]
gi|194704686|gb|ACF86427.1| unknown [Zea mays]
gi|223949711|gb|ACN28939.1| unknown [Zea mays]
gi|413950643|gb|AFW83292.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
gi|413950644|gb|AFW83293.1| hypothetical protein ZEAMMB73_881856 [Zea mays]
Length = 446
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/256 (37%), Positives = 141/256 (55%), Gaps = 39/256 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD+W N TL +TR HL+ELM+SS+I I+SN+ F +SP IHPVYC N ++ +T+L+P
Sbjct: 167 WDMWKNRTLLYTRPHLLELMSSSDI-IVSNVVFQDSPFWNIHPVYCSNVVIRNVTILAPH 225
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DPD CYI +G+ +A+KSGWD GIA R SS I VRR++G++P
Sbjct: 226 DSPNTDGIDPDSSSNICIEDCYISTGDDSIAIKSGWDEYGIAYGRASSGITVRRITGSSP 285
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSY------------------------KDR 149
+G +G E SG + NV HL+ + G + +
Sbjct: 286 -FAGFAVGSETSGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVRYG 344
Query: 150 LRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
LR+ G HP + ++ A+P + ++ NV N +A ++ GI + F IC+ NV
Sbjct: 345 LRIVGDVGNHPDDSYNRSALPIVDALTVKNVQGQNVREAGLIKGIPNSAFSRICLSNVKF 404
Query: 206 LVQAPSVKWQCRFVSG 221
AP W+C VSG
Sbjct: 405 TGGAPVRPWKCEAVSG 420
>gi|223948047|gb|ACN28107.1| unknown [Zea mays]
gi|414873755|tpg|DAA52312.1| TPA: polygalacturonase isoform 1 [Zea mays]
gi|414873756|tpg|DAA52313.1| TPA: polygalacturonase isoform 2 [Zea mays]
Length = 477
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 143/260 (55%), Gaps = 43/260 (16%)
Query: 5 LWW----NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+WW N TL +TR HLVELM S+N+ +ISNLTF NSP IHPVYC V+ +T+L+
Sbjct: 164 IWWGWFHNHTLNYTRPHLVELMYSTNV-VISNLTFKNSPFWNIHPVYCSQVLVRHVTILA 222
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
PL++PNTDG+ PD CY+ +G ++ +KSGWD GI+ A+PSSNI++ ++G
Sbjct: 223 PLNSPNTDGVTPDSSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGE 282
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDV----------WMQQQGSYKDRLRL--------- 152
T SG+ G EMSG I V L + +G Y + + +
Sbjct: 283 TRGGSGIAFGSEMSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVS 342
Query: 153 --------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
YG HP + +D A+P IS I+ +VV VN A +L GI G F IC+ NV
Sbjct: 343 MAIRITGNYGEHPDDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNV 402
Query: 204 SLLVQAPSVKWQCRFVSGFN 223
SL VQ+ W C + G++
Sbjct: 403 SLSVQSAH-PWNCSLIEGYS 421
>gi|226497942|ref|NP_001151479.1| polygalacturonase precursor [Zea mays]
gi|195647062|gb|ACG42999.1| polygalacturonase [Zea mays]
Length = 477
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 143/260 (55%), Gaps = 43/260 (16%)
Query: 5 LWW----NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+WW N TL +TR HLVELM S+N+ +ISNLTF NSP IHPVYC V+ +T+L+
Sbjct: 164 IWWGWFHNHTLNYTRPHLVELMYSTNV-VISNLTFKNSPFWNIHPVYCSQVLVQHVTILA 222
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
PL++PNTDG+ PD CY+ +G ++ +KSGWD GI+ A+PSSNI++ ++G
Sbjct: 223 PLNSPNTDGVTPDSSTNVCINHCYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGE 282
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDV----------WMQQQGSYKDRLRL--------- 152
T SG+ G EMSG I V L + +G Y + + +
Sbjct: 283 TRGGSGIAFGSEMSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVS 342
Query: 153 --------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
YG HP + +D A+P IS I+ +VV VN A +L GI G F IC+ NV
Sbjct: 343 MAIRITGNYGEHPDDKYDSTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNV 402
Query: 204 SLLVQAPSVKWQCRFVSGFN 223
SL VQ+ W C + G++
Sbjct: 403 SLSVQSAH-PWNCSLIEGYS 421
>gi|168058134|ref|XP_001781065.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667462|gb|EDQ54091.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 446
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/256 (38%), Positives = 142/256 (55%), Gaps = 38/256 (14%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W+ + N TL +TRGHLVEL++S +ILI SNLTF +SP TIHPVYCRN VK MT+L+PL
Sbjct: 172 WNAFQNKTLDYTRGHLVELIDSKDILI-SNLTFRDSPFWTIHPVYCRNVVVKDMTLLAPL 230
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
++PNTDG+DP DCYI G+ +A+KSGWD G A PS +I +RR+ +
Sbjct: 231 NSPNTDGIDPDSSQYVCIEDCYISVGDDAIAIKSGWDEYGTAYGMPSQHIDIRRIVVHSE 290
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRL----------- 152
T +G+ G EMSG I +V V+H+ ++ + +G Y + +
Sbjct: 291 TSAGIAFGSEMSGGISDVKVDHMMIFGARWGIRFKTGPGRGGYIRNITVDNVNMRSVNTA 350
Query: 153 ------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
YG HP E W+ P I + N+V + T A + G+ + F I + N++L
Sbjct: 351 IAFTGNYGEHPDENWNRTDYPVIENVLIENIVGEDITHAGLFLGLPESPFLNIHLANIAL 410
Query: 206 LVQAPSVKWQCRFVSG 221
++ S W C V+G
Sbjct: 411 DTKSESEDWNCSSVAG 426
>gi|242043478|ref|XP_002459610.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
gi|241922987|gb|EER96131.1| hypothetical protein SORBIDRAFT_02g007470 [Sorghum bicolor]
Length = 499
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/258 (39%), Positives = 143/258 (55%), Gaps = 39/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + N TL +TR LVELM S+ + +ISNLTF NSP IHPVYC + +T+L+P+
Sbjct: 183 WDWFHNHTLNYTRPPLVELMYSTRV-VISNLTFINSPFWNIHPVYCSQVLAQHLTILAPI 241
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
S+PNTDG+DPD CYI +G+ +V +KSGWD GI+ A PSSNI++R ++G T
Sbjct: 242 SSPNTDGIDPDSSTNVCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTR 301
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG---------------------SYKD---R 149
+G+ G EMSG I +V + + G S+ +
Sbjct: 302 NSAGLAFGSEMSGGISDVRAEGIRIVNSVHGIRIKTAPGRGGYVKNVYVADVSFDNVSIA 361
Query: 150 LRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
+R+ G HP + ++ A+P IS I+ +VV VN A +L GI G F IC+ NVSL
Sbjct: 362 IRITGNYGEHPDDRYNKSALPTISNITIKDVVGVNIGVAGMLQGIPGDNFSNICLSNVSL 421
Query: 206 LVQAPSVKWQCRFVSGFN 223
V++ W C V G++
Sbjct: 422 SVRSTD-PWNCSLVEGYS 438
>gi|218199365|gb|EEC81792.1| hypothetical protein OsI_25505 [Oryza sativa Indica Group]
Length = 506
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/261 (39%), Positives = 140/261 (53%), Gaps = 43/261 (16%)
Query: 4 DLWWN----STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
+LWWN TL +TR L+ELM S + +ISNLTF N+P IHPVYC V+ +T+L
Sbjct: 193 ELWWNWFHNHTLNYTRPPLLELMYSDRV-VISNLTFMNAPFWNIHPVYCSQVLVQHLTIL 251
Query: 60 SPLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P+S+PNTDG+DP DCYI +G+ +V +KSGWD GI+ A PSSNI++R ++G
Sbjct: 252 APISSPNTDGIDPDSSSNVCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITG 311
Query: 111 TTPTCSGVGIGREMSGRIFNVTVNHLDV----------WMQQQGSYKDRLRL-------- 152
T +G+ G EMSG I +V L +G Y + +
Sbjct: 312 QTRNSAGIAFGSEMSGGISDVRAEGLRFINSVHGIRIKTAPGRGGYVKNIYIADVSMDNV 371
Query: 153 ---------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN 202
YG HP + +D +P IS I+ NVV VN A +L GI G F IC+ N
Sbjct: 372 SIAIRITGNYGEHPDDNYDKNVLPVISNITIKNVVGVNIGTAGMLLGIQGDIFSNICLSN 431
Query: 203 VSLLVQAPSVKWQCRFVSGFN 223
VSL ++ W C V GF+
Sbjct: 432 VSLSSKSAD-PWNCSLVKGFS 451
>gi|242032389|ref|XP_002463589.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
gi|241917443|gb|EER90587.1| hypothetical protein SORBIDRAFT_01g002550 [Sorghum bicolor]
Length = 459
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 148/266 (55%), Gaps = 55/266 (20%)
Query: 5 LWW----NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+WW N TL +TR HLVELM S+N+ +ISNLTF NSP IHPVYC V+ +T+L+
Sbjct: 148 IWWGWFRNHTLNYTRPHLVELMYSTNV-VISNLTFKNSPFWNIHPVYCSQVLVQHVTILA 206
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
PL++PNTDG+ PD CY+ +G+ ++ +KSGWD GI+ A+PSSNI++ ++G
Sbjct: 207 PLNSPNTDGVSPDSSTNVCINHCYVRNGDDVIVIKSGWDEYGISFAQPSSNISISDITGE 266
Query: 112 TPTCSGVGIGREMSG----------RIFN------------------------VTVNHLD 137
T +G+ G EMSG RI N V+++++
Sbjct: 267 TRGGAGIAFGSEMSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVKNVYIADVSMDNVS 326
Query: 138 VWMQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEE 197
+ ++ G+Y + HP + +D A+P IS I+ +VV VN A +L GI G F
Sbjct: 327 MAIRITGNYGE------HPDDKYDRTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSN 380
Query: 198 ICMKNVSLLVQAPSVKWQCRFVSGFN 223
IC+ NVSL VQ+ W C + G++
Sbjct: 381 ICLSNVSLSVQSAH-PWNCSLIEGYS 405
>gi|186701252|gb|ACC91278.1| glycoside hydrolase family 28 protein [Capsella rubella]
Length = 494
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 100/259 (38%), Positives = 144/259 (55%), Gaps = 40/259 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + LK+TR +L+E+M+S I ISNLTF NSPS IHPVY RN F++G+T+L+P+
Sbjct: 190 WGKFKRGELKYTRPYLIEIMHSDGIQ-ISNLTFLNSPSWHIHPVYSRNIFIQGLTILAPV 248
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+ PNTDG++P DCYI SG+ +AVKSGWD GIA P+ + +RR++ +P
Sbjct: 249 TVPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGIAYGMPTKQLLIRRLTCISP 308
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRLYG--------- 154
+ + +G EMSG I +V + + +G Y + + G
Sbjct: 309 DSAVIALGSEMSGGIEDVRAEDIVAIDSESGIRIKTAIGRGGYVKDVYVRGMTMKTMKYV 368
Query: 155 ---------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
HP E +DPKA+P I I++ ++V+ N T LAGI G QF IC+ NV++
Sbjct: 369 FWMTGSYGSHPDEHYDPKALPVIQNINYQDMVAENVTMPAQLAGISGDQFTGICISNVTI 428
Query: 206 -LVQAP-SVKWQCRFVSGF 222
L + P V W C VSG+
Sbjct: 429 TLSKKPKKVLWNCTDVSGY 447
>gi|357111082|ref|XP_003557344.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 479
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/261 (38%), Positives = 142/261 (54%), Gaps = 43/261 (16%)
Query: 4 DLWWN----STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
++WWN TL +TR LVE M S+ + ++SNLTF NSP IHPVYC V+ +T+L
Sbjct: 164 EIWWNWFHNHTLNYTRPPLVEFMYSTRV-VVSNLTFTNSPFWNIHPVYCSQVLVQHLTIL 222
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P+S+PNTDG+DPD CYI +G+ +V +KSGWD GI+ A PSSNI+++ ++G
Sbjct: 223 APISSPNTDGIDPDSSTNVCIEDCYIRNGDDIVVIKSGWDEYGISFAYPSSNISIQNITG 282
Query: 111 TTPTCSGVGIGREMSGRIFNV------TVNHL---------------------DVWMQQQ 143
T + +G+ +G EMSG I NV VN + DV M
Sbjct: 283 QTRSSAGIALGSEMSGGISNVRAVGIRIVNSVHGIRIKTAPGRGGYVKNVYIADVSMDNV 342
Query: 144 GSYKDRLRLYG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN 202
YG HP + +D A+P IS I+ NV+ N A +L GI G F IC+ N
Sbjct: 343 SIAIRITANYGEHPDDKYDKNALPIISNITIKNVIGANIGVAGMLQGIQGDSFSNICLSN 402
Query: 203 VSLLVQAPSVKWQCRFVSGFN 223
V+L ++ W C V G++
Sbjct: 403 VTLSTKSMD-PWNCSLVEGYS 422
>gi|388499792|gb|AFK37962.1| unknown [Lotus japonicus]
Length = 469
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 144/263 (54%), Gaps = 44/263 (16%)
Query: 4 DLWW----NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
DLWW N L++TR +L+E+M S N+ I SNLT NSPS IHPVYC N V+G+T+L
Sbjct: 163 DLWWKKFHNKQLQYTRPYLIEIMYSDNVQI-SNLTLVNSPSWNIHPVYCSNVIVQGITIL 221
Query: 60 SPLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P+++PNTDG++P DCYI SG+ VAVKSGWD GI+ P+ ++ +RR++
Sbjct: 222 APVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISYGMPTKHLVIRRLTC 281
Query: 111 TTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGS---------------YKDRLRL--- 152
+PT + + +G EMSG I +V + + G Y R+ +
Sbjct: 282 ISPTSAVIALGSEMSGGIEDVRAEDILAINSESGVRIKTAVGRGGYVRDIYVRRMTMKTM 341
Query: 153 ---------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN 202
YG H +DP AIP I I++ ++V+ N T A L GI G F IC+ N
Sbjct: 342 KWVFWMTGDYGSHADNNYDPNAIPVIENINYRDMVAENVTMAARLEGISGAPFTGICISN 401
Query: 203 VS--LLVQAPSVKWQCRFVSGFN 223
V+ L +A V W C VSG +
Sbjct: 402 VTIELAKKAKKVPWTCTDVSGIS 424
>gi|388512935|gb|AFK44529.1| unknown [Lotus japonicus]
Length = 469
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 144/263 (54%), Gaps = 44/263 (16%)
Query: 4 DLWW----NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
DLWW N L++TR +L+E+M S N+ I SNLT NSPS IHPVYC N V+G+T+L
Sbjct: 163 DLWWKKFHNKQLQYTRPYLIEIMYSDNVQI-SNLTLVNSPSWNIHPVYCSNVIVQGITIL 221
Query: 60 SPLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P+++PNTDG++P DCYI SG+ VAVKSGWD GI+ P+ ++ +RR++
Sbjct: 222 APVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISYGMPTKHLVIRRLTC 281
Query: 111 TTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGS---------------YKDRLRL--- 152
+PT + + +G EMSG I +V + + G Y R+ +
Sbjct: 282 ISPTSAVIALGSEMSGGIEDVRAEDILAINSESGVRIKTAVGRGGYVRDIYVRRMTMKTM 341
Query: 153 ---------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN 202
YG H +DP AIP I I++ ++V+ N T A L GI G F IC+ N
Sbjct: 342 KWVFWMTGDYGSHADNNYDPNAIPVIENINYRDMVAENVTMAARLGGISGAPFTGICISN 401
Query: 203 VS--LLVQAPSVKWQCRFVSGFN 223
V+ L +A V W C VSG +
Sbjct: 402 VTIELAKKAKKVPWTCTDVSGIS 424
>gi|224071986|ref|XP_002303605.1| predicted protein [Populus trichocarpa]
gi|222841037|gb|EEE78584.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/265 (37%), Positives = 140/265 (52%), Gaps = 44/265 (16%)
Query: 4 DLWWNS----TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
+LWW L HTR +L+E+M S+NI ISNLT NSPS +HPVYC N V+G+T+L
Sbjct: 164 ELWWTKFRAGELNHTRPYLIEIMFSTNIQ-ISNLTLINSPSWNVHPVYCSNVVVQGLTIL 222
Query: 60 SPLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P+ +PNTDG++P DCYI SG+ VAVKSGWD GIA P+ + +RR++
Sbjct: 223 APVRSPNTDGINPDSCTNTKIQDCYIVSGDDCVAVKSGWDEYGIAFGMPTKQVVIRRLTC 282
Query: 111 TTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRLYG------ 154
+PT + + +G EMSG I +V + + +G Y + + G
Sbjct: 283 ISPTSAVIALGSEMSGGIEDVRAEDITAIDSESGVRIKTAVGRGGYVKDIYVRGMTLKTM 342
Query: 155 ------------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN 202
HP +DP AIP I I++ +VV+ N T A L GI G F IC+ N
Sbjct: 343 KWVFWMTGNYGSHPDNNYDPNAIPVIQNINYRDVVAENVTMAARLEGIAGDPFTGICISN 402
Query: 203 VS--LLVQAPSVKWQCRFVSGFNGQ 225
V+ L ++W C V+G +
Sbjct: 403 VTIGLARNRKKLQWNCSDVAGITSE 427
>gi|255541678|ref|XP_002511903.1| polygalacturonase, putative [Ricinus communis]
gi|223549083|gb|EEF50572.1| polygalacturonase, putative [Ricinus communis]
Length = 472
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 140/252 (55%), Gaps = 35/252 (13%)
Query: 5 LWWNS----TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
WW LK+TR +L+E+M S NI ISNLT NSPS +HPVY N ++G+T+++
Sbjct: 175 FWWQQFKKGKLKYTRPYLIEIMYSDNIQ-ISNLTLLNSPSWNVHPVYSSNILIQGITIIA 233
Query: 61 PLSAPNTDGLDPDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGI 120
P+++PNTDG++PDCYI SG+ VAVKSGWD GIA P+ + +RR++ +P + + +
Sbjct: 234 PVTSPNTDGINPDCYIISGDDCVAVKSGWDEYGIAFGMPTKQLVIRRLTCISPYSATIAL 293
Query: 121 GREMSGRIFNVTVNHLDVWMQQQGS---------------YKDRLRL------------Y 153
G EMSG I +V + + G Y R+ + Y
Sbjct: 294 GSEMSGGIQDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWAFWMTGNY 353
Query: 154 G-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS--LLVQAP 210
G H + +DP A+P I GI++ ++V+ N + A L GI G F++IC+ NV+ + +A
Sbjct: 354 GSHADKNYDPNALPVIEGINYRDMVADNVSMAARLEGISGDPFKQICISNVTIGMAAKAK 413
Query: 211 SVKWQCRFVSGF 222
+ W C + G
Sbjct: 414 KIPWTCTDIEGI 425
>gi|224151097|ref|XP_002337059.1| predicted protein [Populus trichocarpa]
gi|222837934|gb|EEE76299.1| predicted protein [Populus trichocarpa]
Length = 356
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/265 (37%), Positives = 140/265 (52%), Gaps = 44/265 (16%)
Query: 4 DLWWNS----TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
+LWW L HTR +L+E+M S+NI ISNLT NSPS +HPVYC N V+G+T+L
Sbjct: 50 ELWWTKFRAGELNHTRPYLIEIMFSTNIQ-ISNLTLINSPSWNVHPVYCSNVVVQGLTIL 108
Query: 60 SPLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P+ +PNTDG++P DCYI SG+ VAVKSGWD GIA P+ + +RR++
Sbjct: 109 APVRSPNTDGINPDSCTNTKIQDCYIVSGDDCVAVKSGWDEYGIAFGMPTKQVVIRRLTC 168
Query: 111 TTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRLYG------ 154
+PT + + +G EMSG I +V + + +G Y + + G
Sbjct: 169 ISPTSAVIALGSEMSGGIEDVRAEDITAIDSESGVRIKTAVGRGGYVKDIYVRGMTLKTM 228
Query: 155 ------------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN 202
HP +DP AIP I I++ +VV+ N T A L GI G F IC+ N
Sbjct: 229 KWVFWMTGNYGSHPDNNYDPNAIPVIQNINYRDVVAENVTMAARLEGIAGDPFTGICISN 288
Query: 203 VS--LLVQAPSVKWQCRFVSGFNGQ 225
V+ L ++W C V+G +
Sbjct: 289 VTIGLARNRKKLQWNCSDVAGITSE 313
>gi|115456423|ref|NP_001051812.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|40714685|gb|AAR88591.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|108711938|gb|ABF99733.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|108711939|gb|ABF99734.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113550283|dbj|BAF13726.1| Os03g0833800 [Oryza sativa Japonica Group]
gi|215694675|dbj|BAG89866.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 476
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/258 (39%), Positives = 144/258 (55%), Gaps = 39/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + ++TL +TR HLVELM S+++ +ISNLTF NSP IHPVYC V+ +T+L+PL
Sbjct: 166 WDWFHSNTLNYTRPHLVELMYSTDV-VISNLTFKNSPFWNIHPVYCSQVLVQHVTILAPL 224
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
++PNTDG+DPD CY+ +G+ ++ +KSGWD GI+ ARPS+NI++ ++G T
Sbjct: 225 NSPNTDGIDPDSSTNVCIDHCYVRNGDDVIVIKSGWDEYGISFARPSTNISISNITGETR 284
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG------------------------SYKDR 149
+G+ G EMSG I V L + G +
Sbjct: 285 GGAGIAFGSEMSGGISEVRAEGLRIVNSMHGIRIKTAPGRGGYVKNVYISDVSMDNVSMA 344
Query: 150 LRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
+R+ G HP + +D A+P IS I+ NVV VN A +L GI G F IC+ NVSL
Sbjct: 345 IRITGNFGEHPDDKYDRNALPMISNITIENVVGVNVGVAGILEGIEGDNFSSICLSNVSL 404
Query: 206 LVQAPSVKWQCRFVSGFN 223
VQ+ W C + G++
Sbjct: 405 SVQSMH-PWNCSLIEGYS 421
>gi|108711940|gb|ABF99735.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|218194041|gb|EEC76468.1| hypothetical protein OsI_14200 [Oryza sativa Indica Group]
gi|222626115|gb|EEE60247.1| hypothetical protein OsJ_13254 [Oryza sativa Japonica Group]
Length = 460
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/258 (39%), Positives = 144/258 (55%), Gaps = 39/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + ++TL +TR HLVELM S+++ +ISNLTF NSP IHPVYC V+ +T+L+PL
Sbjct: 150 WDWFHSNTLNYTRPHLVELMYSTDV-VISNLTFKNSPFWNIHPVYCSQVLVQHVTILAPL 208
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
++PNTDG+DPD CY+ +G+ ++ +KSGWD GI+ ARPS+NI++ ++G T
Sbjct: 209 NSPNTDGIDPDSSTNVCIDHCYVRNGDDVIVIKSGWDEYGISFARPSTNISISNITGETR 268
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG------------------------SYKDR 149
+G+ G EMSG I V L + G +
Sbjct: 269 GGAGIAFGSEMSGGISEVRAEGLRIVNSMHGIRIKTAPGRGGYVKNVYISDVSMDNVSMA 328
Query: 150 LRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
+R+ G HP + +D A+P IS I+ NVV VN A +L GI G F IC+ NVSL
Sbjct: 329 IRITGNFGEHPDDKYDRNALPMISNITIENVVGVNVGVAGILEGIEGDNFSSICLSNVSL 388
Query: 206 LVQAPSVKWQCRFVSGFN 223
VQ+ W C + G++
Sbjct: 389 SVQSMH-PWNCSLIEGYS 405
>gi|4490311|emb|CAB38802.1| putative protein [Arabidopsis thaliana]
gi|7270292|emb|CAB80061.1| putative protein [Arabidopsis thaliana]
Length = 462
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 134/230 (58%), Gaps = 41/230 (17%)
Query: 21 LMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDCYIESGN 80
L+NS ++I S+LT S + G ++L ++ +T+ DCYIESG+
Sbjct: 221 LLNSRTLIISSSLTSLCSI------------LLSGQSILF-IADSSTNVCIEDCYIESGD 267
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNHLDVWM 140
LVAVKSGWD G+A+ARPSSNI +RR+SGTT TCSGVGIG EMSG IFN+TV + VW
Sbjct: 268 DLVAVKSGWDQYGMAVARPSSNIVIRRISGTTRTCSGVGIGSEMSGGIFNITVEDIHVWD 327
Query: 141 QQQG------------------------SYKDRLRLYG----HPKEGWDPKAIPKISGIS 172
G K +R H + WDPKA+P++ GI
Sbjct: 328 SAAGLRIKTDKGRGGYISNITFNNVLLEKVKVPIRFSSGSNDHSDDKWDPKALPRVKGIY 387
Query: 173 FVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLVQAPSVKWQCRFVSGF 222
NVVS+N+ KAP+L G+ GT F+++C++NV+LL + KW+C+ VSG+
Sbjct: 388 ISNVVSLNSRKAPMLLGVEGTSFQDVCLRNVTLLGLPKTEKWKCKDVSGY 437
>gi|15236625|ref|NP_194113.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|4454051|emb|CAA23048.1| putative polygalacturonase [Arabidopsis thaliana]
gi|7269231|emb|CAB81300.1| putative polygalacturonase [Arabidopsis thaliana]
gi|17065242|gb|AAL32775.1| putative polygalacturonase [Arabidopsis thaliana]
gi|22136230|gb|AAM91193.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332659410|gb|AEE84810.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 444
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/257 (38%), Positives = 142/257 (55%), Gaps = 40/257 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W++W + TLK+TR +L+E +S I IISN+ F NSP IHPVYC N + +T+L+P
Sbjct: 164 WNMWRSRTLKYTRPNLIEFKDSKEI-IISNVIFQNSPFWNIHPVYCSNVVIHHVTILAPQ 222
Query: 63 SAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DPD YI +G+ LVA+KSGWD GIA RPSSNI +RR++G++P
Sbjct: 223 DSPNTDGIDPDSSYNVCIEDSYISTGDDLVAIKSGWDQYGIAYGRPSSNITIRRITGSSP 282
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRL---------YG 154
+G+ IG E SG I N+ H+ + +G Y +++ YG
Sbjct: 283 -FAGIAIGSETSGGIKNIIAEHITLSNMGVGVNIKTNIGRGGYIKNIKISDVYVDTAKYG 341
Query: 155 ---------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
HP E ++P A+P + GI NV VN A + G+ G+ F IC+ ++L
Sbjct: 342 IKIAGDTGDHPDENYNPNALPVVKGIHIKNVWGVNVRNAGSIQGLKGSPFTGICLSEINL 401
Query: 206 LVQAPSVK-WQCRFVSG 221
S K W+C VSG
Sbjct: 402 HGSLNSYKTWKCSDVSG 418
>gi|48475087|gb|AAT44156.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 474
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/256 (37%), Positives = 139/256 (54%), Gaps = 39/256 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD+W TL TR HL+EL++S+++ IISN+ F +SP IHPVYC N + +TVL+P
Sbjct: 197 WDMWRKRTLPFTRPHLLELISSTDV-IISNVVFQDSPFWNIHPVYCSNVVITNVTVLAPH 255
Query: 63 SAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DPD YI +G+ L+++KSGWD GIA RPSS I +RR++G+ P
Sbjct: 256 DSPNTDGIDPDSSSNVCIEDSYISTGDDLISIKSGWDEYGIAFGRPSSGITIRRITGSGP 315
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSY------------------------KDR 149
+G +G E SG + NV V HL+ + G + +
Sbjct: 316 -FAGFAVGSETSGGVENVHVEHLNFFGMGVGIHVKTNSGRGGFIRNITVSEVTLNGARYG 374
Query: 150 LRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
LR+ G HP +DP +P + G++ NV N +A ++ GI + F IC+ NV L
Sbjct: 375 LRIAGDVGGHPDASYDPSKLPVVDGVTIKNVWGQNIRQAGLVRGIRDSVFSRICLSNVKL 434
Query: 206 LVQAPSVKWQCRFVSG 221
W+CR VSG
Sbjct: 435 YGGDSVGPWKCRAVSG 450
>gi|115465733|ref|NP_001056466.1| Os05g0587000 [Oryza sativa Japonica Group]
gi|113580017|dbj|BAF18380.1| Os05g0587000 [Oryza sativa Japonica Group]
gi|125568884|gb|EAZ10399.1| hypothetical protein OsJ_00232 [Oryza sativa Japonica Group]
Length = 448
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/256 (37%), Positives = 139/256 (54%), Gaps = 39/256 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD+W TL TR HL+EL++S+++ IISN+ F +SP IHPVYC N + +TVL+P
Sbjct: 171 WDMWRKRTLPFTRPHLLELISSTDV-IISNVVFQDSPFWNIHPVYCSNVVITNVTVLAPH 229
Query: 63 SAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DPD YI +G+ L+++KSGWD GIA RPSS I +RR++G+ P
Sbjct: 230 DSPNTDGIDPDSSSNVCIEDSYISTGDDLISIKSGWDEYGIAFGRPSSGITIRRITGSGP 289
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSY------------------------KDR 149
+G +G E SG + NV V HL+ + G + +
Sbjct: 290 -FAGFAVGSETSGGVENVHVEHLNFFGMGVGIHVKTNSGRGGFIRNITVSEVTLNGARYG 348
Query: 150 LRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
LR+ G HP +DP +P + G++ NV N +A ++ GI + F IC+ NV L
Sbjct: 349 LRIAGDVGGHPDASYDPSKLPVVDGVTIKNVWGQNIRQAGLVRGIRDSVFSRICLSNVKL 408
Query: 206 LVQAPSVKWQCRFVSG 221
W+CR VSG
Sbjct: 409 YGGDSVGPWKCRAVSG 424
>gi|125553514|gb|EAY99223.1| hypothetical protein OsI_21181 [Oryza sativa Indica Group]
Length = 448
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/256 (37%), Positives = 139/256 (54%), Gaps = 39/256 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD+W TL TR HL+EL++S+++ IISN+ F +SP IHPVYC N + +TVL+P
Sbjct: 171 WDMWRKRTLPFTRPHLLELISSTDV-IISNVVFQDSPFWNIHPVYCSNVVITNVTVLAPH 229
Query: 63 SAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DPD YI +G+ L+++KSGWD GIA RPSS I +RR++G+ P
Sbjct: 230 DSPNTDGIDPDSSSNVCIEDSYISTGDDLISIKSGWDEYGIAFGRPSSGITIRRITGSGP 289
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSY------------------------KDR 149
+G +G E SG + NV V HL+ + G + +
Sbjct: 290 -FAGFAVGSETSGGVENVHVEHLNFFGMGVGIHVKTNSGRGGFIRNITVSEVTLNGARYG 348
Query: 150 LRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
LR+ G HP +DP +P + G++ NV N +A ++ GI + F IC+ NV L
Sbjct: 349 LRIAGDVGGHPDASYDPSKLPVVDGVTIKNVWGQNIRQAGLVRGIRDSVFSRICLSNVKL 408
Query: 206 LVQAPSVKWQCRFVSG 221
W+CR VSG
Sbjct: 409 YGGDSVGPWKCRAVSG 424
>gi|326490848|dbj|BAJ90091.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 143/261 (54%), Gaps = 40/261 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + + LK+TRG+L+ELM++ + I SN+T NSP+ IHPVY RN V G+T+L+P+
Sbjct: 173 WSKYKSGKLKYTRGYLIELMHTDGVFI-SNVTLVNSPAWNIHPVYSRNIVVSGVTILAPV 231
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG++PD CY+ SG+ VA+KSGWD GIA+ PS +I+VRR++ +P
Sbjct: 232 KSPNTDGINPDSCSQVRIEDCYVVSGDDCVAIKSGWDEYGIAVGMPSEHISVRRLTCVSP 291
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG---------------SYKDRLRLYG---- 154
T + + +G EMSG I +V + + Y R+RL G
Sbjct: 292 TSAVIALGSEMSGGIRDVRAEDITAIGTESAVRIKTAVGRGAYVRDVYARRMRLDGMKRV 351
Query: 155 ---------HPKEGWDPKAIPKISGISFVNVVSVNTTK-APVLAGIIGTQFEEICMKNVS 204
HP +G+D A+P + IS+ +VV+ K A + GI G F+ ICM NV+
Sbjct: 352 FWMTGDYKSHPDDGYDKAAVPVVENISYQDVVATGVWKEAARMQGIQGAPFKGICMANVT 411
Query: 205 L-LVQAPSVKWQCRFVSGFNG 224
+ + + V W C V G +
Sbjct: 412 MEMTKERKVSWNCADVEGVSA 432
>gi|297816104|ref|XP_002875935.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321773|gb|EFH52194.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 469
Score = 166 bits (420), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 98/258 (37%), Positives = 149/258 (57%), Gaps = 40/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + K TR +L+EL+ S NI I SN+T +SPS IHPVYC N VK +TVL+P+
Sbjct: 169 WDKFKKKQFKLTRPYLIELLFSKNIQI-SNITLIDSPSWNIHPVYCNNVIVKSVTVLAPV 227
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+ PNTDG++PD CYI SG+ +AVKSGWD GI P+ +++RR++ +P
Sbjct: 228 TVPNTDGINPDSCTNTLIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTQQLSIRRLTCISP 287
Query: 114 TCSGVGIGREMSG-----RIFNVTVNHLDVWMQ-----QQGSY-KD----RLRLY----- 153
+GV +G EMSG RI +VT+ + + ++ +G+Y KD R+ +
Sbjct: 288 KSAGVALGSEMSGGIKDVRIEDVTLTNTESAIRIKTAAGRGAYVKDIFARRITMKTMKYV 347
Query: 154 --------GHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
HP EG+DPKA+P+++ I++ ++ + N T + L GI F IC+ NV++
Sbjct: 348 FWMSGNYNSHPDEGFDPKALPEVTNINYRDMTAENVTMSASLDGIHKDPFTGICISNVTI 407
Query: 206 LV--QAPSVKWQCRFVSG 221
+ +A V+W C V+G
Sbjct: 408 ALADKAKKVQWNCTDVAG 425
>gi|357118995|ref|XP_003561232.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 512
Score = 166 bits (420), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 98/260 (37%), Positives = 147/260 (56%), Gaps = 40/260 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + + LK+TRG+L+ELM SS+ + ISN+T NSP+ IHPVY +N ++G+T+L+P
Sbjct: 198 WSKYKSGKLKYTRGYLIELM-SSDTIFISNVTLLNSPAWNIHPVYSKNIVIQGVTILAPT 256
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG++PD CY+ SG+ VA+KSGWD GIA P+ ++ VRR++ +P
Sbjct: 257 RSPNTDGINPDSCSQVRIEDCYVVSGDDCVAIKSGWDEYGIAAGIPTEHVIVRRLTCVSP 316
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSY-KD----RLRLYG---- 154
T + V IG EMSG + +V + + + +G+Y KD R+ L G
Sbjct: 317 TSALVAIGSEMSGGVRDVRIEDVAAVDTESAVRIKTAVGRGAYVKDIYARRMTLTGMKRV 376
Query: 155 ---------HPKEGWDPKAIPKISGISFVNVVSVNTTK-APVLAGIIGTQFEEICMKNVS 204
HP +G+D A+P + G+SF +V + K A + GI G F+ ICM NV+
Sbjct: 377 FWMTGDYKSHPDDGYDKTAVPVVEGVSFQDVAATGVWKEAARMEGISGAPFKGICMANVT 436
Query: 205 LLVQAP-SVKWQCRFVSGFN 223
+ + P V W C V G +
Sbjct: 437 MEMTKPRKVMWNCADVEGVS 456
>gi|356567484|ref|XP_003551949.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 442
Score = 166 bits (419), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 146/262 (55%), Gaps = 41/262 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W++W TL+ TR +LVE +NS +I IISN+ F NSP IHPVYC N V+ +T+L+P
Sbjct: 164 WNMWRQRTLQFTRPNLVEFVNSQDI-IISNVIFKNSPFWNIHPVYCSNVVVRYVTILAPR 222
Query: 63 SAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DPD YI +G+ LVAVKSGWD GIA RPS I +RRV+G++P
Sbjct: 223 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSYGITIRRVTGSSP 282
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG--------------------SYKDRLR-- 151
+G+ IG E SG + NV H++++ G Y + R
Sbjct: 283 -FAGIAIGSETSGGVENVLAEHINLFNMGVGIHIKTNSGRGGLIKNITVAHVYVENARQG 341
Query: 152 ------LYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
+ GHP E ++P A+P + GI+ NV V +A ++ G+ + F ++C+ +++
Sbjct: 342 IKIAGDVGGHPDEKFNPNALPVVKGITIKNVWGVKVNQAGLIHGLRNSPFTDVCLSDINF 401
Query: 206 L-VQAP-SVKWQCRFVSGFNGQ 225
++ P S W+C V GF Q
Sbjct: 402 HGMEGPRSPSWKCSDVFGFAHQ 423
>gi|356524183|ref|XP_003530711.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 474
Score = 166 bits (419), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 146/262 (55%), Gaps = 41/262 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W++W TL+ TR +LVE +NS +I IISN+ F NSP IHPVYC N V+ +T+L+P
Sbjct: 196 WNMWRQRTLQFTRPNLVEFVNSQDI-IISNVIFKNSPFWNIHPVYCSNVVVRYVTILAPR 254
Query: 63 SAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DPD YI +G+ LVAVKSGWD GIA RPS I +RR++G++P
Sbjct: 255 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSYGITIRRLTGSSP 314
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG--------------------SYKDRLR-- 151
+G+ IG E SG + NV H++++ G Y + R
Sbjct: 315 -FAGIAIGSETSGGVENVLAEHINLFNMGVGIHIKTNSGRGGLIKNITVAHVYVENARQG 373
Query: 152 ------LYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
+ GHP E ++P A+P + GI+ NV V +A ++ G+ + F ++C+ N++
Sbjct: 374 IKIAGDVGGHPDEKFNPNALPVVKGITIKNVWGVRVNQAGLIHGLRNSPFTDVCLSNINF 433
Query: 206 L-VQAP-SVKWQCRFVSGFNGQ 225
++ P S W+C V GF Q
Sbjct: 434 HGMRGPRSPSWKCSDVFGFAHQ 455
>gi|186701223|gb|ACC91250.1| glycoside hydrolase family 28 protein [Arabidopsis halleri]
Length = 444
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/257 (38%), Positives = 141/257 (54%), Gaps = 40/257 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W++W + TLK+TR +L+E +S I IISN+ F NSP IHPVYC N + +T+L+P
Sbjct: 164 WNMWHSRTLKYTRPNLIEFKDSKEI-IISNVIFQNSPFWNIHPVYCSNVVIHHVTILAPQ 222
Query: 63 SAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DPD YI +G+ LVA+KSGWD GIA RPSSNI +RR++G++P
Sbjct: 223 DSPNTDGIDPDSSYNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSNITIRRITGSSP 282
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRL---------YG 154
+G+ IG E SG I N+ H+ + +G Y +++ YG
Sbjct: 283 -FAGIAIGSETSGGIKNIVAEHITLSNMGVGVNIKTNIGRGGYIKNIKISDVYIDTAKYG 341
Query: 155 ---------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
HP E ++P A+P + GI NV VN A + G+ G+ F IC+ ++L
Sbjct: 342 IKITGDTGDHPDENYNPNALPIVKGIHIKNVWGVNVRNAGSIQGLKGSPFTGICLSEINL 401
Query: 206 LVQAPSVK-WQCRFVSG 221
S K W+C V G
Sbjct: 402 HGSLNSYKTWKCSDVIG 418
>gi|255537567|ref|XP_002509850.1| polygalacturonase, putative [Ricinus communis]
gi|223549749|gb|EEF51237.1| polygalacturonase, putative [Ricinus communis]
Length = 480
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/263 (37%), Positives = 144/263 (54%), Gaps = 44/263 (16%)
Query: 4 DLWW----NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
DLWW N + +TR +L+E+M S+NI ISNLT NSPS IHP Y N V+G+T+L
Sbjct: 173 DLWWKKFHNGEINYTRPYLIEIMYSNNIQ-ISNLTLMNSPSWNIHPTYSSNVVVQGITIL 231
Query: 60 SPLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P+++PNTDG++P DCYI SG+ VAVKSGWD GI+ P+ + +RR++
Sbjct: 232 APVNSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLVIRRLTC 291
Query: 111 TTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGS---------------YKDRLRL--- 152
+PT + + +G EMSG I +V + + G Y ++ +
Sbjct: 292 ISPTSAAIALGSEMSGGIQDVRAEDITCINTESGVRIKTSVGRGGYVKDIYVRKMTMHTM 351
Query: 153 ---------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN 202
YG HP +DP AIP I I++ ++V+ N T A L GI G F IC+ N
Sbjct: 352 KWVFWMTGNYGSHPDNNYDPNAIPVIENINYRDIVAENVTMAARLEGIAGDPFTGICISN 411
Query: 203 VSL-LVQAP-SVKWQCRFVSGFN 223
V++ L Q P ++W C ++G +
Sbjct: 412 VTIGLAQKPKKLQWNCTDIAGIS 434
>gi|297799608|ref|XP_002867688.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313524|gb|EFH43947.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 444
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/257 (38%), Positives = 141/257 (54%), Gaps = 40/257 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W++W + TLK+TR +L+E +S I IISN+ F NSP IHPVYC N + +T+L+P
Sbjct: 164 WNMWRSRTLKYTRPNLIEFKDSKEI-IISNVIFQNSPFWNIHPVYCSNVVIHHVTILAPQ 222
Query: 63 SAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DPD YI +G+ LVA+KSGWD GIA RPSSNI +RR++G++P
Sbjct: 223 DSPNTDGIDPDSSYNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSNITIRRITGSSP 282
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRL---------YG 154
+G+ IG E SG I N+ H+ + +G Y +++ YG
Sbjct: 283 -FAGIAIGSETSGGIKNIVAEHITLSNMGVGVNIKTNIGRGGYIKNIKISDVYIDTAKYG 341
Query: 155 ---------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
HP E ++P A+P + GI NV VN A + G+ G+ F IC+ ++L
Sbjct: 342 IKIAGDTGDHPDENYNPNALPIVKGIHIKNVWGVNVRNAGSIQGLKGSPFTGICLSEINL 401
Query: 206 LVQAPSVK-WQCRFVSG 221
S K W+C V G
Sbjct: 402 HGSLNSYKTWKCSDVIG 418
>gi|242091535|ref|XP_002441600.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
gi|241946885|gb|EES20030.1| hypothetical protein SORBIDRAFT_09g030140 [Sorghum bicolor]
Length = 439
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/256 (36%), Positives = 140/256 (54%), Gaps = 39/256 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD+W TL TR HL+ELM S+++ ++SN+ F +SP IHPVYC N + +TVL+P
Sbjct: 162 WDMWKKRTLPFTRPHLLELMYSTDV-VVSNVVFQDSPFWNIHPVYCSNVVIANVTVLAPH 220
Query: 63 SAPNTDGLD---------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+D D YI +G+ L+++KSGWD GIA RPSS I +RR++G+ P
Sbjct: 221 DSPNTDGIDLDSSSNVCIEDSYISAGDDLISIKSGWDEYGIAFGRPSSGITIRRITGSGP 280
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSY------------------------KDR 149
+G +G E SG + NV V HL+++ G + +
Sbjct: 281 -FAGFAVGSETSGGVENVLVEHLNLFGMGVGIHIKTNSGRGGFIRNITVSEVTLNGARYG 339
Query: 150 LRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
LR+ G HP ++P +P ++ ++ NV+ N +A ++ GI + F IC+ NV L
Sbjct: 340 LRIAGDVGGHPDASYNPSVLPVVNSVTIKNVLGQNIRQAGLIRGIRNSVFSNICLSNVKL 399
Query: 206 LVQAPSVKWQCRFVSG 221
A W+CR VSG
Sbjct: 400 YGSASIGPWKCRAVSG 415
>gi|297803786|ref|XP_002869777.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315613|gb|EFH46036.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 494
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/259 (37%), Positives = 142/259 (54%), Gaps = 40/259 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + LK+TR +L+E+M+S I ISNLTF NSPS IHPVY RN F++ +T+L+P+
Sbjct: 190 WGKFKRGELKYTRPYLIEIMHSDGIQ-ISNLTFLNSPSWHIHPVYSRNIFIQSLTILAPV 248
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+ PNTDG++P DCYI SG+ +AVKSGWD GI P+ + +RR++ +P
Sbjct: 249 TVPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGINYGMPTKQLLIRRLTCISP 308
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRLYG--------- 154
+ + +G EMSG I +V + + +G Y + + G
Sbjct: 309 DSAVIALGSEMSGGIEDVRAEDIVAINSESGIRIKTAIGRGGYVKDVYVRGMTMNTMKYV 368
Query: 155 ---------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
HP E +DPKA+P I I++ ++V+ N T LAGI G QF IC+ NV++
Sbjct: 369 FWMTGSYGSHPDEHYDPKALPVIQNINYQDMVAENVTMPAQLAGISGDQFTGICISNVTI 428
Query: 206 -LVQAP-SVKWQCRFVSGF 222
L + P V W C VSG+
Sbjct: 429 TLSKKPKKVLWNCTDVSGY 447
>gi|15229058|ref|NP_190464.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|6522571|emb|CAB62015.1| endo-polygalacturonase-like protein [Arabidopsis thaliana]
gi|67633678|gb|AAY78763.1| glycoside hydrolase family 28 protein [Arabidopsis thaliana]
gi|332644955|gb|AEE78476.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 469
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/258 (37%), Positives = 147/258 (56%), Gaps = 40/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + K TR +L+E++ S NI I SN+T +SPS IHPVYC + VK +TVL+P+
Sbjct: 169 WDKFKKKQFKITRPYLIEILFSKNIQI-SNITLIDSPSWNIHPVYCNSVIVKSVTVLAPV 227
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+ PNTDG++PD CYI SG+ +AVKSGWD GI P+ +++RR++ +P
Sbjct: 228 TVPNTDGINPDSCTNTLIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTQQLSIRRLTCISP 287
Query: 114 TCSGVGIGREMSG-----RIFNVTVNHLDVWMQQQGS----------YKDRLRL------ 152
+GV +G EMSG RI +VT+ + + ++ + + Y R+ +
Sbjct: 288 KSAGVALGSEMSGGIKDVRIEDVTLTNTESAIRIKTAVGRGAYVKDIYARRITMKTMKYV 347
Query: 153 ------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV-- 203
YG HP EG+DPKA+P+I+ I++ ++ + N T + L GI F IC+ NV
Sbjct: 348 FWMSGNYGSHPDEGFDPKALPEITNINYRDMTAENVTMSASLDGIDKDPFTGICISNVTI 407
Query: 204 SLLVQAPSVKWQCRFVSG 221
+L +A ++W C V+G
Sbjct: 408 ALAAKAKKMQWNCTDVAG 425
>gi|224058441|ref|XP_002299511.1| predicted protein [Populus trichocarpa]
gi|222846769|gb|EEE84316.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/265 (36%), Positives = 141/265 (53%), Gaps = 44/265 (16%)
Query: 4 DLWWNS----TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
+LWW L +TR +L+E+M S+NI ISNLT NSPS +HPVYC N V+G+T+L
Sbjct: 173 ELWWTKFRAGELNYTRPYLIEIMFSTNIQ-ISNLTLINSPSWNVHPVYCSNVVVQGLTIL 231
Query: 60 SPLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P+ +PNTDG++P DCYI SG+ VAVKSGWD GI+ P+ + +RR++
Sbjct: 232 APVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLVIRRLTC 291
Query: 111 TTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRLYG------ 154
+PT + + +G EMSG I +V + + +G Y + + G
Sbjct: 292 ISPTSAVIALGSEMSGGIEDVRAEDITAIDSESGVRIKTAVGRGGYVKDIYVRGMTLKTM 351
Query: 155 ------------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN 202
HP +DP AIP I I++ +VV+ N T A L GI G F IC+ N
Sbjct: 352 KWVFWMTGNYGSHPDNNYDPNAIPVIQNINYRDVVAENVTMAAKLEGIAGDPFTGICISN 411
Query: 203 VS--LLVQAPSVKWQCRFVSGFNGQ 225
V+ L + ++W C V+G +
Sbjct: 412 VTIGLAQNSKKLQWNCTDVAGITSE 436
>gi|356535839|ref|XP_003536450.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 140/258 (54%), Gaps = 40/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + + L TR +++E+M S I I SNLT NSPS +HP+Y N +KG+T+L+P+
Sbjct: 176 WDKFHKNQLNLTRPYMIEIMYSDQIQI-SNLTLVNSPSWFVHPIYSSNITIKGLTILAPV 234
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DP DCYI SG+ VAVKSGWD GI +P+ ++ +RR++ +P
Sbjct: 235 DSPNTDGIDPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISP 294
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRLYG--------- 154
+ + +G EMSG I +V V + Q +G Y + + G
Sbjct: 295 DSAMIALGSEMSGGIQDVRVEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMTLSTMKYV 354
Query: 155 ---------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
HP +DPKA+P I+GI++ +VV+ N T + L GI F IC+ NVS+
Sbjct: 355 FWMTGSYGSHPDPAFDPKALPNITGINYRDVVATNVTYSAKLEGISNDPFTGICISNVSI 414
Query: 206 LV--QAPSVKWQCRFVSG 221
V Q ++W C V+G
Sbjct: 415 QVSEQKKKLQWNCTDVAG 432
>gi|359490611|ref|XP_002273143.2| PREDICTED: probable polygalacturonase-like, partial [Vitis
vinifera]
Length = 432
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/262 (37%), Positives = 139/262 (53%), Gaps = 40/262 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + L TR +L+E+M S + I SNLT +SPS +HPVYC + ++GMT+L+P+
Sbjct: 128 WDKFKQKKLVDTRPYLIEIMFSDQVQI-SNLTLIDSPSWNVHPVYCSDVIIQGMTILAPV 186
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
PNTDG++P DCYI SG+ +AVKSGWD GI P+ +I +RR++ +P
Sbjct: 187 DVPNTDGINPDSCANVKIEDCYIVSGDDCIAVKSGWDQYGIKYGVPTRDIVIRRLTCISP 246
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQGS---------------YKDRLRL------ 152
+ + +G EMSG I NV + Q G Y ++ +
Sbjct: 247 DSAVIALGSEMSGGIKNVRAEDITAINSQSGVRIKTGVGRGGYVQDIYARKMTMKTMKYV 306
Query: 153 ------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
YG HP + WD KAIPKI I++ VV+ N T + L GI G +F IC+ +V++
Sbjct: 307 FWMTSDYGSHPDDEWDRKAIPKIENINYREVVAENVTYSARLDGIAGDKFTGICISDVTI 366
Query: 206 -LVQAP-SVKWQCRFVSGFNGQ 225
L Q P ++W C V G Q
Sbjct: 367 RLTQKPKQLQWNCTNVEGVTSQ 388
>gi|356534105|ref|XP_003535598.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 475
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 140/258 (54%), Gaps = 40/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + + L TR +++E+M S I I SNLT NSPS +HP+Y N +KG+T+L+P+
Sbjct: 175 WDKFHKNQLNLTRPYMIEIMYSDQIQI-SNLTLVNSPSWFVHPIYSSNITIKGLTILAPV 233
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DP DCYI SG+ VAVKSGWD GI +P+ ++ +RR++ +P
Sbjct: 234 DSPNTDGIDPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCISP 293
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRLYG--------- 154
+ + +G EMSG I +V V + Q +G Y + + G
Sbjct: 294 DSAMIALGSEMSGGIQDVRVEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMTLSTMKYV 353
Query: 155 ---------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
HP +DPKA+P I+GI++ +VV+ N T + L GI F IC+ NVS+
Sbjct: 354 FWMTGSYGSHPDPAFDPKALPNITGINYRDVVATNVTYSAKLEGISNDPFTGICISNVSI 413
Query: 206 LV--QAPSVKWQCRFVSG 221
V Q ++W C V+G
Sbjct: 414 QVSEQKKKLQWNCTDVAG 431
>gi|356554060|ref|XP_003545367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 446
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 147/262 (56%), Gaps = 41/262 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W+ W TL+ TR +LVE +NS +I IISN+ F NSP IHPVYC N V+ +T+L+P
Sbjct: 166 WNKWRQGTLQFTRPNLVEFVNSRDI-IISNVIFKNSPFWNIHPVYCSNVVVRYVTILAPR 224
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DP D YI +G+ LVAVKSGWD GIA RPSS+I +RR++G++P
Sbjct: 225 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSDITIRRITGSSP 284
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSY------------------------KDR 149
+G+ IG E SG + NV H++++ G + +
Sbjct: 285 -FAGIAIGSETSGGVENVLAEHINLYNMGIGIHIKTNTGRGGFIKNITMSHVYMEEARKG 343
Query: 150 LRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
+R+ G HP + +D A+P + G++ NV + +A ++ G+ + F +IC+ +++L
Sbjct: 344 IRISGDVGDHPDDKFDANALPLVKGVTIKNVWGMKVLQAGLIQGLRNSPFTDICLYDINL 403
Query: 206 L-VQAPSV-KWQCRFVSGFNGQ 225
V P W+C VSGF Q
Sbjct: 404 HGVTGPRTPPWKCSDVSGFAHQ 425
>gi|224064057|ref|XP_002301370.1| predicted protein [Populus trichocarpa]
gi|222843096|gb|EEE80643.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/261 (37%), Positives = 141/261 (54%), Gaps = 44/261 (16%)
Query: 5 LWWNS----TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
WW + LK+TR +L+E+M S I ISNLT NSPS +HPVY R+ V+G+T+++
Sbjct: 164 FWWQNFHKGKLKYTRPYLIEIMFSDTIQ-ISNLTLLNSPSWNVHPVYSRDILVQGITIIA 222
Query: 61 PLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P+S+PNTDG++P DCYI SG+ VAVKSGWD GIA P+ + +RR++
Sbjct: 223 PISSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIAFGMPTKQLVIRRLTCI 282
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGS---------------YKDRLRL---- 152
+P + + +G EMSG I +V + + G Y R+ +
Sbjct: 283 SPYSATIALGSEMSGGIEDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMK 342
Query: 153 --------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
YG H + +DP A+P I GI++ ++V+ N T A L GI G F+EIC+ NV
Sbjct: 343 WVFWMTGNYGSHADKNYDPNALPLIQGINYRDMVADNVTMAARLEGIAGDPFKEICISNV 402
Query: 204 S--LLVQAPSVKWQCRFVSGF 222
+ L +A V W C + G
Sbjct: 403 TIGLAPKAKKVPWTCTEIEGM 423
>gi|125538851|gb|EAY85246.1| hypothetical protein OsI_06620 [Oryza sativa Indica Group]
Length = 443
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/256 (38%), Positives = 135/256 (52%), Gaps = 39/256 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W++W TL+HTR +L+E M+SS I I SN+ NSP IHPVYC N + M +++P
Sbjct: 166 WNMWRQRTLQHTRPNLLEFMHSSGIHI-SNIVLKNSPFWNIHPVYCDNVVITNMMIIAPH 224
Query: 63 SAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DPD YI +G+ LVA+KSGWD GIA RPSS I +RRV G++P
Sbjct: 225 DSPNTDGVDPDSSTNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRRVRGSSP 284
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG------------------------SYKDR 149
SG+ IG E SG + +V V ++ G S ++
Sbjct: 285 -FSGIAIGSEASGGVSDVLVEDCSIFNSGYGIHIKTNIGRGGFIRNITVDNVRMNSVRNG 343
Query: 150 LRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
LR+ G HP E + A+P + G+S NV VN + + GI + F IC+ NV L
Sbjct: 344 LRIAGDVGDHPDEHFSQLALPTVDGVSIKNVWGVNVQQPGSIEGIRNSPFTRICLANVKL 403
Query: 206 LVQAPSVKWQCRFVSG 221
+ W+CR V G
Sbjct: 404 FGWRNNAAWKCRDVHG 419
>gi|168006626|ref|XP_001756010.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692940|gb|EDQ79295.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 423
Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 141/259 (54%), Gaps = 41/259 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + N TL ++R H++EL+ S +ILI NLTF NSPS TIHPVYC+N +K +TVL+P
Sbjct: 146 WKAFRNKTLDYSRSHVLELIGSQDILIF-NLTFQNSPSWTIHPVYCKNVVIKNLTVLNPN 204
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DP DCYI G+ +++KSGWD GI+ PS +I +RR+ +
Sbjct: 205 DSPNTDGIDPDSSQHVCIEDCYISVGDDAISIKSGWDQYGISYGMPSKHIQIRRIVSASK 264
Query: 114 TC---SGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRL-------- 152
T +GV G EMSG I NV V+ + ++ + +G Y + +
Sbjct: 265 TFGIHAGVSFGSEMSGGISNVKVDDMVLYGARWGVRFKTSPGRGGYIKHVAVHNLLLHSV 324
Query: 153 ---------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN 202
YG HP + W+ A P I I N+V N T+A +L G+ + F I +K
Sbjct: 325 KTAVAFMANYGQHPDDNWNRTAYPVIENIVIKNIVGENITQAGILQGLPESPFRHIHLKT 384
Query: 203 VSLLVQAPSVKWQCRFVSG 221
++L V++ W C +VSG
Sbjct: 385 IALDVRSTKNVWNCSWVSG 403
>gi|168053514|ref|XP_001779181.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669440|gb|EDQ56027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 96/258 (37%), Positives = 138/258 (53%), Gaps = 42/258 (16%)
Query: 5 LWWNS----TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+WW++ TL +TRGH++EL+ S NILI SNLTF NSP TIHPVYC+N VK +T+L+
Sbjct: 126 VWWSAFRKKTLNYTRGHMLELIESKNILI-SNLTFKNSPFWTIHPVYCKNVVVKSLTILN 184
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P APNTDG+DPD CYI G+ +++KSGWD G + A PS +I V+R+
Sbjct: 185 PFDAPNTDGIDPDSSQHVCIEDCYISVGDDAISIKSGWDQFGTSFAMPSKHIKVQRILAF 244
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG------------------------SYK 147
+ + +G+ G EMSG I +V V+ + V + G S +
Sbjct: 245 SRSSAGISFGSEMSGGISDVKVDGMVVTGARWGVRIKTAVGRGGYVRGISVKNIVLHSIR 304
Query: 148 DRLRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
+ + G HP E W+ A P I I N+V N +A + G+ + F +I + N+
Sbjct: 305 TAIAVMGNYGEHPDENWNRTAYPLIEDIRMKNIVGENINQAGLFLGLQESPFRDIHLANI 364
Query: 204 SLLVQAPSVKWQCRFVSG 221
+L V W C V+G
Sbjct: 365 ALQVNTTKQIWNCSDVAG 382
>gi|115445377|ref|NP_001046468.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|50251675|dbj|BAD29699.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|50252020|dbj|BAD27952.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113535999|dbj|BAF08382.1| Os02g0256100 [Oryza sativa Japonica Group]
gi|215686497|dbj|BAG87758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765347|dbj|BAG87044.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622550|gb|EEE56682.1| hypothetical protein OsJ_06128 [Oryza sativa Japonica Group]
Length = 443
Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 98/256 (38%), Positives = 134/256 (52%), Gaps = 39/256 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W++W TL+HTR +L+E M+SS I I SN+ NSP IHPVYC N + M +++P
Sbjct: 166 WNMWRQRTLQHTRPNLLEFMHSSGIHI-SNIVLKNSPFWNIHPVYCDNVVITNMMIIAPH 224
Query: 63 SAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DPD YI +G+ LVA+KSGWD GIA RPSS I +RRV G++P
Sbjct: 225 DSPNTDGVDPDSSTNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRRVRGSSP 284
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG------------------------SYKDR 149
SG+ IG E SG + NV V ++ G S ++
Sbjct: 285 -FSGIAIGSEASGGVSNVLVEDCSIFNSGYGIHIKTNIGRGGFIRNITVDNVRMNSVRNG 343
Query: 150 LRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
LR+ G HP E + A+P + +S NV VN + + GI + F IC+ NV L
Sbjct: 344 LRIAGDVGDHPDEHFSQLALPTVDAVSIKNVWGVNVQQPGSIEGIRNSPFTRICLANVKL 403
Query: 206 LVQAPSVKWQCRFVSG 221
+ W+CR V G
Sbjct: 404 FGWRNNAAWKCRDVHG 419
>gi|15236514|ref|NP_194081.1| putative polygalacturonase [Arabidopsis thaliana]
gi|3451075|emb|CAA20471.1| putative protein [Arabidopsis thaliana]
gi|7269198|emb|CAB79305.1| putative protein [Arabidopsis thaliana]
gi|23296346|gb|AAN13048.1| unknown protein [Arabidopsis thaliana]
gi|62320484|dbj|BAD95012.1| hypothetical protein [Arabidopsis thaliana]
gi|332659368|gb|AEE84768.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 495
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/259 (37%), Positives = 142/259 (54%), Gaps = 40/259 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + LK+TR +L+E+M+S I ISNLTF NSPS IHPVY N +++G+T+L+P+
Sbjct: 191 WGKFKRGELKYTRPYLIEIMHSDGIQ-ISNLTFLNSPSWHIHPVYSSNIYIQGLTILAPV 249
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+ PNTDG++P DCYI SG+ +AVKSGWD GI P+ + +RR++ +P
Sbjct: 250 TVPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGINYGMPTKQLLIRRLTCISP 309
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRLYG--------- 154
+ + +G EMSG I +V + + +G Y + + G
Sbjct: 310 DSAVIALGSEMSGGIEDVRAEDIVAINSESGIRIKTAIGRGGYVKDVYVRGMTMMTMKYV 369
Query: 155 ---------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
HP + +DPKA+P I I++ ++V+ N T LAGI G QF IC+ NV++
Sbjct: 370 FWMTGSYGSHPDDHYDPKALPVIQNINYQDMVAENVTMPAQLAGISGDQFTGICISNVTI 429
Query: 206 -LVQAP-SVKWQCRFVSGF 222
L + P V W C VSG+
Sbjct: 430 TLSKKPKKVLWNCTDVSGY 448
>gi|326501406|dbj|BAK02492.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/258 (38%), Positives = 144/258 (55%), Gaps = 40/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + L +TRG+L+EL+ S +I IISN+TF ++PS +HP YC N + G+T+L+P+
Sbjct: 83 WDKFHAKELDYTRGYLLELLYSRDI-IISNVTFVDAPSWNLHPTYCTNVTISGVTILAPV 141
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DPD CYI SG+ +AVKSGWD GI PS +I VRR++ +P
Sbjct: 142 HSPNTDGIDPDSSSHVKIEDCYIVSGDDCIAVKSGWDEYGIRFNMPSQHIVVRRLTCISP 201
Query: 114 TCSGVGIGREMSGRIFNVTVN-----------HLDVWMQQQGSYKD----RLRL------ 152
T + + +G EMSG I +V V + + + G +D RL L
Sbjct: 202 TSAMIALGSEMSGGIQDVRVEDNIAINTESAVRIKSGVGRGGFVRDVFVRRLSLHTMKWV 261
Query: 153 ------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS- 204
YG HP DPKA+P+++GI++ +V + N T A + GI + ICM NV+
Sbjct: 262 FWMTGNYGQHPDNSSDPKALPEVTGINYRDVFAENVTMAGRMEGIPNDPYTGICMSNVTA 321
Query: 205 -LLVQAPSVKWQCRFVSG 221
L +A ++W C V G
Sbjct: 322 QLAPKAKKLQWNCTDVQG 339
>gi|449456478|ref|XP_004145976.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 480
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/262 (34%), Positives = 143/262 (54%), Gaps = 44/262 (16%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + L TR +L+E+M S I I S+LT NSPS +HP+Y +N ++G+T+L+P+
Sbjct: 177 WDKFHKGELNLTRPYLIEIMYSDQIQI-SDLTLVNSPSWFVHPIYSKNVIIQGLTILAPI 235
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DP DC+I SG+ +AVKSGWD GI P+ ++ ++R++ +P
Sbjct: 236 DSPNTDGIDPDSCSNTRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIKRLTCISP 295
Query: 114 TCSGVGIGREMSGRIFNVTVNHL----------------------DVWMQQQGSYKDRLR 151
+GV +G EMSG I NV + + D+++ +G Y ++
Sbjct: 296 DSAGVALGSEMSGGIRNVRIENFTGINTQSAVRIKTARGRGGFVKDIFV--RGMYLSTMK 353
Query: 152 LY--------GHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
HP + +DP A+P+I+ I++ +VV+ N T + L GI G F IC+ NV
Sbjct: 354 YVFWMTGNYKSHPDDKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNV 413
Query: 204 SL-LVQAP-SVKWQCRFVSGFN 223
+ L P ++W C V GF+
Sbjct: 414 KIGLTATPKKLQWNCTDVEGFS 435
>gi|449497436|ref|XP_004160401.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Cucumis sativus]
Length = 480
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/262 (34%), Positives = 143/262 (54%), Gaps = 44/262 (16%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + L TR +L+E+M S I I S+LT NSPS +HP+Y +N ++G+T+L+P+
Sbjct: 177 WDKFHKGELNLTRPYLIEIMYSDQIQI-SDLTLVNSPSWFVHPIYSKNVIIQGLTILAPI 235
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DP DC+I SG+ +AVKSGWD GI P+ ++ ++R++ +P
Sbjct: 236 DSPNTDGIDPDSCSNTRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIKRLTCISP 295
Query: 114 TCSGVGIGREMSGRIFNVTVNHL----------------------DVWMQQQGSYKDRLR 151
+GV +G EMSG I NV + + D+++ +G Y ++
Sbjct: 296 DSAGVALGSEMSGGIRNVRIENFTGINTQSAVRIKTARGRGGFVKDIFV--RGMYLSTMK 353
Query: 152 LY--------GHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
HP + +DP A+P+I+ I++ +VV+ N T + L GI G F IC+ NV
Sbjct: 354 YVFWMTGNYKSHPDDKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNICISNV 413
Query: 204 SL-LVQAP-SVKWQCRFVSGFN 223
+ L P ++W C V GF+
Sbjct: 414 KIGLTATPKKLQWNCTDVEGFS 435
>gi|358248902|ref|NP_001240215.1| uncharacterized protein LOC100785005 precursor [Glycine max]
gi|255635243|gb|ACU17976.1| unknown [Glycine max]
Length = 477
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 136/256 (53%), Gaps = 38/256 (14%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + LK TR +++E+M S +I I SNLT NSPS +HP+Y + ++G+T+L+P+
Sbjct: 176 WDKFHKGELKLTRPYMIEIMFSDHIQI-SNLTLINSPSWFVHPIYTSDIIIQGLTILAPV 234
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DP DCYI SG+ VA+KSGWD GI PS +I +RR+ +P
Sbjct: 235 DSPNTDGIDPDSCSNIRIEDCYIVSGDDCVAIKSGWDEYGIKFGMPSQHIIIRRLECVSP 294
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRLYG--------- 154
+ + +G EMSG I +V L Q +G+Y + + G
Sbjct: 295 DSAMIALGSEMSGGIQDVRAEDLTAINTQSAVRIKTAVGRGAYVRDIFIKGMNLNTMKYV 354
Query: 155 ---------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
HP G+DPK +P I+GI++ +V++ N T + L GI F IC+ NV++
Sbjct: 355 FWMTGSYSSHPDNGFDPKTLPNITGINYRDVIAENVTYSARLEGIANDPFTGICISNVTI 414
Query: 206 LVQAPSVKWQCRFVSG 221
++W C + G
Sbjct: 415 HSGKKKLQWNCTDIEG 430
>gi|357509171|ref|XP_003624874.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
gi|355499889|gb|AES81092.1| hypothetical protein MTR_7g088550 [Medicago truncatula]
Length = 476
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/261 (37%), Positives = 137/261 (52%), Gaps = 43/261 (16%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + N LK TR +++E++ S I I SNLT NSPS +HP Y N +KG+T+L+P+
Sbjct: 173 WDKFHNKQLKITRPYMIEILYSDQIQI-SNLTLINSPSWFVHPTYSSNIIIKGLTILAPV 231
Query: 63 SAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DPD YI SG+ +A+KSGWD GI +PS I +RR++ +P
Sbjct: 232 DSPNTDGIDPDSSTNVRIEDNYIVSGDDCIAIKSGWDQYGIKFGKPSKQIIIRRLTCISP 291
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRLYG--------- 154
+ + +G EMSG I NV V + + +G Y + + G
Sbjct: 292 DSAMIALGSEMSGGIENVRVEDVTAINTESAVRIKSAVGRGGYVKDIFVKGVKLNTILRY 351
Query: 155 ----------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
HP G+DPKA+PKI+GI F +V++ N T A L GI F IC+ NV+
Sbjct: 352 VFWLTGSYGDHPDNGFDPKALPKITGIIFRDVIAKNVTVAGQLEGISNDPFTGICISNVT 411
Query: 205 LLVQAPSVK----WQCRFVSG 221
+ + K W C VSG
Sbjct: 412 IELSELKKKKKLPWNCTDVSG 432
>gi|302758838|ref|XP_002962842.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
gi|300169703|gb|EFJ36305.1| hypothetical protein SELMODRAFT_78556 [Selaginella moellendorffii]
Length = 439
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 135/259 (52%), Gaps = 42/259 (16%)
Query: 6 WWN----STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
WW L HTRGHLVE ++S+NI IISN+T NSP T+HPVYC N ++G+T+L+P
Sbjct: 153 WWRWSKLGLLNHTRGHLVEFVSSTNI-IISNVTLVNSPFWTLHPVYCTNVLIQGVTILAP 211
Query: 62 LSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
+PNTDG+DPD CYI +G+ ++A+KSGWD GIA +PSSNI +RRV+G T
Sbjct: 212 QDSPNTDGIDPDSSSNVCIQDCYISNGDDMIAIKSGWDEYGIAYGQPSSNIHIRRVTGQT 271
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRLYG-------- 154
+ + IG E SG I NV V L + +G+Y + L
Sbjct: 272 KRGAAIAIGSETSGGIENVLVEDLVAVSTKSGVSIRTGVGRGAYIRNVVLSSITLLDIQT 331
Query: 155 ----------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
HP G++ A P + ++ V + + GI F +IC+++++
Sbjct: 332 AITISGFSSEHPDNGYNATAFPVVEKVTVRGVTGNTLDRPGRILGIPEVPFRDICLEDIA 391
Query: 205 LLVQAPSVKWQCRFVSGFN 223
L W+C V G++
Sbjct: 392 LDASTGLTAWKCTDVEGYS 410
>gi|55295844|dbj|BAD67712.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|125553735|gb|EAY99340.1| hypothetical protein OsI_21311 [Oryza sativa Indica Group]
gi|125595774|gb|EAZ35554.1| hypothetical protein OsJ_19837 [Oryza sativa Japonica Group]
Length = 485
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/262 (36%), Positives = 143/262 (54%), Gaps = 40/262 (15%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
M W + ++ LK+TRG+L+E+M+S + +ISN+T NSP+ IHPVY N V+G+T+L+
Sbjct: 181 MWWSKFHSNKLKYTRGYLIEVMHSDTV-VISNVTLVNSPAWNIHPVYSSNIVVQGVTILA 239
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P +PNTDG++PD CYI SG+ VA+KSGWD GIA PS +I VRR++
Sbjct: 240 PTHSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGIAYGMPSQHIVVRRLTCV 299
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRLYG------- 154
+PT + + +G EMSG I +V + + +G+Y + + G
Sbjct: 300 SPTSAVIALGSEMSGGISDVRAEDITAVNSESAVRIKTAVGRGAYVRDVFVRGMSLDTMK 359
Query: 155 -----------HPKEGWDPKAIPKISGISFVNVVSVNTTK-APVLAGIIGTQFEEICMKN 202
HP +G+DP AIP + IS+ +VV+ K A L GI G F IC+ N
Sbjct: 360 WVFWMTGNYKSHPDDGYDPNAIPVVDNISYQDVVATGVYKEAARLEGIQGAPFRGICIAN 419
Query: 203 VSL-LVQAPSVKWQCRFVSGFN 223
V+ L ++ W C + G +
Sbjct: 420 VTATLSKSRKYPWTCTDIEGVS 441
>gi|357443849|ref|XP_003592202.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
gi|355481250|gb|AES62453.1| hypothetical protein MTR_1g100060 [Medicago truncatula]
Length = 487
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 137/264 (51%), Gaps = 52/264 (19%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + LK TR +++E+M S I I SNLT NSPS +HPVY N + G+T+L+P+
Sbjct: 187 WDKFQKKQLKITRPYMIEIMYSDQIQI-SNLTLVNSPSWFVHPVYSSNIIINGLTILAPV 245
Query: 63 SAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
PNTDG+DPD YI SG+ +A+KSGWD GI + +PS NI VRR++ +P
Sbjct: 246 DVPNTDGIDPDSSTNVLIEDNYIVSGDDCIAIKSGWDEYGIKVGKPSQNIIVRRLTCISP 305
Query: 114 TCSGVGIGREMSG-----RIFNVT-----------------------------VNHLDVW 139
+ V +G EMSG RI +VT +N L
Sbjct: 306 KSALVALGSEMSGGIQDVRIEDVTAINTESAVRIKSAVGRGAFVKDIFVKGMDLNTLKYV 365
Query: 140 MQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEIC 199
GSY D HP G+DP A+PKISGI++ +V + N T A + GI F IC
Sbjct: 366 FWMTGSYGD------HPDNGFDPNALPKISGINYRDVTAKNVTIAGKVEGISNDPFTGIC 419
Query: 200 MKNVSLLVQAPSVK--WQCRFVSG 221
+ NV++ + A K W C +SG
Sbjct: 420 VSNVTIEMSAHKKKLPWNCTDISG 443
>gi|356574519|ref|XP_003555394.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like,
partial [Glycine max]
Length = 305
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/262 (36%), Positives = 142/262 (54%), Gaps = 48/262 (18%)
Query: 6 WWNSTLKH----TRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
WW+ K TR +++E+M S I I SNLT NSPS +HP+Y N +KG+T+L+P
Sbjct: 2 WWDKFDKKQSNLTRPYMIEIMFSDQIQI-SNLTLVNSPSWFVHPIYSSNITIKGLTILAP 60
Query: 62 LSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
+ +PNTDG+DP DCYI SG+ VAVKSGWD GI +P+ ++ +RR++ +
Sbjct: 61 VDSPNTDGIDPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIRRLTCIS 120
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRL-------------------- 152
P + + +G EMSG I +V V + + + Q + + + +
Sbjct: 121 PDSAVIALGSEMSGGIQDVRVEDI-IAISTQSTVRIKTAVGRGAMXYVKDIFVKGMSLST 179
Query: 153 ----------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMK 201
YG HP G+DPKA+P I+GI++ +VV+ N T + L GI F IC+
Sbjct: 180 MKYVFWMTGSYGSHPDAGFDPKALPNITGINYRDVVATNVTYSAKLEGISNAPFTGICIS 239
Query: 202 NVSLLV--QAPSVKWQCRFVSG 221
NVS+ V Q ++W C V+G
Sbjct: 240 NVSIQVSEQRKKLQWNCTDVAG 261
>gi|356528677|ref|XP_003532926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 145/263 (55%), Gaps = 44/263 (16%)
Query: 4 DLWWNS----TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
DLWW LK+TR +LVE+M S N+ ISNLT NSPS +HP+Y N V+G+T+L
Sbjct: 188 DLWWQKFHKGELKYTRPYLVEIMYSDNVQ-ISNLTLVNSPSWNVHPIYSSNVVVQGITIL 246
Query: 60 SPLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P+++PNTDG++P DCYI SG+ VAVKSGWD GIA P+ + +RR++
Sbjct: 247 APVTSPNTDGINPDSCTDTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTC 306
Query: 111 TTPTCSGVGIGREMSGRIFN------VTVN-----HLDVWMQQQGSYKD----RLRL--- 152
+P + + +G EMSG I + V +N + + + G KD R+ +
Sbjct: 307 ISPFSAAIALGSEMSGGIQDMRAEDIVAINTESGVRIKTAVGRGGYVKDIFVRRMTMKTM 366
Query: 153 ---------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN 202
YG H + +DP A+P I I++ ++V+ N T A L GI G F IC+ N
Sbjct: 367 KWAFWMTGNYGSHADDNYDPNALPVIQNINYRDMVAENVTMAARLEGISGDPFTGICISN 426
Query: 203 VS--LLVQAPSVKWQCRFVSGFN 223
V+ L +A V W C ++G +
Sbjct: 427 VTIQLAKKAKKVPWTCTDIAGIS 449
>gi|302815490|ref|XP_002989426.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
gi|300142820|gb|EFJ09517.1| hypothetical protein SELMODRAFT_129742 [Selaginella moellendorffii]
Length = 439
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 135/259 (52%), Gaps = 42/259 (16%)
Query: 6 WWN----STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
WW L HTRGHLVE ++S+NI IISN+T NSP T+HPVYC N ++G+T+L+P
Sbjct: 153 WWRWSKLGLLNHTRGHLVEFVSSTNI-IISNVTLVNSPFWTLHPVYCTNVLIQGVTILAP 211
Query: 62 LSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
+PNTDG+DPD CYI +G+ ++A+KSGWD GIA +PSSNI +RRV+G T
Sbjct: 212 QDSPNTDGIDPDSSSNVCIQDCYISNGDDMIAIKSGWDEYGIAYGQPSSNIHIRRVTGQT 271
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRLYG-------- 154
+ + IG E SG I NV V L + +G+Y + L
Sbjct: 272 KRGAAIAIGSETSGGIENVLVEDLVAVSTKSGISIRTGVGRGAYIRNVVLSSITLLDIQT 331
Query: 155 ----------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
HP G++ A P + ++ V + + GI F +IC+++++
Sbjct: 332 AITISGFSSEHPDNGFNATAFPVVEKVTVRGVTGNTLDRPGRILGIPEVPFRDICLEDIA 391
Query: 205 LLVQAPSVKWQCRFVSGFN 223
L W+C V G++
Sbjct: 392 LDATTGLTAWKCTDVEGYS 410
>gi|449432134|ref|XP_004133855.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 142/263 (53%), Gaps = 42/263 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W L+ LK+TR +L+ELM SS+I I S+LT NSP+ +HPVY N ++G+T+++P+
Sbjct: 189 WQLFHQGKLKYTRPYLIELMYSSDIQI-SSLTLLNSPAWNVHPVYSSNILIQGITIIAPV 247
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG++PD CYI SG+ VAVKSGWD GI+ P+ + VRR++ +P
Sbjct: 248 RSPNTDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGISFGLPTKQLVVRRLTCISP 307
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQGS---------------YKDRLRL------ 152
T + + +G EMSG I +V + + G Y R+ +
Sbjct: 308 TSAVIALGSEMSGGIEDVRAEDIVAIDSESGVRIKTGIGRGGYVKDIYVRRMTMHTMKWA 367
Query: 153 ------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
YG H + +DP A+P I GI++ ++V N T A L GI G F +IC+ NV++
Sbjct: 368 FWMTGDYGSHADKNYDPHALPVIQGINYKDMVVENATMAARLEGISGDTFTDICISNVTI 427
Query: 206 LVQAPSVK---WQCRFVSGFNGQ 225
+ AP K W C + G Q
Sbjct: 428 GL-APKAKKQPWTCTDIEGITSQ 449
>gi|224134791|ref|XP_002327490.1| predicted protein [Populus trichocarpa]
gi|222836044|gb|EEE74465.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 94/262 (35%), Positives = 143/262 (54%), Gaps = 40/262 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + LK TR +L+E + S + I SNLT NSPS +HP YC N ++ +T+L+P+
Sbjct: 155 WDKFHQKKLKLTRPYLIEFLYSDQVQI-SNLTLINSPSWNVHPTYCSNVLIQWLTILAPV 213
Query: 63 SAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG++PD ++ SG+ +AVKSGWD GI RP+ ++ +RR + +P
Sbjct: 214 DSPNTDGINPDSSSNVRIEDSFVVSGDDCIAVKSGWDEYGIKFGRPTQHLVIRRFTCISP 273
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSY-KD----RLRL------ 152
+ + +G EMSG I +V + Q +G+Y KD R+ L
Sbjct: 274 DSATIALGSEMSGGIQDVRAEDITALSTQSGVRIKTAVGRGAYVKDIFVRRMTLKTMKYA 333
Query: 153 ------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
YG HP G+DPKA+P+I GIS+ ++V+ N T + L GI F IC+ NV++
Sbjct: 334 FWMTGSYGSHPDTGYDPKALPEIKGISYKDIVAENVTYSARLEGIENDPFTGICISNVNI 393
Query: 206 -LVQAP-SVKWQCRFVSGFNGQ 225
L Q P ++W C + G + +
Sbjct: 394 SLTQKPKELQWNCTDIQGVSSK 415
>gi|449530307|ref|XP_004172137.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 142/263 (53%), Gaps = 42/263 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W L+ LK+TR +L+ELM SS+I I S+LT NSP+ +HPVY N ++G+T+++P+
Sbjct: 189 WQLFHQGKLKYTRPYLIELMYSSDIQI-SSLTLLNSPAWNVHPVYSSNILIQGITIIAPV 247
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG++PD CYI SG+ VAVKSGWD GI+ P+ + VRR++ +P
Sbjct: 248 RSPNTDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGISFGLPTKQLVVRRLTCISP 307
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQGS---------------YKDRLRL------ 152
T + + +G EMSG I +V + + G Y R+ +
Sbjct: 308 TSAVIALGSEMSGGIEDVRAEDIVAIDSESGVRIKTGIGRGGYVKDIYVRRMTMHTMKWA 367
Query: 153 ------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
YG H + +DP A+P I GI++ ++V N T A L GI G F +IC+ NV++
Sbjct: 368 FWMTGDYGSHADKNYDPHALPVIQGINYKDMVVENATMAARLEGISGDTFTDICISNVTI 427
Query: 206 LVQAPSVK---WQCRFVSGFNGQ 225
+ AP K W C + G Q
Sbjct: 428 GL-APKAKKQPWTCTDIEGITSQ 449
>gi|225464581|ref|XP_002273669.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 478
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 94/262 (35%), Positives = 141/262 (53%), Gaps = 40/262 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + TR +L+E+M S+++ I SNLT +SPS +HPVY RN VK +T+L+P+
Sbjct: 175 WDKFRAKKYNDTRPYLIEIMYSNHVQI-SNLTLIDSPSWNVHPVYSRNVLVKDLTILAPI 233
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG++P DC+I SG+ +AVKSGWD G P+ ++ +RR++ +P
Sbjct: 234 DSPNTDGINPDSCKKVRIEDCFIVSGDDCIAVKSGWDQYGYKFGMPTKDLLIRRLTCISP 293
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG---------------SYKDRLRL------ 152
+ + +G EMSG I NV + Q G Y R+ +
Sbjct: 294 DSATIALGSEMSGGIKNVWAEDITAIDTQSGIRIKTGIGRGGYVKDIYVRRMTVKTMKYV 353
Query: 153 ------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
YG HP +GWDPKA+P I I++ ++V+ N T + L GI G F IC+ NV++
Sbjct: 354 FWITGDYGSHPDDGWDPKALPVIKNINYRDMVAENVTYSARLDGISGDPFTGICISNVTI 413
Query: 206 -LVQAP-SVKWQCRFVSGFNGQ 225
L + P ++W C V+G Q
Sbjct: 414 GLTEKPKELQWNCTNVAGVTSQ 435
>gi|115450425|ref|NP_001048813.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|108705945|gb|ABF93740.1| polygalacturonase, putative, expressed [Oryza sativa Japonica
Group]
gi|113547284|dbj|BAF10727.1| Os03g0124900 [Oryza sativa Japonica Group]
gi|125584758|gb|EAZ25422.1| hypothetical protein OsJ_09236 [Oryza sativa Japonica Group]
Length = 458
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 143/258 (55%), Gaps = 40/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + L +TRG+L+EL+ S+NI IISN+TF +SPS +HP YC N + G+T+L+PL
Sbjct: 163 WDKFHAKELTYTRGYLLELLYSNNI-IISNVTFVDSPSWNLHPTYCTNVTISGITILAPL 221
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
++PNTDG+DP D YI SG+ +AVKSGWD GI PS +I +RR++ +P
Sbjct: 222 NSPNTDGIDPDSSSHVKIEDSYIVSGDDCIAVKSGWDQYGIKFNMPSQHILIRRLTCISP 281
Query: 114 TCSGVGIGREMSGRIFNV-TVNHLDVWMQQ---------QGSYKDRLRLYG--------- 154
T + + +G EMSG I +V V+++ + + +G Y + + G
Sbjct: 282 TSAMIALGSEMSGGIRDVRAVDNVAIDTESAVRIKSGVGRGGYVKDVFVRGLSLHTMKWV 341
Query: 155 ---------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS- 204
HP DP A+P+++GI++ +V + N T A + GI + ICM NV+
Sbjct: 342 FWMTGNYGQHPDNSSDPNALPEVTGINYSDVFAENVTMAGRMEGIPNDPYTGICMSNVTA 401
Query: 205 -LLVQAPSVKWQCRFVSG 221
L A ++W C V G
Sbjct: 402 QLAPDAKKLQWNCTDVKG 419
>gi|411101510|gb|AFW04075.1| polygalacturonase [Litchi chinensis]
Length = 481
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/262 (36%), Positives = 142/262 (54%), Gaps = 40/262 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + + L TR +L+E+M SN + ISNLTF NSPS +HP+Y N ++G+T+L+P+
Sbjct: 179 WGKFKKNQLDVTRPYLIEIM-YSNQVQISNLTFVNSPSWNVHPIYSSNVIIQGLTILAPV 237
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DPD CYI SG+ +AVKSGWD GI + P+ + +RRV+ +P
Sbjct: 238 DSPNTDGIDPDSCTDIRIEDCYIVSGDDCIAVKSGWDQYGIKVGMPTQRLVIRRVTCISP 297
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQGS---------------YKDRLRL------ 152
+ + +G EMSG I +V + Q G Y R+ +
Sbjct: 298 DSATIALGSEMSGGIRDVRAEDITAIDTQSGVRIKTGVGRGGYVKDIYVRRMTMKTMKYV 357
Query: 153 ------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
YG HP G+DPKA+P I GI++ ++V+ N T + L GI F+ IC+ NV++
Sbjct: 358 FWMTGSYGQHPDPGFDPKALPDIHGINYRDMVAENVTYSARLDGIPNDPFKGICIFNVTI 417
Query: 206 -LVQAP-SVKWQCRFVSGFNGQ 225
L + P ++W C V G +
Sbjct: 418 TLTKKPKELQWNCTDVQGVTSR 439
>gi|302809176|ref|XP_002986281.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
gi|300145817|gb|EFJ12490.1| hypothetical protein SELMODRAFT_124011 [Selaginella moellendorffii]
Length = 445
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/261 (38%), Positives = 136/261 (52%), Gaps = 45/261 (17%)
Query: 5 LWW----NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+WW N +L +TRGHLVE +NS NI ++SN++ NSPS TIHPVYC N ++G+TV++
Sbjct: 157 VWWHWFRNQSLNYTRGHLVEFINSKNI-VVSNISLLNSPSWTIHPVYCSNVVIRGVTVVA 215
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P +PNTDG+ PD C I SG V+VKSGWD GI + PS+ + +RR++
Sbjct: 216 PSESPNTDGVQPDSCTGVCIEDCAITSGGDAVSVKSGWDEYGIQVGLPSAKVVIRRITAQ 275
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG------------------------SYK 147
P + + G EMSG I NV V + V+ + G S
Sbjct: 276 APASAAIAFGSEMSGGIKNVVVEDVRVFNSKIGVHVKTGAGRGGYVKNISVTNVTMDSVL 335
Query: 148 DRLRLYG-----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN 202
+ L G HP EG+DP A P + GI V N + A L G+ FE+IC+ N
Sbjct: 336 TAIALSGNSSSEHPDEGYDPLAYPVVRGIYVNKVWGRNISHAGSLRGLEAAPFEDICLSN 395
Query: 203 VSLLVQAPS--VKWQCRFVSG 221
++L V S KW C V G
Sbjct: 396 ITLEVDEASQGSKWDCSNVKG 416
>gi|242094380|ref|XP_002437680.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
gi|241915903|gb|EER89047.1| hypothetical protein SORBIDRAFT_10g000660 [Sorghum bicolor]
Length = 495
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/262 (38%), Positives = 144/262 (54%), Gaps = 40/262 (15%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
M W + + LK+TRG+L+ELM+S I ISNLT NSP+ IHPVY N V+G+T+L+
Sbjct: 184 MWWSKFHKNQLKYTRGYLIELMHSDTIY-ISNLTLLNSPAWNIHPVYSSNIVVQGITILA 242
Query: 61 PLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P ++PNTDG++P DCYI SG+ VA+KSGWD GI+ PS +I +RR++
Sbjct: 243 PTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCV 302
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSY-KD----RLRLY--- 153
+PT + + +G EMSG I +V + + +G+Y KD R+ L
Sbjct: 303 SPTSAVIALGSEMSGGIQDVRAEDITAINSESGVRIKTAVGRGAYVKDVFVRRMTLTTMK 362
Query: 154 ----------GHPKEGWDPKAIPKISGISFVNVVSVNTTK-APVLAGIIGTQFEEICMKN 202
HP + +DP AIP + IS+ +VV+ K A L GI G F+ IC+ N
Sbjct: 363 WVFWMTGNYKSHPDDKYDPNAIPVVDNISYQDVVATGVYKEAARLEGIQGAPFKGICVAN 422
Query: 203 VSL-LVQAPSVKWQCRFVSGFN 223
V+ L ++ W C V G +
Sbjct: 423 VTADLSKSRKYPWTCADVEGVS 444
>gi|297742322|emb|CBI34471.3| unnamed protein product [Vitis vinifera]
Length = 447
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 144/258 (55%), Gaps = 41/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W++W TL+ TR +L+EL+NS NI IISN+ F +SP IHPVYCRN V+ +T+L+P
Sbjct: 166 WNMWRQRTLQFTRPNLIELINSRNI-IISNVIFRDSPFWNIHPVYCRNVVVQFVTILAPH 224
Query: 63 SAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DPD YI +G+ LVAVKSGWD GIA RPSS I +RR++G++P
Sbjct: 225 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSGITIRRITGSSP 284
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG--------------------SYKDRLR-- 151
+G+ +G E SG + NV H++++ G Y ++ R
Sbjct: 285 -FAGIAVGSETSGGVQNVFAEHINLYNMGVGIHLKTNIGRGGVIRNITVSNVYMEKARTG 343
Query: 152 ------LYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
+ HP + ++P A+P + G+ +V ++ + + G+ + F IC+ ++L
Sbjct: 344 IKIAGDVGDHPDDNFNPNALPVVKGVVIRDVWGLDVLQPGSIIGLKNSPFTGICLSKINL 403
Query: 206 --LVQAPSVKWQCRFVSG 221
++ + W+C VSG
Sbjct: 404 HGKIKPGTAPWKCSDVSG 421
>gi|242042413|ref|XP_002468601.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
gi|241922455|gb|EER95599.1| hypothetical protein SORBIDRAFT_01g048880 [Sorghum bicolor]
Length = 463
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/258 (37%), Positives = 141/258 (54%), Gaps = 40/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + LK TRGHL+EL++S NI IISN+TF ++P +HP YC N + G+T+L+PL
Sbjct: 168 WDKFHAKELKSTRGHLLELLHSDNI-IISNVTFVDAPYWNLHPTYCTNVTISGVTILAPL 226
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
++PNTDG+DP DCYI SG+ VAVKSGWD GI PS +I +RR++ +P
Sbjct: 227 NSPNTDGIDPDSSTHVKIEDCYIVSGDDCVAVKSGWDEYGIKFNMPSQHIVIRRLTCISP 286
Query: 114 TCSGVGIGREMSGRIF------NVTVNHLDVWMQQQGS---------YKDRLRL------ 152
T + + +G EMSG I N+ +N + G+ + L L
Sbjct: 287 TSAMIALGSEMSGGIRDVRAEDNIAINTESAVRIKSGAGRGGFVKDIFVRGLSLHTMKWV 346
Query: 153 ------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV-- 203
YG HP +P A+P+++GI++ +V + N T A + GI + IC+ NV
Sbjct: 347 FWMTGNYGQHPDNTSNPNAMPEVTGINYSDVFAENVTTAGRMEGIPNDPYTGICISNVTA 406
Query: 204 SLLVQAPSVKWQCRFVSG 221
SL A ++W C V G
Sbjct: 407 SLAPNATELQWNCTNVKG 424
>gi|356513351|ref|XP_003525377.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 469
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 143/263 (54%), Gaps = 44/263 (16%)
Query: 4 DLWWNS----TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
DLWW LK+TR +L+E+M S N+ ISNLT NSPS +HP+Y N V+G+T+L
Sbjct: 163 DLWWQKFRKGELKYTRPYLIEIMYSDNVQ-ISNLTLVNSPSWNVHPIYSSNLVVQGITIL 221
Query: 60 SPLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P+++PNTDG++P DCYI SG+ VAVKSGWD GIA P+ + +RR++
Sbjct: 222 APVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTC 281
Query: 111 TTPTCSGVGIGREMSGRIFNVTVN-----------HLDVWMQQQGSYKD----RLRL--- 152
+P + + +G EMSG I +V + + + G KD R+ +
Sbjct: 282 ISPFSAVIALGSEMSGGIQDVRAEDIVAINSESGVRIKTAVGRGGYVKDIFVRRMTMKTM 341
Query: 153 ---------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN 202
YG H + +DP A+P I I++ ++V+ N T A L GI G F IC+ N
Sbjct: 342 KWAFWMTGNYGSHADDNYDPNALPVIQNINYRDMVAENVTMAARLEGISGDPFTGICISN 401
Query: 203 VS--LLVQAPSVKWQCRFVSGFN 223
V+ L +A V W C ++G +
Sbjct: 402 VTIQLAKKAKKVPWTCTDIAGIS 424
>gi|357494037|ref|XP_003617307.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
gi|355518642|gb|AET00266.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
Length = 450
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 144/260 (55%), Gaps = 43/260 (16%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W++W TL+ TR +LVE +NS +I IISN+ F +SP IHPVYC N ++ T+L+P
Sbjct: 168 WNMWRKRTLQFTRPNLVEFVNSKDI-IISNVIFKDSPFWNIHPVYCSNVVIRFATILAPR 226
Query: 63 SAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DPD YI +G+ LVAVKSGWD GIA R SSNI +RRVSG++P
Sbjct: 227 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRSSSNITIRRVSGSSP 286
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSY------------------------KDR 149
+G+ +G E SG + N+ H++++ G + +
Sbjct: 287 -FAGIAVGSETSGGVENILAEHINLYNMGIGIHIKTNIGRGGYIKNINVSNVYIENARKG 345
Query: 150 LRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
+++ G H + +D A+P + GI+ NV V +A ++ G+ + F +IC+ +++L
Sbjct: 346 IKISGDVGDHADDKYDSNALPIVKGITMANVWGVKVLQAGLIKGMKHSPFTDICLSDINL 405
Query: 206 L----VQAPSVKWQCRFVSG 221
++ + WQC VSG
Sbjct: 406 HGVNGTRSRTPSWQCSDVSG 425
>gi|297597216|ref|NP_001043594.2| Os01g0618900 [Oryza sativa Japonica Group]
gi|54290860|dbj|BAD61521.1| polygalacturonase-like [Oryza sativa Japonica Group]
gi|255673471|dbj|BAF05508.2| Os01g0618900 [Oryza sativa Japonica Group]
Length = 308
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/256 (38%), Positives = 142/256 (55%), Gaps = 39/256 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD+W TL TR HL+ELMNSS++++ SN+ F +SP IHPVYC N ++ +TVL+P
Sbjct: 29 WDMWKKGTLPFTRPHLLELMNSSDVVV-SNVVFQDSPFWNIHPVYCSNVVIRNVTVLAPH 87
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DP DCYI +G+ L+A+KSGWD G+A RPSS+I +RR++G++P
Sbjct: 88 DSPNTDGIDPDSSSNVCIEDCYISTGDDLIAIKSGWDEYGMAYGRPSSHITIRRITGSSP 147
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG------------------------SYKDR 149
+G +G E SG + +V HL+ + G S +
Sbjct: 148 -FAGFAVGSETSGGVEHVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDSVRYG 206
Query: 150 LRLY----GHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
LR+ GHP + +D A+P + G++ NV N +A + GI + F IC+ NV L
Sbjct: 207 LRIAGDVGGHPDDRYDRNALPVVDGLTIKNVQGQNIREAGSIKGIATSAFSRICLSNVKL 266
Query: 206 LVQAPSVKWQCRFVSG 221
A W+C VSG
Sbjct: 267 NGGAAVRPWKCEAVSG 282
>gi|293332875|ref|NP_001170283.1| uncharacterized protein LOC100384246 precursor [Zea mays]
gi|224028521|gb|ACN33336.1| unknown [Zea mays]
gi|413925951|gb|AFW65883.1| hypothetical protein ZEAMMB73_311601 [Zea mays]
Length = 451
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/256 (38%), Positives = 132/256 (51%), Gaps = 39/256 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W++W TL+HTR +LVE M+S+ I I SN+ NSP IHPVYC N V M +L+P
Sbjct: 173 WNMWRRRTLEHTRPNLVEFMHSTGIHI-SNIVLKNSPFWNIHPVYCDNVVVTNMMILAPR 231
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DP D YI +G+ LVA+KSGWD GIA RPS+ + VRRV G++P
Sbjct: 232 DSPNTDGVDPDSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSAGVTVRRVRGSSP 291
Query: 114 TCSGVGIGREMSGRIFNVTVN-----------HLDVWMQQQGSYK----DRLRLYG---- 154
SG+ IG E SG + +V V H+ + + G + D +RL G
Sbjct: 292 -FSGIAIGSEASGGVRDVLVEDCAIFDSGYGIHIKTNVGRGGYIRNVTVDGVRLTGVRSG 350
Query: 155 ---------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
HP + A+P + + NV VN + L GI + F IC+ NV L
Sbjct: 351 VRIAGDVGDHPDAHFSQLAVPTVDAVRISNVWGVNVQQPGSLEGIRASPFTRICLSNVKL 410
Query: 206 LVQAPSVKWQCRFVSG 221
W+CR V G
Sbjct: 411 FGWRSDAAWKCRDVRG 426
>gi|125526876|gb|EAY74990.1| hypothetical protein OsI_02888 [Oryza sativa Indica Group]
Length = 445
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/256 (37%), Positives = 140/256 (54%), Gaps = 39/256 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD+W TL TR HL+ELMNSS++++ + F +SP IHPVYC N ++ +TVL+P
Sbjct: 166 WDMWKKGTLPFTRPHLLELMNSSDVVVSNV-VFQDSPFWNIHPVYCSNVVIRNVTVLAPH 224
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DP DCYI +G+ L+A+KSGWD G+A RPSS+I +RR++G++P
Sbjct: 225 DSPNTDGIDPDSSSNVCIEDCYISTGDDLIAIKSGWDEYGMAYGRPSSHITIRRITGSSP 284
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG------------------------SYKDR 149
+G +G E SG + +V HL+ + G S +
Sbjct: 285 -FAGFAVGSETSGGVEHVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDSVRYG 343
Query: 150 LRLY----GHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
LR+ GHP + +D A+P + G++ NV N +A + GI + F IC+ NV L
Sbjct: 344 LRIAGDVGGHPDDRYDRNALPVVDGLTIKNVQGQNIREAGSIKGIATSAFSRICLSNVKL 403
Query: 206 LVQAPSVKWQCRFVSG 221
A W+C VSG
Sbjct: 404 NGGAAVRPWKCEAVSG 419
>gi|302814173|ref|XP_002988771.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
gi|300143592|gb|EFJ10282.1| hypothetical protein SELMODRAFT_128450 [Selaginella moellendorffii]
Length = 445
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/261 (37%), Positives = 136/261 (52%), Gaps = 45/261 (17%)
Query: 5 LWW----NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+WW N +L +TRGHLVE +NS NI ++SN++ NSPS TIHPVYC N ++G+TV++
Sbjct: 157 VWWHWFRNQSLNYTRGHLVEFINSKNI-VVSNISLLNSPSWTIHPVYCSNVVIRGVTVVA 215
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P +PNTDG+ PD C I SG V+VKSGWD GI + PS+ + +RR++
Sbjct: 216 PSESPNTDGVQPDSCTGVCIEDCAITSGGDAVSVKSGWDEYGIRVGLPSAKVVIRRITAQ 275
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRLYG------- 154
P + + G EMSG I NV V + V+ + +G Y + +
Sbjct: 276 APASAAIAFGSEMSGGIKNVVVEDVRVFNSKIGVHVKTGAGRGGYVKNISVTNVTMDSVL 335
Query: 155 ------------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN 202
HP EG+DP A P + GI V N + A L G+ FE+IC+ N
Sbjct: 336 TAIALSGNSSSEHPDEGYDPLAYPVVRGIYVNKVWGRNISHAGSLRGLEAAPFEDICLSN 395
Query: 203 VSLLVQAPS--VKWQCRFVSG 221
++L V S KW C V G
Sbjct: 396 ITLEVDDASQGSKWDCSNVKG 416
>gi|297817470|ref|XP_002876618.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322456|gb|EFH52877.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 137/258 (53%), Gaps = 40/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + LK+TR +L+ELM S I I SNLTF +SPS IHPVY N VKG+T+++P+
Sbjct: 168 WQKFHGGKLKYTRPYLIELMFSDTIQI-SNLTFLDSPSWNIHPVYSSNIIVKGVTIIAPV 226
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG++P DCYI SG+ +AVKSGWD GI+ P+ ++ +RR++ +P
Sbjct: 227 KSPNTDGINPDSCTNTRIEDCYIISGDDCIAVKSGWDEYGISFGMPTKHLVIRRLTCISP 286
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQGS---------------YKDRLRLY----- 153
+ + +G EMSG I +V + + + G Y + L+
Sbjct: 287 YSAAIALGSEMSGGIEDVRAEDITAYQTESGVRIKTAVGRGAFVKNIYVKGMNLHTMKWV 346
Query: 154 --------GHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
H +DP A+P+I+GI++ ++V+ N + A L GI G F IC+ N ++
Sbjct: 347 FWMTGNYKAHADSHYDPHALPEITGINYRDIVAENVSMAGRLEGISGDPFTGICISNATI 406
Query: 206 LVQAPSVK--WQCRFVSG 221
+ A K W C V G
Sbjct: 407 SMAAKHKKAIWMCSDVEG 424
>gi|15233124|ref|NP_191708.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|42572755|ref|NP_974473.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|334186188|ref|NP_001190154.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|6850840|emb|CAB71079.1| putative protein [Arabidopsis thaliana]
gi|332646690|gb|AEE80211.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646691|gb|AEE80212.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332646692|gb|AEE80213.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 476
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 137/258 (53%), Gaps = 40/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + LK+TR +L+ELM S I I SNLTF +SPS IHPVY N VKG+T+++P+
Sbjct: 168 WQKFHGGKLKYTRPYLIELMFSDTIQI-SNLTFLDSPSWNIHPVYSSNIIVKGVTIIAPV 226
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG++P DCYI SG+ +AVKSGWD GI+ P+ ++ +RR++ +P
Sbjct: 227 KSPNTDGINPDSCTNTRIEDCYIISGDDCIAVKSGWDEYGISFGMPTKHLVIRRLTCISP 286
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQGS---------------YKDRLRLY----- 153
+ + +G EMSG I +V + + + G Y + L+
Sbjct: 287 YSAAIALGSEMSGGIEDVRAEDITAYQTESGVRIKTAVGRGAFVKNIYVKGMNLHTMKWV 346
Query: 154 --------GHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
H +DP A+P+I+GI++ ++V+ N + A L GI G F IC+ N ++
Sbjct: 347 FWMTGNYKAHADSHYDPHALPEITGINYRDIVAENVSMAGRLEGISGDPFTGICISNATI 406
Query: 206 LVQAPSVK--WQCRFVSG 221
+ A K W C V G
Sbjct: 407 SMAAKHKKAIWMCSDVEG 424
>gi|359489656|ref|XP_003633958.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 479
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/262 (36%), Positives = 138/262 (52%), Gaps = 44/262 (16%)
Query: 5 LWWN----STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
LWW LK+TR +L+ELM S++I ISNLT NSPS +HPVY RN ++G+T+L+
Sbjct: 172 LWWQRFHGGKLKYTRPYLIELMYSADIQ-ISNLTLLNSPSWNVHPVYSRNILIQGITILA 230
Query: 61 PLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P+ +PNTDG++P DCYI SG+ VAVKSGWD GIA P+ + +RR++
Sbjct: 231 PVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCI 290
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRLYG------- 154
+P + + +G EMSG I +V + + +G Y + + G
Sbjct: 291 SPYSAVIALGSEMSGGIQDVRAEDIVAINSESGIRIKTGIGRGGYVKDIYVRGMTMKTMK 350
Query: 155 -----------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
H +DPKA P I GI++ ++V+ N + A L GI F IC+ NV
Sbjct: 351 WAFWMTGNYGSHADNHYDPKAFPVIQGINYRDMVAENVSMAARLEGIPSDPFTGICISNV 410
Query: 204 S--LLVQAPSVKWQCRFVSGFN 223
+ L +A V W C V G +
Sbjct: 411 TIHLAAKAKKVPWTCTDVEGIS 432
>gi|223635599|sp|A7PZL3.1|PGLR_VITVI RecName: Full=Probable polygalacturonase; Short=PG; AltName:
Full=Pectinase
Length = 491
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/262 (36%), Positives = 138/262 (52%), Gaps = 44/262 (16%)
Query: 5 LWWN----STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
LWW LK+TR +L+ELM S++I ISNLT NSPS +HPVY RN ++G+T+L+
Sbjct: 184 LWWQRFHGGKLKYTRPYLIELMYSADIQ-ISNLTLLNSPSWNVHPVYSRNILIQGITILA 242
Query: 61 PLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P+ +PNTDG++P DCYI SG+ VAVKSGWD GIA P+ + +RR++
Sbjct: 243 PVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCI 302
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRLYG------- 154
+P + + +G EMSG I +V + + +G Y + + G
Sbjct: 303 SPYSAVIALGSEMSGGIQDVRAEDIVAINSESGIRIKTGIGRGGYVKDIYVRGMTMKTMK 362
Query: 155 -----------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
H +DPKA P I GI++ ++V+ N + A L GI F IC+ NV
Sbjct: 363 WAFWMTGNYGSHADNHYDPKAFPVIQGINYRDMVAENVSMAARLEGIPSDPFTGICISNV 422
Query: 204 S--LLVQAPSVKWQCRFVSGFN 223
+ L +A V W C V G +
Sbjct: 423 TIHLAAKAKKVPWTCTDVEGIS 444
>gi|224034791|gb|ACN36471.1| unknown [Zea mays]
Length = 347
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/256 (38%), Positives = 132/256 (51%), Gaps = 39/256 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W++W TL+HTR +LVE M+S+ I I SN+ NSP IHPVYC N V M +L+P
Sbjct: 69 WNMWRRRTLEHTRPNLVEFMHSTGIHI-SNIVLKNSPFWNIHPVYCDNVVVTNMMILAPR 127
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DP D YI +G+ LVA+KSGWD GIA RPS+ + VRRV G++P
Sbjct: 128 DSPNTDGVDPDSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSAGVTVRRVRGSSP 187
Query: 114 TCSGVGIGREMSGRIFNVTVN-----------HLDVWMQQQGSYK----DRLRLYG---- 154
SG+ IG E SG + +V V H+ + + G + D +RL G
Sbjct: 188 -FSGIAIGSEASGGVRDVLVEDCAIFDSGYGIHIKTNVGRGGYIRNVTVDGVRLTGVRSG 246
Query: 155 ---------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
HP + A+P + + NV VN + L GI + F IC+ NV L
Sbjct: 247 VRIAGDVGDHPDAHFSQLAVPTVDAVRISNVWGVNVQQPGSLEGIRASPFTRICLSNVKL 306
Query: 206 LVQAPSVKWQCRFVSG 221
W+CR V G
Sbjct: 307 FGWRSDAAWKCRDVRG 322
>gi|413942575|gb|AFW75224.1| glycoside hydrolase, family 28 [Zea mays]
Length = 506
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 142/269 (52%), Gaps = 52/269 (19%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
M W + + LK+TRG+L+ELM+S I ISNLT NSP+ IHPVY N V+G+T+L+
Sbjct: 202 MWWSKFHKNQLKYTRGYLIELMHSDTIY-ISNLTLLNSPAWNIHPVYSSNIVVQGITILA 260
Query: 61 PLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P ++PNTDG++P DCYI SG+ VA+KSGWD GI+ PS +I +RR++
Sbjct: 261 PTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCV 320
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHL----------------------DVWMQQQ------ 143
+PT + + +G EMSG I +V + DV+ ++
Sbjct: 321 SPTSAVIALGSEMSGGIQDVRAEDITAINTESAVRIKTAVGRGAYVRDVFARRMTLTTMK 380
Query: 144 ------GSYKDRLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTK-APVLAGIIGTQFE 196
G YK HP + +DP A+P ++ IS+ +VV+ K A L GI G F
Sbjct: 381 RVFWMTGDYKS------HPDDKYDPNAVPVVANISYQDVVATGVYKEAARLQGIQGAPFR 434
Query: 197 EICMKNVSL-LVQAPSVKWQCRFVSGFNG 224
IC+ NV+ L ++ W C + G +
Sbjct: 435 GICVANVTADLSKSRKYPWNCADIEGVSA 463
>gi|357114278|ref|XP_003558927.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 462
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/258 (37%), Positives = 143/258 (55%), Gaps = 40/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + L +TRG+L+EL+ S +I IISN+TF ++PS +HP YC N + G+T+L+P+
Sbjct: 167 WDKYHAKELTYTRGYLLELLYSHDI-IISNVTFVDAPSWNLHPTYCTNVTISGVTILAPV 225
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DP DCYI SG+ +AVKSGWD GI PS +I VRR++ +P
Sbjct: 226 HSPNTDGIDPDSSSYVKIEDCYIVSGDDCIAVKSGWDEYGIKFNMPSQHIVVRRLTCISP 285
Query: 114 TCSGVGIGREMSGRIF------NVTVN-----HLDVWMQQQGSYKD----RLRL------ 152
T + + +G EMSG I N+ +N + + + G KD L L
Sbjct: 286 TSAMIALGSEMSGGIQDVRAEDNIAINTESAVRIKSGVGRGGFVKDVFVRGLSLHTMKWV 345
Query: 153 ------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS- 204
YG HP +PKA+P+++GI++ +V + N T A + GI + ICM NV+
Sbjct: 346 FWMTGNYGQHPDNSSNPKALPEVTGINYRDVFAENVTMAGRMEGIPNDPYTGICMSNVTA 405
Query: 205 -LLVQAPSVKWQCRFVSG 221
L A ++W C V G
Sbjct: 406 QLAPDAKKLQWNCTDVKG 423
>gi|413948635|gb|AFW81284.1| hypothetical protein ZEAMMB73_960645 [Zea mays]
Length = 458
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/258 (37%), Positives = 140/258 (54%), Gaps = 41/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD+W TL TR HL+ELM S+++ ++SNL F +SP IHPVYC N + +TVL+P
Sbjct: 180 WDMWKKRTLPFTRPHLLELMYSTDV-VVSNLVFQDSPFWNIHPVYCSNVVIANLTVLAPH 238
Query: 63 SAPNTDGLD---------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+D DCYI +G+ L+++KSGWD G+A RPSS I VRR++G+ P
Sbjct: 239 DSPNTDGIDLDSSSNVCVEDCYISAGDDLISIKSGWDEYGVAFGRPSSGITVRRITGSGP 298
Query: 114 TCSGVGIGREMSGRIFNVTVNHL----------------------DVWMQQ----QGSYK 147
+G +G E SG + +V HL +V + Q Y
Sbjct: 299 -FAGFAVGSETSGGVEDVVAEHLSFSGVGVGVHVKTNSGRGGFIRNVTVSQVTLDGARYG 357
Query: 148 DRLR--LYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
R+ + GHP ++ +P I G++ NV N +A ++ GI + F IC+ NV L
Sbjct: 358 LRIAGDVGGHPGASYNASLLPVIDGVAVRNVWGRNVRQAGLIRGIRDSVFSNICLSNVKL 417
Query: 206 L-VQAPSV-KWQCRFVSG 221
+ + S+ W+CR VSG
Sbjct: 418 YGIGSDSIGPWRCRAVSG 435
>gi|356534103|ref|XP_003535597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 466
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 137/259 (52%), Gaps = 44/259 (16%)
Query: 6 WWNS----TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
WWN L TR +L+E+M S I I S LT NSP+ +HPVY N +KG+T+ +P
Sbjct: 170 WWNKFHQGQLTLTRPYLIEIMYSDQIQI-SFLTLVNSPTWFVHPVYSSNIIIKGLTIKAP 228
Query: 62 LSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
+ +PNTDG++PD C I SG+ +AVKSGWD GI P+ ++ +RR++ +
Sbjct: 229 VDSPNTDGINPDSCSNIRIEDCNITSGDDCIAVKSGWDEYGIRFGMPTQHLIIRRITCVS 288
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRLYG-------- 154
P + + +G EMSG I++V L + +G Y + + G
Sbjct: 289 PDSAMIALGSEMSGGIYDVRAEDLTAINTEAAVRIKTAIGRGGYVKNIFVKGMNLNTMKY 348
Query: 155 ----------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
HP G+DPKA+P I+GI++ +VV+ N TK+ L GI F IC+ NVS
Sbjct: 349 VFWITGTYGDHPDPGYDPKALPYITGINYRDVVATNVTKSARLEGISNDPFTGICISNVS 408
Query: 205 LLV--QAPSVKWQCRFVSG 221
+ V Q ++W C +SG
Sbjct: 409 IQVSEQQKKLQWNCSNISG 427
>gi|195644726|gb|ACG41831.1| glycoside hydrolase, family 28 [Zea mays]
Length = 439
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 142/269 (52%), Gaps = 52/269 (19%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
M W + + LK+TRG+L+ELM+S I ISNLT NSP+ IHPVY N V+G+T+L+
Sbjct: 135 MWWSKFHKNQLKYTRGYLIELMHSDTIY-ISNLTLLNSPAWNIHPVYSSNIVVQGITILA 193
Query: 61 PLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P ++PNTDG++P DCYI SG+ VA+KSGWD GI+ PS +I +RR++
Sbjct: 194 PTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCV 253
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHL----------------------DVWMQQQ------ 143
+PT + + +G EMSG I +V + DV+ ++
Sbjct: 254 SPTSAVIALGSEMSGGIQDVRAEDITAINTESAVRIKTAVGRGAYVRDVFARRMTLTTMK 313
Query: 144 ------GSYKDRLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTK-APVLAGIIGTQFE 196
G YK HP + +DP A+P ++ IS+ +VV+ K A L GI G F
Sbjct: 314 RVFWMTGDYK------SHPDDKYDPNAVPVVANISYQDVVATGVYKEAARLQGIQGAPFR 367
Query: 197 EICMKNVSL-LVQAPSVKWQCRFVSGFNG 224
IC+ NV+ L ++ W C + G +
Sbjct: 368 GICVANVTADLSKSRKYPWNCADIEGVSA 396
>gi|226506670|ref|NP_001151164.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|194707808|gb|ACF87988.1| unknown [Zea mays]
gi|413942574|gb|AFW75223.1| glycoside hydrolase, family 28 [Zea mays]
Length = 486
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 142/269 (52%), Gaps = 52/269 (19%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
M W + + LK+TRG+L+ELM+S I ISNLT NSP+ IHPVY N V+G+T+L+
Sbjct: 182 MWWSKFHKNQLKYTRGYLIELMHSDTIY-ISNLTLLNSPAWNIHPVYSSNIVVQGITILA 240
Query: 61 PLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P ++PNTDG++P DCYI SG+ VA+KSGWD GI+ PS +I +RR++
Sbjct: 241 PTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCV 300
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHL----------------------DVWMQQQ------ 143
+PT + + +G EMSG I +V + DV+ ++
Sbjct: 301 SPTSAVIALGSEMSGGIQDVRAEDITAINTESAVRIKTAVGRGAYVRDVFARRMTLTTMK 360
Query: 144 ------GSYKDRLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTK-APVLAGIIGTQFE 196
G YK HP + +DP A+P ++ IS+ +VV+ K A L GI G F
Sbjct: 361 RVFWMTGDYKS------HPDDKYDPNAVPVVANISYQDVVATGVYKEAARLQGIQGAPFR 414
Query: 197 EICMKNVSL-LVQAPSVKWQCRFVSGFNG 224
IC+ NV+ L ++ W C + G +
Sbjct: 415 GICVANVTADLSKSRKYPWNCADIEGVSA 443
>gi|356520375|ref|XP_003528838.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 482
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/259 (36%), Positives = 137/259 (52%), Gaps = 40/259 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + LK+TR +L+ELM S I I SNLT NSPS +HPVY N +KG+T+++P+
Sbjct: 178 WQKFHKKKLKYTRPYLIELMFSDQIQI-SNLTLLNSPSWNLHPVYSSNIIIKGLTIIAPV 236
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG++P DCYI SG+ VAVKSGWD GI P+ + +RR++ +P
Sbjct: 237 PSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISP 296
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQGS---------------YKDRLRL------ 152
+ + +G EMSG I +V + + G Y R+ +
Sbjct: 297 QSAAIALGSEMSGGIQDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWV 356
Query: 153 ------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
YG H +DPKA+P+I+GI++ +VV+ N T A L GI F IC+ NV++
Sbjct: 357 FWMTGNYGSHADSHYDPKALPEINGINYRDVVADNVTMAARLEGISNDPFTGICIANVTI 416
Query: 206 LVQAPSVK--WQCRFVSGF 222
+ A + K W C + G
Sbjct: 417 GMAAKAKKQPWTCTDIEGI 435
>gi|255537765|ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223549848|gb|EEF51336.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 446
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/258 (36%), Positives = 143/258 (55%), Gaps = 41/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W++W TL+ TR +LVE +NS I IISN+ F NSP IHPVYC N ++ +T+L+P
Sbjct: 165 WNMWRQRTLQFTRPNLVEFLNSRGI-IISNVIFQNSPFWNIHPVYCSNVVIRFVTILAPH 223
Query: 63 SAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DPD YI +G+ LVAVKSGWD GIA RPSS+I +RR++G++P
Sbjct: 224 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSHITIRRITGSSP 283
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSY------------------------KDR 149
+G+ +G E SG + +V +++++ G + +
Sbjct: 284 -FAGIAVGSETSGGVEHVLAENINLYDMGVGLHVKTNIGRGGFIRNITFSDVYMKNARKG 342
Query: 150 LRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
+++ G HP + ++P A+P + GI F V N + + G+ + F IC+ N++L
Sbjct: 343 IKIAGDVGDHPDDNYNPNALPVVKGIIFRGVWGENVLQPGAIQGLKSSPFTGICLSNINL 402
Query: 206 L-VQAP-SVKWQCRFVSG 221
V P S W+C VSG
Sbjct: 403 HGVPGPRSTPWKCSDVSG 420
>gi|356522584|ref|XP_003529926.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 498
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 135/260 (51%), Gaps = 41/260 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W ++N L +TR +L+ELM S I I SNLTF NSPS +HPVY N +KG+T+++P+
Sbjct: 193 WQQFYNKRLNYTRPYLIELMFSDKIQI-SNLTFLNSPSWNVHPVYSSNIIIKGLTIIAPV 251
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG++PD CYI SG+ VAVKSGWD GI P+ + +RR++ +P
Sbjct: 252 PSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEFGIKFGWPTKQLVIRRLTCISP 311
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQGS---------------YKDRLRLYGHPKE 158
+ + +G EMSG I +V + + G Y R+ ++
Sbjct: 312 QSAAIALGSEMSGGIQDVRAEDITAIHTESGVRIKTSIGRGGYVKDIYVRRMTMHTMKWA 371
Query: 159 GW--------------DPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV- 203
W DPKA+P+I GI++ +VV+ N T A L GI + F IC+ NV
Sbjct: 372 FWMTGNYGSYANNSHYDPKALPEIKGINYRDVVADNVTMAATLEGISNSPFTGICIANVT 431
Query: 204 -SLLVQAPSVKWQCRFVSGF 222
S+ +A W C + G
Sbjct: 432 ISMADKANEKPWTCTDIEGI 451
>gi|356499323|ref|XP_003518491.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Glycine max]
Length = 445
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/259 (36%), Positives = 141/259 (54%), Gaps = 41/259 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W+ W TL+ TR +LVE +NS +I IISN+ F +SP IHP C N V+ +T+L+P
Sbjct: 187 WNKWKQRTLQFTRPNLVEFVNSRDI-IISNVIFKSSPFWNIHPFLCSNVVVRYVTILAPR 245
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DP D YI +G+ LVA KSGWD GI RPSS+I +RRV+G++P
Sbjct: 246 DSPNTDGIDPHSSSNVCIEDSYISTGDDLVAEKSGWDEYGIVYGRPSSDITIRRVTGSSP 305
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSY------------------------KDR 149
+G+ IG E SG + NV H++++ G + +
Sbjct: 306 -FAGIAIGSETSGGVENVLSEHINLYNMGIGIHIKTNTGRAGYIKNITMSHVYMEEARKG 364
Query: 150 LRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
+R+ G HP + +DP A+P + G++ NV V +A ++ G+ F +IC +++L
Sbjct: 365 IRISGDVGDHPDDKYDPNALPLVKGVTIKNVWGVKVLQAGLIQGLSSXPFRDICQYDINL 424
Query: 206 L-VQAPSV-KWQCRFVSGF 222
V P W+C VSGF
Sbjct: 425 HGVTGPRTPPWKCTDVSGF 443
>gi|226508288|ref|NP_001151102.1| glycoside hydrolase, family 28 precursor [Zea mays]
gi|195644332|gb|ACG41634.1| glycoside hydrolase, family 28 [Zea mays]
gi|219886803|gb|ACL53776.1| unknown [Zea mays]
gi|414864493|tpg|DAA43050.1| TPA: glycoside hydrolase, family 28 [Zea mays]
Length = 463
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 97/258 (37%), Positives = 140/258 (54%), Gaps = 40/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + LK TRGHL+EL+ S NI IISN+TF ++P +HP YC N + G+T+L+P+
Sbjct: 168 WDKFHAKELKFTRGHLLELLYSDNI-IISNVTFVDAPYWNLHPTYCTNVTISGVTILAPV 226
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
++PNTDG+DP DCYI SG+ VAVKSGWD GI PS +I +RR++ +P
Sbjct: 227 NSPNTDGIDPDSSSRVKIEDCYIVSGDDCVAVKSGWDEYGIRFNMPSQHIVIRRLTCVSP 286
Query: 114 TCSGVGIGREMSGRIFN------VTVNHLDVWMQQQGS---------YKDRLRL------ 152
T + + +G EMSG I + V +N + G+ + L L
Sbjct: 287 TSAMIALGSEMSGGIRDVRAEDSVAINTESAVRVKSGAGRGGFVRDIFVRGLSLHTMKWV 346
Query: 153 ------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS- 204
YG HP DP A+P+++GI++ +V + N T A + GI + IC+ NV+
Sbjct: 347 FWMTGNYGQHPDNTSDPNAMPEVTGINYSDVFAENVTMAGRMEGIPKDPYTGICISNVTA 406
Query: 205 -LLVQAPSVKWQCRFVSG 221
L A ++W C V G
Sbjct: 407 RLAPDAKELQWNCTNVKG 424
>gi|226509250|ref|NP_001149385.1| LOC100283011 precursor [Zea mays]
gi|195626846|gb|ACG35253.1| polygalacturonase [Zea mays]
Length = 446
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 140/258 (54%), Gaps = 41/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD+W TL TR HL+ELM S+++ ++SNL F +SP IHPVYC N + +TVL+P
Sbjct: 168 WDMWKKRTLPFTRPHLLELMYSTDV-VVSNLVFQDSPFWNIHPVYCSNVVIANLTVLAPH 226
Query: 63 SAPNTDGLD---------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+D DCYI +G+ L+++KSGWD G+A RPSS I VRR++G+ P
Sbjct: 227 DSPNTDGIDLDSSSNVCVEDCYISAGDDLISIKSGWDEYGVAFGRPSSGITVRRITGSGP 286
Query: 114 TCSGVGIGREMSGRIFNVTVNHL----------------------DVWMQQ----QGSYK 147
+G +G E SG + +V HL +V + Q Y
Sbjct: 287 -FAGFAVGSETSGGVEDVVAEHLSFSGVGVGVHVKTNSGRGGFIRNVTVSQVTLDGARYG 345
Query: 148 DRLR--LYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
R+ + GHP ++ +P + G++ NV N +A ++ GI + F IC+ NV L
Sbjct: 346 LRIAGDVGGHPGASYNASLLPVVDGVAVRNVWGRNVRQAGLIRGIRDSVFSNICLSNVKL 405
Query: 206 L-VQAPSV-KWQCRFVSG 221
+ + S+ W+CR VSG
Sbjct: 406 YGIGSDSIGPWRCRAVSG 423
>gi|168046254|ref|XP_001775589.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673007|gb|EDQ59536.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 483
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 97/260 (37%), Positives = 140/260 (53%), Gaps = 43/260 (16%)
Query: 5 LWWNS----TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+WW+S TL+HTRGHL+EL+ + +IL ISNLTF NSP TIHPVY +N VK +T+L+
Sbjct: 206 VWWSSFRSKTLEHTRGHLLELIEAQDIL-ISNLTFQNSPFWTIHPVYSKNVVVKRVTILN 264
Query: 61 PLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
PL++PNTDG+DP DCYI G+ +++KSGWD G PS I ++RV
Sbjct: 265 PLNSPNTDGIDPDSSQYVCIEDCYISVGDDAISIKSGWDQYGTGFGMPSKYIRIQRVVAF 324
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRL--------- 152
+ T +G+ G EMSG I ++ V+ + + + +G+Y + +
Sbjct: 325 SHTSAGISFGSEMSGGISDIEVDDMVITNSRWGVRFKTSVGRGAYIRNVTVNNIVMHTVR 384
Query: 153 --------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
YG HP E W+ A P I I N+V N T+A +L G+ F +I + V
Sbjct: 385 TAIAVMGNYGEHPDENWNRTAYPVIENILVGNIVGENITQAGLLLGLPDAPFHDIHLTKV 444
Query: 204 SLLVQAPSV-KWQCRFVSGF 222
L + W C +V+GF
Sbjct: 445 VLDTRTTKQGPWNCSWVTGF 464
>gi|356530824|ref|XP_003533980.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 476
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 135/256 (52%), Gaps = 38/256 (14%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + LK TR +++E+M S +I I SNLT +SPS +HP+Y + ++G+T+L+P+
Sbjct: 176 WDKFHKGELKLTRPYMIEIMFSDHIQI-SNLTLIDSPSWFVHPIYSSDIIIQGLTILAPV 234
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG++PD CYI SG+ VA+KSGWD GI PS +I +RR+ +P
Sbjct: 235 DSPNTDGINPDSCSNTRIEDCYIVSGDDCVAIKSGWDESGIKFGMPSQHIIIRRLECVSP 294
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRLYG--------- 154
+ + +G EMSG I +V L Q +G+Y + + G
Sbjct: 295 DSAMIALGSEMSGGIRDVRAEELTALNTQSAVRIKTAVGRGAYVRDIFVKGMNLNTMKYV 354
Query: 155 ---------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
HP +DPKA+P I+GI++ +V++ N T + L GI F IC+ NV++
Sbjct: 355 FWMTGSYGSHPNTDFDPKALPNITGINYRDVIADNVTYSARLEGIANDPFTGICISNVTI 414
Query: 206 LVQAPSVKWQCRFVSG 221
+W C + G
Sbjct: 415 HSGKKKPQWNCTDIEG 430
>gi|15238207|ref|NP_199002.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|10177371|dbj|BAB10662.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|50897172|gb|AAT85725.1| At5g41870 [Arabidopsis thaliana]
gi|332007355|gb|AED94738.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 140/256 (54%), Gaps = 39/256 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W++W + TLK TR L+E NS+NIL+ S++ NSP T+HPVYC N V +T+L+P
Sbjct: 169 WNMWRHGTLKFTRPGLIEFNNSTNILV-SHVVLQNSPFWTLHPVYCSNVVVHHVTILAPT 227
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+ NTDG+DP D YI +G+ LVAVKSGWD GIA RPS +I +RR++G++P
Sbjct: 228 DSYNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYNRPSRDITIRRITGSSP 287
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVW--------------------MQQQGSYKDRLR-- 151
+G+ IG E SG I NVTV ++ ++ + G Y +++R
Sbjct: 288 -FAGIAIGSETSGGIQNVTVENITLYNSGIGIHIKTNIGRGGSIQGITISGVYLEKVRTG 346
Query: 152 ------LYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
HP + ++ A+P + GI+ NV + +A ++ G+ + F +C NV+L
Sbjct: 347 IKISGDTGDHPDDKFNTSALPIVRGITIKNVWGIKVERAGMVQGLKDSPFTNLCFSNVTL 406
Query: 206 LVQAPSVKWQCRFVSG 221
S W+C V G
Sbjct: 407 TGTKRSPIWKCSDVVG 422
>gi|224075086|ref|XP_002304552.1| predicted protein [Populus trichocarpa]
gi|222841984|gb|EEE79531.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 155 bits (393), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 96/258 (37%), Positives = 143/258 (55%), Gaps = 41/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W++W TL TR +LVE +NS I IISN+ F NSP IHPVY RN ++ +T+L+PL
Sbjct: 131 WNMWRQRTLLFTRPNLVEFVNSRGI-IISNVIFRNSPFWNIHPVYSRNVVIRYVTILAPL 189
Query: 63 SAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DPD YI +G+ LVAVKSGWD GIA RPSS+I +RR++G++P
Sbjct: 190 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYGRPSSDITIRRITGSSP 249
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG--------------------SYKDRLR-- 151
SG+ +G E SG + NV V +++++ G Y + +R
Sbjct: 250 -FSGIAVGSETSGGVKNVLVENVNLYNMGVGIHIKTNIGRGGFIKNITVTDVYMENVRKG 308
Query: 152 ------LYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
+ HP + ++P A+P + GI+ ++ + + G+ + F IC+ N++L
Sbjct: 309 IKIAGDVGDHPDDSFNPNALPVVYGITLKSIWGEKVQQPGSIQGLKNSPFTGICLSNINL 368
Query: 206 L-VQAP-SVKWQCRFVSG 221
V P S W+C VSG
Sbjct: 369 HGVPGPRSSPWKCSDVSG 386
>gi|225431820|ref|XP_002273305.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 457
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/259 (34%), Positives = 138/259 (53%), Gaps = 39/259 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + + +L ++R HLVE + S+N+ ++SNLTF N+P+ IHPVYC N V+ ++V +P
Sbjct: 164 WDWFTSHSLNYSRPHLVEFLASTNV-VVSNLTFLNAPAYNIHPVYCSNVRVQNISVYAPP 222
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+P T G+ PD C I G+ +A+KSGWD GIA RP++N+ +RRV+ +
Sbjct: 223 ESPYTVGIVPDSSDSTCIEDCSIAMGHDAIALKSGWDEYGIAYGRPTTNVHIRRVNLQSS 282
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVW----------MQQQGSYKDRL------------- 150
+ S + G EMSG I NV V + ++ + +G Y +
Sbjct: 283 SGSSLAFGSEMSGGISNVCVEQVHLYNSFSGIEFRTTKGRGGYIQEIIISDVAMENIHTA 342
Query: 151 -----RLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
++ HP + +DP A+P + I+ NV+ N T A GI + F IC+ N+SL
Sbjct: 343 FSATGQIGSHPDDHFDPNALPVLDHITLQNVIGTNITIAGSFTGIQESPFTSICLSNISL 402
Query: 206 LVQAP-SVKWQCRFVSGFN 223
P S+ W C VSGF+
Sbjct: 403 STTPPASISWVCSNVSGFS 421
>gi|296083315|emb|CBI22951.3| unnamed protein product [Vitis vinifera]
Length = 482
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/259 (34%), Positives = 138/259 (53%), Gaps = 39/259 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + + +L ++R HLVE + S+N+ ++SNLTF N+P+ IHPVYC N V+ ++V +P
Sbjct: 162 WDWFTSHSLNYSRPHLVEFLASTNV-VVSNLTFLNAPAYNIHPVYCSNVRVQNISVYAPP 220
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+P T G+ PD C I G+ +A+KSGWD GIA RP++N+ +RRV+ +
Sbjct: 221 ESPYTVGIVPDSSDSTCIEDCSIAMGHDAIALKSGWDEYGIAYGRPTTNVHIRRVNLQSS 280
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVW----------MQQQGSYKDRL------------- 150
+ S + G EMSG I NV V + ++ + +G Y +
Sbjct: 281 SGSSLAFGSEMSGGISNVCVEQVHLYNSFSGIEFRTTKGRGGYIQEIIISDVAMENIHTA 340
Query: 151 -----RLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
++ HP + +DP A+P + I+ NV+ N T A GI + F IC+ N+SL
Sbjct: 341 FSATGQIGSHPDDHFDPNALPVLDHITLQNVIGTNITIAGSFTGIQESPFTSICLSNISL 400
Query: 206 LVQAP-SVKWQCRFVSGFN 223
P S+ W C VSGF+
Sbjct: 401 STTPPASISWVCSNVSGFS 419
>gi|356560736|ref|XP_003548644.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 479
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 136/259 (52%), Gaps = 40/259 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + LK+TR +L+ELM S I I SNLT NSPS +HPVY N +KG+T+++P+
Sbjct: 178 WQKFQKKKLKYTRPYLIELMFSDKIQI-SNLTLLNSPSWNVHPVYSSNIIIKGLTIIAPV 236
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG++P DCYI SG+ VAVKSGWD GI P+ + +RR++ +P
Sbjct: 237 PSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISP 296
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQGS---------------YKDRLRL------ 152
+ + +G EMSG I +V + + G Y R+ +
Sbjct: 297 ESAAIALGSEMSGGIQDVRAEDITAIHTESGVRIKTAVGRGGYVKDIYVKRMTMHTMKWV 356
Query: 153 ------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
YG H +DP A+P+I+GI++ +VV+ N T A L GI F IC+ NV++
Sbjct: 357 FWMTGNYGSHADSHYDPNALPEINGINYRDVVADNVTIAARLEGISNDPFTGICIANVTI 416
Query: 206 LVQAPSVK--WQCRFVSGF 222
+ A + K W C + G
Sbjct: 417 NMAAKAKKQPWACTDIEGI 435
>gi|357443845|ref|XP_003592200.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481248|gb|AES62451.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 481
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/258 (36%), Positives = 134/258 (51%), Gaps = 40/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + +K TR +++E+M S I I SNLT NSPS +HPVY N + G+T+L+P+
Sbjct: 179 WDKFHKGQMKITRPYMIEIMYSDQIQI-SNLTLINSPSWFVHPVYSSNIIINGLTILAPV 237
Query: 63 SAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
PNTDG+DPD YI SG+ +A+KSGWD GI +PS I +RR++ +P
Sbjct: 238 DIPNTDGIDPDSCTNVRIEDNYIVSGDDCIAIKSGWDEYGIKFGKPSQQIIIRRLTCISP 297
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRLYG--------- 154
+ V +G EMSG I +V V + + +G+Y + + G
Sbjct: 298 KSAMVALGSEMSGGIQDVRVEDVTAIKTESAVRIKTAIGRGAYVKDIFVKGMNLDTMKYV 357
Query: 155 ---------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
HP G+DP A+PKIS I++ +V + N T A L GI F IC+ N ++
Sbjct: 358 FWMTGSYKSHPDNGFDPNALPKISEINYRDVTAKNVTIAGKLDGISNDPFTGICVSNATI 417
Query: 206 LVQAPSVK--WQCRFVSG 221
+ A K W C VSG
Sbjct: 418 EMSAHKKKLPWNCTDVSG 435
>gi|359490609|ref|XP_002273177.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 465
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 138/262 (52%), Gaps = 40/262 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + LK TR +L+E+M S + I SNL +SPS +HP Y N ++ +T+++P+
Sbjct: 168 WDKFRADKLKDTRPYLIEIMYSDQVQI-SNLILIDSPSWNVHPTYSSNVIIQWLTIIAPV 226
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG++PD C+I SG+ +AVKSGWD GI P+ ++ +RR++ +P
Sbjct: 227 GSPNTDGINPDSSKNVLIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLIIRRLTCISP 286
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRLYG--------- 154
+ + +G EMSG I NV ++ + +G Y + G
Sbjct: 287 DSAVIALGSEMSGGIKNVRAENITAIDSESGVRIKSGVGRGGYVKDIYARGMTMKTMKYV 346
Query: 155 ---------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
HP +GWDPKA+PKI I++ ++V+ N T + L GI G F IC+ NV +
Sbjct: 347 FWMTGDYGQHPDDGWDPKALPKIENINYRDMVAENVTYSARLDGISGDPFTGICISNVKI 406
Query: 206 -LVQAP-SVKWQCRFVSGFNGQ 225
L + P ++W C V G + Q
Sbjct: 407 GLTEKPKKLQWNCTNVEGVSSQ 428
>gi|356530050|ref|XP_003533597.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 134/262 (51%), Gaps = 44/262 (16%)
Query: 4 DLWWNS----TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
+ WW LK+TR +L+ELM S NI ISNLT NSPS +HPVY N V+G+T+
Sbjct: 175 EFWWQQFHRKKLKYTRPYLIELMFSDNIQ-ISNLTLLNSPSWNVHPVYSSNIIVQGITIF 233
Query: 60 SPLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P+++PNTDG++P DCYI SG+ VAVKSGWD GI P+ + +RR++
Sbjct: 234 APVTSPNTDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLMIRRLTC 293
Query: 111 TTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGS---------------YKDRLRLY-- 153
+P + + +G EMSG I +V + + G Y R+ L+
Sbjct: 294 ISPYSATIALGSEMSGGIQDVRAEDITAIQTESGVRIKTAVGRGGYVKDIYVKRMTLHTM 353
