Your job contains 1 sequence.
>038537
MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSD
NFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLD
KRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQS
SVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLI
FSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQT
FKVWRVKVMPDQEKTMCLDYSDYHSNSKTTTTKMDYEMSPVLSPSWVEKKMKASNYFQ
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038537
(358 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2074825 - symbol:AT3G50390 "AT3G50390" species... 618 2.4e-60 1
TAIR|locus:2066276 - symbol:AT2G26490 "AT2G26490" species... 570 2.9e-55 1
TAIR|locus:2010157 - symbol:AT1G49450 "AT1G49450" species... 543 2.1e-52 1
TAIR|locus:2116194 - symbol:AT4G34380 "AT4G34380" species... 542 2.7e-52 1
TAIR|locus:2085929 - symbol:AT3G18950 "AT3G18950" species... 541 3.5e-52 1
TAIR|locus:2015423 - symbol:AT1G47610 "AT1G47610" species... 514 2.5e-49 1
TAIR|locus:2024031 - symbol:AT1G24530 "AT1G24530" species... 445 5.2e-42 1
TAIR|locus:2032452 - symbol:AT1G24130 "AT1G24130" species... 440 1.7e-41 1
TAIR|locus:2170061 - symbol:AT5G50120 "AT5G50120" species... 402 1.9e-37 1
TAIR|locus:2083710 - symbol:AT3G51930 "AT3G51930" species... 395 1.0e-36 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 225 2.2e-16 1
RGD|1309121 - symbol:Fbxw11 "F-box and WD repeat domain c... 217 2.8e-15 1
UNIPROTKB|J9P544 - symbol:FBXW11 "Uncharacterized protein... 217 3.0e-15 1
UNIPROTKB|B4DH70 - symbol:FBXW11 "cDNA FLJ54601, highly s... 217 3.0e-15 1
UNIPROTKB|F1P5E8 - symbol:FBXW11 "Uncharacterized protein... 217 3.1e-15 1
UNIPROTKB|F1M373 - symbol:Fbxw11 "Protein Fbxw11" species... 217 3.3e-15 1
UNIPROTKB|E2RTE4 - symbol:FBXW11 "Uncharacterized protein... 217 3.3e-15 1
UNIPROTKB|F1MLG0 - symbol:FBXW11 "Uncharacterized protein... 217 3.3e-15 1
UNIPROTKB|F1PBF1 - symbol:FBXW11 "Uncharacterized protein... 217 3.5e-15 1
UNIPROTKB|Q9UKB1 - symbol:FBXW11 "F-box/WD repeat-contain... 217 3.5e-15 1
MGI|MGI:2144023 - symbol:Fbxw11 "F-box and WD-40 domain p... 217 3.5e-15 1
WB|WBGene00003009 - symbol:lin-23 species:6239 "Caenorhab... 215 9.0e-15 1
UNIPROTKB|Q09990 - symbol:lin-23 "F-box/WD repeat-contain... 215 9.0e-15 1
RGD|1359721 - symbol:Btrc "beta-transducin repeat contain... 212 1.2e-14 1
ZFIN|ZDB-GENE-030131-6305 - symbol:fbxw11a "F-box and WD-... 211 1.6e-14 1
MGI|MGI:1338871 - symbol:Btrc "beta-transducin repeat con... 212 1.7e-14 1
UNIPROTKB|F1LMH8 - symbol:Btrc "Protein Btrc" species:101... 212 1.7e-14 1
UNIPROTKB|Q68DS0 - symbol:DKFZp781N011 "Putative uncharac... 211 1.9e-14 1
UNIPROTKB|F1MVN1 - symbol:BTRC "Uncharacterized protein" ... 211 1.9e-14 1
UNIPROTKB|F1S8U2 - symbol:BTRC "Uncharacterized protein" ... 210 2.0e-14 1
ZFIN|ZDB-GENE-040426-2903 - symbol:fbxw11b "F-box and WD-... 210 2.2e-14 1
UNIPROTKB|F1NYG1 - symbol:BTRC "Uncharacterized protein" ... 211 2.2e-14 1
UNIPROTKB|E2RDC4 - symbol:BTRC "Uncharacterized protein" ... 211 2.2e-14 1
UNIPROTKB|Q9Y297 - symbol:BTRC "F-box/WD repeat-containin... 211 2.2e-14 1
UNIPROTKB|E1BWK2 - symbol:FBXW11 "Uncharacterized protein... 209 2.8e-14 1
SGD|S000002675 - symbol:CIA1 "Component of cytosolic iron... 201 5.4e-14 1
FB|FBgn0023423 - symbol:slmb "supernumerary limbs" specie... 206 5.9e-14 1
WB|WBGene00004767 - symbol:sel-10 species:6239 "Caenorhab... 204 1.3e-13 1
UNIPROTKB|Q93794 - symbol:sel-10 "F-box/WD repeat-contain... 204 1.3e-13 1
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 140 5.5e-13 3
DICTYBASE|DDB_G0289115 - symbol:mhkB "myosin heavy chain ... 194 1.4e-12 2
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 176 2.1e-12 2
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 191 4.0e-12 1
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 176 5.2e-12 2
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 176 5.2e-12 2
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 176 5.2e-12 2
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 176 5.2e-12 2
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 176 5.2e-12 2
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 176 5.2e-12 2
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 176 5.2e-12 2
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 176 5.2e-12 2
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 176 5.2e-12 2
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 180 6.0e-12 2
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 175 6.9e-12 2
UNIPROTKB|G8JKX8 - symbol:COPB2 "Coatomer subunit beta'" ... 190 7.4e-12 1
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 174 9.2e-12 2
UNIPROTKB|B4DZI8 - symbol:COPB2 "Coatomer protein complex... 190 1.0e-11 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 181 1.2e-11 1
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 173 1.2e-11 2
UNIPROTKB|E1C016 - symbol:COPB2 "Uncharacterized protein"... 192 1.5e-11 2
DICTYBASE|DDB_G0283005 - symbol:agtA "UDP-Gal:fucoside al... 185 2.3e-11 1
MGI|MGI:1354962 - symbol:Copb2 "coatomer protein complex,... 190 2.5e-11 2
UNIPROTKB|P35605 - symbol:COPB2 "Coatomer subunit beta'" ... 190 2.5e-11 2
UNIPROTKB|E2R667 - symbol:COPB2 "Uncharacterized protein"... 190 2.5e-11 2
UNIPROTKB|P35606 - symbol:COPB2 "Coatomer subunit beta'" ... 190 2.5e-11 2
UNIPROTKB|F1SL54 - symbol:COPB2 "Uncharacterized protein"... 190 2.5e-11 2
RGD|628746 - symbol:Copb2 "coatomer protein complex, subu... 186 3.0e-11 1
UNIPROTKB|H3BPD8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 160 3.5e-11 1
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 160 3.5e-11 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 180 3.6e-11 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 177 4.3e-11 1
DICTYBASE|DDB_G0291231 - symbol:mhkA "myosin heavy chain ... 185 5.3e-11 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 176 7.6e-11 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 177 8.0e-11 1
ZFIN|ZDB-GENE-010724-7 - symbol:copb2 "coatomer protein c... 181 1.1e-10 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 174 1.4e-10 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 174 1.4e-10 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 183 1.6e-10 1
DICTYBASE|DDB_G0290687 - symbol:mhkC "myosin heavy chain ... 177 2.5e-10 1
RGD|708344 - symbol:Gnb3 "guanine nucleotide binding prot... 156 2.5e-10 2
POMBASE|SPAC29E6.01 - symbol:pof11 "F-box protein Pof11" ... 174 2.7e-10 1
POMBASE|SPCC16A11.02 - symbol:utp13 "U3 snoRNP-associated... 169 3.1e-10 2
UNIPROTKB|P16520 - symbol:GNB3 "Guanine nucleotide-bindin... 153 4.6e-10 2
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 164 5.2e-10 2
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 158 5.5e-10 2
FB|FBgn0025724 - symbol:beta'Cop "beta'-coatomer protein"... 176 6.5e-10 2
POMBASE|SPAC57A10.05c - symbol:pof1 "F-box/WD repeat prot... 171 7.9e-10 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 164 8.7e-10 2
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 164 8.7e-10 2
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 164 8.7e-10 2
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 164 8.7e-10 2
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 164 8.7e-10 2
UNIPROTKB|F1NM37 - symbol:TBL3 "Uncharacterized protein" ... 162 1.1e-09 2
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 167 1.1e-09 1
UNIPROTKB|E1BB14 - symbol:GNB3 "Uncharacterized protein" ... 150 1.3e-09 2
UNIPROTKB|F1P8Q5 - symbol:GNB3 "Guanine nucleotide-bindin... 150 1.3e-09 2
UNIPROTKB|P79147 - symbol:GNB3 "Guanine nucleotide-bindin... 150 1.3e-09 2
UNIPROTKB|F1SLU8 - symbol:GNB3 "Uncharacterized protein" ... 150 1.3e-09 2
RGD|2321145 - symbol:Fbxw7 "F-box and WD repeat domain co... 149 1.5e-09 2
SGD|S000000653 - symbol:PWP2 "Conserved 90S pre-ribosomal... 147 1.6e-09 2
WARNING: Descriptions of 515 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2074825 [details] [associations]
symbol:AT3G50390 "AT3G50390" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BT030030 IPI:IPI00547079
RefSeq:NP_190608.2 UniGene:At.50263 ProteinModelPortal:A2RVN9
SMR:A2RVN9 STRING:A2RVN9 PRIDE:A2RVN9 EnsemblPlants:AT3G50390.1
GeneID:824203 KEGG:ath:AT3G50390 TAIR:At3g50390
HOGENOM:HOG000236376 InParanoid:A2RVN9 OMA:HKKLLQF PhylomeDB:A2RVN9
ProtClustDB:CLSN2681936 Genevestigator:A2RVN9 Uniprot:A2RVN9
Length = 469
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 141/325 (43%), Positives = 195/325 (60%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSD 60
+++TGS S IRVW+ VE K+ G V+AI+ + +FT ++D KIR+W +
Sbjct: 110 LLYTGSDSKNIRVWKNH--VEFSSFKSNSGLVKAIVLAGDKIFTGHQDGKIRVWKAASKE 167
Query: 61 NFRTKKVTTLPRR----------SSFLSFSKSNTQQ-----QHRDCVSCMAFYHAEGLLY 105
+ ++V T+P SS+ +F++ N +H D +SC+A + LLY
Sbjct: 168 SNVHRRVGTMPNLLDYIRNSIVPSSYFNFTRRNRSSAALGFRHLDAISCLALSEDKRLLY 227
Query: 106 TGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRV-- 163
+GS+DKT K WRV D RC V+S AHE VNA VV+ DG VFT S+DG+VK+WRR
Sbjct: 228 SGSWDKTFKVWRVSDLRC--VESVNAHEDAVNA-VVSGFDGLVFTGSADGTVKVWRREDQ 284
Query: 164 YRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFL 223
++ H + TL Q +V A+A+ +Y GSSDG++NFWE++ +GG L
Sbjct: 285 AKDTKHFFSETLLKQDCAVTAIAVDQ--SATLVYCGSSDGTVNFWEREN---NMKNGGVL 339
Query: 224 QGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEM 283
+GH AVLCLVA L+FSGS D IRVWRR EGG H CL+VL GH GPV+CLA +
Sbjct: 340 KGHKLAVLCLVAAGNLMFSGSADLGIRVWRRPEGGGEHVCLSVLTGHAGPVKCLAVERDQ 399
Query: 284 EKVV--MGFLVYSSSLDQTFKVWRV 306
E V ++VYS SLD++ K+WRV
Sbjct: 400 ESVSGERRWIVYSGSLDRSVKMWRV 424
Score = 179 (68.1 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 59/186 (31%), Positives = 91/186 (48%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWR----VLDKRCTCVDSFVAHESNVNAIVVNQ 143
H D V+ + +GL++TGS D TVK WR D + ++ + + V AI V+Q
Sbjct: 252 HEDAVNAVVSGF-DGLVFTGSADGTVKVWRREDQAKDTKHFFSETLLKQDCAVTAIAVDQ 310
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
V+ SSDG+V W R EN+ LK + +V L + N ++SGS+D
Sbjct: 311 SATLVYCGSSDGTVNFWER---ENNMKNGGVLKGHKLAVLCLVAAG---N-LMFSGSADL 363
Query: 204 SINFWEKDKMSGGFNHG--GFLQGHCFAVLCLVAIEK-----------LIFSGSEDTTIR 250
I W + + GG H L GH V CL A+E+ +++SGS D +++
Sbjct: 364 GIRVWRRPE--GGGEHVCLSVLTGHAGPVKCL-AVERDQESVSGERRWIVYSGSLDRSVK 420
Query: 251 VWRRAE 256
+WR +E
Sbjct: 421 MWRVSE 426
Score = 145 (56.1 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 57/224 (25%), Positives = 97/224 (43%)
Query: 1 MVFTGSSSTRIRVWRQPD--CVERGFIKARHGEVRAILA-HDNMLFTTNKDCKIRIWNFT 57
++++GS +VWR D CVE + A V A+++ D ++FT + D +++W
Sbjct: 225 LLYSGSWDKTFKVWRVSDLRCVES--VNAHEDAVNAVVSGFDGLVFTGSADGTVKVWRR- 281
Query: 58 VSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDC-VSCMAFYHAEGLLYTGSFDKTVKAW 116
D + K F FS++ +Q DC V+ +A + L+Y GS D TV W
Sbjct: 282 -EDQAKDTK--------HF--FSETLLKQ---DCAVTAIAVDQSATLVYCGSSDGTVNFW 327
Query: 117 RVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLK 176
+ H+ V +V + +F+ S+D +++WRR H L
Sbjct: 328 E-RENNMKNGGVLKGHKLAVLCLVAAGN--LMFSGSADLGIRVWRRPEGGGEHVCLSVLT 384
Query: 177 FQQSSVNALALSSFFDN------YFLYSGSSDGSINFWEKDKMS 214
V LA+ ++ + +YSGS D S+ W + S
Sbjct: 385 GHAGPVKCLAVERDQESVSGERRWIVYSGSLDRSVKMWRVSESS 428
Score = 45 (20.9 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 9/43 (20%), Positives = 21/43 (48%)
Query: 23 GFIKARHGEVRAILAHDNMLFTTNKDCKIRIW-NFTVSDNFRT 64
G + G + ++ ++L+T + IR+W N +F++
Sbjct: 92 GSLVREEGHIYSLATSGDLLYTGSDSKNIRVWKNHVEFSSFKS 134
>TAIR|locus:2066276 [details] [associations]
symbol:AT2G26490 "AT2G26490" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0006944 "cellular membrane fusion" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 EMBL:AC002505 HOGENOM:HOG000236376
ProtClustDB:CLSN2681936 EMBL:BT015086 EMBL:BT015900 IPI:IPI00520584
PIR:T00982 RefSeq:NP_180217.1 UniGene:At.50101
ProteinModelPortal:O48716 SMR:O48716 STRING:O48716 PaxDb:O48716
PRIDE:O48716 EnsemblPlants:AT2G26490.1 GeneID:817190
KEGG:ath:AT2G26490 TAIR:At2g26490 InParanoid:O48716 OMA:KVSPKNG
PhylomeDB:O48716 ArrayExpress:O48716 Genevestigator:O48716
Uniprot:O48716
Length = 465
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 130/323 (40%), Positives = 189/323 (58%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSD 60
+++TGS S IRVW+ + E K G V+AI+ +FT ++D KIR+W + +
Sbjct: 108 LLYTGSDSKNIRVWK--NLKEFSAFKCNSGLVKAIVISGEKIFTGHQDGKIRVWKVSPKN 165
Query: 61 NFRTKKVTTLP----------RRSSFLSFSKSNTQQ--QHRDCVSCMAFYHAEGLLYTGS 108
K+ TLP + +++ K T +H D VSC++ +GLLY+ S
Sbjct: 166 QSLHKRSGTLPTLKDIFKASLKPRNYVEVKKHRTALWIKHADAVSCLSLNDEQGLLYSAS 225
Query: 109 FDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVY--RE 166
+D+T+K WR+ D +C ++S AH+ VN+ VV+ + VF+ S+DG+VK W+R +
Sbjct: 226 WDRTIKVWRIADSKC--LESIPAHDDAVNS-VVSTTEAIVFSGSADGTVKAWKRDQQGKY 282
Query: 167 NSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGH 226
HTL TL Q+S+V ALA+S + +Y GSSDG +NFWE++K N+GG L+GH
Sbjct: 283 TKHTLMQTLTKQESAVTALAVSK--NGAAVYFGSSDGLVNFWEREKQ---LNYGGILKGH 337
Query: 227 CFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEME-- 284
AVLCL L+FSGS D TI VW+R G H CL+VL GH GPV+CLA + E
Sbjct: 338 KLAVLCLEVAGSLVFSGSADKTICVWKR--DGNIHTCLSVLTGHTGPVKCLAVEADREAS 395
Query: 285 -KVVMGFLVYSSSLDQTFKVWRV 306
+ ++VYS SLD++ KVW V
Sbjct: 396 ERRDKKWIVYSGSLDKSVKVWGV 418
Score = 150 (57.9 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 55/186 (29%), Positives = 91/186 (48%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDK----RCTCVDSFVAHESNVNAIVVNQ 143
H D V+ + E ++++GS D TVKAW+ + + T + + ES V A+ V++
Sbjct: 247 HDDAVNSVVST-TEAIVFSGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTALAVSK 305
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
+ V+ SSDG V W R + N + LK + +V L ++ ++SGS+D
Sbjct: 306 NGAAVYFGSSDGLVNFWEREKQLNYGGI---LKGHKLAVLCLEVAGSL----VFSGSADK 358
Query: 204 SINFWEKDKMSGGFNHG--GFLQGHCFAVLCLV------AIEK-----LIFSGSEDTTIR 250
+I W++D G H L GH V CL A E+ +++SGS D +++
Sbjct: 359 TICVWKRD----GNIHTCLSVLTGHTGPVKCLAVEADREASERRDKKWIVYSGSLDKSVK 414
Query: 251 VWRRAE 256
VW +E
Sbjct: 415 VWGVSE 420
Score = 46 (21.3 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 23 GFIKARHGEVRAILAHDNMLFTTNKDCKIRIW 54
G + G + ++ A ++L+T + IR+W
Sbjct: 90 GSLVREEGHIYSLAATKDLLYTGSDSKNIRVW 121
>TAIR|locus:2010157 [details] [associations]
symbol:AT1G49450 "AT1G49450" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC007504
ProtClustDB:CLSN2681936 IPI:IPI00540218 PIR:B96531
RefSeq:NP_175369.1 UniGene:At.28389 ProteinModelPortal:Q9XIB2
SMR:Q9XIB2 STRING:Q9XIB2 PRIDE:Q9XIB2 EnsemblPlants:AT1G49450.1
GeneID:841369 KEGG:ath:AT1G49450 TAIR:At1g49450 InParanoid:Q9XIB2
OMA:WEREKHL PhylomeDB:Q9XIB2 Genevestigator:Q9XIB2 Uniprot:Q9XIB2
Length = 471
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 132/332 (39%), Positives = 187/332 (56%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILA-HDNMLFTTNKDCKIRIWNFTVS 59
++FTGS S IRVW+ D + K+ G V+AI+ DN +FT ++D KIR+W +
Sbjct: 146 LLFTGSDSKNIRVWK--DLKDFSGFKSTSGFVKAIVVTRDNRVFTGHQDGKIRVWRGSKK 203
Query: 60 DNFRTKKVTTLPRRSSFLSFS------------KSNTQQQHRDCVSCMAFYHAEGLLYTG 107
+ + +V +LP FL+ S K+ + +H D VSC++ GLLY+G
Sbjct: 204 NPEKYSRVGSLPTLKEFLTKSVNPRNYVEVRRRKNVLKIRHFDAVSCLSLNEDLGLLYSG 263
Query: 108 SFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVY--R 165
S+DKT+K WR+ D +C ++S AH+ VN +V DD VFT S+DG++K+W+R +
Sbjct: 264 SWDKTLKVWRLSDSKC--LESIEAHDDAVNTVVSGFDD-LVFTGSADGTLKVWKREVQGK 320
Query: 166 ENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQG 225
E H L L Q+++V ALA++ + +Y GSSDG++NFWE+ K H G + G
Sbjct: 321 EMKHVLVQVLMKQENAVTALAVN--LTDAVVYCGSSDGTVNFWERQKY---LTHKGTIHG 375
Query: 226 HCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEME- 284
H AVLCL L+ SG D I VW+R G H CL+VL H GPV+CLAA E E
Sbjct: 376 HRMAVLCLATAGSLLLSGGADKNICVWKRNGDGS-HTCLSVLMDHEGPVKCLAAVEEAEE 434
Query: 285 ----------KVVMGFLVYSSSLDQTFKVWRV 306
K ++VYS SLD + KVWRV
Sbjct: 435 DHNDGDDGGEKGDQRWIVYSGSLDNSVKVWRV 466
Score = 105 (42.0 bits), Expect = 0.00057, Sum P(2) = 0.00056
Identities = 35/108 (32%), Positives = 52/108 (48%)
Query: 226 HCFAVLCLVAIEKL--IFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEM 283
H AV CL E L ++SGS D T++VWR ++ +CL ++ H V
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDS----KCLESIEAHDDAVNT------- 292
Query: 284 EKVVMGF--LVYSSSLDQTFKVWRVKVMPDQEKTMCLDYSDYHSNSKT 329
VV GF LV++ S D T KVW+ +V + K + + N+ T
Sbjct: 293 --VVSGFDDLVFTGSADGTLKVWKREVQGKEMKHVLVQVLMKQENAVT 338
Score = 54 (24.1 bits), Expect = 0.00057, Sum P(2) = 0.00056
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 17 PDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIW 54
PD G + + G V ++ A ++LFT + IR+W
Sbjct: 122 PDNGLIGTVVRQEGHVYSLAASGDLLFTGSDSKNIRVW 159
>TAIR|locus:2116194 [details] [associations]
symbol:AT4G34380 "AT4G34380" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AL035521 EMBL:AL161585
HOGENOM:HOG000236376 ProtClustDB:CLSN2681936 EMBL:BT005888
EMBL:AK118385 IPI:IPI00526524 PIR:T04784 RefSeq:NP_195164.1
UniGene:At.31507 ProteinModelPortal:Q9SZ03 SMR:Q9SZ03 IntAct:Q9SZ03
STRING:Q9SZ03 EnsemblPlants:AT4G34380.1 GeneID:829588
KEGG:ath:AT4G34380 TAIR:At4g34380 InParanoid:Q9SZ03 OMA:VEEERAC
PhylomeDB:Q9SZ03 Genevestigator:Q9SZ03 Uniprot:Q9SZ03
Length = 495
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 137/373 (36%), Positives = 204/373 (54%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSD 60
+++TGS S IRVW+ + E K+ G ++AI+ + +FT ++D KIRIW +
Sbjct: 137 LLYTGSDSKNIRVWK--NLKEHAGFKSSSGLIKAIVIFGDRIFTGHQDGKIRIWKVSKRK 194
Query: 61 NFRTKKVTTLPRRSSFLSFS------------KSNTQQQHRDCVSCMAFYHAEGLLYTGS 108
+ K+V TLP S + S +++ + +H D VS ++ GLLY+ S
Sbjct: 195 PGKHKRVGTLPTFKSMVKSSVNPKHFMEVRRNRNSVKTKHNDAVSSLSLDVELGLLYSSS 254
Query: 109 FDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVY--RE 166
+D T+K WR+ D +C ++S AH+ +N+++ DD VFT S+DG+VK+W+R +
Sbjct: 255 WDTTIKVWRIADSKC--LESIHAHDDAINSVMSGFDD-LVFTGSADGTVKVWKRELQGKG 311
Query: 167 NSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGH 226
HTL L Q+++V ALA+ S + +Y GSSDG +N+WE+ K S F GG L+GH
Sbjct: 312 TKHTLAQVLLKQENAVTALAVKS--QSSIVYCGSSDGLVNYWERSKRS--FT-GGILKGH 366
Query: 227 CFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEME-- 284
AVLCL L+ SGS D I VWRR H+CL+VL GH GPV+CLA E
Sbjct: 367 KSAVLCLGIAGNLLLSGSADKNICVWRRDPSDKSHQCLSVLTGHMGPVKCLAVEEERACH 426
Query: 285 -----KVVMG---FLVYSSSLDQTFKVWRVKVMPDQEKTMCLDYSDYHSNSKTTTTKMDY 336
V G +++YS SLD++ KVWRV K M + ++S+ ++ +
Sbjct: 427 QGAKASVAEGDRKWIIYSGSLDKSVKVWRVSERMATWKEM----DEPAASSERKSSSSPH 482
Query: 337 EMSPVLSPSWVEK 349
E S S VEK
Sbjct: 483 EGSGAWSSRNVEK 495
>TAIR|locus:2085929 [details] [associations]
symbol:AT3G18950 "AT3G18950" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AP000735
HOGENOM:HOG000236376 ProtClustDB:CLSN2681936 EMBL:BT005434
EMBL:AK117650 IPI:IPI00535619 RefSeq:NP_188525.1 UniGene:At.38474
ProteinModelPortal:Q9LJ71 SMR:Q9LJ71 STRING:Q9LJ71
EnsemblPlants:AT3G18950.1 GeneID:821427 KEGG:ath:AT3G18950
TAIR:At3g18950 InParanoid:Q9LJ71 OMA:LAINQES PhylomeDB:Q9LJ71
Genevestigator:Q9LJ71 Uniprot:Q9LJ71
Length = 473
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 129/326 (39%), Positives = 185/326 (56%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAI-LAHDNMLFTTNKDCKIRIWNFTVS 59
++FTGS S IRVW+ D + K+ G V+AI + DN +FT ++D KIR+W +
Sbjct: 150 LLFTGSDSKNIRVWK--DLKDHTGFKSTSGLVKAIVITGDNRIFTGHQDGKIRVWRGSKR 207
Query: 60 DNFRTKKVTTLPRRSSFLSFS-----------KSNTQQ-QHRDCVSCMAFYHAEGLLYTG 107
++ +LP FL+ S + N + +H D VSC++ GLLY+G
Sbjct: 208 RTGGYSRIGSLPTLKEFLTKSVNPKNYVEVRRRKNVLKIRHYDAVSCLSLNEELGLLYSG 267
Query: 108 SFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVY--R 165
S+DKT+K WR+ D +C ++S AH+ +N + DD +FT S+DG++K+W+R +
Sbjct: 268 SWDKTLKVWRLSDSKC--LESIQAHDDAINTVAAGFDD-LLFTGSADGTLKVWKRELQGK 324
Query: 166 ENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQG 225
H L L Q+++V ALA++ +Y GSSDG++NFWE K +HGG L+G
Sbjct: 325 GTKHFLVNVLMKQENAVTALAVN--ITAAVVYCGSSDGTVNFWEGQKY---LSHGGTLRG 379
Query: 226 HCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLE--- 282
H AVLCL A L+ SG D I VWRR G H CL+VL H GPV+CL A +
Sbjct: 380 HRLAVLCLAAAGSLVLSGGADKNICVWRRNGDGS-HSCLSVLMDHVGPVKCLTAVEDDGE 438
Query: 283 --MEKVVMGFLVYSSSLDQTFKVWRV 306
EK ++VYS SLD++ KVWRV
Sbjct: 439 GHREKGDQKWIVYSGSLDKSVKVWRV 464
Score = 182 (69.1 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 77/297 (25%), Positives = 129/297 (43%)
Query: 23 GFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFLSFSKS 82
G I + G V ++ A ++LFT + IR+W + D+ K + L + ++
Sbjct: 132 GTIVRQDGHVYSLAASGDLLFTGSDSKNIRVWK-DLKDHTGFKSTSGLVKAIVITGDNRI 190
Query: 83 NTQQQH------RDCVSCMAFYHAEGLLYT-GSF-DKTVKAWRVLDKRCTCVDSFVAHES 134
T Q R Y G L T F K+V ++ R + H
Sbjct: 191 FTGHQDGKIRVWRGSKRRTGGYSRIGSLPTLKEFLTKSVNPKNYVEVRRRKNVLKIRHYD 250
Query: 135 NVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNY 194
V+ + +N++ G +++ S D ++K+WR +S L +++ ++N +A FD+
Sbjct: 251 AVSCLSLNEELGLLYSGSWDKTLKVWRL---SDSKCLE-SIQAHDDAINTVAAG--FDD- 303
Query: 195 FLYSGSSDGSINFWEKDKMSGGFNHGGFL------QGHCFAVLCLVAIEKLIFSGSEDTT 248
L++GS+DG++ W+++ G H FL Q + L + +++ GS D T
Sbjct: 304 LLFTGSADGTLKVWKRELQGKGTKH--FLVNVLMKQENAVTALAVNITAAVVYCGSSDGT 361
Query: 249 IRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWR 305
+ W EG Y L GHR V CLAA+ G LV S D+ VWR
Sbjct: 362 VNFW---EGQKYLSHGGTLRGHRLAVLCLAAA--------GSLVLSGGADKNICVWR 407
Score = 156 (60.0 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 61/198 (30%), Positives = 93/198 (46%)
Query: 77 LSFSKS-NTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAW-RVLDKRCT---CVDSFVA 131
LS SK + Q H D ++ +A + LL+TGS D T+K W R L + T V+ +
Sbjct: 278 LSDSKCLESIQAHDDAINTVAAGF-DDLLFTGSADGTLKVWKRELQGKGTKHFLVNVLMK 336
Query: 132 HESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFF 191
E+ V A+ VN V+ SSDG+V W + SH TL+ + +V LA +
Sbjct: 337 QENAVTALAVNITAAVVYCGSSDGTVNFWEG-QKYLSHG--GTLRGHRLAVLCLAAAGSL 393
Query: 192 DNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK------------- 238
+ SG +D +I W ++ G + L H V CL A+E
Sbjct: 394 ----VLSGGADKNICVWRRNG-DGSHSCLSVLMDHVGPVKCLTAVEDDGEGHREKGDQKW 448
Query: 239 LIFSGSEDTTIRVWRRAE 256
+++SGS D +++VWR E
Sbjct: 449 IVYSGSLDKSVKVWRVTE 466
>TAIR|locus:2015423 [details] [associations]
symbol:AT1G47610 "AT1G47610" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC007519 HOGENOM:HOG000236376 ProtClustDB:CLSN2681936
IPI:IPI00534811 PIR:A96517 RefSeq:NP_175192.1 UniGene:At.47680
ProteinModelPortal:Q9SX94 SMR:Q9SX94 STRING:Q9SX94
EnsemblPlants:AT1G47610.1 GeneID:841170 KEGG:ath:AT1G47610
TAIR:At1g47610 InParanoid:Q9SX94 OMA:CVWRRDG PhylomeDB:Q9SX94
Genevestigator:Q9SX94 Uniprot:Q9SX94
Length = 351
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 134/328 (40%), Positives = 189/328 (57%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAI-LAHDNMLFTTNKDCKIRIWNFTVS 59
+++TGS + IRVW+ + GF K+ G V+AI ++ + +FT ++D KIR+W T S
Sbjct: 36 LLYTGSDNNYIRVWKNLNEFS-GF-KSNSGLVKAIVISREAKVFTGHQDGKIRVWK-TSS 92
Query: 60 DNFRT-KKVTTLPRRSSFL--SFSKSNTQQ----------QHRDCVSCMAFYHAEGLLYT 106
N R + +LP L S SN + +H D VSC++ +GLLY+
Sbjct: 93 KNPRVYTRAGSLPALKDVLKSSVKPSNYVEVRRCRTALWIKHSDAVSCLSLAEDQGLLYS 152
Query: 107 GSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYR- 165
S+D+TVK WR+ D +C ++S AH+ VN++ + VFT S+DG+VK+W+R R
Sbjct: 153 ASWDRTVKVWRIHDLKC--IESIKAHDDAVNSVTTAES--LVFTGSADGTVKVWKREIRG 208
Query: 166 -ENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEK-DKMSGGFNHGGFL 223
+H+L TL Q+S+V AL S + +YSGSSDG++NFWE DK H
Sbjct: 209 KRTAHSLFQTLLKQESAVTALVTS----HMAVYSGSSDGAVNFWEMGDKKL--LKHCEVF 262
Query: 224 QGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLA----A 279
+ H AVLC+ A KL+FSG+ D I VWRR G H C++VL GH GPV+CLA +
Sbjct: 263 KKHRLAVLCIAAAGKLLFSGAADKKICVWRRE--GKVHTCVSVLTGHTGPVKCLAVVEPS 320
Query: 280 SLEMEKVVMGFLV-YSSSLDQTFKVWRV 306
E E G LV YS SLD++ KVWRV
Sbjct: 321 GGEEEDGGDGRLVLYSGSLDKSVKVWRV 348
Score = 183 (69.5 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 67/295 (22%), Positives = 125/295 (42%)
Query: 23 GFIKARHGEVRAILAHDNMLFTTNKDCKIRIW-NFTVSDNFRTK----KVTTLPRRSSFL 77
G I G + ++ A +++L+T + + IR+W N F++ K + R +
Sbjct: 18 GEIVREEGHIYSLAATNDLLYTGSDNNYIRVWKNLNEFSGFKSNSGLVKAIVISREAKVF 77
Query: 78 SFSKSNTQQQHRDCVSCMAFYHAEGLL--YTGSFDKTVKAWRVLD-KRCTCVDSFVAHES 134
+ + + + Y G L +VK ++ +RC ++ H
Sbjct: 78 TGHQDGKIRVWKTSSKNPRVYTRAGSLPALKDVLKSSVKPSNYVEVRRCRTA-LWIKHSD 136
Query: 135 NVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTM--TLKFQQSSVNALALSSFFD 192
V+ + + +D G +++ S D +VK+WR H L ++K +VN++ +
Sbjct: 137 AVSCLSLAEDQGLLYSASWDRTVKVWR------IHDLKCIESIKAHDDAVNSVTTAESL- 189
Query: 193 NYFLYSGSSDGSINFWEKDKMSGGFNHGGF--LQGHCFAVLCLVAIEKLIFSGSEDTTIR 250
+++GS+DG++ W+++ H F L AV LV ++SGS D +
Sbjct: 190 ---VFTGSADGTVKVWKREIRGKRTAHSLFQTLLKQESAVTALVTSHMAVYSGSSDGAVN 246
Query: 251 VWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWR 305
W + C V HR V C+AA+ G L++S + D+ VWR
Sbjct: 247 FWEMGDKKLLKHC-EVFKKHRLAVLCIAAA--------GKLLFSGAADKKICVWR 292
>TAIR|locus:2024031 [details] [associations]
symbol:AT1G24530 "AT1G24530" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0006857 "oligopeptide transport"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AC000103 HSSP:P16649
HOGENOM:HOG000236376 EMBL:AY045973 EMBL:AY079324 IPI:IPI00540711
RefSeq:NP_564219.1 UniGene:At.15901 ProteinModelPortal:Q9FYL1
SMR:Q9FYL1 STRING:Q9FYL1 PaxDb:Q9FYL1 EnsemblPlants:AT1G24530.1
GeneID:839068 KEGG:ath:AT1G24530 TAIR:At1g24530 InParanoid:Q9FYL1
OMA:REDSANH PhylomeDB:Q9FYL1 ProtClustDB:CLSN2687940
ArrayExpress:Q9FYL1 Genevestigator:Q9FYL1 Uniprot:Q9FYL1
Length = 418
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 113/297 (38%), Positives = 163/297 (54%)
Query: 30 GEVRAILAHDNMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFL---SFSKSNTQQ 86
G V+++ +FT ++D KI +W T + K++TTLP + L + K+ Q
Sbjct: 126 GTVKSVGFSGEKIFTAHQDGKIGVWKLTAKSGY--KQLTTLPTLNDRLRRFALPKNYVQV 183
Query: 87 ---------QHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVN 137
+H D V+ +A ++G +Y+ S+DKT+K WR D RC +S AH+ VN
Sbjct: 184 RRHKKRLWIEHADAVTALAV--SDGFIYSVSWDKTLKIWRASDLRCK--ESIKAHDDAVN 239
Query: 138 AIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLY 197
AI V+ + G V+T S+D +++W + E HTL TL+ +S+VNALAL+ D L+
Sbjct: 240 AIAVSTN-GTVYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALND--DGSVLF 296
Query: 198 SGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEG 257
SGS D SI WE++ S G L+GH A+L L + L+ SGS D T+R+WRR
Sbjct: 297 SGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSLFNVSDLLLSGSADRTVRIWRRGPD 356
Query: 258 GCYHECLAVLDGHRGPVRCLAA--SLEMEKVVMGFLVYSSSLDQTFKVWRVKVM-PD 311
Y CL VL GH PV+ LAA E++ VV + S SLD K W+V V PD
Sbjct: 357 SSY-SCLEVLSGHTKPVKSLAAVREKELDDVVS---IISGSLDGEVKCWKVSVTKPD 409
Score = 135 (52.6 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 52/214 (24%), Positives = 94/214 (43%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN-MLFTTNKDCKIRIWNFTVSD 60
+++ S +++WR D + IKA V AI N ++T + D +IR+W +
Sbjct: 208 IYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVSTNGTVYTGSADRRIRVWAKPTGE 267
Query: 61 NFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLD 120
T V TL ++H+ V+ +A +L++GS D+++ W D
Sbjct: 268 KRHTL-VATL---------------EKHKSAVNALALNDDGSVLFSGSCDRSILVWERED 311
Query: 121 -KRCTCVDSFV-AHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQ 178
V + H+ + ++ N D + + S+D +V+IWRR ++S++ L
Sbjct: 312 TSNYMAVRGALRGHDKAILSLF-NVSD-LLLSGSADRTVRIWRRG-PDSSYSCLEVLSGH 368
Query: 179 QSSVNALAL---SSFFDNYFLYSGSSDGSINFWE 209
V +LA D + SGS DG + W+
Sbjct: 369 TKPVKSLAAVREKELDDVVSIISGSLDGEVKCWK 402
>TAIR|locus:2032452 [details] [associations]
symbol:AT1G24130 "AT1G24130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC002396 HOGENOM:HOG000236376 IPI:IPI00530155 PIR:T00642
RefSeq:NP_173823.1 UniGene:At.65928 ProteinModelPortal:O48679
SMR:O48679 STRING:O48679 PRIDE:O48679 EnsemblPlants:AT1G24130.1
GeneID:839025 KEGG:ath:AT1G24130 TAIR:At1g24130 InParanoid:O48679
OMA:GFRCVES PhylomeDB:O48679 ProtClustDB:CLSN2914172
Genevestigator:O48679 Uniprot:O48679
Length = 415
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 117/312 (37%), Positives = 172/312 (55%)
Query: 21 ERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSDNFRTKK---VTTLPR---RS 74
+R + +G V++++ + L + ++D KIR+W N R +K V TLP R
Sbjct: 109 DRNVVANGNGGVKSLVILGDKLISAHQDHKIRVWKIIDESNRRGQKYKCVATLPTMNDRF 168
Query: 75 SFLSFSKSNTQ-QQHRDC--------VSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTC 125
L SKS + ++H+ C VS +A LLY+ S+D++ K WR D +C
Sbjct: 169 KTLFSSKSYVEVRRHKKCTWVHHVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKC-- 226
Query: 126 VDSFV-AHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNA 184
+DS AH+ +NAIVV++D GFV+T S+D +K+W + ++ H+L TL S+VNA
Sbjct: 227 LDSIEKAHDDAINAIVVSKD-GFVYTGSADKKIKVWNK--KDKKHSLVATLTKHLSAVNA 283
Query: 185 LALSSFFDNYFLYSGSSDGSINFWEK----DKMSGGFNHGGFLQGHCFAVLCLVAIEKLI 240
LA+S D LYSG+ D SI WE+ D + G L+GH A++CL L+
Sbjct: 284 LAISE--DGKVLYSGACDRSILVWERLINGDDEELHMSVVGALRGHRKAIMCLAVASDLV 341
Query: 241 FSGSEDTTIRVWRRA--EGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGF--LVYSSS 296
SGS D ++RVWRR E Y CLAVL+GH PV+ LA S+ + +VYS S
Sbjct: 342 LSGSADKSLRVWRRGLMEKEGY-SCLAVLEGHTKPVKSLAVSVSDSDSNSDYSCMVYSGS 400
Query: 297 LDQTFKVWRVKV 308
LD + KVW ++V
Sbjct: 401 LDLSLKVWNLRV 412
Score = 200 (75.5 bits), Expect = 7.4e-21, Sum P(2) = 7.4e-21
Identities = 67/212 (31%), Positives = 103/212 (48%)
Query: 121 KRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQS 180
K+CT +V H V+++ ++QD +++ S D S KIWR + L K
Sbjct: 184 KKCT----WVHHVDAVSSLALSQDGSLLYSASWDRSFKIWRT---SDFKCLDSIEKAHDD 236
Query: 181 SVNALALSSFFDNYFLYSGSSDGSINFW-EKDKMSGGFNHGGFLQGHCFAVLCLVAIE-- 237
++NA+ +S D F+Y+GS+D I W +KDK L H AV L E
Sbjct: 237 AINAIVVSK--DG-FVYTGSADKKIKVWNKKDKKHSLV---ATLTKHLSAVNALAISEDG 290
Query: 238 KLIFSGSEDTTIRVWRRAEGGCYHEC----LAVLDGHRGPVRCLAASLEMEKVVMGFLVY 293
K+++SG+ D +I VW R G E + L GHR + CLA + + LV
Sbjct: 291 KVLYSGACDRSILVWERLINGDDEELHMSVVGALRGHRKAIMCLAVASD--------LVL 342
Query: 294 SSSLDQTFKVWRVKVMPDQEKTMCLDYSDYHS 325
S S D++ +VWR +M ++E CL + H+
Sbjct: 343 SGSADKSLRVWRRGLM-EKEGYSCLAVLEGHT 373
Score = 108 (43.1 bits), Expect = 7.4e-21, Sum P(2) = 7.4e-21
Identities = 33/106 (31%), Positives = 56/106 (52%)
Query: 1 MVFTGSSSTRIRVW-RQPDCV-------ERGFIKARHGEVRAILAHDNMLFTTNKDCKIR 52
+++TGSS++ IRVW R+P +R + +G V++++ + L + ++D KIR
Sbjct: 81 LLYTGSSNSEIRVWPREPPFSPEYSTGDDRNVVANGNGGVKSLVILGDKLISAHQDHKIR 140
Query: 53 IWNFTVSDNFRTKK---VTTLPR---RSSFLSFSKSNTQ-QQHRDC 91
+W N R +K V TLP R L SKS + ++H+ C
Sbjct: 141 VWKIIDESNRRGQKYKCVATLPTMNDRFKTLFSSKSYVEVRRHKKC 186
Score = 51 (23.0 bits), Expect = 6.3e-15, Sum P(2) = 6.3e-15
Identities = 8/30 (26%), Positives = 18/30 (60%)
Query: 25 IKARHGEVRAILAHDNMLFTTNKDCKIRIW 54
+K + V ++ D +L+T + + +IR+W
Sbjct: 65 LKDKSSYVSSLAVSDKLLYTGSSNSEIRVW 94
>TAIR|locus:2170061 [details] [associations]
symbol:AT5G50120 "AT5G50120" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0009733 "response to auxin stimulus" evidence=RCA]
[GO:0009741 "response to brassinosteroid stimulus" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB026650
HOGENOM:HOG000236376 IPI:IPI00531222 RefSeq:NP_199823.1
UniGene:At.9028 ProteinModelPortal:Q9FG99 SMR:Q9FG99 STRING:Q9FG99
EnsemblPlants:AT5G50120.1 GeneID:835077 KEGG:ath:AT5G50120
TAIR:At5g50120 InParanoid:Q9FG99 OMA:RTLKIWR PhylomeDB:Q9FG99
ProtClustDB:CLSN2916602 Genevestigator:Q9FG99 Uniprot:Q9FG99
Length = 388
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 95/261 (36%), Positives = 144/261 (55%)
Query: 57 TVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAW 116
T+SD F +P+ + K + H D VS +A LLY+ S+D+T+K W
Sbjct: 136 TISDRFAK---CLMPKNQVEIRRHKKASWVHHVDAVSGLALSRDGTLLYSVSWDRTLKIW 192
Query: 117 RVLDKRCTCVDSFV-AHESNVNAIVVNQDDGFVFTCSSDGSVKIWRR-VYREN-----SH 169
R D +C ++SF AH+ +NA+ ++++ G ++T SSD +K+WR+ + EN H
Sbjct: 193 RTTDFKC--LESFTNAHDDAINAVALSEN-GDIYTGSSDQRIKVWRKNINEENVKKKRKH 249
Query: 170 TLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFA 229
+L L S +NALALS + L+SG SDGSI WE+D G G L+GH +
Sbjct: 250 SLVAILSEHNSGINALALSGT-NGSLLHSGGSDGSILVWERDD-GGDIVVVGMLRGHTES 307
Query: 230 VLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVV-- 287
VLCL + ++ SGS D T+R+W+ + + CLA+L+GH GPV+CL + +
Sbjct: 308 VLCLAVVSDILCSGSADKTVRLWKCSAKD--YSCLAMLEGHLGPVKCLTGAFRDSRKADE 365
Query: 288 MGFLVYSSSLDQTFKVWRVKV 308
+ +YS LD KVW+V V
Sbjct: 366 ASYHIYSGGLDSQVKVWQVLV 386
Score = 132 (51.5 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 50/221 (22%), Positives = 100/221 (45%)
Query: 1 MVFTGSSSTRIRVWRQPD--CVERGFIKARHGEVRAI-LAHDNMLFTTNKDCKIRIWNFT 57
++++ S +++WR D C+E F A + A+ L+ + ++T + D +I++W
Sbjct: 179 LLYSVSWDRTLKIWRTTDFKCLE-SFTNAHDDAINAVALSENGDIYTGSSDQRIKVWRKN 237
Query: 58 VSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEG-LLYTGSFDKTVKAW 116
+++ KK R+ S ++ +H ++ +A G LL++G D ++ W
Sbjct: 238 INEENVKKK-----RKHSLVAILS-----EHNSGINALALSGTNGSLLHSGGSDGSILVW 287
Query: 117 RVLDKRCTCVDSFV-AHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTL 175
D V + H +V + V D + + S+D +V++W+ ++ S L M L
Sbjct: 288 ERDDGGDIVVVGMLRGHTESVLCLAVVSD--ILCSGSADKTVRLWKCSAKDYS-CLAM-L 343
Query: 176 KFQQSSVNALALSSFFDN-------YFLYSGSSDGSINFWE 209
+ V L +F D+ Y +YSG D + W+
Sbjct: 344 EGHLGPVKCLT-GAFRDSRKADEASYHIYSGGLDSQVKVWQ 383
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 52/193 (26%), Positives = 93/193 (48%)
Query: 2 VFTGSSSTRIRVWRQ------PDCVERGFI----KARHGEVRAILAHDNMLFTTNKDCKI 51
++TGS+ +R+W + G + + G V++++ + LFT ++D KI
Sbjct: 51 LYTGSNDGVVRLWNANTLETLAEASSNGDVITGERGGGGAVKSLVILADKLFTAHQDHKI 110
Query: 52 RIW--NFTVSDNFRTKK---VTTLPRRSS-FLSFSKSNTQQQHRDCVSCMAFYHAEGLLY 105
R+W N V ++ KK + T+P S F Q + R +H + +
Sbjct: 111 RVWKINDVVEEDVGGKKYMHLATMPTISDRFAKCLMPKNQVEIRRHKKASWVHHVDAVSG 170
Query: 106 TG-SFDKTVK---AW-RVLDK-RCT---CVDSFV-AHESNVNAIVVNQDDGFVFTCSSDG 155
S D T+ +W R L R T C++SF AH+ +NA+ ++++ G ++T SSD
Sbjct: 171 LALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSEN-GDIYTGSSDQ 229
Query: 156 SVKIWRR-VYREN 167
+K+WR+ + EN
Sbjct: 230 RIKVWRKNINEEN 242
>TAIR|locus:2083710 [details] [associations]
symbol:AT3G51930 "AT3G51930" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 EMBL:AL049711 HOGENOM:HOG000236376 EMBL:BT008335
EMBL:AK228303 IPI:IPI00547415 PIR:T49072 RefSeq:NP_190761.1
UniGene:At.35344 ProteinModelPortal:Q9SV11 SMR:Q9SV11 STRING:Q9SV11
PRIDE:Q9SV11 EnsemblPlants:AT3G51930.1 GeneID:824356
KEGG:ath:AT3G51930 TAIR:At3g51930 InParanoid:Q9SV11 OMA:SKVFTAH
PhylomeDB:Q9SV11 ProtClustDB:CLSN2684735 Genevestigator:Q9SV11
Uniprot:Q9SV11
Length = 415
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 97/277 (35%), Positives = 157/277 (56%)
Query: 56 FTVSDNFRTKK--VTTLPRRSSFLSFSKSNTQQ--QHRDCVSCMAFYHAEGLLYTGSFDK 111
F + D T K + ++S+++ +++ + +H D +SC+A HA G++Y+GS+DK
Sbjct: 137 FRLVDTLPTTKDYLGKFMKQSNYVQTRRNHKRLWIEHADSISCLAV-HA-GIIYSGSWDK 194
Query: 112 TVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRE----- 166
T+K WR+ D +C ++S AH+ +N +V DG V++ S+DG VKIW + R+
Sbjct: 195 TLKVWRLSDLKC--LESIKAHDDAINGLVAG--DGRVYSASADGKVKIWGKEKRKQIEST 250
Query: 167 -----NSHTLTMTLKFQ-QSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHG 220
+ H L TL+ + + SVN++ +S D ++Y G SDG + WEK + G F
Sbjct: 251 SSSSSSLHVLKATLEGRAEVSVNSVVVSG--DGNWVYGGGSDGFVIGWEKKEKEGDFEEW 308
Query: 221 --GF-LQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCL 277
GF +GH AVLC+ + +++ SGS D +I +WRR G + V+ GH GPV+CL
Sbjct: 309 RLGFETRGHNMAVLCMCVVGEMVCSGSADKSIGLWRREVTGMLCK-FGVIHGHEGPVKCL 367
Query: 278 AASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQEK 314
AS V GF++YS LD++ +VW V + E+
Sbjct: 368 QAS--PNNVGAGFMLYSGGLDKSLRVWWVPKQDNLEE 402
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 82/242 (33%), Positives = 134/242 (55%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGE--VRAILAHDNMLFTTNKDCKIRIWNFTV- 58
+ + S I VW+QPD + F K G+ V+A+++ + +FT ++D +IR+W +
Sbjct: 74 LLSASQGKDIIVWQQPDL--KIFAKFGQGDGSVKALVSVGSKVFTAHQDSRIRVWKVSRR 131
Query: 59 -SDN-FRTKKVTTLPRRSSFLS-FSK-SNTQQ----------QHRDCVSCMAFYHAEGLL 104
S+N FR V TLP +L F K SN Q +H D +SC+A HA G++
Sbjct: 132 NSENAFRL--VDTLPTTKDYLGKFMKQSNYVQTRRNHKRLWIEHADSISCLAV-HA-GII 187
Query: 105 YTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVY 164
Y+GS+DKT+K WR+ D +C ++S AH+ +N +V DG V++ S+DG VKIW +
Sbjct: 188 YSGSWDKTLKVWRLSDLKC--LESIKAHDDAINGLVAG--DGRVYSASADGKVKIWGKEK 243
Query: 165 R---ENSHTLTMTLKFQQSSVNALA---LSSFF---DNYFLYSGSSDGSINFWEKDKMSG 215
R E++ + + +L ++++ A ++S D ++Y G SDG + WEK + G
Sbjct: 244 RKQIESTSSSSSSLHVLKATLEGRAEVSVNSVVVSGDGNWVYGGGSDGFVIGWEKKEKEG 303
Query: 216 GF 217
F
Sbjct: 304 DF 305
Score = 129 (50.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 50/217 (23%), Positives = 91/217 (41%)
Query: 1 MVFTGSSSTRIRVWRQPD--CVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTV 58
++++GS ++VWR D C+E IKA + ++A D +++ + D K++IW
Sbjct: 186 IIYSGSWDKTLKVWRLSDLKCLES--IKAHDDAINGLVAGDGRVYSASADGKVKIWG--- 240
Query: 59 SDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRV 118
+ K++ + SS L K+ + + V+ + +Y G D V W
Sbjct: 241 --KEKRKQIESTSSSSSSLHVLKATLEGRAEVSVNSVVVSGDGNWVYGGGSDGFVIGWEK 298
Query: 119 LDKRCTCVD---SFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTM-- 173
+K + F N+ + + V + S+D S+ +WRR E + L
Sbjct: 299 KEKEGDFEEWRLGFETRGHNMAVLCMCVVGEMVCSGSADKSIGLWRR---EVTGMLCKFG 355
Query: 174 TLKFQQSSVNALALS--SFFDNYFLYSGSSDGSINFW 208
+ + V L S + + LYSG D S+ W
Sbjct: 356 VIHGHEGPVKCLQASPNNVGAGFMLYSGGLDKSLRVW 392
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 225 (84.3 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 83/309 (26%), Positives = 141/309 (45%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN--MLFTTNKDCKIRIWNFTV 58
++ +GS+ T I++W + ++ V+++ N +L + + D I++WN +
Sbjct: 55 LLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWN-SA 113
Query: 59 SDNF---------RTKKVTTLPRRSSFLSF--SKSNTQQQHRDCVSCMAFYHAEGLLYTG 107
SD+ R + V P + S +T + H D V +AF LL +G
Sbjct: 114 SDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASG 173
Query: 108 SFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYREN 167
S +KT+K W C + H + V +V + D + + S+D ++K+W
Sbjct: 174 SAEKTIKLWD--SATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWD----PP 227
Query: 168 SHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHC 227
S +L TL+ + + +LA S + L SGSSD +I W D +G F H L+GH
Sbjct: 228 SGSLKHTLEGHSNKIESLAFSP--NGQLLASGSSDATIKLW--DTATGSFRHT--LKGHS 281
Query: 228 FAVLCLVAI--EKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEK 285
VL +V +L+ SGS D TI++W A G H G VR + S+E+ +
Sbjct: 282 DMVLSVVFSPDSQLLESGSGDNTIKLWDPATGILKHSMRTP-----GIVRSIEFSIELPQ 336
Query: 286 VVMGFLVYS 294
++ +S
Sbjct: 337 LITNLGTFS 345
Score = 160 (61.4 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 68/247 (27%), Positives = 103/247 (41%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQ 143
T + H D + + F LL +GS D T+K W + H S+V ++ +
Sbjct: 36 TLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLK--QTLEGHSSSVQSVAFSP 93
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTL------TMTLKFQQS------SVNAL------ 185
+ + + SSD ++K+W HT+ ++ F + ++ +L
Sbjct: 94 NGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTIEG 153
Query: 186 ----ALSSFF--DNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE-- 237
LS F D L SGS++ +I W D + G H L GH VL LV
Sbjct: 154 HSDWVLSVAFSPDGQLLASGSAEKTIKLW--DSATCGLKHT--LGGHSNWVLPLVFSPDG 209
Query: 238 KLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSL 297
+L+ SGS D TI++W G H L+GH + LA S G L+ S S
Sbjct: 210 RLLASGSNDATIKLWDPPSGSLKH----TLEGHSNKIESLAFSPN------GQLLASGSS 259
Query: 298 DQTFKVW 304
D T K+W
Sbjct: 260 DATIKLW 266
Score = 119 (46.9 bits), Expect = 0.00029, P = 0.00029
Identities = 39/115 (33%), Positives = 52/115 (45%)
Query: 192 DNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAV--LCLVAIEKLIFSGSEDTTI 249
D L SGS+D +I W D SG H L+GH + L +L+ SGS D TI
Sbjct: 208 DGRLLASGSNDATIKLW--DPPSGSLKHT--LEGHSNKIESLAFSPNGQLLASGSSDATI 263
Query: 250 RVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
++W A G H L GH V + S + + L+ S S D T K+W
Sbjct: 264 KLWDTATGSFRH----TLKGHSDMVLSVVFSPDSQ------LLESGSGDNTIKLW 308
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 217 (81.4 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 71/241 (29%), Positives = 110/241 (45%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V C+ + E ++ TGS D TV+ W V +++ + H V + + +G
Sbjct: 230 HTGSVLCLQY--DERVIVTGSSDSTVRVWDV--NTGEVLNTLIHHNEAV--LHLRFSNGL 283
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ TCS D S+ +W + TL L +++VN + FD+ ++ S S D +I
Sbjct: 284 MVTCSKDRSIAVWDMASATDI-TLRRVLVGHRAAVNVVD----FDDKYIVSASGDRTIKV 338
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVL 267
W F L GH + CL ++L+ SGS D TIR+W E G CL VL
Sbjct: 339 WSTSTCE--FVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLWD-IECGA---CLRVL 390
Query: 268 DGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQE---KTMCLDYSDYH 324
+GH VRC+ + +++V G + D KVW ++ D T+CL H
Sbjct: 391 EGHEELVRCIR--FDNKRIVSG------AYDGKIKVWDLQAALDPRAPASTLCLRTLVEH 442
Query: 325 S 325
S
Sbjct: 443 S 443
Score = 126 (49.4 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 60/225 (26%), Positives = 92/225 (40%)
Query: 100 AEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKI 159
+ GL+ T S D+++ W + + + VV+ DD ++ + S D ++K+
Sbjct: 280 SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGH-RAAVNVVDFDDKYIVSASGDRTIKV 338
Query: 160 WRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNH 219
W E TL +A + D + SGSSD +I W+ + G
Sbjct: 339 WSTSTCEFVRTLN-------GHKRGIACLQYRDR-LVVSGSSDNTIRLWDIE--CGACLR 388
Query: 220 GGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWR-------RAEGGCYHECLAVLDGHRG 272
L+GH V C+ K I SG+ D I+VW RA CL L H G
Sbjct: 389 --VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTL--CLRTLVEHSG 444
Query: 273 PVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWR-VKVMPD-QEKT 315
V L+ ++ F + SSS D T +W + V P Q +T
Sbjct: 445 RV----FRLQFDE----FQIISSSHDDTILIWDFLNVPPSAQNET 481
Score = 100 (40.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 32/130 (24%), Positives = 58/130 (44%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRC-TCVDSFVAHESNVNAIVVN 142
T H+ ++C+ + + L+ +GS D T++ W D C C+ HE V I
Sbjct: 349 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW---DIECGACLRVLEGHEELVRCI--R 401
Query: 143 QDDGFVFTCSSDGSVKIW--RRVYRENSHTLTMTLK-FQQSSVNALALSSFFDNYFLYSG 199
D+ + + + DG +K+W + + T+ L+ + S L FD + + S
Sbjct: 402 FDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQ--FDEFQIISS 459
Query: 200 SSDGSINFWE 209
S D +I W+
Sbjct: 460 SHDDTILIWD 469
Score = 66 (28.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 18/68 (26%), Positives = 32/68 (47%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN-MLFTTNKDCKIRIWNFTVS 59
++ TGSS + +RVW + E H E L N ++ T +KD I +W+ +
Sbjct: 243 VIVTGSSDSTVRVW-DVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASA 301
Query: 60 DNFRTKKV 67
+ ++V
Sbjct: 302 TDITLRRV 309
Score = 56 (24.8 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 11/65 (16%), Positives = 29/65 (44%)
Query: 2 VFTGSSSTRIRVWRQP--DCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVS 59
+ +G I++W + +C++ + G V + + ++ T + D +R+W+
Sbjct: 204 IISGLRDNSIKIWDKSSLECLK--VLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTG 261
Query: 60 DNFRT 64
+ T
Sbjct: 262 EVLNT 266
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 217 (81.4 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 71/241 (29%), Positives = 110/241 (45%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V C+ + E ++ TGS D TV+ W V +++ + H V + + +G
Sbjct: 247 HTGSVLCLQY--DERVIVTGSSDSTVRVWDV--NTGEVLNTLIHHNEAV--LHLRFSNGL 300
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ TCS D S+ +W + TL L +++VN + FD+ ++ S S D +I
Sbjct: 301 MVTCSKDRSIAVWDMASATDI-TLRRVLVGHRAAVNVVD----FDDKYIVSASGDRTIKV 355
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVL 267
W F L GH + CL ++L+ SGS D TIR+W E G CL VL
Sbjct: 356 WSTSTCE--FVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLWD-IECGA---CLRVL 407
Query: 268 DGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQE---KTMCLDYSDYH 324
+GH VRC+ + +++V G + D KVW ++ D T+CL H
Sbjct: 408 EGHEELVRCIR--FDNKRIVSG------AYDGKIKVWDLQAALDPRAPASTLCLRTLVEH 459
Query: 325 S 325
S
Sbjct: 460 S 460
Score = 126 (49.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 60/225 (26%), Positives = 92/225 (40%)
Query: 100 AEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKI 159
+ GL+ T S D+++ W + + + VV+ DD ++ + S D ++K+
Sbjct: 297 SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGH-RAAVNVVDFDDKYIVSASGDRTIKV 355
Query: 160 WRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNH 219
W E TL +A + D + SGSSD +I W+ + G
Sbjct: 356 WSTSTCEFVRTLN-------GHKRGIACLQYRDR-LVVSGSSDNTIRLWDIE--CGACLR 405
Query: 220 GGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWR-------RAEGGCYHECLAVLDGHRG 272
L+GH V C+ K I SG+ D I+VW RA CL L H G
Sbjct: 406 --VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTL--CLRTLVEHSG 461
Query: 273 PVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWR-VKVMPD-QEKT 315
V L+ ++ F + SSS D T +W + V P Q +T
Sbjct: 462 RV----FRLQFDE----FQIISSSHDDTILIWDFLNVPPSAQNET 498
Score = 100 (40.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 32/130 (24%), Positives = 58/130 (44%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRC-TCVDSFVAHESNVNAIVVN 142
T H+ ++C+ + + L+ +GS D T++ W D C C+ HE V I
Sbjct: 366 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW---DIECGACLRVLEGHEELVRCI--R 418
Query: 143 QDDGFVFTCSSDGSVKIW--RRVYRENSHTLTMTLK-FQQSSVNALALSSFFDNYFLYSG 199
D+ + + + DG +K+W + + T+ L+ + S L FD + + S
Sbjct: 419 FDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQ--FDEFQIISS 476
Query: 200 SSDGSINFWE 209
S D +I W+
Sbjct: 477 SHDDTILIWD 486
Score = 66 (28.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 18/68 (26%), Positives = 32/68 (47%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN-MLFTTNKDCKIRIWNFTVS 59
++ TGSS + +RVW + E H E L N ++ T +KD I +W+ +
Sbjct: 260 VIVTGSSDSTVRVW-DVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASA 318
Query: 60 DNFRTKKV 67
+ ++V
Sbjct: 319 TDITLRRV 326
Score = 56 (24.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 11/65 (16%), Positives = 29/65 (44%)
Query: 2 VFTGSSSTRIRVWRQP--DCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVS 59
+ +G I++W + +C++ + G V + + ++ T + D +R+W+
Sbjct: 221 IISGLRDNSIKIWDKTSLECLK--VLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTG 278
Query: 60 DNFRT 64
+ T
Sbjct: 279 EVLNT 283
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 217 (81.4 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 71/241 (29%), Positives = 110/241 (45%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V C+ + E ++ TGS D TV+ W V +++ + H V + + +G
Sbjct: 247 HTGSVLCLQY--DERVIVTGSSDSTVRVWDV--NTGEVLNTLIHHNEAV--LHLRFSNGL 300
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ TCS D S+ +W + TL L +++VN + FD+ ++ S S D +I
Sbjct: 301 MVTCSKDRSIAVWDMASATDI-TLRRVLVGHRAAVNVVD----FDDKYIVSASGDRTIKV 355
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVL 267
W F L GH + CL ++L+ SGS D TIR+W E G CL VL
Sbjct: 356 WSTSTCE--FVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLWD-IECGA---CLRVL 407
Query: 268 DGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQE---KTMCLDYSDYH 324
+GH VRC+ + +++V G + D KVW ++ D T+CL H
Sbjct: 408 EGHEELVRCIR--FDNKRIVSG------AYDGKIKVWDLQAALDPRAPASTLCLRTLVEH 459
Query: 325 S 325
S
Sbjct: 460 S 460
Score = 126 (49.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 60/225 (26%), Positives = 92/225 (40%)
Query: 100 AEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKI 159
+ GL+ T S D+++ W + + + VV+ DD ++ + S D ++K+
Sbjct: 297 SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGH-RAAVNVVDFDDKYIVSASGDRTIKV 355
Query: 160 WRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNH 219
W E TL +A + D + SGSSD +I W+ + G
Sbjct: 356 WSTSTCEFVRTLN-------GHKRGIACLQYRDR-LVVSGSSDNTIRLWDIE--CGACLR 405
Query: 220 GGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWR-------RAEGGCYHECLAVLDGHRG 272
L+GH V C+ K I SG+ D I+VW RA CL L H G
Sbjct: 406 --VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTL--CLRTLVEHSG 461
Query: 273 PVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWR-VKVMPD-QEKT 315
V L+ ++ F + SSS D T +W + V P Q +T
Sbjct: 462 RV----FRLQFDE----FQIISSSHDDTILIWDFLNVPPSAQNET 498
Score = 100 (40.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 32/130 (24%), Positives = 58/130 (44%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRC-TCVDSFVAHESNVNAIVVN 142
T H+ ++C+ + + L+ +GS D T++ W D C C+ HE V I
Sbjct: 366 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW---DIECGACLRVLEGHEELVRCI--R 418
Query: 143 QDDGFVFTCSSDGSVKIW--RRVYRENSHTLTMTLK-FQQSSVNALALSSFFDNYFLYSG 199
D+ + + + DG +K+W + + T+ L+ + S L FD + + S
Sbjct: 419 FDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQ--FDEFQIISS 476
Query: 200 SSDGSINFWE 209
S D +I W+
Sbjct: 477 SHDDTILIWD 486
Score = 66 (28.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 18/68 (26%), Positives = 32/68 (47%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN-MLFTTNKDCKIRIWNFTVS 59
++ TGSS + +RVW + E H E L N ++ T +KD I +W+ +
Sbjct: 260 VIVTGSSDSTVRVW-DVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASA 318
Query: 60 DNFRTKKV 67
+ ++V
Sbjct: 319 TDITLRRV 326
Score = 56 (24.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 11/65 (16%), Positives = 29/65 (44%)
Query: 2 VFTGSSSTRIRVWRQP--DCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVS 59
+ +G I++W + +C++ + G V + + ++ T + D +R+W+
Sbjct: 221 IISGLRDNSIKIWDKTSLECLK--VLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTG 278
Query: 60 DNFRT 64
+ T
Sbjct: 279 EVLNT 283
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 217 (81.4 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 71/241 (29%), Positives = 109/241 (45%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V C+ + E ++ TGS D TV+ W V +++ + H V + + +G
Sbjct: 252 HTGSVLCLQY--DERVIVTGSSDSTVRVWDV--NTGEVLNTLIHHNEAV--LHLRFSNGL 305
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ TCS D S+ +W TL L +++VN + FD+ ++ S S D +I
Sbjct: 306 MVTCSKDRSIAVWDMA-SPTDITLRRVLVGHRAAVNVVD----FDDKYIVSASGDRTIKV 360
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVL 267
W F L GH + CL ++L+ SGS D TIR+W E G CL VL
Sbjct: 361 WSTSTCE--FVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLWD-IECGA---CLRVL 412
Query: 268 DGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQE---KTMCLDYSDYH 324
+GH VRC+ + +++V G + D KVW ++ D T+CL H
Sbjct: 413 EGHEELVRCIR--FDNKRIVSG------AYDGKIKVWDLQAALDPRAPASTLCLRTLVEH 464
Query: 325 S 325
S
Sbjct: 465 S 465
Score = 125 (49.1 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 56/212 (26%), Positives = 86/212 (40%)
Query: 100 AEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKI 159
+ GL+ T S D+++ W + + + VV+ DD ++ + S D ++K+
Sbjct: 302 SNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGH-RAAVNVVDFDDKYIVSASGDRTIKV 360
Query: 160 WRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNH 219
W E TL +A + D + SGSSD +I W+ + G
Sbjct: 361 WSTSTCEFVRTLN-------GHKRGIACLQYRDR-LVVSGSSDNTIRLWDIE--CGACLR 410
Query: 220 GGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWR-------RAEGGCYHECLAVLDGHRG 272
L+GH V C+ K I SG+ D I+VW RA CL L H G
Sbjct: 411 --VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTL--CLRTLVEHSG 466
Query: 273 PVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
V L+ ++ F + SSS D T +W
Sbjct: 467 RV----FRLQFDE----FQIISSSHDDTILIW 490
Score = 100 (40.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 32/130 (24%), Positives = 58/130 (44%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRC-TCVDSFVAHESNVNAIVVN 142
T H+ ++C+ + + L+ +GS D T++ W D C C+ HE V I
Sbjct: 371 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW---DIECGACLRVLEGHEELVRCI--R 423
Query: 143 QDDGFVFTCSSDGSVKIW--RRVYRENSHTLTMTLK-FQQSSVNALALSSFFDNYFLYSG 199
D+ + + + DG +K+W + + T+ L+ + S L FD + + S
Sbjct: 424 FDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQ--FDEFQIISS 481
Query: 200 SSDGSINFWE 209
S D +I W+
Sbjct: 482 SHDDTILIWD 491
Score = 64 (27.6 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 18/68 (26%), Positives = 31/68 (45%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN-MLFTTNKDCKIRIWNFTVS 59
++ TGSS + +RVW + E H E L N ++ T +KD I +W+
Sbjct: 265 VIVTGSSDSTVRVW-DVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASP 323
Query: 60 DNFRTKKV 67
+ ++V
Sbjct: 324 TDITLRRV 331
Score = 56 (24.8 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 11/65 (16%), Positives = 29/65 (44%)
Query: 2 VFTGSSSTRIRVWRQP--DCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVS 59
+ +G I++W + +C++ + G V + + ++ T + D +R+W+
Sbjct: 226 IISGLRDNSIKIWDKTSLECLK--VLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTG 283
Query: 60 DNFRT 64
+ T
Sbjct: 284 EVLNT 288
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 217 (81.4 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 71/241 (29%), Positives = 110/241 (45%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V C+ + E ++ TGS D TV+ W V +++ + H V + + +G
Sbjct: 264 HTGSVLCLQY--DERVIVTGSSDSTVRVWDV--NTGEVLNTLIHHNEAV--LHLRFSNGL 317
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ TCS D S+ +W + TL L +++VN + FD+ ++ S S D +I
Sbjct: 318 MVTCSKDRSIAVWDMASATDI-TLRRVLVGHRAAVNVVD----FDDKYIVSASGDRTIKV 372
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVL 267
W F L GH + CL ++L+ SGS D TIR+W E G CL VL
Sbjct: 373 WSTSTCE--FVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLWD-IECGA---CLRVL 424
Query: 268 DGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQE---KTMCLDYSDYH 324
+GH VRC+ + +++V G + D KVW ++ D T+CL H
Sbjct: 425 EGHEELVRCIR--FDNKRIVSG------AYDGKIKVWDLQAALDPRAPASTLCLRTLVEH 476
Query: 325 S 325
S
Sbjct: 477 S 477
Score = 126 (49.4 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 60/225 (26%), Positives = 92/225 (40%)
Query: 100 AEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKI 159
+ GL+ T S D+++ W + + + VV+ DD ++ + S D ++K+
Sbjct: 314 SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGH-RAAVNVVDFDDKYIVSASGDRTIKV 372
Query: 160 WRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNH 219
W E TL +A + D + SGSSD +I W+ + G
Sbjct: 373 WSTSTCEFVRTLN-------GHKRGIACLQYRDR-LVVSGSSDNTIRLWDIE--CGACLR 422
Query: 220 GGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWR-------RAEGGCYHECLAVLDGHRG 272
L+GH V C+ K I SG+ D I+VW RA CL L H G
Sbjct: 423 --VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTL--CLRTLVEHSG 478
Query: 273 PVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWR-VKVMPD-QEKT 315
V L+ ++ F + SSS D T +W + V P Q +T
Sbjct: 479 RV----FRLQFDE----FQIISSSHDDTILIWDFLNVPPSAQNET 515
Score = 100 (40.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 32/130 (24%), Positives = 58/130 (44%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRC-TCVDSFVAHESNVNAIVVN 142
T H+ ++C+ + + L+ +GS D T++ W D C C+ HE V I
Sbjct: 383 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW---DIECGACLRVLEGHEELVRCI--R 435
Query: 143 QDDGFVFTCSSDGSVKIW--RRVYRENSHTLTMTLK-FQQSSVNALALSSFFDNYFLYSG 199
D+ + + + DG +K+W + + T+ L+ + S L FD + + S
Sbjct: 436 FDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQ--FDEFQIISS 493
Query: 200 SSDGSINFWE 209
S D +I W+
Sbjct: 494 SHDDTILIWD 503
Score = 66 (28.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 18/68 (26%), Positives = 32/68 (47%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN-MLFTTNKDCKIRIWNFTVS 59
++ TGSS + +RVW + E H E L N ++ T +KD I +W+ +
Sbjct: 277 VIVTGSSDSTVRVW-DVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASA 335
Query: 60 DNFRTKKV 67
+ ++V
Sbjct: 336 TDITLRRV 343
Score = 56 (24.8 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 11/65 (16%), Positives = 29/65 (44%)
Query: 2 VFTGSSSTRIRVWRQP--DCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVS 59
+ +G I++W + +C++ + G V + + ++ T + D +R+W+
Sbjct: 238 IISGLRDNSIKIWDKSSLECLK--VLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTG 295
Query: 60 DNFRT 64
+ T
Sbjct: 296 EVLNT 300
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 217 (81.4 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 71/241 (29%), Positives = 110/241 (45%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V C+ + E ++ TGS D TV+ W V +++ + H V + + +G
Sbjct: 266 HTGSVLCLQY--DERVIVTGSSDSTVRVWDV--NTGEVLNTLIHHNEAV--LHLRFSNGL 319
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ TCS D S+ +W + TL L +++VN + FD+ ++ S S D +I
Sbjct: 320 MVTCSKDRSIAVWDMASATDI-TLRRVLVGHRAAVNVVD----FDDKYIVSASGDRTIKV 374
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVL 267
W F L GH + CL ++L+ SGS D TIR+W E G CL VL
Sbjct: 375 WSTSTCE--FVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLWD-IECGA---CLRVL 426
Query: 268 DGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQE---KTMCLDYSDYH 324
+GH VRC+ + +++V G + D KVW ++ D T+CL H
Sbjct: 427 EGHEELVRCIR--FDNKRIVSG------AYDGKIKVWDLQAALDPRAPASTLCLRTLVEH 478
Query: 325 S 325
S
Sbjct: 479 S 479
Score = 126 (49.4 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 60/225 (26%), Positives = 92/225 (40%)
Query: 100 AEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKI 159
+ GL+ T S D+++ W + + + VV+ DD ++ + S D ++K+
Sbjct: 316 SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGH-RAAVNVVDFDDKYIVSASGDRTIKV 374
Query: 160 WRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNH 219
W E TL +A + D + SGSSD +I W+ + G
Sbjct: 375 WSTSTCEFVRTLN-------GHKRGIACLQYRDR-LVVSGSSDNTIRLWDIE--CGACLR 424
Query: 220 GGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWR-------RAEGGCYHECLAVLDGHRG 272
L+GH V C+ K I SG+ D I+VW RA CL L H G
Sbjct: 425 --VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTL--CLRTLVEHSG 480
Query: 273 PVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWR-VKVMPD-QEKT 315
V L+ ++ F + SSS D T +W + V P Q +T
Sbjct: 481 RV----FRLQFDE----FQIISSSHDDTILIWDFLNVPPSAQNET 517
Score = 100 (40.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 32/130 (24%), Positives = 58/130 (44%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRC-TCVDSFVAHESNVNAIVVN 142
T H+ ++C+ + + L+ +GS D T++ W D C C+ HE V I
Sbjct: 385 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW---DIECGACLRVLEGHEELVRCI--R 437
Query: 143 QDDGFVFTCSSDGSVKIW--RRVYRENSHTLTMTLK-FQQSSVNALALSSFFDNYFLYSG 199
D+ + + + DG +K+W + + T+ L+ + S L FD + + S
Sbjct: 438 FDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQ--FDEFQIISS 495
Query: 200 SSDGSINFWE 209
S D +I W+
Sbjct: 496 SHDDTILIWD 505
Score = 66 (28.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 18/68 (26%), Positives = 32/68 (47%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN-MLFTTNKDCKIRIWNFTVS 59
++ TGSS + +RVW + E H E L N ++ T +KD I +W+ +
Sbjct: 279 VIVTGSSDSTVRVW-DVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASA 337
Query: 60 DNFRTKKV 67
+ ++V
Sbjct: 338 TDITLRRV 345
Score = 56 (24.8 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 11/65 (16%), Positives = 29/65 (44%)
Query: 2 VFTGSSSTRIRVWRQP--DCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVS 59
+ +G I++W + +C++ + G V + + ++ T + D +R+W+
Sbjct: 240 IISGLRDNSIKIWDKTSLECLK--VLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTG 297
Query: 60 DNFRT 64
+ T
Sbjct: 298 EVLNT 302
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 217 (81.4 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 71/241 (29%), Positives = 110/241 (45%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V C+ + E ++ TGS D TV+ W V +++ + H V + + +G
Sbjct: 267 HTGSVLCLQY--DERVIVTGSSDSTVRVWDV--NTGEVLNTLIHHNEAV--LHLRFSNGL 320
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ TCS D S+ +W + TL L +++VN + FD+ ++ S S D +I
Sbjct: 321 MVTCSKDRSIAVWDMASATDI-TLRRVLVGHRAAVNVVD----FDDKYIVSASGDRTIKV 375
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVL 267
W F L GH + CL ++L+ SGS D TIR+W E G CL VL
Sbjct: 376 WSTSTCE--FVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLWD-IECGA---CLRVL 427
Query: 268 DGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQE---KTMCLDYSDYH 324
+GH VRC+ + +++V G + D KVW ++ D T+CL H
Sbjct: 428 EGHEELVRCIR--FDNKRIVSG------AYDGKIKVWDLQAALDPRAPASTLCLRTLVEH 479
Query: 325 S 325
S
Sbjct: 480 S 480
Score = 126 (49.4 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 60/225 (26%), Positives = 92/225 (40%)
Query: 100 AEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKI 159
+ GL+ T S D+++ W + + + VV+ DD ++ + S D ++K+
Sbjct: 317 SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGH-RAAVNVVDFDDKYIVSASGDRTIKV 375
Query: 160 WRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNH 219
W E TL +A + D + SGSSD +I W+ + G
Sbjct: 376 WSTSTCEFVRTLN-------GHKRGIACLQYRDR-LVVSGSSDNTIRLWDIE--CGACLR 425
Query: 220 GGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWR-------RAEGGCYHECLAVLDGHRG 272
L+GH V C+ K I SG+ D I+VW RA CL L H G
Sbjct: 426 --VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTL--CLRTLVEHSG 481
Query: 273 PVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWR-VKVMPD-QEKT 315
V L+ ++ F + SSS D T +W + V P Q +T
Sbjct: 482 RV----FRLQFDE----FQIISSSHDDTILIWDFLNVPPSAQNET 518
Score = 100 (40.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 32/130 (24%), Positives = 58/130 (44%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRC-TCVDSFVAHESNVNAIVVN 142
T H+ ++C+ + + L+ +GS D T++ W D C C+ HE V I
Sbjct: 386 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW---DIECGACLRVLEGHEELVRCI--R 438
Query: 143 QDDGFVFTCSSDGSVKIW--RRVYRENSHTLTMTLK-FQQSSVNALALSSFFDNYFLYSG 199
D+ + + + DG +K+W + + T+ L+ + S L FD + + S
Sbjct: 439 FDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQ--FDEFQIISS 496
Query: 200 SSDGSINFWE 209
S D +I W+
Sbjct: 497 SHDDTILIWD 506
Score = 66 (28.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 18/68 (26%), Positives = 32/68 (47%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN-MLFTTNKDCKIRIWNFTVS 59
++ TGSS + +RVW + E H E L N ++ T +KD I +W+ +
Sbjct: 280 VIVTGSSDSTVRVW-DVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASA 338
Query: 60 DNFRTKKV 67
+ ++V
Sbjct: 339 TDITLRRV 346
Score = 56 (24.8 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 11/65 (16%), Positives = 29/65 (44%)
Query: 2 VFTGSSSTRIRVWRQP--DCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVS 59
+ +G I++W + +C++ + G V + + ++ T + D +R+W+
Sbjct: 241 IISGLRDNSIKIWDKTSLECLK--VLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTG 298
Query: 60 DNFRT 64
+ T
Sbjct: 299 EVLNT 303
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 217 (81.4 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 71/241 (29%), Positives = 110/241 (45%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V C+ + E ++ TGS D TV+ W V +++ + H V + + +G
Sbjct: 279 HTGSVLCLQY--DERVIVTGSSDSTVRVWDV--NTGEVLNTLIHHNEAV--LHLRFSNGL 332
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ TCS D S+ +W + TL L +++VN + FD+ ++ S S D +I
Sbjct: 333 MVTCSKDRSIAVWDMASATDI-TLRRVLVGHRAAVNVVD----FDDKYIVSASGDRTIKV 387
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVL 267
W F L GH + CL ++L+ SGS D TIR+W E G CL VL
Sbjct: 388 WSTSTCE--FVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLWD-IECGA---CLRVL 439
Query: 268 DGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQE---KTMCLDYSDYH 324
+GH VRC+ + +++V G + D KVW ++ D T+CL H
Sbjct: 440 EGHEELVRCIR--FDNKRIVSG------AYDGKIKVWDLQAALDPRAPASTLCLRTLVEH 491
Query: 325 S 325
S
Sbjct: 492 S 492
Score = 126 (49.4 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 60/225 (26%), Positives = 92/225 (40%)
Query: 100 AEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKI 159
+ GL+ T S D+++ W + + + VV+ DD ++ + S D ++K+
Sbjct: 329 SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGH-RAAVNVVDFDDKYIVSASGDRTIKV 387
Query: 160 WRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNH 219
W E TL +A + D + SGSSD +I W+ + G
Sbjct: 388 WSTSTCEFVRTLN-------GHKRGIACLQYRDR-LVVSGSSDNTIRLWDIE--CGACLR 437
Query: 220 GGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWR-------RAEGGCYHECLAVLDGHRG 272
L+GH V C+ K I SG+ D I+VW RA CL L H G
Sbjct: 438 --VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTL--CLRTLVEHSG 493
Query: 273 PVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWR-VKVMPD-QEKT 315
V L+ ++ F + SSS D T +W + V P Q +T
Sbjct: 494 RV----FRLQFDE----FQIISSSHDDTILIWDFLNVPPSAQNET 530
Score = 100 (40.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 32/130 (24%), Positives = 58/130 (44%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRC-TCVDSFVAHESNVNAIVVN 142
T H+ ++C+ + + L+ +GS D T++ W D C C+ HE V I
Sbjct: 398 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW---DIECGACLRVLEGHEELVRCI--R 450
Query: 143 QDDGFVFTCSSDGSVKIW--RRVYRENSHTLTMTLK-FQQSSVNALALSSFFDNYFLYSG 199
D+ + + + DG +K+W + + T+ L+ + S L FD + + S
Sbjct: 451 FDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQ--FDEFQIISS 508
Query: 200 SSDGSINFWE 209
S D +I W+
Sbjct: 509 SHDDTILIWD 518
Score = 66 (28.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 18/68 (26%), Positives = 32/68 (47%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN-MLFTTNKDCKIRIWNFTVS 59
++ TGSS + +RVW + E H E L N ++ T +KD I +W+ +
Sbjct: 292 VIVTGSSDSTVRVW-DVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASA 350
Query: 60 DNFRTKKV 67
+ ++V
Sbjct: 351 TDITLRRV 358
Score = 56 (24.8 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 11/65 (16%), Positives = 29/65 (44%)
Query: 2 VFTGSSSTRIRVWRQP--DCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVS 59
+ +G I++W + +C++ + G V + + ++ T + D +R+W+
Sbjct: 253 IISGLRDNSIKIWDKTSLECLK--VLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTG 310
Query: 60 DNFRT 64
+ T
Sbjct: 311 EVLNT 315
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 217 (81.4 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 71/241 (29%), Positives = 110/241 (45%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V C+ + E ++ TGS D TV+ W V +++ + H V + + +G
Sbjct: 279 HTGSVLCLQY--DERVIVTGSSDSTVRVWDV--NTGEVLNTLIHHNEAV--LHLRFSNGL 332
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ TCS D S+ +W + TL L +++VN + FD+ ++ S S D +I
Sbjct: 333 MVTCSKDRSIAVWDMASATDI-TLRRVLVGHRAAVNVVD----FDDKYIVSASGDRTIKV 387
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVL 267
W F L GH + CL ++L+ SGS D TIR+W E G CL VL
Sbjct: 388 WSTSTCE--FVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLWD-IECGA---CLRVL 439
Query: 268 DGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQE---KTMCLDYSDYH 324
+GH VRC+ + +++V G + D KVW ++ D T+CL H
Sbjct: 440 EGHEELVRCIR--FDNKRIVSG------AYDGKIKVWDLQAALDPRAPASTLCLRTLVEH 491
Query: 325 S 325
S
Sbjct: 492 S 492
Score = 126 (49.4 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 60/225 (26%), Positives = 92/225 (40%)