Query: 154 -----------GHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN 202
H +DP A+P+I I++ +VV+ N T A GI F IC+ N
Sbjct: 354 KWAFKMTGDYNSHADSHYDPNALPEIKNINYRDVVAENVTIAARFQGISNDPFTGICIAN 413
Query: 203 VSLLVQAPSVK--WQCRFVSGF 222
V+L + A + K W C + G
Sbjct: 414 VTLRMAAKAKKQPWTCTDIEGM 435
>gi|297821649|ref|XP_002878707.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324546|gb|EFH54966.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 137/251 (54%), Gaps = 40/251 (15%)
Query: 14 TRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD 73
TR + +E+M S N+ I SN+T +SP+ IHPVYC N VKG+T+L+P+ +PNTDG++PD
Sbjct: 191 TRPYTIEIMFSQNVQI-SNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPD 249
Query: 74 ---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREM 124
CY+ SG+ +AVKSGWD GI + P+ +++RR++ +P +G+ +G EM
Sbjct: 250 SCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTKQLSIRRLTCISPDSAGIALGSEM 309
Query: 125 SGRIFNVTVNHLDVWMQQQ-----------GSYKD----RLRLYG-------------HP 156
SG I +V + + + Q G KD R + HP
Sbjct: 310 SGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHP 369
Query: 157 KEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLVQAPSVK--W 214
G+DPKA+P+I+ I++ ++ + N T+ L G F +ICM N+ + + A K W
Sbjct: 370 ASGFDPKAMPEITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLW 429
Query: 215 QCRFVSGFNGQ 225
C +SG + +
Sbjct: 430 NCTNISGVSSK 440
>gi|30692538|gb|AAP33475.1| polygalacturonase-like protein [Fragaria x ananassa]
Length = 474
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 141/262 (53%), Gaps = 44/262 (16%)
Query: 4 DLWWNS----TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
+ WW LK+TR +L+E+M SS+I ISNLT NSPS +HPVY N V+G+T++
Sbjct: 168 EFWWQQFHKKKLKYTRPYLIEIMFSSDIQ-ISNLTLLNSPSWNVHPVYSSNIIVQGITII 226
Query: 60 SPLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P+S+PNTDG++P DCYI SG+ VAVKSGWD GI+ P+ + +RR++
Sbjct: 227 APISSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLVIRRLTC 286
Query: 111 TTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSY-KD----RLRL--- 152
+P + + +G EMSG I +V + + +G+Y KD R+ L
Sbjct: 287 ISPYSATIALGSEMSGGIQDVRAEDIVAINTESAVRIKTAVGRGAYVKDIYVRRMTLHTM 346
Query: 153 ---------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN 202
YG H +D A P+I+GI++ +VV+ N T A L GI F ICM N
Sbjct: 347 KWAFWMTGNYGSHADGNYDKNAFPEITGINYRDVVAENVTMAARLEGIADHPFTGICMSN 406
Query: 203 VS--LLVQAPSVKWQCRFVSGF 222
V+ L +A W C + G
Sbjct: 407 VTIGLAKKAKKQPWTCTDIQGI 428
>gi|356568425|ref|XP_003552411.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 484
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 134/262 (51%), Gaps = 44/262 (16%)
Query: 4 DLWWNS----TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
+ WW LK+TR +L+ELM S NI ISNLT NSPS +HPVY N V+G+T+
Sbjct: 175 EFWWQQFHRKKLKYTRPYLIELMFSDNIQ-ISNLTLLNSPSWNVHPVYSSNIIVQGITIY 233
Query: 60 SPLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P+++PNTDG++P DCYI SG+ VAVKSGWD GI P+ + +RR++
Sbjct: 234 APVTSPNTDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTC 293
Query: 111 TTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGS---------------YKDRLRLY-- 153
+P + + +G EMSG I +V + + G Y R+ L+
Sbjct: 294 ISPYSATIALGSEMSGGIQDVRAEDITAIQTESGVRIKTAVGRGGYVKDIYVKRMTLHTM 353
Query: 154 -----------GHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN 202
H +DP A+P+I I++ +VV+ N T A GI F IC+ N
Sbjct: 354 KWAFKMTGDYNSHADGHYDPNALPEIKNINYRDVVAENVTIAARFQGISNDPFTGICIAN 413
Query: 203 VSLLVQAPSVK--WQCRFVSGF 222
V+L + A + K W C + G
Sbjct: 414 VTLRMAAKAKKQPWTCTDIEGM 435
>gi|242061204|ref|XP_002451891.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
gi|241931722|gb|EES04867.1| hypothetical protein SORBIDRAFT_04g009310 [Sorghum bicolor]
Length = 448
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/258 (37%), Positives = 130/258 (50%), Gaps = 41/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W++W TL+HTR +LVE M+S+ I I SN+ NSP IHPVYC N V M +L+P
Sbjct: 168 WNMWRRRTLEHTRPNLVEFMHSTGIHI-SNIVLKNSPFWNIHPVYCDNVVVTNMMILAPH 226
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DP D YI +G+ LVA+KSGWD GIA RPSS I +RRV G++P
Sbjct: 227 DSPNTDGIDPDSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRRVRGSSP 286
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSY---------------KDRLRLYG---- 154
SG+ IG E SG + +V V ++ G + D +R+ G
Sbjct: 287 -FSGIAIGSEASGGVRDVLVEDCSIFDSGYGIHIKTNVGRGGYIRNVTVDNVRMSGVRIS 345
Query: 155 ----------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
HP + A+P + + NV VN L GI + F IC+ NV
Sbjct: 346 GVRIAGDVGDHPDAHFSQLAVPLVDAVRISNVWGVNVQHPGSLEGIRSSPFTRICLSNVK 405
Query: 205 LLV-QAPSVKWQCRFVSG 221
L + W+CR V G
Sbjct: 406 LFGWRKNDAAWRCRDVRG 423
>gi|357478841|ref|XP_003609706.1| hypothetical protein MTR_4g120730 [Medicago truncatula]
gi|355510761|gb|AES91903.1| hypothetical protein MTR_4g120730 [Medicago truncatula]
Length = 459
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 134/260 (51%), Gaps = 43/260 (16%)
Query: 6 WWNS----TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
WW S +L ++R HLVEL+ S+++ ++SNLTF N+P+ IHPVYCRN + +++ +P
Sbjct: 162 WWESFSSHSLNYSRPHLVELVASTDV-VVSNLTFLNAPAYNIHPVYCRNVHIHNISIFAP 220
Query: 62 LSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
+P T G+ P DC I +G +A+KSGWD GIA RP+ N+ +RRV
Sbjct: 221 PESPYTVGIVPDSSDHVCIEDCTIATGYDAIALKSGWDEYGIAYGRPTENVHIRRVHLQA 280
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYG------------------ 154
S + G +MSG I NV V H+ ++ + G +R G
Sbjct: 281 SYGSTLAFGSDMSGGISNVFVEHVHLYNSKGGIEFRTIRGRGGYMKDIILSDIEMKNIYR 340
Query: 155 ----------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
HP + +DP A+P + F +++ N T A AG+ + F IC+ N++
Sbjct: 341 AISATGYCGSHPDDKFDPNALPLLDHFIFQDIIGTNITIAGSFAGLQESPFTNICLSNIT 400
Query: 205 LLVQ-APSVKWQCRFVSGFN 223
L V A S W+C VSGF+
Sbjct: 401 LSVNYASSTSWECSNVSGFS 420
>gi|225426168|ref|XP_002278930.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
Length = 480
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 138/261 (52%), Gaps = 44/261 (16%)
Query: 5 LWW----NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
LWW LK+TR +L+E+M+S N+ IS+LT NSPS +HPVY N ++G+T+ +
Sbjct: 174 LWWAKFHKGELKYTRPYLIEIMHSDNVQ-ISSLTLVNSPSWNVHPVYSSNVIIQGLTITA 232
Query: 61 PLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P+++PNTDG++P DCYI SG+ +AVKSGWD GIA P+ + +RR++
Sbjct: 233 PVTSPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDEYGIAYGMPTKQLVIRRLTCI 292
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRL--------- 152
+P + + +G EMSG I +V + + +G Y + +
Sbjct: 293 SPFSATIALGSEMSGGIEDVRAEDILAIDTESGVRIKTAVGRGGYVKDIYVRSMIMKTMK 352
Query: 153 --------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
YG H +DP A+P I GI++ ++V+ N T A L GI G F IC+ NV
Sbjct: 353 WAFWMTGNYGSHADNNYDPNALPAIQGINYRDMVAENVTMAGRLEGISGDPFTGICISNV 412
Query: 204 S--LLVQAPSVKWQCRFVSGF 222
+ L +A W C ++G
Sbjct: 413 TIGLAKKAKKAPWTCTDIAGI 433
>gi|116831111|gb|ABK28510.1| unknown [Arabidopsis thaliana]
Length = 478
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 136/251 (54%), Gaps = 40/251 (15%)
Query: 14 TRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD 73
TR + +E++ S N+ I SN+T +SP+ IHPVYC N VKG+T+L+P+ +PNTDG++PD
Sbjct: 191 TRPYTIEIIFSQNVQI-SNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPD 249
Query: 74 ---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREM 124
CY+ SG+ +AVKSGWD GI + P+ +++RR++ +P +G+ +G EM
Sbjct: 250 SCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSEM 309
Query: 125 SGRIFNVTVNHLDVWMQQQ-----------GSYKD----RLRLYG-------------HP 156
SG I +V + + + Q G KD R + HP
Sbjct: 310 SGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHP 369
Query: 157 KEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLVQAPSVK--W 214
G+DPKA+P I+ I++ ++ + N T+ L G F +ICM N+ + + A K W
Sbjct: 370 ASGFDPKAMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLW 429
Query: 215 QCRFVSGFNGQ 225
C +SG + +
Sbjct: 430 NCTSISGVSSK 440
>gi|42569272|ref|NP_179968.2| Pectin lyase-like protein [Arabidopsis thaliana]
gi|91806252|gb|ABE65854.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
gi|330252406|gb|AEC07500.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 477
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 136/251 (54%), Gaps = 40/251 (15%)
Query: 14 TRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD 73
TR + +E++ S N+ I SN+T +SP+ IHPVYC N VKG+T+L+P+ +PNTDG++PD
Sbjct: 191 TRPYTIEIIFSQNVQI-SNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPD 249
Query: 74 ---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREM 124
CY+ SG+ +AVKSGWD GI + P+ +++RR++ +P +G+ +G EM
Sbjct: 250 SCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSEM 309
Query: 125 SGRIFNVTVNHLDVWMQQQ-----------GSYKD----RLRLYG-------------HP 156
SG I +V + + + Q G KD R + HP
Sbjct: 310 SGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHP 369
Query: 157 KEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLVQAPSVK--W 214
G+DPKA+P I+ I++ ++ + N T+ L G F +ICM N+ + + A K W
Sbjct: 370 ASGFDPKAMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLW 429
Query: 215 QCRFVSGFNGQ 225
C +SG + +
Sbjct: 430 NCTSISGVSSK 440
>gi|3738338|gb|AAC63679.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 466
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 136/251 (54%), Gaps = 40/251 (15%)
Query: 14 TRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD 73
TR + +E++ S N+ I SN+T +SP+ IHPVYC N VKG+T+L+P+ +PNTDG++PD
Sbjct: 180 TRPYTIEIIFSQNVQI-SNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPD 238
Query: 74 ---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREM 124
CY+ SG+ +AVKSGWD GI + P+ +++RR++ +P +G+ +G EM
Sbjct: 239 SCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSEM 298
Query: 125 SGRIFNVTVNHLDVWMQQQ-----------GSYKD----RLRLYG-------------HP 156
SG I +V + + + Q G KD R + HP
Sbjct: 299 SGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHP 358
Query: 157 KEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLVQAPSVK--W 214
G+DPKA+P I+ I++ ++ + N T+ L G F +ICM N+ + + A K W
Sbjct: 359 ASGFDPKAMPVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLW 418
Query: 215 QCRFVSGFNGQ 225
C +SG + +
Sbjct: 419 NCTSISGVSSK 429
>gi|357443847|ref|XP_003592201.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355481249|gb|AES62452.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 478
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 137/264 (51%), Gaps = 52/264 (19%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + L TR +++E+M S I I SNLT NSP+ +HP+Y N + G+T+L+P+
Sbjct: 178 WDKFHKKQLTLTRPYMIEIMYSDQIQI-SNLTLINSPTWFVHPIYSSNIIINGLTILAPV 236
Query: 63 SAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG++PD +I SG+ +A+KSGWD GI + PS I +RR++ +P
Sbjct: 237 DSPNTDGINPDSCTNVRIEDNFIVSGDDCIAIKSGWDEYGIKVGMPSQQIIIRRLTCISP 296
Query: 114 TCSGVGIGREMSGRIFNVTVNHL----------------------DVWMQ---------- 141
+ V +G EMSG I +V + + D++++
Sbjct: 297 DSAMVALGSEMSGGIQDVRIEDVTAINTESAIRIKSAVGRGAFVKDIFVKGMDLNTMKYV 356
Query: 142 --QQGSYKDRLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEIC 199
GSY D HP G+DP A+PKISGI++ +V + N T A L GI F IC
Sbjct: 357 FWMTGSYGD------HPDNGFDPNALPKISGINYRDVTAKNVTIAGKLEGISNDPFTGIC 410
Query: 200 MKNVSLLVQAPSVK--WQCRFVSG 221
+ NV++ + A K W C +SG
Sbjct: 411 VSNVTIEMSAHKKKLPWNCTDISG 434
>gi|388521929|gb|AFK49026.1| unknown [Lotus japonicus]
Length = 388
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/245 (34%), Positives = 130/245 (53%), Gaps = 38/245 (15%)
Query: 14 TRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP- 72
TR +++E+M S+ I I SNLT NSPS +HP+Y + ++G+T+L+P+ +PNTDG+DP
Sbjct: 125 TRPYMIEIMYSNQIQI-SNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPD 183
Query: 73 --------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREM 124
DCYI SG+ +AVKSGWD GI + PS +I +RR++ +P + + +G EM
Sbjct: 184 SCSNTRIEDCYIVSGDDCIAVKSGWDEYGIKVGMPSQHIIIRRLTCISPDSAMIALGSEM 243
Query: 125 SGRIFNVTVNHLDVWMQQ----------QGSYKDRLRLYG------------------HP 156
SG I ++ L Q +G+Y + + G HP
Sbjct: 244 SGGIQDIRAEDLTAINTQSAVRIKTAVGRGAYVRNIFVEGMNLFTMKYVFWMTGSYGSHP 303
Query: 157 KEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLVQAPSVKWQC 216
G+DPKA+P I+GI++ +V++ N L GI F IC+ N ++ + W C
Sbjct: 304 DTGFDPKALPTITGINYRDVIAKNVAYPAKLEGIANDPFTGICISNANIEKVGKKLAWNC 363
Query: 217 RFVSG 221
V G
Sbjct: 364 TDVHG 368
>gi|302753776|ref|XP_002960312.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
gi|300171251|gb|EFJ37851.1| hypothetical protein SELMODRAFT_74934 [Selaginella moellendorffii]
Length = 455
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/260 (36%), Positives = 134/260 (51%), Gaps = 44/260 (16%)
Query: 5 LWWN----STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+WWN TL+HTRG LVE M SSNIL+ N+T NSP T+HPVY + +KG+T+L+
Sbjct: 180 IWWNRFRSKTLQHTRGSLVEFMFSSNILV-HNVTLINSPFWTLHPVYTSDVMIKGVTILA 238
Query: 61 PLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P APNTDG+DP D YI +G+ VAVKSGWD G+A RPS ++ + V+ T
Sbjct: 239 PHKAPNTDGVDPDSSSNVCIRDTYISNGDDAVAVKSGWDEYGLAFNRPSHDVFL--VNLT 296
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSY-------KDRLR------------- 151
G+ +G EMSG I+NV + + QG + +R
Sbjct: 297 VSGSHGISLGSEMSGGIYNVHAYGVSISGAVQGIHIKTSAGRGAYIRNASFASFEILDTG 356
Query: 152 -------LYG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
+YG HP G++ A I ISF +VV + +A G+ + F C +V
Sbjct: 357 VAFSFTGIYGDHPDAGYNASAFATIENISFRDVVGMRVNRAGDFRGVPQSPFRHTCFTDV 416
Query: 204 SLLVQAPSVKWQCRFVSGFN 223
+L + S W C ++ G++
Sbjct: 417 ALELNGKSNHWNCSYIEGYS 436
>gi|357443839|ref|XP_003592197.1| Endo-polygalacturonase-like protein [Medicago truncatula]
gi|355481245|gb|AES62448.1| Endo-polygalacturonase-like protein [Medicago truncatula]
Length = 475
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 138/258 (53%), Gaps = 40/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + LK TR +++E+M S I I SNLT NSP+ +HP+Y N + +T+L+P+
Sbjct: 178 WDKFQKKQLKITRPYMIEIMYSDQIQI-SNLTLINSPNWFVHPIYSSNIIINRLTILAPV 236
Query: 63 SAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
PNTDG+DPD YI SG+ +A+KSG D GI + +PS I VRR++ +P
Sbjct: 237 DVPNTDGIDPDSCTNVLIEDNYIVSGDDCIAIKSGLDGYGIKVGKPSQKIIVRRLTCISP 296
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRLYG--------- 154
+ V +G EMSG I ++ + + + +G+Y + + G
Sbjct: 297 KSAMVALGSEMSGGIQDIRIEDITAINTESAVRIKTAVGRGAYVKDIFVKGMNLNTMKYV 356
Query: 155 ---------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
H + G+DPKA+PKISGI++ ++++ N T A L GI F IC+ NV++
Sbjct: 357 FWMTGAYKSHAENGFDPKALPKISGINYRDIIAKNVTIAGQLDGISNDPFTGICISNVTI 416
Query: 206 LVQAP--SVKWQCRFVSG 221
+ A ++ W C VSG
Sbjct: 417 EMSAQKNNLPWNCTDVSG 434
>gi|302767960|ref|XP_002967400.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
gi|300165391|gb|EFJ31999.1| hypothetical protein SELMODRAFT_87398 [Selaginella moellendorffii]
Length = 426
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/260 (36%), Positives = 134/260 (51%), Gaps = 44/260 (16%)
Query: 5 LWWN----STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+WWN TL+HTRG LVE M SSNIL+ N+T NSP T+HPVY + +KG+T+L+
Sbjct: 151 VWWNRFRSKTLQHTRGSLVEFMFSSNILV-HNVTLINSPFWTLHPVYTSDVMIKGVTILA 209
Query: 61 PLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P APNTDG+DP D YI +G+ VAVKSGWD G+A RPS ++ + V+ T
Sbjct: 210 PHKAPNTDGVDPDSSSNVCIRDTYISNGDDAVAVKSGWDEYGLAFNRPSHDVFL--VNLT 267
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSY-------KDRLR------------- 151
G+ +G EMSG I+NV + + QG + +R
Sbjct: 268 VSGSHGISLGSEMSGGIYNVHAYGVSISGAVQGIHIKTSAGRGAYIRNASFASFEILDTG 327
Query: 152 -------LYG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
+YG HP G++ A I ISF +VV + +A G+ + F C +V
Sbjct: 328 VAFSFTGIYGDHPDAGYNASAFATIENISFRDVVGMRVNRAGDFRGVPQSPFRHTCFTDV 387
Query: 204 SLLVQAPSVKWQCRFVSGFN 223
+L + S W C ++ G++
Sbjct: 388 ALELNGKSNHWNCSYIEGYS 407
>gi|343172553|gb|AEL98980.1| putative polygalacturonase, partial [Silene latifolia]
gi|343172555|gb|AEL98981.1| putative polygalacturonase, partial [Silene latifolia]
Length = 431
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 137/263 (52%), Gaps = 47/263 (17%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + ++ L TR +++ELM S+ + I SNLT NSP+ +HPVYCR+ ++G+T+L+P
Sbjct: 134 WKKYKSNELTQTRPYMIELMYSNGVQI-SNLTLLNSPNWNVHPVYCRDVIIRGLTILAPT 192
Query: 63 SAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DPD YI SG+ +A+KSGWD GI P+ ++ +R ++ +P
Sbjct: 193 HSPNTDGIDPDSCSNVRIEHNYIVSGDDCIAIKSGWDEYGIRFNMPTQDVVIRHLTCISP 252
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG----------------------------- 144
T + + +G EMSG I NV H+ + G
Sbjct: 253 TSATIALGSEMSGGIQNVRAEHITAIDTESGIRVKTSPGRGAFVRNIYVRKMTMKTMKYV 312
Query: 145 ----SYKDRLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICM 200
Y R+ HP ++P+A+P I GI+++++V+ N + L GI F+ IC+
Sbjct: 313 FWMTGYYSSSRV--HPDRHYNPRALPVIEGINYMDMVAANVSMPGYLEGIKEDVFKGICL 370
Query: 201 KNVSL-LVQAP-SVKWQCRFVSG 221
NV++ L + P + W C + G
Sbjct: 371 SNVTIGLAKKPKEMLWNCTNIEG 393
>gi|357150536|ref|XP_003575492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 451
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/261 (36%), Positives = 138/261 (52%), Gaps = 44/261 (16%)
Query: 6 WWN----STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
WWN + L ++R HLVE +S I +ISNLTF NSP+ IHPVYC N V +T+ +
Sbjct: 159 WWNWFRSNKLNYSRPHLVEFEDSEEI-VISNLTFLNSPAWAIHPVYCSNVTVNNITIQTS 217
Query: 62 LSAPNTDGLDPD-----CYIES----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
L AP +DG+ PD C +S + +++KSGWD+ GI RP+S+I + RV
Sbjct: 218 LDAPLSDGIVPDSCSNVCIEDSRISVSHDAISLKSGWDNYGITFGRPTSDIHICRVDLQA 277
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG-SYKD----------------------- 148
+ + +G EMSG I +V V+HL + +G S++
Sbjct: 278 SLGAALALGSEMSGGISDVHVDHLHIHASSKGVSFRTAPGRGGYIRDVIISDVQMEDVHV 337
Query: 149 RLRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
+ G HP E +DP A+P ISGI+ N+V N + A VL+GI G F +IC+ NV+
Sbjct: 338 AIEFTGDWSSHPDEHFDPSALPVISGITLKNMVGTNISVAGVLSGIDGDPFTDICLSNVN 397
Query: 205 LLV--QAPSVKWQCRFVSGFN 223
+ A S W C +SG++
Sbjct: 398 FSIPDSAHSTSWSCSNISGYS 418
>gi|356519942|ref|XP_003528627.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 449
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 140/259 (54%), Gaps = 39/259 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W+L+ + +L ++R HL+EL+ S ++ ++SNLTF N+P+ +IHPVYC N + +++ +P
Sbjct: 162 WELFSSHSLNYSRPHLIELVASDHV-VVSNLTFLNAPAYSIHPVYCSNVHIHNVSISAPP 220
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNT G+ PD C I +G +++KSGWD GIA RP+ N+ +RRV
Sbjct: 221 ESPNTVGIVPDSSDHVCIEDCVIATGYDAISLKSGWDEYGIAYGRPTENVHIRRVHLQAS 280
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVW----------MQQQGSYKDRL--------RLY-- 153
+ S + G +MSG I N+ V ++ ++ M+ +G Y + +Y
Sbjct: 281 SGSTIAFGSDMSGGISNILVENVHLYNSKSGIEFRTMRGRGGYMKEIIISDIEMENIYTA 340
Query: 154 --------GHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
HP + +DP A+P + I +++ N T A AG+ + F IC+ N++L
Sbjct: 341 IAATGYCGSHPDDKFDPNALPLLDHIILQDMIGTNITIAGSFAGLQESPFTNICLSNITL 400
Query: 206 LVQA-PSVKWQCRFVSGFN 223
+ S+ W+C VSGF+
Sbjct: 401 STNSVSSIPWECSNVSGFS 419
>gi|326521404|dbj|BAJ96905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/258 (38%), Positives = 141/258 (54%), Gaps = 39/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + N TL +TR HLVELM S+++ +ISNLTF NSP IHPVYC V+ +T+L+PL
Sbjct: 166 WDWFHNHTLNYTRPHLVELMYSTSV-VISNLTFKNSPFWNIHPVYCSQVIVEHVTILAPL 224
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG++PD CY+ +G+ ++ +KSGWD GI+ A+ SSNI++ ++G T
Sbjct: 225 DSPNTDGINPDSSTNVCISHCYVRNGDDVIVIKSGWDEYGISFAQSSSNISISNITGETG 284
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG------------------------SYKDR 149
+G+ IG EMSG I V L + G +
Sbjct: 285 GGAGIAIGSEMSGGISEVRAEGLRIVNSLHGIRIKTAPGRGGYVRNVYIADVSMHNVSMA 344
Query: 150 LRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
+R+ G HP +D A+P IS I+ NVV ++ A +L GI G F IC+ NVSL
Sbjct: 345 IRITGNYGEHPDSKYDKNALPIISNITIENVVGIDVGVAGILEGIEGDNFSSICISNVSL 404
Query: 206 LVQAPSVKWQCRFVSGFN 223
V+ P W C + G++
Sbjct: 405 SVR-PRYPWNCSRIQGYS 421
>gi|356564613|ref|XP_003550546.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 460
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 141/259 (54%), Gaps = 39/259 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W+L+ + +L ++R HL+EL+ +SN +++SNLTF N+P+ +IHPVYC N + +++ +P
Sbjct: 173 WELFSSHSLNYSRPHLIELV-ASNRVVVSNLTFLNAPAYSIHPVYCSNVHIHNVSISAPQ 231
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+P T G+ PD C I +G +++KSGWD GIA RP+ N+ +RRV
Sbjct: 232 ESPYTIGIVPDSSDHVCIEDCVIATGYDAISLKSGWDEYGIAYGRPTENVHIRRVHLQAY 291
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVW----------MQQQGSYKDRL--------RLY-- 153
+ S + G +MSG I N+ V ++ ++ M+ +G Y + +Y
Sbjct: 292 SGSTIAFGSDMSGGISNILVENVHLYNSKSGIEFRTMRGRGGYMKEIIISDIEMENIYTA 351
Query: 154 --------GHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
HP + +DP A+P + I +++ N T A AG+ + F IC+ NV+L
Sbjct: 352 MAATGYCGSHPDDKFDPNALPLLDHIILQDMIGTNITIAGSFAGLQESPFTNICLSNVTL 411
Query: 206 LVQA-PSVKWQCRFVSGFN 223
+ + S+ W+C VSGF+
Sbjct: 412 SINSVSSIPWECSNVSGFS 430
>gi|224107034|ref|XP_002314352.1| predicted protein [Populus trichocarpa]
gi|222863392|gb|EEF00523.1| predicted protein [Populus trichocarpa]
Length = 435
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 135/258 (52%), Gaps = 38/258 (14%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + + +L ++R HLVE SS+++++SNLTF N+P+ IHPVYC N V+ ++V +P
Sbjct: 162 WDWFESHSLNYSRPHLVEF-TSSDLVVVSNLTFLNAPAYNIHPVYCSNVLVQNISVSAPG 220
Query: 63 SAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+P T G+ PD I+ G +++KSGWD GIA RP+ ++ +RRV +
Sbjct: 221 ESPYTIGIVPDSSNNVCIEDSLIKVGYDAISLKSGWDEYGIAYDRPTQDVHIRRVYLQSS 280
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVW----------MQQQGSYKDRLRL----------- 152
+ S + G EMSG I NV V + ++ + +G Y R+ +
Sbjct: 281 SGSSIAFGSEMSGGISNVYVEQVYLYNSFSGIEFRTTKGRGGYIKRIIISNVELKNINMA 340
Query: 153 YG-------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
+G HP + +DP AIP + I+ NV N T A G+ + F IC+ NVSL
Sbjct: 341 FGAIGDCGSHPDDSFDPNAIPILDQITLQNVTGSNITMAGNFTGLAESPFTSICLFNVSL 400
Query: 206 LVQAPSVKWQCRFVSGFN 223
+ A S W C V GF+
Sbjct: 401 TIPATSTSWTCSNVIGFS 418
>gi|297801376|ref|XP_002868572.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314408|gb|EFH44831.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 138/256 (53%), Gaps = 39/256 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W++W + TL+ TR L+E NS+NI ++S++ NS T+HPVYC N V +T+L+P
Sbjct: 169 WNMWRHGTLEFTRPGLIEFKNSTNI-VVSHVVLQNSAFWTLHPVYCSNVVVHHVTILAPT 227
Query: 63 SAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+ NTDG+DPD YI +G+ LVAVKSGWD GIA PS +I +RR++G++P
Sbjct: 228 DSFNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYNLPSRDITIRRITGSSP 287
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVW--------------------MQQQGSYKDRLR-- 151
+G+ IG E SG I NVTV ++ ++ + G Y +++R
Sbjct: 288 -FAGIAIGSETSGGIQNVTVENITLYNSGIGIHIKTNIGRGGSIQGITISGVYLEKVRTG 346
Query: 152 ------LYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
HP + ++ A+P + GI+ NV + +A ++ G+ + F +C NV+L
Sbjct: 347 IKISGDTGDHPDDKFNTSALPIVRGITIKNVWGIKVERAGMVQGLKDSPFTNLCFSNVTL 406
Query: 206 LVQAPSVKWQCRFVSG 221
+ W+C V G
Sbjct: 407 TGTKSTPIWKCSDVVG 422
>gi|255545184|ref|XP_002513653.1| polygalacturonase, putative [Ricinus communis]
gi|223547561|gb|EEF49056.1| polygalacturonase, putative [Ricinus communis]
Length = 473
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/259 (34%), Positives = 136/259 (52%), Gaps = 44/259 (16%)
Query: 6 WWNS----TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
WWN L TR +L+EL+ S I I SNL NSPS +HP Y N ++G+T+L+P
Sbjct: 175 WWNKFHKGLLNQTRPYLIELLYSHKIQI-SNLILINSPSWNVHPTYSSNVLIQGLTILAP 233
Query: 62 LSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
+ +PNTDG++PD CYI SG+ +AVKSGWD GI P+ + +RR++ +
Sbjct: 234 VDSPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTKKLVIRRLTCIS 293
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSY-KD----RLRL----- 152
P + + +G EMSG I +V + Q +G+Y KD R+
Sbjct: 294 PDSATIALGSEMSGGIQDVRAEDITAINTQSGIRIKTAAGRGAYVKDIFVRRMNFKTMKY 353
Query: 153 -------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMK--N 202
YG HP +G+DP A+P I+ I++ ++V+ N T + L GI F IC+ N
Sbjct: 354 VFWMTGSYGSHPDKGYDPNALPIITRINYRDIVAENVTYSARLEGIEKDPFTGICISNAN 413
Query: 203 VSLLVQAPSVKWQCRFVSG 221
++L + ++W C + G
Sbjct: 414 ITLTKKPEKLQWNCTDIEG 432
>gi|326496208|dbj|BAJ94566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 98/258 (37%), Positives = 141/258 (54%), Gaps = 39/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + N TL +TR HLVELM S+++ +ISNLTF NSP IHPVYC V+ +T+L+PL
Sbjct: 166 WDWFHNHTLNYTRPHLVELMYSTSV-VISNLTFKNSPFWNIHPVYCSQVIVEHVTILAPL 224
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG++PD CY+ +G+ ++ +KSGWD GI+ A+ SSNI++ ++G T
Sbjct: 225 DSPNTDGINPDSSTNVCISHCYVRNGDDVIVIKSGWDEYGISFAQSSSNISISNITGETG 284
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG------------------------SYKDR 149
+G+ IG EMSG I V L + G +
Sbjct: 285 GGAGIAIGSEMSGGISEVRAEGLRIVNSLHGIRIKTAPGRGGYVRNVYIADVSMHNVSMA 344
Query: 150 LRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
+R+ G HP +D A+P IS I+ NVV ++ A +L GI G F IC+ NVSL
Sbjct: 345 IRITGNYGEHPDSKYDKNALPIISNITIENVVGIDVGVAGILEGIEGDNFSSICISNVSL 404
Query: 206 LVQAPSVKWQCRFVSGFN 223
V++ W C + G++
Sbjct: 405 SVRS-RYPWNCSRIQGYS 421
>gi|255550387|ref|XP_002516244.1| polygalacturonase, putative [Ricinus communis]
gi|223544730|gb|EEF46246.1| polygalacturonase, putative [Ricinus communis]
Length = 494
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 141/263 (53%), Gaps = 50/263 (19%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP- 61
W + L HTRG LV++M SS+IL I+N+T +SP T+HP C+N ++ +T+L+P
Sbjct: 199 WKKYRQKLLNHTRGPLVQIMWSSDIL-ITNITLRDSPFWTLHPYDCKNVTIRNVTILAPV 257
Query: 62 LSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
L APNTDG+DP DCYI G+ +A+KSGWD GIA RPS+NI +R + +
Sbjct: 258 LEAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGIAYRRPSTNILIRNLVVRS 317
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG----------------SYK----DRLRL 152
+G+ IG EMSG + N+TV +L VW ++ +Y+ D +R+
Sbjct: 318 MVSAGISIGSEMSGGVSNITVENLLVWSSRRAVRIKTAPGRGGYVRHITYRNLTFDNVRV 377
Query: 153 --------YGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
HP EG+DPKA+P + ISF V + PV I G+ EEI ++NV+
Sbjct: 378 GIVIKTDYNEHPDEGYDPKAVPVLRDISFTGVHG-QGVRVPVR--IHGS--EEIPVRNVT 432
Query: 205 L------LVQAPSVKWQCRFVSG 221
L +QC FV G
Sbjct: 433 FQDMSVGLTYKKKHIFQCAFVQG 455
>gi|356529330|ref|XP_003533248.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 452
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 135/259 (52%), Gaps = 39/259 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + +L H+R HLVE + +S+ +++SNLTF N+P+ +IHPVYC + ++ +++ +P
Sbjct: 160 WDWYSTHSLNHSRPHLVEFV-ASDYVVVSNLTFLNAPAYSIHPVYCSHVHIQNVSISTPP 218
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+P T G+ PD C + G +++KSGWD GIA RP+ N+ +RRV
Sbjct: 219 ESPYTVGIVPDSSDNVCIEDCIVAMGFDAISLKSGWDEYGIAYGRPTENVHIRRVQLHAF 278
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVW----------MQQQGSYKDRLRLY---------- 153
+ S + G +MSG I NV V H ++ + +G Y + +
Sbjct: 279 SGSALAFGSDMSGGISNVLVEHAHLFNSNSGIEFRTTKGRGGYMKEIVMSDIQMENVHTA 338
Query: 154 --------GHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
HP + +DP A+P + I+ +V+ N T A LAGI + F IC+ N++L
Sbjct: 339 IAATGNCGSHPDDKFDPNALPHLDHITLKDVIGTNITIAGNLAGIDESPFTNICLSNITL 398
Query: 206 LVQAPS-VKWQCRFVSGFN 223
+ S + W C VSGF+
Sbjct: 399 STNSVSPITWACSNVSGFS 417
>gi|356565756|ref|XP_003551103.1| PREDICTED: probable polygalacturonase-like isoform 2 [Glycine max]
Length = 491
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 139/263 (52%), Gaps = 51/263 (19%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP- 61
W + L HTRG LV++M SS+I +I+N+T +SP TIHP C+N +KG+T+L+P
Sbjct: 197 WKKYRQKRLNHTRGPLVQIMFSSDI-VITNITLRDSPFWTIHPYDCKNITIKGVTILAPV 255
Query: 62 LSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
APNTDG+DP DCYI G+ +AVKSGWD GI RPS NI +R + +T
Sbjct: 256 FGAPNTDGIDPDSCEDMLIEDCYISVGDDAIAVKSGWDQYGIDYGRPSMNIMIRNLVKST 315
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG----------------SYKD-------- 148
P +G+ IG EMSG + NVTV +L +W ++G +Y++
Sbjct: 316 P-FAGISIGSEMSGGVSNVTVENLLIWDSRRGVRIKTAPGRGAYVRQITYRNITFENVRV 374
Query: 149 ----RLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
+ HP +G+DP A+P + ISF V + PV I G+ EEI ++NV+
Sbjct: 375 GIVMKTDYNEHPDDGYDPLALPILRDISFTTVHG-QGVRVPVR--IHGS--EEIPVRNVT 429
Query: 205 L------LVQAPSVKWQCRFVSG 221
L +QC FV G
Sbjct: 430 FKDMSVGLTYKKKHIFQCAFVQG 452
>gi|218186147|gb|EEC68574.1| hypothetical protein OsI_36908 [Oryza sativa Indica Group]
Length = 449
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 138/260 (53%), Gaps = 40/260 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + L H+R H+VE ++S + +ISNLTF NSP+ +IHPVYC N V +T+ + L
Sbjct: 158 WDWLHSHELNHSRPHIVEFLHSEEV-VISNLTFLNSPAWSIHPVYCSNVKVHNVTIKTSL 216
Query: 63 SAPNTDGLDPD-----CYIES----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
AP TDG+ PD C +S G+ +++KSGWD+ GI+ RP+S+I + RV
Sbjct: 217 DAPLTDGIVPDSCSNVCIEDSSISVGHDAISLKSGWDNYGISFGRPTSDIHISRVDLQAS 276
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG-SYK-------------------DRLRLY 153
+ + + IG EMSG I ++ V+H+ + +G S++ D + L
Sbjct: 277 SGAALAIGSEMSGGISDIHVDHIRIGSSSKGISFRTTPGRGGYIAEVVVADVVMDSVHLA 336
Query: 154 --------GHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV-- 203
HP + +DP +P I I+ N+ N + A VL+GI G F IC+ N+
Sbjct: 337 IEFTGNWSSHPDDHFDPSFLPVIDQITLKNMEGTNISVAGVLSGIEGDPFSAICLSNLNF 396
Query: 204 SLLVQAPSVKWQCRFVSGFN 223
S+ APS W C V G++
Sbjct: 397 SIADSAPSSAWTCSNVHGYS 416
>gi|115486511|ref|NP_001068399.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|77552386|gb|ABA95183.1| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113645621|dbj|BAF28762.1| Os11g0658800 [Oryza sativa Japonica Group]
gi|222616379|gb|EEE52511.1| hypothetical protein OsJ_34717 [Oryza sativa Japonica Group]
Length = 449
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 136/260 (52%), Gaps = 40/260 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + L H+R H+VE ++S + +ISNLTF NSP+ +IHPVYC N V +T+ + L
Sbjct: 158 WDWLHSHELNHSRPHIVEFLHSEEV-VISNLTFLNSPAWSIHPVYCSNVKVHNVTIKTSL 216
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
AP TDG+ P D I G+ +++KSGWD+ GI+ RP+S+I + RV
Sbjct: 217 DAPLTDGIVPDSCSNVCIEDSSISVGHDAISLKSGWDNYGISFGRPTSDIHISRVDLQAS 276
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG-SYK-------------------DRLRLY 153
+ + + IG EMSG I ++ V+H+ + +G S++ D + L
Sbjct: 277 SGAALAIGSEMSGGISDIHVDHIRIGSSSKGISFRTTPGRGGYIAEVVVADVVMDSVHLA 336
Query: 154 --------GHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
HP + +DP +P I I+ N+ N + A VL+GI G F IC+ N++
Sbjct: 337 IEFTGNWSSHPDDHFDPSFLPVIDQITLKNMEGTNISVAGVLSGIEGDPFSAICLSNLNF 396
Query: 206 LVQ--APSVKWQCRFVSGFN 223
+ APS W C V G++
Sbjct: 397 SIADLAPSSAWTCSNVHGYS 416
>gi|357479389|ref|XP_003609980.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355511035|gb|AES92177.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 563
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 140/263 (53%), Gaps = 50/263 (19%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP- 61
W + L +TRG L+++M SS+I +I+++T +SP T+HP C+N +KG+T+L+P
Sbjct: 268 WKKFRQKRLNYTRGPLLQIMWSSDI-VITDITLRDSPFWTLHPYDCKNLTIKGVTILAPV 326
Query: 62 LSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
APNTDG+DPD CYI G+ +A+KSGWD GIA RPS NI +R + +
Sbjct: 327 FEAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIMIRNLVVRS 386
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG----------------SYKD-------- 148
+G+ IG EMSG I NVTV +L VW ++G +Y++
Sbjct: 387 MVSAGISIGSEMSGGISNVTVENLLVWDSRRGVRIKTAPGRGGYVRQITYRNITFENVRV 446
Query: 149 ----RLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
+ HP +G+DP A+P I ISF NV + + PV I G+ EEI ++NV+
Sbjct: 447 GIVMKTDYNEHPDDGYDPTALPVIRDISFTNVYG-HGVRVPVR--IHGS--EEIPVRNVT 501
Query: 205 L------LVQAPSVKWQCRFVSG 221
L +QC FV G
Sbjct: 502 FRDMSVGLTYKKKHIFQCAFVHG 524
>gi|224130360|ref|XP_002328589.1| predicted protein [Populus trichocarpa]
gi|222838571|gb|EEE76936.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 135/258 (52%), Gaps = 38/258 (14%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + + +L ++R HLVE SS+ +++SNLTF N+P+ +IHPVYC N V+ ++V +P
Sbjct: 164 WDWFESHSLNYSRPHLVEF-TSSDYVVVSNLTFLNAPAYSIHPVYCSNVVVQNISVSAPG 222
Query: 63 SAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+P T G+ PD IE G +++KSGWD GIA RP++++ +RRV +
Sbjct: 223 ESPYTIGIVPDSSNNVCIEDSRIEVGYDAISLKSGWDEYGIAYDRPTTDVYIRRVYLQSS 282
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVW----------MQQQGSYKDRLRL----------- 152
+ S V G EMSG I NV V + ++ + +G Y R+ +
Sbjct: 283 SGSSVAFGSEMSGGISNVHVEQVHIYNSFSGIEFRTTKGRGGYIKRIIISDVELKNTNTA 342
Query: 153 YG-------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
+G HP + +DP AIP + I+ V+ N T A G+ + F +C+ NVSL
Sbjct: 343 FGAIGDCGSHPDDNFDPNAIPVLDQITLQGVIGSNITMAGNFTGLAESPFTSLCLFNVSL 402
Query: 206 LVQAPSVKWQCRFVSGFN 223
++ W C V GF+
Sbjct: 403 AIRNTLSPWTCSNVVGFS 420
>gi|356565754|ref|XP_003551102.1| PREDICTED: probable polygalacturonase-like isoform 1 [Glycine max]
Length = 492
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 137/263 (52%), Gaps = 50/263 (19%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP- 61
W + L HTRG LV++M SS+I +I+N+T +SP TIHP C+N +KG+T+L+P
Sbjct: 197 WKKYRQKRLNHTRGPLVQIMFSSDI-VITNITLRDSPFWTIHPYDCKNITIKGVTILAPV 255
Query: 62 LSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
APNTDG+DP DCYI G+ +AVKSGWD GI RPS NI +R + +
Sbjct: 256 FGAPNTDGIDPDSCEDMLIEDCYISVGDDAIAVKSGWDQYGIDYGRPSMNIMIRNLVVRS 315
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG----------------SYKD-------- 148
+G+ IG EMSG + NVTV +L +W ++G +Y++
Sbjct: 316 MVSAGISIGSEMSGGVSNVTVENLLIWDSRRGVRIKTAPGRGAYVRQITYRNITFENVRV 375
Query: 149 ----RLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
+ HP +G+DP A+P + ISF V + PV I G+ EEI ++NV+
Sbjct: 376 GIVMKTDYNEHPDDGYDPLALPILRDISFTTVHG-QGVRVPVR--IHGS--EEIPVRNVT 430
Query: 205 L------LVQAPSVKWQCRFVSG 221
L +QC FV G
Sbjct: 431 FKDMSVGLTYKKKHIFQCAFVQG 453
>gi|297742230|emb|CBI34379.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 129/233 (55%), Gaps = 35/233 (15%)
Query: 5 LWW----NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
LWW LK+TR +L+E+M+S N+ IS+LT NSPS +HPVY N ++G+T+ +
Sbjct: 174 LWWAKFHKGELKYTRPYLIEIMHSDNVQ-ISSLTLVNSPSWNVHPVYSSNVIIQGLTITA 232
Query: 61 PLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P+++PNTDG++P DCYI SG+ +AVKSGWD GIA P+ + +RR++
Sbjct: 233 PVTSPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDEYGIAYGMPTKQLVIRRLTCI 292
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKISGI 171
+P + + +G EMSG I +V + + G +R+ K +GI
Sbjct: 293 SPFSATIALGSEMSGGIEDVRAEDILAIDTESG-----VRI--------------KTAGI 333
Query: 172 SFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS--LLVQAPSVKWQCRFVSGF 222
++ ++V+ N T A L GI G F IC+ NV+ L +A W C ++G
Sbjct: 334 NYRDMVAENVTMAGRLEGISGDPFTGICISNVTIGLAKKAKKAPWTCTDIAGI 386
>gi|356558153|ref|XP_003547372.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 579
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 136/259 (52%), Gaps = 39/259 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + +L H+R HLVE++ +S+ +++SNLTF N+P+ +IHPVYC + ++ +++ +P
Sbjct: 287 WDWYSTHSLNHSRPHLVEIV-ASDYVVVSNLTFLNAPAYSIHPVYCSHVHIQNVSISTPP 345
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+P T G+ PD C + G +++KSGWD GIA RP+ N+ +RRV
Sbjct: 346 ESPYTVGIVPDSSDNVCIEDCIVAMGFDAISLKSGWDEYGIAYGRPTENVHIRRVHLHAF 405
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRLY---------- 153
+ S + G +MSG I NV V H ++ + +G Y + +
Sbjct: 406 SGSALAFGSDMSGGISNVLVEHAHLFNSKSGIEFRTTKGRGGYMKEIVMSDIQMENVHTA 465
Query: 154 --------GHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
HP + +DP A+P + I+ +V N + A +AGI + F IC+ N++L
Sbjct: 466 IAATGNCGSHPDDKFDPNALPHLDHITLKDVTGTNISIAGNIAGIEESPFTNICLSNITL 525
Query: 206 LVQAPS-VKWQCRFVSGFN 223
+ S + W+C VSGF+
Sbjct: 526 STNSVSPITWECSNVSGFS 544
>gi|224142779|ref|XP_002324728.1| predicted protein [Populus trichocarpa]
gi|222866162|gb|EEF03293.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 140/263 (53%), Gaps = 50/263 (19%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + L HTRG LV++M SS+I+ + N+T NSP T+HP C+N ++ +T+L+P+
Sbjct: 200 WKKYRQKLLNHTRGPLVQIMWSSDIVFM-NITLRNSPFWTLHPYDCKNVTIRNVTILAPI 258
Query: 63 -SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
APNTDG+DP DCYI G+ +A+KSGWD GIA RPS+NI +R + +
Sbjct: 259 FEAPNTDGIDPDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSTNILIRNLVVRS 318
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYK----------DRLRL 152
+G+ IG EMSG + +VTV +L VW + +G+Y D +R+
Sbjct: 319 MVSAGISIGSEMSGGVSSVTVENLLVWSSRRAVRIKTAPGRGAYVRNITYRNLTFDDVRV 378
Query: 153 --------YGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
HP EG+DPKA+P + ISF + + PV I G+ EEI ++NV+
Sbjct: 379 GIVIKTDYNEHPDEGYDPKAVPTLQDISFSGIHG-QGVRVPVR--IHGS--EEIPVRNVT 433
Query: 205 L------LVQAPSVKWQCRFVSG 221
L +QC FV G
Sbjct: 434 FQDMSVGLTYKKKHIFQCAFVQG 456
>gi|388509890|gb|AFK43011.1| unknown [Medicago truncatula]
Length = 483
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 134/258 (51%), Gaps = 40/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + LK+TR +L+ELM S +I I SNLT NSPS +HPVY N ++G+T+++P+
Sbjct: 178 WQQFHRKELKYTRPYLIELMFSDSIQI-SNLTLLNSPSWNVHPVYSSNIIIQGITIIAPI 236
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
S+PNTDG++P DCYI SG+ VAVKSGWD GI P+ + +RR++ +P
Sbjct: 237 SSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISP 296
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQGS---------------YKDRLRLY----- 153
+ + +G EMSG I +V + + G Y R ++
Sbjct: 297 FSATIALGSEMSGGIQDVRAEDITAIRTESGVRIKTAVGRGGYVKDIYVKRFTMHTMKWA 356
Query: 154 --------GHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
H +DP A+P+I+ I++ +VV+ N T A GI F+ IC+ NV+L
Sbjct: 357 FKMTGDYNSHADTHFDPNALPEIANINYRDVVAENVTIAARFQGIFNDPFKGICIANVTL 416
Query: 206 --LVQAPSVKWQCRFVSG 221
V+A W C + G
Sbjct: 417 GMAVKAKKRSWTCTDIEG 434
>gi|356547950|ref|XP_003542367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 491
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/263 (36%), Positives = 134/263 (50%), Gaps = 50/263 (19%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP- 61
W + L HTRG LV++M SS+I +I+N+T +SP T+HP C+N +KG+T+L+P
Sbjct: 196 WKKYRQKRLNHTRGPLVQIMFSSDI-VITNITLRDSPFWTLHPYDCKNITIKGVTILAPV 254
Query: 62 LSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
APNTDG+DP DCYI G+ +A+KSGWD GIA RPS NI +R + +
Sbjct: 255 FGAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGRPSMNIMIRNLVVRS 314
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYG------------------ 154
+G+ IG EMSG + NV V ++ +W ++G R G
Sbjct: 315 MVSAGISIGSEMSGGVSNVMVENILIWDSRRGVRIKTARGRGAYVRQITYRNITFENVRV 374
Query: 155 ----------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
HP +G+DP A+P + ISF V + PV I G+ EEI ++NV+
Sbjct: 375 GIVMKTDYNEHPDDGYDPMALPILRDISFTTVHG-QGVRVPVR--IHGS--EEIPVRNVT 429
Query: 205 L------LVQAPSVKWQCRFVSG 221
L +QC FV G
Sbjct: 430 FQDMSVGLTYKKKHIFQCAFVQG 452
>gi|357450133|ref|XP_003595343.1| Polygalacturonase [Medicago truncatula]
gi|355484391|gb|AES65594.1| Polygalacturonase [Medicago truncatula]
gi|388518965|gb|AFK47544.1| unknown [Medicago truncatula]
Length = 474
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 138/264 (52%), Gaps = 54/264 (20%)
Query: 6 WW----NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
WW + L +TRG LV++M SS+I +ISN+T +SP T+HP C+N +K +T+L+P
Sbjct: 178 WWTKHLHKLLNYTRGPLVQIMYSSDI-VISNITLRDSPFWTLHPYDCKNVTIKNVTILAP 236
Query: 62 L-SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
+ APNTDG+DPD CYI G+ +A+KSGWD GIA A+PS NI +R +
Sbjct: 237 VYHAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYAKPSKNIIIRNLVVR 296
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQ----------------QQGSYKD------- 148
+ +G+ IG EMSG + NVT+ ++ VW +Q +Y++
Sbjct: 297 SNVSAGISIGSEMSGGVSNVTIENILVWESRRAIRIKTAPGRGGYVRQITYRNITFHNVR 356
Query: 149 -----RLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
+ HP +G+DP A+P + ISF N+ + PV T EEI ++NV
Sbjct: 357 VGIVIKTDYNEHPDDGYDPTALPILRDISFTNIRG-EGVRVPVRI----TGSEEIPVRNV 411
Query: 204 SL------LVQAPSVKWQCRFVSG 221
+ + +QC FV G
Sbjct: 412 TFHDMNVGITYKKKHIFQCAFVEG 435
>gi|224068502|ref|XP_002326133.1| predicted protein [Populus trichocarpa]
gi|222833326|gb|EEE71803.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/263 (36%), Positives = 140/263 (53%), Gaps = 50/263 (19%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + L HTRG LV++M SS+I + +N+T +SP T+HP C+N ++ +T+L+P+
Sbjct: 200 WKKYRQKLLNHTRGPLVQIMWSSDI-VFTNITLRDSPFWTLHPYDCKNVTIRNVTILAPI 258
Query: 63 -SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
APNTDG+DP DCYI G+ +A+KSGWD GIA RPS+NI +R + +
Sbjct: 259 FEAPNTDGIDPDSCEDMVIEDCYISVGDDAIAIKSGWDQYGIAYGRPSTNILIRNLVVRS 318
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG----------------SYK----DRLRL 152
+G+ IG EMSG + NVTV ++ VW ++ +Y+ D +R+
Sbjct: 319 MVSAGISIGSEMSGGVSNVTVENVLVWSSRRAVRIKTAPGRGGYVRHITYRNLTFDNVRV 378
Query: 153 --------YGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
HP EG+DPKA+P + ISF + + PV I G+Q EI ++NV+
Sbjct: 379 GIVIKTDYNEHPDEGYDPKAVPILGDISFTGIHG-QGVRVPVR--IHGSQ--EIPVRNVT 433
Query: 205 L------LVQAPSVKWQCRFVSG 221
L +QC FV G
Sbjct: 434 FWDMSVGLTYKKKHIFQCAFVQG 456
>gi|356530447|ref|XP_003533792.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 494
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/263 (36%), Positives = 138/263 (52%), Gaps = 50/263 (19%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + L HTRG LV+++ SSNI +ISN+T +SP T+HP C+N VK +T+L+P+
Sbjct: 199 WTKYRQKLLNHTRGPLVQILWSSNI-VISNITLRDSPFWTLHPYDCKNVTVKNVTILAPV 257
Query: 63 S-APNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
S APNTDG+DP DCYI G+ +A+KSGWD GI RPS NI +R + +
Sbjct: 258 SHAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGITYGRPSKNIVIRNLVVRS 317
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQ----------------QQGSYKD-------- 148
+G+ IG EMSG + NV V ++ VW +Q +YK+
Sbjct: 318 NVSAGISIGSEMSGGVSNVLVENILVWESRRAMRIKTAPGRGGYVRQITYKNLMFKNVRV 377
Query: 149 ----RLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
+ HP G+DP+A+P + ISF+N+ + PV I G+ E+I ++NV+
Sbjct: 378 GIVIKTDYNEHPGTGYDPRALPILRDISFINIRG-QGVRVPVR--IQGS--EQIPVRNVT 432
Query: 205 LLVQAPSVKW------QCRFVSG 221
+ + QC FV G
Sbjct: 433 FQDMKIGITYKKKHIFQCAFVQG 455
>gi|357507519|ref|XP_003624048.1| Polygalacturonase [Medicago truncatula]
gi|355499063|gb|AES80266.1| Polygalacturonase [Medicago truncatula]
Length = 483
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 134/258 (51%), Gaps = 40/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + LK+TR +L+ELM S +I I SNLT NSPS +HPVY N ++G+T+++P+
Sbjct: 178 WQQFHRKKLKYTRPYLIELMFSDSIQI-SNLTLLNSPSWNVHPVYSSNIIIQGITIIAPI 236
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
S+PNTDG++P DCYI SG+ VAVKSGWD GI P+ + +RR++ +P
Sbjct: 237 SSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISP 296
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQGS---------------YKDRLRLY----- 153
+ + +G EMSG I +V + + G Y R ++
Sbjct: 297 FSATIALGSEMSGGIQDVRAEDITAIRTESGVRIKTAVGRGGYVKDIYVKRFTMHTMKWA 356
Query: 154 --------GHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
H +DP A+P+I+ I++ +VV+ N T A GI F+ IC+ NV+L
Sbjct: 357 FKMTGDYNSHADTHFDPNALPEIANINYRDVVAENVTIAARFQGISNDPFKGICIANVTL 416
Query: 206 --LVQAPSVKWQCRFVSG 221
V+A W C + G
Sbjct: 417 GMAVKAKKRSWTCTDIEG 434
>gi|297743929|emb|CBI36899.3| unnamed protein product [Vitis vinifera]
Length = 477
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/257 (35%), Positives = 136/257 (52%), Gaps = 39/257 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W+ + + +L ++R H+VE + SSN +IISNLTF NSP+ IHPVYC N +V+ +T +P
Sbjct: 185 WENFSSHSLNYSRPHIVEFI-SSNDIIISNLTFLNSPAWNIHPVYCSNVWVQNITAYAPP 243
Query: 63 SAPNTDGLDPD-----CYIES----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+P T G+ PD C +S G + +KSGWD GIA +P+ N+ +RRV +
Sbjct: 244 ESPRTSGVVPDSSEYICIEDSNISMGYDAIVLKSGWDEYGIAYGKPTRNVHIRRVWLQSS 303
Query: 114 TCSGVGIGREMSGRIFNVTVNHL---------------------------DVWMQQQG-S 145
+ SG+ G EMSG I ++ V H+ DV M+ G +
Sbjct: 304 SGSGLAFGSEMSGGISDILVEHIHLQDSSTGIKLKTTKGRGGYIKGILISDVEMENVGLT 363
Query: 146 YKDRLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
+ HP + +DP A+P + GI+F ++V N + A +GI + F IC+ N+SL
Sbjct: 364 IGATGQCRSHPDDKYDPGALPVVDGITFKDMVGTNVSIAGNFSGIYESPFTSICLFNISL 423
Query: 206 LVQAPSVK-WQCRFVSG 221
+ + S K W C V G
Sbjct: 424 SITSNSSKPWLCSNVFG 440
>gi|356558431|ref|XP_003547510.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 489
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/263 (36%), Positives = 138/263 (52%), Gaps = 50/263 (19%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + L HTRG LV+++ SSNI +ISN+T +SP T+HP C+N VK +T+L+P+
Sbjct: 194 WTKYRQKLLNHTRGPLVQILWSSNI-VISNITLRDSPFWTLHPYDCKNVTVKKVTILAPV 252
Query: 63 S-APNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
S APNTDG+DP DCYI G+ +A+KSGWD GI RPS NI +R + +
Sbjct: 253 SHAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGITYGRPSKNIVIRNLVVRS 312
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQ----------------QQGSYKD-------- 148
+G+ IG EMSG + NV V ++ VW +Q +YK+
Sbjct: 313 NVSAGISIGSEMSGGVSNVLVENILVWESRRAMRIKTAPGRGGYVRQITYKNLMLKNVRV 372
Query: 149 ----RLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
+ HP G+DP+A+P + ISF+N+ + PV I G+ E+I ++NV+
Sbjct: 373 GIVIKTDYNEHPGAGYDPRALPILRDISFMNIRG-QGVRVPVR--IQGS--EQIPVRNVT 427
Query: 205 LLVQAPSVKW------QCRFVSG 221
+ + QC FV G
Sbjct: 428 FQDMKVGITYKKKHIFQCAFVQG 450
>gi|225437457|ref|XP_002269037.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 542
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/257 (35%), Positives = 136/257 (52%), Gaps = 39/257 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W+ + + +L ++R H+VE + SSN +IISNLTF NSP+ IHPVYC N +V+ +T +P
Sbjct: 250 WENFSSHSLNYSRPHIVEFI-SSNDIIISNLTFLNSPAWNIHPVYCSNVWVQNITAYAPP 308
Query: 63 SAPNTDGLDPD-----CYIES----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+P T G+ PD C +S G + +KSGWD GIA +P+ N+ +RRV +
Sbjct: 309 ESPRTSGVVPDSSEYICIEDSNISMGYDAIVLKSGWDEYGIAYGKPTRNVHIRRVWLQSS 368
Query: 114 TCSGVGIGREMSGRIFNVTVNHL---------------------------DVWMQQQG-S 145
+ SG+ G EMSG I ++ V H+ DV M+ G +
Sbjct: 369 SGSGLAFGSEMSGGISDILVEHIHLQDSSTGIKLKTTKGRGGYIKGILISDVEMENVGLT 428
Query: 146 YKDRLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
+ HP + +DP A+P + GI+F ++V N + A +GI + F IC+ N+SL
Sbjct: 429 IGATGQCRSHPDDKYDPGALPVVDGITFKDMVGTNVSIAGNFSGIYESPFTSICLFNISL 488
Query: 206 LVQAPSVK-WQCRFVSG 221
+ + S K W C V G
Sbjct: 489 SITSNSSKPWLCSNVFG 505
>gi|388520257|gb|AFK48190.1| unknown [Lotus japonicus]
Length = 482
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 138/263 (52%), Gaps = 50/263 (19%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + L HTRG LV++M SS+I +I+N+T +SP T+HP C+N +K +T+L+P+
Sbjct: 187 WTKYREKLLNHTRGPLVQIMWSSDI-VIANITLRDSPFWTLHPYDCKNVTIKNVTILAPV 245
Query: 63 -SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
APNTDG+DP DCYI G+ +A+KSGWD GIA +PS NI +R + +
Sbjct: 246 YHAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYGKPSKNIIIRNLVVRS 305
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVW----------------MQQQGSYKD-------- 148
+G+ IG EMSG + NVTV ++ VW +Q +Y++
Sbjct: 306 NVSAGISIGSEMSGGVSNVTVENVLVWESRRAIRIKTAPGRGGYMRQITYRNLTFNNVRV 365
Query: 149 ----RLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
+ HP G+DP A P +S ISF+NV + PV I G++ EI ++NV+
Sbjct: 366 GIVIKTNYNEHPDAGYDPLAFPVLSDISFINVRG-QGVRVPVR--IEGSK--EISVRNVT 420
Query: 205 L------LVQAPSVKWQCRFVSG 221
+ +QC FV G
Sbjct: 421 FQDMNVGITYKKKHIFQCAFVEG 443
>gi|356501888|ref|XP_003519755.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 455
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 131/261 (50%), Gaps = 39/261 (14%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WDL +L ++R H++EL+ S NI IISNLTF NSP+ +IHPVYC N ++ +TV +P
Sbjct: 163 WDLISTHSLNYSRPHIIELVGSDNI-IISNLTFLNSPAWSIHPVYCSNIQIQKITVQAPT 221
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
P T G+ PD C I +G+ + +KSGWD G+A +P+SN+ +R V +
Sbjct: 222 KFPYTSGIVPDSSEHVCIDNCNISTGHDAIVLKSGWDEYGVAYGKPTSNVHIRGVYLQSS 281
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDV----------WMQQQGSYKDRLRLY---------- 153
+ +G+ G EMSG I ++ L + + +G Y + +
Sbjct: 282 SGAGLAFGSEMSGGISDIIAEQLHITNSTFGIELKTTRGRGGYMKNIFISDAKLENIYLG 341
Query: 154 --------GHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
HP + +DP A+P + ++F NV+ N A +GI+ + F IC+ NV+
Sbjct: 342 ISMTGSSGSHPDDKYDPNAVPDVGNVTFENVIGANIAIAGNFSGIVDSPFTPICLSNVTF 401
Query: 206 -LVQAPSVKWQCRFVSGFNGQ 225
S W C V G + +
Sbjct: 402 STSSESSPSWFCSNVMGISKE 422
>gi|225444665|ref|XP_002277239.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
gi|297738532|emb|CBI27777.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 140/263 (53%), Gaps = 50/263 (19%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + L HTRG LV++M SS+I +ISN+T +SP T+HP C+N +K +T+L+P+
Sbjct: 198 WKKYRQKLLNHTRGPLVQIMWSSDI-VISNITLRDSPFWTLHPYDCKNVTIKNVTILAPI 256
Query: 63 -SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
APNTDG+DP DCYI G+ +A+KSGWD G+A RPS NI +R + +
Sbjct: 257 FEAPNTDGIDPDSCEDMVIEDCYISVGDDGIAIKSGWDQYGVAYGRPSVNILIRNLVIRS 316
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG----------------SYK----DRLRL 152
+GV IG EMSG + NVTV +L VW ++ +Y+ D +R+
Sbjct: 317 MVSAGVSIGSEMSGGVSNVTVENLLVWNSRRAVRIKTSPGRGGYVQHINYRNLTFDNVRV 376
Query: 153 --------YGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
HP +G+DPKA+P + ISF V + PV I G+ EEI +K V+
Sbjct: 377 GIVIKTDYNEHPDDGFDPKALPILEDISFTGVHG-QGVRVPVR--IHGS--EEIPVKKVT 431
Query: 205 LLVQAPSVKW------QCRFVSG 221
+ + + QC +V G
Sbjct: 432 FRDMSVGITYKKKHIFQCAYVEG 454
>gi|54290861|dbj|BAD61522.1| polygalacturonase-like [Oryza sativa Japonica Group]
Length = 261
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 118/224 (52%), Gaps = 38/224 (16%)
Query: 35 FCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP---------DCYIESGNGLVAV 85
F +SP IHPVYC N ++ +TVL+P +PNTDG+DP DCYI +G+ L+A+
Sbjct: 13 FQDSPFWNIHPVYCSNVVIRNVTVLAPHDSPNTDGIDPDSSSNVCIEDCYISTGDDLIAI 72
Query: 86 KSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG- 144
KSGWD G+A RPSS+I +RR++G++P +G +G E SG + +V HL+ + G
Sbjct: 73 KSGWDEYGMAYGRPSSHITIRRITGSSPF-AGFAVGSETSGGVEHVLAEHLNFFSSGFGI 131
Query: 145 -----------------------SYKDRLRLY----GHPKEGWDPKAIPKISGISFVNVV 177
S + LR+ GHP + +D A+P + G++ NV
Sbjct: 132 HIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGHPDDRYDRNALPVVDGLTIKNVQ 191
Query: 178 SVNTTKAPVLAGIIGTQFEEICMKNVSLLVQAPSVKWQCRFVSG 221
N +A + GI + F IC+ NV L A W+C VSG
Sbjct: 192 GQNIREAGSIKGIATSAFSRICLSNVKLNGGAAVRPWKCEAVSG 235
>gi|242044796|ref|XP_002460269.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
gi|241923646|gb|EER96790.1| hypothetical protein SORBIDRAFT_02g025730 [Sorghum bicolor]
Length = 518
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 137/264 (51%), Gaps = 54/264 (20%)
Query: 6 WW----NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
WW L HTRG LV+LM SS+I IISN+T +SP T+H C+N + T+L+P
Sbjct: 222 WWVKFRRKLLNHTRGPLVQLMRSSDI-IISNITLRDSPFWTLHTYDCKNVTISETTILAP 280
Query: 62 LS-APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
++ APNTDG+DPD CYI G+ +A+KSGWD GIA RPS+NI ++ V
Sbjct: 281 IAGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSANIVIQNVVIR 340
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG----------------SYKD------- 148
+ +GV IG EMSG + +V V ++ VW ++G Y++
Sbjct: 341 SMVSAGVSIGSEMSGGVSDVLVENVHVWDSRRGVRIKTAPGRGAYVTNIVYRNITLENVR 400
Query: 149 -----RLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
+ HP EG+DPKA+P I IS+ S++ + V I G+ EI +KNV
Sbjct: 401 VGIVIKTDYNEHPDEGFDPKAVPTIGNISY---TSIHGHRVRVPVRIQGS--AEIPVKNV 455
Query: 204 SL------LVQAPSVKWQCRFVSG 221
+ +V +QC FV G
Sbjct: 456 TFHDMSIGIVDKKHHVFQCSFVQG 479
>gi|255551873|ref|XP_002516982.1| Polygalacturonase, putative [Ricinus communis]
gi|223544070|gb|EEF45596.1| Polygalacturonase, putative [Ricinus communis]
Length = 454
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 135/259 (52%), Gaps = 41/259 (15%)
Query: 3 WDLWWNS-TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
WD W+NS +L ++R HLVE + S I ++SNLTF N+P+ IHPVYC N V+ M++ +P
Sbjct: 162 WD-WFNSHSLNYSRPHLVEFIESERI-VVSNLTFLNAPAYNIHPVYCSNVLVQNMSLSAP 219
Query: 62 LSAPNTDGLDPD-----CYIES----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
+P T G+ PD C ES G +++KSGWD GIA R + ++ +RRV +
Sbjct: 220 PESPQTIGIVPDSSNNVCIEESIIKMGYDAISLKSGWDEYGIAYDRATRDVHIRRVHLQS 279
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVW----------MQQQGSYKDRLRLYG-------- 154
+ S + G EMSG I NV V + ++ + +G Y R+ +
Sbjct: 280 SSGSSIAFGSEMSGGISNVHVEQVHLYNSFSGIGFRTTKGRGGYIKRIFISDVELENINL 339
Query: 155 ----------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
HP + +DPKA+P + I+ N+ N + A GI + F +C+ N++
Sbjct: 340 ALGAIGDHGLHPDDKFDPKAVPVVDQITLQNLTGTNISTAGNFTGIQDSPFTSLCLFNIT 399
Query: 205 LLVQAPSVKWQCRFVSGFN 223
L+V + S W C V G++
Sbjct: 400 LMVSS-SNSWTCSNVIGYS 417
>gi|414885630|tpg|DAA61644.1| TPA: hypothetical protein ZEAMMB73_326074 [Zea mays]
Length = 516
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 137/264 (51%), Gaps = 54/264 (20%)
Query: 6 WW----NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
WW L HTRG LV+LM SSNI IISN+T +SP T+H C+N + T+L+P
Sbjct: 220 WWVKFRRKLLNHTRGPLVQLMRSSNI-IISNITLRDSPFWTLHTYDCKNVTISETTILAP 278
Query: 62 LS-APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
++ APNTDG+DPD CYI G+ +A+KSGWD GIA RPS+NI ++ V
Sbjct: 279 IAGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSANITIQNVVIR 338
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGS----------------YKD------- 148
+ +GV IG EMSG + +V V ++ VW ++G Y++
Sbjct: 339 SMVSAGVSIGSEMSGGVSDVLVENVHVWDSRRGVRIKTAPGRGAYVTNVIYQNITFENVR 398
Query: 149 -----RLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
+ HP EG+DPKA+P I IS+ S++ + V I G+ +I +KNV
Sbjct: 399 VGIVIKTDYNEHPDEGFDPKAVPTIGNISY---TSIHGHRVRVPVRIQGS--AQIPVKNV 453
Query: 204 SL------LVQAPSVKWQCRFVSG 221
+ +V +QC FV G
Sbjct: 454 TFHDMSIGIVDKKHHVFQCSFVQG 477
>gi|222641659|gb|EEE69791.1| hypothetical protein OsJ_29512 [Oryza sativa Japonica Group]
Length = 426
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 138/263 (52%), Gaps = 50/263 (19%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + L HTRG LV+LM SSNI ISN+T +SP T+H C++ + T+L+P+
Sbjct: 131 WSKFRKKVLNHTRGPLVQLMRSSNI-TISNITLRDSPFWTLHIYDCKDVTISDTTILAPI 189
Query: 63 -SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
APNTDG+DPD CYI G+ +A+KSGWD GIA RPS+NI + V+ +
Sbjct: 190 VGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHNVTIRS 249
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG----------------SYKD-------- 148
+GV IG EMSG + NV V ++ +W ++G +Y++
Sbjct: 250 MVSAGVSIGSEMSGGVSNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRNITLEHIRV 309
Query: 149 ----RLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
+ HP EG+DPKA+P I IS+ ++ + + PV I G+ EI +KNV+
Sbjct: 310 GIVIKTDYNEHPDEGFDPKAVPIIENISYSSIHG-HGVRVPVR--IQGS--AEIPVKNVT 364
Query: 205 L------LVQAPSVKWQCRFVSG 221
LV + +QC FV G
Sbjct: 365 FHDMSVGLVDRKNHVFQCSFVQG 387
>gi|449500524|ref|XP_004161121.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 134/258 (51%), Gaps = 40/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + L HTRG LV++M S +IL ISN+T +SP T+HP C+N V+ +T+L+P+
Sbjct: 198 WKKYRQKLLNHTRGPLVQIMWSRDIL-ISNITLRDSPFWTLHPYDCKNITVRNVTILAPV 256
Query: 63 -SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
APNTDG+DP DCYI G+ +A+KSGWD GIA +PS NI +R V +
Sbjct: 257 HDAPNTDGIDPDSCEDMLIEDCYISVGDDGIAIKSGWDQYGIAYGQPSKNIRIRNVVLQS 316
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG----------------SYK----DRLRL 152
+G+ IG EMSG + +TV ++ VW ++G +Y+ D +R+
Sbjct: 317 MVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGYVQDITYRNLTLDTVRV 376
Query: 153 --------YGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
HP EG+DPKA+P + ISF ++ + G + K++S
Sbjct: 377 GIVIKTDYNEHPDEGYDPKALPVLKDISFTSIHGQGVRVPVRMHGSKDIPVRNVTFKDMS 436
Query: 205 L-LVQAPSVKWQCRFVSG 221
+ + +QC FV G
Sbjct: 437 VGITYKKKHIFQCAFVHG 454
>gi|115479361|ref|NP_001063274.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|51091349|dbj|BAD36084.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|51091399|dbj|BAD36142.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113631507|dbj|BAF25188.1| Os09g0439400 [Oryza sativa Japonica Group]
gi|215768243|dbj|BAH00472.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 526
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 138/263 (52%), Gaps = 50/263 (19%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + L HTRG LV+LM SSNI ISN+T +SP T+H C++ + T+L+P+
Sbjct: 231 WSKFRKKVLNHTRGPLVQLMRSSNI-TISNITLRDSPFWTLHIYDCKDVTISDTTILAPI 289
Query: 63 -SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
APNTDG+DPD CYI G+ +A+KSGWD GIA RPS+NI + V+ +
Sbjct: 290 VGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHNVTIRS 349
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG----------------SYKD-------- 148
+GV IG EMSG + NV V ++ +W ++G +Y++
Sbjct: 350 MVSAGVSIGSEMSGGVSNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRNITLEHIRV 409
Query: 149 ----RLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
+ HP EG+DPKA+P I IS+ ++ + + PV I G+ EI +KNV+
Sbjct: 410 GIVIKTDYNEHPDEGFDPKAVPIIENISYSSIHG-HGVRVPVR--IQGS--AEIPVKNVT 464
Query: 205 L------LVQAPSVKWQCRFVSG 221
LV + +QC FV G
Sbjct: 465 FHDMSVGLVDRKNHVFQCSFVQG 487
>gi|357158595|ref|XP_003578178.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 532
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/263 (36%), Positives = 136/263 (51%), Gaps = 50/263 (19%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + L HTRG LV+LM SSNI IISN+T +SP T+H C+N + T+L+P+
Sbjct: 237 WTKFRRKLLNHTRGPLVQLMRSSNI-IISNITLQDSPFWTLHTYDCKNVTISETTILAPI 295
Query: 63 -SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
APNTDG+DPD CYI G+ VA+KSGWD GIA RPS+NI +R V+ +
Sbjct: 296 VGAPNTDGIDPDSCENVMIQNCYISVGDDGVAIKSGWDQYGIAYGRPSTNITIRDVTIRS 355
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG----------------SYKD-------- 148
+GV IG EMSG + NV V ++ +W ++G Y++
Sbjct: 356 MVSAGVSIGSEMSGGVSNVLVENVHIWSSRRGVRIKTAPGRGAYVNNIVYRNITLENVRV 415
Query: 149 ----RLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
+ HP EG++PKA+P + IS+ S++ V I G+ EI +KNV+
Sbjct: 416 GIVIKTDYNEHPDEGFNPKAVPIVGNISY---TSIHGQGVRVPVRIQGS--AEIPVKNVT 470
Query: 205 L------LVQAPSVKWQCRFVSG 221
++ +QC +V G
Sbjct: 471 FHDMSVGILDKKHHVFQCSYVQG 493
>gi|218202213|gb|EEC84640.1| hypothetical protein OsI_31518 [Oryza sativa Indica Group]
Length = 526
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 138/263 (52%), Gaps = 50/263 (19%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + L HTRG LV+LM SSNI ISN+T +SP T+H C++ + T+L+P+
Sbjct: 231 WSKFRKKVLNHTRGPLVQLMRSSNI-TISNITLRDSPFWTLHIYDCKDVTISDTTILAPI 289
Query: 63 -SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
APNTDG+DPD CYI G+ +A+KSGWD GIA RPS+NI + V+ +
Sbjct: 290 VGAPNTDGIDPDSCENVVIKNCYISVGDDGIAIKSGWDQYGIAYGRPSTNIIIHNVTIRS 349
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG----------------SYKD-------- 148
+GV IG EMSG + NV V ++ +W ++G +Y++
Sbjct: 350 MVSAGVSIGSEMSGGVSNVLVENVHIWDSRRGVRIKTAPGRGAYVSNITYRNITLEHIRV 409
Query: 149 ----RLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
+ HP EG+DPKA+P I IS+ ++ + + PV I G+ EI +KNV+
Sbjct: 410 GIVIKTDYNEHPDEGFDPKAVPIIENISYSSIHG-HGVRVPVR--IQGS--AEIPVKNVT 464
Query: 205 L------LVQAPSVKWQCRFVSG 221
LV + +QC FV G
Sbjct: 465 FHDMSVGLVDRRNHVFQCSFVQG 487
>gi|449452594|ref|XP_004144044.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 493
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 134/258 (51%), Gaps = 40/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + L HTRG LV++M S +IL ISN+T +SP T+HP C+N ++ +T+L+P+
Sbjct: 198 WKKYRQKLLNHTRGPLVQIMWSRDIL-ISNITLRDSPFWTLHPYDCKNITIRNVTILAPV 256
Query: 63 -SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
APNTDG+DP DCYI G+ +A+KSGWD GIA +PS NI +R V +
Sbjct: 257 HDAPNTDGIDPDSCEDMLIEDCYISVGDDGIAIKSGWDQYGIAYGQPSKNIRIRNVVLQS 316
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG----------------SYK----DRLRL 152
+G+ IG EMSG + +TV ++ VW ++G +Y+ D +R+
Sbjct: 317 MVSAGISIGSEMSGGVSGITVENVVVWNSRRGVRIKTAPGRGGYVQDITYRNLTLDTVRV 376
Query: 153 --------YGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
HP EG+DPKA+P + ISF ++ + G + K++S
Sbjct: 377 GIVIKTDYNEHPDEGYDPKALPVLKDISFTSIHGQGVRVPVRMHGSKDIPVRNVTFKDMS 436
Query: 205 L-LVQAPSVKWQCRFVSG 221
+ + +QC FV G
Sbjct: 437 VGITYKKKHIFQCAFVHG 454
>gi|302823943|ref|XP_002993619.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
gi|300138547|gb|EFJ05311.1| hypothetical protein SELMODRAFT_137353 [Selaginella moellendorffii]
Length = 468
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/262 (36%), Positives = 135/262 (51%), Gaps = 51/262 (19%)
Query: 6 WWNST----LKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
WW LKHTRG L++LM S I IS++T NSP T+HP C N ++G+T+++P
Sbjct: 174 WWEKAKRKQLKHTRGRLIQLMWSRGIE-ISDVTLRNSPFWTVHPYDCENVTIRGVTIIAP 232
Query: 62 LSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
APNTDG+DPD CYI G+ VAVKSGWD GI +P +NI +R +
Sbjct: 233 PDAPNTDGIDPDSCRNVLIESCYISVGDDGVAVKSGWDQYGIDYGKPCANITIRNIQVNA 292
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGS----------------YK----DRLRL 152
P +GV IG EMSG I NVTV ++ +W ++G Y+ + +R+
Sbjct: 293 PVSAGVSIGSEMSGGITNVTVENVFIWNSKRGVRIKTTPGRGGYVTQVFYRNITMETVRV 352
Query: 153 -------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFE-----EIC 199
YG HP E +DP A+P + I F + ++ + A I G++ EI
Sbjct: 353 GIVIKTDYGDHPDEFYDPTALPVVEKIFFDGIYG---SEVRIPARIYGSKEVPVRGLEIR 409
Query: 200 MKNVSLLVQAPSVKWQCRFVSG 221
NV + + V +QC F+ G
Sbjct: 410 DMNVGVTRKKKHV-FQCSFLQG 430
>gi|212274809|ref|NP_001130359.1| uncharacterized protein LOC100191454 precursor [Zea mays]
gi|194688932|gb|ACF78550.1| unknown [Zea mays]
gi|413920257|gb|AFW60189.1| hypothetical protein ZEAMMB73_155387 [Zea mays]
Length = 458
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 136/262 (51%), Gaps = 44/262 (16%)
Query: 5 LWW----NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+WW + L H+R +L+E + S +I +ISNLTF NSP+ +IHPVYC N V +T+ +
Sbjct: 165 VWWQWLRSHELNHSRPNLLEFLYSEDI-VISNLTFLNSPAWSIHPVYCSNVKVHNVTIKT 223
Query: 61 PLSAPNTDGLDPD-----CYIES----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
L AP TDG+ PD C +S + +++KSGWD GI+ RP+S+I + RV
Sbjct: 224 SLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRPTSDIRISRVDLL 283
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG-SYKDR--------------------- 149
+ + + + G EMSG I ++ VNHL + +G S+K
Sbjct: 284 SSSGAALAFGSEMSGGISDIHVNHLRIHDSSKGISFKTSPGRGGYIEDVVISEVQMENVH 343
Query: 150 --LRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
+ G HP + +DP +P I ++ N+ N + A VL+GI G F IC+ N+
Sbjct: 344 VGIEFTGNCSTHPDDSFDPSDLPAIDHVTMKNMAGTNISVAGVLSGIEGAPFTAICLSNL 403
Query: 204 SLLVQAPS--VKWQCRFVSGFN 223
+ + A S W C VSG++
Sbjct: 404 NFSMAAGSGPSSWSCSDVSGYS 425
>gi|326532444|dbj|BAK05151.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 135/264 (51%), Gaps = 54/264 (20%)
Query: 6 WW----NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
WW L HTRG LV+LM SSNI IISN+T +SP T+H C+N + G T+L+P
Sbjct: 234 WWIKFRKKLLNHTRGPLVQLMRSSNI-IISNITLRDSPFWTLHVYDCKNVTISGTTILAP 292
Query: 62 L-SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
+ APNTDG+DPD CYI G+ VA+KSGWD GIA RPS+NI +R V
Sbjct: 293 IVGAPNTDGIDPDSCENVMIENCYISVGDDGVAIKSGWDQYGIAYGRPSTNITIRNVIIR 352
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG----------------SYKD------- 148
+ +GV IG EMSG + NV V ++ +W ++G Y++
Sbjct: 353 SMVSAGVSIGSEMSGGVSNVLVENVHIWSSRRGVRIKTAPGRGAYVNNIVYRNITLENVR 412
Query: 149 -----RLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
+ HP E +DPKA+P IS+ S++ + V I G+ EI ++NV
Sbjct: 413 VGIVIKTDYNEHPDELFDPKAVPVGGNISY---TSIHGQRVRVPVRIQGS--AEIPVRNV 467
Query: 204 SL------LVQAPSVKWQCRFVSG 221
+ ++ +QC FV G
Sbjct: 468 TFHDMSVGILDKKHHVFQCSFVQG 491
>gi|302783324|ref|XP_002973435.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
gi|300159188|gb|EFJ25809.1| hypothetical protein SELMODRAFT_99190 [Selaginella moellendorffii]
Length = 468
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/262 (35%), Positives = 134/262 (51%), Gaps = 51/262 (19%)
Query: 6 WWNST----LKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
WW LKHTRG L++ M S I IS++T NSP T+HP C N ++G+T+++P
Sbjct: 174 WWEKAKLKQLKHTRGRLIQFMWSRGIE-ISDVTLRNSPFWTVHPYDCENVTIRGVTIIAP 232
Query: 62 LSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
APNTDG+DPD CYI G+ VAVKSGWD GI +P +NI +R +
Sbjct: 233 PDAPNTDGIDPDSCRNVLIENCYISVGDDGVAVKSGWDQYGIDYGKPCANITIRNIQVNA 292
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGS----------------YK----DRLRL 152
P +GV IG EMSG I NVTV ++ +W ++G Y+ + +R+
Sbjct: 293 PVSAGVSIGSEMSGGITNVTVENVYIWNSKRGVRIKTTPGRGGYVTQVFYRNITMETVRV 352
Query: 153 -------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFE-----EIC 199
YG HP E +DP A+P + I F + ++ + A I G++ EI
Sbjct: 353 GIVIKTDYGDHPDEFYDPTALPVVEKIFFDGIYG---SEVRIPARIYGSKEVPVRGLEIR 409
Query: 200 MKNVSLLVQAPSVKWQCRFVSG 221
NV + + V +QC F+ G
Sbjct: 410 DMNVGVTRKKKHV-FQCSFLQG 430
>gi|91806548|gb|ABE66001.1| glycoside hydrolase family 28 protein/polygalacturonase family
protein [Arabidopsis thaliana]
Length = 416
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/230 (38%), Positives = 126/230 (54%), Gaps = 37/230 (16%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + K TR +L+E++ S NI I SN+T +SPS IHPVYC + VK +TVL+P+
Sbjct: 169 WDKFKKKQFKITRPYLIEILFSKNIQI-SNITLIDSPSWNIHPVYCNSVIVKSVTVLAPV 227
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+ PNTDG++P DCYI SG+ +AVKSGWD GI AV R
Sbjct: 228 TVPNTDGINPDSCTNTLIEDCYIVSGDDCIAVKSGWDQYGI-------KTAVGR------ 274
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISF 173
G + + RI T+ ++ WM G+Y HP EG+DPKA+P+I+ I++
Sbjct: 275 ---GAYVKDIYARRITMKTMKYV-FWM--SGNYG------SHPDEGFDPKALPEITNINY 322
Query: 174 VNVVSVNTTKAPVLAGIIGTQFEEICMKNVS--LLVQAPSVKWQCRFVSG 221
++ + N T + L GI F IC+ NV+ L +A ++W C V+G
Sbjct: 323 RDMTAENVTMSASLDGIDKDPFTGICISNVTIALAAKAKKMQWNCTDVAG 372
>gi|297844882|ref|XP_002890322.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336164|gb|EFH66581.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 506
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 141/263 (53%), Gaps = 50/263 (19%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + L +TRG LV++M SS+I +I+N+T +SP T+HP C+N ++ +T+L+P+
Sbjct: 211 WKKYQRRLLNYTRGPLVQIMWSSDI-VIANITMRDSPFWTLHPYDCKNVTIRNVTILAPV 269
Query: 63 S-APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
+ APNTDG+DPD CYI +G+ +A+KSGWD GIA RPS+NI +R + +
Sbjct: 270 TGAPNTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVRS 329
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG----------------SYK----DRLRL 152
+GV IG EMSG I NVT+ +L +W ++G +YK D +R+
Sbjct: 330 VISAGVSIGSEMSGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVRV 389
Query: 153 --------YGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
H + +D KA P +SG SF + + PV I G+ E+I ++NV+
Sbjct: 390 GIVIKTDYNEHADDNYDRKAYPILSGFSFAGIHG-QGVRVPVR--IHGS--EQIPVRNVT 444
Query: 205 L------LVQAPSVKWQCRFVSG 221
L +QC FV G
Sbjct: 445 FRDMSVGLTYKKKHIFQCSFVKG 467
>gi|449432886|ref|XP_004134229.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
Length = 457
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 128/261 (49%), Gaps = 43/261 (16%)
Query: 5 LWWN----STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+WWN +L ++R HLVE +S + ++SNLTF N+P+ IHPVYC N +V ++V +
Sbjct: 163 VWWNWFSSHSLNYSRPHLVEFEDSQYV-VVSNLTFLNTPAYNIHPVYCSNVYVYNISVSA 221
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P +P T G+ PD C I +G +A+KSGWD GIA RPS NI +RRV
Sbjct: 222 PSESPYTVGIVPDSSDHVCIEGCNIATGYDAIALKSGWDQYGIAYGRPSKNIHIRRVHLQ 281
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHL---------------------------DVWMQQQG 144
+ + S + G EMSG I NV V H+ DV M+
Sbjct: 282 SSSGSSIAFGSEMSGGISNVLVEHVQLNNSFIGIQIRTTKGRGGYIKGIVVSDVEMENIS 341
Query: 145 SYKDRLRLYG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN- 202
+ +G HP + +DP A+P + I+ NV N A +GI + F I + N
Sbjct: 342 TAFSASGHFGSHPDDEYDPNALPIVQDITLQNVRGTNIKIAGNFSGIQESPFTSIYLSNI 401
Query: 203 VSLLVQAPSVKWQCRFVSGFN 223
+ + S W C VSGF+
Sbjct: 402 TFSINSSSSTSWICSDVSGFS 422
>gi|449531087|ref|XP_004172519.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like,
partial [Cucumis sativus]
Length = 452
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 128/261 (49%), Gaps = 43/261 (16%)
Query: 5 LWWN----STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+WWN +L ++R HLVE +S + ++SNLTF N+P+ IHPVYC N +V ++V +
Sbjct: 158 VWWNWFSSHSLNYSRPHLVEFEDSQYV-VVSNLTFLNTPAYNIHPVYCSNVYVYNISVSA 216
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P +P T G+ PD C I +G +A+KSGWD GIA RPS NI +RRV
Sbjct: 217 PSESPYTVGIVPDSSDHVCIEGCNIATGYDAIALKSGWDQYGIAYGRPSKNIHIRRVHLQ 276
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHL---------------------------DVWMQQQG 144
+ + S + G EMSG I NV V H+ DV M+
Sbjct: 277 SSSGSSIAFGSEMSGGISNVLVEHVQLNNSFIGIQIRTTKGRGGYIKGIVVSDVEMENIS 336
Query: 145 SYKDRLRLYG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN- 202
+ +G HP + +DP A+P + I+ NV N A +GI + F I + N
Sbjct: 337 TAFSASGHFGSHPDDEYDPNALPIVQDITLQNVRGTNIKIAGNFSGIQESPFTSIYLSNI 396
Query: 203 VSLLVQAPSVKWQCRFVSGFN 223
+ + S W C VSGF+
Sbjct: 397 TFSINSSSSTSWICSDVSGFS 417
>gi|15221958|ref|NP_173351.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|332191692|gb|AEE29813.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 506
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 141/264 (53%), Gaps = 54/264 (20%)
Query: 6 WWNS----TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
WW L +TRG LV++M SS+I +I+N+T +SP T+HP C+N ++ +T+L+P
Sbjct: 210 WWKKHQRRLLNYTRGPLVQIMWSSDI-VIANITMRDSPFWTLHPYDCKNVTIRNVTILAP 268
Query: 62 LS-APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
++ APNTDG+DPD CYI +G+ +A+KSGWD GIA RPS+NI +R +
Sbjct: 269 VTGAPNTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVR 328
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG----------------SYK----DRLR 151
+ +GV IG EMSG I NVT+ +L +W ++G +YK D +R
Sbjct: 329 SVISAGVSIGSEMSGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVR 388
Query: 152 L--------YGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
+ H + +D KA P +SG SF + + PV I G+ E+I ++NV
Sbjct: 389 VGIVIKTDYNEHADDNYDRKAYPILSGFSFAGIHG-QGVRVPVR--IHGS--EQIPVRNV 443
Query: 204 SL------LVQAPSVKWQCRFVSG 221
+ L +QC FV G
Sbjct: 444 TFRDMSVGLTYKKKHIFQCSFVKG 467
>gi|19698861|gb|AAL91166.1| unknown protein [Arabidopsis thaliana]
gi|23197646|gb|AAN15350.1| unknown protein [Arabidopsis thaliana]
Length = 506
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 141/264 (53%), Gaps = 54/264 (20%)
Query: 6 WWNS----TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
WW L +TRG LV++M SS+I +I+N+T +SP T+HP C+N ++ +T+L+P
Sbjct: 210 WWKKHQRRLLNYTRGPLVQIMWSSDI-VIANITMRDSPFWTLHPYDCKNVTIRNVTILAP 268
Query: 62 LS-APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
++ APNTDG+DPD CYI +G+ +A+KSGWD GIA RPS+NI +R +
Sbjct: 269 VTGAPNTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVR 328
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG----------------SYK----DRLR 151
+ +GV IG EMSG I NVT+ +L +W ++G +YK D +R
Sbjct: 329 SVISAGVSIGSEMSGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVR 388
Query: 152 L--------YGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
+ H + +D KA P +SG SF + + PV I G+ E+I ++NV
Sbjct: 389 VGIVIKTDYNEHADDNYDRKAYPILSGFSFAGIHG-QGVRVPVR--IHGS--EQIPVRNV 443
Query: 204 SL------LVQAPSVKWQCRFVSG 221
+ L +QC FV G
Sbjct: 444 TFRDMSVGLTYKKKHIFQCSFVKG 467
>gi|357504351|ref|XP_003622464.1| Polygalacturonase-like protein [Medicago truncatula]
gi|355497479|gb|AES78682.1| Polygalacturonase-like protein [Medicago truncatula]
Length = 479
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 137/259 (52%), Gaps = 40/259 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + N LK+TR +L+ELM S NI I SNLT +SPS IHPVY N +KG+T+++P+
Sbjct: 178 WQQFHNKKLKYTRPYLIELMFSDNIQI-SNLTLLDSPSWNIHPVYSSNIIIKGITIIAPI 236
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG++PD CYI SG+ VAVKSGWD GI P+ + +RR++ +P
Sbjct: 237 RSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISP 296
Query: 114 TCSGVGIGREMSGRIFNVTVNHL----------------------DVWMQQQGSYKDRLR 151
+ + +G EMSG I +V + D+++++ + +
Sbjct: 297 YSATIALGSEMSGGIQDVRAEDITAVHTESGIRIKTAVGRGGYVKDIYVKKMTMHTMKWA 356
Query: 152 L-----YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
YG H + ++ A+P+I I + ++V+ N + A L GI F IC+ NV++
Sbjct: 357 FWITGNYGSHADKNYNHSALPEIKNIHYRDMVADNVSMAGNLEGISNDPFTGICISNVTI 416
Query: 206 LVQAPSVK--WQCRFVSGF 222
+ A + K W C + G
Sbjct: 417 TMAAKAKKQPWTCNDIEGI 435
>gi|8954055|gb|AAF82228.1|AC069143_4 Contains similarity to a polygalacturonase-like protein gi|7529266
from Arabidopsis thaliana BAC F18P9 gb|AL138654 and
contains multiple polygalacturonase (pectinase) PF|00295
domains [Arabidopsis thaliana]
Length = 533
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 141/264 (53%), Gaps = 54/264 (20%)
Query: 6 WWNS----TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
WW L +TRG LV++M SS+I +I+N+T +SP T+HP C+N ++ +T+L+P
Sbjct: 237 WWKKHQRRLLNYTRGPLVQIMWSSDI-VIANITMRDSPFWTLHPYDCKNVTIRNVTILAP 295
Query: 62 LS-APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
++ APNTDG+DPD CYI +G+ +A+KSGWD GIA RPS+NI +R +
Sbjct: 296 VTGAPNTDGIDPDSCEDMVIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVR 355
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG----------------SYK----DRLR 151
+ +GV IG EMSG I NVT+ +L +W ++G +YK D +R
Sbjct: 356 SVISAGVSIGSEMSGGISNVTIENLLIWNSRRGIRIKTAPGRGGYIRNITYKNLTLDNVR 415
Query: 152 L--------YGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
+ H + +D KA P +SG SF + + PV I G+ E+I ++NV
Sbjct: 416 VGIVIKTDYNEHADDNYDRKAYPILSGFSFAGIHG-QGVRVPVR--IHGS--EQIPVRNV 470
Query: 204 SL------LVQAPSVKWQCRFVSG 221
+ L +QC FV G
Sbjct: 471 TFRDMSVGLTYKKKHIFQCSFVKG 494
>gi|224077474|ref|XP_002305262.1| predicted protein [Populus trichocarpa]
gi|222848226|gb|EEE85773.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 133/260 (51%), Gaps = 42/260 (16%)
Query: 3 WDLWWNSTLKH-TRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
W+ + LK R +L+E+M S + I SN+T NSP +HP+Y N +++G+T+L+P
Sbjct: 138 WEKFNEKKLKKLERPYLIEIMYSDQVQI-SNITLINSPQWHVHPIYSSNLWIQGVTILAP 196
Query: 62 LSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
+ PNTDG++P DCYI SG+ +AVKSG D GI + P + +RR++ +
Sbjct: 197 VDVPNTDGINPDSCTNVIIEDCYIVSGDDCIAVKSGLDQYGIKVGMPMKQLVIRRITCIS 256
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQQ-----------GSYKD----RLRLY---- 153
P + + +G EMSG I +V + + + G KD R+ L
Sbjct: 257 PKSAAIALGSEMSGGIEDVRIEDITAINTESAVRVKTAVGRGGYVKDIFVRRMTLKTMKY 316
Query: 154 ---------GHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGI-IGTQFEEICMKNV 203
H EG+DPKA+P+I+ I+F ++ + N T L G+ G F IC+ NV
Sbjct: 317 VFWMIGSYSSHADEGYDPKALPEITNINFRDIAADNVTIPGKLEGLGEGNPFTGICISNV 376
Query: 204 SLLVQAPSVK--WQCRFVSG 221
++ + + W C VSG
Sbjct: 377 TMTLAEKHKEPAWNCTDVSG 396
>gi|413916538|gb|AFW56470.1| polygalacturonase [Zea mays]
Length = 458
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 131/262 (50%), Gaps = 45/262 (17%)
Query: 6 WWN----STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
WWN + L ++R HLVE ++S I +ISN+TF NSP+ +IHPVYC N V +T+ +
Sbjct: 163 WWNWFRSNKLNYSRPHLVEFVDSEQI-VISNITFLNSPAWSIHPVYCSNVVVHSVTIQTS 221
Query: 62 LSAPNTDGLDPD-----CYIES----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
L AP G+ PD C +S + +++KSGWD GIA RP+S+I + R+ +
Sbjct: 222 LDAPLNHGIVPDSCSNMCIEDSSISVSHDAISLKSGWDKQGIAFGRPTSDIHISRLDLQS 281
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYG------------------ 154
+ + G EMSG I ++ + L + +G + G
Sbjct: 282 SLGAALAFGSEMSGGISDIHADRLLIHSSSRGVFFKTAPGRGGYIRDTVISDVQMEDVDV 341
Query: 155 ----------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
HP + +DP A+P +S I+ N+ + A VL+GI G F +IC+ N++
Sbjct: 342 AIAFTGDWPSHPDDQFDPAALPVVSHITLKNMTGTRISVAGVLSGIAGDPFTDICLSNIN 401
Query: 205 LLV---QAPSVKWQCRFVSGFN 223
+ +P+ W C VSG++
Sbjct: 402 FSLADSASPTSHWSCSNVSGYS 423
>gi|242063272|ref|XP_002452925.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
gi|241932756|gb|EES05901.1| hypothetical protein SORBIDRAFT_04g035020 [Sorghum bicolor]
Length = 500
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 136/262 (51%), Gaps = 46/262 (17%)
Query: 4 DLWW----NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
++WW L +TR LV+LM S +I II+N+T NSP +HP C N V +T+L
Sbjct: 202 EVWWMKHRRRILNNTRPPLVQLMWSKDI-IIANITLRNSPFWHLHPYDCTNVTVSNVTIL 260
Query: 60 SPLS-APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVS 109
SP+S APNTDG+DPD CYI G+ +A+KSGWD GIA RPSSNI++R V+
Sbjct: 261 SPVSGAPNTDGIDPDSSQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSNISIRNVN 320
Query: 110 GTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG----------------SYKD----- 148
+ +G+ IG EMSG + NVTV ++ +W ++G SY++
Sbjct: 321 ARSLVSAGISIGSEMSGGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDN 380
Query: 149 -------RLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLA-GIIGTQFEEICM 200
++ H +G+D A P I+ ISF + + PV A G +I
Sbjct: 381 VRAGIVIKVDYNEHADDGYDRTAFPDITSISFKGIHG-RGVRVPVRAHGSDVIPIRDISF 439
Query: 201 KNVSLLVQAPSVK-WQCRFVSG 221
+++S+ + +QC +V G
Sbjct: 440 QDMSVGISYKKKHIFQCSYVEG 461
>gi|147795580|emb|CAN69988.1| hypothetical protein VITISV_024399 [Vitis vinifera]
Length = 509
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 140/279 (50%), Gaps = 66/279 (23%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + L HTRG LV++M SS+I +ISN+T +SP T+HP C+N +K +T+L+P+
Sbjct: 198 WKKYRQKLLNHTRGPLVQIMWSSDI-VISNITLRDSPFWTLHPYDCKNVTIKNVTILAPI 256
Query: 63 -SAPNTDGLDP-------------------------DCYIESGNGLVAVKSGWDHDGIAM 96
APNTDG+DP DCYI G+ +A+KSGWD G+A
Sbjct: 257 FEAPNTDGIDPGKVTCTLYYFSDCICPNSCEDMVIEDCYISVGDDGIAIKSGWDQYGVAY 316
Query: 97 ARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG------------ 144
RPS NI +R + + +GV IG EMSG + NVTV +L VW ++
Sbjct: 317 GRPSVNILIRNLVIRSMVSAGVSIGSEMSGGVSNVTVENLLVWNSRRAVRIKTSPGRGGY 376
Query: 145 ----SYK----DRLRL--------YGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLA 188
+Y+ D +R+ HP +G+DPKA+P + ISF V + PV
Sbjct: 377 VQHINYRNLTFDNVRVGIVIKTDYNEHPDDGFDPKALPILEDISFTGVHG-QGVRVPVR- 434
Query: 189 GIIGTQFEEICMKNVSLLVQAPSVKW------QCRFVSG 221
I G+ EEI +K V+ + + + QC +V G
Sbjct: 435 -IHGS--EEIPVKKVTFRDMSVGITYKKKHIFQCAYVEG 470
>gi|168021522|ref|XP_001763290.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685425|gb|EDQ71820.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 449
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 129/258 (50%), Gaps = 43/258 (16%)
Query: 6 WWNS----TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
WW L++TRG LVELM S+NI +IS++T NSP +HP C N + G+T+L+P
Sbjct: 159 WWEQHKQKRLRYTRGRLVELMWSTNI-VISDVTLQNSPFWHLHPYDCTNVTISGVTILAP 217
Query: 62 LSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
L APNTDG+DPD CYI G+ VAVKSGWD GI RP N+ +R V +
Sbjct: 218 LDAPNTDGIDPDSCKNVLVENCYISVGDDAVAVKSGWDKYGIEYNRPCVNVTIRNVIARS 277
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG----------------SYKDRLRL---- 152
+G+ IG EMSG + V V + +W ++G YK+ +
Sbjct: 278 QISAGISIGSEMSGGVEQVLVEDVYIWGSRRGIRIKTSPGRGGYVKNILYKNLTLIDVRV 337
Query: 153 -------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
YG HP +DPKA+P ++ ISF V + + G I ++N++
Sbjct: 338 GIVVKTDYGEHPDLDFDPKALPVVANISFDGVYGSSVRYPVRMFGSKEVPITGIDIRNMN 397
Query: 205 L-LVQAPSVKWQCRFVSG 221
+ L + + C F+ G
Sbjct: 398 VGLTRKKRNVFTCDFLQG 415
>gi|357137810|ref|XP_003570492.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 496
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 138/262 (52%), Gaps = 46/262 (17%)
Query: 4 DLWW----NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
++WW LK+TR LV+LM SS+I I++N+T NSP HP C N V +T+L
Sbjct: 198 EVWWLKHRRRMLKNTRPPLVQLMWSSDI-IVTNITLRNSPFWHFHPYDCTNVTVSNVTIL 256
Query: 60 SPLS-APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVS 109
+P+S APNTDG+DPD CYI G+ +AVKSGWD GIA RPSSNI +R V+
Sbjct: 257 APVSGAPNTDGIDPDSCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSSNILIRNVA 316
Query: 110 GTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG----------------SYKD----- 148
+ +G+ IG EMSG + NVTV ++ +W ++G SY++
Sbjct: 317 VRSLVSAGISIGSEMSGGVANVTVENVRIWDSRRGVRIKTATGRGGYIRNISYRNITFDN 376
Query: 149 -------RLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLA-GIIGTQFEEICM 200
++ H +G+D A P I+GISF + + PV A G +++
Sbjct: 377 VRAGIVIKVDYNEHADDGYDRNAFPDITGISFKEIHGWG-VRVPVRAHGSNIIPIKDVTF 435
Query: 201 KNVSLLVQAPSVK-WQCRFVSG 221
+++S+ + +QC ++ G
Sbjct: 436 QDMSVGISYKKKHIFQCSYIEG 457
>gi|226507254|ref|NP_001148987.1| polygalacturonase precursor [Zea mays]
gi|195623798|gb|ACG33729.1| polygalacturonase [Zea mays]
Length = 458
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 131/262 (50%), Gaps = 45/262 (17%)
Query: 6 WWN----STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
WWN + L ++R HLVE ++S I +ISN+TF NSP+ +IHPVYC N V +T+ +
Sbjct: 163 WWNWFRSNKLNYSRPHLVEFVDSEQI-VISNITFLNSPAWSIHPVYCSNVVVHSVTIQTS 221
Query: 62 LSAPNTDGLDPD-----CYIES----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
L AP G+ PD C +S + +++KSGWD GIA RP+S+I + R+ +
Sbjct: 222 LDAPLNHGIVPDSCSNMCIEDSSISVSHDAISLKSGWDKQGIAFGRPTSDIHISRLDLQS 281
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYG------------------ 154
+ + G EMSG I +V + L + +G + G
Sbjct: 282 SLGAALTFGSEMSGGISDVHADRLLIHSSFRGVFFKTAPGRGGYIRDTVISDVQMEDVDV 341
Query: 155 ----------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
HP + +DP A+P +S I+ N+ + A VL+GI G F +IC+ N++
Sbjct: 342 AIAFTGDWPSHPDDQFDPTALPVVSHITLKNMTGTRISVAGVLSGIAGDPFTDICLSNIN 401
Query: 205 LLV---QAPSVKWQCRFVSGFN 223
+ +P+ W C VSG++
Sbjct: 402 FSLADSASPTSHWSCSNVSGYS 423
>gi|108862809|gb|ABA99544.2| glycoside hydrolase family 28 protein, putative, expressed [Oryza
sativa Japonica Group]
gi|222617271|gb|EEE53403.1| hypothetical protein OsJ_36464 [Oryza sativa Japonica Group]
Length = 457
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 127/241 (52%), Gaps = 42/241 (17%)
Query: 6 WWN----STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
WWN + L ++R HLVE ++S +I +ISNLT NSP+ IHPV+C N V +T+ +
Sbjct: 165 WWNWFRSNKLNYSRPHLVEFVDSEDI-VISNLTLLNSPAWGIHPVFCSNVMVHDVTIRTS 223
Query: 62 LSAPNTDGLDPD-----CYIES----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
L AP TDG+ PD C +S + +++KSGWD+ GI + RP+S+I + RV
Sbjct: 224 LDAPLTDGIVPDSCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVDLQA 283
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG---------------------SYKD--- 148
+ + G EMSG I ++ V+HL++ +G +D
Sbjct: 284 SLGAALAFGSEMSGGISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQMEDVNV 343
Query: 149 RLRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
++ G HP +DP A+P I+ I+ N+V N + A VL+GI G F IC+ N+S
Sbjct: 344 AIKFTGDWSTHPDNHFDPSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNICLSNIS 403
Query: 205 L 205
Sbjct: 404 F 404
>gi|115489012|ref|NP_001066993.1| Os12g0554800 [Oryza sativa Japonica Group]
gi|113649500|dbj|BAF30012.1| Os12g0554800, partial [Oryza sativa Japonica Group]
Length = 424
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 127/241 (52%), Gaps = 42/241 (17%)
Query: 6 WWN----STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
WWN + L ++R HLVE ++S +I +ISNLT NSP+ IHPV+C N V +T+ +
Sbjct: 132 WWNWFRSNKLNYSRPHLVEFVDSEDI-VISNLTLLNSPAWGIHPVFCSNVMVHDVTIRTS 190
Query: 62 LSAPNTDGLDPD-----CYIES----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
L AP TDG+ PD C +S + +++KSGWD+ GI + RP+S+I + RV
Sbjct: 191 LDAPLTDGIVPDSCSNMCIEDSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVDLQA 250
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG---------------------SYKD--- 148
+ + G EMSG I ++ V+HL++ +G +D
Sbjct: 251 SLGAALAFGSEMSGGISDIHVDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQMEDVNV 310
Query: 149 RLRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
++ G HP +DP A+P I+ I+ N+V N + A VL+GI G F IC+ N+S
Sbjct: 311 AIKFTGDWSTHPDNHFDPSALPMINRITLKNMVGTNISVAGVLSGINGDPFTNICLSNIS 370
Query: 205 L 205
Sbjct: 371 F 371
>gi|125583899|gb|EAZ24830.1| hypothetical protein OsJ_08610 [Oryza sativa Japonica Group]
Length = 489
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 132/262 (50%), Gaps = 46/262 (17%)
Query: 4 DLWW----NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
++WW L +TR L++LM S +I I++N+T NSP HP C N V +T+L
Sbjct: 164 EVWWMKHRRRILNNTRPPLLQLMWSKDI-IVANITLKNSPFWHFHPYDCTNITVSNVTIL 222
Query: 60 SPLS-APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVS 109
+P+S APNTDG+DPD CYI G+ +AVKSGWD GIA RPS NI +R V
Sbjct: 223 APISSAPNTDGIDPDSCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVM 282
Query: 110 GTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG----------------SYKD----- 148
+ +G+ IG EMSG I NVTV + +W ++G SY++
Sbjct: 283 ARSLVSAGISIGSEMSGGIANVTVEDVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDN 342
Query: 149 -------RLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLA-GIIGTQFEEICM 200
++ H +G+D A P I+ ISF + + PV A G ++I
Sbjct: 343 VRAGIVIKVDYNEHADDGYDRDAFPDITNISFKEIHG-RGVRVPVRAHGSSDIPIKDISF 401
Query: 201 KNVSLLVQAPSVK-WQCRFVSG 221
+++S+ + +QC F+ G
Sbjct: 402 QDMSIGISYKKKHIFQCSFIEG 423
>gi|125541363|gb|EAY87758.1| hypothetical protein OsI_09176 [Oryza sativa Indica Group]
Length = 545
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 132/262 (50%), Gaps = 46/262 (17%)
Query: 4 DLWW----NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
++WW L +TR L++LM S +I I++N+T NSP HP C N V +T+L
Sbjct: 220 EVWWMKHRRRILNNTRPPLLQLMWSKDI-IVANITLKNSPFWHFHPYDCTNITVSNVTIL 278
Query: 60 SPLS-APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVS 109
+P+S APNTDG+DPD CYI G+ +AVKSGWD GIA RPS NI +R V
Sbjct: 279 APISSAPNTDGIDPDSCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVM 338
Query: 110 GTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG----------------SYKD----- 148
+ +G+ IG EMSG I NVTV + +W ++G SY++
Sbjct: 339 ARSLVSAGISIGSEMSGGIANVTVEDVRIWESRRGLRIKTAIGRGGYIHDISYRNITFDN 398
Query: 149 -------RLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLA-GIIGTQFEEICM 200
++ H +G+D A P I+ ISF + + PV A G ++I
Sbjct: 399 VRAGIVIKVDYNEHADDGYDRDAFPDITNISFKEIHG-RGVRVPVRAHGSSDIPIKDISF 457
Query: 201 KNVSLLVQAPSVK-WQCRFVSG 221
+++S+ + +QC F+ G
Sbjct: 458 QDMSIGISYKKKHIFQCSFIEG 479
>gi|356534963|ref|XP_003536020.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 456
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 121/240 (50%), Gaps = 38/240 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WDL +L ++R H++EL+ S NI ISNLTF NSP+ +IHPVYC N ++ +TV +P
Sbjct: 163 WDLIGTHSLNYSRPHIIELVGSDNI-TISNLTFLNSPAWSIHPVYCSNVQIQKITVHAPT 221
Query: 63 SAPNTDGLDPDCY---------IESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
P T G+ PD I +G+ + +KSGWD G+A +P+S + +R V +
Sbjct: 222 EFPYTSGIVPDSSEHVCIYNSNISTGHDAIVLKSGWDQYGVAYGKPTSKVHIRGVYLQSS 281
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDV----------WMQQQGSYKDRL--------RLY-- 153
+ +G+ G EMSG I ++ L + + +G Y + +Y
Sbjct: 282 SGAGLAFGSEMSGGISDIIAEQLHITNSTIGIELKTTKGRGGYMKNIFISDAKLENIYLG 341
Query: 154 --------GHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
HP + +DP A+P + ++F NV+ N A +GI+ + F IC+ N +
Sbjct: 342 ISMTGSSGSHPDDKYDPNAVPDVGNVTFENVIGTNIAIAGNFSGIVDSPFTPICLLNATF 401
>gi|413949760|gb|AFW82409.1| hypothetical protein ZEAMMB73_244455 [Zea mays]
Length = 313
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 90/138 (65%), Gaps = 10/138 (7%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + LK RGHL+EL+ S NI IISN+TF N+P +HP YC N + G+T+L+P+
Sbjct: 78 WDKFHAKELKFIRGHLLELLYSENI-IISNVTFVNAPYWNLHPTYCTNVTISGVTILAPV 136
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
++PNTDG+DP DCYI SG+ VAVKSGWD GI PS +I ++R++ +P
Sbjct: 137 NSPNTDGIDPKSSSRVKIEDCYIVSGDDCVAVKSGWDEYGIRFNMPSQHIVIQRLTSVSP 196
Query: 114 TCSGVGIGREMSGRIFNV 131
T + + + EMSG I +V
Sbjct: 197 TSAMIALSSEMSGGIRDV 214
>gi|226492991|ref|NP_001140630.1| uncharacterized protein LOC100272705 [Zea mays]
gi|194700250|gb|ACF84209.1| unknown [Zea mays]
gi|413924334|gb|AFW64266.1| hypothetical protein ZEAMMB73_686606 [Zea mays]
Length = 495
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 136/262 (51%), Gaps = 46/262 (17%)
Query: 4 DLWW----NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
++WW L +TR LV+LM S +I I++N+T NSP +HP C N V +T++
Sbjct: 197 EVWWMKHRRRILNNTRPPLVQLMWSKDI-IVANITLRNSPFWHLHPYDCTNVTVSNVTIM 255
Query: 60 SPLS-APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVS 109
SP+S APNTDG+DPD CYI G+ +A+KSGWD GIA RPSS+I +R V+
Sbjct: 256 SPVSGAPNTDGIDPDSCQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSDILIRNVT 315
Query: 110 GTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG----------------SYKD----- 148
+ +G+ IG EMSG + NVTV ++ +W ++G SY++
Sbjct: 316 ARSLVSAGISIGSEMSGGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISYRNITFDN 375
Query: 149 -------RLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLA-GIIGTQFEEICM 200
++ H +G+D A P I+ ISF + + PV A G ++I
Sbjct: 376 VRAGIVIKVDYNEHADDGYDRTAFPDITSISFKGIHG-QGVRVPVRAHGSDVIPIKDISF 434
Query: 201 KNVSLLVQAPSVK-WQCRFVSG 221
+++S+ + +QC ++ G
Sbjct: 435 QDMSVGISYKKKHIFQCSYLEG 456
>gi|326517826|dbj|BAK03831.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520253|dbj|BAK07385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 495
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 135/262 (51%), Gaps = 46/262 (17%)
Query: 4 DLWW----NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
++WW LK+TR LV+LM S +I +++N+T NSP HP C N V +T+L
Sbjct: 197 EVWWLKHRRRMLKNTRPPLVQLMWSKDI-VVTNITLRNSPFWHFHPYDCTNVTVSNVTIL 255
Query: 60 SPLS-APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVS 109
SP+S APNTDG+DPD CYI G+ +A+KSGWD GIA R SSNI +R V+
Sbjct: 256 SPISGAPNTDGIDPDSCEDVLIENCYISVGDDAIAIKSGWDQYGIAYGRSSSNILIRNVT 315
Query: 110 GTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG----------------SYKD----- 148
+ +G+ IG EMSG + N+TV ++ +W ++G SY +
Sbjct: 316 VRSLVSAGISIGSEMSGGVANITVENVHIWDSRRGVRIKTAIGRGGYIRNISYSNITFDN 375
Query: 149 -------RLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLA-GIIGTQFEEICM 200
++ H +G+D A P I+GISF + + PV A G ++I
Sbjct: 376 VRAGIVIKVDYNEHADDGYDRNAFPDITGISFKKIHG-RGVRVPVRAHGSNYIPIKDITF 434
Query: 201 KNVSLLVQAPSVK-WQCRFVSG 221
+++S+ + +QC ++ G
Sbjct: 435 QDMSVGISYKKKHIFQCSYIEG 456
>gi|356570982|ref|XP_003553661.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 527
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 127/259 (49%), Gaps = 39/259 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W L+ +++L +TR +L+E ++S ++ IISNLTF +SP+ IHPVYC N ++ +T +P
Sbjct: 226 WKLFNSNSLNYTRPNLIEFVDSVDV-IISNLTFLDSPAWGIHPVYCSNVQIQNITYRAPA 284
Query: 63 SAPNTDGLDPDCY---------IESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
P T G+ PD I +G+ + +KSGWD GIA +P+SN+ + V +
Sbjct: 285 EFPYTSGIVPDSSQNVCIENSNISTGHDAIVLKSGWDQYGIAYGKPTSNVHISNVYLQSS 344
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYG------------------- 154
+ +G+ G EMSG I + L + G R G
Sbjct: 345 SGAGLAFGSEMSGGISVIIAEKLHILNSPIGIELKTTRGRGGYMRGIFISDAELENISLG 404
Query: 155 ---------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
HP + +D ++P + I+F NV+ N + A +GI+ + F IC+ NV+
Sbjct: 405 ISMTGYSGFHPDDKYDTSSLPVVGDITFKNVIGANISVAGNFSGIVESPFSTICLSNVTF 464
Query: 206 -LVQAPSVKWQCRFVSGFN 223
L PS W C V GF+
Sbjct: 465 SLSSEPSPSWFCSNVIGFS 483
>gi|357151266|ref|XP_003575734.1| PREDICTED: probable polygalacturonase-like [Brachypodium
distachyon]
Length = 457
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 122/242 (50%), Gaps = 38/242 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + L H+R HLVE ++S I +ISNLTF NSP+ +IHPVYC V +T+ +
Sbjct: 166 WDWLHSHELNHSRPHLVEFLHSEEI-VISNLTFLNSPAWSIHPVYCSKVKVHNVTIKTSS 224
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
AP TDG+ P D I + +++KSGWD GI++ +P+S+I + R+
Sbjct: 225 DAPLTDGIVPDSSSNVVIEDSTISVSHDAISIKSGWDKYGISIGKPASDIHISRMDLQAS 284
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQ----------GSYKDRLRL----------- 152
+ + + G EMSG I ++ +++ + + G Y D + +
Sbjct: 285 SGAALAFGSEMSGGISDIHADNIQIHGSNKGISFKTTPGRGGYIDEVVISDVKMDDVIVA 344
Query: 153 -------YGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
HP E +DP +P I I+ ++V N + A VL+GI G F IC+ NV+
Sbjct: 345 IEFTGNWSSHPDEDFDPSQLPVIGQITLKDMVGTNISVAGVLSGIDGDPFTAICLSNVNF 404
Query: 206 LV 207
L+
Sbjct: 405 LM 406
>gi|356503915|ref|XP_003520745.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 497
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 132/259 (50%), Gaps = 39/259 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W+L+ +++L ++R +L+E ++S +I IISNLTF +SP+ IHPV+C N ++ +T +P
Sbjct: 181 WELFSSNSLNYSRPNLIEFVDSVDI-IISNLTFLDSPAWGIHPVHCSNVQIQNITSRAPA 239
Query: 63 SAPNTDGLDPDCY---------IESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
P T G+ PD I +G+ V +KSGWD GIA +P+S++ + V +
Sbjct: 240 EFPYTSGIVPDSSRYVCIENSNISTGHDAVVLKSGWDQYGIAYGKPTSSVHISNVYLQSS 299
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVW----------MQQQGSYKDRLRLYG--------- 154
+ +G+ G EMSG I ++ L + + +G Y + +
Sbjct: 300 SGAGLAFGSEMSGGISDIIAEKLHILNSPIGIELKTTKGRGGYMRGIFISDAELENISLG 359
Query: 155 ---------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
HP + +D A+P + I+F NV+ N + A +GI+ + F IC+ NV+
Sbjct: 360 ISMTGYSGFHPDDKYDTSALPIVGDITFKNVIGANISVAGNFSGIVESPFSTICLSNVTF 419
Query: 206 -LVQAPSVKWQCRFVSGFN 223
L PS W C V GF+
Sbjct: 420 SLSSEPSPSWFCSNVIGFS 438
>gi|242071887|ref|XP_002451220.1| hypothetical protein SORBIDRAFT_05g025980 [Sorghum bicolor]
gi|241937063|gb|EES10208.1| hypothetical protein SORBIDRAFT_05g025980 [Sorghum bicolor]
Length = 448
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 127/246 (51%), Gaps = 42/246 (17%)
Query: 5 LWW----NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+WW + L H+R HL+E + S +I +ISNLTF NSP+ +IHPVYC N V +T+ +
Sbjct: 155 VWWQWLLSHELNHSRPHLLEFLYSEDI-VISNLTFLNSPAWSIHPVYCSNVKVHNVTIET 213
Query: 61 PLSAPNTDGLDPD-----CYIES----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
L AP TDG+ PD C +S + +++KSGWD GI+ RP+S+I + RV
Sbjct: 214 SLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDKYGISFGRPTSDIHISRVDLL 273
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG-SYKDR--------------------- 149
+ + + + G EMSG I ++ VNHL + +G S+K
Sbjct: 274 SSSGAALAFGSEMSGGISDIHVNHLRIHDSYKGISFKTSPGRGGYIEEVIISEVQMENVH 333
Query: 150 --LRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
+ G HP + +D +P I ++ N+V N + A VL+GI F IC+ N+
Sbjct: 334 VGIEFTGNCSTHPDDSFDLSDLPTIDQVTMKNMVGTNISVAGVLSGIDNAPFTAICLSNL 393
Query: 204 SLLVQA 209
+ + A
Sbjct: 394 NFSMAA 399
>gi|297600007|ref|NP_001048308.2| Os02g0781000 [Oryza sativa Japonica Group]
gi|255671294|dbj|BAF10222.2| Os02g0781000, partial [Oryza sativa Japonica Group]
Length = 285
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 126/248 (50%), Gaps = 42/248 (16%)
Query: 14 TRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS-APNTDGLDP 72
TR L++LM S +I I++N+T NSP HP C N V +T+L+P+S APNTDG+DP
Sbjct: 1 TRPPLLQLMWSKDI-IVANITLKNSPFWHFHPYDCTNITVSNVTILAPISSAPNTDGIDP 59
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
D CYI G+ +AVKSGWD GIA RPS NI +R V + +G+ IG E
Sbjct: 60 DSCQDVLIENCYISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSE 119
Query: 124 MSGRIFNVTVNHLDVWMQQQG----------------SYKD------------RLRLYGH 155
MSG I NVTV + +W ++G SY++ ++ H
Sbjct: 120 MSGGIANVTVEDVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIKVDYNEH 179
Query: 156 PKEGWDPKAIPKISGISFVNVVSVNTTKAPVLA-GIIGTQFEEICMKNVSLLVQAPSVK- 213
+G+D A P I+ ISF + + PV A G ++I +++S+ +
Sbjct: 180 ADDGYDRDAFPDITNISFKEIHG-RGVRVPVRAHGSSDIPIKDISFQDMSIGISYKKKHI 238
Query: 214 WQCRFVSG 221
+QC F+ G
Sbjct: 239 FQCSFIEG 246
>gi|219887583|gb|ACL54166.1| unknown [Zea mays]
Length = 463
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 91/135 (67%), Gaps = 10/135 (7%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
M W + + LK+TRG+L+ELM+S I ISNLT NSP+ IHPVY N V+G+T+L+
Sbjct: 175 MWWSKFHKNQLKYTRGYLIELMHSDTIY-ISNLTLLNSPAWNIHPVYSSNIVVQGITILA 233
Query: 61 PLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P ++PNTDG++P DCYI SG+ VA+KSGWD GI+ PS +I +RR++
Sbjct: 234 PTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCV 293
Query: 112 TPTCSGVGIGREMSG 126
+PT + + +G EMSG
Sbjct: 294 SPTSAVIALGSEMSG 308
>gi|125571200|gb|EAZ12715.1| hypothetical protein OsJ_02632 [Oryza sativa Japonica Group]
Length = 419
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 125/247 (50%), Gaps = 47/247 (19%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD+W TL TR HL+ELMNSS++++ + F +SP IHPVYC
Sbjct: 166 WDMWKKGTLPFTRPHLLELMNSSDVVVSNV-VFQDSPFWNIHPVYC-------------- 210
Query: 63 SAPNTDGLDPDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGR 122
+++ DCYI +G+ L+A+KSGWD G+A RPSS+I +RR++G++P +G +G
Sbjct: 211 ---SSNVCIEDCYISTGDDLIAIKSGWDEYGMAYGRPSSHITIRRITGSSP-FAGFAVGS 266
Query: 123 EMSGRIFNVTVNHLDVWMQQQG------------------------SYKDRLRLY----G 154
E SG + +V HL+ + G S + LR+ G
Sbjct: 267 ETSGGVEHVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGG 326
Query: 155 HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLVQAPSVKW 214
HP + +D A+P + G++ NV N +A + GI + F IC+ NV L A W
Sbjct: 327 HPDDRYDRNALPVVDGLTIKNVQGQNIREAGSIKGIATSAFSRICLSNVKLNGGAAVRPW 386
Query: 215 QCRFVSG 221
+C VSG
Sbjct: 387 KCEAVSG 393
>gi|297818750|ref|XP_002877258.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297323096|gb|EFH53517.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 134/263 (50%), Gaps = 50/263 (19%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP- 61
W + L HTRG LV++M SS+I + +N+T +SP T+HP C+N + MT+L+P
Sbjct: 192 WKKYRQKLLNHTRGPLVQIMWSSDI-VFANITLRDSPFWTLHPYDCKNVTITNMTILAPV 250
Query: 62 LSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
APNTDG+DPD YI G+ +A+KSGWD G RPS NI +R + +
Sbjct: 251 FEAPNTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGRPSKNILIRNLIIRS 310
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG----------------SYK----DRLRL 152
+G+ IG EMSG + N+TV ++ +W ++G +++ D LR+
Sbjct: 311 MVSAGISIGSEMSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELRV 370
Query: 153 --------YGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
HP G++P+A P + I++ + + PV I G++ EI +KNV+
Sbjct: 371 GIVIKTDYNEHPDGGFNPQAFPILENINYTGIYG-QGVRVPVR--IQGSK--EIPVKNVT 425
Query: 205 LLVQAPSVKW------QCRFVSG 221
+ + + QC +V G
Sbjct: 426 FRDMSVGITYKKKHIFQCAYVEG 448
>gi|320166922|gb|EFW43821.1| polygalacturonase [Capsaspora owczarzaki ATCC 30864]
Length = 448
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 121/257 (47%), Gaps = 43/257 (16%)
Query: 6 WWN----STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
WW S L +TRGHLVELM +++I+++ N+ NSP TIHP N V +T+ +P
Sbjct: 178 WWAAHRASNLTYTRGHLVELMYTTDIMLV-NVELRNSPFWTIHPYSSTNVLVSNVTINNP 236
Query: 62 LSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
L +PNTDG DPD C G+ +AVKSGWD+ GI P++++ +R ++ T
Sbjct: 237 LDSPNTDGCDPDSCNQVVIQNCVFTVGDDCIAVKSGWDNPGIQYGVPTTDVVIRNMTMHT 296
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVW----------MQQQGSYKDRLRLYG-------- 154
PT + + IG EMSG + N+ + + + +G Y L G
Sbjct: 297 PTSAAIAIGSEMSGGVSNLLAQDIRAFNCSSGIRLKSARGRGGYLRNLTFDGVTLNDVKT 356
Query: 155 ----------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
H +DP A+P I I N+V T G+ + + + NVS
Sbjct: 357 ALSINDFYGQHESIFYDPLAVPIIDSIFMSNIVGTAITIPGDFQGLFDAKITNVAISNVS 416
Query: 205 LLVQAPSVKWQCRFVSG 221
L V S + C + +G
Sbjct: 417 LAVVG-SGSYTCSYATG 432
>gi|79330402|ref|NP_001032043.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|110739511|dbj|BAF01664.1| hypothetical protein [Arabidopsis thaliana]
gi|332008402|gb|AED95785.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 447
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 131/259 (50%), Gaps = 41/259 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + + +L+++R HLVE +++ N+ I+SNLTF N+P+ TIH VYCRN ++ +T +
Sbjct: 164 WDRFNSHSLEYSRPHLVEFVSAENV-IVSNLTFLNAPAYTIHSVYCRNLYIHRVTANTCP 222
Query: 63 SAPNTDGLDPD-----CYIES----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+P T G+ PD C ES G +++KSG D G++ ARP++N+ +R V
Sbjct: 223 ESPYTIGIVPDSSENVCIQESSINMGYDAISLKSGCDEYGLSYARPTANVQIRNVYLRAA 282
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVW----------MQQQGSYKDRLRL----------- 152
+ S + G EMSG I +V V+ + +G Y + +
Sbjct: 283 SGSSISFGSEMSGGISDVEVSDAHIHNSLSGIAFRTTNGRGGYIKEIDISNIHMVNVGTA 342
Query: 153 ------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
+G HP G+D A P +S I ++V N + A G + F I + N+SL
Sbjct: 343 FLANGSFGTHPDSGFDENAYPLVSHIRLHDIVGENISTAGYFFGTKESPFTSILLSNISL 402
Query: 206 LVQ---APSVKWQCRFVSG 221
++ +P+ WQC +V G
Sbjct: 403 SIKNSASPADSWQCSYVDG 421
>gi|22327662|ref|NP_680409.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|20258821|gb|AAM14020.1| unknown protein [Arabidopsis thaliana]
gi|22136814|gb|AAM91751.1| unknown protein [Arabidopsis thaliana]
gi|332008401|gb|AED95784.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 131/259 (50%), Gaps = 41/259 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + + +L+++R HLVE +++ N+ I+SNLTF N+P+ TIH VYCRN ++ +T +
Sbjct: 166 WDRFNSHSLEYSRPHLVEFVSAENV-IVSNLTFLNAPAYTIHSVYCRNLYIHRVTANTCP 224
Query: 63 SAPNTDGLDPD-----CYIES----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+P T G+ PD C ES G +++KSG D G++ ARP++N+ +R V
Sbjct: 225 ESPYTIGIVPDSSENVCIQESSINMGYDAISLKSGCDEYGLSYARPTANVQIRNVYLRAA 284
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVW----------MQQQGSYKDRLRL----------- 152
+ S + G EMSG I +V V+ + +G Y + +
Sbjct: 285 SGSSISFGSEMSGGISDVEVSDAHIHNSLSGIAFRTTNGRGGYIKEIDISNIHMVNVGTA 344
Query: 153 ------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
+G HP G+D A P +S I ++V N + A G + F I + N+SL
Sbjct: 345 FLANGSFGTHPDSGFDENAYPLVSHIRLHDIVGENISTAGYFFGTKESPFTSILLSNISL 404
Query: 206 LVQ---APSVKWQCRFVSG 221
++ +P+ WQC +V G
Sbjct: 405 SIKNSASPADSWQCSYVDG 423
>gi|129771144|gb|ABO31369.1| polygalacturonase [Gossypium hirsutum]
Length = 219
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 94/146 (64%), Gaps = 11/146 (7%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W++W L TR +LVE MNS I IISN+ F NSP I PVYC N ++ +T+L+P
Sbjct: 31 WNMWRQGNLPFTRPNLVEFMNSRGI-IISNVIFKNSPFWNIPPVYCSNVVIRYVTILAPT 89
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DP D +I +G+ LVAVKSGWD GI RPSS+I +RRV+G++P
Sbjct: 90 DSPNTDGIDPDSSSNVCIEDSFISTGDDLVAVKSGWDEYGIGYGRPSSHITIRRVTGSSP 149
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVW 139
+G+ +G E SG + +V ++ ++
Sbjct: 150 -FAGIAVGSETSGGVEHVLAENIVIY 174
>gi|15229188|ref|NP_189881.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|7529266|emb|CAB86682.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|15215709|gb|AAK91400.1| AT3g42950/F18P9_110 [Arabidopsis thaliana]
gi|332644239|gb|AEE77760.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 484
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 134/263 (50%), Gaps = 50/263 (19%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP- 61
W + L HTRG LV++M SS+I + +N+T +SP T+HP C+N + MT+L+P
Sbjct: 189 WKKYRQKLLNHTRGPLVQIMWSSDI-VFANITLRDSPFWTLHPYDCKNVTITNMTILAPV 247
Query: 62 LSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
APNTDG+DPD YI G+ +A+KSGWD G +PS NI +R + +
Sbjct: 248 FEAPNTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILIRNLIIRS 307
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG----------------SYK----DRLRL 152
+G+ IG EMSG + N+TV ++ +W ++G +++ D LR+
Sbjct: 308 MVSAGISIGSEMSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELRV 367
Query: 153 --------YGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
HP G++P+A P + I++ + + PV I G++ EI +KNV+
Sbjct: 368 GIVIKTDYNEHPDGGFNPQAFPILENINYTGIYG-QGVRVPVR--IQGSK--EIPVKNVT 422
Query: 205 LLVQAPSVKW------QCRFVSG 221
+ + + QC +V G
Sbjct: 423 FRDMSVGITYKKKHIFQCAYVEG 445
>gi|297792177|ref|XP_002863973.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
gi|297309808|gb|EFH40232.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
Length = 447
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 129/259 (49%), Gaps = 41/259 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + + +L+++R HLVE ++S N+ I+SNLTF N+P+ TIH VYC N ++ +T +
Sbjct: 164 WDRFNSHSLEYSRPHLVEFVSSGNV-IVSNLTFLNAPAYTIHSVYCSNLYIHRVTANTSP 222
Query: 63 SAPNTDGLDPD-----CYIES----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+P T G+ PD C +S G +++KSGWD GI+ ARP++N+ ++ V
Sbjct: 223 ESPYTIGIVPDSSENVCIQDSSINMGYDAISLKSGWDEYGISYARPTANVQIKNVYLGAA 282
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVW----------MQQQGSYKDRLRL----------- 152
+ S + G EMSG I +V V + +G Y + +
Sbjct: 283 SGSSISFGSEMSGGISDVEVRDAHIHNSLSGISFRTTNGRGGYIKEIDISNIHMVNVGTA 342
Query: 153 ------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
+G HP G+D A P +S I ++ N + A G + F I + N+SL
Sbjct: 343 FLANGSFGTHPDSGFDANAFPLVSHIRLHDIAGENISTAGYFFGTEESPFTSILLSNISL 402
Query: 206 LVQ---APSVKWQCRFVSG 221
++ +P+ WQC +V G
Sbjct: 403 SIKNSDSPADFWQCSYVDG 421
>gi|47497401|dbj|BAD19438.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 277
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 118/237 (49%), Gaps = 41/237 (17%)
Query: 25 SNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS-APNTDGLDPD---------C 74
S +I++N+T NSP HP C N V +T+L+P+S APNTDG+DPD C
Sbjct: 3 SKDIIVANITLKNSPFWHFHPYDCTNITVSNVTILAPISSAPNTDGIDPDSCQDVLIENC 62
Query: 75 YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVN 134
YI G+ +AVKSGWD GIA RPS NI +R V + +G+ IG EMSG I NVTV
Sbjct: 63 YISVGDDAIAVKSGWDQYGIAYGRPSRNIVIRNVMARSLVSAGISIGSEMSGGIANVTVE 122
Query: 135 HLDVWMQQQG----------------SYKD------------RLRLYGHPKEGWDPKAIP 166
+ +W ++G SY++ ++ H +G+D A P
Sbjct: 123 DVRIWESRRGLRIKTAIGRGGYIRDISYRNITFDNVRAGIVIKVDYNEHADDGYDRDAFP 182
Query: 167 KISGISFVNVVSVNTTKAPVLA-GIIGTQFEEICMKNVSLLVQAPSVK-WQCRFVSG 221
I+ ISF + + PV A G ++I +++S+ + +QC F+ G
Sbjct: 183 DITNISFKEIHG-RGVRVPVRAHGSSDIPIKDISFQDMSIGISYKKKHIFQCSFIEG 238
>gi|23506093|gb|AAN28906.1| At3g42950/F18P9_110 [Arabidopsis thaliana]
Length = 484
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 133/263 (50%), Gaps = 50/263 (19%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP- 61
W + L HTRG L ++M SS+I + +N+T +SP T+HP C+N + MT+L+P
Sbjct: 189 WKKYRQKLLNHTRGPLAQIMWSSDI-VFANITLRDSPFWTLHPYDCKNVTITNMTILAPV 247
Query: 62 LSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
APNTDG+DPD YI G+ +A+KSGWD G +PS NI +R + +
Sbjct: 248 FEAPNTDGIDPDSCEDMLIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILIRNLIIRS 307
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG----------------SYK----DRLRL 152
+G+ IG EMSG + N+TV ++ +W ++G +++ D LR+
Sbjct: 308 MVSAGISIGSEMSGGVSNITVENILIWSSRRGVRIKTAPGRGGYVRDITFRNVTLDELRV 367
Query: 153 --------YGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVS 204
HP G++P+A P + I++ + + PV I G++ EI +KNV+
Sbjct: 368 GIVIKTDYNEHPDGGFNPQAFPILENINYTGIYG-QGVRVPVR--IQGSK--EIPVKNVT 422
Query: 205 LLVQAPSVKW------QCRFVSG 221
+ + + QC +V G
Sbjct: 423 FRDMSVGITYKKKHIFQCAYVEG 445
>gi|297830296|ref|XP_002883030.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
gi|297328870|gb|EFH59289.1| hypothetical protein ARALYDRAFT_318449 [Arabidopsis lyrata subsp.