Query: 100 AEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKI 159
+ GL+ T S D+++ W + + + VV+ DD ++ + S D ++K+
Sbjct: 329 SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGH-RAAVNVVDFDDKYIVSASGDRTIKV 387
Query: 160 WRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNH 219
W E TL +A + D + SGSSD +I W+ + G
Sbjct: 388 WSTSTCEFVRTLN-------GHKRGIACLQYRDR-LVVSGSSDNTIRLWDIE--CGACLR 437
Query: 220 GGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWR-------RAEGGCYHECLAVLDGHRG 272
L+GH V C+ K I SG+ D I+VW RA CL L H G
Sbjct: 438 --VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTL--CLRTLVEHSG 493
Query: 273 PVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWR-VKVMPD-QEKT 315
V L+ ++ F + SSS D T +W + V P Q +T
Sbjct: 494 RV----FRLQFDE----FQIISSSHDDTILIWDFLNVPPSAQNET 530
Score = 100 (40.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 32/130 (24%), Positives = 58/130 (44%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRC-TCVDSFVAHESNVNAIVVN 142
T H+ ++C+ + + L+ +GS D T++ W D C C+ HE V I
Sbjct: 398 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW---DIECGACLRVLEGHEELVRCI--R 450
Query: 143 QDDGFVFTCSSDGSVKIW--RRVYRENSHTLTMTLK-FQQSSVNALALSSFFDNYFLYSG 199
D+ + + + DG +K+W + + T+ L+ + S L FD + + S
Sbjct: 451 FDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQ--FDEFQIISS 508
Query: 200 SSDGSINFWE 209
S D +I W+
Sbjct: 509 SHDDTILIWD 518
Score = 66 (28.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 18/68 (26%), Positives = 32/68 (47%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN-MLFTTNKDCKIRIWNFTVS 59
++ TGSS + +RVW + E H E L N ++ T +KD I +W+ +
Sbjct: 292 VIVTGSSDSTVRVW-DVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASA 350
Query: 60 DNFRTKKV 67
+ ++V
Sbjct: 351 TDITLRRV 358
Score = 56 (24.8 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 11/65 (16%), Positives = 29/65 (44%)
Query: 2 VFTGSSSTRIRVWRQP--DCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVS 59
+ +G I++W + +C++ + G V + + ++ T + D +R+W+
Sbjct: 253 IISGLRDNSIKIWDKTSLECLK--VLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTG 310
Query: 60 DNFRT 64
+ T
Sbjct: 311 EVLNT 315
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 217 (81.4 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 71/241 (29%), Positives = 110/241 (45%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V C+ + E ++ TGS D TV+ W V +++ + H V + + +G
Sbjct: 279 HTGSVLCLQY--DERVIVTGSSDSTVRVWDV--NTGEVLNTLIHHNEAV--LHLRFSNGL 332
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ TCS D S+ +W + TL L +++VN + FD+ ++ S S D +I
Sbjct: 333 MVTCSKDRSIAVWDMASATDI-TLRRVLVGHRAAVNVVD----FDDKYIVSASGDRTIKV 387
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVL 267
W F L GH + CL ++L+ SGS D TIR+W E G CL VL
Sbjct: 388 WSTSTCE--FVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLWD-IECGA---CLRVL 439
Query: 268 DGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQE---KTMCLDYSDYH 324
+GH VRC+ + +++V G + D KVW ++ D T+CL H
Sbjct: 440 EGHEELVRCIR--FDNKRIVSG------AYDGKIKVWDLQAALDPRAPASTLCLRTLVEH 491
Query: 325 S 325
S
Sbjct: 492 S 492
Score = 126 (49.4 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 60/225 (26%), Positives = 92/225 (40%)
Query: 100 AEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKI 159
+ GL+ T S D+++ W + + + VV+ DD ++ + S D ++K+
Sbjct: 329 SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGH-RAAVNVVDFDDKYIVSASGDRTIKV 387
Query: 160 WRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNH 219
W E TL +A + D + SGSSD +I W+ + G
Sbjct: 388 WSTSTCEFVRTLN-------GHKRGIACLQYRDR-LVVSGSSDNTIRLWDIE--CGACLR 437
Query: 220 GGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWR-------RAEGGCYHECLAVLDGHRG 272
L+GH V C+ K I SG+ D I+VW RA CL L H G
Sbjct: 438 --VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTL--CLRTLVEHSG 493
Query: 273 PVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWR-VKVMPD-QEKT 315
V L+ ++ F + SSS D T +W + V P Q +T
Sbjct: 494 RV----FRLQFDE----FQIISSSHDDTILIWDFLNVPPSAQNET 530
Score = 100 (40.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 32/130 (24%), Positives = 58/130 (44%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRC-TCVDSFVAHESNVNAIVVN 142
T H+ ++C+ + + L+ +GS D T++ W D C C+ HE V I
Sbjct: 398 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW---DIECGACLRVLEGHEELVRCI--R 450
Query: 143 QDDGFVFTCSSDGSVKIW--RRVYRENSHTLTMTLK-FQQSSVNALALSSFFDNYFLYSG 199
D+ + + + DG +K+W + + T+ L+ + S L FD + + S
Sbjct: 451 FDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQ--FDEFQIISS 508
Query: 200 SSDGSINFWE 209
S D +I W+
Sbjct: 509 SHDDTILIWD 518
Score = 66 (28.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 18/68 (26%), Positives = 32/68 (47%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN-MLFTTNKDCKIRIWNFTVS 59
++ TGSS + +RVW + E H E L N ++ T +KD I +W+ +
Sbjct: 292 VIVTGSSDSTVRVW-DVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASA 350
Query: 60 DNFRTKKV 67
+ ++V
Sbjct: 351 TDITLRRV 358
Score = 56 (24.8 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 11/65 (16%), Positives = 29/65 (44%)
Query: 2 VFTGSSSTRIRVWRQP--DCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVS 59
+ +G I++W + +C++ + G V + + ++ T + D +R+W+
Sbjct: 253 IISGLRDNSIKIWDKSSLECLK--VLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTG 310
Query: 60 DNFRT 64
+ T
Sbjct: 311 EVLNT 315
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 215 (80.7 bits), Expect = 9.0e-15, P = 9.0e-15
Identities = 68/234 (29%), Positives = 110/234 (47%)
Query: 79 FSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAH-ESNVN 137
+S S H V C+ + + ++ +GS D TV+ W V + C+ + + H E+ ++
Sbjct: 252 YSCSRILSGHTGSVLCLQYDNR--VIISGSSDATVRVWDV--ETGECIKTLIHHCEAVLH 307
Query: 138 AIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLY 197
N G + TCS D S+ +W V + T+ L +++VN + FD+ ++
Sbjct: 308 LRFAN---GIMVTCSKDRSIAVWDMVSPRDI-TIRRVLVGHRAAVNVVD----FDDRYIV 359
Query: 198 SGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEG 257
S S D +I W D + F L GH + CL +L+ SGS D TIR+W G
Sbjct: 360 SASGDRTIKVWSMDTLE--FVRT--LAGHRRGIACLQYRGRLVVSGSSDNTIRLWDIHSG 415
Query: 258 GCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPD 311
CL VL+GH VRC+ + +++V G + D KVW ++ D
Sbjct: 416 ----VCLRVLEGHEELVRCIR--FDEKRIVSG------AYDGKIKVWDLQAALD 457
Score = 140 (54.3 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 61/219 (27%), Positives = 90/219 (41%)
Query: 94 CMAFYH---AEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFT 150
C A H A G++ T S D+++ W ++ R + + VV+ DD ++ +
Sbjct: 302 CEAVLHLRFANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGH-RAAVNVVDFDDRYIVS 360
Query: 151 CSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEK 210
S D ++K+W E TL + + L + + SGSSD +I W
Sbjct: 361 ASGDRTIKVWSMDTLE----FVRTLAGHRRGIACLQ----YRGRLVVSGSSDNTIRLW-- 410
Query: 211 DKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEG----GCYHE-CLA 265
D SG L+GH V C+ EK I SG+ D I+VW E CL
Sbjct: 411 DIHSGVCLR--VLEGHEELVRCIRFDEKRIVSGAYDGKIKVWDLQAALDPRALSSEICLC 468
Query: 266 VLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
L H G V L+ + F + SSS D T +W
Sbjct: 469 SLVQHTGRV----FRLQFDD----FQIVSSSHDDTILIW 499
Score = 120 (47.3 bits), Expect = 0.00042, P = 0.00042
Identities = 29/81 (35%), Positives = 41/81 (50%)
Query: 191 FDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIR 250
+D+ + SG D +I W++ ++ L GH +VLCL ++I SGS D T+R
Sbjct: 230 YDDDKIVSGLRDNTIKIWDRKD----YSCSRILSGHTGSVLCLQYDNRVIISGSSDATVR 285
Query: 251 VWRRAEGGCY----HECLAVL 267
VW G C H C AVL
Sbjct: 286 VWDVETGECIKTLIHHCEAVL 306
Score = 60 (26.2 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 13/64 (20%), Positives = 29/64 (45%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN-MLFTTNKDCKIRIWNFTVSD 60
+ +G I++W + D + G V L +DN ++ + + D +R+W+ +
Sbjct: 235 IVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLC-LQYDNRVIISGSSDATVRVWDVETGE 293
Query: 61 NFRT 64
+T
Sbjct: 294 CIKT 297
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 215 (80.7 bits), Expect = 9.0e-15, P = 9.0e-15
Identities = 68/234 (29%), Positives = 110/234 (47%)
Query: 79 FSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAH-ESNVN 137
+S S H V C+ + + ++ +GS D TV+ W V + C+ + + H E+ ++
Sbjct: 252 YSCSRILSGHTGSVLCLQYDNR--VIISGSSDATVRVWDV--ETGECIKTLIHHCEAVLH 307
Query: 138 AIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLY 197
N G + TCS D S+ +W V + T+ L +++VN + FD+ ++
Sbjct: 308 LRFAN---GIMVTCSKDRSIAVWDMVSPRDI-TIRRVLVGHRAAVNVVD----FDDRYIV 359
Query: 198 SGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEG 257
S S D +I W D + F L GH + CL +L+ SGS D TIR+W G
Sbjct: 360 SASGDRTIKVWSMDTLE--FVRT--LAGHRRGIACLQYRGRLVVSGSSDNTIRLWDIHSG 415
Query: 258 GCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPD 311
CL VL+GH VRC+ + +++V G + D KVW ++ D
Sbjct: 416 ----VCLRVLEGHEELVRCIR--FDEKRIVSG------AYDGKIKVWDLQAALD 457
Score = 140 (54.3 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 61/219 (27%), Positives = 90/219 (41%)
Query: 94 CMAFYH---AEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFT 150
C A H A G++ T S D+++ W ++ R + + VV+ DD ++ +
Sbjct: 302 CEAVLHLRFANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGH-RAAVNVVDFDDRYIVS 360
Query: 151 CSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEK 210
S D ++K+W E TL + + L + + SGSSD +I W
Sbjct: 361 ASGDRTIKVWSMDTLE----FVRTLAGHRRGIACLQ----YRGRLVVSGSSDNTIRLW-- 410
Query: 211 DKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEG----GCYHE-CLA 265
D SG L+GH V C+ EK I SG+ D I+VW E CL
Sbjct: 411 DIHSGVCLR--VLEGHEELVRCIRFDEKRIVSGAYDGKIKVWDLQAALDPRALSSEICLC 468
Query: 266 VLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
L H G V L+ + F + SSS D T +W
Sbjct: 469 SLVQHTGRV----FRLQFDD----FQIVSSSHDDTILIW 499
Score = 120 (47.3 bits), Expect = 0.00042, P = 0.00042
Identities = 29/81 (35%), Positives = 41/81 (50%)
Query: 191 FDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIR 250
+D+ + SG D +I W++ ++ L GH +VLCL ++I SGS D T+R
Sbjct: 230 YDDDKIVSGLRDNTIKIWDRKD----YSCSRILSGHTGSVLCLQYDNRVIISGSSDATVR 285
Query: 251 VWRRAEGGCY----HECLAVL 267
VW G C H C AVL
Sbjct: 286 VWDVETGECIKTLIHHCEAVL 306
Score = 60 (26.2 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 13/64 (20%), Positives = 29/64 (45%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN-MLFTTNKDCKIRIWNFTVSD 60
+ +G I++W + D + G V L +DN ++ + + D +R+W+ +
Sbjct: 235 IVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLC-LQYDNRVIISGSSDATVRVWDVETGE 293
Query: 61 NFRT 64
+T
Sbjct: 294 CIKT 297
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 212 (79.7 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 72/241 (29%), Positives = 108/241 (44%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V C+ + E ++ TGS D TV+ W V +++ + H V + N +G
Sbjct: 243 HTGSVLCLQY--DERVIITGSSDSTVRVWDV--NAGEMLNTLIHHCEAVLHLRFN--NGM 296
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ TCS D S+ +W TL L +++VN + FD+ ++ S S D +I
Sbjct: 297 MVTCSKDRSIAVWDMA-SPTDITLRRVLVGHRAAVNVVD----FDDKYIVSASGDRTIKV 351
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVL 267
W F L GH + CL ++L+ SGS D TIR+W E G CL VL
Sbjct: 352 WNTSTCE--FVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLWD-IECGA---CLRVL 403
Query: 268 DGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQEK---TMCLDYSDYH 324
+GH VRC+ + +++V G + D KVW + D T+CL H
Sbjct: 404 EGHEELVRCIR--FDNKRIVSG------AYDGKIKVWDLMAALDPRAPAGTLCLRTLVEH 455
Query: 325 S 325
S
Sbjct: 456 S 456
Score = 132 (51.5 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 59/221 (26%), Positives = 89/221 (40%)
Query: 94 CMAFYHAE---GLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFT 150
C A H G++ T S D+++ W + + + VV+ DD ++ +
Sbjct: 284 CEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGH-RAAVNVVDFDDKYIVS 342
Query: 151 CSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEK 210
S D ++K+W E TL +A + D + SGSSD +I W+
Sbjct: 343 ASGDRTIKVWNTSTCEFVRTLN-------GHKRGIACLQYRDR-LVVSGSSDNTIRLWDI 394
Query: 211 DKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWR-------RAEGGCYHEC 263
+ G L+GH V C+ K I SG+ D I+VW RA G C
Sbjct: 395 E--CGACLR--VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLMAALDPRAPAGTL--C 448
Query: 264 LAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
L L H G V L+ ++ F + SSS D T +W
Sbjct: 449 LRTLVEHSGRV----FRLQFDE----FQIVSSSHDDTILIW 481
Score = 98 (39.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 33/131 (25%), Positives = 58/131 (44%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRC-TCVDSFVAHESNVNAIVVN 142
T H+ ++C+ + + L+ +GS D T++ W D C C+ HE V I
Sbjct: 362 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW---DIECGACLRVLEGHEELVRCI--R 414
Query: 143 QDDGFVFTCSSDGSVKIWRRVY----RENSHTLTMTLKFQQSSVNALALSSFFDNYFLYS 198
D+ + + + DG +K+W + R + TL + + S L FD + + S
Sbjct: 415 FDNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSG-RVFRLQ--FDEFQIVS 471
Query: 199 GSSDGSINFWE 209
S D +I W+
Sbjct: 472 SSHDDTILIWD 482
Score = 69 (29.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN-MLFTTNKDCKIRIWNFTVS 59
++ TGSS + +RVW + E H E L +N M+ T +KD I +W+
Sbjct: 256 VIITGSSDSTVRVW-DVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASP 314
Query: 60 DNFRTKKV 67
+ ++V
Sbjct: 315 TDITLRRV 322
Score = 59 (25.8 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 10/63 (15%), Positives = 26/63 (41%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSDN 61
+ +G I++W + + + G V + + ++ T + D +R+W+ +
Sbjct: 217 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEM 276
Query: 62 FRT 64
T
Sbjct: 277 LNT 279
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 211 (79.3 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 70/241 (29%), Positives = 110/241 (45%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V C+ + E ++ TGS D TV+ W V +++ + H V + + +G
Sbjct: 264 HTGSVLCLQY--DERVIVTGSSDSTVRVWDVSSGEV--LNTLIHHNEAV--LHLRFCNGL 317
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ TCS D S+ +W + +L L +++VN + FD+ ++ S S D +I
Sbjct: 318 MVTCSKDRSIAVWDMASATDI-SLRRVLVGHRAAVNVVD----FDDKYIVSASGDRTIKV 372
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVL 267
W F L GH + CL ++L+ SGS D TIR+W E G CL VL
Sbjct: 373 WSTSTCE--FVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLWD-IECGA---CLRVL 424
Query: 268 DGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQE---KTMCLDYSDYH 324
+GH VRC+ + +++V G + D KVW ++ D T+CL H
Sbjct: 425 EGHEELVRCIR--FDNKRIVSG------AYDGKIKVWDLQAALDPRAPASTLCLRTLVEH 476
Query: 325 S 325
S
Sbjct: 477 S 477
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 56/210 (26%), Positives = 85/210 (40%)
Query: 102 GLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWR 161
GL+ T S D+++ W + + + VV+ DD ++ + S D ++K+W
Sbjct: 316 GLMVTCSKDRSIAVWDMASATDISLRRVLVGH-RAAVNVVDFDDKYIVSASGDRTIKVWS 374
Query: 162 RVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGG 221
E TL +A + D + SGSSD +I W+ + G
Sbjct: 375 TSTCEFVRTLN-------GHKRGIACLQYRDR-LVVSGSSDNTIRLWDIE--CGACLR-- 422
Query: 222 FLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWR-------RAEGGCYHECLAVLDGHRGPV 274
L+GH V C+ K I SG+ D I+VW RA CL L H G V
Sbjct: 423 VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTL--CLRTLVEHSGRV 480
Query: 275 RCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
L+ ++ F + SSS D T +W
Sbjct: 481 ----FRLQFDE----FQIISSSHDDTILIW 502
Score = 100 (40.3 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 32/130 (24%), Positives = 58/130 (44%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRC-TCVDSFVAHESNVNAIVVN 142
T H+ ++C+ + + L+ +GS D T++ W D C C+ HE V I
Sbjct: 383 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW---DIECGACLRVLEGHEELVRCI--R 435
Query: 143 QDDGFVFTCSSDGSVKIW--RRVYRENSHTLTMTLK-FQQSSVNALALSSFFDNYFLYSG 199
D+ + + + DG +K+W + + T+ L+ + S L FD + + S
Sbjct: 436 FDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQ--FDEFQIISS 493
Query: 200 SSDGSINFWE 209
S D +I W+
Sbjct: 494 SHDDTILIWD 503
Score = 63 (27.2 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIK---ARHGEVRAILAHDN-MLFTTNKDCKIRIWNF 56
++ TGSS + +RVW D V G + H E L N ++ T +KD I +W+
Sbjct: 277 VIVTGSSDSTVRVW---D-VSSGEVLNTLIHHNEAVLHLRFCNGLMVTCSKDRSIAVWDM 332
Query: 57 TVSDNFRTKKV 67
+ + ++V
Sbjct: 333 ASATDISLRRV 343
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 212 (79.7 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 72/241 (29%), Positives = 108/241 (44%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V C+ + E ++ TGS D TV+ W V +++ + H V + N +G
Sbjct: 342 HTGSVLCLQY--DERVIITGSSDSTVRVWDV--NAGEMLNTLIHHCEAVLHLRFN--NGM 395
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ TCS D S+ +W TL L +++VN + FD+ ++ S S D +I
Sbjct: 396 MVTCSKDRSIAVWDMA-SPTDITLRRVLVGHRAAVNVVD----FDDKYIVSASGDRTIKV 450
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVL 267
W F L GH + CL ++L+ SGS D TIR+W E G CL VL
Sbjct: 451 WNTSTCE--FVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLWD-IECGA---CLRVL 502
Query: 268 DGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQEK---TMCLDYSDYH 324
+GH VRC+ + +++V G + D KVW + D T+CL H
Sbjct: 503 EGHEELVRCIR--FDNKRIVSG------AYDGKIKVWDLMAALDPRAPAGTLCLRTLVEH 554
Query: 325 S 325
S
Sbjct: 555 S 555
Score = 132 (51.5 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 59/221 (26%), Positives = 89/221 (40%)
Query: 94 CMAFYHAE---GLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFT 150
C A H G++ T S D+++ W + + + VV+ DD ++ +
Sbjct: 383 CEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGH-RAAVNVVDFDDKYIVS 441
Query: 151 CSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEK 210
S D ++K+W E TL +A + D + SGSSD +I W+
Sbjct: 442 ASGDRTIKVWNTSTCEFVRTLN-------GHKRGIACLQYRDR-LVVSGSSDNTIRLWDI 493
Query: 211 DKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWR-------RAEGGCYHEC 263
+ G L+GH V C+ K I SG+ D I+VW RA G C
Sbjct: 494 E--CGACLR--VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLMAALDPRAPAGTL--C 547
Query: 264 LAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
L L H G V L+ ++ F + SSS D T +W
Sbjct: 548 LRTLVEHSGRV----FRLQFDE----FQIVSSSHDDTILIW 580
Score = 98 (39.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 33/131 (25%), Positives = 58/131 (44%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRC-TCVDSFVAHESNVNAIVVN 142
T H+ ++C+ + + L+ +GS D T++ W D C C+ HE V I
Sbjct: 461 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW---DIECGACLRVLEGHEELVRCI--R 513
Query: 143 QDDGFVFTCSSDGSVKIWRRVY----RENSHTLTMTLKFQQSSVNALALSSFFDNYFLYS 198
D+ + + + DG +K+W + R + TL + + S L FD + + S
Sbjct: 514 FDNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSG-RVFRLQ--FDEFQIVS 570
Query: 199 GSSDGSINFWE 209
S D +I W+
Sbjct: 571 SSHDDTILIWD 581
Score = 69 (29.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN-MLFTTNKDCKIRIWNFTVS 59
++ TGSS + +RVW + E H E L +N M+ T +KD I +W+
Sbjct: 355 VIITGSSDSTVRVW-DVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASP 413
Query: 60 DNFRTKKV 67
+ ++V
Sbjct: 414 TDITLRRV 421
Score = 59 (25.8 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 10/63 (15%), Positives = 26/63 (41%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSDN 61
+ +G I++W + + + G V + + ++ T + D +R+W+ +
Sbjct: 316 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEM 375
Query: 62 FRT 64
T
Sbjct: 376 LNT 378
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 212 (79.7 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 72/241 (29%), Positives = 108/241 (44%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V C+ + E ++ TGS D TV+ W V +++ + H V + N +G
Sbjct: 342 HTGSVLCLQY--DERVIITGSSDSTVRVWDV--NAGEMLNTLIHHCEAVLHLRFN--NGM 395
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ TCS D S+ +W TL L +++VN + FD+ ++ S S D +I
Sbjct: 396 MVTCSKDRSIAVWDMA-SPTDITLRRVLVGHRAAVNVVD----FDDKYIVSASGDRTIKV 450
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVL 267
W F L GH + CL ++L+ SGS D TIR+W E G CL VL
Sbjct: 451 WNTSTCE--FVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLWD-IECGA---CLRVL 502
Query: 268 DGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQEK---TMCLDYSDYH 324
+GH VRC+ + +++V G + D KVW + D T+CL H
Sbjct: 503 EGHEELVRCIR--FDNKRIVSG------AYDGKIKVWDLMAALDPRAPAGTLCLRTLVEH 554
Query: 325 S 325
S
Sbjct: 555 S 555
Score = 132 (51.5 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 59/221 (26%), Positives = 89/221 (40%)
Query: 94 CMAFYHAE---GLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFT 150
C A H G++ T S D+++ W + + + VV+ DD ++ +
Sbjct: 383 CEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGH-RAAVNVVDFDDKYIVS 441
Query: 151 CSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEK 210
S D ++K+W E TL +A + D + SGSSD +I W+
Sbjct: 442 ASGDRTIKVWNTSTCEFVRTLN-------GHKRGIACLQYRDR-LVVSGSSDNTIRLWDI 493
Query: 211 DKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWR-------RAEGGCYHEC 263
+ G L+GH V C+ K I SG+ D I+VW RA G C
Sbjct: 494 E--CGACLR--VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLMAALDPRAPAGTL--C 547
Query: 264 LAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
L L H G V L+ ++ F + SSS D T +W
Sbjct: 548 LRTLVEHSGRV----FRLQFDE----FQIVSSSHDDTILIW 580
Score = 98 (39.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 33/131 (25%), Positives = 58/131 (44%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRC-TCVDSFVAHESNVNAIVVN 142
T H+ ++C+ + + L+ +GS D T++ W D C C+ HE V I
Sbjct: 461 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW---DIECGACLRVLEGHEELVRCI--R 513
Query: 143 QDDGFVFTCSSDGSVKIWRRVY----RENSHTLTMTLKFQQSSVNALALSSFFDNYFLYS 198
D+ + + + DG +K+W + R + TL + + S L FD + + S
Sbjct: 514 FDNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSG-RVFRLQ--FDEFQIVS 570
Query: 199 GSSDGSINFWE 209
S D +I W+
Sbjct: 571 SSHDDTILIWD 581
Score = 69 (29.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN-MLFTTNKDCKIRIWNFTVS 59
++ TGSS + +RVW + E H E L +N M+ T +KD I +W+
Sbjct: 355 VIITGSSDSTVRVW-DVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASP 413
Query: 60 DNFRTKKV 67
+ ++V
Sbjct: 414 TDITLRRV 421
Score = 59 (25.8 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 10/63 (15%), Positives = 26/63 (41%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSDN 61
+ +G I++W + + + G V + + ++ T + D +R+W+ +
Sbjct: 316 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEM 375
Query: 62 FRT 64
T
Sbjct: 376 LNT 378
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 211 (79.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 72/241 (29%), Positives = 108/241 (44%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V C+ + E ++ TGS D TV+ W V +++ + H V + N +G
Sbjct: 301 HTGSVLCLQY--DERVIITGSSDSTVRVWDV--NTGEMLNTLIHHCEAVLHLRFN--NGM 354
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ TCS D S+ +W TL L +++VN + FD+ ++ S S D +I
Sbjct: 355 MVTCSKDRSIAVWDMA-SPTDITLRRVLVGHRAAVNVVD----FDDKYIVSASGDRTIKV 409
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVL 267
W F L GH + CL ++L+ SGS D TIR+W E G CL VL
Sbjct: 410 WNTSTCE--FVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLWD-IECGA---CLRVL 461
Query: 268 DGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQEK---TMCLDYSDYH 324
+GH VRC+ + +++V G + D KVW + D T+CL H
Sbjct: 462 EGHEELVRCIR--FDNKRIVSG------AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEH 513
Query: 325 S 325
S
Sbjct: 514 S 514
Score = 132 (51.5 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 59/221 (26%), Positives = 89/221 (40%)
Query: 94 CMAFYHAE---GLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFT 150
C A H G++ T S D+++ W + + + VV+ DD ++ +
Sbjct: 342 CEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGH-RAAVNVVDFDDKYIVS 400
Query: 151 CSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEK 210
S D ++K+W E TL +A + D + SGSSD +I W+
Sbjct: 401 ASGDRTIKVWNTSTCEFVRTLN-------GHKRGIACLQYRDR-LVVSGSSDNTIRLWDI 452
Query: 211 DKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWR-------RAEGGCYHEC 263
+ G L+GH V C+ K I SG+ D I+VW RA G C
Sbjct: 453 E--CGACLR--VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTL--C 506
Query: 264 LAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
L L H G V L+ ++ F + SSS D T +W
Sbjct: 507 LRTLVEHSGRV----FRLQFDE----FQIVSSSHDDTILIW 539
Score = 101 (40.6 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 34/131 (25%), Positives = 58/131 (44%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRC-TCVDSFVAHESNVNAIVVN 142
T H+ ++C+ + + L+ +GS D T++ W D C C+ HE V I
Sbjct: 420 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW---DIECGACLRVLEGHEELVRCI--R 472
Query: 143 QDDGFVFTCSSDGSVKIWRRVY----RENSHTLTMTLKFQQSSVNALALSSFFDNYFLYS 198
D+ + + + DG +K+W V R + TL + + S L FD + + S
Sbjct: 473 FDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSG-RVFRLQ--FDEFQIVS 529
Query: 199 GSSDGSINFWE 209
S D +I W+
Sbjct: 530 SSHDDTILIWD 540
Score = 68 (29.0 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN-MLFTTNKDCKIRIWNFTVS 59
++ TGSS + +RVW + E H E L +N M+ T +KD I +W+
Sbjct: 314 VIITGSSDSTVRVW-DVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASP 372
Query: 60 DNFRTKKV 67
+ ++V
Sbjct: 373 TDITLRRV 380
Score = 58 (25.5 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 10/63 (15%), Positives = 26/63 (41%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSDN 61
+ +G I++W + + + G V + + ++ T + D +R+W+ +
Sbjct: 275 IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEM 334
Query: 62 FRT 64
T
Sbjct: 335 LNT 337
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 211 (79.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 72/241 (29%), Positives = 108/241 (44%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V C+ + E ++ TGS D TV+ W V +++ + H V + N +G
Sbjct: 306 HTGSVLCLQY--DERVIITGSSDSTVRVWDV--NTGEMLNTLIHHCEAVLHLRFN--NGM 359
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ TCS D S+ +W TL L +++VN + FD+ ++ S S D +I
Sbjct: 360 MVTCSKDRSIAVWDMA-SPTDITLRRVLVGHRAAVNVVD----FDDKYIVSASGDRTIKV 414
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVL 267
W F L GH + CL ++L+ SGS D TIR+W E G CL VL
Sbjct: 415 WNTSTCE--FVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLWD-IECGA---CLRVL 466
Query: 268 DGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQEK---TMCLDYSDYH 324
+GH VRC+ + +++V G + D KVW + D T+CL H
Sbjct: 467 EGHEELVRCIR--FDNKRIVSG------AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEH 518
Query: 325 S 325
S
Sbjct: 519 S 519
Score = 132 (51.5 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 59/221 (26%), Positives = 89/221 (40%)
Query: 94 CMAFYHAE---GLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFT 150
C A H G++ T S D+++ W + + + VV+ DD ++ +
Sbjct: 347 CEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGH-RAAVNVVDFDDKYIVS 405
Query: 151 CSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEK 210
S D ++K+W E TL +A + D + SGSSD +I W+
Sbjct: 406 ASGDRTIKVWNTSTCEFVRTLN-------GHKRGIACLQYRDR-LVVSGSSDNTIRLWDI 457
Query: 211 DKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWR-------RAEGGCYHEC 263
+ G L+GH V C+ K I SG+ D I+VW RA G C
Sbjct: 458 E--CGACLR--VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTL--C 511
Query: 264 LAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
L L H G V L+ ++ F + SSS D T +W
Sbjct: 512 LRTLVEHSGRV----FRLQFDE----FQIVSSSHDDTILIW 544
Score = 101 (40.6 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 34/131 (25%), Positives = 58/131 (44%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRC-TCVDSFVAHESNVNAIVVN 142
T H+ ++C+ + + L+ +GS D T++ W D C C+ HE V I
Sbjct: 425 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW---DIECGACLRVLEGHEELVRCI--R 477
Query: 143 QDDGFVFTCSSDGSVKIWRRVY----RENSHTLTMTLKFQQSSVNALALSSFFDNYFLYS 198
D+ + + + DG +K+W V R + TL + + S L FD + + S
Sbjct: 478 FDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSG-RVFRLQ--FDEFQIVS 534
Query: 199 GSSDGSINFWE 209
S D +I W+
Sbjct: 535 SSHDDTILIWD 545
Score = 68 (29.0 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN-MLFTTNKDCKIRIWNFTVS 59
++ TGSS + +RVW + E H E L +N M+ T +KD I +W+
Sbjct: 319 VIITGSSDSTVRVW-DVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASP 377
Query: 60 DNFRTKKV 67
+ ++V
Sbjct: 378 TDITLRRV 385
Score = 59 (25.8 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 10/63 (15%), Positives = 26/63 (41%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSDN 61
+ +G I++W + + + G V + + ++ T + D +R+W+ +
Sbjct: 280 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEM 339
Query: 62 FRT 64
T
Sbjct: 340 LNT 342
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 210 (79.0 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 72/241 (29%), Positives = 108/241 (44%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V C+ + E ++ TGS D TV+ W V +++ + H V + N +G
Sbjct: 243 HTGSVLCLQY--DERVIITGSSDSTVRVWDV--NTGEMLNTLIHHCEAVLHLRFN--NGM 296
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ TCS D S+ +W TL L +++VN + FD+ ++ S S D +I
Sbjct: 297 MVTCSKDRSIAVWDMA-SPTDITLRRVLVGHRAAVNVVD----FDDKYIVSASGDRTIKV 351
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVL 267
W F L GH + CL ++L+ SGS D TIR+W E G CL VL
Sbjct: 352 WNTSTCE--FVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLWD-IECGA---CLRVL 403
Query: 268 DGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQEK---TMCLDYSDYH 324
+GH VRC+ + +++V G + D KVW + D T+CL H
Sbjct: 404 EGHEELVRCIR--FDNKRIVSG------AYDGKIKVWDLIAALDPRAPAGTLCLRTLVEH 455
Query: 325 S 325
S
Sbjct: 456 S 456
Score = 132 (51.5 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 59/221 (26%), Positives = 89/221 (40%)
Query: 94 CMAFYHAE---GLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFT 150
C A H G++ T S D+++ W + + + VV+ DD ++ +
Sbjct: 284 CEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGH-RAAVNVVDFDDKYIVS 342
Query: 151 CSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEK 210
S D ++K+W E TL +A + D + SGSSD +I W+
Sbjct: 343 ASGDRTIKVWNTSTCEFVRTLN-------GHKRGIACLQYRDR-LVVSGSSDNTIRLWDI 394
Query: 211 DKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWR-------RAEGGCYHEC 263
+ G L+GH V C+ K I SG+ D I+VW RA G C
Sbjct: 395 E--CGACLR--VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLIAALDPRAPAGTL--C 448
Query: 264 LAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
L L H G V L+ ++ F + SSS D T +W
Sbjct: 449 LRTLVEHSGRV----FRLQFDE----FQIVSSSHDDTILIW 481
Score = 100 (40.3 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 33/131 (25%), Positives = 58/131 (44%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRC-TCVDSFVAHESNVNAIVVN 142
T H+ ++C+ + + L+ +GS D T++ W D C C+ HE V I
Sbjct: 362 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW---DIECGACLRVLEGHEELVRCI--R 414
Query: 143 QDDGFVFTCSSDGSVKIWRRVY----RENSHTLTMTLKFQQSSVNALALSSFFDNYFLYS 198
D+ + + + DG +K+W + R + TL + + S L FD + + S
Sbjct: 415 FDNKRIVSGAYDGKIKVWDLIAALDPRAPAGTLCLRTLVEHSG-RVFRLQ--FDEFQIVS 471
Query: 199 GSSDGSINFWE 209
S D +I W+
Sbjct: 472 SSHDDTILIWD 482
Score = 68 (29.0 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN-MLFTTNKDCKIRIWNFTVS 59
++ TGSS + +RVW + E H E L +N M+ T +KD I +W+
Sbjct: 256 VIITGSSDSTVRVW-DVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASP 314
Query: 60 DNFRTKKV 67
+ ++V
Sbjct: 315 TDITLRRV 322
Score = 59 (25.8 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 10/63 (15%), Positives = 26/63 (41%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSDN 61
+ +G I++W + + + G V + + ++ T + D +R+W+ +
Sbjct: 217 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEM 276
Query: 62 FRT 64
T
Sbjct: 277 LNT 279
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 210 (79.0 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 70/241 (29%), Positives = 109/241 (45%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V C+ + E ++ TGS D TV+ W V +++ + H V + + +G
Sbjct: 264 HTGSVLCLQY--DERVIVTGSSDSTVRVWDVNSGEV--LNTLIHHNEAV--LHLRFCNGL 317
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ TCS D S+ +W +L L +++VN + FD+ ++ S S D +I
Sbjct: 318 MVTCSKDRSIAVWDMA-SPTDISLRRVLVGHRAAVNVVD----FDDKYIVSASGDRTIKV 372
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVL 267
W F L GH + CL ++L+ SGS D TIR+W E G CL VL
Sbjct: 373 WSTSTCE--FVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLWD-IECGA---CLRVL 424
Query: 268 DGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQE---KTMCLDYSDYH 324
+GH VRC+ + +++V G + D KVW ++ D T+CL H
Sbjct: 425 EGHEELVRCIR--FDNKRIVSG------AYDGKIKVWDLQAALDPRAPASTLCLRTLVEH 476
Query: 325 S 325
S
Sbjct: 477 S 477
Score = 124 (48.7 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 56/210 (26%), Positives = 85/210 (40%)
Query: 102 GLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWR 161
GL+ T S D+++ W + + + VV+ DD ++ + S D ++K+W
Sbjct: 316 GLMVTCSKDRSIAVWDMASPTDISLRRVLVGH-RAAVNVVDFDDKYIVSASGDRTIKVWS 374
Query: 162 RVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGG 221
E TL +A + D + SGSSD +I W+ + G
Sbjct: 375 TSTCEFVRTLN-------GHKRGIACLQYRDR-LVVSGSSDNTIRLWDIE--CGACLR-- 422
Query: 222 FLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWR-------RAEGGCYHECLAVLDGHRGPV 274
L+GH V C+ K I SG+ D I+VW RA CL L H G V
Sbjct: 423 VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTL--CLRTLVEHSGRV 480
Query: 275 RCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
L+ ++ F + SSS D T +W
Sbjct: 481 ----FRLQFDE----FQIISSSHDDTILIW 502
Score = 100 (40.3 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 32/130 (24%), Positives = 58/130 (44%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRC-TCVDSFVAHESNVNAIVVN 142
T H+ ++C+ + + L+ +GS D T++ W D C C+ HE V I
Sbjct: 383 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW---DIECGACLRVLEGHEELVRCI--R 435
Query: 143 QDDGFVFTCSSDGSVKIW--RRVYRENSHTLTMTLK-FQQSSVNALALSSFFDNYFLYSG 199
D+ + + + DG +K+W + + T+ L+ + S L FD + + S
Sbjct: 436 FDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQ--FDEFQIISS 493
Query: 200 SSDGSINFWE 209
S D +I W+
Sbjct: 494 SHDDTILIWD 503
Score = 61 (26.5 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 18/68 (26%), Positives = 31/68 (45%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN-MLFTTNKDCKIRIWNFTVS 59
++ TGSS + +RVW + E H E L N ++ T +KD I +W+
Sbjct: 277 VIVTGSSDSTVRVW-DVNSGEVLNTLIHHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASP 335
Query: 60 DNFRTKKV 67
+ ++V
Sbjct: 336 TDISLRRV 343
Score = 56 (24.8 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 12/65 (18%), Positives = 30/65 (46%)
Query: 2 VFTGSSSTRIRVW-RQP-DCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVS 59
+ +G I++W +Q +C++ + G V + + ++ T + D +R+W+
Sbjct: 238 IISGLRDNSIKIWDKQTLECLK--ILTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNSG 295
Query: 60 DNFRT 64
+ T
Sbjct: 296 EVLNT 300
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 211 (79.3 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 72/241 (29%), Positives = 108/241 (44%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V C+ + E ++ TGS D TV+ W V +++ + H V + N +G
Sbjct: 342 HTGSVLCLQY--DERVIITGSSDSTVRVWDV--NAGEMLNTLIHHCEAVLHLRFN--NGM 395
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ TCS D S+ +W TL L +++VN + FD+ ++ S S D +I
Sbjct: 396 MVTCSKDRSIAVWDMA-SPTDITLRRVLVGHRAAVNVVD----FDDKYIVSASGDRTIKV 450
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVL 267
W F L GH + CL ++L+ SGS D TIR+W E G CL VL
Sbjct: 451 WNTSTCE--FVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLWD-IECGA---CLRVL 502
Query: 268 DGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQEK---TMCLDYSDYH 324
+GH VRC+ + +++V G + D KVW + D T+CL H
Sbjct: 503 EGHEELVRCIR--FDNKRIVSG------AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEH 554
Query: 325 S 325
S
Sbjct: 555 S 555
Score = 132 (51.5 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 59/221 (26%), Positives = 89/221 (40%)
Query: 94 CMAFYHAE---GLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFT 150
C A H G++ T S D+++ W + + + VV+ DD ++ +
Sbjct: 383 CEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGH-RAAVNVVDFDDKYIVS 441
Query: 151 CSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEK 210
S D ++K+W E TL +A + D + SGSSD +I W+
Sbjct: 442 ASGDRTIKVWNTSTCEFVRTLN-------GHKRGIACLQYRDR-LVVSGSSDNTIRLWDI 493
Query: 211 DKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWR-------RAEGGCYHEC 263
+ G L+GH V C+ K I SG+ D I+VW RA G C
Sbjct: 494 E--CGACLR--VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTL--C 547
Query: 264 LAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
L L H G V L+ ++ F + SSS D T +W
Sbjct: 548 LRTLVEHSGRV----FRLQFDE----FQIVSSSHDDTILIW 580
Score = 101 (40.6 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 34/131 (25%), Positives = 58/131 (44%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRC-TCVDSFVAHESNVNAIVVN 142
T H+ ++C+ + + L+ +GS D T++ W D C C+ HE V I
Sbjct: 461 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW---DIECGACLRVLEGHEELVRCI--R 513
Query: 143 QDDGFVFTCSSDGSVKIWRRVY----RENSHTLTMTLKFQQSSVNALALSSFFDNYFLYS 198
D+ + + + DG +K+W V R + TL + + S L FD + + S
Sbjct: 514 FDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSG-RVFRLQ--FDEFQIVS 570
Query: 199 GSSDGSINFWE 209
S D +I W+
Sbjct: 571 SSHDDTILIWD 581
Score = 69 (29.3 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN-MLFTTNKDCKIRIWNFTVS 59
++ TGSS + +RVW + E H E L +N M+ T +KD I +W+
Sbjct: 355 VIITGSSDSTVRVW-DVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASP 413
Query: 60 DNFRTKKV 67
+ ++V
Sbjct: 414 TDITLRRV 421
Score = 58 (25.5 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 10/63 (15%), Positives = 26/63 (41%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSDN 61
+ +G I++W + + + G V + + ++ T + D +R+W+ +
Sbjct: 316 IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEM 375
Query: 62 FRT 64
T
Sbjct: 376 LNT 378
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 211 (79.3 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 72/241 (29%), Positives = 108/241 (44%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V C+ + E ++ TGS D TV+ W V +++ + H V + N +G
Sbjct: 342 HTGSVLCLQY--DERVIITGSSDSTVRVWDV--NTGEMLNTLIHHCEAVLHLRFN--NGM 395
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ TCS D S+ +W TL L +++VN + FD+ ++ S S D +I
Sbjct: 396 MVTCSKDRSIAVWDMA-SPTDITLRRVLVGHRAAVNVVD----FDDKYIVSASGDRTIKV 450
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVL 267
W F L GH + CL ++L+ SGS D TIR+W E G CL VL
Sbjct: 451 WNTSTCE--FVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLWD-IECGA---CLRVL 502
Query: 268 DGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQEK---TMCLDYSDYH 324
+GH VRC+ + +++V G + D KVW + D T+CL H
Sbjct: 503 EGHEELVRCIR--FDNKRIVSG------AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEH 554
Query: 325 S 325
S
Sbjct: 555 S 555
Score = 132 (51.5 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 59/221 (26%), Positives = 89/221 (40%)
Query: 94 CMAFYHAE---GLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFT 150
C A H G++ T S D+++ W + + + VV+ DD ++ +
Sbjct: 383 CEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGH-RAAVNVVDFDDKYIVS 441
Query: 151 CSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEK 210
S D ++K+W E TL +A + D + SGSSD +I W+
Sbjct: 442 ASGDRTIKVWNTSTCEFVRTLN-------GHKRGIACLQYRDR-LVVSGSSDNTIRLWDI 493
Query: 211 DKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWR-------RAEGGCYHEC 263
+ G L+GH V C+ K I SG+ D I+VW RA G C
Sbjct: 494 E--CGACLR--VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTL--C 547
Query: 264 LAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
L L H G V L+ ++ F + SSS D T +W
Sbjct: 548 LRTLVEHSGRV----FRLQFDE----FQIVSSSHDDTILIW 580
Score = 101 (40.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 34/131 (25%), Positives = 58/131 (44%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRC-TCVDSFVAHESNVNAIVVN 142
T H+ ++C+ + + L+ +GS D T++ W D C C+ HE V I
Sbjct: 461 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW---DIECGACLRVLEGHEELVRCI--R 513
Query: 143 QDDGFVFTCSSDGSVKIWRRVY----RENSHTLTMTLKFQQSSVNALALSSFFDNYFLYS 198
D+ + + + DG +K+W V R + TL + + S L FD + + S
Sbjct: 514 FDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSG-RVFRLQ--FDEFQIVS 570
Query: 199 GSSDGSINFWE 209
S D +I W+
Sbjct: 571 SSHDDTILIWD 581
Score = 68 (29.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN-MLFTTNKDCKIRIWNFTVS 59
++ TGSS + +RVW + E H E L +N M+ T +KD I +W+
Sbjct: 355 VIITGSSDSTVRVW-DVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASP 413
Query: 60 DNFRTKKV 67
+ ++V
Sbjct: 414 TDITLRRV 421
Score = 59 (25.8 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 10/63 (15%), Positives = 26/63 (41%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSDN 61
+ +G I++W + + + G V + + ++ T + D +R+W+ +
Sbjct: 316 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEM 375
Query: 62 FRT 64
T
Sbjct: 376 LNT 378
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 211 (79.3 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 72/241 (29%), Positives = 108/241 (44%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V C+ + E ++ TGS D TV+ W V +++ + H V + N +G
Sbjct: 342 HTGSVLCLQY--DERVIITGSSDSTVRVWDV--NTGEMLNTLIHHCEAVLHLRFN--NGM 395
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ TCS D S+ +W TL L +++VN + FD+ ++ S S D +I
Sbjct: 396 MVTCSKDRSIAVWDMA-SPTDITLRRVLVGHRAAVNVVD----FDDKYIVSASGDRTIKV 450
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVL 267
W F L GH + CL ++L+ SGS D TIR+W E G CL VL
Sbjct: 451 WNTSTCE--FVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLWD-IECGA---CLRVL 502
Query: 268 DGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQEK---TMCLDYSDYH 324
+GH VRC+ + +++V G + D KVW + D T+CL H
Sbjct: 503 EGHEELVRCIR--FDNKRIVSG------AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEH 554
Query: 325 S 325
S
Sbjct: 555 S 555
Score = 132 (51.5 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 59/221 (26%), Positives = 89/221 (40%)
Query: 94 CMAFYHAE---GLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFT 150
C A H G++ T S D+++ W + + + VV+ DD ++ +
Sbjct: 383 CEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGH-RAAVNVVDFDDKYIVS 441
Query: 151 CSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEK 210
S D ++K+W E TL +A + D + SGSSD +I W+
Sbjct: 442 ASGDRTIKVWNTSTCEFVRTLN-------GHKRGIACLQYRDR-LVVSGSSDNTIRLWDI 493
Query: 211 DKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWR-------RAEGGCYHEC 263
+ G L+GH V C+ K I SG+ D I+VW RA G C
Sbjct: 494 E--CGACLR--VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTL--C 547
Query: 264 LAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
L L H G V L+ ++ F + SSS D T +W
Sbjct: 548 LRTLVEHSGRV----FRLQFDE----FQIVSSSHDDTILIW 580
Score = 101 (40.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 34/131 (25%), Positives = 58/131 (44%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRC-TCVDSFVAHESNVNAIVVN 142
T H+ ++C+ + + L+ +GS D T++ W D C C+ HE V I
Sbjct: 461 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW---DIECGACLRVLEGHEELVRCI--R 513
Query: 143 QDDGFVFTCSSDGSVKIWRRVY----RENSHTLTMTLKFQQSSVNALALSSFFDNYFLYS 198
D+ + + + DG +K+W V R + TL + + S L FD + + S
Sbjct: 514 FDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSG-RVFRLQ--FDEFQIVS 570
Query: 199 GSSDGSINFWE 209
S D +I W+
Sbjct: 571 SSHDDTILIWD 581
Score = 68 (29.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN-MLFTTNKDCKIRIWNFTVS 59
++ TGSS + +RVW + E H E L +N M+ T +KD I +W+
Sbjct: 355 VIITGSSDSTVRVW-DVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASP 413
Query: 60 DNFRTKKV 67
+ ++V
Sbjct: 414 TDITLRRV 421
Score = 58 (25.5 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 10/63 (15%), Positives = 26/63 (41%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSDN 61
+ +G I++W + + + G V + + ++ T + D +R+W+ +
Sbjct: 316 IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEM 375
Query: 62 FRT 64
T
Sbjct: 376 LNT 378
>UNIPROTKB|E1BWK2 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031648 "protein destabilization"
evidence=IEA] [GO:0042347 "negative regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0042753 "positive regulation of
circadian rhythm" evidence=IEA] [GO:0045862 "positive regulation of
proteolysis" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 GeneTree:ENSGT00690000101849 OMA:FDQWSEA
EMBL:AADN02035964 EMBL:AADN02035965 EMBL:AADN02035966
IPI:IPI00818493 Ensembl:ENSGALT00000041199 ArrayExpress:E1BWK2
Uniprot:E1BWK2
Length = 523
Score = 209 (78.6 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 73/241 (30%), Positives = 108/241 (44%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V C+ + E ++ TGS D TV RV D V + + H N + + +G
Sbjct: 259 HTGSVLCLQY--DERVIVTGSSDSTVS--RVWDVNTGEVLNTLIHH-NEAVLHLRFSNGL 313
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ TCS D S+ +W TL L +++VN + FD+ ++ S S D +I
Sbjct: 314 MVTCSKDRSIAVWDMA-SPTDITLRRVLVGHRAAVNVVD----FDDKYIVSASGDRTIKV 368
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVL 267
W F L GH + CL ++L+ SGS D TIR+W E G CL VL
Sbjct: 369 WSTSTCE--FVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRLWD-IECGA---CLRVL 420
Query: 268 DGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQE---KTMCLDYSDYH 324
+GH VRC+ + +++V G + D KVW ++ D T+CL H
Sbjct: 421 EGHEELVRCIR--FDNKRIVSG------AYDGKIKVWDLQAALDPRAPASTLCLRTLVEH 472
Query: 325 S 325
S
Sbjct: 473 S 473
Score = 125 (49.1 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 56/212 (26%), Positives = 86/212 (40%)
Query: 100 AEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKI 159
+ GL+ T S D+++ W + + + VV+ DD ++ + S D ++K+
Sbjct: 310 SNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGH-RAAVNVVDFDDKYIVSASGDRTIKV 368
Query: 160 WRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNH 219
W E TL +A + D + SGSSD +I W+ + G
Sbjct: 369 WSTSTCEFVRTLN-------GHKRGIACLQYRDR-LVVSGSSDNTIRLWDIE--CGACLR 418
Query: 220 GGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWR-------RAEGGCYHECLAVLDGHRG 272
L+GH V C+ K I SG+ D I+VW RA CL L H G
Sbjct: 419 --VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTL--CLRTLVEHSG 474
Query: 273 PVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
V L+ ++ F + SSS D T +W
Sbjct: 475 RV----FRLQFDE----FQIISSSHDDTILIW 498
>SGD|S000002675 [details] [associations]
symbol:CIA1 "Component of cytosolic iron-sulfur protein
assembly (CIA) machinery" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal
large subunit export from nucleus" evidence=IMP] [GO:0016226
"iron-sulfur cluster assembly" evidence=IGI;IMP] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0002098 "tRNA
wobble uridine modification" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000002675 GO:GO:0005829
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BK006938 GO:GO:0016226 EMBL:U51030 GO:GO:0002098 GO:GO:0000055
HOGENOM:HOG000208901 GeneTree:ENSGT00700000104486 OMA:TAIWENI
OrthoDB:EOG4CVKH5 PIR:S70127 RefSeq:NP_010553.3 RefSeq:NP_010559.3
PDB:2HES PDBsum:2HES ProteinModelPortal:Q05583 SMR:Q05583
DIP:DIP-1836N IntAct:Q05583 MINT:MINT-405749 STRING:Q05583
PaxDb:Q05583 PeptideAtlas:Q05583 EnsemblFungi:YDR267C GeneID:851860
GeneID:851866 KEGG:sce:YDR267C KEGG:sce:YDR273W CYGD:YDR267c
EvolutionaryTrace:Q05583 NextBio:969800 Genevestigator:Q05583
GermOnline:YDR267C Uniprot:Q05583
Length = 330
Score = 201 (75.8 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 66/225 (29%), Positives = 104/225 (46%)
Query: 96 AFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSF--VAHESNVNAIVVNQDDGFVFTCSS 153
+F ++G+L TGS D+ +K V T +D AH+ + ++ + S
Sbjct: 19 SFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSF 78
Query: 154 DGSVKIWRR---VYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEK 210
D +V IW + R L ++ ++ V +A S+ D Y+L + S D S+ WE
Sbjct: 79 DSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSN--DGYYLATCSRDKSVWIWET 136
Query: 211 DKMSGGFNHGGFLQGHCFAVLCLV--AIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLD 268
D+ + LQ H V ++ E L+ S S D T+R+W+ + EC+AVL+
Sbjct: 137 DESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDW--ECVAVLN 194
Query: 269 GHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQE 313
GH G V S + +K F + S S D T +VW K M D E
Sbjct: 195 GHEGTVW----SSDFDKTEGVFRLCSGSDDSTVRVW--KYMGDDE 233
Score = 130 (50.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 55/219 (25%), Positives = 87/219 (39%)
Query: 50 KIRIWNFTVSDNFRT-----KKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLL 104
K +IW+F S +K+ + + + + H+ + +A+ LL
Sbjct: 14 KEKIWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLL 73
Query: 105 YTGSFDKTVKAWRVLDK--RCTCVDSFV---AHESNVNAIVVNQDDGFVFTCSSDGSVKI 159
GSFD TV W + R +D HE+ V + + D ++ TCS D SV I
Sbjct: 74 AAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWI 133
Query: 160 WRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNH 219
W E+ Q+ S + + L S S D ++ W KD +
Sbjct: 134 WET--DESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIW-KD-YDDDWEC 189
Query: 220 GGFLQGHCFAVLCLVAIEKL--IF---SGSEDTTIRVWR 253
L GH V +K +F SGS+D+T+RVW+
Sbjct: 190 VAVLNGHEGTVWSS-DFDKTEGVFRLCSGSDDSTVRVWK 227
Score = 113 (44.8 bits), Expect = 0.00084, P = 0.00084
Identities = 38/167 (22%), Positives = 74/167 (44%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAIL-AHDNMLFTTNKDCKIRIWN---F 56
++ GS + + +W + + +R F ++ AI+ H+N + K W+ +
Sbjct: 72 LLAAGSFDSTVSIWAKEESADRTF----EMDLLAIIEGHEN-------EVKGVAWSNDGY 120
Query: 57 TVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAW 116
++ R K V S + + Q+H V + ++ +E LL + S+D TV+ W
Sbjct: 121 YLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIW 180
Query: 117 RVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSS--DGSVKIWR 161
+ D CV HE V + ++ +G CS D +V++W+
Sbjct: 181 KDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWK 227
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 206 (77.6 bits), Expect = 5.9e-14, P = 5.9e-14
Identities = 69/239 (28%), Positives = 108/239 (45%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQ 143
T H V C+ + + ++ +GS D TV+ W V V++ + H V + N
Sbjct: 245 TLMGHTGSVLCLQY--DDKVIISGSSDSTVRVWDV--NTGEMVNTLIHHCEAVLHLRFN- 299
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
+G + TCS D S+ +W + TL L +++VN + FD ++ S S D
Sbjct: 300 -NGMMVTCSKDRSIAVWDMT-SPSEITLRRVLVGHRAAVNVVD----FDEKYIVSASGDR 353
Query: 204 SINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHEC 263
+I W F L GH + CL ++L+ SGS D +IR+W E G C
Sbjct: 354 TIKVWSTSTCE--FVRT--LNGHKRGIACLQYRDRLVVSGSSDNSIRLWD-IECGA---C 405
Query: 264 LAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQE---KTMCLD 319
L VL+GH VRC+ + +++V G + D KVW + D T+CL+
Sbjct: 406 LRVLEGHEELVRCIR--FDTKRIVSG------AYDGKIKVWDLVAALDPRAASNTLCLN 456
Score = 141 (54.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 49/170 (28%), Positives = 78/170 (45%)
Query: 83 NTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVN 142
N + ++ V C+ + +G + +G D T+K W D +C V + + H +V + +
Sbjct: 204 NCRSENSKGVYCLQY--DDGKIVSGLRDNTIKIWDRTDLQC--VKTLMGHTGSV--LCLQ 257
Query: 143 QDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSD 202
DD + + SSD +V++W N+ + TL +V L F+N + + S D
Sbjct: 258 YDDKVIISGSSDSTVRVWD----VNTGEMVNTLIHHCEAVLHLR----FNNGMMVTCSKD 309
Query: 203 GSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVW 252
SI W+ S L GH AV + EK I S S D TI+VW
Sbjct: 310 RSIAVWDMTSPSE-ITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVW 358
Score = 129 (50.5 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 61/233 (26%), Positives = 94/233 (40%)
Query: 94 CMAFYHAE---GLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFT 150
C A H G++ T S D+++ W + + + VV+ D+ ++ +
Sbjct: 290 CEAVLHLRFNNGMMVTCSKDRSIAVWDMTSPSEITLRRVLVGH-RAAVNVVDFDEKYIVS 348
Query: 151 CSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEK 210
S D ++K+W E TL +A + D + SGSSD SI W+
Sbjct: 349 ASGDRTIKVWSTSTCEFVRTLN-------GHKRGIACLQYRDR-LVVSGSSDNSIRLWDI 400
Query: 211 DKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWR-------RAEGGCYHEC 263
+ G L+GH V C+ K I SG+ D I+VW RA C
Sbjct: 401 E--CGACLR--VLEGHEELVRCIRFDTKRIVSGAYDGKIKVWDLVAALDPRAASNTL--C 454
Query: 264 LAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWR-VKVMPDQEKT 315
L L H G V L+ ++ F + SSS D T +W + P++ KT
Sbjct: 455 LNTLVEHTGRV----FRLQFDE----FQIVSSSHDDTILIWDFLNFTPNENKT 499
Score = 99 (39.9 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 33/131 (25%), Positives = 58/131 (44%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRC-TCVDSFVAHESNVNAIVVN 142
T H+ ++C+ + + L+ +GS D +++ W D C C+ HE V I
Sbjct: 368 TLNGHKRGIACLQY--RDRLVVSGSSDNSIRLW---DIECGACLRVLEGHEELVRCI--R 420
Query: 143 QDDGFVFTCSSDGSVKIWRRVY----RENSHTLTMTLKFQQSSVNALALSSFFDNYFLYS 198
D + + + DG +K+W V R S+TL + + + L FD + + S
Sbjct: 421 FDTKRIVSGAYDGKIKVWDLVAALDPRAASNTLCLNTLVEHTG-RVFRLQ--FDEFQIVS 477
Query: 199 GSSDGSINFWE 209
S D +I W+
Sbjct: 478 SSHDDTILIWD 488
Score = 70 (29.7 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN-MLFTTNKDCKIRIWNFTVS 59
++ +GSS + +RVW + E H E L +N M+ T +KD I +W+ T
Sbjct: 262 VIISGSSDSTVRVW-DVNTGEMVNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMTSP 320
Query: 60 DNFRTKKV 67
++V
Sbjct: 321 SEITLRRV 328
Score = 63 (27.2 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 13/65 (20%), Positives = 29/65 (44%)
Query: 2 VFTGSSSTRIRVWRQPD--CVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVS 59
+ +G I++W + D CV+ + G V + D ++ + + D +R+W+
Sbjct: 223 IVSGLRDNTIKIWDRTDLQCVKT--LMGHTGSVLCLQYDDKVIISGSSDSTVRVWDVNTG 280
Query: 60 DNFRT 64
+ T
Sbjct: 281 EMVNT 285
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 204 (76.9 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 67/232 (28%), Positives = 109/232 (46%)
Query: 88 HRD-CVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDG 146
H D ++CM + + +L TGS D T+K W +DK + + V H V ++Q
Sbjct: 254 HEDHVITCMQIH--DDVLVTGSDDNTLKVW-CIDKG-EVMYTLVGHTGGVWTSQISQCGR 309
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
++ + S+D +VK+W V +L TL+ S+V +A++ L +GS D ++
Sbjct: 310 YIVSGSTDRTVKVWSTV----DGSLLHTLQGHTSTVRCMAMAGSI----LVTGSRDTTLR 361
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAV 266
W+ + SG H L GH AV C+ + SG D T+++W G C+
Sbjct: 362 VWDVE--SG--RHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTG----RCIRT 413
Query: 267 LDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQEKTMCL 318
L GH V L E E+ + V S SLD + +VW P+ ++ + L
Sbjct: 414 LTGHNNRVYSLL--FESERSI----VCSGSLDTSIRVWDF-TRPEGQECVAL 458
Score = 171 (65.3 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 71/228 (31%), Positives = 100/228 (43%)
Query: 83 NTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVN 142
+T Q H V CMA A +L TGS D T++ W V R + H + V +
Sbjct: 332 HTLQGHTSTVRCMAM--AGSILVTGSRDTTLRVWDVESGRHLA--TLHGHHAAVRCV--- 384
Query: 143 QDDGF-VFTCSSDGSVKIWRRVYRENSHT--LTMTLKFQQSSVNALALSSFFDNYFLYSG 199
Q DG V + D +VKIW N+HT TL + V +L S + + SG
Sbjct: 385 QFDGTTVVSGGYDFTVKIW------NAHTGRCIRTLTGHNNRVYSLLFES--ERSIVCSG 436
Query: 200 SSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGC 259
S D SI W+ + G LQGH + ++ S + D+ +RVW EG C
Sbjct: 437 SLDTSIRVWDFTRPEGQ-ECVALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGTC 495
Query: 260 YHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
H +L GHR + SL+ M V +SS D T K+W ++
Sbjct: 496 VH----MLSGHRSAI----TSLQWFGRNM---VATSSDDGTVKLWDIE 532
Score = 160 (61.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 59/195 (30%), Positives = 81/195 (41%)
Query: 110 DKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSH 169
DK K W + V HE +V + DD V T S D ++K+W E +
Sbjct: 234 DKIEKNWNANPIMGSAV--LRGHEDHVITCMQIHDDVLV-TGSDDNTLKVWCIDKGEVMY 290
Query: 170 TLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFA 229
TL V +S ++ SGS+D ++ W + G H LQGH
Sbjct: 291 TLVG----HTGGVWTSQISQC--GRYIVSGSTDRTVKVWST--VDGSLLHT--LQGHTST 340
Query: 230 VLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMG 289
V C+ ++ +GS DTT+RVW E G + LA L GH VRC+ G
Sbjct: 341 VRCMAMAGSILVTGSRDTTLRVWD-VESGRH---LATLHGHHAAVRCVQFD--------G 388
Query: 290 FLVYSSSLDQTFKVW 304
V S D T K+W
Sbjct: 389 TTVVSGGYDFTVKIW 403
Score = 133 (51.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 51/210 (24%), Positives = 90/210 (42%)
Query: 84 TQQQHRDCVSCMAFYHAEGL-LYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVN 142
T H V C+ F +G + +G +D TVK W RC + + H + V +++
Sbjct: 373 TLHGHHAAVRCVQF---DGTTVVSGGYDFTVKIWNAHTGRC--IRTLTGHNNRVYSLLFE 427
Query: 143 QDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSD 202
+ V + S D S+++W E + + L+ S + + L N L S ++D
Sbjct: 428 SERSIVCSGSLDTSIRVWDFTRPEGQECVAL-LQGHTSLTSGMQLRG---N-ILVSCNAD 482
Query: 203 GSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK-LIFSGSEDTTIRVWRRAEGGCYH 261
+ W D G H L GH A+ L + ++ + S+D T+++W G
Sbjct: 483 SHVRVW--DIHEGTCVH--MLSGHRSAITSLQWFGRNMVATSSDDGTVKLWDIERGALIR 538
Query: 262 ECLAVLD--GHRGPVRCLAASLEMEKVVMG 289
+ L LD G+ G + L ++ M +G
Sbjct: 539 D-LVTLDSGGNGGCIWRLCSTSTMLACAVG 567
Score = 62 (26.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 12/54 (22%), Positives = 27/54 (50%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWN 55
+ +GS+ ++VW D ++ VR + ++L T ++D +R+W+
Sbjct: 311 IVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWD 364
Score = 42 (19.8 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 38 HDNMLFTTNKDCKIRIW 54
HD++L T + D +++W
Sbjct: 265 HDDVLVTGSDDNTLKVW 281
Score = 41 (19.5 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERG 23
++ TGS ++VW C+++G
Sbjct: 268 VLVTGSDDNTLKVW----CIDKG 286
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 204 (76.9 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 67/232 (28%), Positives = 109/232 (46%)
Query: 88 HRD-CVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDG 146
H D ++CM + + +L TGS D T+K W +DK + + V H V ++Q
Sbjct: 254 HEDHVITCMQIH--DDVLVTGSDDNTLKVW-CIDKG-EVMYTLVGHTGGVWTSQISQCGR 309
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
++ + S+D +VK+W V +L TL+ S+V +A++ L +GS D ++
Sbjct: 310 YIVSGSTDRTVKVWSTV----DGSLLHTLQGHTSTVRCMAMAGSI----LVTGSRDTTLR 361
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAV 266
W+ + SG H L GH AV C+ + SG D T+++W G C+
Sbjct: 362 VWDVE--SG--RHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTG----RCIRT 413
Query: 267 LDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQEKTMCL 318
L GH V L E E+ + V S SLD + +VW P+ ++ + L
Sbjct: 414 LTGHNNRVYSLL--FESERSI----VCSGSLDTSIRVWDF-TRPEGQECVAL 458
Score = 171 (65.3 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 71/228 (31%), Positives = 100/228 (43%)
Query: 83 NTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVN 142
+T Q H V CMA A +L TGS D T++ W V R + H + V +
Sbjct: 332 HTLQGHTSTVRCMAM--AGSILVTGSRDTTLRVWDVESGRHLA--TLHGHHAAVRCV--- 384
Query: 143 QDDGF-VFTCSSDGSVKIWRRVYRENSHT--LTMTLKFQQSSVNALALSSFFDNYFLYSG 199
Q DG V + D +VKIW N+HT TL + V +L S + + SG
Sbjct: 385 QFDGTTVVSGGYDFTVKIW------NAHTGRCIRTLTGHNNRVYSLLFES--ERSIVCSG 436
Query: 200 SSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGC 259
S D SI W+ + G LQGH + ++ S + D+ +RVW EG C
Sbjct: 437 SLDTSIRVWDFTRPEGQ-ECVALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGTC 495
Query: 260 YHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
H +L GHR + SL+ M V +SS D T K+W ++
Sbjct: 496 VH----MLSGHRSAI----TSLQWFGRNM---VATSSDDGTVKLWDIE 532
Score = 160 (61.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 59/195 (30%), Positives = 81/195 (41%)
Query: 110 DKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSH 169
DK K W + V HE +V + DD V T S D ++K+W E +
Sbjct: 234 DKIEKNWNANPIMGSAV--LRGHEDHVITCMQIHDDVLV-TGSDDNTLKVWCIDKGEVMY 290
Query: 170 TLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFA 229
TL V +S ++ SGS+D ++ W + G H LQGH
Sbjct: 291 TLVG----HTGGVWTSQISQC--GRYIVSGSTDRTVKVWST--VDGSLLHT--LQGHTST 340
Query: 230 VLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMG 289
V C+ ++ +GS DTT+RVW E G + LA L GH VRC+ G
Sbjct: 341 VRCMAMAGSILVTGSRDTTLRVWD-VESGRH---LATLHGHHAAVRCVQFD--------G 388
Query: 290 FLVYSSSLDQTFKVW 304
V S D T K+W
Sbjct: 389 TTVVSGGYDFTVKIW 403
Score = 133 (51.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 51/210 (24%), Positives = 90/210 (42%)
Query: 84 TQQQHRDCVSCMAFYHAEGL-LYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVN 142
T H V C+ F +G + +G +D TVK W RC + + H + V +++
Sbjct: 373 TLHGHHAAVRCVQF---DGTTVVSGGYDFTVKIWNAHTGRC--IRTLTGHNNRVYSLLFE 427
Query: 143 QDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSD 202
+ V + S D S+++W E + + L+ S + + L N L S ++D
Sbjct: 428 SERSIVCSGSLDTSIRVWDFTRPEGQECVAL-LQGHTSLTSGMQLRG---N-ILVSCNAD 482
Query: 203 GSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK-LIFSGSEDTTIRVWRRAEGGCYH 261
+ W D G H L GH A+ L + ++ + S+D T+++W G
Sbjct: 483 SHVRVW--DIHEGTCVH--MLSGHRSAITSLQWFGRNMVATSSDDGTVKLWDIERGALIR 538
Query: 262 ECLAVLD--GHRGPVRCLAASLEMEKVVMG 289
+ L LD G+ G + L ++ M +G
Sbjct: 539 D-LVTLDSGGNGGCIWRLCSTSTMLACAVG 567
Score = 62 (26.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 12/54 (22%), Positives = 27/54 (50%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWN 55
+ +GS+ ++VW D ++ VR + ++L T ++D +R+W+
Sbjct: 311 IVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWD 364
Score = 42 (19.8 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 38 HDNMLFTTNKDCKIRIW 54
HD++L T + D +++W
Sbjct: 265 HDDVLVTGSDDNTLKVW 281
Score = 41 (19.5 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERG 23
++ TGS ++VW C+++G
Sbjct: 268 VLVTGSDDNTLKVW----CIDKG 286
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 140 (54.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 53/195 (27%), Positives = 84/195 (43%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
HR+C++ + F+ + L+ + S D T+K W + H + V I ++
Sbjct: 105 HRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFE--RTLKGHTNAVQDIDFDKTGNL 162
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ +CS+D ++K+W ++ TL +V+ + + D L S S D +I
Sbjct: 163 LASCSADLTIKLWDF----QTYDCVKTLHGHDHNVSCVRFTPSGDQ--LISSSRDKTIKV 216
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KLIFSGSEDTTIRVWRRAEGGCYHECLA 265
WE + G+ L GH V + E I S S D TI+ W +G ECLA
Sbjct: 217 WEA---ATGYCIKT-LVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKG----ECLA 268
Query: 266 VLDGHRGPVRCLAAS 280
H V CLA S
Sbjct: 269 TYREHSHVVECLAFS 283
Score = 138 (53.6 bits), Expect = 5.5e-13, Sum P(3) = 5.5e-13
Identities = 35/114 (30%), Positives = 55/114 (48%)
Query: 76 FLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESN 135
F ++ T H VSC+ F + L + S DKT+K W C + + V HE
Sbjct: 177 FQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYC--IKTLVGHEDW 234
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIWRRV-------YRENSHTLTMTLKFQQSSV 182
V I V++D + +CS+D ++K W V YRE+SH + L F +++
Sbjct: 235 VRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVEC-LAFSTANI 287
Score = 85 (35.0 bits), Expect = 5.5e-13, Sum P(3) = 5.5e-13
Identities = 30/116 (25%), Positives = 49/116 (42%)
Query: 195 FLYSGSSDGSINFWEKDK---MSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRV 251
+L +GS D +I WE ++ H +++ F C K + S +D TIRV
Sbjct: 318 YLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHP-C----GKFLLSVGDDKTIRV 372
Query: 252 WRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
W A+G C + + H + CL L + G +D KVW+++
Sbjct: 373 WDIAQGRCIK---TINEAHTHFISCLDFCLHNPHIATG------GVDDVIKVWKLQ 419
Score = 55 (24.4 bits), Expect = 5.5e-13, Sum P(3) = 5.5e-13
Identities = 17/69 (24%), Positives = 30/69 (43%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHD-----NMLFTTNKDCKIRIWN 55
++ + S I+VW D F + G A+ D N+L + + D I++W+
Sbjct: 120 LMVSASEDATIKVW---DFESGEFERTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWD 176
Query: 56 FTVSDNFRT 64
F D +T
Sbjct: 177 FQTYDCVKT 185
Score = 46 (21.3 bits), Expect = 4.5e-12, Sum P(3) = 4.5e-12
Identities = 9/48 (18%), Positives = 24/48 (50%)
Query: 21 ERGFIKARHGEVRAILAHDN--MLFTTNKDCKIRIWNFTVSDNFRTKK 66
E+ + + ++ H + ++ + ++D I++W+F + RT K
Sbjct: 98 EKHILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLK 145
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 194 (73.4 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 62/202 (30%), Positives = 98/202 (48%)
Query: 104 LYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWR-R 162
L++GS DKT+K W + K C + +H V + ++ ++F+ S+D ++K+W +
Sbjct: 555 LFSGSSDKTIKVWDL--KTLECKYTLESHARAVKTLCISGQ--YLFSGSNDKTIKVWDLK 610
Query: 163 VYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGF 222
+R N TLK V + + N LYSGS D +I W +
Sbjct: 611 TFRCN-----YTLKGHTKWVTTICILG--TN--LYSGSYDKTIRVWNLKSLECSAT---- 657
Query: 223 LQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLE 282
L+GH V +V +KL+F+ S+D TI++W C L+GH V+CLA E
Sbjct: 658 LRGHDRWVEHMVICDKLLFTASDDNTIKIWDLET----LRCNTTLEGHNATVQCLAV-WE 712
Query: 283 MEKVVMGFLVYSSSLDQTFKVW 304
+K V+ S S DQ+ +VW
Sbjct: 713 DKKCVI-----SCSHDQSIRVW 729
Score = 180 (68.4 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 48/152 (31%), Positives = 75/152 (49%)
Query: 101 EGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW 160
+ LL+TG D +++ + + CV + HE V +I N D ++F+ SSD S+K+W
Sbjct: 470 DNLLFTGCSDNSIRVYDYKSQNMECVQTLKGHEGPVESICYN--DQYLFSGSSDHSIKVW 527
Query: 161 RRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHG 220
TL+ V+ + L+ D Y L+SGSSD +I W+ + +
Sbjct: 528 DL----KKLRCIFTLEGHDKPVHTVLLN---DKY-LFSGSSDKTIKVWDLKTLECKYT-- 577
Query: 221 GFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVW 252
L+ H AV L + +FSGS D TI+VW
Sbjct: 578 --LESHARAVKTLCISGQYLFSGSNDKTIKVW 607
Score = 180 (68.4 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 52/163 (31%), Positives = 81/163 (49%)
Query: 145 DGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGS 204
D +FT SD S++++ Y+ + TLK + V ++ +++ +L+SGSSD S
Sbjct: 470 DNLLFTGCSDNSIRVYD--YKSQNMECVQTLKGHEGPVESIC----YNDQYLFSGSSDHS 523
Query: 205 INFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECL 264
I W+ K+ F L+GH V ++ +K +FSGS D TI+VW EC
Sbjct: 524 IKVWDLKKLRCIFT----LEGHDKPVHTVLLNDKYLFSGSSDKTIKVWDLKT----LECK 575
Query: 265 AVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
L+ H V+ L S G ++S S D+T KVW +K
Sbjct: 576 YTLESHARAVKTLCIS--------GQYLFSGSNDKTIKVWDLK 610
Score = 137 (53.3 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 69/276 (25%), Positives = 115/276 (41%)
Query: 1 MVFTGSSSTRIRVW----RQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWN- 55
++FTG S IRV+ + +CV+ +K G V +I +D LF+ + D I++W+
Sbjct: 472 LLFTGCSDNSIRVYDYKSQNMECVQT--LKGHEGPVESICYNDQYLFSGSSDHSIKVWDL 529
Query: 56 ------FTVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFY----HAEG--- 102
FT+ + K V T+ +L S+ + D + Y HA
Sbjct: 530 KKLRCIFTLEGH--DKPVHTVLLNDKYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKT 587
Query: 103 LLYTGSF---DKTVKAWRVLD-KRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVK 158
L +G + K +V D K C + H V I + + +++ S D +++