lyrata]
Length = 452
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 126/258 (48%), Gaps = 40/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W+ +L ++R H++E ++S +ILI SNLTF N+PS IHPVYC ++ + + + +
Sbjct: 161 WEWLETGSLNYSRPHIIEFVSSKHILI-SNLTFLNAPSINIHPVYCSQIHIRKVLIETSV 219
Query: 63 SAPNTDGLDPD-----CYIES----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+P G+ PD C +S G+ V++KSGWD GI RP++ + +R +S +P
Sbjct: 220 DSPYVLGVAPDSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVYIRNLSLKSP 279
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYG------------------- 154
T +G+ G EMSG I +VTV L++ G R G
Sbjct: 280 TGAGISFGSEMSGGISDVTVERLNIQSSHVGVAFRTTRGRGGYIRNITISDVDLTSVDTA 339
Query: 155 ---------HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
HP + +D A+P ++ I N V+ A L GI + F IC+ ++ L
Sbjct: 340 IVANGHTGSHPDDKFDWDALPVVTHIVLRNFTGVDIGLAGNLTGIGESPFTSICLTDIHL 399
Query: 206 LVQAPSVKWQCRFVSGFN 223
+ S W C VSGF+
Sbjct: 400 HTHSDS--WICSNVSGFS 415
>gi|167523647|ref|XP_001746160.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775431|gb|EDQ89055.1| predicted protein [Monosiga brevicollis MX1]
Length = 464
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 126/259 (48%), Gaps = 45/259 (17%)
Query: 4 DLWW----NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
D+WW N T +TRGHL E+M S L +S+LT +SP T+HPVY ++ +T+L
Sbjct: 191 DIWWARHNNGTEVYTRGHLYEVMWSRQ-LEVSHLTLTHSPFWTVHPVYSQDFRAIDLTIL 249
Query: 60 SPLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG+DP DCY +G+ VA+KSGWD G + S+NI +
Sbjct: 250 NPPYSPNTDGVDPDSTRDVVIRDCYFSTGDDSVAIKSGWDVYGYTVNISSNNITIENCVF 309
Query: 111 TTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG---------------------SYKDR 149
+P +G+ +G EMSG I NV ++ + QG ++
Sbjct: 310 HSPNAAGICLGSEMSGGIANVFARNITMTGCLQGFRIKTGMGRGGYVVNVTVEDVVIENS 369
Query: 150 LRL-------YGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKN 202
++L YG G++P A P + IS +N N T+ L G+ +QF + +N
Sbjct: 370 IQLAVGYNGHYGGHPAGYNPLATPHVYNISLINARGGNNTQIAELVGLPNSQFRALRFQN 429
Query: 203 VSLLVQAPSVKWQCRFVSG 221
V + + W C +SG
Sbjct: 430 VHITGKQ---GWTCSDISG 445
>gi|81074755|gb|ABB55373.1| polygalacturonase-like protein-like [Solanum tuberosum]
Length = 479
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 116/230 (50%), Gaps = 38/230 (16%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W+ + + +L +TR HLVE ++S N+ +ISNLT N+P I P YC N ++ +TV +P
Sbjct: 191 WEKFNSHSLNYTRPHLVEFVSSRNV-VISNLTLLNAPGWNIRPAYCSNVVIQNLTVYTPQ 249
Query: 63 SAPNTDGLDPDCY---------IESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+P T+G+ PD I G + +KSGWD GI+ +P+SN+ +RRV +
Sbjct: 250 DSPFTNGIVPDSSEHVCIENSNISMGYDAIVLKSGWDEYGISYGKPTSNVHIRRVRLQSA 309
Query: 114 TCSGVGIGREMSGRIFNVTVN-----------HLDVWMQQQGSYKDRL------------ 150
+GV +G EMSG I +V V L + G KD L
Sbjct: 310 AGAGVALGSEMSGGISDVLVELSSLHDSLFGIELKTARGRGGFIKDILISNVVMDNLQVG 369
Query: 151 -RLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQF 195
+ G HP E +DP ++P +SGI+F ++V N + A G+ + F
Sbjct: 370 IKATGYSDMHPDEKYDPSSLPTVSGITFEDIVGTNISIAGNFTGLSESPF 419
>gi|15228881|ref|NP_188308.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|14334802|gb|AAK59579.1| putative polygalacturonase [Arabidopsis thaliana]
gi|21280835|gb|AAM44924.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332642352|gb|AEE75873.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 455
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 130/258 (50%), Gaps = 39/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W+ + +L ++R H++E ++S +IL ISNLTF N+P+ IHPVYC ++ + + + +
Sbjct: 163 WEWLESGSLNYSRPHIIEFVSSKHIL-ISNLTFLNAPAINIHPVYCSQIHIRKVLIETSV 221
Query: 63 SAPNTDGLDPD-----CYIES----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+P+ G+ PD C +S G+ V++KSGWD GI RP++ + +R + +P
Sbjct: 222 DSPHVLGVAPDSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRNLRLKSP 281
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVW----------MQQQGSYKDRLRLY---------- 153
T +G+ G EMSG + +VTV L++ + +G Y + +
Sbjct: 282 TGAGISFGSEMSGGVSDVTVERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDLTSVDTA 341
Query: 154 --------GHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
HP + +D A+P ++ I N V+ A L GI + F IC+ ++ L
Sbjct: 342 IVANGHTGSHPDDKFDRDALPVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSICLADIHL 401
Query: 206 LVQAPSVKWQCRFVSGFN 223
++ W C VSGF+
Sbjct: 402 QTRSEE-SWICSNVSGFS 418
>gi|7939578|dbj|BAA95779.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 453
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 130/258 (50%), Gaps = 39/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W+ + +L ++R H++E ++S +IL ISNLTF N+P+ IHPVYC ++ + + + +
Sbjct: 161 WEWLESGSLNYSRPHIIEFVSSKHIL-ISNLTFLNAPAINIHPVYCSQIHIRKVLIETSV 219
Query: 63 SAPNTDGLDPD-----CYIES----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+P+ G+ PD C +S G+ V++KSGWD GI RP++ + +R + +P
Sbjct: 220 DSPHVLGVAPDSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRNLRLKSP 279
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVW----------MQQQGSYKDRLRLY---------- 153
T +G+ G EMSG + +VTV L++ + +G Y + +
Sbjct: 280 TGAGISFGSEMSGGVSDVTVERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDLTSVDTA 339
Query: 154 --------GHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
HP + +D A+P ++ I N V+ A L GI + F IC+ ++ L
Sbjct: 340 IVANGHTGSHPDDKFDRDALPVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSICLADIHL 399
Query: 206 LVQAPSVKWQCRFVSGFN 223
++ W C VSGF+
Sbjct: 400 QTRSEE-SWICSNVSGFS 416
>gi|21553827|gb|AAM62920.1| polygalacturonase, putative [Arabidopsis thaliana]
Length = 453
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 130/258 (50%), Gaps = 39/258 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W+ + +L ++R H++E ++S +IL ISNLTF N+P+ IHPVYC ++ + + + +
Sbjct: 161 WEWLESGSLNYSRPHIIEFVSSKHIL-ISNLTFLNAPAINIHPVYCSQIHIRKVLIETSV 219
Query: 63 SAPNTDGLDPD-----CYIES----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+P+ G+ PD C +S G+ V++KSGWD GI RP++ + +R + +P
Sbjct: 220 DSPHVLGVAPDSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRNLRLKSP 279
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVW----------MQQQGSYKDRLRLY---------- 153
T +G+ G EMSG + +VTV L++ + +G Y + +
Sbjct: 280 TGAGISFGSEMSGGVSDVTVERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDLTSVDTA 339
Query: 154 --------GHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
HP + +D A+P ++ I N V+ A L GI + F IC+ ++ L
Sbjct: 340 IVTNGHTGSHPDDKFDRDALPVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSICLADIHL 399
Query: 206 LVQAPSVKWQCRFVSGFN 223
++ W C VSGF+
Sbjct: 400 QTRSEE-SWICSNVSGFS 416
>gi|302143796|emb|CBI22657.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 90/151 (59%), Gaps = 10/151 (6%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + TR +L+E+M S+++ I SNLT +SPS +HPVY RN VK +T+L+P+
Sbjct: 175 WDKFRAKKYNDTRPYLIEIMYSNHVQI-SNLTLIDSPSWNVHPVYSRNVLVKDLTILAPI 233
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG++P DC+I SG+ +AVKSGWD G P+ ++ +RR++ +P
Sbjct: 234 DSPNTDGINPDSCKKVRIEDCFIVSGDDCIAVKSGWDQYGYKFGMPTKDLLIRRLTCISP 293
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG 144
+ + +G EMSG I NV + Q G
Sbjct: 294 DSATIALGSEMSGGIKNVWAEDITAIDTQSG 324
>gi|297833452|ref|XP_002884608.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297330448|gb|EFH60867.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 446
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 125/257 (48%), Gaps = 39/257 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + + +LK+ R HL+E ++S N+ I+SNLTF N+P+ TIH +Y + ++ + S
Sbjct: 166 WDRFTSHSLKYNRPHLIEFLSSKNV-IVSNLTFLNAPAYTIHSIYSSHVYIHKILAHSSP 224
Query: 63 SAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+P T G+ PD I G +++KSGWD GIA +RP+ N+ +R V
Sbjct: 225 ESPYTIGIVPDSSNYVCIQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGA 284
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVW----------MQQQGSYKDRLRL----------- 152
+ S + G EMSG I +V V++ + + +G Y + +
Sbjct: 285 SGSSISFGSEMSGGISDVVVDNAHMHNSLTGIAFRTTKGRGGYIKEIDISNIDMSRIGTA 344
Query: 153 ------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
+G HP + +D A+P +S I N+ N A L GI + F + + N++L
Sbjct: 345 IVANGSFGSHPDDKYDANALPLVSHIRLSNISGENIGIAGKLFGIKESPFSAVALSNIAL 404
Query: 206 -LVQAPSVKWQCRFVSG 221
SV WQC +V G
Sbjct: 405 STSSGSSVSWQCSYVYG 421
>gi|359490607|ref|XP_003634121.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase-like
[Vitis vinifera]
Length = 492
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 131/264 (49%), Gaps = 49/264 (18%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + L TR +L+E++ S + I T +SPS +HP+Y RN ++G+T+++P+
Sbjct: 161 WDKFHEKRLNATRPNLIEIVFSYQVQI--TXTLIDSPSWNVHPIYSRNVIIQGLTIIAPV 218
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+ PNTDG++P DCYI SG+ +AVKS + +G+ P+ + +RR++ +P
Sbjct: 219 TVPNTDGINPDSCTNIRVEDCYIVSGDDSIAVKSALNENGVKCGMPTEGLIIRRLTCISP 278
Query: 114 TCSGVGIGREMSG----RIFNVTV------NHLDVWMQQQGSYKD----RLRL------- 152
+ + +GREM+G R ++T + +++ G KD R+ +
Sbjct: 279 HSAVIALGREMAGXMNVRAEDITAIDXQFGIRIKTGLERGGYVKDIYVRRMTMKTMRFAF 338
Query: 153 -----YGHP----KEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
YG P EG P I GI++ ++V+ N T L GI G F C+ NV
Sbjct: 339 WIIGDYGPPPAPGHEG------PVIEGINYRDMVADNVTYPAQLHGISGGPFTGFCISNV 392
Query: 204 SLLVQAPSVK--WQCRFVSGFNGQ 225
++ + S K W C V G +
Sbjct: 393 TIGLTEESRKQQWDCDEVQGITSR 416
>gi|30679999|ref|NP_850525.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|20260262|gb|AAM13029.1| unknown protein [Arabidopsis thaliana]
gi|22136514|gb|AAM91335.1| unknown protein [Arabidopsis thaliana]
gi|332640935|gb|AEE74456.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 446
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 124/257 (48%), Gaps = 39/257 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + + +LK+ R HL+E ++S N+ I+SNLTF N+P+ +I+ +Y + ++ + S
Sbjct: 166 WDRFTSHSLKYNRPHLIEFLSSENV-IVSNLTFLNAPAYSIYSIYSSHVYIHKILAHSSP 224
Query: 63 SAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+P T G+ PD I G +++KSGWD GIA +RP+ N+ +R V
Sbjct: 225 KSPYTIGIVPDSSDYVCIQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGA 284
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG------------------SYKDRLRL--- 152
+ S + G EMSG I +V V++ + G S D LR+
Sbjct: 285 SGSSISFGSEMSGGISDVVVDNAHIHYSLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTA 344
Query: 153 ------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV-S 204
+G HP + +D A+P +S I N+ N A L GI + F + + NV
Sbjct: 345 IVANGSFGSHPDDKYDVNALPLVSHIRLSNISGENIGIAGKLFGIKESPFSSVTLSNVSL 404
Query: 205 LLVQAPSVKWQCRFVSG 221
+ SV WQC +V G
Sbjct: 405 SMSSGSSVSWQCSYVYG 421
>gi|21593399|gb|AAM65366.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 377
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 124/257 (48%), Gaps = 39/257 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + + +LK+ R HL+E ++S N+ I+SNLTF N+P+ +I+ +Y + ++ + S
Sbjct: 97 WDRFTSHSLKYNRPHLIEFLSSENV-IVSNLTFLNAPAYSIYSIYSSHVYIHKILAHSSP 155
Query: 63 SAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+P T G+ PD I G +++KSGWD GIA +RP+ N+ +R V
Sbjct: 156 KSPYTIGIVPDSSDYVCIQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGA 215
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG------------------SYKDRLRL--- 152
+ S + G EMSG I +V V++ + G S D LR+
Sbjct: 216 SGSSISFGSEMSGGISDVVVDNAHIHYSLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTA 275
Query: 153 ------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV-S 204
+G HP + +D A+P +S I N+ N A L GI + F + + NV
Sbjct: 276 IVANGSFGSHPDDKYDVNALPLVSHIRLSNISGENIGIAGKLFGIKESPFSSVTLSNVSL 335
Query: 205 LLVQAPSVKWQCRFVSG 221
+ SV WQC +V G
Sbjct: 336 SMSSGSSVSWQCSYVYG 352
>gi|18397713|ref|NP_566292.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|30680007|ref|NP_850526.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|7549636|gb|AAF63821.1| unknown protein [Arabidopsis thaliana]
gi|332640933|gb|AEE74454.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332640934|gb|AEE74455.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 377
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 124/257 (48%), Gaps = 39/257 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + + +LK+ R HL+E ++S N+ I+SNLTF N+P+ +I+ +Y + ++ + S
Sbjct: 97 WDRFTSHSLKYNRPHLIEFLSSENV-IVSNLTFLNAPAYSIYSIYSSHVYIHKILAHSSP 155
Query: 63 SAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+P T G+ PD I G +++KSGWD GIA +RP+ N+ +R V
Sbjct: 156 KSPYTIGIVPDSSDYVCIQNSTINVGYDAISLKSGWDEYGIAYSRPTENVHIRNVYLRGA 215
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG------------------SYKDRLRL--- 152
+ S + G EMSG I +V V++ + G S D LR+
Sbjct: 216 SGSSISFGSEMSGGISDVVVDNAHIHYSLTGIAFRTTKGRGGYIKEIDISNIDMLRIGTA 275
Query: 153 ------YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV-S 204
+G HP + +D A+P +S I N+ N A L GI + F + + NV
Sbjct: 276 IVANGSFGSHPDDKYDVNALPLVSHIRLSNISGENIGIAGKLFGIKESPFSSVTLSNVSL 335
Query: 205 LLVQAPSVKWQCRFVSG 221
+ SV WQC +V G
Sbjct: 336 SMSSGSSVSWQCSYVYG 352
>gi|255641037|gb|ACU20798.1| unknown [Glycine max]
Length = 186
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 86/138 (62%), Gaps = 10/138 (7%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WDL +L ++R H++EL+ S NI IISNLTF NSP+ +IHPVYC N ++ +TV +P
Sbjct: 47 WDLISTHSLNYSRPHIIELVGSDNI-IISNLTFLNSPAWSIHPVYCSNIQIQKITVQAPT 105
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
P T G+ PD C I +G+ + +KSGWD G+A +P+SN+ +R V +
Sbjct: 106 KFPYTSGIVPDSSEHVCIDNCNISTGHDAIVLKSGWDEYGVAYGKPTSNVHIRGVYLQSS 165
Query: 114 TCSGVGIGREMSGRIFNV 131
+ +G+ G EMSG I ++
Sbjct: 166 SGAGLAFGSEMSGGISDI 183
>gi|194696678|gb|ACF82423.1| unknown [Zea mays]
Length = 335
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 93/163 (57%), Gaps = 18/163 (11%)
Query: 5 LWW----NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+WW + L H+R +L+E + S +I +ISNLTF NSP+ +IHPVYC N V +T+ +
Sbjct: 165 VWWQWLRSHELNHSRPNLLEFLYSEDI-VISNLTFLNSPAWSIHPVYCSNVKVHNVTIKT 223
Query: 61 PLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
L AP TDG+ P D I + +++KSGWD GI+ RP+S+I + RV
Sbjct: 224 SLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRPTSDIRISRVDLL 283
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYG 154
+ + + + G EMSG I ++ VNHL + S KD YG
Sbjct: 284 SSSGAALAFGSEMSGGISDIHVNHLRI----HDSSKDGQMFYG 322
>gi|223949035|gb|ACN28601.1| unknown [Zea mays]
Length = 376
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 95/159 (59%), Gaps = 14/159 (8%)
Query: 5 LWW----NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+WW + L H+R +L+E + S +I +ISNLTF NSP+ +IHPVYC N V +T+ +
Sbjct: 165 VWWQWLRSHELNHSRPNLLEFLYSEDI-VISNLTFLNSPAWSIHPVYCSNVKVHNVTIKT 223
Query: 61 PLSAPNTDGLDPD-----CYIES----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
L AP TDG+ PD C +S + +++KSGWD GI+ RP+S+I + RV
Sbjct: 224 SLDAPLTDGIVPDSCSNLCIEDSTISVSHEAISLKSGWDRYGISFGRPTSDIRISRVDLL 283
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRL 150
+ + + + G EMSG I ++ VNHL + +G ++ L
Sbjct: 284 SSSGAALAFGSEMSGGISDIHVNHLRIHDSSKGPPEEVL 322
>gi|255545182|ref|XP_002513652.1| Exopolygalacturonase precursor, putative [Ricinus communis]
gi|223547560|gb|EEF49055.1| Exopolygalacturonase precursor, putative [Ricinus communis]
Length = 452
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 114/249 (45%), Gaps = 53/249 (21%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + K +R L+++M + L ISN+T NSPS +HPVYC N V+G+T+++P+
Sbjct: 181 WDKFEKGLFKASRPLLIDIMYTDQ-LQISNITLVNSPSWHVHPVYCSNVLVQGVTIIAPV 239
Query: 63 SAPNTDGLDPDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGR 122
PNTDG++P ++ S H + S++ A G+ +G
Sbjct: 240 EVPNTDGINPSRFLASSF----------HQYLNFPLISTSDA------------GIALGS 277
Query: 123 EMSGRIFNVTVNHLDVWMQQQ-----------GSYKD----RLRLY-------------G 154
EMSG I NV V + + Q G KD R+ L
Sbjct: 278 EMSGGIENVRVEDITAFTSQSAVRIKTAPGRGGYVKDIFVRRMTLQTMKYVFWISGNYKT 337
Query: 155 HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL-LVQAPSV- 212
HP +G+DP A+ +I I++ ++V+ N + G F ICM NV++ L Q P
Sbjct: 338 HPDDGFDPNALAEIKNINYRDIVARNVNMSGAFDGFPTNHFTGICMSNVTIQLSQTPKKP 397
Query: 213 KWQCRFVSG 221
+W C V G
Sbjct: 398 QWNCSNVEG 406
>gi|297745346|emb|CBI40426.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 71/104 (68%), Gaps = 14/104 (13%)
Query: 5 LWWN----STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
LWW LK+TR +L+ELM S++I ISNLT NSPS +HPVY RN ++G+T+L+
Sbjct: 170 LWWQRFHGGKLKYTRPYLIELMYSADIQ-ISNLTLLNSPSWNVHPVYSRNILIQGITILA 228
Query: 61 PLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIA 95
P+ +PNTDG++P DCYI SG+ VAVKSGWD GIA
Sbjct: 229 PVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIA 272
>gi|317474355|ref|ZP_07933629.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
gi|316909036|gb|EFV30716.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
Length = 477
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 78/134 (58%), Gaps = 11/134 (8%)
Query: 9 STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTD 68
S LK+ R ++ L N+ I ++LT NSPS T+HPVYCRN + G++++ P +PNTD
Sbjct: 149 SPLKYPRPRMINLYRCENVKI-ADLTITNSPSWTVHPVYCRNVIIDGISIIQPYESPNTD 207
Query: 69 GLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVG 119
G+DPD CYI+ G+ + +KSG++ G P NI + + S VG
Sbjct: 208 GIDPDCCNGVRISNCYIDCGDDCITLKSGYNEHGRKKGIPCENIVISNCTFAHGR-SAVG 266
Query: 120 IGREMSGRIFNVTV 133
IG EMSG I NVTV
Sbjct: 267 IGSEMSGGIKNVTV 280
>gi|29121121|gb|AAO62947.1| putative polygalacturonase-like protein [Lactuca sativa]
gi|29121352|gb|AAO62948.1| putative polygalacturonase-like protein [Lactuca sativa]
Length = 193
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 99/194 (51%), Gaps = 41/194 (21%)
Query: 68 DGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGV 118
DG+DPD YI +G+ LVAVKSGWD GI ARPS++I +RR++G++P +G+
Sbjct: 1 DGIDPDSSSHVCIEDSYISTGDDLVAVKSGWDQYGIKYARPSNDITIRRLTGSSP-FAGI 59
Query: 119 GIGREMSGRIFNVTVNHL---------------------------DVWMQQ-QGSYKDRL 150
IG E SG ++NV H+ DV+M + K
Sbjct: 60 AIGSETSGGVYNVLAEHITLKNMGIGIHLKTNIGRGGIIRNITVSDVYMVNVRKGIKISA 119
Query: 151 RLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL---LV 207
+ HP + ++P A+P + + NV +A ++ G+ + F +IC+ N++L ++
Sbjct: 120 DVGDHPDKNYNPNALPVLKHVRIKNVWGKKVQQAGLIHGLKNSPFTDICLSNINLQGPII 179
Query: 208 QAPSVKWQCRFVSG 221
+V W+C +VSG
Sbjct: 180 STRNVPWKCSYVSG 193
>gi|255642114|gb|ACU21323.1| unknown [Glycine max]
Length = 203
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 69/106 (65%), Gaps = 10/106 (9%)
Query: 10 TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDG 69
T +HTR +L+ELM S NI I SNLT NSPS +HPVY N V+G+T+ +P+++PNTDG
Sbjct: 95 TRRHTRPYLIELMFSDNIQI-SNLTLLNSPSWNVHPVYSSNIIVQGITIYAPVTSPNTDG 153
Query: 70 LDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR 106
++P DCYI SG+ VAVKSGWD GI P+ + +
Sbjct: 154 INPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIE 199
>gi|219120807|ref|XP_002185635.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582484|gb|ACI65105.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 451
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 117/266 (43%), Gaps = 49/266 (18%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD ++ ++TRGHLVE M SS I + NL NSP T H C + V+ + V +P
Sbjct: 141 WDRRRHNRDRYTRGHLVEFMYSSRIRMY-NLRLQNSPFWTNHFYDCDDVHVQNVHVKAPW 199
Query: 63 SAPNTDGLDPD----CYIES-----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
S+PNTDG DPD IE G+ VA+KSGWD GI PS NI +R V+ P
Sbjct: 200 SSPNTDGWDPDSSRNVLIEDSTYRGGDDCVAIKSGWDCFGIDYDTPSENITIRNVTCQGP 259
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQ----------GSY-----KDRLRLYGHPKE 158
+G+ IG EMSG + NVTV ++ + G Y +R+ GH +
Sbjct: 260 -YAGIAIGTEMSGGVRNVTVENVTFTYANKPANIKTGNTRGGYVHDVVYQNIRITGHIDQ 318
Query: 159 G-------------------WDPKAIPKISGISFVNV----VSVNTTKAPVLAGIIGTQF 195
+ P +P + + F N + + G+ +
Sbjct: 319 AIHVDMYHYHNTPNPSCSNNYQPNQLPHLRDLYFFNFEGTQALTESHEVFHFVGLPESPI 378
Query: 196 EEICMKNVSLLVQAPSVKWQCRFVSG 221
E + ++N+S S+ W C V G
Sbjct: 379 EYVFLENISFPTPVSSLGWNCSNVQG 404
>gi|359477236|ref|XP_003631950.1| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
Length = 275
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 89/180 (49%), Gaps = 29/180 (16%)
Query: 73 DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 132
DC I G+ +A+KSGWD GIA RP++N+ +RRV+ + + S + G EMSG I NV
Sbjct: 60 DCSIAMGHDAIALKSGWDEYGIAYGRPTTNVHIRRVNLQSSSGSSLAFGSEMSGGISNVC 119
Query: 133 VNHLDVW----------MQQQGSYKDRL------------------RLYGHPKEGWDPKA 164
V + ++ + +G Y + ++ HP + +DP A
Sbjct: 120 VEQVHLYNSFSGIEFRTTKGRGGYIQEIIISDVAMENIHTAFSATGQIGSHPDDHFDPNA 179
Query: 165 IPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLVQAP-SVKWQCRFVSGFN 223
+P + I+ NV+ N T A GI + F IC+ N+SL P S+ W C VSGF+
Sbjct: 180 LPVLDHITLQNVIGTNITIAGSFTGIQESPFTSICLSNISLSTTPPASISWVCSNVSGFS 239
>gi|414873754|tpg|DAA52311.1| TPA: hypothetical protein ZEAMMB73_541408 [Zea mays]
Length = 253
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 89/178 (50%), Gaps = 29/178 (16%)
Query: 74 CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV 133
CY+ +G ++ +KSGWD GI+ A+PSSNI++ ++G T SG+ G EMSG I V
Sbjct: 21 CYVRNGGDVIVIKSGWDEYGISFAQPSSNISISDITGETRGGSGIAFGSEMSGGISEVRA 80
Query: 134 NHLDV----------WMQQQGSYKDRLRL-----------------YG-HPKEGWDPKAI 165
L + +G Y + + + YG HP + +D A+
Sbjct: 81 VGLRIVNSLHGIRIKTAPGRGGYVENVYIADVSMDNVSMAIRITGNYGEHPDDKYDSTAL 140
Query: 166 PKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLVQAPSVKWQCRFVSGFN 223
P IS I+ +VV VN A +L GI G F IC+ NVSL VQ+ W C + G++
Sbjct: 141 PVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSLSVQSAH-PWNCSLIEGYS 197
>gi|413941562|gb|AFW74211.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
Length = 291
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 60/81 (74%), Gaps = 5/81 (6%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
M W+LW N TL HTRGHL+EL+NS+N+LI S++T NSP T+HPVYC N +K +T+L+
Sbjct: 210 MWWELWRNRTLNHTRGHLIELVNSTNVLI-SSVTLSNSPFWTVHPVYCSNVVMKDLTILA 268
Query: 61 PLSAPNTDGLDP----DCYIE 77
PL APNTDG+DP CY
Sbjct: 269 PLDAPNTDGIDPGLCASCYFH 289
>gi|109509136|gb|ABG34277.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 242
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 93/195 (47%), Gaps = 39/195 (20%)
Query: 67 TDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSG 117
TDG++PD CYI SG+ VAVKSGWD GIA P+ + +RR++ +P +
Sbjct: 1 TDGINPDSCTNVRIEDCYIVSGDDCVAVKSGWDEYGIAFGMPTQQLIIRRLTCISPYSAT 60
Query: 118 VGIGREMSGRIFNVTVNHL----------------------DVWMQQQG------SYKDR 149
+ +G EMSG I +V + D+++++ ++K
Sbjct: 61 IALGSEMSGGIRDVRAEDIVAINTESGIRIKTAVGRGAYIKDIYVKKMTMHTMKWAFKMD 120
Query: 150 LRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLVQA 209
HP +DP A+P I I++ ++V+ N + A GI G +F ICM NV+L + A
Sbjct: 121 GDYKSHPDNKYDPNALPVIQNINYRDMVAENVSVAARFNGIAGDKFTGICMANVTLGMTA 180
Query: 210 PSVK--WQCRFVSGF 222
K W C V G
Sbjct: 181 KHKKYPWTCTDVQGM 195
>gi|302143795|emb|CBI22656.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 82/158 (51%), Gaps = 25/158 (15%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + L TR +L+E+M S + I SNLT +SPS +HPVYC + ++GMT+L+P+
Sbjct: 171 WDKFKQKKLVDTRPYLIEIMFSDQVQI-SNLTLIDSPSWNVHPVYCSDVIIQGMTILAPV 229
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGI--------AMARPS----- 100
PNTDG++P DCYI SG+ +AVKSGWD GI A+ R
Sbjct: 230 DVPNTDGINPDSCANVKIEDCYIVSGDDCIAVKSGWDQYGIKYGAWEGEAIGRGEWGGSE 289
Query: 101 --SNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNHL 136
I R+ S G G+ M+ + F + +L
Sbjct: 290 EYRAINCRKHSAVLTDFGAKGDGKTMNTKAFKSAIANL 327
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 64/105 (60%), Gaps = 10/105 (9%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + LK TR +L+E+M S + I SNL +SPS +HP Y N ++ +T+++P+
Sbjct: 423 WDKFRADKLKDTRPYLIEIMYSDQVQI-SNLILIDSPSWNVHPTYSSNVIIQWLTIIAPV 481
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMAR 98
+PNTDG++P DC+I SG+ +AVKSGWD GI +
Sbjct: 482 GSPNTDGINPDSSKNVLIEDCFIVSGDDCIAVKSGWDQYGIKCGK 526
Score = 37.4 bits (85), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 157 KEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL-LVQAP-SVKW 214
K GWD I G + +V+ N T + L GI G F IC+ NV + L + P ++W
Sbjct: 514 KSGWDQYGIK--CGKGRIYMVAENVTYSARLDGISGDPFTGICISNVKIGLTEKPKKLQW 571
Query: 215 QCRFVSGFNGQ 225
C V G + Q
Sbjct: 572 NCTNVEGVSSQ 582
>gi|109509134|gb|ABG34276.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 241
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 94/195 (48%), Gaps = 39/195 (20%)
Query: 68 DGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGV 118
DG++PD CYI SG+ VAVKSGWD GIA P+ + +RR++ +PT + +
Sbjct: 1 DGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPTSAVI 60
Query: 119 GIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRLYG-------------- 154
+G EMSG I +V + + +G Y + + G
Sbjct: 61 ALGSEMSGGIEDVRAEDILAINSESGVRIKTAIGRGGYVKDIYVKGMTMRTMKWVFWMTG 120
Query: 155 ----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL-LVQA 209
H +DP A+P I I++ ++V+ N T A L GI G F IC+ NV++ L Q
Sbjct: 121 NYGSHADNNYDPNALPLIQNINYRDMVAENVTMAARLEGIAGDPFTGICISNVTIGLAQK 180
Query: 210 P-SVKWQCRFVSGFN 223
P ++W C +SG +
Sbjct: 181 PKKLQWNCTDISGIS 195
>gi|297816102|ref|XP_002875934.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
gi|297321772|gb|EFH52193.1| hypothetical protein ARALYDRAFT_906150 [Arabidopsis lyrata subsp.
lyrata]
Length = 443
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 113/242 (46%), Gaps = 53/242 (21%)
Query: 3 WDLWWNSTLKH-TRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
W + N K R L+E+ +S N+ I SN+ +SP +IHPVYCRN +KG+ + +P
Sbjct: 172 WAKYRNGGFKSIQRPMLIEIQSSENVQI-SNINLIDSPMWSIHPVYCRNVIIKGVKISNP 230
Query: 62 LSAPNTDGLDPDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIG 121
+ + NTDG++P + RP + +RR S P +G+ +G
Sbjct: 231 IDSANTDGINP-----------------------VGRPIEMLLIRRFSCIAPNGAGIAMG 267
Query: 122 REMSG-----RIFNVTVNHL-----------------DVWMQQ---QGSYKDRLRLYGH- 155
EMSG R+ +VT+++ +VW ++ + S L H
Sbjct: 268 SEMSGGIKGVRMEDVTLHNTQSAIKIETAMGRGGYVQNVWARRFTIKTSKYVFLMTGSHK 327
Query: 156 --PKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLVQAPSVK 213
P++G PKA P ++ I+F ++ N + + L G+ F +CM NVS+ + + K
Sbjct: 328 PIPRDGNIPKAKPVVTNINFRDITGENVSTSAKLEGMKSNPFTGVCMSNVSISLSPNASK 387
Query: 214 WQ 215
Q
Sbjct: 388 QQ 389
>gi|109509132|gb|ABG34275.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 238
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 90/196 (45%), Gaps = 39/196 (19%)
Query: 67 TDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSG 117
TDG+DPD +I SG+ VAVKSGWD GI+ P+ + +RR++ +P +
Sbjct: 1 TDGVDPDSCTNTRIEDVHIVSGDDCVAVKSGWDEYGISYGMPTKQLVIRRLTCISPYSAM 60
Query: 118 VGIGREMSGRIFNVTVNHLDVWMQQ----------QGSYKDRLRLYG------------- 154
+ +G EMSG I +V + + +G Y + + G
Sbjct: 61 IALGSEMSGGIEDVRAEDITAINTESGIRIKTAMGRGGYVKDIYVRGMKMHTMKWAFWMD 120
Query: 155 -----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLVQA 209
HP +DPKA P I+GI++ ++V+ N T L GI G F IC+ N ++ +
Sbjct: 121 GNYGSHPDPHYDPKARPIITGINYRDIVAENVTMVAQLKGIPGNPFTGICISNATITMAP 180
Query: 210 PSVK--WQCRFVSGFN 223
S K W C + G
Sbjct: 181 ESKKEPWTCSDIHGIT 196
>gi|403744854|ref|ZP_10953930.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121782|gb|EJY56052.1| glycoside hydrolase family 28 [Alicyclobacillus hesperidum
URH17-3-68]
Length = 865
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 77/140 (55%), Gaps = 12/140 (8%)
Query: 7 WNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPN 66
++ L + R L+E ++S NILI +T NSPS TIHPVYC + + + +++P ++ N
Sbjct: 277 YSQGLPYARPSLIEFLHSQNILI-QGVTVQNSPSWTIHPVYCDHVTLADVHIVNPPTSDN 335
Query: 67 TDGLDPDCY---------IESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSG 117
TDG+DPD G+ +A+KSG D +G + PS NI VR G
Sbjct: 336 TDGVDPDSVNGMQIIDDTFSVGDDDIAIKSGKDAEGRRIGIPSQNIVVRNCH--MLNGHG 393
Query: 118 VGIGREMSGRIFNVTVNHLD 137
V IG EMSG + NV V + D
Sbjct: 394 VSIGSEMSGGVQNVLVENCD 413
>gi|212693830|ref|ZP_03301958.1| hypothetical protein BACDOR_03351 [Bacteroides dorei DSM 17855]
gi|212663719|gb|EEB24293.1| glycosyl hydrolase, family 43 [Bacteroides dorei DSM 17855]
Length = 957
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 23/203 (11%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP-- 72
R ++ M S IL+ +T NSP TIHPVYC N V+ +T+ S PN DG DP
Sbjct: 693 RPSCIQFMGCSRILV-EGITIKNSPFWTIHPVYCDNVIVRSITIDS--HYPNNDGCDPES 749
Query: 73 -------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
+C +G+ +A+K+G D DG + RPS NI +R + C+G+ IG EMS
Sbjct: 750 TSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQS-ECNGLCIGSEMS 808
Query: 126 GRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISFVN----VVSVNT 181
G + N+ ++++ + G+ K+ L + G + I ++S I+ V+ T
Sbjct: 809 GGVENIYMDNIQI-----GTVKNALYFKSNRDRGGYIRNI-QVSNITIERSKGAVLRFET 862
Query: 182 TKAPVLAGIIGTQFEEICMKNVS 204
G +Q+E + NV
Sbjct: 863 NYFGFQGGRHTSQYENFRINNVK 885
>gi|265755035|ref|ZP_06089949.1| beta-xylosidase [Bacteroides sp. 3_1_33FAA]
gi|263234646|gb|EEZ20225.1| beta-xylosidase [Bacteroides sp. 3_1_33FAA]
Length = 955
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 23/203 (11%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP-- 72
R ++ M S IL+ +T NSP TIHPVYC N V+ +T+ S PN DG DP
Sbjct: 691 RPSCIQFMGCSRILV-EGITIKNSPFWTIHPVYCDNVIVRSITIDS--HYPNNDGCDPES 747
Query: 73 -------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
+C +G+ +A+K+G D DG + RPS NI +R + C+G+ IG EMS
Sbjct: 748 TSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQS-ECNGLCIGSEMS 806
Query: 126 GRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISFVN----VVSVNT 181
G + N+ ++++ + G+ K+ L + G + I ++S I+ V+ T
Sbjct: 807 GGVENIYMDNIQI-----GTVKNALYFKSNRDRGGYIRNI-QVSNITIERSKGAVLRFET 860
Query: 182 TKAPVLAGIIGTQFEEICMKNVS 204
G +Q+E + NV
Sbjct: 861 NYFGFRGGRHTSQYENFRINNVK 883
>gi|345513230|ref|ZP_08792752.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|345456240|gb|EEO47229.2| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
Length = 955
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 23/202 (11%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP-- 72
R ++ M S IL+ +T NSP TIHPVYC N V+ +T+ S PN DG DP
Sbjct: 691 RPSCIQFMGCSRILV-EGITIKNSPFWTIHPVYCDNVIVRSITIDS--HYPNNDGCDPES 747
Query: 73 -------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
+C +G+ +A+K+G D DG + RPS NI +R + C+G+ IG EMS
Sbjct: 748 TSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQS-ECNGLCIGSEMS 806
Query: 126 GRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISFVN----VVSVNT 181
G + N+ ++++ + G+ K+ L + G + I ++S I+ V+ T
Sbjct: 807 GGVENIYMDNIQI-----GTVKNALYFKSNRDRGGYIRNI-QVSNITIERSKGAVLRFET 860
Query: 182 TKAPVLAGIIGTQFEEICMKNV 203
G +Q+E + NV
Sbjct: 861 NYFGFQGGRHTSQYENFRINNV 882
>gi|423232721|ref|ZP_17219121.1| hypothetical protein HMPREF1063_04941 [Bacteroides dorei
CL02T00C15]
gi|423247413|ref|ZP_17228463.1| hypothetical protein HMPREF1064_04669 [Bacteroides dorei
CL02T12C06]
gi|392623160|gb|EIY17265.1| hypothetical protein HMPREF1063_04941 [Bacteroides dorei
CL02T00C15]
gi|392632553|gb|EIY26512.1| hypothetical protein HMPREF1064_04669 [Bacteroides dorei
CL02T12C06]
Length = 955
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 74/133 (55%), Gaps = 13/133 (9%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP-- 72
R ++ M S IL+ +T NSP TIHPVYC N V+ +T+ S PN DG DP
Sbjct: 691 RPSCIQFMGCSRILV-EGITIKNSPFWTIHPVYCDNVIVRSITIDS--HYPNNDGCDPES 747
Query: 73 -------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
+C +G+ +A+K+G D DG + RPS NI +R + C+G+ IG EMS
Sbjct: 748 TSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQS-ECNGLCIGSEMS 806
Query: 126 GRIFNVTVNHLDV 138
G + N+ ++++ +
Sbjct: 807 GGVENIYMDNIQI 819
>gi|423242205|ref|ZP_17223315.1| hypothetical protein HMPREF1065_03938 [Bacteroides dorei
CL03T12C01]
gi|392639949|gb|EIY33757.1| hypothetical protein HMPREF1065_03938 [Bacteroides dorei
CL03T12C01]
Length = 955
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 74/133 (55%), Gaps = 13/133 (9%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP-- 72
R ++ M S IL+ +T NSP TIHPVYC N V+ +T+ S PN DG DP
Sbjct: 691 RPSCIQFMGCSRILV-EGITIKNSPFWTIHPVYCDNVIVRSITIDS--HYPNNDGCDPES 747
Query: 73 -------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
+C +G+ +A+K+G D DG + RPS NI +R + C+G+ IG EMS
Sbjct: 748 TSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQS-ECNGLCIGSEMS 806
Query: 126 GRIFNVTVNHLDV 138
G + N+ ++++ +
Sbjct: 807 GGVENIYMDNIQI 819
>gi|237709360|ref|ZP_04539841.1| beta-xylosidase [Bacteroides sp. 9_1_42FAA]
gi|229456745|gb|EEO62466.1| beta-xylosidase [Bacteroides sp. 9_1_42FAA]
Length = 938
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 23/202 (11%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP-- 72
R ++ M S IL+ +T NSP TIHPVYC N V+ +T+ S PN DG DP
Sbjct: 674 RPSCIQFMGCSRILV-EGITIKNSPFWTIHPVYCDNVIVRSITIDS--HYPNNDGCDPES 730
Query: 73 -------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
+C +G+ +A+K+G D DG + RPS NI +R + C+G+ IG EMS
Sbjct: 731 TSNVLIEECIFRTGDDAIAIKAGRDADGREIGRPSKNIVIRNCLFQS-ECNGLCIGSEMS 789
Query: 126 GRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISFVN----VVSVNT 181
G + N+ ++++ + G+ K+ L + G + I ++S I+ V+ T
Sbjct: 790 GGVENIYMDNIQI-----GTVKNALYFKSNRDRGGYIRNI-QVSNITIERSKGAVLRFET 843
Query: 182 TKAPVLAGIIGTQFEEICMKNV 203
G +Q+E + NV
Sbjct: 844 NYFGFRGGRHTSQYENFRINNV 865
>gi|413923569|gb|AFW63501.1| hypothetical protein ZEAMMB73_605801 [Zea mays]
Length = 313
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 34/209 (16%)
Query: 43 IHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDCYIESGNGLVAVKSGWDHDGIAMARPSSN 102
IHP + + + L+ ++ D L +CYI G+ +A+KSGWD GIA RPSS+
Sbjct: 70 IHPFFYN---ILSILTLALVTDSCQDVLIENCYISVGDDAIAIKSGWDQYGIAYGRPSSD 126
Query: 103 IAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG----------------SY 146
I +R V+ + +G+ IG EMSG + NVTV ++ +W ++G SY
Sbjct: 127 ILIRNVTARSLVSAGISIGSEMSGGVANVTVENVRIWESRRGVRIKTATGRGGYIRNISY 186
Query: 147 KD------------RLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLA-GIIGT 193
++ ++ H +G+D A P I+ ISF + + PV A G
Sbjct: 187 RNITFDNVRAGIVIKVDYNEHADDGYDRTAFPDITSISFKGIHG-QGVRVPVRAHGSDVI 245
Query: 194 QFEEICMKNVSLLVQAPSVK-WQCRFVSG 221
++I +++S+ + +QC ++ G
Sbjct: 246 PIKDISFQDMSVGISYKKKHIFQCSYLEG 274
>gi|189462203|ref|ZP_03010988.1| hypothetical protein BACCOP_02885 [Bacteroides coprocola DSM 17136]
gi|189431106|gb|EDV00091.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 460
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 72/128 (56%), Gaps = 12/128 (9%)
Query: 28 LIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYIES 78
++I +T +SP TIHPVYC N V+G+T+ S PN DG DP+ C +
Sbjct: 208 VLIEGITVKDSPFWTIHPVYCDNVIVRGVTIDSHF--PNNDGCDPESTTNVLIENCTFRT 265
Query: 79 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNHLDV 138
G+ +A+KSG D DG + RPS NI +R + C+G+ IG EMSG +V +N++++
Sbjct: 266 GDDAIAIKSGRDTDGRYIGRPSRNIVIRNCIFHS-ECNGLCIGSEMSGGASDVYMNNIEI 324
Query: 139 WMQQQGSY 146
+ Y
Sbjct: 325 GTVKNAIY 332
>gi|399889206|ref|ZP_10775083.1| glycoside hydrolase family protein [Clostridium arbusti SL206]
Length = 756
Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 54/147 (36%), Positives = 78/147 (53%), Gaps = 20/147 (13%)
Query: 5 LWWNS------TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTV 58
LWW++ T + R ++L+N +LI + NSPS TIHP+Y +N + + V
Sbjct: 302 LWWDNPKATDPTKQTARPRTIQLINCDGVLI-QGVKVQNSPSWTIHPLYSKNITIADVNV 360
Query: 59 ---LSPLSAPNTDGLDPDCY---------IESGNGLVAVKSGWDHDGIAMARPSSNIAVR 106
SP+ +PNTDGLDPD + G+ +A+KSG D +G + PSSNI +R
Sbjct: 361 KNPSSPVDSPNTDGLDPDSVDNLLVVNTTFDVGDDCIAIKSGKDAEGRKIGIPSSNITIR 420
Query: 107 RVSGTTPTCSGVGIGREMSGRIFNVTV 133
S GV +G EMSG I N+ +
Sbjct: 421 N-SLMLHGHGGVTLGSEMSGGINNINI 446
>gi|323453807|gb|EGB09678.1| hypothetical protein AURANDRAFT_2438, partial [Aureococcus
anophagefferens]
Length = 295
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 82/150 (54%), Gaps = 13/150 (8%)
Query: 6 WWNS--TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
WW+ ++ TRGHL+E M S +I I +L+ +SP H V+ + + + +
Sbjct: 131 WWDQVHSMTVTRGHLIEFMYSKDIRIY-DLSMRDSPFWNNHFYDSERVHVRNVHISAKDN 189
Query: 64 APNTDGLDPDCYIE---------SGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+PNTDG DPD + G+ VA+KSGWD G+A +PS NI +R V+ T +
Sbjct: 190 SPNTDGWDPDSARDVLVEHSTYVGGDDCVAIKSGWDCFGVAYGKPSRNITIRDVN-CTGS 248
Query: 115 CSGVGIGREMSGRIFNVTVNHLDVWMQQQG 144
+G+ IG EMSG + +V V +++ + G
Sbjct: 249 KAGIAIGSEMSGGVEDVLVQRVNILGKANG 278
>gi|218187051|gb|EEC69478.1| hypothetical protein OsI_38684 [Oryza sativa Indica Group]
Length = 365
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 28/161 (17%)
Query: 73 DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 132
D I + +++KSGWD+ GI + RP+S+I + RV + + G EMSG I ++
Sbjct: 152 DSSISVAHDAISLKSGWDNYGITIGRPASDIHISRVDLQASLGAALAFGSEMSGGISDIH 211
Query: 133 VNHLDVWMQQQG---------------------SYKD---RLRLYG----HPKEGWDPKA 164
V+HL++ +G +D ++ G HP +DP A
Sbjct: 212 VDHLNIHGSSRGILFKTAPGRGGYIRDVVISDVQMEDVNVAIKFTGDWSTHPDNHFDPSA 271
Query: 165 IPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
+P I+ I+ N+V N + A VL+GI G F IC+ N+S
Sbjct: 272 LPMINRITLKNMVGTNISVAGVLSGINGDPFTNICLSNISF 312
>gi|332299163|ref|YP_004441085.1| Polygalacturonase [Treponema brennaborense DSM 12168]
gi|332182266|gb|AEE17954.1| Polygalacturonase [Treponema brennaborense DSM 12168]
Length = 449
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 72/130 (55%), Gaps = 11/130 (8%)
Query: 11 LKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGL 70
++ R LV+ N +N+ + +T NSP T+HPVYC N V+G+T+ +P APNTDG+
Sbjct: 157 VQFLRPALVQFYNCTNVRL-EQVTLENSPFWTVHPVYCDNLLVRGITIQNPKDAPNTDGI 215
Query: 71 D---------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIG 121
D DC + G+ +A+KSG DGI + RP+ N+ VR + G+ IG
Sbjct: 216 DIDSCTNVQIVDCEVSVGDDGIALKSGSGEDGIRVNRPTRNVTVRGCT-VRDAHGGMVIG 274
Query: 122 REMSGRIFNV 131
E + I +V
Sbjct: 275 SETAAGIRHV 284
>gi|442804408|ref|YP_007372557.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740258|gb|AGC67947.1| polygalacturonase Pgl [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 430
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 74/142 (52%), Gaps = 13/142 (9%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W L LK+ R + S +LI + NSP+ TI+PV C N + G+T+ +P
Sbjct: 121 WRLQREKQLKYPRPRFICFQESERVLI-QGIKIINSPAWTINPVRCNNVVIDGITIKNPA 179
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG++PD CYI G+ VA+KSG ++ + P NI + +
Sbjct: 180 DSPNTDGINPDSCRNVRITNCYISVGDDCVAIKSGVEYSKYRI--PCENITITNCT-MLD 236
Query: 114 TCSGVGIGREMSGRIFNVTVNH 135
GV IG EMSG + N+T+++
Sbjct: 237 GHGGVVIGSEMSGCVRNITISN 258
>gi|192362237|ref|YP_001980696.1| polygalacturonase pga28A [Cellvibrio japonicus Ueda107]
gi|190688402|gb|ACE86080.1| polygalacturonase, putative, pga28A [Cellvibrio japonicus Ueda107]
Length = 489
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 67/120 (55%), Gaps = 12/120 (10%)
Query: 28 LIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP---------DCYIES 78
++I +T NSP ++PV C + V+G+T S PN+DG DP DCY ++
Sbjct: 251 VLIEGVTIVNSPFWLLNPVLCNDVIVRGVTCDS--MGPNSDGCDPESCDRVLIEDCYFDT 308
Query: 79 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNHLDV 138
G+ +A+KSG +HDG + RPS NI +R GV IG EMSG + NV V H ++
Sbjct: 309 GDDCIAIKSGRNHDGRRINRPSQNIVIRNCH-MRRGHGGVVIGSEMSGGVRNVFVEHCEM 367
>gi|238005826|gb|ACR33948.1| unknown [Zea mays]
Length = 256
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD+W TL TR HL+ELM S+++ ++SNL F +SP IHPVYC N + +TVL+P
Sbjct: 168 WDMWKKRTLPFTRPHLLELMYSTDV-VVSNLVFQDSPFWNIHPVYCSNVVIANLTVLAPH 226
Query: 63 SAPNTDGLD 71
+PNTDG+D
Sbjct: 227 DSPNTDGID 235
>gi|392950256|ref|ZP_10315813.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
gi|392434538|gb|EIW12505.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
Length = 427
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 25/148 (16%)
Query: 6 WWN------STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
WW + L++ R +L + +S + +I N+TF NSP+ T+HP C N + +TV+
Sbjct: 118 WWRRFDEKAAELEYPRPYLCSIEHSEQV-VIENVTFVNSPAWTLHPFDCENVAINNVTVV 176
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAV---RR 107
+P ++PNTDGLDP+ C + G+ +A+KSG + ++A NI +
Sbjct: 177 NPKNSPNTDGLDPESCRNIRIANCCFDVGDDCIAIKSGTEDASQSIA--CENIIISGCNM 234
Query: 108 VSGTTPTCSGVGIGREMSGRIFNVTVNH 135
V G GV G EMSG I NVT+++
Sbjct: 235 VHGH----GGVVFGSEMSGDIRNVTISN 258
>gi|254295110|ref|YP_003061133.1| glycoside hydrolase family protein [Hirschia baltica ATCC 49814]
gi|254043641|gb|ACT60436.1| glycoside hydrolase family 28 [Hirschia baltica ATCC 49814]
Length = 469
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 68/128 (53%), Gaps = 13/128 (10%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R VE N N+L+ ++ +SP IHPV RN V+G+ V+ PN DG +P
Sbjct: 215 YLRPSFVEFYNCENVLV-EDIHLKDSPFWNIHPVLSRNVIVRGVEVVG--HGPNNDGCNP 271
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+ CY ++G+ +A+KSG + DG +A PS NI +R GV IG E
Sbjct: 272 ESVDHMLIENCYFDTGDDCIAIKSGRNADGRRVAVPSENILIRNCQ-MKAGHGGVVIGSE 330
Query: 124 MSGRIFNV 131
+SG +FNV
Sbjct: 331 ISGDVFNV 338
>gi|225165583|ref|ZP_03727398.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
gi|224800169|gb|EEG18584.1| glycoside hydrolase family 28 [Diplosphaera colitermitum TAV2]
Length = 421
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 84/154 (54%), Gaps = 18/154 (11%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP-- 72
R +++E +N ++LI N+T +SP+ +HPV C N ++G+++L + PN DG+DP
Sbjct: 169 RPNMLEFINCRDVLI-ENVTLRDSPAYLVHPVGCENVTLRGLSILG--NGPNNDGIDPEY 225
Query: 73 -------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
DC +++G+ + +KSG D DG A RP+ N+ VRR+ G+ +G E+S
Sbjct: 226 CRNVLIEDCLVDTGDDCICLKSGRDQDGWAENRPTENVIVRRIRTRRGH-GGIVLGSELS 284
Query: 126 GRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEG 159
I NV V D ++G +R+ P G
Sbjct: 285 SGIRNVLVEDCDFSGTERG-----IRIKSAPGRG 313
>gi|448373202|ref|ZP_21557548.1| glycoside hydrolase family 28 [Natrialba aegyptia DSM 13077]
gi|445644701|gb|ELY97713.1| glycoside hydrolase family 28 [Natrialba aegyptia DSM 13077]
Length = 544
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 106/237 (44%), Gaps = 44/237 (18%)
Query: 9 STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTD 68
S+ H R L+++ ++ N+ +S +T NSP H VY N + + + +P APN D
Sbjct: 176 SSFTH-RPPLLQVFDAENV-TVSGVTLRNSPFWNTHVVYSENVTITDVNIENPADAPNGD 233
Query: 69 GLD---------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVG 119
G+D D YI +G+ + +KSG D +G + P+S I V + GV
Sbjct: 234 GIDIDSSRYVRISDAYINAGDDAICIKSGKDAEGREVGEPASQITVTNCT-VEAGHGGVV 292
Query: 120 IGREMSGRIFNVTVNH---------LDVWMQQ-QGSYKDRLRL----------------- 152
IG EMSG + +VTV + + + Q+ +G + LR
Sbjct: 293 IGSEMSGDVRDVTVTNCTFTDTDRGIRIKTQRGRGGVVEDLRFDQIVMRRIACPFVINGY 352
Query: 153 YGHPKEGWDPKAI----PKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
Y P + DP+ I P + +SF N+ + N A AG+ FE I ++V +
Sbjct: 353 YFTPLDS-DPEPIDEGTPLVRNVSFSNITARNVETAGFFAGLPERYFEGISFRDVRI 408
>gi|383155085|gb|AFG59707.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 70/133 (52%), Gaps = 29/133 (21%)
Query: 73 DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 132
DCY+ +G+ +A+KSGWD GI+ RPSSNI VRR++ +TP SG+ IG EMSG I ++
Sbjct: 2 DCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTP-FSGIAIGSEMSGGIRDIL 60
Query: 133 VNHLDVWMQQQG--------------------SYKDR----LRLYG----HPKEGWDPKA 164
V ++ ++ G Y D ++ G HP ++P A
Sbjct: 61 VENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPMA 120
Query: 165 IPKISGISFVNVV 177
+P + I+ +NVV
Sbjct: 121 LPVVGDIAVLNVV 133
>gi|448360766|ref|ZP_21549393.1| glycoside hydrolase family 28 [Natrialba asiatica DSM 12278]
gi|445652552|gb|ELZ05438.1| glycoside hydrolase family 28 [Natrialba asiatica DSM 12278]
Length = 522
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 106/237 (44%), Gaps = 44/237 (18%)
Query: 9 STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTD 68
S+ H R L+++ ++ N+ +S +T NSP H VY N + + + +P APN D
Sbjct: 154 SSFTH-RPPLLQVFDAENV-TVSGVTLRNSPFWNTHVVYSENVTITDVNIENPAGAPNGD 211
Query: 69 GLD---------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVG 119
G+D D YI +G+ + +KSG D +G + P+S I V + GV
Sbjct: 212 GIDIDSSRYVRISDAYINAGDDAICIKSGKDAEGREVGEPASQITVTNCT-VEAGHGGVV 270
Query: 120 IGREMSGRIFNVTVNH---------LDVWMQQ-QGSYKDRLRL----------------- 152
IG EMSG + +VTV + + + Q+ +G + LR
Sbjct: 271 IGSEMSGDVRDVTVTNCTFTDTDRGIRIKTQRGRGGVVEDLRFDQIVMRRIACPFVINGY 330
Query: 153 YGHPKEGWDPKAI----PKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
Y P + DP+ I P + +SF N+ + N A AG+ FE I ++V +
Sbjct: 331 YFTPLDS-DPEPIDEGTPLVRNVSFSNITARNVETAGFFAGLPERYFEGISFRDVRI 386
>gi|448413184|ref|ZP_21577030.1| glycoside hydrolase family 28 [Halosimplex carlsbadense 2-9-1]
gi|445667365|gb|ELZ20009.1| glycoside hydrolase family 28 [Halosimplex carlsbadense 2-9-1]
Length = 515
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 100/227 (44%), Gaps = 41/227 (18%)
Query: 18 LVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD------ 71
L ++ S+N+ + S +T NSP H VY N + + V +P APN DG+D
Sbjct: 161 LFQVDRSTNVSV-SGITLRNSPFWNTHVVYSDNVTLHDVNVENPADAPNGDGIDIDSSRY 219
Query: 72 ---PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 128
DCY+ +G+ V +KSG D +G + RP+S I V + GV IG EMSG +
Sbjct: 220 VRISDCYLNAGDDAVCIKSGKDEEGRRIGRPASGITVTNCT-VEAGHGGVVIGSEMSGDV 278
Query: 129 FNVTVNHLDVWMQQQGSYKDRLRLYGHPKE-------------------GW-------DP 162
+VTV++ +G R G E G+ DP
Sbjct: 279 RDVTVSNCTFTDTDRGIRIKTQRGRGGVVEDCRFDNLVMRRVACPFTINGYYFMDIDSDP 338
Query: 163 ----KAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
++ P + I++ ++++ + A AG+ +FE I NV +
Sbjct: 339 IPVDESTPMVRNIAYSDIIARDVETAGFFAGLPEQRFENISFSNVEI 385
>gi|395803596|ref|ZP_10482840.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434150|gb|EJG00100.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 522
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 12/133 (9%)
Query: 12 KHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD 71
K R + N NILI +TF NSP TI+P +C N V G+++ +P S PNTDG++
Sbjct: 180 KFFRPSFFQAYNCKNILI-EGVTFKNSPFWTINPEFCDNVRVTGISIFNPHS-PNTDGIN 237
Query: 72 P---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGR 122
P DC+I G+ + +KSG D DG + + N+ + + + GV IG
Sbjct: 238 PSSCTNVHISDCHISVGDDCITIKSGRDGDGRKYGKATENVTITNCTMLSGH-GGVVIGS 296
Query: 123 EMSGRIFNVTVNH 135
EMSG I +T+++
Sbjct: 297 EMSGGIKKITISN 309
>gi|356494975|ref|XP_003516356.1| PREDICTED: uncharacterized protein LOC100783583 [Glycine max]
Length = 1470
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WD + LK TR +++E+M S +I I SNLT NSPS +HP+Y + ++G+T+L+P+
Sbjct: 1118 WDKFHKGELKLTRPYMIEIMFSDHIQI-SNLTLINSPSWFVHPIYTSDIIIQGLTILAPV 1176
Query: 63 SAPNTDGLDP 72
+PNTDG+DP
Sbjct: 1177 DSPNTDGIDP 1186
>gi|407978683|ref|ZP_11159511.1| glycoside hydrolase [Bacillus sp. HYC-10]
gi|407414714|gb|EKF36344.1| glycoside hydrolase [Bacillus sp. HYC-10]
Length = 463
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 66/123 (53%), Gaps = 13/123 (10%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R ++ NILI +T +SP IHPV C N V+G+ ++ PNTDG++P
Sbjct: 210 YLRSSFIQPYQCQNILI-EGVTVKDSPMWQIHPVLCENVIVRGVNIIG--HGPNTDGVNP 266
Query: 73 ---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
DCY ++G+ +A+KSG + DG + PS NI +RR + GV IG E
Sbjct: 267 ESCRNVLIEDCYFDNGDDCIAIKSGRNEDGRRIGVPSENIVIRR-NEMRDGHGGVTIGSE 325
Query: 124 MSG 126
+SG
Sbjct: 326 ISG 328
>gi|448349773|ref|ZP_21538602.1| glycoside hydrolase family 28 [Natrialba taiwanensis DSM 12281]
gi|445639084|gb|ELY92202.1| glycoside hydrolase family 28 [Natrialba taiwanensis DSM 12281]
Length = 522
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 106/237 (44%), Gaps = 44/237 (18%)
Query: 9 STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTD 68
S+ H R L+++ ++ N+ +S +T NSP H VY N + + + +P APN D
Sbjct: 154 SSFTH-RPPLLQIFDAENV-TVSGVTLRNSPFWNTHVVYSENVTITDVNIENPAGAPNGD 211
Query: 69 GLD---------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVG 119
G+D D YI +G+ + +KSG D +G + P+S I V + GV
Sbjct: 212 GIDIDSSRYVRISDAYINAGDDAICIKSGKDAEGREVGEPASQITVANCT-VEAGHGGVV 270
Query: 120 IGREMSGRIFNVTVNH---------LDVWMQQ-QGSYKDRLRL----------------- 152
IG EMSG + +VTV++ + + Q+ +G + LR
Sbjct: 271 IGSEMSGDVRDVTVSNCTFTDTDRGIRIKTQRGRGGVVEDLRFDQIVMRRIACPFVINGY 330
Query: 153 YGHPKEGWDP----KAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
Y P + DP + P + +SF N+ + N A AG+ FE I ++V +
Sbjct: 331 YFTPLDS-DPEPTGEGTPLVRNVSFSNITARNVETAGFFAGLPERYFEGISFRDVRI 386
>gi|182416092|ref|YP_001821158.1| glycoside hydrolase [Opitutus terrae PB90-1]
gi|177843306|gb|ACB77558.1| glycoside hydrolase family 28 [Opitutus terrae PB90-1]
Length = 543
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 70/132 (53%), Gaps = 13/132 (9%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R + V N N+L+ T P+ TIHPVY N ++ + VL+ PN DG+DPD
Sbjct: 202 RPNFVVFFNCRNVLM-EGFTIGGGPNWTIHPVYSENIIIRRVHVLT--EGPNNDGIDPDS 258
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C ++G+ V +KSG++ DG +ARP+ N+ +R S G+ +G EMS
Sbjct: 259 CRNVLIEHCVFDTGDDCVVLKSGYNEDGWRVARPTENVVMRWCSSAR-GHGGLVVGSEMS 317
Query: 126 GRIFNVTVNHLD 137
G + NV ++ D
Sbjct: 318 GDVRNVYMHDCD 329
>gi|325972835|ref|YP_004249026.1| polygalacturonase [Sphaerochaeta globus str. Buddy]
gi|324028073|gb|ADY14832.1| Polygalacturonase [Sphaerochaeta globus str. Buddy]
Length = 453
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 71/129 (55%), Gaps = 11/129 (8%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R LV+++NS+N+ + LT NSP T+HP+Y N + VL+P APNTDG+D D
Sbjct: 161 RPPLVQILNSNNVKL-EGLTLQNSPFWTLHPLYSTNLIFMDLKVLNPKDAPNTDGIDVDS 219
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C ++ G+ +A+KSG DG+A +P+++I + + G IG E +
Sbjct: 220 CRFVTIKKCLVDVGDDGIALKSGSGPDGVATNKPTTDILIEECT-VKSAHGGAVIGSETA 278
Query: 126 GRIFNVTVN 134
I +V V+
Sbjct: 279 AGIRDVRVH 287
>gi|317474867|ref|ZP_07934137.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
gi|316909005|gb|EFV30689.1| glycosyl hydrolase family 28 [Bacteroides eggerthii 1_2_48FAA]
Length = 445
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 77/140 (55%), Gaps = 14/140 (10%)
Query: 7 WNSTL--KHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSA 64
W+STL + R ++L+ N+ I +T NSP T++P +C N VKG+T+ + + +
Sbjct: 180 WHSTLDRRFLRPPFIQLLRCRNVRI-EGITIVNSPFWTVNPNFCDNVTVKGVTI-NNVPS 237
Query: 65 PNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 115
PNTDG++P DC+I G+ + +KSG D + RP NI + + +
Sbjct: 238 PNTDGINPESCSNVHISDCHISVGDDCITIKSGRDLQARKIGRPCENITITNCTMLSGH- 296
Query: 116 SGVGIGREMSGRIFNVTVNH 135
GV IG EMSG + VT+++
Sbjct: 297 GGVVIGSEMSGGVKKVTISN 316
>gi|407791858|ref|ZP_11138936.1| polygalacturonase [Gallaecimonas xiamenensis 3-C-1]
gi|407198911|gb|EKE68937.1| polygalacturonase [Gallaecimonas xiamenensis 3-C-1]
Length = 495
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 39/221 (17%)
Query: 28 LIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYIES 78
++I +T NSP +HPV C++ V+G+T S PN DG DP+ C ++
Sbjct: 251 VLIEGVTLVNSPFWLLHPVLCQSVTVRGVTCRS--HGPNNDGCDPECCDHVVIEGCTFDT 308
Query: 79 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV------- 131
G+ +A+KSG + DG + + N+ VR G+ +G E+SG ++NV
Sbjct: 309 GDDCIAIKSGRNEDGRRVGQACRNLVVRNCQ-MKDGHGGLVLGSEISGGVYNVFLDNCQM 367
Query: 132 -------------------TVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKISGIS 172
T+ + + + G KD + + +EG + + +P++ I
Sbjct: 368 DSPELERAFRIKTNARRGGTIEGIRIRNLRVGEVKDAVSINFFYEEGQEGRFLPEVRDIH 427
Query: 173 FVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL-LVQAPSV 212
N+V + +A L G E + + N + V APSV
Sbjct: 428 IDNLVVRSAQRAFYLRGFASAPIEGVTLSNCRIDKVAAPSV 468
>gi|374316328|ref|YP_005062756.1| endopolygalacturonase [Sphaerochaeta pleomorpha str. Grapes]
gi|359351972|gb|AEV29746.1| endopolygalacturonase [Sphaerochaeta pleomorpha str. Grapes]
Length = 454
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 74/130 (56%), Gaps = 11/130 (8%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R LV++ +SS+IL+ +T +SP T+HP+Y RN K +++ +P +APNTDG+D D
Sbjct: 161 RPPLVQVKDSSDILL-EGITLEDSPFWTLHPLYSRNLVFKNLSIKNPKNAPNTDGIDLDS 219
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C I+ G+ +A+KSG DGI RP+ ++ + + + G IG E +
Sbjct: 220 CENVTIEGCVIDVGDDGIALKSGSGPDGILTGRPTKDVRIFQCT-VRNAHGGAVIGSETA 278
Query: 126 GRIFNVTVNH 135
I NV V++
Sbjct: 279 AGIHNVEVSN 288
>gi|146301824|ref|YP_001196415.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156242|gb|ABQ07096.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 522
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 72/133 (54%), Gaps = 12/133 (9%)
Query: 12 KHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD 71
K R + N NILI +TF NSP TI+P +C N V G+++ +P S PNTDG++
Sbjct: 180 KFFRPSFFQAYNCKNILI-EGVTFQNSPFWTINPEFCDNVTVTGISIFNPHS-PNTDGIN 237
Query: 72 P---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGR 122
P +C+I G+ + +KSG D DG + + N+ + + + GV IG
Sbjct: 238 PSSCTNVHISNCHISVGDDCITIKSGRDGDGRKYGKATENVTITNCTMLSGH-GGVVIGS 296
Query: 123 EMSGRIFNVTVNH 135
EMSG I +T+++
Sbjct: 297 EMSGGIKKITISN 309
>gi|404405418|ref|ZP_10997002.1| glycoside hydrolase family protein [Alistipes sp. JC136]
Length = 1278
Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/123 (36%), Positives = 69/123 (56%), Gaps = 13/123 (10%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R ++E +N +++LI +TF +SP IHP+ C N V+G+TV S N DG DP
Sbjct: 192 YLRPAMLEPVNCTDVLI-EGVTFVDSPFWVIHPLACENVTVRGVTVDS--YNLNNDGCDP 248
Query: 73 ---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
DC +G+ +A+KSG D+D + RP+ N+ +R S + +GV IG E
Sbjct: 249 ESCTNVLIEDCTFRTGDDGIAIKSGRDNDAWRIGRPTENVLIRNCSFRS-KANGVCIGSE 307
Query: 124 MSG 126
+SG
Sbjct: 308 ISG 310
>gi|399031128|ref|ZP_10731267.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398070597|gb|EJL61889.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 524
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 14/144 (9%)
Query: 3 WDLWWNSTL-KHT-RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
++ ++ T+ KH R + N NILI +TF NSP TI+P +C N V G+T+ +
Sbjct: 171 YEPYYKRTIDKHFFRPSFFQAYNCKNILI-EGVTFKNSPFWTINPEFCDNVTVTGITINN 229
Query: 61 PLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P S PNTDG++P +C+I G+ + +KSG D DG + + N+ + +
Sbjct: 230 PHS-PNTDGINPSSCTNVHISNCHISVGDDCITIKSGRDADGRKYGKATENVTITNCT-M 287
Query: 112 TPTCSGVGIGREMSGRIFNVTVNH 135
GV IG EMSG I +T+++
Sbjct: 288 LSGHGGVVIGSEMSGGIKKITISN 311
>gi|361067449|gb|AEW08036.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155067|gb|AFG59698.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155071|gb|AFG59700.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 29/133 (21%)
Query: 73 DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 132
DCY+ +G+ +A+KSGWD GI+ RPSSNI VRR++ +TP SG+ IG E SG I ++
Sbjct: 2 DCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTP-FSGIAIGSETSGGIRDIL 60
Query: 133 VNHLDVWMQQQG--------------------SYKDR----LRLYG----HPKEGWDPKA 164
V ++ ++ G Y D ++ G HP ++P A
Sbjct: 61 VENISIYSSSVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPMA 120
Query: 165 IPKISGISFVNVV 177
+P + I+ +NVV
Sbjct: 121 LPVVGDIAVLNVV 133
>gi|347530390|ref|YP_004837153.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
gi|345500538|gb|AEN95221.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
Length = 382
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 103/235 (43%), Gaps = 45/235 (19%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R ++ +N ++ + + T + P TIHPVYC + V+G+TV + PNTDG +PD
Sbjct: 146 RPSFIQFINCKHV-TLEDFTIEDGPQWTIHPVYCEDVVVRGVTVNT--KGPNTDGCNPDS 202
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR--RVSGTTPTCSGVGIGRE 123
C E+G+ +A+ SG + DG + RP I V+ R G + V IG
Sbjct: 203 CRKVLIEDCTFETGDDCIAINSGMNEDGWRVGRPCEQIEVKNCRFIGGH---AAVAIGSG 259
Query: 124 MSGRIFNVTVNHLDVW----------MQQQGSYKDRLRLYGHPKEGWDPKAI-------- 165
MSG I ++ ++ M+ +G Y R+ + + + +AI
Sbjct: 260 MSGGICDIWIHDCVARGTERGIRIKSMRGRGGYVKRVNVERMQMDEIEKEAIEVSMNYGS 319
Query: 166 ----------PKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLVQAP 210
P+ S + F ++ + L G+ + EI +++VS+ + P
Sbjct: 320 STAVPVSQKAPEFSELRFAHIRGNHAAIGVSLCGLPESPLREITLEDVSIAAEDP 374
>gi|383155065|gb|AFG59697.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155069|gb|AFG59699.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155073|gb|AFG59701.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155075|gb|AFG59702.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155077|gb|AFG59703.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155079|gb|AFG59704.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155081|gb|AFG59705.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155093|gb|AFG59711.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155095|gb|AFG59712.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155097|gb|AFG59713.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 29/133 (21%)
Query: 73 DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 132
DCY+ +G+ +A+KSGWD GI+ RPSSNI VRR++ +TP SG+ IG E SG I ++
Sbjct: 2 DCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTP-FSGIAIGSETSGGIRDIL 60
Query: 133 VNHLDVWMQQQG--------------------SYKDR----LRLYG----HPKEGWDPKA 164
V ++ ++ G Y D ++ G HP ++P A
Sbjct: 61 VENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPMA 120
Query: 165 IPKISGISFVNVV 177
+P + I+ +NVV
Sbjct: 121 LPVVGDIAVLNVV 133
>gi|59044763|gb|AAW84064.1| pectate lyase [uncultured bacterium]
Length = 466
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 73/148 (49%), Gaps = 25/148 (16%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W L+ H R L+ +ILI +T NSP+ TI+PV C + +T+++P
Sbjct: 122 WRLFRAKAFTHPRPRLIAFTRCKDILI-EGVTLVNSPAWTINPVMCERVTIDKVTIINPP 180
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMAR-PSSNIAV-----RR 107
+PNTDG+DPD CYI+ G+ +A+K+G + ++ R P NI + R
Sbjct: 181 DSPNTDGIDPDSSRNVYITNCYIDVGDDCIAIKAGRED---SLYRTPCENIVIANCLMRH 237
Query: 108 VSGTTPTCSGVGIGREMSGRIFNVTVNH 135
G GV IG E SG I V + +
Sbjct: 238 GHG------GVVIGSETSGGIRKVVITN 259
>gi|116620373|ref|YP_822529.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116223535|gb|ABJ82244.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 446
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 74/136 (54%), Gaps = 11/136 (8%)
Query: 9 STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTD 68
+ L++ R H+++L+ S ++ +I L NS S T++P+ C + G+T+ +P+ +PNTD
Sbjct: 159 AKLEYGRPHMIKLVRSKHV-VIEGLHLINSASWTVNPLLCEFVRIDGITIENPVPSPNTD 217
Query: 69 GLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVG 119
G++P+ I+ G+ V +KSG D G + RP NI + V
Sbjct: 218 GINPESCRNVQILNSRIDVGDDCVTLKSGKDEAGRRVGRPDENITITNCV-MLKGHGAVT 276
Query: 120 IGREMSGRIFNVTVNH 135
IG EMSG + NV V++
Sbjct: 277 IGSEMSGGVRNVVVSN 292
>gi|389574386|ref|ZP_10164450.1| glycoside hydrolase [Bacillus sp. M 2-6]
gi|388425994|gb|EIL83815.1| glycoside hydrolase [Bacillus sp. M 2-6]
Length = 463
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 66/123 (53%), Gaps = 13/123 (10%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R ++ N NILI +T +SP +HPV N V+G+ ++ PNTDG++P
Sbjct: 210 YLRSSFIQPYNCQNILI-EGVTVKDSPMWQVHPVLSENVIVRGVNIIG--HGPNTDGVNP 266
Query: 73 ---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
DCY ++G+ +A+KSG + DG + PS NI +RR + GV IG E
Sbjct: 267 ESCRHVLIEDCYFDNGDDCIAIKSGRNEDGRRIGVPSENIVIRR-NTMRDGHGGVTIGSE 325
Query: 124 MSG 126
+SG
Sbjct: 326 ISG 328
>gi|257889036|ref|ZP_05668689.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,141,733]
gi|257825099|gb|EEV52022.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,141,733]
Length = 445
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 27/149 (18%)
Query: 6 WWNS------TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
WWN+ L + R L+ N I + ++ SPS TI+P+ C N +T+L
Sbjct: 113 WWNTFRNEPDNLAYPRPKLMSFHNCHRI-TVKDIKLIQSPSWTINPILCSNATFDNLTIL 171
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG+DP+ C+I+ G+ +A+K+G + IA ++
Sbjct: 172 NPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-------TYERIACENITI 224
Query: 111 TTPTC----SGVGIGREMSGRIFNVTVNH 135
T T GV +G EMSG I N+T+++
Sbjct: 225 TNCTMVHGHGGVVLGSEMSGSIRNITISN 253
>gi|431753622|ref|ZP_19542291.1| polygalacturonase [Enterococcus faecium E2620]
gi|430611655|gb|ELB48732.1| polygalacturonase [Enterococcus faecium E2620]
Length = 445
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 27/149 (18%)
Query: 6 WWNS------TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
WWN+ L + R L+ N I + ++ SPS TI+P+ C N +T+L
Sbjct: 113 WWNTFRNEPDNLAYPRPKLMSFHNCHRI-TVKDIKLIQSPSWTINPILCSNATFDNLTIL 171
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG+DP+ C+I+ G+ +A+K+G + IA ++
Sbjct: 172 NPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-------TYERIACENITI 224
Query: 111 TTPTC----SGVGIGREMSGRIFNVTVNH 135
T T GV +G EMSG I N+T+++
Sbjct: 225 TNCTMVHGHGGVVLGSEMSGSIRNITISN 253
>gi|384566069|ref|ZP_10013173.1| endopolygalacturonase [Saccharomonospora glauca K62]
gi|384521923|gb|EIE99118.1| endopolygalacturonase [Saccharomonospora glauca K62]
Length = 491
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 103/230 (44%), Gaps = 45/230 (19%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R + V+ SS IL+ S +T NSP IHPV N V G+T+ SP PN+DG++P+
Sbjct: 221 RPNFVQFYRSSTILV-SGVTLTNSPMWMIHPVLSENVLVDGVTLDSP-DGPNSDGVNPES 278
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAV---RRVSGTTPTCSGVGIGR 122
+G+ +AVKSG + DG + PS NI + R +G GV IG
Sbjct: 279 SRNVVIRNSRFNNGDDCIAVKSGRNADGRRIGVPSENIVIHDNRMFAG----HGGVVIGS 334
Query: 123 EMSGRIFNVTVN-------HLDVWMQQQGS-----------YKDR---------LRLYGH 155
EMSG + NV HLD ++ + + ++D +R+ H
Sbjct: 335 EMSGDVRNVFAERNVMNSPHLDRALRIKTNSVRGGTVEGVYFRDNDVPAVADAVIRINFH 394
Query: 156 PKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
+EG P + GI NV SV A L G + +I +++ +
Sbjct: 395 YEEGDVGDFTPTVRGIHIDNVHSVGGEFALYLRGYERSPITDITIRDSTF 444
>gi|146295422|ref|YP_001179193.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145408998|gb|ABP66002.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 447
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 13/144 (9%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
M W L N LK+ R V N+ I + NSPS T++P+ C N V + + +
Sbjct: 115 MWWKLHRNKELKYPRPRTVCFYRCKNVTI-EGIKIVNSPSWTVNPIECENVTVHNVKIQN 173
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P +PNTDG++P+ CYI+ G+ V +KSG + + + P NIA+
Sbjct: 174 PYDSPNTDGINPESCEGVRISNCYIDVGDDCVTLKSGTEDCKVRI--PCENIAITNCI-M 230
Query: 112 TPTCSGVGIGREMSGRIFNVTVNH 135
G+ IG EMSG + NV +++
Sbjct: 231 AHGHGGIVIGSEMSGGVRNVVISN 254
>gi|255641025|gb|ACU20792.1| unknown [Glycine max]
Length = 243
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + LK+TR +L+ELM S I I SNLT NSPS +HPVY N +KG+T+++P+
Sbjct: 178 WQKFHKKKLKYTRPYLIELMFSDQIQI-SNLTLLNSPSWNLHPVYSSNIIIKGLTIIAPV 236
Query: 63 SAPNTDG 69
+PNTDG
Sbjct: 237 PSPNTDG 243
>gi|430837653|ref|ZP_19455615.1| polygalacturonase [Enterococcus faecium E0680]
gi|430840334|ref|ZP_19458261.1| polygalacturonase [Enterococcus faecium E0688]
gi|430859274|ref|ZP_19476887.1| polygalacturonase [Enterococcus faecium E1552]
gi|430487167|gb|ELA63937.1| polygalacturonase [Enterococcus faecium E0680]
gi|430489820|gb|ELA66395.1| polygalacturonase [Enterococcus faecium E0688]
gi|430544018|gb|ELA84068.1| polygalacturonase [Enterococcus faecium E1552]
Length = 445
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 27/149 (18%)
Query: 6 WWNS------TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
WW++ L + R L+ N I + N+ SPS TI+P+ C N +T+L
Sbjct: 113 WWHTFRNEPDNLAYPRPKLMSFHNCHRI-TVKNIKLIQSPSWTINPILCSNATFDNLTIL 171
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG+DP+ C+I+ G+ +A+K+G + IA ++
Sbjct: 172 NPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-------TYERIACENITI 224
Query: 111 TTPTC----SGVGIGREMSGRIFNVTVNH 135
T T GV +G EMSG I N+T+++
Sbjct: 225 TNCTMVHGHGGVVLGSEMSGSIRNITISN 253
>gi|423215151|ref|ZP_17201679.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
gi|392692414|gb|EIY85652.1| hypothetical protein HMPREF1074_03211 [Bacteroides xylanisolvens
CL03T12C04]
Length = 513
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 70/136 (51%), Gaps = 20/136 (14%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL---SAPNTDGLD 71
R ++ +N+LI N+ NSP TI+P +C N V G+T+ +P PNTDG++
Sbjct: 187 RPPFIQFYECNNVLI-ENVKIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGIN 245
Query: 72 P---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVG 119
P DC+I G+ + +KSG D DG + NI + +SG GV
Sbjct: 246 PSSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGH----GGVV 301
Query: 120 IGREMSGRIFNVTVNH 135
IG EMSG + VT+++
Sbjct: 302 IGSEMSGGVRRVTISN 317
>gi|89098529|ref|ZP_01171412.1| hypothetical protein B14911_09967 [Bacillus sp. NRRL B-14911]
gi|89086774|gb|EAR65892.1| hypothetical protein B14911_09967 [Bacillus sp. NRRL B-14911]
Length = 443
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 23/148 (15%)
Query: 3 WDLWWN--STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
WD++ N LK+ R L+ + +I + ++ NSPS T++P+ CR+ V +++L+
Sbjct: 116 WDVFRNRREELKYPRPKLISFDHCEHI-TLRDVRLINSPSWTVNPICCRDITVDNVSILN 174
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P +PNTDG+DP+ C+I+ G+ +A+KSG + +A ++ T
Sbjct: 175 PADSPNTDGIDPESCRNVRISNCHIDVGDDCIAIKSGTED-------TEERVACENITIT 227
Query: 112 TPTC----SGVGIGREMSGRIFNVTVNH 135
T V G EMSG I NVT+++
Sbjct: 228 NCTMVHGHGAVVFGSEMSGDIRNVTISN 255
>gi|160880868|ref|YP_001559836.1| glycoside hydrolase family protein [Clostridium phytofermentans
ISDg]
gi|160429534|gb|ABX43097.1| glycoside hydrolase family 28 [Clostridium phytofermentans ISDg]
Length = 518
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 85/183 (46%), Gaps = 23/183 (12%)
Query: 6 WWNSTLKHT---RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WWN+ R L+ +N N + + +T NSP IHP + + +T+L+P
Sbjct: 209 WWNNPKVRNIAWRPRLI-FLNHCNNITVQGITVKNSPCWNIHPYFSDDLKFVDLTILNPK 267
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDGLDP+ Y G+ +A+KSG + G RPS N+ +R+
Sbjct: 268 DSPNTDGLDPESCKNVLIVGVYFSLGDDCIAIKSGKIYMGAKHKRPSENLEIRQCCMRDG 327
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISF 173
S + IG EM+G + N+TV +G LR+ G D AI I G+ F
Sbjct: 328 HGS-ITIGSEMAGGVKNLTVRECLFIHTDRG-----LRIKTRRGRGKD--AI--IDGVLF 377
Query: 174 VNV 176
N+
Sbjct: 378 ENI 380
>gi|160885582|ref|ZP_02066585.1| hypothetical protein BACOVA_03584 [Bacteroides ovatus ATCC 8483]
gi|299147452|ref|ZP_07040517.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|423290253|ref|ZP_17269102.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|423294451|ref|ZP_17272578.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
gi|156109204|gb|EDO10949.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|298514730|gb|EFI38614.1| polygalacturonase (Pectinase) [Bacteroides sp. 3_1_23]
gi|392665640|gb|EIY59163.1| hypothetical protein HMPREF1069_04145 [Bacteroides ovatus
CL02T12C04]
gi|392675642|gb|EIY69083.1| hypothetical protein HMPREF1070_01243 [Bacteroides ovatus
CL03T12C18]
Length = 513
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 70/136 (51%), Gaps = 20/136 (14%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL---SAPNTDGLD 71
R ++ +N+LI N+ NSP TI+P +C N V G+T+ +P PNTDG++
Sbjct: 187 RPPFIQFYECNNVLI-ENVKIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGIN 245
Query: 72 P---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVG 119
P DC+I G+ + +KSG D DG + NI + +SG GV
Sbjct: 246 PSSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGH----GGVV 301
Query: 120 IGREMSGRIFNVTVNH 135
IG EMSG + VT+++
Sbjct: 302 IGSEMSGGVRRVTISN 317
>gi|383155083|gb|AFG59706.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155087|gb|AFG59708.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155089|gb|AFG59709.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
gi|383155091|gb|AFG59710.1| Pinus taeda anonymous locus 0_17434_01 genomic sequence
Length = 138
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 29/133 (21%)
Query: 73 DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 132
DCY+ +G+ +A+KSGWD GI+ RPSSNI VRR++ +TP SG+ IG E SG I ++
Sbjct: 2 DCYVSNGDDGIAIKSGWDEYGISFNRPSSNIIVRRITISTP-FSGIAIGSETSGGIRDIL 60
Query: 133 VNHLDVWMQQQG--------------------SYKDR----LRLYG----HPKEGWDPKA 164
V ++ ++ G Y D ++ G HP ++P A
Sbjct: 61 VENISIYSSTVGIRVKTNVGRGGIIRNITFSHIYLDNVGTGIKFSGNTGDHPDARYNPMA 120
Query: 165 IPKISGISFVNVV 177
+P + I+ ++VV
Sbjct: 121 LPVVGDIAVLDVV 133
>gi|336415217|ref|ZP_08595558.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
gi|335941250|gb|EGN03108.1| hypothetical protein HMPREF1017_02666 [Bacteroides ovatus
3_8_47FAA]
Length = 513
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 70/136 (51%), Gaps = 20/136 (14%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL---SAPNTDGLD 71
R ++ +N+LI N+ NSP TI+P +C N V G+T+ +P PNTDG++
Sbjct: 187 RPPFIQFYECNNVLI-ENVKIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGIN 245
Query: 72 P---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVG 119
P DC+I G+ + +KSG D DG + NI + +SG GV
Sbjct: 246 PSSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGH----GGVV 301
Query: 120 IGREMSGRIFNVTVNH 135
IG EMSG + VT+++
Sbjct: 302 IGSEMSGGVRRVTISN 317
>gi|255692376|ref|ZP_05416051.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260621842|gb|EEX44713.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 513
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 70/136 (51%), Gaps = 20/136 (14%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL---SAPNTDGLD 71
R ++ +N+LI N+ NSP TI+P +C N V G+T+ +P PNTDG++
Sbjct: 187 RPPFIQFYECNNVLI-ENVRIVNSPFWTINPAFCDNVTVHGVTIYNPSKDPKGPNTDGIN 245
Query: 72 P---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVG 119
P DC+I G+ + +KSG D DG + NI + +SG GV
Sbjct: 246 PSSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCVMLSGH----GGVV 301
Query: 120 IGREMSGRIFNVTVNH 135
IG EMSG + VT+++
Sbjct: 302 IGSEMSGGVRRVTISN 317
>gi|391227888|ref|ZP_10264095.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
gi|391223381|gb|EIQ01801.1| endopolygalacturonase [Opitutaceae bacterium TAV1]
Length = 916
Score = 70.1 bits (170), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 12/115 (10%)
Query: 28 LIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP--LSAPNTDGLDPD---------CYI 76
++I +TF +SPS T+ PV+C + ++ T+L+P L + NTDG+DPD C +
Sbjct: 185 VLIEGVTFRDSPSWTLQPVWCSDLIIRHSTILNPPSLFSHNTDGIDPDACRNVLIEHCVV 244
Query: 77 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 131
++G+ + +K+G D D PS NI +R G+ IG EMS + N+
Sbjct: 245 DTGDDAICIKAGRDEDAWEAGIPSENILIRHCE-IRSGHGGITIGSEMSAGVRNL 298
>gi|413941560|gb|AFW74209.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
gi|413941561|gb|AFW74210.1| hypothetical protein ZEAMMB73_002485 [Zea mays]
Length = 280
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRN 50
M W+LW N TL HTRGHL+EL+NS+N+L IS++T NSP T+HPVYCR+
Sbjct: 210 MWWELWRNRTLNHTRGHLIELVNSTNVL-ISSVTLSNSPFWTVHPVYCRS 258
>gi|284172853|ref|YP_003406235.1| glycoside hydrolase family 28 [Haloterrigena turkmenica DSM 5511]
gi|284017613|gb|ADB63562.1| glycoside hydrolase family 28 [Haloterrigena turkmenica DSM 5511]
Length = 541
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 102/241 (42%), Gaps = 42/241 (17%)
Query: 9 STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTD 68
S+ H R L ++ S N+ + S +T NSP H VY N + + + +P APN D
Sbjct: 179 SSFTH-RPPLFQISESENVSV-SGVTLENSPFWNTHVVYSENVTITDVNIANPADAPNGD 236
Query: 69 GLD---------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVG 119
G+D D YI +G+ + +KSG + +G + P+S I V + GV
Sbjct: 237 GIDIDSSRYVRISDTYINAGDDAICIKSGKNAEGREVGEPASQITVTNCT-VEAGHGGVV 295
Query: 120 IGREMSGRIFNVTVNHLDVWMQQQG----SYKDR------LRL----------------- 152
IG EMSG + +VTV++ +G + +DR LR
Sbjct: 296 IGSEMSGDVRDVTVSNCTFTDTDRGVRIKTARDRGGVVEDLRFDNIVMRRIACPFTINGY 355
Query: 153 YGHPKEG-WDP--KAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLVQA 209
Y P + +P + P + +SF N+ + A AG+ FE I +V +
Sbjct: 356 YFMPLDSDSEPVDEGTPMVRNVSFTNITARQVETAGFFAGLPEQYFEGISFNDVQIDATR 415
Query: 210 P 210
P
Sbjct: 416 P 416
>gi|379724921|ref|YP_005317052.1| hypothetical protein PM3016_7335 [Paenibacillus mucilaginosus 3016]
gi|378573593|gb|AFC33903.1| hypothetical protein PM3016_7335 [Paenibacillus mucilaginosus 3016]
Length = 506
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 11/130 (8%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD--- 71
R L++LM+ + ++ +T NSP H VYC + ++G+ +P + PN DGLD
Sbjct: 163 RPPLLQLMHCEEV-VLEGITLQNSPFWNTHLVYCDDVSLRGVKFKNPSTTPNGDGLDVDS 221
Query: 72 ------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
DC+ + G+ + +KSG D DG + RP+ N+AV + GV +G E +
Sbjct: 222 CSNVRISDCHFDVGDDCLCLKSGIDEDGRRVGRPTENVAVTNCT-MLHGHGGVVLGSETA 280
Query: 126 GRIFNVTVNH 135
G I NVT+++
Sbjct: 281 GGIRNVTISN 290
>gi|218129085|ref|ZP_03457889.1| hypothetical protein BACEGG_00659 [Bacteroides eggerthii DSM 20697]
gi|217988720|gb|EEC55039.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 445
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 76/140 (54%), Gaps = 14/140 (10%)
Query: 7 WNSTL--KHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSA 64
W+STL + R ++ + N+ I +T NSP T++P +C N VKG+T+ + + +
Sbjct: 180 WHSTLDRRFLRPPFIQPLRCRNVRI-EGITIVNSPFWTVNPNFCDNVTVKGVTI-NNVPS 237
Query: 65 PNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 115
PNTDG++P DC+I G+ + +KSG D + RP NI + + +
Sbjct: 238 PNTDGINPESCSNVHISDCHISVGDDCITIKSGRDLQARKIGRPCENITITNCTMLSGH- 296
Query: 116 SGVGIGREMSGRIFNVTVNH 135
GV IG EMSG + VT+++
Sbjct: 297 GGVVIGSEMSGGVKKVTISN 316
>gi|340751772|ref|ZP_08688582.1| glycoside hydrolase [Fusobacterium mortiferum ATCC 9817]
gi|229420732|gb|EEO35779.1| glycoside hydrolase [Fusobacterium mortiferum ATCC 9817]
Length = 512
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 66/133 (49%), Gaps = 10/133 (7%)
Query: 21 LMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC-----Y 75
+NS ++I + NSPS TIHP N + + +P +PNTDG+DP+ Y
Sbjct: 224 FLNSCENVVIEGIKIMNSPSWTIHPFLTNNLRFINLKIENPADSPNTDGIDPESCENVEY 283
Query: 76 I----ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 131
I G+ +A+KSG + G + +PS N ++ S GV IG EMSG + N+
Sbjct: 284 IGIDFSVGDDCIAIKSGKLYLGKVLNKPSKNFIIKNCS-MKYGHGGVVIGSEMSGGVENI 342
Query: 132 TVNHLDVWMQQQG 144
+ D + +G
Sbjct: 343 NIEKCDFYKTDKG 355
>gi|386727675|ref|YP_006194001.1| hypothetical protein B2K_37015 [Paenibacillus mucilaginosus K02]
gi|384094800|gb|AFH66236.1| hypothetical protein B2K_37015 [Paenibacillus mucilaginosus K02]
Length = 505
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 11/130 (8%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD--- 71
R L++LM+ + ++ +T NSP H VYC + ++G+ +P + PN DGLD
Sbjct: 162 RPPLLQLMHCEEV-VLEGITLQNSPFWNTHLVYCDDVSLRGVKFKNPSTTPNGDGLDVDS 220
Query: 72 ------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
DC+ + G+ + +KSG D DG + RP+ N+AV + GV +G E +
Sbjct: 221 CSNVRISDCHFDVGDDCLCLKSGIDEDGRRVGRPTENVAVTNCT-MLHGHGGVVLGSETA 279
Query: 126 GRIFNVTVNH 135
G I NVT+++
Sbjct: 280 GGIRNVTISN 289
>gi|269957316|ref|YP_003327105.1| glycoside hydrolase family 28 [Xylanimonas cellulosilytica DSM
15894]
gi|269305997|gb|ACZ31547.1| glycoside hydrolase family 28 [Xylanimonas cellulosilytica DSM
15894]
Length = 459
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 21/144 (14%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W+ + TL H R LV L +++ + ++T +SP+ T+HP+ C + V+ +T+++P
Sbjct: 124 WEAFRAGTLAHPRPTLVGLHRCTHVRL-RDVTLRSSPAWTVHPLLCDDVAVRDVTIVNPP 182
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG+DP+ C+I+ G+ +A+K+G + A P +A V T
Sbjct: 183 DSPNTDGIDPESCRNVRISGCHIDVGDDCIALKAGTE------ASP-ERVACENVVVTGC 235
Query: 114 TC----SGVGIGREMSGRIFNVTV 133
T GV +G EMSG I NV V
Sbjct: 236 TLVHGHGGVVLGSEMSGGIRNVVV 259
>gi|397691596|ref|YP_006528850.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
gi|395813088|gb|AFN75837.1| glycoside hydrolase family 28 [Melioribacter roseus P3M]
Length = 463
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 99/232 (42%), Gaps = 47/232 (20%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R + V+ S NILI +TF NSP +HPV N ++ + + PN DG DP
Sbjct: 209 YLRPNFVQFYKSKNILI-EGVTFKNSPMWFLHPVLSENIIIRNVKTIG--HGPNNDGCDP 265
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+ CY ++G+ +A+KSG ++DG + PS NI +R + GV IG E
Sbjct: 266 ESCKNVLIEGCYFDNGDDCIAIKSGRNNDGRRINAPSENIIIRNCT-MKDGHGGVVIGSE 324
Query: 124 MSG------------------RIFNV--------TVNHLDVWMQQQGSYKD---RLRLYG 154
+SG R+ + V H+ V + G + R+ ++
Sbjct: 325 ISGGCRFVFAEECKMDSPNLDRMLRIKSNTVRGGVVEHVYVRNIEVGEVSNAIVRMNMFY 384
Query: 155 HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLL 206
PKE PK I NV S + A G+ EE ++NV ++
Sbjct: 385 DPKEIGPRDFPPKFRNIRVENVTSRKSDYALEFLGL-----EESPIENVEII 431
>gi|430842911|ref|ZP_19460818.1| polygalacturonase [Enterococcus faecium E1007]
gi|431064168|ref|ZP_19493515.1| polygalacturonase [Enterococcus faecium E1604]
gi|431131393|ref|ZP_19498944.1| polygalacturonase [Enterococcus faecium E1613]
gi|431602171|ref|ZP_19522547.1| polygalacturonase [Enterococcus faecium E1861]
gi|431742395|ref|ZP_19531288.1| polygalacturonase [Enterococcus faecium E2039]
gi|430492622|gb|ELA68986.1| polygalacturonase [Enterococcus faecium E1007]
gi|430565953|gb|ELB05076.1| polygalacturonase [Enterococcus faecium E1613]
gi|430568809|gb|ELB07839.1| polygalacturonase [Enterococcus faecium E1604]
gi|430589939|gb|ELB28031.1| polygalacturonase [Enterococcus faecium E1861]
gi|430600153|gb|ELB37811.1| polygalacturonase [Enterococcus faecium E2039]
Length = 445
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 90/191 (47%), Gaps = 33/191 (17%)
Query: 6 WWNS------TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
WW++ L + R L+ N I + ++ SPS TI+P+ C N +T+L
Sbjct: 113 WWHTFRNEPDNLAYPRPKLMSFHNCHRI-TVKDIKLIQSPSWTINPILCSNATFDNLTIL 171
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG+DP+ C+I+ G+ +A+K+G + IA ++
Sbjct: 172 NPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-------TYERIACENITI 224
Query: 111 TTPTC----SGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIP 166
T T GV +G EMSG I N+T+++ +G +RL G + + I
Sbjct: 225 TNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQETDRG-----IRLKSRRGRGGNVEDI- 278
Query: 167 KISGISFVNVV 177
++S I NV+
Sbjct: 279 RVSNIVMDNVM 289
>gi|154502614|ref|ZP_02039674.1| hypothetical protein RUMGNA_00427 [Ruminococcus gnavus ATCC 29149]
gi|153796806|gb|EDN79226.1| polygalacturonase (pectinase) [Ruminococcus gnavus ATCC 29149]
Length = 532
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 69/145 (47%), Gaps = 14/145 (9%)
Query: 3 WDLWWNSTLKHTRGHL---VELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
W+ WW K RG + +N + I+ +T NSPS IHP +C + G+TVL
Sbjct: 215 WENWWLDA-KEVRGAARPRMIFLNRCEDVTITGITVQNSPSWNIHPYFCSHLKFIGVTVL 273
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
P +PNTDGL+P+ C G+ +AVK+G G PSSNI +R+
Sbjct: 274 GPKVSPNTDGLNPESCDDVEITGCLFSVGDDCIAVKAGKISVGAKYKVPSSNIRIRQCCM 333
Query: 111 TTPTCSGVGIGREMSGRIFNVTVNH 135
S + +G EM+ I N+
Sbjct: 334 RDGHGS-ITLGSEMAAGIKNLQARQ 357
>gi|393781486|ref|ZP_10369681.1| hypothetical protein HMPREF1071_00549 [Bacteroides salyersiae
CL02T12C01]
gi|392676549|gb|EIY69981.1| hypothetical protein HMPREF1071_00549 [Bacteroides salyersiae
CL02T12C01]
Length = 501
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 70/136 (51%), Gaps = 20/136 (14%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL---SAPNTDGLD 71
R ++ +NI +I N+ NSP TI+P +C N V G+T+ +P PNTDG++
Sbjct: 190 RPPFIQFFECNNI-VIENVKIINSPFWTINPAFCDNITVHGVTINNPSKNPKGPNTDGIN 248
Query: 72 P---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVG 119
P DC+I G+ + +KSG D DG +P N+ + +SG GV
Sbjct: 249 PTSCSNVRISDCFISVGDDCITIKSGRDADGRKYGKPCQNLTITNCIMLSGH----GGVV 304
Query: 120 IGREMSGRIFNVTVNH 135
IG EMSG + V +++
Sbjct: 305 IGSEMSGGVKRVAISN 320
>gi|293571108|ref|ZP_06682148.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E980]
gi|431739345|ref|ZP_19528280.1| polygalacturonase [Enterococcus faecium E1972]
gi|291608838|gb|EFF38120.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E980]
gi|430596073|gb|ELB33930.1| polygalacturonase [Enterococcus faecium E1972]
Length = 445
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 90/191 (47%), Gaps = 33/191 (17%)
Query: 6 WWNS------TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
WW++ L + R L+ N I + ++ SPS TI+P+ C N +T+L
Sbjct: 113 WWHTFRNEPDNLAYPRPKLMSFHNCHRI-TVKDIKLIQSPSWTINPILCSNATFDNLTIL 171
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG+DP+ C+I+ G+ +A+K+G + IA ++
Sbjct: 172 NPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-------TYERIACENITI 224
Query: 111 TTPTC----SGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIP 166
T T GV +G EMSG I N+T+++ +G +RL G + + I
Sbjct: 225 TNCTMVHGHGGVVLGSEMSGSIRNITISNCIFQETDRG-----IRLKSRRGRGGNVEDI- 278
Query: 167 KISGISFVNVV 177
++S I NV+
Sbjct: 279 RVSNIVMDNVM 289
>gi|430860956|ref|ZP_19478551.1| polygalacturonase [Enterococcus faecium E1573]
gi|430551274|gb|ELA91043.1| polygalacturonase [Enterococcus faecium E1573]
Length = 445
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 27/149 (18%)
Query: 6 WWNS------TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
WW++ L + R L+ N I + ++ SPS TI+P+ C N +T+L
Sbjct: 113 WWHTFRNEPDNLAYPRPKLMSFHNCHRI-TVKDIKLIQSPSWTINPILCSNATFDNLTIL 171
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG+DP+ C+I+ G+ +A+K+G + IA ++
Sbjct: 172 NPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-------TYERIACENITI 224
Query: 111 TTPTC----SGVGIGREMSGRIFNVTVNH 135
T T GV +G EMSG I N+T+++
Sbjct: 225 TNCTMVHGHGGVVLGSEMSGSIRNITISN 253
>gi|431050714|ref|ZP_19493383.1| polygalacturonase [Enterococcus faecium E1590]
gi|431764029|ref|ZP_19552575.1| polygalacturonase [Enterococcus faecium E3548]
gi|430560252|gb|ELA99556.1| polygalacturonase [Enterococcus faecium E1590]
gi|430621333|gb|ELB58100.1| polygalacturonase [Enterococcus faecium E3548]
Length = 445
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 27/149 (18%)
Query: 6 WWNS------TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
WW++ L + R L+ N I + ++ SPS TI+P+ C N +T+L
Sbjct: 113 WWHTFRNEPDNLAYPRPKLMSFHNCHRI-TVKDIKLIQSPSWTINPILCSNATFDNLTIL 171
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG+DP+ C+I+ G+ +A+K+G + IA ++
Sbjct: 172 NPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-------TYERIACENITI 224
Query: 111 TTPTC----SGVGIGREMSGRIFNVTVNH 135
T T GV +G EMSG I N+T+++
Sbjct: 225 TNCTMVHGHGGVVLGSEMSGSIRNITISN 253
>gi|227550311|ref|ZP_03980360.1| pectin lyase [Enterococcus faecium TX1330]
gi|257897632|ref|ZP_05677285.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium Com12]
gi|293379031|ref|ZP_06625184.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|424764556|ref|ZP_18191976.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|431758788|ref|ZP_19547411.1| polygalacturonase [Enterococcus faecium E3083]
gi|227180571|gb|EEI61543.1| pectin lyase [Enterococcus faecium TX1330]
gi|257834197|gb|EEV60618.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium Com12]
gi|292642310|gb|EFF60467.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|402419039|gb|EJV51323.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|430616603|gb|ELB53499.1| polygalacturonase [Enterococcus faecium E3083]
Length = 445
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 27/149 (18%)
Query: 6 WWNS------TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
WW++ L + R L+ N I + ++ SPS TI+P+ C N +T+L
Sbjct: 113 WWHTFRNEPDNLAYPRPKLMSFHNCHRI-TVKDIKLIQSPSWTINPILCSNATFDNLTIL 171
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG+DP+ C+I+ G+ +A+K+G + IA ++
Sbjct: 172 NPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-------TYERIACENITI 224
Query: 111 TTPTC----SGVGIGREMSGRIFNVTVNH 135
T T GV +G EMSG I N+T+++
Sbjct: 225 TNCTMVHGHGGVVLGSEMSGSIRNITISN 253
>gi|261207232|ref|ZP_05921921.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium TC 6]
gi|289567172|ref|ZP_06447562.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium D344SRF]
gi|294614352|ref|ZP_06694269.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1636]
gi|430850281|ref|ZP_19468044.1| polygalacturonase [Enterococcus faecium E1185]
gi|260078860|gb|EEW66562.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium TC 6]
gi|289161031|gb|EFD08941.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium D344SRF]
gi|291592824|gb|EFF24416.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1636]
gi|430535906|gb|ELA76297.1| polygalacturonase [Enterococcus faecium E1185]
Length = 445
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 27/149 (18%)
Query: 6 WWNS------TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
WW++ L + R L+ N I + ++ SPS TI+P+ C N +T+L
Sbjct: 113 WWHTFRNEPDNLAYPRPKLMSFHNCHRI-TVKDIKLIQSPSWTINPILCSNATFDNLTIL 171
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG+DP+ C+I+ G+ +A+K+G + IA ++
Sbjct: 172 NPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-------TYERIACENITI 224
Query: 111 TTPTC----SGVGIGREMSGRIFNVTVNH 135
T T GV +G EMSG I N+T+++
Sbjct: 225 TNCTMVHGHGGVVLGSEMSGSIRNITISN 253
>gi|336431286|ref|ZP_08611139.1| hypothetical protein HMPREF0991_00258 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336019012|gb|EGN48745.1| hypothetical protein HMPREF0991_00258 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 519
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 69/145 (47%), Gaps = 14/145 (9%)
Query: 3 WDLWWNSTLKHTRGHL---VELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
W+ WW K RG + +N + I+ +T NSPS IHP +C + G+TVL
Sbjct: 205 WENWWLDA-KEVRGAARPRMIFLNRCEDVTITGITVQNSPSWNIHPYFCSHLKFIGVTVL 263
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
P +PNTDGL+P+ C G+ +AVK+G G PSSNI +R+
Sbjct: 264 GPKVSPNTDGLNPESCDDVEITGCLFSVGDDCIAVKAGKISVGAKYKVPSSNIRIRQCCM 323
Query: 111 TTPTCSGVGIGREMSGRIFNVTVNH 135
S + +G EM+ I N+
Sbjct: 324 RDGHGS-ITLGSEMAAGIKNLQARQ 347
>gi|69244135|ref|ZP_00602671.1| Galacturan 1,4-alpha-galacturonidase [Enterococcus faecium DO]
gi|257880495|ref|ZP_05660148.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,230,933]
gi|257886384|ref|ZP_05666037.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,501]
gi|257891474|ref|ZP_05671127.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,410]
gi|257894583|ref|ZP_05674236.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,408]
gi|260562495|ref|ZP_05833005.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium C68]
gi|293559894|ref|ZP_06676406.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1162]
gi|293568212|ref|ZP_06679546.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1071]
gi|314938527|ref|ZP_07845812.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|314942455|ref|ZP_07849295.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|314949488|ref|ZP_07852823.1| polygalacturonase [Enterococcus faecium TX0082]
gi|314952932|ref|ZP_07855899.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|314992201|ref|ZP_07857644.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|314995242|ref|ZP_07860354.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|383329854|ref|YP_005355738.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|389869663|ref|YP_006377086.1| pectin lyase [Enterococcus faecium DO]
gi|406581497|ref|ZP_11056639.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|406583788|ref|ZP_11058833.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|406586132|ref|ZP_11061069.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|406591696|ref|ZP_11065942.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410936309|ref|ZP_11368176.1| pectin lyase [Enterococcus sp. GMD5E]
gi|415891706|ref|ZP_11549795.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4453]
gi|416141642|ref|ZP_11599435.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4452]
gi|424845976|ref|ZP_18270576.1| polygalacturonase [Enterococcus faecium R501]
gi|424854976|ref|ZP_18279307.1| polygalacturonase [Enterococcus faecium R499]
gi|424960548|ref|ZP_18375053.1| polygalacturonase [Enterococcus faecium P1986]
gi|424964739|ref|ZP_18378806.1| polygalacturonase [Enterococcus faecium P1190]
gi|424971119|ref|ZP_18384580.1| polygalacturonase [Enterococcus faecium P1139]
gi|424974622|ref|ZP_18387847.1| polygalacturonase [Enterococcus faecium P1137]
gi|424978117|ref|ZP_18391065.1| polygalacturonase [Enterococcus faecium P1123]
gi|424981120|ref|ZP_18393872.1| polygalacturonase [Enterococcus faecium ERV99]
gi|424983707|ref|ZP_18396282.1| polygalacturonase [Enterococcus faecium ERV69]
gi|424987493|ref|ZP_18399867.1| polygalacturonase [Enterococcus faecium ERV38]
gi|424990935|ref|ZP_18403122.1| polygalacturonase [Enterococcus faecium ERV26]
gi|425007173|ref|ZP_18418318.1| polygalacturonase [Enterococcus faecium ERV1]
gi|425014684|ref|ZP_18425349.1| polygalacturonase [Enterococcus faecium E417]
gi|425021605|ref|ZP_18431844.1| polygalacturonase [Enterococcus faecium C497]
gi|425023089|ref|ZP_18433228.1| polygalacturonase [Enterococcus faecium C1904]
gi|425034680|ref|ZP_18439557.1| polygalacturonase [Enterococcus faecium 514]
gi|425042053|ref|ZP_18446419.1| polygalacturonase [Enterococcus faecium 511]
gi|425046647|ref|ZP_18450644.1| polygalacturonase [Enterococcus faecium 510]
gi|425047911|ref|ZP_18451842.1| polygalacturonase [Enterococcus faecium 509]
gi|425051834|ref|ZP_18455475.1| polygalacturonase [Enterococcus faecium 506]
gi|427397520|ref|ZP_18890002.1| hypothetical protein HMPREF9307_02178 [Enterococcus durans
FB129-CNAB-4]
gi|430824500|ref|ZP_19443057.1| polygalacturonase [Enterococcus faecium E0120]
gi|430832640|ref|ZP_19450680.1| polygalacturonase [Enterococcus faecium E0333]
gi|430845579|ref|ZP_19463463.1| polygalacturonase [Enterococcus faecium E1050]
gi|430848400|ref|ZP_19466219.1| polygalacturonase [Enterococcus faecium E1133]
gi|430856194|ref|ZP_19473897.1| polygalacturonase [Enterococcus faecium E1392]
gi|430868562|ref|ZP_19482856.1| polygalacturonase [Enterococcus faecium E1574]
gi|430968703|ref|ZP_19487864.1| polygalacturonase [Enterococcus faecium E1576]
gi|431017544|ref|ZP_19490421.1| polygalacturonase [Enterococcus faecium E1578]
gi|431243672|ref|ZP_19503845.1| polygalacturonase [Enterococcus faecium E1622]
gi|431261230|ref|ZP_19505727.1| polygalacturonase [Enterococcus faecium E1623]
gi|431323325|ref|ZP_19509129.1| polygalacturonase [Enterococcus faecium E1626]
gi|431388088|ref|ZP_19511694.1| polygalacturonase [Enterococcus faecium E1627]
gi|431520927|ref|ZP_19516641.1| polygalacturonase [Enterococcus faecium E1634]
gi|431565473|ref|ZP_19519835.1| polygalacturonase [Enterococcus faecium E1731]
gi|431744393|ref|ZP_19533261.1| polygalacturonase [Enterococcus faecium E2071]
gi|431747806|ref|ZP_19536575.1| polygalacturonase [Enterococcus faecium E2134]
gi|431750363|ref|ZP_19539082.1| polygalacturonase [Enterococcus faecium E2297]
gi|431755429|ref|ZP_19544078.1| polygalacturonase [Enterococcus faecium E2883]
gi|431769096|ref|ZP_19557524.1| polygalacturonase [Enterococcus faecium E1321]
gi|431771659|ref|ZP_19560039.1| polygalacturonase [Enterococcus faecium E1644]
gi|431774529|ref|ZP_19562836.1| polygalacturonase [Enterococcus faecium E2369]
gi|431780636|ref|ZP_19568809.1| polygalacturonase [Enterococcus faecium E4389]
gi|447913741|ref|YP_007395153.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
gi|68196592|gb|EAN11018.1| Galacturan 1,4-alpha-galacturonidase [Enterococcus faecium DO]
gi|257814723|gb|EEV43481.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,230,933]
gi|257822240|gb|EEV49370.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,501]
gi|257827834|gb|EEV54460.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,410]
gi|257830962|gb|EEV57569.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,408]
gi|260073180|gb|EEW61525.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium C68]
gi|291589112|gb|EFF20926.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1071]
gi|291606166|gb|EFF35588.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1162]
gi|313590498|gb|EFR69343.1| polygalacturonase [Enterococcus faecium TX0133a01]
gi|313593259|gb|EFR72104.1| polygalacturonase [Enterococcus faecium TX0133B]
gi|313595004|gb|EFR73849.1| polygalacturonase [Enterococcus faecium TX0133A]
gi|313598763|gb|EFR77608.1| polygalacturonase [Enterococcus faecium TX0133C]
gi|313642155|gb|EFS06735.1| polygalacturonase [Enterococcus faecium TX0133a04]
gi|313644102|gb|EFS08682.1| polygalacturonase [Enterococcus faecium TX0082]
gi|364090036|gb|EHM32668.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4452]
gi|364093766|gb|EHM36003.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E4453]
gi|378939548|gb|AFC64620.1| polygalacturonase [Enterococcus faecium Aus0004]
gi|388534912|gb|AFK60104.1| pectin lyase [Enterococcus faecium DO]
gi|402919804|gb|EJX40370.1| polygalacturonase [Enterococcus faecium R501]
gi|402931909|gb|EJX51460.1| polygalacturonase [Enterococcus faecium R499]
gi|402945957|gb|EJX64277.1| polygalacturonase [Enterococcus faecium P1190]
gi|402947330|gb|EJX65549.1| polygalacturonase [Enterococcus faecium P1986]
gi|402955965|gb|EJX73454.1| polygalacturonase [Enterococcus faecium P1137]
gi|402959987|gb|EJX77180.1| polygalacturonase [Enterococcus faecium P1139]
gi|402963038|gb|EJX79936.1| polygalacturonase [Enterococcus faecium P1123]
gi|402964595|gb|EJX81367.1| polygalacturonase [Enterococcus faecium ERV99]
gi|402970840|gb|EJX87153.1| polygalacturonase [Enterococcus faecium ERV69]
gi|402974315|gb|EJX90374.1| polygalacturonase [Enterococcus faecium ERV38]
gi|402978299|gb|EJX94052.1| polygalacturonase [Enterococcus faecium ERV26]
gi|402995607|gb|EJY10050.1| polygalacturonase [Enterococcus faecium ERV1]
gi|402997994|gb|EJY12279.1| polygalacturonase [Enterococcus faecium E417]
gi|403006146|gb|EJY19813.1| polygalacturonase [Enterococcus faecium C497]
gi|403010843|gb|EJY24188.1| polygalacturonase [Enterococcus faecium C1904]
gi|403019826|gb|EJY32405.1| polygalacturonase [Enterococcus faecium 514]
gi|403023540|gb|EJY35785.1| polygalacturonase [Enterococcus faecium 510]
gi|403024463|gb|EJY36619.1| polygalacturonase [Enterococcus faecium 511]
gi|403032239|gb|EJY43807.1| polygalacturonase [Enterococcus faecium 509]
gi|403036560|gb|EJY47906.1| polygalacturonase [Enterococcus faecium 506]
gi|404452556|gb|EJZ99740.1| polygalacturonase [Enterococcus sp. GMD4E]
gi|404456111|gb|EKA02868.1| polygalacturonase [Enterococcus sp. GMD3E]
gi|404461640|gb|EKA07534.1| polygalacturonase [Enterococcus sp. GMD2E]
gi|404467219|gb|EKA12401.1| polygalacturonase [Enterococcus sp. GMD1E]
gi|410735255|gb|EKQ77169.1| pectin lyase [Enterococcus sp. GMD5E]
gi|425722196|gb|EKU85093.1| hypothetical protein HMPREF9307_02178 [Enterococcus durans
FB129-CNAB-4]
gi|430441028|gb|ELA51171.1| polygalacturonase [Enterococcus faecium E0120]
gi|430479695|gb|ELA56911.1| polygalacturonase [Enterococcus faecium E0333]
gi|430495386|gb|ELA71561.1| polygalacturonase [Enterococcus faecium E1050]
gi|430534971|gb|ELA75396.1| polygalacturonase [Enterococcus faecium E1133]
gi|430545280|gb|ELA85263.1| polygalacturonase [Enterococcus faecium E1392]
gi|430548826|gb|ELA88674.1| polygalacturonase [Enterococcus faecium E1574]
gi|430554873|gb|ELA94441.1| polygalacturonase [Enterococcus faecium E1576]
gi|430559243|gb|ELA98603.1| polygalacturonase [Enterococcus faecium E1578]
gi|430571641|gb|ELB10527.1| polygalacturonase [Enterococcus faecium E1622]
gi|430576635|gb|ELB15272.1| polygalacturonase [Enterococcus faecium E1623]
gi|430577973|gb|ELB16549.1| polygalacturonase [Enterococcus faecium E1626]
gi|430580353|gb|ELB18826.1| polygalacturonase [Enterococcus faecium E1627]
gi|430585070|gb|ELB23371.1| polygalacturonase [Enterococcus faecium E1634]
gi|430589382|gb|ELB27511.1| polygalacturonase [Enterococcus faecium E1731]
gi|430604693|gb|ELB42128.1| polygalacturonase [Enterococcus faecium E2134]
gi|430605136|gb|ELB42541.1| polygalacturonase [Enterococcus faecium E2071]
gi|430609790|gb|ELB46967.1| polygalacturonase [Enterococcus faecium E2297]
gi|430616651|gb|ELB53546.1| polygalacturonase [Enterococcus faecium E2883]
gi|430628012|gb|ELB64470.1| polygalacturonase [Enterococcus faecium E1321]
gi|430632933|gb|ELB69123.1| polygalacturonase [Enterococcus faecium E1644]
gi|430633934|gb|ELB70079.1| polygalacturonase [Enterococcus faecium E2369]
gi|430639091|gb|ELB74973.1| polygalacturonase [Enterococcus faecium E4389]
gi|445189450|gb|AGE31092.1| Polygalacturonase [Enterococcus faecium NRRL B-2354]
Length = 445
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 27/149 (18%)
Query: 6 WWNS------TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
WW++ L + R L+ N I + ++ SPS TI+P+ C N +T+L
Sbjct: 113 WWHTFRNEPDNLAYPRPKLMSFHNCHRI-TVKDIKLIQSPSWTINPILCSNATFDNLTIL 171
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG+DP+ C+I+ G+ +A+K+G + IA ++
Sbjct: 172 NPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-------TYERIACENITI 224
Query: 111 TTPTC----SGVGIGREMSGRIFNVTVNH 135
T T GV +G EMSG I N+T+++
Sbjct: 225 TNCTMVHGHGGVVLGSEMSGSIRNITISN 253
>gi|257883307|ref|ZP_05662960.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,502]
gi|294622157|ref|ZP_06701229.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium U0317]
gi|424791201|ref|ZP_18217679.1| polygalacturonase [Enterococcus faecium V689]
gi|424796708|ref|ZP_18222399.1| polygalacturonase [Enterococcus faecium S447]
gi|424949492|ref|ZP_18365160.1| polygalacturonase [Enterococcus faecium R496]
gi|424953665|ref|ZP_18368614.1| polygalacturonase [Enterococcus faecium R494]
gi|424956671|ref|ZP_18371436.1| polygalacturonase [Enterococcus faecium R446]
gi|424968083|ref|ZP_18381741.1| polygalacturonase [Enterococcus faecium P1140]
gi|424994459|ref|ZP_18406396.1| polygalacturonase [Enterococcus faecium ERV168]
gi|424998609|ref|ZP_18410283.1| polygalacturonase [Enterococcus faecium ERV165]
gi|425001105|ref|ZP_18412635.1| polygalacturonase [Enterococcus faecium ERV161]