Sbjct: 588 LCISGQYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILGTN--LYSGSYDKTIR 645
Query: 159 IWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFN 218
+W E S TL+ V + + D L++ S D +I W+ + +
Sbjct: 646 VWNLKSLECS----ATLRGHDRWVEHMVIC---DK-LLFTASDDNTIKIWDLETLRCNTT 697
Query: 219 HGGFLQGHCFAVLCLVAIE--KLIFSGSEDTTIRVW 252
L+GH V CL E K + S S D +IRVW
Sbjct: 698 ----LEGHNATVQCLAVWEDKKCVISCSHDQSIRVW 729
Score = 127 (49.8 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 36/113 (31%), Positives = 54/113 (47%)
Query: 195 FLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRR 254
+L+SGSSD +I W+ + + L+ H AV L + +FSGS D TI+VW
Sbjct: 554 YLFSGSSDKTIKVWDLKTLECKYT----LESHARAVKTLCISGQYLFSGSNDKTIKVWDL 609
Query: 255 AEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
C + L GH V + ++G +YS S D+T +VW +K
Sbjct: 610 KTFRCNY----TLKGHTKWVTTIC--------ILGTNLYSGSYDKTIRVWNLK 650
Score = 45 (20.9 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 39 DNMLFTTNKDCKIRIWNF 56
DN+LFT D IR++++
Sbjct: 470 DNLLFTGCSDNSIRVYDY 487
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 176 (67.0 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 69/248 (27%), Positives = 107/248 (43%)
Query: 76 FLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESN 135
F F T H VS +A + + S DKT+K W V + CV +F H
Sbjct: 114 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREW 171
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYRENSHTLTMTLKFQQSSVNALALS 188
V + NQD + +CS+D +V++W + RE+ H + +SS ++++ +
Sbjct: 172 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEA 231
Query: 189 SFFDNY-------FLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KL 239
+ + FL SGS D +I W+ +S G L GH V ++ K
Sbjct: 232 TGSETKKSGKPGPFLLSGSRDKTIKMWD---VSTGMCLMT-LVGHDNWVRGVLFHSGGKF 287
Query: 240 IFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQ 299
I S ++D T+RVW C+ L+ H V SL+ K V + S+DQ
Sbjct: 288 ILSCADDKTLRVWDYKN----KRCMKTLNAHEHFV----TSLDFHKTAP--YVVTGSVDQ 337
Query: 300 TFKVWRVK 307
T KVW +
Sbjct: 338 TVKVWECR 345
Score = 116 (45.9 bits), Expect = 0.00042, P = 0.00042
Identities = 61/236 (25%), Positives = 97/236 (41%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVD-SFVAHESNVNAIVVNQDDG 146
HR V+ + F+ ++ + S D T+K W D + + H +V I +
Sbjct: 42 HRSPVTRVIFHPVFSVMVSASEDATIKVW---DYETGDFERTLKGHTDSVQDISFDHSGK 98
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
+ +CS+D ++K+W T+ +V+++A+ D+ + S S D +I
Sbjct: 99 LLASCSADMTIKLWDF----QGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIK 152
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK--LIFSGSEDTTIRVWRRAEGGCYHECL 264
WE + G+ F GH V + + LI S S D T+RVW A EC
Sbjct: 153 MWE---VQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT----KECK 204
Query: 265 AVLDGHRGPVRCL-------------AASLEMEKVVM-GFLVYSSSLDQTFKVWRV 306
A L H V C+ A E +K G + S S D+T K+W V
Sbjct: 205 AELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 260
Score = 104 (41.7 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 61/288 (21%), Positives = 119/288 (41%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQ 143
T + H D V ++F H+ LL + S D T+K W + C+ + H+ NV+++ +
Sbjct: 80 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDF--QGFECIRTMHGHDHNVSSVAIMP 137
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
+ + + S D ++K+W + + + T + V + + D + S S+D
Sbjct: 138 NGDHIVSASRDKTIKMWEV---QTGYCVK-TFTGHREWVRMVRPNQ--DGTLIASCSNDQ 191
Query: 204 SINFW---EKDKMSGGFNHGGFLQGHCFAV-LCLVAIEK--------------LIFSGSE 245
++ W K+ + H ++ +A +I + + SGS
Sbjct: 192 TVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSR 251
Query: 246 DTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWR 305
D TI++W + G CL L GH VR + G + S + D+T +VW
Sbjct: 252 DKTIKMWDVSTG----MCLMTLVGHDNWVRGVLFHSG------GKFILSCADDKTLRVW- 300
Query: 306 VKVMPDQEKTMCLDYSDYHSNSKTTTTKMDY-EMSPVLSPSWVEKKMK 352
D + C+ + H + T +D+ + +P + V++ +K
Sbjct: 301 -----DYKNKRCMKTLNAHEHF---VTSLDFHKTAPYVVTGSVDQTVK 340
Score = 51 (23.0 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 21 ERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKK 66
E+ + V ++ H +++ + ++D I++W++ D RT K
Sbjct: 35 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK 82
Score = 46 (21.3 bits), Expect = 6.8e-12, Sum P(2) = 6.8e-12
Identities = 17/67 (25%), Positives = 30/67 (44%)
Query: 1 MVFTGSSSTRIRVWR-QPDCVERGFIKARHGEVRAI-LAHDNMLFTT-NKDCKIRIWNFT 57
++ + S I+VW + ER +K V+ I H L + + D I++W+F
Sbjct: 57 VMVSASEDATIKVWDYETGDFERT-LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 115
Query: 58 VSDNFRT 64
+ RT
Sbjct: 116 GFECIRT 122
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 191 (72.3 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 67/242 (27%), Positives = 109/242 (45%)
Query: 80 SKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAI 139
S +T + H D V + F H LL + S D TVK W + + H V ++
Sbjct: 329 SLQHTLEGHSDLVRSVIFSHDSRLLASAS-DSTVKIWDT--GTGSLQHTLEGHRDWVRSV 385
Query: 140 VVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSG 199
+ + D + + S D +VKIW + +L TL+ + V ++ S D+ L S
Sbjct: 386 IFSHDSQLLASASDDSTVKIWDT----GTGSLQHTLEGHRDWVRSVIFSH--DSQLLASA 439
Query: 200 SSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KLIFSGSEDTTIRVWRRAEG 257
S D ++ W D +G H L+GH V ++ +L+ S S+D T+R+W +G
Sbjct: 440 SDDSTVKIW--DTGTGSLQHT--LEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKG 495
Query: 258 GCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQEKTMC 317
H L+GH V ++ S + L+ S+S DQT ++W ++ Q T
Sbjct: 496 SHKH----TLEGHSSLVTSVSFSHDSR------LLASASNDQTVRIWDIEARSLQH-TFD 544
Query: 318 LD 319
LD
Sbjct: 545 LD 546
Score = 166 (63.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 53/195 (27%), Positives = 91/195 (46%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V +++ H LL + S D+TVK W + + + H V +++ + D
Sbjct: 295 HEAAVLSVSYSHDSRLLASASDDRTVKIWDT--ETGSLQHTLEGHSDLVRSVIFSHDSRL 352
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ + +SD +VKIW + +L TL+ + V ++ S D+ L S S D ++
Sbjct: 353 LAS-ASDSTVKIWDT----GTGSLQHTLEGHRDWVRSVIFSH--DSQLLASASDDSTVKI 405
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KLIFSGSEDTTIRVWRRAEGGCYHECLA 265
W D +G H L+GH V ++ +L+ S S+D+T+++W G H
Sbjct: 406 W--DTGTGSLQHT--LEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQH---- 457
Query: 266 VLDGHRGPVRCLAAS 280
L+GHR VR + S
Sbjct: 458 TLEGHRDWVRSVIFS 472
Score = 137 (53.3 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 44/158 (27%), Positives = 75/158 (47%)
Query: 125 CVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNA 184
C+ + HE+ V ++ + D + + S D +VKIW + +L TL+ V +
Sbjct: 288 CLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDT----ETGSLQHTLEGHSDLVRS 343
Query: 185 LALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KLIFS 242
+ S D+ L S +SD ++ W D +G H L+GH V ++ +L+ S
Sbjct: 344 VIFSH--DSRLLAS-ASDSTVKIW--DTGTGSLQHT--LEGHRDWVRSVIFSHDSQLLAS 396
Query: 243 GSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAAS 280
S+D+T+++W G H L+GHR VR + S
Sbjct: 397 ASDDSTVKIWDTGTGSLQH----TLEGHRDWVRSVIFS 430
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 176 (67.0 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 69/248 (27%), Positives = 107/248 (43%)
Query: 76 FLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESN 135
F F T H VS +A + + S DKT+K W V + CV +F H
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREW 236
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYRENSHTLTMTLKFQQSSVNALALS 188
V + NQD + +CS+D +V++W + RE+ H + +SS ++++ +
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEA 296
Query: 189 SFFDNY-------FLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KL 239
+ + FL SGS D +I W+ +S G L GH V ++ K
Sbjct: 297 TGSETKKSGKPGPFLLSGSRDKTIKMWD---VSTGMCLMT-LVGHDNWVRGVLFHSGGKF 352
Query: 240 IFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQ 299
I S ++D T+RVW C+ L+ H V SL+ K V + S+DQ
Sbjct: 353 ILSCADDKTLRVWDYKN----KRCMKTLNAHEHFV----TSLDFHKTAP--YVVTGSVDQ 402
Query: 300 TFKVWRVK 307
T KVW +
Sbjct: 403 TVKVWECR 410
Score = 116 (45.9 bits), Expect = 0.00057, P = 0.00057
Identities = 61/236 (25%), Positives = 97/236 (41%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVD-SFVAHESNVNAIVVNQDDG 146
HR V+ + F+ ++ + S D T+K W D + + H +V I +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVW---DYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
+ +CS+D ++K+W T+ +V+++A+ D+ + S S D +I
Sbjct: 164 LLASCSADMTIKLWDF----QGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIK 217
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK--LIFSGSEDTTIRVWRRAEGGCYHECL 264
WE + G+ F GH V + + LI S S D T+RVW A EC
Sbjct: 218 MWE---VQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT----KECK 269
Query: 265 AVLDGHRGPVRCL-------------AASLEMEKVVM-GFLVYSSSLDQTFKVWRV 306
A L H V C+ A E +K G + S S D+T K+W V
Sbjct: 270 AELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325
Score = 51 (23.0 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 21 ERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKK 66
E+ + V ++ H +++ + ++D I++W++ D RT K
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK 147
Score = 46 (21.3 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 17/67 (25%), Positives = 30/67 (44%)
Query: 1 MVFTGSSSTRIRVWR-QPDCVERGFIKARHGEVRAI-LAHDNMLFTT-NKDCKIRIWNFT 57
++ + S I+VW + ER +K V+ I H L + + D I++W+F
Sbjct: 122 VMVSASEDATIKVWDYETGDFERT-LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 58 VSDNFRT 64
+ RT
Sbjct: 181 GFECIRT 187
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 176 (67.0 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 69/248 (27%), Positives = 107/248 (43%)
Query: 76 FLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESN 135
F F T H VS +A + + S DKT+K W V + CV +F H
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREW 236
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYRENSHTLTMTLKFQQSSVNALALS 188
V + NQD + +CS+D +V++W + RE+ H + +SS ++++ +
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEA 296
Query: 189 SFFDNY-------FLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KL 239
+ + FL SGS D +I W+ +S G L GH V ++ K
Sbjct: 297 TGSETKKSGKPGPFLLSGSRDKTIKMWD---VSTGMCLMT-LVGHDNWVRGVLFHSGGKF 352
Query: 240 IFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQ 299
I S ++D T+RVW C+ L+ H V SL+ K V + S+DQ
Sbjct: 353 ILSCADDKTLRVWDYKN----KRCMKTLNAHEHFV----TSLDFHKTAP--YVVTGSVDQ 402
Query: 300 TFKVWRVK 307
T KVW +
Sbjct: 403 TVKVWECR 410
Score = 116 (45.9 bits), Expect = 0.00057, P = 0.00057
Identities = 61/236 (25%), Positives = 97/236 (41%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVD-SFVAHESNVNAIVVNQDDG 146
HR V+ + F+ ++ + S D T+K W D + + H +V I +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVW---DYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
+ +CS+D ++K+W T+ +V+++A+ D+ + S S D +I
Sbjct: 164 LLASCSADMTIKLWDF----QGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIK 217
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK--LIFSGSEDTTIRVWRRAEGGCYHECL 264
WE + G+ F GH V + + LI S S D T+RVW A EC
Sbjct: 218 MWE---VQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT----KECK 269
Query: 265 AVLDGHRGPVRCL-------------AASLEMEKVVM-GFLVYSSSLDQTFKVWRV 306
A L H V C+ A E +K G + S S D+T K+W V
Sbjct: 270 AELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325
Score = 51 (23.0 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 21 ERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKK 66
E+ + V ++ H +++ + ++D I++W++ D RT K
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK 147
Score = 46 (21.3 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 17/67 (25%), Positives = 30/67 (44%)
Query: 1 MVFTGSSSTRIRVWR-QPDCVERGFIKARHGEVRAI-LAHDNMLFTT-NKDCKIRIWNFT 57
++ + S I+VW + ER +K V+ I H L + + D I++W+F
Sbjct: 122 VMVSASEDATIKVWDYETGDFERT-LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 58 VSDNFRT 64
+ RT
Sbjct: 181 GFECIRT 187
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 176 (67.0 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 69/248 (27%), Positives = 107/248 (43%)
Query: 76 FLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESN 135
F F T H VS +A + + S DKT+K W V + CV +F H
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREW 236
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYRENSHTLTMTLKFQQSSVNALALS 188
V + NQD + +CS+D +V++W + RE+ H + +SS ++++ +
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEA 296
Query: 189 SFFDNY-------FLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KL 239
+ + FL SGS D +I W+ +S G L GH V ++ K
Sbjct: 297 TGSETKKSGKPGPFLLSGSRDKTIKMWD---VSTGMCLMT-LVGHDNWVRGVLFHSGGKF 352
Query: 240 IFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQ 299
I S ++D T+RVW C+ L+ H V SL+ K V + S+DQ
Sbjct: 353 ILSCADDKTLRVWDYKN----KRCMKTLNAHEHFV----TSLDFHKTAP--YVVTGSVDQ 402
Query: 300 TFKVWRVK 307
T KVW +
Sbjct: 403 TVKVWECR 410
Score = 116 (45.9 bits), Expect = 0.00057, P = 0.00057
Identities = 61/236 (25%), Positives = 97/236 (41%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVD-SFVAHESNVNAIVVNQDDG 146
HR V+ + F+ ++ + S D T+K W D + + H +V I +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVW---DYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
+ +CS+D ++K+W T+ +V+++A+ D+ + S S D +I
Sbjct: 164 LLASCSADMTIKLWDF----QGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIK 217
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK--LIFSGSEDTTIRVWRRAEGGCYHECL 264
WE + G+ F GH V + + LI S S D T+RVW A EC
Sbjct: 218 MWE---VQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT----KECK 269
Query: 265 AVLDGHRGPVRCL-------------AASLEMEKVVM-GFLVYSSSLDQTFKVWRV 306
A L H V C+ A E +K G + S S D+T K+W V
Sbjct: 270 AELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325
Score = 51 (23.0 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 21 ERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKK 66
E+ + V ++ H +++ + ++D I++W++ D RT K
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK 147
Score = 46 (21.3 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 17/67 (25%), Positives = 30/67 (44%)
Query: 1 MVFTGSSSTRIRVWR-QPDCVERGFIKARHGEVRAI-LAHDNMLFTT-NKDCKIRIWNFT 57
++ + S I+VW + ER +K V+ I H L + + D I++W+F
Sbjct: 122 VMVSASEDATIKVWDYETGDFERT-LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 58 VSDNFRT 64
+ RT
Sbjct: 181 GFECIRT 187
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 176 (67.0 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 69/248 (27%), Positives = 107/248 (43%)
Query: 76 FLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESN 135
F F T H VS +A + + S DKT+K W V + CV +F H
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREW 236
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYRENSHTLTMTLKFQQSSVNALALS 188
V + NQD + +CS+D +V++W + RE+ H + +SS ++++ +
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEA 296
Query: 189 SFFDNY-------FLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KL 239
+ + FL SGS D +I W+ +S G L GH V ++ K
Sbjct: 297 TGSETKKSGKPGPFLLSGSRDKTIKMWD---VSTGMCLMT-LVGHDNWVRGVLFHSGGKF 352
Query: 240 IFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQ 299
I S ++D T+RVW C+ L+ H V SL+ K V + S+DQ
Sbjct: 353 ILSCADDKTLRVWDYKN----KRCMKTLNAHEHFV----TSLDFHKTAP--YVVTGSVDQ 402
Query: 300 TFKVWRVK 307
T KVW +
Sbjct: 403 TVKVWECR 410
Score = 116 (45.9 bits), Expect = 0.00057, P = 0.00057
Identities = 61/236 (25%), Positives = 97/236 (41%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVD-SFVAHESNVNAIVVNQDDG 146
HR V+ + F+ ++ + S D T+K W D + + H +V I +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVW---DYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
+ +CS+D ++K+W T+ +V+++A+ D+ + S S D +I
Sbjct: 164 LLASCSADMTIKLWDF----QGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIK 217
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK--LIFSGSEDTTIRVWRRAEGGCYHECL 264
WE + G+ F GH V + + LI S S D T+RVW A EC
Sbjct: 218 MWE---VQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT----KECK 269
Query: 265 AVLDGHRGPVRCL-------------AASLEMEKVVM-GFLVYSSSLDQTFKVWRV 306
A L H V C+ A E +K G + S S D+T K+W V
Sbjct: 270 AELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325
Score = 51 (23.0 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 21 ERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKK 66
E+ + V ++ H +++ + ++D I++W++ D RT K
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK 147
Score = 46 (21.3 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 17/67 (25%), Positives = 30/67 (44%)
Query: 1 MVFTGSSSTRIRVWR-QPDCVERGFIKARHGEVRAI-LAHDNMLFTT-NKDCKIRIWNFT 57
++ + S I+VW + ER +K V+ I H L + + D I++W+F
Sbjct: 122 VMVSASEDATIKVWDYETGDFERT-LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 58 VSDNFRT 64
+ RT
Sbjct: 181 GFECIRT 187
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 176 (67.0 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 69/248 (27%), Positives = 107/248 (43%)
Query: 76 FLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESN 135
F F T H VS +A + + S DKT+K W V + CV +F H
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREW 236
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYRENSHTLTMTLKFQQSSVNALALS 188
V + NQD + +CS+D +V++W + RE+ H + +SS ++++ +
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEA 296
Query: 189 SFFDNY-------FLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KL 239
+ + FL SGS D +I W+ +S G L GH V ++ K
Sbjct: 297 TGSETKKSGKPGPFLLSGSRDKTIKMWD---VSTGMCLMT-LVGHDNWVRGVLFHSGGKF 352
Query: 240 IFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQ 299
I S ++D T+RVW C+ L+ H V SL+ K V + S+DQ
Sbjct: 353 ILSCADDKTLRVWDYKN----KRCMKTLNAHEHFV----TSLDFHKTAP--YVVTGSVDQ 402
Query: 300 TFKVWRVK 307
T KVW +
Sbjct: 403 TVKVWECR 410
Score = 116 (45.9 bits), Expect = 0.00057, P = 0.00057
Identities = 61/236 (25%), Positives = 97/236 (41%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVD-SFVAHESNVNAIVVNQDDG 146
HR V+ + F+ ++ + S D T+K W D + + H +V I +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVW---DYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
+ +CS+D ++K+W T+ +V+++A+ D+ + S S D +I
Sbjct: 164 LLASCSADMTIKLWDF----QGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIK 217
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK--LIFSGSEDTTIRVWRRAEGGCYHECL 264
WE + G+ F GH V + + LI S S D T+RVW A EC
Sbjct: 218 MWE---VQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT----KECK 269
Query: 265 AVLDGHRGPVRCL-------------AASLEMEKVVM-GFLVYSSSLDQTFKVWRV 306
A L H V C+ A E +K G + S S D+T K+W V
Sbjct: 270 AELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325
Score = 51 (23.0 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 21 ERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKK 66
E+ + V ++ H +++ + ++D I++W++ D RT K
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK 147
Score = 46 (21.3 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 17/67 (25%), Positives = 30/67 (44%)
Query: 1 MVFTGSSSTRIRVWR-QPDCVERGFIKARHGEVRAI-LAHDNMLFTT-NKDCKIRIWNFT 57
++ + S I+VW + ER +K V+ I H L + + D I++W+F
Sbjct: 122 VMVSASEDATIKVWDYETGDFERT-LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 58 VSDNFRT 64
+ RT
Sbjct: 181 GFECIRT 187
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 176 (67.0 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 69/248 (27%), Positives = 107/248 (43%)
Query: 76 FLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESN 135
F F T H VS +A + + S DKT+K W V + CV +F H
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREW 236
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYRENSHTLTMTLKFQQSSVNALALS 188
V + NQD + +CS+D +V++W + RE+ H + +SS ++++ +
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEA 296
Query: 189 SFFDNY-------FLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KL 239
+ + FL SGS D +I W+ +S G L GH V ++ K
Sbjct: 297 TGSETKKSGKPGPFLLSGSRDKTIKMWD---VSTGMCLMT-LVGHDNWVRGVLFHSGGKF 352
Query: 240 IFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQ 299
I S ++D T+RVW C+ L+ H V SL+ K V + S+DQ
Sbjct: 353 ILSCADDKTLRVWDYKN----KRCMKTLNAHEHFV----TSLDFHKTAP--YVVTGSVDQ 402
Query: 300 TFKVWRVK 307
T KVW +
Sbjct: 403 TVKVWECR 410
Score = 116 (45.9 bits), Expect = 0.00057, P = 0.00057
Identities = 61/236 (25%), Positives = 97/236 (41%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVD-SFVAHESNVNAIVVNQDDG 146
HR V+ + F+ ++ + S D T+K W D + + H +V I +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVW---DYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
+ +CS+D ++K+W T+ +V+++A+ D+ + S S D +I
Sbjct: 164 LLASCSADMTIKLWDF----QGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIK 217
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK--LIFSGSEDTTIRVWRRAEGGCYHECL 264
WE + G+ F GH V + + LI S S D T+RVW A EC
Sbjct: 218 MWE---VQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT----KECK 269
Query: 265 AVLDGHRGPVRCL-------------AASLEMEKVVM-GFLVYSSSLDQTFKVWRV 306
A L H V C+ A E +K G + S S D+T K+W V
Sbjct: 270 AELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325
Score = 51 (23.0 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 21 ERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKK 66
E+ + V ++ H +++ + ++D I++W++ D RT K
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK 147
Score = 46 (21.3 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 17/67 (25%), Positives = 30/67 (44%)
Query: 1 MVFTGSSSTRIRVWR-QPDCVERGFIKARHGEVRAI-LAHDNMLFTT-NKDCKIRIWNFT 57
++ + S I+VW + ER +K V+ I H L + + D I++W+F
Sbjct: 122 VMVSASEDATIKVWDYETGDFERT-LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 58 VSDNFRT 64
+ RT
Sbjct: 181 GFECIRT 187
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 176 (67.0 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 69/248 (27%), Positives = 107/248 (43%)
Query: 76 FLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESN 135
F F T H VS +A + + S DKT+K W V + CV +F H
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREW 236
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYRENSHTLTMTLKFQQSSVNALALS 188
V + NQD + +CS+D +V++W + RE+ H + +SS ++++ +
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEA 296
Query: 189 SFFDNY-------FLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KL 239
+ + FL SGS D +I W+ +S G L GH V ++ K
Sbjct: 297 TGSETKKSGKPGPFLLSGSRDKTIKMWD---VSTGMCLMT-LVGHDNWVRGVLFHSGGKF 352
Query: 240 IFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQ 299
I S ++D T+RVW C+ L+ H V SL+ K V + S+DQ
Sbjct: 353 ILSCADDKTLRVWDYKN----KRCMKTLNAHEHFV----TSLDFHKTAP--YVVTGSVDQ 402
Query: 300 TFKVWRVK 307
T KVW +
Sbjct: 403 TVKVWECR 410
Score = 116 (45.9 bits), Expect = 0.00057, P = 0.00057
Identities = 61/236 (25%), Positives = 97/236 (41%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVD-SFVAHESNVNAIVVNQDDG 146
HR V+ + F+ ++ + S D T+K W D + + H +V I +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVW---DYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
+ +CS+D ++K+W T+ +V+++A+ D+ + S S D +I
Sbjct: 164 LLASCSADMTIKLWDF----QGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIK 217
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK--LIFSGSEDTTIRVWRRAEGGCYHECL 264
WE + G+ F GH V + + LI S S D T+RVW A EC
Sbjct: 218 MWE---VQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT----KECK 269
Query: 265 AVLDGHRGPVRCL-------------AASLEMEKVVM-GFLVYSSSLDQTFKVWRV 306
A L H V C+ A E +K G + S S D+T K+W V
Sbjct: 270 AELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325
Score = 51 (23.0 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 21 ERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKK 66
E+ + V ++ H +++ + ++D I++W++ D RT K
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK 147
Score = 46 (21.3 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 17/67 (25%), Positives = 30/67 (44%)
Query: 1 MVFTGSSSTRIRVWR-QPDCVERGFIKARHGEVRAI-LAHDNMLFTT-NKDCKIRIWNFT 57
++ + S I+VW + ER +K V+ I H L + + D I++W+F
Sbjct: 122 VMVSASEDATIKVWDYETGDFERT-LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 58 VSDNFRT 64
+ RT
Sbjct: 181 GFECIRT 187
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 176 (67.0 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 69/248 (27%), Positives = 107/248 (43%)
Query: 76 FLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESN 135
F F T H VS +A + + S DKT+K W V + CV +F H
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREW 236
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYRENSHTLTMTLKFQQSSVNALALS 188
V + NQD + +CS+D +V++W + RE+ H + +SS ++++ +
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEA 296
Query: 189 SFFDNY-------FLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KL 239
+ + FL SGS D +I W+ +S G L GH V ++ K
Sbjct: 297 TGSETKKSGKPGPFLLSGSRDKTIKMWD---VSTGMCLMT-LVGHDNWVRGVLFHSGGKF 352
Query: 240 IFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQ 299
I S ++D T+RVW C+ L+ H V SL+ K V + S+DQ
Sbjct: 353 ILSCADDKTLRVWDYKN----KRCMKTLNAHEHFV----TSLDFHKTAP--YVVTGSVDQ 402
Query: 300 TFKVWRVK 307
T KVW +
Sbjct: 403 TVKVWECR 410
Score = 116 (45.9 bits), Expect = 0.00057, P = 0.00057
Identities = 61/236 (25%), Positives = 97/236 (41%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVD-SFVAHESNVNAIVVNQDDG 146
HR V+ + F+ ++ + S D T+K W D + + H +V I +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVW---DYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
+ +CS+D ++K+W T+ +V+++A+ D+ + S S D +I
Sbjct: 164 LLASCSADMTIKLWDF----QGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIK 217
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK--LIFSGSEDTTIRVWRRAEGGCYHECL 264
WE + G+ F GH V + + LI S S D T+RVW A EC
Sbjct: 218 MWE---VQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT----KECK 269
Query: 265 AVLDGHRGPVRCL-------------AASLEMEKVVM-GFLVYSSSLDQTFKVWRV 306
A L H V C+ A E +K G + S S D+T K+W V
Sbjct: 270 AELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325
Score = 51 (23.0 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 21 ERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKK 66
E+ + V ++ H +++ + ++D I++W++ D RT K
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK 147
Score = 46 (21.3 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 17/67 (25%), Positives = 30/67 (44%)
Query: 1 MVFTGSSSTRIRVWR-QPDCVERGFIKARHGEVRAI-LAHDNMLFTT-NKDCKIRIWNFT 57
++ + S I+VW + ER +K V+ I H L + + D I++W+F
Sbjct: 122 VMVSASEDATIKVWDYETGDFERT-LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 58 VSDNFRT 64
+ RT
Sbjct: 181 GFECIRT 187
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 176 (67.0 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 69/248 (27%), Positives = 107/248 (43%)
Query: 76 FLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESN 135
F F T H VS +A + + S DKT+K W V + CV +F H
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREW 236
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYRENSHTLTMTLKFQQSSVNALALS 188
V + NQD + +CS+D +V++W + RE+ H + +SS ++++ +
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEA 296
Query: 189 SFFDNY-------FLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KL 239
+ + FL SGS D +I W+ +S G L GH V ++ K
Sbjct: 297 TGSETKKSGKPGPFLLSGSRDKTIKMWD---VSTGMCLMT-LVGHDNWVRGVLFHSGGKF 352
Query: 240 IFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQ 299
I S ++D T+RVW C+ L+ H V SL+ K V + S+DQ
Sbjct: 353 ILSCADDKTLRVWDYKN----KRCMKTLNAHEHFV----TSLDFHKTAP--YVVTGSVDQ 402
Query: 300 TFKVWRVK 307
T KVW +
Sbjct: 403 TVKVWECR 410
Score = 116 (45.9 bits), Expect = 0.00057, P = 0.00057
Identities = 61/236 (25%), Positives = 97/236 (41%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVD-SFVAHESNVNAIVVNQDDG 146
HR V+ + F+ ++ + S D T+K W D + + H +V I +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVW---DYETGDFERTLKGHTDSVEDISFDHSGK 163
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
+ +CS+D ++K+W T+ +V+++A+ D+ + S S D +I
Sbjct: 164 LLASCSADMTIKLWDF----QGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIK 217
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK--LIFSGSEDTTIRVWRRAEGGCYHECL 264
WE + G+ F GH V + + LI S S D T+RVW A EC
Sbjct: 218 MWE---VQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT----KECK 269
Query: 265 AVLDGHRGPVRCL-------------AASLEMEKVVM-GFLVYSSSLDQTFKVWRV 306
A L H V C+ A E +K G + S S D+T K+W V
Sbjct: 270 AELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325
Score = 51 (23.0 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 21 ERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKK 66
E+ + V ++ H +++ + ++D I++W++ D RT K
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK 147
Score = 45 (20.9 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 17/67 (25%), Positives = 29/67 (43%)
Query: 1 MVFTGSSSTRIRVWR-QPDCVERGFIKARHGEVRAI-LAHDNMLFTT-NKDCKIRIWNFT 57
++ + S I+VW + ER +K V I H L + + D I++W+F
Sbjct: 122 VMVSASEDATIKVWDYETGDFERT-LKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 58 VSDNFRT 64
+ RT
Sbjct: 181 GFECIRT 187
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 180 (68.4 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 59/231 (25%), Positives = 100/231 (43%)
Query: 77 LSFSKS-NTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESN 135
LS KS T + H + V C F L+ +GSFD++V+ W V +C + + AH
Sbjct: 143 LSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC--LKTLPAHSDP 200
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYF 195
V+A+ N+D + + S DG +IW + TL + V+ + S + +
Sbjct: 201 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL---IDDDNPPVSFVKFSP--NGKY 255
Query: 196 LYSGSSDGSINFWEKDKMSGGFNHGGFL-QGHCFAVLCLVAIEKLIFSGSEDTTIRVWRR 254
+ + + D ++ W+ K + G + +C V K I SGSED + +W
Sbjct: 256 ILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNL 315
Query: 255 AEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWR 305
E + L GH V C A E ++ + + D+T K+W+
Sbjct: 316 QS----KEVVQKLQGHTDTVLCTACH-PTENIIASAALEN---DKTIKLWK 358
Score = 122 (48.0 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 52/221 (23%), Positives = 89/221 (40%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H+ +S +A+ LL +GS DKT+K W + + + + H + V N
Sbjct: 113 HKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKS--LKTLKGHSNYVFCCNFNPQSNL 170
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ + S D SV+IW + TL V+A+ + D + S S DG
Sbjct: 171 IVSGSFDESVRIWD----VRTGKCLKTLPAHSDPVSAVHFNR--DGSLIVSSSYDGLCRI 224
Query: 208 WEKDKMSGGFNHGGFLQGHC-FAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAV 266
W D SG + + + K I + + D T+++W ++G +CL
Sbjct: 225 W--DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG----KCLKT 278
Query: 267 LDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
GH+ C+ A+ V G + S S D +W ++
Sbjct: 279 YTGHKNEKYCIFANFS---VTGGKWIVSGSEDNMVYIWNLQ 316
Score = 115 (45.5 bits), Expect = 0.00060, P = 0.00060
Identities = 42/160 (26%), Positives = 72/160 (45%)
Query: 150 TCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWE 209
T SS+ S + + ++TL TL +V+A+ S + +L S S+D I W
Sbjct: 43 TTSSNSSASNKSSLSVKPNYTLKFTLAGHTKAVSAVKFSP--NGEWLASSSADKLIKIW- 99
Query: 210 KDKMSGGFNHGGFLQGHCFAV--LCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVL 267
G F + GH + + + +L+ SGS+D T++VW + G + L L
Sbjct: 100 -GAYDGKFEKT--ISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTG----KSLKTL 152
Query: 268 DGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
GH V C + + +V G S D++ ++W V+
Sbjct: 153 KGHSNYVFCCNFNPQSNLIVSG------SFDESVRIWDVR 186
Score = 43 (20.2 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 13/65 (20%), Positives = 28/65 (43%)
Query: 4 TGSSSTRIRVWRQPDC-VERGFIKARHGEVRAILAHDNMLFTTNKDCK-IRIWNFTVSDN 61
+ S+ I++W D E+ + G + D+ L + D K +++W + +
Sbjct: 89 SSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKS 148
Query: 62 FRTKK 66
+T K
Sbjct: 149 LKTLK 153
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 175 (66.7 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 69/246 (28%), Positives = 107/246 (43%)
Query: 78 SFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVN 137
S+ T H VS +AF A + + S D+T+K W V C V ++ H V
Sbjct: 182 SYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYC--VKTYTGHREWVR 239
Query: 138 AIVVNQDDGFVFTCSSDGSVKIWR------RV-YRENSHTLTMTLKFQQSSVNALALSSF 190
+ V+ + TCS+D ++++W +V R++ HT+ +++ +A+ ++
Sbjct: 240 MVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAG 299
Query: 191 FDNY-------FLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAV--LCLVAIEKLIF 241
DN FL SGS D +I W+ +S G L GH V L K +
Sbjct: 300 ADNKKGHHQGPFLASGSRDKTIRIWD---VSVGLCLLT-LSGHDNWVRGLAFHPGGKYLV 355
Query: 242 SGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTF 301
S S+D TIRVW C+ L H+ S++ K V S S+DQT
Sbjct: 356 SASDDKTIRVWDLRN----KRCMKTLYAHQH----FCTSIDFHKAHP--YVISGSVDQTV 405
Query: 302 KVWRVK 307
KVW +
Sbjct: 406 KVWECR 411
Score = 132 (51.5 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 60/237 (25%), Positives = 101/237 (42%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
HR ++ + F+ L+ + S D T++ W + S H +V + +
Sbjct: 107 HRASITRVIFHPIFALMVSASEDATIRIWDF--ETGEYERSLKGHTDSVQDVAFDAQGKL 164
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ +CS+D S+K+W + S+ T+ +V+++A D ++ S S D +I
Sbjct: 165 LASCSADLSIKLWDF---QQSYECIKTMHGHDHNVSSVAFVPAGD--YVLSASRDRTIKM 219
Query: 208 WEKDKMSGGFNHGGFLQGHCFAV-LCLVAIEKLIFSG-SEDTTIRVWRRAEGGCYHECLA 265
WE ++ G+ + GH V + V IE IF+ S D TIRVW C E
Sbjct: 220 WE---VATGYCVKTYT-GHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVE--- 272
Query: 266 VLDGHRGPVRCLA-----ASLEMEKVV---------MGFLVYSSSLDQTFKVWRVKV 308
L H V C+A A+ + + G + S S D+T ++W V V
Sbjct: 273 -LRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSV 328
Score = 51 (23.0 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 15/62 (24%), Positives = 29/62 (46%)
Query: 1 MVFTGSSSTRIRVWR-QPDCVERGFIKARHGEVRAIL--AHDNMLFTTNKDCKIRIWNFT 57
++ + S IR+W + ER +K V+ + A +L + + D I++W+F
Sbjct: 122 LMVSASEDATIRIWDFETGEYERS-LKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQ 180
Query: 58 VS 59
S
Sbjct: 181 QS 182
Score = 48 (22.0 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 10/48 (20%), Positives = 23/48 (47%)
Query: 21 ERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKK 66
E+ + + ++ H ++ + ++D IRIW+F + R+ K
Sbjct: 100 EKFSLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLK 147
>UNIPROTKB|G8JKX8 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:DAAA02002931 EMBL:DAAA02002930 EMBL:DAAA02002932
Ensembl:ENSBTAT00000019767 Uniprot:G8JKX8
Length = 713
Score = 190 (71.9 bits), Expect = 7.4e-12, P = 7.4e-12
Identities = 61/247 (24%), Positives = 106/247 (42%)
Query: 48 DCKIRIWNFTVSDNFRTKKVTTLPRRS-SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYT 106
D +R F N+ + R ++ + + + + H D + C+A + + + T
Sbjct: 28 DLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILT 87
Query: 107 GSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSS-DGSVKIWRRVYR 165
S D +K W DK+ +C F H V IV+N D F +S D ++K+W+
Sbjct: 88 SSDDMLIKLWD-WDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQL--- 143
Query: 166 ENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQG 225
S + TL+ + VN + S D +L SG+ D + W+ + L+G
Sbjct: 144 -GSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQT----LEG 198
Query: 226 HCFAVLCLVAIEKL--IFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEM 283
H V C +L I +GSED T+R+W + + + L+ V C+A+
Sbjct: 199 HAQNVSCASFHPELPIIITGSEDGTVRIWHSST----YRLESTLNYGMERVWCVASLRGS 254
Query: 284 EKVVMGF 290
V +G+
Sbjct: 255 NNVALGY 261
Score = 130 (50.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 49/219 (22%), Positives = 89/219 (40%)
Query: 92 VSCMAFYHAEGLLYTGSFDKTVKA--WRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVF 149
V F + + TG+ D ++ + L++ V F AH + I V+ F+
Sbjct: 31 VRAAKFVARKNWVVTGADDMQIRVFNYNTLER----VHMFEAHSDYIRCIAVHPTQPFIL 86
Query: 150 TCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWE 209
T S D +K+W + + + + V + ++ +N F S S D +I W+
Sbjct: 87 TSSDDMLIKLWDW---DKKWSCSQVFEGHTHYVMQIVINPKDNNQFA-SASLDRTIKVWQ 142
Query: 210 KDKMSGGFNHGGFLQGHCFAVLCLVAI----EKLIFSGSEDTTIRVWRRAEGGCYHECLA 265
S F L+GH V C+ + + SG++D +++W C+
Sbjct: 143 LGSSSPNFT----LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQN----KTCVQ 194
Query: 266 VLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
L+GH V C + E+ ++ G S D T ++W
Sbjct: 195 TLEGHAQNVSCASFHPELPIIITG------SEDGTVRIW 227
Score = 124 (48.7 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 38/130 (29%), Positives = 62/130 (47%)
Query: 78 SFSKSNTQQQHRDCVSCMAFYHA--EGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESN 135
S S + T + H V+C+ +Y + L +G+ D+ VK W +K TCV + H N
Sbjct: 145 SSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNK--TCVQTLEGHAQN 202
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYF 195
V+ + + + T S DG+V+IW +++ L TL + V +A +N
Sbjct: 203 VSCASFHPELPIIITGSEDGTVRIWH----SSTYRLESTLNYGMERVWCVASLRGSNNVA 258
Query: 196 LYSGSSDGSI 205
L G +GSI
Sbjct: 259 L--GYDEGSI 266
Score = 63 (27.2 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGE-VRAILAHDNMLF--TTNKDCKIRIWNF 56
V TG+ +IRV+ + +ER + H + +R I H F T++ D I++W++
Sbjct: 43 VVTGADDMQIRVFNY-NTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDW 99
Score = 39 (18.8 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 32 VRA--ILAHDNMLFTTNKDCKIRIWNF 56
VRA +A N + T D +IR++N+
Sbjct: 31 VRAAKFVARKNWVVTGADDMQIRVFNY 57
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 174 (66.3 bits), Expect = 9.2e-12, Sum P(2) = 9.2e-12
Identities = 69/248 (27%), Positives = 106/248 (42%)
Query: 76 FLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESN 135
F F T H VS +A + + S DKT+K W V + CV +F H
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREW 236
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYRENSHTLTMTLKFQQSSVNALALS 188
V + NQD + +CS+D +V++W + RE+ H + +SS + ++ +
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEA 296
Query: 189 SFFDNY-------FLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KL 239
+ + FL SGS D +I W+ +S G L GH V ++ K
Sbjct: 297 TGSETKKSGKPGPFLLSGSRDKTIKMWD---ISTGMCLMT-LVGHDNWVRGVLFHSGGKF 352
Query: 240 IFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQ 299
I S ++D T+RVW C+ L+ H V SL+ K V + S+DQ
Sbjct: 353 ILSCADDKTLRVWDFKN----KRCMKTLNAHEHFV----TSLDFHKTAP--YVVTGSVDQ 402
Query: 300 TFKVWRVK 307
T KVW +
Sbjct: 403 TVKVWECR 410
Score = 114 (45.2 bits), Expect = 0.00095, P = 0.00095
Identities = 60/236 (25%), Positives = 97/236 (41%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVD-SFVAHESNVNAIVVNQDDG 146
HR V+ + F+ ++ + S D T+K W D + + H +V I +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVW---DYETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
+ +CS+D ++K+W T+ +V+++A+ D+ + S S D +I
Sbjct: 164 LLASCSADMTIKLWDF----QGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIK 217
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK--LIFSGSEDTTIRVWRRAEGGCYHECL 264
WE + G+ F GH V + + LI S S D T+RVW A EC
Sbjct: 218 MWE---VQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT----KECK 269
Query: 265 AVLDGHRGPVRCL-------------AASLEMEKVVM-GFLVYSSSLDQTFKVWRV 306
A L H V C+ A E +K G + S S D+T K+W +
Sbjct: 270 AELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDI 325
Score = 51 (23.0 bits), Expect = 9.2e-12, Sum P(2) = 9.2e-12
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 21 ERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKK 66
E+ + V ++ H +++ + ++D I++W++ D RT K
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK 147
Score = 45 (20.9 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 17/67 (25%), Positives = 30/67 (44%)
Query: 1 MVFTGSSSTRIRVWR-QPDCVERGFIKARHGEVRAI-LAHDNMLFTT-NKDCKIRIWNFT 57
++ + S I+VW + ER +K V+ I H L + + D I++W+F
Sbjct: 122 VMVSASEDATIKVWDYETGDFERT-LKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQ 180
Query: 58 VSDNFRT 64
+ RT
Sbjct: 181 GFECIRT 187
>UNIPROTKB|B4DZI8 [details] [associations]
symbol:COPB2 "Coatomer protein complex, subunit beta 2
(Beta prime), isoform CRA_b" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005794
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
UniGene:Hs.681616 HGNC:HGNC:2232 ChiTaRS:COPB2 EMBL:AC024933
EMBL:AK302943 IPI:IPI00789674 SMR:B4DZI8 STRING:B4DZI8
Ensembl:ENST00000507777 Uniprot:B4DZI8
Length = 877
Score = 190 (71.9 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 61/247 (24%), Positives = 106/247 (42%)
Query: 48 DCKIRIWNFTVSDNFRTKKVTTLPRRS-SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYT 106
D +R F N+ + R ++ + + + + H D + C+A + + + T
Sbjct: 28 DLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILT 87
Query: 107 GSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSS-DGSVKIWRRVYR 165
S D +K W DK+ +C F H V IV+N D F +S D ++K+W+
Sbjct: 88 SSDDMLIKLWD-WDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQL--- 143
Query: 166 ENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQG 225
S + TL+ + VN + S D +L SG+ D + W+ + L+G
Sbjct: 144 -GSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQT----LEG 198
Query: 226 HCFAVLCLVAIEKL--IFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEM 283
H V C +L I +GSED T+R+W + + + L+ V C+A+
Sbjct: 199 HAQNVSCASFHPELPIIITGSEDGTVRIWHSST----YRLESTLNYGMERVWCVASLRGS 254
Query: 284 EKVVMGF 290
V +G+
Sbjct: 255 NNVALGY 261
Score = 130 (50.8 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 49/219 (22%), Positives = 89/219 (40%)
Query: 92 VSCMAFYHAEGLLYTGSFDKTVKA--WRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVF 149
V F + + TG+ D ++ + L++ V F AH + I V+ F+
Sbjct: 31 VRAAKFVARKNWVVTGADDMQIRVFNYNTLER----VHMFEAHSDYIRCIAVHPTQPFIL 86
Query: 150 TCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWE 209
T S D +K+W + + + + V + ++ +N F S S D +I W+
Sbjct: 87 TSSDDMLIKLWDW---DKKWSCSQVFEGHTHYVMQIVINPKDNNQFA-SASLDRTIKVWQ 142
Query: 210 KDKMSGGFNHGGFLQGHCFAVLCLVAI----EKLIFSGSEDTTIRVWRRAEGGCYHECLA 265
S F L+GH V C+ + + SG++D +++W C+
Sbjct: 143 LGSSSPNFT----LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQN----KTCVQ 194
Query: 266 VLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
L+GH V C + E+ ++ G S D T ++W
Sbjct: 195 TLEGHAQNVSCASFHPELPIIITG------SEDGTVRIW 227
Score = 124 (48.7 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 38/130 (29%), Positives = 62/130 (47%)
Query: 78 SFSKSNTQQQHRDCVSCMAFYHA--EGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESN 135
S S + T + H V+C+ +Y + L +G+ D+ VK W +K TCV + H N
Sbjct: 145 SSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNK--TCVQTLEGHAQN 202
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYF 195
V+ + + + T S DG+V+IW +++ L TL + V +A +N
Sbjct: 203 VSCASFHPELPIIITGSEDGTVRIWH----SSTYRLESTLNYGMERVWCVASLRGSNNVA 258
Query: 196 LYSGSSDGSI 205
L G +GSI
Sbjct: 259 L--GYDEGSI 266
Score = 63 (27.2 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGE-VRAILAHDNMLF--TTNKDCKIRIWNF 56
V TG+ +IRV+ + +ER + H + +R I H F T++ D I++W++
Sbjct: 43 VVTGADDMQIRVFNY-NTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDW 99
Score = 39 (18.8 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 32 VRA--ILAHDNMLFTTNKDCKIRIWNF 56
VRA +A N + T D +IR++N+
Sbjct: 31 VRAAKFVARKNWVVTGADDMQIRVFNY 57
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 181 (68.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 57/221 (25%), Positives = 93/221 (42%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H + C+ F ++ +GSFD+TV+ W V +C V AH V A+ N+D
Sbjct: 112 HTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKV--LPAHSDPVTAVDFNRDGSL 169
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ + S DG +IW H + + + V+ + S + F+ G+ D ++
Sbjct: 170 IVSSSYDGLCRIWDS---GTGHCVKTLIDDENPPVSFVRFSP--NGKFILVGTLDNTLRL 224
Query: 208 WEKDKMSGGFNHGGFLQG-HCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAV 266
W + G + +C + V K I SGSED + +W + L
Sbjct: 225 WNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNS----KKLLQK 280
Query: 267 LDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
L+GH V +A E L+ S SLD+T ++W K
Sbjct: 281 LEGHTETVMNVACH-PTEN-----LIASGSLDKTVRIWTQK 315
Score = 136 (52.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 55/227 (24%), Positives = 93/227 (40%)
Query: 70 LPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVL---DKRCTCV 126
+P +SF + S T H VS + F LL + S DKT++ + + D V
Sbjct: 5 IPATASFTPYVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPV 64
Query: 127 DSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALA 186
F HE+ ++ + + D F+ + S D ++K+W + +L TL + A
Sbjct: 65 QEFTGHENGISDVAFSSDARFIVSASDDKTLKLWD----VETGSLIKTLIGHTNY--AFC 118
Query: 187 LSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KLIFSGS 244
++ + + SGS D ++ W D +G L H V + LI S S
Sbjct: 119 VNFNPQSNMIVSGSFDETVRIW--DVTTGKCLK--VLPAHSDPVTAVDFNRDGSLIVSSS 174
Query: 245 EDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFL 291
D R+W G C ++D PV + S + +++G L
Sbjct: 175 YDGLCRIWDSGTGHCVK---TLIDDENPPVSFVRFSPNGKFILVGTL 218
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 173 (66.0 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 68/248 (27%), Positives = 107/248 (43%)
Query: 76 FLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESN 135
F F T H VS +A + + + DKT+K W V + CV +F H
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEV--QTGYCVKTFTGHREW 236
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYRENSHTLTMTLKFQQSSVNALALS 188
V + NQD + +CS+D +V++W + RE+ H + +SS ++++ +
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEA 296
Query: 189 SFFDNY-------FLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KL 239
+ + FL SGS D +I W+ +S G L GH V ++ K
Sbjct: 297 TGSETKKSGKPGPFLLSGSRDKTIKMWD---VSTGMCLMT-LVGHDNWVRGVLFHSGGKF 352
Query: 240 IFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQ 299
I S ++D T+RVW C+ L+ H V SL+ K V + S+DQ
Sbjct: 353 ILSCADDKTLRVWDYKN----KRCMKTLNAHEHFV----TSLDFHKTAP--YVVTGSVDQ 402
Query: 300 TFKVWRVK 307
T KVW +
Sbjct: 403 TVKVWECR 410
Score = 51 (23.0 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 21 ERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKK 66
E+ + V ++ H +++ + ++D I++W++ D RT K
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK 147
Score = 46 (21.3 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 17/67 (25%), Positives = 30/67 (44%)
Query: 1 MVFTGSSSTRIRVWR-QPDCVERGFIKARHGEVRAI-LAHDNMLFTT-NKDCKIRIWNFT 57
++ + S I+VW + ER +K V+ I H L + + D I++W+F
Sbjct: 122 VMVSASEDATIKVWDYETGDFERT-LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 58 VSDNFRT 64
+ RT
Sbjct: 181 GFECIRT 187
>UNIPROTKB|E1C016 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AADN02024196
IPI:IPI00598430 RefSeq:XP_422637.2 ProteinModelPortal:E1C016
Ensembl:ENSGALT00000008592 GeneID:424823 KEGG:gga:424823
NextBio:20827098 Uniprot:E1C016
Length = 913
Score = 192 (72.6 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 61/247 (24%), Positives = 107/247 (43%)
Query: 48 DCKIRIWNFTVSDNFRTKKVTTLPRRS-SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYT 106
D +R F N+ + R ++ + + + + H D + C+A + + + T
Sbjct: 57 DLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILT 116
Query: 107 GSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSS-DGSVKIWRRVYR 165
S D +K W DK+ +C F H V IV+N D F +S D ++K+W+
Sbjct: 117 SSDDMLIKLWD-WDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQL--- 172
Query: 166 ENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQG 225
S + TL+ + VN + S D +L SG+ D + W+ + L+G
Sbjct: 173 -GSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQT----LEG 227
Query: 226 HCFAVLCLVAIEKL--IFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEM 283
H V C+ +L I +GSED T+R+W + + + L+ V C+A+
Sbjct: 228 HAQNVSCVSFHPELPIIITGSEDGTVRIWHSST----YRLESTLNYGMERVWCVASLRGS 283
Query: 284 EKVVMGF 290
V +G+
Sbjct: 284 NNVALGY 290
Score = 132 (51.5 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 49/219 (22%), Positives = 90/219 (41%)
Query: 92 VSCMAFYHAEGLLYTGSFDKTVKA--WRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVF 149
V F + + TG+ D ++ + L++ V F AH + I V+ F+
Sbjct: 60 VRAAKFVARKNWVVTGADDMQIRVFNYNTLER----VHMFEAHSDYIRCIAVHPTQPFIL 115
Query: 150 TCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWE 209
T S D +K+W + + + + V + ++ +N F S S D +I W+
Sbjct: 116 TSSDDMLIKLWDW---DKKWSCSQVFEGHTHYVMQIVINPKDNNQFA-SASLDRTIKVWQ 171
Query: 210 KDKMSGGFNHGGFLQGHCFAVLCLVAI----EKLIFSGSEDTTIRVWRRAEGGCYHECLA 265
S F L+GH V C+ + + SG++D +++W C+
Sbjct: 172 LGSSSPNFT----LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQN----KTCVQ 223
Query: 266 VLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
L+GH V C++ E+ ++ G S D T ++W
Sbjct: 224 TLEGHAQNVSCVSFHPELPIIITG------SEDGTVRIW 256
Score = 128 (50.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 38/130 (29%), Positives = 63/130 (48%)
Query: 78 SFSKSNTQQQHRDCVSCMAFYHA--EGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESN 135
S S + T + H V+C+ +Y + L +G+ D+ VK W +K TCV + H N
Sbjct: 174 SSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNK--TCVQTLEGHAQN 231
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYF 195
V+ + + + + T S DG+V+IW +++ L TL + V +A +N
Sbjct: 232 VSCVSFHPELPIIITGSEDGTVRIWH----SSTYRLESTLNYGMERVWCVASLRGSNNVA 287
Query: 196 LYSGSSDGSI 205
L G +GSI
Sbjct: 288 L--GYDEGSI 295
Score = 63 (27.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGE-VRAILAHDNMLF--TTNKDCKIRIWNF 56
V TG+ +IRV+ + +ER + H + +R I H F T++ D I++W++
Sbjct: 72 VVTGADDMQIRVFNY-NTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDW 128
Score = 40 (19.1 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 11/53 (20%), Positives = 25/53 (47%)
Query: 25 IKARHGEVRAILAH--DNMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSS 75
+ AR V+++ H + + + + + +WN +T +V LP R++
Sbjct: 11 LTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAA 63
Score = 39 (18.8 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 32 VRA--ILAHDNMLFTTNKDCKIRIWNF 56
VRA +A N + T D +IR++N+
Sbjct: 60 VRAAKFVARKNWVVTGADDMQIRVFNY 86
>DICTYBASE|DDB_G0283005 [details] [associations]
symbol:agtA "UDP-Gal:fucoside
alpha3-galactosyltransferase" species:44689 "Dictyostelium
discoideum" [GO:0035250 "UDP-galactosyltransferase activity"
evidence=IDA] [GO:0006486 "protein glycosylation" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA;TAS] [GO:0004381
"fucosylgalactoside 3-alpha-galactosyltransferase activity"
evidence=IEA] [GO:0016757 "transferase activity, transferring
glycosyl groups" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00378 dictyBase:DDB_G0283005
GO:GO:0005737 GenomeReviews:CM000153_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006486 EMBL:AAFI02000049
GO:GO:0035250 EMBL:DQ340632 RefSeq:XP_639311.1
ProteinModelPortal:Q54RP0 CAZy:GT77 EnsemblProtists:DDB0231341
GeneID:8623882 KEGG:ddi:DDB_G0283005 OMA:SSINCIH GO:GO:0004381
InterPro:IPR005069 Pfam:PF03407 Uniprot:Q54RP0
Length = 648
Score = 185 (70.2 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 64/227 (28%), Positives = 106/227 (46%)
Query: 39 DNMLFTTNKDCKIRIWNF-----TVSDN--FRTKKVTTLPRRSSFLS-FSKSNTQQQHRD 90
D LFTT+ D I+IW F +DN F+ K + +R S F S+ + D
Sbjct: 333 DGKLFTTSIDKSIKIWKFENTSGNDTDNGIFKVLKSKYIHKRGGIWSTFIFSSNNNNNND 392
Query: 91 CVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFT 150
Y E LL T S DKT++ W D + +F+ H +N ++V + + FT
Sbjct: 393 -------YGFENLL-TSSHDKTIQYW---DNNLQVIQTFIGHTGIINQLIVIPNSSYFFT 441
Query: 151 CSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEK 210
CS D ++ R + N+ V+++A++ + LYS S+DG+I FW+
Sbjct: 442 CSDDNTI----RQFDLNNINFKRVFIGHNGWVSSIAINKNLNT--LYSCSNDGTIRFWDI 495
Query: 211 DK-----MSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVW 252
+ + G N GG+++ ++ + +LI SG D TI++W
Sbjct: 496 NSGRCLNIIKG-NQGGWIR----KIIYNDNLNQLI-SGGNDGTIKIW 536
>MGI|MGI:1354962 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10090 "Mus musculus" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0005080 "protein kinase C binding" evidence=ISO]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISA;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 MGI:MGI:1354962
GO:GO:0005794 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:AK088064 EMBL:AK153352 EMBL:AF043120 EMBL:BC006675
IPI:IPI00115097 RefSeq:NP_056642.1 UniGene:Mm.400464
ProteinModelPortal:O55029 SMR:O55029 IntAct:O55029 STRING:O55029
PhosphoSite:O55029 PaxDb:O55029 PRIDE:O55029
Ensembl:ENSMUST00000035033 GeneID:50797 KEGG:mmu:50797
UCSC:uc009rdm.1 InParanoid:O55029 NextBio:307805 Bgee:O55029
Genevestigator:O55029 GermOnline:ENSMUSG00000032458 Uniprot:O55029
Length = 905
Score = 190 (71.9 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 61/247 (24%), Positives = 106/247 (42%)
Query: 48 DCKIRIWNFTVSDNFRTKKVTTLPRRS-SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYT 106
D +R F N+ + R ++ + + + + H D + C+A + + + T
Sbjct: 57 DLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILT 116
Query: 107 GSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSS-DGSVKIWRRVYR 165
S D +K W DK+ +C F H V IV+N D F +S D ++K+W+
Sbjct: 117 SSDDMLIKLWD-WDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQL--- 172
Query: 166 ENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQG 225
S + TL+ + VN + S D +L SG+ D + W+ + L+G
Sbjct: 173 -GSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQT----LEG 227
Query: 226 HCFAVLCLVAIEKL--IFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEM 283
H V C +L I +GSED T+R+W + + + L+ V C+A+
Sbjct: 228 HAQNVSCASFHPELPIIITGSEDGTVRIWHSST----YRLESTLNYGMERVWCVASLRGS 283
Query: 284 EKVVMGF 290
V +G+
Sbjct: 284 NNVALGY 290
Score = 130 (50.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 49/219 (22%), Positives = 89/219 (40%)
Query: 92 VSCMAFYHAEGLLYTGSFDKTVKA--WRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVF 149
V F + + TG+ D ++ + L++ V F AH + I V+ F+
Sbjct: 60 VRAAKFVARKNWVVTGADDMQIRVFNYNTLER----VHMFEAHSDYIRCIAVHPTQPFIL 115
Query: 150 TCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWE 209
T S D +K+W + + + + V + ++ +N F S S D +I W+
Sbjct: 116 TSSDDMLIKLWDW---DKKWSCSQVFEGHTHYVMQIVINPKDNNQFA-SASLDRTIKVWQ 171
Query: 210 KDKMSGGFNHGGFLQGHCFAVLCLVAI----EKLIFSGSEDTTIRVWRRAEGGCYHECLA 265
S F L+GH V C+ + + SG++D +++W C+
Sbjct: 172 LGSSSPNFT----LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQN----KTCVQ 223
Query: 266 VLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
L+GH V C + E+ ++ G S D T ++W
Sbjct: 224 TLEGHAQNVSCASFHPELPIIITG------SEDGTVRIW 256
Score = 124 (48.7 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 38/130 (29%), Positives = 62/130 (47%)
Query: 78 SFSKSNTQQQHRDCVSCMAFYHA--EGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESN 135
S S + T + H V+C+ +Y + L +G+ D+ VK W +K TCV + H N
Sbjct: 174 SSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNK--TCVQTLEGHAQN 231
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYF 195
V+ + + + T S DG+V+IW +++ L TL + V +A +N
Sbjct: 232 VSCASFHPELPIIITGSEDGTVRIWH----SSTYRLESTLNYGMERVWCVASLRGSNNVA 287
Query: 196 LYSGSSDGSI 205
L G +GSI
Sbjct: 288 L--GYDEGSI 295
Score = 63 (27.2 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGE-VRAILAHDNMLF--TTNKDCKIRIWNF 56
V TG+ +IRV+ + +ER + H + +R I H F T++ D I++W++
Sbjct: 72 VVTGADDMQIRVFNY-NTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDW 128
Score = 40 (19.1 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 11/53 (20%), Positives = 25/53 (47%)
Query: 25 IKARHGEVRAILAH--DNMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSS 75
+ AR V+++ H + + + + + +WN +T +V LP R++
Sbjct: 11 LTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAA 63
Score = 39 (18.8 bits), Expect = 0.00082, Sum P(2) = 0.00081
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 32 VRA--ILAHDNMLFTTNKDCKIRIWNF 56
VRA +A N + T D +IR++N+
Sbjct: 60 VRAAKFVARKNWVVTGADDMQIRVFNY 86
>UNIPROTKB|P35605 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISS;TAS]
[GO:0005794 "Golgi apparatus" evidence=ISS] [GO:0000139 "Golgi
membrane" evidence=ISS] [GO:0030126 "COPI vesicle coat"
evidence=ISS;IDA] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0005080 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GO:GO:0006890 EMBL:X72756 EMBL:BC134537
IPI:IPI00706476 PIR:S35312 RefSeq:NP_776706.2 UniGene:Bt.4801
ProteinModelPortal:P35605 IntAct:P35605 STRING:P35605 PRIDE:P35605
GeneID:281706 KEGG:bta:281706 CTD:9276 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InParanoid:P35605 OrthoDB:EOG43R3KZ
NextBio:20805628 InterPro:IPR016453 PIRSF:PIRSF005567
Uniprot:P35605
Length = 906
Score = 190 (71.9 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 61/247 (24%), Positives = 106/247 (42%)
Query: 48 DCKIRIWNFTVSDNFRTKKVTTLPRRS-SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYT 106
D +R F N+ + R ++ + + + + H D + C+A + + + T
Sbjct: 57 DLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILT 116
Query: 107 GSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSS-DGSVKIWRRVYR 165
S D +K W DK+ +C F H V IV+N D F +S D ++K+W+
Sbjct: 117 SSDDMLIKLWD-WDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQL--- 172
Query: 166 ENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQG 225
S + TL+ + VN + S D +L SG+ D + W+ + L+G
Sbjct: 173 -GSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQT----LEG 227
Query: 226 HCFAVLCLVAIEKL--IFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEM 283
H V C +L I +GSED T+R+W + + + L+ V C+A+
Sbjct: 228 HAQNVSCASFHPELPIIITGSEDGTVRIWHSST----YRLESTLNYGMERVWCVASLRGS 283
Query: 284 EKVVMGF 290
V +G+
Sbjct: 284 NNVALGY 290
Score = 130 (50.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 49/219 (22%), Positives = 89/219 (40%)
Query: 92 VSCMAFYHAEGLLYTGSFDKTVKA--WRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVF 149
V F + + TG+ D ++ + L++ V F AH + I V+ F+
Sbjct: 60 VRAAKFVARKNWVVTGADDMQIRVFNYNTLER----VHMFEAHSDYIRCIAVHPTQPFIL 115
Query: 150 TCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWE 209
T S D +K+W + + + + V + ++ +N F S S D +I W+
Sbjct: 116 TSSDDMLIKLWDW---DKKWSCSQVFEGHTHYVMQIVINPKDNNQFA-SASLDRTIKVWQ 171
Query: 210 KDKMSGGFNHGGFLQGHCFAVLCLVAI----EKLIFSGSEDTTIRVWRRAEGGCYHECLA 265
S F L+GH V C+ + + SG++D +++W C+
Sbjct: 172 LGSSSPNFT----LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQN----KTCVQ 223
Query: 266 VLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
L+GH V C + E+ ++ G S D T ++W
Sbjct: 224 TLEGHAQNVSCASFHPELPIIITG------SEDGTVRIW 256
Score = 124 (48.7 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 38/130 (29%), Positives = 62/130 (47%)
Query: 78 SFSKSNTQQQHRDCVSCMAFYHA--EGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESN 135
S S + T + H V+C+ +Y + L +G+ D+ VK W +K TCV + H N
Sbjct: 174 SSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNK--TCVQTLEGHAQN 231
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYF 195
V+ + + + T S DG+V+IW +++ L TL + V +A +N
Sbjct: 232 VSCASFHPELPIIITGSEDGTVRIWH----SSTYRLESTLNYGMERVWCVASLRGSNNVA 287
Query: 196 LYSGSSDGSI 205
L G +GSI
Sbjct: 288 L--GYDEGSI 295
Score = 63 (27.2 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGE-VRAILAHDNMLF--TTNKDCKIRIWNF 56
V TG+ +IRV+ + +ER + H + +R I H F T++ D I++W++
Sbjct: 72 VVTGADDMQIRVFNY-NTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDW 128
Score = 40 (19.1 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 11/53 (20%), Positives = 25/53 (47%)
Query: 25 IKARHGEVRAILAH--DNMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSS 75
+ AR V+++ H + + + + + +WN +T +V LP R++
Sbjct: 11 LTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAA 63
Score = 39 (18.8 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 32 VRA--ILAHDNMLFTTNKDCKIRIWNF 56
VRA +A N + T D +IR++N+
Sbjct: 60 VRAAKFVARKNWVVTGADDMQIRVFNY 86
>UNIPROTKB|E2R667 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AAEX03013631
ProteinModelPortal:E2R667 Ensembl:ENSCAFT00000012160 Uniprot:E2R667
Length = 906
Score = 190 (71.9 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 61/247 (24%), Positives = 106/247 (42%)
Query: 48 DCKIRIWNFTVSDNFRTKKVTTLPRRS-SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYT 106
D +R F N+ + R ++ + + + + H D + C+A + + + T
Sbjct: 57 DLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILT 116
Query: 107 GSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSS-DGSVKIWRRVYR 165
S D +K W DK+ +C F H V IV+N D F +S D ++K+W+
Sbjct: 117 SSDDMLIKLWD-WDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQL--- 172
Query: 166 ENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQG 225
S + TL+ + VN + S D +L SG+ D + W+ + L+G
Sbjct: 173 -GSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQT----LEG 227
Query: 226 HCFAVLCLVAIEKL--IFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEM 283
H V C +L I +GSED T+R+W + + + L+ V C+A+
Sbjct: 228 HAQNVSCASFHPELPIIITGSEDGTVRIWHSST----YRLESTLNYGMERVWCVASLRGS 283
Query: 284 EKVVMGF 290
V +G+
Sbjct: 284 NNVALGY 290
Score = 130 (50.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 49/219 (22%), Positives = 89/219 (40%)
Query: 92 VSCMAFYHAEGLLYTGSFDKTVKA--WRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVF 149
V F + + TG+ D ++ + L++ V F AH + I V+ F+
Sbjct: 60 VRAAKFVARKNWVVTGADDMQIRVFNYNTLER----VHMFEAHSDYIRCIAVHPTQPFIL 115
Query: 150 TCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWE 209
T S D +K+W + + + + V + ++ +N F S S D +I W+
Sbjct: 116 TSSDDMLIKLWDW---DKKWSCSQVFEGHTHYVMQIVINPKDNNQFA-SASLDRTIKVWQ 171
Query: 210 KDKMSGGFNHGGFLQGHCFAVLCLVAI----EKLIFSGSEDTTIRVWRRAEGGCYHECLA 265
S F L+GH V C+ + + SG++D +++W C+
Sbjct: 172 LGSSSPNFT----LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQN----KTCVQ 223
Query: 266 VLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
L+GH V C + E+ ++ G S D T ++W
Sbjct: 224 TLEGHAQNVSCASFHPELPIIITG------SEDGTVRIW 256
Score = 124 (48.7 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 38/130 (29%), Positives = 62/130 (47%)
Query: 78 SFSKSNTQQQHRDCVSCMAFYHA--EGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESN 135
S S + T + H V+C+ +Y + L +G+ D+ VK W +K TCV + H N
Sbjct: 174 SSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNK--TCVQTLEGHAQN 231
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYF 195
V+ + + + T S DG+V+IW +++ L TL + V +A +N
Sbjct: 232 VSCASFHPELPIIITGSEDGTVRIWH----SSTYRLESTLNYGMERVWCVASLRGSNNVA 287
Query: 196 LYSGSSDGSI 205
L G +GSI
Sbjct: 288 L--GYDEGSI 295
Score = 63 (27.2 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGE-VRAILAHDNMLF--TTNKDCKIRIWNF 56
V TG+ +IRV+ + +ER + H + +R I H F T++ D I++W++
Sbjct: 72 VVTGADDMQIRVFNY-NTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDW 128
Score = 40 (19.1 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 11/53 (20%), Positives = 25/53 (47%)
Query: 25 IKARHGEVRAILAH--DNMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSS 75
+ AR V+++ H + + + + + +WN +T +V LP R++
Sbjct: 11 LTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAA 63
Score = 39 (18.8 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 32 VRA--ILAHDNMLFTTNKDCKIRIWNF 56
VRA +A N + T D +IR++N+
Sbjct: 60 VRAAKFVARKNWVVTGADDMQIRVFNY 86
>UNIPROTKB|P35606 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=TAS] [GO:0030126 "COPI vesicle coat" evidence=IDA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891
GO:GO:0030126 GO:GO:0048205 GO:GO:0006890 CTD:9276
HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG EMBL:X70476
EMBL:BC000326 IPI:IPI00220219 PIR:S35342 RefSeq:NP_004757.1
UniGene:Hs.681616 ProteinModelPortal:P35606 SMR:P35606
DIP:DIP-27603N IntAct:P35606 MINT:MINT-5000992 STRING:P35606
PhosphoSite:P35606 DMDM:544076 PaxDb:P35606 PeptideAtlas:P35606
PRIDE:P35606 DNASU:9276 Ensembl:ENST00000333188 GeneID:9276
KEGG:hsa:9276 UCSC:uc003etf.4 GeneCards:GC03M139076 HGNC:HGNC:2232
HPA:HPA036867 MIM:606990 neXtProt:NX_P35606 PharmGKB:PA26748
InParanoid:P35606 PhylomeDB:P35606 ChiTaRS:COPB2 GenomeRNAi:9276
NextBio:34765 ArrayExpress:P35606 Bgee:P35606 CleanEx:HS_COPB2
Genevestigator:P35606 GermOnline:ENSG00000184432 Uniprot:P35606
Length = 906
Score = 190 (71.9 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 61/247 (24%), Positives = 106/247 (42%)
Query: 48 DCKIRIWNFTVSDNFRTKKVTTLPRRS-SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYT 106
D +R F N+ + R ++ + + + + H D + C+A + + + T
Sbjct: 57 DLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILT 116
Query: 107 GSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSS-DGSVKIWRRVYR 165
S D +K W DK+ +C F H V IV+N D F +S D ++K+W+
Sbjct: 117 SSDDMLIKLWD-WDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQL--- 172
Query: 166 ENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQG 225
S + TL+ + VN + S D +L SG+ D + W+ + L+G
Sbjct: 173 -GSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQT----LEG 227
Query: 226 HCFAVLCLVAIEKL--IFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEM 283
H V C +L I +GSED T+R+W + + + L+ V C+A+
Sbjct: 228 HAQNVSCASFHPELPIIITGSEDGTVRIWHSST----YRLESTLNYGMERVWCVASLRGS 283
Query: 284 EKVVMGF 290
V +G+
Sbjct: 284 NNVALGY 290
Score = 130 (50.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 49/219 (22%), Positives = 89/219 (40%)
Query: 92 VSCMAFYHAEGLLYTGSFDKTVKA--WRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVF 149
V F + + TG+ D ++ + L++ V F AH + I V+ F+
Sbjct: 60 VRAAKFVARKNWVVTGADDMQIRVFNYNTLER----VHMFEAHSDYIRCIAVHPTQPFIL 115
Query: 150 TCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWE 209
T S D +K+W + + + + V + ++ +N F S S D +I W+
Sbjct: 116 TSSDDMLIKLWDW---DKKWSCSQVFEGHTHYVMQIVINPKDNNQFA-SASLDRTIKVWQ 171
Query: 210 KDKMSGGFNHGGFLQGHCFAVLCLVAI----EKLIFSGSEDTTIRVWRRAEGGCYHECLA 265
S F L+GH V C+ + + SG++D +++W C+
Sbjct: 172 LGSSSPNFT----LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQN----KTCVQ 223
Query: 266 VLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
L+GH V C + E+ ++ G S D T ++W
Sbjct: 224 TLEGHAQNVSCASFHPELPIIITG------SEDGTVRIW 256
Score = 124 (48.7 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 38/130 (29%), Positives = 62/130 (47%)
Query: 78 SFSKSNTQQQHRDCVSCMAFYHA--EGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESN 135
S S + T + H V+C+ +Y + L +G+ D+ VK W +K TCV + H N
Sbjct: 174 SSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNK--TCVQTLEGHAQN 231
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYF 195
V+ + + + T S DG+V+IW +++ L TL + V +A +N
Sbjct: 232 VSCASFHPELPIIITGSEDGTVRIWH----SSTYRLESTLNYGMERVWCVASLRGSNNVA 287
Query: 196 LYSGSSDGSI 205
L G +GSI
Sbjct: 288 L--GYDEGSI 295
Score = 63 (27.2 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGE-VRAILAHDNMLF--TTNKDCKIRIWNF 56
V TG+ +IRV+ + +ER + H + +R I H F T++ D I++W++
Sbjct: 72 VVTGADDMQIRVFNY-NTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDW 128
Score = 40 (19.1 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 11/53 (20%), Positives = 25/53 (47%)
Query: 25 IKARHGEVRAILAH--DNMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSS 75