gi|425005198|ref|ZP_18416463.1| polygalacturonase [Enterococcus faecium ERV102]
gi|425011663|ref|ZP_18422546.1| polygalacturonase [Enterococcus faecium E422]
gi|425017819|ref|ZP_18428304.1| polygalacturonase [Enterococcus faecium C621]
gi|425032259|ref|ZP_18437327.1| polygalacturonase [Enterococcus faecium 515]
gi|425039369|ref|ZP_18443912.1| polygalacturonase [Enterococcus faecium 513]
gi|431777897|ref|ZP_19566138.1| polygalacturonase [Enterococcus faecium E2560]
gi|431783614|ref|ZP_19571712.1| polygalacturonase [Enterococcus faecium E6012]
gi|431786798|ref|ZP_19574796.1| polygalacturonase [Enterococcus faecium E6045]
gi|257818965|gb|EEV46293.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium
1,231,502]
gi|291598326|gb|EFF29415.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium U0317]
gi|402919867|gb|EJX40428.1| polygalacturonase [Enterococcus faecium V689]
gi|402922635|gb|EJX42996.1| polygalacturonase [Enterococcus faecium S447]
gi|402934197|gb|EJX53567.1| polygalacturonase [Enterococcus faecium R496]
gi|402938569|gb|EJX57565.1| polygalacturonase [Enterococcus faecium R494]
gi|402945367|gb|EJX63722.1| polygalacturonase [Enterococcus faecium R446]
gi|402952945|gb|EJX70709.1| polygalacturonase [Enterococcus faecium P1140]
gi|402980034|gb|EJX95667.1| polygalacturonase [Enterococcus faecium ERV168]
gi|402982456|gb|EJX97919.1| polygalacturonase [Enterococcus faecium ERV165]
gi|402987170|gb|EJY02259.1| polygalacturonase [Enterococcus faecium ERV102]
gi|402987432|gb|EJY02495.1| polygalacturonase [Enterococcus faecium ERV161]
gi|402995999|gb|EJY10409.1| polygalacturonase [Enterococcus faecium E422]
gi|403003645|gb|EJY17529.1| polygalacturonase [Enterococcus faecium C621]
gi|403013568|gb|EJY26654.1| polygalacturonase [Enterococcus faecium 515]
gi|403016115|gb|EJY28950.1| polygalacturonase [Enterococcus faecium 513]
gi|430638501|gb|ELB74432.1| polygalacturonase [Enterococcus faecium E2560]
gi|430644798|gb|ELB80379.1| polygalacturonase [Enterococcus faecium E6012]
gi|430644949|gb|ELB80513.1| polygalacturonase [Enterococcus faecium E6045]
Length = 445
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 27/149 (18%)
Query: 6 WWNS------TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
WW++ L + R L+ N I + ++ SPS TI+P+ C N +T+L
Sbjct: 113 WWHTFRNEPDNLAYPRPKLMSFHNCHRI-TVKDIKLIQSPSWTINPILCSNATFDNLTIL 171
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG+DP+ C+I+ G+ +A+K+G + IA ++
Sbjct: 172 NPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-------TYERIACENITI 224
Query: 111 TTPTC----SGVGIGREMSGRIFNVTVNH 135
T T GV +G EMSG I N+T+++
Sbjct: 225 TNCTMVHGHGGVVLGSEMSGSIRNITISN 253
>gi|430834097|ref|ZP_19452106.1| polygalacturonase [Enterococcus faecium E0679]
gi|430485620|gb|ELA62520.1| polygalacturonase [Enterococcus faecium E0679]
Length = 452
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 27/149 (18%)
Query: 6 WWNS------TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
WW++ L + R L+ N I + ++ SPS TI+P+ C N +T+L
Sbjct: 113 WWHTFRNEPDNLAYPRPKLMSFHNCHRI-TVKDIKLIQSPSWTINPILCSNATFDNLTIL 171
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG+DP+ C+I+ G+ +A+K+G + IA ++
Sbjct: 172 NPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-------TYERIACENITI 224
Query: 111 TTPTC----SGVGIGREMSGRIFNVTVNH 135
T T GV +G EMSG I N+T+++
Sbjct: 225 TNCTMVHGHGGVVLGSEMSGSIRNITISN 253
>gi|425055000|ref|ZP_18458495.1| polygalacturonase [Enterococcus faecium 505]
gi|403034850|gb|EJY46272.1| polygalacturonase [Enterococcus faecium 505]
Length = 445
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 27/149 (18%)
Query: 6 WWNS------TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
WW++ L + R L+ N I + ++ SPS TI+P+ C N +T+L
Sbjct: 113 WWHTFRNEPDNLAYPRPKLMSFHNCHRI-TVKDIKLIQSPSWTINPILCSNATFDNLTIL 171
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG+DP+ C+I+ G+ +A+K+G + IA ++
Sbjct: 172 NPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-------TYERIACENITI 224
Query: 111 TTPTC----SGVGIGREMSGRIFNVTVNH 135
T T GV +G EMSG I N+T+++
Sbjct: 225 TNCTMVHGHGGVVLGSEMSGSIRNITISN 253
>gi|431472772|ref|ZP_19514500.1| polygalacturonase [Enterococcus faecium E1630]
gi|431761402|ref|ZP_19549976.1| polygalacturonase [Enterococcus faecium E3346]
gi|430583557|gb|ELB21919.1| polygalacturonase [Enterococcus faecium E1630]
gi|430621543|gb|ELB58304.1| polygalacturonase [Enterococcus faecium E3346]
Length = 445
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 27/149 (18%)
Query: 6 WWNS------TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
WW++ L + R L+ N I + ++ SPS TI+P+ C N +T+L
Sbjct: 113 WWHTFRNEPDNLAYPRPKLMSFHNCHRI-TVKDIKLIQSPSWTINPILCSNATFDNLTIL 171
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG+DP+ C+I+ G+ +A+K+G + IA ++
Sbjct: 172 NPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-------TYERIACENITI 224
Query: 111 TTPTC----SGVGIGREMSGRIFNVTVNH 135
T T GV +G EMSG I N+T+++
Sbjct: 225 TNCTMVHGHGGVVLGSEMSGSIRNITISN 253
>gi|337752008|ref|YP_004646170.1| hypothetical protein KNP414_07814 [Paenibacillus mucilaginosus
KNP414]
gi|336303197|gb|AEI46300.1| hypothetical protein KNP414_07814 [Paenibacillus mucilaginosus
KNP414]
Length = 506
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 11/130 (8%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD--- 71
R L++LM+ + ++ +T NSP H VYC + ++G+ +P + PN DGLD
Sbjct: 163 RPPLLQLMHCEEV-VLEGITLQNSPFWNTHLVYCDDVSLRGVKFKNPSTTPNGDGLDVDS 221
Query: 72 ------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
DC+ + G+ + +KSG D DG + RP+ N+AV + GV +G E +
Sbjct: 222 CSNVRISDCHFDVGDDCLCLKSGIDADGRRVGRPTENVAVTNCT-MLHGHGGVVLGSETA 280
Query: 126 GRIFNVTVNH 135
G I NVT+++
Sbjct: 281 GGIRNVTISN 290
>gi|430821816|ref|ZP_19440403.1| polygalacturonase [Enterococcus faecium E0045]
gi|430830077|ref|ZP_19448143.1| polygalacturonase [Enterococcus faecium E0269]
gi|430921162|ref|ZP_19485329.1| polygalacturonase [Enterococcus faecium E1575]
gi|431703882|ref|ZP_19525108.1| polygalacturonase [Enterococcus faecium E1904]
gi|431766532|ref|ZP_19555009.1| polygalacturonase [Enterococcus faecium E4215]
gi|430438088|gb|ELA48576.1| polygalacturonase [Enterococcus faecium E0045]
gi|430479132|gb|ELA56406.1| polygalacturonase [Enterococcus faecium E0269]
gi|430554055|gb|ELA93727.1| polygalacturonase [Enterococcus faecium E1575]
gi|430596728|gb|ELB34544.1| polygalacturonase [Enterococcus faecium E1904]
gi|430626092|gb|ELB62680.1| polygalacturonase [Enterococcus faecium E4215]
Length = 445
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 27/149 (18%)
Query: 6 WWNS------TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
WW++ L + R L+ N I + ++ SPS TI+P+ C N +T+L
Sbjct: 113 WWHTFRNEPDNLAYPRPKLMSFHNCHRI-TVKDIKLIQSPSWTINPILCSNATFDNLTIL 171
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG+DP+ C+I+ G+ +A+K+G + IA ++
Sbjct: 172 NPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-------TYERIACENITI 224
Query: 111 TTPTC----SGVGIGREMSGRIFNVTVNH 135
T T GV +G EMSG I N+T+++
Sbjct: 225 TNCTMVHGHGGVVLGSEMSGSIRNITISN 253
>gi|339499261|ref|YP_004697296.1| polygalacturonase [Spirochaeta caldaria DSM 7334]
gi|338833610|gb|AEJ18788.1| Polygalacturonase [Spirochaeta caldaria DSM 7334]
Length = 467
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 11/143 (7%)
Query: 11 LKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGL 70
L+ R L++ +N NI + N+T NSP H +C + + G+ ++P APNTDGL
Sbjct: 160 LQFLRPPLIQFLNCKNI-TLQNVTLQNSPFWNTHFAFCSDCTITGVHFINPKEAPNTDGL 218
Query: 71 DPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIG 121
+ D C + G+ + +KSG DGI + RP+ NI + + GV IG
Sbjct: 219 NIDSCSSITIQNCTFDVGDDCLGLKSGSGEDGIRINRPTENILIDSCTMKNGH-GGVVIG 277
Query: 122 REMSGRIFNVTVNHLDVWMQQQG 144
E +G I N+ + + + +G
Sbjct: 278 SETAGGINNIKITNCSMEETDRG 300
>gi|189464497|ref|ZP_03013282.1| hypothetical protein BACINT_00839 [Bacteroides intestinalis DSM
17393]
gi|189438287|gb|EDV07272.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 492
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 70/136 (51%), Gaps = 20/136 (14%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS---APNTDGLD 71
R ++ +NILI N+ NSP TI+P +C N + G+T+ +P S PNTDG++
Sbjct: 187 RPPFIQFYECTNILI-ENVKIINSPFWTINPAFCDNVTIHGVTINNPSSNPKGPNTDGIN 245
Query: 72 P---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVG 119
P DC+I G+ + +KSG D DG + NI + +SG GV
Sbjct: 246 PSSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCIMLSGH----GGVV 301
Query: 120 IGREMSGRIFNVTVNH 135
IG EMSG + V +++
Sbjct: 302 IGSEMSGGVKRVAISN 317
>gi|424907689|ref|ZP_18331159.1| polygalacturonase [Enterococcus faecium R497]
gi|425060672|ref|ZP_18463956.1| polygalacturonase [Enterococcus faecium 503]
gi|402930043|gb|EJX49746.1| polygalacturonase [Enterococcus faecium R497]
gi|403042383|gb|EJY53341.1| polygalacturonase [Enterococcus faecium 503]
Length = 445
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 27/149 (18%)
Query: 6 WWNS------TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
WW++ L + R L+ N I + ++ SPS TI+P+ C N +T+L
Sbjct: 113 WWHTFRNEPDNLAYPRPKLMSFHNCHRI-TVKDIKLIQSPSWTINPILCSNATFDNLTIL 171
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG+DP+ C+I+ G+ +A+K+G + IA ++
Sbjct: 172 NPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-------TYERIACENITI 224
Query: 111 TTPTC----SGVGIGREMSGRIFNVTVNH 135
T T GV +G EMSG I N+T+++
Sbjct: 225 TNCTMVHGHGGVVLGSEMSGSIRNITISN 253
>gi|430854295|ref|ZP_19472011.1| polygalacturonase [Enterococcus faecium E1258]
gi|430539024|gb|ELA79287.1| polygalacturonase [Enterococcus faecium E1258]
Length = 445
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 27/149 (18%)
Query: 6 WWNS------TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
WW++ L + R L+ N I + ++ SPS TI+P+ C N +T+L
Sbjct: 113 WWHTFRNESDNLAYPRPKLMSFHNCHRI-TVKDIKLIQSPSWTINPILCSNATFDNLTIL 171
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG+DP+ C+I+ G+ +A+K+G + IA ++
Sbjct: 172 NPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-------TYERIACENITI 224
Query: 111 TTPTC----SGVGIGREMSGRIFNVTVNH 135
T T GV +G EMSG I N+T+++
Sbjct: 225 TNCTMVHGHGGVVLGSEMSGSIRNITISN 253
>gi|355673331|ref|ZP_09058928.1| hypothetical protein HMPREF9469_01965 [Clostridium citroniae
WAL-17108]
gi|354814797|gb|EHE99396.1| hypothetical protein HMPREF9469_01965 [Clostridium citroniae
WAL-17108]
Length = 532
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 70/141 (49%), Gaps = 16/141 (11%)
Query: 6 WWNSTLKHT---RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WW+ + R +V L ++ +I LT NSPS IHP + + + VLSP
Sbjct: 222 WWHDPKRMKTAFRPRMVFLERCKHV-VIQGLTLRNSPSWNIHPYFSEHLKFLDLRVLSPK 280
Query: 63 SAPNTDGLDPD----------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
+PNTDGLDP+ C+ G+ +AVKSG + G RPS +I V R
Sbjct: 281 DSPNTDGLDPESCRDVEITGICF-SVGDDCIAVKSGKIYMGTTYKRPSEDIVVSRCCMRD 339
Query: 113 PTCSGVGIGREMSGRIFNVTV 133
S V IG EM+G + N+TV
Sbjct: 340 GHGS-VTIGSEMAGGVKNLTV 359
>gi|393201099|ref|YP_006462941.1| endopolygalacturonase [Solibacillus silvestris StLB046]
gi|327440430|dbj|BAK16795.1| endopolygalacturonase [Solibacillus silvestris StLB046]
Length = 449
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 75/142 (52%), Gaps = 13/142 (9%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W L+ +L + R +LV + + I + +SPS T+HP C N + G+++++P
Sbjct: 123 WKLFKEDSLAYPRPNLVSFDHCERVHI-EQVKMIDSPSWTVHPNDCDNVTISGVSIVNPA 181
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
++PNTDG++P DC I+ G+ +A+K+G + A+ P NI + +
Sbjct: 182 NSPNTDGINPESCRNVKISDCSIDVGDDCIAIKAGTEDAERAI--PCENITITNCT-MLH 238
Query: 114 TCSGVGIGREMSGRIFNVTVNH 135
GV G EMSG I NV V++
Sbjct: 239 GHGGVVFGSEMSGDIRNVVVSN 260
>gi|224536535|ref|ZP_03677074.1| hypothetical protein BACCELL_01410 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521791|gb|EEF90896.1| hypothetical protein BACCELL_01410 [Bacteroides cellulosilyticus
DSM 14838]
Length = 491
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 20/139 (14%)
Query: 12 KHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS---APNTD 68
K R ++ +NILI N+ NSP T++P +C N + G+T+ +P S PNTD
Sbjct: 184 KMFRPPFIQFYECTNILI-ENVKIINSPFWTVNPAFCDNVTIHGVTINNPSSNPKGPNTD 242
Query: 69 GLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCS 116
G++P DC+I G+ + +KSG D DG + NI + +SG
Sbjct: 243 GINPSSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCIMLSGH----G 298
Query: 117 GVGIGREMSGRIFNVTVNH 135
GV IG EMSG + + +++
Sbjct: 299 GVVIGSEMSGGVKRIAISN 317
>gi|423223595|ref|ZP_17210064.1| hypothetical protein HMPREF1062_02250 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638220|gb|EIY32067.1| hypothetical protein HMPREF1062_02250 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 491
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 20/139 (14%)
Query: 12 KHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS---APNTD 68
K R ++ +NILI N+ NSP T++P +C N + G+T+ +P S PNTD
Sbjct: 184 KMFRPPFIQFYECTNILI-ENVKIINSPFWTVNPAFCDNVTIHGVTINNPSSNPKGPNTD 242
Query: 69 GLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCS 116
G++P DC+I G+ + +KSG D DG + NI + +SG
Sbjct: 243 GINPSSCRNVRISDCFISVGDDCITIKSGRDADGRKYGKACENITITNCIMLSGH----G 298
Query: 117 GVGIGREMSGRIFNVTVNH 135
GV IG EMSG + + +++
Sbjct: 299 GVVIGSEMSGGVKRIAISN 317
>gi|379727941|ref|YP_005320126.1| polygalacturonase [Melissococcus plutonius DAT561]
gi|376318844|dbj|BAL62631.1| polygalacturonase [Melissococcus plutonius DAT561]
Length = 442
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 18/145 (12%)
Query: 6 WWN------STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
WW L + R +L+ SS I IS+L SPS T+HP+ C + ++ +++L
Sbjct: 119 WWKLHRETPEKLAYPRPYLIGFDYSSRI-TISDLNLTMSPSWTVHPMECYDVTIQNISIL 177
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG+DP+ C I+ G+ +A+KSG + + + NI + +
Sbjct: 178 NPADSPNTDGIDPESCKNLRILNCNIDVGDDCIAIKSGTEQTTTSKSA-CENITISNCT- 235
Query: 111 TTPTCSGVGIGREMSGRIFNVTVNH 135
V +G EMSG I NVT+++
Sbjct: 236 MVHGHGAVVLGSEMSGNIRNVTISN 260
>gi|388259231|ref|ZP_10136405.1| exo-poly-alpha-D-galacturonosidase [Cellvibrio sp. BR]
gi|387937189|gb|EIK43746.1| exo-poly-alpha-D-galacturonosidase [Cellvibrio sp. BR]
Length = 461
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 67/126 (53%), Gaps = 14/126 (11%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC 74
R L++++N+ +L+ + T NSP H VY + V+G+ V S + N DGLD D
Sbjct: 210 RPSLIQILNAERVLL-QDYTALNSPFWVNHLVYTDHAQVRGVKVDSMFA--NNDGLDIDS 266
Query: 75 ---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
+ +G+ +A+KSG D DG + RPS NI VR + GVG+G EMS
Sbjct: 267 GRWILVENNHFRTGDDSIAIKSGRDLDGRTIGRPSENIVVR--NNLFDGEDGVGLGSEMS 324
Query: 126 GRIFNV 131
G I NV
Sbjct: 325 GGIKNV 330
>gi|376338084|gb|AFB33587.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 64/141 (45%), Gaps = 34/141 (24%)
Query: 87 SGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSY 146
SGWD GI RPSSNI +RRV G T T SG+ +G EMSG I V L ++ ++G
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGL- 59
Query: 147 KDRLR------------------------------LYG-HPKEGWDPKAIPKISGISFVN 175
R++ LYG HP + +DP A+P I I+F +
Sbjct: 60 --RIKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPXIQRITFKD 117
Query: 176 VVSVNTTKAPVLAGIIGTQFE 196
++ A + GI F+
Sbjct: 118 IIGXEIKTAGSVEGIQNAPFK 138
>gi|294617477|ref|ZP_06697109.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1679]
gi|291596284|gb|EFF27545.1| galacturan 1,4-alpha-galacturonidase [Enterococcus faecium E1679]
Length = 363
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 27/149 (18%)
Query: 6 WWNS------TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
WW++ L + R L+ N I + ++ SPS TI+P+ C N +T+L
Sbjct: 113 WWHTFRNEPDNLAYPRPKLMSFHNCHRI-TVKDIKLIQSPSWTINPILCSNATFDNLTIL 171
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG+DP+ C+I+ G+ +A+K+G + IA ++
Sbjct: 172 NPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKAGTED-------TYERIACENITI 224
Query: 111 TTPTC----SGVGIGREMSGRIFNVTVNH 135
T T GV +G EMSG I N+T+++
Sbjct: 225 TNCTMVHGHGGVVLGSEMSGSIRNITISN 253
>gi|71535025|gb|AAZ32910.1| polygalacturonase-like protein [Medicago sativa]
Length = 206
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + N LK+TR +L+ELM S NI I SNLT +SPS IHPVY N +KG+T+++P+
Sbjct: 134 WQQFHNKKLKYTRPYLIELMFSDNIQI-SNLTLLDSPSWNIHPVYSSNIIIKGITIIAPI 192
Query: 63 SAPNTDGLDPD 73
+PNTDG++PD
Sbjct: 193 RSPNTDGINPD 203
>gi|167521696|ref|XP_001745186.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776144|gb|EDQ89764.1| predicted protein [Monosiga brevicollis MX1]
Length = 945
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 70/141 (49%), Gaps = 34/141 (24%)
Query: 28 LIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYIES 78
L +S+LT + T+ P +C+N + + +++ S PNTDG+DPD CYI +
Sbjct: 685 LYLSDLTLTDPAFWTVAPAFCKNVHIHDLRIIT--SGPNTDGVDPDSCQNVLVERCYIST 742
Query: 79 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVS------------GTTPTCS---------- 116
G+ +A+KSG +A+ P++N+ +R V G+ C
Sbjct: 743 GDDCIAIKSGRGPQALAINMPTANVTIRHVPQRVGRDYDATAIGSYALCRGQIRTDCTTG 802
Query: 117 -GVGIGREMSGRIFNVTVNHL 136
G+ IG EMSG I++V ++L
Sbjct: 803 HGISIGSEMSGGIYDVLFDNL 823
>gi|383752964|ref|YP_005431867.1| putative polygalacturonase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365016|dbj|BAL81844.1| putative polygalacturonase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 494
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 15/131 (11%)
Query: 18 LVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP----- 72
++ NS +I I+ + NSP I+PV C N ++KG+ + + L N DG+DP
Sbjct: 229 FIQFYNSKDIRIMG-VHIVNSPFWEINPVLCENVWIKGVHIETDLY--NNDGIDPESSRN 285
Query: 73 ----DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 128
DCY +G+ +A+KSG + DG + P++N+ +R + G+ +G E+SG +
Sbjct: 286 VLIEDCYFLTGDDCIAIKSGRNEDGRRIGVPTANVIIRH-NRFANGHGGITLGSEISGGV 344
Query: 129 FNV--TVNHLD 137
+V T NH D
Sbjct: 345 HDVFATGNHFD 355
>gi|375100882|ref|ZP_09747145.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661614|gb|EHR61492.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 485
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 69/129 (53%), Gaps = 18/129 (13%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R + V+ SS+IL+ S +T NSP IHPV N V G+T+ SP PN+DG++P+
Sbjct: 223 RPNFVQFYRSSDILV-SGVTLTNSPMWMIHPVLSENVIVDGVTLDSP-DGPNSDGVNPES 280
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAV---RRVSGTTPTCSGVGIGR 122
++G+ +A+KSG + DG + PS NI + R G GV IG
Sbjct: 281 SRNVVIRNSSFDNGDDCIAIKSGRNADGRRIGVPSENIVIHDNRMFDG----HGGVVIGS 336
Query: 123 EMSGRIFNV 131
EMSG + NV
Sbjct: 337 EMSGDVRNV 345
>gi|336251837|ref|YP_004585805.1| Polygalacturonase [Halopiger xanaduensis SH-6]
gi|335339761|gb|AEH38999.1| Polygalacturonase [Halopiger xanaduensis SH-6]
Length = 516
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 100/237 (42%), Gaps = 44/237 (18%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS-APNTDGLD-- 71
R L ++ S N+ +S +T NSP H VY N + + VL+P APN DG+D
Sbjct: 159 RPPLFQISESENV-TVSGVTLQNSPFWNTHVVYSENVTISDVNVLNPAEGAPNGDGIDID 217
Query: 72 -------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREM 124
D YI +G+ + +KSG + +G + P+S I V + GV IG EM
Sbjct: 218 SSRYVRISDAYINAGDDAICIKSGKNAEGREVGEPASQITVTNCT-VEAGHGGVVIGSEM 276
Query: 125 SGRIFNVTVNHLDVWMQQQG----SYKDR------LRL-----------------YGHPK 157
SG + +V V + +G + +DR LR Y P
Sbjct: 277 SGDVRDVAVTNCTFTDTDRGVRIKTQRDRGGVVEDLRFDNIVMRRIASPFTINGYYFTPL 336
Query: 158 EGWDPKAI----PKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLVQAP 210
+ +P+ + P + ++F N+ + N A AG+ FE I NV + P
Sbjct: 337 DS-EPEPVDEGTPMVRNVTFSNITARNVETAGFFAGLPEQYFEGIEFDNVRIDATRP 392
>gi|255036065|ref|YP_003086686.1| glycoside hydrolase [Dyadobacter fermentans DSM 18053]
gi|254948821|gb|ACT93521.1| glycoside hydrolase family 28 [Dyadobacter fermentans DSM 18053]
Length = 455
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 13/135 (9%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
H R ++ N+L+ T NSP TIHP C+N + + V + N DG+DP
Sbjct: 206 HLRPQFIQFNRCENVLM-EGFTVTNSPFWTIHPYLCKNVVISRLKVYA--HGHNNDGVDP 262
Query: 73 ---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
DC + G+ +A+KSG + +G + PS NI +R ++ V IG E
Sbjct: 263 EMSQNVFITDCVFDQGDDAIAIKSGRNPEGWRLKTPSKNIVIRNLT-VKNGHQLVAIGSE 321
Query: 124 MSGRIFNVTVNHLDV 138
+SG I NV ++ V
Sbjct: 322 LSGGIENVDISQCQV 336
>gi|261879637|ref|ZP_06006064.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270333653|gb|EFA44439.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 496
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 68/143 (47%), Gaps = 15/143 (10%)
Query: 4 DLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
D WN+ + R +V L+N N+L+ ++ F NSP+ IHP+ C N + G+ +P
Sbjct: 219 DEEWNAIKRFLRPVMVSLVNCKNVLL-KDVIFQNSPAWNIHPLMCENVIIDGVLARNPSY 277
Query: 64 APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
A N D LD + ++G+ + +KSG D G RP N+ V G T
Sbjct: 278 AQNGDALDLESCKNVLVVNSKFDAGDDGICIKSGKDESGRKRGRPCENVV---VDGCTVF 334
Query: 115 C--SGVGIGREMSGRIFNVTVNH 135
G +G EMSG + N+ V
Sbjct: 335 AGHGGFVVGSEMSGGVRNILVKR 357
>gi|361068131|gb|AEW08377.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|376338080|gb|AFB33585.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 64/141 (45%), Gaps = 34/141 (24%)
Query: 87 SGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSY 146
SGWD GI RPSSNI +RRV G T T SG+ +G EMSG I V L ++ ++G
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGL- 59
Query: 147 KDRLR------------------------------LYG-HPKEGWDPKAIPKISGISFVN 175
R++ LYG HP + +DP A+P I I+F +
Sbjct: 60 --RIKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKD 117
Query: 176 VVSVNTTKAPVLAGIIGTQFE 196
++ A + GI F+
Sbjct: 118 IIGDEIKTAGSVEGIQNAPFK 138
>gi|189462646|ref|ZP_03011431.1| hypothetical protein BACCOP_03343 [Bacteroides coprocola DSM 17136]
gi|189430807|gb|EDU99791.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 482
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 26 NILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYI 76
N ++I ++T NSP IHP+ C + V+G+ + + PN DG DP+ C
Sbjct: 238 NTILIEDVTLLNSPFWVIHPLLCESLIVRGVKIYN--RGPNGDGCDPESCKNVLIENCRF 295
Query: 77 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
++G+ +A+KSG + DG RPS NI VR GV IG E+SG N+ V +
Sbjct: 296 DTGDDCIAIKSGRNEDGRKWNRPSENIIVRNCEMKNGH-GGVVIGSEISGGYRNLYVEN 353
>gi|323452523|gb|EGB08397.1| hypothetical protein AURANDRAFT_26417 [Aureococcus anophagefferens]
Length = 460
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 10/111 (9%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYIESGN 80
++N + N+P +HPVY N +V+ + V + PNTDG+DP+ C I +G+
Sbjct: 201 LANFSLVNAPFWAVHPVYSENVWVRNLRVNTSWDRPNTDGVDPEACKDVLVENCVISAGD 260
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 131
VA+K+G D DG + S NI VRR + +G+ +G E+SG + NV
Sbjct: 261 DAVALKTGRDADGWRVGVASENIVVRR-NVLASRFNGICVGSEVSGGVDNV 310
>gi|325106104|ref|YP_004275758.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974952|gb|ADY53936.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 1277
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 15/160 (9%)
Query: 12 KHT-RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGL 70
KH R +E +N NILI + ++ IHP+ C N V+ +++ S N+DG
Sbjct: 197 KHKLRPAFIEPLNCRNILI-EGVRIIDATFWVIHPIGCNNVTVRNVSIDS--FNANSDGF 253
Query: 71 DPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIG 121
DP+ C+ +G+ +A+KSG D DG + +P+ NI VR S SGV IG
Sbjct: 254 DPESTTNALVENCHFRTGDDGIAIKSGRDQDGWRIGQPTENIIVRN-STFESLASGVCIG 312
Query: 122 REMSGRIFNVTVNHLDVWMQQQGSY-KDRLRLYGHPKEGW 160
E+SG + NV + ++ + Y K L G+ + W
Sbjct: 313 SEISGGVRNVFIENIKIPKASNAIYFKSNLDRGGYMENTW 352
>gi|325299708|ref|YP_004259625.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319261|gb|ADY37152.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 468
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 24 SSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------C 74
S N ++I ++T NSP IHP++C + V+G+ + + PN DG DP+ C
Sbjct: 221 SCNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVKIFN--RGPNGDGCDPESCKNVLIENC 278
Query: 75 YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV 133
++G+ +A+KSG + DG PS NI VR GV IG E+SG N+ V
Sbjct: 279 RFDTGDDCIAIKSGRNEDGRKWNIPSENIVVRNCEMKNGH-GGVVIGSEISGGYRNLYV 336
>gi|404484304|ref|ZP_11019517.1| hypothetical protein HMPREF1135_02577 [Clostridiales bacterium
OBRC5-5]
gi|404342621|gb|EJZ68992.1| hypothetical protein HMPREF1135_02577 [Clostridiales bacterium
OBRC5-5]
Length = 526
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 14/140 (10%)
Query: 6 WWNSTLKHT---RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WW K R + V L N NI + L NSPS T+HP Y N T+++P
Sbjct: 210 WWKDAKKKNIAWRPNTVFLHNCKNIAM-QGLCIMNSPSWTVHPYYSDNLLFLNNTIMNPD 268
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
++PNTDGLDP+ I G+ VA+KSG + + +P+ NI +R S
Sbjct: 269 NSPNTDGLDPESCENVLILGADISVGDDCVAIKSGKYYMALKHYKPAKNIVIRN-SIFRK 327
Query: 114 TCSGVGIGREMSGRIFNVTV 133
V IG E++ +++V+V
Sbjct: 328 GHGSVTIGSEVAAGVYDVSV 347
>gi|315650888|ref|ZP_07903931.1| pectin lyase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315486867|gb|EFU77206.1| pectin lyase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 360
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 75/151 (49%), Gaps = 14/151 (9%)
Query: 6 WWNSTLKHT---RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WW K R + V L N NI + L NSPS T+HP Y N T+++P
Sbjct: 210 WWKDAKKKNIAWRPNTVFLHNCKNIAM-QGLCIMNSPSWTLHPYYSDNLLFLNNTIMNPD 268
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
++PNTDGLDP+ I G+ +A+KSG + + +P+ NI +R S
Sbjct: 269 NSPNTDGLDPESCENVLILGADISVGDDCIAIKSGKYYMALRHYKPAKNIVIRN-SIFRK 327
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG 144
V IG E++ +++V+V ++ + + +G
Sbjct: 328 GHGSVTIGSEVAAGVYDVSVENVYLKGRTEG 358
>gi|160936546|ref|ZP_02083913.1| hypothetical protein CLOBOL_01436 [Clostridium bolteae ATCC
BAA-613]
gi|158440337|gb|EDP18082.1| hypothetical protein CLOBOL_01436 [Clostridium bolteae ATCC
BAA-613]
Length = 522
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 6 WWNS-TLKHT--RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WW+ + HT R ++ L + + +T NSPS IHP + + + VL+P
Sbjct: 211 WWHEPKVIHTACRPRMIFLERCRQV-TVQGITVRNSPSWNIHPYFSDHLRFFDLKVLNPK 269
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDGLDP+ Y G+ +AVKSG + G RPS +I++RR
Sbjct: 270 DSPNTDGLDPESCQDVEIAGVYFSLGDDCIAVKSGKIYMGSTYKRPSKDISIRRCCMRDG 329
Query: 114 TCSGVGIGREMSGRIFNVTVN 134
S V IG EM+G + N+TV
Sbjct: 330 HGS-VTIGSEMAGGVKNLTVK 349
>gi|419720997|ref|ZP_14248200.1| pectate lyase family protein [Lachnoanaerobaculum saburreum F0468]
gi|383302819|gb|EIC94301.1| pectate lyase family protein [Lachnoanaerobaculum saburreum F0468]
Length = 526
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 14/140 (10%)
Query: 6 WWNSTLKHT---RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WW K R + V L N NI + L NSPS T+HP Y N T+++P
Sbjct: 210 WWKDAKKKNIAWRPNTVFLHNCKNIAM-QGLCIMNSPSWTVHPYYSDNLLFLNNTIMNPD 268
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
++PNTDGLDP+ I G+ VA+KSG + + +P+ NI +R S
Sbjct: 269 NSPNTDGLDPESCENVLILGADISVGDDCVAIKSGKYYMALKHYKPAKNIVIRN-SIFRK 327
Query: 114 TCSGVGIGREMSGRIFNVTV 133
V IG E++ +++V+V
Sbjct: 328 GHGSVTIGSEVAAGVYDVSV 347
>gi|312794141|ref|YP_004027064.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181281|gb|ADQ41451.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 447
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 13/142 (9%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W L N LK+ R + +N+ I + NSPS T++P+ C+N V + + +P
Sbjct: 117 WRLHRNKELKYPRPRSICFYKCNNVTI-EGIKIINSPSWTVNPIECQNVTVHNVKIQNPY 175
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG++P+ CYI+ G+ V +KSG + P NI +
Sbjct: 176 DSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCI-MAH 232
Query: 114 TCSGVGIGREMSGRIFNVTVNH 135
GV IG EMSG + NV +++
Sbjct: 233 GHGGVVIGSEMSGGVRNVVISN 254
>gi|344995681|ref|YP_004798024.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963900|gb|AEM73047.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 443
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 13/142 (9%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W L N LK+ R + +N+ I + NSPS T++P+ C+N V + + +P
Sbjct: 113 WRLHRNKELKYPRPRSICFYKCNNVTI-EGIKIINSPSWTVNPIECQNVTVHNVKIQNPY 171
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG++P+ CYI+ G+ V +KSG + P NI +
Sbjct: 172 DSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCI-MAH 228
Query: 114 TCSGVGIGREMSGRIFNVTVNH 135
GV IG EMSG + NV +++
Sbjct: 229 GHGGVVIGSEMSGGVRNVVISN 250
>gi|371940174|dbj|BAL45524.1| glycoside hydrolase [Bacillus licheniformis]
Length = 436
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 12/113 (10%)
Query: 28 LIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYIES 78
++I +T NSP +HPV C N V G+ V+ PNTDG++P+ C+ ++
Sbjct: 194 ILIQGVTVLNSPMWQVHPVLCENVTVDGIKVIG--HGPNTDGVNPESCKNVVIKGCHFDN 251
Query: 79 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 131
G+ +AVKSG + DG + PS NI + + GV IG E+SG + NV
Sbjct: 252 GDDCIAVKSGRNADGRRINMPSENIVIEH-NEMKDGHGGVTIGSEISGGVKNV 303
>gi|312126393|ref|YP_003991267.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
gi|311776412|gb|ADQ05898.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
Length = 447
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 13/142 (9%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W L N LK+ R + +N+ I + NSPS T++P+ C+N V + + +P
Sbjct: 117 WRLHRNKELKYPRPRSICFYRCNNVTI-EGIKIVNSPSWTVNPIECQNVTVHNVKIQNPY 175
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG++P+ CYI+ G+ V +KSG + P NI +
Sbjct: 176 DSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCI-MAH 232
Query: 114 TCSGVGIGREMSGRIFNVTVNH 135
GV IG EMSG + NV +++
Sbjct: 233 GHGGVVIGSEMSGGVRNVVISN 254
>gi|312136085|ref|YP_004003423.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
gi|311776136|gb|ADQ05623.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
Length = 447
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 13/142 (9%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W L N LK+ R + +N+ I + NSPS T++P+ C+N V + + +P
Sbjct: 117 WRLHRNKELKYPRPRSICFYRCNNVTI-EGIKIVNSPSWTVNPIECQNVTVHNVKIQNPY 175
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG++P+ CYI+ G+ V +KSG + P NI +
Sbjct: 176 DSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCI-MAH 232
Query: 114 TCSGVGIGREMSGRIFNVTVNH 135
GV IG EMSG + NV +++
Sbjct: 233 GHGGVVIGSEMSGGVRNVVISN 254
>gi|344995379|ref|YP_004797722.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963598|gb|AEM72745.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 447
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 13/142 (9%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W L N LK+ R + +N+ I + NSPS T++P+ C+N V + + +P
Sbjct: 117 WRLHRNKELKYPRPRSICFYKCNNVTI-EGIKIINSPSWTVNPIECQNVTVHNVKIQNPY 175
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG++P+ CYI+ G+ V +KSG + P NI +
Sbjct: 176 DSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKQKIPCENITITNCI-MAH 232
Query: 114 TCSGVGIGREMSGRIFNVTVNH 135
GV IG EMSG + NV +++
Sbjct: 233 GHGGVVIGSEMSGGVRNVVISN 254
>gi|365122251|ref|ZP_09339156.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
gi|363642965|gb|EHL82299.1| hypothetical protein HMPREF1033_02502 [Tannerella sp.
6_1_58FAA_CT1]
Length = 561
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 11/144 (7%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
++ D W R L+ ++ +N+L+ +TF NSPS +HP+ C N ++ +TV +
Sbjct: 219 LKTDEEWEEVKDFLRPVLLSFIDCTNVLL-QGVTFQNSPSWNLHPLMCENVTIENLTVRN 277
Query: 61 PLSAPNTDGLD---------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P + N DGLD +C + G+ + +KSG D DG P N+ V
Sbjct: 278 PWYSQNGDGLDIESCKNTIVTNCSFDVGDDGICIKSGKDADGRKRGIPCENVIVDNCV-V 336
Query: 112 TPTCSGVGIGREMSGRIFNVTVNH 135
G +G EMSG + N++V++
Sbjct: 337 YHGHGGFVVGSEMSGGVKNISVSN 360
>gi|376338086|gb|AFB33588.1| hypothetical protein 2_7803_01, partial [Pinus mugo]
Length = 138
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 63/138 (45%), Gaps = 28/138 (20%)
Query: 87 SGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQ--- 143
SGWD GI RPSSNI +RRV G T T SG+ +G EMSG I V + ++ ++
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGETHTSSGLALGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 144 --------GSYKDRL----------------RLYG-HPKEGWDPKAIPKISGISFVNVVS 178
G KD LYG HP + +DP A+P I I+F +++
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 179 VNTTKAPVLAGIIGTQFE 196
A + GI F+
Sbjct: 121 DEIKTAGSVXGIQNAPFK 138
>gi|150004301|ref|YP_001299045.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|294776888|ref|ZP_06742351.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|149932725|gb|ABR39423.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
gi|294449364|gb|EFG17901.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 468
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R L+ L + ILI N+T NSP IHP++C + V+G+ V S PN+DG DP+
Sbjct: 213 RPQLINLYRCNTILI-ENVTLKNSPFWVIHPLFCESLTVRGVKVSS--HGPNSDGCDPES 269
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C ++G+ +A+KSG + DG PS NI VR GV +G E+S
Sbjct: 270 SKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCE-MKDGHGGVVVGSEIS 328
Query: 126 GRIFNVTVNH 135
G N+ V +
Sbjct: 329 GGYKNLFVEN 338
>gi|227537592|ref|ZP_03967641.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
gi|227242594|gb|EEI92609.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33300]
Length = 473
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 13/129 (10%)
Query: 12 KHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD 71
++ R + V+ N NILI ++ NSP ++PV C N ++ + V+S PN DG D
Sbjct: 216 QYLRPNFVQPYNCKNILI-EDIKMINSPMWNLNPVLCENVTIERVKVIS--HGPNNDGCD 272
Query: 72 P---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGR 122
P DCY ++G+ +A+KSG D DG + RP+ N + GV IG
Sbjct: 273 PEACKNVLIKDCYFDTGDDCIAIKSGRDEDGRNIGRPAENHIIENCI-MKDGHGGVVIGS 331
Query: 123 EMSGRIFNV 131
E++G N+
Sbjct: 332 EIAGGARNI 340
>gi|319644236|ref|ZP_07998749.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345519913|ref|ZP_08799321.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|254836217|gb|EET16526.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|317384227|gb|EFV65199.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 468
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R L+ L + ILI N+T NSP IHP++C + V+G+ V S PN+DG DP+
Sbjct: 213 RPQLINLYRCNTILI-ENVTLKNSPFWVIHPLFCESLTVRGVKVSS--HGPNSDGCDPES 269
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C ++G+ +A+KSG + DG PS NI VR GV +G E+S
Sbjct: 270 SKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCE-MKDGHGGVVVGSEIS 328
Query: 126 GRIFNVTVNH 135
G N+ V +
Sbjct: 329 GGYKNLFVEN 338
>gi|383150861|gb|AFG57437.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150863|gb|AFG57438.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150865|gb|AFG57439.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150867|gb|AFG57440.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150869|gb|AFG57441.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150871|gb|AFG57442.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150873|gb|AFG57443.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150875|gb|AFG57444.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150877|gb|AFG57445.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150879|gb|AFG57446.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150881|gb|AFG57447.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150883|gb|AFG57448.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150885|gb|AFG57449.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150887|gb|AFG57450.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150889|gb|AFG57451.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150891|gb|AFG57452.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
gi|383150893|gb|AFG57453.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
Length = 138
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 63/138 (45%), Gaps = 28/138 (20%)
Query: 87 SGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQ--- 143
SGWD GI RPSSNI +RRV G T T SG+ +G EMSG I V + ++ ++
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGETHTSSGLALGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 144 --------GSYKDRL----------------RLYG-HPKEGWDPKAIPKISGISFVNVVS 178
G KD LYG HP + +DP A+P I I+F +++
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 179 VNTTKAPVLAGIIGTQFE 196
A + GI F+
Sbjct: 121 DEIKTAGSVEGIQNAPFK 138
>gi|423312702|ref|ZP_17290639.1| hypothetical protein HMPREF1058_01251 [Bacteroides vulgatus
CL09T03C04]
gi|392687436|gb|EIY80729.1| hypothetical protein HMPREF1058_01251 [Bacteroides vulgatus
CL09T03C04]
Length = 468
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R L+ L + ILI N+T NSP IHP++C + V+G+ V S PN+DG DP+
Sbjct: 213 RPQLINLYRCNTILI-ENVTLKNSPFWVIHPLFCESLTVRGVKVSS--HGPNSDGCDPES 269
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C ++G+ +A+KSG + DG PS NI VR GV +G E+S
Sbjct: 270 SKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCE-MKDGHGGVVVGSEIS 328
Query: 126 GRIFNVTVNH 135
G N+ V +
Sbjct: 329 GGYKNLFVEN 338
>gi|423232717|ref|ZP_17219117.1| hypothetical protein HMPREF1063_04937 [Bacteroides dorei
CL02T00C15]
gi|423247409|ref|ZP_17228459.1| hypothetical protein HMPREF1064_04665 [Bacteroides dorei
CL02T12C06]
gi|392623156|gb|EIY17261.1| hypothetical protein HMPREF1063_04937 [Bacteroides dorei
CL02T00C15]
gi|392632549|gb|EIY26508.1| hypothetical protein HMPREF1064_04665 [Bacteroides dorei
CL02T12C06]
Length = 468
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R L+ L + ILI N+T NSP IHP++C + V+G+ V S PN+DG DP+
Sbjct: 213 RPQLINLYRCNTILI-ENVTLKNSPFWVIHPLFCESLTVRGVKVSS--HGPNSDGCDPES 269
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C ++G+ +A+KSG + DG PS NI VR GV +G E+S
Sbjct: 270 SKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCE-MKDGHGGVVVGSEIS 328
Query: 126 GRIFNVTVNH 135
G N+ V +
Sbjct: 329 GGYKNLFVEN 338
>gi|148269623|ref|YP_001244083.1| glycoside hydrolase family protein [Thermotoga petrophila RKU-1]
gi|147735167|gb|ABQ46507.1| glycoside hydrolase, family 28 [Thermotoga petrophila RKU-1]
Length = 446
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 24/184 (13%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R V+ N+L+ ++ NSP +HPV N ++ + + S + PN DG+DP
Sbjct: 185 YLRPSFVQFYRCRNVLV-EDVKIINSPMWCVHPVLSENVIIRNIEISS--TGPNNDGIDP 241
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR-RVSGTTPTCSGVGIGR 122
+ C ++G+ V +KSG D DG + PS I VR + + + G+ IG
Sbjct: 242 ESCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGS 301
Query: 123 EMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTT 182
EMSG + NV + +V+M + + LRL + + G + I F++ V+VN +
Sbjct: 302 EMSGGVRNVVARN-NVYMNVERA----LRLKTNSRRGG------YMENIFFIDNVAVNVS 350
Query: 183 KAPV 186
+ +
Sbjct: 351 EEVI 354
>gi|345513234|ref|ZP_08792756.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|229437148|gb|EEO47225.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
Length = 468
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R L+ L + ILI N+T NSP IHP++C + V+G+ V S PN+DG DP+
Sbjct: 213 RPQLINLYRCNTILI-ENVTLKNSPFWVIHPLFCESLTVRGVKVSS--HGPNSDGCDPES 269
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C ++G+ +A+KSG + DG PS NI VR GV +G E+S
Sbjct: 270 SKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCE-MKDGHGGVVVGSEIS 328
Query: 126 GRIFNVTVNH 135
G N+ V +
Sbjct: 329 GGYKNLFVEN 338
>gi|212693826|ref|ZP_03301954.1| hypothetical protein BACDOR_03347 [Bacteroides dorei DSM 17855]
gi|237709356|ref|ZP_04539837.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265755031|ref|ZP_06089945.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|423242200|ref|ZP_17223310.1| hypothetical protein HMPREF1065_03933 [Bacteroides dorei
CL03T12C01]
gi|212663715|gb|EEB24289.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229456741|gb|EEO62462.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234642|gb|EEZ20221.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|392639944|gb|EIY33752.1| hypothetical protein HMPREF1065_03933 [Bacteroides dorei
CL03T12C01]
Length = 468
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R L+ L + ILI N+T NSP IHP++C + V+G+ V S PN+DG DP+
Sbjct: 213 RPQLINLYRCNTILI-ENVTLKNSPFWVIHPLFCESLTVRGVKVSS--HGPNSDGCDPES 269
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C ++G+ +A+KSG + DG PS NI VR GV +G E+S
Sbjct: 270 SKNVLIENCIFDTGDDCIAIKSGRNADGRKWNVPSENIIVRNCE-MKDGHGGVVVGSEIS 328
Query: 126 GRIFNVTVNH 135
G N+ V +
Sbjct: 329 GGYKNLFVEN 338
>gi|329954471|ref|ZP_08295562.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328527439|gb|EGF54436.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 467
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 71/140 (50%), Gaps = 14/140 (10%)
Query: 7 WNSTLKHTRGHLVELMN--SSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSA 64
+ +K G +L+N S N ++I ++T NSP IHP++C + V+G+ V +
Sbjct: 202 YKRIMKPEDGMRPQLINLYSCNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVHVFN--RG 259
Query: 65 PNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 115
PN DG DP+ C ++G+ +A+KSG + DG PS NI VR
Sbjct: 260 PNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNQDGRKWNIPSENIIVRSCFMKNGH- 318
Query: 116 SGVGIGREMSGRIFNVTVNH 135
GV IG E+SG N+ V +
Sbjct: 319 GGVVIGSEISGGYRNLFVEN 338
>gi|170288299|ref|YP_001738537.1| glycoside hydrolase family protein [Thermotoga sp. RQ2]
gi|170175802|gb|ACB08854.1| glycoside hydrolase family 28 [Thermotoga sp. RQ2]
Length = 446
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 24/184 (13%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R V+ N+L+ ++ NSP +HPV N ++ + + S + PN DG+DP
Sbjct: 185 YLRPSFVQFYRCRNVLV-EDVKIINSPMWCVHPVLSENVIIRNIEISS--TGPNNDGIDP 241
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR-RVSGTTPTCSGVGIGR 122
+ C ++G+ V +KSG D DG + PS I VR + + + G+ IG
Sbjct: 242 ESCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGS 301
Query: 123 EMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTT 182
EMSG + NV + +V+M + + LRL + + G + I F++ V+VN +
Sbjct: 302 EMSGGVRNVVARN-NVYMNVERA----LRLKTNSRRGG------YMENIFFIDNVAVNVS 350
Query: 183 KAPV 186
+ +
Sbjct: 351 EEVI 354
>gi|427386399|ref|ZP_18882596.1| hypothetical protein HMPREF9447_03629 [Bacteroides oleiciplenus YIT
12058]
gi|425726439|gb|EKU89304.1| hypothetical protein HMPREF9447_03629 [Bacteroides oleiciplenus YIT
12058]
Length = 467
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R L+ L S N ++I ++T NSP IHP++C + V+G+ V + PN DG DP+
Sbjct: 213 RPQLINLY-SCNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVYVYN--RGPNGDGCDPES 269
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C ++G+ +A+KSG + DG PS NI VR GV IG E+S
Sbjct: 270 CKNVLIENCTFDTGDDCIAIKSGRNQDGRKWGIPSENIIVRGCY-MKKGHGGVVIGSEIS 328
Query: 126 GRIFNVTVNH 135
G N+ V +
Sbjct: 329 GGYRNLYVEN 338
>gi|325103049|ref|YP_004272703.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324971897|gb|ADY50881.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 526
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 67/128 (52%), Gaps = 12/128 (9%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R ++ MN N+ I ++ NSP TI+P YC N V G+T+ +P S PNTDG++P+
Sbjct: 184 RPPFIQFMNCKNVQI-KDIKIQNSPFWTINPQYCDNVTVDGITIDNPPS-PNTDGINPES 241
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C+I G+ + +KSG D G + P+ N + + GV IG EMS
Sbjct: 242 CRNVRIANCHISVGDDCITIKSGKDRSGRKVNIPAENYTITNCT-MLRGHGGVVIGSEMS 300
Query: 126 GRIFNVTV 133
G + N+ +
Sbjct: 301 GGVKNIAI 308
>gi|448394041|ref|ZP_21567906.1| glycoside hydrolase family 28 [Haloterrigena salina JCM 13891]
gi|445662631|gb|ELZ15395.1| glycoside hydrolase family 28 [Haloterrigena salina JCM 13891]
Length = 518
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 98/236 (41%), Gaps = 42/236 (17%)
Query: 9 STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTD 68
S+ H R L ++ S N+ + S +T NSP H VY N + + + +P APN D
Sbjct: 154 SSFTH-RPPLFQIYGSENVSV-SGVTLENSPFWNTHVVYSENVTITDVNIANPADAPNGD 211
Query: 69 GLD---------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVG 119
G+D D YI +G+ + +KSG + +G + P+S I V + GV
Sbjct: 212 GIDIDSSRYVRISDTYINAGDDAICIKSGKNAEGREVGEPASQITVTNCT-VEAGHGGVV 270
Query: 120 IGREMSGRIFNVTVNHLDV----------WMQQQGSYKDRLRL----------------- 152
IG EMSG + +VTV + + +G + LR
Sbjct: 271 IGSEMSGDVRDVTVTNCTFTDTDRGVRIKTARNRGGVVEDLRFDNIVMRRIACPFTINGY 330
Query: 153 YGHPKEG-WDP--KAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
Y P + +P + P + +SF N+ + A AG+ FE I +V +
Sbjct: 331 YFMPLDSDSEPVDEGTPMVRNVSFTNITARQVETAGFFAGLPEQYFEGISFSDVQI 386
>gi|300770984|ref|ZP_07080861.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
gi|300762257|gb|EFK59076.1| glycoside hydrolase [Sphingobacterium spiritivorum ATCC 33861]
Length = 473
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 13/129 (10%)
Query: 12 KHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD 71
++ R + V+ N NILI ++ NSP ++PV C N ++ + V+S PN DG D
Sbjct: 216 QYLRPNFVQPYNCKNILI-EDIRMINSPMWNLNPVLCENVTIERVKVIS--HGPNNDGCD 272
Query: 72 P---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGR 122
P DCY ++G+ +A+KSG D DG + RP+ N + GV IG
Sbjct: 273 PEACKNVLIKDCYFDTGDDCIAIKSGRDEDGRNIGRPAENHIIENCI-MKDGHGGVVIGS 331
Query: 123 EMSGRIFNV 131
E++G N+
Sbjct: 332 EIAGGARNI 340
>gi|361068129|gb|AEW08376.1| Pinus taeda anonymous locus 2_7803_01 genomic sequence
Length = 138
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 63/138 (45%), Gaps = 28/138 (20%)
Query: 87 SGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQ--- 143
SGWD GI RPSSNI +RRV G T T SG+ +G EMSG I V + ++ ++
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLSLGSEMSGGIKGVHAQDIQIFNSRRGLR 60
Query: 144 --------GSYKDRL----------------RLYG-HPKEGWDPKAIPKISGISFVNVVS 178
G KD LYG HP + +DP A+P I I+F +++
Sbjct: 61 IKTAPGRGGYVKDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALPDIQRITFKDIIG 120
Query: 179 VNTTKAPVLAGIIGTQFE 196
A + GI F+
Sbjct: 121 DEIKTAGSVEGIQNAPFK 138
>gi|421078108|ref|ZP_15539067.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
gi|392523693|gb|EIW46860.1| glycoside hydrolase family 28 [Pelosinus fermentans JBW45]
Length = 453
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 66/132 (50%), Gaps = 13/132 (9%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R ++ NS NILI +T +SP I PV C N + + ++ PNTDG +P
Sbjct: 199 YLRPSFIQFYNSKNILI-EGITVKDSPMWQISPVLCENITIDKVKIVG--HGPNTDGFNP 255
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
D CY +G+ +A+KSG + DG + P NI ++ + G+ IG E
Sbjct: 256 DSCKNILIKNCYFNNGDDCIAIKSGRNGDGRRINIPCENIVIQN-NYMKDGHGGITIGSE 314
Query: 124 MSGRIFNVTVNH 135
+SG + NV +H
Sbjct: 315 ISGSVRNVFADH 326
>gi|254392545|ref|ZP_05007723.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|197706210|gb|EDY52022.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 462
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 69/128 (53%), Gaps = 13/128 (10%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
H R ++++ + NIL+ ++T P TIHPV CRN ++ + V+ ++ N+DG+DP
Sbjct: 203 HLRPNMIQFYDCRNILM-QDITVLEPPMWTIHPVLCRNVTLRNVDVIGRIN--NSDGVDP 259
Query: 73 DC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+C + + +AVKSG D DG + PS NI +R + GV +G E
Sbjct: 260 ECTSDMLITGCRFHTEDDSIAVKSGRDEDGHRIGVPSRNIVIRDCV-FSGRWGGVAVGSE 318
Query: 124 MSGRIFNV 131
MSG + +V
Sbjct: 319 MSGGVRDV 326
>gi|52081815|ref|YP_080606.1| glycoside hydrolase family protein [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|319647732|ref|ZP_08001950.1| hypothetical protein HMPREF1012_02989 [Bacillus sp. BT1B_CT2]
gi|404490699|ref|YP_006714805.1| glycoside hydrolase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423683814|ref|ZP_17658653.1| glycoside hydrolase family protein [Bacillus licheniformis WX-02]
gi|52005026|gb|AAU24968.1| Glycoside Hydrolase Family 28 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52349704|gb|AAU42338.1| putative glycoside hydrolase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317390073|gb|EFV70882.1| hypothetical protein HMPREF1012_02989 [Bacillus sp. BT1B_CT2]
gi|383440588|gb|EID48363.1| glycoside hydrolase family protein [Bacillus licheniformis WX-02]
Length = 436
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 12/113 (10%)
Query: 28 LIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYIES 78
++I +T NSP +HPV C N V G+ V+ PNTDG++P+ C+ ++
Sbjct: 194 ILIQGVTVLNSPMWQVHPVLCENVTVDGIKVIG--HGPNTDGVNPESCKNVVIKGCHFDN 251
Query: 79 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 131
G+ +AVKSG + DG + PS NI + + GV IG E+SG + NV
Sbjct: 252 GDDCIAVKSGRNADGRRINIPSENIVIEH-NEMKDGHGGVTIGSEISGGVKNV 303
>gi|338730196|ref|YP_004659588.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
gi|335364547|gb|AEH50492.1| glycoside hydrolase family 28 [Thermotoga thermarum DSM 5069]
Length = 515
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 108/252 (42%), Gaps = 52/252 (20%)
Query: 4 DLWWNSTLKHT--RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
D W+N +K R + L NILI +T NSPS T+HP++C++ + + +++P
Sbjct: 206 DWWFNPKVKRIAWRPRSIFLNRCKNILI-EGITIRNSPSWTVHPLFCKDLKLLTLNIVNP 264
Query: 62 LSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
++PNTDG++P+ C I G+ VAVK+G PS NI +R
Sbjct: 265 KNSPNTDGINPESCSNVLIAGCRISVGDDCVAVKAGKYEVKQKFDVPSENIEIRNCL-ME 323
Query: 113 PTCSGVGIGREMSGRIFNVTV-NHLDV---------WMQQQGSYKDRLRLYGHPKEG--- 159
V IG EMS + NV V N L V +++G Y D + L G
Sbjct: 324 HGHGAVVIGSEMSCGVRNVKVSNCLFVNTDRGLRIKTRRERGGYVDEIELKNVQMNGVFV 383
Query: 160 -------------WDP------------KAIPKISGISFVNVVSVNT-TKAPVLAGIIGT 193
+DP + P I I NV+ + + A + G+
Sbjct: 384 PLAINCFYNCGADYDPLYSSDKVVADVNERTPTIGSIVMKNVLCEDVKSMAAFVYGLPEK 443
Query: 194 QFEEICMKNVSL 205
+ E+I M+NV +
Sbjct: 444 KIEKIYMENVRI 455
>gi|375100956|ref|ZP_09747219.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661688|gb|EHR61566.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 557
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 67/132 (50%), Gaps = 12/132 (9%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
H R + V+ +S NIL+ +T NSP IHPV N V G+ + SP PN DG++P
Sbjct: 224 HLRPNFVQFYDSRNILV-QGVTLKNSPMWMIHPVLSHNITVDGVVLDSP-EGPNNDGVNP 281
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+ ++G+ +A+KSG + DG + PS NI + + GV +G E
Sbjct: 282 ESSRDVVIKNSRFDNGDDCIAIKSGRNADGRRIGVPSENILIEN-NHMQDGHGGVVMGSE 340
Query: 124 MSGRIFNVTVNH 135
MSG + NV H
Sbjct: 341 MSGSVRNVFAQH 352
>gi|329960859|ref|ZP_08299138.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328532145|gb|EGF58949.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 488
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R LV L S N ++I ++T NSP IHP++C + V+G+ V + PN DG DP+
Sbjct: 234 RPQLVNLY-SCNTVLIEDITLLNSPFWVIHPLFCESLTVRGVKVFN--RGPNGDGCDPES 290
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C ++G+ +A+KSG + DG PS NI VR GV IG E+S
Sbjct: 291 CKNVLIENCTFDTGDDCIAIKSGRNADGRKWNIPSENIIVRNCFMKNGH-GGVVIGSEIS 349
Query: 126 GRIFNVTVNH 135
G N+ V +
Sbjct: 350 GGYRNLYVEN 359
>gi|268612424|pdb|3JUR|A Chain A, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612425|pdb|3JUR|B Chain B, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612426|pdb|3JUR|C Chain C, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
gi|268612427|pdb|3JUR|D Chain D, The Crystal Structure Of A Hyperthermoactive
Exopolygalacturonase From Thermotoga Maritima
Length = 448
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 24/184 (13%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R V+ N+L+ + NSP IHPV N ++ + + S + PN DG+DP
Sbjct: 187 YLRPSFVQFYRCRNVLV-EGVKIINSPMWCIHPVLSENVIIRNIEISS--TGPNNDGIDP 243
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR-RVSGTTPTCSGVGIGR 122
+ C ++G+ V +KSG D DG + PS I VR + + + G+ IG
Sbjct: 244 ESCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGS 303
Query: 123 EMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTT 182
EMSG + NV + +V+M + + LRL + + G + I F++ V+VN +
Sbjct: 304 EMSGGVRNVVARN-NVYMNVERA----LRLKTNSRRGG------YMENIFFIDNVAVNVS 352
Query: 183 KAPV 186
+ +
Sbjct: 353 EEVI 356
>gi|373469919|ref|ZP_09561077.1| polygalacturonase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
gi|371763536|gb|EHO52007.1| polygalacturonase [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
Length = 526
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 6 WWNSTLKHT---RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WW K R + V L N NI + L NSPS T+HP Y N T+++P
Sbjct: 210 WWKDAKKKNIAWRPNTVFLYNCKNIAM-QGLCIMNSPSWTLHPYYSDNLLFLNNTIMNPD 268
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
++PNTDGLDP+ I G+ VA+KSG + + +P+ NI +R S
Sbjct: 269 NSPNTDGLDPESCENVLILGADISVGDDCVAIKSGKYYMALKHYKPAKNIVIRN-SIFRK 327
Query: 114 TCSGVGIGREMSGRIFNVTV 133
V IG E++ +++V V
Sbjct: 328 GHGSVTIGSEVAAGVYDVRV 347
>gi|431798433|ref|YP_007225337.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789198|gb|AGA79327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 477
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 13/135 (9%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R V+ N+L+ + NSP ++PV C N ++G+TV S PN+DG DP
Sbjct: 221 YLRPQFVQPYRCKNVLV-EGVKIVNSPMWILNPVLCENVTIEGVTVES--HGPNSDGCDP 277
Query: 73 ---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
DCY +G+ +A+KSG + DG + PS NI ++ GV IG E
Sbjct: 278 ESSKNVLIKDCYFNTGDDCIAIKSGRNADGRRINVPSENIIIQNCK-MADGHGGVVIGSE 336
Query: 124 MSGRIFNVTVNHLDV 138
+SG + NV + ++
Sbjct: 337 ISGGVRNVFAENCEM 351
>gi|167763470|ref|ZP_02435597.1| hypothetical protein BACSTE_01844 [Bacteroides stercoris ATCC
43183]
gi|167698764|gb|EDS15343.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 467
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 71/140 (50%), Gaps = 14/140 (10%)
Query: 7 WNSTLKHTRGHLVELMN--SSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSA 64
+ +K G +L+N S N ++I ++T NSP IHP++C + V+G+ V +
Sbjct: 202 YKRIMKPEDGMRPQLINLYSCNTVLIEDVTLLNSPFWVIHPLFCESLIVRGVHVFN--RG 259
Query: 65 PNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 115
PN DG DP+ C ++G+ +A+KSG + DG PS NI VR
Sbjct: 260 PNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNQDGRKWNIPSENIIVRGCFMKNGH- 318
Query: 116 SGVGIGREMSGRIFNVTVNH 135
GV IG E+SG N+ V +
Sbjct: 319 GGVVIGSEISGGYRNLFVEN 338
>gi|357051036|ref|ZP_09112232.1| hypothetical protein HMPREF9478_02215 [Enterococcus saccharolyticus
30_1]
gi|355380661|gb|EHG27797.1| hypothetical protein HMPREF9478_02215 [Enterococcus saccharolyticus
30_1]
Length = 437
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 33/153 (21%)
Query: 3 WDLWWN--STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
WD++ N L++ R L+ +S + + +++ NSPS T++P+ C++ V + + +
Sbjct: 115 WDVFRNHPEQLEYPRPKLISF-DSCQQITLRDVSLVNSPSWTVNPILCQDITVDNIKIKN 173
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P +PNTDG+DP+ C I+ G+ +A+KSG + RVS
Sbjct: 174 PADSPNTDGIDPESCKNVRISNCLIDVGDDCIAIKSGTEE------------TKERVSCE 221
Query: 112 TPTCS---------GVGIGREMSGRIFNVTVNH 135
T S GV +G EMSG I NVT+++
Sbjct: 222 NITISNCQMLHGHGGVVLGSEMSGDIRNVTISN 254
>gi|294816001|ref|ZP_06774644.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
gi|326444344|ref|ZP_08219078.1| glycoside hydrolase family 28 [Streptomyces clavuligerus ATCC
27064]
gi|294328600|gb|EFG10243.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
Length = 477
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 69/128 (53%), Gaps = 13/128 (10%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
H R ++++ + NIL+ ++T P TIHPV CRN ++ + V+ ++ N+DG+DP
Sbjct: 218 HLRPNMIQFYDCRNILM-QDITVLEPPMWTIHPVLCRNVTLRNVDVIGRIN--NSDGVDP 274
Query: 73 DC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+C + + +AVKSG D DG + PS NI +R + GV +G E
Sbjct: 275 ECTSDMLITGCRFHTEDDSIAVKSGRDEDGHRIGVPSRNIVIRDCV-FSGRWGGVAVGSE 333
Query: 124 MSGRIFNV 131
MSG + +V
Sbjct: 334 MSGGVRDV 341
>gi|257869845|ref|ZP_05649498.1| galacturan 1,4-alpha-galacturonidase [Enterococcus gallinarum EG2]
gi|257804009|gb|EEV32831.1| galacturan 1,4-alpha-galacturonidase [Enterococcus gallinarum EG2]
Length = 437
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 33/153 (21%)
Query: 3 WDLWWN--STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
WD++ N L++ R L+ +S + + +++ NSPS T++P+ C++ V + + +
Sbjct: 115 WDVFRNHPEQLEYPRPKLISF-DSCQQITLRDVSLVNSPSWTVNPILCQDITVDNIKIKN 173
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P +PNTDG+DP+ C I+ G+ +A+KSG + RVS
Sbjct: 174 PADSPNTDGIDPESCKNVRISNCLIDVGDDCIAIKSGTEE------------TKERVSCE 221
Query: 112 TPTCS---------GVGIGREMSGRIFNVTVNH 135
T S GV +G EMSG I NVT+++
Sbjct: 222 NITISNCQMLHGHGGVVLGSEMSGDIRNVTISN 254
>gi|224540752|ref|ZP_03681291.1| hypothetical protein BACCELL_05666 [Bacteroides cellulosilyticus
DSM 14838]
gi|423224671|ref|ZP_17211139.1| hypothetical protein HMPREF1062_03325 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224517619|gb|EEF86724.1| hypothetical protein BACCELL_05666 [Bacteroides cellulosilyticus
DSM 14838]
gi|392635111|gb|EIY29017.1| hypothetical protein HMPREF1062_03325 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 467
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R L+ L S N ++I ++T NSP IHP++C + V+G+ V + PN DG DP+
Sbjct: 213 RPQLINLY-SCNTVLIEDVTLLNSPFWVIHPLFCESLTVRGVYVYN--RGPNGDGCDPES 269
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C ++G+ +A+KSG + DG PS NI VR GV IG E+S
Sbjct: 270 CKNVLIENCTFDTGDDCIAIKSGRNQDGRKWGVPSENIIVRGCY-MKKGHGGVVIGSEIS 328
Query: 126 GRIFNVTVNH 135
G N+ V +
Sbjct: 329 GGYRNLYVEN 338
>gi|452973315|gb|EME73137.1| glycoside hydrolase [Bacillus sonorensis L12]
Length = 436
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 13/131 (9%)
Query: 10 TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDG 69
T + R + ++ N+ I +T NSP IHPV C N V G+ V+ PNTDG
Sbjct: 177 TGHYLRPNFIQPYRCKNVFI-QGVTVMNSPMWQIHPVLCENVTVDGVKVIG--HGPNTDG 233
Query: 70 LDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGI 120
+DP+ C ++G+ +A+KSG + DG + PS NI + + GV I
Sbjct: 234 VDPESCKSMIIKNCLFDNGDDCIAIKSGRNADGRRINVPSENIVIEN-NEMKDGHGGVTI 292
Query: 121 GREMSGRIFNV 131
G E+SG + NV
Sbjct: 293 GSEISGGVKNV 303
>gi|381180485|ref|ZP_09889325.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
gi|380767666|gb|EIC01665.1| glycoside hydrolase family 28 [Treponema saccharophilum DSM 2985]
Length = 453
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 75/143 (52%), Gaps = 11/143 (7%)
Query: 11 LKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGL 70
++ R L+E+ + N+ + + +SP T+HP+Y +N ++G+ + +P +APNTDG+
Sbjct: 159 IQFLRPSLLEISFAENVSV-EGIEIKDSPFWTVHPLYVKNLTLRGIKIDNPYTAPNTDGI 217
Query: 71 D---------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIG 121
D DC++ G+ + +KSG DGI A+P+ N+ +R + G+ IG
Sbjct: 218 DVDSCENVVIEDCFVSVGDDGICIKSGSGPDGIRCAKPTVNVEIRNCT-VRNAHGGIVIG 276
Query: 122 REMSGRIFNVTVNHLDVWMQQQG 144
E + + ++ D+ +G
Sbjct: 277 SETAAGMSHIHAVGCDLSGTDRG 299
>gi|312621274|ref|YP_004022887.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
gi|312201741|gb|ADQ45068.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
Length = 447
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 13/142 (9%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W L N LK+ R + +N+ I + NSPS T++P+ C+N V + + +P
Sbjct: 117 WRLHRNKELKYPRPRSICFYRCNNVTI-EGIKIINSPSWTVNPIECQNVTVHNIKIQNPY 175
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG++P+ CYI+ G+ V +KSG + P NI +
Sbjct: 176 DSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKERIPCENITITNCI-MAH 232
Query: 114 TCSGVGIGREMSGRIFNVTVNH 135
GV IG EMSG + NV +++
Sbjct: 233 GHGGVVIGSEMSGGVRNVVISN 254
>gi|253573347|ref|ZP_04850690.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. oral taxon
786 str. D14]
gi|251846875|gb|EES74880.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. oral taxon
786 str. D14]
Length = 442
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 75/145 (51%), Gaps = 19/145 (13%)
Query: 6 WWN------STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
WW L + R L+ + + I +++ +SPS T++P+ C N + +++L
Sbjct: 117 WWEKQRNRPEELHYPRPKLISF-DRCRRVTIRDVSLVDSPSWTVNPIRCHNVTIDNVSIL 175
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG++P+ C+I+ G+ +A+K+G + A P NI + +
Sbjct: 176 NPADSPNTDGINPESCSNVRISNCHIDVGDDCIAIKAGTEE--TAERVPCENITITNCT- 232
Query: 111 TTPTCSGVGIGREMSGRIFNVTVNH 135
GV IG EMSG I NVT+++
Sbjct: 233 MIHGHGGVVIGSEMSGNIRNVTISN 257
>gi|222530340|ref|YP_002574222.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
gi|222457187|gb|ACM61449.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
Length = 447
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 13/142 (9%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W L N LK+ R + +N+ I + NSPS T++P+ C+N V + + +P
Sbjct: 117 WRLHRNKELKYPRPRSICFYRCNNVTI-EGIKIINSPSWTVNPIECQNVTVHNIKIQNPY 175
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG++P+ CYI+ G+ V +KSG + P NI +
Sbjct: 176 DSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKERIPCENITITNCI-MAH 232
Query: 114 TCSGVGIGREMSGRIFNVTVNH 135
GV IG EMSG + NV +++
Sbjct: 233 GHGGVVIGSEMSGGVRNVVISN 254
>gi|157693735|ref|YP_001488197.1| glycoside hydrolase [Bacillus pumilus SAFR-032]
gi|157682493|gb|ABV63637.1| glycoside hydrolase [Bacillus pumilus SAFR-032]
Length = 463
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 12/108 (11%)
Query: 28 LIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP---------DCYIES 78
++I +T +SP IHPV + V+G+ ++ PNTDG++P DCY ++
Sbjct: 224 VLIEGVTVKDSPMWQIHPVLSEHVIVRGVHIIG--HGPNTDGVNPESCRNVLIEDCYFDN 281
Query: 79 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSG 126
G+ +A+KSG + DG + PS NI +RR + GV IG E+SG
Sbjct: 282 GDDCIAIKSGRNEDGRRIGIPSENIVIRR-NEMRDGHGGVTIGSEISG 328
>gi|196228364|ref|ZP_03127231.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
gi|196227767|gb|EDY22270.1| glycoside hydrolase family 28 [Chthoniobacter flavus Ellin428]
Length = 456
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 66/129 (51%), Gaps = 13/129 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP-- 72
R +E N+LI +T NSP IHP C N V+G+TV S N DG DP
Sbjct: 206 RPSFIEPYRCKNVLI-EGVTIVNSPMWEIHPTLCTNVTVRGVTVHS--LGTNNDGCDPES 262
Query: 73 -------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
DC ++G+ +A+KSG ++DG + + NI +RR + GV IG E+S
Sbjct: 263 CHDVLIEDCTFQTGDDCIAIKSGRNNDGRRVGVAAENIIIRRCT-MKDGHGGVTIGSEVS 321
Query: 126 GRIFNVTVN 134
G + NV V+
Sbjct: 322 GGVRNVFVS 330
>gi|374376429|ref|ZP_09634087.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373233269|gb|EHP53064.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 517
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 70/131 (53%), Gaps = 12/131 (9%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS-APNTDGLDP- 72
R ++ ++S NILI + NSP TI+P +C N V +T+ +P S APNTDG++P
Sbjct: 179 RPPFIQFLHSKNILI-EGIMIRNSPFWTINPGFCENVTVHAVTINNPGSNAPNTDGINPE 237
Query: 73 --------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREM 124
DC+I G+ + +KSG D G + RP+ N + + GV IG EM
Sbjct: 238 SCSNVHISDCHISVGDDCITIKSGKDIPGRSKNRPAENYTITNCT-MLRGHGGVVIGSEM 296
Query: 125 SGRIFNVTVNH 135
SG + + +++
Sbjct: 297 SGGVKKIAISN 307
>gi|345013580|ref|YP_004815934.1| glycoside hydrolase [Streptomyces violaceusniger Tu 4113]
gi|344039929|gb|AEM85654.1| glycoside hydrolase family 28 [Streptomyces violaceusniger Tu 4113]
Length = 484
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 71/135 (52%), Gaps = 17/135 (12%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC 74
R +V+ N+L+ S+LT + P T+HPV N V+G+TV S L NTDG DP+C
Sbjct: 223 RPKMVQFYRCRNVLV-SDLTIVDPPMWTVHPVLSSNVTVRGVTVDSTLY--NTDGCDPEC 279
Query: 75 ---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVR--RVSGTTPTCSGVGIGRE 123
+ + VAVKSG D DG + PS NI VR + SG G+ +G E
Sbjct: 280 CSDVLITGCRFNTNDDCVAVKSGRDEDGHRVGVPSRNIVVRDCQFSG---RWGGMTVGSE 336
Query: 124 MSGRIFNVTVNHLDV 138
MSG + ++ + ++
Sbjct: 337 MSGGVRDIFAENCEI 351
>gi|126009432|gb|ABM30197.2| polygalacturonase [Brassica juncea]
Length = 278
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP- 61
W + + L HTRG LV++M SS+ + +N+T +SP T+HP C+N + MT+L+P
Sbjct: 206 WKKYRSKLLNHTRGPLVQIMWSSDA-VFANITLRDSPFWTLHPYDCKNVTITNMTILAPV 264
Query: 62 LSAPNTDGLDPDC 74
APNTDG+DPD
Sbjct: 265 FEAPNTDGIDPDS 277
>gi|281419728|ref|ZP_06250727.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM
18205]
gi|281406257|gb|EFB36937.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM
18205]
Length = 873
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 13/133 (9%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R LV + S ILI ++ NSP +HP+ C++ V G+TV + PN DG DP+
Sbjct: 214 RPQLVNFVRSERILI-KDVKMINSPFWVMHPLLCKDITVDGVTVWN--EGPNGDGCDPEA 270
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C +G+ +A+KSG ++DG +PS NI +R GV IG E+S
Sbjct: 271 CENVLIQNCIFHTGDDCIAIKSGRNNDGRLWNKPSKNIIIRNCR-MEDGHGGVVIGSEIS 329
Query: 126 GRIFNVTVNHLDV 138
G NV + ++
Sbjct: 330 GGCENVYAENCEM 342
>gi|189466414|ref|ZP_03015199.1| hypothetical protein BACINT_02789 [Bacteroides intestinalis DSM
17393]
gi|189434678|gb|EDV03663.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 467
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R L+ L S N ++I ++T NSP IHP++C + V+G+ V + PN DG DP+
Sbjct: 213 RPQLINLY-SCNTVLIEDVTLLNSPFWVIHPLFCESLTVRGVYVYN--RGPNGDGCDPES 269
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C ++G+ +A+KSG + DG PS NI VR GV IG E+S
Sbjct: 270 CKNVLIENCTFDTGDDCIAIKSGRNQDGRKWGIPSENIIVRGCY-MKKGHGGVVIGSEIS 328
Query: 126 GRIFNVTVNH 135
G N+ V +
Sbjct: 329 GGYRNLYVEN 338
>gi|393787524|ref|ZP_10375656.1| hypothetical protein HMPREF1068_01936 [Bacteroides nordii
CL02T12C05]
gi|392658759|gb|EIY52389.1| hypothetical protein HMPREF1068_01936 [Bacteroides nordii
CL02T12C05]
Length = 467
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 66/130 (50%), Gaps = 13/130 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R L+ L S +LI ++T NSP IHP++C + V+G+ + + PN DG DP+
Sbjct: 213 RPQLINLYACSTVLI-EDVTLLNSPFWVIHPLFCESLIVRGVNIFN--RGPNGDGCDPES 269
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C ++G+ +A+KSG + DG PS NI VR GV IG E+S
Sbjct: 270 CKNVLIENCTFDTGDDCIAIKSGRNADGRKWNIPSENIIVRNCKMKNGH-GGVVIGSEIS 328
Query: 126 GRIFNVTVNH 135
G N+ V +
Sbjct: 329 GGYRNLFVEN 338
>gi|448419310|ref|ZP_21580352.1| exo-poly-alpha-D-galacturonosidase precursor [Halosarcina pallida
JCM 14848]
gi|445675300|gb|ELZ27833.1| exo-poly-alpha-D-galacturonosidase precursor [Halosarcina pallida
JCM 14848]
Length = 541
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 100/235 (42%), Gaps = 41/235 (17%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD--- 71
R L+++ N+ +S +T NSP H VY + + +++ +P APN DG+D
Sbjct: 177 RPPLLQIHECENV-TVSGVTLRNSPFWNTHVVYSEDVTIHDVSIRNPPDAPNGDGIDIDS 235
Query: 72 ------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
D +I++G+ + +KSG D +G + RP+ N+ V + GV +G E +
Sbjct: 236 SRFVRVSDTHIDAGDDAICLKSGKDEEGREVGRPTENVVVTNCT-VEHGHGGVVVGSETA 294
Query: 126 GRIFNVTVNHLDVWMQQQG----SYKDR------LRL----------------YGHPKEG 159
G + +VTV + +G S + R LR Y
Sbjct: 295 GDVRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIVMRRVACPFVLNGYYQTDID 354
Query: 160 WDPK----AIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLVQAP 210
DPK A P + ++F ++ + A LAG+ +FE I +V + P
Sbjct: 355 SDPKPVDEATPNVRNVNFHHITAEEVESAAFLAGLPERRFEGISFTDVDIDATRP 409
>gi|373849855|ref|ZP_09592656.1| Polygalacturonase [Opitutaceae bacterium TAV5]
gi|372476020|gb|EHP36029.1| Polygalacturonase [Opitutaceae bacterium TAV5]
Length = 916
Score = 66.2 bits (160), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 12/115 (10%)
Query: 28 LIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS--APNTDGLDPD---------CYI 76
++I +TF +SPS T+ PV+C + ++ T+L+P S + NTDG+DPD C +
Sbjct: 185 VLIEGVTFRDSPSWTLQPVWCADLTLRHSTILNPPSPFSHNTDGIDPDACRNVLIEHCVV 244
Query: 77 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 131
++G+ + +K+G D D P NI +R G+ IG EMS + N+
Sbjct: 245 DTGDDAICIKAGRDEDAWEAGIPCENILIRHCE-IRSGHGGITIGSEMSAGVRNL 298
>gi|254444100|ref|ZP_05057576.1| Polygalacturonase superfamily [Verrucomicrobiae bacterium DG1235]
gi|198258408|gb|EDY82716.1| Polygalacturonase superfamily [Verrucomicrobiae bacterium DG1235]
Length = 476
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 67/120 (55%), Gaps = 12/120 (10%)
Query: 28 LIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYIES 78
++I ++T NSP IHPV RN V+G+TV+S S N DG +P+ C ++
Sbjct: 231 VLIEDVTIINSPMWEIHPVLSRNVTVRGVTVVSHGS--NNDGCNPESSKDVLIENCVFDT 288
Query: 79 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNHLDV 138
G+ +A+KSG ++DG + PS NI VR GV IG E+SG + NV V + ++
Sbjct: 289 GDDCIAIKSGRNNDGRRVNVPSENIIVRNCK-MKDGHGGVVIGSEISGGVRNVFVENCEM 347
>gi|340348164|ref|ZP_08671257.1| glycoside hydrolase [Prevotella dentalis DSM 3688]
gi|433652999|ref|YP_007296853.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
gi|339607813|gb|EGQ12738.1| glycoside hydrolase [Prevotella dentalis DSM 3688]
gi|433303532|gb|AGB29347.1| endopolygalacturonase [Prevotella dentalis DSM 3688]
Length = 857
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 67/134 (50%), Gaps = 15/134 (11%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R LV N+ + +++ LT NSP IHP+ N V G+TV + PN DG DP+
Sbjct: 211 RPQLVNF-NACDGILVEGLTLANSPFWVIHPLLSTNITVDGVTVTN--DGPNGDGCDPEA 267
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C ++G+ +A+KSG ++DG RPS NI +R GV IG E+S
Sbjct: 268 CSNVLIQNCTFDTGDDCIAIKSGRNNDGRLWNRPSENIIIRHCK-MKDGHGGVVIGSEIS 326
Query: 126 GRIFNVTVN--HLD 137
G NV H+D
Sbjct: 327 GGCRNVFAEDCHMD 340
>gi|15643203|ref|NP_228247.1| exo-poly-alpha-D-galacturonosidase [Thermotoga maritima MSB8]
gi|4980944|gb|AAD35522.1|AE001722_6 exo-poly-alpha-D-galacturonosidase, putative [Thermotoga maritima
MSB8]
Length = 448
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 24/184 (13%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R V+ N+L+ + NSP +HPV N ++ + + S + PN DG+DP
Sbjct: 187 YLRPSFVQFYRCRNVLV-EGVKIINSPMWCVHPVLSENVIIRNIEISS--TGPNNDGIDP 243
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR-RVSGTTPTCSGVGIGR 122
+ C ++G+ V +KSG D DG + PS I VR + + + G+ IG
Sbjct: 244 ESCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGS 303
Query: 123 EMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTT 182
EMSG + NV + +V+M + + LRL + + G + I F++ V+VN +
Sbjct: 304 EMSGGVRNVVARN-NVYMNVERA----LRLKTNSRRGG------YMENIFFIDNVAVNVS 352
Query: 183 KAPV 186
+ +
Sbjct: 353 EEVI 356
>gi|418045389|ref|ZP_12683485.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
gi|351678471|gb|EHA61618.1| glycoside hydrolase family 28 [Thermotoga maritima MSB8]
Length = 446
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 24/184 (13%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R V+ N+L+ + NSP +HPV N ++ + + S + PN DG+DP
Sbjct: 185 YLRPSFVQFYRCRNVLV-EGVKIINSPMWCVHPVLSENVIIRNIEISS--TGPNNDGIDP 241
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR-RVSGTTPTCSGVGIGR 122
+ C ++G+ V +KSG D DG + PS I VR + + + G+ IG
Sbjct: 242 ESCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGS 301
Query: 123 EMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTT 182
EMSG + NV + +V+M + + LRL + + G + I F++ V+VN +
Sbjct: 302 EMSGGVRNVVARN-NVYMNVERA----LRLKTNSRRGG------YMENIFFIDNVAVNVS 350
Query: 183 KAPV 186
+ +
Sbjct: 351 EEVI 354
>gi|237721278|ref|ZP_04551759.1| LOW QUALITY PROTEIN: glycoside hydrolase family 28 protein
[Bacteroides sp. 2_2_4]
gi|229449074|gb|EEO54865.1| LOW QUALITY PROTEIN: glycoside hydrolase family 28 protein
[Bacteroides sp. 2_2_4]
Length = 380
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 7 WNSTLKHTRGHLVELMN--SSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSA 64
+ +K G +L+N S + ++I +T NSP IHP++C + V G+TV +
Sbjct: 115 YKRLMKPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN--RG 172
Query: 65 PNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 115
PN DG DP+ C ++G+ +A+KSG + DG PS NI VR
Sbjct: 173 PNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGH- 231
Query: 116 SGVGIGREMSGRIFNVTV 133
GV IG E+SG N+ V
Sbjct: 232 GGVVIGSEISGGYRNLFV 249
>gi|431796309|ref|YP_007223213.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787074|gb|AGA77203.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 524
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 12/134 (8%)
Query: 11 LKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGL 70
LK R L++ N+ I +T NSP T++P +C N + G+T+ +P S PNTDG+
Sbjct: 184 LKFFRPPLIQPFRCKNVRI-EGVTIVNSPFWTVNPAFCDNVTITGVTIENPPS-PNTDGI 241
Query: 71 DP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIG 121
+P D +I G+ + +KSG D DG P+ N+ + + + GV IG
Sbjct: 242 NPTSCRNVHISDSHISVGDDCITIKSGRDMDGRKWDTPTENVTITNCTMLS-GHGGVVIG 300
Query: 122 REMSGRIFNVTVNH 135
E+SG I VT+++
Sbjct: 301 SEVSGSIRKVTISN 314
>gi|420156232|ref|ZP_14663077.1| pectate lyase family protein [Clostridium sp. MSTE9]
gi|394757879|gb|EJF40876.1| pectate lyase family protein [Clostridium sp. MSTE9]
Length = 511
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 6 WWNSTLKHTRGHL---VELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WWN K R + V L+N S+I + LT NS + IHP+Y N G+T+ S
Sbjct: 207 WWNEPKKKNRAYRPRNVSLVNCSDI-TVCGLTSQNSAAWNIHPLYSSNLAFYGLTIQSDP 265
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDGL+P+ C + G+ +A+KSG RPS I VRR
Sbjct: 266 DSPNTDGLNPESCENVEIVGCRFQVGDDCIAIKSGKLFLSRRHLRPSRKITVRRCL-MEE 324
Query: 114 TCSGVGIGREMSGRIFNVTVNH 135
GV IG E+S + +V V +
Sbjct: 325 GHGGVVIGSEISCGVQDVLVQN 346
>gi|332685997|ref|YP_004455771.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
gi|332370006|dbj|BAK20962.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
Length = 442
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 18/145 (12%)
Query: 6 WWN------STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
WW L + R +L+ SS I IS+L SPS T+HP+ C + ++ +++L
Sbjct: 119 WWKLHRETPEKLAYPRPYLIGFDYSSRI-TISDLNLTMSPSWTVHPMECYDVTIQNISIL 177
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG+DP+ C I+ G+ +A+KSG + + + NI + +
Sbjct: 178 NPADSPNTDGIDPESCKNLRILNCNIDVGDDCIAIKSGTEQTTTSKSA-CENITISNCT- 235
Query: 111 TTPTCSGVGIGREMSGRIFNVTVNH 135
V +G EMS I NVT+++
Sbjct: 236 MVHGHGAVVLGSEMSRNIRNVTISN 260
>gi|255532707|ref|YP_003093079.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255345691|gb|ACU05017.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 542
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 12/131 (9%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS-APNTDGLDPD 73
R ++ M N+ I +T NSP T++P +C N + +T+ +P S APNTDG++P+
Sbjct: 197 RPPFIQTMYCKNVFI-EGITIRNSPFWTVNPEFCENVTIHAVTINNPGSFAPNTDGINPE 255
Query: 74 ---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREM 124
C+I G+ + +KSG D G MA P+ N + + + GV IG EM
Sbjct: 256 SCNNVHISNCHISVGDDCITIKSGKDAPGRKMAAPAQNYTITNCTMLSGH-GGVVIGSEM 314
Query: 125 SGRIFNVTVNH 135
SG + +++++
Sbjct: 315 SGDVRKISISN 325
>gi|383114434|ref|ZP_09935198.1| hypothetical protein BSGG_1394 [Bacteroides sp. D2]
gi|313693859|gb|EFS30694.1| hypothetical protein BSGG_1394 [Bacteroides sp. D2]
Length = 469
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 7 WNSTLKHTRGHLVELMN--SSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSA 64
+ +K G +L+N S + ++I +T NSP IHP++C + V G+TV +
Sbjct: 204 YKRLMKPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN--RG 261
Query: 65 PNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 115
PN DG DP+ C ++G+ +A+KSG + DG PS NI VR
Sbjct: 262 PNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGH- 320
Query: 116 SGVGIGREMSGRIFNVTV 133
GV IG E+SG N+ V
Sbjct: 321 GGVVIGSEISGGYRNLFV 338
>gi|298480639|ref|ZP_06998835.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298273073|gb|EFI14638.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 469
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 7 WNSTLKHTRGHLVELMN--SSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSA 64
+ +K G +L+N S + ++I +T NSP IHP++C + V G+TV +
Sbjct: 204 YKRLMKPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN--RG 261
Query: 65 PNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 115
PN DG DP+ C ++G+ +A+KSG + DG PS NI VR
Sbjct: 262 PNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMKNGH- 320
Query: 116 SGVGIGREMSGRIFNVTV 133
GV IG E+SG N+ V
Sbjct: 321 GGVVIGSEISGGYRNLFV 338
>gi|423294951|ref|ZP_17273078.1| hypothetical protein HMPREF1070_01743 [Bacteroides ovatus
CL03T12C18]
gi|392674531|gb|EIY67977.1| hypothetical protein HMPREF1070_01743 [Bacteroides ovatus
CL03T12C18]
Length = 469
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 7 WNSTLKHTRGHLVELMN--SSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSA 64
+ +K G +L+N S + ++I +T NSP IHP++C + V G+TV +
Sbjct: 204 YKRLMKPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN--RG 261
Query: 65 PNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 115
PN DG DP+ C ++G+ +A+KSG + DG PS NI VR
Sbjct: 262 PNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGH- 320
Query: 116 SGVGIGREMSGRIFNVTV 133
GV IG E+SG N+ V
Sbjct: 321 GGVVIGSEISGGYRNLFV 338
>gi|298482142|ref|ZP_07000330.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271699|gb|EFI13272.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 469
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 7 WNSTLKHTRGHLVELMN--SSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSA 64
+ +K G +L+N S + ++I +T NSP IHP++C + V G+TV +
Sbjct: 204 YKRLMKPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN--RG 261
Query: 65 PNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 115
PN DG DP+ C ++G+ +A+KSG + DG PS NI VR
Sbjct: 262 PNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGH- 320
Query: 116 SGVGIGREMSGRIFNVTV 133
GV IG E+SG N+ V
Sbjct: 321 GGVVIGSEISGGYRNLFV 338
>gi|393783422|ref|ZP_10371595.1| hypothetical protein HMPREF1071_02463 [Bacteroides salyersiae
CL02T12C01]
gi|392668855|gb|EIY62348.1| hypothetical protein HMPREF1071_02463 [Bacteroides salyersiae
CL02T12C01]
Length = 468
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 66/130 (50%), Gaps = 13/130 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R L+ L + ILI ++T NSP IHP++C + V+G+ + + PN DG DP+
Sbjct: 213 RPQLINLYSCHTILI-EDVTLLNSPFWVIHPLFCESLIVRGVNIFN--RGPNGDGCDPES 269
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C ++G+ +A+KSG + DG PS NI VR GV IG E+S
Sbjct: 270 CKNVLIENCTFDTGDDCIAIKSGRNADGRKWNIPSENIIVRNCKMKNGH-GGVVIGSEIS 328
Query: 126 GRIFNVTVNH 135
G N+ V +
Sbjct: 329 GGYRNLFVEN 338
>gi|299148506|ref|ZP_07041568.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|423288903|ref|ZP_17267754.1| hypothetical protein HMPREF1069_02797 [Bacteroides ovatus
CL02T12C04]
gi|298513267|gb|EFI37154.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|392668993|gb|EIY62485.1| hypothetical protein HMPREF1069_02797 [Bacteroides ovatus
CL02T12C04]
Length = 469
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 7 WNSTLKHTRGHLVELMN--SSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSA 64
+ +K G +L+N S + ++I +T NSP IHP++C + V G+TV +
Sbjct: 204 YKRLMKPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN--RG 261
Query: 65 PNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 115
PN DG DP+ C ++G+ +A+KSG + DG PS NI VR
Sbjct: 262 PNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGH- 320
Query: 116 SGVGIGREMSGRIFNVTV 133
GV IG E+SG N+ V
Sbjct: 321 GGVVIGSEISGGYRNLFV 338
>gi|260642167|ref|ZP_05414737.2| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260623411|gb|EEX46282.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 469
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 7 WNSTLKHTRGHLVELMN--SSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSA 64
+ +K G +L+N S + ++I +T NSP IHP++C + V G+TV +
Sbjct: 204 YKRLMKPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN--RG 261
Query: 65 PNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 115
PN DG DP+ C ++G+ +A+KSG + DG PS NI VR
Sbjct: 262 PNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGH- 320
Query: 116 SGVGIGREMSGRIFNVTV 133
GV IG E+SG N+ V
Sbjct: 321 GGVVIGSEISGGYRNLFV 338
>gi|336406856|ref|ZP_08587502.1| hypothetical protein HMPREF0127_04815 [Bacteroides sp. 1_1_30]
gi|335948529|gb|EGN10233.1| hypothetical protein HMPREF0127_04815 [Bacteroides sp. 1_1_30]
Length = 469
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 7 WNSTLKHTRGHLVELMN--SSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSA 64
+ +K G +L+N S + ++I +T NSP IHP++C + V G+TV +
Sbjct: 204 YKRLMKPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN--RG 261
Query: 65 PNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 115
PN DG DP+ C ++G+ +A+KSG + DG PS NI VR
Sbjct: 262 PNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGH- 320
Query: 116 SGVGIGREMSGRIFNVTV 133
GV IG E+SG N+ V
Sbjct: 321 GGVVIGSEISGGYRNLFV 338
>gi|261880664|ref|ZP_06007091.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270332617|gb|EFA43403.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 851
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Query: 12 KHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD 71
K R LV + S ILI +L NSP IHP+ +N V G+ V + PN DG D
Sbjct: 207 KGLRSQLVNFVESDGILI-KDLHLVNSPFWVIHPLLSKNITVDGVFVQN--DGPNGDGCD 263
Query: 72 PD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGR 122
P+ C ++G+ +A+KSG ++DG +PS NI +R GV IG
Sbjct: 264 PEACDGVLIQNCTFDTGDDCIAIKSGRNNDGRLWNKPSQNIIIRNCK-MADGHGGVVIGS 322
Query: 123 EMSGRIFNV 131
E+SG NV
Sbjct: 323 EISGGCRNV 331
>gi|268317938|ref|YP_003291657.1| glycoside hydrolase [Rhodothermus marinus DSM 4252]
gi|345304218|ref|YP_004826120.1| polygalacturonase [Rhodothermus marinus SG0.5JP17-172]
gi|262335472|gb|ACY49269.1| glycoside hydrolase family 28 [Rhodothermus marinus DSM 4252]
gi|345113451|gb|AEN74283.1| Polygalacturonase [Rhodothermus marinus SG0.5JP17-172]
Length = 470
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 13/123 (10%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R + ++ N+LI +T NSP IHPV C N V+G+TV S PN DG +P
Sbjct: 218 YLRPNFIQFYRCRNVLI-EGVTIVNSPMWEIHPVLCENVTVRGVTVRS--HGPNNDGCNP 274
Query: 73 ---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
DC ++G+ +A+KSG + DG + PS+ I +R GV IG E
Sbjct: 275 ESCRYVLIEDCLFDTGDDCIAIKSGRNADGRRVNVPSAYIVIRNCK-MRDGHGGVVIGSE 333
Query: 124 MSG 126
+SG
Sbjct: 334 ISG 336
>gi|336414764|ref|ZP_08595108.1| hypothetical protein HMPREF1017_02216 [Bacteroides ovatus
3_8_47FAA]
gi|335942134|gb|EGN03982.1| hypothetical protein HMPREF1017_02216 [Bacteroides ovatus
3_8_47FAA]
Length = 469
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 7 WNSTLKHTRGHLVELMN--SSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSA 64
+ +K G +L+N S + ++I +T NSP IHP++C + V G+TV +
Sbjct: 204 YKRLMKPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN--RG 261
Query: 65 PNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 115
PN DG DP+ C ++G+ +A+KSG + DG PS NI VR
Sbjct: 262 PNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGH- 320
Query: 116 SGVGIGREMSGRIFNVTV 133
GV IG E+SG N+ V
Sbjct: 321 GGVVIGSEISGGYRNLFV 338
>gi|295086754|emb|CBK68277.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 459
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 7 WNSTLKHTRGHLVELMN--SSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSA 64
+ +K G +L+N S + ++I +T NSP IHP++C + V G+TV +
Sbjct: 194 YKRLMKPEDGMRPQLLNLHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN--RG 251
Query: 65 PNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 115
PN DG DP+ C ++G+ +A+KSG + DG PS NI VR
Sbjct: 252 PNGDGCDPESCKNVLIENCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMRNGH- 310
Query: 116 SGVGIGREMSGRIFNVTV 133
GV IG E+SG N+ V
Sbjct: 311 GGVVIGSEISGGYRNLFV 328
>gi|239628552|ref|ZP_04671583.1| glycoside hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518698|gb|EEQ58564.1| glycoside hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 695
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 13/126 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP-- 72
R + ++++ N+L+ +T SP ++PV C N V+G+ + + A N DG+DP
Sbjct: 179 RPNFIQVIGCENVLV-EGVTLLRSPMWEVNPVLCTNVTVRGIHIST--KAANNDGIDPES 235
Query: 73 -------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
D Y ++G+ +A+KSG + DG A PS NI +R + G+ IG E+S
Sbjct: 236 SNYVLIEDNYFDTGDDCIAIKSGRNADGRATNTPSQNIIIRN-NIFADGHGGITIGSEVS 294
Query: 126 GRIFNV 131
G + NV
Sbjct: 295 GGVNNV 300
>gi|330836022|ref|YP_004410663.1| Polygalacturonase [Sphaerochaeta coccoides DSM 17374]
gi|329747925|gb|AEC01281.1| Polygalacturonase [Sphaerochaeta coccoides DSM 17374]
Length = 459
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 15/125 (12%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R L+++++S+ + + +T SP T+HPV+ + + +++P APNTDG+D D
Sbjct: 161 RPPLLQILDSTRV-TVEGVTLTGSPFWTLHPVFSSGLTFRDVKIINPADAPNTDGIDIDS 219
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCS--GVGIGRE 123
C ++ G+ +A+KSG DGIA RP+ N+ RVSG T + G+ IG E
Sbjct: 220 CQDVMVTGCLVDVGDDGIALKSGSGPDGIAAGRPTRNV---RVSGCTVRSAHGGIVIGSE 276
Query: 124 MSGRI 128
+ I
Sbjct: 277 TAAGI 281
>gi|293370401|ref|ZP_06616955.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292634549|gb|EFF53084.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 525
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 7 WNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPN 66
W R L+ ++ S IL+ +TF NSPS +HP+ C + + + V +P + N
Sbjct: 230 WEDMKSWLRPVLLSIVKSKKILL-EGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQN 288
Query: 67 TDGLD---------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSG 117
D LD +C+ ++G+ + +KSG D DG P N+ VR + G
Sbjct: 289 GDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRN-NTVLHGHGG 347
Query: 118 VGIGREMSGRIFNVTVNH 135
IG EMSG + NV V+
Sbjct: 348 FVIGSEMSGGVKNVYVSE 365
>gi|442804291|ref|YP_007372440.1| endopygalactorunase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740141|gb|AGC67830.1| endopygalactorunase [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 455
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 5 LWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSA 64
L W R + + NSS + + +LT SP +H Y + +V G+ V+
Sbjct: 140 LRWAVDYDCKRPRNILIYNSSQVTL-RDLTLRRSPFWNVHICYSTDVYVSGL-VIKDNEG 197
Query: 65 PNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 115
P+TDG+D D C IE + + +K+G D DG+ + RPS NI VR S +
Sbjct: 198 PSTDGIDVDSSRNVLIENCNIECNDDNICIKAGRDADGLRVNRPSENIVVRNCS--IGSG 255
Query: 116 SGVGIGREMSGRIFNVTVNHL 136
+GV IG E SG I NV + +
Sbjct: 256 AGVTIGSETSGSIRNVEIYQI 276
>gi|257070016|ref|YP_003156271.1| endopolygalacturonase [Brachybacterium faecium DSM 4810]
gi|256560834|gb|ACU86681.1| endopolygalacturonase [Brachybacterium faecium DSM 4810]
Length = 431
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 27/148 (18%)
Query: 6 WWNS------TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
WW++ L H R L+ L + I ++ NSP+ T+HP C + + + +
Sbjct: 114 WWDTFRHRREELAHPRPTLIGLHECERV-TIRDVALRNSPAWTVHPSLCEDVTLTNLHIH 172
Query: 60 SPLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG+DP DC+I+ G+ +A+K+G + R +A V+
Sbjct: 173 NPAESPNTDGIDPESCRNVRISDCHIDVGDDCIALKAGTE-------RTPDRVATENVTI 225
Query: 111 TTPTC----SGVGIGREMSGRIFNVTVN 134
T T GV IG EMSG + NV ++
Sbjct: 226 TGCTMVRGHGGVVIGSEMSGGVRNVVIS 253
>gi|406667543|ref|ZP_11075299.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
gi|405384596|gb|EKB44039.1| Exo-poly-alpha-D-galacturonosidase precursor [Bacillus isronensis
B3W22]
Length = 448
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 13/142 (9%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W L+ L + R +LV + + + + +SPS T+HP C N + +++++P
Sbjct: 122 WKLFKEDALAYPRPNLVSFDHCERVHV-EQVKMIDSPSWTVHPNDCDNVTISAVSIVNPA 180
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
++PNTDG++P DC I+ G+ +A+KSG + + P NI + +
Sbjct: 181 NSPNTDGINPESCRNVRISDCSIDVGDDCIAIKSGTEDAERVI--PCENITITNCT-MLH 237
Query: 114 TCSGVGIGREMSGRIFNVTVNH 135
GV G EMSG I NV V++
Sbjct: 238 GHGGVVFGSEMSGDIRNVVVSN 259
>gi|160887001|ref|ZP_02068004.1| hypothetical protein BACOVA_05015 [Bacteroides ovatus ATCC 8483]
gi|293369359|ref|ZP_06615944.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|156107412|gb|EDO09157.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|292635526|gb|EFF54033.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 469
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 63/121 (52%), Gaps = 12/121 (9%)
Query: 22 MNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD-------- 73
++S + ++I +T NSP IHP++C + V G+TV + PN DG DP+
Sbjct: 221 LHSCHTILIEGVTLLNSPFWVIHPLFCESLIVSGVTVFN--RGPNGDGCDPESCKNVLIE 278
Query: 74 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 132
C ++G+ +A+KSG + DG PS NI VR GV IG E+SG N+
Sbjct: 279 NCTFDTGDDCIAIKSGRNEDGRKWNIPSENIIVRGCMMKNGH-GGVVIGSEISGGYRNLF 337
Query: 133 V 133
V
Sbjct: 338 V 338
>gi|146301992|ref|YP_001196583.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156410|gb|ABQ07264.1| Candidate polygalacturonase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 475
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 13/133 (9%)
Query: 12 KHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD 71
++ R + +E N +++ ++T NSP +HP+ N + G+TV S PN DG D
Sbjct: 219 RYLRPNFIEFF-ECNTVLVKDITVINSPFWILHPIKTNNMIIDGVTVNS--HGPNNDGCD 275
Query: 72 PD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGR 122
P+ C +G+ +A+K+G D DG +A PS NI V+ GV IG
Sbjct: 276 PEYSQNIVIKNCTFNTGDDCIAIKAGRDADGRRVAIPSKNIIVQNCK-MIDGHGGVVIGS 334
Query: 123 EMSGRIFNVTVNH 135
E+S + NV V +
Sbjct: 335 EISAGVNNVFVEN 347
>gi|182416708|ref|ZP_02948108.1| glycoside Hydrolase Family 28 [Clostridium butyricum 5521]
gi|237667049|ref|ZP_04527033.1| glycoside Hydrolase Family 28 [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182379433|gb|EDT76927.1| glycoside Hydrolase Family 28 [Clostridium butyricum 5521]
gi|237655397|gb|EEP52953.1| glycoside Hydrolase Family 28 [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 511
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 14/154 (9%)
Query: 7 WNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPN 66
+N + R ++ S NILI ++T NSP ++PV C N + +TV S L N
Sbjct: 230 FNDEISTIRPPFIQPYKSKNILI-KDITILNSPFWEVNPVLCENIKIDSITVDSHLY--N 286
Query: 67 TDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSG 117
DG+DP DC+ +G+ +A+KSG +++G + PS NI +R + G
Sbjct: 287 NDGVDPESCKDMIIEDCHFTTGDDCIAIKSGRNNEGRNIGVPSQNIIIRN-NKFEDGHGG 345
Query: 118 VGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLR 151
+ IG E+SG + N H + + + Y R +
Sbjct: 346 ITIGSEISGGV-NDIFAHDNYFDSSELDYPIRFK 378
>gi|430827435|ref|ZP_19445578.1| polygalacturonase [Enterococcus faecium E0164]
gi|430444043|gb|ELA53955.1| polygalacturonase [Enterococcus faecium E0164]
Length = 445
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 27/149 (18%)
Query: 6 WWNS------TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
WW++ L + R L+ N I + ++ SPS TI+P+ C N +T+L
Sbjct: 113 WWHTFRNEPDNLAYPRPKLMSFHNCHRI-TVKDIKLIQSPSWTINPILCSNATFDNLTIL 171
Query: 60 SPLSAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG+DP+ +I+ G+ +A+K+G + IA ++
Sbjct: 172 NPADSPNTDGIDPESCKNVRISNYHIDVGDDCIAIKAGTED-------TYERIACENITI 224
Query: 111 TTPTC----SGVGIGREMSGRIFNVTVNH 135
T T GV +G EMSG I N+T+++
Sbjct: 225 TNCTMVHGHGGVVLGSEMSGSIRNITISN 253
>gi|240144096|ref|ZP_04742697.1| putative polygalacturonase [Roseburia intestinalis L1-82]
gi|257203884|gb|EEV02169.1| putative polygalacturonase [Roseburia intestinalis L1-82]
gi|291536249|emb|CBL09361.1| Endopolygalacturonase [Roseburia intestinalis M50/1]
Length = 518
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 14/151 (9%)
Query: 6 WWNS---TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WW + + R L L + N+ + +TF NSPS T+HP + N G+T+ +P
Sbjct: 210 WWKNPKVMVGAFRPRLFFLSHCQNV-TLCGVTFKNSPSWTLHPYFSDNLKFYGLTINNPS 268
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDGLDP+ G+ +AVKSG + G PS NI +R+
Sbjct: 269 DSPNTDGLDPESCKNVDIVGVKFSLGDDCIAVKSGKIYMGKKYRTPSENIHIRQCLMENG 328
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG 144
V +G EM+G + N+ V + +G
Sbjct: 329 H-GAVTVGSEMAGGVKNLVVEECRFYDTDRG 358
>gi|374983540|ref|YP_004959035.1| glycoside hydrolase family protein [Streptomyces bingchenggensis
BCW-1]
gi|297154192|gb|ADI03904.1| glycoside hydrolase family 28 [Streptomyces bingchenggensis BCW-1]
Length = 475
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 70/137 (51%), Gaps = 17/137 (12%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R +V+ N+L+ S LT + P T+HPV N V+ +TV S L NTDG DP
Sbjct: 215 YLRPKMVQFYRCRNVLV-SGLTIVDPPMWTVHPVLSTNVTVRDITVDSTLY--NTDGCDP 271
Query: 73 DC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVR--RVSGTTPTCSGVGIG 121
+C + + VAVKSG D DG + PS NI VR R SG G+ +G
Sbjct: 272 ECCSDVLITGCRFNTNDDCVAVKSGRDEDGHRVGVPSRNIVVRDCRFSG---RWGGMTVG 328
Query: 122 REMSGRIFNVTVNHLDV 138
EMSG + ++ + ++
Sbjct: 329 SEMSGGVRDIFAENCEI 345
>gi|109509140|gb|ABG34279.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
Length = 201
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 76/167 (45%), Gaps = 39/167 (23%)
Query: 89 WDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG---- 144
WD GI+ RPS+NI +R + + +G+ IG EMSG + NVTV +L VW ++
Sbjct: 1 WDEYGISYKRPSTNILIRNLVVRSMVSAGISIGSEMSGGVSNVTVENLPVWDSRRAVRIK 60
Query: 145 ------------SYKD------------RLRLYGHPKEGWDPKAIPKISGISFVNVVSVN 180
+Y++ + HP EG+D KA P + ISF+ V
Sbjct: 61 TAPGRGGYVQDITYRNITFENVRVGIVIKTDYNEHPDEGYDRKAFPILQRISFIGVHG-Q 119
Query: 181 TTKAPVLAGIIGTQFEEICMKNVSL------LVQAPSVKWQCRFVSG 221
+ PV I G+ EEI ++NV+ L +QC FV G
Sbjct: 120 GVRVPVR--IHGS--EEIPVRNVTFQDMSVGLTYKKKHIFQCAFVQG 162
>gi|291538883|emb|CBL11994.1| Endopolygalacturonase [Roseburia intestinalis XB6B4]
Length = 518
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 14/151 (9%)
Query: 6 WWNS---TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WW + + R L L + N+ + +TF NSPS T+HP + N G+T+ +P
Sbjct: 210 WWKNPKVMVGAFRPRLFFLSHCQNV-TLCGVTFKNSPSWTLHPYFSDNLKFYGLTINNPS 268
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDGLDP+ G+ +AVKSG + G PS NI +R+
Sbjct: 269 DSPNTDGLDPESCKNVDIVGVKFSLGDDCIAVKSGKIYMGKKYRTPSENIHIRQCLMENG 328
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG 144
V +G EM+G + N+ V + +G
Sbjct: 329 H-GAVTVGSEMAGGVKNLVVEECRFYDTDRG 358
>gi|448621831|ref|ZP_21668580.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax
denitrificans ATCC 35960]
gi|445754861|gb|EMA06255.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax
denitrificans ATCC 35960]
Length = 512
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 99/235 (42%), Gaps = 41/235 (17%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD--- 71
R L+++ N+ +S +T NSP H VY + V +++ +P APN DG+D
Sbjct: 147 RPPLLQIDGCENV-TVSGVTLRNSPFWNTHVVYSEDVTVHDVSIQNPPDAPNGDGIDIDS 205
Query: 72 ------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
D +I++G+ + +KSG D +G + RP+ N+ V + GV IG E +
Sbjct: 206 SRFVRVSDTHIDAGDDAICLKSGKDEEGREVGRPTENVVVTNCT-VEHGHGGVVIGSETA 264
Query: 126 GRIFNVTVNHLDVWMQQQG----SYKDR------LRL----------------YGHPKEG 159
G + +VTV + +G S + R LR Y
Sbjct: 265 GDVRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIVMRRVACPFVINGYYQTDID 324
Query: 160 WDP----KAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLVQAP 210
DP +A P + + F ++ + A LAG+ +FE I +V + P
Sbjct: 325 SDPEPVTEATPNVRNVDFHHITAEEVESAAFLAGLPERRFEGISFTDVDIDATRP 379
>gi|302872741|ref|YP_003841377.1| polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
gi|302575600|gb|ADL43391.1| Polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
Length = 447
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 13/142 (9%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W L + LK+ R + +N+ I + NSPS T++P+ C+N V + + +P
Sbjct: 117 WRLHRDKELKYPRPRSICFYRCNNVTI-EGIKIVNSPSWTVNPIECQNVTVHNVKIQNPY 175
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG++P+ CYI+ G+ V +KSG + P NI +
Sbjct: 176 DSPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTED--CKERIPCENITITNCI-MAH 232
Query: 114 TCSGVGIGREMSGRIFNVTVNH 135
GV IG EMSG + NV +++
Sbjct: 233 GHGGVVIGSEMSGGVRNVVISN 254
>gi|224536550|ref|ZP_03677089.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521806|gb|EEF90911.1| hypothetical protein BACCELL_01425 [Bacteroides cellulosilyticus
DSM 14838]
Length = 462
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 13/141 (9%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R +E +N+ I +T +SP IHP++C N V+ +TV S N DG DP+
Sbjct: 199 RPGFIEPFGCANVRI-EGVTIMDSPFWVIHPIFCNNVIVRNVTVDS--HNYNNDGCDPES 255
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C +G+ +A+KSG D+D + +P+ N+ +R S + +GV IG E++
Sbjct: 256 CRNVLIEGCTFSTGDDAIAIKSGRDNDAWRIGQPTENVVIRNCSFRSKI-NGVCIGSEIA 314
Query: 126 GRIFNVTVNHLDVWMQQQGSY 146
G + N+ + ++ + Y
Sbjct: 315 GGVRNIFIENITIPKSSNAIY 335
>gi|427384860|ref|ZP_18881365.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
gi|425728121|gb|EKU90980.1| hypothetical protein HMPREF9447_02398 [Bacteroides oleiciplenus YIT
12058]
Length = 462
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 13/141 (9%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R +E +N+ I +T +SP IHP++C N V+ +TV S N DG DP+
Sbjct: 199 RPGFIEPFGCANVRI-EGVTIIDSPFWVIHPIFCSNVIVRNVTVDS--HNYNNDGCDPES 255
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C +G+ +A+KSG D+D + +P+ N+ +R S + +GV IG E++
Sbjct: 256 CRNVLIEGCTFSTGDDAIAIKSGRDNDAWRIGQPTENVVIRNCSFRS-KINGVCIGSEIA 314
Query: 126 GRIFNVTVNHLDVWMQQQGSY 146
G + N+ + ++ + Y
Sbjct: 315 GGVRNIFIENITIPKSSNAIY 335
>gi|403252174|ref|ZP_10918484.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
gi|402812187|gb|EJX26666.1| exo-poly-alpha-D-galacturonosidase [Thermotoga sp. EMP]
Length = 446
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 24/184 (13%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R V+ N+L+ + NSP +HPV N ++ + + S + PN DG+DP
Sbjct: 185 YLRPSFVQFYRCRNVLV-EGVKIINSPMWCVHPVLSENVIIRNIEISS--TGPNNDGIDP 241
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR-RVSGTTPTCSGVGIGR 122