+ AR V+++ H + + + + + +WN +T +V LP R++
Sbjct: 11 LTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAA 63
Score = 39 (18.8 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 32 VRA--ILAHDNMLFTTNKDCKIRIWNF 56
VRA +A N + T D +IR++N+
Sbjct: 60 VRAAKFVARKNWVVTGADDMQIRVFNY 86
>UNIPROTKB|F1SL54 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 CTD:9276 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:CU582855 RefSeq:XP_001926139.3 UniGene:Ssc.51974
Ensembl:ENSSSCT00000012767 GeneID:100156939 KEGG:ssc:100156939
Uniprot:F1SL54
Length = 906
Score = 190 (71.9 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 61/247 (24%), Positives = 106/247 (42%)
Query: 48 DCKIRIWNFTVSDNFRTKKVTTLPRRS-SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYT 106
D +R F N+ + R ++ + + + + H D + C+A + + + T
Sbjct: 57 DLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILT 116
Query: 107 GSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSS-DGSVKIWRRVYR 165
S D +K W DK+ +C F H V IV+N D F +S D ++K+W+
Sbjct: 117 SSDDMLIKLWD-WDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQL--- 172
Query: 166 ENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQG 225
S + TL+ + VN + S D +L SG+ D + W+ + L+G
Sbjct: 173 -GSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQT----LEG 227
Query: 226 HCFAVLCLVAIEKL--IFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEM 283
H V C +L I +GSED T+R+W + + + L+ V C+A+
Sbjct: 228 HAQNVSCASFHPELPIIITGSEDGTVRIWHSST----YRLESTLNYGMERVWCVASLRGS 283
Query: 284 EKVVMGF 290
V +G+
Sbjct: 284 NNVALGY 290
Score = 130 (50.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 49/219 (22%), Positives = 89/219 (40%)
Query: 92 VSCMAFYHAEGLLYTGSFDKTVKA--WRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVF 149
V F + + TG+ D ++ + L++ V F AH + I V+ F+
Sbjct: 60 VRAAKFVARKNWVVTGADDMQIRVFNYNTLER----VHMFEAHSDYIRCIAVHPTQPFIL 115
Query: 150 TCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWE 209
T S D +K+W + + + + V + ++ +N F S S D +I W+
Sbjct: 116 TSSDDMLIKLWDW---DKKWSCSQVFEGHTHYVMQIVINPKDNNQFA-SASLDRTIKVWQ 171
Query: 210 KDKMSGGFNHGGFLQGHCFAVLCLVAI----EKLIFSGSEDTTIRVWRRAEGGCYHECLA 265
S F L+GH V C+ + + SG++D +++W C+
Sbjct: 172 LGSSSPNFT----LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQN----KTCVQ 223
Query: 266 VLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
L+GH V C + E+ ++ G S D T ++W
Sbjct: 224 TLEGHAQNVSCASFHPELPIIITG------SEDGTVRIW 256
Score = 124 (48.7 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 38/130 (29%), Positives = 62/130 (47%)
Query: 78 SFSKSNTQQQHRDCVSCMAFYHA--EGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESN 135
S S + T + H V+C+ +Y + L +G+ D+ VK W +K TCV + H N
Sbjct: 174 SSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNK--TCVQTLEGHAQN 231
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYF 195
V+ + + + T S DG+V+IW +++ L TL + V +A +N
Sbjct: 232 VSCASFHPELPIIITGSEDGTVRIWH----SSTYRLESTLNYGMERVWCVASLRGSNNVA 287
Query: 196 LYSGSSDGSI 205
L G +GSI
Sbjct: 288 L--GYDEGSI 295
Score = 63 (27.2 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGE-VRAILAHDNMLF--TTNKDCKIRIWNF 56
V TG+ +IRV+ + +ER + H + +R I H F T++ D I++W++
Sbjct: 72 VVTGADDMQIRVFNY-NTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDW 128
Score = 40 (19.1 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 11/53 (20%), Positives = 25/53 (47%)
Query: 25 IKARHGEVRAILAH--DNMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSS 75
+ AR V+++ H + + + + + +WN +T +V LP R++
Sbjct: 11 LTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAA 63
Score = 39 (18.8 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 32 VRA--ILAHDNMLFTTNKDCKIRIWNF 56
VRA +A N + T D +IR++N+
Sbjct: 60 VRAAKFVARKNWVVTGADDMQIRVFNY 86
>RGD|628746 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10116 "Rattus norvegicus" [GO:0000139 "Golgi
membrane" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO;IDA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=ISO] [GO:0015629 "actin cytoskeleton" evidence=ISO]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISO] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 RGD:628746
GO:GO:0006886 GO:GO:0000139 GO:GO:0030117 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 CTD:9276 HOVERGEN:HBG051076
InterPro:IPR016453 PIRSF:PIRSF005567 GO:GO:0030663 EMBL:AF002705
IPI:IPI00231953 RefSeq:NP_068533.1 UniGene:Rn.37178
ProteinModelPortal:O35142 IntAct:O35142 PRIDE:O35142 GeneID:60384
KEGG:rno:60384 NextBio:612083 Genevestigator:O35142 Uniprot:O35142
Length = 905
Score = 186 (70.5 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 60/247 (24%), Positives = 105/247 (42%)
Query: 48 DCKIRIWNFTVSDNFRTKKVTTLPRRS-SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYT 106
D +R F N+ + R ++ + + + + H D + C+A + + + T
Sbjct: 57 DLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILT 116
Query: 107 GSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSS-DGSVKIWRRVYR 165
S D +K W DK+ +C F H V IV+N D F +S D ++K+W+
Sbjct: 117 SSDDMLIKLWD-WDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQL--- 172
Query: 166 ENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQG 225
S + TL+ + VN + S D +L SG+ D + W+ + +G
Sbjct: 173 -GSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTP----EG 227
Query: 226 HCFAVLCLVAIEKL--IFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEM 283
H V C +L I +GSED T+R+W + + + L+ V C+A+
Sbjct: 228 HAQNVSCATFHPELPIIITGSEDGTVRIWHSST----YRLESTLNYGMERVWCVASLRGS 283
Query: 284 EKVVMGF 290
V +G+
Sbjct: 284 NNVALGY 290
Score = 122 (48.0 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 38/130 (29%), Positives = 62/130 (47%)
Query: 78 SFSKSNTQQQHRDCVSCMAFYHA--EGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESN 135
S S + T + H V+C+ +Y + L +G+ D+ VK W +K TCV + H N
Sbjct: 174 SSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNK--TCVQTPEGHAQN 231
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYF 195
V+ + + + T S DG+V+IW +++ L TL + V +A +N
Sbjct: 232 VSCATFHPELPIIITGSEDGTVRIWH----SSTYRLESTLNYGMERVWCVASLRGSNNVA 287
Query: 196 LYSGSSDGSI 205
L G +GSI
Sbjct: 288 L--GYDEGSI 295
Score = 122 (48.0 bits), Expect = 0.00037, P = 0.00037
Identities = 48/219 (21%), Positives = 87/219 (39%)
Query: 92 VSCMAFYHAEGLLYTGSFDKTVKA--WRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVF 149
V F + + TG+ D ++ + L++ V F AH + I V+ F+
Sbjct: 60 VRAAKFVARKNWVVTGADDMQIRVFNYNTLER----VHMFEAHSDYIRCIAVHPTQPFIL 115
Query: 150 TCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWE 209
T S D +K+W + + + + V + ++ +N F S S D +I W+
Sbjct: 116 TSSDDMLIKLWDW---DKKWSCSQVFEGHTHYVMQIVINPKDNNQFA-SASLDRTIKVWQ 171
Query: 210 KDKMSGGFNHGGFLQGHCFAVLCLVAI----EKLIFSGSEDTTIRVWRRAEGGCYHECLA 265
S F L+GH V C+ + + SG++D +++W C+
Sbjct: 172 LGSSSPNFT----LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQN----KTCVQ 223
Query: 266 VLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
+GH V C E+ ++ G S D T ++W
Sbjct: 224 TPEGHAQNVSCATFHPELPIIITG------SEDGTVRIW 256
Score = 63 (27.2 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGE-VRAILAHDNMLF--TTNKDCKIRIWNF 56
V TG+ +IRV+ + +ER + H + +R I H F T++ D I++W++
Sbjct: 72 VVTGADDMQIRVFNY-NTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDW 128
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 160 (61.4 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 50/190 (26%), Positives = 86/190 (45%)
Query: 88 HRDCVSCMAFYHAEG-LLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDG 146
H VS + A G LL TG D V W + + C+ S H S V ++ +N +
Sbjct: 23 HASNVSSLVLGKASGRLLATGGDDCRVNLWSI--NKPNCIMSLTGHTSPVESVRLNTPEE 80
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
+ S GS+++W + + TL ++++ +L + + F+ SGS D +I
Sbjct: 81 LIVAGSQSGSIRVWDL----EAAKILRTLMGHKANICSLDFHPYGE--FVASGSQDTNIK 134
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KLIFSGSEDTTIRVWRRAEGGCYHECL 264
W+ + F + +GH AV CL K + S ++D T+++W G + +
Sbjct: 135 LWDIRRKGCVFRY----RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAG----KMM 186
Query: 265 AVLDGHRGPV 274
+ GH GPV
Sbjct: 187 SEFPGHTGPV 196
Score = 127 (49.8 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 46/159 (28%), Positives = 70/159 (44%)
Query: 126 VDSFVAHESNVNAIVVNQDDG-FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNA 184
V+ VAH SNV+++V+ + G + T D V +W N M+L S V +
Sbjct: 17 VEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSI----NKPNCIMSLTGHTSPVES 72
Query: 185 LALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE---KLIF 241
+ L++ + +GS GSI W+ + L GH A +C + + +
Sbjct: 73 VRLNT--PEELIVAGSQSGSIRVWDLEAAKILRT----LMGHK-ANICSLDFHPYGEFVA 125
Query: 242 SGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAAS 280
SGS+DT I++W GC GH VRCL S
Sbjct: 126 SGSQDTNIKLWDIRRKGCVFR----YRGHSQAVRCLRFS 160
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 160 (61.4 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 50/190 (26%), Positives = 86/190 (45%)
Query: 88 HRDCVSCMAFYHAEG-LLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDG 146
H VS + A G LL TG D V W + + C+ S H S V ++ +N +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSI--NKPNCIMSLTGHTSPVESVRLNTPEE 76
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
+ S GS+++W + + TL ++++ +L + + F+ SGS D +I
Sbjct: 77 LIVAGSQSGSIRVWDL----EAAKILRTLMGHKANICSLDFHPYGE--FVASGSQDTNIK 130
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KLIFSGSEDTTIRVWRRAEGGCYHECL 264
W+ + F + +GH AV CL K + S ++D T+++W G + +
Sbjct: 131 LWDIRRKGCVFRY----RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAG----KMM 182
Query: 265 AVLDGHRGPV 274
+ GH GPV
Sbjct: 183 SEFPGHTGPV 192
Score = 125 (49.1 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 47/167 (28%), Positives = 72/167 (43%)
Query: 118 VLDKRCTCVDSFVAHESNVNAIVVNQDDG-FVFTCSSDGSVKIWRRVYRENSHTLTMTLK 176
V+ K + VAH SNV+++V+ + G + T D V +W N M+L
Sbjct: 5 VVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSI----NKPNCIMSLT 60
Query: 177 FQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAI 236
S V ++ L++ + +GS GSI W+ + L GH A +C +
Sbjct: 61 GHTSPVESVRLNT--PEELIVAGSQSGSIRVWDLEAAKILRT----LMGHK-ANICSLDF 113
Query: 237 E---KLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAAS 280
+ + SGS+DT I++W GC GH VRCL S
Sbjct: 114 HPYGEFVASGSQDTNIKLWDIRRKGCVFR----YRGHSQAVRCLRFS 156
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 180 (68.4 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 57/192 (29%), Positives = 91/192 (47%)
Query: 83 NTQQQHRDCVSCMAFYHAEG-LLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVV 141
NT + HR+ V +AF + G + TGSFDKT K W V +C +F H + + +
Sbjct: 128 NTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKC--YHTFRGHTAEIVCLSF 185
Query: 142 NQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSS 201
N V T S D + K+W +N + TL+ + + +L+ ++ D + +GS
Sbjct: 186 NPQSTLVATGSMDTTAKLWDI---QNGEEV-YTLRGHSAEIISLSFNTSGDR--IITGSF 239
Query: 202 DGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE---KLIFSGSEDTTIRVWRRAEGG 258
D ++ W+ D +G L GHC A + + LI +GS D T ++W G
Sbjct: 240 DHTVVVWDAD--TG--RKVNILIGHC-AEISSASFNWDCSLILTGSMDKTCKLWDATNG- 293
Query: 259 CYHECLAVLDGH 270
+C+A L GH
Sbjct: 294 ---KCVATLTGH 302
Score = 138 (53.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 60/266 (22%), Positives = 116/266 (43%)
Query: 83 NTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVN 142
+T + H + C++F L+ TGS D T K W + + V + H + + ++ N
Sbjct: 171 HTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEE--VYTLRGHSAEIISLSFN 228
Query: 143 QDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSF-FDNYFLYSGSS 201
+ T S D +V +W + + + + ++ +SF +D + +GS
Sbjct: 229 TSGDRIITGSFDHTVVVWDA---DTGRKVNILI----GHCAEISSASFNWDCSLILTGSM 281
Query: 202 DGSINFWEKDKMSGGFNHGGFLQGHCFAVL--CLVAIEKLIFSGSEDTTIRVWRRAEGGC 259
D + W D +G L GH +L C KLI + S D T R++ A
Sbjct: 282 DKTCKLW--DATNG--KCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAAT--- 334
Query: 260 YHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQEKTMCLD 319
+C+A L+GH G + ++ + + ++ G S D+T ++W D + CL
Sbjct: 335 -RKCIAKLEGHEGEISKISFNPQGNHLLTG------SSDKTARIW------DAQTGQCLQ 381
Query: 320 YSDYHSNSKTTTTKMDYEMSPVLSPS 345
+ H++ + + +Y+ + V++ S
Sbjct: 382 VLEGHTD-EIFSCAFNYKGNIVITGS 406
Score = 133 (51.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 41/164 (25%), Positives = 75/164 (45%)
Query: 92 VSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTC 151
+S +F L+ TGS DKT K W + +C V + H+ + + + T
Sbjct: 264 ISSASFNWDCSLILTGSMDKTCKLWDATNGKC--VATLTGHDDEILDSCFDYTGKLIATA 321
Query: 152 SSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKD 211
S+DG+ +I+ R+ L+ + ++ ++ + N+ L +GSSD + W D
Sbjct: 322 SADGTARIFSAATRK----CIAKLEGHEGEISKISFNPQ-GNHLL-TGSSDKTARIW--D 373
Query: 212 KMSGGFNHGGFLQGHCFAVL-CLVAIE-KLIFSGSEDTTIRVWR 253
+G L+GH + C + ++ +GS+D T R+WR
Sbjct: 374 AQTGQCLQ--VLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIWR 415
Score = 38 (18.4 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 11/57 (19%), Positives = 27/57 (47%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN--MLFTTNKDCKIRIWN 55
+V TGS T ++W + E ++ E+ ++ + + + T + D + +W+
Sbjct: 191 LVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWD 247
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 177 (67.4 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 65/227 (28%), Positives = 101/227 (44%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H + V C+ F L+ +GSFD+T++ W V K CV AH ++++ N+D
Sbjct: 127 HTNFVFCVNFNPPSNLIVSGSFDETIRIWEV--KTGKCVRMIKAHSMPISSVHFNRDGSL 184
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDN-YFLYSGSSDGSIN 206
+ + S DGS KIW +E T TL +S A++ + F N F+ + D ++
Sbjct: 185 IVSASHDGSCKIWDA--KEG--TCLKTLIDDKSP--AVSFAKFSPNGKFILVATLDSTL- 237
Query: 207 FWEKDKMSGGFNHGGFLQ---GHCFAVLCL-----VAIEKLIFSGSEDTTIRVWRRAEGG 258
K+S + G FL+ GH V C+ V K I SGSED + +W
Sbjct: 238 -----KLSN-YATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQA-- 289
Query: 259 CYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWR 305
L L+GH V S+ V + LD+T ++W+
Sbjct: 290 --RNILQRLEGHTDAV----ISVSCHPVQNEISSSGNHLDKTIRIWK 330
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 41/179 (22%), Positives = 77/179 (43%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQ 143
T + H +SC+ F + LL + S DKT+ W + + + + H S ++ + +
Sbjct: 38 TLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNY--SLIHRYEGHSSGISDLAWSS 95
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFD-NYFLYSGSSD 202
D + + S D +++IW ++ + LK + N + +F + + SGS D
Sbjct: 96 DSHYTCSASDDCTLRIW------DARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFD 149
Query: 203 GSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KLIFSGSEDTTIRVWRRAEGGC 259
+I WE +G ++ H + + LI S S D + ++W EG C
Sbjct: 150 ETIRIWEVK--TGKCVR--MIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTC 204
Score = 117 (46.2 bits), Expect = 0.00031, P = 0.00031
Identities = 45/166 (27%), Positives = 77/166 (46%)
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
+DG + +S I ++ +++L + S ++ LA SS D+++ S S D
Sbjct: 53 NDGNLLASASVDKTMI---LWSATNYSLIHRYEGHSSGISDLAWSS--DSHYTCSASDDC 107
Query: 204 SINFWEKDKMSGGFNHGGFLQGHCFAVLCLV--AIEKLIFSGSEDTTIRVWRRAEGGCYH 261
++ W D S + L+GH V C+ LI SGS D TIR+W G
Sbjct: 108 TLRIW--DARSP-YECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTG---- 160
Query: 262 ECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
+C+ ++ H P+ +S+ + G L+ S+S D + K+W K
Sbjct: 161 KCVRMIKAHSMPI----SSVHFNRD--GSLIVSASHDGSCKIWDAK 200
>DICTYBASE|DDB_G0291231 [details] [associations]
symbol:mhkA "myosin heavy chain kinase A"
species:44689 "Dictyostelium discoideum" [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0006468 "protein phosphorylation"
evidence=IEA;IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0004672 "protein kinase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0018107 "peptidyl-threonine
phosphorylation" evidence=IDA] [GO:0051764 "actin crosslink
formation" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=IDA] [GO:0051017 "actin filament bundle assembly"
evidence=IDA] [GO:0051015 "actin filament binding" evidence=IDA]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0031037 "myosin II filament disassembly"
evidence=IDA;IMP] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0045159 "myosin II binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA;IC] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA;IDA] [GO:0016905 "myosin heavy chain
kinase activity" evidence=IEA;IDA] [GO:0046777 "protein
autophosphorylation" evidence=IDA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR004166
InterPro:IPR011009 InterPro:IPR015943 Pfam:PF00400 Pfam:PF02816
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS51158 SMART:SM00320
SMART:SM00811 dictyBase:DDB_G0291231 GO:GO:0005524 GO:GO:0005938
EMBL:AAFI02000177 GenomeReviews:CM000155_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF56112
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0051015 GO:GO:0046777 GO:GO:0016887 GO:GO:0051017
GO:GO:0000910 GO:GO:0051764 GO:GO:0018107 BRENDA:2.7.11.7
GO:GO:0031037 EMBL:U16856 PIR:A55532 RefSeq:XP_635119.1 PDB:3LKM
PDB:3LLA PDB:3LMH PDB:3LMI PDB:3PDT PDBsum:3LKM PDBsum:3LLA
PDBsum:3LMH PDBsum:3LMI PDBsum:3PDT ProteinModelPortal:P42527
EnsemblProtists:DDB0216274 GeneID:8628066 KEGG:ddi:DDB_G0291231
OMA:NEQVERV ProtClustDB:CLSZ2429540 EvolutionaryTrace:P42527
GO:GO:0016905 Uniprot:P42527
Length = 1146
Score = 185 (70.2 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 50/177 (28%), Positives = 84/177 (47%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQ 143
T HR + +A ++T S D T+K + C+++ V H VN +V N+
Sbjct: 907 TVNGHRKSIESIACN--SNYIFTSSPDNTIKVHIIRSGNTKCIETLVGHTGEVNCVVANE 964
Query: 144 DDGFVFTCSSDGSVKIWR-RVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSD 202
++F+CS D ++K+W ++E + K+ + LALS +L+SG +D
Sbjct: 965 K--YLFSCSYDKTIKVWDLSTFKEIKSFEGVHTKY----IKTLALSG----RYLFSGGND 1014
Query: 203 GSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGC 259
I W+ + +S FN +QGH VL L +FS S+D I++W + C
Sbjct: 1015 QIIYVWDTETLSMLFN----MQGHEDWVLSLHCTASYLFSTSKDNVIKIWDLSNFSC 1067
Score = 140 (54.3 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 52/205 (25%), Positives = 94/205 (45%)
Query: 101 EGLLYTGSFDKTVKAWRVLDKRCTCVDSFVA-HESNVNAIVVNQDDGFVFTCSSDGSVKI 159
E L++ S+DKT+K W + + + SF H + + ++ ++F+ +D + +
Sbjct: 964 EKYLFSCSYDKTIKVWDLSTFKE--IKSFEGVHTKYIKTLALS--GRYLFSGGNDQIIYV 1019
Query: 160 WRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNH 219
W ++ TL+M Q L+L +L+S S D I W+ +S F+
Sbjct: 1020 W------DTETLSMLFNMQGHEDWVLSLHCTAS--YLFSTSKDNVIKIWD---LSN-FSC 1067
Query: 220 GGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAA 279
L+GH +V V ++ ++SGSED +I+VW C + + H V+CL
Sbjct: 1068 IDTLKGHWNSVSSCVVKDRYLYSGSEDNSIKVWDLDTLECVY---TIPKSHSLGVKCL-- 1122
Query: 280 SLEMEKVVMGFLVYSSSLDQTFKVW 304
+V + S++ D + KVW
Sbjct: 1123 ------MVFNNQIISAAFDGSIKVW 1141
Score = 133 (51.9 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 51/196 (26%), Positives = 83/196 (42%)
Query: 59 SDNFRTKKVTTLPRRS-SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWR 117
SDN LP+ S +T Q R+ V+ +AF+ + LL G D T + +
Sbjct: 838 SDNTIKVGAKQLPKAEFSKKDLKCVSTIQSFRERVNSIAFFDNQKLLCAGYGDGTYRVFD 897
Query: 118 VLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKF 177
V D C+ + H ++ +I N + ++FT S D ++K+ + R + TL
Sbjct: 898 VNDN-WKCLYTVNGHRKSIESIACNSN--YIFTSSPDNTIKV--HIIRSGNTKCIETLVG 952
Query: 178 QQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQG-HCFAVLCLVAI 236
VN + + + Y L+S S D +I W+ F +G H + L
Sbjct: 953 HTGEVNCVVAN---EKY-LFSCSYDKTIKVWDLST----FKEIKSFEGVHTKYIKTLALS 1004
Query: 237 EKLIFSGSEDTTIRVW 252
+ +FSG D I VW
Sbjct: 1005 GRYLFSGGNDQIIYVW 1020
Score = 43 (20.2 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 25 IKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSDNFRTKKVTTL 70
+ + +I + N +FT++ D I++ + S N TK + TL
Sbjct: 908 VNGHRKSIESIACNSNYIFTSSPDNTIKV-HIIRSGN--TKCIETL 950
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 176 (67.0 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 66/252 (26%), Positives = 109/252 (43%)
Query: 57 TVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAW 116
T SD+ +T K+ +P + + T + H + V C F L+ +GSFD++V+ W
Sbjct: 138 TASDD-KTLKIYEVP------TVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIW 190
Query: 117 RVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLK 176
V + CV + AH V+A+ N+D + + S DG V+IW N + +
Sbjct: 191 DV--RTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTA---NGQCVKTLVD 245
Query: 177 FQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQG-HCFAVLCLVA 235
+ V + S + ++ S + D ++ W+ K + G +C V
Sbjct: 246 DENPPVAFVKFSP--NGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVT 303
Query: 236 IEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSS 295
K I SGSED I VW E + L+GH V +A+ M ++ S
Sbjct: 304 GGKWIISGSEDCKIYVWNLQT----KEVVQSLEGHTQAV--IASDCHP----MQNMIASG 353
Query: 296 SL--DQTFKVWR 305
+L D T ++WR
Sbjct: 354 ALEPDNTIRIWR 365
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 55/195 (28%), Positives = 81/195 (41%)
Query: 83 NTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVN 142
+T + H +S + F L T S DKTVK W + D +C + H+ VN +
Sbjct: 73 STIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSD--LSCERTLTGHKLGVNDFAWS 130
Query: 143 QDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSD 202
D + T S D ++KI Y + + TLK + V + + + SGS D
Sbjct: 131 ADSKSIVTASDDKTLKI----YEVPTVKMAKTLKGHTNYVFCCNFNP--QSSLVVSGSFD 184
Query: 203 GSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK---LIFSGSEDTTIRVWRRAEGGC 259
S+ W D +G L H V V+ + LI SGS D +R+W A G C
Sbjct: 185 ESVRIW--DVRTGMCVKT--LPAHSDPVSA-VSFNRDGSLITSGSYDGLVRIWDTANGQC 239
Query: 260 YHECLAVLDGHRGPV 274
++D PV
Sbjct: 240 VK---TLVDDENPPV 251
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 177 (67.4 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 58/191 (30%), Positives = 84/191 (43%)
Query: 83 NTQQQHRDCVSCMAFYHAEG-LLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVV 141
+T + HR+ V +AF + G + TGSFDKT K W V +C +F H + + +
Sbjct: 128 HTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKC--YHTFRGHTAEIVCLSF 185
Query: 142 NQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSS 201
N V T S D + K+W E TLT S ++LS + +GS
Sbjct: 186 NPQSTLVATGSMDTTAKLWDIQSGEEVFTLT------GHSAEIISLSFNTSGNRIITGSF 239
Query: 202 DGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KLIFSGSEDTTIRVWRRAEGGC 259
D ++ WE D + L GHC + V LI +GS D T ++W G
Sbjct: 240 DHTVTVWEADTGRKVYT----LIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNG-- 293
Query: 260 YHECLAVLDGH 270
+C+A L GH
Sbjct: 294 --KCVATLTGH 302
Score = 136 (52.9 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 42/164 (25%), Positives = 74/164 (45%)
Query: 92 VSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTC 151
+S F L+ TGS DKT K W ++ +C V + H+ + + + T
Sbjct: 264 ISSAVFNWDCSLILTGSMDKTCKLWDAVNGKC--VATLTGHDDEILDSCFDYTGKLIATA 321
Query: 152 SSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKD 211
S+DG+ +I+ RE L+ + ++ ++ + + L +GSSD + W D
Sbjct: 322 SADGTARIFSAATRE----CVTKLEGHEGEISKISFNPQGNR--LLTGSSDKTARIW--D 373
Query: 212 KMSGGFNHGGFLQGHCFAVL-CLVAIE-KLIFSGSEDTTIRVWR 253
+G L+GH + C + +I +GS+D T R+WR
Sbjct: 374 AQTGQCLQ--VLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIWR 415
Score = 126 (49.4 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 50/204 (24%), Positives = 85/204 (41%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H + ++F + + TGSFD TV W R V + + H + +++ V N D
Sbjct: 218 HSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRK--VYTLIGHCAEISSAVFNWDCSL 275
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFD--NYFLYSGSSDGSI 205
+ T S D + K+W V N + TL + L S FD + + S+DG+
Sbjct: 276 ILTGSMDKTCKLWDAV---NGKCVA-TLTGHDDEI----LDSCFDYTGKLIATASADGTA 327
Query: 206 NFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLA 265
+ G +G + +L+ +GS D T R+W G +CL
Sbjct: 328 RIFSAATRECVTKLEGH-EGEISKISFNPQGNRLL-TGSSDKTARIWDAQTG----QCLQ 381
Query: 266 VLDGHRGPVRCLAASLEMEKVVMG 289
VL+GH + A + + + ++ G
Sbjct: 382 VLEGHTDEIFSCAFNYKGDIIITG 405
Score = 94 (38.1 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 42/155 (27%), Positives = 62/155 (40%)
Query: 106 TGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF-VFTCSSDGSVKIWRRVY 164
TGS+D+T K W + + H + V AI N G + T S D + K+W
Sbjct: 109 TGSYDRTCKLWDTASGEE--LHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVET 166
Query: 165 RENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQ 224
+ HT F+ + + LS + + +GS D + W D SG L
Sbjct: 167 GKCYHT------FRGHTAEIVCLSFNPQSTLVATGSMDTTAKLW--DIQSG--EEVFTLT 216
Query: 225 GHCFAVLCLV--AIEKLIFSGSEDTTIRVWRRAEG 257
GH ++ L I +GS D T+ VW G
Sbjct: 217 GHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTG 251
Score = 84 (34.6 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 240 IFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQ 299
+ +GS D T R+W G +CL VL+GH + A + + G ++ + S D
Sbjct: 360 LLTGSSDKTARIWDAQTG----QCLQVLEGHTDEIFSCAFNYK------GDIIITGSKDN 409
Query: 300 TFKVWR 305
T ++WR
Sbjct: 410 TCRIWR 415
Score = 41 (19.5 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTV 58
+V TGS T ++W E + E+ ++ + N + T + D + +W
Sbjct: 191 LVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWE--- 247
Query: 59 SDNFRTKKVTTL 70
+D R KV TL
Sbjct: 248 ADTGR--KVYTL 257
>ZFIN|ZDB-GENE-010724-7 [details] [associations]
symbol:copb2 "coatomer protein complex, subunit beta
2" species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030903
"notochord development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-010724-7 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030903 CTD:9276
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:AY294011 IPI:IPI00487448 RefSeq:NP_001001940.1
UniGene:Dr.14625 ProteinModelPortal:Q6JWU7 STRING:Q6JWU7
PRIDE:Q6JWU7 GeneID:114454 KEGG:dre:114454 InParanoid:Q6JWU7
NextBio:20796938 ArrayExpress:Q6JWU7 Bgee:Q6JWU7 Uniprot:Q6JWU7
Length = 934
Score = 181 (68.8 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 54/209 (25%), Positives = 92/209 (44%)
Query: 48 DCKIRIWNFTVSDNFRTKKVTTLPRRS-SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYT 106
D +R F N+ + R ++ + + + + H D + C+A + + + T
Sbjct: 57 DLPVRASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILT 116
Query: 107 GSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSS-DGSVKIWRRVYR 165
S D +K W +K+ +C F H V IV+N D F +S D ++K+W+
Sbjct: 117 SSDDMLIKLWD-WEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQL--- 172
Query: 166 ENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQG 225
S + TL+ VN + S D +L SG+ D + W+ + L+G
Sbjct: 173 -GSSSPNFTLEGHDKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQT----LEG 227
Query: 226 HCFAVLCLVAIEKL--IFSGSEDTTIRVW 252
H V C+ +L I +GSED T+R+W
Sbjct: 228 HAQNVSCVNFHPELPIIITGSEDGTVRIW 256
Score = 130 (50.8 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 49/219 (22%), Positives = 89/219 (40%)
Query: 92 VSCMAFYHAEGLLYTGSFDKTVKA--WRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVF 149
V F + + TG+ D ++ + L++ V F AH + I V+ ++
Sbjct: 60 VRASKFVARKNWVITGADDMQIRVFNYNTLER----VHMFEAHSDYIRCIAVHPTQPYIL 115
Query: 150 TCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWE 209
T S D +K+W E + + + V + ++ +N F S S D +I W+
Sbjct: 116 TSSDDMLIKLWDW---EKKWSCSQVFEGHTHYVMQIVINPKDNNQFA-SASLDRTIKVWQ 171
Query: 210 KDKMSGGFNHGGFLQGHCFAVLCLVAI----EKLIFSGSEDTTIRVWRRAEGGCYHECLA 265
S F L+GH V C+ + + SG++D +++W C+
Sbjct: 172 LGSSSPNFT----LEGHDKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQN----KTCVQ 223
Query: 266 VLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
L+GH V C+ E+ ++ G S D T ++W
Sbjct: 224 TLEGHAQNVSCVNFHPELPIIITG------SEDGTVRIW 256
Score = 119 (46.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 36/130 (27%), Positives = 62/130 (47%)
Query: 78 SFSKSNTQQQHRDCVSCMAFYHA--EGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESN 135
S S + T + H V+C+ +Y + L +G+ D+ VK W +K TCV + H N
Sbjct: 174 SSSPNFTLEGHDKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNK--TCVQTLEGHAQN 231
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYF 195
V+ + + + + T S DG+V+IW +++ L TL + V +S +
Sbjct: 232 VSCVNFHPELPIIITGSEDGTVRIWH----SSTYRLESTLNYGMERV--WCVSGLRGSNS 285
Query: 196 LYSGSSDGSI 205
+ G +GSI
Sbjct: 286 VALGYDEGSI 295
Score = 63 (27.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 16/58 (27%), Positives = 31/58 (53%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGE-VRAILAHDNM--LFTTNKDCKIRIWNF 56
V TG+ +IRV+ + +ER + H + +R I H + T++ D I++W++
Sbjct: 72 VITGADDMQIRVFNY-NTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDDMLIKLWDW 128
Score = 43 (20.2 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 12/53 (22%), Positives = 25/53 (47%)
Query: 25 IKARHGEVRAILAHDN--MLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSS 75
+ AR V+++ H + + + + + +WN +T +V LP R+S
Sbjct: 11 LTARSDRVKSVDLHPSEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAS 63
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 174 (66.3 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 64/230 (27%), Positives = 98/230 (42%)
Query: 82 SNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVV 141
+ T + H + V C F L+ +GSFD++V+ W V K C+ + AH V+A+
Sbjct: 164 TKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDV--KTGMCIKTLPAHSDPVSAVSF 221
Query: 142 NQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSS 201
N+D + + S DG V+IW N + TL ++ A S Y L S +
Sbjct: 222 NRDGSLIASGSYDGLVRIWDTA---NGQCIK-TLVDDENPPVAFVKFSPNGKYILAS-NL 276
Query: 202 DGSINFWEKDKMSGGFNHGGFLQG-HCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCY 260
D ++ W+ K + G +C V K I SGSED I +W
Sbjct: 277 DSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQT---- 332
Query: 261 HECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSL--DQTFKVWRVKV 308
E + L+GH PV LA+ + ++ S +L D +WR V
Sbjct: 333 REIVQCLEGHTQPV--LASDCHPVQNIIA----SGALEPDNKIHIWRSDV 376
Score = 138 (53.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 57/194 (29%), Positives = 81/194 (41%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQ 143
T + H +S F L T S DKTVK W +D C + H+ VN I +
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWN-MD-HMICERTLTGHKLGVNDIAWSS 139
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
D V + S D ++KI+ V + +T TLK + V + + + SGS D
Sbjct: 140 DSRCVVSASDDKTLKIFEIV----TSRMTKTLKGHNNYVFCCNFNP--QSSLVVSGSFDE 193
Query: 204 SINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK---LIFSGSEDTTIRVWRRAEGGCY 260
S+ W D +G L H V V+ + LI SGS D +R+W A G C
Sbjct: 194 SVRIW--DVKTGMCIKT--LPAHSDPVSA-VSFNRDGSLIASGSYDGLVRIWDTANGQCI 248
Query: 261 HECLAVLDGHRGPV 274
++D PV
Sbjct: 249 K---TLVDDENPPV 259
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 174 (66.3 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 64/230 (27%), Positives = 98/230 (42%)
Query: 82 SNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVV 141
+ T + H + V C F L+ +GSFD++V+ W V K C+ + AH V+A+
Sbjct: 164 TKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDV--KTGMCIKTLPAHSDPVSAVSF 221
Query: 142 NQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSS 201
N+D + + S DG V+IW N + TL ++ A S Y L S +
Sbjct: 222 NRDGSLIASGSYDGLVRIWDTA---NGQCIK-TLVDDENPPVAFVKFSPNGKYILAS-NL 276
Query: 202 DGSINFWEKDKMSGGFNHGGFLQG-HCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCY 260
D ++ W+ K + G +C V K I SGSED I +W
Sbjct: 277 DSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQT---- 332
Query: 261 HECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSL--DQTFKVWRVKV 308
E + L+GH PV LA+ + ++ S +L D +WR V
Sbjct: 333 REIVQCLEGHTQPV--LASDCHPVQNIIA----SGALEPDNKIHIWRSDV 376
Score = 138 (53.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 57/194 (29%), Positives = 81/194 (41%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQ 143
T + H +S F L T S DKTVK W +D C + H+ VN I +
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWN-MD-HMICERTLTGHKLGVNDIAWSS 139
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
D V + S D ++KI+ V + +T TLK + V + + + SGS D
Sbjct: 140 DSRCVVSASDDKTLKIFEIV----TSRMTKTLKGHNNYVFCCNFNP--QSSLVVSGSFDE 193
Query: 204 SINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK---LIFSGSEDTTIRVWRRAEGGCY 260
S+ W D +G L H V V+ + LI SGS D +R+W A G C
Sbjct: 194 SVRIW--DVKTGMCIKT--LPAHSDPVSA-VSFNRDGSLIASGSYDGLVRIWDTANGQCI 248
Query: 261 HECLAVLDGHRGPV 274
++D PV
Sbjct: 249 K---TLVDDENPPV 259
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 183 (69.5 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 55/200 (27%), Positives = 87/200 (43%)
Query: 83 NTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVN 142
NT + H + V + F H LL + S D TVK W T H +V ++V +
Sbjct: 299 NTLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATG--TLQRMLKGHNDSVRSVVFS 356
Query: 143 QDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSD 202
D + + S+D +V+IW HT F+ + +A+S D+ L S S
Sbjct: 357 HDSRLIASGSNDRTVRIWETTTGLLRHT------FEDHEDSVMAVSFAHDSRRLASASDG 410
Query: 203 GSINFWEKDKMSGGFNHGGFLQGH--CFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCY 260
G++ W D +G + L+GH C + +L+ S S+D T+++W A G
Sbjct: 411 GNVKIW--DTRTGSLQN--VLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQ 466
Query: 261 HECLAVLDGHRGPVRCLAAS 280
L+GH VR + S
Sbjct: 467 R----TLEGHNDWVRSVVFS 482
Score = 159 (61.0 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 50/184 (27%), Positives = 82/184 (44%)
Query: 80 SKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAI 139
S N + H DCV+ ++F LL + S D+TVK W + + H V ++
Sbjct: 422 SLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATG--SLQRTLEGHNDWVRSV 479
Query: 140 VVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSG 199
V + D + + S D +VKIW + L L+ + V ++ S D+ L S
Sbjct: 480 VFSHDSRLIASASDDMTVKIWDTA----TVPLQNNLESHDNWVRSVVFSH--DSRLLASA 533
Query: 200 SSDGSINFWEKDKMSGGFNHGGFLQGHCFAV--LCLVAIEKLIFSGSEDTTIRVWRRAEG 257
S D ++ W D +G + L+GH V + +L+ S S+D T+++W A G
Sbjct: 534 SDDMTVKIW--DTATGSLENT--LEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATG 589
Query: 258 GCYH 261
H
Sbjct: 590 TVQH 593
Score = 156 (60.0 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 51/170 (30%), Positives = 77/170 (45%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H D V + F H L+ +GS D+TV+ W +F HE +V A+ D
Sbjct: 346 HNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLR--HTFEDHEDSVMAVSFAHDSRR 403
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ + S G+VKIW R S L L+ VN+++ S D+ L S S D ++
Sbjct: 404 LASASDGGNVKIWDT--RTGS--LQNVLEGHDDCVNSVSFSP--DSRLLASASDDRTVKI 457
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KLIFSGSEDTTIRVWRRA 255
W +G L+GH V +V +LI S S+D T+++W A
Sbjct: 458 WHA--ATGSLQRT--LEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTA 503
Score = 156 (60.0 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 46/173 (26%), Positives = 76/173 (43%)
Query: 80 SKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAI 139
S T + H D V + F H L+ + S D TVK W ++ +H++ V ++
Sbjct: 464 SLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTAT--VPLQNNLESHDNWVRSV 521
Query: 140 VVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSG 199
V + D + + S D +VKIW + +L TL+ VN+++ S D+ L S
Sbjct: 522 VFSHDSRLLASASDDMTVKIWDTA----TGSLENTLEGHDDRVNSVSFSP--DSRLLASA 575
Query: 200 SSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVW 252
S DG++ W +G H G L L+ S +D T+++W
Sbjct: 576 SDDGTVKIWYA--ATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIW 626
Score = 153 (58.9 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 58/218 (26%), Positives = 97/218 (44%)
Query: 66 KVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTC 125
K L +S L FS + + R V ++F H LL + S D TVK W D +
Sbjct: 241 KCAPLQVYASALLFSPAQFKGHDR-AVGSVSFSHDSRLLASASGDGTVKIW---DTATSF 296
Query: 126 VDSFV-AHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNA 184
+ + + H V ++V + D + + S DG+VKIW + TL LK SV +
Sbjct: 297 LQNTLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTA----TGTLQRMLKGHNDSVRS 352
Query: 185 LALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KLIFS 242
+ S D+ + SGS+D ++ WE +G H + H +V+ + + + S
Sbjct: 353 VVFSH--DSRLIASGSNDRTVRIWETT--TGLLRHT--FEDHEDSVMAVSFAHDSRRLAS 406
Query: 243 GSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAAS 280
S+ +++W G + VL+GH V ++ S
Sbjct: 407 ASDGGNVKIWDTRTGSLQN----VLEGHDDCVNSVSFS 440
Score = 131 (51.2 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 35/129 (27%), Positives = 57/129 (44%)
Query: 83 NTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVN 142
N + H + V + F H LL + S D TVK W + ++ H+ VN++ +
Sbjct: 509 NNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATG--SLENTLEGHDDRVNSVSFS 566
Query: 143 QDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSD 202
D + + S DG+VKIW HT F S A++L+ + L S D
Sbjct: 567 PDSRLLASASDDGTVKIWYAATGTVQHT------FDGSGRVAISLAFSHTSNLLASAMDD 620
Query: 203 GSINFWEKD 211
G++ W+ +
Sbjct: 621 GTVKIWDME 629
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 42/153 (27%), Positives = 69/153 (45%)
Query: 162 RVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGG 221
R++ + L T + + SV +A+S D+ L S S G++ W D +G +
Sbjct: 372 RIWETTTGLLRHTFEDHEDSV--MAVSFAHDSRRLASASDGGNVKIW--DTRTGSLQN-- 425
Query: 222 FLQGH--CFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAA 279
L+GH C + +L+ S S+D T+++W A G L+GH VR +
Sbjct: 426 VLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQR----TLEGHNDWVRSVVF 481
Query: 280 SLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQ 312
S + L+ S+S D T K+W +P Q
Sbjct: 482 SHDSR------LIASASDDMTVKIWDTATVPLQ 508
>DICTYBASE|DDB_G0290687 [details] [associations]
symbol:mhkC "myosin heavy chain kinase C"
species:44689 "Dictyostelium discoideum" [GO:0031037 "myosin II
filament disassembly" evidence=IMP] [GO:0005826 "actomyosin
contractile ring" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IMP] [GO:0006468 "protein phosphorylation"
evidence=IEA;ISS] [GO:0005938 "cell cortex" evidence=IEA;IDA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;ISS;IDA] [GO:0018107 "peptidyl-threonine
phosphorylation" evidence=IDA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;IC] [GO:0045159 "myosin II
binding" evidence=ISS] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0032154 "cleavage furrow"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0290687
GO:GO:0005524 GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GenomeReviews:CM000154_GR
GO:GO:0000910 GO:GO:0005826 GO:GO:0018107 GO:GO:0032154 HSSP:P16649
BRENDA:2.7.11.7 EMBL:AAFI02000166 GO:GO:0031037 GO:GO:0045159
GO:GO:0016905 ProtClustDB:CLSZ2846619 EMBL:AB079663 EMBL:AF079447
RefSeq:XP_635600.1 ProteinModelPortal:Q8MY12
EnsemblProtists:DDB0216199 GeneID:8627781 KEGG:ddi:DDB_G0290687
OMA:NTRSSIL Uniprot:Q8MY12
Length = 780
Score = 177 (67.4 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 62/217 (28%), Positives = 95/217 (43%)
Query: 104 LYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQD-DGFVFTCSSDGSVKIWRR 162
LY+GS D + W ++ + V + AH ++ A++ D + T +D VK W
Sbjct: 524 LYSGSNDGQIGVWDAVELKH--VTNIKAHGKSIRAVIKRPGFDQNILTAGADSLVKEWDI 581
Query: 163 VYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGF 222
N+ +K + + VN + + DN LY+G +D ++ W D S +
Sbjct: 582 ----NTQQTIKEIK-ESNEVNTIFIQ---DN-LLYTGCNDKTVKVW--DMRS--YECVKT 628
Query: 223 LQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLE 282
L GH A+ + A+ L+FSGS D I VW A G L GH G V+ L A
Sbjct: 629 LSGHTRAIKSVCAMGNLLFSGSNDQQIYVWNLATG----TILTNFQGHEGWVKTLYAHNN 684
Query: 283 MEKVVMGFLVYSSSLDQTFKVWRVKVMPDQEKTMCLD 319
M +YS S D+T ++W +K C D
Sbjct: 685 M--------LYSGSHDETIRIWDLKTTRCVNTIKCKD 713
Score = 115 (45.5 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 37/130 (28%), Positives = 58/130 (44%)
Query: 83 NTQQ---QHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAI 139
NTQQ + ++ + + LLYTG DKTVK W + + CV + H + ++
Sbjct: 582 NTQQTIKEIKESNEVNTIFIQDNLLYTGCNDKTVKVWDM--RSYECVKTLSGHTRAIKSV 639
Query: 140 VVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSG 199
+ +F+ S+D + +W N T T+ FQ L + N LYSG
Sbjct: 640 CAMGN--LLFSGSNDQQIYVW------NLATGTILTNFQGHEGWVKTL--YAHNNMLYSG 689
Query: 200 SSDGSINFWE 209
S D +I W+
Sbjct: 690 SHDETIRIWD 699
Score = 61 (26.5 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 17/69 (24%), Positives = 32/69 (46%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGE-VRAILAH---DNMLFTTNKDCKIRIWNFT 57
+++GS+ +I VW + IKA HG+ +RA++ D + T D ++ W+
Sbjct: 524 LYSGSNDGQIGVWDAVELKHVTNIKA-HGKSIRAVIKRPGFDQNILTAGADSLVKEWDIN 582
Query: 58 VSDNFRTKK 66
+ K
Sbjct: 583 TQQTIKEIK 591
>RGD|708344 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein), beta
polypeptide 3" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043005 "neuron projection" evidence=IDA] [GO:0044297 "cell
body" evidence=IDA] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 RGD:708344 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043005 GO:GO:0004871
GO:GO:0044297 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C
EMBL:L29090 EMBL:BC086422 IPI:IPI00204239 PIR:I53871
RefSeq:NP_068630.1 UniGene:Rn.27065 ProteinModelPortal:P52287
SMR:P52287 STRING:P52287 PhosphoSite:P52287 PRIDE:P52287
Ensembl:ENSRNOT00000021481 GeneID:60449 KEGG:rno:60449
UCSC:RGD:708344 InParanoid:P52287 NextBio:612200
ArrayExpress:P52287 Genevestigator:P52287
GermOnline:ENSRNOG00000015541 Uniprot:P52287
Length = 340
Score = 156 (60.0 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 58/220 (26%), Positives = 91/220 (41%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H +SC F ++ T S D T W + + V FV H + ++ V+ D
Sbjct: 142 HTGYLSCCRFLDDNNIV-TSSGDTTCALWDIETGQQKTV--FVGHTGDCMSLAVSPDYKL 198
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDN-YFLYSGSSDGSIN 206
+ + D S K+W RE T T +S +NA+ FF N + +GS D S
Sbjct: 199 FISGACDASAKLWD--VREG--TCRQTFTGHESDINAIC---FFPNGEAICTGSDDASCR 251
Query: 207 FWE--KDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECL 264
++ D+ ++H + G L +L+F+G +D VW + C E +
Sbjct: 252 LFDLRADQELTAYSHESIICGITSVAFSLSG--RLLFAGYDDFNCNVWDSLK--C--ERV 305
Query: 265 AVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
VL GH V CL + + G V + S D K+W
Sbjct: 306 GVLSGHDNRVSCLGVTAD------GMAVATGSWDSFLKIW 339
Score = 54 (24.1 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 41 MLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFL 77
+L + ++D K+ +W D + T KV +P RSS++
Sbjct: 69 LLVSASQDGKLIVW-----DTYTTNKVHAIPLRSSWV 100
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 174 (66.3 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 55/202 (27%), Positives = 91/202 (45%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V C+ F LL +GS D T+ W ++R V + H NV +VV+++ +
Sbjct: 260 HSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRRPLKV--YFGHTDNVLGVVVSEN--Y 315
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ + S D + ++WR + L+ +SVN++ SS + + SSD ++
Sbjct: 316 IISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQYSS--KTGLIVTASSDRTLRT 373
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVL 267
W D +G + H + C K I SGS D TIR++ + G + L +L
Sbjct: 374 W--DITTGHCIR--IIHAHQRGIACAQYNGKFIVSGSSDLTIRIFEASSG----KLLRML 425
Query: 268 DGHRGPVRCLAASLEMEKVVMG 289
GH +R + EK+V G
Sbjct: 426 QGHEDLIRTVR--FNDEKIVSG 445
Score = 130 (50.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 52/166 (31%), Positives = 69/166 (41%)
Query: 141 VNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGS 200
V DD + + S D +V +W NS + L SV L L L SGS
Sbjct: 227 VQYDDEIMVSGSKDRTVSVWD----VNSRFILYKLYGHSGSV--LCLDFCRRRNLLVSGS 280
Query: 201 SDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCY 260
SD +I W+ + F GH VL +V E I S S D T RVWR
Sbjct: 281 SDSTIIIWDWQNRRPLKVY--F--GHTDNVLGVVVSENYIISSSRDHTARVWRLDATSPA 336
Query: 261 HECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRV 306
C+ VL GH V + S + G +V +SS D+T + W +
Sbjct: 337 EACMHVLRGHLASVNSVQYSSKT-----GLIVTASS-DRTLRTWDI 376
Score = 127 (49.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 42/156 (26%), Positives = 72/156 (46%)
Query: 100 AEGLLYTGSFDKTVKAWRVLDKRC---TCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGS 156
+E + + S D T + WR LD C+ H ++VN++ + G + T SSD +
Sbjct: 312 SENYIISSSRDHTARVWR-LDATSPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRT 370
Query: 157 VKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGG 216
++ W H + + Q+ +A + + + F+ SGSSD +I +E SG
Sbjct: 371 LRTWDIT---TGHCIRIIHAHQRG----IACAQY-NGKFIVSGSSDLTIRIFEAS--SGK 420
Query: 217 FNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVW 252
LQGH + + ++ I SG D T+R+W
Sbjct: 421 LLR--MLQGHEDLIRTVRFNDEKIVSGGYDGTVRIW 454
Score = 47 (21.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 19/72 (26%), Positives = 32/72 (44%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHD-----NMLFTTNKDCKIRIWN 55
++ +GS + VW D R + +G ++L D N+L + + D I IW+
Sbjct: 233 IMVSGSKDRTVSVW---DVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWD 289
Query: 56 FTVSDNFRTKKV 67
+ N R KV
Sbjct: 290 W---QNRRPLKV 298
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 169 (64.5 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 62/214 (28%), Positives = 95/214 (44%)
Query: 104 LYTGSFDKTVKAWR--VLDKRCTCVDSFVAHESNVNAIV-----VNQDDGFVFTCSSDGS 156
L TG+ D TV+ W + D C+ F H ++V A+ VN F+ + S D +
Sbjct: 379 LATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRT 438
Query: 157 VKIWRRVYREN----SHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDK 212
+K + + N S+ T+K VNA+ +S D + S S D +I W D
Sbjct: 439 LKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSK--DGRIIASASQDKTIKLW--DS 494
Query: 213 MSGGFNHGGFLQGHCFAV-LCLV-AIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGH 270
+G G L+GH V C + + SGS D TIR+W +C+ L+GH
Sbjct: 495 STGEVV--GVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDT----QQCVQTLEGH 548
Query: 271 RGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
G + L++ + G V S++ D KVW
Sbjct: 549 TGAI------LKLIYISQGTQVVSAAADGLVKVW 576
Score = 160 (61.4 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 69/257 (26%), Positives = 114/257 (44%)
Query: 42 LFTTNKDCKIRIWNFTVSDN-FRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHA 100
L T KD +R+WN + DN ++ V T +S + + D F
Sbjct: 379 LATGAKDNTVRLWNLNIEDNVYKCIHVFT-GHTASVTAVALGPL-----DVNGYPTF--- 429
Query: 101 EGLLYTGSFDKTVKAWRV---LDKRC---TCVDSFVAHESNVNAIVVNQDDGFVFTCSSD 154
L + S D+T+K + + L+K V + AH+ +VNAI V++D + + S D
Sbjct: 430 ---LASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGRIIASASQD 486
Query: 155 GSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMS 214
++K+W ++ + L+ + V A + + F L SGS D +I W D
Sbjct: 487 KTIKLWD----SSTGEVVGVLRGHRRGVWACSFNPFSRQ--LASGSGDRTIRIWNVDTQQ 540
Query: 215 GGFNHGGFLQGHCFAVLCLVAIEK--LIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRG 272
L+GH A+L L+ I + + S + D ++VW + G EC+A LD H
Sbjct: 541 CVQT----LEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSG----ECVATLDNHED 592
Query: 273 PVRCLAASLEMEKVVMG 289
V LA+ + +V G
Sbjct: 593 RVWALASRFDGSLLVSG 609
Score = 118 (46.6 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 38/124 (30%), Positives = 57/124 (45%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
HR V +F L +GS D+T++ W V D + CV + H + ++
Sbjct: 506 HRRGVWACSFNPFSRQLASGSGDRTIRIWNV-DTQ-QCVQTLEGHTGAILKLIYISQGTQ 563
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
V + ++DG VK+W +S TL + V ALA S FD L SG +D ++
Sbjct: 564 VVSAAADGLVKVWSL----SSGECVATLDNHEDRVWALA--SRFDGSLLVSGGADAVVSV 617
Query: 208 WEKD 211
W KD
Sbjct: 618 W-KD 620
Score = 51 (23.0 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 11/63 (17%), Positives = 26/63 (41%)
Query: 4 TGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDN 61
+G+ +R+R+W + +R + + L + ++D +++WN
Sbjct: 164 SGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSA 223
Query: 62 FRT 64
RT
Sbjct: 224 VRT 226
>UNIPROTKB|P16520 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0043005
"neuron projection" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0003924 "GTPase activity" evidence=TAS] [GO:0008217 "regulation
of blood pressure" evidence=TAS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0006112 "energy reserve metabolic
process" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0071377 "cellular response to glucagon stimulus"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0006112 GO:GO:0004871 GO:GO:0008217 GO:GO:0071377
Pathway_Interaction_DB:cone_pathway EMBL:U47924 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 CTD:2784 KO:K07825 EMBL:M31328
EMBL:U47930 EMBL:Y12050 EMBL:Y12051 EMBL:Y12052 EMBL:Y12053
EMBL:Y12054 EMBL:Y12055 EMBL:Y12056 EMBL:Y12057 EMBL:Y12058
EMBL:AF501884 EMBL:BT009800 EMBL:AY631872 EMBL:BC000115
EMBL:BC002454 IPI:IPI00029143 PIR:A35096 RefSeq:NP_002066.1
UniGene:Hs.631657 ProteinModelPortal:P16520 SMR:P16520 DIP:DIP-601N
IntAct:P16520 STRING:P16520 PhosphoSite:P16520 DMDM:121011
OGP:P16520 PaxDb:P16520 PRIDE:P16520 DNASU:2784
Ensembl:ENST00000229264 GeneID:2784 KEGG:hsa:2784 UCSC:uc001qrc.3
GeneCards:GC12P007021 HGNC:HGNC:4400 HPA:HPA005645 MIM:139130
neXtProt:NX_P16520 PharmGKB:PA176 InParanoid:P16520 OMA:NMCSIYS
OrthoDB:EOG4J118C PhylomeDB:P16520 ChiTaRS:GNB3 GenomeRNAi:2784
NextBio:10967 ArrayExpress:P16520 Bgee:P16520 CleanEx:HS_GNB3
Genevestigator:P16520 GermOnline:ENSG00000111664 Uniprot:P16520
Length = 340
Score = 153 (58.9 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 57/220 (25%), Positives = 90/220 (40%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H +SC F ++ T S D T W + + V FV H + ++ V+ D
Sbjct: 142 HTGYLSCCRFLDDNNIV-TSSGDTTCALWDIETGQQKTV--FVGHTGDCMSLAVSPDFNL 198
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDN-YFLYSGSSDGSIN 206
+ + D S K+W RE T T +S +NA+ FF N + +GS D S
Sbjct: 199 FISGACDASAKLWD--VREG--TCRQTFTGHESDINAIC---FFPNGEAICTGSDDASCR 251
Query: 207 FWE--KDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECL 264
++ D+ F+H + G L +L+F+G +D VW + E +
Sbjct: 252 LFDLRADQELICFSHESIICGITSVAFSLSG--RLLFAGYDDFNCNVWDSMKS----ERV 305
Query: 265 AVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
+L GH V CL + + G V + S D K+W
Sbjct: 306 GILSGHDNRVSCLGVTAD------GMAVATGSWDSFLKIW 339
Score = 55 (24.4 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 41 MLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFL 77
+L + ++D K+ +W D++ T KV +P RSS++
Sbjct: 69 LLVSASQDGKLIVW-----DSYTTNKVHAIPLRSSWV 100
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 164 (62.8 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 55/223 (24%), Positives = 95/223 (42%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQ 143
T + H + V C F L+ +GSFD++V+ W V K C+ + AH V+A+ N+
Sbjct: 98 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV--KTGKCLKTLPAHSDPVSAVHFNR 155
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
D + + S DG +IW + TL + V+ + S + ++ + + D
Sbjct: 156 DGSLIVSSSYDGLCRIWDTASGQCLKTL---IDDDNPPVSFVKFSP--NGKYILAATLDN 210
Query: 204 SINFWEKDKMSGGFNHGGFL-QGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHE 262
++ W+ K + G + +C V K I SGSED + +W E
Sbjct: 211 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT----KE 266
Query: 263 CLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWR 305
+ L GH V A E ++ + + D+T K+W+
Sbjct: 267 IVQKLQGHTDVVISTACH-PTENIIASAALEN---DKTIKLWK 305
Score = 129 (50.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 53/221 (23%), Positives = 89/221 (40%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H+ +S +A+ LL + S DKT+K W V +C + + H + V N
Sbjct: 60 HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC--LKTLKGHSNYVFCCNFNPQSNL 117
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ + S D SV+IW + TL V+A+ + D + S S DG
Sbjct: 118 IVSGSFDESVRIWD----VKTGKCLKTLPAHSDPVSAVHFNR--DGSLIVSSSYDGLCRI 171
Query: 208 WEKDKMSGGFNHGGFLQGHC-FAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAV 266
W D SG + + + K I + + D T+++W ++G +CL
Sbjct: 172 W--DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG----KCLKT 225
Query: 267 LDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
GH+ C+ A+ V G + S S D +W ++
Sbjct: 226 YTGHKNEKYCIFANFS---VTGGKWIVSGSEDNLVYIWNLQ 263
Score = 39 (18.8 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 14/65 (21%), Positives = 29/65 (44%)
Query: 4 TGSSSTRIRVWRQPDC-VERGFIKARHGEVRAILAHD-NMLFTTNKDCKIRIWNFTVSDN 61
+ S+ I++W D E+ + G + D N+L + + D ++IW+ +
Sbjct: 36 SSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC 95
Query: 62 FRTKK 66
+T K
Sbjct: 96 LKTLK 100
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 158 (60.7 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 66/248 (26%), Positives = 104/248 (41%)
Query: 76 FLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESN 135
F F T H VS +A + + S DKT+K W V C V +F H
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYC--VKTFTGHREW 236
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYRENSHTLTMTLKFQQSSVNALALS 188
V + NQD + +CS+D +V++W + RE+ H + +S+ ++ +
Sbjct: 237 VRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEA 296
Query: 189 SFFDNY-------FLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KL 239
+ +N FL SGS D +I W+ +S G L GH V ++ +
Sbjct: 297 TGSENKKSGKPGPFLLSGSRDKTIKMWD---ISTGMCLMT-LVGHDNWVRGVLFHPGGRF 352
Query: 240 IFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQ 299
+ S ++D T+R+W C+ L H V SL+ K V + S+DQ
Sbjct: 353 VVSCADDKTLRIWDYKN----KRCMKTLSAHEHFV----TSLDFHKASP--YVVTGSVDQ 402
Query: 300 TFKVWRVK 307
T KVW +
Sbjct: 403 TVKVWECR 410
Score = 119 (46.9 bits), Expect = 0.00026, P = 0.00026
Identities = 58/232 (25%), Positives = 98/232 (42%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVD-SFVAHESNVNAIVVNQDDG 146
HR V+ + F+ L+ + S D T+K W D + + H +V I +Q
Sbjct: 107 HRSPVTRVIFHPVFSLMVSASEDATIKVW---DYEAGDFERTLKGHTDSVQDISFDQTGK 163
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
+ +CS+D ++K+W T+ +V+++A+ D+ + S S D ++
Sbjct: 164 LLASCSADMTIKLWDF----QGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTMK 217
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK--LIFSGSEDTTIRVWRRAEGGCY---- 260
WE ++ G+ F GH V + + L+ S S D T+RVW A C
Sbjct: 218 MWE---VATGYCVKTFT-GHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELR 273
Query: 261 ---H--ECLAVLDGHRGPVRCLAASLEMEKVVM-GFLVYSSSLDQTFKVWRV 306
H EC++ P A E +K G + S S D+T K+W +
Sbjct: 274 EHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDI 325
Score = 52 (23.4 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 21 ERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKK 66
E+ + V ++ H +++ + ++D I++W++ D RT K
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLK 147
>FB|FBgn0025724 [details] [associations]
symbol:beta'Cop "beta'-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=NAS] [GO:0030126 "COPI vesicle
coat" evidence=NAS] [GO:0048194 "Golgi vesicle budding"
evidence=NAS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0010883
"regulation of lipid storage" evidence=IDA] [GO:0005795 "Golgi
stack" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0010883 GO:GO:0006890
InterPro:IPR011044 SUPFAM:SSF50969 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:AJ006523 EMBL:AJ006524 EMBL:BT023906 EMBL:AY119527
RefSeq:NP_524836.2 UniGene:Dm.2980 ProteinModelPortal:O62621
SMR:O62621 DIP:DIP-22262N MINT:MINT-1636818 STRING:O62621
PaxDb:O62621 PRIDE:O62621 EnsemblMetazoa:FBtr0080469 GeneID:45757
KEGG:dme:Dmel_CG6699 CTD:45757 FlyBase:FBgn0025724
InParanoid:O62621 OrthoDB:EOG4VHHN9 PhylomeDB:O62621
ChiTaRS:beta'Cop GenomeRNAi:45757 NextBio:838315 Bgee:O62621
GermOnline:CG6699 Uniprot:O62621
Length = 914
Score = 176 (67.0 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 48/181 (26%), Positives = 82/181 (45%)
Query: 75 SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHES 134
++ + K ++ + H D + C+A + + L+ T S D +K W +K C F H
Sbjct: 85 NYNTLEKVHSFEAHSDYLRCIAVHPTQPLVLTSSDDMLIKLWN-WEKMWACQRVFEGHTH 143
Query: 135 NVNAIVVNQDDGFVFTCSS-DGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDN 193
V IV N D F +S D +VK+W+ S+ TL+ + VN + D
Sbjct: 144 YVMQIVFNPKDNNTFASASLDRTVKVWQL----GSNFANFTLEGHEKGVNCVDYYHGGDK 199
Query: 194 YFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHC--FAVLCLVAIEKLIFSGSEDTTIRV 251
+L SG+ D + W+ + L+GH + +C ++ +GSED T+R+
Sbjct: 200 PYLISGADDRLVKIWDYQNKTCVQT----LEGHAQNISAVCFHPELPIVLTGSEDGTVRI 255
Query: 252 W 252
W
Sbjct: 256 W 256
Score = 137 (53.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 37/106 (34%), Positives = 56/106 (52%)
Query: 63 RTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHA--EGLLYTGSFDKTVKAWRVLD 120
RT KV L S+F +F T + H V+C+ +YH + L +G+ D+ VK W +
Sbjct: 165 RTVKVWQLG--SNFANF----TLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQN 218
Query: 121 KRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRR-VYR 165
K TCV + H N++A+ + + V T S DG+V+IW YR
Sbjct: 219 K--TCVQTLEGHAQNISAVCFHPELPIVLTGSEDGTVRIWHSGTYR 262
Score = 63 (27.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 15/57 (26%), Positives = 28/57 (49%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN--MLFTTNKDCKIRIWNF 56
+ TGS +IRV+ + +A +R I H ++ T++ D I++WN+
Sbjct: 72 ILTGSDDMQIRVFNYNTLEKVHSFEAHSDYLRCIAVHPTQPLVLTSSDDMLIKLWNW 128
Score = 42 (19.8 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 36 LAHDNMLFTTNKDCKIRIWNF 56
+A N + T + D +IR++N+
Sbjct: 66 VARKNWILTGSDDMQIRVFNY 86
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 171 (65.3 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 80/286 (27%), Positives = 121/286 (42%)
Query: 14 WRQPDCVERGFIKARHGE-VRAILAHDNMLFTTNKDCKIRIWNFTVSDNF-----RTKKV 67
WR C R + + H + V + N+L + + D IR+WN + V
Sbjct: 259 WRHGRC--RQVVLSGHSDGVMCLQLVRNILASGSYDATIRLWNLATFQQVALLEGHSSGV 316
Query: 68 TTLP-RRSSFLSFSKSNTQQ--QHR--DCVSCMAFYHAEG---------LLYTGSFDKTV 113
T L + +S S T + +R +C+S + H + LL +GS D TV
Sbjct: 317 TCLQFDQCKLISGSMDKTIRIWNYRTSECISIL-HGHTDSVLCLTFDSTLLVSGSADCTV 375
Query: 114 KAWRVLD-KRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLT 172
K W KR T H VN++ + +D G V + S D ++KIW HT +
Sbjct: 376 KLWHFSGGKRIT----LRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFS 431
Query: 173 MTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLC 232
+ V +LAL+ D+ L+S S DG+I W+ +K H F GH V
Sbjct: 432 AHI----GPVQSLALA---DSR-LFSCSLDGTIKQWDIEKKK--CVHTLF--GHIEGVWE 479
Query: 233 LVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLA 278
+ A + SG+ D ++VW C EC+ L H PV +A
Sbjct: 480 IAADHLRLISGAHDGVVKVWE----AC--ECVHTLKNHSEPVTSVA 519
Score = 169 (64.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 61/215 (28%), Positives = 99/215 (46%)
Query: 95 MAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSD 154
M +L +GS+D T++ W + + + H S V + +Q + + S D
Sbjct: 277 MCLQLVRNILASGSYDATIRLWNLATFQQVAL--LEGHSSGVTCLQFDQCK--LISGSMD 332
Query: 155 GSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMS 214
+++IW YR S +++ L SV L L+ FD+ L SGS+D ++ W S
Sbjct: 333 KTIRIWN--YR-TSECISI-LHGHTDSV--LCLT--FDSTLLVSGSADCTVKLWH---FS 381
Query: 215 GGFNHGGFLQGHCFAV--LCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRG 272
GG L+GH V + ++ L+ SGS+D+TI++W C H H G
Sbjct: 382 GGKRIT--LRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLH----TFSAHIG 435
Query: 273 PVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
PV+ LA + ++S SLD T K W ++
Sbjct: 436 PVQSLALADSR--------LFSCSLDGTIKQWDIE 462
Score = 120 (47.3 bits), Expect = 0.00037, P = 0.00037
Identities = 31/103 (30%), Positives = 52/103 (50%)
Query: 209 EKDKMSGGFNHGG----FLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECL 264
E+ ++ + HG L GH V+CL + ++ SGS D TIR+W A + +
Sbjct: 251 ERCRVECNWRHGRCRQVVLSGHSDGVMCLQLVRNILASGSYDATIRLWNLAT----FQQV 306
Query: 265 AVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
A+L+GH V CL + K++ G S+D+T ++W +
Sbjct: 307 ALLEGHSSGVTCL--QFDQCKLISG------SMDKTIRIWNYR 341
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 164 (62.8 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 55/223 (24%), Positives = 95/223 (42%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQ 143
T + H + V C F L+ +GSFD++V+ W V K C+ + AH V+A+ N+
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV--KTGKCLKTLPAHSDPVSAVHFNR 181
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
D + + S DG +IW + TL + V+ + S + ++ + + D
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASGQCLKTL---IDDDNPPVSFVKFSP--NGKYILAATLDN 236
Query: 204 SINFWEKDKMSGGFNHGGFL-QGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHE 262
++ W+ K + G + +C V K I SGSED + +W E
Sbjct: 237 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT----KE 292
Query: 263 CLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWR 305
+ L GH V A E ++ + + D+T K+W+
Sbjct: 293 IVQKLQGHTDVVISTACH-PTENIIASAALEN---DKTIKLWK 331
Score = 129 (50.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 53/221 (23%), Positives = 89/221 (40%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H+ +S +A+ LL + S DKT+K W V +C + + H + V N
Sbjct: 86 HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC--LKTLKGHSNYVFCCNFNPQSNL 143
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ + S D SV+IW + TL V+A+ + D + S S DG
Sbjct: 144 IVSGSFDESVRIWD----VKTGKCLKTLPAHSDPVSAVHFNR--DGSLIVSSSYDGLCRI 197
Query: 208 WEKDKMSGGFNHGGFLQGHC-FAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAV 266
W D SG + + + K I + + D T+++W ++G +CL
Sbjct: 198 W--DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG----KCLKT 251
Query: 267 LDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
GH+ C+ A+ V G + S S D +W ++
Sbjct: 252 YTGHKNEKYCIFANFS---VTGGKWIVSGSEDNLVYIWNLQ 289
Score = 39 (18.8 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 14/65 (21%), Positives = 29/65 (44%)
Query: 4 TGSSSTRIRVWRQPDC-VERGFIKARHGEVRAILAHD-NMLFTTNKDCKIRIWNFTVSDN 61
+ S+ I++W D E+ + G + D N+L + + D ++IW+ +
Sbjct: 62 SSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC 121
Query: 62 FRTKK 66
+T K
Sbjct: 122 LKTLK 126
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 164 (62.8 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 55/223 (24%), Positives = 95/223 (42%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQ 143
T + H + V C F L+ +GSFD++V+ W V K C+ + AH V+A+ N+
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV--KTGKCLKTLPAHSDPVSAVHFNR 181
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
D + + S DG +IW + TL + V+ + S + ++ + + D
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASGQCLKTL---IDDDNPPVSFVKFSP--NGKYILAATLDN 236
Query: 204 SINFWEKDKMSGGFNHGGFL-QGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHE 262
++ W+ K + G + +C V K I SGSED + +W E
Sbjct: 237 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT----KE 292
Query: 263 CLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWR 305
+ L GH V A E ++ + + D+T K+W+
Sbjct: 293 IVQKLQGHTDVVISTACH-PTENIIASAALEN---DKTIKLWK 331
Score = 129 (50.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 53/221 (23%), Positives = 89/221 (40%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H+ +S +A+ LL + S DKT+K W V +C + + H + V N
Sbjct: 86 HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC--LKTLKGHSNYVFCCNFNPQSNL 143
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ + S D SV+IW + TL V+A+ + D + S S DG
Sbjct: 144 IVSGSFDESVRIWD----VKTGKCLKTLPAHSDPVSAVHFNR--DGSLIVSSSYDGLCRI 197
Query: 208 WEKDKMSGGFNHGGFLQGHC-FAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAV 266
W D SG + + + K I + + D T+++W ++G +CL
Sbjct: 198 W--DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG----KCLKT 251
Query: 267 LDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
GH+ C+ A+ V G + S S D +W ++
Sbjct: 252 YTGHKNEKYCIFANFS---VTGGKWIVSGSEDNLVYIWNLQ 289
Score = 39 (18.8 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 14/65 (21%), Positives = 29/65 (44%)
Query: 4 TGSSSTRIRVWRQPDC-VERGFIKARHGEVRAILAHD-NMLFTTNKDCKIRIWNFTVSDN 61
+ S+ I++W D E+ + G + D N+L + + D ++IW+ +
Sbjct: 62 SSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC 121
Query: 62 FRTKK 66
+T K
Sbjct: 122 LKTLK 126
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 164 (62.8 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 55/223 (24%), Positives = 95/223 (42%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQ 143
T + H + V C F L+ +GSFD++V+ W V K C+ + AH V+A+ N+
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV--KTGKCLKTLPAHSDPVSAVHFNR 181
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
D + + S DG +IW + TL + V+ + S + ++ + + D
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASGQCLKTL---IDDDNPPVSFVKFSP--NGKYILAATLDN 236
Query: 204 SINFWEKDKMSGGFNHGGFL-QGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHE 262
++ W+ K + G + +C V K I SGSED + +W E
Sbjct: 237 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT----KE 292
Query: 263 CLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWR 305
+ L GH V A E ++ + + D+T K+W+
Sbjct: 293 IVQKLQGHTDVVISTACH-PTENIIASAALEN---DKTIKLWK 331
Score = 129 (50.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 53/221 (23%), Positives = 89/221 (40%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H+ +S +A+ LL + S DKT+K W V +C + + H + V N
Sbjct: 86 HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC--LKTLKGHSNYVFCCNFNPQSNL 143
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ + S D SV+IW + TL V+A+ + D + S S DG
Sbjct: 144 IVSGSFDESVRIWD----VKTGKCLKTLPAHSDPVSAVHFNR--DGSLIVSSSYDGLCRI 197
Query: 208 WEKDKMSGGFNHGGFLQGHC-FAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAV 266
W D SG + + + K I + + D T+++W ++G +CL
Sbjct: 198 W--DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG----KCLKT 251
Query: 267 LDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
GH+ C+ A+ V G + S S D +W ++
Sbjct: 252 YTGHKNEKYCIFANFS---VTGGKWIVSGSEDNLVYIWNLQ 289
Score = 39 (18.8 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 14/65 (21%), Positives = 29/65 (44%)
Query: 4 TGSSSTRIRVWRQPDC-VERGFIKARHGEVRAILAHD-NMLFTTNKDCKIRIWNFTVSDN 61
+ S+ I++W D E+ + G + D N+L + + D ++IW+ +
Sbjct: 62 SSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC 121
Query: 62 FRTKK 66
+T K
Sbjct: 122 LKTLK 126
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 164 (62.8 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 55/223 (24%), Positives = 95/223 (42%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQ 143
T + H + V C F L+ +GSFD++V+ W V K C+ + AH V+A+ N+
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV--KTGKCLKTLPAHSDPVSAVHFNR 181
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
D + + S DG +IW + TL + V+ + S + ++ + + D
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASGQCLKTL---IDDDNPPVSFVKFSP--NGKYILAATLDN 236
Query: 204 SINFWEKDKMSGGFNHGGFL-QGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHE 262
++ W+ K + G + +C V K I SGSED + +W E