+ C ++G+ V +KSG D DG + PS I VR + + + G+ IG
Sbjct: 242 ESCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGS 301
Query: 123 EMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTT 182
EMSG + NV + +V+M + + LRL + + G + I F++ V++N +
Sbjct: 302 EMSGGVRNVVARN-NVYMNVERA----LRLKTNSRRGG------YMENIFFIDNVAMNVS 350
Query: 183 KAPV 186
+ +
Sbjct: 351 EEVI 354
>gi|326799707|ref|YP_004317526.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326550471|gb|ADZ78856.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 517
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 12/130 (9%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R ++ M N+ I +T NSP T++P +C N + G+T+ +P S PNTDG++P+
Sbjct: 179 RPPFIQPMYCKNVRI-DGITIKNSPFWTVNPEFCDNVTIDGVTINNPPS-PNTDGINPES 236
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C+I G+ + +KSG D G ARP+ N + + + GV IG EMS
Sbjct: 237 CSNVHISNCHISVGDDCITIKSGKDRSGRKEARPAENYTITNCTMLS-GHGGVVIGSEMS 295
Query: 126 GRIFNVTVNH 135
G + + +++
Sbjct: 296 GDVKKIVISN 305
>gi|194015552|ref|ZP_03054168.1| glycoside hydrolase [Bacillus pumilus ATCC 7061]
gi|194012956|gb|EDW22522.1| glycoside hydrolase [Bacillus pumilus ATCC 7061]
Length = 463
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 59/108 (54%), Gaps = 12/108 (11%)
Query: 28 LIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP---------DCYIES 78
++I +T +SP IHPV V+G+ ++ PNTDG++P DCY ++
Sbjct: 224 VLIEGVTVKDSPMWQIHPVLSELVIVRGVHIIG--HGPNTDGVNPESCRNVLIEDCYFDN 281
Query: 79 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSG 126
G+ +A+KSG + DG + PS NI +RR + GV IG E+SG
Sbjct: 282 GDDCIAIKSGRNEDGRRIGIPSENIVIRR-NEMRDGHGGVTIGSEISG 328
>gi|300728229|ref|ZP_07061597.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299774464|gb|EFI71088.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 856
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 63/126 (50%), Gaps = 13/126 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC 74
R L+ + S NILI ++T SP IHP+ C+N V G+ + + PN DG DP+
Sbjct: 211 RPQLINFVRSENILI-KDVTLLRSPFWVIHPLLCKNITVDGVQIWN--EGPNGDGCDPEA 267
Query: 75 ---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
+G+ +A+KSG ++DG +PS NI +R GV IG E+S
Sbjct: 268 CENVIIQNTLFHTGDDCIAIKSGRNNDGRFWGKPSKNIIIRNCK-MEDGHGGVVIGSEIS 326
Query: 126 GRIFNV 131
G NV
Sbjct: 327 GGCENV 332
>gi|299148436|ref|ZP_07041498.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|298513197|gb|EFI37084.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 518
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 7 WNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPN 66
W R L+ ++ S IL+ +TF NSPS +HP+ C + + + V +P + N
Sbjct: 223 WEDMKSWLRPVLLSIVKSKKILL-EGVTFKNSPSWCLHPLSCESLTLNDVKVFNPWYSQN 281
Query: 67 TDGLD---------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSG 117
D LD +C+ ++G+ + +KSG D DG P NI VR + G
Sbjct: 282 GDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENIIVRN-NTVLHGHGG 340
Query: 118 VGIGREMSGRIFNVTVNH 135
IG EMSG + NV V+
Sbjct: 341 FVIGSEMSGGVKNVYVSE 358
>gi|448567657|ref|ZP_21637582.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax prahovense
DSM 18310]
gi|445711655|gb|ELZ63445.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax prahovense
DSM 18310]
Length = 549
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 98/235 (41%), Gaps = 41/235 (17%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD--- 71
R L+++ N+ +S +T NSP H VY + + +++ +P APN DG+D
Sbjct: 191 RPPLLQIDGCENV-TVSGVTLRNSPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDS 249
Query: 72 ------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
D +I++G+ + +KSG D G + RP+ N+ V + GV IG E +
Sbjct: 250 SRFVRVSDTHIDAGDDAICLKSGKDEQGREVGRPTENVVVTNCT-VEHGHGGVVIGSETA 308
Query: 126 GRIFNVTVNHLDVWMQQQG----SYKDR------LRL----------------YGHPKEG 159
G + +VTV + +G S + R LR Y
Sbjct: 309 GDVRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIIMRRVACPFVINGYYQTDID 368
Query: 160 WDPK----AIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLVQAP 210
DPK A P + + F ++ + A LAG+ +FE I +V + P
Sbjct: 369 SDPKPVTEATPNVRNVDFHHITAEEVESAAFLAGLPEQRFEGISFTDVDIDATRP 423
>gi|160886912|ref|ZP_02067915.1| hypothetical protein BACOVA_04926 [Bacteroides ovatus ATCC 8483]
gi|156107323|gb|EDO09068.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 518
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 7 WNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPN 66
W R L+ ++ S +L+ +TF NSPS +HP+ C + + + V +P + N
Sbjct: 223 WEEMKSWLRPVLLSIVKSKKVLL-EGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQN 281
Query: 67 TDGLD---------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSG 117
D LD +C+ ++G+ + +KSG D DG P N+ VR + G
Sbjct: 282 GDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRN-NTVLHGHGG 340
Query: 118 VGIGREMSGRIFNVTVNH 135
IG EMSG + NV V+
Sbjct: 341 FVIGSEMSGGVKNVYVSE 358
>gi|336415491|ref|ZP_08595830.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
gi|335940370|gb|EGN02237.1| hypothetical protein HMPREF1017_02938 [Bacteroides ovatus
3_8_47FAA]
Length = 524
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 7 WNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPN 66
W R L+ ++ S IL+ +TF NSPS +HP+ C + + + V +P + N
Sbjct: 229 WEDMKSWLRPVLLSIVKSKKILL-EGVTFKNSPSWCLHPLSCESLTLNDVKVFNPWYSQN 287
Query: 67 TDGLD---------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSG 117
D LD +C+ ++G+ + +KSG D DG P NI VR + G
Sbjct: 288 GDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENIIVRN-NTVLHGHGG 346
Query: 118 VGIGREMSGRIFNVTVNH 135
IG EMSG + NV V+
Sbjct: 347 FVIGSEMSGGVKNVYVSE 364
>gi|376338082|gb|AFB33586.1| hypothetical protein 2_7803_01, partial [Pinus cembra]
Length = 138
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 63/141 (44%), Gaps = 34/141 (24%)
Query: 87 SGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSY 146
SGWD GI RPSSNI +RRV G T T SG+ +G EMSG I V L ++ ++G
Sbjct: 1 SGWDEYGITYGRPSSNIIIRRVIGQTHTSSGLALGSEMSGGIQGVHAQDLQIFNSRRGL- 59
Query: 147 KDRLR------------------------------LYG-HPKEGWDPKAIPKISGISFVN 175
R++ LYG HP + +DP A+ I I+F +
Sbjct: 60 --RIKTAPGRGGYVRDVYISNVTMKNVSVGIVFTGLYGDHPDDRYDPNALXDIQRITFKD 117
Query: 176 VVSVNTTKAPVLAGIIGTQFE 196
++ A + GI F+
Sbjct: 118 IIGDEIKTAGSVXGIQNAPFK 138
>gi|358066336|ref|ZP_09152863.1| hypothetical protein HMPREF9473_04926 [Clostridium hathewayi
WAL-18680]
gi|356695387|gb|EHI57019.1| hypothetical protein HMPREF9473_04926 [Clostridium hathewayi
WAL-18680]
Length = 539
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 13/139 (9%)
Query: 6 WWNSTLKHT--RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
W+N+ ++ R ++ +N +++ + NSPS IHP + + +TVL+P
Sbjct: 232 WYNAKVRRIAFRPRMI-FLNHCEHVVVQGIRVQNSPSWNIHPYFSNHLRFLDLTVLNPKD 290
Query: 64 APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+PNTDGLDP+ Y G+ +A+KSG + G PS +I +R+
Sbjct: 291 SPNTDGLDPESCKDVEIAGVYFSLGDDCIAIKSGKIYMGAKYRVPSEDIVIRQCCMRDGH 350
Query: 115 CSGVGIGREMSGRIFNVTV 133
S + IG EM+G + ++TV
Sbjct: 351 GS-ITIGSEMAGGVKHLTV 368
>gi|292494258|ref|YP_003533401.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|448289466|ref|ZP_21480637.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|291369174|gb|ADE01404.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
gi|445582547|gb|ELY36888.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax volcanii
DS2]
Length = 549
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 98/235 (41%), Gaps = 41/235 (17%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD--- 71
R L+++ N+ +S +T NSP H VY + + +++ +P APN DG+D
Sbjct: 191 RPPLLQIDGCENV-TVSGVTLRNSPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDS 249
Query: 72 ------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
D +I++G+ + +KSG D G + RP+ N+ V + GV IG E +
Sbjct: 250 SRFVRVSDTHIDAGDDAICLKSGKDEQGREVGRPTENVVVTNCT-VEHGHGGVVIGSETA 308
Query: 126 GRIFNVTVNHLDVWMQQQG----SYKDR------LRL----------------YGHPKEG 159
G + +VTV + +G S + R LR Y
Sbjct: 309 GDVRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIIMRRVACPFVINGYYQTDID 368
Query: 160 WDPK----AIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLVQAP 210
DPK A P + + F ++ + A LAG+ +FE I +V + P
Sbjct: 369 SDPKPVTEATPNVRNVDFHHITAEEVESAAFLAGLPEQRFEGISFTDVDIDATRP 423
>gi|237717974|ref|ZP_04548455.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229452776|gb|EEO58567.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 524
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 7 WNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPN 66
W R L+ ++ S +L+ +TF NSPS +HP+ C + + + V +P + N
Sbjct: 229 WEEMKSWLRPVLLSIVKSKKVLL-EGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQN 287
Query: 67 TDGLD---------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSG 117
D LD +C+ ++G+ + +KSG D DG P N+ VR + G
Sbjct: 288 GDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRN-NTVLHGHGG 346
Query: 118 VGIGREMSGRIFNVTVNH 135
IG EMSG + NV V+
Sbjct: 347 FVIGSEMSGGVKNVYVSE 364
>gi|423214932|ref|ZP_17201460.1| hypothetical protein HMPREF1074_02992 [Bacteroides xylanisolvens
CL03T12C04]
gi|392692195|gb|EIY85433.1| hypothetical protein HMPREF1074_02992 [Bacteroides xylanisolvens
CL03T12C04]
Length = 472
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 12/126 (9%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYIESGN 80
I +T +SP IHP++C N V+ +TV S N DG DP+ C +G+
Sbjct: 223 IEGITIKDSPFWVIHPIFCNNVIVRDVTVDS--HNRNNDGCDPESCSNVLIEGCTFSTGD 280
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNHLDVWM 140
+A+KSG D+D + +P+ N+ +R + + +GV IG E+SG + NV + ++ +
Sbjct: 281 DAIAIKSGRDNDAWRIGQPTENVVIRNCTFWS-KINGVCIGSEISGGVRNVFIENISILK 339
Query: 141 QQQGSY 146
Y
Sbjct: 340 SSNAIY 345
>gi|423288978|ref|ZP_17267829.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|423294865|ref|ZP_17272992.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
gi|392668742|gb|EIY62236.1| hypothetical protein HMPREF1069_02872 [Bacteroides ovatus
CL02T12C04]
gi|392676056|gb|EIY69497.1| hypothetical protein HMPREF1070_01657 [Bacteroides ovatus
CL03T12C18]
Length = 524
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 7 WNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPN 66
W R L+ ++ S +L+ +TF NSPS +HP+ C + + + V +P + N
Sbjct: 229 WEEMKSWLRPVLLSIVKSKKVLL-EGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQN 287
Query: 67 TDGLD---------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSG 117
D LD +C+ ++G+ + +KSG D DG P N+ VR + G
Sbjct: 288 GDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRN-NTVLHGHGG 346
Query: 118 VGIGREMSGRIFNVTVNH 135
IG EMSG + NV V+
Sbjct: 347 FVIGSEMSGGVKNVYVSE 364
>gi|383114359|ref|ZP_09935123.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
gi|313693935|gb|EFS30770.1| hypothetical protein BSGG_1470 [Bacteroides sp. D2]
Length = 524
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 7 WNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPN 66
W R L+ ++ S +L+ +TF NSPS +HP+ C + + + V +P + N
Sbjct: 229 WEEMKSWLRPVLLSIVKSKKVLL-EGVTFKNSPSWCLHPLSCESLILNDVKVFNPWYSQN 287
Query: 67 TDGLD---------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSG 117
D LD +C+ ++G+ + +KSG D DG P N+ VR + G
Sbjct: 288 GDALDVESCKNVLIANCFFDAGDDAICLKSGKDEDGRRRGEPCENVIVRN-NTVLHGHGG 346
Query: 118 VGIGREMSGRIFNVTVNH 135
IG EMSG + NV V+
Sbjct: 347 FVIGSEMSGGVKNVYVSE 364
>gi|325106423|ref|YP_004276077.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975271|gb|ADY54255.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 482
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 13/133 (9%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R ++ S N+LI +++ N+P I+PV C N V+ + V++ PN DG DP
Sbjct: 216 YLRPPFIQPYLSKNVLI-ADVKIINAPFWNINPVLCENVTVRNVKVVT--HGPNNDGCDP 272
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+ CY ++G+ +A+KSG + DG +ARP+ N + GV IG E
Sbjct: 273 ESCKNVLITGCYFDTGDDCIAIKSGRNEDGRNIARPAENHIIENCE-MKDGHGGVVIGSE 331
Query: 124 MSGRIFNVTVNHL 136
+SG N+ +L
Sbjct: 332 ISGGARNIFAQNL 344
>gi|219814394|gb|ACL36472.1| pectinase [uncultured bacterium]
Length = 436
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 12/113 (10%)
Query: 28 LIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYIES 78
++I + NSP +HPV C N V G+ V+ PNTDG++P+ C+ +S
Sbjct: 194 ILIQGVPVLNSPMWQVHPVLCENVTVDGIKVIG--HGPNTDGVNPESCKNVVIKGCHFDS 251
Query: 79 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 131
G+ +AVKSG + D + PS NI + + GV IG E+SG + NV
Sbjct: 252 GDDCIAVKSGRNADARRINMPSENIVIEH-NEMKDGHGGVTIGSEISGGVKNV 303
>gi|167762022|ref|ZP_02434149.1| hypothetical protein BACSTE_00368 [Bacteroides stercoris ATCC
43183]
gi|167700114|gb|EDS16693.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 516
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 11/144 (7%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
++ + W S R +V L+ N+ + + F NSP+ +HP+ C N V+ + V +
Sbjct: 223 LKTEEEWQSVRHFLRPVMVSLIECKNVWL-QGVIFQNSPAWNLHPLMCENVLVEDVQVRN 281
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P A N DGLD + + G+ + +KSG D DG ARP N+ V +
Sbjct: 282 PSYAQNGDGLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGCT-V 340
Query: 112 TPTCSGVGIGREMSGRIFNVTVNH 135
G +G EMSG + NV+V++
Sbjct: 341 FKGHGGFVVGSEMSGGVRNVSVSN 364
>gi|409099480|ref|ZP_11219504.1| glycoside hydrolase family protein [Pedobacter agri PB92]
Length = 530
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 12/130 (9%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP-- 72
R ++ M N+LI +T NSP T++P + N + +T+ +P S PNTDG++P
Sbjct: 187 RPPFIQTMFCKNVLI-DGITIRNSPFWTVNPEFSENVKIHAVTINNPHS-PNTDGINPES 244
Query: 73 -------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
DC+I G+ + +KSG D G MA P+ N + + GV IG EMS
Sbjct: 245 CKNVHISDCHISVGDDCITIKSGKDEPGRRMAIPAENYVITNCT-MLSGHGGVVIGSEMS 303
Query: 126 GRIFNVTVNH 135
G + +T+++
Sbjct: 304 GDVRKITISN 313
>gi|448540079|ref|ZP_21623316.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-646]
gi|448552184|ref|ZP_21629848.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-645]
gi|448553851|ref|ZP_21630729.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-644]
gi|445709350|gb|ELZ61181.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-645]
gi|445709953|gb|ELZ61776.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-646]
gi|445719854|gb|ELZ71532.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp. ATCC
BAA-644]
Length = 516
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 41/235 (17%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD--- 71
R L+++ N+ +S +T NSP H VY + + +++ +P APN DG+D
Sbjct: 154 RPPLLQIDGCENV-TVSGVTLRNSPFWNTHVVYSDDVTIHDVSIRNPPDAPNGDGIDIDS 212
Query: 72 ------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
D +I++G+ + +KSG D +G + RP+ N+ V + GV IG E +
Sbjct: 213 SRFVRVSDTHIDAGDDAICLKSGKDEEGREVGRPTENVVVTNCT-VEHGHGGVVIGSETA 271
Query: 126 GRIFNVTVNHLDVWMQQQG----SYKDR------LRL----------------YGHPKEG 159
G + +VTV + +G S + R LR Y
Sbjct: 272 GDVRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIVMRRVACPFVINGYYQTDID 331
Query: 160 WDP----KAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLVQAP 210
DP +A P + + F ++ + A LAG+ +FE I +V + P
Sbjct: 332 SDPEPVTEATPNVRNVDFHHITAEEVESAAFLAGLPEQRFEGISFTDVDIDATRP 386
>gi|375309358|ref|ZP_09774639.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. Aloe-11]
gi|375078667|gb|EHS56894.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus sp. Aloe-11]
Length = 504
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 27/149 (18%)
Query: 6 WWN------STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
WW L++ R L+ + I ++ NSPS TI+P+ C N + +++L
Sbjct: 168 WWEKHRNHPEELQYPRPKLISFDRCQRV-TIKDIMLKNSPSWTINPIACYNVTIDNLSIL 226
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG++P+ C I+ G+ +A+K+G + IA ++
Sbjct: 227 NPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTEDT-------QERIACENITI 279
Query: 111 TTPTC----SGVGIGREMSGRIFNVTVNH 135
T T GV +G EMSG I NVT+++
Sbjct: 280 TNCTMVHGHGGVVLGSEMSGDIRNVTISN 308
>gi|329956221|ref|ZP_08296901.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328524695|gb|EGF51756.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 506
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 11/138 (7%)
Query: 7 WNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPN 66
W S R +V L+ N+ + + F NSP+ +HP+ C N V+ + V +P A N
Sbjct: 219 WQSVRHFLRPVMVSLIECKNVWL-QGVIFQNSPAWNLHPLMCENVLVEDVQVRNPSYAQN 277
Query: 67 TDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSG 117
DGLD + + G+ + +KSG D DG ARP N+ V + G
Sbjct: 278 GDGLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGCT-VFKGHGG 336
Query: 118 VGIGREMSGRIFNVTVNH 135
+G EMSG + NV+V++
Sbjct: 337 FVVGSEMSGGVRNVSVSN 354
>gi|150388731|ref|YP_001318780.1| glycoside hydrolase [Alkaliphilus metalliredigens QYMF]
gi|149948593|gb|ABR47121.1| glycoside hydrolase, family 28 [Alkaliphilus metalliredigens QYMF]
Length = 519
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 73/142 (51%), Gaps = 14/142 (9%)
Query: 3 WDLWWNSTLKHT---RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
+D WW K R L+ + N +ILI +T NSPS TIHP++ +N + + V+
Sbjct: 208 FDNWWKDAKKKRVAWRPRLIFIKNCRDILI-EEVTVQNSPSWTIHPMFSQNLQLINLKVI 266
Query: 60 SPLSAPNTDGLDPD-CY--------IESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG++P+ C G+ +A+KSG + G + S +I +R
Sbjct: 267 NPKDSPNTDGINPESCQNVKIIGVDFSVGDDCIAIKSGKLYLGQRLKIASQDIMIRNCH- 325
Query: 111 TTPTCSGVGIGREMSGRIFNVT 132
G+ IG EM+G + NV+
Sbjct: 326 MKFGHGGIVIGSEMAGGVKNVS 347
>gi|224537997|ref|ZP_03678536.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520403|gb|EEF89508.1| hypothetical protein BACCELL_02886 [Bacteroides cellulosilyticus
DSM 14838]
Length = 452
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 64/118 (54%), Gaps = 17/118 (14%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP---------DCYIESGN 80
I + NSP T++P +C N VKG+T+ + + +PNTDG++P DC+I G+
Sbjct: 207 IEGVKIVNSPFWTVNPEFCENVKVKGVTIHN-VPSPNTDGINPESCRNVHISDCHISVGD 265
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGREMSGRIFNVTVNH 135
+ +KSG D G + P NI + +SG GV IG EMSG + VT+++
Sbjct: 266 DCITIKSGRDAQGRRLGVPCENITITNCIMLSGH----GGVVIGSEMSGGVRKVTISN 319
>gi|90020600|ref|YP_526427.1| glycoside hydrolase family protein [Saccharophagus degradans 2-40]
gi|89950200|gb|ABD80215.1| polygalacturonase-like protein [Saccharophagus degradans 2-40]
Length = 463
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 67/128 (52%), Gaps = 13/128 (10%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R V+ N+LI ++T N+P +HP +N V+G+ + S PN+DG DP
Sbjct: 211 YLRPSFVQPYKCENVLI-EDITIINAPFWLLHPTLSQNVTVRGVHLES--LGPNSDGCDP 267
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+ C+ +G+ +A+KSG ++DG +A P+ N+ +R GV IG E
Sbjct: 268 ESCKNVVIENCFFNTGDDCIAIKSGRNNDGRRLATPTENVIIRNCK-MEAGHGGVVIGSE 326
Query: 124 MSGRIFNV 131
+SG + NV
Sbjct: 327 ISGGVRNV 334
>gi|393786391|ref|ZP_10374527.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
gi|392660020|gb|EIY53637.1| hypothetical protein HMPREF1068_00807 [Bacteroides nordii
CL02T12C05]
Length = 509
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 7 WNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPN 66
W S R +V L+ N+ + F NSP+ +HP+ C N ++ + V +P A N
Sbjct: 218 WQSVRHFLRPVMVSLIECKNVWF-QGVIFQNSPAWNLHPLMCENVLIEDIQVRNPSYAQN 276
Query: 67 TDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSG 117
DGLD + + G+ + +KSG D DG ARP N+ V + G
Sbjct: 277 GDGLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVVVDGCT-VFKGHGG 335
Query: 118 VGIGREMSGRIFNVTVNH 135
+G EMSG + NV+V++
Sbjct: 336 FVVGSEMSGGVRNVSVSN 353
>gi|451820152|ref|YP_007456353.1| endopolygalacturonase [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451786131|gb|AGF57099.1| endopolygalacturonase [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 506
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 83/160 (51%), Gaps = 14/160 (8%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+R + ++ + R ++ ++NILI ++T NSP ++PV C N V G+ + +
Sbjct: 224 VRNERIFSDDISTIRPPFIQPYKTNNILI-RDITILNSPFWEVNPVLCENIKVSGIRIDT 282
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
L N DG+DP+ CY +G+ +A+KSG +++G + P+SNI +R +
Sbjct: 283 NLY--NNDGVDPESCKDMIIENCYFLTGDDCIAIKSGRNNEGRNIGIPTSNIIIRN-NEF 339
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLR 151
G+ IG E+SG + N+ H + + ++ Y R +
Sbjct: 340 KDGHGGITIGSEISGGVNNI-FGHDNYFDSEELDYPIRFK 378
>gi|375100883|ref|ZP_09747146.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661615|gb|EHR61493.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 460
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
H R ++++ ++ +L+ ++ T NSP H VY + V+G+TV S PN DG+D
Sbjct: 206 HLRPSMIQIFDAERVLL-ADYTVRNSPFWINHLVYTDDAVVRGLTVDS--HNPNNDGVDV 262
Query: 73 DCYIE---------SGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
D + +G+ V VKSG D DG + RPS N+ VR G+ +G E
Sbjct: 263 DSSTDVLIEHNTFRTGDDSVVVKSGRDKDGRDIGRPSRNVVVRH--NDMGGEDGIALGSE 320
Query: 124 MSGRIFNV 131
MSG I +V
Sbjct: 321 MSGGISHV 328
>gi|160892048|ref|ZP_02073051.1| hypothetical protein BACUNI_04508 [Bacteroides uniformis ATCC 8492]
gi|156858526|gb|EDO51957.1| polygalacturonase (pectinase) [Bacteroides uniformis ATCC 8492]
Length = 471
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 13/133 (9%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD--- 71
R HL+ L N+L+ SP TIH C+ G V+G+ V + + N DG+D
Sbjct: 206 RPHLIHLNRCRNVLL-DGFKIRESPFWTIHLYMCKGGIVRGLDVKA--NGHNNDGIDLEM 262
Query: 72 ------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
+C + G+ V +KSG + D + P NI VR + +GIG E+S
Sbjct: 263 SRNFLIENCKFDQGDDAVVIKSGRNRDAWRLGTPCENIVVRNCQ-VMEGHTLLGIGSELS 321
Query: 126 GRIFNVTVNHLDV 138
G + NV ++H DV
Sbjct: 322 GGVRNVYMHHCDV 334
>gi|150004702|ref|YP_001299446.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149933126|gb|ABR39824.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 471
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 13/133 (9%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD--- 71
R HL+ L N+L+ SP TIH C+ G V+G+ V + + N DG+D
Sbjct: 206 RPHLIHLNRCRNVLL-DGFKIRESPFWTIHLYMCKGGIVRGLDVKA--NGHNNDGIDLEM 262
Query: 72 ------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
+C + G+ V +KSG + D + P NI VR + +GIG E+S
Sbjct: 263 SRNFLIENCKFDQGDDAVVIKSGRNRDAWRLGTPCENIVVRNCQ-VMEGHTLLGIGSELS 321
Query: 126 GRIFNVTVNHLDV 138
G + NV ++H DV
Sbjct: 322 GGVRNVYMHHCDV 334
>gi|326797905|ref|YP_004315724.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548669|gb|ADZ77054.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 485
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 13/128 (10%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R + ++ N+ I +++ NSP ++PV C N ++ + V+S PN DG DP
Sbjct: 228 YLRPNFIQPYQCKNVWI-ADVKLINSPMWNLNPVLCENVLIEKVKVIS--HGPNNDGCDP 284
Query: 73 ---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
DCY ++G+ +A+KSG D DG + RP+ N + GV IG E
Sbjct: 285 EACKNVWIRDCYFDTGDDCIAIKSGRDEDGRNIGRPAENHIIENCV-MKDGHGGVVIGSE 343
Query: 124 MSGRIFNV 131
++G N+
Sbjct: 344 IAGGAKNI 351
>gi|325568850|ref|ZP_08145143.1| hypothetical protein HMPREF9087_1432 [Enterococcus casseliflavus
ATCC 12755]
gi|325157888|gb|EGC70044.1| hypothetical protein HMPREF9087_1432 [Enterococcus casseliflavus
ATCC 12755]
Length = 537
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 35/218 (16%)
Query: 12 KHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD 71
+ RG L+ +M + NI + + LT + P T+H +YC G+T+ S N DG D
Sbjct: 260 RRVRGRLICMMQAKNIHL-TELTLIDPPCWTVHMIYCDTVVTHGVTIQSK-GIDNGDGWD 317
Query: 72 PD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGR 122
PD ++G+ +A+KSG + +G + RP+ NI R G+ IG
Sbjct: 318 PDSSQNLLIFDTVFDTGDDCIAIKSGKNPEGNQINRPAKNI--RLFDLAIRGGHGIAIGS 375
Query: 123 EMSGRIFNV---------TVNHLDVWMQ-QQGSYKDRL--------RLYGHP----KEGW 160
E SG + N+ T+ L++ Q +G Y ++ R HP +G
Sbjct: 376 EQSGGVENIAFRDCQLTNTLYGLELKAQNDRGGYIRQVTITDCLLDRFMAHPVAYNADGQ 435
Query: 161 DPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEI 198
+ +P IS I N V L G + Q +++
Sbjct: 436 AAQQLPIISDILVKNTRIVGQNPLVELKGFVDEQAQQV 473
>gi|399032129|ref|ZP_10731768.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398069540|gb|EJL60890.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 479
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 110/251 (43%), Gaps = 45/251 (17%)
Query: 12 KHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD 71
++ R + +E N ++I ++ N+P +HP+ N + G+TV S PN DG D
Sbjct: 219 RYLRPNFIEFF-ECNTVLIKDIKIINAPFWILHPMKSNNIIIDGVTVNS--HGPNNDGCD 275
Query: 72 PD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGR 122
P+ C +G+ +A+KSG D DG +A PS NI V+ GV IG
Sbjct: 276 PEYSQNIIIKNCVFNTGDDCIAIKSGRDADGRRVAIPSKNIIVQNCK-MIDGHGGVVIGS 334
Query: 123 EMSGRIFNVTVNHL------------------------DVWMQ--QQGSYKD---RLRLY 153
E+S + NV V + DV+++ + G+ K+ +L ++
Sbjct: 335 EISAGVNNVFVENCIMDSPNLDRAIRIKTNSKRGGVIEDVYVRNLEVGTVKECVLKLNMF 394
Query: 154 GHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLA-GIIGTQFEEICMKNVSLLVQAPSV 212
+ IP I IS NV K V A G + E + +KNV ++ +A S+
Sbjct: 395 YNVYGSQTGSFIPVIRNISLENVTVKKAGKYGVWAEGYKESPVENVTLKNV-VIEKADSI 453
Query: 213 KWQCRFVSGFN 223
+ + + FN
Sbjct: 454 -YLLKNIKNFN 463
>gi|433424436|ref|ZP_20406465.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp.
BAB2207]
gi|432198085|gb|ELK54408.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax sp.
BAB2207]
Length = 519
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 98/235 (41%), Gaps = 41/235 (17%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD--- 71
R L+++ N+ +S +T NSP H VY + + +++ +P APN DG+D
Sbjct: 154 RPPLLQIDGCENV-TVSGVTLRNSPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDS 212
Query: 72 ------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
D +I++G+ + +KSG D G + RP+ N+ V + GV IG E +
Sbjct: 213 SRFVRVSDTHIDAGDDAICLKSGKDEQGREVGRPTENVVVTNCT-VEHGHGGVVIGSETA 271
Query: 126 GRIFNVTVNHLDVWMQQQG----SYKDR------LRL----------------YGHPKEG 159
G + +VTV + +G S + R LR Y
Sbjct: 272 GDVRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIAMRRVACPFVINGYYQTDID 331
Query: 160 WDP----KAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLVQAP 210
DP +A P + + F ++ + A LAG+ +FE I +V + P
Sbjct: 332 SDPEPVTEATPNVRNVDFHHITAEEVESAAFLAGLPEQRFEGISFTDVDIDATRP 386
>gi|395803712|ref|ZP_10482956.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434266|gb|EJG00216.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 492
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 99/233 (42%), Gaps = 43/233 (18%)
Query: 12 KHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD 71
++ R + +E N ++ ++ NSP +HP+ N + G+TV S PN DG D
Sbjct: 232 RYLRPNFIEFF-ECNTALVKDIKIINSPFWILHPIKTNNMIIDGVTVNS--HGPNNDGCD 288
Query: 72 PD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGR 122
P+ C +G+ +A+K+G D DG +A PS NI V+ GV IG
Sbjct: 289 PEYSQNILIRNCTFNTGDDCIAIKAGRDGDGRRVAIPSKNIIVQNCK-MIDGHGGVVIGS 347
Query: 123 EMSGRIFNVTVN-------HLDVWMQ-------------------QQGSYKD---RLRLY 153
E+S + NV V +LD ++ + G+ K+ +L ++
Sbjct: 348 EISAGVNNVFVENCVMDSPNLDRAIRIKTNSRRGGIIENIYVRNLEVGTVKECVLKLNMF 407
Query: 154 GHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLA-GIIGTQFEEICMKNVSL 205
+ IP I +S NV N K V A G + E I +KNV +
Sbjct: 408 YNVYGSQTGNFIPTIRNVSLENVTVKNGGKYSVWAEGYAESPVENITLKNVKI 460
>gi|254392542|ref|ZP_05007720.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|197706207|gb|EDY52019.1| glycoside hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 380
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 67/128 (52%), Gaps = 13/128 (10%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R +V+ ++LI S+LT + P T+HPV C N V+ +TV S L NTDG+DP
Sbjct: 122 YLRPKMVQFNRCRDVLI-SDLTIVDPPMWTVHPVLCTNVTVRNITVESLLH--NTDGVDP 178
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+ C + + VAVK+G D DG + PS +I V+ + G+ +G E
Sbjct: 179 EASRLVHITGCRFNTNDDCVAVKAGRDEDGHRVGVPSEDIVVQDCD-FSGRWGGITVGSE 237
Query: 124 MSGRIFNV 131
MSG + V
Sbjct: 238 MSGGVRRV 245
>gi|420263795|ref|ZP_14766431.1| glycoside family 77 [Enterococcus sp. C1]
gi|394769237|gb|EJF49100.1| glycoside family 77 [Enterococcus sp. C1]
Length = 537
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 35/218 (16%)
Query: 12 KHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD 71
+ RG L+ +M + NI + + LT + P T+H +YC G+T+ S N DG D
Sbjct: 260 RRVRGRLICMMQAKNIHL-TELTLIDPPCWTVHMIYCDTVVTHGVTIQSK-GIDNGDGWD 317
Query: 72 PD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGR 122
PD ++G+ +A+KSG + +G + RP+ NI R G+ IG
Sbjct: 318 PDSSQNLLIFDTVFDTGDDCIAIKSGKNPEGNQINRPAKNI--RLFDLAIRGGHGIAIGS 375
Query: 123 EMSGRIFNV---------TVNHLDVWMQ-QQGSYKDRL--------RLYGHP----KEGW 160
E SG + N+ T+ L++ Q +G Y ++ R HP +G
Sbjct: 376 EQSGGVENIAFRDCQLTNTLYGLELKAQNDRGGYIRQVTITDCLLDRFMAHPVAYNADGQ 435
Query: 161 DPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEI 198
+ +P IS I N V L G + Q +++
Sbjct: 436 AAQQLPIISDILVKNTRIVGQNPLVELKGFVDEQAQQV 473
>gi|325300479|ref|YP_004260396.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
gi|324320032|gb|ADY37923.1| Exo-poly-alpha-galacturonosidase [Bacteroides salanitronis DSM
18170]
Length = 493
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 11/144 (7%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
++ + W S R +V L+ N+ + + F NSP+ +HP+ C N ++ + V +
Sbjct: 213 LKTEEEWQSIRPFLRPVMVSLIECKNVWL-EGVIFQNSPAWNLHPLMCENVLIENVEVRN 271
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P A N DGLD + + G+ + +KSG D DG ARP N+ V +
Sbjct: 272 PSYAQNGDGLDLESCRNALIVNSTFDVGDDGICLKSGKDEDGRRRARPCENVIVDGCT-V 330
Query: 112 TPTCSGVGIGREMSGRIFNVTVNH 135
G +G EMSG + NV+V++
Sbjct: 331 FKGHGGFVVGSEMSGGVRNVSVSN 354
>gi|388256014|ref|ZP_10133195.1| polygalacturonase, putative, pga28A [Cellvibrio sp. BR]
gi|387939714|gb|EIK46264.1| polygalacturonase, putative, pga28A [Cellvibrio sp. BR]
Length = 505
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 12/120 (10%)
Query: 28 LIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYIES 78
++I +T N+P ++PV C N V G+ +S PN+DG DP+ C ++
Sbjct: 267 VLIEGVTITNAPFWLLNPVLCENVTVDGVNCIS--HGPNSDGCDPESCKNVVIKNCLFDT 324
Query: 79 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNHLDV 138
G+ +A+KSG + DG + P+ NI + GV IG E+SG + NV V H ++
Sbjct: 325 GDDCIAIKSGRNADGRRLNTPTENIVISHCK-MREGHGGVVIGSEISGGVRNVFVEHCEM 383
>gi|294815999|ref|ZP_06774642.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
gi|326444342|ref|ZP_08219076.1| glycoside hydrolase family 28 [Streptomyces clavuligerus ATCC
27064]
gi|294328598|gb|EFG10241.1| Pectate lyase [Streptomyces clavuligerus ATCC 27064]
Length = 479
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 22 MNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD-------- 73
N ++IS+LT + P T+HPV C N V+ +TV S L NTDG+DP+
Sbjct: 229 FNRCRDVLISDLTIVDPPMWTVHPVLCTNVTVRNITVESLLH--NTDGVDPEASRLVHIT 286
Query: 74 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 131
C + + VAVK+G D DG + PS +I V+ + G+ +G EMSG + V
Sbjct: 287 GCRFNTNDDCVAVKAGRDEDGHRVGVPSEDIVVQDCD-FSGRWGGITVGSEMSGGVRRV 344
>gi|431798726|ref|YP_007225630.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789491|gb|AGA79620.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 475
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 13/131 (9%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP-- 72
R V+ N+LI ++ N+P +HPV C N V+ + + + PN DG DP
Sbjct: 222 RPQFVQPFECKNVLI-QDVKLINAPMWNLHPVLCENVTVERVKIET--LGPNNDGCDPEA 278
Query: 73 -------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
DCY ++G+ +A+KSG + DG PS NI + GV IG E+S
Sbjct: 279 CKNVLIKDCYFDTGDDCIAIKSGRNEDGRIPGIPSENIIIEGCE-MKEGHGGVVIGSEIS 337
Query: 126 GRIFNVTVNHL 136
G NV +L
Sbjct: 338 GGARNVFAQNL 348
>gi|333897861|ref|YP_004471735.1| polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333113126|gb|AEF18063.1| Polygalacturonase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 518
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 69/145 (47%), Gaps = 14/145 (9%)
Query: 3 WDLWW-NSTLKHT--RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
+D WW ++ +K R V L N+LI +T NSPS TIHP+ +N + +
Sbjct: 207 FDTWWQDAKVKRIAWRPRTVYLNKCKNVLI-EGITIKNSPSWTIHPLMSQNLKFVNLNIE 265
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P APNTDGLDP+ G+ +A+KSG + PS N+ +R
Sbjct: 266 NPKDAPNTDGLDPESCKDVLIVGTRFSVGDDCIAIKSGKLSVSQKLPMPSENLIIRNCL- 324
Query: 111 TTPTCSGVGIGREMSGRIFNVTVNH 135
V IG EMSG + NV V +
Sbjct: 325 MEYGHGAVVIGSEMSGGVKNVHVEN 349
>gi|284036172|ref|YP_003386102.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283815465|gb|ADB37303.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 544
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 6 WWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAP 65
++ R +++ L IL+ +TF NSP+ +HP+ C + ++ +T +P A
Sbjct: 204 YYEGIKDFLRPNMLSLTRCKRILL-EGVTFQNSPAWCLHPLLCEDITLRRVTAKNPWYAQ 262
Query: 66 NTDGLD---------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCS 116
N DGLD DC + G+ + +KSG D G P+ NI VR S
Sbjct: 263 NGDGLDLESCRNGLVDDCTFDVGDDGICIKSGRDEQGRKRGVPTENITVRN-SRVYHAHG 321
Query: 117 GVGIGREMSGRIFNVTVNH 135
G IG EMSG + N+ V++
Sbjct: 322 GFVIGSEMSGGVKNLYVSN 340
>gi|317503775|ref|ZP_07961787.1| glycoside hydrolase [Prevotella salivae DSM 15606]
gi|315665072|gb|EFV04727.1| glycoside hydrolase [Prevotella salivae DSM 15606]
Length = 856
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 12/115 (10%)
Query: 26 NILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC---------YI 76
N + +S +T NSP IHP+ C+N V G+ + + PN DG DP+ +
Sbjct: 220 NRVRVSGVTLLNSPFWVIHPLQCKNVTVDGVKIWN--EGPNGDGCDPEACENVLIQNTHF 277
Query: 77 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 131
+G+ +A+KSG ++DG +PS NI +RR G+ IG E+SG NV
Sbjct: 278 HTGDDCIAIKSGRNNDGRLWNQPSKNIIIRRCV-MEDGHGGIVIGSEISGGCMNV 331
>gi|330996084|ref|ZP_08319977.1| polygalacturonase [Paraprevotella xylaniphila YIT 11841]
gi|329573855|gb|EGG55436.1| polygalacturonase [Paraprevotella xylaniphila YIT 11841]
Length = 466
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 69/136 (50%), Gaps = 19/136 (13%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD--- 71
R HL+ L N+L+ + + SP TIH C+ G V+ + V + + N DG+D
Sbjct: 207 RPHLIHLNRCRNVLL-EDFSIRESPFWTIHLYMCKGGIVRRLDVKA--NGHNNDGIDLEM 263
Query: 72 ------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGR 122
+C + G+ V +KSG + D + PS NI +R ++G T +GIG
Sbjct: 264 SRDFLIENCTFDQGDDAVVIKSGRNRDAWRLDTPSENIVIRNCKILAGHTL----LGIGS 319
Query: 123 EMSGRIFNVTVNHLDV 138
E+SG I N+ ++H DV
Sbjct: 320 ELSGGIRNIFMHHCDV 335
>gi|288541509|gb|ADC45581.1| glycoside hydrolase [Streptomyces nanchangensis]
Length = 433
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 69/137 (50%), Gaps = 17/137 (12%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R +V+ N+L+ S LT + P T+HPV N V+ +TV S L NTDG DP
Sbjct: 171 YLRPKMVQFYRCRNVLV-SGLTIVDPPMWTVHPVLSTNVTVRDITVDSTLY--NTDGCDP 227
Query: 73 DC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR--VSGTTPTCSGVGIG 121
+C + + VAVKSG D DG + PS NI VR SG G+ +G
Sbjct: 228 ECCSDVLITGCRFNTNDDCVAVKSGRDEDGHRVGVPSRNIVVRDCWFSG---RWGGMTVG 284
Query: 122 REMSGRIFNVTVNHLDV 138
EMSG + +V + ++
Sbjct: 285 SEMSGGVRDVFAENCEI 301
>gi|29346428|ref|NP_809931.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
gi|29338324|gb|AAO76125.1| polygalacturonase (Pectinase) [Bacteroides thetaiotaomicron
VPI-5482]
Length = 445
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 11/115 (9%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP---------DCYIESGN 80
I + NSP T++P +C N +KG+T+ + + +PNTDG++P DC+I G+
Sbjct: 205 IEGVKIVNSPFWTVNPEFCDNVTIKGITI-NNVPSPNTDGINPESCRNVHISDCHISVGD 263
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
+ +KSG D + P NI + + + GV IG EMSG + VT+++
Sbjct: 264 DCITIKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVRKVTISN 317
>gi|357054504|ref|ZP_09115588.1| hypothetical protein HMPREF9467_02560 [Clostridium clostridioforme
2_1_49FAA]
gi|355384476|gb|EHG31541.1| hypothetical protein HMPREF9467_02560 [Clostridium clostridioforme
2_1_49FAA]
Length = 522
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 71/142 (50%), Gaps = 16/142 (11%)
Query: 6 WWNS-TLKHT--RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WW+ + HT R ++ L + + +T NSPS IHP + + + VLSP
Sbjct: 211 WWHEPKVIHTACRPRMIFLERCRQV-TVQGITVRNSPSWNIHPYFSDHLRFFDLKVLSPK 269
Query: 63 SAPNTDGLDPD----------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
+PNTDGLDP+ C+ G+ +AVKSG + G PS NI++RR
Sbjct: 270 DSPNTDGLDPESCKDVEIAGVCF-SVGDDCIAVKSGKIYMGSTYKCPSKNISIRRCCMRD 328
Query: 113 PTCSGVGIGREMSGRIFNVTVN 134
S V IG EM+G + ++TV
Sbjct: 329 GHGS-VTIGSEMAGGVKDLTVK 349
>gi|383122658|ref|ZP_09943350.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
gi|251842244|gb|EES70324.1| hypothetical protein BSIG_0597 [Bacteroides sp. 1_1_6]
Length = 445
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 11/115 (9%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP---------DCYIESGN 80
I + NSP T++P +C N +KG+T+ + + +PNTDG++P DC+I G+
Sbjct: 205 IEGVKIVNSPFWTVNPEFCDNVTIKGITI-NNVPSPNTDGINPESCRNVHISDCHISVGD 263
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
+ +KSG D + P NI + + + GV IG EMSG + VT+++
Sbjct: 264 DCITIKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVRKVTISN 317
>gi|390453172|ref|ZP_10238700.1| polygalacturonase [Paenibacillus peoriae KCTC 3763]
Length = 453
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 27/149 (18%)
Query: 6 WWN------STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
WW L++ R L+ + I ++ NSPS T++P+ C N + +++L
Sbjct: 117 WWEKHRNHPEDLQYPRPKLISFDRCQRVTI-KDVMLKNSPSWTVNPIACYNVTIDNLSIL 175
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG++P+ C I+ G+ +A+K+G + IA ++
Sbjct: 176 NPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTEDT-------QERIACENITI 228
Query: 111 TTPTC----SGVGIGREMSGRIFNVTVNH 135
T T GV +G EMSG I NVT+++
Sbjct: 229 TNCTMVHGHGGVVLGSEMSGDIRNVTISN 257
>gi|313236094|emb|CBY11419.1| unnamed protein product [Oikopleura dioica]
Length = 204
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 16/135 (11%)
Query: 6 WW---NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WW + LK R L + + N I LT+ NSP TIH VY N + + +L+
Sbjct: 69 WWTRNSQNLKFERPRLFQCLFCKN-FKIEKLTWKNSPFWTIHFVYSENIEIADVAILAEH 127
Query: 63 SAPNTDGLD---------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+ NTDG+D D +I+ G+ ++A+KSG+D G P+ N+ V +
Sbjct: 128 ESRNTDGIDIDSSSNVHIHDVFIDVGDDVIALKSGFDFCGREFGMPTKNVLVEN---SVF 184
Query: 114 TCSGVGIGREMSGRI 128
IG EMSG +
Sbjct: 185 INENFAIGSEMSGGV 199
>gi|380695284|ref|ZP_09860143.1| polygalacturonase (Pectinase) [Bacteroides faecis MAJ27]
Length = 438
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP---------DCYIESGN 80
I + NSP T++P +C N +KG+T+ + +PNTDG++P DC+I G+
Sbjct: 198 IEGVKIVNSPFWTVNPEFCDNVTIKGITI-DNVPSPNTDGINPESCRNVHISDCHISVGD 256
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
+ +KSG D + P NI + + + GV IG EMSG + VT+++
Sbjct: 257 DCITIKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVRKVTISN 310
>gi|357386032|ref|YP_004900756.1| Polygalacturonase [Pelagibacterium halotolerans B2]
gi|351594669|gb|AEQ53006.1| Polygalacturonase [Pelagibacterium halotolerans B2]
Length = 508
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 68/142 (47%), Gaps = 14/142 (9%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W W T + R N L +S LT NSPS TIHP+ C + + +P
Sbjct: 208 WWEWPKETREGARRPRTVFANRCTQLKMSGLTVRNSPSWTIHPLDCAGAVFADLAIENPP 267
Query: 63 SAPNTDGLDPDCYIE---------SGNGLVAVKSG--WDHDGIAMARPSSNIAVRRVSGT 111
+PNTDGL+P+ + G+ +A+K+G W DG A P+ N++VR
Sbjct: 268 DSPNTDGLNPESSTDIEIVGVRFSVGDDCIAIKAGKIW-PDGTVPA-PTRNVSVRHCL-M 324
Query: 112 TPTCSGVGIGREMSGRIFNVTV 133
GV IG EMSG + +VTV
Sbjct: 325 ERGHGGVVIGSEMSGSVTDVTV 346
>gi|269119326|ref|YP_003307503.1| glycoside hydrolase family protein [Sebaldella termitidis ATCC
33386]
gi|268613204|gb|ACZ07572.1| glycoside hydrolase family 28 [Sebaldella termitidis ATCC 33386]
Length = 509
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 70/144 (48%), Gaps = 14/144 (9%)
Query: 4 DLWW-NSTLKHT--RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+ WW ++ +K R + L + SNI I+ + NSPS T+HPV+ N M + +
Sbjct: 205 ETWWKDAKIKRISWRPRTIFLTDCSNINIVG-INIENSPSWTLHPVFSSNLGFFDMKIRN 263
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P +PNTDG+DP+ G+ +A+KSG G + PS NI +
Sbjct: 264 PKDSPNTDGIDPESCKNVSIIGVKFSVGDDCIAIKSGKGKIGREIGIPSENINIENCH-M 322
Query: 112 TPTCSGVGIGREMSGRIFNVTVNH 135
GV IG EMSG I NV + +
Sbjct: 323 EFGHGGVVIGSEMSGGIKNVNIKN 346
>gi|388495020|gb|AFK35576.1| unknown [Lotus japonicus]
Length = 172
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 128 IFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVL 187
I N+T+ ++D+ ++ G Y + HP E +DP A+P I I+ +V+ N +A ++
Sbjct: 39 ISNMTLANIDIAIRFTGLYGE------HPDEAYDPDALPLIERITIKDVIGENVKRAGLI 92
Query: 188 AGIIGTQFEEICMKNVSLLVQAPSVKWQCRFVSGFN 223
GI G F IC+ N+SL V + V W C V G++
Sbjct: 93 QGIKGYDFVNICLSNISLNVSS-KVPWNCSDVKGYS 127
>gi|298385760|ref|ZP_06995318.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298261901|gb|EFI04767.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 445
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP---------DCYIESGN 80
I + NSP T++P +C N +KG+T+ + + +PNTDG++P DC+I G+
Sbjct: 205 IEGVKIVNSPFWTVNPEFCDNVTIKGITI-NNVPSPNTDGINPESCRNVHISDCHISVGD 263
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
+ +KSG D + P NI + + GV IG EMSG + VT+++
Sbjct: 264 DCITIKSGRDAQARRLGVPCENITITNCT-MLAGHGGVVIGSEMSGSVRKVTISN 317
>gi|237710945|ref|ZP_04541426.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229454789|gb|EEO60510.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 446
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 14/140 (10%)
Query: 7 WNSTL--KHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSA 64
W+ TL + R + + N+ + +T NSP T++P +C N +KG+T+ + + +
Sbjct: 184 WHGTLDRRFFRPPFIHPIRCKNVRV-EGVTIINSPFWTVNPEFCDNVTIKGITIHN-VPS 241
Query: 65 PNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 115
PNTDG++P DC+I G+ + +KSG D + P NI + + +
Sbjct: 242 PNTDGINPESCKNVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGH- 300
Query: 116 SGVGIGREMSGRIFNVTVNH 135
GV IG EMSG + VT+++
Sbjct: 301 GGVVIGSEMSGGVKKVTISN 320
>gi|315497213|ref|YP_004086017.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315415225|gb|ADU11866.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 466
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 17/133 (12%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
H R H V+ ++LI +++ +SP TIHP+ CR+ ++ + V + N DG+DP
Sbjct: 207 HLRPHFVQFNRCRHVLI-EDISIEDSPFWTIHPLLCRDVVIRRVKVRA--HGHNNDGVDP 263
Query: 73 ---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR--RVSGTTPTCSGVGIG 121
DC + G+ V+VKSG D D + P+ N+ +R R+ + +G
Sbjct: 264 EMSQNVLIEDCVFDQGDDAVSVKSGRDMDAWRLNTPTKNVVMRNCRIKNGHQL---MAVG 320
Query: 122 REMSGRIFNVTVN 134
E+SG I N+ V+
Sbjct: 321 SELSGGIENIFVD 333
>gi|423299813|ref|ZP_17277838.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
gi|408473622|gb|EKJ92144.1| hypothetical protein HMPREF1057_00979 [Bacteroides finegoldii
CL09T03C10]
Length = 450
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP---------DCYIESGN 80
I + NSP T++P +C N +KG+T+ + +PNTDG++P DC+I G+
Sbjct: 205 IEGVKIVNSPFWTVNPEFCDNVTIKGITI-DNVPSPNTDGINPESCRNVHISDCHISVGD 263
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
+ +KSG D + P NI + + + GV IG EMSG + VT+++
Sbjct: 264 DCITIKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVRKVTISN 317
>gi|390933294|ref|YP_006390799.1| glycoside hydrolase family protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389568795|gb|AFK85200.1| glycoside hydrolase family 28 [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 518
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 69/145 (47%), Gaps = 14/145 (9%)
Query: 3 WDLWW-NSTLKHT--RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
+D WW ++ +K R V L N+LI +T NSPS TIHP+ +N + +
Sbjct: 207 FDTWWYDAKVKRIAWRPRTVYLNKCKNVLI-EGITIRNSPSWTIHPLMSQNLKFINLNIE 265
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P APNTDGLDP+ G+ +A+KSG + PS N+ +R
Sbjct: 266 NPKDAPNTDGLDPESCKDVLIAGTRFSVGDDCIAIKSGKLSVSQKLPMPSENLYIRNCL- 324
Query: 111 TTPTCSGVGIGREMSGRIFNVTVNH 135
V IG EMSG + NV V +
Sbjct: 325 MEYGHGAVVIGSEMSGGVKNVHVEN 349
>gi|411100599|gb|AFW03783.1| Putative polygalacturonase [Enterobacteriaceae bacterium HS]
Length = 456
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 10/114 (8%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYIESGN 80
+ ++T NSP T H VY R+ ++G+ +L+P A NTD +D D C + G+
Sbjct: 194 LEDITLQNSPFWTCHTVYSRDIILRGVKILNPADAINTDAVDLDSSEDIVIEHCLFDVGD 253
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVN 134
V +KSG DG+ + P+ + V + G+ IG E +G I +VTVN
Sbjct: 254 DAVTLKSGSGADGLRINLPTRGVTVSHCK-ILASHGGIAIGSETAGGIEDVTVN 306
>gi|383113004|ref|ZP_09933785.1| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
gi|382948911|gb|EFS29452.2| hypothetical protein BSGG_0152 [Bacteroides sp. D2]
Length = 444
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP---------DCYIESGN 80
I + NSP T++P +C N +KG+T+ + S PNTDG++P DC+I G+
Sbjct: 205 IEGVKIINSPFWTVNPEFCDNVIIKGITIDNAPS-PNTDGVNPESCRNVHISDCHISVGD 263
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
+ +KSG D + P NI + + + GV IG EMSG + VT+++
Sbjct: 264 DCITIKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVRKVTISN 317
>gi|159040816|ref|YP_001540068.1| glycoside hydrolase [Caldivirga maquilingensis IC-167]
gi|157919651|gb|ABW01078.1| glycoside hydrolase family 28 [Caldivirga maquilingensis IC-167]
Length = 462
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 21/133 (15%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R L++L N+ N+ I +TF +SP TIH +Y R+ + + ++P +PNTDG+ D
Sbjct: 189 RPQLLQLYNAENVTI-EGVTFKDSPMWTIHILYSRHVTLINTSSIAPDYSPNTDGVVVDS 247
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNI-----AVRRVSGTTPTCSGVGI 120
C I+ G+ + +KSG D +G + PS NI ++R G G I
Sbjct: 248 SSDVEVRGCMIDVGDDCLVIKSGRDEEGRRIGIPSENIHASGCLMKRGHG------GFVI 301
Query: 121 GREMSGRIFNVTV 133
G EMSG + NV++
Sbjct: 302 GSEMSGGVRNVSI 314
>gi|420264265|ref|ZP_14766898.1| polygalacturonase [Enterococcus sp. C1]
gi|394768641|gb|EJF48547.1| polygalacturonase [Enterococcus sp. C1]
Length = 438
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 19/145 (13%)
Query: 6 WWNS------TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
WW + L + R L+ +S + + ++ +SPS T++P+ C+N + + +
Sbjct: 115 WWKTFRENREQLAYPRPKLISF-DSCQQITLKDIRLVDSPSWTVNPILCQNLTIDNLRIK 173
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG+DP+ C+I+ G+ +A+KSG + +A NI +
Sbjct: 174 NPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKSGTEDTKERVA--CENITIVNCH- 230
Query: 111 TTPTCSGVGIGREMSGRIFNVTVNH 135
V +G EMSG I NVT+++
Sbjct: 231 MLHGHGAVVLGSEMSGDIRNVTISN 255
>gi|23099543|ref|NP_693009.1| hypothetical protein OB2088 [Oceanobacillus iheyensis HTE831]
gi|22777773|dbj|BAC14044.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 495
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 10/123 (8%)
Query: 22 MNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD-------- 73
M + + + +T NSP H VYC N + + +P PN DGLD D
Sbjct: 167 MYDCDSVTLDGITLENSPFWNTHFVYCDNVTIHNVKFKNPWDTPNGDGLDLDSCSNVRVS 226
Query: 74 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 132
C+ + G+ +A KSG + DG +ARP+ N+AV + G+ +G E SG I N+
Sbjct: 227 NCHFDVGDDCLAFKSGINEDGRRVARPTENVAVTNCTMKNGH-GGIVMGSENSGGIRNIA 285
Query: 133 VNH 135
V++
Sbjct: 286 VSN 288
>gi|325570664|ref|ZP_08146390.1| polygalacturonase [Enterococcus casseliflavus ATCC 12755]
gi|325156510|gb|EGC68690.1| polygalacturonase [Enterococcus casseliflavus ATCC 12755]
Length = 438
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 19/145 (13%)
Query: 6 WWNS------TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
WW + L + R L+ +S + + ++ +SPS T++P+ C+N + + +
Sbjct: 115 WWKTFRENREQLAYPRPKLISF-DSCQQITLKDIRLVDSPSWTVNPILCQNLTIDNLRIK 173
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG+DP+ C+I+ G+ +A+KSG + +A NI +
Sbjct: 174 NPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKSGTEDTKERVA--CENITIVNCH- 230
Query: 111 TTPTCSGVGIGREMSGRIFNVTVNH 135
V +G EMSG I NVT+++
Sbjct: 231 MLHGHGAVVLGSEMSGDIRNVTISN 255
>gi|325106070|ref|YP_004275724.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974918|gb|ADY53902.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 552
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R +L+ L N N+L+ +TF NSP+ +HP+ C N ++G+ + +P A N DG D +
Sbjct: 225 RPNLIVLNNCKNVLL-EGVTFQNSPAWNVHPIMCENLTLRGLFIKNPDYAHNGDGADIES 283
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C + G+ + +KSG D +G + N+ +R + G +G EMS
Sbjct: 284 CKNVLVEHCIFDVGDDAICIKSGKDEEGRKRGIATENVIIRN-NTVYKGHGGFVVGSEMS 342
Query: 126 GRIFNVTV 133
G N+ V
Sbjct: 343 GGAKNIFV 350
>gi|116626800|ref|YP_828956.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116229962|gb|ABJ88671.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 462
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 12/111 (10%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYIESGN 80
I ++T NSP +HPV CRN + + V S PN DG DP+ C ++G+
Sbjct: 225 IEDVTITNSPMYEMHPVLCRNVIARNVKVSS--HGPNNDGCDPESSVDVLIDGCTFDTGD 282
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 131
+A+KSG + DG + PS N+ V+ GV +G E SG I NV
Sbjct: 283 DCIAIKSGRNADGRRLHSPSENLIVQNCV-MKDGHGGVTMGSECSGGIRNV 332
>gi|266623900|ref|ZP_06116835.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288864287|gb|EFC96585.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 537
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 14/143 (9%)
Query: 3 WDLWWN---STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
+D WW + + R +V +N + +++ +T NSPS +HP + + +T+L
Sbjct: 206 FDDWWEDDRAKIIAFRPRMV-FLNHCDHVVLHGVTIQNSPSWNLHPYFSDDLRFLDLTIL 264
Query: 60 SPLSAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG+DP+ Y G+ +A+KSG + G PS NI VR+
Sbjct: 265 NPWDSPNTDGMDPESVNGLEIAGIYFSLGDDCIALKSGKYYMGHKYKVPSQNIEVRQCCM 324
Query: 111 TTPTCSGVGIGREMSGRIFNVTV 133
V IG EM+ + +V V
Sbjct: 325 NNGH-GAVTIGSEMAAGVKHVHV 346
>gi|310642874|ref|YP_003947632.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus polymyxa SC2]
gi|309247824|gb|ADO57391.1| Galacturan 1,4-alpha-galacturonidase [Paenibacillus polymyxa SC2]
gi|392303699|emb|CCI70062.1| Polygalacturonase PG [Paenibacillus polymyxa M1]
Length = 453
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 19/145 (13%)
Query: 6 WWN------STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
WW L++ R L+ + + I ++ NSPS T++P+ C N + +++L
Sbjct: 117 WWEKHRNHPEELQYPRPKLISF-DRCQRVTIKDVMLKNSPSWTVNPIACYNVTIDNLSIL 175
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG++P+ C I+ G+ +A+K+G + + P NI + +
Sbjct: 176 NPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTEDTQERI--PCENITITNCT- 232
Query: 111 TTPTCSGVGIGREMSGRIFNVTVNH 135
V +G EMSG I NVT+++
Sbjct: 233 MVHGHGAVVLGSEMSGDIRNVTISN 257
>gi|436837106|ref|YP_007322322.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
gi|384068519|emb|CCH01729.1| glycoside hydrolase family 28 [Fibrella aestuarina BUZ 2]
Length = 777
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 67/130 (51%), Gaps = 11/130 (8%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD--- 71
R ++V L +L+ +TF NSP+ T+HP+ C + ++G+TV + A N DG+D
Sbjct: 448 RPNMVSLTRCQYVLL-DGVTFQNSPAWTLHPLLCEHVTMRGVTVKNQWYAQNGDGVDLES 506
Query: 72 ------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
+C ++G+ + +KSG D +G P+ N +R G IG EMS
Sbjct: 507 CRNGLLENCTFDTGDDGITIKSGRDEEGRKRGVPTENFIIRDCR-VYQAHGGFVIGSEMS 565
Query: 126 GRIFNVTVNH 135
G + N+ V++
Sbjct: 566 GGVRNMYVSN 575
>gi|189463211|ref|ZP_03011996.1| hypothetical protein BACCOP_03924 [Bacteroides coprocola DSM 17136]
gi|189430190|gb|EDU99174.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 431
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 58/126 (46%), Gaps = 13/126 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP-- 72
R + L NIL+ T SP IHP+ N +KG+ + S PN DG DP
Sbjct: 176 RPQFINLYKCKNILL-EGFTINRSPFWLIHPLLSENVTIKGVKMQS--HGPNNDGCDPES 232
Query: 73 -------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
DC ++G+ +A+KSG D DG P NI VR +GV IG E++
Sbjct: 233 CENVLIEDCDFDTGDDCIAIKSGRDEDGRYWNIPCKNIIVRECR-MKDGHAGVAIGSEIT 291
Query: 126 GRIFNV 131
G NV
Sbjct: 292 GGCHNV 297
>gi|374324810|ref|YP_005077939.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus terrae HPL-003]
gi|357203819|gb|AET61716.1| galacturan 1,4-alpha-galacturonidase [Paenibacillus terrae HPL-003]
Length = 476
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 72/145 (49%), Gaps = 19/145 (13%)
Query: 6 WWNSTLKHT------RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
WW KH R L+ + + I ++ NSPS T++P+ C N + +++L
Sbjct: 140 WWEKHRKHPEELQYPRPKLISF-DRCQRVTIKDVMLKNSPSWTVNPIACYNVTIDNVSIL 198
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG++P+ C I+ G+ +A+K+G + + P NI + +
Sbjct: 199 NPTDSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTEDTQERI--PCENITITNCT- 255
Query: 111 TTPTCSGVGIGREMSGRIFNVTVNH 135
V +G EMSG I NVT+++
Sbjct: 256 MVHGHGAVVLGSEMSGDIRNVTISN 280
>gi|336402515|ref|ZP_08583249.1| hypothetical protein HMPREF0127_00562 [Bacteroides sp. 1_1_30]
gi|335948128|gb|EGN09853.1| hypothetical protein HMPREF0127_00562 [Bacteroides sp. 1_1_30]
Length = 455
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP---------DCYIESGN 80
I + NSP T++P +C N +KG+T+ + S PNTDG++P DC+I G+
Sbjct: 205 IEGVKIINSPFWTVNPEFCDNVTIKGITIDNAPS-PNTDGVNPESCRNVHISDCHISVGD 263
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
+ +KSG D + P NI + + + GV IG EMSG + VT+++
Sbjct: 264 DCITIKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVCKVTISN 317
>gi|298481339|ref|ZP_06999532.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298272543|gb|EFI14111.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 464
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP---------DCYIESGN 80
I + NSP T++P +C N +KG+T+ + S PNTDG++P DC+I G+
Sbjct: 214 IEGVKIINSPFWTVNPEFCDNVTIKGITIDNAPS-PNTDGVNPESCRNVHISDCHISVGD 272
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
+ +KSG D + P NI + + + GV IG EMSG + VT+++
Sbjct: 273 DCITIKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVRKVTISN 326
>gi|374374281|ref|ZP_09631940.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
gi|373233723|gb|EHP53517.1| glycoside hydrolase family 28 [Niabella soli DSM 19437]
Length = 465
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 13/135 (9%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
H R ++ S NIL+ ++ NSP TIH +N ++ + V + N DG+DP
Sbjct: 215 HLRPQFIQFNRSENILL-EGVSVVNSPFWTIHLYLSKNIRLRNLNVYA--HGHNNDGVDP 271
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+ C + G+ +A+KSG + +G + PS NI +R + V IG E
Sbjct: 272 EMSQNVLIENCVFDQGDDAIAIKSGRNPEGWRLKTPSKNIVIRNCT-VKNGHQLVAIGSE 330
Query: 124 MSGRIFNVTVNHLDV 138
+SG I NV ++H V
Sbjct: 331 LSGGIENVFIDHCTV 345
>gi|448581096|ref|ZP_21645086.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax gibbonsii
ATCC 33959]
gi|445733858|gb|ELZ85418.1| exo-poly-alpha-D-galacturonosidase precursor [Haloferax gibbonsii
ATCC 33959]
Length = 512
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 41/235 (17%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD--- 71
R L+++ N+ +S +T NSP H VY + + +++ +P APN DG+D
Sbjct: 154 RPPLLQIDGCENV-TVSGVTLRNSPFWNTHVVYSDDVTIHDVSIQNPPDAPNGDGIDIDS 212
Query: 72 ------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
D +I++G+ + +KSG D G + RP+ N+ V + GV IG E +
Sbjct: 213 SRFVRVSDTHIDAGDDAICLKSGKDEQGREVGRPTENVVVTNCT-VEHGHGGVVIGSETA 271
Query: 126 GRIFNVTVNHLDVWMQQQG----SYKDR------LRL----------------YGHPKEG 159
G + +VTV + +G S + R LR Y
Sbjct: 272 GDVRHVTVTNCTFTDTDRGIRIKSKRGRGGTVEDLRFDTIVMRRVACPFVINGYYQTDID 331
Query: 160 WDP----KAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLVQAP 210
+P +A P + + F ++ + A LAG+ +FE I +V + P
Sbjct: 332 SEPEPVTEATPNVRNVDFHHITAEEVESAAFLAGLPEQRFEGISFTDVDIDATRP 386
>gi|384047530|ref|YP_005495547.1| glycoside hydrolase Family 28 [Bacillus megaterium WSH-002]
gi|345445221|gb|AEN90238.1| Glycoside Hydrolase Family 28 [Bacillus megaterium WSH-002]
Length = 465
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 13/132 (9%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R ++ +S NI+I +T NSP I+PV N + + ++ PN DG+DP
Sbjct: 210 YLRPSFIQPYHSKNIMI-KGVTILNSPMWQINPVLSENILIDDVKIIG--HGPNNDGVDP 266
Query: 73 ---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
D Y ++G+ +A+KSG + DG + PS NI + + GV IG E
Sbjct: 267 ESSKNVLIKDSYFDNGDDCIAIKSGRNADGRRINVPSENIIIEG-NEMKDGHGGVVIGSE 325
Query: 124 MSGRIFNVTVNH 135
+SG + NV H
Sbjct: 326 ISGSVRNVFAQH 337
>gi|294645183|ref|ZP_06722905.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294808093|ref|ZP_06766866.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|292639470|gb|EFF57766.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294444734|gb|EFG13428.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
Length = 455
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP---------DCYIESGN 80
I + NSP T++P +C N +KG+T+ + S PNTDG++P DC+I G+
Sbjct: 205 IEGVKIINSPFWTVNPEFCDNVTIKGITIDNAPS-PNTDGVNPESCRNVHISDCHISVGD 263
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
+ +KSG D + P NI + + + GV IG EMSG + VT+++
Sbjct: 264 DCITIKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVRKVTISN 317
>gi|308069843|ref|YP_003871448.1| polygalacturonase [Paenibacillus polymyxa E681]
gi|305859122|gb|ADM70910.1| Polygalacturonase (Pectinase) (PGL) [Paenibacillus polymyxa E681]
Length = 453
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 19/145 (13%)
Query: 6 WWN------STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
WW L++ R L+ + + I ++ NSPS T++P+ C N + +++L
Sbjct: 117 WWQKHRNHPEELQYPRPKLISF-DRCQRVTIKDVMLKNSPSWTVNPIACYNVTIDNLSIL 175
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG++P+ C I+ G+ +A+K+G + + P NI + +
Sbjct: 176 NPADSPNTDGINPESCSNVRISNCNIDVGDDCIAIKAGTEDTQERI--PCENITITNCT- 232
Query: 111 TTPTCSGVGIGREMSGRIFNVTVNH 135
V +G EMSG I NVT+++
Sbjct: 233 MVHGHGAVVLGSEMSGDIRNVTISN 257
>gi|237720811|ref|ZP_04551292.1| polygalacturonase [Bacteroides sp. 2_2_4]
gi|229449646|gb|EEO55437.1| polygalacturonase [Bacteroides sp. 2_2_4]
Length = 455
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP---------DCYIESGN 80
I + NSP T++P +C N +KG+T+ + S PNTDG++P DC+I G+
Sbjct: 205 IEGVKIINSPFWTVNPEFCDNVTIKGITIDNAPS-PNTDGVNPESCRNVHISDCHISVGD 263
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
+ +KSG D + P NI + + + GV IG EMSG + VT+++
Sbjct: 264 DCITIKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVRKVTISN 317
>gi|299145498|ref|ZP_07038566.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|298515989|gb|EFI39870.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
Length = 450
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP---------DCYIESGN 80
I + NSP T++P +C N +KG+T+ + S PNTDG++P DC+I G+
Sbjct: 205 IEGVKIINSPFWTVNPEFCNNVTIKGITIDNAPS-PNTDGVNPESCRNVHISDCHISVGD 263
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
+ +KSG D + P NI + + + GV IG EMSG + VT+++
Sbjct: 264 DCITIKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVRKVTISN 317
>gi|255536015|ref|YP_003096386.1| glycoside hydrolase, family 28 [Flavobacteriaceae bacterium
3519-10]
gi|255342211|gb|ACU08324.1| glycoside hydrolase, family 28 [Flavobacteriaceae bacterium
3519-10]
Length = 491
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 12 KHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD 71
++ R + +E N+LI +T N+P +HP+ +N V G+ + S PN DGLD
Sbjct: 231 RYLRPNFIEPFECENVLI-QGITIINAPFWILHPIKSKNIIVDGVNIRS--HGPNNDGLD 287
Query: 72 PD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGR 122
P+ +G+ +A+K+G D +G + + NI VR GV IG
Sbjct: 288 PEYSQNVLIKNSIFNTGDDCIAIKAGRDEEGRRVGIMTENIIVRDCK-MIDGHGGVVIGS 346
Query: 123 EMSGRIFNVTV--NHLD 137
EMS + NV V NH+D
Sbjct: 347 EMSAGVRNVFVYNNHMD 363
>gi|262408002|ref|ZP_06084550.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|293369111|ref|ZP_06615706.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|336416263|ref|ZP_08596599.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345511524|ref|ZP_08791064.1| polygalacturonase [Bacteroides sp. D1]
gi|423286902|ref|ZP_17265753.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
gi|262354810|gb|EEZ03902.1| polygalacturonase [Bacteroides sp. 2_1_22]
gi|292635823|gb|EFF54320.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|335938994|gb|EGN00873.1| hypothetical protein HMPREF1017_03707 [Bacteroides ovatus
3_8_47FAA]
gi|345454069|gb|EEO49839.2| polygalacturonase [Bacteroides sp. D1]
gi|392674440|gb|EIY67888.1| hypothetical protein HMPREF1069_00796 [Bacteroides ovatus
CL02T12C04]
Length = 450
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP---------DCYIESGN 80
I + NSP T++P +C N +KG+T+ + S PNTDG++P DC+I G+
Sbjct: 205 IEGVKIINSPFWTVNPEFCDNVTIKGITIDNAPS-PNTDGVNPESCRNVHISDCHISVGD 263
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
+ +KSG D + P NI + + + GV IG EMSG + VT+++
Sbjct: 264 DCITIKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVRKVTISN 317
>gi|189461873|ref|ZP_03010658.1| hypothetical protein BACCOP_02539 [Bacteroides coprocola DSM 17136]
gi|189431467|gb|EDV00452.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 494
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
++ + W S R +V + N+ + + F NSP+ +HP+ C N ++ + V +
Sbjct: 213 LKTEEEWQSVRHFLRPVMVSFIECKNVWL-EGVVFQNSPAWNLHPLMCENVLIENVEVRN 271
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P A N DGLD + + G+ + +KSG D DG AR N+ V +
Sbjct: 272 PSYAQNGDGLDLESCKNALIVNSSFDVGDDGICLKSGKDEDGRRRARACENVIVDGCT-V 330
Query: 112 TPTCSGVGIGREMSGRIFNVTVNH 135
G +G EMSG + N++VN+
Sbjct: 331 YKGHGGFVVGSEMSGGVRNISVNN 354
>gi|146301851|ref|YP_001196442.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156269|gb|ABQ07123.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 560
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 11/130 (8%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC 74
R +V + NS +L F NSP+ IHP + V+ +TV +P + N DGLD +C
Sbjct: 231 RPVMVSIQNSKRVLF-DGPVFQNSPAWNIHPFMVEDLIVRNVTVRNPWYSQNGDGLDVEC 289
Query: 75 ---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
+ G+ + +KSG D DG+ P NI VR + GV +G EMS
Sbjct: 290 CKNVLVENSSFDVGDDAICIKSGKDKDGLERGIPCENIIVRN-NIVYHGHGGVTVGSEMS 348
Query: 126 GRIFNVTVNH 135
G + N+ V++
Sbjct: 349 GGVKNLHVSN 358
>gi|423213419|ref|ZP_17199948.1| hypothetical protein HMPREF1074_01480 [Bacteroides xylanisolvens
CL03T12C04]
gi|392693879|gb|EIY87109.1| hypothetical protein HMPREF1074_01480 [Bacteroides xylanisolvens
CL03T12C04]
Length = 450
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP---------DCYIESGN 80
I + NSP T++P +C N +KG+T+ + S PNTDG++P DC+I G+
Sbjct: 205 IEGVKIINSPFWTVNPEFCDNVTIKGITIDNAPS-PNTDGVNPESCRNVHISDCHISVGD 263
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
+ +KSG D + P NI + + + GV IG EMSG + VT+++
Sbjct: 264 DCITIKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVRKVTISN 317
>gi|383641178|ref|ZP_09953584.1| glycoside hydrolase [Sphingomonas elodea ATCC 31461]
Length = 465
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 13/121 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R V+ + N+LI + +P IHPV CRN V+G+ VL PN DG DP+
Sbjct: 212 RPAFVQPYDCENVLI-EGVKLRGAPFWQIHPVLCRNLIVRGVDVLG--HGPNNDGCDPES 268
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C ++G+ +A+ SG + DG +A P+ NI +R GV +G ++S
Sbjct: 269 VDGALIERCTFDTGDDCIAINSGRNEDGRRLAMPAQNILIRDCR-MKEGHGGVVVGSQIS 327
Query: 126 G 126
G
Sbjct: 328 G 328
>gi|160886115|ref|ZP_02067118.1| hypothetical protein BACOVA_04122 [Bacteroides ovatus ATCC 8483]
gi|156108928|gb|EDO10673.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 459
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP---------DCYIESGN 80
I + NSP T++P +C N +KG+T+ + S PNTDG++P DC+I G+
Sbjct: 214 IEGVKIINSPFWTVNPEFCDNVTIKGITIDNAPS-PNTDGVNPESCRNVHISDCHISVGD 272
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
+ +KSG D + P NI + + + GV IG EMSG + VT+++
Sbjct: 273 DCITIKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVRKVTISN 326
>gi|260642326|ref|ZP_05415427.2| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260622463|gb|EEX45334.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 456
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP---------DCYIESGN 80
I + NSP T++P +C N +KG+T+ + S PNTDG++P DC+I G+
Sbjct: 215 IEGVKIINSPFWTVNPEFCDNVTIKGITIDNAPS-PNTDGVNPESCRNVHISDCHISVGD 273
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
+ +KSG D + P NI + + + GV IG EMSG + VT+++
Sbjct: 274 DCITIKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVRKVTISN 327
>gi|295084333|emb|CBK65856.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 430
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP---------DCYIESGN 80
I + NSP T++P +C N +KG+T+ + S PNTDG++P DC+I G+
Sbjct: 180 IEGVKIINSPFWTVNPEFCDNVTIKGITIDNAPS-PNTDGVNPESCRNVHISDCHISVGD 238
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
+ +KSG D + P NI + + + GV IG EMSG + VT+++
Sbjct: 239 DCITIKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVRKVTISN 292
>gi|59044767|gb|AAW84066.1| pectate lyase [uncultured bacterium]
Length = 471
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 19/131 (14%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R ++ N+LI +T NSP IHPV CRN V+ + + S PN DG +P
Sbjct: 216 YLRPQFIQPYRCENVLI-EGVTIRNSPMWEIHPVLCRNVIVQNVIINS--HGPNNDGCNP 272
Query: 73 ---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAV---RRVSGTTPTCSGVGI 120
DC ++G+ +A+KSG + DG + P+ NI V R G G+ +
Sbjct: 273 ESCTDVLIKDCDFDTGDDCIAIKSGRNADGRRLKAPTENIIVTGCRMKDGH----GGITV 328
Query: 121 GREMSGRIFNV 131
G E+SG + N+
Sbjct: 329 GSEISGGVRNL 339
>gi|423298602|ref|ZP_17276658.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
gi|392662345|gb|EIY55906.1| hypothetical protein HMPREF1070_05323 [Bacteroides ovatus
CL03T12C18]
Length = 446
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP---------DCYIESGN 80
I + NSP T++P +C N +KG+T+ + S PNTDG++P DC+I G+
Sbjct: 205 IEGVKIINSPFWTVNPEFCDNVTIKGITIDNAPS-PNTDGVNPESCRNVHISDCHISVGD 263
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
+ +KSG D + P NI + + + GV IG EMSG + VT+++
Sbjct: 264 DCITIKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVRKVTISN 317
>gi|408369670|ref|ZP_11167450.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
gi|407744724|gb|EKF56291.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
Length = 454
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 16/145 (11%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R ++ S NIL+ +T NSP IHP +N +K +TV + N DG+DP+
Sbjct: 206 RPQFIQFNRSENILL-QGVTITNSPFWVIHPYLSKNVSIKEVTVFA--HGHNNDGVDPEM 262
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C + G+ +AVKSG + D +A P+ NI ++ + IG E+S
Sbjct: 263 SQNIIIENCTFDQGDDAIAVKSGRNQDAWRLATPAKNIVIKNCK-IINGHQLMAIGSELS 321
Query: 126 GRIFNVTVNHLDVWMQQQGSYKDRL 150
G I N+ +++ V +QG+ + L
Sbjct: 322 GGIENIYMSNCQV---EQGAKLNHL 343
>gi|281421112|ref|ZP_06252111.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
gi|281404647|gb|EFB35327.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
Length = 524
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 7 WNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPN 66
WN + R ++ L+N N+ + + + F NSP+ IHP+ C N ++ + V +P A N
Sbjct: 218 WNEIKRFLRPVMISLVNCKNVWL-NGVIFQNSPAWNIHPLMCENVLIEDVLVRNPSYAQN 276
Query: 67 TDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSG 117
DGLD + + G+ + +KSG D DG P N+ V + G
Sbjct: 277 GDGLDLESCKNALIVNSTFDVGDDGICIKSGKDADGRKRGIPCENVIVNGCT-VFKGHGG 335
Query: 118 VGIGREMSGRIFNVTV 133
+G EMSG + N+ V
Sbjct: 336 FVVGSEMSGGVKNIKV 351
>gi|386819253|ref|ZP_10106469.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386424359|gb|EIJ38189.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 468
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 62/128 (48%), Gaps = 13/128 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R E NIL+ ++TF N+P +HP+ N V G+TV S PN DG DP+
Sbjct: 216 RPTFFEPFECENILV-KDVTFTNAPFWVMHPIKSVNITVDGVTVRS--HGPNNDGCDPEY 272
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C ++G+ +A+KSG + DG + PS NI V GV +G E+S
Sbjct: 273 SKNVHIKNCLFDTGDDCIAIKSGRNDDGRRVNIPSENIVVENCE-MKDGHGGVVMGSEIS 331
Query: 126 GRIFNVTV 133
+ NV V
Sbjct: 332 AGVRNVYV 339
>gi|357452825|ref|XP_003596689.1| Exo-poly-alpha-D-galacturonosidase [Medicago truncatula]
gi|355485737|gb|AES66940.1| Exo-poly-alpha-D-galacturonosidase [Medicago truncatula]
Length = 238
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 6/71 (8%)
Query: 19 VELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDCYIES 78
+E MNS N+LI SN+TF NSP T+H VYC + V+ +T+L+P PNTDG+D I
Sbjct: 166 IESMNSKNVLI-SNVTFLNSPFWTMHHVYCSHVTVQNVTILAPFGLPNTDGIDSYSLI-- 222
Query: 79 GNGLVAVKSGW 89
+ A+K+G+
Sbjct: 223 ---MYALKTGY 230
>gi|333382495|ref|ZP_08474165.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828806|gb|EGK01498.1| hypothetical protein HMPREF9455_02331 [Dysgonomonas gadei ATCC
BAA-286]
Length = 545
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 11/138 (7%)
Query: 7 WNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPN 66
W R +V + N+L+ + F NSPS IHP+ C N + + V +P A N
Sbjct: 220 WMEIKDFLRPVMVSFIECKNVLL-EGVLFENSPSWNIHPLMCENVILDNVMVRNPGYAQN 278
Query: 67 TDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSG 117
DGLD + + G+ + +KSG D DG RP+ N+ + G
Sbjct: 279 GDGLDLESCKNSIIVNSIFDVGDDAICIKSGKDEDGRRRNRPTENVLIDNCK-VFQGHGG 337
Query: 118 VGIGREMSGRIFNVTVNH 135
+G EMSG + N+ V++
Sbjct: 338 FVVGSEMSGSVRNILVSN 355
>gi|374312327|ref|YP_005058757.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358754337|gb|AEU37727.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 543
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 14/141 (9%)
Query: 18 LVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD------ 71
++EL N+ I +T N+P T+ PV C ++G+ V +P+ APNTDG+D
Sbjct: 176 MIELARCRNVRI-EGVTLTNAPGWTLRPVACETVLIRGIRVRNPIYAPNTDGMDITACRN 234
Query: 72 ---PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 128
DC I +G+ + +KS + + P+ NI V +T C+G +G GR+
Sbjct: 235 VFVSDCDIATGDDAICIKSENPYGELL---PTKNITVTNCVLST-CCNGFKVGTSTHGRV 290
Query: 129 FNVTVNHLDVWMQQQGSYKDR 149
N+ ++ ++ + +R
Sbjct: 291 ENIVFSNSVIYNESTTPLNER 311
>gi|332666314|ref|YP_004449102.1| polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
gi|332335128|gb|AEE52229.1| Polygalacturonase [Haliscomenobacter hydrossis DSM 1100]
Length = 778
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 11/129 (8%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R ++V L + +L+ +TF NSP+ TIHP+ C + ++ + V +P N D LD +
Sbjct: 448 RPNMVSLSRCTQVLL-EGITFQNSPAWTIHPLLCEHITLRDVIVRNPWYGQNNDALDLES 506
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C ++G+ + +KSG D +G P+ NI VR + G IG EMS
Sbjct: 507 CRNGLVEGCSFDTGDDGICIKSGRDAEGRKRGVPTENIIVRNCT-VFHGHGGFVIGSEMS 565
Query: 126 GRIFNVTVN 134
G + N+ V+
Sbjct: 566 GGVRNLFVS 574
>gi|198277233|ref|ZP_03209764.1| hypothetical protein BACPLE_03445 [Bacteroides plebeius DSM 17135]
gi|198269731|gb|EDY94001.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 478
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 11/136 (8%)
Query: 7 WNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPN 66
WN R L+ L N+L+ +TF NSPS +HP+ C + + G+ V +P + N
Sbjct: 183 WNEIRPWLRPVLLSLAKCKNVLL-KGVTFKNSPSWCLHPLSCEHITIDGVKVFNPWYSQN 241
Query: 67 TDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSG 117
D LD + ++G+ + +KSG D DG P N+ V+ + G
Sbjct: 242 GDALDLESCTNALVINNVFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKN-NVVLHGHGG 300
Query: 118 VGIGREMSGRIFNVTV 133
+G EMSG + N+ V
Sbjct: 301 FVVGSEMSGGVKNIYV 316
>gi|423311776|ref|ZP_17289713.1| hypothetical protein HMPREF1058_00325 [Bacteroides vulgatus
CL09T03C04]
gi|392689891|gb|EIY83166.1| hypothetical protein HMPREF1058_00325 [Bacteroides vulgatus
CL09T03C04]
Length = 446
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 14/140 (10%)
Query: 7 WNSTL--KHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSA 64
W+ TL + R + + N+ + + NSP T++P +C N +KG+T+ + + +
Sbjct: 184 WHGTLDRRFFRPPFIHPIRCKNVRV-EGVKIINSPFWTVNPEFCDNVTIKGITIHN-VPS 241
Query: 65 PNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 115
PNTDG++P DC+I G+ + +KSG D + P NI + + +
Sbjct: 242 PNTDGINPESCKNVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGH- 300
Query: 116 SGVGIGREMSGRIFNVTVNH 135
GV IG EMSG + VT+++
Sbjct: 301 GGVVIGSEMSGGVKKVTISN 320
>gi|257867957|ref|ZP_05647610.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC30]
gi|257874287|ref|ZP_05653940.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC10]
gi|257802040|gb|EEV30943.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC30]
gi|257808451|gb|EEV37273.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC10]
Length = 438
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 19/145 (13%)
Query: 6 WWNS------TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
WW + L + R L+ +S + + ++ +SPS T++P+ C++ + + +
Sbjct: 115 WWKTFRENREQLAYPRPKLISF-DSCQQITLKDIRLVDSPSWTVNPILCQDLTIDNLRIK 173
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG+DP+ C+I+ G+ +A+KSG + +A NI +
Sbjct: 174 NPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKSGTEDTKERVA--CENITIVNCH- 230
Query: 111 TTPTCSGVGIGREMSGRIFNVTVNH 135
V +G EMSG I NVT+++
Sbjct: 231 MLHGHGAVVLGSEMSGDIRNVTISN 255
>gi|257876852|ref|ZP_05656505.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC20]
gi|257811018|gb|EEV39838.1| galacturan 1,4-alpha-galacturonidase [Enterococcus casseliflavus
EC20]
Length = 438
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 19/145 (13%)
Query: 6 WWNS------TLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
WW + L + R L+ +S + + ++ +SPS T++P+ C++ + + +
Sbjct: 115 WWKTFRENREQLAYPRPKLISF-DSCQQITLKDIRLVDSPSWTVNPILCQDLTIDNLRIK 173
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P +PNTDG+DP+ C+I+ G+ +A+KSG + +A NI +
Sbjct: 174 NPADSPNTDGIDPESCKNVRISNCHIDVGDDCIAIKSGTEDTKERVA--CENITIVNCH- 230
Query: 111 TTPTCSGVGIGREMSGRIFNVTVNH 135
V +G EMSG I NVT+++
Sbjct: 231 MLHGHGAVVLGSEMSGDIRNVTISN 255
>gi|150005260|ref|YP_001300004.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|149933684|gb|ABR40382.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
Length = 446
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 14/140 (10%)
Query: 7 WNSTL--KHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSA 64
W+ TL + R + + N+ + + NSP T++P +C N +KG+T+ + + +
Sbjct: 184 WHGTLDRRFFRPPFIHPIRCKNVRV-EGVKIINSPFWTVNPEFCDNVTIKGITIHN-VPS 241
Query: 65 PNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 115
PNTDG++P DC+I G+ + +KSG D + P NI + + +
Sbjct: 242 PNTDGINPESCKNVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGH- 300
Query: 116 SGVGIGREMSGRIFNVTVNH 135
GV IG EMSG + VT+++
Sbjct: 301 GGVVIGSEMSGGVKKVTISN 320
>gi|372223095|ref|ZP_09501516.1| glycoside hydrolase family protein [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 472
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 96/233 (41%), Gaps = 54/233 (23%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R +E N+LI ++T N+P +HP+ N V G+TV S PN DG DP+
Sbjct: 218 RPTFIEPFGCENVLI-KDITIINAPFWVVHPIKSNNVVVDGITVDS--HGPNNDGCDPEY 274
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C +G+ +A+KSG + DG + PS NI V GV +G E+S
Sbjct: 275 AKNVWIKNCVFNTGDDCIAIKSGRNEDGRRVNIPSENIVVEDCK-MIDGHGGVVMGSEIS 333
Query: 126 -------------------------------GRIFNVTVNHLDVWMQQQGSYKDRLR--L 152
G + NV V +++V ++ K L +
Sbjct: 334 AGVRNVFVQNCQMDSPNLDRAIRIKTNTKRGGFVENVYVRNINVGQVKEAVLKINLHYGI 393
Query: 153 YGHPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
YG K + +PK+S + N+ N K G++ +EE +KNV L
Sbjct: 394 YGVQKGSF----MPKVSNVYLENIAVDNGGK----YGVLVNGYEESPVKNVFL 438
>gi|82524094|emb|CAJ19131.1| putative endopolygalacturonase [unidentified microorganism]
Length = 448
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R HL++L I I ++ NSP IH + N ++ + + L N DG+DP
Sbjct: 185 YLRPHLIQLYGCERI-TIEDVFITNSPFWCIHLLQSENAILRSIRFDAKLV--NNDGIDP 241
Query: 73 ---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
D + +G+ VA+KSG DHDG A PS NI +R V +G E
Sbjct: 242 EMSRNVLIEDVHFNNGDDNVAIKSGRDHDGRGTACPSENIIIRNCH--FKGLHAVVLGSE 299
Query: 124 MSGRIFNVTVNHLD 137
MS I NV V + D
Sbjct: 300 MSAGIQNVYVENCD 313
>gi|297827255|ref|XP_002881510.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297327349|gb|EFH57769.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 153
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 153 YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL-LVQAP 210
YG HP E +DPKA+P I I++ ++V+ N T LAGI G QF IC+ NV++ L + P
Sbjct: 34 YGSHPDEHYDPKALPVIQNINYQDMVAENVTMPAQLAGISGDQFTGICISNVTITLSKKP 93
Query: 211 -SVKWQCRFVSGF 222
V W C VSG+
Sbjct: 94 KKVLWNCTDVSGY 106
>gi|294777094|ref|ZP_06742551.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|319643453|ref|ZP_07998076.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345517811|ref|ZP_08797274.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|254836521|gb|EET16830.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|294448963|gb|EFG17506.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|317384858|gb|EFV65814.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 446
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 11/115 (9%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP---------DCYIESGN 80
+ + NSP T++P +C N +KG+T+ + + +PNTDG++P DC+I G+
Sbjct: 208 VEGVKIINSPFWTVNPEFCDNVTIKGITIHN-VPSPNTDGINPESCKNVHISDCHISVGD 266
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
+ +KSG D + P NI + + + GV IG EMSG + VT+++
Sbjct: 267 DCITIKSGRDLQARKLGVPCENITITNCTMLSGH-GGVVIGSEMSGGVKKVTISN 320
>gi|345516133|ref|ZP_08795626.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|423227918|ref|ZP_17214324.1| hypothetical protein HMPREF1063_00144 [Bacteroides dorei
CL02T00C15]
gi|423239050|ref|ZP_17220166.1| hypothetical protein HMPREF1065_00789 [Bacteroides dorei
CL03T12C01]
gi|423243178|ref|ZP_17224254.1| hypothetical protein HMPREF1064_00460 [Bacteroides dorei
CL02T12C06]
gi|229434099|gb|EEO44176.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|392637665|gb|EIY31531.1| hypothetical protein HMPREF1063_00144 [Bacteroides dorei
CL02T00C15]
gi|392646053|gb|EIY39772.1| hypothetical protein HMPREF1064_00460 [Bacteroides dorei
CL02T12C06]
gi|392647461|gb|EIY41162.1| hypothetical protein HMPREF1065_00789 [Bacteroides dorei
CL03T12C01]
Length = 446
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 14/140 (10%)
Query: 7 WNSTL--KHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSA 64
W+ TL + R + + N+ + + NSP T++P +C N +KG+T+ + + +
Sbjct: 184 WHGTLDRRFFRPPFIHPIRCKNVRV-EGVKIINSPFWTVNPEFCDNVTIKGITIHN-VPS 241
Query: 65 PNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 115
PNTDG++P DC+I G+ + +KSG D + P NI + + +
Sbjct: 242 PNTDGINPESCKNVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGH- 300
Query: 116 SGVGIGREMSGRIFNVTVNH 135
GV IG EMSG + VT+++
Sbjct: 301 GGVVIGSEMSGGVKKVTISN 320
>gi|212694786|ref|ZP_03302914.1| hypothetical protein BACDOR_04320 [Bacteroides dorei DSM 17855]
gi|265750531|ref|ZP_06086594.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|212662640|gb|EEB23214.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|263237427|gb|EEZ22877.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
Length = 446
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 14/140 (10%)
Query: 7 WNSTL--KHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSA 64
W+ TL + R + + N+ + + NSP T++P +C N +KG+T+ + + +
Sbjct: 184 WHGTLDRRFFRPPFIHPIRCKNVRV-EGVKIINSPFWTVNPEFCDNVTIKGITIHN-VPS 241
Query: 65 PNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 115
PNTDG++P DC+I G+ + +KSG D + P NI + + +
Sbjct: 242 PNTDGINPESCKNVHISDCHISVGDDCITIKSGRDLQARKLGVPCENITITNCTMLSGH- 300
Query: 116 SGVGIGREMSGRIFNVTVNH 135
GV IG EMSG + VT+++
Sbjct: 301 GGVVIGSEMSGGVKKVTISN 320
>gi|86143268|ref|ZP_01061670.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
gi|85830173|gb|EAQ48633.1| exo-poly-alpha-D-galacturonosidase precursor [Leeuwenhoekiella
blandensis MED217]
Length = 547
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 11/127 (8%)
Query: 18 LVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC--- 74
+V L++ NIL+ TF NSP+ IHP+ +N V+ +TV +P A N DGLD +
Sbjct: 224 MVSLVDCENILL-DGPTFQNSPAWNIHPLMSKNIIVRNLTVRNPWYAQNGDGLDLESCEN 282
Query: 75 ------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 128
+ G+ + +KSG + DG P+ N+ ++ + G +G EMSG +
Sbjct: 283 VLVYNNTFDVGDDAICIKSGKNEDGRKRNMPTQNVIIKN-NTVYHGHGGFVVGSEMSGGV 341
Query: 129 FNVTVNH 135
+ ++H
Sbjct: 342 SKIHISH 348
>gi|408369543|ref|ZP_11167324.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
gi|407745289|gb|EKF56855.1| glycoside hydrolase [Galbibacter sp. ck-I2-15]
Length = 466
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 13/130 (10%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
H R E S N+LI +TF N+P +HP+ C N V G+ V+S PN DG +P
Sbjct: 212 HLRPTFFEPFESENVLI-KGVTFINAPFWVMHPIKCTNVTVDGVKVIS--HGPNNDGCNP 268
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+ C ++G+ +A+KSG + +G + S NI V GV +G E
Sbjct: 269 EYSKNVHITNCVFDTGDDCIAIKSGRNDEGRRVGIVSENIVVENCI-MKDGHGGVVMGSE 327
Query: 124 MSGRIFNVTV 133
+S + NV V
Sbjct: 328 ISAGVRNVYV 337
>gi|399024363|ref|ZP_10726403.1| endopolygalacturonase [Chryseobacterium sp. CF314]
gi|398080600|gb|EJL71406.1| endopolygalacturonase [Chryseobacterium sp. CF314]
Length = 467
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R + V+ S N ++++ NSP ++PV C N ++ + V+S PN DG DP
Sbjct: 212 YLRPNFVQPYKSKN-FYMADVLVKNSPMWNLNPVLCENVLIERVKVIS--HGPNNDGFDP 268
Query: 73 ---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
D Y ++G+ +A+KSG D DG + +P+ N + GV IG E
Sbjct: 269 EACKNVWIKDSYFDTGDDCIAIKSGRDEDGRGIGKPAENHIIENCE-MKDGHGGVVIGSE 327
Query: 124 MSGRIFNV 131
++G N+
Sbjct: 328 IAGGAKNI 335
>gi|408672530|ref|YP_006872278.1| glycoside hydrolase family 28 [Emticicia oligotrophica DSM 17448]
gi|387854154|gb|AFK02251.1| glycoside hydrolase family 28 [Emticicia oligotrophica DSM 17448]
Length = 789
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 11/128 (8%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R +++ L NI II +TF NSP+ T+HP+ C + VK + V +P A N+D +D +
Sbjct: 459 RPNMLSLTRCKNI-IIEGVTFQNSPAWTMHPLLCEHITVKNVNVSNPWYAQNSDAIDLES 517
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C +G+ + +KSG D G P+ N ++ G IG EMS
Sbjct: 518 CRNGVLEGCTFSTGDDGITIKSGRDEQGRKRGVPTENFVIKDCI-VYHAHGGFVIGSEMS 576
Query: 126 GRIFNVTV 133
G + N+ +
Sbjct: 577 GGVRNMFI 584
>gi|393781893|ref|ZP_10370086.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
gi|392674779|gb|EIY68222.1| hypothetical protein HMPREF1071_00954 [Bacteroides salyersiae
CL02T12C01]
Length = 509
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 7 WNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPN 66
W S R +V L+ N+ + + F NSP+ +HP+ C N ++ + V +P A N
Sbjct: 218 WQSVRHFLRPVMVSLIECKNVWL-QGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQN 276
Query: 67 TDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSG 117
DGLD + + G+ + +KSG D DG AR N+ V + G
Sbjct: 277 GDGLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRARSCENVVVDGCT-VFKGHGG 335
Query: 118 VGIGREMSGRIFNVTVNH 135
+G EMSG + NV+V++
Sbjct: 336 FVVGSEMSGGVRNVSVSN 353
>gi|254785604|ref|YP_003073033.1| glycoside hydrolase family 28 domain-containing protein
[Teredinibacter turnerae T7901]
gi|237685733|gb|ACR12997.1| glycoside hydrolase family 28 domain protein [Teredinibacter
turnerae T7901]
Length = 467
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 38/213 (17%)
Query: 28 LIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYIES 78
+++ ++T N+P +HPV C N + + + S PN+DG +P+ C+ ++
Sbjct: 227 VLLEDVTIINAPFWLVHPVLCDNVTARRLHLQS--LGPNSDGCNPESCRNVLIEHCFFDT 284
Query: 79 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSG------------ 126
G+ +A+KSG + DG + PS NI +R GV IG E+SG
Sbjct: 285 GDDCIAIKSGRNADGRRLNIPSENIVIRHCE-MRAGHGGVVIGSEISGGVRNVYAHDNRM 343
Query: 127 ------RIFNVTVNHL------DVWMQ--QQGSYKDRLRLYGHPKEGWDPKAIPKISGIS 172
R F + N + +++++ Q G KD + + H +EG K P + I+
Sbjct: 344 SSPDLERGFRIKTNSVRGGLIENIYLRDIQIGQVKDAIVINFHYEEGDAGKFDPTVRNIN 403
Query: 173 FVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
N+ + + + G +++ + N +
Sbjct: 404 LDNISCEHAQQVFQIRGFDRAPIKQLSITNSTF 436
>gi|379723469|ref|YP_005315600.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
3016]
gi|386726203|ref|YP_006192529.1| glycoside hydrolase [Paenibacillus mucilaginosus K02]
gi|378572141|gb|AFC32451.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus 3016]
gi|384093328|gb|AFH64764.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
K02]
Length = 530
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 11/137 (8%)
Query: 7 WNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPN 66
+ + + R +L+ L +L+ TF NSP+ +HP C + ++G+TV +P N
Sbjct: 198 YEAARDYLRPNLLSLRRCKYVLL-EGATFQNSPAWNLHPWACEHVTLRGVTVRNPWYGQN 256
Query: 67 TDGLD---------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSG 117
DGLD DC + G+ + +KSG D G A+ P +I +R G
Sbjct: 257 GDGLDLDSCRYGLVEDCSFDVGDDAICIKSGKDEAGRALGIPCEDILIRNCR-VYHGHGG 315
Query: 118 VGIGREMSGRIFNVTVN 134
IG EMSG + + V
Sbjct: 316 FVIGSEMSGGVRRLRVE 332
>gi|393781526|ref|ZP_10369720.1| hypothetical protein HMPREF1071_00588 [Bacteroides salyersiae
CL02T12C01]
gi|392676130|gb|EIY69568.1| hypothetical protein HMPREF1071_00588 [Bacteroides salyersiae
CL02T12C01]
Length = 447
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP---------DCYIESGN 80
I + NSP T++P +C N V G+T+ + + +PNTDG++P DC+I G+
Sbjct: 206 IEGVKIINSPFWTVNPEFCDNVVVTGVTIHN-VPSPNTDGINPESCRNVHISDCHISVGD 264
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
+ +KSG D + P NI + + + GV IG EMSG + VT+++
Sbjct: 265 DCITLKSGRDAQARRLGVPCENITITNCTMLSGH-GGVVIGSEMSGSVRKVTISN 318
>gi|325106419|ref|YP_004276073.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324975267|gb|ADY54251.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 554
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 11/144 (7%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+ D W S R +V N+ + + F NSP+ IHP+ C N + G+ V +
Sbjct: 210 FKTDEEWQSVRDFLRPVMVSFRECKNVYL-QGVIFQNSPAWNIHPLMCENVIIDGIQVRN 268
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P A N DGLD + + G+ + +KSG + DG P N+ V +
Sbjct: 269 PSYAQNGDGLDLESCKNVIVVNSSFDVGDDGICLKSGKNEDGRKRGMPCENVIVDNCT-V 327
Query: 112 TPTCSGVGIGREMSGRIFNVTVNH 135
G +G EMSG + N++V +
Sbjct: 328 FKGHGGFVVGSEMSGGVRNISVTN 351
>gi|315606960|ref|ZP_07881966.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
gi|315251341|gb|EFU31324.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
Length = 459
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP-- 72
R L++L N+ I + NSP IH + N +G+ + L N DG+DP
Sbjct: 197 RPQLIQLFGCRNV-TIEGVKIINSPFWCIHLLQSENVICRGLRYDAKLV--NNDGIDPES 253
Query: 73 -------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
D ++G+ VA+KSG D+DG A PS NI +RR V IG EMS
Sbjct: 254 SRNVLIEDVSFDNGDDNVAIKSGRDNDGWTHAHPSENIIIRRCR--FKGLHAVVIGSEMS 311
Query: 126 GRIFNVTVNHLD 137
G + NV V D
Sbjct: 312 GGVRNVFVEDCD 323
>gi|29349531|ref|NP_813034.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341440|gb|AAO79228.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 528
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 4 DLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
D W R ++ ++ S IL+ +TF NSP IHP+ C + + + V +P
Sbjct: 227 DEEWTYMKSWLRPVMLSIVKSKRILL-EGVTFKNSPGWCIHPLSCESLTLNDVKVFNPWY 285
Query: 64 APNTDGLD---------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+ N D LD +C+ ++G+ + +KSG D DG P N+ ++ +
Sbjct: 286 SQNGDALDVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVIIKN-NTVLHG 344
Query: 115 CSGVGIGREMSGRIFNVTV 133
G IG EMSG + NV V
Sbjct: 345 HGGFVIGSEMSGGVRNVYV 363
>gi|410636673|ref|ZP_11347265.1| polygalacturonase, putative, pga28A [Glaciecola lipolytica E3]
gi|410143760|dbj|GAC14470.1| polygalacturonase, putative, pga28A [Glaciecola lipolytica E3]
Length = 476
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 100/229 (43%), Gaps = 39/229 (17%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R ++ + N+LI +T NSP ++PV C N V+G+ S PN+DG DP
Sbjct: 224 YLRPPFIQPIRCKNVLI-EGVTIKNSPFWLVNPVLCENVTVQGIHCES--YGPNSDGCDP 280
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+ C ++G+ +A+KSG + DG + S NI + GV IG E
Sbjct: 281 EACKDVLIQNCIFDTGDDCIAIKSGRNADGRRVGVASENILIENCQ-MKAGHGGVVIGSE 339
Query: 124 MSGRIFNVTVNH-------LDVWMQQQ-------------------GSYKDRLRLYGHPK 157
+SG + N+ V++ LD ++ + G KD + + + +
Sbjct: 340 ISGGVRNLYVDNCEMSSPDLDRGIRIKTNSIRGGHLKNLNYRNINIGQVKDAIVINFYYE 399
Query: 158 EGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLL 206
EG K P + I N+ + T+A L G T + +KN++ +
Sbjct: 400 EGDVGKFTPVLEDIRIENLWVEHATRAFSLRGYPHTPITGVTLKNLTFV 448
>gi|402307601|ref|ZP_10826623.1| pectate lyase family protein [Prevotella sp. MSX73]
gi|400378313|gb|EJP31171.1| pectate lyase family protein [Prevotella sp. MSX73]
Length = 471
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP-- 72
R L++L N+ I + NSP IH + N +G+ + L N DG+DP
Sbjct: 209 RPQLIQLFGCRNV-TIEGVKIINSPFWCIHLLQSENVICRGLRYDAKLV--NNDGIDPES 265
Query: 73 -------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
D ++G+ VA+KSG D+DG A PS NI +RR V IG EMS
Sbjct: 266 SRNVLIEDVSFDNGDDNVAIKSGRDNDGWTHAHPSENIIIRRCR--FKGLHAVVIGSEMS 323
Query: 126 GRIFNVTVNHLD 137
G + NV V D
Sbjct: 324 GGVRNVFVEDCD 335
>gi|383642336|ref|ZP_09954742.1| glycoside hydrolase family 28 [Sphingomonas elodea ATCC 31461]
Length = 489
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 13/129 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP-- 72
R HL++ N+L+ +++ SP T+HP+ CR+ ++ +++ + N DG+DP
Sbjct: 212 RPHLIQFNRCRNVLV-EDISIRGSPFWTLHPLLCRDVTIRRVSIQA--HGHNNDGVDPEM 268
Query: 73 -------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
DC + G+ V+VKSG D D +A P N+ VR + +G E+S
Sbjct: 269 SQNVLIEDCVFDQGDDAVSVKSGRDMDAWRLATPCRNVVVRNCR-VLNGHQLMAVGSELS 327
Query: 126 GRIFNVTVN 134
G I N+ V+
Sbjct: 328 GGIENIWVD 336
>gi|326797927|ref|YP_004315746.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326548691|gb|ADZ77076.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 455
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 13/131 (9%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
H R ++ S N+L+ ++ NSP TIH +N ++ + V + N DG+DP
Sbjct: 205 HLRPQFIQFNRSENVLL-EGISITNSPFWTIHTYLSKNIIIRNLNVYA--HGHNNDGVDP 261
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+ C + G+ +A+KSG + +G + PS NI +R + + IG E
Sbjct: 262 EMSQNVLIENCVFDQGDDAIAIKSGRNPEGWRLKAPSKNIIIRNCT-VKNGHQLIAIGSE 320
Query: 124 MSGRIFNVTVN 134
+SG I NV V+
Sbjct: 321 LSGGIENVFVD 331
>gi|383120469|ref|ZP_09941197.1| hypothetical protein BSIG_2521 [Bacteroides sp. 1_1_6]
gi|382985005|gb|EES68560.2| hypothetical protein BSIG_2521 [Bacteroides sp. 1_1_6]
Length = 528
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 4 DLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
D W R ++ ++ S IL+ +TF NSP IHP+ C + + + V +P
Sbjct: 227 DEEWTYMKSWLRPVMLSIVKSKRILL-EGVTFKNSPGWCIHPLSCESLTLNDVKVFNPWY 285
Query: 64 APNTDGLD---------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+ N D LD +C+ ++G+ + +KSG D DG P N+ ++ +
Sbjct: 286 SQNGDALDVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVIIKN-NTVLHG 344
Query: 115 CSGVGIGREMSGRIFNVTV 133
G IG EMSG + NV V
Sbjct: 345 HGGFVIGSEMSGGVRNVYV 363
>gi|288925897|ref|ZP_06419827.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288337321|gb|EFC75677.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 459
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP-- 72
R L++L N+ I + NSP IH + N +G+ + L N DG+DP
Sbjct: 197 RPQLIQLFGCRNV-TIEGVKIINSPFWCIHLLQSENVICRGLRYDAKLV--NNDGIDPES 253
Query: 73 -------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
D ++G+ VA+KSG D+DG A PS NI +RR V IG EMS
Sbjct: 254 SRNVLIEDVSFDNGDDNVAIKSGRDNDGWTHAHPSENIIIRRCR--FKGLHAVVIGSEMS 311
Query: 126 GRIFNVTVNHLD 137
G + NV V D
Sbjct: 312 GGVRNVFVEDCD 323
>gi|423301929|ref|ZP_17279952.1| hypothetical protein HMPREF1057_03093 [Bacteroides finegoldii
CL09T03C10]
gi|408471020|gb|EKJ89552.1| hypothetical protein HMPREF1057_03093 [Bacteroides finegoldii
CL09T03C10]
Length = 546
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 4 DLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
D WN R L+ + S IL+ +TF NSPS +HP+ C + V + V++P
Sbjct: 227 DEEWNEIRPWLRPVLLSIAKSKKILL-EGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWY 285
Query: 64 APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+ N D +D + ++G+ + +KSG D DG P N+ V+ +
Sbjct: 286 SQNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHG 344
Query: 115 CSGVGIGREMSGRIFNVTV 133
G +G EMSG + N+ V
Sbjct: 345 HGGFVVGSEMSGGVKNIYV 363
>gi|329964701|ref|ZP_08301755.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328525101|gb|EGF52153.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 506
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 7 WNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPN 66
W S R +V L+ N+ + + F NSP+ +HP+ C N V+ + V +P A N
Sbjct: 219 WQSVRHFLRPVMVSLIECRNVWL-QGVIFQNSPAWNLHPLMCENVLVEEVQVRNPSYAQN 277
Query: 67 TDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSG 117
DGLD + + G+ + +KSG D DG AR N+ V + G
Sbjct: 278 GDGLDLESCRNALIVNSTFDVGDDGICLKSGKDEDGRRRARVCENVVVDGCT-VFKGHGG 336
Query: 118 VGIGREMSGRIFNVTVNH 135
+G EMSG + NV+V++
Sbjct: 337 FVVGSEMSGGVRNVSVSN 354
>gi|284005877|ref|YP_003391696.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
gi|283821061|gb|ADB42897.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 390
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 12/113 (10%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W + +S R L+ L S N+ I LT NSPS + P C+N ++ +T+ +P
Sbjct: 118 WQRFIDSGKTLNRPRLIYLTRSRNV-TIDGLTLINSPSFHLVPSQCQNVTIQNLTITAPS 176
Query: 63 SAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR 106
+PNTDG+DP +C I++G+ +A+K G + I +P +I +R
Sbjct: 177 DSPNTDGIDPANCTHVLIQNCTIDNGDDNIAIKGGRSNGQI--VQPCQDIQIR 227
>gi|402307012|ref|ZP_10826044.1| glycosyl hydrolase, family 88 [Prevotella sp. MSX73]
gi|400379233|gb|EJP32078.1| glycosyl hydrolase, family 88 [Prevotella sp. MSX73]
Length = 853
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 61/126 (48%), Gaps = 13/126 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R L+ M+ ILI ++ NSP IHP+ +N V + + + PN DG DP+
Sbjct: 210 RPQLINFMHCERILI-RDVKMVNSPFWVIHPLLSKNITVDNVYIWN--EGPNGDGCDPEA 266
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C +G+ +A+KSG ++DG +PS NI +R GV IG E+S
Sbjct: 267 CENVLIQNCTFHTGDDCIAIKSGRNNDGRLWGKPSKNIIIRNCK-MEDGHGGVVIGSEIS 325
Query: 126 GRIFNV 131
G NV
Sbjct: 326 GGCENV 331
>gi|288926468|ref|ZP_06420388.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288336759|gb|EFC75125.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 843
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 61/126 (48%), Gaps = 13/126 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R L+ M+ ILI ++ NSP IHP+ +N V + + + PN DG DP+
Sbjct: 200 RPQLINFMHCERILI-RDVKMVNSPFWVIHPLLSKNITVDNVYIWN--EGPNGDGCDPEA 256
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C +G+ +A+KSG ++DG +PS NI +R GV IG E+S
Sbjct: 257 CENVLIQNCTFHTGDDCIAIKSGRNNDGRLWGKPSKNIIIRNCK-MEDGHGGVVIGSEIS 315
Query: 126 GRIFNV 131
G NV
Sbjct: 316 GGCENV 321
>gi|293370067|ref|ZP_06616633.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|292634859|gb|EFF53382.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
Length = 461
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 19/131 (14%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD- 71
H R HL+ N+L+ C SP TIH C G V+ + V + N DG+D
Sbjct: 205 HLRPHLIHFNRCKNVLL-DGFKICESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDGIDF 261
Query: 72 --------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGI 120
DC + G+ V +K+G + D + P NI +R + G T +GI
Sbjct: 262 EMSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGHTL----LGI 317
Query: 121 GREMSGRIFNV 131
G E+SG I N+
Sbjct: 318 GSEISGGIRNI 328
>gi|315608643|ref|ZP_07883624.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
gi|315249682|gb|EFU29690.1| glycoside hydrolase [Prevotella buccae ATCC 33574]
Length = 873
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 61/126 (48%), Gaps = 13/126 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R L+ M+ ILI ++ NSP IHP+ +N V + + + PN DG DP+
Sbjct: 230 RPQLINFMHCERILI-RDVKMVNSPFWVIHPLLSKNITVDNVYIWN--EGPNGDGCDPEA 286
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C +G+ +A+KSG ++DG +PS NI +R GV IG E+S
Sbjct: 287 CENVLIQNCTFHTGDDCIAIKSGRNNDGRLWGKPSKNIIIRNCK-MEDGHGGVVIGSEIS 345
Query: 126 GRIFNV 131
G NV
Sbjct: 346 GGCENV 351
>gi|312130362|ref|YP_003997702.1| glycoside hydrolase [Leadbetterella byssophila DSM 17132]
gi|311906908|gb|ADQ17349.1| glycoside hydrolase family 28 [Leadbetterella byssophila DSM 17132]
Length = 775
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 11/130 (8%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R +++ + N+LI +TF NSP+ T+HP+ ++ ++ + V +P N D LD +
Sbjct: 448 RPNMISITECENVLI-EGVTFQNSPAWTLHPLLSKHITLRNVNVRNPWFGQNNDALDLES 506
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C ++G+ + +KSG D G P+ N+ ++ + G IG EMS
Sbjct: 507 CSYAIVDGCTFDTGDDAITLKSGRDEQGRKRGVPTENVIIKNTT-VFHGHGGFVIGSEMS 565
Query: 126 GRIFNVTVNH 135
G + NV V++
Sbjct: 566 GGVKNVFVDN 575
>gi|338211743|ref|YP_004655796.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
gi|336305562|gb|AEI48664.1| Exo-poly-alpha-galacturonosidase [Runella slithyformis DSM 19594]
Length = 781
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 11/130 (8%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R +++ L N+L+ +TF NSP+ T+HP+ C + ++ +TV + A N+D LD +
Sbjct: 451 RPNMISLTRCKNVLL-EGVTFQNSPAWTMHPLLCEHVSIRNVTVKNHWYAQNSDALDLES 509