Sbjct: 237 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT----KE 292
Query: 263 CLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWR 305
+ L GH V A E ++ + + D+T K+W+
Sbjct: 293 IVQKLQGHTDVVISTACH-PTENIIASAALEN---DKTIKLWK 331
Score = 129 (50.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 53/221 (23%), Positives = 89/221 (40%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H+ +S +A+ LL + S DKT+K W V +C + + H + V N
Sbjct: 86 HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC--LKTLKGHSNYVFCCNFNPQSNL 143
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ + S D SV+IW + TL V+A+ + D + S S DG
Sbjct: 144 IVSGSFDESVRIWD----VKTGKCLKTLPAHSDPVSAVHFNR--DGSLIVSSSYDGLCRI 197
Query: 208 WEKDKMSGGFNHGGFLQGHC-FAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAV 266
W D SG + + + K I + + D T+++W ++G +CL
Sbjct: 198 W--DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG----KCLKT 251
Query: 267 LDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
GH+ C+ A+ V G + S S D +W ++
Sbjct: 252 YTGHKNEKYCIFANFS---VTGGKWIVSGSEDNLVYIWNLQ 289
Score = 39 (18.8 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 14/65 (21%), Positives = 29/65 (44%)
Query: 4 TGSSSTRIRVWRQPDC-VERGFIKARHGEVRAILAHD-NMLFTTNKDCKIRIWNFTVSDN 61
+ S+ I++W D E+ + G + D N+L + + D ++IW+ +
Sbjct: 62 SSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC 121
Query: 62 FRTKK 66
+T K
Sbjct: 122 LKTLK 126
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 164 (62.8 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 55/223 (24%), Positives = 95/223 (42%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQ 143
T + H + V C F L+ +GSFD++V+ W V K C+ + AH V+A+ N+
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV--KTGKCLKTLPAHSDPVSAVHFNR 181
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
D + + S DG +IW + TL + V+ + S + ++ + + D
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASGQCLKTL---IDDDNPPVSFVKFSP--NGKYILAATLDN 236
Query: 204 SINFWEKDKMSGGFNHGGFL-QGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHE 262
++ W+ K + G + +C V K I SGSED + +W E
Sbjct: 237 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT----KE 292
Query: 263 CLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWR 305
+ L GH V A E ++ + + D+T K+W+
Sbjct: 293 IVQKLQGHTDVVISTACH-PTENIIASAALEN---DKTIKLWK 331
Score = 129 (50.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 53/221 (23%), Positives = 89/221 (40%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H+ +S +A+ LL + S DKT+K W V +C + + H + V N
Sbjct: 86 HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC--LKTLKGHSNYVFCCNFNPQSNL 143
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ + S D SV+IW + TL V+A+ + D + S S DG
Sbjct: 144 IVSGSFDESVRIWD----VKTGKCLKTLPAHSDPVSAVHFNR--DGSLIVSSSYDGLCRI 197
Query: 208 WEKDKMSGGFNHGGFLQGHC-FAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAV 266
W D SG + + + K I + + D T+++W ++G +CL
Sbjct: 198 W--DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG----KCLKT 251
Query: 267 LDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
GH+ C+ A+ V G + S S D +W ++
Sbjct: 252 YTGHKNEKYCIFANFS---VTGGKWIVSGSEDNLVYIWNLQ 289
Score = 39 (18.8 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 14/65 (21%), Positives = 29/65 (44%)
Query: 4 TGSSSTRIRVWRQPDC-VERGFIKARHGEVRAILAHD-NMLFTTNKDCKIRIWNFTVSDN 61
+ S+ I++W D E+ + G + D N+L + + D ++IW+ +
Sbjct: 62 SSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC 121
Query: 62 FRTKK 66
+T K
Sbjct: 122 LKTLK 126
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 162 (62.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 63/262 (24%), Positives = 115/262 (43%)
Query: 1 MVFTGSSSTR-IRVWRQ-PD----CVERGFIKARH-GEVRAILAHDNMLFTTNKDCKIRI 53
++F + + IRVWR D CV +G A G V ++ + T+++DC I++
Sbjct: 399 LMFVSCAKDKSIRVWRMNKDGRVVCVAQGLGHAHGVGAVSCSRLKESFVVTSSQDCTIKV 458
Query: 54 WNFTVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTV 113
WN + ++ +K L L T++ H ++ +A + L+ TGS D+
Sbjct: 459 WN--IPESLTSKAKAALISGPETLHAQM--TERGHDKDINSVAVSPNDKLIATGSQDRLA 514
Query: 114 KAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTM 173
K W D C+ + F H+ + + + D + T S+DG++K+W +
Sbjct: 515 KLWSCPD--CSLLGVFTGHKRGIWCVQFSPVDQILATSSADGTLKLWGL----QDFSCLK 568
Query: 174 TLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCL 233
T + +SV + S L SG SDG + W K + L GH + L
Sbjct: 569 TFEGHDASVLKIIFVSRGTQ--LLSGGSDGLLKLWTI-KTNECVKT---LDGHEDKIWGL 622
Query: 234 VAIEK--LIFSGSEDTTIRVWR 253
++ ++ + S D++I +W+
Sbjct: 623 HTNKQDDMVVTASSDSSITLWK 644
Score = 152 (58.6 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 60/258 (23%), Positives = 109/258 (42%)
Query: 68 TTLPRRSSF-LSFSKSNTQQQHRDCVSCMAFYHAEGLLYTG-SFDKTVKAWRV-LDKRCT 124
T P+ F LS S H + + + + +GL++ + DK+++ WR+ D R
Sbjct: 364 TNSPQLKVFELSTSHCQILYGHTETILALDVFR-KGLMFVSCAKDKSIRVWRMNKDGRVV 422
Query: 125 CVDSFVAHESNVNAIVVNQ-DDGFVFTCSSDGSVKIW----------RRVYRENSHTL-- 171
CV + H V A+ ++ + FV T S D ++K+W + TL
Sbjct: 423 CVAQGLGHAHGVGAVSCSRLKESFVVTSSQDCTIKVWNIPESLTSKAKAALISGPETLHA 482
Query: 172 TMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVL 231
MT + +N++A+S ++ + +GS D W S G GH +
Sbjct: 483 QMTERGHDKDINSVAVSP--NDKLIATGSQDRLAKLWSCPDCS----LLGVFTGHKRGIW 536
Query: 232 CLV--AIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMG 289
C+ +++++ + S D T+++W + CL +GH V L++ V G
Sbjct: 537 CVQFSPVDQILATSSADGTLKLWGLQD----FSCLKTFEGHDASV------LKIIFVSRG 586
Query: 290 FLVYSSSLDQTFKVWRVK 307
+ S D K+W +K
Sbjct: 587 TQLLSGGSDGLLKLWTIK 604
Score = 109 (43.4 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 51/239 (21%), Positives = 99/239 (41%)
Query: 92 VSCMAFYHAEGLLYTGSFDKTVKAWRV---LDKRCTCV-----DSFVA------HESNVN 137
VSC E + T S D T+K W + L + ++ A H+ ++N
Sbjct: 437 VSCSRL--KESFVVTSSQDCTIKVWNIPESLTSKAKAALISGPETLHAQMTERGHDKDIN 494
Query: 138 AIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLY 197
++ V+ +D + T S D K+W +L + + + S + L
Sbjct: 495 SVAVSPNDKLIATGSQDRLAKLWSCP----DCSLLGVFTGHKRGIWCVQFSPV--DQILA 548
Query: 198 SGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK--LIFSGSEDTTIRVWRRA 255
+ S+DG++ W F+ +GH +VL ++ + + + SG D +++W
Sbjct: 549 TSSADGTLKLWGLQD----FSCLKTFEGHDASVLKIIFVSRGTQLLSGGSDGLLKLWTIK 604
Query: 256 EGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQEK 314
+EC+ LDGH + L + + + VV ++S D + +W+ +QE+
Sbjct: 605 T----NECVKTLDGHEDKIWGLHTNKQDDMVV------TASSDSSITLWKDVTEIEQEE 653
Score = 102 (41.0 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 26/85 (30%), Positives = 38/85 (44%)
Query: 79 FSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNA 138
FS T + H V + F L +G D +K W + K CV + HE +
Sbjct: 564 FSCLKTFEGHDASVLKIIFVSRGTQLLSGGSDGLLKLWTI--KTNECVKTLDGHEDKIWG 621
Query: 139 IVVNQDDGFVFTCSSDGSVKIWRRV 163
+ N+ D V T SSD S+ +W+ V
Sbjct: 622 LHTNKQDDMVVTASSDSSITLWKDV 646
Score = 65 (27.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 1 MVFTGSSSTRIRVWR--QPDCVERGFIKARHGEVRAILAHDNM----LFTTNKDCKIRIW 54
++ TG + I++W + C +K G V + H ++ LF+++ D KIRIW
Sbjct: 124 LLATGGCDSTIKIWDMIKQYCTHN--LKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIW 181
Query: 55 NFTVS 59
+ S
Sbjct: 182 DLNSS 186
Score = 60 (26.2 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 17/67 (25%), Positives = 28/67 (41%)
Query: 2 VFTGSSSTRIRVW--RQPDCVERGFIKARHGEVR--AILAHDNMLFTTNKDCKIRIWNFT 57
+F+ S +IR+W CV + V A A N L ++ +D +WN
Sbjct: 169 LFSSSMDYKIRIWDLNSSKCV--AVLDGHFSAVTSLAFTADGNTLISSGRDKICMVWNLK 226
Query: 58 VSDNFRT 64
++ RT
Sbjct: 227 TRESIRT 233
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 167 (63.8 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 58/191 (30%), Positives = 88/191 (46%)
Query: 83 NTQQQHRDCVSCMAFYHAEG-LLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVV 141
+T + HR+ V +AF + G + TGSFDKT K W +C +F H + + +
Sbjct: 128 HTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKC--YHTFRGHTAEIVCLSF 185
Query: 142 NQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSS 201
N V T S D + K+W E TLT L + + +L+ + D + +GS
Sbjct: 186 NPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHL----AEIISLSFDTSGDR--IITGSF 239
Query: 202 DGSINFWEKDKMSGGFNHGGFLQGHCFAVL-CLVAIE-KLIFSGSEDTTIRVWRRAEGGC 259
D ++ W D +G H L GHC + L + + LI +GS D T +W G
Sbjct: 240 DHTVVVW--DASTGRKVHT--LIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSG-- 293
Query: 260 YHECLAVLDGH 270
+C+A L GH
Sbjct: 294 --KCVATLTGH 302
Score = 125 (49.1 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 53/209 (25%), Positives = 89/209 (42%)
Query: 83 NTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVN 142
+T + H + C++F ++ TGS D T K W + V + H + + ++ +
Sbjct: 171 HTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEE--VVTLTGHLAEIISLSFD 228
Query: 143 QDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSD 202
+ T S D +V +W HTL + SS AL S+ D + +GS D
Sbjct: 229 TSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCA-EISS----ALFSW-DCSLILTGSMD 282
Query: 203 GSINFWEKDKMSGGFNHGGFLQGHCFAVL--CLVAIEKLIFSGSEDTTIRVWRRAEGGCY 260
+ W D SG L GH +L C KLI + S D T RV+
Sbjct: 283 KTCMLW--DATSG--KCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATT---- 334
Query: 261 HECLAVLDGHRGPVRCLAASLEMEKVVMG 289
+C+ L+GH G + ++ + + +++ G
Sbjct: 335 RKCITKLEGHEGEISKISFNPQGNRLLTG 363
Score = 123 (48.4 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 42/175 (24%), Positives = 74/175 (42%)
Query: 81 KSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIV 140
K +T H +S F L+ TGS DKT W +C V + H+ +
Sbjct: 253 KVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKC--VATLTGHDDEILDSC 310
Query: 141 VNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGS 200
+ + T S+DG+ RVY + L+ + ++ ++ + + L +GS
Sbjct: 311 FDYTGKLIATASADGTA----RVYNATTRKCITKLEGHEGEISKISFNPQGNR--LLTGS 364
Query: 201 SDGSINFWEKDKMSGGFNHGGFLQGHCFAVL-CLVAIE-KLIFSGSEDTTIRVWR 253
SD + W D +G L+GH + C + ++ +GS+D + R+WR
Sbjct: 365 SDKTARIW--DVQTGQCLQ--VLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIWR 415
Score = 116 (45.9 bits), Expect = 0.00058, P = 0.00058
Identities = 49/204 (24%), Positives = 83/204 (40%)
Query: 104 LYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRV 163
+ TGSFD TV W R V + + H + +++ + + D + T S D + +W
Sbjct: 234 IITGSFDHTVVVWDASTGRK--VHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDAT 291
Query: 164 YRENSHTLTMTLKFQQSSVNALALSSFFD--NYFLYSGSSDGSINFWEKDKMSGGFNHGG 221
S TL + L S FD + + S+DG+ + G
Sbjct: 292 ----SGKCVATLTGHDDEI----LDSCFDYTGKLIATASADGTARVYNATTRKCITKLEG 343
Query: 222 FLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASL 281
+G + +L+ +GS D T R+W G +CL VL+GH + A +
Sbjct: 344 H-EGEISKISFNPQGNRLL-TGSSDKTARIWDVQTG----QCLQVLEGHTDEIFSCAFNY 397
Query: 282 EMEKVVMGFLVYSSSLDQTFKVWR 305
+ G +V + S D + ++WR
Sbjct: 398 K------GNIVITGSKDNSCRIWR 415
>UNIPROTKB|E1BB14 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:DAAA02014455 IPI:IPI00703992 RefSeq:NP_001179276.1
UniGene:Bt.16171 ProteinModelPortal:E1BB14
Ensembl:ENSBTAT00000021348 GeneID:513340 KEGG:bta:513340
NextBio:20870819 Uniprot:E1BB14
Length = 340
Score = 150 (57.9 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 57/220 (25%), Positives = 90/220 (40%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H +SC F ++ T S D T W + + V FV H + ++ V+ D
Sbjct: 142 HTGYLSCCRFLDDNNIV-TSSGDTTCALWDIETGQQKTV--FVGHTGDCMSLAVSPDFRL 198
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDN-YFLYSGSSDGSIN 206
+ + D S K+W RE T T +S +NA+ FF N + +GS D S
Sbjct: 199 FISGACDASAKLWD--VREG--TCRQTFTGHESDINAIC---FFPNGEAICTGSDDASCR 251
Query: 207 FWE--KDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECL 264
++ D+ + H + G L +L+F+G +D VW + C E +
Sbjct: 252 LFDLRADQELTTYAHESIICGITSVAFSLSG--RLLFAGYDDFNCNVWDSMK--C--ERV 305
Query: 265 AVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
+L GH V CL + + G V + S D K+W
Sbjct: 306 GILSGHDNRVSCLGVTAD------GMAVATGSWDSFLKIW 339
Score = 54 (24.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 41 MLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFL 77
+L + ++D K+ +W D + T KV +P RSS++
Sbjct: 69 LLVSASQDGKLIVW-----DTYTTNKVHAIPLRSSWV 100
>UNIPROTKB|F1P8Q5 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:AAEX03015272
ProteinModelPortal:F1P8Q5 Ensembl:ENSCAFT00000023270 Uniprot:F1P8Q5
Length = 340
Score = 150 (57.9 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 56/220 (25%), Positives = 90/220 (40%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H +SC F ++ T S D T W + + V FV H + ++ V+ D
Sbjct: 142 HTGYLSCCRFLDDNNIV-TSSGDTTCALWDIETGQQKTV--FVGHTGDCMSLAVSPDFKL 198
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDN-YFLYSGSSDGSIN 206
+ + D S K+W RE T T +S +NA+ FF N + +GS D S
Sbjct: 199 FISGACDASAKLWD--VREG--TCRQTFTGHESDINAIC---FFPNGEAICTGSDDASCR 251
Query: 207 FWE--KDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECL 264
++ D+ ++ + G L +L+F+G +D +W +G E +
Sbjct: 252 LFDLRADQELTAYSDESIICGITSVAFSLSG--RLLFAGYDDFNCNIWDSMKG----ERV 305
Query: 265 AVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
+L GH V CL + + G V + S D KVW
Sbjct: 306 GILSGHDNRVSCLGVTAD------GMAVATGSWDSFLKVW 339
Score = 54 (24.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 41 MLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFL 77
+L + ++D K+ +W D + T KV +P RSS++
Sbjct: 69 LLVSASQDGKLIVW-----DTYTTNKVHAIPLRSSWV 100
>UNIPROTKB|P79147 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U52916 EMBL:AY751537 EMBL:DQ672621
RefSeq:NP_001003004.1 UniGene:Cfa.5 ProteinModelPortal:P79147
SMR:P79147 PRIDE:P79147 GeneID:403511 KEGG:cfa:403511 CTD:2784
eggNOG:NOG269251 KO:K07825 NextBio:20817024 Uniprot:P79147
Length = 340
Score = 150 (57.9 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 56/220 (25%), Positives = 90/220 (40%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H +SC F ++ T S D T W + + V FV H + ++ V+ D
Sbjct: 142 HTGYLSCCRFLDDNNIV-TSSGDTTCALWDIETGQQKTV--FVGHTGDCMSLAVSPDFKL 198
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDN-YFLYSGSSDGSIN 206
+ + D S K+W RE T T +S +NA+ FF N + +GS D S
Sbjct: 199 FISGACDASAKLWD--VREG--TCRQTFTGHESDINAIC---FFPNGEAICTGSDDASCR 251
Query: 207 FWE--KDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECL 264
++ D+ ++ + G L +L+F+G +D +W +G E +
Sbjct: 252 LFDLRADQELTAYSDESIICGITSVAFSLSG--RLLFAGYDDFNCNIWDSMKG----ERV 305
Query: 265 AVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
+L GH V CL + + G V + S D KVW
Sbjct: 306 GILSGHDNRVSCLGVTAD------GMAVATGSWDSFLKVW 339
Score = 54 (24.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 41 MLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFL 77
+L + ++D K+ +W D + T KV +P RSS++
Sbjct: 69 LLVSASQDGKLIVW-----DTYTTNKVHAIPLRSSWV 100
>UNIPROTKB|F1SLU8 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:FP325257
Ensembl:ENSSSCT00000000743 Uniprot:F1SLU8
Length = 340
Score = 150 (57.9 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 57/220 (25%), Positives = 90/220 (40%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H +SC F ++ T S D T W + + V FV H + ++ V+ D
Sbjct: 142 HTGYLSCCRFLDDNNIV-TSSGDTTCALWDIETGQQKTV--FVGHTGDCMSLAVSPDFKL 198
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDN-YFLYSGSSDGSIN 206
+ + D S K+W RE T T +S +NA+ FF N + +GS D S
Sbjct: 199 FISGACDASAKLWD--VREG--TCRQTFTGHESDINAIC---FFPNGEAICTGSDDASCR 251
Query: 207 FWE--KDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECL 264
++ D+ ++H + G L +L+F+G +D VW + C E +
Sbjct: 252 LFDLRADQELTTYSHESIICGITSVAFSLSG--RLLFAGYDDFNCNVWDSMK--C--ERV 305
Query: 265 AVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
L GH V CL + + G V + S D K+W
Sbjct: 306 GTLSGHDNRVSCLGVTAD------GMAVATGSWDSFLKIW 339
Score = 54 (24.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 41 MLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFL 77
+L + ++D K+ +W D + T KV +P RSS++
Sbjct: 69 LLVSASQDGKLIVW-----DTYTTNKVHAIPLRSSWV 100
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 149 (57.5 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 61/211 (28%), Positives = 94/211 (44%)
Query: 101 EGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF-VFTCSSDGSVKI 159
E + +GS D T++ W + +C V + H + V + Q DG V + + D VK+
Sbjct: 393 EKRVVSGSRDATLRVWDIETGQCLHV--LMGHVAAVRCV---QYDGRRVVSGAYDFMVKV 447
Query: 160 WRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNH 219
W HTL Q N + S FD + SGS D SI W+ + +G H
Sbjct: 448 WDPETETCLHTL-------QGHTNRV-YSLQFDGIHVVSGSLDTSIRVWDVE--TGNCIH 497
Query: 220 GGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDG---HRGPVRC 276
L GH + + ++ SG+ D+T+++W G +CL L G H+ V C
Sbjct: 498 T--LTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTG----QCLQTLQGPSKHQSAVTC 551
Query: 277 LAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
L + K F++ SS D T K+W +K
Sbjct: 552 L----QFNK---NFVITSSD-DGTVKLWDLK 574
Score = 149 (57.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 53/207 (25%), Positives = 92/207 (44%)
Query: 101 EGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW 160
+ ++ +GS D+T+K W + C+ + H S V + +++ V + S D ++++W
Sbjct: 353 DNIIISGSTDRTLKVWNA--ETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVW 408
Query: 161 RRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHG 220
+ H L V A+ + D + SG+ D + W+ + + H
Sbjct: 409 DIETGQCLHVL-------MGHVAAVRCVQY-DGRRVVSGAYDFMVKVWDPETET--CLHT 458
Query: 221 GFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAAS 280
LQGH V L + SGS DT+IRVW G C H L GH+ L +
Sbjct: 459 --LQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIH----TLTGHQS----LTSG 508
Query: 281 LEMEKVVMGFLVYSSSLDQTFKVWRVK 307
+E++ ++ S + D T K+W +K
Sbjct: 509 MELKDNIL----VSGNADSTVKIWDIK 531
Score = 143 (55.4 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 49/153 (32%), Positives = 67/153 (43%)
Query: 152 SSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKD 211
S D ++K+W V + TL + S DN + SGS+D ++ W +
Sbjct: 320 SDDNTLKVWSAVTGKCLRTLV-------GHTGGVWSSQMRDNIII-SGSTDRTLKVWNAE 371
Query: 212 KMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHR 271
+G H L GH V C+ EK + SGS D T+RVW G C H VL GH
Sbjct: 372 --TGECIHT--LYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLH----VLMGHV 423
Query: 272 GPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
VRC+ + +VV G + D KVW
Sbjct: 424 AAVRCV--QYDGRRVVSG------AYDFMVKVW 448
Score = 138 (53.6 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 50/199 (25%), Positives = 84/199 (42%)
Query: 63 RTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKR 122
R ++ T RR S H ++C+ F + +GS D T+K W + +
Sbjct: 279 RQHRIDTNWRRGELRSPKVLKGHDDH--VITCLQF--CGNRIVSGSDDNTLKVWSAVTGK 334
Query: 123 CTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSV 182
C + + V H V + + D + + S+D ++K+W E HTL S+V
Sbjct: 335 C--LRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYG----HTSTV 386
Query: 183 NALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFS 242
+ L + SGS D ++ W+ + +G H L GH AV C+ + + S
Sbjct: 387 RCMHLHE----KRVVSGSRDATLRVWDIE--TGQCLH--VLMGHVAAVRCVQYDGRRVVS 438
Query: 243 GSEDTTIRVWRRAEGGCYH 261
G+ D ++VW C H
Sbjct: 439 GAYDFMVKVWDPETETCLH 457
Score = 63 (27.2 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 11/57 (19%), Positives = 29/57 (50%)
Query: 1 MVFTGSSSTRIRVWRQP--DCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWN 55
++ +GS+ ++VW +C+ + VR + H+ + + ++D +R+W+
Sbjct: 355 IIISGSTDRTLKVWNAETGECIHT--LYGHTSTVRCMHLHEKRVVSGSRDATLRVWD 409
>SGD|S000000653 [details] [associations]
symbol:PWP2 "Conserved 90S pre-ribosomal component"
species:4932 "Saccharomyces cerevisiae" [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0030010 "establishment of cell polarity"
evidence=IMP] [GO:0034388 "Pwp2p-containing subcomplex of 90S
preribosome" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030515
"snoRNA binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000653 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:X59720 EMBL:BK006937 GO:GO:0000910
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030010 GO:GO:0032040
GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363 KO:K14558
OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 OrthoDB:EOG4350F7 EMBL:X78964 PIR:S44226
RefSeq:NP_009984.1 ProteinModelPortal:P25635 SMR:P25635
DIP:DIP-1868N IntAct:P25635 MINT:MINT-392472 STRING:P25635
PaxDb:P25635 PeptideAtlas:P25635 EnsemblFungi:YCR057C GeneID:850422
KEGG:sce:YCR057C CYGD:YCR057c NextBio:965992 Genevestigator:P25635
GermOnline:YCR057C GO:GO:0034388 Uniprot:P25635
Length = 923
Score = 147 (56.8 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 54/194 (27%), Positives = 85/194 (43%)
Query: 132 HESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFF 191
H + N++ + D V T S DG +K+W S T + SSV A+ +
Sbjct: 344 HFDSTNSLAYSPDGSRVVTASEDGKIKVWDIT----SGFCLATFEEHTSSVTAVQFAK-- 397
Query: 192 DNYFLYSGSSDGSINFWEKDKMSGGFNHGGF--LQGHCFAVLCLVAIEKLIFSGSEDT-T 248
++S S DG++ W+ + G +Q +C AV +++ +GS D
Sbjct: 398 RGQVMFSSSLDGTVRAWDLIRYRNFRTFTGTERIQFNCLAV---DPSGEVVCAGSLDNFD 454
Query: 249 IRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKV 308
I VW G + L L GH GPV CL S E V+ S+S D+T ++W +
Sbjct: 455 IHVWSVQTG----QLLDALSGHEGPVSCL--SFSQENSVLA----SASWDKTIRIWSIFG 504
Query: 309 MPDQEKTMCLDYSD 322
Q + + + YSD
Sbjct: 505 RSQQVEPIEV-YSD 517
Score = 141 (54.7 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 49/171 (28%), Positives = 76/171 (44%)
Query: 85 QQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQD 144
QQ H D + +A+ + T S D +K W + C+ +F H S+V A+ +
Sbjct: 341 QQGHFDSTNSLAYSPDGSRVVTASEDGKIKVWDITSG--FCLATFEEHTSSVTAVQFAKR 398
Query: 145 DGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG- 203
+F+ S DG+V+ W + N T T T + Q N LA+ + +GS D
Sbjct: 399 GQVMFSSSLDGTVRAWDLIRYRNFRTFTGTERIQ---FNCLAVDP--SGEVVCAGSLDNF 453
Query: 204 SINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK--LIFSGSEDTTIRVW 252
I+ W +G L GH V CL ++ ++ S S D TIR+W
Sbjct: 454 DIHVWSVQ--TGQLLDA--LSGHEGPVSCLSFSQENSVLASASWDKTIRIW 500
Score = 135 (52.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 76/322 (23%), Positives = 129/322 (40%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKAR---HGE--VRAILAHDN-MLFTTNKDCKIRIWN 55
+ T S ++W D E+ H + + A +HD ++T +KD + +W
Sbjct: 161 ILTTSKDLSAKIW-SVDSEEKNLAATTFNGHRDYVMGAFFSHDQEKIYTVSKDGAVFVWE 219
Query: 56 FTV--SDNFRTKKVTTLPRRSSFLS-FSKSNTQQQ----HRDCVSCMAFYHAEGLLYTGS 108
FT SD+ + + +S +S T++ ++ V C+ F+ A LL G
Sbjct: 220 FTKRPSDDDDNESEDDDKQEEVDISKYSWRITKKHFFYANQAKVKCVTFHPATRLLAVGF 279
Query: 109 FDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQD-DGFVFTCSSDGSVKIWRRVYREN 167
+ + + D T + ++ VN + VNQ + F S G + ++ ++
Sbjct: 280 TSGEFRLYDLPD--FTLIQQLSMGQNPVNTVSVNQTGEWLAFGSSKLGQLLVYE--WQSE 335
Query: 168 SHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHC 227
S+ L F S N+LA S D + + S DG I W+ ++ GF F + H
Sbjct: 336 SYILKQQGHFD--STNSLAYSP--DGSRVVTASEDGKIKVWD---ITSGFCLATF-EEHT 387
Query: 228 FAVLCLVAIEK--LIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEK 285
+V + ++ ++FS S D T+R W Y R CLA E
Sbjct: 388 SSVTAVQFAKRGQVMFSSSLDGTVRAWDLIR---YRNFRTFTGTERIQFNCLAVDPSGEV 444
Query: 286 VVMGFLVYSSSLDQTFKVWRVK 307
V G L + D VW V+
Sbjct: 445 VCAGSL---DNFD--IHVWSVQ 461
Score = 70 (29.7 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 31/117 (26%), Positives = 51/117 (43%)
Query: 2 VFTGSSSTRIRVWRQPDC-VERGFIK-ARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVS 59
+F +S +++W+ PD +R F RH V A D T ++D + + T S
Sbjct: 110 LFALASGRFLQIWKTPDVNKDRQFAPFVRH-RVHAGHFQDITSLTWSQDSRFIL---TTS 165
Query: 60 DNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAW 116
+ + K+ ++ L+ + T HRD V F H + +YT S D V W
Sbjct: 166 KDL-SAKIWSVDSEEKNLA---ATTFNGHRDYVMGAFFSHDQEKIYTVSKDGAVFVW 218
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 170 (64.9 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 58/218 (26%), Positives = 94/218 (43%)
Query: 88 HRDCVSCMAF-YHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDG 146
H V+C++ LL TG D V W + + T S H S V+++ N ++
Sbjct: 14 HSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSI--GKTTSPMSLCGHTSPVDSVAFNSEEV 71
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
V +S G +K+W E S + +S+ +A+ F + FL SGSSD ++
Sbjct: 72 LVLAGASSGVIKLWDL---EESK-MVRAFTGHRSNCSAVEFHPFGE--FLASGSSDTNLR 125
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAV 266
W+ K + G +G + + + + SG D ++VW G HE
Sbjct: 126 VWDTRKKGCIQTYKGHTRG--ISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKC- 182
Query: 267 LDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
H GP+R SL+ + FL+ + S D+T K W
Sbjct: 183 ---HEGPIR----SLDFHP--LEFLLATGSADRTVKFW 211
Score = 144 (55.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 54/187 (28%), Positives = 80/187 (42%)
Query: 121 KRCTCVDSFVAHESNVNAIVVNQDDG-FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQ 179
KR + FVAH NVN + + + + T D V +W T M+L
Sbjct: 3 KRGYKLQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSI----GKTTSPMSLCGHT 58
Query: 180 SSVNALALSSFFDNYFLYSGSSDGSINFW--EKDKMSGGFNHGGFLQGHCFAVLCLVAIE 237
S V+++A +S + + +G+S G I W E+ KM F G + +C AV
Sbjct: 59 SPVDSVAFNS--EEVLVLAGASSGVIKLWDLEESKMVRAFT--GH-RSNCSAVE-FHPFG 112
Query: 238 KLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSL 297
+ + SGS DT +RVW + GC + GH + + S + G V S L
Sbjct: 113 EFLASGSSDTNLRVWDTRKKGC----IQTYKGHTRGISTIEFSPD------GRWVVSGGL 162
Query: 298 DQTFKVW 304
D KVW
Sbjct: 163 DNVVKVW 169
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 160 (61.4 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 56/225 (24%), Positives = 96/225 (42%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQ 143
T + H + V C F L+ +GSFD++V+ W V K C+ + AH V+A+ N+
Sbjct: 124 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV--KTGKCLKTLPAHSDPVSAVHFNR 181
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
D + + S DG +IW + TL + V+ + S + ++ + + D
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASGQCLKTL---IDDDNPPVSFVKFSP--NGKYILAATLDN 236
Query: 204 SINFWE--KDKMSGGFN-HGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCY 260
++ W+ K K + H + +C V K I SGSED + +W
Sbjct: 237 TLKLWDYSKGKCLKTYTCHKN--EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT---- 290
Query: 261 HECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWR 305
E + L GH V A E ++ + + D+T K+W+
Sbjct: 291 KEVVQKLQGHTDVVISTACH-PTENIIASAALEN---DKTIKLWK 331
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 52/221 (23%), Positives = 88/221 (39%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H+ +S +A+ LL + S DKT+K W V +C + + H + V N
Sbjct: 86 HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC--LKTLKGHSNYVFCCNFNPQSNL 143
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ + S D SV+IW + TL V+A+ + D + S S DG
Sbjct: 144 IVSGSFDESVRIWD----VKTGKCLKTLPAHSDPVSAVHFNR--DGSLIVSSSYDGLCRI 197
Query: 208 WEKDKMSGGFNHGGFLQGHC-FAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAV 266
W D SG + + + K I + + D T+++W ++G +CL
Sbjct: 198 W--DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG----KCLKT 251
Query: 267 LDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
H+ C+ A+ V G + S S D +W ++
Sbjct: 252 YTCHKNEKYCIFANFS---VTGGKWIVSGSEDNLVYIWNLQ 289
Score = 39 (18.8 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 14/65 (21%), Positives = 29/65 (44%)
Query: 4 TGSSSTRIRVWRQPDC-VERGFIKARHGEVRAILAHD-NMLFTTNKDCKIRIWNFTVSDN 61
+ S+ I++W D E+ + G + D N+L + + D ++IW+ +
Sbjct: 62 SSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC 121
Query: 62 FRTKK 66
+T K
Sbjct: 122 LKTLK 126
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 161 (61.7 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 54/222 (24%), Positives = 94/222 (42%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQ 143
T + H D V C F L+ +GSFD++VK W V K C+ + AH ++A+ N
Sbjct: 118 TLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEV--KTGKCLKTLSAHSDPISAVNFNC 175
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
+ + + S DG +IW + TL V+ + S + ++ + + D
Sbjct: 176 NGSLIVSGSYDGLCRIWDAASGQCLRTLADE---GNPPVSFVKFSP--NGKYILTATLDN 230
Query: 204 SINFWEKDKMSGGFNHGGFL-QGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHE 262
++ W+ + + G + +C V K + SGSED + +W E
Sbjct: 231 TLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQT----KE 286
Query: 263 CLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
+ L GH V ++A+ K ++ + D+T KVW
Sbjct: 287 IVQRLQGHTDVV--ISAACHPTKNIIASAALEN--DKTIKVW 324
>MGI|MGI:95785 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein),
beta 3" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0043005 "neuron projection" evidence=ISO] [GO:0044297 "cell
body" evidence=ISO] [GO:0051020 "GTPase binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95785 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
EMBL:AC002397 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784
KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C EMBL:AK014789 EMBL:BC018239
EMBL:U38494 IPI:IPI00116938 RefSeq:NP_038558.1 UniGene:Mm.68889
ProteinModelPortal:Q61011 SMR:Q61011 STRING:Q61011
PhosphoSite:Q61011 PaxDb:Q61011 PRIDE:Q61011
Ensembl:ENSMUST00000024206 GeneID:14695 KEGG:mmu:14695
InParanoid:Q61011 NextBio:286643 Bgee:Q61011 Genevestigator:Q61011
GermOnline:ENSMUSG00000023439 Uniprot:Q61011
Length = 340
Score = 147 (56.8 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 56/220 (25%), Positives = 90/220 (40%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H +SC F ++ T S D T W + + V FV H + ++ V+ D
Sbjct: 142 HTGYLSCCRFLDDNNIV-TSSGDTTCALWDIETGQQKTV--FVGHTGDCMSLAVSPDYKL 198
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDN-YFLYSGSSDGSIN 206
+ + D S K+W RE T T +S +NA+ FF N + +GS D S
Sbjct: 199 FISGACDASAKLWD--VREG--TCRQTFTGHESDINAIC---FFPNGEAICTGSDDASCR 251
Query: 207 FWE--KDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECL 264
++ D+ ++ + G L +L+F+G +D VW + C E +
Sbjct: 252 LFDLRADQELTAYSQESIICGITSVAFSLSG--RLLFAGYDDFNCNVWDSLK--C--ERV 305
Query: 265 AVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
+L GH V CL + + G V + S D K+W
Sbjct: 306 GILSGHDNRVSCLGVTAD------GMAVATGSWDSFLKIW 339
Score = 54 (24.1 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 41 MLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFL 77
+L + ++D K+ +W D + T KV +P RSS++
Sbjct: 69 LLVSASQDGKLIVW-----DTYTTNKVHAIPLRSSWV 100
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 163 (62.4 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 62/196 (31%), Positives = 90/196 (45%)
Query: 83 NTQQQHRDCVSCMAFYHAEG-LLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVV 141
+T + HR+ V +AF + G + TGSFDKT K W +C +F H + + +
Sbjct: 128 HTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFY--TFRGHTAEIVCLAF 185
Query: 142 NQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSS 201
N V T S D + K+W E+ ++ TL + + +L ++ D L +GS
Sbjct: 186 NPQSTLVATGSMDTTAKLWDV---ESGEEVS-TLAGHFAEIISLCFNTTGDR--LVTGSF 239
Query: 202 DGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE---KLIFSGSEDTTIRVWRRAEGG 258
D + W D SG H L GH + C V LI + S D + +VW AEGG
Sbjct: 240 DHTAILW--DVPSGRKVH--VLSGHRGEISC-VQFNWDCSLIATASLDKSCKVWD-AEGG 293
Query: 259 CYHECLAVLDGHRGPV 274
+CLA L GH V
Sbjct: 294 ---QCLATLLGHNDEV 306
Score = 141 (54.7 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 56/203 (27%), Positives = 82/203 (40%)
Query: 104 LYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRV 163
L TGSFD T W V R V S H ++ + N D + T S D S K+W
Sbjct: 234 LVTGSFDHTAILWDVPSGRKVHVLS--GHRGEISCVQFNWDCSLIATASLDKSCKVWDA- 290
Query: 164 YRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFL 223
E L TL V + + + + + S+DG+ + D F L
Sbjct: 291 --EGGQCLA-TLLGHNDEVLDVCFN--YTGQLIATASADGTSRVFSTDT----FQCLCQL 341
Query: 224 QGHCFAV--LCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASL 281
+GH + +C A + + S D T RVW G C L VL+GH + A +
Sbjct: 342 EGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGAC----LQVLEGHSDEIFSCAFNY 397
Query: 282 EMEKVVMGFLVYSSSLDQTFKVW 304
E + ++ G S D T ++W
Sbjct: 398 EGDTIITG------SKDNTCRIW 414
Score = 121 (47.7 bits), Expect = 0.00016, P = 0.00016
Identities = 52/195 (26%), Positives = 79/195 (40%)
Query: 86 QQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDD 145
Q H ++ +AF + TGS+D+T K W + + H + V AI N
Sbjct: 89 QAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEE--LHTLEGHRNVVYAIAFNNPY 146
Query: 146 GF-VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGS 204
G V T S D + K+W E T + + + LA + + + +GS D +
Sbjct: 147 GDKVATGSFDKTCKLWSA---ETGKCF-YTFRGHTAEIVCLAFNP--QSTLVATGSMDTT 200
Query: 205 INFWEKDKMSGGFNHGGFLQGHCFAV--LCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHE 262
W+ + SG L GH + LC + +GS D T +W G H
Sbjct: 201 AKLWDVE--SG--EEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVH- 255
Query: 263 CLAVLDGHRGPVRCL 277
VL GHRG + C+
Sbjct: 256 ---VLSGHRGEISCV 267
Score = 114 (45.2 bits), Expect = 0.00097, P = 0.00097
Identities = 50/206 (24%), Positives = 86/206 (41%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQ 143
T + H + C+AF L+ TGS D T K W V + V + H + + ++ N
Sbjct: 172 TFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDV--ESGEEVSTLAGHFAEIISLCFNT 229
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
+ T S D + +W H L+ + ++ + + +D + + S D
Sbjct: 230 TGDRLVTGSFDHTAILWDVPSGRKVHVLSG----HRGEISCVQFN--WDCSLIATASLDK 283
Query: 204 SINFWEKDKMSGGFNHGGFLQGHCFAVL--CLVAIEKLIFSGSEDTTIRVWRRAEGGCYH 261
S W+ + GG L GH VL C +LI + S D T RV+
Sbjct: 284 SCKVWDAE---GGQCLATLL-GHNDEVLDVCFNYTGQLIATASADGTSRVFSTDT----F 335
Query: 262 ECLAVLDGHRGPVRCLAASLEMEKVV 287
+CL L+GH+G + + + + +V+
Sbjct: 336 QCLCQLEGHKGEISKVCFNAQGSRVL 361
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 148 (57.2 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 58/241 (24%), Positives = 101/241 (41%)
Query: 77 LSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWR--VLDKRCTCVDSFVAHES 134
LS + H D + + + + T + DK+V+ WR V R CV H +
Sbjct: 374 LSTNSCQILHGHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQGTGHSN 433
Query: 135 NVNAIVVNQ-DDGFVFTCSSDGSVKIWRRVYRENSHTLTM-----TLKFQQSSVNALALS 188
V +I ++ FV + S D +VK+W + + M T + + VN++ +S
Sbjct: 434 AVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVS 493
Query: 189 SFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLV--AIEKLIFSGSED 246
++ L SGS D + W + G +GH V + +++++ S S D
Sbjct: 494 P--NDKLLASGSQDRTAKLWALSDL----RLLGVCRGHRRGVWSVQFSPVDQILGSASAD 547
Query: 247 TTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRV 306
++R+W + CL +GH V L++ V G + SS D K+W +
Sbjct: 548 GSVRIWSIQD----FSCLKTFEGHDASV------LKIIFVSRGTQLVSSGSDGLVKLWTI 597
Query: 307 K 307
K
Sbjct: 598 K 598
Score = 128 (50.1 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 67/270 (24%), Positives = 113/270 (41%)
Query: 29 HGEVRAILAHD-----NMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFL-SFSKS 82
HG IL+ D +M T KD +R+W VS R V S+ + S + S
Sbjct: 383 HGHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSG-RVHCVAQGTGHSNAVGSIACS 441
Query: 83 NTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVN 142
+QQ VS + + +T A V+ + + AHE +VN++ V+
Sbjct: 442 RMKQQF--VVSGSQ----DCTVKVWDLPETTGAEGVMMMKARSTER--AHEKDVNSVCVS 493
Query: 143 QDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSD 202
+D + + S D + K+W + L + + V ++ S + L S S+D
Sbjct: 494 PNDKLLASGSQDRTAKLWAL----SDLRLLGVCRGHRRGVWSVQFSPV--DQILGSASAD 547
Query: 203 GSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK---LIFSGSEDTTIRVWRRAEGGC 259
GS+ W F+ +GH +VL ++ + + L+ SGS D +++W
Sbjct: 548 GSVRIWSIQD----FSCLKTFEGHDASVLKIIFVSRGTQLVSSGS-DGLVKLWTIKT--- 599
Query: 260 YHECLAVLDGHRGPVRCLAASLEMEKVVMG 289
+EC+ LD H+ V L E +V G
Sbjct: 600 -NECVRTLDAHQDKVWALHGGCRDELMVTG 628
Score = 124 (48.7 bits), Expect = 0.00022, P = 0.00022
Identities = 67/258 (25%), Positives = 103/258 (39%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSD 60
M T + +RVWR V G + V H N + + C F VS
Sbjct: 400 MFATCAKDKSVRVWRMD--VSSGRVHC----VAQGTGHSNAVGSIA--CSRMKQQFVVSG 451
Query: 61 NFR-TKKVTTLPRRSS---FLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAW 116
+ T KV LP + + +T++ H V+ + + LL +GS D+T K W
Sbjct: 452 SQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPNDKLLASGSQDRTAKLW 511
Query: 117 RVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLK 176
+ D R V H V ++ + D + + S+DGSV+IW ++ S T
Sbjct: 512 ALSDLRLLGVCR--GHRRGVWSVQFSPVDQILGSASADGSVRIWS--IQDFSCLKT---- 563
Query: 177 FQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVA- 235
F+ + L + L S SDG + W K + L H V L
Sbjct: 564 FEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWTI-KTNECVRT---LDAHQDKVWALHGG 619
Query: 236 -IEKLIFSGSEDTTIRVW 252
++L+ +GS D+TI VW
Sbjct: 620 CRDELMVTGSADSTITVW 637
Score = 102 (41.0 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 36/124 (29%), Positives = 54/124 (43%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V+ M+F LL TG D T+K W V+ + CT + V+ + + D
Sbjct: 105 HSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYCT--HNLKGSSGVVHLVEFHPDISR 162
Query: 148 V--FTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSI 205
+ F+ SSD +++IW S L+ S V ALA S D + L S D
Sbjct: 163 LQLFSSSSDCAIRIWDL----RSSRCVCVLESHYSPVTALAFSP--DGHTLVSSGRDKIC 216
Query: 206 NFWE 209
+ W+
Sbjct: 217 SVWD 220
Score = 93 (37.8 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 34/116 (29%), Positives = 52/116 (44%)
Query: 196 LYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK---LIFSGSEDTTIRVW 252
L S S+DGS+ W F+ +GH +VL ++ + + L+ SGS D +++W
Sbjct: 541 LGSASADGSVRIWSIQD----FSCLKTFEGHDASVLKIIFVSRGTQLVSSGS-DGLVKLW 595
Query: 253 RRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKV 308
+EC+ LD H+ V L E +V G S D T VW K+
Sbjct: 596 TIKT----NECVRTLDAHQDKVWALHGGCRDELMVTG------SADSTITVWTDKL 641
Score = 88 (36.0 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 30/99 (30%), Positives = 45/99 (45%)
Query: 223 LQGHCFAVLCLVAIEK--LIFSGSEDTTIRVWRR-AEGGCYHECLAVLDGHRGPVRCLAA 279
L GH +L + K + + ++D ++RVWR G H C+A GH V +A
Sbjct: 382 LHGHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSGRVH-CVAQGTGHSNAVGSIAC 440
Query: 280 SLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQEKTMCL 318
S ++ F+V S S D T KVW + E M +
Sbjct: 441 S----RMKQQFVV-SGSQDCTVKVWDLPETTGAEGVMMM 474
Score = 65 (27.9 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 1 MVFTGSSSTRIRVWR--QPDCVERGFIKARHGEVRAILAHDNM----LFTTNKDCKIRIW 54
++ TG I++W + C +K G V + H ++ LF+++ DC IRIW
Sbjct: 120 LLATGGCDGTIKLWDVIKQYCTHN--LKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIW 177
Query: 55 NFTVS 59
+ S
Sbjct: 178 DLRSS 182
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 160 (61.4 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 50/180 (27%), Positives = 83/180 (46%)
Query: 150 TCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWE 209
TC++D ++IW + L +L+ + +V +A S FL S D S + WE
Sbjct: 41 TCANDKYIQIWSKD-TNGKWGLVQSLEGHEKTVRRVAWSPC--GRFLAGASFDASTSIWE 97
Query: 210 KDKMSGGFNHGGFLQGHCFAVLCLV--AIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVL 267
K K F H L+GH + V + + L+ + S D +I +W+ + + ECL++
Sbjct: 98 KSKDELEFTHVSSLEGHTYEVKSVAWDSTGTLLATCSRDKSIWIWQMEDDNDF-ECLSIN 156
Query: 268 DGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQEKTMCLDYSDYHSNS 327
GH ++C+ E L+ SSS D T K W+ + D E C++ H +S
Sbjct: 157 SGHGQDIKCVLWHPNEE------LLASSSYDDTIKFWK-DIDGDWE---CINTLTGHESS 206
Score = 149 (57.5 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 34/127 (26%), Positives = 68/127 (53%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H + C+ ++ E LL + S+D T+K W+ +D C+++ HES++ + N+D
Sbjct: 159 HGQDIKCVLWHPNEELLASSSYDDTIKFWKDIDGDWECINTLTGHESSIWDLAFNKDGDK 218
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSS---VNALALSSFFDNYFLYSGSSDGS 204
+ +C D V W+ +EN + + KF+ + + ++ SS + + +GS+D S
Sbjct: 219 LVSCGEDKLVLFWK-FDKENEKWINI-FKFKNENSRPIYSIDWSSLTNT--IVTGSADDS 274
Query: 205 INFWEKD 211
I F+E++
Sbjct: 275 IIFYEQE 281
Score = 40 (19.1 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 15/64 (23%), Positives = 31/64 (48%)
Query: 13 VW-RQPDCVERGFIKARHG---EVRAILAHDN---MLFTTNKDCKIRIWNFTVSDNFRTK 65
+W + D +E + + G EV+++ A D+ +L T ++D I IW ++F
Sbjct: 95 IWEKSKDELEFTHVSSLEGHTYEVKSV-AWDSTGTLLATCSRDKSIWIWQMEDDNDFECL 153
Query: 66 KVTT 69
+ +
Sbjct: 154 SINS 157
>CGD|CAL0003392 [details] [associations]
symbol:PWP2 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030515 "snoRNA
binding" evidence=IEA] [GO:0034388 "Pwp2p-containing subcomplex of
90S preribosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030010 "establishment of cell polarity" evidence=IEA]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 142 (55.0 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 50/178 (28%), Positives = 77/178 (43%)
Query: 132 HESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFF 191
H ++N + + D + T S DG +KIW S MT S+V + +
Sbjct: 338 HFDSMNTLCYSPDGSRLVTGSDDGKIKIWD----VRSGFCLMTFTEHTSAVTQVQFAK-- 391
Query: 192 DNYFLYSGSSDGSINFWEKDKMSG--GFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDT-T 248
L+S S DG+I W+ + F +Q +C AV ++I GS+DT
Sbjct: 392 RGQVLFSSSLDGTIRAWDLIRFRNFKTFTATSRVQFNCLAV---DPSGEVIVGGSQDTFE 448
Query: 249 IRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRV 306
I VW G + L L GH GP+ CL E ++ S+S D+T ++W +
Sbjct: 449 IYVWSVQTG----QLLDSLTGHEGPISCLTFGKENS------ILASASWDKTIRIWNI 496
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 48/171 (28%), Positives = 74/171 (43%)
Query: 85 QQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQD 144
QQ H D ++ + + L TGS D +K W V + C+ +F H S V + +
Sbjct: 335 QQGHFDSMNTLCYSPDGSRLVTGSDDGKIKIWDV--RSGFCLMTFTEHTSAVTQVQFAKR 392
Query: 145 DGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG- 203
+F+ S DG+++ W + N T T T + Q N LA+ + GS D
Sbjct: 393 GQVLFSSSLDGTIRAWDLIRFRNFKTFTATSRVQ---FNCLAVDP--SGEVIVGGSQDTF 447
Query: 204 SINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK--LIFSGSEDTTIRVW 252
I W +G L GH + CL ++ ++ S S D TIR+W
Sbjct: 448 EIYVWSVQ--TGQLLDS--LTGHEGPISCLTFGKENSILASASWDKTIRIW 494
Score = 71 (30.1 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 30/113 (26%), Positives = 47/113 (41%)
Query: 11 IRVWRQPDCVE-RGFIK-ARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSDNFRTKKVT 68
I+VW+ PD E R F RH R H + + + R + T D T K+
Sbjct: 119 IQVWKTPDLTEDRQFAPFVRH---RIYSGHFDEVLNISWSLDSRFFISTSKD--MTAKIF 173
Query: 69 TLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDK 121
+L ++ + S HRD V F H + ++YT S D + W ++
Sbjct: 174 SLNSDEKDVAMTFSG----HRDYVINAFFSHDQEIIYTVSKDGALFKWEYTER 222
>UNIPROTKB|Q5A852 [details] [associations]
symbol:PWP2 "Putative uncharacterized protein PWP2"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 142 (55.0 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 50/178 (28%), Positives = 77/178 (43%)
Query: 132 HESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFF 191
H ++N + + D + T S DG +KIW S MT S+V + +
Sbjct: 338 HFDSMNTLCYSPDGSRLVTGSDDGKIKIWD----VRSGFCLMTFTEHTSAVTQVQFAK-- 391
Query: 192 DNYFLYSGSSDGSINFWEKDKMSG--GFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDT-T 248
L+S S DG+I W+ + F +Q +C AV ++I GS+DT
Sbjct: 392 RGQVLFSSSLDGTIRAWDLIRFRNFKTFTATSRVQFNCLAV---DPSGEVIVGGSQDTFE 448
Query: 249 IRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRV 306
I VW G + L L GH GP+ CL E ++ S+S D+T ++W +
Sbjct: 449 IYVWSVQTG----QLLDSLTGHEGPISCLTFGKENS------ILASASWDKTIRIWNI 496
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 48/171 (28%), Positives = 74/171 (43%)
Query: 85 QQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQD 144
QQ H D ++ + + L TGS D +K W V + C+ +F H S V + +
Sbjct: 335 QQGHFDSMNTLCYSPDGSRLVTGSDDGKIKIWDV--RSGFCLMTFTEHTSAVTQVQFAKR 392
Query: 145 DGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG- 203
+F+ S DG+++ W + N T T T + Q N LA+ + GS D
Sbjct: 393 GQVLFSSSLDGTIRAWDLIRFRNFKTFTATSRVQ---FNCLAVDP--SGEVIVGGSQDTF 447
Query: 204 SINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK--LIFSGSEDTTIRVW 252
I W +G L GH + CL ++ ++ S S D TIR+W
Sbjct: 448 EIYVWSVQ--TGQLLDS--LTGHEGPISCLTFGKENSILASASWDKTIRIW 494
Score = 71 (30.1 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 30/113 (26%), Positives = 47/113 (41%)
Query: 11 IRVWRQPDCVE-RGFIK-ARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSDNFRTKKVT 68
I+VW+ PD E R F RH R H + + + R + T D T K+
Sbjct: 119 IQVWKTPDLTEDRQFAPFVRH---RIYSGHFDEVLNISWSLDSRFFISTSKD--MTAKIF 173
Query: 69 TLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDK 121
+L ++ + S HRD V F H + ++YT S D + W ++
Sbjct: 174 SLNSDEKDVAMTFSG----HRDYVINAFFSHDQEIIYTVSKDGALFKWEYTER 222
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 163 (62.4 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 61/224 (27%), Positives = 89/224 (39%)
Query: 57 TVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAW 116
T + KK T+P+ + H V C+A TGS D+T+K W
Sbjct: 171 TKNSALMAKKAPTMPKPQWHPPWKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIW 230
Query: 117 RVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLK 176
+ + S H S V ++V+ ++F+C D VK W Y + +
Sbjct: 231 DLASGKLKL--SLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNK----VIRHYH 284
Query: 177 FQQSSVNALALSSFFDNYFLYSGSSDGSINFWE-KDKMSGGFNHGGFLQGHCFAVLCL-- 233
S+V L L D L + S D + W+ + K S H L GH AV +
Sbjct: 285 GHLSAVYGLDLHPTLD--VLVTCSRDSTARIWDVRTKASV---HT--LSGHTNAVATVRC 337
Query: 234 VAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCL 277
A E I +GS DTTIR+W G + L H+ VR +
Sbjct: 338 QAAEPQIITGSHDTTIRLWDLVAG----KTRVTLTNHKKSVRAV 377
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 163 (62.4 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 61/224 (27%), Positives = 89/224 (39%)
Query: 57 TVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAW 116
T + KK T+P+ + H V C+A TGS D+T+K W
Sbjct: 172 TKNSALMAKKAPTMPKPQWHPPWKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIW 231
Query: 117 RVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLK 176
+ + S H S V ++V+ ++F+C D VK W Y + +
Sbjct: 232 DLASGKLKL--SLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNK----VIRHYH 285
Query: 177 FQQSSVNALALSSFFDNYFLYSGSSDGSINFWE-KDKMSGGFNHGGFLQGHCFAVLCL-- 233
S+V L L D L + S D + W+ + K S H L GH AV +
Sbjct: 286 GHLSAVYGLDLHPTID--VLVTCSRDSTARIWDVRTKASV---HT--LSGHTNAVATVRC 338
Query: 234 VAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCL 277
A E I +GS DTTIR+W G + L H+ VR +
Sbjct: 339 QAAEPQIITGSHDTTIRLWDLVAG----KTRVTLTNHKKSVRAV 378
Score = 111 (44.1 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 44/180 (24%), Positives = 81/180 (45%)
Query: 83 NTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVN 142
+T H + V+ + AE + TGS D T++ W ++ + T V + H+ +V A+V++
Sbjct: 324 HTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGK-TRV-TLTNHKKSVRAVVLH 381
Query: 143 QDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSD 202
+ F S ++K W+ + + S L + +N L ++S D L SG+ +
Sbjct: 382 PRH-YTFASGSPDNIKQWK--FPDGS--FIQNLSGHNAIINTLTVNS--DGV-LVSGADN 433
Query: 203 GSINFWEKDKMSGGFN----HG----GFLQGHCFAVLCLV-AIEKLIFSGSEDTTIRVWR 253
G+++ W+ G+N H G L C E + + D TI+V+R
Sbjct: 434 GTMHLWD---WRTGYNFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKTIKVYR 490
Score = 50 (22.7 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 15/68 (22%), Positives = 29/68 (42%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHD-----NMLFTTNKDCKIRIWNF 56
+F+ +++ W D I+ HG + A+ D ++L T ++D RIW+
Sbjct: 261 LFSCGEDKQVKCW---DLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDV 317
Query: 57 TVSDNFRT 64
+ T
Sbjct: 318 RTKASVHT 325
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 163 (62.4 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 61/224 (27%), Positives = 89/224 (39%)
Query: 57 TVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAW 116
T + KK T+P+ + H V C+A TGS D+T+K W
Sbjct: 172 TKNSALMAKKAPTMPKPQWHPPWKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIW 231
Query: 117 RVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLK 176
+ + S H S V ++V+ ++F+C D VK W Y + +
Sbjct: 232 DLASGKLKL--SLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNK----VIRHYH 285
Query: 177 FQQSSVNALALSSFFDNYFLYSGSSDGSINFWE-KDKMSGGFNHGGFLQGHCFAVLCL-- 233
S+V L L D L + S D + W+ + K S H L GH AV +
Sbjct: 286 GHLSAVYGLDLHPTID--VLVTCSRDSTARIWDVRTKASV---HT--LSGHTNAVATVRC 338
Query: 234 VAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCL 277
A E I +GS DTTIR+W G + L H+ VR +
Sbjct: 339 QAAEPQIITGSHDTTIRLWDLVAG----KTRVTLTNHKKSVRAV 378
Score = 109 (43.4 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 44/183 (24%), Positives = 82/183 (44%)
Query: 83 NTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVN 142
+T H + V+ + AE + TGS D T++ W ++ + T V + H+ +V A+V++
Sbjct: 324 HTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGK-TRV-TLTNHKKSVRAVVLH 381
Query: 143 QDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSD 202
+ F S ++K W+ + + L + +N LA+++ D L SG+ +
Sbjct: 382 PLH-YTFASGSPDNIKQWK--FPDGG--FIQNLSGHNAIINTLAVNT--DGV-LVSGADN 433
Query: 203 GSINFWEKDKMSGGFN----HG----GFLQGHCFAVLCLV-AIEKLIFSGSEDTTIRVWR 253
G+++ W+ G+N H G L C E + + D TI+V+R
Sbjct: 434 GTMHLWD---WRTGYNFQRVHAAVQPGSLDSESGIFACAFDRSESRLLTAEADKTIKVYR 490
Query: 254 RAE 256
E
Sbjct: 491 EDE 493
Score = 50 (22.7 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 15/68 (22%), Positives = 29/68 (42%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHD-----NMLFTTNKDCKIRIWNF 56
+F+ +++ W D I+ HG + A+ D ++L T ++D RIW+
Sbjct: 261 LFSCGEDKQVKCW---DLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDV 317
Query: 57 TVSDNFRT 64
+ T
Sbjct: 318 RTKASVHT 325
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 162 (62.1 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 60/216 (27%), Positives = 87/216 (40%)
Query: 65 KKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCT 124
KK T+P+ + H V C+A TGS D+T+K W + +
Sbjct: 179 KKAPTMPKPQWHPPWKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLK 238
Query: 125 CVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNA 184
S H S V ++V+ ++F+C D VK W Y + + S+V
Sbjct: 239 L--SLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNK----VIRHYHGHLSAVYG 292
Query: 185 LALSSFFDNYFLYSGSSDGSINFWE-KDKMSGGFNHGGFLQGHCFAVLCL--VAIEKLIF 241
L L D L + S D + W+ + K S H L GH AV + A E I
Sbjct: 293 LDLHPTID--VLVTCSRDSTARIWDVRTKASV---HT--LSGHTNAVATVRCQAAEPQII 345
Query: 242 SGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCL 277
+GS DTTIR+W G + L H+ VR +
Sbjct: 346 TGSHDTTIRLWDLVAG----KTRVTLTNHKKSVRAV 377
Score = 108 (43.1 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 43/180 (23%), Positives = 81/180 (45%)
Query: 83 NTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVN 142
+T H + V+ + AE + TGS D T++ W ++ + T V + H+ +V A+V++
Sbjct: 323 HTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGK-TRV-TLTNHKKSVRAVVLH 380
Query: 143 QDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSD 202
+ F S ++K W+ + + S L + +N L ++S D L SG+ +
Sbjct: 381 PRH-YTFASGSPDNIKQWK--FPDGS--FIQNLSGHNAIINTLTVNS--DGV-LVSGADN 432
Query: 203 GSINFWEKDKMSGGFN----HG----GFLQGHCFAVLCLV-AIEKLIFSGSEDTTIRVWR 253
G+++ W+ G+N H G L C E + + D TI+V++
Sbjct: 433 GTMHLWD---WRTGYNFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKTIKVYK 489
Score = 50 (22.7 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 15/68 (22%), Positives = 29/68 (42%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHD-----NMLFTTNKDCKIRIWNF 56
+F+ +++ W D I+ HG + A+ D ++L T ++D RIW+
Sbjct: 260 LFSCGEDKQVKCW---DLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDV 316
Query: 57 TVSDNFRT 64
+ T
Sbjct: 317 RTKASVHT 324
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 162 (62.1 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 60/216 (27%), Positives = 87/216 (40%)
Query: 65 KKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCT 124
KK T+P+ + H V C+A TGS D+T+K W + +
Sbjct: 181 KKAPTMPKPQWHPPWKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLK 240
Query: 125 CVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNA 184
S H S V ++V+ ++F+C D VK W Y + + S+V
Sbjct: 241 L--SLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNK----VIRHYHGHLSAVYG 294
Query: 185 LALSSFFDNYFLYSGSSDGSINFWE-KDKMSGGFNHGGFLQGHCFAVLCL--VAIEKLIF 241
L L D L + S D + W+ + K S H L GH AV + A E I
Sbjct: 295 LDLHPTID--VLVTCSRDSTARIWDVRTKASV---HT--LSGHTNAVATVRCQAAEPQII 347
Query: 242 SGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCL 277
+GS DTTIR+W G + L H+ VR +
Sbjct: 348 TGSHDTTIRLWDLVAG----KTRVTLTNHKKSVRAV 379
Score = 108 (43.1 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 43/180 (23%), Positives = 81/180 (45%)
Query: 83 NTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVN 142
+T H + V+ + AE + TGS D T++ W ++ + T V + H+ +V A+V++
Sbjct: 325 HTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGK-TRV-TLTNHKKSVRAVVLH 382
Query: 143 QDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSD 202
+ F S ++K W+ + + S L + +N L ++S D L SG+ +
Sbjct: 383 PRH-YTFASGSPDNIKQWK--FPDGS--FIQNLSGHNAIINTLTVNS--DGV-LVSGADN 434
Query: 203 GSINFWEKDKMSGGFN----HG----GFLQGHCFAVLCLV-AIEKLIFSGSEDTTIRVWR 253
G+++ W+ G+N H G L C E + + D TI+V++
Sbjct: 435 GTMHLWD---WRTGYNFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKTIKVYK 491
Score = 50 (22.7 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 15/68 (22%), Positives = 29/68 (42%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHD-----NMLFTTNKDCKIRIWNF 56
+F+ +++ W D I+ HG + A+ D ++L T ++D RIW+
Sbjct: 262 LFSCGEDKQVKCW---DLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDV 318
Query: 57 TVSDNFRT 64
+ T
Sbjct: 319 RTKASVHT 326
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 115 (45.5 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 27/85 (31%), Positives = 40/85 (47%)
Query: 76 FLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESN 135
F F T H VS +A + + S DKT+K W V + CV +F H
Sbjct: 8 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREW 65
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIW 160
V + NQD + +CS+D +V++W
Sbjct: 66 VRMVRPNQDGTLIASCSNDQTVRVW 90
Score = 76 (31.8 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 23/70 (32%), Positives = 32/70 (45%)
Query: 238 KLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSL 297
K I S ++D T+RVW C+ L+ H V SL+ K V + S+
Sbjct: 146 KFILSCADDKTLRVWDYKN----KRCMKTLNAHEHFV----TSLDFHKTAP--YVVTGSV 195
Query: 298 DQTFKVWRVK 307
DQT KVW +
Sbjct: 196 DQTVKVWECR 205
Score = 39 (18.8 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 14/65 (21%), Positives = 30/65 (46%)
Query: 289 GFLVYSSSLDQTFKVWRVKVMPDQEKTMCLDYSDYHSNSKTTTTKMDY-EMSPVLSPSWV 347
G + S + D+T +VW D + C+ + H + T +D+ + +P + V
Sbjct: 145 GKFILSCADDKTLRVW------DYKNKRCMKTLNAHEHF---VTSLDFHKTAPYVVTGSV 195
Query: 348 EKKMK 352
++ +K
Sbjct: 196 DQTVK 200
>TAIR|locus:2155904 [details] [associations]
symbol:AT5G49200 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR000571 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00642 PROSITE:PS50082
PROSITE:PS50103 PROSITE:PS50294 SMART:SM00320 SMART:SM00356
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AB016872 HOGENOM:HOG000239729
ProtClustDB:CLSN2686199 EMBL:AJ252066 IPI:IPI00517790
RefSeq:NP_199731.1 UniGene:At.64278 ProteinModelPortal:Q9FE91
SMR:Q9FE91 STRING:Q9FE91 PRIDE:Q9FE91 EnsemblPlants:AT5G49200.1
GeneID:834979 KEGG:ath:AT5G49200 GeneFarm:3799 TAIR:At5g49200
InParanoid:Q9FE91 PhylomeDB:Q9FE91 Genevestigator:Q9FE91
Uniprot:Q9FE91
Length = 419
Score = 160 (61.4 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 48/181 (26%), Positives = 82/181 (45%)
Query: 79 FSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNA 138
F + + H V+C A +LY+GS DKT+K W + C+ + H V +
Sbjct: 248 FKYLTSLEGHSGEVTCFAV--GGQMLYSGSVDKTIKMWDL--NTLQCIMTLKQHTGTVTS 303
Query: 139 IVVNQDDGFVFTCSSDGSVKIWRRVYRENSHT-LTMTLKFQQSSVNALA-LSSFFDNYFL 196
++ D + + S DG++K+W Y EN + T + +QSSV+AL+ + +
Sbjct: 304 LLCW--DKCLISSSLDGTIKVW--AYSENGILKVVQTRRQEQSSVHALSGMHDAEAKPII 359
Query: 197 YSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAE 256
+ +G++ ++ G H A L + + L+FSG E +RVW A
Sbjct: 360 FCSYQNGTVGIFDLPSFQ---ERGRMFSTHTIATLT-IGPQGLLFSGDESGNLRVWTLAA 415
Query: 257 G 257
G
Sbjct: 416 G 416
Score = 145 (56.1 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 60/233 (25%), Positives = 104/233 (44%)
Query: 74 SSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHE 133
S F + + + H + +A L++ S D T++ W +C V S + +
Sbjct: 116 SCFPGLAMVASLEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQC--VHS-INLD 172
Query: 134 SNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDN 193
+ +++ + +VF ++K + ++ H + Q VNA+ ++ N
Sbjct: 173 AEAGSLI--SEGPWVFL-GLPNAIKAFNVQTSQDLHLQAAGVVGQ---VNAMTIA----N 222
Query: 194 YFLYSGSSDGSINFWEK--DKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRV 251
L++G+S GSI W+ D S F + L+GH V C ++++SGS D TI++
Sbjct: 223 GMLFAGTSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTCFAVGGQMLYSGSVDKTIKM 282
Query: 252 WRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
W +C+ L H G V L L +K ++ SSSLD T KVW
Sbjct: 283 WDLNT----LQCIMTLKQHTGTVTSL---LCWDKCLI-----SSSLDGTIKVW 323
Score = 114 (45.2 bits), Expect = 0.00099, P = 0.00098
Identities = 35/125 (28%), Positives = 56/125 (44%)
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTM--TLKFQQSSVNALALSSFFDN 193
VNA+ + +G +F +S GS+ +W+ S +L+ V A+
Sbjct: 215 VNAMTIA--NGMLFAGTSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTCFAVGG---- 268
Query: 194 YFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWR 253
LYSGS D +I W+ + + L+ H V L+ +K + S S D TI+VW
Sbjct: 269 QMLYSGSVDKTIKMWDLNTLQCIMT----LKQHTGTVTSLLCWDKCLISSSLDGTIKVWA 324
Query: 254 RAEGG 258
+E G
Sbjct: 325 YSENG 329
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 115 (45.5 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 27/85 (31%), Positives = 40/85 (47%)
Query: 76 FLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESN 135
F F T H VS +A + + S DKT+K W V + CV +F H
Sbjct: 11 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREW 68
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIW 160
V + NQD + +CS+D +V++W
Sbjct: 69 VRMVRPNQDGTLIASCSNDQTVRVW 93
Score = 76 (31.8 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 23/70 (32%), Positives = 32/70 (45%)
Query: 238 KLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSL 297
K I S ++D T+RVW C+ L+ H V SL+ K V + S+
Sbjct: 149 KFILSCADDKTLRVWDYKN----KRCMKTLNAHEHFV----TSLDFHKTAP--YVVTGSV 198
Query: 298 DQTFKVWRVK 307
DQT KVW +
Sbjct: 199 DQTVKVWECR 208
Score = 73 (30.8 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 13/53 (24%), Positives = 28/53 (52%)
Query: 108 SFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW 160
S D T+K W + C+ + H+ NV+++ + + + + S D ++K+W
Sbjct: 1 SADMTIKLWDF--QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMW 51
Score = 39 (18.8 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 14/65 (21%), Positives = 30/65 (46%)
Query: 289 GFLVYSSSLDQTFKVWRVKVMPDQEKTMCLDYSDYHSNSKTTTTKMDY-EMSPVLSPSWV 347
G + S + D+T +VW D + C+ + H + T +D+ + +P + V
Sbjct: 148 GKFILSCADDKTLRVW------DYKNKRCMKTLNAHEHF---VTSLDFHKTAPYVVTGSV 198
Query: 348 EKKMK 352
++ +K
Sbjct: 199 DQTVK 203
>TAIR|locus:2173103 [details] [associations]
symbol:AT5G51980 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR000571 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50103
PROSITE:PS50294 SMART:SM00320 SMART:SM00356 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB015478 HOGENOM:HOG000239729 ProtClustDB:CLSN2687444
EMBL:AJ252064 EMBL:BX831861 IPI:IPI00541710 IPI:IPI00657147
RefSeq:NP_001032059.1 RefSeq:NP_200011.1 UniGene:At.29648
UniGene:At.9328 ProteinModelPortal:Q9FNZ1 SMR:Q9FNZ1 STRING:Q9FNZ1
PaxDb:Q9FNZ1 PRIDE:Q9FNZ1 EnsemblPlants:AT5G51980.2 GeneID:835273
KEGG:ath:AT5G51980 GeneFarm:3786 TAIR:At5g51980 InParanoid:Q9FJ94
OMA:ATNCFEP PhylomeDB:Q9FNZ1 Genevestigator:Q9FNZ1 Uniprot:Q9FNZ1
Length = 443
Score = 160 (61.4 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 67/254 (26%), Positives = 101/254 (39%)
Query: 52 RIWNFTVSDNFRT-KKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFD 110
++ NF V N K L S SF+ H VS +A LYTGS D
Sbjct: 113 KVCNFWVDGNCTYGDKCRYLHCWSKGESFALLTQLDGHEKLVSGIALPSGSDKLYTGSKD 172
Query: 111 KTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHT 170
+T++ W +CT V + + ++ +G VK W N+
Sbjct: 173 ETLRVWDCASGQCTGV---LKLGGEIGCVL---SEGPWLLVGMPNLVKAWN--IETNAD- 223
Query: 171 LTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAV 230
+L V +L + + D L++G+ DGSI W + + F L GH AV
Sbjct: 224 --QSLSGPVGQVYSLVVGT--D--LLFAGTQDGSILAWRYNAATNCFEPSASLTGHTLAV 277
Query: 231 LCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGF 290
+ L ++SGS D TI+VW +C+ L H +S+ M +
Sbjct: 278 VTLYVGANRLYSGSMDKTIKVWSLDN----LQCIQTLTDH--------SSVVMSLICWDQ 325
Query: 291 LVYSSSLDQTFKVW 304
+ S SLD T K+W
Sbjct: 326 FLLSCSLDNTVKIW 339
Score = 120 (47.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 41/146 (28%), Positives = 62/146 (42%)
Query: 113 VKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLT 172
VKAW + S V ++VV D +F + DGS+ WR N +
Sbjct: 213 VKAWNI---ETNADQSLSGPVGQVYSLVVGTD--LLFAGTQDGSILAWRYNAATNCFEPS 267
Query: 173 MTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLC 232
+L +V L + + N LYSGS D +I W D + L H V+
Sbjct: 268 ASLTGHTLAVVTLYVGA---NR-LYSGSMDKTIKVWSLDNLQCIQT----LTDHSSVVMS 319
Query: 233 LVAIEKLIFSGSEDTTIRVWRRAEGG 258
L+ ++ + S S D T+++W EGG
Sbjct: 320 LICWDQFLLSCSLDNTVKIWAAIEGG 345
Score = 54 (24.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 2 VFTGSSSTRIRVWRQPDCVE---RGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWN 55
++TGS +RVW DC G +K GE+ +L+ L + ++ WN
Sbjct: 166 LYTGSKDETLRVW---DCASGQCTGVLKLG-GEIGCVLSEGPWLLVGMPNL-VKAWN 217
Score = 41 (19.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 34 AILAHDNMLFTTNKDCKIRIWN 55
A+ + + L+T +KD +R+W+
Sbjct: 158 ALPSGSDKLYTGSKDETLRVWD 179
>UNIPROTKB|G3V5X7 [details] [associations]
symbol:TEP1 "Telomerase protein component 1" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008858 InterPro:IPR015943
Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50988 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003723 GO:GO:0030529
EMBL:AL355075 InterPro:IPR007111 PROSITE:PS50837 HGNC:HGNC:11726
ChiTaRS:TEP1 InterPro:IPR025139 InterPro:IPR008850 Pfam:PF13271
Pfam:PF05386 PROSITE:PS51226 Ensembl:ENST00000556935
ArrayExpress:G3V5X7 Bgee:G3V5X7 Uniprot:G3V5X7
Length = 2519
Score = 169 (64.5 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 81/331 (24%), Positives = 145/331 (43%)
Query: 1 MVFTGSSSTRIRVWRQPDC-VERGFIKARHGE-VRAILAHDNMLFTTNKDCKIRIWNFTV 58
++ +G+ ++ W +C ++ ++ +R + V + +L + ++D +++W
Sbjct: 1874 VLVSGAEDGSLQGWALKECSLQSLWLLSRFQKPVLGLATSQELLASASEDFTVQLW---- 1929
Query: 59 SDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRV 118
+++ T P ++ F + H VSC +F G L TG D+++ W V
Sbjct: 1930 -----PRQLLTRPHKAE--DFPCGTELRGHEGPVSCCSFSTDGGSLATGGRDRSLLCWDV 1982
Query: 119 -LDKRCTCVDSFVA-HESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLK 176
K + SF A H V +D+ + +CSSDGSV +W E+ L L
Sbjct: 1983 RTPKTPVLIHSFPACHRDWVTGCAWTKDN-LLISCSSDGSVGLWDP---ESGQRLGQFLG 2038
Query: 177 FQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKD--KMSGGFNHGGFLQGHCFAVLCLV 234
QS+V+A+A + + + S S DG++ W+ +++ H G + HC A +
Sbjct: 2039 -HQSAVSAVAA---VEEHVV-SVSRDGTLKVWDHQGVELTSIPAHSGPIS-HCAAAMEPR 2092
Query: 235 AIEKLIFSGSEDTTIRVWRRAEGGCYHECLA----VLDGHRGPVRCLAASLEMEKVVMGF 290
A + GSE + V +H L L GH GPVR A S G
Sbjct: 2093 AAGQ---PGSELLVVTVGLDGATRLWHPLLVCQTHTLLGHSGPVRAAAVS-----ETSG- 2143
Query: 291 LVYSSSLDQTFKVWRVKVMPDQEKTMCLDYS 321
L+ ++S D + ++W+V P + C+ S
Sbjct: 2144 LMLTASEDGSVRLWQV---PKEADDTCIPRS 2171
>UNIPROTKB|Q99973 [details] [associations]
symbol:TEP1 "Telomerase protein component 1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0003723 "RNA
binding" evidence=ISS] [GO:0000722 "telomere maintenance via
recombination" evidence=IDA] [GO:0003720 "telomerase activity"
evidence=IDA] [GO:0005697 "telomerase holoenzyme complex"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0016363 "nuclear matrix"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008858 InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
GO:GO:0005524 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0003723
GO:GO:0016363 GO:GO:0000781 GO:GO:0000722 InterPro:IPR007111
PROSITE:PS50837 GO:GO:0005697 CleanEx:HS_TEP1 EMBL:U86136
EMBL:BC126107 EMBL:BX640983 IPI:IPI00294519 IPI:IPI00413874
RefSeq:NP_009041.2 UniGene:Hs.508835 ProteinModelPortal:Q99973
SMR:Q99973 IntAct:Q99973 STRING:Q99973 PhosphoSite:Q99973
DMDM:215273899 PaxDb:Q99973 PRIDE:Q99973 Ensembl:ENST00000262715
GeneID:7011 KEGG:hsa:7011 UCSC:uc001vxe.3 CTD:7011
GeneCards:GC14M020833 H-InvDB:HIX0026646 HGNC:HGNC:11726
HPA:HPA029206 MIM:601686 neXtProt:NX_Q99973 PharmGKB:PA36443
HOGENOM:HOG000154545 HOVERGEN:HBG059633 InParanoid:Q99973 KO:K11127
OMA:SVPDAWK OrthoDB:EOG4001HG PhylomeDB:Q99973 ChiTaRS:TEP1
GenomeRNAi:7011 NextBio:27388 ArrayExpress:Q99973 Bgee:Q99973
Genevestigator:Q99973 GermOnline:ENSG00000129566 InterPro:IPR025139
InterPro:IPR008850 Pfam:PF13271 Pfam:PF05386 PROSITE:PS51226
Uniprot:Q99973
Length = 2627
Score = 169 (64.5 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 81/331 (24%), Positives = 145/331 (43%)
Query: 1 MVFTGSSSTRIRVWRQPDC-VERGFIKARHGE-VRAILAHDNMLFTTNKDCKIRIWNFTV 58
++ +G+ ++ W +C ++ ++ +R + V + +L + ++D +++W
Sbjct: 1982 VLVSGAEDGSLQGWALKECSLQSLWLLSRFQKPVLGLATSQELLASASEDFTVQLW---- 2037
Query: 59 SDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRV 118
+++ T P ++ F + H VSC +F G L TG D+++ W V
Sbjct: 2038 -----PRQLLTRPHKAE--DFPCGTELRGHEGPVSCCSFSTDGGSLATGGRDRSLLCWDV 2090
Query: 119 -LDKRCTCVDSFVA-HESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLK 176
K + SF A H V +D+ + +CSSDGSV +W E+ L L
Sbjct: 2091 RTPKTPVLIHSFPACHRDWVTGCAWTKDN-LLISCSSDGSVGLWDP---ESGQRLGQFLG 2146
Query: 177 FQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKD--KMSGGFNHGGFLQGHCFAVLCLV 234
QS+V+A+A + + + S S DG++ W+ +++ H G + HC A +
Sbjct: 2147 -HQSAVSAVAA---VEEHVV-SVSRDGTLKVWDHQGVELTSIPAHSGPIS-HCAAAMEPR 2200
Query: 235 AIEKLIFSGSEDTTIRVWRRAEGGCYHECLA----VLDGHRGPVRCLAASLEMEKVVMGF 290
A + GSE + V +H L L GH GPVR A S G
Sbjct: 2201 AAGQ---PGSELLVVTVGLDGATRLWHPLLVCQTHTLLGHSGPVRAAAVS-----ETSG- 2251
Query: 291 LVYSSSLDQTFKVWRVKVMPDQEKTMCLDYS 321
L+ ++S D + ++W+V P + C+ S
Sbjct: 2252 LMLTASEDGSVRLWQV---PKEADDTCIPRS 2279
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 161 (61.7 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 56/204 (27%), Positives = 94/204 (46%)
Query: 104 LYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRV 163
L TG+ DKTVK W + K+ +F HE ++ ++ + D F+ + S D KIW
Sbjct: 342 LATGAEDKTVKVWDIHTKKIQ--HTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIE 399
Query: 164 YRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFL 223
+ + TL ++ V ++A+S D + +GS D + W D +G F
Sbjct: 400 KGKCAFTLGNEEVGPKNGVTSVAMSP--DGRLVAAGSLDNIVRLW--DAQTGYFLER--Y 453
Query: 224 QGHCFAVLCLVAIE---KLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAAS 280
+GH +V VA K + SGS D ++++W + C A +GH+ V +A S
Sbjct: 454 EGHLDSVYS-VAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFS 512
Query: 281 LEMEKVVMGFLVYSSSLDQTFKVW 304
+ G + S S D++ + W
Sbjct: 513 PD------GSWLISGSKDRSVQFW 530
Score = 130 (50.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 57/224 (25%), Positives = 99/224 (44%)
Query: 87 QHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRV-LDKRCTC-VD-SFVAHESNVNAIVVNQ 143
QH V C+ F + L TG +++ + + V K+ VD S + + ++ +
Sbjct: 279 QHNSVVCCVNFSNDGKYLATGC-NRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSP 337
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
D ++ T + D +VK+W + HT + F ++ +L D F+ SGS D
Sbjct: 338 DGNYLATGAEDKTVKVW------DIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDK 391
Query: 204 SINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE---KLIFSGSEDTTIRVWRRAEGGCY 260
W+ +K F G G V VA+ +L+ +GS D +R+W A+ G +
Sbjct: 392 KAKIWDIEKGKCAFTLGNEEVGPKNGVTS-VAMSPDGRLVAAGSLDNIVRLWD-AQTGYF 449
Query: 261 HECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
L +GH V +A S + + + G SLD++ K+W
Sbjct: 450 ---LERYEGHLDSVYSVAFSPDGKSLASG------SLDKSLKLW 484
Score = 121 (47.7 bits), Expect = 0.00027, P = 0.00027
Identities = 50/189 (26%), Positives = 80/189 (42%)
Query: 98 YHAEG-LLYTGSFDKTVKAWRVLDKRC--TCVDSFVAHESNVNAIVVNQDDGFVFTCSSD 154
Y ++G + +GS DK K W + +C T + V ++ V ++ ++ D V S D
Sbjct: 377 YSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLD 436
Query: 155 GSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMS 214
V++W + + L + SV ++A S D L SGS D S+ W+
Sbjct: 437 NIVRLWDA---QTGYFLER-YEGHLDSVYSVAFSP--DGKSLASGSLDKSLKLWDLSGSR 490
Query: 215 GGFNHGGFLQGHCFAVLCLVAIE---KLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHR 271
GH VL VA + SGS+D +++ W G H +L GH+
Sbjct: 491 SRSRCRATFNGHKDFVLS-VAFSPDGSWLISGSKDRSVQFWD-PRNGTTH---MMLQGHK 545
Query: 272 GPVRCLAAS 280
V +A S
Sbjct: 546 NSVISVALS 554
Score = 119 (46.9 bits), Expect = 0.00044, P = 0.00044
Identities = 45/181 (24%), Positives = 80/181 (44%)
Query: 78 SFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVN 137
+F+ N + ++ V+ +A L+ GS D V+ W + ++ + H +V
Sbjct: 404 AFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDA--QTGYFLERYEGHLDSVY 461
Query: 138 AIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLY 197
++ + D + + S D S+K+W + T + V ++A S D +L
Sbjct: 462 SVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSP--DGSWLI 519
Query: 198 SGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKL----IFS-GSEDTTIRVW 252
SGS D S+ FW+ G H LQGH +V+ + K +F+ GS D R+W
Sbjct: 520 SGSKDRSVQFWDP---RNGTTHM-MLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLW 575
Query: 253 R 253
+
Sbjct: 576 K 576
Score = 117 (46.2 bits), Expect = 0.00074, P = 0.00074
Identities = 36/127 (28%), Positives = 63/127 (49%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCT--CVDSFVAHESNVNAIVVNQDD 145
H D V +AF L +GS DK++K W + R C +F H+ V ++ + D
Sbjct: 456 HLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDG 515
Query: 146 GFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYS-GSSDGS 204
++ + S D SV+ W + T M L+ ++SV ++ALS +++ +++ GS D
Sbjct: 516 SWLISGSKDRSVQFWD----PRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFR 571
Query: 205 INFWEKD 211
W+ D
Sbjct: 572 SRLWKYD 578
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 149 (57.5 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 70/234 (29%), Positives = 99/234 (42%)
Query: 57 TVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAW 116
T SD+ +T KV + R FL FS S QH + V C F L+ + S DKTVK W
Sbjct: 120 TASDD-KTVKVWST-HRQKFL-FSLS----QHINWVRCARFSPDGRLIVSASDDKTVKLW 172
Query: 117 RVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLK 176
+ C V S+ H V + + + S D +VK+W +H L +
Sbjct: 173 DKTSREC--VHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWD----VRTHRLLQHYQ 226
Query: 177 FQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAI 236
++VNAL+ NY L + SSD ++ D M G + L GH VA
Sbjct: 227 LHSAAVNALSFHPS-GNYLL-TASSDSTLKIL--DLMEGRLLYT--LHGHQ-GPATTVAF 279
Query: 237 EKL---IFSGSEDTTIRVWR-RAEGGCYHECLAVLDGHRGPVRCLAASLEMEKV 286
+ SG D + VW+ + Y E + V HR P LA S + +V
Sbjct: 280 SRTGEYFASGGSDEQVMVWKSNFDVVDYREVIKV---HRPPAP-LATSGNLPEV 329
Score = 146 (56.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 49/171 (28%), Positives = 77/171 (45%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H+D V+C+ F + LL +GS DKTV+ W K + V F AH + V ++ D
Sbjct: 60 HKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTV--FRAHTATVRSVHFCSDGQS 117
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFF-DNYFLYSGSSDGSIN 206
+ T S D +VK+W ++H Q +N + + F D + S S D ++
Sbjct: 118 LVTASDDKTVKVW------STHRQKFLFSLSQH-INWVRCARFSPDGRLIVSASDDKTVK 170
Query: 207 FWEKDK---MSGGFNHGGFLQGHCF--AVLCLVAIEKLIFSGSEDTTIRVW 252
W+K + HGGF+ F + C+ A S D T++VW
Sbjct: 171 LWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAA-------ASMDNTVKVW 214
Score = 50 (22.7 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 13/57 (22%), Positives = 26/57 (45%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAI-LAHDNM-LFTTNKDCKIRIWN 55
++ +GS +R+W E +A VR++ D L T + D +++W+
Sbjct: 75 LLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWS 131
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 160 (61.4 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 59/216 (27%), Positives = 87/216 (40%)
Query: 65 KKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCT 124
KK T+P+ + H V C+A TGS D+T+K W + +
Sbjct: 182 KKAPTMPKPQWHPPWKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLK 241
Query: 125 CVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNA 184
S H S V ++V+ ++F+C D VK W Y + + S+V
Sbjct: 242 L--SLTGHISTVRGVIVSARSPYLFSCGEDKQVKCWDLEYNK----VIRHYHGHLSAVYG 295
Query: 185 LALSSFFDNYFLYSGSSDGSINFWE-KDKMSGGFNHGGFLQGHCFAVLCLV--AIEKLIF 241
L L D L + S D + W+ + K S H L GH AV + A E +
Sbjct: 296 LDLHPTID--VLVTCSRDSTARIWDVRTKASV---HT--LSGHTNAVATVKCQAAEPQVV 348
Query: 242 SGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCL 277
+GS DTTIR+W G + L H+ VR +
Sbjct: 349 TGSHDTTIRLWDLVAG----KTRVTLTNHKKSVRAV 380
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 165 (63.1 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 55/191 (28%), Positives = 92/191 (48%)
Query: 104 LYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRV 163
L TGS+D T+K W++ D CV + H V A+V D+ + + D ++K+W
Sbjct: 396 LMTGSYDTTIKIWKI-DSG-ECVKTLTGHTKGVRALVF--DNQKLISGGLDSTIKVW--- 448
Query: 164 YRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFL 223
N HT + + +A+ +S F N + SGS+D ++ W D + + L
Sbjct: 449 ---NYHT-GQCIATYRGHEDAV-VSVDFTNKSIVSGSADHTVRVWHVDSRTC-YT----L 498
Query: 224 QGHCFAV--LCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVL-----DGHRGPVRC 276
+GH V + + + IFS S+DTTIR+W +EC+ V +GH G V+C
Sbjct: 499 RGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNS----NECIKVFGGMENNGHIGQVQC 554
Query: 277 LAASLEMEKVV 287
+ E+++
Sbjct: 555 IIPFTYKEELI 565
Score = 128 (50.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 53/179 (29%), Positives = 76/179 (42%)
Query: 126 VDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNAL 185
+ +F H V + N+ ++ T S D ++KIW+ E TLT K V AL
Sbjct: 376 IKTFTGHSDGVTCLQFNRK--YLMTGSYDTTIKIWKIDSGECVKTLTGHTK----GVRAL 429
Query: 186 ALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSE 245
FDN L SG D +I W G + +GH AV+ + K I SGS
Sbjct: 430 V----FDNQKLISGGLDSTIKVWNYHT---GQCIATY-RGHEDAVVSVDFTNKSIVSGSA 481
Query: 246 DTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
D T+RVW CY L GH V +++ ++S+S D T ++W
Sbjct: 482 DHTVRVWHVDSRTCY-----TLRGHTDWVN----HVKIHSA--SNTIFSASDDTTIRMW 529
Score = 76 (31.8 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 27/90 (30%), Positives = 38/90 (42%)
Query: 172 TMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVL 231
T T ++ A +S+ +FL S + D +I W D +G F GH V
Sbjct: 619 TFTPSNNNTATTATTPNSY-PTHFLTS-ALDNTIKLW--DVATGKCIRTQF--GHIEGVW 672
Query: 232 CLVAIEKLIFSGSEDTTIRVWRRAEGGCYH 261
+ A I SG+ D I+VW G C H
Sbjct: 673 SIAADTFRIISGAHDRLIKVWDLQNGKCLH 702
Score = 73 (30.8 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 16/57 (28%), Positives = 30/57 (52%)
Query: 2 VFTGSSSTRIRVWR--QPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNF 56
+ TGS T I++W+ +CV+ + VRA++ + L + D I++WN+
Sbjct: 396 LMTGSYDTTIKIWKIDSGECVKT--LTGHTKGVRALVFDNQKLISGGLDSTIKVWNY 450
Score = 58 (25.5 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 14/52 (26%), Positives = 25/52 (48%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESN 135
T + H D V+ + + A +++ S D T++ W + C V F E+N
Sbjct: 497 TLRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNSNECIKV--FGGMENN 546
Score = 40 (19.1 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 294 SSSLDQTFKVWRV 306
+S+LD T K+W V
Sbjct: 643 TSALDNTIKLWDV 655
>POMBASE|SPCC126.01c [details] [associations]
symbol:SPCC126.01c "conserved fungal protein"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPCC126.01c GO:GO:0005829 GO:GO:0005634
GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 PIR:T40905 RefSeq:NP_588444.2
ProteinModelPortal:O94394 EnsemblFungi:SPCC126.01c.1 GeneID:2538691
KEGG:spo:SPCC126.01c OMA:WTASADK OrthoDB:EOG4BK8CJ NextBio:20799877
Uniprot:O94394
Length = 369
Score = 157 (60.3 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 58/230 (25%), Positives = 93/230 (40%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H D V C+ EGLL +GS D ++ W V + + H + I +
Sbjct: 131 HTDYVKCLLLLEEEGLLLSGSTDASLIVWDVSSQPSRLLYKLTGHSRGIECITRQPNTDI 190
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+TC S+ S++ W S QS+V L D+ L++ S+D ++
Sbjct: 191 FWTCGSESSIRCWHITKVGGSQLEEEGFWGHQSNVYCLLFDPQ-DSEALWTASADKTVRE 249
Query: 208 WEKDKMSGGFNHGGFLQGH---CFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECL 264
W + G + ++ H C VL L + I + D IRVW G
Sbjct: 250 WS---LYQGIHEETRME-HPDVCTDVLTLA--DGNIATACRDEEIRVWDTTTGN------ 297
Query: 265 AVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQEK 314
V D + G + L+ + +L+ SSSLDQT +VW ++ D +
Sbjct: 298 -VKDIYSGHYESVTKILQWKS----YLI-SSSLDQTIRVWDLEYSADNNE 341
Score = 151 (58.2 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 44/163 (26%), Positives = 76/163 (46%)
Query: 104 LYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRV 163
+YTGS+D T+K W V C V++ + H V +++ +++G + + S+D S+ +W V
Sbjct: 105 IYTGSWDHTIKKWNVSTGEC--VETLIGHTDYVKCLLLLEEEGLLLSGSTDASLIVWD-V 161
Query: 164 YRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGG-FNHGGF 222
+ S L L + + D + ++ S+ SI W K+ G GF
Sbjct: 162 SSQPSRLL-YKLTGHSRGIECITRQPNTDIF--WTCGSESSIRCWHITKVGGSQLEEEGF 218
Query: 223 LQGHCFAVLCLV---AIEKLIFSGSEDTTIRVWRRAEGGCYHE 262
GH V CL+ + +++ S D T+R W +G HE
Sbjct: 219 W-GHQSNVYCLLFDPQDSEALWTASADKTVREWSLYQG--IHE 258
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 156 (60.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 56/224 (25%), Positives = 96/224 (42%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQ 143
T + H++ V ++F L+ +GSFD+ V+ W V CT + S AH V + N+
Sbjct: 125 TLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMIS--AHSDPVTGVHFNR 182
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
D V + S DG+V+IW + +T++ V+ + S + F+ +G+ D
Sbjct: 183 DGTLVVSGSYDGTVRIWDTTTGQLLNTISTE---DGKEVSFVKFSP--NGKFVLAGTLDN 237
Query: 204 SINFWE--KDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYH 261
++ W +K G + +C V K I +GSED I ++
Sbjct: 238 TLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQT----R 293
Query: 262 ECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWR 305
E + L GH V +A + G L D++ K+W+
Sbjct: 294 EIVQTLAGHEDVVLTVACHPTENIIASGAL----EKDRSVKIWK 333
Score = 143 (55.4 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 50/225 (22%), Positives = 93/225 (41%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQ 143
T + H++ +S +A+ L+ + S DKT+K W V + V + H+ V + N
Sbjct: 83 TLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKM--VKTLKGHKEYVFGVSFNP 140
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
+ + S D +V+IW N+ T + V + + D + SGS DG
Sbjct: 141 QSNLIVSGSFDENVRIWD----VNTGECTKMISAHSDPVTGVHFNR--DGTLVVSGSYDG 194
Query: 204 SINFWEKDKMSGGF-NHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHE 262
++ W D +G N G + + K + +G+ D T+R+W +
Sbjct: 195 TVRIW--DTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNN---KK 249
Query: 263 CLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
CL GH+ C+ ++ V G + + S D ++ ++
Sbjct: 250 CLKTYTGHKNEKYCIFSTFS---VTCGKWIVTGSEDNLIYIYNLQ 291
Score = 123 (48.4 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 45/177 (25%), Positives = 75/177 (42%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQ 143
T + H +S + F L + S DKT+K W D + + H+ ++ I +Q
Sbjct: 41 TLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFE--RTLEGHKEGISDIAWSQ 98
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
D + + S D ++KIW S + TLK + V ++ + + + SGS D
Sbjct: 99 DSKLICSASDDKTIKIWD----VESGKMVKTLKGHKEYVFGVSFNP--QSNLIVSGSFDE 152
Query: 204 SINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK---LIFSGSEDTTIRVWRRAEG 257
++ W D +G + H V V + L+ SGS D T+R+W G
Sbjct: 153 NVRIW--DVNTGECTK--MISAHSDPVTG-VHFNRDGTLVVSGSYDGTVRIWDTTTG 204
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 160 (61.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 50/190 (26%), Positives = 86/190 (45%)
Query: 88 HRDCVSCMAFYHAEG-LLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDG 146
H VS + A G LL TG D V W + + C+ S H S V ++ +N +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSI--NKPNCIMSLTGHTSPVESVRLNTPEE 76
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
+ S GS+++W + + TL ++++ +L + + F+ SGS D +I
Sbjct: 77 LIVAGSQSGSIRVWDL----EAAKILRTLMGHKANICSLDFHPYGE--FVASGSQDTNIK 130
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KLIFSGSEDTTIRVWRRAEGGCYHECL 264
W+ + F + +GH AV CL K + S ++D T+++W G + +
Sbjct: 131 LWDIRRKGCVFRY----RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAG----KMM 182
Query: 265 AVLDGHRGPV 274
+ GH GPV
Sbjct: 183 SEFPGHTGPV 192
Score = 125 (49.1 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 47/167 (28%), Positives = 72/167 (43%)
Query: 118 VLDKRCTCVDSFVAHESNVNAIVVNQDDG-FVFTCSSDGSVKIWRRVYRENSHTLTMTLK 176
V+ K + VAH SNV+++V+ + G + T D V +W N M+L
Sbjct: 5 VVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSI----NKPNCIMSLT 60
Query: 177 FQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAI 236
S V ++ L++ + +GS GSI W+ + L GH A +C +
Sbjct: 61 GHTSPVESVRLNT--PEELIVAGSQSGSIRVWDLEAAKILRT----LMGHK-ANICSLDF 113
Query: 237 E---KLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAAS 280
+ + SGS+DT I++W GC GH VRCL S
Sbjct: 114 HPYGEFVASGSQDTNIKLWDIRRKGCVFR----YRGHSQAVRCLRFS 156
>GENEDB_PFALCIPARUM|PFC0100c [details] [associations]
symbol:PFC0100c "regulatory protein, putative"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 160 (61.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 50/193 (25%), Positives = 82/193 (42%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V+C+ + TGS D+ +K W + C + H +++ I +++ + +
Sbjct: 285 HSGWVNCVDVDISNEWFATGSNDRLIKIWDLAS--CKLKLTLTGHINSIRDIKISKKNPY 342
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+F+C D VK W Y + + S V L+L D L SG D +
Sbjct: 343 LFSCGEDNRVKCWDLEYNK----VIRDYHGHLSGVYCLSLHPSLD--LLMSGGRDAVVRV 396
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVL--CLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLA 265
W+ S F L GH V+ C ++E + SGS+D IR+W G +C
Sbjct: 397 WDIRTKSSVF----VLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNG----KCRI 448
Query: 266 VLDGHRGPVRCLA 278
L H+ +R L+
Sbjct: 449 SLTHHKKSIRSLS 461
Score = 119 (46.9 bits), Expect = 0.00047, P = 0.00047
Identities = 44/162 (27%), Positives = 71/162 (43%)
Query: 130 VAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSS 189
+ H VN + V+ + + T S+D +KIW S L +TL +S+ + +S
Sbjct: 283 LGHSGWVNCVDVDISNEWFATGSNDRLIKIWDLA----SCKLKLTLTGHINSIRDIKISK 338
Query: 190 FFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQG-HCFAVLCLVAIEKLIFSGSEDTT 248
N +L+S D + W+ + ++ G L G +C L L L+ SG D
Sbjct: 339 --KNPYLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYC---LSLHPSLDLLMSGGRDAV 393
Query: 249 IRVWR-RAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMG 289
+RVW R + + VL GH G V + + +VV G
Sbjct: 394 VRVWDIRTKSSVF-----VLSGHTGTVMSICSQSVEPQVVSG 430
>UNIPROTKB|O97334 [details] [associations]
symbol:PFC0100c "Regulatory protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 160 (61.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 50/193 (25%), Positives = 82/193 (42%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V+C+ + TGS D+ +K W + C + H +++ I +++ + +
Sbjct: 285 HSGWVNCVDVDISNEWFATGSNDRLIKIWDLAS--CKLKLTLTGHINSIRDIKISKKNPY 342
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+F+C D VK W Y + + S V L+L D L SG D +
Sbjct: 343 LFSCGEDNRVKCWDLEYNK----VIRDYHGHLSGVYCLSLHPSLD--LLMSGGRDAVVRV 396
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVL--CLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLA 265
W+ S F L GH V+ C ++E + SGS+D IR+W G +C
Sbjct: 397 WDIRTKSSVF----VLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNG----KCRI 448
Query: 266 VLDGHRGPVRCLA 278
L H+ +R L+
Sbjct: 449 SLTHHKKSIRSLS 461
Score = 119 (46.9 bits), Expect = 0.00047, P = 0.00047
Identities = 44/162 (27%), Positives = 71/162 (43%)
Query: 130 VAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSS 189
+ H VN + V+ + + T S+D +KIW S L +TL +S+ + +S
Sbjct: 283 LGHSGWVNCVDVDISNEWFATGSNDRLIKIWDLA----SCKLKLTLTGHINSIRDIKISK 338
Query: 190 FFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQG-HCFAVLCLVAIEKLIFSGSEDTT 248
N +L+S D + W+ + ++ G L G +C L L L+ SG D
Sbjct: 339 --KNPYLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYC---LSLHPSLDLLMSGGRDAV 393
Query: 249 IRVWR-RAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMG 289
+RVW R + + VL GH G V + + +VV G
Sbjct: 394 VRVWDIRTKSSVF-----VLSGHTGTVMSICSQSVEPQVVSG 430
>WB|WBGene00004265 [details] [associations]
symbol:qui-1 species:6239 "Caenorhabditis elegans"
[GO:0050913 "sensory perception of bitter taste" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 HSSP:P16649
GO:GO:0050913 GeneTree:ENSGT00700000104282 EMBL:AL021487 PIR:T26919
RefSeq:NP_502613.2 ProteinModelPortal:O62471 SMR:O62471
STRING:O62471 PaxDb:O62471 EnsemblMetazoa:Y45F10B.10 GeneID:178326
KEGG:cel:CELE_Y45F10B.10 UCSC:Y45F10B.10 CTD:178326
WormBase:Y45F10B.10a HOGENOM:HOG000016418 InParanoid:O62471
OMA:MARDSEQ NextBio:900668 Uniprot:O62471
Length = 1592
Score = 165 (63.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 51/197 (25%), Positives = 85/197 (43%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQ 143
T + H V+C+ + L + SFDKTV W + + T S H + V ++
Sbjct: 906 TFKGHTAAVTCLCSSNDSSLFVSTSFDKTVNVW--VFSQSTPTMSLTHHTAKVTCAILTS 963
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
DD ++ T S+D S K+ + E + + SV +L L+S +N FL +GS D
Sbjct: 964 DDQYLITASADSSAKM---IKLETGEVMR-SFNDHTGSVVSLQLTS--NNQFLITGSGDF 1017
Query: 204 SINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHEC 263
+ W+ GG + + L + + + + ED T++V+ G HE
Sbjct: 1018 VVQMWDVTNGKCISRMGGLMAP--VSTLAITSNDAFVVVACEDETLKVFSTVGGQELHEL 1075
Query: 264 LAVLDGHRGPVRCLAAS 280
+ GH G V L +
Sbjct: 1076 M----GHEGKVNSLVCA 1088
>DICTYBASE|DDB_G0277143 [details] [associations]
symbol:gpbA "G protein b" species:44689
"Dictyostelium discoideum" [GO:0019933 "cAMP-mediated signaling"
evidence=IMP] [GO:0031982 "vesicle" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0032320 "positive regulation
of Ras GTPase activity" evidence=IMP] [GO:0008047 "enzyme activator
activity" evidence=TAS] [GO:0031682 "G-protein gamma-subunit
binding" evidence=IDA] [GO:0007188 "adenylate cyclase-modulating
G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030826 "regulation
of cGMP biosynthetic process" evidence=TAS] [GO:0007190 "activation
of adenylate cyclase activity" evidence=TAS] [GO:0046578
"regulation of Ras protein signal transduction" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IEA;IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043327 "chemotaxis to cAMP"
evidence=IMP] [GO:0043326 "chemotaxis to folate" evidence=IMP]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP;TAS] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0006935 "chemotaxis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0277143 InterPro:IPR001632
GO:GO:0045335 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0019933 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007190 GO:GO:0007188
GenomeReviews:CM000151_GR GO:GO:0043326 GO:GO:0004871
EMBL:AAFI02000019 GO:GO:0031152 PRINTS:PR00319 GO:GO:0005834
GO:GO:0043327 GO:GO:0030826 GO:GO:0032320 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X73641 PIR:A47370 RefSeq:XP_642759.1
ProteinModelPortal:P36408 SMR:P36408 IntAct:P36408 STRING:P36408
PRIDE:P36408 EnsemblProtists:DDB0252679 GeneID:8620948
KEGG:ddi:DDB_G0277143 OMA:YTHDNIL ProtClustDB:CLSZ2430844
GO:GO:0031682 Uniprot:P36408
Length = 347
Score = 138 (53.6 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 52/220 (23%), Positives = 88/220 (40%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H +SC F + ++ T S D T W V + T + F H +V ++ V+ D +
Sbjct: 149 HTGYLSCCRFLNDRQIV-TSSGDMTCILWDV--ENGTKITEFSDHNGDVMSVSVSPDKNY 205
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLY-SGSSDGSIN 206
+ + D + K+W S T ++ +NA+ +F N + +GS D S
Sbjct: 206 FISGACDATAKLWDL----RSGKCVQTFTGHEADINAV---QYFPNGLSFGTGSDDASCR 258
Query: 207 FWE--KDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECL 264
++ D+ + H L G + +F+G +D T VW +G E +
Sbjct: 259 LFDIRADRELMQYTHDNILCGITSVGFSFSG--RFLFAGYDDFTCNVWDTLKG----ERV 312
Query: 265 AVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
L GH V CL + G + + S D K+W
Sbjct: 313 LSLTGHGNRVSCLGVPTD------GMALCTGSWDSLLKIW 346
Score = 58 (25.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 37 AHDNM-LFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFL 77
A DN+ L + ++D K+ +W D T KV +P RSS++
Sbjct: 71 AEDNVHLVSASQDGKLLVW-----DGLTTNKVHAIPLRSSWV 107
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 160 (61.4 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 50/190 (26%), Positives = 86/190 (45%)
Query: 88 HRDCVSCMAFYHAEG-LLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDG 146
H VS + A G LL TG D V W + + C+ S H S V ++ +N +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSI--NKPNCIMSLTGHTSPVESVRLNTPEE 76
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
+ S GS+++W + + TL ++++ +L + + F+ SGS D +I
Sbjct: 77 LIVAGSQSGSIRVWDL----EAAKILRTLMGHKANICSLDFHPYGE--FVASGSQDTNIK 130
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KLIFSGSEDTTIRVWRRAEGGCYHECL 264
W+ + F + +GH AV CL K + S ++D T+++W G + +
Sbjct: 131 LWDIRRKGCVFRY----RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAG----KMM 182
Query: 265 AVLDGHRGPV 274
+ GH GPV
Sbjct: 183 SEFPGHTGPV 192
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 47/167 (28%), Positives = 72/167 (43%)
Query: 118 VLDKRCTCVDSFVAHESNVNAIVVNQDDG-FVFTCSSDGSVKIWRRVYRENSHTLTMTLK 176
V+ K + VAH SNV+++V+ + G + T D V +W N M+L
Sbjct: 5 VVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSI----NKPNCIMSLT 60
Query: 177 FQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAI 236
S V ++ L++ + +GS GSI W+ + L GH A +C +
Sbjct: 61 GHTSPVESVRLNT--PEELIVAGSQSGSIRVWDLEAAKILRT----LMGHK-ANICSLDF 113
Query: 237 E---KLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAAS 280
+ + SGS+DT I++W GC GH VRCL S
Sbjct: 114 HPYGEFVASGSQDTNIKLWDIRRKGCVFR----YRGHSQAVRCLRFS 156
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 160 (61.4 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 50/190 (26%), Positives = 86/190 (45%)
Query: 88 HRDCVSCMAFYHAEG-LLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDG 146
H VS + A G LL TG D V W + + C+ S H S V ++ +N +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSI--NKPNCIMSLTGHTSPVESVRLNTPEE 76
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
+ S GS+++W + + TL ++++ +L + + F+ SGS D +I
Sbjct: 77 LIVAGSQSGSIRVWDL----EAAKILRTLMGHKANICSLDFHPYGE--FVASGSQDTNIK 130
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KLIFSGSEDTTIRVWRRAEGGCYHECL 264
W+ + F + +GH AV CL K + S ++D T+++W G + +
Sbjct: 131 LWDIRRKGCVFRY----RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAG----KMM 182
Query: 265 AVLDGHRGPV 274
+ GH GPV
Sbjct: 183 SEFPGHTGPV 192
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 47/167 (28%), Positives = 72/167 (43%)
Query: 118 VLDKRCTCVDSFVAHESNVNAIVVNQDDG-FVFTCSSDGSVKIWRRVYRENSHTLTMTLK 176
V+ K + VAH SNV+++V+ + G + T D V +W N M+L
Sbjct: 5 VVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSI----NKPNCIMSLT 60
Query: 177 FQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAI 236
S V ++ L++ + +GS GSI W+ + L GH A +C +
Sbjct: 61 GHTSPVESVRLNT--PEELIVAGSQSGSIRVWDLEAAKILRT----LMGHK-ANICSLDF 113
Query: 237 E---KLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAAS 280
+ + SGS+DT I++W GC GH VRCL S
Sbjct: 114 HPYGEFVASGSQDTNIKLWDIRRKGCVFR----YRGHSQAVRCLRFS 156
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 160 (61.4 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 50/190 (26%), Positives = 86/190 (45%)
Query: 88 HRDCVSCMAFYHAEG-LLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDG 146
H VS + A G LL TG D V W + + C+ S H S V ++ +N +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSI--NKPNCIMSLTGHTSPVESVRLNTPEE 76
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
+ S GS+++W + + TL ++++ +L + + F+ SGS D +I
Sbjct: 77 LIVAGSQSGSIRVWDL----EAAKILRTLMGHKANICSLDFHPYGE--FVASGSQDTNIK 130
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KLIFSGSEDTTIRVWRRAEGGCYHECL 264
W+ + F + +GH AV CL K + S ++D T+++W G + +
Sbjct: 131 LWDIRRKGCVFRY----RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAG----KMM 182
Query: 265 AVLDGHRGPV 274
+ GH GPV
Sbjct: 183 SEFPGHTGPV 192
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 47/167 (28%), Positives = 72/167 (43%)
Query: 118 VLDKRCTCVDSFVAHESNVNAIVVNQDDG-FVFTCSSDGSVKIWRRVYRENSHTLTMTLK 176
V+ K + VAH SNV+++V+ + G + T D V +W N M+L
Sbjct: 5 VVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSI----NKPNCIMSLT 60
Query: 177 FQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAI 236
S V ++ L++ + +GS GSI W+ + L GH A +C +
Sbjct: 61 GHTSPVESVRLNT--PEELIVAGSQSGSIRVWDLEAAKILRT----LMGHK-ANICSLDF 113
Query: 237 E---KLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAAS 280
+ + SGS+DT I++W GC GH VRCL S
Sbjct: 114 HPYGEFVASGSQDTNIKLWDIRRKGCVFR----YRGHSQAVRCLRFS 156
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 160 (61.4 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 50/190 (26%), Positives = 86/190 (45%)
Query: 88 HRDCVSCMAFYHAEG-LLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDG 146
H VS + A G LL TG D V W + + C+ S H S V ++ +N +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSI--NKPNCIMSLTGHTSPVESVRLNTPEE 76
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
+ S GS+++W + + TL ++++ +L + + F+ SGS D +I
Sbjct: 77 LIVAGSQSGSIRVWDL----EAAKILRTLMGHKANICSLDFHPYGE--FVASGSQDTNIK 130
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KLIFSGSEDTTIRVWRRAEGGCYHECL 264
W+ + F + +GH AV CL K + S ++D T+++W G + +
Sbjct: 131 LWDIRRKGCVFRY----RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAG----KMM 182
Query: 265 AVLDGHRGPV 274
+ GH GPV
Sbjct: 183 SEFPGHTGPV 192
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 47/167 (28%), Positives = 72/167 (43%)
Query: 118 VLDKRCTCVDSFVAHESNVNAIVVNQDDG-FVFTCSSDGSVKIWRRVYRENSHTLTMTLK 176
V+ K + VAH SNV+++V+ + G + T D V +W N M+L
Sbjct: 5 VVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSI----NKPNCIMSLT 60
Query: 177 FQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAI 236
S V ++ L++ + +GS GSI W+ + L GH A +C +
Sbjct: 61 GHTSPVESVRLNT--PEELIVAGSQSGSIRVWDLEAAKILRT----LMGHK-ANICSLDF 113
Query: 237 E---KLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAAS 280
+ + SGS+DT I++W GC GH VRCL S
Sbjct: 114 HPYGEFVASGSQDTNIKLWDIRRKGCVFR----YRGHSQAVRCLRFS 156
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 160 (61.4 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 50/190 (26%), Positives = 86/190 (45%)
Query: 88 HRDCVSCMAFYHAEG-LLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDG 146
H VS + A G LL TG D V W + + C+ S H S V ++ +N +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSI--NKPNCIMSLTGHTSPVESVRLNTPEE 76
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
+ S GS+++W + + TL ++++ +L + + F+ SGS D +I
Sbjct: 77 LIVAGSQSGSIRVWDL----EAAKILRTLMGHKANICSLDFHPYGE--FVASGSQDTNIK 130
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KLIFSGSEDTTIRVWRRAEGGCYHECL 264
W+ + F + +GH AV CL K + S ++D T+++W G + +
Sbjct: 131 LWDIRRKGCVFRY----RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAG----KMM 182
Query: 265 AVLDGHRGPV 274
+ GH GPV
Sbjct: 183 SEFPGHTGPV 192
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 47/167 (28%), Positives = 72/167 (43%)
Query: 118 VLDKRCTCVDSFVAHESNVNAIVVNQDDG-FVFTCSSDGSVKIWRRVYRENSHTLTMTLK 176
V+ K + VAH SNV+++V+ + G + T D V +W N M+L
Sbjct: 5 VVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSI----NKPNCIMSLT 60
Query: 177 FQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAI 236
S V ++ L++ + +GS GSI W+ + L GH A +C +
Sbjct: 61 GHTSPVESVRLNT--PEELIVAGSQSGSIRVWDLEAAKILRT----LMGHK-ANICSLDF 113
Query: 237 E---KLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAAS 280
+ + SGS+DT I++W GC GH VRCL S
Sbjct: 114 HPYGEFVASGSQDTNIKLWDIRRKGCVFR----YRGHSQAVRCLRFS 156
>TAIR|locus:2131799 [details] [associations]
symbol:ZFWD1 "zinc finger WD40 repeat protein 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR000571
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00642
PROSITE:PS50082 PROSITE:PS50103 PROSITE:PS50294 SMART:SM00320
SMART:SM00356 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AL079350
EMBL:AJ252063 EMBL:BT026122 IPI:IPI00530759 RefSeq:NP_194274.2
UniGene:At.32255 ProteinModelPortal:Q9FNZ2 SMR:Q9FNZ2 IntAct:Q9FNZ2
STRING:Q9FNZ2 PRIDE:Q9FNZ2 EnsemblPlants:AT4G25440.1 GeneID:828649
KEGG:ath:AT4G25440 GeneFarm:3766 TAIR:At4g25440
HOGENOM:HOG000239729 InParanoid:Q9FNZ2 OMA:WNTQTNT PhylomeDB:Q9FNZ2
ProtClustDB:CLSN2687444 Genevestigator:Q9FNZ2 Uniprot:Q9FNZ2
Length = 430
Score = 157 (60.3 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 61/227 (26%), Positives = 95/227 (41%)
Query: 78 SFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVN 137
SFS H+ V+ +A LYT S D+TV+ W +CT V + V
Sbjct: 133 SFSLLTQLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLNL---GGEVG 189
Query: 138 AIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLY 197
I+ +G VK W +N+ L++ Q V +L + + D L+
Sbjct: 190 CII---SEGPWLLVGMPNLVKAWNI---QNNADLSLNGPVGQ--VYSLVVGT--D--LLF 237
Query: 198 SGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEG 257
+G+ DGSI W + + F+ L GH AV+ L ++SG+ D +I+VW
Sbjct: 238 AGTQDGSILVWRYNSTTSCFDPAASLLGHTLAVVSLYVGANRLYSGAMDNSIKVWSLDN- 296
Query: 258 GCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
+C+ L H S+ M + + S SLD T K+W
Sbjct: 297 ---LQCIQTLTEH--------TSVVMSLICWDQFLLSCSLDNTVKIW 332
Score = 126 (49.4 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 41/146 (28%), Positives = 63/146 (43%)
Query: 113 VKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLT 172
VKAW + + ++ V V ++VV D +F + DGS+ +WR Y NS T
Sbjct: 206 VKAWNIQNNADLSLNGPVGQ---VYSLVVGTD--LLFAGTQDGSILVWR--Y--NSTTSC 256
Query: 173 MTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLC 232
+S + LYSG+ D SI W D + L H V+
Sbjct: 257 FDPAASLLGHTLAVVSLYVGANRLYSGAMDNSIKVWSLDNLQCIQT----LTEHTSVVMS 312
Query: 233 LVAIEKLIFSGSEDTTIRVWRRAEGG 258
L+ ++ + S S D T+++W EGG
Sbjct: 313 LICWDQFLLSCSLDNTVKIWAATEGG 338
Score = 45 (20.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 34 AILAHDNMLFTTNKDCKIRIWN 55
A+ + + L+T +KD +RIW+
Sbjct: 151 ALPSGSDKLYTASKDETVRIWD 172
Score = 43 (20.2 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 14/57 (24%), Positives = 24/57 (42%)
Query: 2 VFTGSSSTRIRVWRQPDCVE---RGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWN 55
++T S +R+W DC G + GEV I++ L + ++ WN
Sbjct: 159 LYTASKDETVRIW---DCASGQCTGVLNLG-GEVGCIISEGPWLLVGMPNL-VKAWN 210
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 148 (57.2 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 67/249 (26%), Positives = 99/249 (39%)
Query: 76 FLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESN 135
F F T H VS +A + + S DKT+K W V C V +F H
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYC--VKTFTGHREW 236
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYRENSHTLTMTLKFQQSSVNALALS 188
V + NQD + + S+D +V++W + RE+ H + + + S + L
Sbjct: 237 VRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVEC-ISWAPESAHPTILE 295
Query: 189 SFFDNY--------FLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--K 238
+ FL SGS D +I W+ +S G L GH V ++ K
Sbjct: 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWD---VSIGMCLMT-LVGHDNWVRGVLVHPGGK 351
Query: 239 LIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLD 298
I S ++D T+R+W C L H V SL+ K V + S+D
Sbjct: 352 YIVSCADDKTLRIWDYKN----KRCTKTLSAHEHFV----TSLDFHKTAP--YVVTGSVD 401
Query: 299 QTFKVWRVK 307
QT KVW +
Sbjct: 402 QTVKVWECR 410
Score = 124 (48.7 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 59/234 (25%), Positives = 98/234 (41%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVD-SFVAHESNVNAIVVNQDDG 146
HR V+ + F+ ++ + S D T+K W D + + H +V I +
Sbjct: 107 HRSPVTRVIFHPVFSVIVSASEDATIKVW---DHETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
+ +CS+D ++K+W T+ +V+++A+ D+ + S S D +I
Sbjct: 164 LLASCSADMTIKLWDF----QGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIK 217
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK--LIFSGSEDTTIRVWRRAEGGCY---- 260
WE ++ G+ F GH V + + LI S S D T+RVW A C
Sbjct: 218 MWE---VATGYCVKTFT-GHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELR 273
Query: 261 ---H--ECLAVLDGHRGPVRCLAASLEMEKVVM-GFLVYSSSLDQTFKVWRVKV 308
H EC++ P A E +K G + S S D+T K+W V +
Sbjct: 274 EHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSI 327
Score = 49 (22.3 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 17/67 (25%), Positives = 30/67 (44%)
Query: 1 MVFTGSSSTRIRVW-RQPDCVERGFIKARHGEVRAI-LAHDNMLFTT-NKDCKIRIWNFT 57
++ + S I+VW + ER +K V+ I H L + + D I++W+F
Sbjct: 122 VIVSASEDATIKVWDHETGDFERT-LKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQ 180
Query: 58 VSDNFRT 64
+ RT
Sbjct: 181 GFECIRT 187
Score = 47 (21.6 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 10/48 (20%), Positives = 23/48 (47%)
Query: 21 ERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKK 66
E+ + V ++ H +++ + ++D I++W+ D RT K
Sbjct: 100 EKYALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLK 147
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 154 (59.3 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 55/181 (30%), Positives = 85/181 (46%)
Query: 131 AHESNVNAIVVNQDDGFVFTCSS-DGSVKIWRRVYRENSHTLTMTLKFQQSS-VNALALS 188
AH V AI D+ V SS D S+ +W+ + S+ + S V + LS
Sbjct: 13 AHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLS 72
Query: 189 SFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLV--AIEKLIFSGSED 246
S D F SGS DG + W+ ++ G + F+ GH VL + + I S S D
Sbjct: 73 S--DGQFALSGSWDGELRLWD---LATGESTRRFV-GHTKDVLSVAFSTDNRQIVSASRD 126
Query: 247 TTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRV 306
TI++W G C + ++ DGH+ V C+ S ++ +V S+S D+T KVW +
Sbjct: 127 RTIKLWNTL-GECKYT-ISEADGHKEWVSCVRFS---PNTLVPTIV-SASWDKTVKVWNL 180
Query: 307 K 307
+
Sbjct: 181 Q 181
Score = 116 (45.9 bits), Expect = 0.00038, P = 0.00038
Identities = 57/230 (24%), Positives = 92/230 (40%)
Query: 84 TQQQHRDCVSCMAF-YHAEGLLYTGSFDKTVKAWRVL--DKRCTCVDS-FVAHESNVNAI 139
T H D V+ +A ++ T S DK++ W++ DK H V +
Sbjct: 10 TMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDV 69
Query: 140 VVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSG 199
V++ D F + S DG +++W E+ T +F + + L+++ DN + S
Sbjct: 70 VLSSDGQFALSGSWDGELRLWDLATGES------TRRFVGHTKDVLSVAFSTDNRQIVSA 123
Query: 200 SSDGSINFWE-----KDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRR 254
S D +I W K +S H ++ F+ LV I S S D T++VW
Sbjct: 124 SRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPT---IVSASWDKTVKVWNL 180
Query: 255 AEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
C + L GH G + +A S + G L S D +W
Sbjct: 181 QN--C--KLRNTLAGHSGYLNTVAVSPD------GSLCASGGKDGVILLW 220
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 136 (52.9 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 42/151 (27%), Positives = 71/151 (47%)
Query: 106 TGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVY- 164
+G+ D ++K W V D C +F+ HES++NA+ + G+ FT SD + R++
Sbjct: 157 SGACDASIKLWDVRDSMCR--QTFIGHESDINAVAFFPN-GYAFTTGSDDATC---RLFD 210
Query: 165 -RENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFL 223
R + L + + ++A S L +G D + N W D M G + G L
Sbjct: 211 LRADQELLMYSHDNIICGITSVAFSR--SGRLLLAGYDDFNCNIW--DAMKG--DRAGVL 264
Query: 224 QGHCFAVLCLVAIEK--LIFSGSEDTTIRVW 252
GH V CL + + +GS D+ +++W
Sbjct: 265 AGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 295
Score = 110 (43.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 44/180 (24%), Positives = 76/180 (42%)
Query: 129 FVAHESNVNAIVVNQDDGFVFTCSS-DGSVKIWRRVYRENSHTLTMTLKFQQSSVNALAL 187
F H +V ++ + DG F + D S+K+W R++ T +S +NA+A
Sbjct: 136 FAGHSGDVMSLSL-APDGRTFVSGACDASIKLWD--VRDSM--CRQTFIGHESDINAVA- 189
Query: 188 SSFFDN-YFLYSGSSDGSINFWE--KDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGS 244
FF N Y +GS D + ++ D+ ++H + G + +L+ +G
Sbjct: 190 --FFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICG--ITSVAFSRSGRLLLAGY 245
Query: 245 EDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
+D +W +G + VL GH V CL + + G V + S D K+W
Sbjct: 246 DDFNCNIWDAMKG----DRAGVLAGHDNRVSCLGVTDD------GMAVATGSWDSFLKIW 295
Score = 56 (24.8 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 41 MLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFL 77
+L + ++D K+ IW D++ T KV +P RSS++
Sbjct: 25 LLVSASQDGKLIIW-----DSYTTNKVHAIPLRSSWV 56
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 157 (60.3 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 55/215 (25%), Positives = 86/215 (40%)
Query: 65 KKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCT 124
KK ++P+ + S H V C+A TG+ D+ +K W + +
Sbjct: 148 KKAPSIPKPKWHAPWKLSRVISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLK 207
Query: 125 CVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNA 184
S H S V + V+ ++F+C D VK W Y + + S+V +
Sbjct: 208 L--SLTGHVSTVRGVAVSTKHPYLFSCGEDRQVKCWDLEYNK----VIRHYHGHLSAVYS 261
Query: 185 LALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVA--IEKLIFS 242
LAL D L + D + W D + H L GH V +VA I +
Sbjct: 262 LALHPTID--VLATSGRDSTARIW--DMRTKANVHT--LTGHTNTVASVVAQATNPQIIT 315
Query: 243 GSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCL 277
GS D+T+R+W A G + + L H+ VR +
Sbjct: 316 GSHDSTVRLWDLAAG----KSVCTLTNHKKSVRSI 346
Score = 117 (46.2 bits), Expect = 0.00057, P = 0.00057
Identities = 50/219 (22%), Positives = 92/219 (42%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V +A + +L T D T + W + K V + H + V ++V +
Sbjct: 255 HLSAVYSLALHPTIDVLATSGRDSTARIWDMRTK--ANVHTLTGHTNTVASVVAQATNPQ 312
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ T S D +V++W ++ TLT K SV ++ L + ++++ +S +I
Sbjct: 313 IITGSHDSTVRLWDLAAGKSVCTLTNHKK----SVRSIVLHP---SLYMFASASPDNIKQ 365
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVA-IEKLIFSGSEDTTIRVWRRAEGGCYHECLAV 266
W + G F + GH V C+ A E ++ SG ++ T+ W G + A
Sbjct: 366 WRCPE--GKFVQN--ISGHTSIVNCMAANSEGVLVSGGDNGTMFFWDWRTGYNFQRFQAP 421
Query: 267 LDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWR 305
+ G + A M G + ++ D+T KV++
Sbjct: 422 VQP--GSMDSEAGIFAMCFDQSGSRLITAEADKTIKVYK 458
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 142 (55.0 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 51/170 (30%), Positives = 75/170 (44%)
Query: 87 QHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDG 146
+H V C F L+ + S DKT+K W +K+C V++F N + N
Sbjct: 142 RHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC--VNNFSDSVGFANFVDFNPSGT 199
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
+ + SD +VK+W R N L + VN ++ DNY L + SSDG++
Sbjct: 200 CIASAGSDQTVKVWD--VRVNK--LLQHYQVHSGGVNCISFHPS-DNY-LVTASSDGTLK 253
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK---LIFSGSEDTTIRVWR 253
D + G + LQGH V V+ K L SG DT + +WR
Sbjct: 254 IL--DLLEGRLIYT--LQGHTGPVFT-VSFSKGGELFASGGADTQVLLWR 298
Score = 128 (50.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 52/192 (27%), Positives = 79/192 (41%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H+D V+ + F LL + S D+TV+ W + DKR F AH + V ++ + D F
Sbjct: 59 HKDVVTSVQFSPHGNLLASASRDRTVRLW-IPDKRGK-FSEFKAHTAPVRSVDFSADGQF 116
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ T S D S+K+W +YR+ +L V S D + S S D +I
Sbjct: 117 LATASEDKSIKVWS-MYRQR---FLYSLYRHTHWVRCAKFSP--DGRLIVSCSEDKTIKI 170
Query: 208 WEKDKMSGGFNHGGFLQGHCFA-VLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAV 266
W+ N F FA + I S D T++VW ++ L
Sbjct: 171 WDTTNKQCVNN---FSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVR----VNKLLQH 223
Query: 267 LDGHRGPVRCLA 278
H G V C++
Sbjct: 224 YQVHSGGVNCIS 235
Score = 113 (44.8 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 49/211 (23%), Positives = 87/211 (41%)
Query: 98 YHAEG-LLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGS 156
+ A+G L T S DK++K W + +R + S H V + D + +CS D +
Sbjct: 110 FSADGQFLATASEDKSIKVWSMYRQRF--LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKT 167
Query: 157 VKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGG 216
+KIW ++ + + ++ F N + + + S SD ++ W+ +++
Sbjct: 168 IKIWDTTNKQCVNNFSDSVGF----ANFVDFNP--SGTCIASAGSDQTVKVWDV-RVNKL 220
Query: 217 FNHGGFLQGHCFAVLCLV--AIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPV 274
H Q H V C+ + + + S D T+++ EG + L GH GPV
Sbjct: 221 LQH---YQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEG----RLIYTLQGHTGPV 273
Query: 275 RCLAASLEMEKVVMGFLVYSSSLDQTFKVWR 305
++ S G L S D +WR
Sbjct: 274 FTVSFSKG------GELFASGGADTQVLLWR 298
Score = 56 (24.8 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 20/75 (26%), Positives = 32/75 (42%)
Query: 4 TGSSSTRIRVWR-QPDCVERGFIKARHGEVRAILA---HDNMLFTTNKDCKIRIWNFTVS 59
T S T + +W +P R + H +V + H N+L + ++D +R+W
Sbjct: 35 TASWDTFLMLWNFKPHA--RAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKR 92
Query: 60 DNFRTKKVTTLPRRS 74
F K T P RS
Sbjct: 93 GKFSEFKAHTAPVRS 107
Score = 54 (24.1 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 26/99 (26%), Positives = 48/99 (48%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERG-F--IKARHGEVRAI--LAHDNMLFTTNKDCKIRIWN 55
++ + S +R+W PD +RG F KA VR++ A L T ++D I++W+
Sbjct: 74 LLASASRDRTVRLWI-PD--KRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWS 130
Query: 56 FTVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSC 94
+R + + +L R + ++ +K + R VSC
Sbjct: 131 M-----YRQRFLYSLYRHTHWVRCAKFSPDG--RLIVSC 162
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 140 (54.3 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 48/171 (28%), Positives = 77/171 (45%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H+D V+C+ F + LL +GS DKTV+ W K + V F AH + V ++ D
Sbjct: 91 HKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTV--FRAHTATVRSVHFCSDGQS 148
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFF-DNYFLYSGSSDGSIN 206
T S D ++K+W ++H Q +N + + F D + S S D ++
Sbjct: 149 FVTASDDKTIKVW------STHRQKFLFSLSQH-INWVRCAKFSPDGRLIVSASDDKTVK 201
Query: 207 FWEKDK---MSGGFNHGGFLQGHCF--AVLCLVAIEKLIFSGSEDTTIRVW 252
W+K + HGGF+ F + C+ A +G D T++VW
Sbjct: 202 LWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAA------AGM-DNTVKVW 245
Score = 138 (53.6 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 60/200 (30%), Positives = 84/200 (42%)
Query: 57 TVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAW 116
T SD+ +T KV + R FL FS S QH + V C F L+ + S DKTVK W
Sbjct: 151 TASDD-KTIKVWST-HRQKFL-FSLS----QHINWVRCAKFSPDGRLIVSASDDKTVKLW 203
Query: 117 RVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLK 176
+ C V S+ H V + + V D +VK+W +H L +
Sbjct: 204 DKTSREC--VHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWD----VRTHRLLQHYQ 257
Query: 177 FQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAI 236
++VNAL+ NY L + SSD ++ D M G + L GH VA
Sbjct: 258 LHSAAVNALSFHPS-GNY-LVTASSDSTLKIL--DLMEGRLLYT--LHGHQ-GPATTVAF 310
Query: 237 EKL---IFSGSEDTTIRVWR 253
+ SG D + VW+
Sbjct: 311 SRTGEYFASGGSDEQVMVWK 330
Score = 56 (24.8 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 15/57 (26%), Positives = 26/57 (45%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAI-LAHDNMLFTTNKDCK-IRIWN 55
++ +GS +R+W E +A VR++ D F T D K I++W+
Sbjct: 106 LLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWS 162
>UNIPROTKB|P11017 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9913 "Bos taurus"
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC140489 EMBL:M16480 EMBL:M36431 EMBL:M16539
IPI:IPI00712819 PIR:A26617 RefSeq:NP_001091030.1 UniGene:Bt.2055
ProteinModelPortal:P11017 SMR:P11017 STRING:P11017 PRIDE:P11017
Ensembl:ENSBTAT00000008508 GeneID:281202 KEGG:bta:281202 CTD:2783
InParanoid:P11017 KO:K04537 OMA:WDIETSQ NextBio:20805258
Uniprot:P11017
Length = 340
Score = 136 (52.9 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 42/151 (27%), Positives = 71/151 (47%)
Query: 106 TGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVY- 164
+G+ D ++K W V D C +F+ HES++NA+ + G+ FT SD + R++
Sbjct: 201 SGACDASIKLWDVRDSMCR--QTFIGHESDINAVAFFPN-GYAFTTGSDDATC---RLFD 254
Query: 165 -RENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFL 223
R + L + + ++A S L +G D + N W D M G + G L
Sbjct: 255 LRADQELLMYSHDNIICGITSVAFSR--SGRLLLAGYDDFNCNIW--DAMKG--DRAGVL 308
Query: 224 QGHCFAVLCLVAIEK--LIFSGSEDTTIRVW 252
GH V CL + + +GS D+ +++W
Sbjct: 309 AGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 110 (43.8 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 44/180 (24%), Positives = 76/180 (42%)
Query: 129 FVAHESNVNAIVVNQDDGFVFTCSS-DGSVKIWRRVYRENSHTLTMTLKFQQSSVNALAL 187
F H +V ++ + DG F + D S+K+W R++ T +S +NA+A
Sbjct: 180 FAGHSGDVMSLSL-APDGRTFVSGACDASIKLWD--VRDSM--CRQTFIGHESDINAVA- 233
Query: 188 SSFFDN-YFLYSGSSDGSINFWE--KDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGS 244
FF N Y +GS D + ++ D+ ++H + G + +L+ +G
Sbjct: 234 --FFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICG--ITSVAFSRSGRLLLAGY 289
Query: 245 EDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
+D +W +G + VL GH V CL + + G V + S D K+W
Sbjct: 290 DDFNCNIWDAMKG----DRAGVLAGHDNRVSCLGVTDD------GMAVATGSWDSFLKIW 339
Score = 56 (24.8 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 41 MLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFL 77
+L + ++D K+ IW D++ T KV +P RSS++
Sbjct: 69 LLVSASQDGKLIIW-----DSYTTNKVHAIPLRSSWV 100
>UNIPROTKB|E2RD95 [details] [associations]
symbol:GNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537
EMBL:AAEX03004274 RefSeq:XP_536861.2 ProteinModelPortal:E2RD95
SMR:E2RD95 PRIDE:E2RD95 Ensembl:ENSCAFT00000038242 GeneID:479733
KEGG:cfa:479733 NextBio:20854866 Uniprot:E2RD95
Length = 340
Score = 136 (52.9 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 42/151 (27%), Positives = 71/151 (47%)
Query: 106 TGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVY- 164
+G+ D ++K W V D C +F+ HES++NA+ + G+ FT SD + R++
Sbjct: 201 SGACDASIKLWDVRDSMCR--QTFIGHESDINAVAFFPN-GYAFTTGSDDATC---RLFD 254
Query: 165 -RENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFL 223
R + L + + ++A S L +G D + N W D M G + G L
Sbjct: 255 LRADQELLMYSHDNIICGITSVAFSR--SGRLLLAGYDDFNCNIW--DAMKG--DRAGVL 308
Query: 224 QGHCFAVLCLVAIEK--LIFSGSEDTTIRVW 252
GH V CL + + +GS D+ +++W
Sbjct: 309 AGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 110 (43.8 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 44/180 (24%), Positives = 76/180 (42%)
Query: 129 FVAHESNVNAIVVNQDDGFVFTCSS-DGSVKIWRRVYRENSHTLTMTLKFQQSSVNALAL 187
F H +V ++ + DG F + D S+K+W R++ T +S +NA+A
Sbjct: 180 FAGHSGDVMSLSL-APDGRTFVSGACDASIKLWD--VRDSM--CRQTFIGHESDINAVA- 233
Query: 188 SSFFDN-YFLYSGSSDGSINFWE--KDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGS 244
FF N Y +GS D + ++ D+ ++H + G + +L+ +G
Sbjct: 234 --FFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICG--ITSVAFSRSGRLLLAGY 289
Query: 245 EDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
+D +W +G + VL GH V CL + + G V + S D K+W
Sbjct: 290 DDFNCNIWDAMKG----DRAGVLAGHDNRVSCLGVTDD------GMAVATGSWDSFLKIW 339
Score = 56 (24.8 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 41 MLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFL 77
+L + ++D K+ IW D++ T KV +P RSS++
Sbjct: 69 LLVSASQDGKLIIW-----DSYTTNKVHAIPLRSSWV 100
>UNIPROTKB|P62879 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0048471
Reactome:REACT_111102 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0006112 GO:GO:0004871 GO:GO:0007204
EMBL:AF053356 GO:GO:0071377 GO:GO:0005246 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 HPA:HPA040736 CTD:2783
KO:K04537 OMA:WDIETSQ EMBL:M16514 EMBL:M36429 EMBL:M16538
EMBL:AF501883 EMBL:BC010073 EMBL:BC012348 EMBL:BC068003
IPI:IPI00003348 PIR:B26617 RefSeq:NP_005264.2 UniGene:Hs.185172
ProteinModelPortal:P62879 SMR:P62879 IntAct:P62879
MINT:MINT-1139073 STRING:P62879 PhosphoSite:P62879 DMDM:51317304
OGP:P62879 REPRODUCTION-2DPAGE:P62879 PaxDb:P62879 PRIDE:P62879
DNASU:2783 Ensembl:ENST00000303210 Ensembl:ENST00000393924
Ensembl:ENST00000393926 GeneID:2783 KEGG:hsa:2783 UCSC:uc003uwb.3
GeneCards:GC07P100271 HGNC:HGNC:4398 HPA:CAB010032 MIM:139390
neXtProt:NX_P62879 PharmGKB:PA28778 InParanoid:P62879
PhylomeDB:P62879 GenomeRNAi:2783 NextBio:10963 ArrayExpress:P62879
Bgee:P62879 CleanEx:HS_GNB2 Genevestigator:P62879
GermOnline:ENSG00000172354 Uniprot:P62879
Length = 340
Score = 136 (52.9 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 42/151 (27%), Positives = 71/151 (47%)
Query: 106 TGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVY- 164
+G+ D ++K W V D C +F+ HES++NA+ + G+ FT SD + R++
Sbjct: 201 SGACDASIKLWDVRDSMCR--QTFIGHESDINAVAFFPN-GYAFTTGSDDATC---RLFD 254
Query: 165 -RENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFL 223
R + L + + ++A S L +G D + N W D M G + G L
Sbjct: 255 LRADQELLMYSHDNIICGITSVAFSR--SGRLLLAGYDDFNCNIW--DAMKG--DRAGVL 308
Query: 224 QGHCFAVLCLVAIEK--LIFSGSEDTTIRVW 252
GH V CL + + +GS D+ +++W
Sbjct: 309 AGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 110 (43.8 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 44/180 (24%), Positives = 76/180 (42%)
Query: 129 FVAHESNVNAIVVNQDDGFVFTCSS-DGSVKIWRRVYRENSHTLTMTLKFQQSSVNALAL 187
F H +V ++ + DG F + D S+K+W R++ T +S +NA+A
Sbjct: 180 FAGHSGDVMSLSL-APDGRTFVSGACDASIKLWD--VRDSM--CRQTFIGHESDINAVA- 233
Query: 188 SSFFDN-YFLYSGSSDGSINFWE--KDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGS 244
FF N Y +GS D + ++ D+ ++H + G + +L+ +G
Sbjct: 234 --FFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICG--ITSVAFSRSGRLLLAGY 289
Query: 245 EDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
+D +W +G + VL GH V CL + + G V + S D K+W
Sbjct: 290 DDFNCNIWDAMKG----DRAGVLAGHDNRVSCLGVTDD------GMAVATGSWDSFLKIW 339
Score = 56 (24.8 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 41 MLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFL 77
+L + ++D K+ IW D++ T KV +P RSS++
Sbjct: 69 LLVSASQDGKLIIW-----DSYTTNKVHAIPLRSSWV 100
>MGI|MGI:95784 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein),
beta 2" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISA] [GO:0006184 "GTP catabolic
process" evidence=ISA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044297 "cell body" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051020 "GTPase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:95784 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 EMBL:AF312033
GO:GO:0007204 GO:GO:0005246 PRINTS:PR00319 GO:GO:0005834
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537 EMBL:U34960
EMBL:AB045007 EMBL:BC029077 EMBL:BC059942 EMBL:BC062178 EMBL:U38505
IPI:IPI00162780 RefSeq:NP_034442.1 UniGene:Mm.30141
ProteinModelPortal:P62880 SMR:P62880 IntAct:P62880 STRING:P62880
PhosphoSite:P62880 REPRODUCTION-2DPAGE:IPI00162780 PaxDb:P62880
PRIDE:P62880 Ensembl:ENSMUST00000031726 Ensembl:ENSMUST00000150063
GeneID:14693 KEGG:mmu:14693 InParanoid:P62880 ChiTaRS:GNB2
NextBio:286635 Bgee:P62880 Genevestigator:P62880
GermOnline:ENSMUSG00000029713 Uniprot:P62880
Length = 340
Score = 136 (52.9 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 42/151 (27%), Positives = 71/151 (47%)
Query: 106 TGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVY- 164
+G+ D ++K W V D C +F+ HES++NA+ + G+ FT SD + R++
Sbjct: 201 SGACDASIKLWDVRDSMCR--QTFIGHESDINAVAFFPN-GYAFTTGSDDATC---RLFD 254
Query: 165 -RENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFL 223
R + L + + ++A S L +G D + N W D M G + G L
Sbjct: 255 LRADQELLMYSHDNIICGITSVAFSR--SGRLLLAGYDDFNCNIW--DAMKG--DRAGVL 308
Query: 224 QGHCFAVLCLVAIEK--LIFSGSEDTTIRVW 252
GH V CL + + +GS D+ +++W
Sbjct: 309 AGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 110 (43.8 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 44/180 (24%), Positives = 76/180 (42%)
Query: 129 FVAHESNVNAIVVNQDDGFVFTCSS-DGSVKIWRRVYRENSHTLTMTLKFQQSSVNALAL 187
F H +V ++ + DG F + D S+K+W R++ T +S +NA+A
Sbjct: 180 FAGHSGDVMSLSL-APDGRTFVSGACDASIKLWD--VRDSM--CRQTFIGHESDINAVA- 233
Query: 188 SSFFDN-YFLYSGSSDGSINFWE--KDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGS 244
FF N Y +GS D + ++ D+ ++H + G + +L+ +G
Sbjct: 234 --FFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICG--ITSVAFSRSGRLLLAGY 289
Query: 245 EDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
+D +W +G + VL GH V CL + + G V + S D K+W
Sbjct: 290 DDFNCNIWDAMKG----DRAGVLAGHDNRVSCLGVTDD------GMAVATGSWDSFLKIW 339
Score = 56 (24.8 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 41 MLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFL 77
+L + ++D K+ IW D++ T KV +P RSS++
Sbjct: 69 LLVSASQDGKLIIW-----DSYTTNKVHAIPLRSSWV 100
>RGD|69319 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein), beta
polypeptide 2" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005246 "calcium channel
regulator activity" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0044297 "cell body" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO;ISS] [GO:0051020
"GTPase binding" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:69319
GO:GO:0048471 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0044297 GO:GO:0005246
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2783 KO:K04537 OMA:WDIETSQ EMBL:U34959
EMBL:AF277892 EMBL:BC065579 IPI:IPI00212658 RefSeq:NP_112299.1
UniGene:Rn.1155 ProteinModelPortal:P54313 SMR:P54313 STRING:P54313
PhosphoSite:P54313 World-2DPAGE:0004:P54313 PRIDE:P54313
Ensembl:ENSRNOT00000001911 GeneID:81667 KEGG:rno:81667
UCSC:RGD:69319 InParanoid:P54313 NextBio:615252 ArrayExpress:P54313
Genevestigator:P54313 GermOnline:ENSRNOG00000001409 Uniprot:P54313
Length = 340
Score = 136 (52.9 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 42/151 (27%), Positives = 71/151 (47%)
Query: 106 TGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVY- 164
+G+ D ++K W V D C +F+ HES++NA+ + G+ FT SD + R++
Sbjct: 201 SGACDASIKLWDVRDSMCR--QTFIGHESDINAVAFFPN-GYAFTTGSDDATC---RLFD 254
Query: 165 -RENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFL 223
R + L + + ++A S L +G D + N W D M G + G L
Sbjct: 255 LRADQELLMYSHDNIICGITSVAFSR--SGRLLLAGYDDFNCNIW--DAMKG--DRAGVL 308
Query: 224 QGHCFAVLCLVAIEK--LIFSGSEDTTIRVW 252
GH V CL + + +GS D+ +++W
Sbjct: 309 AGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 110 (43.8 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 44/180 (24%), Positives = 76/180 (42%)
Query: 129 FVAHESNVNAIVVNQDDGFVFTCSS-DGSVKIWRRVYRENSHTLTMTLKFQQSSVNALAL 187
F H +V ++ + DG F + D S+K+W R++ T +S +NA+A
Sbjct: 180 FAGHSGDVMSLSL-APDGRTFVSGACDASIKLWD--VRDSM--CRQTFIGHESDINAVA- 233
Query: 188 SSFFDN-YFLYSGSSDGSINFWE--KDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGS 244
FF N Y +GS D + ++ D+ ++H + G + +L+ +G
Sbjct: 234 --FFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICG--ITSVAFSRSGRLLLAGY 289
Query: 245 EDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
+D +W +G + VL GH V CL + + G V + S D K+W
Sbjct: 290 DDFNCNIWDAMKG----DRAGVLAGHDNRVSCLGVTDD------GMAVATGSWDSFLKIW 339
Score = 56 (24.8 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 41 MLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFL 77
+L + ++D K+ IW D++ T KV +P RSS++
Sbjct: 69 LLVSASQDGKLIIW-----DSYTTNKVHAIPLRSSWV 100
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 145 (56.1 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 49/171 (28%), Positives = 78/171 (45%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H+D V+C+ F + LL +GS DKTV+ W K + V F AH + V ++ D
Sbjct: 60 HKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSDGQL 117
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFF-DNYFLYSGSSDGSIN 206
+ T S D +VK+W ++H Q +N + + F D + S S D ++
Sbjct: 118 LVTASDDKTVKVW------STHRQRFLFSLTQH-INWVRCAKFSPDGRLIVSASDDKTVK 170
Query: 207 FWEKDK---MSGGFNHGGFLQGHCF--AVLCLVAIEKLIFSGSEDTTIRVW 252
W+K + HGGF+ F + C+ A +G D T++VW
Sbjct: 171 LWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAA------AGM-DNTVKVW 214
Score = 136 (52.9 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 58/200 (29%), Positives = 84/200 (42%)
Query: 57 TVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAW 116
T SD+ +T KV + R FL FS + QH + V C F L+ + S DKTVK W
Sbjct: 120 TASDD-KTVKVWST-HRQRFL-FSLT----QHINWVRCAKFSPDGRLIVSASDDKTVKLW 172
Query: 117 RVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLK 176
+ C V S+ H V + + + D +VK+W +H L +
Sbjct: 173 DKTSREC--VHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDT----RTHRLVQHYQ 226
Query: 177 FQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAI 236
++VNAL+ NY L + SSD ++ D M G + L GH VA
Sbjct: 227 LHSAAVNALSFHPS-GNY-LITASSDSTLKIL--DLMEGRLLYT--LHGHQ-GPATTVAF 279
Query: 237 EKL---IFSGSEDTTIRVWR 253
+ SG D + VW+
Sbjct: 280 SRTGEYFASGGSDEQVMVWK 299
Score = 127 (49.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 49/201 (24%), Positives = 83/201 (41%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
HRD V+C+ F L +GS D T+ W + K + F H+ V + +
Sbjct: 18 HRDAVTCVDFSLNTKHLASGSMDSTLMIWHM--KPQSRAYRFTGHKDAVTCVNFSPSGHL 75
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ + S D +V+IW + S + ++V ++ S D L + S D ++
Sbjct: 76 LASGSRDKTVRIWVPNVKGES----TVFRAHTATVRSVHFCS--DGQLLVTASDDKTVKV 129
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KLIFSGSEDTTIRVWRRAEGGCYHE-C- 263
W + F+ L H V C +LI S S+D T+++W + C H C
Sbjct: 130 WSTHRQRFLFS----LTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE 185
Query: 264 ----LAVLDGHRGPVRCLAAS 280
+ +D H C+AA+
Sbjct: 186 HGGFVTYVDFHPSGT-CIAAA 205
Score = 55 (24.4 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 14/57 (24%), Positives = 26/57 (45%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAI-LAHDNMLFTTNKDCK-IRIWN 55
++ +GS +R+W E +A VR++ D L T D K +++W+
Sbjct: 75 LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWS 131
>WB|WBGene00011051 [details] [associations]
symbol:pfs-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0044428 "nuclear part" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0018996 eggNOG:COG2319 GO:GO:0040011
HSSP:P16649 GO:GO:0044428 GeneTree:ENSGT00540000070914 EMBL:Z83120
KO:K15542 RefSeq:NP_496985.1 ProteinModelPortal:Q9NAN8 SMR:Q9NAN8
PaxDb:Q9NAN8 EnsemblMetazoa:R06A4.9.1 EnsemblMetazoa:R06A4.9.2
GeneID:175092 KEGG:cel:CELE_R06A4.9 UCSC:R06A4.9.1 CTD:175092
WormBase:R06A4.9 InParanoid:Q9NAN8 OMA:LTKFIRT NextBio:886718
Uniprot:Q9NAN8
Length = 809
Score = 162 (62.1 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 60/224 (26%), Positives = 102/224 (45%)
Query: 42 LFTTNKDCKIRIWNFTVSD-NFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHA 100
+F+ +KD IR F +D F T R F +++ + H V C+ ++
Sbjct: 211 MFSAHKDEAIRGLAFAPTDVKFATASDDGTARVWDFARYTEERVLRGHGAEVRCIDWHPT 270
Query: 101 EGLLYTGSFD--KTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVK 158
+GL+ TGS D + VK W K +C+ + H+S+V A+ N++ ++ T D VK
Sbjct: 271 KGLIATGSRDTQQPVKIWD--PKSGSCLATLQEHKSSVMAVEFNKNGNWLLTGGRDHLVK 328
Query: 159 IWR-RVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGF 217
++ R+ +E T + + V +LA + F+ SG DGSI +W D G
Sbjct: 329 MYDIRMMKE-----MRTYRAHKKEVISLAWHPIHEGLFV-SGGGDGSIVYWMVD----GE 378
Query: 218 NHGGFLQ-GHCFAVLCLV--AIEKLIFSGSEDTTIRVWRRAEGG 258
G L+ H A+ + + ++ +GS D + W R G
Sbjct: 379 KEIGLLEHAHDQAIWSMKWHPLGHILATGSNDNNTKFWARNRPG 422
Score = 38 (18.4 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 9/40 (22%), Positives = 17/40 (42%)
Query: 17 PDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNF 56
PD + G + V + H + + T C+ R+W +
Sbjct: 50 PDVMGDGPGRRLRKNVANVRRHVDYVSTVLNHCENRLWQY 89
>FB|FBgn0030011 [details] [associations]
symbol:Gbeta5 "Gbeta5" species:7227 "Drosophila melanogaster"
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS;NAS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K04539 OMA:ATDGLHE EMBL:BT004841 RefSeq:NP_572452.1
UniGene:Dm.11050 SMR:Q9W3J1 IntAct:Q9W3J1 STRING:Q9W3J1
EnsemblMetazoa:FBtr0071189 GeneID:31744 KEGG:dme:Dmel_CG10763
UCSC:CG10763-RA CTD:31744 FlyBase:FBgn0030011 InParanoid:Q9W3J1
OrthoDB:EOG4TTF0F GenomeRNAi:31744 NextBio:775120 Uniprot:Q9W3J1
Length = 358
Score = 151 (58.2 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 72/278 (25%), Positives = 115/278 (41%)
Query: 43 FTTNKDCKIRI---W----NFTVSDNFRT-----KKVTTLPRRSSFLSFSKSNTQQQHRD 90
FTTNK+ + + W + S NF KVT P S +K T H
Sbjct: 100 FTTNKEHAVTMPTTWIMACAYAPSGNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTS 159
Query: 91 CVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAI-VVNQDDGFVF 149
+SC + +++ + TGS D T W V + + SF H +V AI + + G F
Sbjct: 160 YMSCCIYPNSDQQILTGSGDSTCALWDVESGQL--LQSFHGHSGDVMAIDLAPNETGNTF 217
Query: 150 TCSS-DGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFW 208
S D IW + H + + + QS VN++ D + +GS D S +
Sbjct: 218 VSGSCDRMAFIWDM---RSGHVV-QSFEGHQSDVNSVKFHPCGDA--IATGSDDSSCRLY 271
Query: 209 EK--DKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAV 266
+ D+ F + G +V V+ +L+F+G D T+ +W + E + +
Sbjct: 272 DMRADREVAVFAKESIIFG-VNSVDFSVS-GRLLFAGYNDYTVNLWDTLKS----ERVCL 325
Query: 267 LDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
L GH V C+ S + G + + S D T +VW
Sbjct: 326 LYGHENKVSCVQVSPD------GTALSTGSWDYTIRVW 357
>POMBASE|SPAC664.15 [details] [associations]
symbol:caf4 "CCR4-Not complex subunit Caf4/Mdv1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000002
"mitochondrial genome maintenance" evidence=ISO] [GO:0000266
"mitochondrial fission" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005741 "mitochondrial outer membrane"
evidence=ISO] [GO:0006354 "DNA-dependent transcription, elongation"
evidence=IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0030014 "CCR4-NOT complex"
evidence=ISO] [GO:0030015 "CCR4-NOT core complex" evidence=NAS]
[GO:0051020 "GTPase binding" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPAC664.15 EMBL:CU329670
GO:GO:0006355 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005741
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000002
GO:GO:0030015 OrthoDB:EOG469V30 GO:GO:0000266 GO:GO:0006354
GO:GO:0051020 OMA:CVQTLDV PIR:T50245 PIR:T50289
RefSeq:XP_001713057.1 ProteinModelPortal:Q9P7I3 STRING:Q9P7I3
EnsemblFungi:SPAC664.15.1 GeneID:3361526 KEGG:spo:SPAC664.15
NextBio:20811568 Uniprot:Q9P7I3
Length = 651
Score = 155 (59.6 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 56/227 (24%), Positives = 100/227 (44%)
Query: 4 TGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVS---- 59
T S+ ++VW V G +K V + D+ + T + D +R+WN
Sbjct: 349 TASTDKTVKVWDMAGVVYLGSLKGHSDYVSCLAIQDSFIATGSMDTTVRLWNLDNDVLHK 408
Query: 60 DNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVL 119
DN + + + P + + +N H V+ +A ++ +L TG+ DKTV+ W ++
Sbjct: 409 DNPVEESLNSPPDQPVD---NATNVLTSHTAPVTALAL-SSDDVLITGADDKTVRQWDIV 464
Query: 120 DKRCTCVDSFV---AHESNVNAIVVN---QDDGFV--FTC--------SSDGSVKIWRRV 163
RC FV H+++ + I+V+ + + F+ C + DG ++IW
Sbjct: 465 TGRCIQTLDFVWAETHDTSTSQILVSDTYKQEPFIRALDCLDAAVASGTVDGLIRIW--- 521
Query: 164 YRENSHTLTMTLKFQQSSVNALALSSF-FDNYFLYSGSSDGSINFWE 209
L + L + + +SS FD+ LYSGS D S+ W+
Sbjct: 522 ------DLRIGLPVRSFIGHTAPISSLQFDSNHLYSGSYDNSVRIWD 562
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 142 (55.0 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 49/171 (28%), Positives = 77/171 (45%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H+D V+C+ F + LL +GS DKTV+ W K + V F AH + V ++ D
Sbjct: 60 HKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSDGQS 117
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFF-DNYFLYSGSSDGSIN 206
T S D +VK+W ++H Q +N + + F D + S S D ++
Sbjct: 118 FVTASDDKTVKVW------STHRQKFLFSLSQH-INWVRCAKFSPDGRLIVSASDDKTVK 170
Query: 207 FWEKDK---MSGGFNHGGFLQGHCF--AVLCLVAIEKLIFSGSEDTTIRVW 252
W+K + HGGF+ F + C+ A +G D T++VW
Sbjct: 171 LWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAA------AGM-DNTVKVW 214
Score = 138 (53.6 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 59/200 (29%), Positives = 84/200 (42%)
Query: 57 TVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAW 116
T SD+ +T KV + R FL FS S QH + V C F L+ + S DKTVK W
Sbjct: 120 TASDD-KTVKVWST-HRQKFL-FSLS----QHINWVRCAKFSPDGRLIVSASDDKTVKLW 172
Query: 117 RVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLK 176
+ C V S+ H V + + + D +VK+W +H L +
Sbjct: 173 DKTSREC--VHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD----VRTHRLLQHYQ 226
Query: 177 FQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAI 236
++VNAL+ NY L + SSD ++ D M G + L GH VA
Sbjct: 227 LHSAAVNALSFHPS-GNY-LVTASSDSTLKIL--DLMEGRLLYT--LHGHQ-GPATTVAF 279
Query: 237 EKL---IFSGSEDTTIRVWR 253
+ SG D + VW+
Sbjct: 280 SRTGEYFASGGSDEQVMVWK 299
Score = 55 (24.4 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 14/57 (24%), Positives = 26/57 (45%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAI-LAHDNMLFTTNKDCK-IRIWN 55
++ +GS +R+W E +A VR++ D F T D K +++W+
Sbjct: 75 LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWS 131
>SGD|S000004951 [details] [associations]
symbol:LST8 "Protein required for the transport of Gap1p to
the cell surface" species:4932 "Saccharomyces cerevisiae"
[GO:0030950 "establishment or maintenance of actin cytoskeleton
polarity" evidence=IMP] [GO:0030295 "protein kinase activator