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C ++G+ + +KSG D G P+ N ++ G IG EMS
Sbjct: 510 CRNGIVEGCTFDTGDDGITIKSGRDEQGRKRGVPTENFIIKDCK-VYHAHGGFVIGSEMS 568
Query: 126 GRIFNVTVNH 135
G + N+ V++
Sbjct: 569 GGVRNMFVSN 578
>gi|298383858|ref|ZP_06993419.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298263462|gb|EFI06325.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 538
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 4 DLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
D WN R L+ + S IL+ +TF NSPS +HP+ C + V + V++P
Sbjct: 227 DEEWNEIRAWLRPVLLSFVKSKKILL-EGVTFKNSPSWCLHPLSCEDFTVNNIQVINPWY 285
Query: 64 APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+ N D LD + ++G+ + +KSG D +G P N+ V+ +
Sbjct: 286 SQNGDALDLESCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKN-NTVLHG 344
Query: 115 CSGVGIGREMSGRIFNVTV 133
G +G EMSG + N+ V
Sbjct: 345 HGGFVVGSEMSGGVKNIYV 363
>gi|197105922|ref|YP_002131299.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
gi|196479342|gb|ACG78870.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
Length = 470
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R ++ +N+LI ++ SP +HPV CRN ++ + + S PN DG+DP
Sbjct: 212 YLRPPFIQPYRCTNVLI-EGVSLRRSPFWQVHPVLCRNVTIRRLDINS--HGPNNDGIDP 268
Query: 73 ---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
DC+ +G+ +A+ SG + DG + P N+ +R G+ IG +
Sbjct: 269 ESCDHVLIEDCFFSTGDDCIALNSGRNEDGRRVGVPCQNVVIRGCR-MADGHGGLTIGSQ 327
Query: 124 MSGRIFNV 131
+SG + NV
Sbjct: 328 ISGHVRNV 335
>gi|383120529|ref|ZP_09941257.1| hypothetical protein BSIG_2461 [Bacteroides sp. 1_1_6]
gi|382985024|gb|EES68500.2| hypothetical protein BSIG_2461 [Bacteroides sp. 1_1_6]
Length = 535
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 4 DLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
D WN R L+ + S IL+ +TF NSPS +HP+ C + V + V++P
Sbjct: 224 DEEWNEIRAWLRPVLLNFVKSKRILL-EGVTFKNSPSWCLHPLSCEDFTVNNIQVINPWY 282
Query: 64 APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+ N D LD + ++G+ + +KSG D +G P N+ V+ +
Sbjct: 283 SQNGDALDLESCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKN-NTVLHG 341
Query: 115 CSGVGIGREMSGRIFNVTV 133
G +G EMSG + N+ V
Sbjct: 342 HGGFVVGSEMSGGVKNIYV 360
>gi|410634542|ref|ZP_11345177.1| exo-poly-alpha-D-galacturonosidase [Glaciecola arctica BSs20135]
gi|410145928|dbj|GAC22044.1| exo-poly-alpha-D-galacturonosidase [Glaciecola arctica BSs20135]
Length = 477
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 44/217 (20%)
Query: 28 LIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYIES 78
++I +T NSP ++PV C+N V+ + S PN+DG DP+ C ++
Sbjct: 236 VLIEGVTIKNSPFWLVNPVLCKNVTVRNIHCDS--HGPNSDGCDPEACTDVLIENCIFDT 293
Query: 79 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV------- 131
G+ +A+KSG + DG + +P NI + + GV IG E+SG + N+
Sbjct: 294 GDDCIAIKSGRNADGRRVGQPCENILINNCQMRSGH-GGVVIGSEISGGVRNLYAQNCEM 352
Query: 132 ----------------------TVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKIS 169
+N+ D+ + G K+ + + + +EG K P +
Sbjct: 353 SSPDLDRGIRIKTNSIRGGHLKNLNYRDIRI---GQVKEAVVINFYYEEGDVGKFTPVLE 409
Query: 170 GISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLL 206
I+ N+ + T+A L G T + +KN+++L
Sbjct: 410 DINIENLYVEHATRAFSLRGYPHTPITGVSIKNLTIL 446
>gi|380693857|ref|ZP_09858716.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 525
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 11/128 (8%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD--- 71
R ++ ++ S IL+ +TF NSP IHP+ C + + + V +P + N D LD
Sbjct: 238 RPVMLSIVKSKRILL-EGVTFKNSPGWCIHPLSCESLTLNDVKVFNPWYSQNGDALDVES 296
Query: 72 ------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
+C+ ++G+ + +KSG D DG P N+ ++ + G IG EMS
Sbjct: 297 CKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGEPCENVIIKN-NTVLHGHGGFVIGSEMS 355
Query: 126 GRIFNVTV 133
G + NV V
Sbjct: 356 GGVRNVYV 363
>gi|29349595|ref|NP_813098.1| exo-poly-alpha-D-galacturonosidase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341505|gb|AAO79292.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 538
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 4 DLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
D WN R L+ + S IL+ +TF NSPS +HP+ C + V + V++P
Sbjct: 227 DEEWNEIRAWLRPVLLNFVKSKRILL-EGVTFKNSPSWCLHPLSCEDFTVNNIQVINPWY 285
Query: 64 APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+ N D LD + ++G+ + +KSG D +G P N+ V+ +
Sbjct: 286 SQNGDALDLESCKNALILNSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKN-NTVLHG 344
Query: 115 CSGVGIGREMSGRIFNVTV 133
G +G EMSG + N+ V
Sbjct: 345 HGGFVVGSEMSGGVKNIYV 363
>gi|116619802|ref|YP_821958.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222964|gb|ABJ81673.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 535
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 12/139 (8%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R V M S N+LI L F SP TIH +Y N V+ + ++ +TDG+ D
Sbjct: 187 RPSFVRTMESRNVLI-EGLQFVGSPMWTIHLLYSDNVVVRDV-IIETYPGVHTDGIAVDS 244
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
CYI++G+ + +K+G D DG+ + RP+ N+++ S V IG E S
Sbjct: 245 SRNVRISNCYIDTGDDGIVIKAGKDSDGLRVNRPTENVSITNCS-VHHAHGAVTIGSETS 303
Query: 126 GRIFNVTVNHLDVWMQQQG 144
G + N+ +++ Q G
Sbjct: 304 GWVRNLVASNITCDGTQMG 322
>gi|189468045|ref|ZP_03016830.1| hypothetical protein BACINT_04439 [Bacteroides intestinalis DSM
17393]
gi|189436309|gb|EDV05294.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 534
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 11/142 (7%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+ D WN R L+ ++ S +L+ +TF NSPS +HP+ C + + + V +
Sbjct: 223 IETDEEWNEIRPWLRPVLLNIVKSKRVLL-EGVTFKNSPSWCLHPLSCEHITIHNVKVFN 281
Query: 61 PLSAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P + N D LD + ++G+ + +KSG D DG P N+ V+ +
Sbjct: 282 PWYSQNGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKN-NTV 340
Query: 112 TPTCSGVGIGREMSGRIFNVTV 133
G +G EMSG + NV V
Sbjct: 341 LHGHGGFVVGSEMSGGVKNVYV 362
>gi|427387085|ref|ZP_18883141.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
gi|425725690|gb|EKU88559.1| hypothetical protein HMPREF9447_04174 [Bacteroides oleiciplenus YIT
12058]
Length = 534
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 11/142 (7%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+ D WN R L+ ++ S +L+ +TF NSPS +HP+ C + + + V +
Sbjct: 223 IETDEEWNEIRPWLRPVLLNIVKSKKVLL-EGVTFKNSPSWCLHPLSCEHITIHNVKVFN 281
Query: 61 PLSAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P + N D LD + ++G+ + +KSG D DG P N+ V+ +
Sbjct: 282 PWYSQNGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTV 340
Query: 112 TPTCSGVGIGREMSGRIFNVTV 133
G +G EMSG + NV V
Sbjct: 341 LHGHGGFVVGSEMSGGVKNVYV 362
>gi|224538252|ref|ZP_03678791.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|423221595|ref|ZP_17208065.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224520112|gb|EEF89217.1| hypothetical protein BACCELL_03143 [Bacteroides cellulosilyticus
DSM 14838]
gi|392645922|gb|EIY39642.1| hypothetical protein HMPREF1062_00251 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 534
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 4 DLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
D WN R L+ ++ S +L+ +TF NSPS +HP+ C + + + V +P
Sbjct: 226 DEEWNEIRPWLRPVLLNIVKSKKVLL-EGVTFKNSPSWCLHPLSCEHITIHNVKVFNPWY 284
Query: 64 APNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+ N D LD + ++G+ + +KSG D DG P N+ V+ +
Sbjct: 285 SQNGDALDLESCKNALIVNNIFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHG 343
Query: 115 CSGVGIGREMSGRIFNVTV 133
G +G EMSG + NV V
Sbjct: 344 HGGFVVGSEMSGGVKNVYV 362
>gi|408501393|ref|YP_006865312.1| galacturan 1,4-alpha-galacturonidase [Bifidobacterium asteroides
PRL2011]
gi|408466217|gb|AFU71746.1| galacturan 1,4-alpha-galacturonidase [Bifidobacterium asteroides
PRL2011]
Length = 437
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 10/124 (8%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYIESGN 80
+ +T NSP TIH VYC + G+TV +P +A NTD LD D + G+
Sbjct: 171 LKGITVQNSPFWTIHFVYCTQVTIDGVTVRNPANAINTDALDIDSSTNVAVSNSLFDVGD 230
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNHLDVWM 140
+ +KSG DG+ + +P++++ V+ + + G+ IG E +G I +V V
Sbjct: 231 DAITLKSGSGPDGLRVNKPTAHVNVKDCT-ILASHGGIAIGSETAGGINDVNVEKCTFSG 289
Query: 141 QQQG 144
Q+G
Sbjct: 290 TQRG 293
>gi|329962420|ref|ZP_08300420.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328529976|gb|EGF56864.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 532
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 4 DLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
D WN R L+ ++ S +L+ +TF NSPS +HP+ C + + + V +P
Sbjct: 224 DEEWNEIRPWLRPVLLNIVKSKKVLL-EGVTFKNSPSWCLHPLSCEHITINNVKVFNPWY 282
Query: 64 APNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+ N D LD + ++G+ + +KSG D DG P N+ V+ +
Sbjct: 283 SQNGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRRRGEPCQNVVVKD-NTVLHG 341
Query: 115 CSGVGIGREMSGRIFNVTV 133
G +G EMSG + N+ V
Sbjct: 342 HGGFVVGSEMSGGVKNIYV 360
>gi|225420387|ref|ZP_03762690.1| hypothetical protein CLOSTASPAR_06732 [Clostridium asparagiforme
DSM 15981]
gi|225040964|gb|EEG51210.1| hypothetical protein CLOSTASPAR_06732 [Clostridium asparagiforme
DSM 15981]
Length = 519
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 14/140 (10%)
Query: 6 WWNSTLKHT---RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WW++ + R V L NI ++ LT NSPS TIHP + + G+ VL+P
Sbjct: 209 WWHNCKEMKIAWRPRAVFLNGCENISLVG-LTVKNSPSWTIHPYFSNHLRFLGLNVLAPK 267
Query: 63 SAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+ NTDGLDP+ + G+ +AVKSG + G PS +I +R+ S
Sbjct: 268 DSHNTDGLDPESCRQVELAGIHFSVGDDCIAVKSGKIYMGKTYRTPSEHITIRQCSMNDG 327
Query: 114 TCSGVGIGREMSGRIFNVTV 133
S V IG E+ + ++TV
Sbjct: 328 HGS-VVIGSEIGAGVRDLTV 346
>gi|329957634|ref|ZP_08298109.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328522511|gb|EGF49620.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 533
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 11/142 (7%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+ D WN R L+ ++ S +L+ +TF NSPS +HP+ C + + + V +
Sbjct: 221 IETDEEWNEIRPWLRPVLLNIVKSKKVLL-EGVTFKNSPSWCLHPLSCEHITINQVKVFN 279
Query: 61 PLSAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P + N D LD + ++G+ + +KSG D DG P N+ V+ +
Sbjct: 280 PWYSQNGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKN-NTV 338
Query: 112 TPTCSGVGIGREMSGRIFNVTV 133
G +G EMSG + N+ V
Sbjct: 339 LHGHGGFVVGSEMSGGVKNIYV 360
>gi|329894082|ref|ZP_08270067.1| Glycoside hydrolase, family 77 [gamma proteobacterium IMCC3088]
gi|328923254|gb|EGG30574.1| Glycoside hydrolase, family 77 [gamma proteobacterium IMCC3088]
Length = 487
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 12/117 (10%)
Query: 28 LIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP---------DCYIES 78
+++ + N+P IHPV R+ ++G+ S PN+DG DP DC ++
Sbjct: 238 ILVEGIKITNAPFWLIHPVLSRDVTIRGVHCQS--YGPNSDGCDPESCERVVIEDCVFDT 295
Query: 79 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
G+ +A+KSG + DG + P ++ V+ GV IG E+SG + NV V H
Sbjct: 296 GDDCIALKSGRNADGRRIGVPCKDVVVQNCH-MKEGHGGVVIGSEISGGVANVHVRH 351
>gi|373955264|ref|ZP_09615224.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
gi|373891864|gb|EHQ27761.1| glycoside hydrolase family 28 [Mucilaginibacter paludis DSM 18603]
Length = 549
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 11/128 (8%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD--- 71
R ++V L N IL+ +TF NSP+ +HP C + ++G+ V +P A N DG+D
Sbjct: 218 RPNMVVLNNCKRILL-EGVTFQNSPAWNLHPFLCSDLTLRGVNVKNPWYAQNGDGIDLES 276
Query: 72 ------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
+ + G+ + +KSG D G + +P+ N+ VR G IG EMS
Sbjct: 277 STNTLIENSTFDVGDDGICIKSGRDEAGRKLGKPTENVIVRNCV-VYHAHGGFVIGSEMS 335
Query: 126 GRIFNVTV 133
G N+ V
Sbjct: 336 GGAKNIFV 343
>gi|86141279|ref|ZP_01059825.1| hypothetical protein MED217_04657 [Leeuwenhoekiella blandensis
MED217]
gi|85831838|gb|EAQ50293.1| hypothetical protein MED217_04657 [Leeuwenhoekiella blandensis
MED217]
Length = 483
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 62/128 (48%), Gaps = 13/128 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R +E + N+LI +TF N+P IHP+ + V G+TV S PN DG DP+
Sbjct: 231 RPLFLETLECENVLI-QGVTFTNAPFWVIHPLKSKYVTVDGVTVNS--HGPNNDGCDPEY 287
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C +G+ +A+KSG + DG + PS NI V GV +G E+S
Sbjct: 288 SKYVHITNCKFNTGDDCIAIKSGRNGDGRRVNIPSENIVVENCD-MKDGHGGVVMGSEIS 346
Query: 126 GRIFNVTV 133
+ NV V
Sbjct: 347 AGVRNVFV 354
>gi|325842985|ref|ZP_08167837.1| polygalacturonase (pectinase) [Turicibacter sp. HGF1]
gi|325489511|gb|EGC91879.1| polygalacturonase (pectinase) [Turicibacter sp. HGF1]
Length = 415
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 11/130 (8%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R L ++++S ++ + +T NSPS T+HP++ + + +++P +PNTDGLDP+
Sbjct: 110 RPRLFQIIHSHHVNV-QGITLQNSPSWTVHPLFSDDLKFIDLKIINPKDSPNTDGLDPES 168
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
+ G+ +A+KSG + G + R S I +R S V IG EM+
Sbjct: 169 CHRVLILGVHFSVGDDCIAIKSGKIYLGSRLKRASEYITIRNCSMNFGH-GAVVIGSEMA 227
Query: 126 GRIFNVTVNH 135
G + ++ V
Sbjct: 228 GGVKHILVEQ 237
>gi|293375683|ref|ZP_06621956.1| polygalacturonase (pectinase) [Turicibacter sanguinis PC909]
gi|292645734|gb|EFF63771.1| polygalacturonase (pectinase) [Turicibacter sanguinis PC909]
Length = 526
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 11/130 (8%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R L ++++S ++ + +T NSPS T+HP++ + + +++P +PNTDGLDP+
Sbjct: 221 RPRLFQIIHSHHVNV-QGITLQNSPSWTVHPLFSDDLKFIDLKIINPKDSPNTDGLDPES 279
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
+ G+ +A+KSG + G + R S I +R S V IG EM+
Sbjct: 280 CHRVLILGVHFSVGDDCIAIKSGKIYLGSRLKRASEYITIRNCSMNFGH-GAVVIGSEMA 338
Query: 126 GRIFNVTVNH 135
G + ++ V
Sbjct: 339 GGVKHILVEQ 348
>gi|304317802|ref|YP_003852947.1| glycoside hydrolase family protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779304|gb|ADL69863.1| glycoside hydrolase family 28 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 519
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 68/145 (46%), Gaps = 14/145 (9%)
Query: 3 WDLWW-NSTLKHT--RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
+D WW ++ +K R + L N+LI +T NSPS TIHP+ +N + +
Sbjct: 207 FDTWWHDAKVKRIAWRPRTIFLNKCKNVLI-EGITIKNSPSWTIHPLLSQNLKFINLNIE 265
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P APNTDGLDP+ G+ +A+KSG + S N+ +R
Sbjct: 266 NPKDAPNTDGLDPESCKDVVILGTRFSVGDDCIAIKSGKLATSRKLPVSSENLYIRNCL- 324
Query: 111 TTPTCSGVGIGREMSGRIFNVTVNH 135
V IG EMSG + NV V+
Sbjct: 325 MEYGHGAVVIGSEMSGGVKNVHVDR 349
>gi|224536305|ref|ZP_03676844.1| hypothetical protein BACCELL_01177, partial [Bacteroides
cellulosilyticus DSM 14838]
gi|224522067|gb|EEF91172.1| hypothetical protein BACCELL_01177 [Bacteroides cellulosilyticus
DSM 14838]
Length = 434
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 11/138 (7%)
Query: 7 WNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPN 66
W S R +V L+ N+ + + F NSP+ +HP+ C N ++ + V +P A N
Sbjct: 219 WQSVRHFLRPVMVSLIECKNVWL-QGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQN 277
Query: 67 TDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSG 117
DGLD + + G+ + +KSG D DG R N+ V + G
Sbjct: 278 GDGLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRGRVCENVVVDGCT-VFKGHGG 336
Query: 118 VGIGREMSGRIFNVTVNH 135
+G EMSG + NV+V++
Sbjct: 337 FVVGSEMSGGVRNVSVSN 354
>gi|433656005|ref|YP_007299713.1| endopolygalacturonase [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433294194|gb|AGB20016.1| endopolygalacturonase [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 519
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 68/145 (46%), Gaps = 14/145 (9%)
Query: 3 WDLWW-NSTLKHT--RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
+D WW ++ +K R + L N+LI +T NSPS TIHP+ +N + +
Sbjct: 207 FDTWWHDAKVKRIAWRPRTIFLNKCKNVLI-EGITIKNSPSWTIHPLLSQNLKFINLNIE 265
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P APNTDGLDP+ G+ +A+KSG + S N+ +R
Sbjct: 266 NPKDAPNTDGLDPESCKDVVILGTRFSVGDDCIAIKSGKLATSRKLPVSSENLYIRNCL- 324
Query: 111 TTPTCSGVGIGREMSGRIFNVTVNH 135
V IG EMSG + NV V+
Sbjct: 325 MEYGHGAVVIGSEMSGGVKNVHVDR 349
>gi|423223780|ref|ZP_17210249.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638155|gb|EIY32008.1| hypothetical protein HMPREF1062_02435 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 507
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
++ + W S R +V L+ N+ + + F NSP+ +HP+ C N ++ + V +
Sbjct: 213 LKTEEEWQSVRHFLRPVMVSLIECKNVWL-QGVIFQNSPAWNLHPLMCENVLIEEVQVRN 271
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P A N DGLD + + G+ + +KSG D DG R N+ V +
Sbjct: 272 PSYAQNGDGLDLESCKNALIVNSTFDVGDDGICLKSGKDEDGRRRGRVCENVVVDGCT-V 330
Query: 112 TPTCSGVGIGREMSGRIFNVTVNH 135
G +G EMSG + NV+V++
Sbjct: 331 FKGHGGFVVGSEMSGGVRNVSVSN 354
>gi|315500573|ref|YP_004089375.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315418585|gb|ADU15224.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 476
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 17/150 (11%)
Query: 5 LWWNSTLKHTRGHLVELMNSSNILI-----ISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
L W + R L+++ NSS I + L S T+ VY + V G+TV
Sbjct: 171 LRWAADYDAQRPRLIQIYNSSRIELGNGPMAEPLQLARSGFWTVQIVYSHDVKVSGITVR 230
Query: 60 SPLSA--PNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRV 108
+ + P+TDG+D D I++ + + +K+G D DG+ + RP+ N+ +R
Sbjct: 231 NNIDGKGPSTDGVDIDSSHTILVEHADIDANDDALCLKAGRDADGLRVNRPTENVVIRN- 289
Query: 109 SGTTPTCSGVGIGREMSGRIFNVTVNHLDV 138
S +GV G E SG I NV V+ L V
Sbjct: 290 STIRAAYAGVTFGSETSGGIRNVRVHDLRV 319
>gi|189459631|ref|ZP_03008416.1| hypothetical protein BACCOP_00257 [Bacteroides coprocola DSM 17136]
gi|189433713|gb|EDV02698.1| polygalacturonase (pectinase) [Bacteroides coprocola DSM 17136]
Length = 535
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 11/141 (7%)
Query: 4 DLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
D WNS R L+ + +L+ +TF NSPS +HP+ C + + ++V +P
Sbjct: 227 DEEWNSIRDWLRPVLLSFIKCKKVLL-EGVTFKNSPSWCLHPLSCEDITINNISVSNPWY 285
Query: 64 APNTDGLD---------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+ N D LD + ++G+ + +KSG D DG P N+ +R +
Sbjct: 286 SQNGDALDLESCNRALIQNSSFDAGDDGICIKSGKDEDGRRRGEPCQNVIIRN-NVVLHG 344
Query: 115 CSGVGIGREMSGRIFNVTVNH 135
G +G EMSG + N+ V++
Sbjct: 345 HGGFVVGSEMSGGVKNIYVDN 365
>gi|336429336|ref|ZP_08609303.1| hypothetical protein HMPREF0994_05309 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336002947|gb|EGN33044.1| hypothetical protein HMPREF0994_05309 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 521
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 12/139 (8%)
Query: 6 WWNSTLKHTRGHLVELMNSSNI--LIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
WW+ + + H ++ ++ + + L F PS IHP +C + + + +++P
Sbjct: 209 WWSEENRQSSPHRPRMLFLTHCKHIRVQGLRFSMCPSWCIHPCFCSDLGIYDVEIINPED 268
Query: 64 APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+PNTDG++P+ C+ G+ +A+KSG P S+I +R+
Sbjct: 269 SPNTDGINPESCEHVEIAGCHFSLGDDCIAIKSGKGRRAQENPVPGSHIQIRQCFMENGH 328
Query: 115 CSGVGIGREMSGRIFNVTV 133
GV IG E+S + +VTV
Sbjct: 329 -GGVTIGSEISSGVHHVTV 346
>gi|323451042|gb|EGB06920.1| hypothetical protein AURANDRAFT_65104 [Aureococcus anophagefferens]
Length = 915
Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/139 (30%), Positives = 69/139 (49%), Gaps = 23/139 (16%)
Query: 11 LKHTRGHLVELMNSSNILIISN-----LTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAP 65
L +R L+E + + + N L +SP T+ P Y RN V+ + + +P+ P
Sbjct: 533 LAASRPKLLEFQYVTGLTVAGNAVGDPLHLKDSPFWTLTPSYSRNVRVRDLRITAPIRTP 592
Query: 66 ---NTDGLDPDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC------- 115
NTDG++ + Y+ + + V +KSG D GI +A P+ ++ VR + TC
Sbjct: 593 GIGNTDGVE-NVYVNNSDDGVCMKSGLDGFGINLAIPTEDVLVRNI-----TCGDRRDDA 646
Query: 116 --SGVGIGREMSGRIFNVT 132
G +G EMSG + NVT
Sbjct: 647 GRGGFAVGSEMSGGVRNVT 665
>gi|167764884|ref|ZP_02437005.1| hypothetical protein BACSTE_03276 [Bacteroides stercoris ATCC
43183]
gi|167697553|gb|EDS14132.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 550
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 11/142 (7%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+ D WN R L+ ++ S +L+ +TF NSPS +HP+ C + + + V +
Sbjct: 239 IETDEEWNEIRPWLRPVLLNIVKSKRVLL-EGVTFKNSPSWCLHPLSCEHITINQVKVFN 297
Query: 61 PLSAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P + N D LD + ++G+ + +KSG D DG P N+ V+ +
Sbjct: 298 PWYSQNGDALDLESCKNALIINNIFDAGDDAICIKSGKDEDGRKRGEPCQNVIVKN-NTV 356
Query: 112 TPTCSGVGIGREMSGRIFNVTV 133
G +G EMSG + N+ V
Sbjct: 357 LHGHGGFVVGSEMSGGVKNIYV 378
>gi|337750378|ref|YP_004644540.1| glycoside hydrolase family protein [Paenibacillus mucilaginosus
KNP414]
gi|336301567|gb|AEI44670.1| glycoside hydrolase family 28 [Paenibacillus mucilaginosus KNP414]
Length = 530
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 11/137 (8%)
Query: 7 WNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPN 66
+ + + R +L+ L +L+ TF NSP+ +HP C + ++G+TV +P N
Sbjct: 198 YEAARDYLRPNLLSLRRCKYVLL-EGATFQNSPAWNLHPWACEHVTLRGVTVRNPWYGQN 256
Query: 67 TDGLD---------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSG 117
DGLD DC + G+ + +KSG D G + P +I +R G
Sbjct: 257 GDGLDLDSCRYGLVEDCSFDVGDDAICIKSGKDEAGRELGIPCEDILIRNCR-VYHGHGG 315
Query: 118 VGIGREMSGRIFNVTVN 134
IG EMSG + + V
Sbjct: 316 FVIGSEMSGGVRRLRVE 332
>gi|397691340|ref|YP_006528594.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
gi|395812832|gb|AFN75581.1| exo-poly-alpha-D-galacturonosidase [Melioribacter roseus P3M]
Length = 495
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 11/132 (8%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R +V L+ NIL+ +TF NSP+ IHP+ N +K +TV +P + N DG+D
Sbjct: 165 YLRPVMVNLVKCKNILL-EGVTFQNSPAWNIHPLMSENIILKNVTVRNPWYSQNGDGIDV 223
Query: 73 ---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
DC + G+ + +KSG + G P+ N+ + G IG E
Sbjct: 224 ESCKNVVIYDCKFDVGDDAICMKSGKNEFGRKRGIPTENVIIADCI-VYHGHGGFTIGSE 282
Query: 124 MSGRIFNVTVNH 135
MSG + N+ V +
Sbjct: 283 MSGGVRNIKVTN 294
>gi|371776320|ref|ZP_09482642.1| glycoside hydrolase family protein [Anaerophaga sp. HS1]
Length = 463
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 13/135 (9%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
H R ++ N+ + +T NSP IHP C N ++ + V + N DG+DP
Sbjct: 212 HLRPQFIQFNRCKNVRM-EGVTIINSPFWVIHPYMCHNVVIRNVKVYA--HGHNNDGVDP 268
Query: 73 ---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
DC + G+ +A+KSG + D + PS NI VR + IG E
Sbjct: 269 EMCENVLIEDCVFDQGDDAIAIKSGRNQDAWRLNTPSRNIVVRNCL-VKNGHQLLAIGSE 327
Query: 124 MSGRIFNVTVNHLDV 138
+SG + NV + + V
Sbjct: 328 LSGGVENVFLENCTV 342
>gi|408376656|ref|ZP_11174260.1| Polygalacturonase [Agrobacterium albertimagni AOL15]
gi|407749346|gb|EKF60858.1| Polygalacturonase [Agrobacterium albertimagni AOL15]
Length = 503
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 20/156 (12%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W W T R ++ L I+ +T NSPS T+HPV C + G+T+ +
Sbjct: 207 WWTWPKETRDGARRPRTMFLSGCRHLTIAGITVRNSPSWTVHPVLCEDVLAVGLTIRNHP 266
Query: 63 SAPNTDGLDPDCY---------IESGNGLVAVKSGWDHDGIAMARPSSNIAVR-----RV 108
+PNTDGL+P+ I G+ VA+K+G RP+ N+ +R R
Sbjct: 267 DSPNTDGLNPESSQNIRLVGLDISVGDDCVAIKAGKRDPRGGPDRPTRNVEIRNCLMQRG 326
Query: 109 SGTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG 144
G V +G EMS I +V+++ + +G
Sbjct: 327 HG------AVVMGSEMSQGISDVSISRCHFFGTDRG 356
>gi|427384333|ref|ZP_18880838.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
gi|425727594|gb|EKU90453.1| hypothetical protein HMPREF9447_01871 [Bacteroides oleiciplenus YIT
12058]
Length = 506
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 11/138 (7%)
Query: 7 WNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPN 66
W S R +V L+ N+ + + F NSP+ +HP+ C N ++ + V +P A N
Sbjct: 219 WQSVRHFLRPVMVSLIECKNVWL-QGVIFQNSPAWNLHPLMCENVLIEEVQVRNPSYAQN 277
Query: 67 TDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSG 117
DGLD + + G+ + +KSG D DG R N+ V + G
Sbjct: 278 GDGLDLESCKNTLIVNSTFDVGDDGICLKSGKDEDGRIRGRVCENVVVDGCT-VFKGHGG 336
Query: 118 VGIGREMSGRIFNVTVNH 135
+G EMSG + NV+V++
Sbjct: 337 FVVGSEMSGGVRNVSVSN 354
>gi|380693930|ref|ZP_09858789.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 528
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 4 DLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
D WN R L+ + S +L+ +TF NSPS +HP+ C + V + V++P
Sbjct: 217 DEEWNEIRAWLRPVLLSFVKSKKVLL-EGVTFKNSPSWCLHPLSCEDITVNNIQVINPWY 275
Query: 64 APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+ N D LD + ++G+ + +KSG D +G P N+ V+ +
Sbjct: 276 SQNGDALDLESCKNALIINSVFDAGDDAICIKSGKDENGRRRGEPCQNVIVKN-NTVLHG 334
Query: 115 CSGVGIGREMSGRIFNVTV 133
G +G EMSG + N+ V
Sbjct: 335 HGGFVVGSEMSGGVKNIYV 353
>gi|289578915|ref|YP_003477542.1| glycoside hydrolase family protein [Thermoanaerobacter italicus
Ab9]
gi|289528628|gb|ADD02980.1| glycoside hydrolase family 28 [Thermoanaerobacter italicus Ab9]
Length = 519
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 66/143 (46%), Gaps = 14/143 (9%)
Query: 3 WDLWWNS-TLKHT--RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
++ WW +K R V L NILI LT NSP+ TIHP N +T+
Sbjct: 209 FETWWKEHKIKKGAWRPRTVFLNQCKNILI-EGLTIKNSPAWTIHPFQSENLKFINLTIE 267
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P ++PNTDGL+P+ C G+ +A+KSG + + + + VR
Sbjct: 268 NPQNSPNTDGLNPEASKNVLILGCKFSVGDDCIAIKSGKFDMAQKLGKLTEKVFVRNCY- 326
Query: 111 TTPTCSGVGIGREMSGRIFNVTV 133
GV IG EMSG + V V
Sbjct: 327 MEYGHGGVVIGSEMSGGVKEVYV 349
>gi|326790331|ref|YP_004308152.1| polygalacturonase [Clostridium lentocellum DSM 5427]
gi|326541095|gb|ADZ82954.1| Polygalacturonase [Clostridium lentocellum DSM 5427]
Length = 515
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 28 LIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYIES 78
+++ +T NSPS T+HPV +T+ +P +PNTDG+DP+
Sbjct: 230 VVVEGITIKNSPSWTVHPVRSTKLRFINLTLNNPKDSPNTDGIDPESCNGVEIIGVKFSL 289
Query: 79 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
G+ +A+KSG + M RPS NI +R GV +G EMSG I +V V
Sbjct: 290 GDDCIAIKSGKISVPVDMRRPSENIIIRNCL-MEYGHGGVVLGSEMSGGIKHVYVER 345
>gi|146301983|ref|YP_001196574.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146156401|gb|ABQ07255.1| Candidate polygalacturonase; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 448
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 69/131 (52%), Gaps = 15/131 (11%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP-- 72
R +++ +N NIL+ N+ NSP +H + +N V+G++ S N DG+DP
Sbjct: 193 RPQMIQFLNCKNILV-ENVRIENSPFWCLHLLKSQNITVRGISYKSL--NYNNDGIDPEY 249
Query: 73 --DCYIES-----GNGLVAVKSGWDHDGIA-MARPSSNIAVRRVSGTTPTCSGVGIGREM 124
D IE+ G+ VA+K+G DH+G A A PS NI +R + GV IG EM
Sbjct: 250 AKDVLIENVTFDNGDDNVAIKAGRDHEGRANTASPSENIVIRNCN--FKGLHGVVIGSEM 307
Query: 125 SGRIFNVTVNH 135
S + NV V +
Sbjct: 308 SAGVQNVFVEN 318
>gi|260642009|ref|ZP_05414289.2| exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii DSM
17565]
gi|260623835|gb|EEX46706.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 546
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 4 DLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
D WN R L+ ++ S IL+ +TF NSPS +HP+ C + V + V++P
Sbjct: 227 DEEWNEIRPWLRPVLLSIVKSKKILL-EGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWY 285
Query: 64 APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+ N D +D + ++G+ + +KS D DG P N+ V+ +
Sbjct: 286 SQNGDAIDLESCKNALIINSVFDAGDDAICIKSDKDEDGRRRGEPCQNVIVKN-NTVLHG 344
Query: 115 CSGVGIGREMSGRIFNVTV 133
G +G EMSG + N+ V
Sbjct: 345 HGGFVVGSEMSGGVKNIYV 363
>gi|302875124|ref|YP_003843757.1| glycoside hydrolase family protein [Clostridium cellulovorans 743B]
gi|307690250|ref|ZP_07632696.1| glycoside hydrolase family 28 [Clostridium cellulovorans 743B]
gi|302577981|gb|ADL51993.1| glycoside hydrolase family 28 [Clostridium cellulovorans 743B]
Length = 510
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+R + + + R ++ S NILI ++ NSP I+PV C N V + V +
Sbjct: 227 VRTERIFGDDVSTIRPPFIQPYKSKNILI-KDVKIINSPFWEINPVLCENIKVDNIKVGT 285
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
L N DG+DP+ CY +G+ +A+KSG +++G + P+ N+ + R +
Sbjct: 286 NLY--NNDGVDPESCKDMIIENCYFLTGDDCIAIKSGRNNEGRNIGVPTENVII-RYNEF 342
Query: 112 TPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLR 151
G+ IG E+SG + N H + + ++ Y R +
Sbjct: 343 KDGHGGITIGSEISGGV-NDIFAHDNYFDSKELDYPIRFK 381
>gi|393781473|ref|ZP_10369668.1| hypothetical protein HMPREF1071_00536 [Bacteroides salyersiae
CL02T12C01]
gi|392676536|gb|EIY69968.1| hypothetical protein HMPREF1071_00536 [Bacteroides salyersiae
CL02T12C01]
Length = 537
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 4 DLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
D WN R L+ ++ S +L+ +TF NSPS +HP+ C + V + V +P
Sbjct: 225 DEEWNEIRPWLRPVLLNIVKSKKVLL-EGVTFKNSPSWCLHPLSCEHITVNNVKVFNPWY 283
Query: 64 APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+ N D LD + ++G+ + +KSG D DG P N+ V+ +
Sbjct: 284 SQNGDALDLESCKNALIINSLFDAGDDAICIKSGKDADGRRRGEPCQNVLVKN-NIVLHG 342
Query: 115 CSGVGIGREMSGRIFNVTV 133
G +G EMSG + N+ V
Sbjct: 343 HGGFVVGSEMSGGVKNIYV 361
>gi|374376182|ref|ZP_09633840.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
gi|373233022|gb|EHP52817.1| Exo-poly-alpha-galacturonosidase [Niabella soli DSM 19437]
Length = 547
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 6 WWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAP 65
++ S R +LV ++ S + +++ +TF NSP+ +HP+ +N V+ + V +P A
Sbjct: 207 FYQSVKDFFRPNLV-VLTSCDKVLLEGVTFQNSPAWCLHPLMSKNITVRNVFVKNPWYAQ 265
Query: 66 NTDGLD---------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCS 116
N DG+D + + G+ + +KSG D DG A P+ ++ +R +
Sbjct: 266 NGDGIDLESCSNVLIENSKFDVGDDGLCMKSGRDADGRKRAMPTKDVIIRGCT-VYAAHG 324
Query: 117 GVGIGREMSGRIFNVTVNH 135
G +G EMSG + NV V++
Sbjct: 325 GFVVGSEMSGGVNNVYVSN 343
>gi|299141314|ref|ZP_07034451.1| exo-poly-alpha-D-galacturonosidase [Prevotella oris C735]
gi|298577274|gb|EFI49143.1| exo-poly-alpha-D-galacturonosidase [Prevotella oris C735]
Length = 858
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 26 NILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC---------YI 76
N + +S +T +SP IHP+ C+N V G+ + + PN DG DP+ +
Sbjct: 222 NRVRVSGVTLLHSPFWVIHPLLCKNVTVDGVKIWN--EGPNGDGCDPEACENVLIQNTHF 279
Query: 77 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 131
+G+ +A+KSG ++DG +PS NI +R G+ IG E+SG NV
Sbjct: 280 HTGDDCIAIKSGRNNDGRMWNKPSRNIIIRNCV-MEDGHGGIVIGSEISGGCKNV 333
>gi|281423599|ref|ZP_06254512.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella oris F0302]
gi|281402419|gb|EFB33250.1| putative exo-poly-alpha-D-galacturonosidase [Prevotella oris F0302]
Length = 856
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 26 NILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC---------YI 76
N + +S +T +SP IHP+ C+N V G+ + + PN DG DP+ +
Sbjct: 220 NRVRVSGVTLLHSPFWVIHPLLCKNVTVDGVKIWN--EGPNGDGCDPEACENVLIQNTHF 277
Query: 77 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 131
+G+ +A+KSG ++DG +PS NI +R G+ IG E+SG NV
Sbjct: 278 HTGDDCIAIKSGRNNDGRMWNKPSRNIIIRNCV-MEDGHGGIVIGSEISGGCKNV 331
>gi|317475267|ref|ZP_07934533.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
gi|316908521|gb|EFV30209.1| exo-poly-alpha-D-galacturonosidase [Bacteroides eggerthii
1_2_48FAA]
Length = 533
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 11/136 (8%)
Query: 7 WNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPN 66
WN R L+ ++ S +L+ +TF NSPS +HP+ C + + + V +P + N
Sbjct: 227 WNEIRPWLRPVLLNIVKSKKVLL-EGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQN 285
Query: 67 TDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSG 117
D LD + ++G+ + +KSG D DG P N+ V+ + G
Sbjct: 286 GDALDLESCKNALIINNIFDAGDDAICIKSGKDKDGRERGEPCQNVIVKN-NTVLHGHGG 344
Query: 118 VGIGREMSGRIFNVTV 133
+G EMSG + N+ V
Sbjct: 345 FVVGSEMSGGVKNIYV 360
>gi|399032800|ref|ZP_10732032.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398068822|gb|EJL60216.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 456
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 13/135 (9%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
H R ++ NIL+ +T NSP TIHP ++ ++ + V + N DG+DP
Sbjct: 205 HFRPQFIQFNRCENILM-DGVTITNSPFWTIHPFLSKDVVLRNLKVYA--HGHNNDGVDP 261
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+ C + G+ +A+KSG + D + S NI +R + V IG E
Sbjct: 262 EMSQNVLIENCIFDQGDDAIAIKSGSNQDAWRLNTSSKNIVMRNCT-VKNGHQLVAIGSE 320
Query: 124 MSGRIFNVTVNHLDV 138
+SG I NV +++ V
Sbjct: 321 LSGGIENVFIDNCTV 335
>gi|224537921|ref|ZP_03678460.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520465|gb|EEF89570.1| hypothetical protein BACCELL_02810 [Bacteroides cellulosilyticus
DSM 14838]
Length = 964
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 12/117 (10%)
Query: 26 NILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYI 76
N +++ +T SP +HP+ +N V+G+ S PN DG DP+ C
Sbjct: 721 NRVLVEGVTIIRSPFWMLHPLLSKNVIVRGVKFDS--HGPNNDGCDPESCENVLIESCDF 778
Query: 77 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV 133
+G+ VA+KSG ++DG PS NI VR +GV +G E+SG ++V V
Sbjct: 779 NNGDDCVAIKSGKNNDGRTWNLPSRNIIVRNCI-MRDGHAGVAVGSEISGSCYDVWV 834
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 78/190 (41%), Gaps = 22/190 (11%)
Query: 7 WNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPN 66
W + R L+ L + +L+ +TF NSP +HP C++ V G+ V +P ++ N
Sbjct: 206 WVRLKDYVRPELMHLYHCERVLL-QGVTFQNSPFWNLHPELCKHLIVDGVCVRNPWNSQN 264
Query: 67 TDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSG 117
DGLD + + G+ V +KSG + G P+ N+ V + G
Sbjct: 265 GDGLDIESCQNVLVVQSTFDVGDDAVCIKSGRNEAGRLRGMPAKNVVVEDCT-VFHGHGG 323
Query: 118 VGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISFVNVV 177
+G EMSG + ++ V + G LR + + G +S I NV
Sbjct: 324 FVVGSEMSGGVHSILVRNCKFLNTDTG-----LRFKSNRQRG------GHVSDIYIQNVY 372
Query: 178 SVNTTKAPVL 187
P+L
Sbjct: 373 MCGIAAEPIL 382
>gi|218129299|ref|ZP_03458103.1| hypothetical protein BACEGG_00876 [Bacteroides eggerthii DSM 20697]
gi|217988476|gb|EEC54797.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 533
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 11/136 (8%)
Query: 7 WNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPN 66
WN R L+ ++ S +L+ +TF NSPS +HP+ C + + + V +P + N
Sbjct: 227 WNEIRPWLRPVLLNIVKSKKVLL-EGVTFKNSPSWCLHPLSCEHITINQVKVFNPWYSQN 285
Query: 67 TDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSG 117
D LD + ++G+ + +KSG D DG P N+ V+ + G
Sbjct: 286 GDALDLESCKNALIINNIFDAGDDAICIKSGKDKDGRERGEPCQNVIVKN-NTVLHGHGG 344
Query: 118 VGIGREMSGRIFNVTV 133
+G EMSG + N+ V
Sbjct: 345 FVVGSEMSGGVKNIYV 360
>gi|329956871|ref|ZP_08297439.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523628|gb|EGF50720.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 522
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 4 DLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
D W + R L+ ++ S +L+ +TF NSPS +HP+ C + + G+ V +P
Sbjct: 224 DSEWEGMKRWLRPVLLSIVKSKRVLL-EGVTFRNSPSWCLHPLSCEDLTLNGVKVFNPWY 282
Query: 64 APNTDGLD---------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+ N D LD + ++G+ + +KSG + DG P N+ V+ +
Sbjct: 283 SQNGDALDVESCKNVVVTNSLFDAGDDAICIKSGKNADGRRRGEPCENVLVKN-NTVLHG 341
Query: 115 CSGVGIGREMSGRIFNVTV 133
G +G EMSG + NV V
Sbjct: 342 HGGFVVGSEMSGGVRNVYV 360
>gi|334342614|ref|YP_004555218.1| glycoside hydrolase [Sphingobium chlorophenolicum L-1]
gi|334103289|gb|AEG50712.1| glycoside hydrolase family 28 [Sphingobium chlorophenolicum L-1]
Length = 482
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R V+ +LI + SP +HPV CRN V+G+ + PN DG DP
Sbjct: 228 YLRPAFVQFYACDRVLI-EGVKLRRSPFWQVHPVLCRNVVVRGVDIHG--LGPNNDGCDP 284
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+ C ++G+ +AV SG + DG +A P+ NI +R GV +G +
Sbjct: 285 ESVDMMLIEQCTFDTGDDCIAVNSGRNADGRRLAAPAQNIVIRDCR-MKEGHGGVVVGSQ 343
Query: 124 MSGRIFNV-----TVNHLDVW 139
+SG ++ T++ D+W
Sbjct: 344 ISGGARHIYAERCTMDSPDLW 364
>gi|423295815|ref|ZP_17273942.1| hypothetical protein HMPREF1070_02607 [Bacteroides ovatus
CL03T12C18]
gi|392671543|gb|EIY65015.1| hypothetical protein HMPREF1070_02607 [Bacteroides ovatus
CL03T12C18]
Length = 454
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 62/135 (45%), Gaps = 13/135 (9%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD- 71
H R HL+ N+L+ S SP TIH C G V+ + V + N DG+D
Sbjct: 198 HLRPHLIHFNRCENVLLDS-FKIRESPFWTIHMYMCNGGIVRNLDVKA--HGHNNDGIDL 254
Query: 72 --------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
DC + G+ V +K+G + D + P+ NI +R + + +GIG E
Sbjct: 255 EMTRNFLVEDCTFDQGDDAVVIKAGRNRDAWRLNTPTENIVIRNCN-ILEGHTLLGIGSE 313
Query: 124 MSGRIFNVTVNHLDV 138
+SG I NV ++ V
Sbjct: 314 ISGGIRNVYMHDCKV 328
>gi|407688164|ref|YP_006803337.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291544|gb|AFT95856.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 488
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 96/228 (42%), Gaps = 39/228 (17%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R ++ N+LI +T SP ++PV C+N V + S PN+DG DP
Sbjct: 233 YLRPPFIQPYRCENVLI-EGVTILRSPFWLVNPVLCKNVTVNDVYCKS--FGPNSDGCDP 289
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+ C ++G+ +A+KSG + DG + P SNI + GV IG E
Sbjct: 290 ESCTNVLISNCTFDTGDDCIAIKSGRNADGRRVNVPCSNIVIEHCE-MKAGHGGVVIGSE 348
Query: 124 MSGRIFNVTVNH-------LDVWMQQQ-------------------GSYKDRLRLYGHPK 157
+SG + N+ H LD ++ + G+ KD + + +
Sbjct: 349 ISGGVENLYAQHCTMSSPDLDRGIRIKTNSIRGGHLKNLNYRNIDIGTVKDAVVVNFFYE 408
Query: 158 EGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
EG K P + I+ N+ + +A VL G T + + N+++
Sbjct: 409 EGDAGKFPPLLEDITIENLNVASANRAFVLRGYDHTPISGLTLNNITI 456
>gi|332533447|ref|ZP_08409312.1| glycoside hydrolase, family 77 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332037156|gb|EGI73613.1| glycoside hydrolase, family 77 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 474
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 65/134 (48%), Gaps = 13/134 (9%)
Query: 9 STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTD 68
ST + R ++ NILI +T NSP ++PV C++ V + S PN+D
Sbjct: 211 STGAYLRPPFIQPYKCKNILI-QGVTIKNSPFWLMNPVLCKSVTVDKVNFSS--HGPNSD 267
Query: 69 GLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVG 119
G DP+ C ++G+ +A+KSG + DG + PS NI + GV
Sbjct: 268 GCDPESCDHVHIKNCVFDTGDDCIAIKSGRNADGRRVGVPSQNIVIENCH-MKEGHGGVV 326
Query: 120 IGREMSGRIFNVTV 133
IG E+SG + NV V
Sbjct: 327 IGSEISGGVNNVFV 340
>gi|366053529|ref|ZP_09451251.1| polygalacturonase [Lactobacillus suebicus KCTC 3549]
Length = 439
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYIESGN 80
+S+ T NSP T+H VY + MT +P A NTD +D D C ++ G+
Sbjct: 172 LSDFTLENSPFWTLHMVYSNKISIDNMTFSNPAEAINTDAMDIDSSEDVTVKNCLLDVGD 231
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
V +KSG DGI + +P+ N+ V + G+ IG E + I +V V++
Sbjct: 232 DGVTLKSGSGEDGIRVNKPTKNVKVSDCR-ILASHGGIAIGSETAAGISDVEVSN 285
>gi|383112459|ref|ZP_09933252.1| hypothetical protein BSGG_0668 [Bacteroides sp. D2]
gi|313693133|gb|EFS29968.1| hypothetical protein BSGG_0668 [Bacteroides sp. D2]
Length = 454
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD- 71
H R HL+ N+L+ S SP TIH C G V+ + V + N DG+D
Sbjct: 198 HLRPHLIHFNRCENVLLDS-FKIRESPFWTIHMYMCNGGIVRNLDVKA--HGHNNDGIDL 254
Query: 72 --------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
DC + G+ V +K+G + D + P+ NI +R + + +GIG E
Sbjct: 255 EMTRNFLVEDCTFDQGDDAVVIKAGRNRDAWRLNTPTENIVIRNCN-ILEGHTLLGIGSE 313
Query: 124 MSGRIFNVTVN 134
+SG I NV ++
Sbjct: 314 ISGGIRNVYMH 324
>gi|336417632|ref|ZP_08597953.1| hypothetical protein HMPREF1017_05061 [Bacteroides ovatus
3_8_47FAA]
gi|335935373|gb|EGM97327.1| hypothetical protein HMPREF1017_05061 [Bacteroides ovatus
3_8_47FAA]
Length = 454
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD- 71
H R HL+ N+L+ S SP TIH C G V+ + V + N DG+D
Sbjct: 198 HLRPHLIHFNRCENVLLDS-FKIRESPFWTIHMYMCNGGIVRNLDVKA--HGHNNDGIDL 254
Query: 72 --------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
DC + G+ V +K+G + D + P+ NI +R + + +GIG E
Sbjct: 255 EMTRNFLVEDCTFDQGDDAVVIKAGRNRDAWRLNTPTENIVIRNCN-ILEGHTLLGIGSE 313
Query: 124 MSGRIFNVTVN 134
+SG I NV ++
Sbjct: 314 ISGGIRNVYMH 324
>gi|255691972|ref|ZP_05415647.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii
DSM 17565]
gi|260622381|gb|EEX45252.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 453
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD- 71
H R HL+ N+L+ S SP TIH C G V+ + V + N DG+D
Sbjct: 198 HLRPHLIHFNRCENVLLDS-FKIRESPFWTIHMYMCNGGIVRNLDVKA--HGHNNDGIDL 254
Query: 72 --------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
DC + G+ V +K+G + D + P+ NI +R + + +GIG E
Sbjct: 255 EMTRNFLVEDCTFDQGDDAVVIKAGRNRDAWRLNTPTENIVIRNCN-ILEGHTLLGIGSE 313
Query: 124 MSGRIFNVTVN 134
+SG I NV ++
Sbjct: 314 ISGGIRNVYMH 324
>gi|393786780|ref|ZP_10374912.1| hypothetical protein HMPREF1068_01192 [Bacteroides nordii
CL02T12C05]
gi|392658015|gb|EIY51645.1| hypothetical protein HMPREF1068_01192 [Bacteroides nordii
CL02T12C05]
Length = 536
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 4 DLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
D W+ R L+ ++ S +L+ +TF NSPS +HP+ C + + + V +P
Sbjct: 225 DEEWDEIRPWLRPVLLNIVKSKKVLL-EGVTFKNSPSWCLHPLSCEHITINNVKVFNPWY 283
Query: 64 APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+ N D LD + ++G+ + +KSG D DG P N+ V+ +
Sbjct: 284 SQNGDALDLESCKNALIINSLFDAGDDAICIKSGKDEDGRRRGEPCQNVLVKN-NTVLHG 342
Query: 115 CSGVGIGREMSGRIFNVTV 133
G +G EMSG + N+ V
Sbjct: 343 HGGFVVGSEMSGGVKNIYV 361
>gi|412993465|emb|CCO13976.1| predicted protein [Bathycoccus prasinos]
Length = 635
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 4 DLWWN-------STLKHTRGH---LVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFV 53
D WW+ S + H LV L+ S++ I N+ NSP T+ P YC V
Sbjct: 314 DFWWDRKTDQKYSPSMRKKAHVPNLVHLVGCSDVKI-ENIVLTNSPHFTVRPQYCNKVSV 372
Query: 54 KGMTVLSPLSAPNTDG--LDP-------DCYIESGN--GLVAVKSGWDHDGIAMARPSSN 102
+ + +P ++P T+G D D +I +G+ VA+KSG D+ G PS N
Sbjct: 373 SRIHISNPANSPGTNGVVFDSTSNSFLRDSFITTGDKEDAVAIKSGKDYHGRKANVPSKN 432
Query: 103 IAVRRVSGTTPTCSGVGIGREMSGRIFNV 131
I V V T + +G EMSG + N+
Sbjct: 433 IRVEHV--TILGGHALSVGSEMSGGVSNI 459
>gi|160887026|ref|ZP_02068029.1| hypothetical protein BACOVA_05040 [Bacteroides ovatus ATCC 8483]
gi|423288884|ref|ZP_17267735.1| hypothetical protein HMPREF1069_02778 [Bacteroides ovatus
CL02T12C04]
gi|156107437|gb|EDO09182.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|295086775|emb|CBK68298.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
gi|392668974|gb|EIY62466.1| hypothetical protein HMPREF1069_02778 [Bacteroides ovatus
CL02T12C04]
Length = 539
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 4 DLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
D W R L+ ++ S +L+ +TF NSPS +HP+ C + V + V++P
Sbjct: 228 DEEWAEIRPWLRPVLLSIVKSKKVLL-EGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWY 286
Query: 64 APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+ N D +D + ++G+ + +KSG D DG P N+ V+ +
Sbjct: 287 SQNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHG 345
Query: 115 CSGVGIGREMSGRIFNVTV 133
G +G EMSG + N+ V
Sbjct: 346 HGGFVVGSEMSGGVKNIYV 364
>gi|423216971|ref|ZP_17203467.1| hypothetical protein HMPREF1061_00240 [Bacteroides caccae
CL03T12C61]
gi|392629501|gb|EIY23508.1| hypothetical protein HMPREF1061_00240 [Bacteroides caccae
CL03T12C61]
Length = 539
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 4 DLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
D W R L+ ++ S +L+ +TF NSPS +HP+ C + V + V++P
Sbjct: 228 DEEWAEIRPWLRPVLLSIVKSKKVLL-EGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWY 286
Query: 64 APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+ N D +D + ++G+ + +KSG D DG P N+ V+ +
Sbjct: 287 SQNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHG 345
Query: 115 CSGVGIGREMSGRIFNVTV 133
G +G EMSG + N+ V
Sbjct: 346 HGGFVVGSEMSGGVKNIYV 364
>gi|284039631|ref|YP_003389561.1| glycoside hydrolase family protein [Spirosoma linguale DSM 74]
gi|283818924|gb|ADB40762.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 551
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R +LV L N +L+ +TF NSP+ +HP+ C++ ++ +T +P A N DG+D +
Sbjct: 224 RPNLVVLTNCKKVLL-EGVTFQNSPAWCLHPLMCQDLTLRNVTTKNPEYAHNGDGMDIES 282
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C ++ G+ + +KSG D +G P+ N +R + G +G EMS
Sbjct: 283 CKNFLIEGCTLDVGDDAICIKSGKDEEGRKRGMPTENGIIRN-NTVYNGHGGFVVGSEMS 341
Query: 126 G 126
G
Sbjct: 342 G 342
>gi|261406869|ref|YP_003243110.1| glycoside hydrolase family protein [Paenibacillus sp. Y412MC10]
gi|261283332|gb|ACX65303.1| glycoside hydrolase family 28 [Paenibacillus sp. Y412MC10]
Length = 475
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 11/130 (8%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD- 71
H R LV+L +L TF NSP+ +HP C + ++ +++ + + N DGLD
Sbjct: 203 HLRPTLVQLDRCRKVLF-DGPTFRNSPAWNVHPWLCEHVTIRNVSIRNQWHSQNGDGLDL 261
Query: 72 --------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
D + G+ + +KSG D DG A+A P+ + +R G IG E
Sbjct: 262 DSCRYANIYDSVFDVGDDAICIKSGKDADGRALAVPTEYVTIRNCQ-VFHGHGGFVIGSE 320
Query: 124 MSGRIFNVTV 133
MSG + N+ +
Sbjct: 321 MSGDVRNIAI 330
>gi|237721299|ref|ZP_04551780.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
gi|229449095|gb|EEO54886.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 2_2_4]
Length = 539
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 4 DLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
D W R L+ ++ S +L+ +TF NSPS +HP+ C + V + V++P
Sbjct: 228 DEEWAEIRPWLRPVLLSIVKSKKVLL-EGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWY 286
Query: 64 APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+ N D +D + ++G+ + +KSG D DG P N+ V+ +
Sbjct: 287 SQNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHG 345
Query: 115 CSGVGIGREMSGRIFNVTV 133
G +G EMSG + N+ V
Sbjct: 346 HGGFVVGSEMSGGVKNIYV 364
>gi|261879890|ref|ZP_06006317.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270333401|gb|EFA44187.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 439
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 72/139 (51%), Gaps = 14/139 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R H++ L+ N L IS+LT T+H + C + ++G+++L+ L N DG+D D
Sbjct: 156 RPHVLTLIGVRN-LRISDLTIKEGAYWTVHLIGCEDAVIEGISLLNNLKIRNGDGIDIDH 214
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
CYI SG+ + +K+ ++ P+ +I V + T+ +C+ + IG E
Sbjct: 215 SRHVRISNCYITSGDDCICLKNRREYQEYG---PTHDITVTNCTMTSRSCA-IKIGSENM 270
Query: 126 GRIFNVTVNHLDVWMQQQG 144
I+NVT+++ + +G
Sbjct: 271 DSIYNVTIDNCIITRSNRG 289
>gi|153807509|ref|ZP_01960177.1| hypothetical protein BACCAC_01789 [Bacteroides caccae ATCC 43185]
gi|149129871|gb|EDM21083.1| polygalacturonase (pectinase) [Bacteroides caccae ATCC 43185]
Length = 539
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 4 DLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
D W R L+ ++ S +L+ +TF NSPS +HP+ C + V + V++P
Sbjct: 228 DEEWAEIRPWLRPVLLSIVKSKKVLL-EGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWY 286
Query: 64 APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+ N D +D + ++G+ + +KSG D DG P N+ V+ +
Sbjct: 287 SQNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHG 345
Query: 115 CSGVGIGREMSGRIFNVTV 133
G +G EMSG + N+ V
Sbjct: 346 HGGFVVGSEMSGGVKNIYV 364
>gi|294807547|ref|ZP_06766344.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345512393|ref|ZP_08791923.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D1]
gi|294445248|gb|EFG13918.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345453872|gb|EEO50012.2| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D1]
Length = 529
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 4 DLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
D W R L+ ++ S +L+ +TF NSPS +HP+ C + V + V++P
Sbjct: 218 DEEWAEIRPWLRPVLLSIVKSKKVLL-EGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWY 276
Query: 64 APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+ N D +D + ++G+ + +KSG D DG P N+ V+ +
Sbjct: 277 SQNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHG 335
Query: 115 CSGVGIGREMSGRIFNVTV 133
G +G EMSG + N+ V
Sbjct: 336 HGGFVVGSEMSGGVKNIYV 354
>gi|298482165|ref|ZP_07000353.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
gi|298271722|gb|EFI13295.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. D22]
Length = 539
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 4 DLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
D W R L+ ++ S +L+ +TF NSPS +HP+ C + V + V++P
Sbjct: 228 DEEWAEIRPWLRPVLLSIVKSKKVLL-EGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWY 286
Query: 64 APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+ N D +D + ++G+ + +KSG D DG P N+ V+ +
Sbjct: 287 SQNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHG 345
Query: 115 CSGVGIGREMSGRIFNVTV 133
G +G EMSG + N+ V
Sbjct: 346 HGGFVVGSEMSGGVKNIYV 364
>gi|293369380|ref|ZP_06615965.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|336406828|ref|ZP_08587475.1| hypothetical protein HMPREF0127_04788 [Bacteroides sp. 1_1_30]
gi|292635547|gb|EFF54054.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CMC 3f]
gi|335933190|gb|EGM95200.1| hypothetical protein HMPREF0127_04788 [Bacteroides sp. 1_1_30]
Length = 529
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 4 DLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
D W R L+ ++ S +L+ +TF NSPS +HP+ C + V + V++P
Sbjct: 218 DEEWAEIRPWLRPVLLSIVKSKKVLL-EGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWY 276
Query: 64 APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+ N D +D + ++G+ + +KSG D DG P N+ V+ +
Sbjct: 277 SQNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHG 335
Query: 115 CSGVGIGREMSGRIFNVTV 133
G +G EMSG + N+ V
Sbjct: 336 HGGFVVGSEMSGGVKNIYV 354
>gi|349858579|gb|AEQ20324.1| endopygalactorunase [uncultured bacterium CSLG10]
Length = 452
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 13/145 (8%)
Query: 5 LWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSA 64
L W + R L+++ S N+ + LT S T+H Y R V G+T+ + +
Sbjct: 153 LRWAADYDTPRPRLIQIYKSDNVEL-QGLTLRRSGFWTVHICYSRKVTVDGVTIRNNIGG 211
Query: 65 --PNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
P+TDG+D D IE + + +K+G D DG+ + RP+ N+ + V+
Sbjct: 212 RGPSTDGIDVDSSSDVLVQNADIECNDDAIVMKAGRDADGLRVNRPTENVVIHDVT-VRD 270
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDV 138
+G+ G E SG I +V + V
Sbjct: 271 GAAGITFGSETSGGIRHVEAYRIHV 295
>gi|262408522|ref|ZP_06085068.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294646518|ref|ZP_06724155.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|262353387|gb|EEZ02481.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638137|gb|EFF56518.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
Length = 539
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 4 DLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
D W R L+ ++ S +L+ +TF NSPS +HP+ C + V + V++P
Sbjct: 228 DEEWAEIRPWLRPVLLSIVKSKKVLL-EGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWY 286
Query: 64 APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+ N D +D + ++G+ + +KSG D DG P N+ V+ +
Sbjct: 287 SQNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHG 345
Query: 115 CSGVGIGREMSGRIFNVTV 133
G +G EMSG + N+ V
Sbjct: 346 HGGFVVGSEMSGGVKNIYV 364
>gi|299148526|ref|ZP_07041588.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
gi|298513287|gb|EFI37174.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 3_1_23]
Length = 539
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 4 DLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
D W R L+ ++ S +L+ +TF NSPS +HP+ C + V + V++P
Sbjct: 228 DEEWAEIRPWLRPVLLSIVKSKKVLL-EGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWY 286
Query: 64 APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+ N D +D + ++G+ + +KSG D DG P N+ V+ +
Sbjct: 287 SQNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHG 345
Query: 115 CSGVGIGREMSGRIFNVTV 133
G +G EMSG + N+ V
Sbjct: 346 HGGFVVGSEMSGGVKNIYV 364
>gi|383114440|ref|ZP_09935204.1| hypothetical protein BSGG_5145 [Bacteroides sp. D2]
gi|382948584|gb|EIC71811.1| hypothetical protein BSGG_5145 [Bacteroides sp. D2]
Length = 529
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 4 DLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
D W R L+ ++ S +L+ +TF NSPS +HP+ C + V + V++P
Sbjct: 218 DEEWAEIRPWLRPVLLSIVKSKKVLL-EGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWY 276
Query: 64 APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+ N D +D + ++G+ + +KSG D DG P N+ V+ +
Sbjct: 277 SQNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHG 335
Query: 115 CSGVGIGREMSGRIFNVTV 133
G +G EMSG + N+ V
Sbjct: 336 HGGFVVGSEMSGGVKNIYV 354
>gi|423294962|ref|ZP_17273089.1| hypothetical protein HMPREF1070_01754 [Bacteroides ovatus
CL03T12C18]
gi|392674542|gb|EIY67988.1| hypothetical protein HMPREF1070_01754 [Bacteroides ovatus
CL03T12C18]
Length = 529
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 4 DLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
D W R L+ ++ S +L+ +TF NSPS +HP+ C + V + V++P
Sbjct: 218 DEEWAEIRPWLRPVLLSIVKSKKVLL-EGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWY 276
Query: 64 APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+ N D +D + ++G+ + +KSG D DG P N+ V+ +
Sbjct: 277 SQNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHG 335
Query: 115 CSGVGIGREMSGRIFNVTV 133
G +G EMSG + N+ V
Sbjct: 336 HGGFVVGSEMSGGVKNIYV 354
>gi|386819250|ref|ZP_10106466.1| endopolygalacturonase [Joostella marina DSM 19592]
gi|386424356|gb|EIJ38186.1| endopolygalacturonase [Joostella marina DSM 19592]
Length = 569
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 11/130 (8%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC 74
R +V ++N + +L+ TF NSP+ IHP+ N ++ + V +P + N DGLD +
Sbjct: 237 RPVMVSIVNCNKVLL-DGPTFQNSPAWNIHPLMSENVIIRNLKVRNPWYSQNGDGLDLES 295
Query: 75 ---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
+ G+ + +KSG D DG P+ N+ V+ + G IG EMS
Sbjct: 296 CKNVLIYNNTFDVGDDAICIKSGKDKDGRDRGIPTENVIVKN-NTVYHAHGGFVIGSEMS 354
Query: 126 GRIFNVTVNH 135
G + N+ V++
Sbjct: 355 GGVKNINVSN 364
>gi|336414787|ref|ZP_08595131.1| hypothetical protein HMPREF1017_02239 [Bacteroides ovatus
3_8_47FAA]
gi|335942157|gb|EGN04005.1| hypothetical protein HMPREF1017_02239 [Bacteroides ovatus
3_8_47FAA]
Length = 529
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 4 DLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
D W R L+ ++ S +L+ +TF NSPS +HP+ C + V + V++P
Sbjct: 218 DEEWAEIRPWLRPVLLSIVKSKKVLL-EGVTFKNSPSWCLHPLSCEDFTVNNIMVINPWY 276
Query: 64 APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+ N D +D + ++G+ + +KSG D DG P N+ V+ +
Sbjct: 277 SQNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHG 335
Query: 115 CSGVGIGREMSGRIFNVTV 133
G +G EMSG + N+ V
Sbjct: 336 HGGFVVGSEMSGGVKNIYV 354
>gi|255594301|ref|XP_002536062.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223521016|gb|EEF26321.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 412
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 15/146 (10%)
Query: 2 RWDLWW-NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
R WW + + + R L+ +SS+IL+ N+T NSPS I P Y + + MTV +
Sbjct: 129 RGQSWWPDRSAANKRPRLIVFRHSSHILM-ENITVQNSPSWQIVPYYSTDLVFRNMTVYA 187
Query: 61 PLS-APNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
P + NTDG+DP I++G+ +A+KSG + PS +I +R
Sbjct: 188 PDRVSHNTDGIDPFSSSHVLIEHVTIDTGDDNIAIKSGQP-NSPGGDEPSHDIVIR--DS 244
Query: 111 TTPTCSGVGIGREMSGRIFNVTVNHL 136
T G+ IG E++G ++NV +
Sbjct: 245 TFLHGHGLSIGSEVAGGVYNVLAERI 270
>gi|294674151|ref|YP_003574767.1| pectinase family protein/glycosyl hydrolase family 88 [Prevotella
ruminicola 23]
gi|294473505|gb|ADE82894.1| pectinase family protein/glycosyl hydrolase family 88 [Prevotella
ruminicola 23]
Length = 1596
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 13/126 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP-- 72
R LV IL+ ++T SP IHP++ + V+ + +++ PN DG DP
Sbjct: 219 RPQLVSFNKCEGILL-EDVTLLRSPFWVIHPLHSTDITVRRVKMIN--DGPNGDGCDPEC 275
Query: 73 -------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
DC+ +G+ +A+KSG + DG PS NI +R GV +G E+S
Sbjct: 276 CDRVLIEDCFFNTGDDCIAIKSGRNRDGRERNMPSKNIIIRNCEMKNGH-GGVVVGSEIS 334
Query: 126 GRIFNV 131
G NV
Sbjct: 335 GGCQNV 340
>gi|238917515|ref|YP_002931032.1| glycoside hydrolase family 28 [Eubacterium eligens ATCC 27750]
gi|238872875|gb|ACR72585.1| Glycoside Hydrolase Family 28 [Eubacterium eligens ATCC 27750]
Length = 518
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 13/116 (11%)
Query: 4 DLWW-NSTLKHT--RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
D WW N +++T R L + N SN+ + +T NSPS TIHP + ++ + +L+
Sbjct: 207 DNWWKNCKIRNTAWRPRLFFINNCSNV-TMHGITVQNSPSWTIHPYFSKHLKFIDVKILN 265
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR 107
P ++ NTDGLDP+ YI G+ +A+KSG + P+ ++ VR+
Sbjct: 266 PANSHNTDGLDPESCQDVLVLGTYISVGDDCIAIKSGKIYMAQKEKTPTEDMTVRQ 321
>gi|238916395|ref|YP_002929912.1| glycoside hydrolase family 28-like polygalacturonase [Eubacterium
eligens ATCC 27750]
gi|238871755|gb|ACR71465.1| Glycoside Hydrolase Family 28-like polygalacturonase [Eubacterium
eligens ATCC 27750]
Length = 458
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 11/130 (8%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R +V L + IL+ +TF NSP+ IHP +C+N V+ +TV +P A N DG+D +
Sbjct: 201 RPVMVSLRHCKRILL-DGVTFKNSPAWNIHPFFCKNLTVRNVTVSNPYYAQNGDGIDVES 259
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C E+G+ + +KSG + + P ++ + G IG EMS
Sbjct: 260 CKKVHIHNCTFETGDDAICLKSGKNAVARQIEGPCEDVYIHDCL-VNEGHGGFVIGSEMS 318
Query: 126 GRIFNVTVNH 135
I NV V +
Sbjct: 319 RGIKNVLVEN 328
>gi|423212244|ref|ZP_17198773.1| hypothetical protein HMPREF1074_00305 [Bacteroides xylanisolvens
CL03T12C04]
gi|392695132|gb|EIY88357.1| hypothetical protein HMPREF1074_00305 [Bacteroides xylanisolvens
CL03T12C04]
Length = 539
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 4 DLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
D W R L+ ++ S +L+ +TF NSPS +HP+ C + V + V++P
Sbjct: 228 DEEWAEIRPWLRPVLLSIVKSKKVLL-EGVTFKNSPSWCLHPLSCEDFTVNNVMVINPWY 286
Query: 64 APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+ N D +D + ++G+ + +KSG D DG P N+ V+ +
Sbjct: 287 SQNGDAIDLESCKNALIINSVFDAGDDAICIKSGKDEDGRRRGEPCQNVIVKN-NTVLHG 345
Query: 115 CSGVGIGREMSGRIFNVTV 133
G +G EMSG + N+ V
Sbjct: 346 HGGFVVGSEMSGGVKNIYV 364
>gi|375100955|ref|ZP_09747218.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
gi|374661687|gb|EHR61565.1| endopolygalacturonase [Saccharomonospora cyanea NA-134]
Length = 462
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 68/134 (50%), Gaps = 18/134 (13%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGL-- 70
+ R +++ SS++L+ +T ++P H +Y + V+ +TV + PN DG+
Sbjct: 204 YLRPSMLQFYESSDVLV-EGVTIVDAPMWVNHFIYSDDITVRDVTVKT--HRPNNDGVAI 260
Query: 71 --DPDCYIES------GNGLVAVKSGWDHDGIAMARPSSNIAVR--RVSGTTPTCSGVGI 120
D +E+ G+ V VKSG D DG + RPS NI VR R+SGT G I
Sbjct: 261 DSSSDVLVENNDFQGIGDDCVVVKSGRDEDGRRVGRPSENIVVRGNRMSGTE---GGFAI 317
Query: 121 GREMSGRIFNVTVN 134
G EMSG + V V
Sbjct: 318 GSEMSGGVNTVFVE 331
>gi|336314135|ref|ZP_08569056.1| endopolygalacturonase [Rheinheimera sp. A13L]
gi|335881648|gb|EGM79526.1| endopolygalacturonase [Rheinheimera sp. A13L]
Length = 479
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 102/238 (42%), Gaps = 44/238 (18%)
Query: 28 LIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYIES 78
++I +T NSP I+PV C++ ++G+ +S PN+DG DP+ C ++
Sbjct: 235 VLIEGVTIRNSPFWLINPVLCKDVVIRGVNCVS--FGPNSDGCDPESCQRVLIENCLFDT 292
Query: 79 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSG------------ 126
G+ +A+KSG + +G +A P + ++ + GV IG E+SG
Sbjct: 293 GDDCIALKSGRNAEGRRLATPIQQVVIQDCLMKSGH-GGVVIGSEISGGAKQIFARRCRM 351
Query: 127 ------RIFNVTVNHLDVWMQQQ--------GSYKDRLRLYGHPKEGWDPKAIPKISGIS 172
R + N + + +Q G KD + + + +EG +P++ +
Sbjct: 352 SSPNLERGLRIKTNSVRGGLIEQIAVDDIEIGEVKDAIVINFYYEEGDAGNFLPEVKDLK 411
Query: 173 FVNVVSVNTTKAPVL-----AGIIGTQFEEICMKNVSLLVQAPSVKWQCRFVSGFNGQ 225
N +A + AGI G Q ++ + SL V S ++ VS NG+
Sbjct: 412 ISNFRVKKAQRAFEIRGLPRAGISGIQMSDVSFEQASLGVLEHSSDFKLENVS-LNGK 468
>gi|280977865|gb|ACZ98650.1| polygalacturonase [Cellulosilyticum ruminicola]
Length = 518
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 66/143 (46%), Gaps = 13/143 (9%)
Query: 4 DLWWNSTLKHT--RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
D W N +K R + L+ +IL+ +T NSPS T+HP+ +T+ +P
Sbjct: 208 DWWINCKVKREAWRPRSLYLLECHDILV-EGITIKNSPSWTVHPIRSSKLRFINLTLNNP 266
Query: 62 LSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
+PNTDG+DP+ G+ +A+KSG + RPS NI +R
Sbjct: 267 KDSPNTDGIDPESCNGVEILGVKFSLGDDCIAIKSGKISIPLKERRPSENIIIRNCL-MQ 325
Query: 113 PTCSGVGIGREMSGRIFNVTVNH 135
V +G EMSG + NV V
Sbjct: 326 YGHGAVVLGSEMSGGVKNVFVER 348
>gi|298385027|ref|ZP_06994586.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298262171|gb|EFI05036.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 528
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 64/139 (46%), Gaps = 11/139 (7%)
Query: 4 DLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
D W R ++ ++ S IL+ +TF NSP IHP+ C + + + V +P
Sbjct: 227 DEEWTYMKSWLRPVMLSIVKSKRILL-EGVTFKNSPGWCIHPLSCESLTLNDVKVFNPWY 285
Query: 64 APNTDGLD---------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+ N D LD +C+ ++G+ + +KSG D DG N+ ++ +
Sbjct: 286 SQNGDALDVESCKNVLVTNCFFDAGDDAICLKSGKDEDGRRRGESCENVIIKN-NTVLHG 344
Query: 115 CSGVGIGREMSGRIFNVTV 133
G IG EMSG + NV V
Sbjct: 345 HGGFVIGSEMSGGVRNVYV 363
>gi|373462557|ref|ZP_09554274.1| hypothetical protein HMPREF9944_02538 [Prevotella maculosa OT 289]
gi|371948030|gb|EHO65924.1| hypothetical protein HMPREF9944_02538 [Prevotella maculosa OT 289]
Length = 853
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 13/133 (9%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R L+ + + I I S +T SP IHP+ C+N V G+ + + PN DG DP+
Sbjct: 210 RPQLINFVKGNRIRI-SGVTLLRSPFWVIHPLLCKNVTVDGVKIWN--EGPNGDGCDPEG 266
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
+G+ +A+KSG ++DG +PS NI +R GV IG E+S
Sbjct: 267 CENVLIQNTLFHTGDDCIAIKSGRNNDGRFWNQPSKNIIIRNCV-MEDGHGGVVIGSEIS 325
Query: 126 GRIFNVTVNHLDV 138
G N+ ++
Sbjct: 326 GGCQNIYAEDCEM 338
>gi|346223842|ref|ZP_08844984.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 532
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 13/131 (9%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC 74
R + V S NIL+ +T SP IH VY +N V+ +TV S L + N DG+ D
Sbjct: 216 RPNFVVFWKSKNILV-EGITLNESPMWNIHLVYSQNAIVRDITVNS-LDSQNGDGVVVDS 273
Query: 75 ---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG--TTPTCSGVGIGRE 123
+ +G+ + +KSG++ DG+A+ P+ N+ +R GV G E
Sbjct: 274 SHDVLLEYNQLHTGDDAIVLKSGFNEDGLAINIPTENVVIRNYYAYKVRTGSGGVVFGSE 333
Query: 124 MSGRIFNVTVN 134
SG I NV V+
Sbjct: 334 TSGGIRNVYVH 344
>gi|317056840|ref|YP_004105307.1| glycoside hydrolase family protein [Ruminococcus albus 7]
gi|315449109|gb|ADU22673.1| glycoside hydrolase family 28 [Ruminococcus albus 7]
Length = 513
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Query: 6 WWNSTLKHT--RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
WW + + R L+ N ++ + +T CN+ S IHP + + + +P
Sbjct: 204 WWENVKERNIPRPRLL-FFNRCKLITVHGITVCNAASWQIHPYFSSYLHFLDLDITAPKD 262
Query: 64 APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+PNTD LDP+ C G+ +A+KSG G +P+ N +R
Sbjct: 263 SPNTDALDPEACDNVWISGCRFSVGDDCIAIKSGKIDIGRKFKQPAENHNIRNCLMQFGH 322
Query: 115 CSGVGIGREMSGRIFNVTVN 134
V +G EM+G + N+TV
Sbjct: 323 -GAVTLGSEMAGGVRNLTVE 341
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 119 GIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISFVNVVS 178
G + + R F + WM GSYK HP G+DPKA+P+IS I++ ++ +
Sbjct: 975 GYVKNIFARRFTMKTMKYVFWMT--GSYK------LHPVGGFDPKALPEISNINYRDMTA 1026
Query: 179 VNTTKAPVLAGIIGTQFEEICMKNVSLLV--QAPSVKWQCRFVSG 221
N T + L GI F +CM NV++ + ++W C VSG
Sbjct: 1027 ENVTISAKLEGIKNDPFTGLCMSNVTIALSPDPKKLQWNCTDVSG 1071
>gi|399029277|ref|ZP_10730250.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398072887|gb|EJL64081.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 563
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 11/131 (8%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD--- 71
R +V L+N +L+ +TF NSP+ ++P+ C N + + + +P + N DGLD
Sbjct: 235 RPVMVSLVNCKKLLL-DGVTFQNSPAWNVNPLMCENVTLSNLNIRNPWYSQNGDGLDLES 293
Query: 72 ------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
+C + G+ + +KSG D +G +P+ ++ G IG EMS
Sbjct: 294 CRIGTVTNCRFDVGDDAICIKSGKDQEGRERGKPTELFVIKDCV-VYHGHGGFVIGSEMS 352
Query: 126 GRIFNVTVNHL 136
G + N+ + +L
Sbjct: 353 GGVRNLFIKNL 363
>gi|300728050|ref|ZP_07061423.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299774652|gb|EFI71271.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 463
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 58/126 (46%), Gaps = 13/126 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R V N+LI TF SP +HP+ +N V+ + + S N DG DP+
Sbjct: 207 RPQFVNTYKCENVLI-EGPTFNRSPFWILHPLLSKNVIVRDVNLDS--HGRNNDGCDPES 263
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C +G+ +A+KSG D DG PS NI +R +GVGIG E++
Sbjct: 264 CENVLIERCRFNTGDDCIAIKSGKDEDGRVWNIPSKNIIIRNCE-MKDGHAGVGIGSEIT 322
Query: 126 GRIFNV 131
G NV
Sbjct: 323 GGCENV 328
>gi|227536102|ref|ZP_03966151.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
gi|227243999|gb|EEI94014.1| pectin lyase [Sphingobacterium spiritivorum ATCC 33300]
Length = 577
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD--- 71
R +L+ L N IL+ +TF NSP+ +HP+ C++ V+ + V +P A N DG+D
Sbjct: 245 RPNLLVLNNCKQILL-EGVTFQNSPAWNLHPLLCQDLTVRNVMVRNPWYAQNGDGIDIES 303
Query: 72 ------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
+ + G+ + +KSG D G A P+ N+ +R + G IG EMS
Sbjct: 304 CKNVLVENSTFDVGDDGICIKSGRDEAGRLRAVPTENVIIRN-NVVYHAHGGFVIGSEMS 362
Query: 126 GRIFNV 131
G N+
Sbjct: 363 GGARNI 368
>gi|300772072|ref|ZP_07081942.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300760375|gb|EFK57201.1| exo-poly-alpha-D-galacturonosidase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 570
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD--- 71
R +L+ L N IL+ +TF NSP+ +HP+ C++ V+ + V +P A N DG+D
Sbjct: 238 RPNLLVLNNCKQILL-EGVTFQNSPAWNLHPLLCQDLTVRNVMVRNPWYAQNGDGIDIES 296
Query: 72 ------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
+ + G+ + +KSG D G A P+ N+ +R + G IG EMS
Sbjct: 297 CKNVLVENSTFDVGDDGICIKSGRDEAGRLRAVPTENVIIRN-NVVYHAHGGFVIGSEMS 355
Query: 126 GRIFNV 131
G N+
Sbjct: 356 GGARNI 361
>gi|392939365|ref|ZP_10305009.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
gi|392291115|gb|EIV99558.1| endopolygalacturonase [Thermoanaerobacter siderophilus SR4]
Length = 519
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 66/143 (46%), Gaps = 14/143 (9%)
Query: 3 WDLWWNS-TLKHT--RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
++ WW +K R V L NILI +T NSP+ TIHP N +T+
Sbjct: 209 FETWWKEHKIKKGAWRPRTVFLNQCKNILI-EGVTIKNSPAWTIHPFQSENLKFINLTIE 267
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSG 110
+P ++PNTDGL+P+ C G+ +A+K+G + + + + VR
Sbjct: 268 NPKNSPNTDGLNPEASKNVLILGCKFSVGDDCIAIKAGKFDMAQKLGKLTEKVFVRNCY- 326
Query: 111 TTPTCSGVGIGREMSGRIFNVTV 133
GV IG EMSG + V V
Sbjct: 327 MEYGHGGVVIGSEMSGGVKEVYV 349
>gi|345513952|ref|ZP_08793467.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|423230893|ref|ZP_17217297.1| hypothetical protein HMPREF1063_03117 [Bacteroides dorei
CL02T00C15]
gi|423244604|ref|ZP_17225679.1| hypothetical protein HMPREF1064_01885 [Bacteroides dorei
CL02T12C06]
gi|229435766|gb|EEO45843.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|392630013|gb|EIY24015.1| hypothetical protein HMPREF1063_03117 [Bacteroides dorei
CL02T00C15]
gi|392641453|gb|EIY35229.1| hypothetical protein HMPREF1064_01885 [Bacteroides dorei
CL02T12C06]
Length = 463
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP-- 72
R + L NIL+ T SP IHP+ N V+ + + S N DG DP
Sbjct: 208 RPQFINLYKCKNILL-EGFTLNRSPFWLIHPLLSENITVRKVKMQS--HGYNNDGCDPES 264
Query: 73 -------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
DC ++G+ +A+KSG D DG PS NI VR +GV IG E++
Sbjct: 265 CRNVLIEDCDFDTGDDCIAIKSGRDEDGRYWNIPSENIIVRHCR-MKDGHAGVAIGSEVT 323
Query: 126 GRIFNV 131
G NV
Sbjct: 324 GGCRNV 329
>gi|198277537|ref|ZP_03210068.1| hypothetical protein BACPLE_03759 [Bacteroides plebeius DSM 17135]
gi|198270035|gb|EDY94305.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 466
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 14/126 (11%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R HL+ L N L+I +++ NS ++H + CRN + G+T+L+ L N DG+D D
Sbjct: 158 RPHLLTLTNVQK-LVIRDISVRNSAYWSVHLIGCRNAMIDGITILNDLKIRNGDGIDIDH 216
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C+IESG+ + +K+ + + ++ V + T+ +C+ V IG E
Sbjct: 217 SKDVRISNCFIESGDDCICLKNRREFEQYG---SCEDVVVTNCTMTSRSCA-VKIGSENM 272
Query: 126 GRIFNV 131
+I NV
Sbjct: 273 DKINNV 278
>gi|367067221|gb|AEX12820.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067223|gb|AEX12821.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067225|gb|AEX12822.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067227|gb|AEX12823.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067229|gb|AEX12824.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067231|gb|AEX12825.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067233|gb|AEX12826.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067235|gb|AEX12827.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067237|gb|AEX12828.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067239|gb|AEX12829.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067241|gb|AEX12830.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067243|gb|AEX12831.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067245|gb|AEX12832.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067247|gb|AEX12833.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067249|gb|AEX12834.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067251|gb|AEX12835.1| hypothetical protein 2_9627_01 [Pinus taeda]
gi|367067253|gb|AEX12836.1| hypothetical protein 2_9627_01 [Pinus taeda]
Length = 131
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 153 YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLVQAPS 211
YG HP ++P A+P + IS+ N+V+ N + A L GI F++IC+ NV++ + A +
Sbjct: 13 YGSHPDNKYNPDALPVVERISYSNIVATNVSVAGKLEGIAKAPFKDICLSNVTITMAAKA 72
Query: 212 VK--WQCRFVSGF 222
K W C ++ G
Sbjct: 73 KKYPWNCTYIHGL 85
>gi|423241479|ref|ZP_17222592.1| hypothetical protein HMPREF1065_03215 [Bacteroides dorei
CL03T12C01]
gi|392641372|gb|EIY35149.1| hypothetical protein HMPREF1065_03215 [Bacteroides dorei
CL03T12C01]
Length = 463
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP-- 72
R + L NIL+ T SP IHP+ N V+ + + S N DG DP
Sbjct: 208 RPQFINLYKCKNILL-EGFTLNRSPFWLIHPLLSENITVRKVKMQS--HGYNNDGCDPES 264
Query: 73 -------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
DC ++G+ +A+KSG D DG PS NI VR +GV IG E++
Sbjct: 265 CRNVLIEDCDFDTGDDCIAIKSGRDEDGRYWNIPSENIIVRHCR-MKDGHAGVAIGSEVT 323
Query: 126 GRIFNV 131
G NV
Sbjct: 324 GGCRNV 329
>gi|239628555|ref|ZP_04671586.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518701|gb|EEQ58567.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 716
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 13/128 (10%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R + ++ + S +L+ T NSP ++PV CR+ V G+T+ S N DG DP
Sbjct: 188 YLRPNFIQTIRCSRVLL-QGFTLKNSPMWQLNPVMCRSLTVDGVTLYS--HGANNDGCDP 244
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+ C ++G+ +++KSG D DG P N+ + + G+ +G E
Sbjct: 245 ESCNGVHIRNCRFDTGDDCISLKSGRDRDGRMAGIPCENVLIEN-NEFADGHGGIALGSE 303
Query: 124 MSGRIFNV 131
MSG I V
Sbjct: 304 MSGGIRRV 311
>gi|198276929|ref|ZP_03209460.1| hypothetical protein BACPLE_03134 [Bacteroides plebeius DSM 17135]
gi|198270454|gb|EDY94724.1| polygalacturonase (pectinase) [Bacteroides plebeius DSM 17135]
Length = 461
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 62/131 (47%), Gaps = 19/131 (14%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD- 71
H R HL+ NIL+ + SP TIH C +G V+ + V + N DG+D
Sbjct: 188 HLRPHLIHFNRCKNILL-EDFHIRQSPFWTIHLYLCNSGVVRHLDVQA--HGHNNDGIDL 244
Query: 72 --------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGI 120
+C + G+ V +K+G + D + PS NI VR ++G T +GI
Sbjct: 245 EMSRNFLIENCKFDQGDDAVVIKAGRNQDAWRLNTPSENIVVRDCDILNGHTL----LGI 300
Query: 121 GREMSGRIFNV 131
G E+SG + N+
Sbjct: 301 GSEISGGVRNI 311
>gi|255034418|ref|YP_003085039.1| glycoside hydrolase [Dyadobacter fermentans DSM 18053]
gi|254947174|gb|ACT91874.1| glycoside hydrolase family 28 [Dyadobacter fermentans DSM 18053]
Length = 528
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYIESGN 80
I +T N+P + PVYC N ++G+TV S + P DG+D + C + SG+
Sbjct: 234 IEGITLHNTPFWNVVPVYCDNVIIRGITVQS-VGIPRGDGIDIESSRNVLIEYCTLSSGD 292
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV 133
+K+G DGI + +P+ N+ +R G+ G E +G I NV V
Sbjct: 293 DCFTIKAGRGEDGIRVNKPTENVVIRHCLARE-GHGGITCGSETAGMIRNVYV 344
>gi|329957312|ref|ZP_08297832.1| polygalacturonase [Bacteroides clarus YIT 12056]
gi|328523025|gb|EGF50128.1| polygalacturonase [Bacteroides clarus YIT 12056]
Length = 452
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R +++ N+L+ +L +SP IHPV+C N V+ + + S + N DG DP
Sbjct: 201 YLRPCMIQFYGCKNVLV-EDLKIYDSPFWIIHPVFCDNVTVRNVYIDS--NNYNNDGCDP 257
Query: 73 D----CYIES-----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+ IE G+ +A+KSG D DG + + + N+ +R + IG E
Sbjct: 258 ESSTNVLIEGMDFNVGDDGIAIKSGRDQDGWRIGQATENVIIRNCHFAR---WAITIGSE 314
Query: 124 MSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTK 183
MSG + N+ + + + G Y G E + + I + + V++ T
Sbjct: 315 MSGGVRNIYIEDCKIDSCRNGIYFKSNLDRGGYFENLNMRRIE--ADVCLWGVINFRTNY 372
Query: 184 APVLAGIIGTQFEEICMKNVS 204
G T F IC+++V+
Sbjct: 373 HGYRGGNHPTLFRNICIEDVT 393
>gi|347531917|ref|YP_004838680.1| glycoside hydrolase family protein [Roseburia hominis A2-183]
gi|345502065|gb|AEN96748.1| glycoside hydrolase family 28 [Roseburia hominis A2-183]
Length = 518
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 14/151 (9%)
Query: 6 WWNST---LKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WW + + R ++ L NI + L F +SP+ IHP + + V +P
Sbjct: 210 WWKNEKVMVGAFRPRMLSLNRCRNIRV-QGLYFHDSPAWVIHPYFSDELLFCNLIVENPA 268
Query: 63 SAPNTDGLDPD-------CYIES--GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDGLDP+ C + G+ +AVKSG + G PSSNI V +
Sbjct: 269 KSPNTDGLDPESCRDVTICGVRFSLGDDCIAVKSGKIYMGRRYKTPSSNIHVYQCL-MEH 327
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVWMQQQG 144
V +G EM+G + N+ V + +G
Sbjct: 328 GHGAVTVGSEMAGGVNNLIVEKCRFYHTDRG 358
>gi|336404054|ref|ZP_08584754.1| hypothetical protein HMPREF0127_02067 [Bacteroides sp. 1_1_30]
gi|335943751|gb|EGN05584.1| hypothetical protein HMPREF0127_02067 [Bacteroides sp. 1_1_30]
Length = 460
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 58/131 (44%), Gaps = 19/131 (14%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD- 71
H R HL+ N+L+ SP TIH C G V+ + V + N DG+D
Sbjct: 204 HLRPHLIHFNRCKNVLL-DGFKIRESPFWTIHLYMCDGGLVRNLDVKA--HGDNNDGIDF 260
Query: 72 --------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGI 120
DC + G+ V +K+G + D + P NI +R + G T +GI
Sbjct: 261 EMSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGHTL----LGI 316
Query: 121 GREMSGRIFNV 131
G E+SG I N+
Sbjct: 317 GSEISGGIRNI 327
>gi|325298782|ref|YP_004258699.1| Polygalacturonase [Bacteroides salanitronis DSM 18170]
gi|324318335|gb|ADY36226.1| Polygalacturonase [Bacteroides salanitronis DSM 18170]
Length = 535
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 11/138 (7%)
Query: 7 WNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPN 66
WNS R L+ + +L+ +TF NSPS +HP+ C + V ++V +P + N
Sbjct: 230 WNSIRDWLRPVLLSFIKCKKVLL-EGVTFKNSPSWCLHPLSCEDLTVYNISVSNPWYSQN 288
Query: 67 TDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSG 117
D LD + ++G+ + +KSG D G P NI +R + G
Sbjct: 289 GDALDIESCNRVLVLNSSFDAGDDGICIKSGKDESGRRRGEPCQNIIIRD-NVVLHGHGG 347
Query: 118 VGIGREMSGRIFNVTVNH 135
+G EMSG + N+ V++
Sbjct: 348 FVVGSEMSGGVKNIYVDN 365
>gi|295086705|emb|CBK68228.1| Endopolygalacturonase [Bacteroides xylanisolvens XB1A]
Length = 460
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 58/131 (44%), Gaps = 19/131 (14%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD- 71
H R HL+ N+L+ SP TIH C G V+ + V + N DG+D
Sbjct: 204 HLRPHLIHFNRCKNVLL-DGFKIRESPFWTIHLYMCDGGLVRNLDVKA--HGDNNDGIDF 260
Query: 72 --------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGI 120
DC + G+ V +K+G + D + P NI +R + G T +GI
Sbjct: 261 EMSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGHTL----LGI 316
Query: 121 GREMSGRIFNV 131
G E+SG I N+
Sbjct: 317 GSEISGGIRNI 327
>gi|407684232|ref|YP_006799406.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'English Channel 673']
gi|407245843|gb|AFT75029.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'English Channel 673']
Length = 488
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 95/228 (41%), Gaps = 39/228 (17%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R ++ N+LI +T SP ++PV C+N V + S PN+DG DP
Sbjct: 233 YLRPPFIQPYRCENVLI-EGVTILRSPFWLVNPVLCKNVTVNDVYCKS--FGPNSDGCDP 289
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+ C ++G+ +A+KSG + DG + P SNI + GV IG E
Sbjct: 290 ESCTNVLISNCTFDTGDDCIAIKSGRNADGRRVNVPCSNIVIEHCE-MKAGHGGVVIGSE 348
Query: 124 MSGRIFNVTVNH-------LDVWMQQQ-------------------GSYKDRLRLYGHPK 157
+SG + N+ H LD ++ + G+ KD + + +
Sbjct: 349 ISGGVENLYAQHCTMSSPDLDRGIRIKTNSIRGGHLKNLNYRNIDIGTVKDAVVVNFFYE 408
Query: 158 EGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
EG P + I+ N+ + +A VL G T + + N+++
Sbjct: 409 EGDAGNFPPLLEDITIENLNVASANRAFVLRGYDHTPISGLTLNNITI 456
>gi|423239843|ref|ZP_17220958.1| hypothetical protein HMPREF1065_01581 [Bacteroides dorei
CL03T12C01]
gi|392645468|gb|EIY39195.1| hypothetical protein HMPREF1065_01581 [Bacteroides dorei
CL03T12C01]
Length = 1095
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 12/114 (10%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGF-VKGMTVLSPLSAPNTDGLDPD---------CYIESG 79
IS L N S +H +Y NGF + G+ + + P++DG+D D IE+
Sbjct: 844 ISGLKMINQASWCLHVLYT-NGFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIEAH 902
Query: 80 NGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV 133
+ +++KSG D DG + RPS NI + GV +G E+SG I NVT+
Sbjct: 903 DDCISIKSGRDEDGRRVGRPSENILIENCHFAY-GHGGVAMGSEISGDIRNVTI 955
>gi|409100257|ref|ZP_11220281.1| glycoside hydrolase family protein [Pedobacter agri PB92]
Length = 557
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD--- 71
R +L+ L N IL+ +TF NSP+ +HP+ C + ++ + V +P A N DG+D
Sbjct: 225 RPNLLVLTNCKQILL-EGVTFQNSPAWNLHPLLCEDLTLRNLQVKNPWFAQNGDGVDVES 283
Query: 72 -PDCYIES-----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
+ IE G+ + +KSG D G +P+ N+ +R + G +G EMS
Sbjct: 284 CKNVLIEGSTFDVGDDGICIKSGRDEAGRKRGKPTENVIIRN-NVVYHAHGGFVVGSEMS 342
Query: 126 GRIFNV 131
G N+
Sbjct: 343 GGAKNI 348
>gi|182416077|ref|YP_001821143.1| glycosyl hydrolase [Opitutus terrae PB90-1]
gi|177843291|gb|ACB77543.1| glycosyl hydrolase family 88 [Opitutus terrae PB90-1]
Length = 865
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 13/133 (9%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP-- 72
R + V+ NILI ++ SP +HPV +N V+ + + S PN DG DP
Sbjct: 604 RPNFVQPYRCKNILI-EGVSIIRSPMWELHPVLSQNITVRNVKITS--HGPNNDGFDPES 660
Query: 73 -------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
D ++G+ +A+KSG + DG + P+ N+ +RR GV +G E +
Sbjct: 661 CRDILVEDTLFDTGDDCIAIKSGRNGDGRRVNVPTENMVIRRCV-MKDGHGGVVLGSECT 719
Query: 126 GRIFNVTVNHLDV 138
G I N+ V ++
Sbjct: 720 GGIRNIFVEDCEM 732
>gi|359414685|ref|ZP_09207150.1| Polygalacturonase [Clostridium sp. DL-VIII]
gi|357173569|gb|EHJ01744.1| Polygalacturonase [Clostridium sp. DL-VIII]
Length = 487
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 66/144 (45%), Gaps = 14/144 (9%)
Query: 4 DLWWNSTLKHT---RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
D WW K R ++ L+ NIL+ S +T NSPS TIHP+ + + + +
Sbjct: 180 DNWWFEAKKKRIAWRPRMIFLVGCKNILVES-VTVKNSPSWTIHPLMSEDLKFINLYIEN 238
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P +PNTDGLDP+ G+ +A+KSG PS +I +R +
Sbjct: 239 PKDSPNTDGLDPESCKNVHILGVNFSVGDDCIAIKSGKIFISKIKTMPSQHIYIRNCNMN 298
Query: 112 TPTCSGVGIGREMSGRIFNVTVNH 135
V +G EMS I N+ V +
Sbjct: 299 FGH-GAVVLGSEMSSGINNIYVEN 321
>gi|423239876|ref|ZP_17220991.1| hypothetical protein HMPREF1065_01614 [Bacteroides dorei
CL03T12C01]
gi|392644865|gb|EIY38599.1| hypothetical protein HMPREF1065_01614 [Bacteroides dorei
CL03T12C01]
Length = 462
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD- 71
H R HL+ N+L+ SP TIH C G V+ + V + N DG+D
Sbjct: 204 HLRPHLIHFNRCKNVLL-DEFKIRQSPFWTIHLYMCDGGIVRNLDVKA--HGHNNDGIDL 260
Query: 72 --------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+C + G+ V +K+G + D + P NI +R + +GIG E
Sbjct: 261 EMSRNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCD-ILKGHTLLGIGSE 319
Query: 124 MSGRIFNVTVNH 135
MSG + NV +++
Sbjct: 320 MSGGVRNVYMHN 331
>gi|150002759|ref|YP_001297503.1| polygalacturonase [Bacteroides vulgatus ATCC 8482]
gi|149931183|gb|ABR37881.1| glycoside hydrolase family 28, candidate polygalacturonase
[Bacteroides vulgatus ATCC 8482]
Length = 462
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 13/132 (9%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD- 71
H R HL+ N+L+ SP TIH C G V+ + V + N DG+D
Sbjct: 204 HLRPHLIHFNRCKNVLL-DEFKIRQSPFWTIHLYMCDGGIVRNLDVKA--HGHNNDGIDL 260
Query: 72 --------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+C + G+ V +K+G + D + P NI +R + + +GIG E
Sbjct: 261 EMSRNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCN-ILKGHTLLGIGSE 319
Query: 124 MSGRIFNVTVNH 135
MSG + NV +++
Sbjct: 320 MSGGVRNVYMHN 331
>gi|390944044|ref|YP_006407805.1| endopolygalacturonase [Belliella baltica DSM 15883]
gi|390417472|gb|AFL85050.1| endopolygalacturonase [Belliella baltica DSM 15883]
Length = 570
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP-- 72
R +V + NS IL+ TF NSP+ IHP+ + ++ + V +P + N DGLD
Sbjct: 238 RPVMVSIKNSKRILL-DGPTFQNSPAWNIHPLMSEDIIIRNLNVRNPWYSQNGDGLDLES 296
Query: 73 -------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
D + G+ + KSG D DG P+ N+ V+ + G IG EMS
Sbjct: 297 CKNVLIYDNIFDVGDDAICFKSGKDQDGRDRGMPTENVVVKN-NIVYHGHGGFVIGSEMS 355
Query: 126 GRIFNVTV 133
G + NV +
Sbjct: 356 GGVRNVHI 363
>gi|212690918|ref|ZP_03299046.1| hypothetical protein BACDOR_00406 [Bacteroides dorei DSM 17855]
gi|212666150|gb|EEB26722.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 462
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD- 71
H R HL+ N+L+ SP TIH C G V+ + V + N DG+D
Sbjct: 204 HLRPHLIHFNRCKNVLL-DEFKIRQSPFWTIHLYMCDGGIVRNLDVKA--HGHNNDGIDL 260
Query: 72 --------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+C + G+ V +K+G + D + P NI +R + +GIG E
Sbjct: 261 EMSCNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCD-ILKGHTLLGIGSE 319
Query: 124 MSGRIFNVTVNH 135
MSG + NV +++
Sbjct: 320 MSGGVRNVYMHN 331
>gi|237712598|ref|ZP_04543079.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|423229037|ref|ZP_17215442.1| hypothetical protein HMPREF1063_01262 [Bacteroides dorei
CL02T00C15]
gi|423244877|ref|ZP_17225951.1| hypothetical protein HMPREF1064_02157 [Bacteroides dorei
CL02T12C06]
gi|229453919|gb|EEO59640.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|392634790|gb|EIY28702.1| hypothetical protein HMPREF1063_01262 [Bacteroides dorei
CL02T00C15]
gi|392640918|gb|EIY34709.1| hypothetical protein HMPREF1064_02157 [Bacteroides dorei
CL02T12C06]
Length = 462
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 19/135 (14%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD- 71
H R HL+ N+L+ SP TIH C G V+ + V + N DG+D
Sbjct: 204 HLRPHLIHFNRCKNVLL-DEFKIRQSPFWTIHLYMCDGGIVRNLDVKA--HGHNNDGIDL 260
Query: 72 --------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGI 120
+C + G+ V +K+G + D + P NI +R + G T +GI
Sbjct: 261 EMSCNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCDILKGHTL----LGI 316
Query: 121 GREMSGRIFNVTVNH 135
G EMSG + NV +++
Sbjct: 317 GSEMSGGVRNVYMHN 331
>gi|265752310|ref|ZP_06088103.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|263237102|gb|EEZ22572.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 1095
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 12/114 (10%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGF-VKGMTVLSPLSAPNTDGLDPD---------CYIESG 79
IS L N S +H +Y NGF + G+ + + P++DG+D D IE+
Sbjct: 844 ISGLKMINQASWCLHVLYT-NGFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIEAH 902
Query: 80 NGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV 133
+ +++KSG D DG + RPS NI + GV +G E+SG I NVT+
Sbjct: 903 DDCISIKSGRDEDGRRVGRPSENILIENCHFAY-GHGGVAMGSEISGDIRNVTI 955
>gi|423229002|ref|ZP_17215407.1| hypothetical protein HMPREF1063_01227 [Bacteroides dorei
CL02T00C15]
gi|423244841|ref|ZP_17225915.1| hypothetical protein HMPREF1064_02121 [Bacteroides dorei
CL02T12C06]
gi|392634755|gb|EIY28667.1| hypothetical protein HMPREF1063_01227 [Bacteroides dorei
CL02T00C15]
gi|392641228|gb|EIY35012.1| hypothetical protein HMPREF1064_02121 [Bacteroides dorei
CL02T12C06]
Length = 1095
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 12/114 (10%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGF-VKGMTVLSPLSAPNTDGLDPD---------CYIESG 79
IS L N S +H +Y NGF + G+ + + P++DG+D D IE+
Sbjct: 844 ISGLKMINQASWCLHVLYT-NGFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIEAH 902
Query: 80 NGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV 133
+ +++KSG D DG + RPS NI + GV +G E+SG I NVT+
Sbjct: 903 DDCISIKSGRDEDGRRVGRPSENILIENCHFAY-GHGGVAMGSEISGDIRNVTI 955
>gi|356565569|ref|XP_003551012.1| PREDICTED: probable polygalacturonase-like [Glycine max]
Length = 346
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 17 HLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD 71
+++E+M +I I SNLT NS S +HP+Y + ++G+T+L+P+ +PNTDG+D
Sbjct: 265 YMIEIMFFDHIQI-SNLTLINSLSLFVHPIYSSDIIIQGLTILAPIDSPNTDGID 318
>gi|265752277|ref|ZP_06088070.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
gi|263237069|gb|EEZ22539.1| polygalacturonase [Bacteroides sp. 3_1_33FAA]
Length = 462
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 19/135 (14%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD- 71
H R HL+ N+L+ SP TIH C G V+ + V + N DG+D
Sbjct: 204 HLRPHLIHFNRCKNVLL-DEFKIRQSPFWTIHLYMCDGGIVRNLDVKA--HGHNNDGIDL 260
Query: 72 --------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGI 120
+C + G+ V +K+G + D + P NI +R + G T +GI
Sbjct: 261 EMSCNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCDILKGHTL----LGI 316
Query: 121 GREMSGRIFNVTVNH 135
G EMSG + NV +++
Sbjct: 317 GSEMSGGVRNVYMHN 331
>gi|319643181|ref|ZP_07997809.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520529|ref|ZP_08799916.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|423315312|ref|ZP_17293242.1| hypothetical protein HMPREF1058_03854 [Bacteroides vulgatus
CL09T03C04]
gi|423315336|ref|ZP_17293266.1| hypothetical protein HMPREF1058_03878 [Bacteroides vulgatus
CL09T03C04]
gi|254835049|gb|EET15358.1| polygalacturonase [Bacteroides sp. 4_3_47FAA]
gi|317385085|gb|EFV66036.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392679549|gb|EIY72930.1| hypothetical protein HMPREF1058_03854 [Bacteroides vulgatus
CL09T03C04]
gi|392679573|gb|EIY72954.1| hypothetical protein HMPREF1058_03878 [Bacteroides vulgatus
CL09T03C04]
Length = 462
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD- 71
H R HL+ N+L+ SP TIH C G V+ + V + N DG+D
Sbjct: 204 HLRPHLIHFNRCKNVLL-DEFKIRQSPFWTIHLYMCDGGIVRNLDVKA--HGHNNDGIDL 260
Query: 72 --------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+C + G+ V +K+G + D + P NI +R + +GIG E
Sbjct: 261 EMSRNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRHCD-ILKGHTLLGIGSE 319
Query: 124 MSGRIFNVTVNH 135
MSG + NV +++
Sbjct: 320 MSGGVRNVYMHN 331
>gi|345512498|ref|ZP_08792024.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
gi|229435434|gb|EEO45511.1| polygalacturonase [Bacteroides dorei 5_1_36/D4]
Length = 462
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 13/132 (9%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD- 71
H R HL+ N+L+ SP T+H C G V+ + V + N DG+D
Sbjct: 204 HLRPHLIHFNRCKNVLL-DEFKIRQSPFWTVHLYMCDGGIVRNLDVKA--HGHNNDGIDL 260
Query: 72 --------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+C + G+ V +K+G + D + P NI VR + + +GIG E
Sbjct: 261 EMSRNFLIENCVFDQGDDAVVIKAGRNQDAWRLNTPCENIVVRHCN-ILKGHTLLGIGSE 319
Query: 124 MSGRIFNVTVNH 135
MSG + NV +++
Sbjct: 320 MSGGVRNVYMHN 331
>gi|212690884|ref|ZP_03299012.1| hypothetical protein BACDOR_00372 [Bacteroides dorei DSM 17855]
gi|345512466|ref|ZP_08791992.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|212666566|gb|EEB27138.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|229438023|gb|EEO48100.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
Length = 1095
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 12/114 (10%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGF-VKGMTVLSPLSAPNTDGLDPD---------CYIESG 79
IS L N S +H +Y NGF + G+ + + P++DG+D D IE+
Sbjct: 844 ISGLKMINQASWCLHVLYT-NGFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIEAH 902
Query: 80 NGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV 133
+ +++KSG D DG + RPS NI + GV +G E+SG I NVT+
Sbjct: 903 DDCISIKSGRDEDGRRVGRPSENILIENCHFAY-GHGGVAMGSEISGDIRNVTI 955
>gi|189467900|ref|ZP_03016685.1| hypothetical protein BACINT_04292 [Bacteroides intestinalis DSM
17393]
gi|189436164|gb|EDV05149.1| FG-GAP repeat protein [Bacteroides intestinalis DSM 17393]
Length = 1068
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 59/132 (44%), Gaps = 19/132 (14%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD--- 71
R HL+ N+L+ SP TIH C G V+ + V + N DG+D
Sbjct: 209 RPHLIHFNRCKNVLL-DQFKIRESPFWTIHLYMCDGGIVRNLDVYA--HGHNNDGVDLEM 265
Query: 72 ------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGR 122
DC + G+ V +K+G + D + P NI +R + G T +GIG
Sbjct: 266 SRNFLIEDCKFDQGDDAVVIKAGRNQDAWRLDTPCENIVIRNCDIIKGHTL----LGIGS 321
Query: 123 EMSGRIFNVTVN 134
EMSG I NV ++
Sbjct: 322 EMSGGIRNVYMH 333
>gi|325299780|ref|YP_004259697.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319333|gb|ADY37224.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 461
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 80/187 (42%), Gaps = 25/187 (13%)
Query: 12 KHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD 71
K R + L NIL+ T SP IHP+ N V+ + + S N DG D
Sbjct: 203 KGIRPQFINLYKCKNILL-EGFTLHRSPFWLIHPLLSENITVRKVILQS--HGRNNDGCD 259
Query: 72 PD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGR 122
P+ C ++G+ +A+KSG D DG PS NI VR +GV IG
Sbjct: 260 PESCKNVLIDSCSFDTGDDCIAIKSGRDEDGRYWNIPSENIIVRNCL-MKDGHAGVAIGS 318
Query: 123 EMSGRIFNVTVNHLDVWMQQQGSYKDR-LRLYGHPKEGWDPKAIPKISGISFVNVVSVNT 181
E++G NV V + + DR +R+ + + G + K I FV ++V
Sbjct: 319 EITGGCQNVWVENC----RMDSPELDRIIRIKSNSERGGEVKNI-------FVRDITVGE 367
Query: 182 TKAPVLA 188
K +L
Sbjct: 368 CKESILG 374
>gi|262408407|ref|ZP_06084954.1| pectate lyase [Bacteroides sp. 2_1_22]
gi|294646414|ref|ZP_06724057.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294807852|ref|ZP_06766636.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
gi|345508621|ref|ZP_08788247.1| pectate lyase [Bacteroides sp. D1]
gi|229445709|gb|EEO51500.1| pectate lyase [Bacteroides sp. D1]
gi|262353959|gb|EEZ03052.1| pectate lyase [Bacteroides sp. 2_1_22]
gi|292638241|gb|EFF56616.1| polygalacturonase (pectinase) [Bacteroides ovatus SD CC 2a]
gi|294444947|gb|EFG13630.1| polygalacturonase (pectinase) [Bacteroides xylanisolvens SD CC 1b]
Length = 460
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 58/131 (44%), Gaps = 19/131 (14%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD- 71
H R HL+ N+L+ SP TIH C G V+ + V + N DG+D
Sbjct: 204 HLRPHLIHFNRCKNVLL-DGFKIRESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDGIDF 260
Query: 72 --------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGI 120
DC + G+ V +K+G + D + P NI +R + G T +GI
Sbjct: 261 EMSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGHTL----LGI 316
Query: 121 GREMSGRIFNV 131
G E+SG I N+
Sbjct: 317 GSEISGGIRNI 327
>gi|347537471|ref|YP_004844896.1| glycoside hydrolase family protein [Flavobacterium branchiophilum
FL-15]
gi|345530629|emb|CCB70659.1| Glycoside hydrolase precursor, family 28 [Flavobacterium
branchiophilum FL-15]
Length = 475
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R + +E N+ + + N+P IHP+ + V G+ + S PN DG DP
Sbjct: 215 YLRPNFIEFFECKNVHL-KDFKIVNAPFWIIHPIKSNHVIVDGIHIES--HGPNNDGCDP 271
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+ C ++G+ +A+K+G D DG +A S NI ++ GV IG E
Sbjct: 272 EYSKNVIIRNCTFDTGDDCIAIKAGRDSDGRRVAIKSENILIQNCK-MFDGHGGVTIGSE 330
Query: 124 MSGRIFNVTV 133
+S + NV V
Sbjct: 331 ISAGVSNVFV 340
>gi|395803704|ref|ZP_10482948.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434258|gb|EJG00208.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 451
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 15/129 (11%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP-- 72
R +++ +N NIL+ N+ NSP +H + + ++G++ S N DG+DP
Sbjct: 196 RPQMIQFLNCKNILV-ENIRIENSPFWCLHLLKSESITIRGISYKSL--NHNNDGIDPEY 252
Query: 73 --DCYIES-----GNGLVAVKSGWDHDGIA-MARPSSNIAVRRVSGTTPTCSGVGIGREM 124
D IE+ G+ VA+K+G DH+G A A PS NI +R + GV IG EM
Sbjct: 253 AKDVLIENVTFDNGDDNVAIKAGRDHEGRANTATPSQNIIIRNCN--FKGLHGVVIGSEM 310
Query: 125 SGRIFNVTV 133
S + NV V
Sbjct: 311 SAGVQNVFV 319
>gi|357494033|ref|XP_003617305.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
gi|355518640|gb|AET00264.1| Glycoside hydrolase family 28 protein [Medicago truncatula]
Length = 156
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 24/128 (18%)
Query: 85 VKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT---VNHLDVWMQ 141
+KSGWD GI+ R SS+I +R VSG++P G+ E SGR+ NV + + V++
Sbjct: 1 MKSGWDKYGISYGRLSSSITIRHVSGSSPFIGIAGV-SETSGRVDNVNDMGIEYKCVYI- 58
Query: 142 QQGSYKDRLRLYG----HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEE 197
G K+ +++ G HP + D A+P + KA ++ G+ + F +
Sbjct: 59 -YGECKEGIQISGDVGDHPDDKCDLNALPIV--------------KAGLIQGMKNSPFTD 103
Query: 198 ICMKNVSL 205
IC+ +++L
Sbjct: 104 ICLSDINL 111
>gi|298482100|ref|ZP_07000288.1| glycoside Hydrolase Family 28 [Bacteroides sp. D22]
gi|298271657|gb|EFI13230.1| glycoside Hydrolase Family 28 [Bacteroides sp. D22]
Length = 460
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 13/128 (10%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD- 71
H R HL+ N+L+ SP TIH C G V+ + V + N DG+D
Sbjct: 204 HLRPHLIHFNRCKNVLL-DGFKIRESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDGIDF 260
Query: 72 --------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
DC + G+ V +K+G + D + P NI +R + +GIG E
Sbjct: 261 EMSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQ-ILKGHTLLGIGSE 319
Query: 124 MSGRIFNV 131
+SG I N+
Sbjct: 320 ISGGIRNI 327
>gi|414864494|tpg|DAA43051.1| TPA: hypothetical protein ZEAMMB73_419161 [Zea mays]
Length = 220
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNG 51
WD + LK TRGHL+EL+ S NI IISN+TF ++P +HP YC G
Sbjct: 168 WDKFHAKELKFTRGHLLELLYSDNI-IISNVTFVDAPYWNLHPTYCTYG 215
>gi|427383838|ref|ZP_18880558.1| hypothetical protein HMPREF9447_01591 [Bacteroides oleiciplenus YIT
12058]
gi|425728543|gb|EKU91401.1| hypothetical protein HMPREF9447_01591 [Bacteroides oleiciplenus YIT
12058]
Length = 1068
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 60/134 (44%), Gaps = 19/134 (14%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD- 71
H R HL+ N+L+ SP TIH C G V+ + V + N DG+D
Sbjct: 207 HLRPHLIHFNRCQNVLL-DQFKIRESPFWTIHLYLCDGGIVRNLDVRA--HGHNNDGVDL 263
Query: 72 --------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGI 120
+C + G+ V +K+G + D + P NI +R + G T +GI
Sbjct: 264 EMSRNFLVENCKFDQGDDAVVIKAGRNQDAWRLDTPCENIVIRNCDIIKGHTL----LGI 319
Query: 121 GREMSGRIFNVTVN 134
G EMSG I NV ++
Sbjct: 320 GSEMSGGIRNVYMH 333
>gi|407700483|ref|YP_006825270.1| glycoside hydrolase family protein [Alteromonas macleodii str.
'Black Sea 11']
gi|407249630|gb|AFT78815.1| glycoside hydrolase family 28 domain-containing protein
[Alteromonas macleodii str. 'Black Sea 11']
Length = 488
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 96/228 (42%), Gaps = 39/228 (17%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R ++ N+LI +T SP ++PV C+N V + S PN+DG DP
Sbjct: 233 YLRPPFIQPYRCENVLI-EGVTILRSPFWLVNPVLCKNVTVNDVYCKS--FGPNSDGCDP 289
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+ C ++G+ +A+KSG + DG + P SNI + GV IG E
Sbjct: 290 ESCTNVIISNCTFDTGDDCIAIKSGRNADGRRVNVPCSNIIIEHCE-MKAGHGGVVIGSE 348
Query: 124 MSGRIFNVTVNH-------LDVWMQQQ-------------------GSYKDRLRLYGHPK 157
+SG + N+ + LD ++ + G+ KD + + +
Sbjct: 349 ISGGVENLYAQYCTMSSPDLDRGIRIKTNSIRGGHLKNLNYRNIDIGTVKDAVVVNFFYE 408
Query: 158 EGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSL 205
EG P + I+ N+ V+ +A VL G T + + NV++
Sbjct: 409 EGDAGNFPPLLEDITIENLNVVSANRAFVLRGYDHTPISGLTLNNVTI 456
>gi|383114381|ref|ZP_09935145.1| hypothetical protein BSGG_1446 [Bacteroides sp. D2]
gi|313693911|gb|EFS30746.1| hypothetical protein BSGG_1446 [Bacteroides sp. D2]
Length = 460
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 13/128 (10%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD- 71
H R HL+ N+L+ SP TIH C G V+ + V + N DG+D
Sbjct: 204 HLRPHLIHFNRCKNVLL-DGFKIRESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDGIDF 260
Query: 72 --------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
DC + G+ V +K+G + D + P NI +R + +GIG E
Sbjct: 261 EMSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQ-ILKGHTLLGIGSE 319
Query: 124 MSGRIFNV 131
+SG I N+
Sbjct: 320 ISGGIRNI 327
>gi|299148459|ref|ZP_07041521.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
gi|298513220|gb|EFI37107.1| putative exo-poly-alpha-D-galacturonosidase [Bacteroides sp.