activity" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0031234 "extrinsic to
internal side of plasma membrane" evidence=IDA] [GO:0001558
"regulation of cell growth" evidence=IPI] [GO:0005774 "vacuolar
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IMP] [GO:0010008 "endosome membrane" evidence=IDA]
[GO:0000139 "Golgi membrane" evidence=IDA] [GO:0031505 "fungal-type
cell wall organization" evidence=IMP] [GO:0031929 "TOR signaling
cascade" evidence=IC;IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IMP] [GO:0031932
"TORC2 complex" evidence=IPI] [GO:0031931 "TORC1 complex"
evidence=IPI] [GO:0006810 "transport" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004951 GO:GO:0005774 GO:GO:0000139 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0001558
GO:GO:0031929 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BK006947 GO:GO:0030295 GO:GO:0010008
GO:GO:0031930 GO:GO:0031505 KO:K07034 GO:GO:0031931 GO:GO:0030950
RefSeq:NP_014399.3 GeneID:855736 KEGG:sce:YNR002C GO:GO:0031932
GO:GO:0031234 EMBL:X77114 RefSeq:NP_014392.3 GeneID:855726
KEGG:sce:YNL006W KO:K08266 GeneTree:ENSGT00390000014795
HOGENOM:HOG000208395 OMA:NNKGNCY EMBL:Z71282 PIR:S45461
ProteinModelPortal:P41318 SMR:P41318 DIP:DIP-5318N IntAct:P41318
MINT:MINT-562844 STRING:P41318 PaxDb:P41318 PeptideAtlas:P41318
EnsemblFungi:YNL006W CYGD:YNL006w OrthoDB:EOG4GF6PT NextBio:980099
Genevestigator:P41318 GermOnline:YNL006W Uniprot:P41318
Length = 303
Score = 149 (57.5 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 56/222 (25%), Positives = 100/222 (45%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
HR V+ ++F + T S D T+K W D R + H + VN +V++ + G
Sbjct: 74 HRGNVTSVSFQQDNRWMVTSSEDGTIKVW---DVRSPSIPRNYKHNAPVNEVVIHPNQGE 130
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ +C DG+++IW + +H LT +S+ +L+++S D L + ++ G+
Sbjct: 131 LISCDRDGNIRIWDLGENQCTHQLTPE---DDTSLQSLSMAS--DGSMLAAANTKGNCYV 185
Query: 208 WEKDKMSGGFNH----GGFLQGHCFAVLCLVAIE-KLIFSGSEDTTIRVWRRAEGGCYHE 262
WE + +H F + L++ + K + + S D T RVW + +
Sbjct: 186 WEMPNHTDA-SHLKPVTKFRAHSTYITRILLSSDVKHLATCSADHTARVWSIDDD---FK 241
Query: 263 CLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
LDGH+ V A S + +LV +SS D ++W
Sbjct: 242 LETTLDGHQRWVWDCAFSADS-----AYLVTASS-DHYVRLW 277
>UNIPROTKB|Q2KJJ5 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 EMBL:BC105313
IPI:IPI00711976 RefSeq:NP_001040084.2 UniGene:Bt.20483
ProteinModelPortal:Q2KJJ5 STRING:Q2KJJ5 PRIDE:Q2KJJ5 GeneID:618429
KEGG:bta:618429 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
InParanoid:Q2KJJ5 KO:K14555 OrthoDB:EOG42JNQR NextBio:20901180
Uniprot:Q2KJJ5
Length = 800
Score = 141 (54.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 53/204 (25%), Positives = 84/204 (41%)
Query: 11 IRVWR-----QPDCVERGFIKARH-GEVRAILAHDNMLFTTNKDCKIRIWNFTVSDNFRT 64
IRVWR + CV +G G + + L T ++DC +++W +
Sbjct: 400 IRVWRMNKSGEVACVAQGSGHTHSVGTICCSRLKETFLVTGSQDCTVKLWPLPEA---LL 456
Query: 65 KKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCT 124
K T FL TQ H ++ +A + LL TGS D+T K W + RC
Sbjct: 457 SKGTGHEGGPVFLQAQA--TQHCHDKDINSVAVAPNDKLLATGSQDRTAKLWAL--PRCQ 512
Query: 125 CVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNA 184
+ +F H + + + D + T S+DG++K+W + T + +SV
Sbjct: 513 LLGTFSGHRRGLWCVQFSPMDQVLATASADGTIKLWAL----QDFSCLKTFEGHDASVLK 568
Query: 185 LALSSFFDNYFLYSGSSDGSINFW 208
+A S L S SDG + W
Sbjct: 569 VAFVSRGTQ--LLSSGSDGLLKLW 590
Score = 137 (53.3 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 54/204 (26%), Positives = 92/204 (45%)
Query: 117 RVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLK 176
+V D + + H V A+ V + +C+ D S+++WR + +
Sbjct: 360 KVFDLQTSACQILHGHTDIVLALDVFRKGRLFASCAKDQSIRVWR-MNKSGEVACVAQGS 418
Query: 177 FQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDK--MSGGFNH-GG--FLQG----HC 227
SV + S + FL +GS D ++ W + +S G H GG FLQ HC
Sbjct: 419 GHTHSVGTICCSRLKET-FLVTGSQDCTVKLWPLPEALLSKGTGHEGGPVFLQAQATQHC 477
Query: 228 FAV-LCLVAI---EKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEM 283
+ VA+ +KL+ +GS+D T ++W A C + L GHR + C+ S M
Sbjct: 478 HDKDINSVAVAPNDKLLATGSQDRTAKLW--ALPRC--QLLGTFSGHRRGLWCVQFS-PM 532
Query: 284 EKVVMGFLVYSSSLDQTFKVWRVK 307
++V+ ++S D T K+W ++
Sbjct: 533 DQVLA-----TASADGTIKLWALQ 551
Score = 121 (47.7 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 42/149 (28%), Positives = 66/149 (44%)
Query: 63 RTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKR 122
RT K+ LPR +FS HR + C+ F + +L T S D T+K W + D
Sbjct: 501 RTAKLWALPRCQLLGTFSG------HRRGLWCVQFSPMDQVLATASADGTIKLWALQD-- 552
Query: 123 CTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSV 182
+C+ +F H+++V + + + SDG +K+W + N TL + V
Sbjct: 553 FSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLW--TIKNNE--CVRTLDAHEDKV 608
Query: 183 NALALSSFFDNYFLYSGSSDGSINFWEKD 211
L S D +G+SD + W KD
Sbjct: 609 WGLHCSRLDDRAL--TGASDSRVVLW-KD 634
Score = 120 (47.3 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 52/237 (21%), Positives = 100/237 (42%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDK-RCTCVDSFVAHESNVNAIVVNQ-DD 145
H D V + + L + + D++++ WR+ CV H +V I ++ +
Sbjct: 375 HTDIVLALDVFRKGRLFASCAKDQSIRVWRMNKSGEVACVAQGSGHTHSVGTICCSRLKE 434
Query: 146 GFVFTCSSDGSVKIW----RRVYRENSHT-------LTMTLKFQQSSVNALALSSFFDNY 194
F+ T S D +VK+W + + H T +N++A++ ++
Sbjct: 435 TFLVTGSQDCTVKLWPLPEALLSKGTGHEGGPVFLQAQATQHCHDKDINSVAVAP--NDK 492
Query: 195 FLYSGSSDGSINFWE--KDKMSGGFNHGGFLQGHCFAVLCLV--AIEKLIFSGSEDTTIR 250
L +GS D + W + ++ G F+ GH + C+ +++++ + S D TI+
Sbjct: 493 LLATGSQDRTAKLWALPRCQLLGTFS------GHRRGLWCVQFSPMDQVLATASADGTIK 546
Query: 251 VWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
+W + CL +GH V L++ V G + SS D K+W +K
Sbjct: 547 LWALQD----FSCLKTFEGHDASV------LKVAFVSRGTQLLSSGSDGLLKLWTIK 593
Score = 99 (39.9 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 69/282 (24%), Positives = 112/282 (39%)
Query: 29 HGEVRAILAHD----NMLFTT-NKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFLSFSKSN 83
HG +LA D LF + KD IR+W S +V + + S +
Sbjct: 373 HGHTDIVLALDVFRKGRLFASCAKDQSIRVWRMNKSG-----EVACVAQGSG-------H 420
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAW---RVLDKRCTCVDS---FV------- 130
T C S + E L TGS D TVK W L + T + F+
Sbjct: 421 THSVGTICCSRLK----ETFLVTGSQDCTVKLWPLPEALLSKGTGHEGGPVFLQAQATQH 476
Query: 131 AHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSF 190
H+ ++N++ V +D + T S D + K+W + L T + + + S
Sbjct: 477 CHDKDINSVAVAPNDKLLATGSQDRTAKLWALPRCQ----LLGTFSGHRRGLWCVQFSPM 532
Query: 191 FDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK---LIFSGSEDT 247
+ L + S+DG+I W F+ +GH +VL + + + L+ SGS D
Sbjct: 533 --DQVLATASADGTIKLWALQD----FSCLKTFEGHDASVLKVAFVSRGTQLLSSGS-DG 585
Query: 248 TIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMG 289
+++W +EC+ LD H V L S ++ + G
Sbjct: 586 LLKLWTIKN----NECVRTLDAHEDKVWGLHCSRLDDRALTG 623
Score = 64 (27.6 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN----MLFTTNKDCKIRIWN 55
++ TG +RVW C + G V + H + +LF++ D IR+W+
Sbjct: 123 LLATGGCDGAVRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPARLLLFSSAADTSIRVWS 181
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 158 (60.7 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 51/153 (33%), Positives = 67/153 (43%)
Query: 152 SSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKD 211
S D ++K+W V N L TL V SS + SGS+D ++ W+ D
Sbjct: 1012 SDDNTLKVWSAV---NGKCLR-TLVGHTGGV----WSSQMSGNIIISGSTDRTLKVWDMD 1063
Query: 212 KMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHR 271
SG H LQGH V C+ + SGS D T+RVW +G C H VL GH
Sbjct: 1064 --SGACVHT--LQGHTSTVRCMHLHGSKVVSGSRDATLRVWDIEQGSCLH----VLVGHL 1115
Query: 272 GPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
VRC+ G L+ S + D K+W
Sbjct: 1116 AAVRCVQYD--------GKLIVSGAYDYMVKIW 1140
Score = 150 (57.9 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 55/204 (26%), Positives = 90/204 (44%)
Query: 103 LLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRR 162
++ +GS D+T+K W +D CV + H S V + ++ V + S D ++++W
Sbjct: 1047 IIISGSTDRTLKVWD-MDSGA-CVHTLQGHTSTVRCMHLHGSK--VVSGSRDATLRVWDI 1102
Query: 163 VYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGF 222
H L L ++V + +D + SG+ D + W ++ H
Sbjct: 1103 EQGSCLHVLVGHL----AAVRCVQ----YDGKLIVSGAYDYMVKIWHPERQE--CLHT-- 1150
Query: 223 LQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLE 282
LQGH V L + SGS DT+IRVW G C H L GH+ L + +E
Sbjct: 1151 LQGHTNRVYSLQFDGLHVVSGSLDTSIRVWDVETGNCKH----TLMGHQS----LTSGME 1202
Query: 283 MEKVVMGFLVYSSSLDQTFKVWRV 306
+ + ++ S + D T KVW +
Sbjct: 1203 LRQNIL----VSGNADSTVKVWDI 1222
Score = 147 (56.8 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 49/183 (26%), Positives = 85/183 (46%)
Query: 81 KSNTQQQHRD-CVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAI 139
K + H D ++C+ F + + +GS D T+K W ++ +C + + V H V +
Sbjct: 986 KPKVLKGHDDHVITCLQF--SGNRIVSGSDDNTLKVWSAVNGKC--LRTLVGHTGGVWS- 1040
Query: 140 VVNQDDG-FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYS 198
+Q G + + S+D ++K+W +S TL+ S+V + L + S
Sbjct: 1041 --SQMSGNIIISGSTDRTLKVWDM----DSGACVHTLQGHTSTVRCMHLHGSK----VVS 1090
Query: 199 GSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGG 258
GS D ++ W+ ++ G H L GH AV C+ KLI SG+ D +++W
Sbjct: 1091 GSRDATLRVWDIEQ--GSCLH--VLVGHLAAVRCVQYDGKLIVSGAYDYMVKIWHPERQE 1146
Query: 259 CYH 261
C H
Sbjct: 1147 CLH 1149
Score = 126 (49.4 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 52/192 (27%), Positives = 85/192 (44%)
Query: 88 HRDCVSCMAFYHAEG-LLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDG 146
H V C+ + +G L+ +G++D VK W +R C+ + H + V ++ Q DG
Sbjct: 1114 HLAAVRCVQY---DGKLIVSGAYDYMVKIWH--PERQECLHTLQGHTNRVYSL---QFDG 1165
Query: 147 F-VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSI 205
V + S D S+++W HTL QS + + L N L SG++D ++
Sbjct: 1166 LHVVSGSLDTSIRVWDVETGNCKHTLMG----HQSLTSGMELRQ---N-ILVSGNADSTV 1217
Query: 206 NFWEKDKMSGGFNHGGFLQG---HCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHE 262
W D +G L G H AV CL + + + S+D T+++W G
Sbjct: 1218 KVW--DITTGQCLQT--LSGPNKHHSAVTCLQFNSRFVVTSSDDGTVKLWDVKTGDFIRN 1273
Query: 263 CLAVLDGHRGPV 274
+A+ G G V
Sbjct: 1274 LVALDSGGSGGV 1285
Score = 124 (48.7 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 38/110 (34%), Positives = 53/110 (48%)
Query: 198 SGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEG 257
SGS D ++ W+ ++ G H L GH AV C+ KLI SG+ D +++W
Sbjct: 1090 SGSRDATLRVWDIEQ--GSCLH--VLVGHLAAVRCVQYDGKLIVSGAYDYMVKIWHPER- 1144
Query: 258 GCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
ECL L GH V SL+ + G V S SLD + +VW V+
Sbjct: 1145 ---QECLHTLQGHTNRVY----SLQFD----GLHVVSGSLDTSIRVWDVE 1183
Score = 120 (47.3 bits), Expect = 0.00096, P = 0.00096
Identities = 38/117 (32%), Positives = 50/117 (42%)
Query: 191 FDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIR 250
F + SGS D ++ W ++G L GH V +I SGS D T++
Sbjct: 1003 FSGNRIVSGSDDNTLKVWSA--VNGKCLRT--LVGHTGGVWSSQMSGNIIISGSTDRTLK 1058
Query: 251 VWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
VW G C H L GH VRC+ L KVV G S D T +VW ++
Sbjct: 1059 VWDMDSGACVH----TLQGHTSTVRCM--HLHGSKVVSG------SRDATLRVWDIE 1103
Score = 119 (46.9 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 37/117 (31%), Positives = 55/117 (47%)
Query: 191 FDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIR 250
FD + SGS D SI W+ + +G H L GH + + ++ SG+ D+T++
Sbjct: 1163 FDGLHVVSGSLDTSIRVWDVE--TGNCKHT--LMGHQSLTSGMELRQNILVSGNADSTVK 1218
Query: 251 VWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
VW G C + L+ + H V CL + F+V SS D T K+W VK
Sbjct: 1219 VWDITTGQCL-QTLSGPNKHHSAVTCLQFNSR-------FVVTSSD-DGTVKLWDVK 1266
Score = 62 (26.9 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 12/57 (21%), Positives = 29/57 (50%)
Query: 1 MVFTGSSSTRIRVWRQPD--CVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWN 55
++ +GS+ ++VW CV ++ VR + H + + + ++D +R+W+
Sbjct: 1047 IIISGSTDRTLKVWDMDSGACVHT--LQGHTSTVRCMHLHGSKVVSGSRDATLRVWD 1101
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 149 (57.5 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 54/181 (29%), Positives = 84/181 (46%)
Query: 131 AHESNVNAIVVNQDDG-FVFTCSSDGSVKIWRRVYRENSHTLTMT-LKFQQSSVNALALS 188
AH V AI D+ + T S D S+ +W+ + S+ + L V + LS
Sbjct: 13 AHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLS 72
Query: 189 SFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLV--AIEKLIFSGSED 246
S D F SGS DG + W+ ++ G F+ GH VL + + I S S D
Sbjct: 73 S--DGQFALSGSWDGELRLWD---LATGETTRRFV-GHTKDVLSVAFSTDNRQIVSASRD 126
Query: 247 TTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRV 306
TI++W G C + ++ DGH+ V C+ S ++ +V S+S D+T KVW +
Sbjct: 127 RTIKLWNTL-GECKYT-ISEGDGHKEWVSCVRFS---PNTLVPTIV-SASWDKTVKVWNL 180
Query: 307 K 307
+
Sbjct: 181 Q 181
Score = 124 (48.7 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 44/179 (24%), Positives = 79/179 (44%)
Query: 88 HRDCVSCMAFYHAEGL--LYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDD 145
H++ VSC+ F + + + S+DKTVK W + + C +S V H +N + V+ D
Sbjct: 148 HKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL--QNCKLRNSLVGHSGYLNTVAVSPDG 205
Query: 146 GFVFTCSSDGSVKIW-----RRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYF-LYSG 199
+ DG + +W +++Y + ++ +L F S N L + +N ++
Sbjct: 206 SLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCF---SPNRYWLCAATENSIRIWDL 262
Query: 200 SSDGSINFWEKD-KMSGGFNHGGFLQGHCFAVLCLVAIE-----KLIFSGSEDTTIRVW 252
S + + D K N GG G+ V+ ++ +FSG D +RVW
Sbjct: 263 ESKSVVEDLKVDLKSEAEKNEGGVGTGNQKKVIYCTSLNWSADGSTLFSGYTDGVVRVW 321
Score = 118 (46.6 bits), Expect = 0.00023, P = 0.00023
Identities = 57/226 (25%), Positives = 91/226 (40%)
Query: 88 HRDCVSCMAF-YHAEGLLYTGSFDKTVKAWRVL--DKRCTCVDS-FVAHESNVNAIVVNQ 143
H D V+ +A ++ T S DK++ W++ DK H V +V++
Sbjct: 14 HTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSS 73
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
D F + S DG +++W E T +F + + L+++ DN + S S D
Sbjct: 74 DGQFALSGSWDGELRLWDLATGET------TRRFVGHTKDVLSVAFSTDNRQIVSASRDR 127
Query: 204 SINFWE-----KDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGG 258
+I W K +S G H ++ F+ LV I S S D T++VW
Sbjct: 128 TIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPT---IVSASWDKTVKVWNLQN-- 182
Query: 259 CYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
C + L GH G + +A S + G L S D +W
Sbjct: 183 C--KLRNSLVGHSGYLNTVAVSPD------GSLCASGGKDGVILLW 220
Score = 46 (21.3 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 20 VERGFIKARHGEVRAILAH-DN--MLFTTNKDCKIRIWNFTVSD 60
V +G ++A V AI DN ++ T ++D I +W T D
Sbjct: 6 VLKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDD 49
Score = 42 (19.8 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 12/54 (22%), Positives = 24/54 (44%)
Query: 4 TGSSSTRIRVWRQPDC-VERGFIKARHGEVRAILAHDN-MLFTTNKDCKIRIWN 55
+GS +R+W R F+ + + DN + + ++D I++WN
Sbjct: 80 SGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN 133
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 148 (57.2 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 52/180 (28%), Positives = 84/180 (46%)
Query: 131 AHESNVNAIVVNQDDG-FVFTCSSDGSVKIWRRVYRENSHTLTMT-LKFQQSSVNALALS 188
AH V AI D+ + + S D S+ +W+ + ++ + L V + LS
Sbjct: 13 AHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLS 72
Query: 189 SFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLV-AIE-KLIFSGSED 246
S D F SGS DG + W+ ++ G + F+ GH VL + +++ + I S S D
Sbjct: 73 S--DGQFALSGSWDGELRLWD---LAAGVSTRRFV-GHTKDVLSVAFSLDNRQIVSASRD 126
Query: 247 TTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRV 306
TI++W G C + +GHR V C+ S + +V S+S D+T KVW +
Sbjct: 127 RTIKLWNTL-GECKYTISEGGEGHRDWVSCVRFS---PNTLQPTIV-SASWDKTVKVWNL 181
Score = 133 (51.9 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 52/207 (25%), Positives = 93/207 (44%)
Query: 84 TQQQHRDCVSCMA--FYHAEGLLYTGSFDKTVKAWRVL-DKRCTCVDS--FVAHESNVNA 138
T + H D V+ +A +A+ ++ + S DK++ W++ D + V H V
Sbjct: 10 TMRAHTDMVTAIATPIDNAD-IIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVED 68
Query: 139 IVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYS 198
+V++ D F + S DG +++W + T +F + + L+++ DN + S
Sbjct: 69 VVLSSDGQFALSGSWDGELRLW------DLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVS 122
Query: 199 GSSDGSINFWEK-DKMSGGFNHGGFLQGHCFAVLCLV----AIEKLIFSGSEDTTIRVWR 253
S D +I W + + GG +GH V C+ ++ I S S D T++VW
Sbjct: 123 ASRDRTIKLWNTLGECKYTISEGG--EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWN 180
Query: 254 RAEGGCYHECLAVLDGHRGPVRCLAAS 280
+ C + + L GH G V +A S
Sbjct: 181 LSN--C--KLRSTLAGHTGYVSTVAVS 203
Score = 118 (46.6 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 35/138 (25%), Positives = 61/138 (44%)
Query: 79 FSKSNTQQQHRDCVSCMAFYH--AEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNV 136
++ S + HRD VSC+ F + + + S+DKTVK W + C + H V
Sbjct: 140 YTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNL--SNCKLRSTLAGHTGYV 197
Query: 137 NAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFL 196
+ + V+ D + DG V +W + ++L S ++AL S + Y+L
Sbjct: 198 STVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN-----SVIHALCFSP--NRYWL 250
Query: 197 YSGSSDGSINFWEKDKMS 214
+ + G I W+ + S
Sbjct: 251 CAATEHG-IKIWDLESKS 267
Score = 45 (20.9 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 13/54 (24%), Positives = 25/54 (46%)
Query: 4 TGSSSTRIRVWRQPDCVE-RGFIKARHGEVRAILAHDN-MLFTTNKDCKIRIWN 55
+GS +R+W V R F+ + + DN + + ++D I++WN
Sbjct: 80 SGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWN 133
Score = 43 (20.2 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 240 IFSGSEDTTIRVW 252
+FSG D IRVW
Sbjct: 310 LFSGYTDGVIRVW 322
Score = 41 (19.5 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 20 VERGFIKARHGEVRAILAH-DN--MLFTTNKDCKIRIWNFTVSD 60
V +G ++A V AI DN ++ + ++D I +W T D
Sbjct: 6 VLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDD 49
>WB|WBGene00001679 [details] [associations]
symbol:gpb-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0040013 "negative
regulation of locomotion" evidence=IMP] [GO:0046662 "regulation of
oviposition" evidence=IMP] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0009792 GO:GO:0000132
GO:GO:0035046 GO:GO:0018991 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0040013 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0004871
GO:GO:0046662 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 OMA:CMLWDIE
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X17497 EMBL:AF291846
EMBL:Z49127 PIR:S09591 PIR:T20830 RefSeq:NP_001254312.1
UniGene:Cel.6600 ProteinModelPortal:P17343 SMR:P17343 STRING:P17343
PaxDb:P17343 PRIDE:P17343 EnsemblMetazoa:F13D12.7a.1
EnsemblMetazoa:F13D12.7a.2 EnsemblMetazoa:F13D12.7a.3 GeneID:174803
KEGG:cel:CELE_F13D12.7 UCSC:F13D12.7.1 CTD:174803
WormBase:F13D12.7a InParanoid:P17343 KO:K07972 NextBio:885576
ArrayExpress:P17343 Uniprot:P17343
Length = 340
Score = 135 (52.6 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 55/222 (24%), Positives = 91/222 (40%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRV-LDKRCTCVDSFVAHESNVNAIVVNQDDG 146
H +SC F + + T S D T W + ++CT +F H +V ++ ++ D
Sbjct: 142 HTGYLSCCRFLD-DNQIVTSSGDMTCALWDIETGQQCT---AFTGHTGDVMSLSLSPDFR 197
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFD--NYFLYSGSSDGS 204
+ + D S K+W R+ T +S +NA+A FF N F +GS D +
Sbjct: 198 TFISGACDASAKLWD--IRDGM--CKQTFPGHESDINAVA---FFPSGNAFA-TGSDDAT 249
Query: 205 INFWE--KDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHE 262
++ D+ ++H + G + +L+F+G +D VW E
Sbjct: 250 CRLFDIRADQELAMYSHDNIICG--ITSVAFSKSGRLLFAGYDDFNCNVWDSMR----QE 303
Query: 263 CLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
VL GH V CL + + G V + S D K+W
Sbjct: 304 RAGVLAGHDNRVSCLGVTED------GMAVCTGSWDSFLKIW 339
Score = 53 (23.7 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 42 LFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFL 77
L + ++D K+ +W D++ T KV +P RSS++
Sbjct: 70 LVSASQDGKLIVW-----DSYTTNKVHAIPLRSSWV 100
>POMBASE|SPBC15D4.14 [details] [associations]
symbol:taf73 "transcription factor TFIID complex subunit
Taf5-like" species:4896 "Schizosaccharomyces pombe" [GO:0000991
"core RNA polymerase II binding transcription factor activity"
evidence=IC] [GO:0005669 "transcription factor TFIID complex"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0030071 "regulation of mitotic
metaphase/anaphase transition" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
PomBase:SPBC15D4.14 GO:GO:0005829 GO:GO:0006355 GO:GO:0030071
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0006367
GO:GO:0000991 GO:GO:0005669 KO:K03130 HOGENOM:HOG000212424
EMBL:AB039954 PIR:T39490 RefSeq:NP_596254.1
ProteinModelPortal:O74319 IntAct:O74319 STRING:O74319
EnsemblFungi:SPBC15D4.14.1 GeneID:2539882 KEGG:spo:SPBC15D4.14
OMA:CATISED OrthoDB:EOG4CRQ92 NextBio:20801027 Uniprot:O74319
Length = 642
Score = 152 (58.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 40/132 (30%), Positives = 66/132 (50%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H++ V C++F+ L TGS D T + W V + V F AH S V+A+ ++ D
Sbjct: 486 HQNDVDCVSFHPNAAYLATGSSDHTTRMWDV--RTGGTVRVFNAHHSPVSALCMSADGLS 543
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ + G +K+W + N H + F + S +LS +DN L SG +D +NF
Sbjct: 544 LASADESGIIKVWD-LRSSNQH-----VSFVKHSSIVYSLSFSYDNKILVSGGADTDVNF 597
Query: 208 WE---KDKMSGG 216
W+ ++ +S G
Sbjct: 598 WDLTYRNNLSDG 609
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 149 (57.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 48/165 (29%), Positives = 74/165 (44%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H+D V+C+ F + LL + S DKTV+ W V + V F AH +V ++ + D
Sbjct: 59 HKDAVTCVQFSPSAHLLASSSRDKTVRLW-VPSVKGESV-LFRAHTGSVRSVCFSADGQS 116
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ T S D S+K+W V+R+ + TL+ + V S D + S S D ++
Sbjct: 117 LLTASDDQSIKLWS-VHRQK---IICTLREHNNWVRCARFSP--DGQLMVSVSDDRTVKL 170
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVW 252
W D S H G + + I + S D T+RVW
Sbjct: 171 W--DASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVW 213
Score = 116 (45.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 48/194 (24%), Positives = 84/194 (43%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQ 143
T ++H + V C F L+ + S D+TVK W ++ + +F + + +
Sbjct: 139 TLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQL--IHTFCEPGGYSSYVDFHP 196
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
+ T SSD +V++W +HTL + ++VNAL+ N+ L + SSD
Sbjct: 197 SSTCIATASSDNTVRVWDI----RTHTLLQHYQVHSAAVNALSFHPS-GNHLL-TASSDS 250
Query: 204 SINFWEKDKMSGGFNHGGFLQGHCFAVLCLV---AIEKLIFSGSEDTTIRVWR-RAEGGC 259
++ D + G + L GH + C+ + ++ +GS D + VWR +
Sbjct: 251 TLKIL--DLLEGRLLYT--LHGHQGSASCVSFSRSGDQFASAGS-DQQVMVWRTNFDSVD 305
Query: 260 YHECLAVLDGHRGP 273
Y L HR P
Sbjct: 306 YSRVLQQKRDHRTP 319
Score = 55 (24.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 19/89 (21%), Positives = 39/89 (43%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAIL--AHDNMLFTTNKDCKIRIWNFTV 58
++ + S +R+W E +A G VR++ A L T + D I++W+
Sbjct: 74 LLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSV-- 131
Query: 59 SDNFRTKKVTTLPRRSSFLSFSKSNTQQQ 87
R K + TL ++++ ++ + Q
Sbjct: 132 ---HRQKIICTLREHNNWVRCARFSPDGQ 157
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 152 (58.6 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 49/180 (27%), Positives = 84/180 (46%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQ 143
T H+ +S + F+ L +GS D +K W V +R CV + H V + +
Sbjct: 100 TLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDV--RRKGCVFRYKGHTQAVRCLAFSP 157
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDN-YFLYSGSSD 202
D ++ + S D +VK+W + + M +F S +A+ + F N Y L SGS+D
Sbjct: 158 DGKWLASASDDSTVKLWDLIAGK------MITEFT-SHTSAVNVVQFHPNEYLLASGSAD 210
Query: 203 GSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KLIFSGSEDTTIRVWRRAEGGCY 260
++ W+ +K FN G +G V ++ ++SGSE+T +RV+ C+
Sbjct: 211 RTVKLWDLEK----FNMIGSSEGETGVVRSVLFNPDGSCLYSGSENT-LRVYGWEPDRCF 265
Score = 150 (57.9 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 48/168 (28%), Positives = 76/168 (45%)
Query: 88 HRDCVSCMAFYHAEG-LLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDG 146
H VS + + G LL TG D V W V + C+ S H S V I N +
Sbjct: 19 HSSNVSSLVLGKSSGRLLATGGEDCRVNIWAV--SKPNCIMSLTGHTSAVGCIQFNSSEE 76
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
V S GS+++W + + TL ++S+++L + +L SGS D +I
Sbjct: 77 RVVAGSLSGSLRLWDL----EAAKILRTLMGHKASISSLDFHPMGE--YLASGSVDSNIK 130
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KLIFSGSEDTTIRVW 252
W+ + F + +GH AV CL K + S S+D+T+++W
Sbjct: 131 LWDVRRKGCVFRY----KGHTQAVRCLAFSPDGKWLASASDDSTVKLW 174
Score = 121 (47.7 bits), Expect = 0.00034, P = 0.00034
Identities = 45/158 (28%), Positives = 71/158 (44%)
Query: 126 VDSFVAHESNVNAIVVNQDDG-FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNA 184
+ VAH SNV+++V+ + G + T D V IW V + N M+L S+V
Sbjct: 13 LQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWA-VSKPNC---IMSLTGHTSAVGC 68
Query: 185 LALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLV--AIEKLIFS 242
+ +S + + +GS GS+ W+ + L GH ++ L + + + S
Sbjct: 69 IQFNSSEER--VVAGSLSGSLRLWDLEAAKILRT----LMGHKASISSLDFHPMGEYLAS 122
Query: 243 GSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAAS 280
GS D+ I++W GC GH VRCLA S
Sbjct: 123 GSVDSNIKLWDVRRKGCVFR----YKGHTQAVRCLAFS 156
Score = 43 (20.2 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 41 MLFTTNKDCKIRIW 54
+L T +DC++ IW
Sbjct: 35 LLATGGEDCRVNIW 48
Score = 42 (19.8 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 1 MVFTGSSSTRIRVWR--QPDCV 20
++ TG R+ +W +P+C+
Sbjct: 35 LLATGGEDCRVNIWAVSKPNCI 56
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 135 (52.6 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 50/170 (29%), Positives = 75/170 (44%)
Query: 87 QHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDG 146
+H V C F L+ + S DKT+K W +K+C V++F N + N +
Sbjct: 142 RHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC--VNNFSDSVGFANFVDFNPNGT 199
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
+ + SD +VKIW R N L + VN ++ NY + + SSDG++
Sbjct: 200 CIASAGSDHTVKIWD--IRVNK--LLQHYQVHSGGVNCVSFHPS-GNYII-TASSDGTLK 253
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK---LIFSGSEDTTIRVWR 253
D + G + LQGH V V+ K L SG DT + +WR
Sbjct: 254 IL--DLLEGRLIYT--LQGHTGPVFT-VSFSKGGELFSSGGADTQVLLWR 298
Score = 126 (49.4 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 51/192 (26%), Positives = 80/192 (41%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H+D V+ + F LL + S D+TV+ W + DKR + F AH + V ++ + D F
Sbjct: 59 HKDVVTSVQFSPLGNLLASASRDRTVRLW-IPDKRGKSSE-FKAHTAPVRSVDFSADGQF 116
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ T S D S+K+W +YR+ +L V S D + S S D +I
Sbjct: 117 LATASEDKSIKVWN-MYRQR---FLYSLYRHTHWVRCAKFSP--DGRLIVSCSEDKTIKI 170
Query: 208 WEKDKMSGGFNHGGFLQGHCFA-VLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAV 266
W+ N F FA + I S D T+++W ++ L
Sbjct: 171 WDTTNKQCVNN---FSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIR----VNKLLQH 223
Query: 267 LDGHRGPVRCLA 278
H G V C++
Sbjct: 224 YQVHSGGVNCVS 235
Score = 114 (45.2 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 48/197 (24%), Positives = 84/197 (42%)
Query: 81 KSNTQQQHRDCVSCMAFYHAEG-LLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAI 139
KS+ + H V + F A+G L T S DK++K W + +R + S H V
Sbjct: 94 KSSEFKAHTAPVRSVDF-SADGQFLATASEDKSIKVWNMYRQRF--LYSLYRHTHWVRCA 150
Query: 140 VVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSG 199
+ D + +CS D ++KIW ++ + + ++ F N + + + + S
Sbjct: 151 KFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF----ANFVDFNP--NGTCIASA 204
Query: 200 SSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLV--AIEKLIFSGSEDTTIRVWRRAEG 257
SD ++ W+ +++ H Q H V C+ I + S D T+++ EG
Sbjct: 205 GSDHTVKIWDI-RVNKLLQH---YQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEG 260
Query: 258 GCYHECLAVLDGHRGPV 274
+ L GH GPV
Sbjct: 261 ----RLIYTLQGHTGPV 273
Score = 57 (25.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 26/99 (26%), Positives = 47/99 (47%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGF---IKARHGEVRAI--LAHDNMLFTTNKDCKIRIWN 55
++ + S +R+W PD +RG KA VR++ A L T ++D I++WN
Sbjct: 74 LLASASRDRTVRLWI-PD--KRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWN 130
Query: 56 FTVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSC 94
+R + + +L R + ++ +K + R VSC
Sbjct: 131 M-----YRQRFLYSLYRHTHWVRCAKFSPDG--RLIVSC 162
Score = 44 (20.5 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 19/75 (25%), Positives = 30/75 (40%)
Query: 4 TGSSSTRIRVWR-QPDCVERGFIKARHGEVRAILAHD---NMLFTTNKDCKIRIWNFTVS 59
T S T + +W +P R F H +V + N+L + ++D +R+W
Sbjct: 35 TASWDTFLMLWNCKPQA--RAFRYVGHKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKR 92
Query: 60 DNFRTKKVTTLPRRS 74
K T P RS
Sbjct: 93 GKSSEFKAHTAPVRS 107
>ZFIN|ZDB-GENE-041111-120 [details] [associations]
symbol:brwd1 "bromodomain and WD repeat domain
containing 1" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 ZFIN:ZDB-GENE-041111-120 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR011047
SUPFAM:SSF50998 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 EMBL:BX088654
EMBL:CT573306 IPI:IPI00898300 Ensembl:ENSDART00000115034
Uniprot:E7F145
Length = 2008
Score = 157 (60.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 67/267 (25%), Positives = 109/267 (40%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V C+AF ++TGS D VK W D R + H + ++ + VN ++
Sbjct: 10 HLSAVYCIAFDRTGSRIFTGSDDALVKIWSSFDGRLH--STLRGHYAEISDLAVNFENTL 67
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFF--DNYFLYSGSSDGSI 205
+ S D ++++W R + L+ S+ +L S F ++ S +D ++
Sbjct: 68 IAAGSCDKTIRVW--CLRTCAPVAV--LQGHSGSITSLQFSPFVKGSKRYMVSTGTDATV 123
Query: 206 NFWEKDKMSGGFN--HGGFLQGHCFAV--LCLVAIEKLIF--SGSEDTTIRVWRRAEGGC 259
FW+ D + F+ F + V +C +F +GS D IR++ G
Sbjct: 124 CFWQWDVNNNEFSDRQHKFTERPRPGVQTVCSSFSPGGMFLATGSTDDVIRIYYLGSGS- 182
Query: 260 YHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQEKTMCLD 319
E LA LD H V + E+ V G S D T ++WR+ Q K++ LD
Sbjct: 183 -PEKLAELDSHTDKVDSIQFCHSGERFVSG------SRDGTARIWRLH-QRHQWKSVLLD 234
Query: 320 YSDYHSNSKTTTTKMDYEMSPVLSPSW 346
S S T ++ V SW
Sbjct: 235 MSATLPGSAPLTDDENFFKPKVTMVSW 261
>UNIPROTKB|E1BB53 [details] [associations]
symbol:TEP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016363 "nuclear matrix" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005697 "telomerase holoenzyme
complex" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003720 "telomerase activity" evidence=IEA] [GO:0000722
"telomere maintenance via recombination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003723 GO:GO:0016363 GO:GO:0000722
InterPro:IPR007111 PROSITE:PS50837 GO:GO:0005697 GO:GO:0003720
GeneTree:ENSGT00690000102183 OMA:SVPDAWK InterPro:IPR025139
InterPro:IPR008850 Pfam:PF13271 Pfam:PF05386 PROSITE:PS51226
EMBL:DAAA02028332 IPI:IPI00689872 Ensembl:ENSBTAT00000001564
Uniprot:E1BB53
Length = 2627
Score = 158 (60.7 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 80/318 (25%), Positives = 137/318 (43%)
Query: 1 MVFTGSSSTRIRVWR-QPDCVERGFIKARHGE-VRAILAHDNMLFTTNKDCKIRIWNFTV 58
++ +G+ ++ W Q ++ ++ +RH + V + +L ++D +R+W
Sbjct: 1991 VLVSGAEDGALQGWLLQGGTLQSLWLLSRHRKPVLGLATSQELLAIASEDFTVRLW---- 2046
Query: 59 SDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGL-LYTGSFDKTVKAWR 117
+++ LP+++ F +S + H VSC +F +G L TG D+++ W
Sbjct: 2047 -----PRQLLMLPQKTE--DFPRSTELRGHEGPVSCCSF-STDGCRLATGGRDRSLLCWD 2098
Query: 118 V-LDKRCTCVDSFVA-HESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYREN-SHTLTMT 174
V K + SF A H V +D V +CSSDGSV +W R+ H L
Sbjct: 2099 VRTPKAPVLICSFSACHRDWVTGCAWTKDSLLV-SCSSDGSVALWDPESRQQLGHFLG-- 2155
Query: 175 LKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKD--KMSGGFNHGGFLQGHCFAVLC 232
Q +V+A+ + + + G DG++ W+ +M+ H G + HC A L
Sbjct: 2156 ---HQHAVSAVVA---VEEHVVSVGR-DGTLKVWDHQGVEMTSIPAHSGPIS-HCVAALE 2207
Query: 233 LVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLA----VLDGHRGPVRCLAASLEMEKVVM 288
A + GSE + V +H L L GH GPV A S
Sbjct: 2208 PRAAGQ---PGSELLVVTVGLDGATRLWHPLLVFQTHTLLGHSGPVSAAAVS-----ETS 2259
Query: 289 GFLVYSSSLDQTFKVWRV 306
G L+ +S D + ++W+V
Sbjct: 2260 GLLLTTSE-DGSLRLWQV 2276
>TAIR|locus:2057381 [details] [associations]
symbol:emb1345 "AT2G26060" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0009086 "methionine biosynthetic process" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC004747 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:AY093154
EMBL:AY085277 EMBL:BT003394 IPI:IPI00536484 PIR:T02617
RefSeq:NP_565615.1 UniGene:At.38940 ProteinModelPortal:O80990
SMR:O80990 PaxDb:O80990 PRIDE:O80990 EnsemblPlants:AT2G26060.1
GeneID:817147 KEGG:ath:AT2G26060 TAIR:At2g26060 InParanoid:O80990
PhylomeDB:O80990 ProtClustDB:CLSN2917143 ArrayExpress:O80990
Genevestigator:O80990 Uniprot:O80990
Length = 352
Score = 147 (56.8 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 47/179 (26%), Positives = 74/179 (41%)
Query: 81 KSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIV 140
K+ ++ H V A+ + LL T SFD T W+ C+ + HE+ V ++
Sbjct: 66 KTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVS 125
Query: 141 VNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGS 200
N + TCS D SV IW V N + L V + D L+S S
Sbjct: 126 WNASGSCLATCSRDKSVWIWE-VLEGNEYDCAAVLTGHTQDVKMVQWHPTMD--VLFSCS 182
Query: 201 SDGSINFWEKDKMSGGFNH----GGFLQGHCFAVLCL---VAIEKLIFSGSEDTTIRVW 252
D +I W + G + G GH V + A +K++ + S+D T+++W
Sbjct: 183 YDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMV-TCSDDLTLKIW 240
Score = 126 (49.4 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 55/219 (25%), Positives = 96/219 (43%)
Query: 99 HAEG---LLYTGSFDKTVKAWRV--LDKRCTCVDSFV-AHESNVNAIVVNQDDGFVFTCS 152
HA+G +L + S D TV+ W L + TC H V + + + T S
Sbjct: 34 HADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVRSCAWSPSGQLLATAS 93
Query: 153 SDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDK 212
DG+ IW+ Y ++ TL+ ++ V +++ ++ L + S D S+ WE
Sbjct: 94 FDGTTGIWKN-YGSEFECIS-TLEGHENEVKSVSWNA--SGSCLATCSRDKSVWIWEV-- 147
Query: 213 MSGG-FNHGGFLQGHCFAVLCLV--AIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVL-- 267
+ G ++ L GH V + ++FS S D TI+VW + ++C+ L
Sbjct: 148 LEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGE 207
Query: 268 --DGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
+GH V ++ + +K+V + S D T K+W
Sbjct: 208 SNNGHSSTVWSISFNAAGDKMV------TCSDDLTLKIW 240
Score = 116 (45.9 bits), Expect = 0.00044, P = 0.00044
Identities = 55/251 (21%), Positives = 103/251 (41%)
Query: 79 FSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLD-KRCTCVDSFVAHESNVN 137
F +T + H + V +++ + L T S DK+V W VL+ C H +V
Sbjct: 108 FECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVK 167
Query: 138 AIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTL----KFQQSSVNALALSSFFDN 193
+ + +F+CS D ++K+W + + TL S+V +++ ++ D
Sbjct: 168 MVQWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDK 227
Query: 194 YFLYSGSSDGSINFWEKD--KMSGGFNHGGF-----LQGHCFAVLCLV--AIEKLIFSGS 244
+ + S D ++ W D KM G + + L G+ + + + +I SG+
Sbjct: 228 --MVTCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRTIYSAHWSRDDIIASGA 285
Query: 245 EDTTIRVW-----RRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQ 299
D IR++ +G Y+ L H V S++ L+ S+S D
Sbjct: 286 GDNAIRLFVDSKHDSVDGPSYNLLLKKNKAHENDVN----SVQWSPGEGNRLLASASDDG 341
Query: 300 TFKVWRVKVMP 310
K+W++ P
Sbjct: 342 MVKIWQLATKP 352
>RGD|1307881 [details] [associations]
symbol:Rrp9 "ribosomal RNA processing 9, small subunit (SSU)
processome component, homolog (yeast)" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307881 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH473954
GeneTree:ENSGT00550000075093 HOGENOM:HOG000188732 KO:K14793
CTD:9136 HOVERGEN:HBG079296 OrthoDB:EOG4XKV6X EMBL:BC158778
IPI:IPI00869600 RefSeq:NP_001102248.1 UniGene:Rn.11840
STRING:B0BND5 Ensembl:ENSRNOT00000017469 GeneID:363134
KEGG:rno:363134 NextBio:682561 Genevestigator:B0BND5 Uniprot:B0BND5
Length = 478
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 60/223 (26%), Positives = 99/223 (44%)
Query: 35 ILAHDNMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQ---HRDC 91
I D +F+ KDC I W+ +K+ +PR +K TQ Q H
Sbjct: 157 ITPDDLAIFSAAKDCTIIKWSVETG-----RKLHVIPR-------AKKGTQGQPSGHSSH 204
Query: 92 VSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTC 151
+ CMA L +G K + W + C + +F H V+ + + +++
Sbjct: 205 ILCMAISSDGKYLASGDRSKLILIWEA--QSCQHLYTFTGHRDAVSGLAFRRGTHQLYST 262
Query: 152 SSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNAL-ALSSFFDNYFLYSGSSDGSINFWEK 210
S D SVK+W ENS+ TL Q +V AL ALS + +G DG++ W+
Sbjct: 263 SHDRSVKVWNAA--ENSYV--ETLFGHQDAVAALDALSR---ECCVTAGGRDGTVRVWKI 315
Query: 211 DKMSGGFNHGGFLQGHCFAVLCLVAI-EKLIFSGSEDTTIRVW 252
+ S +G QG ++ C+ I E+ + SG++D ++ +W
Sbjct: 316 PEESQLVFYGH--QG---SIDCIHLINEEHMVSGADDGSVALW 353
Score = 143 (55.4 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 47/180 (26%), Positives = 80/180 (44%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
HRD VS +AF LY+ S D++VK W + + V++ H+ V A+ +
Sbjct: 243 HRDAVSGLAFRRGTHQLYSTSHDRSVKVWNAAEN--SYVETLFGHQDAVAALDALSRECC 300
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
V DG+V++W+ E S + Q S++ + L + + SG+ DGS+
Sbjct: 301 VTAGGRDGTVRVWK--IPEESQ---LVFYGHQGSIDCIHL---INEEHMVSGADDGSVAL 352
Query: 208 WEKDKM--------SGGFNHG--GFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEG 257
W K + G HG G Q + + + L+ +GS + +R+W+ EG
Sbjct: 353 WGLSKKRPLALQREAHGL-HGEPGLEQPFWISSVAALLNTDLVATGSHNACVRLWQCGEG 411
>UNIPROTKB|F1NEH1 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000185 "activation of
MAPKKK activity" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50145
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 Pfam:PF00097
Prosite:PS00518 GO:GO:0043231 GO:GO:0005886 GO:GO:0006915
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043410 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 GO:GO:0000185
OMA:ALCIQGN EMBL:AADN02023658 EMBL:AADN02023655 EMBL:AADN02023656
EMBL:AADN02023657 IPI:IPI00600547 Ensembl:ENSGALT00000009263
ArrayExpress:F1NEH1 Uniprot:F1NEH1
Length = 670
Score = 151 (58.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 70/274 (25%), Positives = 113/274 (41%)
Query: 1 MVFTGSSSTRIRVWRQPDCVE-RGFIKARHGEVRAILAHDNMLFTTNKDCKIRIW---NF 56
++F+GSS I+VW + + ++ G V A+ N L++ + DC I +W N
Sbjct: 410 LLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGNKLYSGSADCTIIVWDIQNL 469
Query: 57 TVSDNFRT--KKVTTLPRRSSFLSFSKSNTQQQHRDCVSC---------------MAFYH 99
+ R V TL + L FS S + D V A
Sbjct: 470 QKVNTIRAHDNPVCTLVSSHNML-FSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVA 528
Query: 100 AEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSS-DGSVK 158
++ LY+GS+ +T+K W + + CV +V +I V C + + +
Sbjct: 529 SQNYLYSGSY-QTIKIWDI--RNLECVHVLQTSGGSVYSIAVTNHH---IVCGTYENLIH 582
Query: 159 IWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFN 218
+W +E TLT + +V ALA+ S D ++S S D S+ W D M
Sbjct: 583 VWDIETKEQVRTLTGHV----GTVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQT 638
Query: 219 HGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVW 252
L H +V L +FSG+ D+T++VW
Sbjct: 639 ----LLRHQGSVTALAVSRGRLFSGAVDSTVKVW 668
Score = 120 (47.3 bits), Expect = 0.00042, P = 0.00042
Identities = 50/186 (26%), Positives = 81/186 (43%)
Query: 79 FSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCT---CVDSFVAHESN 135
F T H+ V C+ Y LL++GS DKT+K W CT C + H+
Sbjct: 386 FKCKGTFVGHQGPVWCLCVYSIGDLLFSGSSDKTIKVWDT----CTTYKCQKTLEGHDGI 441
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYF 195
V A+ + + +++ S+D ++ +W +N + T++ + V L S +
Sbjct: 442 VLALCIQGNK--LYSGSADCTIIVWDI---QNLQKVN-TIRAHDNPVCTLVSS----HNM 491
Query: 196 LYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRA 255
L+SGS +I W D + L G V LVA + ++SGS T I++W
Sbjct: 492 LFSGSLK-AIKVW--DIVGTELKLKKELTGLNHWVRALVASQNYLYSGSYQT-IKIWDIR 547
Query: 256 EGGCYH 261
C H
Sbjct: 548 NLECVH 553
>DICTYBASE|DDB_G0292834 [details] [associations]
symbol:DDB_G0292834 "cyclin-like F-box containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
dictyBase:DDB_G0292834 InterPro:IPR001480 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
EMBL:AAFI02000197 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 PROSITE:PS50927 RefSeq:XP_629376.1
ProteinModelPortal:Q54CP0 STRING:Q54CP0 EnsemblProtists:DDB0237860
GeneID:8628894 KEGG:ddi:DDB_G0292834 OMA:HNEGIRA Uniprot:Q54CP0
Length = 569
Score = 150 (57.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 82/332 (24%), Positives = 135/332 (40%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSDN 61
V+TGS +VW R + + ++ + ++N++ T + D IRIW+ +
Sbjct: 246 VYTGSFDKTAKVWDTKTKKCRFTLAGHYYPIQCLDVNNNIMATGSLDNSIRIWDL---EK 302
Query: 62 FRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDK 121
++K + T R +F F Q + +GS D TVK W + +
Sbjct: 303 GKSKGILTT-RAHNFDVFCLQQIGDQ----------------IISGSSDSTVKVWNIAEI 345
Query: 122 RCTCVDSFVAHESNVNAIVVN-QDDGFV----FTCSSD---------GSVKIWRRVY-RE 166
++ E A+ N +D F FT D V + + R
Sbjct: 346 INDSIEIPDTEEEEEEALQDNVMNDPFAVNNSFTSLPDINEPDHVHTNIVSVNDKTSTRY 405
Query: 167 NSHTLTMTLKFQ-QSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQG 225
+H L+ T F+ QS V L + + N L SG SD + W+ + S L G
Sbjct: 406 RNHNLSSTHTFKHQSCVTCLQV---YGN-ILMSGGSDRVVRVWDLNT-SQPIQ---ILSG 457
Query: 226 HCFAVLCLVAIEKLIFSGSEDTTIRVWR-RAEGGCYHECLAVLDGHRGPVRCLAASLEME 284
H + L ++ +GS+DTT+RVW R++ + ++ L GH G VRCL
Sbjct: 458 HNEGIRALQFNGNVLVTGSDDTTVRVWDLRSK----NSNISTLRGHNGSVRCLQWD---- 509
Query: 285 KVVMGFLVYSSSLDQTFKVWRVKVMPDQEKTM 316
G + + S DQ+ + W + DQ K +
Sbjct: 510 ----GTTLITGSNDQSVRWWNLNYDSDQSKEL 537
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 40/128 (31%), Positives = 60/128 (46%)
Query: 130 VAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSS 189
+ H V A+ + DD V+T S D + K+W ++ TL + L ++
Sbjct: 230 IGHTGTVWAL--HLDDERVYTGSFDKTAKVWDTKTKK----CRFTLAGHYYPIQCLDVN- 282
Query: 190 FFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFL-QGHCFAVLCLVAIEKLIFSGSEDTT 248
N + +GS D SI W+ +K G + G + H F V CL I I SGS D+T
Sbjct: 283 ---NNIMATGSLDNSIRIWDLEK---GKSKGILTTRAHNFDVFCLQQIGDQIISGSSDST 336
Query: 249 IRVWRRAE 256
++VW AE
Sbjct: 337 VKVWNIAE 344
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 135 (52.6 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 50/170 (29%), Positives = 74/170 (43%)
Query: 87 QHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDG 146
+H V C F L+ + S DKT+K W +K+C V++F N + N
Sbjct: 142 RHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC--VNNFSDSVGFANFVDFNPSGT 199
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
+ + SD +VK+W R N L + VN ++ NY L + SSDG++
Sbjct: 200 CIASAGSDQTVKVWD--VRVNK--LLQHYQVHSGGVNCISFHPS-GNY-LITASSDGTLK 253
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK---LIFSGSEDTTIRVWR 253
D + G + LQGH V V+ K L SG DT + +WR
Sbjct: 254 IL--DLLEGRLIYT--LQGHTGPVFT-VSFSKGGELFASGGADTQVLLWR 298
Score = 128 (50.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 52/192 (27%), Positives = 79/192 (41%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H+D V+ + F LL + S D+TV+ W + DKR F AH + V ++ + D F
Sbjct: 59 HKDVVTSVQFSPHGNLLASASRDRTVRLW-IPDKRGK-FSEFKAHTAPVRSVDFSADGQF 116
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ T S D S+K+W +YR+ +L V S D + S S D +I
Sbjct: 117 LATASEDKSIKVWS-MYRQR---FLYSLYRHTHWVRCAKFSP--DGRLIVSCSEDKTIKI 170
Query: 208 WEKDKMSGGFNHGGFLQGHCFA-VLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAV 266
W+ N F FA + I S D T++VW ++ L
Sbjct: 171 WDTTNKQCVNN---FSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVR----VNKLLQH 223
Query: 267 LDGHRGPVRCLA 278
H G V C++
Sbjct: 224 YQVHSGGVNCIS 235
Score = 110 (43.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 49/211 (23%), Positives = 86/211 (40%)
Query: 98 YHAEG-LLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGS 156
+ A+G L T S DK++K W + +R + S H V + D + +CS D +
Sbjct: 110 FSADGQFLATASEDKSIKVWSMYRQRF--LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKT 167
Query: 157 VKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGG 216
+KIW ++ + + ++ F N + + + S SD ++ W+ +++
Sbjct: 168 IKIWDTTNKQCVNNFSDSVGF----ANFVDFNP--SGTCIASAGSDQTVKVWDV-RVNKL 220
Query: 217 FNHGGFLQGHCFAVLCLV--AIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPV 274
H Q H V C+ + + S D T+++ EG + L GH GPV
Sbjct: 221 LQH---YQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEG----RLIYTLQGHTGPV 273
Query: 275 RCLAASLEMEKVVMGFLVYSSSLDQTFKVWR 305
++ S G L S D +WR
Sbjct: 274 FTVSFSKG------GELFASGGADTQVLLWR 298
Score = 56 (24.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 20/75 (26%), Positives = 32/75 (42%)
Query: 4 TGSSSTRIRVWR-QPDCVERGFIKARHGEVRAILA---HDNMLFTTNKDCKIRIWNFTVS 59
T S T + +W +P R + H +V + H N+L + ++D +R+W
Sbjct: 35 TASWDTFLMLWNFKPHA--RAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKR 92
Query: 60 DNFRTKKVTTLPRRS 74
F K T P RS
Sbjct: 93 GKFSEFKAHTAPVRS 107
Score = 54 (24.1 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 26/99 (26%), Positives = 48/99 (48%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERG-F--IKARHGEVRAI--LAHDNMLFTTNKDCKIRIWN 55
++ + S +R+W PD +RG F KA VR++ A L T ++D I++W+
Sbjct: 74 LLASASRDRTVRLWI-PD--KRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWS 130
Query: 56 FTVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSC 94
+R + + +L R + ++ +K + R VSC
Sbjct: 131 M-----YRQRFLYSLYRHTHWVRCAKFSPDG--RLIVSC 162
>ASPGD|ASPL0000015866 [details] [associations]
symbol:AN8183 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003676 EMBL:BN001302 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0030529 OMA:VWQCDTP InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003
ProteinModelPortal:C8V743 EnsemblFungi:CADANIAT00004225
Uniprot:C8V743
Length = 851
Score = 152 (58.6 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 63/257 (24%), Positives = 105/257 (40%)
Query: 2 VFTGSSSTRIRVWR-QP-DCVERGFIKARHGEVRAIL--AHDNMLFTTNKDCKIRIWNFT 57
+ T S RVW P D E + VRA A ++T ++DC + W +
Sbjct: 166 LLTASKDLTARVWSLDPEDGFEPTTLSGHRQGVRAAFFSADQESIYTVSRDCALFRWEYV 225
Query: 58 VSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWR 117
+ T + PR + K QQ H V C AF+ A LL G F +
Sbjct: 226 SKKDPDTMEDVAEPR---WRIVKKDFFQQPHAT-VKCAAFHAASNLLVVG-FSNGLFGLY 280
Query: 118 VLDKRCTCVDSFVAHESNVNAIVVNQD-DGFVFTCSSDGSVKIWRRVYRENSHTLTMTLK 176
L + T + +SN++ + +N+ + F S G + +W ++ S+ L +
Sbjct: 281 ELPEFNT-IHLLSISQSNIDVVSINKTGEWLAFGSSKFGQLLVWE--WQSESYILKQ--Q 335
Query: 177 FQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAI 236
S+NALA S D + + + DG I W+ + GF F + C +
Sbjct: 336 GHLDSMNALAYSP--DGQRIVTAADDGKIKVWD---VKSGFCLVTFTEHTSGVTACQFSK 390
Query: 237 E-KLIFSGSEDTTIRVW 252
+ ++F+ S D ++R W
Sbjct: 391 KGNVLFTSSLDGSVRAW 407
Score = 124 (48.7 bits), Expect = 0.00021, P = 0.00021
Identities = 46/153 (30%), Positives = 68/153 (44%)
Query: 85 QQQHRDCVSCMAFYHAEGL-LYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQ 143
QQ H D ++ +A Y +G + T + D +K W V K C+ +F H S V A ++
Sbjct: 334 QQGHLDSMNALA-YSPDGQRIVTAADDGKIKVWDV--KSGFCLVTFTEHTSGVTACQFSK 390
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
+FT S DGSV+ W + N T T + SS LA+ + +GS D
Sbjct: 391 KGNVLFTSSLDGSVRAWDLIRYRNFRTFTAPSRLSFSS---LAVDP--SGEVICAGSPDS 445
Query: 204 -SINFWEK------DKMSGGFNHGGFLQGHCFA 229
I+ W D++SG H G + FA
Sbjct: 446 FDIHVWSVQTGQLLDQLSG---HEGPVSALAFA 475
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 150 (57.9 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 55/197 (27%), Positives = 85/197 (43%)
Query: 86 QQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDD 145
+ H V +AF + L + S D T+K W + H V ++ + D
Sbjct: 1041 EDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQ--RTLEGHSQGVRSVTFSPDG 1098
Query: 146 GFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSI 205
+ + S DG++K+W + E TLT + V+++A S D L SG D +I
Sbjct: 1099 KLLASNSYDGTIKLWNPLTGELQQTLTG----RSDWVDSVAFSP--DGKQLASGYYDSTI 1152
Query: 206 NFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KLIFSGSEDTTIRVWRRAEGGCYHEC 263
W D +G L+GH + +V KL+ SGS D T ++W A G E
Sbjct: 1153 KLW--DSATGELLQT--LEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATG----EL 1204
Query: 264 LAVLDGHRGPVRCLAAS 280
L + +GH V +A S
Sbjct: 1205 LQIFEGHSKWVESVAFS 1221
Score = 145 (56.1 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 65/247 (26%), Positives = 102/247 (41%)
Query: 61 NFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLD 120
N+ + LP+ S ++ T + H V + F L +GS+D TVK W
Sbjct: 723 NYNLSGWSQLPKVEQTWS-AEQQTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPAT 781
Query: 121 KRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQS 180
+ + H V ++ + D + + S D ++ +W E L T +
Sbjct: 782 GEL--LQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGE----LLQTFEGHPH 835
Query: 181 SVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--- 237
S+ ++A + D L S S D +I W D +G L H +V VA
Sbjct: 836 SIWSVAFAP--DGKELASASDDSTIKIW--DLATGELQQT--LDSHSQSVRS-VAFSPDG 888
Query: 238 KLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSL 297
KL+ S S D+TI+VW A G E L+G G V+ +A S + +K+ G S
Sbjct: 889 KLLASSSLDSTIKVWNPATG----ELQQSLEGRSGWVKSVAFSPDGKKLASG------SE 938
Query: 298 DQTFKVW 304
T K+W
Sbjct: 939 KNTVKLW 945
Score = 143 (55.4 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 58/216 (26%), Positives = 92/216 (42%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQ 143
T + H V +AF L + S D T+K W +F H+ + A+ +
Sbjct: 955 TLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQ--QTFKGHDLWIRAVAFSP 1012
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
D + + S D ++K+W E L +L+ SV+A+A S D+ L S S D
Sbjct: 1013 DGKHLVSGSDDNTIKLWDLATSE----LQQSLEDHSRSVHAVAFSP--DDKQLASSSLDS 1066
Query: 204 SINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KLIFSGSEDTTIRVWRRAEGGCYH 261
+I W D +G L+GH V + KL+ S S D TI++W G
Sbjct: 1067 TIKLW--DSATGELQRT--LEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTG---- 1118
Query: 262 ECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSL 297
E L G V +A S + +++ G+ Y S++
Sbjct: 1119 ELQQTLTGRSDWVDSVAFSPDGKQLASGY--YDSTI 1152
Score = 138 (53.6 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 53/191 (27%), Positives = 80/191 (41%)
Query: 92 VSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTC 151
V +AF L +GS TVK W + + H +V ++ + D + +
Sbjct: 921 VKSVAFSPDGKKLASGSEKNTVKLWNPATGEL--LQTLEGHSQSVRSVAFSPDGKQLASS 978
Query: 152 SSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKD 211
SSD ++K+W E L T K + A+A S D L SGS D +I W D
Sbjct: 979 SSDTTIKLWNSTTGE----LQQTFKGHDLWIRAVAFSP--DGKHLVSGSDDNTIKLW--D 1030
Query: 212 KMSGGFNHGGFLQGHCFAV--LCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDG 269
+ L+ H +V + +K + S S D+TI++W A G E L+G
Sbjct: 1031 LATSELQQS--LEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATG----ELQRTLEG 1084
Query: 270 HRGPVRCLAAS 280
H VR + S
Sbjct: 1085 HSQGVRSVTFS 1095
Score = 51 (23.0 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 14/65 (21%), Positives = 30/65 (46%)
Query: 4 TGSSSTRIRVWRQPDCVERGFIKARHGEVRAI-LAHDN-MLFTTNKDCKIRIWNFTVSDN 61
+GS +++W ++ VR++ + D L +++ D I++WN T +
Sbjct: 935 SGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGEL 994
Query: 62 FRTKK 66
+T K
Sbjct: 995 QQTFK 999
Score = 42 (19.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 11/54 (20%), Positives = 25/54 (46%)
Query: 4 TGSSSTRIRVWRQPDCVERGFIKARHGEVRAI-LAHDNMLFTTNK-DCKIRIWN 55
+ S + I++W + + + VR++ + D L ++ D I++WN
Sbjct: 851 SASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWN 904
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 141 (54.7 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 49/171 (28%), Positives = 76/171 (44%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H+D V+C+ F + LL +GS DKTV+ W K + V F AH + V ++ D
Sbjct: 22 HKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSDGQS 79
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFF-DNYFLYSGSSDGSIN 206
T S D +VK+W +H Q +N + + F D + S S D ++
Sbjct: 80 FVTASDDKTVKVWA------THRQKFLFSLSQH-INWVRCAKFSPDGRLIVSASDDKTVK 132
Query: 207 FWEKDK---MSGGFNHGGFLQGHCF--AVLCLVAIEKLIFSGSEDTTIRVW 252
W+K + HGGF+ F + C+ A +G D T++VW
Sbjct: 133 LWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAA------AGM-DNTVKVW 176
Score = 133 (51.9 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 60/201 (29%), Positives = 83/201 (41%)
Query: 57 TVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAW 116
T SD+ +T KV R FL FS S QH + V C F L+ + S DKTVK W
Sbjct: 82 TASDD-KTVKVWAT-HRQKFL-FSLS----QHINWVRCAKFSPDGRLIVSASDDKTVKLW 134
Query: 117 RVLDKRCT-CVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTL 175
DK CV S+ H V + + + D +VK+W +H L
Sbjct: 135 ---DKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD----VRTHRLLQHY 187
Query: 176 KFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVA 235
+ ++VN L+ NY L + SSD ++ D M G + L GH VA
Sbjct: 188 QLHSAAVNGLSFHPS-GNY-LITASSDSTLKIL--DLMEGRLLYT--LHGHQ-GPATTVA 240
Query: 236 IEKL---IFSGSEDTTIRVWR 253
+ SG D + VW+
Sbjct: 241 FSRTGEYFASGGSDEQVMVWK 261
Score = 54 (24.1 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 14/56 (25%), Positives = 25/56 (44%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAI-LAHDNMLFTTNKDCK-IRIW 54
++ +GS +R+W E +A VR++ D F T D K +++W
Sbjct: 37 LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW 92
>ZFIN|ZDB-GENE-070112-2212 [details] [associations]
symbol:traf7 "TNF receptor-associated factor 7"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 Pfam:PF00097 Prosite:PS00518
ZFIN:ZDB-GENE-070112-2212 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 CTD:84231
HOGENOM:HOG000220840 HOVERGEN:HBG055270 KO:K10646 OMA:ALCIQGN
OrthoDB:EOG4BRWK8 EMBL:BX572621 EMBL:CR450851 EMBL:BC129220
IPI:IPI00488353 RefSeq:NP_001073654.1 UniGene:Dr.124692
Ensembl:ENSDART00000084579 Ensembl:ENSDART00000132703 GeneID:563746
KEGG:dre:563746 InParanoid:A1L1U9 NextBio:20885047 Uniprot:A1L1U9
Length = 639
Score = 150 (57.9 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 69/274 (25%), Positives = 113/274 (41%)
Query: 1 MVFTGSSSTRIRVWRQPDCVE-RGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVS 59
++F+GSS I+VW + + ++ G V A+ N L++ + DC I +W+
Sbjct: 379 LLFSGSSDKSIKVWDTCTTYKCQKTLEGHDGIVLALCIQGNKLYSGSADCTIIVWDIQTL 438
Query: 60 DNFRTKK-----VTTLPRRSSFLSFSKSNTQQQHRDCVSC---------------MAFYH 99
T + V TL + L FS S + D V A
Sbjct: 439 QKVNTIRAHDNPVCTLVSSHNML-FSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVA 497
Query: 100 AEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSS-DGSVK 158
++ LY+GS+ +T+K W + + CV +V +I V C + + +
Sbjct: 498 SQNHLYSGSY-QTIKIWDI--RSLECVHVLQTSGGSVYSIAVTNHH---IVCGTYENLIH 551
Query: 159 IWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFN 218
+W +E TLT + +V ALA+ S D ++S S D S+ W D M
Sbjct: 552 VWDIESKEQVRTLTGHV----GTVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQT 607
Query: 219 HGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVW 252
L H +V L +FSG+ D+T++VW
Sbjct: 608 ----LLRHQGSVTALAVSRGRLFSGAVDSTVKVW 637
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 135 (52.6 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 50/170 (29%), Positives = 74/170 (43%)
Query: 87 QHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDG 146
+H V C F L+ + S DKT+K W +K+C V++F N + N
Sbjct: 100 RHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC--VNNFSDSVGFANFVDFNPSGT 157
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
+ + SD +VK+W R N L + VN ++ NY L + SSDG++
Sbjct: 158 CIASAGSDQTVKVWD--VRVNK--LLQHYQVHSGGVNCISFHPS-GNY-LITASSDGTLK 211
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK---LIFSGSEDTTIRVWR 253
D + G + LQGH V V+ K L SG DT + +WR
Sbjct: 212 IL--DLLEGRLIYT--LQGHTGPVFT-VSFSKGGELFASGGADTQVLLWR 256
Score = 128 (50.1 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 52/192 (27%), Positives = 79/192 (41%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H+D V+ + F LL + S D+TV+ W + DKR F AH + V ++ + D F
Sbjct: 17 HKDVVTSVQFSPHGNLLASASRDRTVRLW-IPDKRGK-FSEFKAHTAPVRSVDFSADGQF 74
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ T S D S+K+W +YR+ +L V S D + S S D +I
Sbjct: 75 LATASEDKSIKVWS-MYRQR---FLYSLYRHTHWVRCAKFSP--DGRLIVSCSEDKTIKI 128
Query: 208 WEKDKMSGGFNHGGFLQGHCFA-VLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAV 266
W+ N F FA + I S D T++VW ++ L
Sbjct: 129 WDTTNKQCVNN---FSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVR----VNKLLQH 181
Query: 267 LDGHRGPVRCLA 278
H G V C++
Sbjct: 182 YQVHSGGVNCIS 193
Score = 110 (43.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 49/211 (23%), Positives = 86/211 (40%)
Query: 98 YHAEG-LLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGS 156
+ A+G L T S DK++K W + +R + S H V + D + +CS D +
Sbjct: 68 FSADGQFLATASEDKSIKVWSMYRQRF--LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKT 125
Query: 157 VKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGG 216
+KIW ++ + + ++ F N + + + S SD ++ W+ +++
Sbjct: 126 IKIWDTTNKQCVNNFSDSVGF----ANFVDFNP--SGTCIASAGSDQTVKVWDV-RVNKL 178
Query: 217 FNHGGFLQGHCFAVLCLV--AIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPV 274
H Q H V C+ + + S D T+++ EG + L GH GPV
Sbjct: 179 LQH---YQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEG----RLIYTLQGHTGPV 231
Query: 275 RCLAASLEMEKVVMGFLVYSSSLDQTFKVWR 305
++ S G L S D +WR
Sbjct: 232 FTVSFSKG------GELFASGGADTQVLLWR 256
Score = 54 (24.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 26/99 (26%), Positives = 48/99 (48%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERG-F--IKARHGEVRAI--LAHDNMLFTTNKDCKIRIWN 55
++ + S +R+W PD +RG F KA VR++ A L T ++D I++W+
Sbjct: 32 LLASASRDRTVRLWI-PD--KRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWS 88
Query: 56 FTVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSC 94
+R + + +L R + ++ +K + R VSC
Sbjct: 89 M-----YRQRFLYSLYRHTHWVRCAKFSPDG--RLIVSC 120
Score = 53 (23.7 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 38 HDNMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRS 74
H N+L + ++D +R+W F K T P RS
Sbjct: 29 HGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRS 65
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 149 (57.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 53/207 (25%), Positives = 92/207 (44%)
Query: 101 EGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW 160
+ ++ +GS D+T+K W + C+ + H S V + +++ V + S D ++++W
Sbjct: 311 DNIIISGSTDRTLKVWNA--ETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVW 366
Query: 161 RRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHG 220
+ H L V A+ + D + SG+ D + W+ + + H
Sbjct: 367 DIETGQCLHVL-------MGHVAAVRCVQY-DGRRVVSGAYDFMVKVWDPETET--CLHT 416
Query: 221 GFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAAS 280
LQGH V L + SGS DT+IRVW G C H L GH+ L +
Sbjct: 417 --LQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIH----TLTGHQS----LTSG 466
Query: 281 LEMEKVVMGFLVYSSSLDQTFKVWRVK 307
+E++ ++ S + D T K+W +K
Sbjct: 467 MELKDNIL----VSGNADSTVKIWDIK 489
Score = 143 (55.4 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 49/153 (32%), Positives = 67/153 (43%)
Query: 152 SSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKD 211
S D ++K+W V + TL + S DN + SGS+D ++ W +
Sbjct: 278 SDDNTLKVWSAVTGKCLRTLV-------GHTGGVWSSQMRDNIII-SGSTDRTLKVWNAE 329
Query: 212 KMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHR 271
+G H L GH V C+ EK + SGS D T+RVW G C H VL GH
Sbjct: 330 --TGECIHT--LYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLH----VLMGHV 381
Query: 272 GPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
VRC+ + +VV G + D KVW
Sbjct: 382 AAVRCV--QYDGRRVVSG------AYDFMVKVW 406
Score = 136 (52.9 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 69/297 (23%), Positives = 122/297 (41%)
Query: 2 VFTGSSSTRIRVWRQPD--CVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVS 59
+ +GS ++VW C+ + G V + DN++ + + D +++WN
Sbjct: 274 IVSGSDDNTLKVWSAVTGKCLRT--LVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETG 331
Query: 60 DNFRT---------------KKVTTLPRRSSFLSFSKSNTQQQH--RDCVSCMAFYHAEG 102
+ T K+V + R ++ + Q H V+ + +G
Sbjct: 332 ECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDG 391
Query: 103 L-LYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF-VFTCSSDGSVKIW 160
+ +G++D VK W + TC+ + H + V ++ Q DG V + S D S+++W
Sbjct: 392 RRVVSGAYDFMVKVWDPETE--TCLHTLQGHTNRVYSL---QFDGIHVVSGSLDTSIRVW 446
Query: 161 RRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHG 220
HTLT QS + + L DN L SG++D ++ W D +G
Sbjct: 447 DVETGNCIHTLTG----HQSLTSGMELK---DN-ILVSGNADSTVKIW--DIKTGQCLQT 496
Query: 221 GFLQG---HCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPV 274
LQG H AV CL + + + S+D T+++W G + + G G V
Sbjct: 497 --LQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGV 551
Score = 114 (45.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 37/120 (30%), Positives = 57/120 (47%)
Query: 191 FDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIR 250
FD + SGS D SI W+ + +G H L GH + + ++ SG+ D+T++
Sbjct: 429 FDGIHVVSGSLDTSIRVWDVE--TGNCIHT--LTGHQSLTSGMELKDNILVSGNADSTVK 484
Query: 251 VWRRAEGGCYHECLAVLDG---HRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
+W G +CL L G H+ V CL + K F++ SS D T K+W +K
Sbjct: 485 IWDIKTG----QCLQTLQGPNKHQSAVTCL----QFNK---NFVITSSD-DGTVKLWDLK 532
Score = 63 (27.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 11/57 (19%), Positives = 29/57 (50%)
Query: 1 MVFTGSSSTRIRVWRQP--DCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWN 55
++ +GS+ ++VW +C+ + VR + H+ + + ++D +R+W+
Sbjct: 313 IIISGSTDRTLKVWNAETGECIHT--LYGHTSTVRCMHLHEKRVVSGSRDATLRVWD 367
>UNIPROTKB|E1C9D6 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:AADN02061119 IPI:IPI00578429 RefSeq:XP_425517.3
ProteinModelPortal:E1C9D6 PRIDE:E1C9D6 Ensembl:ENSGALT00000023410
GeneID:427945 KEGG:gga:427945 Uniprot:E1C9D6
Length = 340
Score = 131 (51.2 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 44/165 (26%), Positives = 76/165 (46%)
Query: 90 DCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVF 149
DC+S +A L +G+ D T K W V + TC +F HES++NAI + +
Sbjct: 186 DCMS-LAVSPDFKLFISGACDATAKLWDV--REGTCRQTFSGHESDINAICFFPNGEAIC 242
Query: 150 TCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWE 209
T S D + +++ R + + + + + ++A S L +G D + N W+
Sbjct: 243 TGSDDATCRLFD--LRADQELIVYSHESIICGITSVAFSR--SGRLLLAGYDDFNCNIWD 298
Query: 210 KDKMSGGFNHGGFLQGHCFAVLCL-VAIEKL-IFSGSEDTTIRVW 252
K G L GH V CL V + + + +GS D+ +++W
Sbjct: 299 SLKAE----RVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIW 339
Score = 110 (43.8 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 40/179 (22%), Positives = 74/179 (41%)
Query: 129 FVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALS 188
F+ H + ++ V+ D + + D + K+W RE T T +S +NA+
Sbjct: 180 FLGHTGDCMSLAVSPDFKLFISGACDATAKLWD--VREG--TCRQTFSGHESDINAIC-- 233
Query: 189 SFFDN-YFLYSGSSDGSINFWE--KDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSE 245
FF N + +GS D + ++ D+ ++H + G + +L+ +G +
Sbjct: 234 -FFPNGEAICTGSDDATCRLFDLRADQELIVYSHESIICG--ITSVAFSRSGRLLLAGYD 290
Query: 246 DTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
D +W + E + +L GH V CL + + G V + S D K+W
Sbjct: 291 DFNCNIWDSLKA----ERVGILSGHDNRVSCLGVTAD------GMAVATGSWDSFLKIW 339
Score = 54 (24.1 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 41 MLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFL 77
+L + ++D K+ +W D + T KV +P RSS++
Sbjct: 69 LLVSASQDGKLIVW-----DTYTTNKVHAIPLRSSWV 100
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 149 (57.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 53/207 (25%), Positives = 92/207 (44%)
Query: 101 EGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW 160
+ ++ +GS D+T+K W + C+ + H S V + +++ V + S D ++++W
Sbjct: 351 DNIIISGSTDRTLKVWNA--ETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVW 406
Query: 161 RRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHG 220
+ H L V A+ + D + SG+ D + W+ + + H
Sbjct: 407 DIETGQCLHVL-------MGHVAAVRCVQY-DGRRVVSGAYDFMVKVWDPETET--CLHT 456
Query: 221 GFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAAS 280
LQGH V L + SGS DT+IRVW G C H L GH+ L +
Sbjct: 457 --LQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIH----TLTGHQS----LTSG 506
Query: 281 LEMEKVVMGFLVYSSSLDQTFKVWRVK 307
+E++ ++ S + D T K+W +K
Sbjct: 507 MELKDNIL----VSGNADSTVKIWDIK 529
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 49/153 (32%), Positives = 67/153 (43%)
Query: 152 SSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKD 211
S D ++K+W V + TL + S DN + SGS+D ++ W +
Sbjct: 318 SDDNTLKVWSAVTGKCLRTLV-------GHTGGVWSSQMRDNIII-SGSTDRTLKVWNAE 369
Query: 212 KMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHR 271
+G H L GH V C+ EK + SGS D T+RVW G C H VL GH
Sbjct: 370 --TGECIHT--LYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLH----VLMGHV 421
Query: 272 GPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
VRC+ + +VV G + D KVW
Sbjct: 422 AAVRCV--QYDGRRVVSG------AYDFMVKVW 446
Score = 136 (52.9 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 69/297 (23%), Positives = 122/297 (41%)
Query: 2 VFTGSSSTRIRVWRQPD--CVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVS 59
+ +GS ++VW C+ + G V + DN++ + + D +++WN
Sbjct: 314 IVSGSDDNTLKVWSAVTGKCLRT--LVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETG 371
Query: 60 DNFRT---------------KKVTTLPRRSSFLSFSKSNTQQQH--RDCVSCMAFYHAEG 102
+ T K+V + R ++ + Q H V+ + +G
Sbjct: 372 ECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDG 431
Query: 103 L-LYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF-VFTCSSDGSVKIW 160
+ +G++D VK W + TC+ + H + V ++ Q DG V + S D S+++W
Sbjct: 432 RRVVSGAYDFMVKVWDPETE--TCLHTLQGHTNRVYSL---QFDGIHVVSGSLDTSIRVW 486
Query: 161 RRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHG 220
HTLT QS + + L DN L SG++D ++ W D +G
Sbjct: 487 DVETGNCIHTLTG----HQSLTSGMELK---DN-ILVSGNADSTVKIW--DIKTGQCLQT 536
Query: 221 GFLQG---HCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPV 274
LQG H AV CL + + + S+D T+++W G + + G G V
Sbjct: 537 --LQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGV 591
Score = 114 (45.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 37/120 (30%), Positives = 57/120 (47%)
Query: 191 FDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIR 250
FD + SGS D SI W+ + +G H L GH + + ++ SG+ D+T++
Sbjct: 469 FDGIHVVSGSLDTSIRVWDVE--TGNCIHT--LTGHQSLTSGMELKDNILVSGNADSTVK 524
Query: 251 VWRRAEGGCYHECLAVLDG---HRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
+W G +CL L G H+ V CL + K F++ SS D T K+W +K
Sbjct: 525 IWDIKTG----QCLQTLQGPNKHQSAVTCL----QFNK---NFVITSSD-DGTVKLWDLK 572
Score = 63 (27.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 11/57 (19%), Positives = 29/57 (50%)
Query: 1 MVFTGSSSTRIRVWRQP--DCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWN 55
++ +GS+ ++VW +C+ + VR + H+ + + ++D +R+W+
Sbjct: 353 IIISGSTDRTLKVWNAETGECIHT--LYGHTSTVRCMHLHEKRVVSGSRDATLRVWD 407