3_1_23]
Length = 461
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 58/131 (44%), Gaps = 19/131 (14%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD- 71
H R HL+ N+L+ SP TIH C G V+ + V + N DG+D
Sbjct: 205 HLRPHLIHFNRCKNVLL-DGFKIRESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDGIDF 261
Query: 72 --------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGI 120
DC + G+ V +K+G + D + P NI +R + G T +GI
Sbjct: 262 EMSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGHTL----LGI 317
Query: 121 GREMSGRIFNV 131
G E+SG I N+
Sbjct: 318 GSEISGGIRNI 328
>gi|160886940|ref|ZP_02067943.1| hypothetical protein BACOVA_04954 [Bacteroides ovatus ATCC 8483]
gi|237721224|ref|ZP_04551705.1| pectate lyase [Bacteroides sp. 2_2_4]
gi|423288954|ref|ZP_17267805.1| hypothetical protein HMPREF1069_02848 [Bacteroides ovatus
CL02T12C04]
gi|423294898|ref|ZP_17273025.1| hypothetical protein HMPREF1070_01690 [Bacteroides ovatus
CL03T12C18]
gi|156107351|gb|EDO09096.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
gi|229449020|gb|EEO54811.1| pectate lyase [Bacteroides sp. 2_2_4]
gi|392668718|gb|EIY62212.1| hypothetical protein HMPREF1069_02848 [Bacteroides ovatus
CL02T12C04]
gi|392676089|gb|EIY69530.1| hypothetical protein HMPREF1070_01690 [Bacteroides ovatus
CL03T12C18]
Length = 461
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 58/131 (44%), Gaps = 19/131 (14%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD- 71
H R HL+ N+L+ SP TIH C G V+ + V + N DG+D
Sbjct: 205 HLRPHLIHFNRCKNVLL-DGFKIRESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDGIDF 261
Query: 72 --------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGI 120
DC + G+ V +K+G + D + P NI +R + G T +GI
Sbjct: 262 EMSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGHTL----LGI 317
Query: 121 GREMSGRIFNV 131
G E+SG I N+
Sbjct: 318 GSEISGGIRNI 328
>gi|322434842|ref|YP_004217054.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321162569|gb|ADW68274.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 478
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 5 LWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS- 63
L W S R LV++ NSS+I I L S T+H Y + G+T+ +
Sbjct: 155 LRWASDYDARRPRLVQVFNSSHIKIGGGLLLRRSGFWTLHICYSTDVTADGLTIRNNEGG 214
Query: 64 -APNTDGLDPDC--YIESGNGLVAV-------KSGWDHDGIAMARPSSNIAVRRVSGTTP 113
P+TDG+D D +I + +AV K+G D DG+ + RP+ ++ +R S
Sbjct: 215 RGPSTDGIDIDSSKHIVVAHADIAVNDDALCLKAGRDSDGLRVNRPTEDVVLRD-STIRD 273
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDVW 139
+GV G E SG N+ +L V+
Sbjct: 274 GAAGVTFGSETSGGFRNIEAYNLKVF 299
>gi|445494990|ref|ZP_21462034.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
gi|444791151|gb|ELX12698.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
Length = 615
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 15/133 (11%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R +++L+ +N+L+ ++P HPV+CRN ++ + S PN+DG DP
Sbjct: 303 YLRPPMIQLIGCTNVLL-QGYHVTHTPFWQHHPVHCRNIVIRNVHCES--LGPNSDGFDP 359
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+ C ++G+ +A+K+G D D PS NI ++ + + V +G E
Sbjct: 360 EACDHVLIDGCTFDTGDDCIAIKAGKDLD--TQYGPSQNIVIQNCTMQSGH-GAVTLGSE 416
Query: 124 MSGRIFNVTVNHL 136
M+G I NV +L
Sbjct: 417 MAGGIQNVYAQNL 429
>gi|399031152|ref|ZP_10731291.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398070621|gb|EJL61913.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 562
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 11/130 (8%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD--- 71
R LV + NS ++ F NSP+ IHP+ + V+ +TV +P + N DGLD
Sbjct: 233 RPVLVSIQNSKRVMF-DGPVFQNSPAWNIHPLMIEDLIVRNVTVRNPWFSQNGDGLDVES 291
Query: 72 ------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
+ + G+ + +KSG D DG P NI V+ + GV +G EMS
Sbjct: 292 CKNVIVENSSFDVGDDAICIKSGKDKDGRDRGIPCENIIVKN-NIVYHGHGGVTVGSEMS 350
Query: 126 GRIFNVTVNH 135
G + N+ V++
Sbjct: 351 GGVKNLHVSN 360
>gi|167765390|ref|ZP_02437503.1| hypothetical protein BACSTE_03778 [Bacteroides stercoris ATCC
43183]
gi|167697018|gb|EDS13597.1| polygalacturonase (pectinase) [Bacteroides stercoris ATCC 43183]
Length = 452
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R +++ N+L+ +L +SP IHPV+C N V+ + + S + N DG DP
Sbjct: 201 YLRPCMIQFYGCKNVLV-EDLKIYDSPFWIIHPVFCDNVTVRNVYIDS--NNYNNDGCDP 257
Query: 73 D----CYIES-----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+ IE G+ +A+KSG D DG + + + N+ +R + +G E
Sbjct: 258 ESCTNVLIEGMDFNVGDDGIAIKSGRDQDGWRIGQATENVIIRNCHFAR---WAITVGSE 314
Query: 124 MSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTK 183
MSG + N+ + + + G Y G E + + I + + V++ T
Sbjct: 315 MSGGVRNIYIEDCKIDSCRNGIYFKSNPDRGGYFENLNMRRIE--ADVCLWGVINFRTNY 372
Query: 184 APVLAGIIGTQFEEICMKNVS 204
G T F IC+++V+
Sbjct: 373 HGYRGGNHPTLFRNICIEDVT 393
>gi|311748289|ref|ZP_07722074.1| exo-poly-alpha-D-galacturonosidase [Algoriphagus sp. PR1]
gi|126576785|gb|EAZ81033.1| exo-poly-alpha-D-galacturonosidase [Algoriphagus sp. PR1]
Length = 557
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 10/123 (8%)
Query: 22 MNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC------- 74
+ S +++ TF NSP+ IHP+ + ++ +TV +P + N DGLD +
Sbjct: 233 IRESKRVLLDGPTFQNSPAWNIHPLMSEDVIIRNLTVRNPWFSQNGDGLDLESCKNVLIY 292
Query: 75 --YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 132
+ G+ + KSG D DG P+ N+ V+ + G +G EMSG I NV
Sbjct: 293 NNTFDVGDDAICFKSGKDSDGRERGMPTENVIVKN-NIVYHGHGGFTVGSEMSGGIKNVH 351
Query: 133 VNH 135
V++
Sbjct: 352 VSN 354
>gi|150002783|ref|YP_001297527.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|294777287|ref|ZP_06742742.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|149931207|gb|ABR37905.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
gi|294448907|gb|EFG17452.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 1095
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 12/114 (10%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGF-VKGMTVLSPLSAPNTDGLDPD---------CYIESG 79
IS L N S +H +Y NGF + G+ + + P++DG+D D IE+
Sbjct: 844 ISGLKMINQASWCLHVLYT-NGFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIEAH 902
Query: 80 NGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV 133
+ +++KSG D DG + RPS NI + GV +G E+SG I NVT+
Sbjct: 903 DDCISIKSGRDEDGRRVGRPSENILIENCHFAY-GHGGVAMGSEISGGIRNVTI 955
>gi|237712628|ref|ZP_04543109.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229453949|gb|EEO59670.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 478
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 12/114 (10%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGF-VKGMTVLSPLSAPNTDGLDPD---------CYIESG 79
IS L N S +H +Y NGF + G+ + + P++DG+D D IE+
Sbjct: 227 ISGLKMINQASWCLHVLYT-NGFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIEAH 285
Query: 80 NGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV 133
+ +++KSG D DG + RPS NI + GV +G E+SG I NVT+
Sbjct: 286 DDCISIKSGRDEDGRRVGRPSENILIENCHFAYGH-GGVAMGSEISGDIRNVTI 338
>gi|423315483|ref|ZP_17293411.1| hypothetical protein HMPREF1058_04023 [Bacteroides vulgatus
CL09T03C04]
gi|392679286|gb|EIY72672.1| hypothetical protein HMPREF1058_04023 [Bacteroides vulgatus
CL09T03C04]
Length = 1095
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 12/114 (10%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGF-VKGMTVLSPLSAPNTDGLDPD---------CYIESG 79
IS L N S +H +Y NGF + G+ + + P++DG+D D IE+
Sbjct: 844 ISGLKMINQASWCLHVLYT-NGFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIEAH 902
Query: 80 NGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV 133
+ +++KSG D DG + RPS NI + GV +G E+SG I NVT+
Sbjct: 903 DDCISIKSGRDEDGRRVGRPSENILIENCHFAY-GHGGVAMGSEISGGIRNVTI 955
>gi|319643150|ref|ZP_07997780.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345520559|ref|ZP_08799946.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254835079|gb|EET15388.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317385228|gb|EFV66177.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 1095
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 12/114 (10%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGF-VKGMTVLSPLSAPNTDGLDPD---------CYIESG 79
IS L N S +H +Y NGF + G+ + + P++DG+D D IE+
Sbjct: 844 ISGLKMINQASWCLHVLYT-NGFTIDGIDIRALEYIPSSDGIDIDSSNDILITSTRIEAH 902
Query: 80 NGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV 133
+ +++KSG D DG + RPS NI + GV +G E+SG I NVT+
Sbjct: 903 DDCISIKSGRDEDGRRVGRPSENILIENCHFAY-GHGGVAMGSEISGGIRNVTI 955
>gi|224536236|ref|ZP_03676775.1| hypothetical protein BACCELL_01103 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522122|gb|EEF91227.1| hypothetical protein BACCELL_01103 [Bacteroides cellulosilyticus
DSM 14838]
Length = 456
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 17/201 (8%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R +++ N+L+ ++ +SP IHPV+C N V+ + + S + N DG DP
Sbjct: 201 YLRPCMIQFYGCKNVLV-EDVQIYDSPFWIIHPVFCDNVTVRNVYIDS--NNYNNDGCDP 257
Query: 73 D----CYIES-----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+ IE+ G+ +A+KSG D DG + + + N+ +R + IG E
Sbjct: 258 ESSTNVLIENMDFNVGDDGIAIKSGRDQDGWRIGQATENVIIRNCHFAR---WAITIGSE 314
Query: 124 MSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTK 183
MSG + N+ + + + G Y G E + + I + + V++ T
Sbjct: 315 MSGGVRNIFIEDCKIDSCRNGIYFKSNLDRGGYFENLNMRRIE--ADVCLWGVINFRTNY 372
Query: 184 APVLAGIIGTQFEEICMKNVS 204
G T F IC+++V+
Sbjct: 373 HGYRGGNHPTLFRNICIEDVT 393
>gi|395212459|ref|ZP_10399800.1| glycoside hydrolase [Pontibacter sp. BAB1700]
gi|394457168|gb|EJF11353.1| glycoside hydrolase [Pontibacter sp. BAB1700]
Length = 582
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 11/130 (8%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC 74
R +V L+N +L+ TF NSP+ IHP+ C + ++ +TV +P + N DGLD +
Sbjct: 252 RPVMVSLINCKKVLL-DGPTFQNSPAWNIHPLMCEDVTIRNLTVRNPWYSQNGDGLDLES 310
Query: 75 ---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
+ G+ + +KSG D G P+ N+ V+ + G +G EMS
Sbjct: 311 CKNSVIYNNTFDVGDDAICIKSGKDQHGRDRGIPTENVIVKN-NVVYHGHGGFVVGSEMS 369
Query: 126 GRIFNVTVNH 135
+ NV V++
Sbjct: 370 SGVKNVHVSN 379
>gi|423226065|ref|ZP_17212531.1| hypothetical protein HMPREF1062_04717 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392630583|gb|EIY24571.1| hypothetical protein HMPREF1062_04717 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 466
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 17/201 (8%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R +++ N+L+ ++ +SP IHPV+C N V+ + + S + N DG DP
Sbjct: 211 YLRPCMIQFYGCKNVLV-EDVQIYDSPFWIIHPVFCDNVTVRNVYIDS--NNYNNDGCDP 267
Query: 73 D----CYIES-----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+ IE+ G+ +A+KSG D DG + + + N+ +R + IG E
Sbjct: 268 ESSTNVLIENMDFNVGDDGIAIKSGRDQDGWRIGQATENVIIRNCHFAR---WAITIGSE 324
Query: 124 MSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTK 183
MSG + N+ + + + G Y G E + + I + + V++ T
Sbjct: 325 MSGGVRNIFIEDCKIDSCRNGIYFKSNLDRGGYFENLNMRRIE--ADVCLWGVINFRTNY 382
Query: 184 APVLAGIIGTQFEEICMKNVS 204
G T F IC+++V+
Sbjct: 383 HGYRGGNHPTLFRNICIEDVT 403
>gi|423221752|ref|ZP_17208222.1| hypothetical protein HMPREF1062_00408 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392645616|gb|EIY39340.1| hypothetical protein HMPREF1062_00408 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 461
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 59/130 (45%), Gaps = 13/130 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP-- 72
R + L NIL+ T +P IHP+ N ++ + + S N DG DP
Sbjct: 208 RPQFINLYKCKNILL-EGFTINRAPFWLIHPLLSENVTIRKVKMQS--HGYNNDGCDPES 264
Query: 73 -------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
DC ++G+ +A+KSG D DG PS NI VR +GV IG E++
Sbjct: 265 CNNVLIEDCDFDTGDDCIAIKSGRDEDGRFWNIPSENIIVRNCR-MKDGHAGVAIGSEVT 323
Query: 126 GRIFNVTVNH 135
G NV V +
Sbjct: 324 GGCRNVWVEN 333
>gi|395803621|ref|ZP_10482865.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395434175|gb|EJG00125.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 553
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 11/130 (8%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD--- 71
R LV + NS ++ F NSP+ +HP+ + V+ +TV +P + N DGLD
Sbjct: 229 RPVLVSIQNSKRVMF-DGPVFQNSPAWNLHPLLIEDLIVRNVTVRNPWFSQNGDGLDVES 287
Query: 72 ------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
+ + G+ + +KSG D DG P NI V+ + GV +G EMS
Sbjct: 288 CKNVIIENSSFDVGDDAICIKSGKDKDGRDRGVPCENIIVKN-NIVYHGHGGVTVGSEMS 346
Query: 126 GRIFNVTVNH 135
G + N+ V++
Sbjct: 347 GGVKNLHVSN 356
>gi|196228361|ref|ZP_03127228.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
gi|196227764|gb|EDY22267.1| Exo-poly-alpha-galacturonosidase [Chthoniobacter flavus Ellin428]
Length = 469
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 96/237 (40%), Gaps = 57/237 (24%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R L+ L + + + + +T NSP P +C + V+ +T+ SP APNTDG+DP
Sbjct: 209 RPFLITLRDCARVHL-QGVTLRNSPMFHFVPHHCHDVVVEDVTIFSPADAPNTDGIDPAN 267
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAV---RRVSGTTPTCSGVGIGR 122
C I++G+ +AVK G G+A P+ N+ V + + G GV IG
Sbjct: 268 SRDVLIRRCTIDTGDDNIAVKGG----GVAN-EPTENVTVTDCKFLHG-----HGVSIGS 317
Query: 123 EMSGRIFNVTVN---------------------------HLDVWMQQQGS------YKDR 149
E + N V + D+ M+ + + D
Sbjct: 318 ETEAGVRNFLVQRCAFENTGTALRIKSDRTRGGVVENVLYRDITMKNVETAITIFLFYDD 377
Query: 150 LRLYGHPKEGWDPKAIPKISGISFVNVVSVNTT-KAPVLAGIIGTQFEEICMKNVSL 205
+ HP+ K P + I+F +V TT KA L G+ + ++ +V +
Sbjct: 378 KKAAAHPELAPVTKQTPMVRNITFQKIVCHGTTRKAGELVGLPESPISDVVFDDVHI 434
>gi|85058593|ref|YP_454295.1| hypothetical protein SG0615 [Sodalis glossinidius str. 'morsitans']
gi|84779113|dbj|BAE73890.1| hypothetical protein [Sodalis glossinidius str. 'morsitans']
Length = 199
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 10/106 (9%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYIESGN 80
+ ++T NSP T H VY R+ +KG+ +++P A NTD +D D C + G+
Sbjct: 82 LEDITLQNSPFWTCHTVYSRDITLKGIKIINPADAINTDAIDLDSSENILIEECLFDVGD 141
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSG 126
V +KSG DG+ + P+ ++V + + G+ IG E +G
Sbjct: 142 DAVTLKSGSGADGLRINMPTRGVSVSQCK-ILASHGGIAIGSETAG 186
>gi|431798423|ref|YP_007225327.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430789188|gb|AGA79317.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 565
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 13/144 (9%)
Query: 4 DLWWNSTLKHTRGHLVELMNS---SNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
DL + L + L +M S N +++ TF NSP+ IHP+ N ++ + V +
Sbjct: 218 DLISDDELASVKDFLRPVMVSLVKCNKVLLDGPTFQNSPAWNIHPLMSENVVIRNLNVRN 277
Query: 61 PLSAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P + N DGLD + + G+ + KSG + DG P+ N+ V+ +
Sbjct: 278 PWYSQNGDGLDLESCKNALVYNNTFDVGDDAICFKSGKNQDGRDRGMPTENVIVKN-NTV 336
Query: 112 TPTCSGVGIGREMSGRIFNVTVNH 135
G +G EMSG + NV V++
Sbjct: 337 YHAHGGFVVGSEMSGGVRNVHVSN 360
>gi|374309036|ref|YP_005055466.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358751046|gb|AEU34436.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 471
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 18 LVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---- 73
L+E ++ N+ + T N +IHP YC N K +TV S DG+D D
Sbjct: 184 LLEFVSCRNVRVEDCFTSQND-MWSIHPTYCENITFKNVTVHS-----GADGIDVDSCKH 237
Query: 74 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 128
C ++ + +++KSG +G + RP+ ++ + + + +GIG E SG I
Sbjct: 238 VVIDGCDFDTHDDCISLKSGRGEEGYTILRPTEDVQISNCTFMDHFWACIGIGSETSGGI 297
Query: 129 FNVTVNH 135
NV VNH
Sbjct: 298 RNVRVNH 304
>gi|383120496|ref|ZP_09941224.1| hypothetical protein BSIG_2496 [Bacteroides sp. 1_1_6]
gi|382985014|gb|EES68535.2| hypothetical protein BSIG_2496 [Bacteroides sp. 1_1_6]
Length = 462
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 19/131 (14%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD- 71
H R HL+ N+++ SP TIH C G V+ + V + N DG+D
Sbjct: 204 HLRPHLIHFNRCKNVML-DGFKIRESPFWTIHLYMCDGGIVRNLDVRA--HGHNNDGIDF 260
Query: 72 --------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGI 120
DC + G+ V +K+G + D + P NI +R + G T +GI
Sbjct: 261 EMSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCRILKGHTL----LGI 316
Query: 121 GREMSGRIFNV 131
G E+SG I N+
Sbjct: 317 GSEISGGIRNI 327
>gi|380693882|ref|ZP_09858741.1| hypothetical protein BfaeM_07848 [Bacteroides faecis MAJ27]
Length = 454
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 19/131 (14%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD- 71
H R HL+ N+++ SP TIH C G V+ + V + N DG+D
Sbjct: 196 HLRPHLIHFNRCKNVML-DGFKIRESPFWTIHLYMCDGGMVRNLDVRA--HGHNNDGIDF 252
Query: 72 --------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGI 120
DC + G+ V +K+G + D + P NI +R + G T +GI
Sbjct: 253 EMSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCRILKGHTL----LGI 308
Query: 121 GREMSGRIFNV 131
G E+SG I N+
Sbjct: 309 GSEISGGIRNI 319
>gi|431797010|ref|YP_007223914.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
gi|430787775|gb|AGA77904.1| endopolygalacturonase [Echinicola vietnamensis DSM 17526]
Length = 455
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 16/141 (11%)
Query: 22 MNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD-------- 73
N +++ + NSP IHP ++ ++ + V + N DG+DP+
Sbjct: 212 FNRCEKVLLEGVKITNSPFWVIHPFMSKDVVIRDVQVFA--HGHNNDGVDPEMSQNMLIE 269
Query: 74 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 132
C + G+ +AVKSG + D + P+ NI +R S + IG E+SG + NV
Sbjct: 270 NCIFDQGDDAIAVKSGRNQDAWRLNMPTKNIVIRN-SLVKNGHQLLAIGSELSGGVENVY 328
Query: 133 VNHLDVWMQQQGSYKDRLRLY 153
+ + +V Q+G+ + L LY
Sbjct: 329 MENCEV---QEGAKLNHL-LY 345
>gi|298383811|ref|ZP_06993372.1| glycoside Hydrolase Family 28 [Bacteroides sp. 1_1_14]
gi|298263415|gb|EFI06278.1| glycoside Hydrolase Family 28 [Bacteroides sp. 1_1_14]
Length = 464
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 19/131 (14%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD- 71
H R HL+ N+++ SP TIH C G V+ + V + N DG+D
Sbjct: 206 HLRPHLIHFNRCKNVML-DGFKIRESPFWTIHLYMCDGGIVRNLDVRA--HGHNNDGIDF 262
Query: 72 --------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGI 120
DC + G+ V +K+G + D + P NI +R + G T +GI
Sbjct: 263 EMSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCRILKGHTL----LGI 318
Query: 121 GREMSGRIFNV 131
G E+SG I N+
Sbjct: 319 GSEISGGIRNI 329
>gi|307718144|ref|YP_003873676.1| hypothetical protein STHERM_c04310 [Spirochaeta thermophila DSM
6192]
gi|306531869|gb|ADN01403.1| hypothetical protein STHERM_c04310 [Spirochaeta thermophila DSM
6192]
Length = 462
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 10/122 (8%)
Query: 22 MNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD---------P 72
+ S ++I + NS H +Y +++G++ +P APNTDGL+
Sbjct: 168 VKDSRRVVIEGIVLRNSAFWNTHILYSDEVWIRGVSFENPPDAPNTDGLNVDSSRNVRIE 227
Query: 73 DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 132
DC + G+ + +KSG D DG + RP+ ++ +R G+ G E++G + NV
Sbjct: 228 DCTFDVGDDCLGLKSGIDEDGRRVGRPTEHVVIRGCI-MRRGHGGIVCGSEIAGGVRNVV 286
Query: 133 VN 134
V
Sbjct: 287 VT 288
>gi|261406667|ref|YP_003242908.1| glycoside hydrolase family protein [Paenibacillus sp. Y412MC10]
gi|261283130|gb|ACX65101.1| glycoside hydrolase family 28 [Paenibacillus sp. Y412MC10]
Length = 523
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 7 WNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPN 66
+ + R +L+ L N IL+ S TF NS + +HP ++ +TV +P A N
Sbjct: 190 YEPVRDYLRPNLLSLRNCKRILL-SGPTFQNSAAWCLHPWASEQITIQNITVRNPWYAQN 248
Query: 67 TDGLDPDC--YI-------ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSG 117
DGLD D Y+ + G+ + +KSG + G + +PS I++R + G
Sbjct: 249 GDGLDIDSCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERISIRNCT-VYHGHGG 307
Query: 118 VGIGREMSGRIFNVTVN 134
+ +G EMSG I +V V+
Sbjct: 308 IVVGSEMSGGIKDVYVS 324
>gi|410664607|ref|YP_006916978.1| polygalacturonase pga28A [Simiduia agarivorans SA1 = DSM 21679]
gi|409026964|gb|AFU99248.1| polygalacturonase pga28A [Simiduia agarivorans SA1 = DSM 21679]
Length = 466
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 12/121 (9%)
Query: 24 SSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------C 74
+ N + I +T NSP +HPV C + V+G+T S PN DG DP+ C
Sbjct: 231 ACNQVKIEGVTLVNSPFWLLHPVLCESVVVRGVTCRS--HGPNNDGCDPESCKNVLIEQC 288
Query: 75 YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVN 134
++G+ +A+KSG + DG + N+ VR G+ +G E+SG N+ +
Sbjct: 289 VFDTGDDCIALKSGRNEDGRRVGVAVENVVVRHCE-MRDGHGGLVLGSEISGGARNIFME 347
Query: 135 H 135
H
Sbjct: 348 H 348
>gi|413920258|gb|AFW60190.1| hypothetical protein ZEAMMB73_155387 [Zea mays]
Length = 163
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 30/130 (23%)
Query: 124 MSGRIFNVTVNHLDVWMQQQG-SYKDR-----------------------LRLYG----H 155
MSG I ++ VNHL + +G S+K + G H
Sbjct: 1 MSGGISDIHVNHLRIHDSSKGISFKTSPGRGGYIEDVVISEVQMENVHVGIEFTGNCSTH 60
Query: 156 PKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLVQAPS--VK 213
P + +DP +P I ++ N+ N + A VL+GI G F IC+ N++ + A S
Sbjct: 61 PDDSFDPSDLPAIDHVTMKNMAGTNISVAGVLSGIEGAPFTAICLSNLNFSMAAGSGPSS 120
Query: 214 WQCRFVSGFN 223
W C VSG++
Sbjct: 121 WSCSDVSGYS 130
>gi|29349563|ref|NP_813066.1| hypothetical protein BT_4155 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341473|gb|AAO79260.1| pectate lyase [Bacteroides thetaiotaomicron VPI-5482]
Length = 448
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 19/131 (14%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD- 71
H R HL+ N+++ SP TIH C G V+ + V + N DG+D
Sbjct: 193 HLRPHLIHFNRCKNVML-DGFKIRESPFWTIHLYMCDGGIVRNLDVRA--HGHNNDGIDF 249
Query: 72 --------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGI 120
DC + G+ V +K+G + D + P NI +R + G T +GI
Sbjct: 250 EMSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCRILKGHTL----LGI 305
Query: 121 GREMSGRIFNV 131
G E+SG I N+
Sbjct: 306 GSEISGGIRNI 316
>gi|418409920|ref|ZP_12983231.1| polygalacturonase-like protein [Agrobacterium tumefaciens 5A]
gi|358003969|gb|EHJ96299.1| polygalacturonase-like protein [Agrobacterium tumefaciens 5A]
Length = 523
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 33/162 (20%)
Query: 6 WWN------STLKHTRG-HLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTV 58
WW+ + RG HLV N + T N+PS T+HP C G+T+
Sbjct: 212 WWSWPKETRDGARRPRGLHLVSCRNVG----LFGFTIRNAPSWTVHPQGCETLKAAGLTI 267
Query: 59 LSPLSAPNTDGLDPD---------CYIESGNGLVAVKSG-----WDHDGIAMARPSS--N 102
+P ++PNTDG +P+ G+ +AVK+G + D +A R S +
Sbjct: 268 SAPHNSPNTDGFNPESCRNVTISGVRFSVGDDCIAVKAGKRGPNGEDDHLAETRGVSVRH 327
Query: 103 IAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG 144
+ R G G+ IG EMSG + NVTV D+ +G
Sbjct: 328 CLMERGHG------GLVIGSEMSGGVHNVTVEDCDMVGTDRG 363
>gi|399028719|ref|ZP_10729875.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398073555|gb|EJL64725.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 479
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 14/139 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD--- 71
R H++ ++ NI I ++ NS T+H V C + + G+T+L+ L N+DG+D
Sbjct: 154 RPHVLTIIGGKNIRI-KDVHIGNSAYWTVHLVGCNDVVISGITLLNSLKVRNSDGIDLDH 212
Query: 72 ------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
DCYIESG+ + +K+ + + NI V + T+ +C+ + IG E
Sbjct: 213 SKNVRISDCYIESGDDCICLKNRREFEEFGACE---NITVTNCTMTSSSCA-IKIGSENM 268
Query: 126 GRIFNVTVNHLDVWMQQQG 144
I V N+ + +G
Sbjct: 269 DAIRQVVFNNCIIKKSNRG 287
>gi|146300859|ref|YP_001195450.1| glycoside hydrolase [Flavobacterium johnsoniae UW101]
gi|146155277|gb|ABQ06131.1| Polygalacturonase-like protein; Glycoside hydrolase family 28
[Flavobacterium johnsoniae UW101]
Length = 479
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 14/130 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD--- 71
R H++ ++ NI I ++ NS TIH V C + + G+T+L+ L N+DG+D
Sbjct: 154 RPHVLTIIGGKNIRI-HDVHIGNSAYWTIHLVGCNDVVISGITLLNSLKVRNSDGIDLDH 212
Query: 72 ------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
DCYIESG+ + +K+ + + NI V + T+ +C+ + IG E
Sbjct: 213 SKNVRISDCYIESGDDCICLKNRREFEEFGACE---NITVTNCTMTSSSCA-IKIGSENM 268
Query: 126 GRIFNVTVNH 135
I V N+
Sbjct: 269 DAIRQVVFNN 278
>gi|315499125|ref|YP_004087929.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
gi|315417137|gb|ADU13778.1| glycoside hydrolase family 28 [Asticcacaulis excentricus CB 48]
Length = 512
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 3 WDLWWNSTLKHT---RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
+D WW R L+ ++ + I+ +T NSPS T+HP++ R + +
Sbjct: 202 FDTWWERPKARFIGWRPRLIFMVECEQV-ILQGMTLKNSPSWTVHPLFSRGLTFVDLRIE 260
Query: 60 SPLSAPNTDGLDPDCYIE---------SGNGLVAVKSGWDHDGIAMARPSSNIAVR-RVS 109
+P +PNTDGL+P+ + G+ +A+KSG I+MAR S R R+S
Sbjct: 261 APADSPNTDGLNPESSTDIVISGVDFAVGDDCIALKSG----KISMARRSVRPTRRVRIS 316
Query: 110 G--TTPTCSGVGIGREMSGRIFNVTVN 134
V IG EM+ +++++V
Sbjct: 317 NCRMKDGHGAVVIGSEMACGVYDISVQ 343
>gi|294776431|ref|ZP_06741909.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294449757|gb|EFG18279.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 424
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 13/132 (9%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD- 71
H R HL+ N+L+ SP TIH C G V+ + V + N DG+D
Sbjct: 166 HLRPHLIHFNRCKNVLL-DEFKIRQSPFWTIHLYMCDGGIVRNLDVKA--HGHNNDGIDL 222
Query: 72 --------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+C + G+ V +K+G + + + P NI +R + + +GIG E
Sbjct: 223 EMSRNFLIENCVFDQGDDAVVIKAGRNQNAWRLNTPCENIVIRHCN-ILKGHTLLGIGSE 281
Query: 124 MSGRIFNVTVNH 135
MSG + NV +++
Sbjct: 282 MSGGVRNVYMHN 293
>gi|386346149|ref|YP_006044398.1| glycoside hydrolase family protein [Spirochaeta thermophila DSM
6578]
gi|339411116|gb|AEJ60681.1| glycoside hydrolase family 28 [Spirochaeta thermophila DSM 6578]
Length = 462
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 10/122 (8%)
Query: 22 MNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD---------P 72
+ S ++I + NS H +Y +++G++ +P APNTDGL+
Sbjct: 168 VKDSRRVVIEGIILRNSAFWNTHILYSDEVWIRGVSFENPPDAPNTDGLNVDSSRNVRIE 227
Query: 73 DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 132
DC + G+ + +KSG D DG + RP+ ++ +R G+ G E++G + NV
Sbjct: 228 DCTFDVGDDCLGLKSGIDEDGRRVGRPTEHVVIRGCI-MRRGHGGIVCGSEIAGGVRNVV 286
Query: 133 VN 134
V
Sbjct: 287 VT 288
>gi|418938241|ref|ZP_13491792.1| glycoside hydrolase family 28 [Rhizobium sp. PDO1-076]
gi|375055025|gb|EHS51309.1| glycoside hydrolase family 28 [Rhizobium sp. PDO1-076]
Length = 503
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 10/141 (7%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W W T R ++ + +S +T NSPS TIHPV C + G+T+ +
Sbjct: 207 WWTWPKETRDGARRPRTIFLSDCRHVTLSGITVRNSPSWTIHPVLCEHVLAVGLTIRNDP 266
Query: 63 SAPNTDGLDPDCY---------IESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDGL+P+ I G+ +A+K+G RP+ + +R
Sbjct: 267 LSPNTDGLNPEASSDIRLIGLDISVGDDCIAIKAGKRDPRGGPDRPTRRVEIRNCL-MQL 325
Query: 114 TCSGVGIGREMSGRIFNVTVN 134
V +G EMS I +V+++
Sbjct: 326 GHGAVVMGSEMSRGIHDVSIS 346
>gi|395804711|ref|ZP_10483946.1| glycoside hydrolase [Flavobacterium sp. F52]
gi|395433099|gb|EJF99057.1| glycoside hydrolase [Flavobacterium sp. F52]
Length = 479
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 14/130 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD--- 71
R H++ ++ NI I ++ NS T+H V C + + G+T+L+ L N+DG+D
Sbjct: 154 RPHVLTIIGGKNIRI-KDVHIGNSAYWTVHLVGCNDVVISGITLLNSLKVRNSDGIDLDH 212
Query: 72 ------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
DCYIESG+ + +K+ + + NI V + T+ +C+ + IG E
Sbjct: 213 SKNVRISDCYIESGDDCICLKNRREFEEFGACE---NITVTNCTMTSSSCA-IKIGSENM 268
Query: 126 GRIFNVTVNH 135
I V N+
Sbjct: 269 DAIRQVVFNN 278
>gi|221210443|ref|ZP_03583423.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD1]
gi|221169399|gb|EEE01866.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD1]
Length = 665
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 15/135 (11%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R +VE + +N+L+ N N+P HP CRN ++G+T S PN DG DP
Sbjct: 333 YLRPCMVEFIGCTNVLM-ENYQTQNTPFWQHHPTACRNVVIRGVTTNS--IGPNNDGFDP 389
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
D C +G+ +A+KSG + D + P+ VR + + G+ +G E
Sbjct: 390 DACTDVLCEDCTFNTGDDCIAIKSGKNRD--TESGPAKRHLVRNCTMNS-GHGGITLGSE 446
Query: 124 MSGRIFNVTVNHLDV 138
M G + V +L +
Sbjct: 447 MGGGVEQVYATNLSM 461
>gi|325300073|ref|YP_004259990.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319626|gb|ADY37517.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 458
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 13/131 (9%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
H R HL+ ++L+ SP TIH C +G V+ + V + N DG+D
Sbjct: 202 HLRPHLIHFNRCKHVLL-DGFKIRQSPFWTIHLYMCNSGVVRNLDVQA--HGHNNDGIDF 258
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+ C + G+ V +KSG + D + P NI VR + +GIG E
Sbjct: 259 EMSRNFLVEHCTFDQGDDAVVIKSGRNQDAWRLNTPCENIVVRHCAIRKGHVL-LGIGSE 317
Query: 124 MSGRIFNVTVN 134
MSG + N+ ++
Sbjct: 318 MSGGVRNIYMH 328
>gi|313221288|emb|CBY32045.1| unnamed protein product [Oikopleura dioica]
Length = 278
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 6 WW---NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
WW + LK R L + + N I LT+ NSP TIH VY N + + +L+
Sbjct: 143 WWTRNSQNLKFERPRLFQCLFCKN-FKIEKLTWKNSPFWTIHFVYSENIEIADVAILAEH 201
Query: 63 SAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+ NTDG+D D +++ G+ ++A+KSG+D G P+ N+ V +
Sbjct: 202 ESRNTDGIDIDSSSNVHIHDVFVDVGDDVIALKSGFDFCGREFGMPTKNVLVE---NSVF 258
Query: 114 TCSGVGIGREMSG 126
IG EMSG
Sbjct: 259 INENFAIGSEMSG 271
>gi|255531066|ref|YP_003091438.1| glycoside hydrolase family protein [Pedobacter heparinus DSM 2366]
gi|255344050|gb|ACU03376.1| glycoside hydrolase family 28 [Pedobacter heparinus DSM 2366]
Length = 554
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 10/122 (8%)
Query: 21 LMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD------- 73
++N +++ +TF NSP+ +HP+ + ++ + +P A N DGLD +
Sbjct: 229 VLNRCKRVLLEGVTFQNSPAWNLHPLMSEDITIRNVYAKNPWYAQNGDGLDIESCKNVLV 288
Query: 74 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 131
+ G+ + +KSG D +G A P+ N+ +R S G IG EMSG N+
Sbjct: 289 EGSTFDVGDDGICIKSGRDAEGRKRAMPTENVVIRH-STVYHAHGGFVIGSEMSGGAKNI 347
Query: 132 TV 133
+
Sbjct: 348 FI 349
>gi|266623864|ref|ZP_06116799.1| exo-poly-alpha-D-galacturonosidase [Clostridium hathewayi DSM
13479]
gi|288864322|gb|EFC96620.1| exo-poly-alpha-D-galacturonosidase [Clostridium hathewayi DSM
13479]
Length = 438
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 21/183 (11%)
Query: 5 LWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS-PLS 63
L W R V +M SS I + ++T S IH Y + V G+ + S
Sbjct: 139 LRWACDYDCMRVRNVVIMESSRI-TLKDITSMRSGFWNIHICYSDHIHVDGIKIASCGGE 197
Query: 64 APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+P+TDG+D D C + + + +KSG D DGI + RP +I V+
Sbjct: 198 SPSTDGIDIDSCHDVLVENCVTDCNDDSICIKSGRDADGIRVNRPCHDITVQNCE--IRA 255
Query: 115 CSGVGIGREMSGRIFNVTVNHLDVWMQQQG-SYKDRLRLYGHPKEGWDPKAIPKISGISF 173
GV IG E+SG ++ +T+ +L G K + +G+ ++ ++ G+S
Sbjct: 256 GFGVTIGSEVSGGVYQITLKNLRYHGTDCGFRIKSSVARHGYIRD-------VRVEGLSM 308
Query: 174 VNV 176
VNV
Sbjct: 309 VNV 311
>gi|346224313|ref|ZP_08845455.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 572
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 28 LIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC---------YIES 78
+++ TF NSP+ IHP+ R+ ++ +TV +P + N DGLD + +
Sbjct: 252 VLLDGPTFQNSPAWNIHPLMSRDIIIRNLTVRNPWYSQNGDGLDLESCKNVLIYNNSFDV 311
Query: 79 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV 133
G+ + KSG + DG P+ N+ V+ + G IG EMSG + NV V
Sbjct: 312 GDDAICFKSGKNEDGRRRGVPTENVIVKN-NVVYHGHGGFVIGSEMSGGVRNVHV 365
>gi|414071001|ref|ZP_11406978.1| glycoside hydrolase [Pseudoalteromonas sp. Bsw20308]
gi|410806622|gb|EKS12611.1| glycoside hydrolase [Pseudoalteromonas sp. Bsw20308]
Length = 489
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 12/117 (10%)
Query: 26 NILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYI 76
N ++I +T NSP ++PV C + V +T S PN+DG DP+ C
Sbjct: 243 NNVLIEGITIKNSPFWLVNPVLCNSVTVCDVTFSS--HGPNSDGCDPESCNHVHIKNCVF 300
Query: 77 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV 133
++G+ +A+KSG + DG + S NI + GV IG E+SG + NV V
Sbjct: 301 DTGDDCIAIKSGRNADGRRVNTASQNIVIENCH-MKEGHGGVVIGSEISGGVNNVFV 356
>gi|359452816|ref|ZP_09242155.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
gi|358050136|dbj|GAA78404.1| glycoside hydrolase, family 77 [Pseudoalteromonas sp. BSi20495]
Length = 489
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 12/117 (10%)
Query: 26 NILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYI 76
N ++I +T NSP ++PV C + V +T S PN+DG DP+ C
Sbjct: 243 NNVLIEGITIKNSPFWLVNPVLCNSVTVCDVTFSS--HGPNSDGCDPESCNHVHIKNCVF 300
Query: 77 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV 133
++G+ +A+KSG + DG + S NI + GV IG E+SG + NV V
Sbjct: 301 DTGDDCIAIKSGRNADGRRVNTASQNIVIENCH-MKEGHGGVVIGSEISGGVNNVFV 356
>gi|256424869|ref|YP_003125522.1| glycoside hydrolase [Chitinophaga pinensis DSM 2588]
gi|256039777|gb|ACU63321.1| glycoside hydrolase family 28 [Chitinophaga pinensis DSM 2588]
Length = 521
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 12/128 (9%)
Query: 18 LVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---- 73
V +N N+ + L N+P I P+YC N ++G+TV S + P+ DG+D +
Sbjct: 209 FVSAVNCKNVYL-EGLQLENTPFWNIVPIYCDNVIIRGITVNS-VGIPSGDGIDIESSKN 266
Query: 74 -----CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 128
C + G+ +K+G DG+ + +P+ N+ + R S G+ +G E + I
Sbjct: 267 VLIEYCTLNCGDDCFTLKAGRGEDGLRIGKPTENVVI-RYSLARQGHGGITVGSETAAMI 325
Query: 129 FNVTVNHL 136
N+ V+ +
Sbjct: 326 RNLYVHDV 333
>gi|323450337|gb|EGB06219.1| hypothetical protein AURANDRAFT_65850 [Aureococcus anophagefferens]
Length = 417
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 21/135 (15%)
Query: 7 WNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAP- 65
WN+ + R H +EL S++ ++ +LT NS T+ P Y + + +T+L +
Sbjct: 140 WNNDAR--RAHFLELFFCSDV-VVEDLTITNSSQWTLRPSYSQRLDFRRLTILGSTTGAN 196
Query: 66 --NTDGLDP---------DCYIESGNGLVAVKSGWDHD----GIAMARPSSNIAVRRVSG 110
NTDG DP D Y E+G+ VAVKSG + D P NI V V
Sbjct: 197 HHNTDGFDPWASKDVTFADSYYEAGDDCVAVKSGKNDDPRPWEQECGVPCENIFVSNV-- 254
Query: 111 TTPTCSGVGIGREMS 125
T G+ +G E++
Sbjct: 255 TCAHAHGLTVGSEIA 269
>gi|388497356|gb|AFK36744.1| unknown [Lotus japonicus]
Length = 177
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 153 YG-HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLVQAPS 211
YG H + +DP A+P+I GI++ ++V+ T A L GI QF IC+ NV++ + A S
Sbjct: 57 YGSHADKNYDPNALPEIKGINYRDMVADEVTMAGNLEGISNDQFTGICIANVTISMAAKS 116
Query: 212 VK--WQCRFVSGF 222
K W C V G
Sbjct: 117 KKQPWTCSDVEGI 129
>gi|329925656|ref|ZP_08280474.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
gi|328939683|gb|EGG36026.1| polygalacturonase (pectinase) [Paenibacillus sp. HGF5]
Length = 523
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 11/131 (8%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R +L+ L N IL+ S TF NS + +HP ++ +TV +P A N DGLD
Sbjct: 196 YLRPNLLSLRNCKRILL-SGPTFQNSAAWCLHPWASEQITIQNITVRNPWYAQNGDGLDI 254
Query: 73 DC--YI-------ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
D Y+ + G+ + +KSG + G + +PS I +R + G+ +G E
Sbjct: 255 DSCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERIRIRNCT-VYHGHGGIVVGSE 313
Query: 124 MSGRIFNVTVN 134
MSG I +V V+
Sbjct: 314 MSGGIKDVYVS 324
>gi|224538432|ref|ZP_03678971.1| hypothetical protein BACCELL_03326 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519937|gb|EEF89042.1| hypothetical protein BACCELL_03326 [Bacteroides cellulosilyticus
DSM 14838]
Length = 435
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 59/130 (45%), Gaps = 13/130 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R + L NIL+ T +P IHP+ N ++ + + S N DG DP+
Sbjct: 182 RPQFINLYKCKNILL-EGFTINRAPFWLIHPLLSENVTIRKVKMQS--HGYNNDGCDPES 238
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C ++G+ +A+KSG D DG PS NI VR +GV IG E++
Sbjct: 239 CNNVLIEYCDFDTGDDCIAIKSGRDEDGRFWNIPSENIIVRNCR-MKDGHAGVAIGSEVT 297
Query: 126 GRIFNVTVNH 135
G NV V +
Sbjct: 298 GGCRNVWVEN 307
>gi|187919562|ref|YP_001888593.1| glycoside hydrolase [Burkholderia phytofirmans PsJN]
gi|187718000|gb|ACD19223.1| glycoside hydrolase family 28 [Burkholderia phytofirmans PsJN]
Length = 671
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 21/141 (14%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R +VE + +N+L+ N T N+P HP C+N ++G+T S PN DG DP
Sbjct: 339 YLRPCMVEFIGCTNVLM-ENYTTNNTPFWQHHPTDCKNVVIRGVTTNS--IGPNNDGFDP 395
Query: 73 DC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRV---SGTTPTCSGVGI 120
D +G+ +A+KSG D D P+ N ++ SG G+ +
Sbjct: 396 DACNNVLCDSVTFNTGDDCIAIKSGKDLD--TQYGPAQNHVIQNCIMNSGH----GGITL 449
Query: 121 GREMSGRIFNVTVNHLDVWMQ 141
G EM G + N+ +L + Q
Sbjct: 450 GSEMGGGVQNIYARNLQMLNQ 470
>gi|300726353|ref|ZP_07059805.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
gi|299776378|gb|EFI72936.1| glycoside hydrolase, family 28 [Prevotella bryantii B14]
Length = 464
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 61/132 (46%), Gaps = 14/132 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP-- 72
R L++L S NI + + NSP IH + N + + + L N DG+DP
Sbjct: 204 RPQLIQLYQSKNI-TLEGVKIINSPFWCIHLLKSENIICRRLRYDAKLV--NNDGIDPEM 260
Query: 73 -------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
D + +G+ VA+KSG D+DG A P+ NI +R V IG EMS
Sbjct: 261 SRNILIEDIHFNNGDDNVAIKSGRDNDGWHDACPAENIVIRNCH--FKGLHAVVIGSEMS 318
Query: 126 GRIFNVTVNHLD 137
+ NV V + D
Sbjct: 319 AGVRNVFVENCD 330
>gi|420246079|ref|ZP_14749578.1| endopolygalacturonase, partial [Rhizobium sp. CF080]
gi|398043755|gb|EJL36633.1| endopolygalacturonase, partial [Rhizobium sp. CF080]
Length = 441
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 10/142 (7%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPL 62
W W T + R +++ + +S LT NSPS T+HPV C+ +T+ +
Sbjct: 207 WWSWPKETRQGARRARTVFLSACEDVTLSGLTIRNSPSWTVHPVLCKGLIAADLTIENDP 266
Query: 63 SAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
+PNTDG +P+ +I G+ +A+K+G RP+ ++ +
Sbjct: 267 DSPNTDGFNPESSSDIRLVGLHISVGDDCIALKAGKRSPLGGPDRPTEHVRIENCL-MER 325
Query: 114 TCSGVGIGREMSGRIFNVTVNH 135
V IG EMS I ++ + +
Sbjct: 326 GHGAVVIGSEMSAGISDIAIRN 347
>gi|294777707|ref|ZP_06743158.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294448775|gb|EFG17324.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 470
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 14/139 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R H++ L+N+ +I ++T NS TIH + C + + G+++L+ L N DG+D D
Sbjct: 160 RPHVLTLINAEKT-VIRDITIRNSAYWTIHLIGCYDALIDGISLLNNLKIRNGDGIDVDH 218
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C+IESG+ + +K+ + + +I V T+ +C+ + IG E
Sbjct: 219 SKKVRIANCFIESGDDCICLKNRREFEEYG---SCEDIVVTNCVMTSRSCA-IKIGSENM 274
Query: 126 GRIFNVTVNHLDVWMQQQG 144
+I NV N+ + +G
Sbjct: 275 DKIDNVLFNNCIIKNSNRG 293
>gi|329962597|ref|ZP_08300545.1| polygalacturonase [Bacteroides fluxus YIT 12057]
gi|328529628|gb|EGF56526.1| polygalacturonase [Bacteroides fluxus YIT 12057]
Length = 454
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R +++ N+L+ ++ +SP IHPV+C N V+ + + S + N DG DP
Sbjct: 199 YLRPCMIQFYGCKNVLV-EDVRIFDSPFWIIHPVFCNNVTVRNIYIDS--NNYNNDGCDP 255
Query: 73 D----CYIES-----GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+ IE+ G+ +A+KSG D DG + + + N+ +R + IG E
Sbjct: 256 ESCTNVLIENMDFNVGDDGIAIKSGRDQDGWRIGQATENVIIRNCHFAR---WAITIGSE 312
Query: 124 MSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTTK 183
SG + NV + + + G Y G E + + I + + VV+ T
Sbjct: 313 TSGGVRNVYIEDCKIDSCRNGIYFKSNLDRGGYFENLNMRRIE--ADVCLWGVVNFRTNY 370
Query: 184 APVLAGIIGTQFEEICMKNVS 204
G T F IC+++++
Sbjct: 371 HGYRGGNHPTLFRNICIEDIN 391
>gi|212695103|ref|ZP_03303231.1| hypothetical protein BACDOR_04641 [Bacteroides dorei DSM 17855]
gi|212662419|gb|EEB22993.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 532
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 26/141 (18%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGM---TVLSPLSA-----PN 66
RG ++ LMN NI + +TF SP+ +H +YC +K + T P + N
Sbjct: 246 RGRILSLMNGENICL-EGVTFLQSPAWGVHFIYCMGVTIKDVYINTRFDPETGRKYKIHN 304
Query: 67 TDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAV---RRVSGTTPT 114
DGL D I S + V++KSG D+DG +A+ + N+ + + + G
Sbjct: 305 GDGLTIDSSKDIVVYNTTISSQDDNVSIKSGRDNDGRRVAKSTDNVKLFDCKFLGGF--- 361
Query: 115 CSGVGIGREMSGRIFNVTVNH 135
GV +G EM+G + NV VN+
Sbjct: 362 --GVVVGSEMAGNVRNVLVNN 380
>gi|320106925|ref|YP_004182515.1| glycoside hydrolase family protein [Terriglobus saanensis SP1PR4]
gi|319925446|gb|ADV82521.1| glycoside hydrolase family 28 [Terriglobus saanensis SP1PR4]
Length = 460
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 13/146 (8%)
Query: 7 WNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSA-- 64
W + R L+++ NSS + + S L S T+H Y + + G+T+ +
Sbjct: 162 WAADYDSKRPRLIQVFNSSQVKL-SGLMLRRSGFWTVHICYSHDVTLDGLTIRNNEGGRG 220
Query: 65 PNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC 115
P+TDG+D D I + + +K+G D DG+ + RP+ +I +R S
Sbjct: 221 PSTDGIDIDSSKKVLVQHADIAVNDDALCLKAGRDSDGLRVNRPTEDIVLRD-SVIRDGA 279
Query: 116 SGVGIGREMSGRIFNVTVNHLDVWMQ 141
+GV IG E SG N+ L V Q
Sbjct: 280 AGVTIGSETSGGFRNIEAYGLTVLKQ 305
>gi|194695268|gb|ACF81718.1| unknown [Zea mays]
Length = 120
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 155 HPKEGWDPKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLVQAPS--V 212
HP + +DP +P I ++ N+ N + A VL+GI G F IC+ N++ + A S
Sbjct: 17 HPDDSFDPSDLPAIDHVTMKNMAGTNISVAGVLSGIEGAPFTAICLSNLNFSMAAGSGPS 76
Query: 213 KWQCRFVSGFN 223
W C VSG++
Sbjct: 77 SWSCSDVSGYS 87
>gi|336415457|ref|ZP_08595796.1| hypothetical protein HMPREF1017_02904 [Bacteroides ovatus
3_8_47FAA]
gi|335940336|gb|EGN02203.1| hypothetical protein HMPREF1017_02904 [Bacteroides ovatus
3_8_47FAA]
Length = 461
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 57/131 (43%), Gaps = 19/131 (14%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD- 71
H R HL+ N+L+ SP TIH C G V+ + V + N D +D
Sbjct: 205 HLRPHLIHFNRCKNVLL-DGFKIRESPFWTIHLYMCDGGLVRNLDVKA--HGHNNDDIDF 261
Query: 72 --------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGI 120
DC + G+ V +K+G + D + P NI +R + G T +GI
Sbjct: 262 EMSRNFLVEDCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQILKGHTL----LGI 317
Query: 121 GREMSGRIFNV 131
G E+SG I N+
Sbjct: 318 GSEISGGIRNI 328
>gi|237708712|ref|ZP_04539193.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|265756017|ref|ZP_06090484.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|345513499|ref|ZP_08793020.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|423242356|ref|ZP_17223465.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
gi|229437348|gb|EEO47425.1| glycoside hydrolase family 28 protein [Bacteroides dorei 5_1_36/D4]
gi|229457138|gb|EEO62859.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|263234095|gb|EEZ19696.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|392639642|gb|EIY33458.1| hypothetical protein HMPREF1065_04088 [Bacteroides dorei
CL03T12C01]
Length = 539
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 26 NILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC---------YI 76
N +++ TF NSPS +HP+ C N + +TV +P + N D LD +
Sbjct: 251 NKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLESCNKALIINNSF 310
Query: 77 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
++G+ + +KSG D G P N+ V + G +G EMSG + N+ V++
Sbjct: 311 DAGDDGICIKSGKDEQGRKRGEPCQNVIVMN-NTVLHGHGGFVVGSEMSGGVNNIYVDN 368
>gi|212693553|ref|ZP_03301681.1| hypothetical protein BACDOR_03070 [Bacteroides dorei DSM 17855]
gi|212663806|gb|EEB24380.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 539
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 26 NILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC---------YI 76
N +++ TF NSPS +HP+ C N + +TV +P + N D LD +
Sbjct: 251 NKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLESCNKALIINNSF 310
Query: 77 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
++G+ + +KSG D G P N+ V + G +G EMSG + N+ V++
Sbjct: 311 DAGDDGICIKSGKDEQGRKRGEPCQNVIVMN-NTVLHGHGGFVVGSEMSGGVNNIYVDN 368
>gi|150004535|ref|YP_001299279.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|319643966|ref|ZP_07998541.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|345518227|ref|ZP_08797681.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|423312455|ref|ZP_17290392.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
gi|149932959|gb|ABR39657.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
gi|254835520|gb|EET15829.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|317384490|gb|EFV65457.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|392688143|gb|EIY81432.1| hypothetical protein HMPREF1058_01004 [Bacteroides vulgatus
CL09T03C04]
Length = 539
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 26 NILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC---------YI 76
N +++ TF NSPS +HP+ C N + +TV +P + N D LD +
Sbjct: 251 NKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLESCNKALIINNSF 310
Query: 77 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
++G+ + +KSG D G P N+ V + G +G EMSG + N+ V++
Sbjct: 311 DAGDDGICIKSGKDEQGRKRGEPCQNVIVMN-NTVLHGHGGFVVGSEMSGGVNNIYVDN 368
>gi|357055786|ref|ZP_09116847.1| hypothetical protein HMPREF9467_03819 [Clostridium clostridioforme
2_1_49FAA]
gi|355381906|gb|EHG29017.1| hypothetical protein HMPREF9467_03819 [Clostridium clostridioforme
2_1_49FAA]
Length = 456
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 96/227 (42%), Gaps = 44/227 (19%)
Query: 26 NILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYI 76
N + ++ N+P T+HP C + + G+ +L+ L+ N+DG+DPD C++
Sbjct: 152 NHISFKDVIMRNAPFWTLHPAGCDDVLISGLRILNDLNVANSDGIDPDHSTNVRIIGCHV 211
Query: 77 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNHL 136
+ + +KS G P N+ + + T T + + IG E +G NV V++
Sbjct: 212 TCADDCICLKSS---SGNMEYGPLKNVIISGCT-LTSTSAALKIGTEGTGDFENVVVDNC 267
Query: 137 DVWMQQQG--------------SYKDRLRLYGHPKEGW----DPKAIP-----------K 167
+ +G S+ + + E W +P I
Sbjct: 268 IISDSNRGISIQIRDGGNVRNVSFSNIIIETRRFAECWWGCAEPITISTHDRDEHTKSGH 327
Query: 168 ISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLVQAPSVKW 214
IS + F N ++ ++ L+G G E+I +NV ++V+A S KW
Sbjct: 328 ISNVRFSN-ITCDSENGVFLSGSRGNHIEDILFENVRVVVRAKS-KW 372
>gi|170695826|ref|ZP_02886967.1| glycoside hydrolase family 28 [Burkholderia graminis C4D1M]
gi|170139250|gb|EDT07437.1| glycoside hydrolase family 28 [Burkholderia graminis C4D1M]
Length = 667
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 15/139 (10%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R +VE + +N+L+ N N+P HP C+N ++G+T S PN DG DP
Sbjct: 335 YLRPCMVEFIGCTNVLM-ENYATNNTPFWQHHPTDCKNVVIRGVTTNS--IGPNNDGFDP 391
Query: 73 DC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
D +G+ +A+KSG D D P+ N ++ + + G+ +G E
Sbjct: 392 DACDNVLCDGVTFNTGDDCIAIKSGKDLD--TQYGPAQNHVIQNCTMNS-GHGGITLGSE 448
Query: 124 MSGRIFNVTVNHLDVWMQQ 142
M G + N+ +L + Q
Sbjct: 449 MGGGVQNIYARNLQMLNQN 467
>gi|160884725|ref|ZP_02065728.1| hypothetical protein BACOVA_02714 [Bacteroides ovatus ATCC 8483]
gi|156109760|gb|EDO11505.1| polygalacturonase (pectinase) [Bacteroides ovatus ATCC 8483]
Length = 527
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 22 MNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD-------- 73
+N +N+LI +T S + P+YC N ++G+TV S + P+ DG+D +
Sbjct: 208 INCTNVLI-EGITMERSTFWNVCPIYCENVIIRGITVNS-IGIPSGDGIDIESCKNVLIE 265
Query: 74 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 132
C + G+ +K+G DG+ + +P+ N+ + R S GV G E +G + NV
Sbjct: 266 YCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVI-RYSLAQQGHGGVTCGSETAGGVKNVY 324
Query: 133 VN 134
V+
Sbjct: 325 VH 326
>gi|423228811|ref|ZP_17215217.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
gi|423247623|ref|ZP_17228671.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392631516|gb|EIY25487.1| hypothetical protein HMPREF1064_04877 [Bacteroides dorei
CL02T12C06]
gi|392635550|gb|EIY29449.1| hypothetical protein HMPREF1063_01037 [Bacteroides dorei
CL02T00C15]
Length = 539
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 26 NILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC---------YI 76
N +++ TF NSPS +HP+ C N + +TV +P + N D LD +
Sbjct: 251 NKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLESCNKALIINNSF 310
Query: 77 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
++G+ + +KSG D G P N+ V + G +G EMSG + N+ V++
Sbjct: 311 DAGDDGICIKSGKDEQGRKRGEPCQNVIVMN-NTVLHGHGGFVVGSEMSGGVNNIYVDN 368
>gi|325103067|ref|YP_004272721.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324971915|gb|ADY50899.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 528
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 12/122 (9%)
Query: 22 MNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD-------- 73
+N NILI ++ +P + P+YC N ++G+TV S + P DG+D +
Sbjct: 232 INCKNILI-EGISLERTPFWNVVPIYCENVIIRGITVNS-VGIPRGDGIDIESSKNVLIE 289
Query: 74 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 132
C + G+ +K+G DG+ + +P+ N+ VR G+ +G E + +I N+
Sbjct: 290 YCTLSCGDDCFTMKAGRGEDGLRVNKPTENVVVRFCLAKE-GHGGITVGSETAAKINNLY 348
Query: 133 VN 134
V+
Sbjct: 349 VH 350
>gi|408501581|ref|YP_006865500.1| pectinesterase [Bifidobacterium asteroides PRL2011]
gi|408466405|gb|AFU71934.1| pectinesterase [Bifidobacterium asteroides PRL2011]
Length = 1519
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 54/105 (51%), Gaps = 18/105 (17%)
Query: 42 TIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHD 92
T+ PVY ++ G+ +++ S N DG DP+ +G+ A+KSG D +
Sbjct: 319 TVVPVYSKDITAYGLQLVT--SVHNGDGFDPNSSSNVWILGTSFSTGDDCSAIKSGKDAE 376
Query: 93 GIAMARPSSNIAVRRV---SGTTPTCSGVGIGREMSGRIFNVTVN 134
GIA+ARPS NI R SG GV IG EMSG + NV V
Sbjct: 377 GIAIARPSENIYFRGDVFNSG----HGGVTIGSEMSGGVRNVFVE 417
>gi|294778294|ref|ZP_06743720.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294447922|gb|EFG16496.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 539
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 26 NILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC---------YI 76
N +++ TF NSPS +HP+ C N + +TV +P + N D LD +
Sbjct: 251 NKVLLEGATFKNSPSWCLHPLSCENITINKVTVSNPWYSQNGDALDLESCNKALIINNSF 310
Query: 77 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
++G+ + +KSG D G P N+ V + G +G EMSG + N+ V++
Sbjct: 311 DAGDDGICIKSGKDEQGRKRGEPCQNVIVMN-NTVLHGHGGFVVGSEMSGGVNNIYVDN 368
>gi|116623151|ref|YP_825307.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116226313|gb|ABJ85022.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 436
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 31/163 (19%)
Query: 3 WDLWWNSTLKH--------------TRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYC 48
WDL+W + R L+++ S + ++S LT T+H Y
Sbjct: 132 WDLYWKMRREEYEPKGLRWAVDYDCRRPRLIQIYKSQGVDLVS-LTLKRPGFWTVHICYS 190
Query: 49 RNGFVKGMTVLSPLSA--PNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMA 97
V G+T+ + P+TDG+D D C I+ + + +K+G D DG+ +
Sbjct: 191 ERVTVDGLTIRNNTDGKGPSTDGIDIDSSSDVLVAHCDIDCNDDAICLKAGRDADGLRVN 250
Query: 98 RPSSNIAVRR--VSGTTPTCSGVGIGREMSGRIFNVTVNHLDV 138
P+ + + V G +GV IG E SG I ++ V+HL V
Sbjct: 251 LPTERVRITDNVVRG---GAAGVTIGSETSGGIRHIEVDHLTV 290
>gi|346223719|ref|ZP_08844861.1| glycoside hydrolase family protein [Anaerophaga thermohalophila DSM
12881]
Length = 567
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 28 LIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC---------YIES 78
+++ TF NSP+ IHP+ N ++ +T+ +P + N DGLD + +
Sbjct: 247 VLLDGPTFQNSPAWNIHPLMSENVIIRNLTIRNPWYSQNGDGLDLESCKNVLIYNNSFDV 306
Query: 79 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV 133
G+ + KSG + DG P+ N+ V+ + G +G EMSG + NV V
Sbjct: 307 GDDAICFKSGKNEDGRRRGMPTENVIVKN-NIVYHGHGGFVVGSEMSGGVRNVHV 360
>gi|354581296|ref|ZP_09000200.1| glycoside hydrolase family 28 [Paenibacillus lactis 154]
gi|353201624|gb|EHB67077.1| glycoside hydrolase family 28 [Paenibacillus lactis 154]
Length = 522
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 7 WNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPN 66
+ + R +L+ L N IL+ + TF NS + +HP ++ +TV +P A N
Sbjct: 189 YEPVRDYLRPNLLSLRNCKRILL-NGPTFQNSAAWCLHPWASEQITIQNITVRNPWYAQN 247
Query: 67 TDGLDPDC--YI-------ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSG 117
DGLD D Y+ + G+ + +KSG + G + +PS I++R + G
Sbjct: 248 GDGLDIDSCKYVTVENSSFDVGDDAICLKSGKNEAGRLLGKPSERISIRNCT-VYHGHGG 306
Query: 118 VGIGREMSGRIFNVTVN 134
+ +G EMSG I +V V+
Sbjct: 307 IVVGSEMSGGIKDVHVS 323
>gi|300725841|ref|ZP_07059307.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
gi|299776888|gb|EFI73432.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
Length = 447
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 106/257 (41%), Gaps = 46/257 (17%)
Query: 2 RWDLWW-NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+ D+W +S + R L+ + N+ + +TF NSP+ +HP+ C N + + V +
Sbjct: 165 KGDVWEPDSNAANIRPVLLNFTSCKNVKL-EGVTFKNSPAWCVHPLLCENVTIDNIKVNN 223
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGT 111
P A N D LD + ++G+ + +KSG + G P N+ ++ +
Sbjct: 224 PWYAQNGDALDVESCKNVVIINSLFDAGDDAICIKSGKNEAGRRRGVPCENVYIKN-NTV 282
Query: 112 TPTCSGVGIGREMSGRIFNVTVNH-----LDVWMQQQGS----------YKDR------- 149
G IG EMSG + N+ ++ DV ++ + + Y DR
Sbjct: 283 LHGHGGFVIGSEMSGGVKNIYISDCTFIGTDVGLRFKSARGRGGVVENIYIDRINMKNIV 342
Query: 150 -----LRLY----GHPKEGWD-PKAIPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEIC 199
+ LY G P E D + P I N++ K+ L G+ E I
Sbjct: 343 NEAITMNLYYSSNGKPAERTDVNEGTPVFRNIEMKNLLVEGAGKSFYLYGLPEMPLENIS 402
Query: 200 MKN--VSLLVQAPSVKW 214
++N VS + + S+ +
Sbjct: 403 IQNMRVSKIAETSSINY 419
>gi|427387343|ref|ZP_18883399.1| hypothetical protein HMPREF9447_04432 [Bacteroides oleiciplenus YIT
12058]
gi|425725504|gb|EKU88375.1| hypothetical protein HMPREF9447_04432 [Bacteroides oleiciplenus YIT
12058]
Length = 923
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 12/119 (10%)
Query: 22 MNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD-------- 73
+N +N+ I +T S + P YC N ++G+TV S L P DG+D +
Sbjct: 211 INCTNVFI-EGITMNRSALWNVVPTYCENVIIRGITVNS-LEIPRGDGIDIESSKNVLIE 268
Query: 74 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 131
C + + + +KSG +G+ + RP++N+ +R S T G+ G E +G I N+
Sbjct: 269 YCTLNTHDDCFTLKSGRGEEGVHIGRPTANVVIRH-SLATNGPGGITCGSETAGNIKNI 326
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 13/92 (14%)
Query: 9 STLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS---AP 65
+ + R L+ + NS N+ I S + NSP T H C + + + SP S AP
Sbjct: 666 TNMDELRPRLLYVSNSKNVQI-SGVRLINSPFWTTHFYKCEQLRLLNLHITSPTSPVHAP 724
Query: 66 NTDGLDPD---------CYIESGNGLVAVKSG 88
+TDG+D D CYI + +A+K G
Sbjct: 725 STDGVDIDVCTNVLIKNCYISVDDDGIALKGG 756
>gi|253687385|ref|YP_003016575.1| glycoside hydrolase family protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251753963|gb|ACT12039.1| glycoside hydrolase family 28 [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 402
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 101/214 (47%), Gaps = 39/214 (18%)
Query: 3 WDLWWNSTLKHTRGHLVELM--NSSNILIISNLTFCNSPSRTIHPVYCR-NGFVK-GMTV 58
WDL ++ +K + + L+ N S + N++ NSP+ H V+ +GF T+
Sbjct: 161 WDLAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSPN--FHVVFSDGDGFTAWKTTI 218
Query: 59 LSPLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVS 109
+P +A NTDG+DP I +G+ VA+K+ + G A R NI++ +
Sbjct: 219 KTPSTARNTDGIDPMSSKNITIAHSNISTGDDNVAIKA---YKGRAETR---NISI--LH 270
Query: 110 GTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKIS 169
T G+ IG E G ++NVTV+ L++ G LR+ D A ++
Sbjct: 271 NEFGTGHGMSIGSETMG-VYNVTVDDLNMNGTTNG-----LRIKS------DKSAAGVVN 318
Query: 170 GISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
GI + NVV N K P+ +I T +E+ NV
Sbjct: 319 GIRYSNVVMKNVAK-PI---VIDTVYEKKEGSNV 348
>gi|423226292|ref|ZP_17212758.1| hypothetical protein HMPREF1062_04944 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392629720|gb|EIY23726.1| hypothetical protein HMPREF1062_04944 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 459
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 60/136 (44%), Gaps = 19/136 (13%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD--- 71
R HL+ N+L+ SP TIH C G + + V + N DG+D
Sbjct: 205 RPHLIHFNRCRNVLL-DGFKIRESPFWTIHIYMCNGGIARNLDVKA--HGHNNDGIDLEM 261
Query: 72 ------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGR 122
DC + G+ V +K+G + D + P+ NI +R V G T +GIG
Sbjct: 262 TRNFLVEDCTFDQGDDAVVIKAGRNRDAWRLNIPTENIVIRNCNIVEGHTL----LGIGS 317
Query: 123 EMSGRIFNVTVNHLDV 138
E+SG I NV ++ V
Sbjct: 318 EISGGIRNVYMHDCKV 333
>gi|309779639|ref|ZP_07674398.1| polygalacturonase transmembrane protein [Ralstonia sp. 5_7_47FAA]
gi|349616569|ref|ZP_08895706.1| hypothetical protein HMPREF0989_03952 [Ralstonia sp. 5_2_56FAA]
gi|308921580|gb|EFP67218.1| polygalacturonase transmembrane protein [Ralstonia sp. 5_7_47FAA]
gi|348612214|gb|EGY61836.1| hypothetical protein HMPREF0989_03952 [Ralstonia sp. 5_2_56FAA]
Length = 671
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 21/141 (14%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R +VE + +N+L+ N N+P HPV+C N ++G+TV S PN DG DP
Sbjct: 339 YLRPCMVEFIGCTNVLM-ENYRTVNTPFWQHHPVHCTNVVIRGVTVDS--IGPNNDGFDP 395
Query: 73 DC---------YIESGNGLVAVKSGWDHD---GIAMARPSSNIAVRRVSGTTPTCSGVGI 120
D +G+ +A+KSG + D G A N + G G+ +
Sbjct: 396 DACSNVLCENVTFNTGDDCIAIKSGKNLDTGYGPAQDHVIQNCTMNSGHG------GITL 449
Query: 121 GREMSGRIFNVTVNHLDVWMQ 141
G EM G + N+ +L + Q
Sbjct: 450 GSEMGGGVQNIYARNLAMLNQ 470
>gi|407710705|ref|YP_006794569.1| glycoside hydrolase family protein [Burkholderia phenoliruptrix
BR3459a]
gi|407239388|gb|AFT89586.1| glycoside hydrolase family 28 [Burkholderia phenoliruptrix BR3459a]
Length = 637
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 15/139 (10%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R +VE + +N+L+ N N+P HP C+N ++G+T S PN DG DP
Sbjct: 305 YLRPCMVEFIGCTNVLM-ENYCTNNTPFWQHHPTDCKNVVIRGVTTNS--IGPNNDGFDP 361
Query: 73 DC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
D +G+ +A+KSG D D P+ N ++ + + G+ +G E
Sbjct: 362 DACDNVLCDGVTFNTGDDCIAIKSGKDLD--TQYGPAQNHVIQNCTMNSGH-GGITLGSE 418
Query: 124 MSGRIFNVTVNHLDVWMQQ 142
M G + N+ +L + Q
Sbjct: 419 MGGGVQNIYARNLQMLNQN 437
>gi|371778396|ref|ZP_09484718.1| glycoside hydrolase [Anaerophaga sp. HS1]
Length = 572
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 28 LIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC---------YIES 78
+++ TF NSP+ IHP+ C + ++ +TV +P + N DGLD + +
Sbjct: 252 VLLDGPTFQNSPAWNIHPLLCEDVTIRNLTVRNPWYSQNGDGLDLESCKNVVIYNNSFDV 311
Query: 79 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
G+ + KSG D DG A P+ N+ V+ G IG EMSG + NV V++
Sbjct: 312 GDDAICFKSGKDEDGRKRAVPTENVVVKNNV-VYHGHGGFVIGSEMSGGVRNVHVSN 367
>gi|325298060|ref|YP_004257977.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324317613|gb|ADY35504.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 462
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 61/132 (46%), Gaps = 14/132 (10%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R L++ NI + + NSP IH + N +G+ + L N DG+DP
Sbjct: 198 YLRPQLIQFFACKNI-TLEGVFITNSPFWCIHLLKSENIICRGLRYDAKLV--NNDGIDP 254
Query: 73 DCY-------IESGNGL--VAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+ IE NG VA+K G D+DG ARPS NI +R GV +G E
Sbjct: 255 EFTRNLLIENIEFNNGDDNVAIKCGRDNDGWTTARPSENIIIRNCK--FKGLHGVVLGSE 312
Query: 124 MSGRIFNVTVNH 135
MS + NV + +
Sbjct: 313 MSAGVQNVFIEN 324
>gi|323529874|ref|YP_004232026.1| glycoside hydrolase family 28 [Burkholderia sp. CCGE1001]
gi|323386876|gb|ADX58966.1| glycoside hydrolase family 28 [Burkholderia sp. CCGE1001]
Length = 667
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 15/138 (10%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R +VE + +N+L+ N N+P HP C+N ++G+T S PN DG DP
Sbjct: 335 YLRPCMVEFIGCTNVLM-ENYCTNNTPFWQHHPTDCKNVVIRGVTTNS--IGPNNDGFDP 391
Query: 73 DC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
D +G+ +A+KSG D D P+ N ++ + + G+ +G E
Sbjct: 392 DACDNVLCDGVTFNTGDDCIAIKSGKDLD--TQYGPAQNHVIQNCTMNSGH-GGITLGSE 448
Query: 124 MSGRIFNVTVNHLDVWMQ 141
M G + N+ +L + Q
Sbjct: 449 MGGGVQNIYARNLQMLNQ 466
>gi|332715898|ref|YP_004443364.1| polygalacturonase-like protein [Agrobacterium sp. H13-3]
gi|325062583|gb|ADY66273.1| polygalacturonase-like protein [Agrobacterium sp. H13-3]
Length = 531
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 33/162 (20%)
Query: 6 WWN------STLKHTRG-HLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTV 58
WW+ + RG HLV N + + T N+PS T+HP C G+T+
Sbjct: 220 WWSWPKETRDGARRPRGLHLVSCRN----VGLFGFTIRNAPSWTVHPQGCETLKAAGLTI 275
Query: 59 LSPLSAPNTDGLDPD---------CYIESGNGLVAVKSG-----WDHDGIAMARPSS--N 102
+P ++PNTDG +P+ G+ +AVK+G + D +A R S +
Sbjct: 276 SAPHNSPNTDGFNPESCRNVTISGVRFSVGDDCIAVKAGKRGPNGEDDHLAETRGVSVRH 335
Query: 103 IAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG 144
+ R G G+ IG EMSG + +VTV D+ +G
Sbjct: 336 CLMERGHG------GLVIGSEMSGGVHDVTVEDCDMVGTDRG 371
>gi|224536009|ref|ZP_03676548.1| hypothetical protein BACCELL_00873 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522376|gb|EEF91481.1| hypothetical protein BACCELL_00873 [Bacteroides cellulosilyticus
DSM 14838]
Length = 459
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 60/136 (44%), Gaps = 19/136 (13%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD--- 71
R HL+ N+L+ SP TIH C G + + V + N DG+D
Sbjct: 205 RPHLIHFNRCRNVLL-DGFKIRESPFWTIHIYMCDGGIARNLDVKA--HGHNNDGIDLEM 261
Query: 72 ------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGR 122
DC + G+ V +K+G + D + P+ NI +R V G T +GIG
Sbjct: 262 TRNFLVEDCTFDQGDDAVVIKAGRNRDAWRLNIPTENIVIRNCNIVEGHTL----LGIGS 317
Query: 123 EMSGRIFNVTVNHLDV 138
E+SG I NV ++ V
Sbjct: 318 EISGGIRNVYMHDCKV 333
>gi|407688605|ref|YP_006803778.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291985|gb|AFT96297.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 476
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 14/128 (10%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD- 71
+ R L++ ++ +L+ + T NSP H VY + V+ + V S L N DGLD
Sbjct: 215 YLRPPLIQFFHAKRVLL-EDYTALNSPFWVNHLVYTSHATVRRVKVESHLY--NNDGLDI 271
Query: 72 --------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
D + +G+ + +KSG D DG + PS++I R + G+G+G E
Sbjct: 272 ESSQFVLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVAR--NNDLGGEDGIGLGSE 329
Query: 124 MSGRIFNV 131
MSG I V
Sbjct: 330 MSGGIKRV 337
>gi|161519770|ref|YP_001583197.1| glycoside hydrolase family protein [Burkholderia multivorans ATCC
17616]
gi|189354051|ref|YP_001949678.1| endopolygalacturonase [Burkholderia multivorans ATCC 17616]
gi|160343820|gb|ABX16905.1| glycoside hydrolase family 28 [Burkholderia multivorans ATCC 17616]
gi|189338073|dbj|BAG47142.1| endopolygalacturonase [Burkholderia multivorans ATCC 17616]
Length = 665
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 15/135 (11%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R +VE + +N+L+ N N+P HP CRN ++G+T S PN DG DP
Sbjct: 333 YLRPCMVEFIGCTNVLM-ENYQTQNTPFWQHHPTACRNVVIRGVTTNS--IGPNNDGFDP 389
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
D C +G+ +A+KSG + D P+ VR + + G+ +G E
Sbjct: 390 DACTDVLCEDCTFNTGDDCIAIKSGKNRD--TEYGPAKRHLVRNCTMNS-GHGGITLGSE 446
Query: 124 MSGRIFNVTVNHLDV 138
M G + + +L +
Sbjct: 447 MGGGVEQIYATNLSM 461
>gi|407684685|ref|YP_006799859.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'English Channel 673']
gi|407246296|gb|AFT75482.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'English Channel 673']
Length = 476
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 14/128 (10%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD- 71
+ R L++ ++ +L+ + T NSP H VY + V+ + V S L N DGLD
Sbjct: 215 YLRPPLIQFFHAKRVLL-EDYTALNSPFWVNHLVYTSHATVRRVKVESHLY--NNDGLDI 271
Query: 72 --------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
D + +G+ + +KSG D DG + PS++I R + G+G+G E
Sbjct: 272 ESSQFVLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVAR--NNDLGGEDGIGLGSE 329
Query: 124 MSGRIFNV 131
MSG I V
Sbjct: 330 MSGGIKRV 337
>gi|15891800|ref|NP_357472.1| polygalacturonase-like protein [Agrobacterium fabrum str. C58]
gi|15160276|gb|AAK90257.1| polygalacturonase-like protein [Agrobacterium fabrum str. C58]
Length = 517
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 18/126 (14%)
Query: 33 LTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYIESGNGLV 83
T N+ S TIHP C + G+T+++P +PNTDG +P+ G+ +
Sbjct: 243 FTIRNAASWTIHPQGCEDLTAAGLTIIAPHDSPNTDGFNPESCRNVMISGVRFSVGDDCI 302
Query: 84 AVKSG-----WDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNHLDV 138
AVK+G + D +A R I+VR G+ IG EMSG + +VTV D+
Sbjct: 303 AVKAGKRGPDGEDDHLAETR---GISVRHCL-MQRGHGGLVIGSEMSGGVHDVTVEDCDM 358
Query: 139 WMQQQG 144
+G
Sbjct: 359 IGTDRG 364
>gi|421478826|ref|ZP_15926555.1| polygalacturonase domain protein [Burkholderia multivorans CF2]
gi|400223986|gb|EJO54252.1| polygalacturonase domain protein [Burkholderia multivorans CF2]
Length = 665
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 15/135 (11%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R +VE + +N+L+ N N+P HP CRN ++G+T S PN DG DP
Sbjct: 333 YLRPCMVEFIGCTNVLM-ENYQTQNTPFWQHHPTACRNVVIRGVTTNS--IGPNNDGFDP 389
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
D C +G+ +A+KSG + D P+ VR + + G+ +G E
Sbjct: 390 DACTDVLCEDCTFNTGDDCIAIKSGKNRD--TEYGPAKRHLVRNCTMNS-GHGGITLGSE 446
Query: 124 MSGRIFNVTVNHLDV 138
M G + + +L +
Sbjct: 447 MGGGVEQIYATNLSM 461
>gi|388258052|ref|ZP_10135230.1| glycoside hydrolase family 28 [Cellvibrio sp. BR]
gi|387938173|gb|EIK44726.1| glycoside hydrolase family 28 [Cellvibrio sp. BR]
Length = 513
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 12/145 (8%)
Query: 5 LWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL--SPL 62
L W + R L+++ NS I + L + T+ VY + V + + S
Sbjct: 206 LRWAADYDAERPRLIQVYNSKRIELGGGLHMKRAGFWTLQIVYSNDVKVSNVVIRNNSDG 265
Query: 63 SAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
P+TDG+D D I+ + + +K+G D DG+ + RP+ ++ +R S
Sbjct: 266 KGPSTDGIDIDSSHHVLVEKADIDVNDDALCLKAGRDADGLRVNRPTEHVVIRD-SIIRH 324
Query: 114 TCSGVGIGREMSGRIFNVTVNHLDV 138
+GV G E SG I N+ V +LDV
Sbjct: 325 AEAGVTFGSETSGSIRNIDVYNLDV 349
>gi|399032135|ref|ZP_10731774.1| endopolygalacturonase [Flavobacterium sp. CF136]
gi|398069546|gb|EJL60896.1| endopolygalacturonase [Flavobacterium sp. CF136]
Length = 449
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 15/131 (11%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP-- 72
R +++ NIL+ N+ NSP +H + + V+G++ S N DG+DP
Sbjct: 196 RPQMIQFFKCKNILV-ENIRIENSPFWCLHLLKSESITVRGISYKSL--NYNNDGIDPEY 252
Query: 73 --DCYIES-----GNGLVAVKSGWDHDGIA-MARPSSNIAVRRVSGTTPTCSGVGIGREM 124
D IE+ G+ +A+K+G DH+G A A PS NI +R + GV IG EM
Sbjct: 253 AKDVLIENVTFNNGDDNIAIKAGRDHEGRANSATPSENIIIRNCN--FKGLHGVVIGSEM 310
Query: 125 SGRIFNVTVNH 135
S + NV V +
Sbjct: 311 SAGVQNVYVEN 321
>gi|423241439|ref|ZP_17222552.1| hypothetical protein HMPREF1065_03175 [Bacteroides dorei
CL03T12C01]
gi|392641332|gb|EIY35109.1| hypothetical protein HMPREF1065_03175 [Bacteroides dorei
CL03T12C01]
Length = 470
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 14/139 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R H++ L+N +I ++T NS TIH + C + + G+++L+ L N DG+D D
Sbjct: 160 RPHVLTLINVEKT-VIRDITIRNSAYWTIHLIGCYDALIDGISLLNNLKIRNGDGIDVDH 218
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C+IESG+ + +K+ + + +I V T+ +C+ + IG E
Sbjct: 219 SKKVRIANCFIESGDDCICLKNRREFEEYG---SCEDIVVTNCVMTSRSCA-IKIGSENM 274
Query: 126 GRIFNVTVNHLDVWMQQQG 144
+I NV N+ + +G
Sbjct: 275 DKIENVLFNNCIIKNSNRG 293
>gi|227113343|ref|ZP_03826999.1| endo-polygalacturonase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 402
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 39/214 (18%)
Query: 3 WDLWWNSTLKHTRGHLVELM--NSSNILIISNLTFCNSPSRTIHPVYCR-NGFVK-GMTV 58
WDL ++ +K + + L+ N S + N++ NSP+ H V+ +GF T+
Sbjct: 161 WDLAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSPN--FHVVFSDGDGFTAWKTTI 218
Query: 59 LSPLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVS 109
+P +A NTDG+DP I +G+ VA+K+ + G A R NI++ +
Sbjct: 219 KTPSTARNTDGIDPMSSKNITIAHSSISTGDDNVAIKA---YKGRAETR---NISI--LH 270
Query: 110 GTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKIS 169
T G+ IG E G ++NVTV+ L++ G LR+ D A ++
Sbjct: 271 NEFGTGHGMSIGSETMG-VYNVTVDDLNMNGTTNG-----LRIKS------DKSAAGVVN 318
Query: 170 GISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
G+ + NVV N K P+ +I T +E+ NV
Sbjct: 319 GVRYSNVVMKNVAK-PI---VIDTVYEKKEGSNV 348
>gi|407700954|ref|YP_006825741.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Black Sea 11']
gi|407250101|gb|AFT79286.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii str.
'Black Sea 11']
Length = 476
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 15/144 (10%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD- 71
+ R L++ ++ +L+ + T NSP H VY + V+ + V S L N DGLD
Sbjct: 215 YLRPPLIQFFHAKRVLL-EDYTALNSPFWVNHLVYTSHATVRRVKVESHLY--NNDGLDI 271
Query: 72 --------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
D + +G+ + +KSG D DG + PS++I R + G+G+G E
Sbjct: 272 ESSQFVLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVAR--NNDLGGEDGIGLGSE 329
Query: 124 MSGRIFNVTVNHLDVWMQQQGSYK 147
MSG I V + +V + +Y+
Sbjct: 330 MSGGIKRVFFEN-NVLQEGDSAYR 352
>gi|300728596|ref|ZP_07061954.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
gi|299774165|gb|EFI70799.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
Length = 453
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 59/130 (45%), Gaps = 14/130 (10%)
Query: 22 MNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD-------- 73
+NS N+L+ +T S I PVYC N ++ +TV S TDG+D D
Sbjct: 211 VNSRNVLL-EGVTLERSVFWNIVPVYCENIIIRDVTVNS-FGHARTDGIDFDSSRNGLVE 268
Query: 74 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 132
++ G+ +KSG DG+ RP+ NI +R G IG E + I NV
Sbjct: 269 YTTLDCGDDCFTLKSGRGMDGVKRNRPTENIVIRHCK-VVNAAGGFTIGSETAAMIRNVY 327
Query: 133 VNHLDVWMQQ 142
V D+ M+
Sbjct: 328 V--YDIEMEH 335
>gi|424890185|ref|ZP_18313784.1| endopolygalacturonase [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393172403|gb|EJC72448.1| endopolygalacturonase [Rhizobium leguminosarum bv. trifolii
WSM2012]
Length = 454
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 59/118 (50%), Gaps = 11/118 (9%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDG--LDP-------DCYIESGN 80
I +LT SP T+H V C N V+ +T+ + PNTDG LD DC I + +
Sbjct: 143 IGSLTISGSPMWTLHFVDCTNVAVRNVTIENDRRLPNTDGIVLDACRGAFIEDCTISTAD 202
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNHLDV 138
+ +K+ +G+A+ R NI VRR S + +C+ + IG E G I NV V
Sbjct: 203 DGICLKTSIGPEGVAIGR-CENILVRRCSVQSLSCA-LKIGTETHGDITNVLFEDCSV 258
>gi|335034438|ref|ZP_08527786.1| polygalacturonase-like protein [Agrobacterium sp. ATCC 31749]
gi|333794034|gb|EGL65383.1| polygalacturonase-like protein [Agrobacterium sp. ATCC 31749]
Length = 517
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 71/160 (44%), Gaps = 29/160 (18%)
Query: 6 WWN------STLKHTRG-HLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTV 58
WW+ + RG HLV + + T N+ S TIHP C + G+T+
Sbjct: 213 WWSWPKETRDGARRPRGLHLVSCRKTQ----LLGFTIRNAASWTIHPQGCEDLTAAGLTI 268
Query: 59 LSPLSAPNTDGLDPD---------CYIESGNGLVAVKSG-----WDHDGIAMARPSSNIA 104
++P +PNTDG +P+ G+ +AVK+G + D +A R I+
Sbjct: 269 IAPHDSPNTDGFNPESCRNVMISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETR---GIS 325
Query: 105 VRRVSGTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG 144
VR G+ IG EMSG + +VTV D+ +G
Sbjct: 326 VRHCL-MQRGHGGLVIGSEMSGGVHDVTVEDCDMIGTDRG 364
>gi|221200600|ref|ZP_03573641.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2M]
gi|221208427|ref|ZP_03581429.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2]
gi|221171615|gb|EEE04060.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2]
gi|221179172|gb|EEE11578.1| glycoside hydrolase, family 28 [Burkholderia multivorans CGD2M]
Length = 665
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 15/135 (11%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R +VE + +N+L+ N N+P HP CRN ++G+T S PN DG DP
Sbjct: 333 YLRPCMVEFIGCTNVLM-ENYQTQNTPFWQHHPTACRNVVIRGVTTNS--IGPNNDGFDP 389
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
D C +G+ +A+KSG + D P+ VR + + G+ +G E
Sbjct: 390 DACTDVLCEDCTFNTGDDCIAIKSGKNRD--TEYGPAKRHLVRNCTMNS-GHGGITLGSE 446
Query: 124 MSGRIFNVTVNHLDV 138
M G + + +L +
Sbjct: 447 MGGGVEQIYATNLSM 461
>gi|265753058|ref|ZP_06088627.1| glycoside hydrolase, family 28 [Bacteroides sp. 3_1_33FAA]
gi|345513915|ref|ZP_08793430.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|423230932|ref|ZP_17217336.1| hypothetical protein HMPREF1063_03156 [Bacteroides dorei
CL02T00C15]
gi|423244643|ref|ZP_17225718.1| hypothetical protein HMPREF1064_01924 [Bacteroides dorei
CL02T12C06]
gi|263236244|gb|EEZ21739.1| glycoside hydrolase, family 28 [Bacteroides sp. 3_1_33FAA]
gi|345456135|gb|EEO45804.2| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|392630052|gb|EIY24054.1| hypothetical protein HMPREF1063_03156 [Bacteroides dorei
CL02T00C15]
gi|392641492|gb|EIY35268.1| hypothetical protein HMPREF1064_01924 [Bacteroides dorei
CL02T12C06]
Length = 470
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 14/139 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R H++ L+N +I ++T NS TIH + C + + G+++L+ L N DG+D D
Sbjct: 160 RPHVLTLINVEKT-VIRDITIRNSAYWTIHLIGCYDALIDGISLLNNLKIRNGDGIDVDH 218
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C+IESG+ + +K+ + + +I V T+ +C+ + IG E
Sbjct: 219 SKKVRIANCFIESGDDCICLKNRREFEEYG---SCEDIVVTNCVMTSRSCA-IKIGSENM 274
Query: 126 GRIFNVTVNHLDVWMQQQG 144
+I NV N+ + +G
Sbjct: 275 DKIDNVLFNNCIIKNSNRG 293
>gi|406597664|ref|YP_006748794.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii ATCC
27126]
gi|406374985|gb|AFS38240.1| exo-poly-alpha-D-galacturonosidase [Alteromonas macleodii ATCC
27126]
Length = 476
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 14/128 (10%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD- 71
+ R L++ ++ +L+ + T NSP H VY + V+ + V S L N DGLD
Sbjct: 215 YLRPPLIQFFHAKRVLL-EDYTALNSPFWVNHLVYTSHATVRRVKVESHLY--NNDGLDI 271
Query: 72 --------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
D + +G+ + +KSG D DG + PS++I R + G+G+G E
Sbjct: 272 ESSQFVLAEDNHFRTGDDGIVIKSGRDADGRNIGIPSTDIVAR--NNDLGGEDGIGLGSE 329
Query: 124 MSGRIFNV 131
MSG I V
Sbjct: 330 MSGGIKRV 337
>gi|237711639|ref|ZP_04542120.1| glycoside hydrolase [Bacteroides sp. 9_1_42FAA]
gi|229454334|gb|EEO60055.1| glycoside hydrolase [Bacteroides sp. 9_1_42FAA]
Length = 457
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 14/139 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R H++ L+N +I ++T NS TIH + C + + G+++L+ L N DG+D D
Sbjct: 147 RPHVLTLINVEKT-VIRDITIRNSAYWTIHLIGCYDALIDGISLLNNLKIRNGDGIDVDH 205
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C+IESG+ + +K+ + + +I V T+ +C+ + IG E
Sbjct: 206 SKKVRIANCFIESGDDCICLKNRREFEEYG---SCEDIVVTNCVMTSRSCA-IKIGSENM 261
Query: 126 GRIFNVTVNHLDVWMQQQG 144
+I NV N+ + +G
Sbjct: 262 DKIENVLFNNCIIKNSNRG 280
>gi|295103112|emb|CBL00656.1| Endopolygalacturonase [Faecalibacterium prausnitzii SL3/3]
Length = 518
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 25/196 (12%)
Query: 4 DLWWNSTLKHT--RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
D W N +K R V ++S N+ + +T NS S TIHP++ ++ + + +P
Sbjct: 208 DWWVNPKVKRIAWRPRAVAAVDSENV-CLHGITVQNSFSWTIHPIFVKHLDLLNFNINNP 266
Query: 62 LSAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
+APNTDG+DP+ I G+ +A+K+ G+ + R + +R
Sbjct: 267 YNAPNTDGIDPESCEYIRIIGMNIHVGDDCIAMKASKVFLGMKLKRSCEHTVIRNCL-LD 325
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDR-LRLYGHPKEGWDPKAIPKISGI 171
G+ IG EMSG + ++ V Q + DR LR+ + G A+ I G+
Sbjct: 326 KGHGGIVIGSEMSGGVKDMVVT------QCLMDHTDRGLRV--KTRRGRGNTAV--IDGL 375
Query: 172 SFVNVVSVNTTKAPVL 187
F N V + KAP +
Sbjct: 376 VFRN-VEMRGVKAPFV 390
>gi|251790610|ref|YP_003005331.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
gi|247539231|gb|ACT07852.1| glycoside hydrolase family 28 [Dickeya zeae Ech1591]
Length = 467
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 65/146 (44%), Gaps = 16/146 (10%)
Query: 2 RWDLWWNSTLKH---TRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTV 58
RW +T K R L+ + SS +L+ +T NSPS + Y R+ V G ++
Sbjct: 161 RWREAIRATGKKGGTDRPRLIYITRSSQVLV-DGVTLTNSPSFHVVMRYARDVTVNGTSI 219
Query: 59 LSPLSAPNTDGLDPDCYIESGNGLVA---VKSGWDHDGIAMARPSSNIA------VRRVS 109
++P APNTD +DP I+S N + + DH I +P S V +
Sbjct: 220 IAPWHAPNTDAIDP---IDSQNIRITNNVIDCNDDHIAIKAEKPDSRFPDGVVDNVYIAN 276
Query: 110 GTTPTCSGVGIGREMSGRIFNVTVNH 135
G+ IG E SG + NV V +
Sbjct: 277 NVLKQGRGISIGSETSGGVNNVLVEN 302
>gi|160945608|ref|ZP_02092834.1| hypothetical protein FAEPRAM212_03137 [Faecalibacterium prausnitzii
M21/2]
gi|158443339|gb|EDP20344.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii M21/2]
Length = 518
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 25/196 (12%)
Query: 4 DLWWNSTLKHT--RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
D W N +K R V ++S N+ + +T NS S TIHP++ ++ + + +P
Sbjct: 208 DWWVNPKVKRIAWRPRAVAAVDSENV-CLHGITVQNSYSWTIHPIFVKHLDLLNFNINNP 266
Query: 62 LSAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
+APNTDG+DP+ I G+ +A+K+ G+ + R + +R
Sbjct: 267 YNAPNTDGIDPESCEYIRIIGMNIHVGDDCIAMKASKVFLGMKLKRSCEHTVIRNCL-LD 325
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDR-LRLYGHPKEGWDPKAIPKISGI 171
G+ IG EMSG + ++ V Q + DR LR+ + G A+ I G+
Sbjct: 326 KGHGGIVIGSEMSGGVKDMVVT------QCLMDHTDRGLRV--KTRRGRGNTAV--IDGL 375
Query: 172 SFVNVVSVNTTKAPVL 187
F N V + KAP +
Sbjct: 376 VFRN-VEMRGVKAPFV 390
>gi|197105923|ref|YP_002131300.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
gi|196479343|gb|ACG78871.1| exo-poly-alpha-D-galacturonosidase [Phenylobacterium zucineum HLK1]
Length = 468
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 59/128 (46%), Gaps = 14/128 (10%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD- 71
H R L+++ + + T NSP H VY V+G+TV S PN DG+D
Sbjct: 208 HLRPPLIQVFGGKRVRL-EGFTARNSPFWVNHLVYADEVVVRGITVDSHF--PNNDGVDV 264
Query: 72 --------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+ +G+ V +KSG D DG + RPS+ + VR G+ +G E
Sbjct: 265 ESSTRVLIENSRFRTGDDSVVIKSGRDLDGRRIGRPSAWVLVR--GNDMGGEDGIALGSE 322
Query: 124 MSGRIFNV 131
MSG + +V
Sbjct: 323 MSGGVHDV 330
>gi|197210953|gb|ACH48398.1| polygalacturonase [Pectobacterium carotovorum]
Length = 402
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 39/214 (18%)
Query: 3 WDLWWNSTLKHTRGHLVELM--NSSNILIISNLTFCNSPSRTIHPVYCR-NGFVK-GMTV 58
WDL ++ +K + + L+ N S + N++ NSP+ H V+ +GF T+
Sbjct: 161 WDLAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSPN--FHVVFSDGDGFTAWKTTI 218
Query: 59 LSPLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVS 109
+P +A NTDG+DP I +G+ VA+K+ + G A R NI++ +
Sbjct: 219 KTPSTARNTDGIDPMSSKNITIAHSSISTGDDNVAIKA---YKGRAETR---NISI--LH 270
Query: 110 GTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKIS 169
T G IG E G ++NVTV+ L++ G LR+ D A ++
Sbjct: 271 NEFGTGHGTSIGSETMG-VYNVTVDDLNMNGTTNG-----LRIKS------DKSAAGVVN 318
Query: 170 GISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
G+ + NVV N K P+ +I T +E+ NV
Sbjct: 319 GVRYSNVVMKNVAK-PI---VIDTVYEKKEGSNV 348
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 119 GIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISFVNVVS 178
G +++ R F + WM GSYK HP G+DPKA+P+IS I + ++ +
Sbjct: 974 GYIKDIFARRFTMKTMKYVFWMT--GSYK------LHPVGGFDPKALPEISNIHYRDMTA 1025
Query: 179 VNTTKAPVLAGIIGTQFEEICMKNVSLLV--QAPSVKWQCRFVSG 221
N T + L I F +CM +V++ + ++W C VSG
Sbjct: 1026 ENVTISAKLERIKNGPFTGLCMSSVTIALSPDPKKLQWNCTDVSG 1070
>gi|421472155|ref|ZP_15920382.1| polygalacturonase domain protein, partial [Burkholderia multivorans
ATCC BAA-247]
gi|400223840|gb|EJO54116.1| polygalacturonase domain protein, partial [Burkholderia multivorans
ATCC BAA-247]
Length = 615
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 15/135 (11%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R +VE + +N+L+ N N+P HP CRN ++G+T S PN DG DP
Sbjct: 283 YLRPCMVEFIGCTNVLM-ENYQTQNTPFWQHHPTACRNVVIRGVTTNS--IGPNNDGFDP 339
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
D C +G+ +A+KSG + D P+ VR + + G+ +G E
Sbjct: 340 DACTDVLCEDCTFNTGDDCIAIKSGKNRD--TEYGPAKRHLVRNCTMNS-GHGGITLGSE 396
Query: 124 MSGRIFNVTVNHLDV 138
M G + + +L +
Sbjct: 397 MGGGVEQIYATNLSM 411
>gi|423312679|ref|ZP_17290616.1| hypothetical protein HMPREF1058_01228 [Bacteroides vulgatus
CL09T03C04]
gi|392687413|gb|EIY80706.1| hypothetical protein HMPREF1058_01228 [Bacteroides vulgatus
CL09T03C04]
Length = 594
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 12/129 (9%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R + +N +NILI +T S + P+YC N ++G+TV S P+ DG+D +
Sbjct: 274 RPKTISPINCTNILI-EGITMERSTLWNVVPIYCENVIIRGITVNS-TKVPSGDGIDIES 331
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C + G+ +K+G DG+ + +P+ N+ + R S G+ G E +
Sbjct: 332 CKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVI-RYSLAQHGHGGITCGSETA 390
Query: 126 GRIFNVTVN 134
G I N+ V+
Sbjct: 391 GVIKNLYVH 399
>gi|375148498|ref|YP_005010939.1| glycoside hydrolase family protein [Niastella koreensis GR20-10]
gi|361062544|gb|AEW01536.1| glycoside hydrolase family 28 [Niastella koreensis GR20-10]
Length = 547
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 11/139 (7%)
Query: 6 WWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAP 65
++ S R +L+ L +L+ +TF NS + +HP+ + V+ +TV +P A
Sbjct: 207 FYKSIKDFLRPNLIVLTKCKKVLL-EGVTFQNSAAWCLHPLMSEDLTVRNVTVKNPWFAQ 265
Query: 66 NTDGLD---------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCS 116
N DG+D + + G+ + +KSG D G P+ N+ +R
Sbjct: 266 NGDGIDVESCNRVLIENSSFDVGDDGLCMKSGRDEAGRKRGMPTENVIIRDCK-VYHAHG 324
Query: 117 GVGIGREMSGRIFNVTVNH 135
G IG EMSG N+ VN+
Sbjct: 325 GFVIGSEMSGGARNIWVNN 343
>gi|423232692|ref|ZP_17219092.1| hypothetical protein HMPREF1063_04912 [Bacteroides dorei
CL02T00C15]
gi|423247384|ref|ZP_17228434.1| hypothetical protein HMPREF1064_04640 [Bacteroides dorei
CL02T12C06]
gi|392623131|gb|EIY17236.1| hypothetical protein HMPREF1063_04912 [Bacteroides dorei
CL02T00C15]
gi|392632524|gb|EIY26483.1| hypothetical protein HMPREF1064_04640 [Bacteroides dorei
CL02T12C06]
Length = 919
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 12/129 (9%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R + +N +N+LI +T S + P+YC N ++G+TV S P+ DG+D +
Sbjct: 599 RPKTISPINCTNVLI-EGITMERSTLWNVVPIYCENVIIRGITVNS-TKVPSGDGIDIES 656
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C + G+ +K+G DG+ + +P+ N+ + R S G+ G E +
Sbjct: 657 CKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVI-RYSLAQHGHGGITCGSETA 715
Query: 126 GRIFNVTVN 134
G I N+ V+
Sbjct: 716 GVIKNLYVH 724
>gi|325105433|ref|YP_004275087.1| glycoside hydrolase family protein [Pedobacter saltans DSM 12145]
gi|324974281|gb|ADY53265.1| glycoside hydrolase family 28 [Pedobacter saltans DSM 12145]
Length = 569
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 11/128 (8%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD--- 71
R +L + NS IL+ +TF NSP+ +HP+ + ++ + V +P A N DG+D
Sbjct: 238 RPNLFVIANSKRILL-EGVTFQNSPAWCLHPLMSEDLVLRNVFVKNPWYAQNGDGIDIES 296
Query: 72 ------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
+ + G+ + +KSG D G A P+ ++ VR + G IG EMS
Sbjct: 297 CKNVLIENSTFDVGDDGICIKSGRDEAGRKRAMPTEDVIVRN-NVVYHAHGGFVIGSEMS 355
Query: 126 GRIFNVTV 133
G N+ V
Sbjct: 356 GGAKNLYV 363
>gi|189464040|ref|ZP_03012825.1| hypothetical protein BACINT_00375 [Bacteroides intestinalis DSM
17393]
gi|189438613|gb|EDV07598.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 532
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 25/154 (16%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+RW + ++ K RG LVE NSS++ +SN T + +Y + V G+ + +
Sbjct: 213 LRWIVDYD--CKRVRGILVE--NSSDV-TLSNFTLMRTGFWGCQILYSDHCTVDGLIINN 267
Query: 61 PLSA--PNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVS 109
+ P+TDG+D D C I+ + + +K+G D DG+ + RP+ NI +R +
Sbjct: 268 NIGGRGPSTDGIDIDSSTNILIENCEIDCNDDNICLKAGRDADGLRVNRPTENIVIRNCT 327
Query: 110 ----GTTPTCSGVGIGREMSGRIFNVTVNHLDVW 139
G TC G E SG I NV + L +
Sbjct: 328 VHKGGGLITC-----GSETSGGIRNVLAHDLKAF 356
>gi|225874241|ref|YP_002755700.1| polygalacturonase [Acidobacterium capsulatum ATCC 51196]
gi|225791499|gb|ACO31589.1| polygalacturonase [Acidobacterium capsulatum ATCC 51196]
Length = 428
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 105/260 (40%), Gaps = 66/260 (25%)
Query: 6 WWNSTLKH----------TRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKG 55
WW +H TR L+ + N +++ +T NSP I P Y + ++
Sbjct: 142 WWKMAREHKDTGVMGSQYTRPRLI-VFNHCKHVVLEGVTVENSPMWQIVPYYSDDVIIRN 200
Query: 56 MTVLSPLSAPNTDGLDP----DCYIES-----GNGLVAVKSGWDHDGIAMARPSSNIAVR 106
+ VL+P APNTD +DP IE G+ +A+KSG + + PS+ I +R
Sbjct: 201 IHVLAPQHAPNTDAIDPFSSSHVLIEHVVANVGDDDIAIKSG-EANSPGPDAPSTYITIR 259
Query: 107 RVSGTTPTC-----SGVGIGREMSG---RIF--NVTVNHLDVWMQ--------------- 141
C G+ +G E++G I N+T+ D ++
Sbjct: 260 -------DCIFLHGHGLSVGSEIAGGAQHILAENITMTGTDNGIRVKANRDRGNDVSDLV 312
Query: 142 ----QQGSYKDRL---RLYGH--PKEGWDPKAI----PKISGISFVNVVSVNTTKAPVLA 188
Q + K+ L Y H P +P I P I+ NV + N+ A +A
Sbjct: 313 FKNIQMTNVKNALIISEFYPHIYPPMPDNPAPITRLTPHFHNITVENVTATNSKNAGAIA 372
Query: 189 GIIGTQFEEICMKNVSLLVQ 208
G+ ++ +KNVS+ Q
Sbjct: 373 GLPEAPIRDVVLKNVSIDAQ 392
>gi|29120614|gb|AAO62945.1| putative polygalacturonase-like protein [Lactuca sativa]
gi|29120914|gb|AAO62946.1| putative polygalacturonase-like protein [Lactuca sativa]
Length = 50
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 3 WDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCR 49
W++W TL+ TR +LVE +S +I IISN+ F NSP IHPVYCR
Sbjct: 3 WNMWRQRTLQFTRPNLVEFKDSRSI-IISNVIFKNSPFWNIHPVYCR 48
>gi|257440293|ref|ZP_05616048.1| polygalacturonase [Faecalibacterium prausnitzii A2-165]
gi|257197327|gb|EEU95611.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii A2-165]
Length = 518
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 13/143 (9%)
Query: 4 DLWWNSTLKHT--RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
D W N +K R V ++S N+ + +T NS S TIHP++ ++ + + +P
Sbjct: 208 DWWINQKVKRIAWRPRAVAAVDSENV-CLHGITVQNSYSWTIHPIFVKHLDLLNFNINNP 266
Query: 62 LSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
+APNTDG+DP+ I G+ +A+K+ G+ + + + +R
Sbjct: 267 YNAPNTDGIDPESCEYIRIIGANIHVGDDCIAMKASKVFLGMKLKKSCEHTVIRNCL-LD 325
Query: 113 PTCSGVGIGREMSGRIFNVTVNH 135
G+ IG EMSG + ++ V
Sbjct: 326 KGHGGIVIGSEMSGGVKDMVVTQ 348
>gi|427384664|ref|ZP_18881169.1| hypothetical protein HMPREF9447_02202 [Bacteroides oleiciplenus YIT
12058]
gi|425727925|gb|EKU90784.1| hypothetical protein HMPREF9447_02202 [Bacteroides oleiciplenus YIT
12058]
Length = 545
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 12/119 (10%)
Query: 22 MNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD-------- 73
+N +N+ I +T S + P YC N ++G+TV S L P DG+D +
Sbjct: 228 INCTNVFI-EGITMNRSAIWNVVPTYCENVIIRGITVNS-LGIPRGDGIDVESSKNVLIE 285
Query: 74 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 131
C + G+ +KSG +G+ + RP+ N+ + R S G+ G E +G I N+
Sbjct: 286 YCTLNCGDDCFTLKSGRGEEGVRIGRPTENVVI-RYSLAQQGHGGITCGSETAGNIKNI 343
>gi|319640290|ref|ZP_07995015.1| hypothetical protein HMPREF9011_00612 [Bacteroides sp. 3_1_40A]
gi|345517319|ref|ZP_08796796.1| glycoside hydrolase [Bacteroides sp. 4_3_47FAA]
gi|254834081|gb|EET14390.1| glycoside hydrolase [Bacteroides sp. 4_3_47FAA]
gi|317388065|gb|EFV68919.1| hypothetical protein HMPREF9011_00612 [Bacteroides sp. 3_1_40A]
Length = 470
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 14/139 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R H++ L+N +I ++T NS TIH + C + + G+++L+ L N DG+D D
Sbjct: 160 RPHVLTLINVEKT-VIRDITIRNSAYWTIHLIGCYDALIDGISLLNNLKIRNGDGIDVDH 218
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C+IESG+ + +K+ + + +I V T+ +C+ + IG E
Sbjct: 219 SKKVRIANCFIESGDDCICLKNRREFEEYG---SCEDIVVTNCIMTSRSCA-IKIGSENM 274
Query: 126 GRIFNVTVNHLDVWMQQQG 144
+I NV N+ + +G
Sbjct: 275 DKIDNVLFNNCIIKNSNRG 293
>gi|261822466|ref|YP_003260572.1| glycoside hydrolase family protein [Pectobacterium wasabiae WPP163]
gi|261606479|gb|ACX88965.1| glycoside hydrolase family 28 [Pectobacterium wasabiae WPP163]
gi|385872775|gb|AFI91295.1| Glycoside hydrolase family 28 [Pectobacterium sp. SCC3193]
Length = 460
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC 74
R L+ + +SSN+L+ S +T +SPS I Y + V G +LSP APNTD +DP
Sbjct: 170 RPRLIYIKSSSNVLVDS-VTLTHSPSFHIVMRYSHDVDVNGTRILSPWHAPNTDAIDP-- 226
Query: 75 YIESGNGLVA---VKSGWDHDGIAMARPSSNIA------VRRVSGTTPTCSGVGIGREMS 125
I+S N + + DH I +P S + + G+ IG E S
Sbjct: 227 -IDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANNILKQGRGISIGSETS 285
Query: 126 GRIFNVTVNH 135
G + NV V +
Sbjct: 286 GGVNNVLVEN 295
>gi|212695340|ref|ZP_03303468.1| hypothetical protein BACDOR_04887 [Bacteroides dorei DSM 17855]
gi|212662069|gb|EEB22643.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 470
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 14/139 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R H++ L+N +I ++T NS T+H + C + + G+++L+ L N DG+D D
Sbjct: 160 RPHVLTLINVEKT-VIRDITIRNSAYWTVHLIGCYDALIDGISLLNNLKIRNGDGIDVDH 218
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C+IESG+ + +K+ + + +I V T+ +C+ + IG E
Sbjct: 219 SKKVRIANCFIESGDDCICLKNRREFEEYG---SCEDIVVTNCVMTSRSCA-IKIGSENM 274
Query: 126 GRIFNVTVNHLDVWMQQQG 144
+I NV N+ + +G
Sbjct: 275 DKIDNVLFNNCIIKNSNRG 293
>gi|403057463|ref|YP_006645680.1| polygalacturonase [Pectobacterium carotovorum subsp. carotovorum
PCC21]
gi|402804789|gb|AFR02427.1| polygalacturonase [Pectobacterium carotovorum subsp. carotovorum
PCC21]
Length = 402
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 39/214 (18%)
Query: 3 WDLWWNSTLKHTRGHLVELM--NSSNILIISNLTFCNSPSRTIHPVYCR-NGFVK-GMTV 58
WDL ++ +K + + L+ N S + N++ NSP+ H V+ +GF T+
Sbjct: 161 WDLAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSPN--FHVVFSDGDGFTAWKTTI 218
Query: 59 LSPLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVS 109
+P +A NTDG+DP I +G+ VA+K+ + G A R N+++ +
Sbjct: 219 KTPSTARNTDGIDPMSSKNITIAHSSISTGDDNVAIKA---YKGRAETR---NVSI--LH 270
Query: 110 GTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKIS 169
T G+ IG E G ++NVTV+ L++ G LR+ D A ++
Sbjct: 271 NEFGTGHGMSIGSETMG-VYNVTVDDLNMNGTTNG-----LRIKS------DKSAAGVVN 318
Query: 170 GISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
G+ + NVV N K P+ +I T +E+ NV
Sbjct: 319 GVRYSNVVMKNVAK-PI---VIDTVYEKKEGSNV 348
>gi|212693801|ref|ZP_03301929.1| hypothetical protein BACDOR_03322 [Bacteroides dorei DSM 17855]
gi|212663690|gb|EEB24264.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
Length = 919
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 12/129 (9%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R + +N +N+LI +T S + P+YC N ++G+TV S P+ DG+D +
Sbjct: 599 RPKTISPINCTNVLI-EGITMERSTLWNVVPIYCENVIIRGITVNS-TKVPSGDGIDIES 656
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C + G+ +K+G DG+ + +P+ N+ + R S G+ G E +
Sbjct: 657 CKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVII-RYSLAQHGHGGITCGSETA 715
Query: 126 GRIFNVTVN 134
G I N+ V+
Sbjct: 716 GVIKNLYVH 724
>gi|212695092|ref|ZP_03303220.1| hypothetical protein BACDOR_04630 [Bacteroides dorei DSM 17855]
gi|212662408|gb|EEB22982.1| hypothetical protein BACDOR_04630 [Bacteroides dorei DSM 17855]
Length = 475
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 19/132 (14%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD--- 71
R HL++ N+L+ SP TIH G + + V + N DG+D
Sbjct: 208 RPHLIQFNRCKNVLL-DGFHIEESPFWTIHMYLVDGGIARNLNVKA--MGHNNDGIDLEM 264
Query: 72 ------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR---VSGTTPTCSGVGIGR 122
DC E G+ V +KSG + D + P+ NI VR ++G T +G+G
Sbjct: 265 TRNFLIEDCVFEQGDDAVVIKSGRNQDAWRLNTPTENIVVRNCLVLAGQTL----LGVGS 320
Query: 123 EMSGRIFNVTVN 134
E+SG + N+ ++
Sbjct: 321 EISGGVRNIYMH 332
>gi|86141409|ref|ZP_01059955.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
gi|85831968|gb|EAQ50423.1| hypothetical protein MED217_05307 [Leeuwenhoekiella blandensis
MED217]
Length = 453
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 12/126 (9%)
Query: 22 MNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD-------- 73
N S +++ + NSP IHP + ++ + V + N DG+DP+
Sbjct: 210 FNRSKHILLEGIAIENSPFWVIHPYLSSDVIIREVNVFA--HGHNNDGVDPEMSQNVLIE 267
Query: 74 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 132
C + G+ +AVK+G + D + P NI +R S + IG E+SG + NV
Sbjct: 268 NCVFDQGDDAIAVKAGRNQDAWRLNTPVKNIVIRDCS-VKNGHQLLAIGSELSGGVENVY 326
Query: 133 VNHLDV 138
+ + +V
Sbjct: 327 MGNCEV 332
>gi|423242175|ref|ZP_17223285.1| hypothetical protein HMPREF1065_03908 [Bacteroides dorei
CL03T12C01]
gi|392639919|gb|EIY33727.1| hypothetical protein HMPREF1065_03908 [Bacteroides dorei
CL03T12C01]
Length = 919
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 12/129 (9%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R + +N +N+LI +T S + P+YC N ++G+TV S P+ DG+D +
Sbjct: 599 RPKTISPINCTNVLI-EGITMERSTLWNVVPIYCENVIIRGITVNS-TKVPSGDGIDIES 656
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C + G+ +K+G DG+ + +P+ N+ + R S G+ G E +
Sbjct: 657 CKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVII-RYSLAQHGHGGITCGSETA 715
Query: 126 GRIFNVTVN 134
G I N+ V+
Sbjct: 716 GVIKNLYVH 724
>gi|129937|sp|P27644.1|PGLR_RHIRD RecName: Full=Polygalacturonase; AltName: Full=PGL; AltName:
Full=Pectinase
gi|142256|gb|AAA22102.1| PGL ORF [Agrobacterium tumefaciens]
Length = 312
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 58/126 (46%), Gaps = 18/126 (14%)
Query: 33 LTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYIESGNGLV 83
T N+ S TIHP C + T+++P +PNTDG +P+ G+ +
Sbjct: 38 FTIRNAASWTIHPQGCEDLTAAASTIIAPHDSPNTDGFNPESCRNVMISGVRFSVGDDCI 97
Query: 84 AVKSG-----WDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNHLDV 138
AVK+G + D +A R I VR P G+ IG EMSG + +VTV D+
Sbjct: 98 AVKAGKRGPDGEDDHLAETR---GITVRHCL-MQPGHGGLVIGSEMSGGVHDVTVEDCDM 153
Query: 139 WMQQQG 144
+G
Sbjct: 154 IGTDRG 159
>gi|345513259|ref|ZP_08792781.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|229437122|gb|EEO47199.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
Length = 919
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 12/129 (9%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R + +N +N+LI +T S + P+YC N ++G+TV S P+ DG+D +
Sbjct: 599 RPKTISPINCTNVLI-EGITMERSTLWNVVPIYCENVIIRGITVNS-TKVPSGDGIDIES 656
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C + G+ +K+G DG+ + +P+ N+ + R S G+ G E +
Sbjct: 657 CKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVII-RYSLAQHGHGGITCGSETA 715
Query: 126 GRIFNVTVN 134
G I N+ V+
Sbjct: 716 GVIKNLYVH 724
>gi|295102197|emb|CBK99742.1| Endopolygalacturonase [Faecalibacterium prausnitzii L2-6]
Length = 518
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 25/196 (12%)
Query: 4 DLWWNSTLKHT--RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
D W + +K R V +++S NI + +T NS S TIHP++ ++ + + +P
Sbjct: 208 DWWIDPKVKRIAWRPRAVAMVDSENICL-HGITVQNSYSWTIHPIFVKHLDLLSFNINNP 266
Query: 62 LSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
+APNTDG+DP+ I G+ +A+K+ G+ + + + +R
Sbjct: 267 YNAPNTDGIDPESCEYTRIIGVNIHVGDDCIAMKASKVFLGMKLKKSCEHTVIRNCL-LD 325
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDR-LRLYGHPKEGWDPKAIPKISGI 171
G+ IG EMSG + ++ V Q + DR LR+ + G A+ I G+
Sbjct: 326 KGHGGIVIGSEMSGGVKDMVVT------QCLMDHTDRGLRV--KTRRGRGNTAV--IDGL 375
Query: 172 SFVNVVSVNTTKAPVL 187
F N V + KAP +
Sbjct: 376 VFRN-VEMRGVKAPFV 390
>gi|294776865|ref|ZP_06742328.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
gi|294449341|gb|EFG17878.1| polygalacturonase (pectinase) [Bacteroides vulgatus PC510]
Length = 594
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 12/129 (9%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R + +N +N+LI +T S + P+YC N ++G+TV S P+ DG+D +
Sbjct: 274 RPKTISPINCTNVLI-EGITMERSTLWNVVPIYCENVIIRGITVNS-TKVPSGDGIDIES 331
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C + G+ +K+G DG+ + +P+ N+ + R S G+ G E +
Sbjct: 332 CKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVI-RYSLAQHGHGGITCGSETA 390
Query: 126 GRIFNVTVN 134
G I N+ V+
Sbjct: 391 GVIKNLYVH 399
>gi|150004323|ref|YP_001299067.1| glycoside hydrolase [Bacteroides vulgatus ATCC 8482]
gi|149932747|gb|ABR39445.1| glycoside hydrolase family 28 [Bacteroides vulgatus ATCC 8482]
Length = 594
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 12/129 (9%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R + +N +N+LI +T S + P+YC N ++G+TV S P+ DG+D +
Sbjct: 274 RPKTISPINCTNVLI-EGITMERSTLWNVVPIYCENVIIRGITVNS-TKVPSGDGIDIES 331
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C + G+ +K+G DG+ + +P+ N+ + R S G+ G E +
Sbjct: 332 CKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVI-RYSLAQHGHGGITCGSETA 390
Query: 126 GRIFNVTVN 134
G I N+ V+
Sbjct: 391 GVIKNLYVH 399
>gi|333382713|ref|ZP_08474380.1| hypothetical protein HMPREF9455_02546 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828446|gb|EGK01153.1| hypothetical protein HMPREF9455_02546 [Dysgonomonas gadei ATCC
BAA-286]
Length = 469
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 14/139 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R H++ L+N +I ++T NS T+H + C + + G+T+L+ L N DG+D D
Sbjct: 160 RPHVLTLINVEKT-VIRDITIRNSAYWTVHLIGCNDASIDGITILNDLKIRNGDGIDIDH 218
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C+IESG+ + +K+ + + +I V + + +C+ + IG E
Sbjct: 219 SKNVRIANCHIESGDDCICLKNRREFEEYG---SCEDIVVTNCTMISRSCA-IKIGSENM 274
Query: 126 GRIFNVTVNHLDVWMQQQG 144
+I NV N+ + +G
Sbjct: 275 DKINNVLFNNCIIKNSNRG 293
>gi|212694769|ref|ZP_03302897.1| hypothetical protein BACDOR_04302 [Bacteroides dorei DSM 17855]
gi|345516118|ref|ZP_08795611.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|423227933|ref|ZP_17214339.1| hypothetical protein HMPREF1063_00159 [Bacteroides dorei
CL02T00C15]
gi|423239066|ref|ZP_17220182.1| hypothetical protein HMPREF1065_00805 [Bacteroides dorei
CL03T12C01]
gi|423243193|ref|ZP_17224269.1| hypothetical protein HMPREF1064_00475 [Bacteroides dorei
CL02T12C06]
gi|212662623|gb|EEB23197.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|345455530|gb|EEO44191.2| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|392637680|gb|EIY31546.1| hypothetical protein HMPREF1063_00159 [Bacteroides dorei
CL02T00C15]
gi|392646068|gb|EIY39787.1| hypothetical protein HMPREF1064_00475 [Bacteroides dorei
CL02T12C06]
gi|392647477|gb|EIY41178.1| hypothetical protein HMPREF1065_00805 [Bacteroides dorei
CL03T12C01]
Length = 465
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 62/130 (47%), Gaps = 14/130 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC 74
R HLV+ + NI I ++ N+P IH + N +G+ + L N DG+DP+
Sbjct: 203 RPHLVQFFDCKNI-TIEDVFITNAPFWCIHLLKSENIICRGIRYDAKLV--NNDGIDPEY 259
Query: 75 Y-------IESGNGL--VAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
IE NG VA+K G D+DG + PS NI +R GV +G EMS
Sbjct: 260 TRNLLIENIEFNNGDDNVAIKCGRDNDGWKTSCPSENIIIRNCK--FKGLHGVVLGSEMS 317
Query: 126 GRIFNVTVNH 135
I +V V +
Sbjct: 318 SGIQHVFVEN 327
>gi|372281193|ref|ZP_09517229.1| polygalacturonase-like protein [Oceanicola sp. S124]
Length = 861
Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 54/119 (45%), Gaps = 17/119 (14%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC---------YIESGN 80
+S +T NSPS T+HP G+ + +P +PNTDGL+P+ + G+
Sbjct: 231 LSGITVRNSPSWTVHPYRIDGLTCAGLKIQNPPDSPNTDGLNPESCTDVTLAGIHFSVGD 290
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC------SGVGIGREMSGRIFNVTV 133
+AVKSG G RR+ C G+ +G EMSG I +VTV
Sbjct: 291 DCIAVKSGKRGTGALKGLAGHLAPTRRLH--VHHCLMERGHGGMVLGSEMSGDITDVTV 347
>gi|375150362|ref|YP_005012803.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
gi|361064408|gb|AEW03400.1| Exo-poly-alpha-galacturonosidase [Niastella koreensis GR20-10]
Length = 532
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 11/132 (8%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R ++V L N +L+ N TF NSP +H +YC + G+ V + SA N DG+D
Sbjct: 208 YLRPNMVVLRNCRKVLL-QNTTFQNSPCWNLHMLYCEQLTLDGVRVRNLPSAQNGDGMDI 266
Query: 73 D--CYIE-------SGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
+ Y+E G+ + +KSG D +G + S I + + G IG E
Sbjct: 267 ESCSYVEVKNSTLDCGDDGICIKSGKDEEGRKAGKASQYIYIHD-NVVYKAHGGFVIGSE 325
Query: 124 MSGRIFNVTVNH 135
MSG ++ V +
Sbjct: 326 MSGGAHDIFVTN 337
>gi|312172794|emb|CBX81050.1| polygalacturonase [Erwinia amylovora ATCC BAA-2158]
Length = 398
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 97/209 (46%), Gaps = 45/209 (21%)
Query: 6 WW-------NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVY-CRNGF-VKGM 56
WW NS LK L+++ NS++ I ++T N+P H V+ NG V
Sbjct: 156 WWQLAAMAKNSGLKQNAPRLIQITNSTD-FTIYDITLLNAPH--FHVVFDTGNGLTVWNT 212
Query: 57 TVLSPLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR 107
T+ SP A NTDG+DP I +G+ VA+K+ + H G P+ NI+V
Sbjct: 213 TINSPRDAINTDGIDPISSKNVTIAHSNISTGDDNVAIKA-YSHKG-----PAQNISV-- 264
Query: 108 VSGTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPK 167
+ T G+ IG E +G I++V V+ L + + G LR+ D +
Sbjct: 265 IHNTFEFGHGMSIGSETNG-IYDVLVDDLTLNGTENG-----LRIKS------DRSDAGE 312
Query: 168 ISGISFVNVVSVNTTKAPVLAGIIGTQFE 196
+ G+++ NV N + PV +I T +E
Sbjct: 313 VDGVTYKNVTMTN-VRNPV---VIDTVYE 337
>gi|282601137|ref|ZP_05980861.2| glycoside hydrolase, family 77 [Subdoligranulum variabile DSM
15176]
gi|282569962|gb|EFB75497.1| polygalacturonase (pectinase) [Subdoligranulum variabile DSM 15176]
Length = 531
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 82/183 (44%), Gaps = 36/183 (19%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC 74
R LV L N N+ I S LT +SPS + +Y N V N DG DPD
Sbjct: 274 RPRLVNLSNCQNVWI-SGLTLKDSPSWILQMIYSDN-IVTDHCAFHSEGIWNGDGWDPDS 331
Query: 75 ---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAV---RRVSGTTPTCSGVGIGR 122
+ +G+ VA+KSG + +G A+ RPS++I + R SG G+ IG
Sbjct: 332 STNCTLFASELYTGDDSVAIKSGKNPEGNAIGRPSAHIYIFDCRVGSG-----QGLCIGS 386
Query: 123 EMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISFVNVVSVNTT 182
EMSG + +V + D+ + S+ G + KA K G +V V+V
Sbjct: 387 EMSGGVEDVQIWDCDL----ENSFS-----------GLEIKATAKRGG--YVRGVTVRDC 429
Query: 183 KAP 185
KAP
Sbjct: 430 KAP 432
>gi|315607918|ref|ZP_07882911.1| galacturan 1,4-alpha-galacturonidase [Prevotella buccae ATCC 33574]
gi|315250387|gb|EFU30383.1| galacturan 1,4-alpha-galacturonidase [Prevotella buccae ATCC 33574]
Length = 470
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 25/154 (16%)
Query: 2 RWDLWWNSTLKH-------------TRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYC 48
+ DLW+ L H R HLV + N+L+ +T NSP I P C
Sbjct: 185 KGDLWYPFNLTHFSNVADTYETQERYRPHLVRFTDCENVLV-KGVTLLNSPKFHIIPTRC 243
Query: 49 RNGFVKGMTVLSPLSAPNTDGLD-PDC--------YIESGNGLVAVKSGWDHDGIAMARP 99
N + G+TV P +A N D +D C I++G+ + +K+G G+ P
Sbjct: 244 TNVVIDGITVKCPWNAQNGDAIDISSCRQVLIINNVIDAGDDGICMKAGAGAKGVEYG-P 302
Query: 100 SSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV 133
+N+ + + G IG E SG + N+ V
Sbjct: 303 VANVLIEN-NTVYNAHGGFVIGSEFSGGMKNIVV 335
>gi|292488652|ref|YP_003531536.1| polygalacturonase [Erwinia amylovora CFBP1430]
gi|292899813|ref|YP_003539182.1| endo-polygalacturonase [Erwinia amylovora ATCC 49946]
gi|428785593|ref|ZP_19003084.1| polygalacturonase [Erwinia amylovora ACW56400]
gi|291199661|emb|CBJ46780.1| endo-polygalacturonase [Erwinia amylovora ATCC 49946]
gi|291554083|emb|CBA21209.1| polygalacturonase [Erwinia amylovora CFBP1430]
gi|426277155|gb|EKV54882.1| polygalacturonase [Erwinia amylovora ACW56400]
Length = 416
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 97/209 (46%), Gaps = 45/209 (21%)
Query: 6 WW-------NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVY-CRNGF-VKGM 56
WW NS LK L+++ NS++ I ++T N+P H V+ NG V
Sbjct: 174 WWQLAAMAKNSGLKQNAPRLIQITNSTD-FTIYDITLLNAPH--FHVVFDTGNGLTVWNT 230
Query: 57 TVLSPLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR 107
T+ SP A NTDG+DP I +G+ VA+K+ + H G P+ NI+V
Sbjct: 231 TINSPRDAINTDGIDPISSKNVTIAHSNISTGDDNVAIKA-YSHKG-----PAQNISV-- 282
Query: 108 VSGTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPK 167
+ T G+ IG E +G I++V V+ L + + G LR+ D +
Sbjct: 283 IHNTFEFGHGMSIGSETNG-IYDVLVDDLTLNGTENG-----LRIKS------DRSDAGE 330
Query: 168 ISGISFVNVVSVNTTKAPVLAGIIGTQFE 196
+ G+++ NV N + PV +I T +E
Sbjct: 331 VDGVTYKNVTMTN-VRNPV---VIDTVYE 355
>gi|288924892|ref|ZP_06418828.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
gi|288338082|gb|EFC76432.1| exo-poly-alpha-D-galacturonosidase [Prevotella buccae D17]
Length = 470
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 25/154 (16%)
Query: 2 RWDLWWNSTLKH-------------TRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYC 48
+ DLW+ L H R HLV + N+L+ +T NSP I P C
Sbjct: 185 KGDLWYPFNLTHFSNVADTYETQERYRPHLVRFTDCENVLV-KGVTLLNSPKFHIIPTRC 243
Query: 49 RNGFVKGMTVLSPLSAPNTDGLD-PDC--------YIESGNGLVAVKSGWDHDGIAMARP 99
N + G+TV P +A N D +D C I++G+ + +K+G G+ P
Sbjct: 244 TNVVIDGITVKCPWNAQNGDAIDISSCRQVLIVNNVIDAGDDGICMKAGAGAKGVEYG-P 302
Query: 100 SSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV 133
+N+ + + G IG E SG + N+ V
Sbjct: 303 VANVLIEN-NTVYNAHGGFVIGSEFSGGMKNIVV 335
>gi|237709329|ref|ZP_04539810.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
gi|229456714|gb|EEO62435.1| glycoside hydrolase family 28 protein [Bacteroides sp. 9_1_42FAA]
Length = 529
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 12/129 (9%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R + +N +N+LI +T S + P+YC N ++G+TV S P+ DG+D +
Sbjct: 209 RPKTISPINCTNVLI-EGITMERSTLWNVVPIYCENVIIRGITVNS-TKVPSGDGIDIES 266
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C + G+ +K+G DG+ + +P+ N+ + R S G+ G E +
Sbjct: 267 CKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVII-RYSLAQHGHGGITCGSETA 325
Query: 126 GRIFNVTVN 134
G I N+ V+
Sbjct: 326 GVIKNLYVH 334
>gi|265755004|ref|ZP_06089918.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|263234615|gb|EEZ20194.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 497
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 12/129 (9%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R + +N +N+LI +T S + P+YC N ++G+TV S P+ DG+D +
Sbjct: 177 RPKTISPINCTNVLI-EGITMERSTLWNVVPIYCENVIIRGITVNS-TKVPSGDGIDIES 234
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C + G+ +K+G DG+ + +P+ N+ + R S G+ G E +
Sbjct: 235 CKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVII-RYSLAQHGHGGITCGSETA 293
Query: 126 GRIFNVTVN 134
G I N+ V+
Sbjct: 294 GVIKNLYVH 302
>gi|402308351|ref|ZP_10827360.1| pectate lyase family protein [Prevotella sp. MSX73]
gi|400375795|gb|EJP28690.1| pectate lyase family protein [Prevotella sp. MSX73]
Length = 470
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 25/154 (16%)
Query: 2 RWDLWWNSTLKH-------------TRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYC 48
+ DLW+ L H R HLV + N+L+ +T NSP I P C
Sbjct: 185 KGDLWYPFNLTHFSNVADTYETQERYRPHLVRFTDCENVLV-KGVTLLNSPKFHIIPTRC 243
Query: 49 RNGFVKGMTVLSPLSAPNTDGLD-PDC--------YIESGNGLVAVKSGWDHDGIAMARP 99
N + G+TV P +A N D +D C I++G+ + +K+G G+ P
Sbjct: 244 TNVVIDGITVKCPWNAQNGDAIDISSCRQVLIVNNVIDAGDDGICMKAGAGAKGVEYG-P 302
Query: 100 SSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV 133
+N+ + + G IG E SG + N+ V
Sbjct: 303 VANVLIEN-NTVYNAHGGFVIGSEFSGGMKNIVV 335
>gi|253687486|ref|YP_003016676.1| glycoside hydrolase family protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251754064|gb|ACT12140.1| glycoside hydrolase family 28 [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 460
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 60/130 (46%), Gaps = 13/130 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC 74
R L+ + +SSN+L+ +T +SPS I Y + V G +LSP APNTD +DP
Sbjct: 170 RPRLIYIKSSSNVLV-DGVTLTHSPSFHIVMRYSHDVDVNGTRILSPWHAPNTDAIDP-- 226
Query: 75 YIESGNGLVA---VKSGWDHDGIAMARPSSNIA------VRRVSGTTPTCSGVGIGREMS 125
I+S N + + DH I +P S + + G+ IG E S
Sbjct: 227 -IDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANNILKQGRGISIGSETS 285
Query: 126 GRIFNVTVNH 135
G + NV V +
Sbjct: 286 GGVNNVLVEN 295
>gi|116249351|ref|YP_765192.1| polygalacturonase [Rhizobium leguminosarum bv. viciae 3841]
gi|115254001|emb|CAK12397.1| putative polygalacturonase [Rhizobium leguminosarum bv. viciae
3841]
Length = 454
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 11/118 (9%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDG--LDP-------DCYIESGN 80
IS++ C SP T+H V C + V+ +T+ + PNTDG LD DC I + +
Sbjct: 143 ISSVHICRSPMWTLHFVNCTDVAVRNVTIDNDRRLPNTDGIVLDACRGAVIEDCRISTAD 202
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNHLDV 138
+ +K+ D +A+ R NI VRR S + +C+ + IG E G + NV V
Sbjct: 203 DGICLKTSIGPDRVAIGR-CENILVRRCSVQSLSCA-LKIGTETHGDVTNVVFEDCSV 258
>gi|237710960|ref|ZP_04541441.1| glycoside hydrolase [Bacteroides sp. 9_1_42FAA]
gi|265750548|ref|ZP_06086611.1| glycoside hydrolase, family 28 [Bacteroides sp. 3_1_33FAA]
gi|229454804|gb|EEO60525.1| glycoside hydrolase [Bacteroides sp. 9_1_42FAA]
gi|263237444|gb|EEZ22894.1| glycoside hydrolase, family 28 [Bacteroides sp. 3_1_33FAA]
Length = 443
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 62/130 (47%), Gaps = 14/130 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC 74
R HLV+ + NI I ++ N+P IH + N +G+ + L N DG+DP+
Sbjct: 181 RPHLVQFFDCKNI-TIEDVFITNAPFWCIHLLKSENIICRGIRYDAKLV--NNDGIDPEY 237
Query: 75 Y-------IESGNGL--VAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
IE NG VA+K G D+DG + PS NI +R GV +G EMS
Sbjct: 238 TRNLLIENIEFNNGDDNVAIKCGRDNDGWKTSCPSENIIIRNCK--FKGLHGVVLGSEMS 295
Query: 126 GRIFNVTVNH 135
I +V V +
Sbjct: 296 SGIQHVFVEN 305
>gi|325299494|ref|YP_004259411.1| glycoside hydrolase family protein [Bacteroides salanitronis DSM
18170]
gi|324319047|gb|ADY36938.1| glycoside hydrolase family 28 [Bacteroides salanitronis DSM 18170]
Length = 471
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 61/118 (51%), Gaps = 14/118 (11%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R H++ L + L+I ++T NS T+H + CR+ + G+ +L+ L N DG+D D
Sbjct: 162 RPHVLTLTDVEK-LVIRDVTIRNSAYWTVHLIGCRDASIDGINILNNLKIRNGDGIDVDH 220
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
C+IESG+ + +K+ + + P ++ V + T+ +C+ + IG E
Sbjct: 221 SKDVRIANCFIESGDDCICLKNRREFEQYG---PCEDVVVSNCTMTSRSCA-IKIGSE 274
>gi|402491495|ref|ZP_10838283.1| polygalacturonase [Rhizobium sp. CCGE 510]
gi|401809894|gb|EJT02268.1| polygalacturonase [Rhizobium sp. CCGE 510]
Length = 454
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 11/111 (9%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDG--LDP-------DCYIESGN 80
IS++ SP T+H V C N V+ +T+ + PNTDG LD DC I + +
Sbjct: 143 ISSVHISRSPMWTLHFVDCTNVAVRNVTIENDRRLPNTDGIVLDACRGAVIEDCEISTAD 202
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 131
+ +K+ DG+A+ R NI VRR + + +C+ + IG E G I N+
Sbjct: 203 DGICLKTSIGPDGVAIGR-CENILVRRCAVQSLSCA-LKIGTETHGDITNI 251
>gi|281419687|ref|ZP_06250686.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
gi|281406216|gb|EFB36896.1| exo-poly-alpha-D-galacturonosidase [Prevotella copri DSM 18205]
Length = 467
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 66/157 (42%), Gaps = 31/157 (19%)
Query: 2 RWDLWWNSTLKH-------------TRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYC 48
+ D+W+ LKH R H++ + N+L+ +T NSP I P C
Sbjct: 184 KGDIWYPFNLKHKPNVAENMDEQEKNRTHMIRFTSCENVLV-QGVTLLNSPKFHIIPTRC 242
Query: 49 RNGFVKGMTVLSPLSAPNTDGLDPDCYIESGNGLVAVKSGWD--HDGIAMA--------- 97
+N + G+TV P +A N D +D I S ++ V + D DGI M
Sbjct: 243 KNVIIDGITVKCPWNAQNGDAID----ISSCKDVLIVNNVIDAGDDGICMKGGAGAAGVA 298
Query: 98 -RPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV 133
P NI ++ + G IG E SG + N+ V
Sbjct: 299 AGPCENINIQD-NTVYHAHGGFVIGSEFSGGMKNIVV 334
>gi|259908124|ref|YP_002648480.1| Endo-polygalacturonase [Erwinia pyrifoliae Ep1/96]
gi|224963746|emb|CAX55246.1| Endo-polygalacturonase [Erwinia pyrifoliae Ep1/96]
Length = 416
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 45/209 (21%)
Query: 6 WW-------NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCR-NGF-VKGM 56
WW N+++K L+++ NS++ + ++T NSP+ H V+ + NG V
Sbjct: 174 WWQLAAMAKNTSMKQNAPRLIQITNSTD-FTLYDITLLNSPN--FHVVFDKSNGLTVWNT 230
Query: 57 TVLSPLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR 107
T+ +P A NTDG+DP I +G+ VA+K+ + H G P+ NI+V
Sbjct: 231 TINTPRDARNTDGIDPISSENVTIAHSNISTGDDNVAIKA-YSHKG-----PAQNISV-- 282
Query: 108 VSGTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPK 167
+ T G+ IG E +G I++V V+ L + + G LR+ D +
Sbjct: 283 IHNTFSFGHGMSIGSETNG-IYDVLVDDLTLNGTENG-----LRIKS------DRSNAGE 330
Query: 168 ISGISFVNVVSVNTTKAPVLAGIIGTQFE 196
+ G+ + NV N K P+ +I T +E
Sbjct: 331 VDGVIYKNVTMTN-VKNPI---VIDTVYE 355
>gi|387870956|ref|YP_005802329.1| polygalacturonase [Erwinia pyrifoliae DSM 12163]
gi|283478042|emb|CAY73958.1| polygalacturonase [Erwinia pyrifoliae DSM 12163]
Length = 397
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 45/209 (21%)
Query: 6 WW-------NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCR-NGF-VKGM 56
WW N+++K L+++ NS++ + ++T NSP+ H V+ + NG V
Sbjct: 155 WWQLAAMAKNTSMKQNAPRLIQITNSTD-FTLYDITLLNSPN--FHVVFDKSNGLTVWNT 211
Query: 57 TVLSPLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR 107
T+ +P A NTDG+DP I +G+ VA+K+ + H G P+ NI+V
Sbjct: 212 TINTPRDARNTDGIDPISSENVTIAHSNISTGDDNVAIKA-YSHKG-----PAQNISV-- 263
Query: 108 VSGTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPK 167
+ T G+ IG E +G I++V V+ L + + G LR+ D +
Sbjct: 264 IHNTFSFGHGMSIGSETNG-IYDVLVDDLTLNGTENG-----LRIKS------DRSNAGE 311
Query: 168 ISGISFVNVVSVNTTKAPVLAGIIGTQFE 196
+ G+ + NV N K P+ +I T +E
Sbjct: 312 VDGVIYKNVTMTN-VKNPI---VIDTVYE 336
>gi|160943445|ref|ZP_02090679.1| hypothetical protein FAEPRAM212_00936 [Faecalibacterium prausnitzii
M21/2]
gi|158445305|gb|EDP22308.1| polygalacturonase (pectinase) [Faecalibacterium prausnitzii M21/2]
Length = 457
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 61/128 (47%), Gaps = 13/128 (10%)
Query: 26 NILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYI 76
N + ++T NSP T+HP C + + + VL+PL N+DG+DPD C++
Sbjct: 155 NHISFHDVTLQNSPFWTLHPAGCNDVLISNIRVLNPLDCTNSDGIDPDHSTNVRIIGCHV 214
Query: 77 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNHL 136
+ + + +K+ ++ P+ N+ + + T T + + IG E N+ V++
Sbjct: 215 QCADDCICLKTTAGNNEYG---PTKNVIISNCT-LTSTSAAIKIGTEGVADFENILVDNC 270
Query: 137 DVWMQQQG 144
+ +G
Sbjct: 271 IITGSNRG 278
>gi|266624154|ref|ZP_06117089.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288864021|gb|EFC96319.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 509
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 92/228 (40%), Gaps = 29/228 (12%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R L+ + N NI +S L + S +H +Y +G V N DG DPD
Sbjct: 248 RPRLINMSNCQNI-TMSGLKLKDGASWNVHMIYS-DGIVTNNCTFYSEGIWNGDGWDPDS 305
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C +G+ +A+KSG + +G ++RPS +I R G+ IG EMS
Sbjct: 306 STNCTIFGCTFNTGDDSIAIKSGKNPEGNEISRPSEHI--RIFDCKCAMGRGITIGSEMS 363
Query: 126 GRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIP----KISGISF----VNVV 177
G I +V + D+ + G + + G K G K + + + I F N
Sbjct: 364 GGINDVQIWDCDISSSRHG-----IEIKGTKKRGGYVKNVKVRDSRTARILFHSVGYNDD 418
Query: 178 SVNTTKAPVLAGIIGTQFEEICMKNVSLLVQAPSVKWQCRFVSGFNGQ 225
K PV I FE I + +SL Q + + GF+ +
Sbjct: 419 GAGAPKPPVFEKCI---FENIDVTGMSLSKQREWIPCDAIELCGFDEE 463
>gi|300728468|ref|ZP_07061828.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
gi|299774269|gb|EFI70901.1| exo-poly-alpha-D-galacturonosidase [Prevotella bryantii B14]
Length = 466
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 25/156 (16%)
Query: 2 RWDLWWNSTLKH-------------TRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYC 48
+ DLW+ LKH R HL+ L + N+LI +T NSP I P C
Sbjct: 183 KGDLWYPFNLKHFDNIAATPEAQEKMRTHLIRLTDCENVLI-QGVTVENSPKFHIVPQRC 241
Query: 49 RNGFVKGMTVLSPLSAPNTDGLD-PDC--------YIESGNGLVAVKSGWDHDGIAMARP 99
+N + G+TV P +A N D +D +C I++G+ + +K G + P
Sbjct: 242 KNVIIDGVTVRCPWNAQNGDAIDIGNCTNVLIVNNVIDAGDDGICMKGGAGAKALEYG-P 300
Query: 100 SSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
NI ++ + G IG E SG + N+ V++
Sbjct: 301 CLNINIQD-NIVYHAHGGFVIGSEFSGGMKNIYVHN 335
>gi|358065987|ref|ZP_09152521.1| hypothetical protein HMPREF9473_04584 [Clostridium hathewayi
WAL-18680]
gi|356695850|gb|EHI57475.1| hypothetical protein HMPREF9473_04584 [Clostridium hathewayi
WAL-18680]
Length = 425
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Query: 28 LIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYIES 78
L + ++TF ++ T+H CRN V G+ +L+ PN DG+DPD C IES
Sbjct: 133 LTVRDVTFYDAAFWTLHMAGCRNVMVDGVRILNNDRGPNNDGIDPDSCKNVVIRNCIIES 192
Query: 79 GNGLVAVKS 87
G+ + VKS
Sbjct: 193 GDDAIVVKS 201
>gi|206564620|ref|YP_002235383.1| putative polygalacturonate hydrolase [Burkholderia cenocepacia
J2315]
gi|444359790|ref|ZP_21161085.1| polygalacturonase domain protein [Burkholderia cenocepacia BC7]
gi|444367969|ref|ZP_21167846.1| polygalacturonase domain protein [Burkholderia cenocepacia
K56-2Valvano]
gi|198040660|emb|CAR56646.1| putative polygalacturonate hydrolase [Burkholderia cenocepacia
J2315]
gi|443601359|gb|ELT69502.1| polygalacturonase domain protein [Burkholderia cenocepacia BC7]
gi|443601809|gb|ELT69929.1| polygalacturonase domain protein [Burkholderia cenocepacia
K56-2Valvano]
Length = 665
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 15/135 (11%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R +VE + +N+L+ +N N+P HP RN ++G+T S PN DG DP
Sbjct: 333 YLRPCMVEFIGCTNVLM-ANYQTQNTPFWQHHPTASRNVVIRGVTTNS--IGPNNDGFDP 389
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
D C +G+ +A+KSG D D P+ +R + + G+ +G E
Sbjct: 390 DACTDVLCEDCTFNTGDDCIAIKSGKDRD--TEYGPAKRHLIRNCTMNS-GHGGITLGSE 446
Query: 124 MSGRIFNVTVNHLDV 138
M G + + ++L +
Sbjct: 447 MGGGVEQIYASNLSM 461
>gi|403057563|ref|YP_006645780.1| polygalacturonase [Pectobacterium carotovorum subsp. carotovorum
PCC21]
gi|402804889|gb|AFR02527.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 460
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 13/130 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC 74
R L+ + +SSN+L+ +T +SPS + Y + V G +LSP APNTD +DP
Sbjct: 170 RPRLIYIKSSSNVLV-DGVTLTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDAIDP-- 226
Query: 75 YIESGNGLVA---VKSGWDHDGIAMARPSSNIA------VRRVSGTTPTCSGVGIGREMS 125
I+S N + + DH I +P S + + G+ IG E S
Sbjct: 227 -IDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANNILKQGRGISIGSETS 285
Query: 126 GRIFNVTVNH 135
G + NV V +
Sbjct: 286 GGVNNVLVEN 295
>gi|421863816|ref|ZP_16295509.1| Polygalacturonase [Burkholderia cenocepacia H111]
gi|358076142|emb|CCE46387.1| Polygalacturonase [Burkholderia cenocepacia H111]
Length = 665
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 15/135 (11%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R +VE + +N+L+ +N N+P HP RN ++G+T S PN DG DP
Sbjct: 333 YLRPCMVEFIGCTNVLM-ANYQTQNTPFWQHHPTASRNVVIRGVTTNS--IGPNNDGFDP 389
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
D C +G+ +A+KSG D D P+ +R + + G+ +G E
Sbjct: 390 DACTDVLCEDCTFNTGDDCIAIKSGKDRD--TEYGPAKRHLIRNCTMNS-GHGGITLGSE 446
Query: 124 MSGRIFNVTVNHLDV 138
M G + + ++L +
Sbjct: 447 MGGGVEQIYASNLSM 461
>gi|291459617|ref|ZP_06599007.1| polygalacturonase [Oribacterium sp. oral taxon 078 str. F0262]
gi|291417895|gb|EFE91614.1| polygalacturonase [Oribacterium sp. oral taxon 078 str. F0262]
Length = 526
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 37 NSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYIESGNGLVAVKS 87
NSPS TIHP Y + +T+ +P +PNTDG DP+ C I G+ +A+KS
Sbjct: 244 NSPSWTIHPYYTDGISLYNVTIWNPPDSPNTDGFDPESCEDVLLLGCRISVGDDCIAIKS 303
Query: 88 GWDHDGIAMARPSSNIAVR 106
G + S N A+R
Sbjct: 304 GKARMAGERRKASRNFALR 322
>gi|266621133|ref|ZP_06114068.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
gi|288867222|gb|EFC99520.1| putative polygalacturonase [Clostridium hathewayi DSM 13479]
Length = 517
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 19/152 (12%)
Query: 3 WDLWWNS--TLKHT-RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
++ WW T++ R +V L +I + NSP+ +HP + + + +
Sbjct: 205 FENWWKDAGTMRGAFRPRMVFLERCKDI-TLQGFYLKNSPAWVLHPYFSQGLRFLDLDIE 263
Query: 60 SPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRV-- 108
+P +PNTDGLDP+ + G+ +AVKSG + G PS NI +R+
Sbjct: 264 NPADSPNTDGLDPESCKDVEITGLHFSLGDDCIAVKSGKIYMGRRYKTPSENIEIRQCLM 323
Query: 109 ---SGTTPTCSGVGIGREMSGRIFNVTVNHLD 137
G S VG G + + R+ + H D
Sbjct: 324 ENGHGAVTVGSEVGAGVK-AVRVRDCLFRHTD 354
>gi|227114428|ref|ZP_03828084.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 460
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 13/130 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC 74
R L+ + +SSN+L+ +T +SPS + Y + V G +LSP APNTD +DP
Sbjct: 170 RPRLIYIKSSSNVLV-DGVTLTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDAIDP-- 226
Query: 75 YIESGNGLVA---VKSGWDHDGIAMARPSSNIA------VRRVSGTTPTCSGVGIGREMS 125
I+S N + + DH I +P S + + G+ IG E S
Sbjct: 227 -IDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANNILKQGRGISIGSETS 285
Query: 126 GRIFNVTVNH 135
G + NV V +
Sbjct: 286 GGVNNVLVEN 295
>gi|218129054|ref|ZP_03457858.1| hypothetical protein BACEGG_00628 [Bacteroides eggerthii DSM 20697]
gi|217988689|gb|EEC55008.1| polygalacturonase (pectinase) [Bacteroides eggerthii DSM 20697]
Length = 492
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R + +N N+LI +T S + P+YC N ++G+TV S P+ DG+D +
Sbjct: 177 RPKTISPINCRNVLI-EGITMERSTLWNVVPIYCENVIIRGITVNS-TEVPSGDGIDIES 234
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C + G+ +K+G DG+ + + + N+ +R S G+ IG E +
Sbjct: 235 CKNVLIEYCTLNCGDDCFTLKAGRADDGLRVGKATENVVIRH-SLAQHGHGGITIGSETA 293
Query: 126 GRIFNVTVN 134
G I N+ V+
Sbjct: 294 GMIKNLYVH 302
>gi|50120129|ref|YP_049296.1| polygalacturonase [Pectobacterium atrosepticum SCRI1043]
gi|49610655|emb|CAG74100.1| putative polygalacturonase [Pectobacterium atrosepticum SCRI1043]
Length = 460
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 13/130 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC 74
R L+ + +SSN+L+ +T +SPS + Y + V G +LSP APNTD +DP
Sbjct: 170 RPRLIYIKSSSNVLV-DGVTLTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDAIDP-- 226
Query: 75 YIESGNGLVA---VKSGWDHDGIAMARPSSNIA------VRRVSGTTPTCSGVGIGREMS 125
I+S N + + DH I +P S + + G+ IG E S
Sbjct: 227 -IDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANNILKQGRGISIGSETS 285
Query: 126 GRIFNVTVNH 135
G + NV V +
Sbjct: 286 GGVNNVLVEN 295
>gi|295105134|emb|CBL02678.1| Endopolygalacturonase [Faecalibacterium prausnitzii SL3/3]
Length = 457
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 61/128 (47%), Gaps = 13/128 (10%)
Query: 26 NILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYI 76
N + ++T NSP T+HP C + + + VL+PL N+DG+DPD C++
Sbjct: 155 NHISFHDVTLQNSPFWTLHPAGCNDVLISNIRVLNPLDCTNSDGIDPDHSTNVRIIGCHV 214
Query: 77 ESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNHL 136
+ + + +K+ ++ P+ N+ + + T T + + IG E N+ V++
Sbjct: 215 QCADDCICLKTTAGNNEYG---PTKNVIISNCT-LTSTSAAIKIGTEGVADFENILVDNC 270
Query: 137 DVWMQQQG 144
+ +G
Sbjct: 271 IITGTNRG 278
>gi|254249598|ref|ZP_04942918.1| Endopolygalacturonase [Burkholderia cenocepacia PC184]
gi|124876099|gb|EAY66089.1| Endopolygalacturonase [Burkholderia cenocepacia PC184]
Length = 667
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 15/135 (11%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R +VE + +N+L+ +N N+P HP RN ++G+T S PN DG DP
Sbjct: 335 YLRPCMVEFIGCTNVLM-ANYQTQNTPFWQHHPTASRNVVIRGVTTNS--IGPNNDGFDP 391
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
D C +G+ +A+KSG D D P+ +R + + G+ +G E
Sbjct: 392 DACTDVLCEDCTFNTGDDCIAIKSGKDRD--VEYGPAKRHLIRNCTMNS-GHGGITLGSE 448
Query: 124 MSGRIFNVTVNHLDV 138
M G + + +L +
Sbjct: 449 MGGGVEQIYATNLSM 463
>gi|170736971|ref|YP_001778231.1| glycoside hydrolase family protein [Burkholderia cenocepacia MC0-3]
gi|169819159|gb|ACA93741.1| glycoside hydrolase family 28 [Burkholderia cenocepacia MC0-3]
Length = 665
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 15/135 (11%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R +VE + +N+L+ +N N+P HP RN ++G+T S PN DG DP
Sbjct: 333 YLRPCMVEFIGCTNVLM-ANYQTQNTPFWQHHPTASRNVVIRGVTTNS--IGPNNDGFDP 389
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
D C +G+ +A+KSG D D P+ +R + + G+ +G E
Sbjct: 390 DACTDVLCEDCTFNTGDDCIAIKSGKDRD--TEYGPAKRHLIRNCTMNS-GHGGITLGSE 446
Query: 124 MSGRIFNVTVNHLDV 138
M G + + +L +
Sbjct: 447 MGGGVEQIYATNLSM 461
>gi|317474838|ref|ZP_07934108.1| glycoside hydrolase [Bacteroides eggerthii 1_2_48FAA]
gi|316908976|gb|EFV30660.1| glycoside hydrolase [Bacteroides eggerthii 1_2_48FAA]
Length = 492
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R + +N N+LI +T S + P+YC N ++G+TV S P+ DG+D +
Sbjct: 177 RPKTISPINCRNVLI-EGITMERSTLWNVVPIYCENVIIRGITVNS-TEVPSGDGIDIES 234
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C + G+ +K+G DG+ + + + N+ +R S G+ IG E +
Sbjct: 235 CKNILIEYCTLNCGDDCFTLKAGRADDGLRVGKATENVVIRH-SLAQHGHGGITIGSETA 293
Query: 126 GRIFNVTVN 134
G I N+ V+
Sbjct: 294 GMIKNLYVH 302
>gi|421083085|ref|ZP_15543964.1| Glycoside hydrolase family 28 [Pectobacterium wasabiae CFBP 3304]
gi|401702311|gb|EJS92555.1| Glycoside hydrolase family 28 [Pectobacterium wasabiae CFBP 3304]
Length = 460
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 13/130 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC 74
R L+ + +SSN+L+ +T +SPS + Y + V G +LSP APNTD +DP
Sbjct: 170 RPRLIYIKSSSNVLV-DGVTLTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDAIDP-- 226
Query: 75 YIESGNGLVA---VKSGWDHDGIAMARPSSNIA------VRRVSGTTPTCSGVGIGREMS 125
I+S N + + DH I +P S + + G+ IG E S
Sbjct: 227 -IDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANNILKQGRGISIGSETS 285
Query: 126 GRIFNVTVNH 135
G + NV V +
Sbjct: 286 GGVNNVLVEN 295
>gi|409199011|ref|ZP_11227674.1| endopolygalacturonase [Marinilabilia salmonicolor JCM 21150]
Length = 568
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 28 LIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC---------YIES 78
+++ TF NSP+ IHP+ + ++ +T+ +P + N DGLD + +
Sbjct: 248 ILLDGPTFQNSPAWNIHPLMSEDVTIRNLTIRNPWYSQNGDGLDLESCKNVVIYNNTFDV 307
Query: 79 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTV 133
G+ + KSG + DG P+ N+ V+ + G +G EMSG + NV V
Sbjct: 308 GDDAICFKSGKNEDGRRRGIPTENVIVKN-NIVYHGHGGFVVGSEMSGDVRNVHV 361
>gi|387904260|ref|YP_006334598.1| Polygalacturonase [Burkholderia sp. KJ006]
gi|387579152|gb|AFJ87867.1| Polygalacturonase [Burkholderia sp. KJ006]
Length = 664
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 15/135 (11%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R +VE + +N+L+ N N+P HP RN ++G+T S PN DG DP
Sbjct: 332 YLRPCMVEFIGCTNVLM-ENYQTQNTPFWQHHPTASRNVVIRGVTTNS--IGPNNDGFDP 388
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
D C +G+ VA+KSG D D P+ +R + + G+ +G E
Sbjct: 389 DACTDVLCERCTFNTGDDCVAIKSGKDRD--TEYGPAKRHLIRDCTMNS-GHGGITLGSE 445
Query: 124 MSGRIFNVTVNHLDV 138
M G + + +L +
Sbjct: 446 MGGGVEQIYATNLSM 460
>gi|374311245|ref|YP_005057675.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358753255|gb|AEU36645.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 467
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 42 TIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHD 92
+IHP C N + +T+ S + N DG+D D C I SG+ +++KSG +
Sbjct: 200 SIHPTCCDNLVFRNLTIRS--TKTNGDGIDIDSCRHVLIDSCDIASGDDCISLKSGRGEE 257
Query: 93 GIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
M RP+ ++ + + + +GIG E S I NV + H
Sbjct: 258 AYTMNRPTEDVRITNCTLEGRGFACLGIGTESSAGIRNVIIEH 300
>gi|238024144|ref|YP_002908376.1| glycoside hydrolase [Burkholderia glumae BGR1]
gi|237878809|gb|ACR31141.1| Glycoside hydrolase [Burkholderia glumae BGR1]
Length = 673
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 61/139 (43%), Gaps = 21/139 (15%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC 74
R +VE + +N+L+ N N+P HP C N ++G V++ PN DG DPD
Sbjct: 343 RPCMVEFIGCTNVLM-ENYHTQNTPFWQHHPTDCTNVVIRG--VMADSIGPNNDGFDPDA 399
Query: 75 ---------YIESGNGLVAVKSGWDHD---GIAMARPSSNIAVRRVSGTTPTCSGVGIGR 122
+G+ +A+KSG D D G A N + G G+ +G
Sbjct: 400 CNNVLCDGMVFNTGDDCIAIKSGKDLDTEYGAAQNHVVQNCTMNSGHG------GITLGS 453
Query: 123 EMSGRIFNVTVNHLDVWMQ 141
EM G I NV +L + Q
Sbjct: 454 EMGGGIENVYARNLTMLNQ 472
>gi|385788697|ref|YP_005819806.1| polygalacturonase [Erwinia sp. Ejp617]
gi|310767969|gb|ADP12919.1| polygalacturonase [Erwinia sp. Ejp617]
Length = 409
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 45/209 (21%)
Query: 6 WW-------NSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCR-NGF-VKGM 56
WW N+++K L+++ NS++ + ++T NSP+ H V+ + NG V
Sbjct: 155 WWQLAAMAKNTSMKQNAPRLIQITNSTD-FTLYDITLLNSPN--FHVVFDKSNGLTVWNT 211
Query: 57 TVLSPLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR 107
T+ +P A NTDG+DP I +G+ VA+K+ + H G P+ NI+V
Sbjct: 212 TINTPGDARNTDGIDPISSENVTIAHSNISTGDDNVAIKA-YSHKG-----PAQNISV-- 263
Query: 108 VSGTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPK 167
+ T G+ IG E +G I++V V+ L + + G LR+ D +
Sbjct: 264 IHNTFGFGHGMSIGSETNG-IYDVLVDDLTLSGTENG-----LRIKS------DRSNAGE 311
Query: 168 ISGISFVNVVSVNTTKAPVLAGIIGTQFE 196
+ G+ + NV N K P+ +I T +E
Sbjct: 312 VDGVIYKNVTMTN-VKNPI---VIDTVYE 336
>gi|291514459|emb|CBK63669.1| Endopolygalacturonase [Alistipes shahii WAL 8301]
Length = 555
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 18 LVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD------ 71
++ + + N+L+ + F NSP IHP C N V +TV P A N DG+D
Sbjct: 229 MIAVHHCENVLL-EGVIFQNSPCWNIHPAMCTNLIVNDITVRCPDYAQNGDGIDIESCRN 287
Query: 72 ---PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 128
+ + G+ + +KSG D G P NI V G +G EMSG +
Sbjct: 288 VVLTNSRFDVGDDGICIKSGKDKAGRDRGIPCENILVDNCI-VFHGHGGFVVGSEMSGGV 346
Query: 129 FNVTVNH 135
NV V++
Sbjct: 347 RNVRVSN 353
>gi|254254779|ref|ZP_04948096.1| Endopolygalacturonase [Burkholderia dolosa AUO158]
gi|124899424|gb|EAY71267.1| Endopolygalacturonase [Burkholderia dolosa AUO158]
Length = 668
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 15/135 (11%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R +VE + +N+L+ T N+P HP CRN ++G+T S PN DG DP
Sbjct: 336 YLRPCMVEFIGCTNVLMADYQTQ-NTPFWQHHPTACRNVVIRGVTTNS--IGPNNDGFDP 392
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
D C +G+ +A+KSG + D P+ +R + + G+ +G E
Sbjct: 393 DACTDVLCEECTFNTGDDCIAIKSGKNLD--TEYGPAKRHLIRNCTMNS-GHGGITLGSE 449
Query: 124 MSGRIFNVTVNHLDV 138
M G + + +L +
Sbjct: 450 MGGGVEQIYATNLSM 464
>gi|302671860|ref|YP_003831820.1| polygalacturonase Pgl28A [Butyrivibrio proteoclasticus B316]
gi|302396333|gb|ADL35238.1| polygalacturonase Pgl28A [Butyrivibrio proteoclasticus B316]
Length = 524
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYIESGN 80
+ N+ NSP T+HP Y + + + +P +PNTDGLDP+ I G+
Sbjct: 234 VQNVRVQNSPCWTVHPYYSDDLAFLNLYIHNPSDSPNTDGLDPESCKNVLVAGTTISVGD 293
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
+A+KSG + + + + NI +R S V +G E++G + NV V
Sbjct: 294 DCMAIKSGKFYMSMEHHKVTENIIIRNCRFERGHGS-VTVGSEVAGGVKNVRVTQ 347
>gi|374311248|ref|YP_005057678.1| glycoside hydrolase family protein [Granulicella mallensis
MP5ACTX8]
gi|358753258|gb|AEU36648.1| glycoside hydrolase family 28 [Granulicella mallensis MP5ACTX8]
Length = 461
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 13/138 (9%)
Query: 5 LWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSA 64
L W + R LV++ NS +I + S L S T+H Y + V G+T+ +
Sbjct: 163 LRWAADYDAKRPRLVQIFNSDHIKL-SGLMLKRSGFWTVHICYSHDIEVDGVTIRNNEDG 221
Query: 65 --PNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
P+TDG+D D I + + +K+G D DG+ + RP+ ++ ++ S
Sbjct: 222 KGPSTDGIDIDSSKKILVQHADISVNDDALCLKAGRDSDGLRVNRPTEDVVLKD-SVVRA 280
Query: 114 TCSGVGIGREMSGRIFNV 131
+GV G E SG NV
Sbjct: 281 GAAGVTFGSETSGGFRNV 298
>gi|418299606|ref|ZP_12911438.1| polygalacturonase-like protein [Agrobacterium tumefaciens
CCNWGS0286]
gi|355534759|gb|EHH04058.1| polygalacturonase-like protein [Agrobacterium tumefaciens
CCNWGS0286]
Length = 517
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 70/160 (43%), Gaps = 27/160 (16%)
Query: 2 RWDLWWNSTLKHTRG-HLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
RW + RG HLV +N+L T N+ S TIHP C + G+++ +
Sbjct: 215 RWPKETRDGARRPRGLHLVSC-RKTNLL---GFTIRNAASWTIHPQGCEDLIAAGLSIAA 270
Query: 61 PLSAPNTDGLDPD---------CYIESGNGLVAVKSG-----WDHDGIAMAR--PSSNIA 104
P +PNTDG +P+ G+ +AVK+G + D +A R +
Sbjct: 271 PHDSPNTDGFNPESCRNVTISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRGVRVGHCL 330
Query: 105 VRRVSGTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG 144
+ R G G+ IG EMSG + +V V D+ +G
Sbjct: 331 MERGHG------GLVIGSEMSGGVHDVAVEDCDMIGTDRG 364
>gi|239628551|ref|ZP_04671582.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239518697|gb|EEQ58563.1| glycoside Hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 710
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP-- 72
R + ++++ N+L+ ++ N P ++PV C N V+G+ V + N DG +P
Sbjct: 201 RPNFIQVIGCENVLV-EGISIKNPPMWGVNPVLCTNVTVRGIEVDGNFN--NNDGCNPEN 257
Query: 73 -------DCYIESGNGLVAVKSGWDHDGIAMARP---SSNIAVR--RVSGTTPTCSGVGI 120
DC + G VAVKSG + DG + + N+ +R +G T SG+
Sbjct: 258 CNYVLIEDCRFQVGGDGVAVKSGRNRDGWELKEAGWSARNMVIRGNEFAGGT---SGIAF 314
Query: 121 GREMSGRIFNVTVN 134
G EMSG I ++ +
Sbjct: 315 GSEMSGDIRDIYAD 328
>gi|313114438|ref|ZP_07799963.1| polygalacturonase [Faecalibacterium cf. prausnitzii KLE1255]
gi|310623236|gb|EFQ06666.1| polygalacturonase [Faecalibacterium cf. prausnitzii KLE1255]
Length = 510
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 25/196 (12%)
Query: 4 DLWWNSTLKHT--RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSP 61
D W +K R V ++S NI + +T NS S TIHP++ ++ + + +P
Sbjct: 200 DWWVTPKIKRIAWRPRAVAAVDSENICL-HGITVQNSYSWTIHPIFVKHLDLLNFNINNP 258
Query: 62 LSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT 112
+APNTDG+DP+ I G+ +A+K+ G+ + + + +R
Sbjct: 259 YNAPNTDGIDPESCEYIRIIGVNIHVGDDCIAMKASKVFLGMKLKKSCEHTVIRNCL-LD 317
Query: 113 PTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDR-LRLYGHPKEGWDPKAIPKISGI 171
G+ IG EMSG + ++ V Q + DR LR+ + G A+ I G+
Sbjct: 318 KGHGGIVIGSEMSGGVKDMVVT------QCLMDHTDRGLRV--KTRRGRGNTAV--IDGL 367
Query: 172 SFVNVVSVNTTKAPVL 187
F N V + KAP +
Sbjct: 368 VFRN-VEMRGVKAPFV 382
>gi|393764308|ref|ZP_10352920.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella agri BL06]
gi|392604938|gb|EIW87837.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella agri BL06]
Length = 481
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 12/113 (10%)
Query: 28 LIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYIES 78
++I +T NSP I+PV + V+ + +S PN+DG +P+ C ++
Sbjct: 243 VLIEGVTIRNSPFWLINPVLSEDVIVRNVNCIS--YGPNSDGCNPESCNRVLIENCLFDT 300
Query: 79 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 131
G+ +A+KSG ++DG +A P N+ ++ GV +G E+SG N+
Sbjct: 301 GDDCIALKSGRNNDGRRLATPVQNVVIQDCI-MRAGHGGVVMGSEISGGARNI 352
>gi|345519938|ref|ZP_08799345.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
gi|254836194|gb|EET16503.1| glycoside hydrolase family 28 [Bacteroides sp. 4_3_47FAA]
Length = 594
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R + +N +N+LI + S + P+YC N ++G+TV S P+ DG+D +
Sbjct: 274 RPKTISPINCTNVLI-EGIAMERSTLWNVVPIYCENVIIRGITVNS-TKVPSGDGIDIES 331
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C + G+ +K+G DG+ + +P+ N+ + R S G+ G E +
Sbjct: 332 CKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVI-RYSLAQHGHGGITCGSETA 390
Query: 126 GRIFNVTVN 134
G I N+ V+
Sbjct: 391 GVIKNLYVH 399
>gi|397170830|ref|ZP_10494240.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella aestuarii B11]
gi|396087304|gb|EJI84904.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella aestuarii B11]
Length = 481
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 12/113 (10%)
Query: 28 LIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYIES 78
++I +T NSP I+PV + V+ + +S PN+DG +P+ C ++
Sbjct: 243 VLIEGVTIRNSPFWLINPVLSEDVIVRNVNCIS--YGPNSDGCNPESCNRVLIENCLFDT 300
Query: 79 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 131
G+ +A+KSG ++DG +A P N+ ++ GV +G E+SG N+
Sbjct: 301 GDDCIALKSGRNNDGRRLATPVQNVVIQDCI-MRAGHGGVVMGSEISGGARNI 352
>gi|320107891|ref|YP_004183481.1| glycoside hydrolase family protein [Terriglobus saanensis SP1PR4]
gi|319926412|gb|ADV83487.1| glycoside hydrolase family 28 [Terriglobus saanensis SP1PR4]
Length = 408
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 26/138 (18%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP---------DCYIESGN 80
+ N+T NS I P Y + + M VL+P ++ NTDG+DP YI++G+
Sbjct: 157 MENITAQNSAMWQIVPYYSDDLVFRNMKVLAPQTSHNTDGIDPFASTKIVIDHVYIDTGD 216
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCS-----GVGIGREMSGRIFNVTVNH 135
VA+KSG P ++ R + T C G+ IG E++G + NV
Sbjct: 217 DNVAIKSGQP------GSPGPDLPSRDI--TITDCEFLHGHGLSIGSEIAGGVQNVRAER 268
Query: 136 LDVWMQQQG----SYKDR 149
+ QG S +DR
Sbjct: 269 IHFKGTDQGIRVKSNRDR 286
>gi|375109255|ref|ZP_09755504.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella jeotgali KCTC 22429]
gi|374570559|gb|EHR41693.1| glycoside hydrolase family 28 domain-containing protein
[Alishewanella jeotgali KCTC 22429]
Length = 481
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 12/113 (10%)
Query: 28 LIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYIES 78
++I +T NSP I+PV + V+ + +S PN+DG +P+ C ++
Sbjct: 243 VLIEGVTIRNSPFWLINPVLSEDVIVRNVNCIS--YGPNSDGCNPESCNRVLIENCLFDT 300
Query: 79 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 131
G+ +A+KSG ++DG +A P N+ ++ GV +G E+SG N+
Sbjct: 301 GDDCIALKSGRNNDGRRLATPVQNVVIQDCI-MRAGHGGVVMGSEISGGARNI 352
>gi|134292563|ref|YP_001116299.1| glycoside hydrolase family protein [Burkholderia vietnamiensis G4]
gi|134135720|gb|ABO56834.1| glycoside hydrolase, family 28 [Burkholderia vietnamiensis G4]
Length = 664
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 15/135 (11%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R +VE + +N+L+ N N+P HP RN ++G+T S PN DG DP
Sbjct: 332 YLRPCMVEFIGCTNVLM-ENYQTQNTPFWQHHPTASRNVVIRGVTTNS--IGPNNDGFDP 388
Query: 73 D---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
D C +G+ +A+KSG D D P+ +R + + G+ +G E
Sbjct: 389 DACTDVLCERCTFNTGDDCIAIKSGKDRD--TEYGPAKRHLIRDCTMNS-GHGGITLGSE 445
Query: 124 MSGRIFNVTVNHLDV 138
M G + + +L +
Sbjct: 446 MGGGVEQIYATNLSM 460
>gi|218133835|ref|ZP_03462639.1| hypothetical protein BACPEC_01724 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991210|gb|EEC57216.1| polygalacturonase (pectinase) [[Bacteroides] pectinophilus ATCC
43243]
Length = 521
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 12/113 (10%)
Query: 6 WWNSTLKHT--RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
W+N +++ R L + + N+ + +T NSPS T+HP + + + + +P +
Sbjct: 214 WYNVKVRNIAWRPRLFFINHCRNV-TMHGITVQNSPSWTLHPYFSDHLKFIDVKIKNPAN 272
Query: 64 APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRR 107
+ NTDGLDP+ YI G+ +A+KSG + G P+S++ VR+
Sbjct: 273 SHNTDGLDPESCTDVRVLGTYISVGDDCIAIKSGKIYMGRKHKIPTSDMEVRQ 325
>gi|319644257|ref|ZP_07998770.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
gi|317384248|gb|EFV65220.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_40A]
Length = 580
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R + +N +N+LI + S + P+YC N ++G+TV S P+ DG+D +
Sbjct: 260 RPKTISPINCTNVLI-EGIAMERSTLWNVVPIYCENVIIRGITVNS-TKVPSGDGIDIES 317
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C + G+ +K+G DG+ + +P+ N+ + R S G+ G E +
Sbjct: 318 CKNVLIEYCTLNCGDDCFTLKAGRAEDGLRVGKPTENVVI-RYSLAQHGHGGITCGSETA 376
Query: 126 GRIFNVTVN 134
G I N+ V+
Sbjct: 377 GVIKNLYVH 385
>gi|424911961|ref|ZP_18335338.1| endopolygalacturonase [Rhizobium leguminosarum bv. viciae USDA
2370]
gi|392847992|gb|EJB00515.1| endopolygalacturonase [Rhizobium leguminosarum bv. viciae USDA
2370]
Length = 517
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 29/160 (18%)
Query: 6 WWN------STLKHTRG-HLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTV 58
WW+ + RG HLV S + + T N+ S TIHP C + G+T+
Sbjct: 213 WWSWPKETRDGARRPRGLHLV----SCRKIQLLGFTIKNAASWTIHPQGCEDLIAAGLTI 268
Query: 59 LSPLSAPNTDGLDPD---------CYIESGNGLVAVKSG-----WDHDGIAMARPSSNIA 104
+P +PNTDG +P+ G+ +AVK+G + D +A R I
Sbjct: 269 NAPHDSPNTDGFNPESCRNVTISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETR---GIR 325
Query: 105 VRRVSGTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG 144
VR G+ IG EMSG + +V+V D+ +G
Sbjct: 326 VRHCL-MERGHGGLVIGSEMSGGVHDVSVEDCDMVGTDRG 364
>gi|408789181|ref|ZP_11200887.1| polygalacturonase-like protein [Rhizobium lupini HPC(L)]
gi|408485004|gb|EKJ93352.1| polygalacturonase-like protein [Rhizobium lupini HPC(L)]
Length = 519
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 29/160 (18%)
Query: 6 WWN------STLKHTRG-HLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTV 58
WW+ + RG HLV S + + T N+ S TIHP C + G+T+
Sbjct: 215 WWSWPKETRDGARRPRGLHLV----SCRKIQLLGFTIKNAASWTIHPQGCEDLIAAGLTI 270
Query: 59 LSPLSAPNTDGLDPD---------CYIESGNGLVAVKSG-----WDHDGIAMARPSSNIA 104
+P +PNTDG +P+ G+ +AVK+G + D +A R I
Sbjct: 271 NAPHDSPNTDGFNPESCRNVTISGVRFSVGDDCIAVKAGKRSPDGEDDHLAETR---GIR 327
Query: 105 VRRVSGTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQG 144
VR G+ IG EMSG + +V+V D+ +G
Sbjct: 328 VRHCL-MERGHGGLVIGSEMSGGVHDVSVEDCDMVGTDRG 366
>gi|4185608|dbj|BAA74431.1| Peh [Pectobacterium carotovorum]
Length = 402
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 39/214 (18%)
Query: 3 WDLWWNSTLKHTRGHLVELM--NSSNILIISNLTFCNSPSRTIHPVYCR-NGFVK-GMTV 58
WDL ++ +K + + L+ N S + N++ NSP+ H V+ +GF T+
Sbjct: 161 WDLAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSPN--FHVVFSDGDGFTAWKTTI 218
Query: 59 LSPLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVS 109
+P +A NTDG+DP I +G+ VA+K+ + G + R NI++ +
Sbjct: 219 KTPSTARNTDGIDPMSSKNITIAHSNISTGDDNVAIKA---YKGRSETR---NISI--LH 270
Query: 110 GTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKIS 169
T G+ IG E G ++NVTV+ L + G LR+ D A ++
Sbjct: 271 NEFGTGHGMSIGSETMG-VYNVTVDDLVMTGTTNG-----LRIKS------DKSAAGVVN 318
Query: 170 GISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
G+ + NVV N K P+ +I T +E+ NV
Sbjct: 319 GVRYSNVVMKNVAK-PI---VIDTVYEKKEGSNV 348
>gi|423223572|ref|ZP_17210041.1| hypothetical protein HMPREF1062_02227 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638197|gb|EIY32044.1| hypothetical protein HMPREF1062_02227 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 551
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 18/121 (14%)
Query: 28 LIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD---------PDCYIES 78
+++ + F NSP +H R+ V + V P A N DG+D D + +
Sbjct: 239 VLLEGIVFQNSPCWNVHLSLSRDIIVHNIAVRCPWYAKNGDGIDIESCTNLLLTDSWFDV 298
Query: 79 GNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTC----SGVGIGREMSGRIFNVTVN 134
G+ + +KSG D +G P+SNI V C G +G EMSG + N+ V+
Sbjct: 299 GDDAICIKSGKDEEGRRRGIPASNIIVDNC-----VCYHGHGGFVVGSEMSGGVKNIAVS 353
Query: 135 H 135
+
Sbjct: 354 N 354
>gi|330816973|ref|YP_004360678.1| glycoside hydrolase family protein [Burkholderia gladioli BSR3]
gi|327369366|gb|AEA60722.1| Glycoside hydrolase, family 28 [Burkholderia gladioli BSR3]
Length = 672
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 15/138 (10%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R +VE + +N+L+ N N+P HP C N ++G V++ PN DG DP
Sbjct: 340 YLRPCMVEFIGCTNVLM-ENYHTQNTPFWQHHPTDCTNVVIRG--VMADSIGPNNDGFDP 396
Query: 73 DC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
D +G+ +A+KSG D D P+ N V+ + + G+ +G E
Sbjct: 397 DACRNVLCDGMVFNTGDDCIAIKSGKDLD--TGYGPAQNHVVQNCTMNSGH-GGITLGSE 453
Query: 124 MSGRIFNVTVNHLDVWMQ 141
M G + N+ +L + Q
Sbjct: 454 MGGGVENIYARNLTMLNQ 471
>gi|390567093|ref|ZP_10247442.1| glycoside hydrolase family protein [Burkholderia terrae BS001]
gi|389940941|gb|EIN02721.1| glycoside hydrolase family protein [Burkholderia terrae BS001]
Length = 674
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 15/138 (10%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R +VE + +N+L+ N N+P HP C N ++G+TV S PN DG DP
Sbjct: 342 YLRPCMVEFLGCTNVLM-ENYRTNNTPFWQHHPTDCANVVIRGVTVDS--IGPNNDGFDP 398
Query: 73 DC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
D +G+ +A+KSG D P+ N ++ + + G+ +G E
Sbjct: 399 DACNNVLCDGVTFNTGDDCIAIKSGKALD--TTYGPAQNHVIQNCTMNSGH-GGITLGSE 455
Query: 124 MSGRIFNVTVNHLDVWMQ 141
M G + N+ +L + Q
Sbjct: 456 MGGGVQNIYARNLQMLNQ 473
>gi|148472|gb|AAA03624.1| polygalacturonase [Pectobacterium carotovorum]
Length = 402
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 39/214 (18%)
Query: 3 WDLWWNSTLKHTRGHLVELM--NSSNILIISNLTFCNSPSRTIHPVYCR-NGFVK-GMTV 58
WDL ++ +K + + L+ N S + N++ NSP+ H V+ +GF T+
Sbjct: 161 WDLAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSPN--FHVVFSDGDGFTAWKTTI 218
Query: 59 LSPLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVS 109
+P +A NTDG+DP I +G+ VA+K+ + G + R NI++ +
Sbjct: 219 KTPSTARNTDGIDPMSSKNITIAHSNISTGDDNVAIKA---YKGRSETR---NISI--LH 270
Query: 110 GTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKIS 169
T G+ IG E G ++NVTV+ L + G LR+ D A ++
Sbjct: 271 NEFGTGHGMSIGSETMG-VYNVTVDDLVMTGTTNG-----LRIKS------DKSAAGVVN 318
Query: 170 GISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
G+ + NVV N K P+ +I T +E+ NV
Sbjct: 319 GVRYSNVVMKNVAK-PI---VIDTVYEKKEGSNV 348
>gi|227327233|ref|ZP_03831257.1| endo-polygalacturonase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 402
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 39/214 (18%)
Query: 3 WDLWWNSTLKHTRGHLVELM--NSSNILIISNLTFCNSPSRTIHPVYCR-NGFVK-GMTV 58
WDL ++ +K + + L+ N S + N++ NSP+ H V+ +GF T+
Sbjct: 161 WDLAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSPN--FHVVFSDGDGFTAWKTTI 218
Query: 59 LSPLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVS 109
+P +A NTDG+DP I +G+ VA+K+ + G + R NI++ +
Sbjct: 219 KTPSTARNTDGIDPMSSKNITIAHSNISTGDDNVAIKA---YKGRSETR---NISI--LH 270
Query: 110 GTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKIS 169
T G+ IG E G ++NVTV+ L + G LR+ D A ++
Sbjct: 271 NEFGTGHGMSIGSETMG-VYNVTVDDLIMTGTTNG-----LRIKS------DKSAAGVVN 318
Query: 170 GISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
G+ + NVV N K P+ +I T +E+ NV
Sbjct: 319 GVRYSNVVMKNVAK-PI---VIDTVYEKKEGSNV 348
>gi|189465175|ref|ZP_03013960.1| hypothetical protein BACINT_01520 [Bacteroides intestinalis DSM
17393]
gi|189437449|gb|EDV06434.1| polygalacturonase (pectinase) [Bacteroides intestinalis DSM 17393]
Length = 474
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 14/139 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R H++ L+N +I ++T NS T+H + C + + G+++L+ L N DG+D D
Sbjct: 160 RPHVLTLINIEKT-VIRDVTIRNSAYWTVHLIGCNDASIDGISILNNLKIRNGDGIDVDH 218
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C+IESG+ + +K+ + + +I V + + +C+ + IG E
Sbjct: 219 SKNVRIANCHIESGDDCICLKNRREFEEYG---SCEDIVVTNCTMVSRSCA-IKIGSENM 274
Query: 126 GRIFNVTVNHLDVWMQQQG 144
+I NV N+ + +G
Sbjct: 275 DKINNVLFNNCIIKNSNRG 293
>gi|476012|gb|AAA57139.1| endopolygalacturonase [Pectobacterium carotovorum]
Length = 402
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 39/214 (18%)
Query: 3 WDLWWNSTLKHTRGHLVELM--NSSNILIISNLTFCNSPSRTIHPVYCR-NGFVK-GMTV 58
WDL ++ +K + + L+ N S + N++ NSP+ H V+ +GF T+
Sbjct: 161 WDLAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSPN--FHVVFSDGDGFTAWKTTI 218
Query: 59 LSPLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVS 109
+P +A NTDG+DP I +G+ VA+K+ + G + R NI++ +
Sbjct: 219 KTPSTARNTDGIDPMSSKNITIAHSNISTGDDNVAIKA---YKGRSETR---NISI--LH 270
Query: 110 GTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKIS 169
T G+ IG E G ++NVTV+ L + G LR+ D A ++
Sbjct: 271 NEFGTGHGMSIGSETMG-VYNVTVDDLVMTGTTNG-----LRIKS------DKSAAGVVN 318
Query: 170 GISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
G+ + NVV N K P+ +I T +E+ NV
Sbjct: 319 GVRYSNVVMKNVAK-PI---VIDTVYEKKEGSNV 348
>gi|300789895|ref|YP_003770186.1| endopolygalacturonase [Amycolatopsis mediterranei U32]
gi|384153411|ref|YP_005536227.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
gi|399541775|ref|YP_006554437.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
gi|299799409|gb|ADJ49784.1| endopolygalacturonase [Amycolatopsis mediterranei U32]
gi|340531565|gb|AEK46770.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
gi|398322545|gb|AFO81492.1| endopolygalacturonase [Amycolatopsis mediterranei S699]
Length = 457
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 13 HT-RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD 71
HT R VE N+LI +T NS +HP CRN V G++ + NTDG D
Sbjct: 204 HTMRSAFVEPYACENVLI-QGITLKNSMFWQLHPTLCRNVTVDGVSTDPSTAHSNTDGCD 262
Query: 72 PD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAV 105
P+ C + + + +A+KSG D DG + P N+ V
Sbjct: 263 PESCDHVVIANCTLGAHDDNIAIKSGRDADGRRVNVPCQNLVV 305
>gi|129933|sp|P18192.1|PGLR1_PECCC RecName: Full=Endo-polygalacturonase; Flags: Precursor
gi|42330|emb|CAA37119.1| precursor protein (AA -26 to 376) [Pectobacterium carotovorum]
Length = 402
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 39/214 (18%)
Query: 3 WDLWWNSTLKHTRGHLVELM--NSSNILIISNLTFCNSPSRTIHPVYCR-NGFVK-GMTV 58
WDL ++ +K + + L+ N S + N++ NSP+ H V+ +GF T+
Sbjct: 161 WDLAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSPN--FHVVFSDGDGFTAWKTTI 218
Query: 59 LSPLSAPNTDGLDP---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVS 109
+P +A NTDG+DP I +G+ VA+K+ + G + R NI++ +
Sbjct: 219 KTPSTARNTDGIDPMSSKNITIAHSNISTGDDNVAIKA---YKGRSETR---NISI--LH 270
Query: 110 GTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKIS 169
T G+ IG E G ++NVTV+ L + G LR+ D A ++
Sbjct: 271 NEFGTGHGMSIGSETMG-VYNVTVDDLIMTGTTNG-----LRIKS------DKSAAGVVN 318
Query: 170 GISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
G+ + NVV N K P+ +I T +E+ NV
Sbjct: 319 GVRYSNVVMKNVAK-PI---VIDTVYEKKEGSNV 348
>gi|293571115|ref|ZP_06682155.1| glycoside hydrolase, family 28 [Enterococcus faecium E980]
gi|430842918|ref|ZP_19460825.1| glycosyl hydrolase [Enterococcus faecium E1007]
gi|431064175|ref|ZP_19493522.1| glycosyl hydrolase [Enterococcus faecium E1604]
gi|431130293|ref|ZP_19498935.1| glycosyl hydrolase [Enterococcus faecium E1613]
gi|431739352|ref|ZP_19528287.1| glycosyl hydrolase [Enterococcus faecium E1972]
gi|431742389|ref|ZP_19531282.1| glycosyl hydrolase [Enterococcus faecium E2039]
gi|291608845|gb|EFF38127.1| glycoside hydrolase, family 28 [Enterococcus faecium E980]
gi|430492629|gb|ELA68993.1| glycosyl hydrolase [Enterococcus faecium E1007]
gi|430566194|gb|ELB05313.1| glycosyl hydrolase [Enterococcus faecium E1613]
gi|430568816|gb|ELB07846.1| glycosyl hydrolase [Enterococcus faecium E1604]
gi|430596080|gb|ELB33937.1| glycosyl hydrolase [Enterococcus faecium E1972]
gi|430600147|gb|ELB37805.1| glycosyl hydrolase [Enterococcus faecium E2039]
Length = 443
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Query: 21 LMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD------- 73
L+ + ++I +L F S + Y + V+ + ++ P+TDG+D D
Sbjct: 163 LLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKV-IIRHNDGPSTDGIDIDSSTDVRI 221
Query: 74 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 131
C + G+ +A+KSG D +G + R SS I + R + + GV IG E+S I +V
Sbjct: 222 YECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSEVSAGISDV 279
Query: 132 TVNHLDVWMQQQG 144
++ +D + G
Sbjct: 280 YIHDIDFFQSDCG 292
>gi|257900361|ref|ZP_05680014.1| glycoside hydrolase [Enterococcus faecium Com15]
gi|257838273|gb|EEV63347.1| glycoside hydrolase [Enterococcus faecium Com15]
Length = 412
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Query: 21 LMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD------- 73
L+ + ++I +L F S + Y + V+ + ++ P+TDG+D D
Sbjct: 132 LLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKV-IIRHNDGPSTDGIDIDSSTDVRI 190
Query: 74 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 131
C + G+ +A+KSG D +G + R SS I + R + + GV IG E+S I +V
Sbjct: 191 YECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSEVSAGISDV 248
Query: 132 TVNHLDVWMQQQG 144
++ +D + G
Sbjct: 249 YIHDIDFFQSDCG 261
>gi|420246887|ref|ZP_14750314.1| endopolygalacturonase [Burkholderia sp. BT03]
gi|398073036|gb|EJL64222.1| endopolygalacturonase [Burkholderia sp. BT03]
Length = 674
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 15/138 (10%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R +VE + +N+L+ N N+P HP C N ++G+TV S PN DG DP
Sbjct: 342 YLRPCMVEFLGCTNVLM-ENYRTNNTPFWQHHPTDCANVVIRGVTVDS--IGPNNDGFDP 398
Query: 73 DC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
D +G+ +A+KSG D P+ N ++ + + G+ +G E
Sbjct: 399 DACNNVLCDGVTFNTGDDCIAIKSGKALD--TTYGPAQNHVIQNCTMNSGH-GGITLGSE 455
Query: 124 MSGRIFNVTVNHLDVWMQ 141
M G + N+ +L + Q
Sbjct: 456 MGGGVQNIYARNLQMLNQ 473
>gi|424917510|ref|ZP_18340874.1| endopolygalacturonase [Rhizobium leguminosarum bv. trifolii WSM597]
gi|392853686|gb|EJB06207.1| endopolygalacturonase [Rhizobium leguminosarum bv. trifolii WSM597]
Length = 454
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 11/129 (8%)
Query: 19 VELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDG--LDP---- 72
V + S + + IS L SP T+H V C + V+ +T+ + PNTDG LD
Sbjct: 132 VVVFESCDEVEISALHISRSPMWTLHFVDCTDVAVRNVTIENDRRLPNTDGIVLDACLGA 191
Query: 73 ---DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 129
DC I + + + +K+ G+A+ R NI +RR S + +C+ + IG E G +
Sbjct: 192 VIEDCTISTADDGICLKTSIGPQGVAIGR-CENIVIRRCSVQSLSCA-LKIGTETHGDVT 249
Query: 130 NVTVNHLDV 138
NV V
Sbjct: 250 NVVFEDCSV 258
>gi|427385208|ref|ZP_18881713.1| hypothetical protein HMPREF9447_02746 [Bacteroides oleiciplenus YIT
12058]
gi|425727376|gb|EKU90236.1| hypothetical protein HMPREF9447_02746 [Bacteroides oleiciplenus YIT
12058]
Length = 469
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 68/139 (48%), Gaps = 14/139 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R H++ L+N +I ++T NS T+H + C + + G+++L+ L N DG+D D
Sbjct: 160 RPHVLTLINIEKT-VIRDVTIRNSAYWTVHLIGCNDASIDGISILNDLKIRNGDGIDVDH 218
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C+IESG+ + +K+ + + ++ V + + +C+ + IG E
Sbjct: 219 SKNVRIANCHIESGDDCICLKNRREFEEYG---SCEDVVVTNCTMVSRSCA-IKIGSENM 274
Query: 126 GRIFNVTVNHLDVWMQQQG 144
+I NV N+ + +G
Sbjct: 275 DKINNVLFNNCIIKNSNRG 293
>gi|325679916|ref|ZP_08159485.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
gi|324108354|gb|EGC02601.1| polygalacturonase (pectinase) [Ruminococcus albus 8]
Length = 513
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 22/182 (12%)
Query: 6 WWNSTLKHT--RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLS 63
WW R L+ N ++ + +T N+ S +HP + ++V +P
Sbjct: 204 WWVDVKNQEVPRPRLI-FFNRCKLVTVHGITAQNAASWQLHPYFSTELQFLDLSVNAPKD 262
Query: 64 APNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPT 114
+PNTD LDP+ C G+ +A+KSG G +P++ +R
Sbjct: 263 SPNTDALDPEACDTVNIVGCRFSVGDDCIAIKSGKIEIGRKFKQPANRHTIRNCIMQFGH 322
Query: 115 CSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKISGISFV 174
+ +G EM+G + N++V+ +G LR+ G D I GI F
Sbjct: 323 -GAITLGSEMAGGVKNLSVSRCIFKETDRG-----LRIKTRRGRGKD----AVIDGIEFK 372
Query: 175 NV 176
N+
Sbjct: 373 NI 374
>gi|265754967|ref|ZP_06089881.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
gi|263234578|gb|EEZ20157.1| glycoside hydrolase family 28 [Bacteroides sp. 3_1_33FAA]
Length = 849
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 12/119 (10%)
Query: 22 MNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD-------- 73
+N N+ + +TF I P YC + ++G+TV S TDG+D D
Sbjct: 199 INCKNVFV-EGVTFERGLYWNIVPQYCEHILIRGITVNS-FGHGRTDGIDIDSSNDVLIE 256
Query: 74 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 131
C ++ + +KSG DG+ + RP+SN+ +R+ S G+ G E++G + NV
Sbjct: 257 YCSLDCQDDCYTMKSGRGKDGLKVNRPTSNVVIRK-SIALRGAGGIVCGTEIAGGVRNV 314
>gi|227329691|ref|ZP_03833715.1| putative polygalacturonase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 460
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 13/130 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDC 74
R L+ + +S+N+L+ +T +SPS + Y + V G +LSP APNTD +DP
Sbjct: 170 RPRLIYIKSSNNVLV-DGVTLTHSPSFHVVMRYSHDVDVNGTRILSPWHAPNTDAIDP-- 226
Query: 75 YIESGNGLVA---VKSGWDHDGIAMARPSSNIA------VRRVSGTTPTCSGVGIGREMS 125
I+S N + + DH I +P S + + G+ IG E S
Sbjct: 227 -IDSQNIRITNNYIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANNILKQGRGISIGSETS 285
Query: 126 GRIFNVTVNH 135
G + NV V +
Sbjct: 286 GGVNNVLVEN 295
>gi|212693767|ref|ZP_03301895.1| hypothetical protein BACDOR_03288 [Bacteroides dorei DSM 17855]
gi|423232657|ref|ZP_17219057.1| hypothetical protein HMPREF1063_04877 [Bacteroides dorei
CL02T00C15]
gi|423242091|ref|ZP_17223201.1| hypothetical protein HMPREF1065_03824 [Bacteroides dorei
CL03T12C01]
gi|423247347|ref|ZP_17228397.1| hypothetical protein HMPREF1064_04603 [Bacteroides dorei
CL02T12C06]
gi|212663656|gb|EEB24230.1| polygalacturonase (pectinase) [Bacteroides dorei DSM 17855]
gi|392623750|gb|EIY17852.1| hypothetical protein HMPREF1063_04877 [Bacteroides dorei
CL02T00C15]
gi|392632755|gb|EIY26712.1| hypothetical protein HMPREF1064_04603 [Bacteroides dorei
CL02T12C06]
gi|392639835|gb|EIY33643.1| hypothetical protein HMPREF1065_03824 [Bacteroides dorei
CL03T12C01]
Length = 849
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 12/119 (10%)
Query: 22 MNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD-------- 73
+N N+ + +TF I P YC + ++G+TV S TDG+D D
Sbjct: 199 INCKNVFV-EGVTFERGLYWNIVPQYCEHILIRGITVNS-FGHGRTDGIDIDSSNDVLIE 256
Query: 74 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 131
C ++ + +KSG DG+ + RP+SN+ +R+ S G+ G E++G + NV
Sbjct: 257 YCSLDCQDDCYTMKSGRGKDGLKVNRPTSNVVIRK-SIALRGAGGIVCGTEIAGGVRNV 314
>gi|431753628|ref|ZP_19542297.1| glycosyl hydrolase [Enterococcus faecium E2620]
gi|430611661|gb|ELB48738.1| glycosyl hydrolase [Enterococcus faecium E2620]
Length = 436
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Query: 21 LMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD------- 73
L+ + ++I +L F S + Y + V+ + ++ P+TDG+D D
Sbjct: 156 LLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSSTDVRI 214
Query: 74 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 131
C + G+ +A+KSG D +G + R SS I + R + + GV IG E+S + +V
Sbjct: 215 YECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSEVSAGVSDV 272
Query: 132 TVNHLDVWMQQQG 144
++ +D + G
Sbjct: 273 YIHDIDFFQSDCG 285
>gi|345513296|ref|ZP_08792818.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
gi|229437084|gb|EEO47161.1| glycoside hydrolase [Bacteroides dorei 5_1_36/D4]
Length = 849
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 12/119 (10%)
Query: 22 MNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD-------- 73
+N N+ + +TF I P YC + ++G+TV S TDG+D D
Sbjct: 199 INCKNVFV-EGVTFERGLYWNIVPQYCEHILIRGITVNS-FGHGRTDGIDIDSSNDVLIE 256
Query: 74 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 131
C ++ + +KSG DG+ + RP+SN+ +R+ S G+ G E++G + NV
Sbjct: 257 YCSLDCQDDCYTMKSGRGKDGLKVNRPTSNVVIRK-SIALRGAGGIVCGTEIAGGVRNV 314
>gi|50120034|ref|YP_049201.1| endo-polygalacturonase [Pectobacterium atrosepticum SCRI1043]
gi|49610560|emb|CAG74005.1| endo-polygalacturonase [Pectobacterium atrosepticum SCRI1043]
Length = 402
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 39/214 (18%)
Query: 3 WDLWWNSTLKHTRGHLVELM--NSSNILIISNLTFCNSPSRTIHPVYCR-NGFVK-GMTV 58
W+L ++ +K + + L+ N S + N++ NSP+ H V+ +GF T+
Sbjct: 161 WELAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSPN--FHVVFSDGDGFTAWKTTI 218
Query: 59 LSPLSAPNTDGLDPDCY---------IESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVS 109
+P +A NTDG+DP I +G+ VA+K+ + G A R NI++ +
Sbjct: 219 KTPSTARNTDGIDPMSSKNITIAYSNISTGDDNVAIKA---YKGRAETR---NISI--LH 270
Query: 110 GTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKIS 169
T G+ IG E G ++NVTV+ L + G LR+ D A ++
Sbjct: 271 NDFGTGHGMSIGSETMG-VYNVTVDDLKMNGTTNG-----LRIKS------DKSAAGVVN 318
Query: 170 GISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
G+ + NVV N K P+ +I T +E+ NV
Sbjct: 319 GVRYSNVVMKNVAK-PI---VIDTVYEKKEGSNV 348
>gi|423312659|ref|ZP_17290596.1| hypothetical protein HMPREF1058_01208 [Bacteroides vulgatus
CL09T03C04]
gi|392687393|gb|EIY80686.1| hypothetical protein HMPREF1058_01208 [Bacteroides vulgatus
CL09T03C04]
Length = 849
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 12/122 (9%)
Query: 22 MNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD-------- 73
+N N+ + +TF I P YC + ++G+TV S TDG+D D
Sbjct: 199 INCKNVFV-EGVTFERGLYWNIVPQYCEHIVIRGITVNS-FGHGRTDGIDIDSSNDVLIE 256
Query: 74 -CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVT 132
C ++ + +KSG DG+ + RP+SN+ +R+ S G+ G E++G + NV
Sbjct: 257 YCSLDCQDDCYTMKSGRGEDGLKVNRPTSNVVIRK-SIALRGAGGIVCGTEIAGGVRNVY 315
Query: 133 VN 134
++
Sbjct: 316 MH 317
>gi|431758794|ref|ZP_19547417.1| glycosyl hydrolase [Enterococcus faecium E3083]
gi|430616609|gb|ELB53505.1| glycosyl hydrolase [Enterococcus faecium E3083]
Length = 436
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Query: 21 LMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD------- 73
L+ + ++I +L F S + Y + V+ + ++ P+TDG+D D
Sbjct: 156 LLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSSTDVRI 214
Query: 74 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 131
C + G+ +A+KSG D +G + R SS I + R + + GV IG E+S + +V
Sbjct: 215 YECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSEVSAGVSDV 272
Query: 132 TVNHLDVWMQQQG 144
++ +D + G
Sbjct: 273 YIHDIDFFQSDCG 285
>gi|293379024|ref|ZP_06625177.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
gi|292642303|gb|EFF60460.1| polygalacturonase (pectinase) [Enterococcus faecium PC4.1]
Length = 436
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Query: 21 LMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD------- 73
L+ + ++I +L F S + Y + V+ + ++ P+TDG+D D
Sbjct: 156 LLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSSTDVRI 214
Query: 74 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 131
C + G+ +A+KSG D +G + R SS I + R + + GV IG E+S + +V
Sbjct: 215 YECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSEVSAGVSDV 272
Query: 132 TVNHLDVWMQQQG 144
++ +D + G
Sbjct: 273 YIHDIDFFQSDCG 285
>gi|270157085|ref|ZP_06185742.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|289164503|ref|YP_003454641.1| glycoside hydrolase family 28 protein / polygalacturonase
[Legionella longbeachae NSW150]
gi|269989110|gb|EEZ95364.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|288857676|emb|CBJ11519.1| glycoside hydrolase family 28 protein / polygalacturonase family
protein [Legionella longbeachae NSW150]
Length = 397
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 82/180 (45%), Gaps = 23/180 (12%)
Query: 6 WWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAP 65
WWN + R LVE+ N+S I + + NSP +H V N + + + +P +P
Sbjct: 140 WWNQV--NDRPVLVEINNTSGI-TVQFIELINSPKYNLHIVSSDNININNIAINAPADSP 196
Query: 66 NTDGLDPDCYIESGNGLVAVKSGWDHDGIAMAR---PSSNIAVRRVSGTTPTCSGVGIGR 122
NTDG++ + V +G DGIA+ PSS I + V T G+ IG
Sbjct: 197 NTDGVNTHNISNMSIDTITVNNG--DDGIAVNSDQGPSSAIRINNV--TLINGHGLSIGS 252
Query: 123 EMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGH-PKEGWDPKAIPK-----ISGISFVNV 176
++ +F++TVN + G LR+ P E DP P+ +S IS+ N+
Sbjct: 253 QVYNPVFDMTVNKVSFKNSSHG-----LRIKTRCPSE--DPSKCPQTKTGSVSNISYENI 305
>gi|424764550|ref|ZP_18191970.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|431050708|ref|ZP_19493377.1| glycosyl hydrolase [Enterococcus faecium E1590]
gi|431764023|ref|ZP_19552569.1| glycosyl hydrolase [Enterococcus faecium E3548]
gi|402419033|gb|EJV51317.1| polygalacturonase [Enterococcus faecium TX1337RF]
gi|430560246|gb|ELA99550.1| glycosyl hydrolase [Enterococcus faecium E1590]
gi|430621327|gb|ELB58094.1| glycosyl hydrolase [Enterococcus faecium E3548]
Length = 436
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Query: 21 LMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD------- 73
L+ + ++I +L F S + Y + V+ + ++ P+TDG+D D
Sbjct: 156 LLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSSTDVRI 214
Query: 74 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 131
C + G+ +A+KSG D +G + R SS I + R + + GV IG E+S + +V
Sbjct: 215 YECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSEVSAGVSDV 272
Query: 132 TVNHLDVWMQQQG 144
++ +D + G
Sbjct: 273 YIHDIDFFQSDCG 285
>gi|227550317|ref|ZP_03980366.1| pectin lyase [Enterococcus faecium TX1330]
gi|227180577|gb|EEI61549.1| pectin lyase [Enterococcus faecium TX1330]
Length = 436
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Query: 21 LMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD------- 73
L+ + ++I +L F S + Y + V+ + ++ P+TDG+D D
Sbjct: 156 LLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSSTDVRI 214
Query: 74 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 131
C + G+ +A+KSG D +G + R SS I + R + + GV IG E+S + +V
Sbjct: 215 YECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSEVSAGVSDV 272
Query: 132 TVNHLDVWMQQQG 144
++ +D + G
Sbjct: 273 YIHDIDFFQSDCG 285
>gi|421082988|ref|ZP_15543867.1| Peh-1 [Pectobacterium wasabiae CFBP 3304]
gi|401702214|gb|EJS92458.1| Peh-1 [Pectobacterium wasabiae CFBP 3304]
Length = 402
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 39/214 (18%)
Query: 3 WDLWWNSTLKHTRGHLVELM--NSSNILIISNLTFCNSPSRTIHPVYCR-NGFVK-GMTV 58
W+L ++ +K + + L+ N S + N++ NSP+ H V+ +GF T+
Sbjct: 161 WELAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSPN--FHVVFSDGDGFTAWKTTI 218
Query: 59 LSPLSAPNTDGLDPDCY---------IESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVS 109
+P +A NTDG+DP I +G+ VA+K+ + G A R NI++ +
Sbjct: 219 KTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKA---YKGRAETR---NISI--LH 270
Query: 110 GTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKIS 169
T G+ IG E G ++NVTV+ L + G LR+ D A ++
Sbjct: 271 NDFGTGHGMSIGSETMG-VYNVTVDDLKMNGTTNG-----LRIKS------DKSAAGVVN 318
Query: 170 GISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
G+ + NVV N K P+ +I T +E+ NV
Sbjct: 319 GVRYSNVVMKNVAK-PI---VIDTVYEKKEGSNV 348
>gi|257889043|ref|ZP_05668696.1| glycoside hydrolase [Enterococcus faecium 1,141,733]
gi|257825106|gb|EEV52029.1| glycoside hydrolase [Enterococcus faecium 1,141,733]
Length = 412
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Query: 21 LMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD------- 73
L+ + ++I +L F S + Y + V+ + ++ P+TDG+D D
Sbjct: 132 LLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSSTDVRI 190
Query: 74 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 131
C + G+ +A+KSG D +G + R SS I + R + + GV IG E+S + +V
Sbjct: 191 YECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSEVSAGVSDV 248
Query: 132 TVNHLDVWMQQQG 144
++ +D + G
Sbjct: 249 YIHDIDFFQSDCG 261
>gi|302672206|ref|YP_003832166.1| polygalacturonase Pgl28B [Butyrivibrio proteoclasticus B316]
gi|302396679|gb|ADL35584.1| polygalacturonase Pgl28B [Butyrivibrio proteoclasticus B316]
Length = 519
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 59/128 (46%), Gaps = 13/128 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
RG L+ + N NI I LT +PS IH +Y + V L N DG DPD
Sbjct: 255 RGRLINMSNCQNIWI-HGLTLGFAPSWNIHFIY-SDQIVTDHCTLKSEGVWNGDGWDPDS 312
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C + + VA+KSG + +G + RP+ +I R T G+ IG EMS
Sbjct: 313 STNSTLYACDFYTEDDSVAIKSGKNPEGNVINRPTKHI--RVFDSVTHFGHGLCIGSEMS 370
Query: 126 GRIFNVTV 133
G + +V +
Sbjct: 371 GGVEDVRL 378
>gi|257897638|ref|ZP_05677291.1| glycoside hydrolase [Enterococcus faecium Com12]
gi|257834203|gb|EEV60624.1| glycoside hydrolase [Enterococcus faecium Com12]
Length = 412
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Query: 21 LMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD------- 73
L+ + ++I +L F S + Y + V+ + ++ P+TDG+D D
Sbjct: 132 LLYHAEHVVIRDLIFQKSGFWNLQITYSNDVLVEKI-IIRHNDGPSTDGIDIDSSTDVRI 190
Query: 74 --CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNV 131
C + G+ +A+KSG D +G + R SS I + R + + GV IG E+S + +V
Sbjct: 191 YECDLACGDDCIAIKSGRDGNGARVNRKSSRIEIARCN--IRSGYGVTIGSEVSAGVSDV 248
Query: 132 TVNHLDVWMQQQG 144
++ +D + G
Sbjct: 249 YIHDIDFFQSDCG 261
>gi|241113419|ref|YP_002973254.1| Parallel beta-helix repeat-containing protein [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240861627|gb|ACS59293.1| Parallel beta-helix repeat protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 454
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 11/118 (9%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDG--LDP-------DCYIESGN 80
IS++ C SP T+H V C + V+ + + + PNTDG LD DC I + +
Sbjct: 143 ISSVHICRSPMWTLHFVNCTDVAVRNVIIDNDRRLPNTDGIVLDACRGAVIEDCRISTAD 202
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNHLDV 138
+ +K+ D +A+ R NI VRR S + +C+ + IG E G + NV V
Sbjct: 203 DGICLKTSIGPDRVAIGR-CENILVRRCSVQSLSCA-LKIGTETHGDVTNVVFEDCSV 258
>gi|261822561|ref|YP_003260667.1| glycoside hydrolase family protein [Pectobacterium wasabiae WPP163]
gi|129936|sp|P26509.1|PGLR2_PECCC RecName: Full=Endo-polygalacturonase; Flags: Precursor
gi|42334|emb|CAA35998.1| endopolygalacturonase [Pectobacterium carotovorum]
gi|261606574|gb|ACX89060.1| glycoside hydrolase family 28 [Pectobacterium wasabiae WPP163]
gi|385872872|gb|AFI91392.1| Polygalacturonase [Pectobacterium sp. SCC3193]
Length = 402
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 39/214 (18%)
Query: 3 WDLWWNSTLKHTRGHLVELM--NSSNILIISNLTFCNSPSRTIHPVYCR-NGFVK-GMTV 58
W+L ++ +K + + L+ N S + N++ NSP+ H V+ +GF T+
Sbjct: 161 WELAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSPN--FHVVFSDGDGFTAWKTTI 218
Query: 59 LSPLSAPNTDGLDPDCY---------IESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVS 109
+P +A NTDG+DP I +G+ VA+K+ + G A R NI++ +
Sbjct: 219 KTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKA---YKGRAETR---NISI--LH 270
Query: 110 GTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKIS 169
T G+ IG E G ++NVTV+ L + G LR+ D A ++
Sbjct: 271 NDFGTGHGMSIGSETMG-VYNVTVDDLKMNGTTNG-----LRIKS------DKSAAGVVN 318
Query: 170 GISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
G+ + NVV N K P+ +I T +E+ NV
Sbjct: 319 GVRYSNVVMKNVAK-PI---VIDTVYEKKEGSNV 348
>gi|139438280|ref|ZP_01771833.1| Hypothetical protein COLAER_00822 [Collinsella aerofaciens ATCC
25986]
gi|133776477|gb|EBA40297.1| polygalacturonase (pectinase) [Collinsella aerofaciens ATCC 25986]
Length = 531
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 20/104 (19%)
Query: 4 DLWWNSTLKH----------TRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFV 53
D WWN K+ R ++ L N+ + + T NSP+ IHPV C +
Sbjct: 213 DNWWNKDFKNIFRPEEGREVARPRMIFLSECQNVSL-AGFTVRNSPAWNIHPVLCEHVDA 271
Query: 54 KGMTVLSPLSAPNTDGLDPD---------CYIESGNGLVAVKSG 88
+++ P ++ NTDG DP+ C G+ +A+KSG
Sbjct: 272 LCLSIEGPKNSHNTDGFDPESCGFVRILGCQFSVGDDCIAIKSG 315
>gi|157830315|pdb|1BHE|A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora
Length = 376
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 39/214 (18%)
Query: 3 WDLWWNSTLKHTRGHLVELM--NSSNILIISNLTFCNSPSRTIHPVYCR-NGFVK-GMTV 58
W+L ++ +K + + L+ N S + N++ NSP+ H V+ +GF T+
Sbjct: 135 WELAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSPN--FHVVFSDGDGFTAWKTTI 192
Query: 59 LSPLSAPNTDGLDPDCY---------IESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVS 109
+P +A NTDG+DP I +G+ VA+K+ + G A R NI++ +
Sbjct: 193 KTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKA---YKGRAETR---NISI--LH 244
Query: 110 GTTPTCSGVGIGREMSGRIFNVTVNHLDVWMQQQGSYKDRLRLYGHPKEGWDPKAIPKIS 169
T G+ IG E G ++NVTV+ L + G LR+ D A ++
Sbjct: 245 NDFGTGHGMSIGSETMG-VYNVTVDDLKMNGTTNG-----LRIKS------DKSAAGVVN 292
Query: 170 GISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNV 203
G+ + NVV N K P+ +I T +E+ NV
Sbjct: 293 GVRYSNVVMKNVAK-PI---VIDTVYEKKEGSNV 322
>gi|421725056|ref|ZP_16164257.1| glycoside hydrolase [Klebsiella oxytoca M5al]
gi|410374138|gb|EKP28818.1| glycoside hydrolase [Klebsiella oxytoca M5al]
Length = 460
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 21/134 (15%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP-- 72
R L+ + +SN+LI +T +SPS + Y + + G +LSP APNTD +DP
Sbjct: 170 RPRLIYITRASNVLI-DGVTLTHSPSFHVVTRYAHDVDINGTRILSPWHAPNTDAIDPID 228
Query: 73 -------DCYIESGNGLVAVKSGWDH----DGIAMARPSSNIAVRRVSGTTPTCSGVGIG 121
+ YI+ + +A+K+ DG+ NI + + T G+ IG
Sbjct: 229 SQNIRITNNYIDCNDDHIAIKAEKADPRFPDGVV-----DNIYI--ANNTLKQGRGISIG 281
Query: 122 REMSGRIFNVTVNH 135
E +G + NV V +
Sbjct: 282 SESAGGVNNVRVEN 295
>gi|29349557|ref|NP_813060.1| exo-poly-alpha-D-galacturonosidase, partial [Bacteroides
thetaiotaomicron VPI-5482]
gi|29341467|gb|AAO79254.1| exo-poly-alpha-D-galacturonosidase precursor [Bacteroides
thetaiotaomicron VPI-5482]
Length = 352
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 23/145 (15%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+RW + ++ K RG LVE S+ + +S T + +Y + G+T+ +
Sbjct: 187 LRWIVDYD--CKRVRGILVE---RSSDITLSGFTLMRTGFWGCQILYSDYCTIDGLTINN 241
Query: 61 PLSA--PNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVS 109
+ P+TDG+D D C ++ + + +KSG D DG+ + RP+ N+ VR +
Sbjct: 242 NIGGHGPSTDGIDIDSSCNILIENCDVDCNDDNICIKSGRDADGLRVNRPTENVVVRNCT 301
Query: 110 GTTPTCSGVGI---GREMSGRIFNV 131
G G+ G E SG I NV
Sbjct: 302 AR----KGAGLITCGSETSGSIRNV 322
>gi|116619801|ref|YP_821957.1| glycoside hydrolase family protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222963|gb|ABJ81672.1| glycoside hydrolase, family 28 [Candidatus Solibacter usitatus
Ellin6076]
Length = 528
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 22/141 (15%)
Query: 18 LVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD------ 71
+ LM S N+LI + S I VY N V G+ V + +T G+
Sbjct: 177 FISLMESKNVLI-QGIHIVGSAMWPIQLVYDDNAVVSGVMVET-FGGHDTGGIYVDSSRN 234
Query: 72 ---PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIA-----VRRVSGTTPTCSGVGIGRE 123
DCYI++G+ + +KSG D DG + RP+ NI+ V R G V +G E
Sbjct: 235 VRISDCYIDTGDDGIVIKSGKDADGRRVNRPAENISITNCNVHRAHGA------VVLGSE 288
Query: 124 MSGRIFNVTVNHLDVWMQQQG 144
+SG I N+ +++ Q G
Sbjct: 289 ISGWIRNLVASNITCDGTQMG 309
>gi|298383805|ref|ZP_06993366.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
gi|298263409|gb|EFI06272.1| exo-poly-alpha-D-galacturonosidase [Bacteroides sp. 1_1_14]
Length = 506
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 23/145 (15%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+RW + ++ K RG LVE S+ + +S T + +Y + G+T+ +
Sbjct: 187 LRWIVDYD--CKRVRGILVE---RSSDITLSGFTLMRTGFWGCQILYSDYCTIDGLTINN 241
Query: 61 PLSA--PNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVS 109
+ P+TDG+D D C ++ + + +KSG D DG+ + RP+ N+ VR +
Sbjct: 242 NIGGHGPSTDGIDIDSSCNILIENCDVDCNDDNICIKSGRDADGLRVNRPTENVVVRNCT 301
Query: 110 GTTPTCSGVGI---GREMSGRIFNV 131
G G+ G E SG I NV
Sbjct: 302 AR----KGAGLITCGSETSGSIRNV 322
>gi|322437527|ref|YP_004219617.1| glycoside hydrolase family protein [Granulicella tundricola
MP5ACTX9]
gi|321165420|gb|ADW71123.1| glycoside hydrolase family 28 [Granulicella tundricola MP5ACTX9]
Length = 467
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 11/102 (10%)
Query: 42 TIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYIESGNGLVAVKSGWDHD 92
+IHP C N + +TV S L+ N DG+D D C I SG+ +++KSG +
Sbjct: 200 SIHPTCCDNLVFRNLTVRSTLT--NGDGIDIDSCRHVLIDTCDIASGDDCISLKSGRGEE 257
Query: 93 GIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVN 134
+ARP+ ++ + + + +GIG E S I V +
Sbjct: 258 AYQLARPTEDVRIVNCTLEGRGFACIGIGSETSAGIRRVLIE 299
>gi|423301868|ref|ZP_17279891.1| hypothetical protein HMPREF1057_03032 [Bacteroides finegoldii
CL09T03C10]
gi|408470959|gb|EKJ89491.1| hypothetical protein HMPREF1057_03032 [Bacteroides finegoldii
CL09T03C10]
Length = 752
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 13/133 (9%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD--- 71
R HL+ NI + SP TIH C G V+ + V + N DG+D
Sbjct: 496 RPHLIHFNRCKNIQL-EGFRIRESPFWTIHIYMCDGGVVRNLDVRA--HGHNNDGIDFEM 552
Query: 72 ------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
+C + G+ V +K+G + D + P NI +R + +GIG E+S
Sbjct: 553 SKNFLVENCSFDQGDDAVVIKAGRNQDAWRLNTPCENIVIRNCQ-ILKGHTLLGIGSEIS 611
Query: 126 GRIFNVTVNHLDV 138
G I N+ ++ V
Sbjct: 612 GGIRNIYMHDCTV 624
>gi|413961867|ref|ZP_11401095.1| glycoside hydrolase family protein [Burkholderia sp. SJ98]
gi|413930739|gb|EKS70026.1| glycoside hydrolase family protein [Burkholderia sp. SJ98]
Length = 664
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 15/135 (11%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R +VE + +N+L+ S T N+P HP CRN ++ +TV S PN DG DP
Sbjct: 332 YLRPCMVEFIGCTNVLMESYRTN-NTPFWQHHPTDCRNVVMRSVTVDS--IGPNNDGFDP 388
Query: 73 DC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
D +G+ +A+KSG D D P+ N ++ + + G+ +G E
Sbjct: 389 DACDTVLCENVTFNTGDDCIAIKSGKDLD--TQYGPAQNHVIQNCTMNS-GHGGITLGSE 445
Query: 124 MSGRIFNVTVNHLDV 138
M G + + +L +
Sbjct: 446 MGGGVQKIYARNLQM 460
>gi|86361024|ref|YP_472911.1| polygalacturonase [Rhizobium etli CFN 42]
gi|86285126|gb|ABC94184.1| probable polygalacturonase protein [Rhizobium etli CFN 42]
Length = 454
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 11/122 (9%)
Query: 19 VELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDG--LDP---- 72
V ++ + + IS++T SP T+H V C + V+ +T+ + PNTDG LD
Sbjct: 132 VVVLEGCDEVEISSVTISRSPMWTLHFVNCTDVAVRSVTIENDRRLPNTDGIVLDACRGA 191
Query: 73 ---DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 129
DC I + + + +K+ +G+A+ R NI VRR + +C+ + IG E G +
Sbjct: 192 VIEDCNISTADDGICLKTSIGPEGVAIGR-CENILVRRCFVQSLSCA-LKIGTETHGDVT 249
Query: 130 NV 131
NV
Sbjct: 250 NV 251
>gi|423112756|ref|ZP_17100447.1| hypothetical protein HMPREF9689_00504 [Klebsiella oxytoca 10-5245]
gi|376390250|gb|EHT02936.1| hypothetical protein HMPREF9689_00504 [Klebsiella oxytoca 10-5245]
Length = 460
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 21/134 (15%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP-- 72
R L+ + +SN+LI +T +SPS + Y + + G +LSP APNTD +DP
Sbjct: 170 RPRLIYITRASNVLI-DGVTLTHSPSFHVVTRYAHDVDINGTRILSPWHAPNTDAIDPID 228
Query: 73 -------DCYIESGNGLVAVKSGWDH----DGIAMARPSSNIAVRRVSGTTPTCSGVGIG 121
+ YI+ + +A+K+ DG+ NI + + T G+ IG
Sbjct: 229 SQNIRITNNYIDCNDDHIAIKAEKADPRFPDGVV-----DNIYI--ANNTLKQGRGISIG 281
Query: 122 REMSGRIFNVTVNH 135
E +G + NV V +
Sbjct: 282 SESAGGVNNVLVEN 295
>gi|225872229|ref|YP_002753684.1| glycosyl hydrolase, family 28 [Acidobacterium capsulatum ATCC
51196]
gi|225792218|gb|ACO32308.1| glycosyl hydrolase, family 28 [Acidobacterium capsulatum ATCC
51196]
Length = 468
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Query: 5 LWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSA 64
L W + R L+E S ++ + + L SP T+H Y V G+T+ + +
Sbjct: 159 LRWAADYDDRRPRLIEFYQSQHVSL-AGLHLLRSPFWTVHICYSAYVHVDGITIRNNIGG 217
Query: 65 --PNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTP 113
P+TDG+D D I + + +K+G D DG+ + +P +I +R +
Sbjct: 218 RGPSTDGVDIDSSRHVLVEHADISVNDDALCLKAGRDSDGLRVNKPDVDIVIRNCT-VRY 276
Query: 114 TCSGVGIGREMSGRIFNVTV 133
+ IG E SG NV V
Sbjct: 277 GAAAFTIGSETSGGFRNVDV 296
>gi|383120489|ref|ZP_09941217.1| parallel beta-helix [Bacteroides sp. 1_1_6]
gi|251840459|gb|EES68541.1| parallel beta-helix [Bacteroides sp. 1_1_6]
Length = 506
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 23/145 (15%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+RW + ++ K RG LVE S+ + +S T + +Y + G+T+ +
Sbjct: 187 LRWIVDYDC--KRVRGILVE---RSSDITLSGFTLMRTGFWGCQILYSDYCTIDGLTINN 241
Query: 61 PLSA--PNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVS 109
+ P+TDG+D D C ++ + + +KSG D DG+ + RP+ N+ VR +
Sbjct: 242 NIGGHGPSTDGIDIDSSCNILIENCDVDCNDDNICIKSGRDADGLRVNRPTENVVVRNCT 301
Query: 110 GTTPTCSGVGI---GREMSGRIFNV 131
G G+ G E SG I NV
Sbjct: 302 AR----KGAGLITCGSETSGSIRNV 322
>gi|423106873|ref|ZP_17094568.1| hypothetical protein HMPREF9687_00119 [Klebsiella oxytoca 10-5243]
gi|376388999|gb|EHT01691.1| hypothetical protein HMPREF9687_00119 [Klebsiella oxytoca 10-5243]
Length = 460
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 21/134 (15%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP-- 72
R L+ + +SN+LI +T +SPS + Y + + G +LSP APNTD +DP
Sbjct: 170 RPRLIYITRASNVLI-DGVTLTHSPSFHVVTRYAHDVDINGTRILSPWHAPNTDAIDPID 228
Query: 73 -------DCYIESGNGLVAVKSGWDH----DGIAMARPSSNIAVRRVSGTTPTCSGVGIG 121
+ YI+ + +A+K+ DG+ NI + + T G+ IG
Sbjct: 229 SQNIRITNNYIDCNDDHIAIKAEKADPRFPDGVV-----DNIYI--ANNTLKQGRGISIG 281
Query: 122 REMSGRIFNVTVNH 135
E +G + NV V +
Sbjct: 282 SESAGGVNNVLVEN 295
>gi|420244676|ref|ZP_14748420.1| endopolygalacturonase [Rhizobium sp. CF080]
gi|398052527|gb|EJL44786.1| endopolygalacturonase [Rhizobium sp. CF080]
Length = 444
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 55/124 (44%), Gaps = 11/124 (8%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGL---------DPDCYIESGN 80
I L +SP T+H V C N +V G+ V + PNTDGL DC I + +
Sbjct: 143 IERLEIMDSPMWTLHLVNCDNVYVAGVKVSNNQRMPNTDGLVLDACRHAVVEDCIISTAD 202
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNHLDVWM 140
+ +K+ DG A+ N+ VRR + +C+ + IG E G NV V
Sbjct: 203 DGICLKTSAGPDGRAIGE-CENVRVRRCLVESKSCA-LKIGTESYGDFTNVVFEDCRVHD 260
Query: 141 QQQG 144
+G
Sbjct: 261 SNRG 264
>gi|242238419|ref|YP_002986600.1| glycoside hydrolase family protein [Dickeya dadantii Ech703]
gi|242130476|gb|ACS84778.1| glycoside hydrolase family 28 [Dickeya dadantii Ech703]
Length = 448
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 12/143 (8%)
Query: 11 LKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGL 70
L H+ + + + + ++T SP T+H V C F+ + V + L+ NTD L
Sbjct: 126 LPHSHRPRMVVFEDCQAIRLQDITLTQSPMWTVHLVSCAQVFIARICVDNDLTMANTDAL 185
Query: 71 D---------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIG 121
D DC+ + + + +K+ I RP N+ V + + +C+ + IG
Sbjct: 186 DIDSCQQVHISDCHFSAADDGICLKTTRKTPQI--QRPLRNVTVTNCTLRSKSCA-IKIG 242
Query: 122 REMSGRIFNVTVNHLDVWMQQQG 144
E I NVT+++ ++ +G
Sbjct: 243 TETFADIENVTISNCSIYESNRG 265
>gi|380693875|ref|ZP_09858734.1| exo-poly-alpha-D-galacturonosidase [Bacteroides faecis MAJ27]
Length = 506
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 23/145 (15%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+RW + ++ K RG LVE S+ + +S T + +Y + G+T+ +
Sbjct: 187 LRWIVDYD--CKRVRGILVE---RSSDITLSGFTLMRTGFWGCQILYSDYCTIDGLTINN 241
Query: 61 PLSA--PNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVS 109
+ P+TDG+D D C ++ + + +KSG D DG+ + RP+ N+ VR +
Sbjct: 242 NIGGHGPSTDGIDIDSSCNILIENCDVDCNDDNICIKSGRDADGLRVNRPTENVVVRNCT 301
Query: 110 GTTPTCSGVGI---GREMSGRIFNV 131
G G+ G E SG I N+
Sbjct: 302 AR----KGAGLITCGSETSGSIRNI 322
>gi|383115308|ref|ZP_09936066.1| hypothetical protein BSGG_2810 [Bacteroides sp. D2]
gi|313695275|gb|EFS32110.1| hypothetical protein BSGG_2810 [Bacteroides sp. D2]
Length = 496
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 23/145 (15%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+RW + ++ K RG LVE S + + + T + +Y + G+T+ +
Sbjct: 186 LRWAVDYDC--KRVRGILVE---RSTDVTLKDFTLMRTGFWACQILYSDYCSINGLTINN 240
Query: 61 PLSA--PNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVS 109
+ P+TDG+D D C I+ + + +KSG D DG+ + RP+ N+ +R +
Sbjct: 241 NIGGRGPSTDGVDIDSSTNILIENCMIDCNDDNICLKSGRDTDGLRVNRPTENVVIRNCT 300
Query: 110 GTTPTCSGVGI---GREMSGRIFNV 131
T G G+ G E SG I N+
Sbjct: 301 ----TRKGAGLITCGSETSGGIRNI 321
>gi|307129970|ref|YP_003881986.1| Exo-poly-alpha-D-galacturonosidase [Dickeya dadantii 3937]
gi|306527499|gb|ADM97429.1| Exo-poly-alpha-D-galacturonosidase [Dickeya dadantii 3937]
Length = 467
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 12/120 (10%)
Query: 25 SNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDCYIESGNGLVA 84
SN ++I +T NSPS + Y + V G +++P APNTD +DP I+S N +
Sbjct: 186 SNRVLIDGVTLTNSPSFHVVMRYAHDVTVNGTHIIAPWHAPNTDAIDP---IDSQNIRIT 242
Query: 85 ---VKSGWDHDGIAMARPSSNIA------VRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
+ DH I +P S + + G+ IG E SG + NV V +
Sbjct: 243 NNVIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANNVLKQGRGISIGSETSGGVNNVLVEN 302
>gi|345300045|ref|YP_004829403.1| glycoside hydrolase family protein [Enterobacter asburiae LF7a]
gi|345093982|gb|AEN65618.1| glycoside hydrolase family 28 [Enterobacter asburiae LF7a]
Length = 441
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 12/140 (8%)
Query: 14 TRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD-- 71
TR + + S + ISN+T +SP T H V C + F++ +T+ + L+ NTD LD
Sbjct: 129 TRRPRLVVFESCEQVRISNITLYDSPMWTAHLVSCNHVFIRNLTIDNDLALSNTDALDID 188
Query: 72 -------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREM 124
D Y + + + +K+ + +P N+ V + +C+ + +G E
Sbjct: 189 SCQHVHISDSYFSAADDGICLKTTA--KAPELQQPVYNVTVNNCIIRSKSCA-IKVGTET 245
Query: 125 SGRIFNVTVNHLDVWMQQQG 144
I N+ VN+ ++ +G
Sbjct: 246 HADIRNIAVNNCVIFESNRG 265
>gi|224537469|ref|ZP_03678008.1| hypothetical protein BACCELL_02348 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520907|gb|EEF90012.1| hypothetical protein BACCELL_02348 [Bacteroides cellulosilyticus
DSM 14838]
Length = 469
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 14/139 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R H++ L+N +I ++T NS T+H + C + + G+++L+ L N DG+D D
Sbjct: 160 RPHVLTLINIEKT-VIRDVTIRNSAYWTVHLIGCNDVSIDGISILNNLKIRNGDGIDVDH 218
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C+IESG+ + +K+ + + +I V + + +C+ + IG E
Sbjct: 219 SKNVRIANCHIESGDDCICLKNRREFEEYG---SCEDIVVTNCTMVSRSCA-IKIGSENM 274
Query: 126 GRIFNVTVNHLDVWMQQQG 144
+I NV N+ + +G
Sbjct: 275 DKINNVLFNNCIIKNSNRG 293
>gi|423226738|ref|ZP_17213203.1| hypothetical protein HMPREF1062_05389 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392627011|gb|EIY21052.1| hypothetical protein HMPREF1062_05389 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 469
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 14/139 (10%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD- 73
R H++ L+N +I ++T NS T+H + C + + G+++L+ L N DG+D D
Sbjct: 160 RPHVLTLINIEKT-VIRDVTIRNSAYWTVHLIGCNDVSIDGISILNNLKIRNGDGIDVDH 218
Query: 74 --------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMS 125
C+IESG+ + +K+ + + +I V + + +C+ + IG E
Sbjct: 219 SKNVRIANCHIESGDDCICLKNRREFEEYG---SCEDIVVTNCTMVSRSCA-IKIGSENM 274
Query: 126 GRIFNVTVNHLDVWMQQQG 144
+I NV N+ + +G
Sbjct: 275 DKINNVLFNNCIIKNSNRG 293
>gi|20451636|emb|CAC83614.1| putative polygalacturonase [Erwinia chrysanthemi]
Length = 457
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 12/120 (10%)
Query: 25 SNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPDCYIESGNGLVA 84
SN ++I +T NSPS + Y + V G +++P APNTD +DP I+S N +
Sbjct: 176 SNRVLIDGVTLTNSPSFHVVMRYAHDVTVNGTHIIAPWHAPNTDAIDP---IDSQNIRIT 232
Query: 85 ---VKSGWDHDGIAMARPSSNIA------VRRVSGTTPTCSGVGIGREMSGRIFNVTVNH 135
+ DH I +P S + + G+ IG E SG + NV V +
Sbjct: 233 NNVIDCNDDHIAIKAEKPDSRFPNGVVDNIYIANNVLKQGRGISIGSETSGGVNNVLVEN 292
>gi|392950252|ref|ZP_10315809.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
gi|392434534|gb|EIW12501.1| endopolygalacturonase, glycosyl hydrolases family 28 [Lactobacillus
pentosus KCA1]
Length = 438
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 12/116 (10%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYIESGN 80
IS+LT S YC+ V +TV + P+TDG+D D C + G+
Sbjct: 167 ISDLTLMRSGFWNCQLTYCQQMEVSHLTVKEN-NGPSTDGIDIDSSSYVRVHNCELSCGD 225
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNHL 136
+ VKSG D DG+ + +P+++I + + GV +G E+S I +V ++ +
Sbjct: 226 DCIVVKSGRDGDGLRVNQPAAHIEIDHC--IIHSGYGVTLGSEVSAGISDVHIHDM 279
>gi|417107200|ref|ZP_11962432.1| putative polygalacturonase protein [Rhizobium etli CNPAF512]
gi|327189815|gb|EGE56955.1| putative polygalacturonase protein [Rhizobium etli CNPAF512]
Length = 454
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 11/129 (8%)
Query: 19 VELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDG--LDP---- 72
V + S + + IS + SP T+H V C + V+ +T+ + PNTDG LD
Sbjct: 132 VVVFESCDEVEISAVHISRSPMWTLHFVNCTDVAVRNVTIENDRRLPNTDGIVLDACRGA 191
Query: 73 ---DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIF 129
DC I + + + +K+ G+A+ R NI +RR S + +C+ + IG E G +
Sbjct: 192 VIEDCTISTADDGICLKTSIGPQGVAIGR-CENILIRRCSVQSLSCA-LKIGTETHGDVT 249
Query: 130 NVTVNHLDV 138
NV V
Sbjct: 250 NVVFEDCSV 258
>gi|421592101|ref|ZP_16036849.1| polygalacturonase [Rhizobium sp. Pop5]
gi|403702279|gb|EJZ18884.1| polygalacturonase [Rhizobium sp. Pop5]
Length = 453
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 11/118 (9%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDPD---------CYIESGN 80
IS++ SP T+H V C + V+ +T+ + PNTDG+ D C I + +
Sbjct: 143 ISSIHISRSPMWTLHFVDCTDLTVRNVTIENDRRLPNTDGIVLDACRGATIENCKISTAD 202
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNHLDV 138
+ +K+ G+A+ R NI VRR + + +C+ + IG E G + NV DV
Sbjct: 203 DGICLKTSIGPQGVAIGR-CENILVRRCTVQSLSCA-LKIGTETHGDVTNVVFEDCDV 258
>gi|146311767|ref|YP_001176841.1| glycoside hydrolase family protein [Enterobacter sp. 638]
gi|145318643|gb|ABP60790.1| glycoside hydrolase, family 28 [Enterobacter sp. 638]
Length = 460
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 21/134 (15%)
Query: 15 RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP-- 72
R L+ + S N+LI +T +SPS + Y + + G +LSP APNTD +DP
Sbjct: 170 RPRLIYITRSHNVLI-DGVTLTHSPSFHVVTRYAHDVDINGTRILSPWHAPNTDAIDPID 228
Query: 73 -------DCYIESGNGLVAVKSGWDH----DGIAMARPSSNIAVRRVSGTTPTCSGVGIG 121
+ YI+ + +A+K+ DG+ NI + + T G+ IG
Sbjct: 229 SQNIRITNNYIDCNDDHIAIKAEKADPRFPDGVV-----DNIYI--ANNTLKQGRGISIG 281
Query: 122 REMSGRIFNVTVNH 135
E +G + NV V +
Sbjct: 282 SESAGGVNNVLVEN 295
>gi|427404324|ref|ZP_18895064.1| hypothetical protein HMPREF9710_04660 [Massilia timonae CCUG 45783]
gi|425717175|gb|EKU80141.1| hypothetical protein HMPREF9710_04660 [Massilia timonae CCUG 45783]
Length = 619
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 18 LVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP----- 72
++EL+ S +L+ +P HPV CR+ ++ + + S PN+DG DP
Sbjct: 313 MIELIGCSKVLL-QGYQVNAAPFWLHHPVDCRDLLIRRVNMES--LGPNSDGFDPESCDG 369
Query: 73 ----DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRI 128
DC +G+ +A+K+G + D P+ N+ +R + GV +G EM+G I
Sbjct: 370 VLVDDCLFNNGDDCIAIKAGKNLD--TGHGPTRNVVIRNCVMNS-GHGGVTLGSEMAGGI 426
Query: 129 FNVTVNHLD 137
+V L+
Sbjct: 427 EHVYAEKLE 435
>gi|337746270|ref|YP_004640432.1| hypothetical protein KNP414_02001 [Paenibacillus mucilaginosus
KNP414]
gi|336297459|gb|AEI40562.1| hypothetical protein KNP414_02001 [Paenibacillus mucilaginosus
KNP414]
Length = 475
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 22/141 (15%)
Query: 12 KHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAP------ 65
K RG V L N + + ++T SP+ +H +YC V + + +
Sbjct: 183 KGFRGRAVCLRNVDGVYL-KDITVRQSPAWCVHLIYCNGVSVNHIEIHTKKDEQGRRYEH 241
Query: 66 --NTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTT-P 113
N DGL+PD I S + +A+KSG + +G + PS NI R+S T
Sbjct: 242 IFNGDGLNPDSTSDVYIFNSMIASQDDCIAIKSGRNEEGRRVGIPSQNI---RISNCTFK 298
Query: 114 TCSGVGIGREMSGRIFNVTVN 134
+ GV G EMSG + NV ++
Sbjct: 299 SGFGVATGSEMSGGVRNVRIS 319
>gi|15893646|ref|NP_346995.1| polygalacturonase [Clostridium acetobutylicum ATCC 824]
gi|337735568|ref|YP_004635015.1| polygalacturonase [Clostridium acetobutylicum DSM 1731]
gi|384457079|ref|YP_005669499.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|15023202|gb|AAK78335.1|AE007550_2 Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
ATCC 824]
gi|325507768|gb|ADZ19404.1| Putative polygalacturonase (pectinase) [Clostridium acetobutylicum
EA 2018]
gi|336292627|gb|AEI33761.1| putative polygalacturonase (pectinase) [Clostridium acetobutylicum
DSM 1731]
Length = 513
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 18/137 (13%)
Query: 3 WDLWWNSTLKHT---RGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVL 59
+D WW + R + L NIL+ +T NSPS TIHP+ + +++
Sbjct: 206 FDTWWFKAKEKRIAWRPRTLFLNACKNILV-EGVTIKNSPSWTIHPLMSDHLKFINLSIE 264
Query: 60 SPLSAPNTDGLDPDC---------YIESGNGLVAVKSGWDHDGIAMARP--SSNIAVRRV 108
+P +APNTD LDP+ G+ +A+KSG I+ P S NI +R
Sbjct: 265 NPFNAPNTDALDPESCKNVLILGDTFSVGDDCIAIKSG--KIDISKKNPVSSENINIRNC 322
Query: 109 SGTTPTCSGVGIGREMS 125
+ + V +G EMS
Sbjct: 323 NMRSGH-GAVVLGSEMS 338
>gi|423301865|ref|ZP_17279888.1| hypothetical protein HMPREF1057_03029 [Bacteroides finegoldii
CL09T03C10]
gi|408470956|gb|EKJ89488.1| hypothetical protein HMPREF1057_03029 [Bacteroides finegoldii
CL09T03C10]
Length = 505
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 25/153 (16%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+RW + ++ K RG LVE S+ + +S T + +Y + + G+T+ +
Sbjct: 187 LRWIVDYD--CKRVRGILVE---RSSDITLSGFTLMRTGFWGCQILYSDHCTINGLTINN 241
Query: 61 PLSA--PNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR--- 106
+ P+TDG+D D C I+ + + +KSG D DG+ + RP+ I +R
Sbjct: 242 NIGGHGPSTDGIDIDSSTHVLVENCDIDCNDDNICIKSGRDADGLRVNRPTEKIVIRNCI 301
Query: 107 -RVSGTTPTCSGVGIGREMSGRIFNVTVNHLDV 138
R TC G E SG I N+ +LD
Sbjct: 302 ARKGAGLITC-----GSETSGSIRNILGYNLDA 329
>gi|255691107|ref|ZP_05414782.1| exo-poly-alpha-D-galacturonosidase [Bacteroides finegoldii DSM
17565]
gi|260623460|gb|EEX46331.1| polygalacturonase (pectinase) [Bacteroides finegoldii DSM 17565]
Length = 505
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 25/153 (16%)
Query: 1 MRWDLWWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLS 60
+RW + ++ K RG LVE S+ + +S T + +Y + + G+T+ +
Sbjct: 187 LRWIVDYD--CKRVRGILVE---RSSDITLSGFTLMRTGFWGCQILYSDHCTINGLTINN 241
Query: 61 PLSA--PNTDGLDPD---------CYIESGNGLVAVKSGWDHDGIAMARPSSNIAVR--- 106
+ P+TDG+D D C I+ + + +KSG D DG+ + RP+ I +R
Sbjct: 242 NIGGHGPSTDGIDIDSSTHVLVENCDIDCNDDNICIKSGRDADGLRVNRPTEKIVIRNCI 301
Query: 107 -RVSGTTPTCSGVGIGREMSGRIFNVTVNHLDV 138
R TC G E SG I N+ +LD
Sbjct: 302 ARKGAGLITC-----GSETSGSIRNILGYNLDA 329
>gi|326800288|ref|YP_004318107.1| glycoside hydrolase [Sphingobacterium sp. 21]
gi|326551052|gb|ADZ79437.1| glycoside hydrolase family 28 [Sphingobacterium sp. 21]
Length = 543
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 11/139 (7%)
Query: 6 WWNSTLKHTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAP 65
++ + R +++ L IL+ +TF NS + IHP+ + ++ + V +P +
Sbjct: 206 FYEEIKDYLRPNMILLEKCERILL-EGVTFQNSAAWNIHPLMSADLTIRNINVRNPWYSQ 264
Query: 66 NTDGLD---------PDCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCS 116
N DGLD + G+ + +KSG + G P+ N+ VR +
Sbjct: 265 NGDGLDIESCKNVLVEQSTFDVGDDAICIKSGRNEAGRERGMPTENLWVRNCT-VYHAHG 323
Query: 117 GVGIGREMSGRIFNVTVNH 135
G +G EMSG N+ V++
Sbjct: 324 GFVVGSEMSGGAKNLYVDN 342
>gi|300715765|ref|YP_003740568.1| Pectin lyase fold domain protein, virulence factor [Erwinia
billingiae Eb661]
gi|299061601|emb|CAX58716.1| Pectin lyase fold domain protein, virulence factor [Erwinia
billingiae Eb661]
Length = 791
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 95/240 (39%), Gaps = 56/240 (23%)
Query: 30 ISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLD---------PDCYIESGN 80
I L NSP I + V+ + + +P+S+PNTDG+D + I +G+
Sbjct: 534 IEQLHLTNSPMWNIVIRNSADITVQNVRITNPVSSPNTDGMDIVSSRNITVSNMDIHTGD 593
Query: 81 GLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGREMSGRIFNVTVNHLDVWM 140
+A+KSG +G A A S +I + G+ +G E + I VT+NH+
Sbjct: 594 DNIAIKSGL-VNGTAAA--SKDITIE--DSVMRDGHGISVGSETANGIGKVTINHVTFLN 648
Query: 141 QQQG----------------------------------SYKDRLRLYGH----PKEGWDP 162
+ G SY + GH P E
Sbjct: 649 TENGVRIKSARDRGENIGPLIASHLTMTNVVTPVLVTNSYSGQAGAQGHTLTQPIETAAV 708
Query: 163 KA-IPKISGISFVNVVSVNTTKAPVLAGIIGTQFEEICMKNVSLLVQAPSVKWQCRFVSG 221
A PK+ GI ++++ + A + +G+ + E++ + N+ + Q Q R+VSG
Sbjct: 709 TASTPKMKGIHISDLMATKASYAMIFSGLPESPVEDVTLNNIRIDAQ---YGVQARYVSG 765
>gi|445494993|ref|ZP_21462037.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
gi|444791154|gb|ELX12701.1| pectin lyase fold-containing protein [Janthinobacterium sp. HH01]
Length = 624
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 15/133 (11%)
Query: 13 HTRGHLVELMNSSNILIISNLTFCNSPSRTIHPVYCRNGFVKGMTVLSPLSAPNTDGLDP 72
+ R H+V+ ++ +N+L T N+P +PV C N VK + S PN+DG DP
Sbjct: 315 YLRPHMVQFISCTNVLFEGYQT-TNTPFWQHNPVNCHNMHVKRIYANS--MGPNSDGFDP 371
Query: 73 ---------DCYIESGNGLVAVKSGWDHDGIAMARPSSNIAVRRVSGTTPTCSGVGIGRE 123
DC+ +G+ +A+ SG D P+ NI ++ + + +G
Sbjct: 372 ESCTNVLIEDCHFNTGDDCIAIDSGKGPD--IQFGPAKNIVIQNCKMQSGH-GALTLGSI 428
Query: 124 MSGRIFNVTVNHL 136
MSG I N+ +L
Sbjct: 429 MSGGIENIYAQNL 441
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.135 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,821,798,088
Number of Sequences: 23463169
Number of extensions: 158987472
Number of successful extensions: 323737
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 876
Number of HSP's that attempted gapping in prelim test: 321281
Number of HSP's gapped (non-prelim): 1955
length of query: 225
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 88
effective length of database: 9,144,741,214
effective search space: 804737226832
effective search space used: 804737226832
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 74 (33.1 bits)