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 149 (57.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 53/207 (25%), Positives = 92/207 (44%)
Query: 101 EGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW 160
+ ++ +GS D+T+K W + C+ + H S V + +++ V + S D ++++W
Sbjct: 353 DNIIISGSTDRTLKVWNA--ETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVW 408
Query: 161 RRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHG 220
+ H L V A+ + D + SG+ D + W+ + + H
Sbjct: 409 DIETGQCLHVL-------MGHVAAVRCVQY-DGRRVVSGAYDFMVKVWDPETET--CLHT 458
Query: 221 GFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAAS 280
LQGH V L + SGS DT+IRVW G C H L GH+ L +
Sbjct: 459 --LQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIH----TLTGHQS----LTSG 508
Query: 281 LEMEKVVMGFLVYSSSLDQTFKVWRVK 307
+E++ ++ S + D T K+W +K
Sbjct: 509 MELKDNIL----VSGNADSTVKIWDIK 531
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 49/153 (32%), Positives = 67/153 (43%)
Query: 152 SSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKD 211
S D ++K+W V + TL + S DN + SGS+D ++ W +
Sbjct: 320 SDDNTLKVWSAVTGKCLRTLV-------GHTGGVWSSQMRDNIII-SGSTDRTLKVWNAE 371
Query: 212 KMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHR 271
+G H L GH V C+ EK + SGS D T+RVW G C H VL GH
Sbjct: 372 --TGECIHT--LYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLH----VLMGHV 423
Query: 272 GPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
VRC+ + +VV G + D KVW
Sbjct: 424 AAVRCV--QYDGRRVVSG------AYDFMVKVW 448
Score = 136 (52.9 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 69/297 (23%), Positives = 122/297 (41%)
Query: 2 VFTGSSSTRIRVWRQPD--CVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVS 59
+ +GS ++VW C+ + G V + DN++ + + D +++WN
Sbjct: 316 IVSGSDDNTLKVWSAVTGKCLRT--LVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETG 373
Query: 60 DNFRT---------------KKVTTLPRRSSFLSFSKSNTQQQH--RDCVSCMAFYHAEG 102
+ T K+V + R ++ + Q H V+ + +G
Sbjct: 374 ECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDG 433
Query: 103 L-LYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF-VFTCSSDGSVKIW 160
+ +G++D VK W + TC+ + H + V ++ Q DG V + S D S+++W
Sbjct: 434 RRVVSGAYDFMVKVWDPETE--TCLHTLQGHTNRVYSL---QFDGIHVVSGSLDTSIRVW 488
Query: 161 RRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHG 220
HTLT QS + + L DN L SG++D ++ W D +G
Sbjct: 489 DVETGNCIHTLTG----HQSLTSGMELK---DN-ILVSGNADSTVKIW--DIKTGQCLQT 538
Query: 221 GFLQG---HCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPV 274
LQG H AV CL + + + S+D T+++W G + + G G V
Sbjct: 539 --LQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGV 593
Score = 114 (45.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 37/120 (30%), Positives = 57/120 (47%)
Query: 191 FDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIR 250
FD + SGS D SI W+ + +G H L GH + + ++ SG+ D+T++
Sbjct: 471 FDGIHVVSGSLDTSIRVWDVE--TGNCIHT--LTGHQSLTSGMELKDNILVSGNADSTVK 526
Query: 251 VWRRAEGGCYHECLAVLDG---HRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
+W G +CL L G H+ V CL + K F++ SS D T K+W +K
Sbjct: 527 IWDIKTG----QCLQTLQGPSKHQSAVTCL----QFNK---NFVITSSD-DGTVKLWDLK 574
Score = 63 (27.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 11/57 (19%), Positives = 29/57 (50%)
Query: 1 MVFTGSSSTRIRVWRQP--DCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWN 55
++ +GS+ ++VW +C+ + VR + H+ + + ++D +R+W+
Sbjct: 355 IIISGSTDRTLKVWNAETGECIHT--LYGHTSTVRCMHLHEKRVVSGSRDATLRVWD 409
>UNIPROTKB|I3LQS7 [details] [associations]
symbol:RRP9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00550000075093
OMA:AAKDCTI EMBL:FP102591 Ensembl:ENSSSCT00000032341 Uniprot:I3LQS7
Length = 478
Score = 147 (56.8 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 48/179 (26%), Positives = 81/179 (45%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
HRD VS +AF LY+ S D++VK W V + + V++ H+ V A+ +
Sbjct: 243 HRDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAEN--SYVETLFGHQDAVAALDALSRECC 300
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
V DG+V++W+ E S + Q S++++ L + + SG+ DGS+
Sbjct: 301 VTAGGRDGTVRVWK--IPEESQ---LVFYGHQGSIDSIQL---INEEHMVSGADDGSVAL 352
Query: 208 WEKDKMSG----GFNHG-----GFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEG 257
W K HG G Q + + + LI +GS + ++R+W+ EG
Sbjct: 353 WGLSKKRPLALQREAHGLRGEQGLEQPFWVSSVAALLNTDLIATGSHNNSVRLWQCGEG 411
Score = 138 (53.6 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 56/219 (25%), Positives = 94/219 (42%)
Query: 35 ILAHDNMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSC 94
I D +F+ KDC I W+ V +K+ +PR H + C
Sbjct: 157 ITPDDLAIFSAAKDCTIIKWS--VESG---RKLHVIPRAKK----GAEGQPPGHSSHILC 207
Query: 95 MAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSD 154
MA L +G K + W + C + +F H V+ + + +++ S D
Sbjct: 208 MAISSDGKYLASGDRSKLILIWEA--QSCRHLYTFTGHRDAVSGLAFRRGTHQLYSTSHD 265
Query: 155 GSVKIWRRVYRENSHTLTMTLKFQQSSVNAL-ALSSFFDNYFLYSGSSDGSINFWEKDKM 213
SVK+W ENS+ TL Q +V AL ALS + +G DG++ W+ +
Sbjct: 266 RSVKVWN--VAENSYV--ETLFGHQDAVAALDALSR---ECCVTAGGRDGTVRVWKIPEE 318
Query: 214 SGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVW 252
S +G QG ++ L+ E ++ SG++D ++ +W
Sbjct: 319 SQLVFYGH--QGSIDSIQ-LINEEHMV-SGADDGSVALW 353
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 141 (54.7 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 49/171 (28%), Positives = 76/171 (44%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H+D V+C+ F + LL +GS DKTV+ W K + V F AH + V ++ D
Sbjct: 60 HKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSDGQS 117
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFF-DNYFLYSGSSDGSIN 206
T S D +VK+W +H Q +N + + F D + S S D ++
Sbjct: 118 FVTASDDKTVKVWA------THRQKFLFSLSQH-INWVRCAKFSPDGRLIVSASDDKTVK 170
Query: 207 FWEKDK---MSGGFNHGGFLQGHCF--AVLCLVAIEKLIFSGSEDTTIRVW 252
W+K + HGGF+ F + C+ A +G D T++VW
Sbjct: 171 LWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAA------AGM-DNTVKVW 214
Score = 133 (51.9 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 60/201 (29%), Positives = 83/201 (41%)
Query: 57 TVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAW 116
T SD+ +T KV R FL FS S QH + V C F L+ + S DKTVK W
Sbjct: 120 TASDD-KTVKVWAT-HRQKFL-FSLS----QHINWVRCAKFSPDGRLIVSASDDKTVKLW 172
Query: 117 RVLDKRCT-CVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTL 175
DK CV S+ H V + + + D +VK+W +H L
Sbjct: 173 ---DKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD----VRTHRLLQHY 225
Query: 176 KFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVA 235
+ ++VN L+ NY L + SSD ++ D M G + L GH VA
Sbjct: 226 QLHSAAVNGLSFHPS-GNY-LITASSDSTLKIL--DLMEGRLLYT--LHGHQ-GPATTVA 278
Query: 236 IEKL---IFSGSEDTTIRVWR 253
+ SG D + VW+
Sbjct: 279 FSRTGEYFASGGSDEQVMVWK 299
Score = 54 (24.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 14/56 (25%), Positives = 25/56 (44%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAI-LAHDNMLFTTNKDCK-IRIW 54
++ +GS +R+W E +A VR++ D F T D K +++W
Sbjct: 75 LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW 130
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 147 (56.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 48/213 (22%), Positives = 93/213 (43%)
Query: 103 LLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIV-VNQDDGFVFTCSSDGSVKIWR 161
L+ TGS DKTV+ W K C V + H ++ A+ + F + S D ++K+W
Sbjct: 418 LIVTGSKDKTVRLWNATSKSCIGVGT--GHNGDILAVAFAKKSFSFFVSGSGDRTLKVWS 475
Query: 162 R--VYRENSHTLTMTLKF----QQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSG 215
+ ++ + + + +N++A++ ++ + +GS D + + W +
Sbjct: 476 LDGISEDSEEPINLKTRSVVAAHDKDINSVAVAR--NDSLVCTGSEDRTASIWRLPDLV- 532
Query: 216 GFNHGGFLQGHCFAVLCLV--AIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGP 273
H L+GH + + +++ + + S D T+++W ++G C L +GH
Sbjct: 533 ---HVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSC----LKTFEGHTSS 585
Query: 274 VRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRV 306
V L AS + G S D K+W V
Sbjct: 586 V--LRASF----ITDGTQFVSCGADGLLKLWNV 612
Score = 136 (52.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 42/193 (21%), Positives = 87/193 (45%)
Query: 118 VLDKRCTCVDSFVAHESN-VNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLK 176
++D + V S + ES+ + A+ ++ DD +F+ +++W + TL
Sbjct: 44 IVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVW------DLETLKCIRS 97
Query: 177 FQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGF-NHGGFLQGHCFAVLCLV- 234
++ + ++ L + +D + W+ D GGF H + +GH V ++
Sbjct: 98 WKGHEGPVMGMACHASGGLLATAGADRKVLVWDVD---GGFCTH--YFRGHKGVVSSILF 152
Query: 235 ---AIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFL 291
+ + ++ SGS+D T+RVW +CLA+++ H V +A S + G
Sbjct: 153 HPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSED------GLT 206
Query: 292 VYSSSLDQTFKVW 304
++S+ D+ +W
Sbjct: 207 LFSAGRDKVVNLW 219
Score = 128 (50.1 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 54/216 (25%), Positives = 92/216 (42%)
Query: 4 TGSSSTRIRVWRQPDCVERGFIKARHGEVRAILA-HD---NMLFTTNKDCKIRIWNFTVS 59
+GS ++VW D + + + + R+++A HD N + D + T S
Sbjct: 464 SGSGDRTLKVWSL-DGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLV----CTGS 518
Query: 60 DNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVL 119
++ RT + LP + T + H+ + + F + + T S DKTVK W +
Sbjct: 519 ED-RTASIWRLPDLVHVV------TLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAIS 571
Query: 120 DKRCTCVDSFVAHESNV-NAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQ 178
D +C+ +F H S+V A + FV +C +DG +K+W N+ T
Sbjct: 572 DG--SCLKTFEGHTSSVLRASFITDGTQFV-SCGADGLLKLWN----VNTSECIATYDQH 624
Query: 179 QSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMS 214
+ V ALA+ + + +G D IN W S
Sbjct: 625 EDKVWALAVGKKTE--MIATGGGDAVINLWHDSTAS 658
Score = 121 (47.7 bits), Expect = 0.00046, P = 0.00046
Identities = 49/214 (22%), Positives = 92/214 (42%)
Query: 1 MVFTGSSSTRIRVWR--QPDCVERGFIKARHGEVRAI-LAHDNMLF--TTNKDCKIRIWN 55
++ TGS +R+W C+ G +G++ A+ A + F + + D +++W+
Sbjct: 418 LIVTGSKDKTVRLWNATSKSCIGVG--TGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWS 475
Query: 56 FT-VSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVK 114
+S++ +++ L RS + K ++ +A + L+ TGS D+T
Sbjct: 476 LDGISED--SEEPINLKTRSVVAAHDKD---------INSVAVARNDSLVCTGSEDRTAS 524
Query: 115 AWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMT 174
WR+ D V + H+ + ++ + D V T S D +VKIW + S T
Sbjct: 525 IWRLPD--LVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIW--AISDGSCLKT-- 578
Query: 175 LKFQQSSVNALALSSFFDNYFLYSGSSDGSINFW 208
F+ + + L S D S +DG + W
Sbjct: 579 --FEGHTSSVLRASFITDGTQFVSCGADGLLKLW 610
Score = 120 (47.3 bits), Expect = 0.00059, P = 0.00059
Identities = 44/215 (20%), Positives = 86/215 (40%)
Query: 80 SKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAI 139
S +T + D ++ +A + LL++ + ++ W + + C+ S+ HE V +
Sbjct: 51 SVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDL--ETLKCIRSWKGHEGPVMGM 108
Query: 140 VVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSG 199
+ G + T +D V +W + T + + V+++ + L SG
Sbjct: 109 ACHASGGLLATAGADRKVLVWD----VDGGFCTHYFRGHKGVVSSILFHPDSNKNILISG 164
Query: 200 SSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK--LIFSGSEDTTIRVWRRAEG 257
S D ++ W+ + + ++ H AV + E +FS D + +W +
Sbjct: 165 SDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDY 224
Query: 258 GCY-----HECL-AVLDGHRG-PVRCLAASLEMEK 285
C +E L AV G P ASL+ +K
Sbjct: 225 SCKATVATYEVLEAVTTVSSGTPFASFVASLDQKK 259
Score = 115 (45.5 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 51/213 (23%), Positives = 90/213 (42%)
Query: 88 HRDCVSCMAFYHAE-GLLYTGSFDKTVKAWR---VLDKRCTCVD----SFVA-HESNVNA 138
H + +AF +GS D+T+K W + + ++ S VA H+ ++N+
Sbjct: 445 HNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINS 504
Query: 139 IVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYS 198
+ V ++D V T S D + IWR + H +T LK + + ++ S+ + + +
Sbjct: 505 VAVARNDSLVCTGSEDRTASIWR--LPDLVHVVT--LKGHKRRIFSVEFSTV--DQCVMT 558
Query: 199 GSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVL--CLVAIEKLIFSGSEDTTIRVWRRAE 256
S D ++ W +S G F +GH +VL + S D +++W
Sbjct: 559 ASGDKTVKIWA---ISDGSCLKTF-EGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNT 614
Query: 257 GGCYHECLAVLDGHRGPVRCLAASLEMEKVVMG 289
EC+A D H V LA + E + G
Sbjct: 615 S----ECIATYDQHEDKVWALAVGKKTEMIATG 643
Score = 48 (22.0 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 24 FIKARHGEV-----RAILAHDNMLFTT-NKDCKIRIWNFT 57
++ A H EV + + N+L T +KD +R+WN T
Sbjct: 395 YVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNAT 434
Score = 43 (20.2 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 34 AILAHDNMLFTTNKDCKIRIWNFTVSDNFRTKK 66
A+ D +LF+ +IR+W+ R+ K
Sbjct: 67 ALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWK 99
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 149 (57.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 53/207 (25%), Positives = 92/207 (44%)
Query: 101 EGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW 160
+ ++ +GS D+T+K W + C+ + H S V + +++ V + S D ++++W
Sbjct: 431 DNIIISGSTDRTLKVWNA--ETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVW 486
Query: 161 RRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHG 220
+ H L V A+ + D + SG+ D + W+ + + H
Sbjct: 487 DIETGQCLHVL-------MGHVAAVRCVQY-DGRRVVSGAYDFMVKVWDPETET--CLHT 536
Query: 221 GFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAAS 280
LQGH V L + SGS DT+IRVW G C H L GH+ L +
Sbjct: 537 --LQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIH----TLTGHQS----LTSG 586
Query: 281 LEMEKVVMGFLVYSSSLDQTFKVWRVK 307
+E++ ++ S + D T K+W +K
Sbjct: 587 MELKDNIL----VSGNADSTVKIWDIK 609
Score = 143 (55.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 49/153 (32%), Positives = 67/153 (43%)
Query: 152 SSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKD 211
S D ++K+W V + TL + S DN + SGS+D ++ W +
Sbjct: 398 SDDNTLKVWSAVTGKCLRTLV-------GHTGGVWSSQMRDNIII-SGSTDRTLKVWNAE 449
Query: 212 KMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHR 271
+G H L GH V C+ EK + SGS D T+RVW G C H VL GH
Sbjct: 450 --TGECIHT--LYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLH----VLMGHV 501
Query: 272 GPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
VRC+ + +VV G + D KVW
Sbjct: 502 AAVRCV--QYDGRRVVSG------AYDFMVKVW 526
Score = 136 (52.9 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 69/297 (23%), Positives = 122/297 (41%)
Query: 2 VFTGSSSTRIRVWRQPD--CVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVS 59
+ +GS ++VW C+ + G V + DN++ + + D +++WN
Sbjct: 394 IVSGSDDNTLKVWSAVTGKCLRT--LVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETG 451
Query: 60 DNFRT---------------KKVTTLPRRSSFLSFSKSNTQQQH--RDCVSCMAFYHAEG 102
+ T K+V + R ++ + Q H V+ + +G
Sbjct: 452 ECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDG 511
Query: 103 L-LYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF-VFTCSSDGSVKIW 160
+ +G++D VK W + TC+ + H + V ++ Q DG V + S D S+++W
Sbjct: 512 RRVVSGAYDFMVKVWDPETE--TCLHTLQGHTNRVYSL---QFDGIHVVSGSLDTSIRVW 566
Query: 161 RRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHG 220
HTLT QS + + L DN L SG++D ++ W D +G
Sbjct: 567 DVETGNCIHTLTG----HQSLTSGMELK---DN-ILVSGNADSTVKIW--DIKTGQCLQT 616
Query: 221 GFLQG---HCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPV 274
LQG H AV CL + + + S+D T+++W G + + G G V
Sbjct: 617 --LQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGV 671
Score = 114 (45.2 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 37/120 (30%), Positives = 57/120 (47%)
Query: 191 FDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIR 250
FD + SGS D SI W+ + +G H L GH + + ++ SG+ D+T++
Sbjct: 549 FDGIHVVSGSLDTSIRVWDVE--TGNCIHT--LTGHQSLTSGMELKDNILVSGNADSTVK 604
Query: 251 VWRRAEGGCYHECLAVLDG---HRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
+W G +CL L G H+ V CL + K F++ SS D T K+W +K
Sbjct: 605 IWDIKTG----QCLQTLQGPNKHQSAVTCL----QFNK---NFVITSSD-DGTVKLWDLK 652
Score = 63 (27.2 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 11/57 (19%), Positives = 29/57 (50%)
Query: 1 MVFTGSSSTRIRVWRQP--DCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWN 55
++ +GS+ ++VW +C+ + VR + H+ + + ++D +R+W+
Sbjct: 433 IIISGSTDRTLKVWNAETGECIHT--LYGHTSTVRCMHLHEKRVVSGSRDATLRVWD 487
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 139 (54.0 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 55/196 (28%), Positives = 89/196 (45%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQ 143
T + H + V C+ F + +L TGS+D T+K W + + + HES + +
Sbjct: 344 TFKGHTNGVMCLQF--EDNILATGSYDTTIKIWDT--ETGEELRTLRGHESGIRCLQF-- 397
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
DD + + S D ++K+W +R T T + V L FD L SGS D
Sbjct: 398 DDTKLISGSMDRTIKVWN--WRTGECISTYT--GHRGGVIGL----HFDASILASGSVDK 449
Query: 204 SINFWE-KDKMSGGFNHGGFLQGHCFAVLCLVAIE---KLIFSGSEDTTIRVWRRAEGGC 259
++ W +DK + F+ L+GH V V ++ + +FS S+D T+R+W
Sbjct: 450 TVKIWNFEDKST--FS----LRGHTDWVNA-VRVDTSSRTVFSASDDCTVRLWDLDT--- 499
Query: 260 YHECLAVLDGHRGPVR 275
C+ GH G V+
Sbjct: 500 -KTCIRTFHGHVGQVQ 514
Score = 137 (53.3 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 44/151 (29%), Positives = 69/151 (45%)
Query: 160 WRRVYRENSHTLT------MTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKM 213
W+ VY++ T ++K + N + F DN L +GS D +I W+ +
Sbjct: 321 WKEVYKDRFKVGTNWKYGRCSIKTFKGHTNGVMCLQFEDN-ILATGSYDTTIKIWDTE-- 377
Query: 214 SGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGP 273
+G L+GH + CL + + SGS D TI+VW G EC++ GHRG
Sbjct: 378 TG--EELRTLRGHESGIRCLQFDDTKLISGSMDRTIKVWNWRTG----ECISTYTGHRGG 431
Query: 274 VRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
V L + ++ S S+D+T K+W
Sbjct: 432 V----IGLHFDASILA----SGSVDKTVKIW 454
Score = 122 (48.0 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 53/201 (26%), Positives = 83/201 (41%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H D V+ + + +++ S D TV+ W LD + TC+ +F H V +V + F
Sbjct: 467 HTDWVNAVRVDTSSRTVFSASDDCTVRLWD-LDTK-TCIRTFHGHVGQVQQVVPLPRE-F 523
Query: 148 VFT-----CSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDN------YFL 196
F C +D + S +M L+ + + A + FDN ++
Sbjct: 524 EFEEHDAECEND-DLSTTSGDADPPSIQASMGLEPNAAYSQSSAFGTSFDNGRAAPPRYM 582
Query: 197 YSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAE 256
+ + D +I WE +G F GH V L A I SG+ED I++W
Sbjct: 583 VTSALDSTIRLWETT--TGRCLRTFF--GHLEGVWALGADTLRIVSGAEDRMIKIWDPRT 638
Query: 257 GGCYHECLAVLDGHRGPVRCL 277
G +C GH GPV C+
Sbjct: 639 G----KCERTFTGHSGPVTCI 655
Score = 117 (46.2 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 45/165 (27%), Positives = 71/165 (43%)
Query: 14 WRQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSDNFRTKK-----VT 68
W+ C + F K V + DN+L T + D I+IW+ + RT + +
Sbjct: 335 WKYGRCSIKTF-KGHTNGVMCLQFEDNILATGSYDTTIKIWDTETGEELRTLRGHESGIR 393
Query: 69 TLP-RRSSFLSFSKSNTQQ----QHRDCVSCMAFY-------HAEG-LLYTGSFDKTVKA 115
L + +S S T + + +C+S + H + +L +GS DKTVK
Sbjct: 394 CLQFDDTKLISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHFDASILASGSVDKTVKI 453
Query: 116 WRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW 160
W DK S H VNA+ V+ VF+ S D +V++W
Sbjct: 454 WNFEDKSTF---SLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLW 495
Score = 72 (30.4 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 15/61 (24%), Positives = 27/61 (44%)
Query: 4 TGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSDNFR 63
TGS T I++W E ++ +R + D L + + D I++WN+ +
Sbjct: 364 TGSYDTTIKIWDTETGEELRTLRGHESGIRCLQFDDTKLISGSMDRTIKVWNWRTGECIS 423
Query: 64 T 64
T
Sbjct: 424 T 424
Score = 59 (25.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 24/106 (22%), Positives = 42/106 (39%)
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
++ T + D ++++W T L+ AL + D + SG+ D I
Sbjct: 581 YMVTSALDSTIRLWETTTGRCLRTFFGHLE------GVWALGA--DTLRIVSGAEDRMIK 632
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVW 252
W D +G GH V C+ + +GSED +R++
Sbjct: 633 IW--DPRTGKCERT--FTGHSGPVTCIGLGDSRFATGSEDCEVRMY 674
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 149 (57.5 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 53/207 (25%), Positives = 92/207 (44%)
Query: 101 EGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW 160
+ ++ +GS D+T+K W + C+ + H S V + +++ V + S D ++++W
Sbjct: 436 DNIIISGSTDRTLKVWNA--ETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVW 491
Query: 161 RRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHG 220
+ H L V A+ + D + SG+ D + W+ + + H
Sbjct: 492 DIETGQCLHVL-------MGHVAAVRCVQY-DGRRVVSGAYDFMVKVWDPETET--CLHT 541
Query: 221 GFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAAS 280
LQGH V L + SGS DT+IRVW G C H L GH+ L +
Sbjct: 542 --LQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIH----TLTGHQS----LTSG 591
Query: 281 LEMEKVVMGFLVYSSSLDQTFKVWRVK 307
+E++ ++ S + D T K+W +K
Sbjct: 592 MELKDNIL----VSGNADSTVKIWDIK 614
Score = 143 (55.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 49/153 (32%), Positives = 67/153 (43%)
Query: 152 SSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKD 211
S D ++K+W V + TL + S DN + SGS+D ++ W +
Sbjct: 403 SDDNTLKVWSAVTGKCLRTLV-------GHTGGVWSSQMRDNIII-SGSTDRTLKVWNAE 454
Query: 212 KMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHR 271
+G H L GH V C+ EK + SGS D T+RVW G C H VL GH
Sbjct: 455 --TGECIHT--LYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLH----VLMGHV 506
Query: 272 GPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
VRC+ + +VV G + D KVW
Sbjct: 507 AAVRCV--QYDGRRVVSG------AYDFMVKVW 531
Score = 136 (52.9 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 69/297 (23%), Positives = 122/297 (41%)
Query: 2 VFTGSSSTRIRVWRQPD--CVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVS 59
+ +GS ++VW C+ + G V + DN++ + + D +++WN
Sbjct: 399 IVSGSDDNTLKVWSAVTGKCLRT--LVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETG 456
Query: 60 DNFRT---------------KKVTTLPRRSSFLSFSKSNTQQQH--RDCVSCMAFYHAEG 102
+ T K+V + R ++ + Q H V+ + +G
Sbjct: 457 ECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDG 516
Query: 103 L-LYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF-VFTCSSDGSVKIW 160
+ +G++D VK W + TC+ + H + V ++ Q DG V + S D S+++W
Sbjct: 517 RRVVSGAYDFMVKVWDPETE--TCLHTLQGHTNRVYSL---QFDGIHVVSGSLDTSIRVW 571
Query: 161 RRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHG 220
HTLT QS + + L DN L SG++D ++ W D +G
Sbjct: 572 DVETGNCIHTLTG----HQSLTSGMELK---DN-ILVSGNADSTVKIW--DIKTGQCLQT 621
Query: 221 GFLQG---HCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPV 274
LQG H AV CL + + + S+D T+++W G + + G G V
Sbjct: 622 --LQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGV 676
Score = 114 (45.2 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 37/120 (30%), Positives = 57/120 (47%)
Query: 191 FDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIR 250
FD + SGS D SI W+ + +G H L GH + + ++ SG+ D+T++
Sbjct: 554 FDGIHVVSGSLDTSIRVWDVE--TGNCIHT--LTGHQSLTSGMELKDNILVSGNADSTVK 609
Query: 251 VWRRAEGGCYHECLAVLDG---HRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
+W G +CL L G H+ V CL + K F++ SS D T K+W +K
Sbjct: 610 IWDIKTG----QCLQTLQGPNKHQSAVTCL----QFNK---NFVITSSD-DGTVKLWDLK 657
Score = 63 (27.2 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 11/57 (19%), Positives = 29/57 (50%)
Query: 1 MVFTGSSSTRIRVWRQP--DCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWN 55
++ +GS+ ++VW +C+ + VR + H+ + + ++D +R+W+
Sbjct: 438 IIISGSTDRTLKVWNAETGECIHT--LYGHTSTVRCMHLHEKRVVSGSRDATLRVWD 492
>CGD|CAL0005039 [details] [associations]
symbol:orf19.3467 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0005039
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
EMBL:AACQ01000154 InterPro:IPR016453 PIRSF:PIRSF005567
RefSeq:XP_712507.1 RefSeq:XP_712537.1 ProteinModelPortal:Q59S73
STRING:Q59S73 GeneID:3645845 GeneID:3645870 KEGG:cal:CaO19.10971
KEGG:cal:CaO19.3467 Uniprot:Q59S73
Length = 939
Score = 139 (54.0 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 48/171 (28%), Positives = 73/171 (42%)
Query: 84 TQ-QQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVN 142
TQ + H D + +A + ++ + T S D T+K W D +F H+ V ++ N
Sbjct: 91 TQFEAHPDYIRSIAVHPSKPYILTSSDDLTIKLWN-WDHNWKLEQTFEGHQHYVMSVNFN 149
Query: 143 QDDGFVFTCSS-DGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSS 201
D F + D +VKIW + + TL + + VN + D +L + S
Sbjct: 150 PKDPNTFASACLDRTVKIWSLGSSQPNFTL---IAHEAKGVNYVDYYPQADKPYLITSSD 206
Query: 202 DGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVW 252
D +I W+ S G L FA+ +I SGSED TIR W
Sbjct: 207 DKTIKVWDYQTKSCVATLEGHLSNVSFAIFHPEL--PIIVSGSEDGTIRFW 255
Score = 57 (25.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 28 RHGEVRAILAH--DNMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLP-RRSSFLS 78
R V+ I H + + TT + KI IW++ + ++ +VT LP R F++
Sbjct: 12 RSDRVKGIDFHPTEPWILTTLYNGKIEIWSYATNSLVKSIQVTELPVRAGKFIA 65
Score = 42 (19.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 13/61 (21%), Positives = 26/61 (42%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRA--ILAHDNMLFTTNKDCKIRIWNFTVS 59
+ T + +I +W I+ VRA +A N + + D +IR++N+
Sbjct: 28 ILTTLYNGKIEIWSYATNSLVKSIQVTELPVRAGKFIARKNWIVVGSDDFQIRVYNYNTG 87
Query: 60 D 60
+
Sbjct: 88 E 88
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 149 (57.5 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 53/207 (25%), Positives = 92/207 (44%)
Query: 101 EGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW 160
+ ++ +GS D+T+K W + C+ + H S V + +++ V + S D ++++W
Sbjct: 484 DNIIISGSTDRTLKVWNA--ETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVW 539
Query: 161 RRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHG 220
+ H L V A+ + D + SG+ D + W+ + + H
Sbjct: 540 DIETGQCLHVL-------MGHVAAVRCVQY-DGRRVVSGAYDFMVKVWDPETET--CLHT 589
Query: 221 GFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAAS 280
LQGH V L + SGS DT+IRVW G C H L GH+ L +
Sbjct: 590 --LQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIH----TLTGHQS----LTSG 639
Query: 281 LEMEKVVMGFLVYSSSLDQTFKVWRVK 307
+E++ ++ S + D T K+W +K
Sbjct: 640 MELKDNIL----VSGNADSTVKIWDIK 662
Score = 143 (55.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 49/153 (32%), Positives = 67/153 (43%)
Query: 152 SSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKD 211
S D ++K+W V + TL + S DN + SGS+D ++ W +
Sbjct: 451 SDDNTLKVWSAVTGKCLRTLV-------GHTGGVWSSQMRDNIII-SGSTDRTLKVWNAE 502
Query: 212 KMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHR 271
+G H L GH V C+ EK + SGS D T+RVW G C H VL GH
Sbjct: 503 --TGECIHT--LYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLH----VLMGHV 554
Query: 272 GPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
VRC+ + +VV G + D KVW
Sbjct: 555 AAVRCV--QYDGRRVVSG------AYDFMVKVW 579
Score = 136 (52.9 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 69/297 (23%), Positives = 122/297 (41%)
Query: 2 VFTGSSSTRIRVWRQPD--CVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVS 59
+ +GS ++VW C+ + G V + DN++ + + D +++WN
Sbjct: 447 IVSGSDDNTLKVWSAVTGKCLRT--LVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETG 504
Query: 60 DNFRT---------------KKVTTLPRRSSFLSFSKSNTQQQH--RDCVSCMAFYHAEG 102
+ T K+V + R ++ + Q H V+ + +G
Sbjct: 505 ECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDG 564
Query: 103 L-LYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF-VFTCSSDGSVKIW 160
+ +G++D VK W + TC+ + H + V ++ Q DG V + S D S+++W
Sbjct: 565 RRVVSGAYDFMVKVWDPETE--TCLHTLQGHTNRVYSL---QFDGIHVVSGSLDTSIRVW 619
Query: 161 RRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHG 220
HTLT QS + + L DN L SG++D ++ W D +G
Sbjct: 620 DVETGNCIHTLTG----HQSLTSGMELK---DN-ILVSGNADSTVKIW--DIKTGQCLQT 669
Query: 221 GFLQG---HCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPV 274
LQG H AV CL + + + S+D T+++W G + + G G V
Sbjct: 670 --LQGPHKHQSAVTCLQFNKNFVITSSDDGTVKLWDLRTGEFIRNLVTLESGGSGGV 724
Score = 111 (44.1 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 36/120 (30%), Positives = 57/120 (47%)
Query: 191 FDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIR 250
FD + SGS D SI W+ + +G H L GH + + ++ SG+ D+T++
Sbjct: 602 FDGIHVVSGSLDTSIRVWDVE--TGNCIHT--LTGHQSLTSGMELKDNILVSGNADSTVK 657
Query: 251 VWRRAEGGCYHECLAVLDG---HRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
+W G +CL L G H+ V CL + K F++ SS D T K+W ++
Sbjct: 658 IWDIKTG----QCLQTLQGPHKHQSAVTCL----QFNK---NFVITSSD-DGTVKLWDLR 705
Score = 63 (27.2 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 11/57 (19%), Positives = 29/57 (50%)
Query: 1 MVFTGSSSTRIRVWRQP--DCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWN 55
++ +GS+ ++VW +C+ + VR + H+ + + ++D +R+W+
Sbjct: 486 IIISGSTDRTLKVWNAETGECIHT--LYGHTSTVRCMHLHEKRVVSGSRDATLRVWD 540
>UNIPROTKB|F1MRM3 [details] [associations]
symbol:RRP9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00550000075093
OMA:AAKDCTI EMBL:DAAA02054389 IPI:IPI00867384 UniGene:Bt.9939
ProteinModelPortal:F1MRM3 Ensembl:ENSBTAT00000000891 Uniprot:F1MRM3
Length = 475
Score = 146 (56.5 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 47/179 (26%), Positives = 81/179 (45%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
HRD VS +AF LY+ S D++VK W V + + V++ H+ V A+ +
Sbjct: 240 HRDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAEN--SYVETLFGHQDAVAALDALSRECC 297
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
V DG+V++W+ E S + Q S++++ L + + SG+ DGS+
Sbjct: 298 VTAGGRDGTVRVWK--IPEESQ---LVFYGHQGSIDSIQL---INEEHMVSGADDGSVAL 349
Query: 208 WEKDKMSG----GFNHG-----GFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEG 257
W K HG G Q + + + L+ +GS + ++R+W+ EG
Sbjct: 350 WGLSKKRPLALQREAHGLRGEPGLEQPFWVSSVAALLNTDLVATGSHNNSVRLWQCGEG 408
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 59/218 (27%), Positives = 98/218 (44%)
Query: 39 DNMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQ---HRDCVSCM 95
D +F+ KDC I W+ V +K+ +PR +K T+ Q H V CM
Sbjct: 158 DLAIFSAAKDCTIIKWS--VESG---RKLHVIPR-------AKKGTEGQPPGHSTHVLCM 205
Query: 96 AFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDG 155
A L +G K + W + C + +F H V+ + + +++ S D
Sbjct: 206 AISSDGKYLASGDRSKLILIWEA--QSCQHLYTFTGHRDAVSGLAFRRGTHQLYSTSHDR 263
Query: 156 SVKIWRRVYRENSHTLTMTLKFQQSSVNAL-ALSSFFDNYFLYSGSSDGSINFWEKDKMS 214
SVK+W ENS+ TL Q +V AL ALS + +G DG++ W+ + S
Sbjct: 264 SVKVWN--VAENSYV--ETLFGHQDAVAALDALSR---ECCVTAGGRDGTVRVWKIPEES 316
Query: 215 GGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVW 252
+G QG ++ L+ E ++ SG++D ++ +W
Sbjct: 317 QLVFYGH--QGSIDSIQ-LINEEHMV-SGADDGSVALW 350
>UNIPROTKB|Q12788 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0005057
"receptor signaling protein activity" evidence=TAS] [GO:0007199
"G-protein coupled receptor signaling pathway coupled to cGMP
nucleotide second messenger" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471112 GO:GO:0005057
GO:GO:0007199 EMBL:AC005606 GO:GO:0006364 GO:GO:0032040
EMBL:AC005363 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR EMBL:U02609 EMBL:AB209173 EMBL:BC010231
EMBL:BC014007 EMBL:BC035409 IPI:IPI00477971 PIR:A49367
RefSeq:NP_006444.2 UniGene:Hs.513267 ProteinModelPortal:Q12788
SMR:Q12788 IntAct:Q12788 MINT:MINT-1427903 STRING:Q12788
PhosphoSite:Q12788 DMDM:223634675 SWISS-2DPAGE:Q12788 PaxDb:Q12788
PRIDE:Q12788 Ensembl:ENST00000568546 GeneID:10607 KEGG:hsa:10607
UCSC:uc002cnu.1 GeneCards:GC16P002022 HGNC:HGNC:11587 HPA:HPA042562
MIM:605915 neXtProt:NX_Q12788 PharmGKB:PA36351 OMA:HHFRGSP
PhylomeDB:Q12788 GenomeRNAi:10607 NextBio:40288 ArrayExpress:Q12788
Bgee:Q12788 CleanEx:HS_TBL3 Genevestigator:Q12788
GermOnline:ENSG00000183751 Uniprot:Q12788
Length = 808
Score = 149 (57.5 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 52/204 (25%), Positives = 86/204 (42%)
Query: 11 IRVWR-----QPDCVERGFIKARH-GEVRAILAHDNMLFTTNKDCKIRIWNFTVSDNFRT 64
+R+WR Q CV +G G V ++ L T ++DC +++W + +
Sbjct: 400 VRIWRMNKAGQVMCVAQGSGHTHSVGTVCCSRLKESFLVTGSQDCTVKLWPLPKA--LLS 457
Query: 65 KKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCT 124
K T P L TQ+ H ++ +A + LL TGS D+T K W + +C
Sbjct: 458 KN--TAPDNGPIL-LQAQTTQRCHDKDINSVAIAPNDKLLATGSQDRTAKLWAL--PQCQ 512
Query: 125 CVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNA 184
+ F H + + + D + T S+DG++K+W + T + +SV
Sbjct: 513 LLGVFSGHRRGLWCVQFSPMDQVLATASADGTIKLWAL----QDFSCLKTFEGHDASVLK 568
Query: 185 LALSSFFDNYFLYSGSSDGSINFW 208
+A S L S SDG + W
Sbjct: 569 VAFVSRGTQ--LLSSGSDGLVKLW 590
Score = 129 (50.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 53/236 (22%), Positives = 101/236 (42%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDK--RCTCVDSFVAHESNVNAIVVNQ-D 144
H D V + + L + + D++V+ WR ++K + CV H +V + ++
Sbjct: 375 HTDIVLALDVFRKGWLFASCAKDQSVRIWR-MNKAGQVMCVAQGSGHTHSVGTVCCSRLK 433
Query: 145 DGFVFTCSSDGSVKIW--------RRVYRENSHTLTM---TLKFQQSSVNALALSSFFDN 193
+ F+ T S D +VK+W + +N L T + +N++A++ ++
Sbjct: 434 ESFLVTGSQDCTVKLWPLPKALLSKNTAPDNGPILLQAQTTQRCHDKDINSVAIAP--ND 491
Query: 194 YFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLV--AIEKLIFSGSEDTTIRV 251
L +GS D + W + G GH + C+ +++++ + S D TI++
Sbjct: 492 KLLATGSQDRTAKLWALPQCQ----LLGVFSGHRRGLWCVQFSPMDQVLATASADGTIKL 547
Query: 252 WRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
W + CL +GH V L++ V G + SS D K+W +K
Sbjct: 548 WALQD----FSCLKTFEGHDASV------LKVAFVSRGTQLLSSGSDGLVKLWTIK 593
Score = 120 (47.3 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 43/149 (28%), Positives = 68/149 (45%)
Query: 63 RTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKR 122
RT K+ LP+ FS HR + C+ F + +L T S D T+K W + D
Sbjct: 501 RTAKLWALPQCQLLGVFSG------HRRGLWCVQFSPMDQVLATASADGTIKLWALQD-- 552
Query: 123 CTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSV 182
+C+ +F H+++V + + + SDG VK+W + N TL + V
Sbjct: 553 FSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLW--TIKNNE--CVRTLDAHEDKV 608
Query: 183 NALALSSFFDNYFLYSGSSDGSINFWEKD 211
L S D++ L +G+SD + W KD
Sbjct: 609 WGLHCSRL-DDHAL-TGASDSRVILW-KD 634
Score = 111 (44.1 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 54/205 (26%), Positives = 92/205 (44%)
Query: 117 RVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVF-TCSSDGSVKIWRRVYRENSHTLTMTL 175
+V + + + H V A+ V + G++F +C+ D SV+IWR + +
Sbjct: 360 KVFELQTSACQILHGHTDIVLALDVFRK-GWLFASCAKDQSVRIWR-MNKAGQVMCVAQG 417
Query: 176 KFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFN---HGG--FLQGH---- 226
SV + S ++ FL +GS D ++ W K N G LQ
Sbjct: 418 SGHTHSVGTVCCSRLKES-FLVTGSQDCTVKLWPLPKALLSKNTAPDNGPILLQAQTTQR 476
Query: 227 CFAV-LCLVAI---EKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLE 282
C + VAI +KL+ +GS+D T ++W + C + L V GHR + C+ S
Sbjct: 477 CHDKDINSVAIAPNDKLLATGSQDRTAKLWALPQ--C--QLLGVFSGHRRGLWCVQFS-P 531
Query: 283 MEKVVMGFLVYSSSLDQTFKVWRVK 307
M++V+ ++S D T K+W ++
Sbjct: 532 MDQVLA-----TASADGTIKLWALQ 551
Score = 51 (23.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 14/59 (23%), Positives = 25/59 (42%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN----MLFTTNKDCKIRIWN 55
++ TG +RVW + G V + H + +LF++ D IR+W+
Sbjct: 123 LLATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSATDAAIRVWS 181
Score = 48 (22.0 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 15/69 (21%), Positives = 30/69 (43%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAIL--AHDNMLFTTNKDCKIRIWNFTV 58
++F+ ++ IRVW D + A + V ++ A + + ++ +D IW+
Sbjct: 167 LLFSSATDAAIRVWSLQDRSCLAVLTAHYSAVTSLAFSADGHTMLSSGRDKICIIWDLQS 226
Query: 59 SDNFRTKKV 67
RT V
Sbjct: 227 CQATRTVPV 235
>TAIR|locus:4515102561 [details] [associations]
symbol:AT1G21651 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF13639 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 EMBL:CP002684
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0008270 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016772 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q04724
EMBL:AY065404 EMBL:AY096502 EMBL:AK229742 IPI:IPI00517824
RefSeq:NP_001117325.1 UniGene:At.47967 ProteinModelPortal:Q8VZ06
SMR:Q8VZ06 PaxDb:Q8VZ06 PRIDE:Q8VZ06 EnsemblPlants:AT1G21651.1
GeneID:6241299 KEGG:ath:AT1G21651 TAIR:At1g21651 PhylomeDB:Q8VZ06
ProtClustDB:CLSN2708440 ArrayExpress:Q8VZ06 Genevestigator:Q8VZ06
Uniprot:Q8VZ06
Length = 811
Score = 149 (57.5 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 47/178 (26%), Positives = 84/178 (47%)
Query: 81 KSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIV 140
+S + H+D V+ +A G L++ S+D+T+ W + D + V +F H+ V A++
Sbjct: 516 RSKDMRGHQDSVTGLAV--GGGFLFSSSYDRTILIWSLKD--FSHVHTFKGHQDKVMALI 571
Query: 141 VNQDDGFVFTC-SSDGS--VKIWRRVYRENSHTLTMTLK---FQQSSVNALALSSFFDNY 194
+G C S DG + +W + L + ++ + ++ALA S +
Sbjct: 572 --HIEGTEPVCVSGDGGGGIFVWSTTFPLEEQPLRKWYEPKDWRYTGIHALAYSEYGH-- 627
Query: 195 FLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVW 252
+Y+GS D +I W G + GH V LV + +++SGS D T+R+W
Sbjct: 628 -VYTGSGDNTIKAWSLQ--DGSLLCT--MSGHKSVVSTLVVVNGVLYSGSWDGTVRLW 680
Score = 147 (56.8 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 48/154 (31%), Positives = 75/154 (48%)
Query: 98 YHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSV 157
Y G +YTGS D T+KAW + D C S H+S V+ +VV +G +++ S DG+V
Sbjct: 622 YSEYGHVYTGSGDNTIKAWSLQDGSLLCTMS--GHKSVVSTLVVV--NGVLYSGSWDGTV 677
Query: 158 KIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGF 217
++W +NS LT+ + V ++ LS D+ L + +G I W D +
Sbjct: 678 RLWS--LSDNS-LLTVLGEETPGIVRSI-LSLAADDQTLVAAYQNGDIQIWRDDTLMKSM 733
Query: 218 NHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRV 251
+Q A+L + K +F+G D TI V
Sbjct: 734 K----IQNG--AILSIAVNGKWLFTGGWDKTINV 761
Score = 140 (54.3 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 48/174 (27%), Positives = 86/174 (49%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESN--VNAIV- 140
T H+ VS + + G+LY+GS+D TV+ W + D V + E+ V +I+
Sbjct: 650 TMSGHKSVVSTLVVVN--GVLYSGSWDGTVRLWSLSDNSLLTV---LGEETPGIVRSILS 704
Query: 141 VNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGS 200
+ DD + +G ++IWR TL ++K Q ++ ++A++ +L++G
Sbjct: 705 LAADDQTLVAAYQNGDIQIWR------DDTLMKSMKIQNGAILSIAVNG----KWLFTGG 754
Query: 201 SDGSINFWEK--DKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVW 252
D +IN E D++S H G + G + L+ E +F+G D TI+V+
Sbjct: 755 WDKTINVQELSGDEISVNCAHVGSIPGSS-VITSLLYWEGKLFAGFADKTIKVY 807
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 134 (52.2 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 50/170 (29%), Positives = 74/170 (43%)
Query: 87 QHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDG 146
+H V C F L+ + S DKT+K W +K+C V++F N + N +
Sbjct: 142 RHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC--VNNFSDFVGFANFVAFNPNGT 199
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
+ + SD +VKIW R N L + VN ++ NY L + SSDG++
Sbjct: 200 CIASAGSDHTVKIWD--IRVNK--LLQHYQVHSGGVNCVSFHPS-GNY-LITASSDGTLK 253
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK---LIFSGSEDTTIRVWR 253
D + G + LQGH V V+ K L SG D + +WR
Sbjct: 254 IL--DLLEGRLIYT--LQGHTGPVFT-VSFSKGGELFTSGGADAQVLLWR 298
Score = 129 (50.5 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 49/192 (25%), Positives = 82/192 (42%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H+D ++ + F LL + S D+T++ W + DKR + F AH + V ++ + D F
Sbjct: 59 HKDVITSVQFSPLGNLLASASRDRTIRLW-IPDKRGKSSE-FKAHTAPVRSVDFSADGQF 116
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ + S D S+K+W +YR+ +L V S D + S S D +I
Sbjct: 117 LASASEDKSIKVWN-MYRQR---FLYSLYRHTHWVRCAKFSP--DGRLIVSCSEDKTIKI 170
Query: 208 WEKDKMSGGFNHGGFLQGHCFA-VLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAV 266
W+ N F+ G FA + I S D T+++W ++ L
Sbjct: 171 WDTTNKQCVNNFSDFV-G--FANFVAFNPNGTCIASAGSDHTVKIWDIR----VNKLLQH 223
Query: 267 LDGHRGPVRCLA 278
H G V C++
Sbjct: 224 YQVHSGGVNCVS 235
Score = 111 (44.1 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 47/197 (23%), Positives = 84/197 (42%)
Query: 81 KSNTQQQHRDCVSCMAFYHAEG-LLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAI 139
KS+ + H V + F A+G L + S DK++K W + +R + S H V
Sbjct: 94 KSSEFKAHTAPVRSVDF-SADGQFLASASEDKSIKVWNMYRQRF--LYSLYRHTHWVRCA 150
Query: 140 VVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSG 199
+ D + +CS D ++KIW ++ + + + F N +A + + + S
Sbjct: 151 KFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGF----ANFVAFNP--NGTCIASA 204
Query: 200 SSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLV--AIEKLIFSGSEDTTIRVWRRAEG 257
SD ++ W+ +++ H Q H V C+ + + S D T+++ EG
Sbjct: 205 GSDHTVKIWDI-RVNKLLQH---YQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEG 260
Query: 258 GCYHECLAVLDGHRGPV 274
+ L GH GPV
Sbjct: 261 ----RLIYTLQGHTGPV 273
Score = 54 (24.1 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 26/99 (26%), Positives = 47/99 (47%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGF---IKARHGEVRAI--LAHDNMLFTTNKDCKIRIWN 55
++ + S IR+W PD +RG KA VR++ A L + ++D I++WN
Sbjct: 74 LLASASRDRTIRLWI-PD--KRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWN 130
Query: 56 FTVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSC 94
+R + + +L R + ++ +K + R VSC
Sbjct: 131 M-----YRQRFLYSLYRHTHWVRCAKFSPDG--RLIVSC 162
Score = 50 (22.7 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 21/75 (28%), Positives = 31/75 (41%)
Query: 4 TGSSSTRIRVWR-QPDCVERGFIKARHGEVRAILAHD---NMLFTTNKDCKIRIWNFTVS 59
TGS T + +W +P R F H +V + N+L + ++D IR+W
Sbjct: 35 TGSWDTFLMLWSLRPQA--RAFRYVGHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKR 92
Query: 60 DNFRTKKVTTLPRRS 74
K T P RS
Sbjct: 93 GKSSEFKAHTAPVRS 107
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 133 (51.9 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 49/170 (28%), Positives = 75/170 (44%)
Query: 87 QHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDG 146
+H V C F L+ + S DKT+K W +K+C V++F N + N +
Sbjct: 142 RHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC--VNNFSDSVGFANFVDFNPNGT 199
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
+ + SD +VKIW R N L + VN L+ ++ L + SSDG++
Sbjct: 200 CIASAGSDHAVKIWD--IRMNK--LLQHYQVHSCGVNCLSFHPLGNS--LVTASSDGTVK 253
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK---LIFSGSEDTTIRVWR 253
D + G + LQGH V V+ K L+ SG D + +WR
Sbjct: 254 ML--DLIEGRLIYT--LQGHTGPVFT-VSFSKDGELLTSGGADAQVLIWR 298
Score = 132 (51.5 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 53/212 (25%), Positives = 93/212 (43%)
Query: 81 KSNTQQQHRDCVSCMAFYHAEG-LLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAI 139
KS+ + H V + F A+G LL T S DK++K W + +R + S H V
Sbjct: 94 KSSEFKAHTAPVRSVDF-SADGQLLVTASEDKSIKVWSMFRQRF--LYSLYRHTHWVRCA 150
Query: 140 VVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSG 199
+ D + +CS D ++KIW ++ + + ++ F N + + + + S
Sbjct: 151 KFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF----ANFVDFNP--NGTCIASA 204
Query: 200 SSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLV--AIEKLIFSGSEDTTIRVWRRAEG 257
SD ++ W+ +M+ H Q H V CL + + + S D T+++ EG
Sbjct: 205 GSDHAVKIWDI-RMNKLLQH---YQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEG 260
Query: 258 GCYHECLAVLDGHRGPVRCLAASLEMEKVVMG 289
+ L GH GPV ++ S + E + G
Sbjct: 261 ----RLIYTLQGHTGPVFTVSFSKDGELLTSG 288
Score = 118 (46.6 bits), Expect = 0.00043, P = 0.00043
Identities = 35/122 (28%), Positives = 58/122 (47%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H+D V+ + F LL + S D+TV+ W VLD++ + F AH + V ++ + D
Sbjct: 59 HKDVVTSLQFSPQGNLLASASRDRTVRLW-VLDRKGKSSE-FKAHTAPVRSVDFSADGQL 116
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ T S D S+K+W ++R+ +L V S D + S S D +I
Sbjct: 117 LVTASEDKSIKVWS-MFRQR---FLYSLYRHTHWVRCAKFSP--DGRLIVSCSEDKTIKI 170
Query: 208 WE 209
W+
Sbjct: 171 WD 172
Score = 55 (24.4 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 22/96 (22%), Positives = 44/96 (45%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAI--LAHDNMLFTTNKDCKIRIWNFTV 58
++ + S +R+W + KA VR++ A +L T ++D I++W+
Sbjct: 74 LLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSM-- 131
Query: 59 SDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSC 94
FR + + +L R + ++ +K + R VSC
Sbjct: 132 ---FRQRFLYSLYRHTHWVRCAKFSPDG--RLIVSC 162
Score = 47 (21.6 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 19/77 (24%), Positives = 31/77 (40%)
Query: 2 VFTGSSSTRIRVWR-QPDCVERGFIKARHGEVRAILAHD---NMLFTTNKDCKIRIWNFT 57
+ T S T + +W +P R + H +V L N+L + ++D +R+W
Sbjct: 33 IATASWDTFLMLWSLKPHA--RAYRYVGHKDVVTSLQFSPQGNLLASASRDRTVRLWVLD 90
Query: 58 VSDNFRTKKVTTLPRRS 74
K T P RS
Sbjct: 91 RKGKSSEFKAHTAPVRS 107
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 142 (55.0 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 58/199 (29%), Positives = 79/199 (39%)
Query: 87 QHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDG 146
QH V+C AF L T S D V W R H V + + D
Sbjct: 24 QHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLW--RLAGHRGPVKSCCFSPDGR 81
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
+ + SSD S+++W + H L K Q SV ++ S D+ L SG D
Sbjct: 82 LIASSSSDHSIRLWDVARSKCLHVL----KGHQRSVETVSFSP--DSKQLASGGWDKRAI 135
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLC--LVAIEKLIFSGSEDTTIRVWR-RAEGGC--YH 261
WE SG H L GHC ++ + +GS D+T+ +W RA YH
Sbjct: 136 VWEVQ--SGRRVH--LLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYH 191
Query: 262 ECLAVLDGHRGPVRCLAAS 280
L+GH G + CL S
Sbjct: 192 N----LEGHTGNISCLCYS 206
Score = 127 (49.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 53/179 (29%), Positives = 75/179 (41%)
Query: 132 HESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFF 191
H V + + D + + SSD S+++W + H L K Q SV ++ S
Sbjct: 67 HRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVL----KGHQRSVETVSFSP-- 120
Query: 192 DNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLC--LVAIEKLIFSGSEDTTI 249
D+ L SG D WE SG H L GHC ++ + +GS D+T+
Sbjct: 121 DSKQLASGGWDKRAIVWEVQ--SGRRVH--LLVGHCDSIQSSDFSPTSDSLATGSWDSTV 176
Query: 250 RVWR-RAEGGC--YHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWR 305
+W RA YH L+GH G + CL S G L S S D+T VW+
Sbjct: 177 HIWDLRASTPVVSYHN----LEGHTGNISCLCYSAS------GLLA-SGSWDKTICVWK 224
>POMBASE|SPBC21B10.05c [details] [associations]
symbol:pop3 "WD repeat protein Pop3" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000226 "microtubule cytoskeleton
organization" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006397 "mRNA processing" evidence=IMP]
[GO:0031929 "TOR signaling cascade" evidence=TAS] [GO:0031931
"TORC1 complex" evidence=IDA] [GO:0031932 "TORC2 complex"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC21B10.05c GO:GO:0005829 GO:GO:0005634
GO:GO:0000226 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0031929 EMBL:CU329671 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GenomeReviews:CU329671_GR GO:GO:0000070 GO:GO:0031931 GO:GO:0031932
KO:K08266 HOGENOM:HOG000208395 OMA:NNKGNCY OrthoDB:EOG4GF6PT
EMBL:AB016895 PIR:T39922 RefSeq:NP_595682.1
ProteinModelPortal:O74184 IntAct:O74184 STRING:O74184
EnsemblFungi:SPBC21B10.05c.1 GeneID:2540645 KEGG:spo:SPBC21B10.05c
NextBio:20801769 Uniprot:O74184
Length = 314
Score = 142 (55.0 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 65/260 (25%), Positives = 114/260 (43%)
Query: 84 TQQQHRDCVSCMAFYHAEGL-LYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVN 142
T + H + V+ +AF H +G L T S D TVK W D R V H+S VN ++++
Sbjct: 78 TFEGHTNNVTAIAF-HCDGKWLATSSEDGTVKVW---DMRAPSVQRNYDHKSPVNDLLIH 133
Query: 143 QDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSD 202
+ G + +C G V+ W ENS T + + + ++++ + S D L +G++
Sbjct: 134 PNQGELLSCDQSGRVRAWD--LGENSCTHEL-IPEEDVPMSSITVGS--DGSMLIAGNNK 188
Query: 203 GSINFWEKDKMSGG--FNHGGFLQGHC-FAVLCLVAIE-KLIFSGSEDTTIRVWRRAEGG 258
G+ W G Q H + C+++ + K + + S D T+ +W +
Sbjct: 189 GNCYVWRMLNHQGASLLQPVVKFQAHQRYITRCVLSPDVKHLATCSADATVNIWSTEDMS 248
Query: 259 CYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQEKTMCL 318
E L GH+ V A S + +LV +SS D ++W + +T+
Sbjct: 249 FMLE--RRLQGHQRWVWDCAFSADST-----YLVTASS-DHVARLWELS----SGETI-R 295
Query: 319 DYSDYHSNSKTTTTKMDYEM 338
YS +H + DY++
Sbjct: 296 QYSGHHKAAVCVALN-DYQI 314
Score = 114 (45.2 bits), Expect = 0.00059, P = 0.00059
Identities = 38/165 (23%), Positives = 73/165 (44%)
Query: 103 LLYTGSFDKTVKAWRVLDKRCTCVDSFVAH-ESNVNAIVVNQDDGFVFTCSSDGSVKIWR 161
LL + +D T++ W L C+ + H +S VN + ++ D F+ ++ G+ +
Sbjct: 12 LLVSSGYDHTIRFWEALSGICSRT---IQHADSQVNRLCISPDKKFL---AAAGNPHV-- 63
Query: 162 RVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGG 221
R+Y N+ + + F+ + N A++ D +L + S DG++ W+ S N+
Sbjct: 64 RLYDINTSSQMPLMTFEGHTNNVTAIAFHCDGKWLATSSEDGTVKVWDMRAPSVQRNYD- 122
Query: 222 FLQGHCFAV--LCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECL 264
H V L + + + S + +R W E C HE +
Sbjct: 123 ----HKSPVNDLLIHPNQGELLSCDQSGRVRAWDLGENSCTHELI 163
>TAIR|locus:2028481 [details] [associations]
symbol:SCD1 "STOMATAL CYTOKINESIS-DEFECTIVE 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA;IMP] [GO:0009825 "multidimensional cell growth"
evidence=IMP] [GO:0010052 "guard cell differentiation"
evidence=IMP] [GO:0010235 "guard mother cell cytokinesis"
evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0009825 HSSP:P16649 GO:GO:0080008 InterPro:IPR005112
InterPro:IPR001194 InterPro:IPR005113 Pfam:PF03455 Pfam:PF02141
Pfam:PF03456 SMART:SM00801 SMART:SM00799 SMART:SM00800
PROSITE:PS50947 PROSITE:PS50211 PROSITE:PS50946 EMBL:AY082605
IPI:IPI00522154 RefSeq:NP_850959.1 UniGene:At.38309
ProteinModelPortal:Q8RXA7 SMR:Q8RXA7 PaxDb:Q8RXA7 PRIDE:Q8RXA7
EnsemblPlants:AT1G49040.1 GeneID:841327 KEGG:ath:AT1G49040
TAIR:At1g49040 HOGENOM:HOG000029412 InParanoid:Q8RXA7 OMA:YRNFIEN
PhylomeDB:Q8RXA7 ProtClustDB:CLSN2680426 Genevestigator:Q8RXA7
GO:GO:0010235 Uniprot:Q8RXA7
Length = 1187
Score = 150 (57.9 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 63/227 (27%), Positives = 98/227 (43%)
Query: 102 GLLYTGSFDKTVKAWRVLDKRCT-CVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW 160
G + +GS D +V W DK+ T ++ H+S V+ + + + V T + DG+VK+W
Sbjct: 910 GKIVSGSDDLSVIVW---DKQTTQLLEELKGHDSQVSCVKMLSGER-VLTAAHDGTVKMW 965
Query: 161 RRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHG 220
R + T+ + S L+L L + D N W D SG H
Sbjct: 966 D--VRTDMCVATVG----RCSSAILSLEYDDSTGILAAAGRDTVANIW--DIRSGKQMHK 1017
Query: 221 GFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAAS 280
L+GH + + +E + +GS+D T RVW + G C AVL H GPV+ S
Sbjct: 1018 --LKGHTKWIRSIRMVEDTLITGSDDWTARVWSVSRGSCD----AVLACHAGPVQ----S 1067
Query: 281 LEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQEKTMCLDYSDYHSNS 327
+E G + + S D + W D+ C+ HS+S
Sbjct: 1068 VEYSPFDKGII--TGSADGLLRFWE----NDEGGIKCVKNITLHSSS 1108
>MGI|MGI:2384313 [details] [associations]
symbol:Rrp9 "RRP9, small subunit (SSU) processome component,
homolog (yeast)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2384313 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 GO:GO:0030529
GO:GO:0006364 GeneTree:ENSGT00550000075093 HOGENOM:HOG000188732
KO:K14793 CTD:9136 HOVERGEN:HBG079296 OMA:AAKDCTI OrthoDB:EOG4XKV6X
EMBL:AF368232 EMBL:AF368234 EMBL:AK076113 EMBL:BC014703
IPI:IPI00128256 RefSeq:NP_663595.1 UniGene:Mm.239997
ProteinModelPortal:Q91WM3 SMR:Q91WM3 STRING:Q91WM3
PhosphoSite:Q91WM3 PaxDb:Q91WM3 PRIDE:Q91WM3
Ensembl:ENSMUST00000047721 GeneID:27966 KEGG:mmu:27966
UCSC:uc009rkb.1 InParanoid:Q91WM3 NextBio:306456 Bgee:Q91WM3
Genevestigator:Q91WM3 GermOnline:ENSMUSG00000041506 Uniprot:Q91WM3
Length = 475
Score = 145 (56.1 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 60/223 (26%), Positives = 98/223 (43%)
Query: 35 ILAHDNMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQ---HRDC 91
I D +F+ KDC I W+ +K+ +PR +K Q Q H
Sbjct: 154 ITPDDLAIFSAAKDCTIIKWSVETG-----RKLHVIPR-------AKKGAQGQPAGHSSH 201
Query: 92 VSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTC 151
V CMA L +G K + W + C + +F H V+ + + +++
Sbjct: 202 VLCMAISSDGKYLASGDRSKLILIWEA--QSCQHLYTFTGHRDAVSGLAFRKGTHQLYST 259
Query: 152 SSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNAL-ALSSFFDNYFLYSGSSDGSINFWEK 210
S D SVK+W ENS+ TL Q +V AL ALS + +G DG++ W+
Sbjct: 260 SHDRSVKVWNAA--ENSYV--ETLFGHQDAVAALDALSR---ECCVTAGGRDGTVRVWKI 312
Query: 211 DKMSGGFNHGGFLQGHCFAVLCLVAI-EKLIFSGSEDTTIRVW 252
+ S +G QG ++ C+ I E+ + SG++D ++ +W
Sbjct: 313 PEESQLVFYGH--QG---SIDCIHLINEEHMVSGADDGSVALW 350
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 47/180 (26%), Positives = 80/180 (44%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
HRD VS +AF LY+ S D++VK W + + V++ H+ V A+ +
Sbjct: 240 HRDAVSGLAFRKGTHQLYSTSHDRSVKVWNAAEN--SYVETLFGHQDAVAALDALSRECC 297
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
V DG+V++W+ E S + Q S++ + L + + SG+ DGS+
Sbjct: 298 VTAGGRDGTVRVWK--IPEESQ---LVFYGHQGSIDCIHL---INEEHMVSGADDGSVAL 349
Query: 208 WEKDKM--------SGGFNHG--GFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEG 257
W K + G HG G Q + + + L+ +GS + +R+W+ EG
Sbjct: 350 WGLSKKRPLALQREAHGL-HGEPGLEQPFWVSSVAALLNTDLVATGSHNARVRLWQCGEG 408
Score = 115 (45.5 bits), Expect = 0.00093, P = 0.00093
Identities = 52/213 (24%), Positives = 88/213 (41%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCV---------DSFVAHESNVNA 138
H+ ++C+ + +++ + D T+ W V R V H S+V
Sbjct: 145 HQLSITCLVITPDDLAIFSAAKDCTIIKWSVETGRKLHVIPRAKKGAQGQPAGHSSHVLC 204
Query: 139 IVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYS 198
+ ++ D ++ + + IW + H T T + +V+ LA + LYS
Sbjct: 205 MAISSDGKYLASGDRSKLILIWEA--QSCQHLYTFT--GHRDAVSGLAFRK--GTHQLYS 258
Query: 199 GSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK--LIFSGSEDTTIRVWRRAE 256
S D S+ W + S + L GH AV L A+ + + +G D T+RVW+ E
Sbjct: 259 TSHDRSVKVWNAAENS----YVETLFGHQDAVAALDALSRECCVTAGGRDGTVRVWKIPE 314
Query: 257 GGCYHECLAVLDGHRGPVRCLAASLEMEKVVMG 289
E V GH+G + C+ E E +V G
Sbjct: 315 -----ESQLVFYGHQGSIDCIHLINE-EHMVSG 341
>UNIPROTKB|O43818 [details] [associations]
symbol:RRP9 "U3 small nucleolar RNA-interacting protein 2"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=TAS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471055 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003723 GO:GO:0006364 GO:GO:0030532
GO:GO:0005732 HOGENOM:HOG000188732 KO:K14793 EMBL:AJ001340
EMBL:AK313696 EMBL:BC001113 EMBL:BC009879 EMBL:BC010048
EMBL:BC023662 IPI:IPI00217862 RefSeq:NP_004695.1 UniGene:Hs.153768
ProteinModelPortal:O43818 SMR:O43818 IntAct:O43818 STRING:O43818
PhosphoSite:O43818 DOSAC-COBS-2DPAGE:O43818 SWISS-2DPAGE:O43818
PaxDb:O43818 PeptideAtlas:O43818 PRIDE:O43818 DNASU:9136
Ensembl:ENST00000232888 GeneID:9136 KEGG:hsa:9136 UCSC:uc003dbw.1
CTD:9136 GeneCards:GC03M051943 HGNC:HGNC:16829 HPA:HPA038798
neXtProt:NX_O43818 PharmGKB:PA162402176 HOVERGEN:HBG079296
InParanoid:O43818 OMA:AAKDCTI OrthoDB:EOG4XKV6X PhylomeDB:O43818
GenomeRNAi:9136 NextBio:34259 Bgee:O43818 CleanEx:HS_RRP9
Genevestigator:O43818 GermOnline:ENSG00000114767 Uniprot:O43818
Length = 475
Score = 145 (56.1 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 57/216 (26%), Positives = 95/216 (43%)
Query: 39 DNMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFY 98
D+ +F+ KDC I W+ V +K+ +PR H V CMA
Sbjct: 158 DSAIFSAAKDCSIIKWS--VESG---RKLHVIPRAKK----GAEGKPPGHSSHVLCMAIS 208
Query: 99 HAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVK 158
L +G K + W + C + +F H V+ + + +++ S D SVK
Sbjct: 209 SDGKYLASGDRSKLILIWEA--QSCQHLYTFTGHRDAVSGLAFRRGTHQLYSTSHDRSVK 266
Query: 159 IWRRVYRENSHTLTMTLKFQQSSVNAL-ALSSFFDNYFLYSGSSDGSINFWEKDKMSGGF 217
+W ENS+ TL Q +V AL ALS + +G DG++ W+ + S
Sbjct: 267 VWN--VAENSYV--ETLFGHQDAVAALDALSR---ECCVTAGGRDGTVRVWKIPEESQLV 319
Query: 218 NHGGFLQGHCFAVLCLVAI-EKLIFSGSEDTTIRVW 252
+G QG ++ C+ I E+ + SG++D ++ +W
Sbjct: 320 FYGH--QG---SIDCIHLINEEHMVSGADDGSVALW 350
Score = 143 (55.4 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 47/179 (26%), Positives = 79/179 (44%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
HRD VS +AF LY+ S D++VK W V + + V++ H+ V A+ +
Sbjct: 240 HRDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAEN--SYVETLFGHQDAVAALDALSRECC 297
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
V DG+V++W+ E S + Q S++ + L + + SG+ DGS+
Sbjct: 298 VTAGGRDGTVRVWK--IPEESQ---LVFYGHQGSIDCIHL---INEEHMVSGADDGSVAL 349
Query: 208 WEKDKMSG----GFNHG-----GFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEG 257
W K HG G Q + + + L+ +GS + +R+W+ EG
Sbjct: 350 WGLSKKRPLALQREAHGLRGEPGLEQPFWISSVAALLNTDLVATGSHSSCVRLWQCGEG 408
>DICTYBASE|DDB_G0278285 [details] [associations]
symbol:copB2 "coatomer protein complex beta 2 subunit
(beta prime)" species:44689 "Dictyostelium discoideum" [GO:0030117
"membrane coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278285 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GenomeReviews:CM000152_GR GO:GO:0005198 EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030126
HSSP:P63005 InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
RefSeq:XP_642264.1 ProteinModelPortal:Q54YD8 STRING:Q54YD8
EnsemblProtists:DDB0233798 GeneID:8621473 KEGG:ddi:DDB_G0278285
ProtClustDB:CLSZ2729111 Uniprot:Q54YD8
Length = 1005
Score = 150 (57.9 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 62/237 (26%), Positives = 104/237 (43%)
Query: 35 ILA--HDNMLFTTNKDCKIRIWNFTVSDN-------FRTKK---VT----TLPRRSSFLS 78
ILA +D ++ N + + + +F VS N F KK VT T R ++ +
Sbjct: 30 ILASLYDGNVYIWNYETQNMVKSFEVSPNNPVRTARFIAKKQWIVTGSDDTYIRVYNYNT 89
Query: 79 FSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNA 138
K + + H D + C+ + + + S D +K W +K + F H V +
Sbjct: 90 MEKIKSFEAHADYIRCIIVHPTLPYILSSSDDMFIKLWDY-EKGWSNTQVFEGHSHYVMS 148
Query: 139 IVVNQDDGFVF-TCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLY 197
I N D F T S D +VK+W + + H TL+ + +N++ S + +L
Sbjct: 149 IAWNPKDTNQFATASLDKTVKVWS-INSPHPH---FTLEGHEKGINSVEYFSGGEKPYLI 204
Query: 198 SGSSDGSINFWEKDKMSGGFNHGGFLQGHC--FAVLCLVAIEKLIFSGSEDTTIRVW 252
SG+ D + W+ + L+GH +V+C LI SGSED T+++W
Sbjct: 205 SGADDKLVKIWDYQSKTCVQT----LEGHSNNVSVVCYHPELPLILSGSEDGTVKLW 257
Score = 119 (46.9 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
Identities = 40/171 (23%), Positives = 76/171 (44%)
Query: 54 WNFTVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHA--EGLLYTGSFDK 111
WN ++ F T + + S S T + H ++ + ++ + L +G+ DK
Sbjct: 151 WNPKDTNQFATASLDKTVKVWSINSPHPHFTLEGHEKGINSVEYFSGGEKPYLISGADDK 210
Query: 112 TVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTL 171
VK W K TCV + H +NV+ + + + + + S DG+VK+W +++ L
Sbjct: 211 LVKIWDYQSK--TCVQTLEGHSNNVSVVCYHPELPLILSGSEDGTVKLWH----SSTYRL 264
Query: 172 TMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFW-EKDKMSGGFNHGG 221
TL + V +++ + F+ G DG++ K+K + GG
Sbjct: 265 ERTLNYGMGFV--WSMNFLRGSNFIGLGYDDGTVVLKIGKNKPPVSMDQGG 313
Score = 63 (27.2 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDNM--LFTTNKDCKIRIWNF 56
+ TGS T IRV+ + +A +R I+ H + + +++ D I++W++
Sbjct: 73 IVTGSDDTYIRVYNYNTMEKIKSFEAHADYIRCIIVHPTLPYILSSSDDMFIKLWDY 129
Score = 44 (20.5 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 318 LDYSDYHSNSKTTTTKMDYEM-----SPVLSPSWVEK 349
LD D+ S + TTTT + SP+ SPS + K
Sbjct: 897 LDDLDFTSTTTTTTTTTNTNTTQKVASPLSSPSPIRK 933
>UNIPROTKB|F1MNS4 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 IPI:IPI00711976 UniGene:Bt.20483 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 EMBL:DAAA02057306
ProteinModelPortal:F1MNS4 Ensembl:ENSBTAT00000027147 Uniprot:F1MNS4
Length = 800
Score = 142 (55.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 53/204 (25%), Positives = 85/204 (41%)
Query: 11 IRVWR-----QPDCVERGFIKARH-GEVRAILAHDNMLFTTNKDCKIRIWNFTVSDNFRT 64
IRVWR + CV +G G + + L T ++DC +++W +
Sbjct: 400 IRVWRMNKSGEVACVAQGSGHTHSVGTICCSRLKETFLVTGSQDCTVKLWPLPEA---LL 456
Query: 65 KKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCT 124
K T FL TQ+ H ++ +A + LL TGS D+T K W + RC
Sbjct: 457 SKGTGHEGGPVFLQAQA--TQRCHDKDINSVAVAPNDKLLATGSQDRTAKLWAL--PRCQ 512
Query: 125 CVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNA 184
+ +F H + + + D + T S+DG++K+W + T + +SV
Sbjct: 513 LLGTFSGHRRGLWCVQFSPMDQVLATASADGTIKLWAL----QDFSCLKTFEGHDASVLK 568
Query: 185 LALSSFFDNYFLYSGSSDGSINFW 208
+A S L S SDG + W
Sbjct: 569 VAFVSRGTQ--LLSSGSDGLLKLW 590
Score = 129 (50.5 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 53/204 (25%), Positives = 91/204 (44%)
Query: 117 RVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLK 176
+V D + + H V A+ V + +C+ D S+++WR + +
Sbjct: 360 KVFDLQTSACQILHGHTDIVLALDVFRKGRLFASCAKDQSIRVWR-MNKSGEVACVAQGS 418
Query: 177 FQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDK--MSGGFNH-GG--FLQGH----C 227
SV + S + FL +GS D ++ W + +S G H GG FLQ C
Sbjct: 419 GHTHSVGTICCSRLKET-FLVTGSQDCTVKLWPLPEALLSKGTGHEGGPVFLQAQATQRC 477
Query: 228 FAV-LCLVAI---EKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEM 283
+ VA+ +KL+ +GS+D T ++W A C + L GHR + C+ S M
Sbjct: 478 HDKDINSVAVAPNDKLLATGSQDRTAKLW--ALPRC--QLLGTFSGHRRGLWCVQFS-PM 532
Query: 284 EKVVMGFLVYSSSLDQTFKVWRVK 307
++V+ ++S D T K+W ++
Sbjct: 533 DQVLA-----TASADGTIKLWALQ 551
Score = 123 (48.4 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 52/237 (21%), Positives = 101/237 (42%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDK-RCTCVDSFVAHESNVNAIVVNQ-DD 145
H D V + + L + + D++++ WR+ CV H +V I ++ +
Sbjct: 375 HTDIVLALDVFRKGRLFASCAKDQSIRVWRMNKSGEVACVAQGSGHTHSVGTICCSRLKE 434
Query: 146 GFVFTCSSDGSVKIW----RRVYRENSHT-------LTMTLKFQQSSVNALALSSFFDNY 194
F+ T S D +VK+W + + H T + +N++A++ ++
Sbjct: 435 TFLVTGSQDCTVKLWPLPEALLSKGTGHEGGPVFLQAQATQRCHDKDINSVAVAP--NDK 492
Query: 195 FLYSGSSDGSINFWE--KDKMSGGFNHGGFLQGHCFAVLCLV--AIEKLIFSGSEDTTIR 250
L +GS D + W + ++ G F+ GH + C+ +++++ + S D TI+
Sbjct: 493 LLATGSQDRTAKLWALPRCQLLGTFS------GHRRGLWCVQFSPMDQVLATASADGTIK 546
Query: 251 VWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
+W + CL +GH V L++ V G + SS D K+W +K
Sbjct: 547 LWALQD----FSCLKTFEGHDASV------LKVAFVSRGTQLLSSGSDGLLKLWTIK 593
Score = 121 (47.7 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 42/149 (28%), Positives = 66/149 (44%)
Query: 63 RTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKR 122
RT K+ LPR +FS HR + C+ F + +L T S D T+K W + D
Sbjct: 501 RTAKLWALPRCQLLGTFSG------HRRGLWCVQFSPMDQVLATASADGTIKLWALQD-- 552
Query: 123 CTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSV 182
+C+ +F H+++V + + + SDG +K+W + N TL + V
Sbjct: 553 FSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLW--TIKNNE--CVRTLDAHEDKV 608
Query: 183 NALALSSFFDNYFLYSGSSDGSINFWEKD 211
L S D +G+SD + W KD
Sbjct: 609 WGLHCSRLDDRAL--TGASDSRVVLW-KD 634
Score = 99 (39.9 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 69/282 (24%), Positives = 112/282 (39%)
Query: 29 HGEVRAILAHD----NMLFTT-NKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFLSFSKSN 83
HG +LA D LF + KD IR+W S +V + + S +
Sbjct: 373 HGHTDIVLALDVFRKGRLFASCAKDQSIRVWRMNKSG-----EVACVAQGSG-------H 420
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAW---RVLDKRCTCVDS---FV------- 130
T C S + E L TGS D TVK W L + T + F+
Sbjct: 421 THSVGTICCSRLK----ETFLVTGSQDCTVKLWPLPEALLSKGTGHEGGPVFLQAQATQR 476
Query: 131 AHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSF 190
H+ ++N++ V +D + T S D + K+W + L T + + + S
Sbjct: 477 CHDKDINSVAVAPNDKLLATGSQDRTAKLWALPRCQ----LLGTFSGHRRGLWCVQFSPM 532
Query: 191 FDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK---LIFSGSEDT 247
+ L + S+DG+I W F+ +GH +VL + + + L+ SGS D
Sbjct: 533 --DQVLATASADGTIKLWALQD----FSCLKTFEGHDASVLKVAFVSRGTQLLSSGS-DG 585
Query: 248 TIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMG 289
+++W +EC+ LD H V L S ++ + G
Sbjct: 586 LLKLWTIKN----NECVRTLDAHEDKVWGLHCSRLDDRALTG 623
Score = 64 (27.6 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN----MLFTTNKDCKIRIWN 55
++ TG +RVW C + G V + H + +LF++ D IR+W+
Sbjct: 123 LLATGGCDGAVRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPARLLLFSSAADTSIRVWS 181
>SGD|S000003105 [details] [associations]
symbol:SEC27 "Essential beta'-coat protein of the COPI
coatomer" species:4932 "Saccharomyces cerevisiae" [GO:0000139
"Golgi membrane" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IMP;IPI] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0030126 "COPI vesicle coat" evidence=IGI;ISS] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IMP] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030117 "membrane coat" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000003105 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:BK006941
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 GO:GO:0043130
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG OrthoDB:EOG48H0BF
GO:GO:0032511 EMBL:U11237 EMBL:X92670 EMBL:Z72659 PIR:B55123
RefSeq:NP_011378.1 PDB:2YNN PDB:2YNO PDB:2YNP PDBsum:2YNN
PDBsum:2YNO PDBsum:2YNP ProteinModelPortal:P41811 SMR:P41811
DIP:DIP-6468N IntAct:P41811 MINT:MINT-428887 STRING:P41811
PaxDb:P41811 PeptideAtlas:P41811 EnsemblFungi:YGL137W GeneID:852740
KEGG:sce:YGL137W CYGD:YGL137w NextBio:972153 Genevestigator:P41811
GermOnline:YGL137W Uniprot:P41811
Length = 889
Score = 148 (57.2 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 57/223 (25%), Positives = 89/223 (39%)
Query: 31 EVRAILAHDNMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRD 90
EVR+I + + K + W SD+FR + V + F + H D
Sbjct: 47 EVRSIQVTETPV-RAGKFIARKNWIIVGSDDFRIR-VFNYNTGEKVVDF------EAHPD 98
Query: 91 CVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFT 150
+ +A + + + +GS D TVK W + +F HE V + N D F
Sbjct: 99 YIRSIAVHPTKPYVLSGSDDLTVKLWN-WENNWALEQTFEGHEHFVMCVAFNPKDPSTFA 157
Query: 151 CSS-DGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWE 209
D +VK+W + TLT Q+ VN + D ++ + S D +I W+
Sbjct: 158 SGCLDRTVKVWSLGQSTPNFTLTTG---QERGVNYVDYYPLPDKPYMITASDDLTIKIWD 214
Query: 210 KDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVW 252
S G + FAV +I SGSED T+++W
Sbjct: 215 YQTKSCVATLEGHMSNVSFAVFHPTL--PIIISGSEDGTLKIW 255
Score = 118 (46.6 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 48/192 (25%), Positives = 82/192 (42%)
Query: 126 VDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNAL 185
VD F AH + +I V+ +V + S D +VK+W EN+ L T + + V +
Sbjct: 91 VD-FEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNW---ENNWALEQTFEGHEHFVMCV 146
Query: 186 ALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFN-HGGFLQGHCFAVLCLVAIEKLIFSGS 244
A + + F SG D ++ W + + F G +G + + + + + S
Sbjct: 147 AFNPKDPSTFA-SGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS 205
Query: 245 EDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
+D TI++W C+A L+GH V S + + ++ S S D T K+W
Sbjct: 206 DDLTIKIWDYQT----KSCVATLEGHMSNV-----SFAVFHPTLPIII-SGSEDGTLKIW 255
Query: 305 RVKVMPDQEKTM 316
EKT+
Sbjct: 256 NSSTYK-VEKTL 266
Score = 64 (27.6 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRA--ILAHDNMLFTTNKDCKIRIWNFTVS 59
V T S R+ +W VE I+ VRA +A N + + D +IR++N+
Sbjct: 28 VLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG 87
Query: 60 D 60
+
Sbjct: 88 E 88
Score = 50 (22.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 14/54 (25%), Positives = 25/54 (46%)
Query: 28 RHGEVRAILAH--DNMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLP-RRSSFLS 78
R V+ I H + + TT ++ +WN+ R+ +VT P R F++
Sbjct: 12 RSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIA 65
>POMBASE|SPBC16C6.13c [details] [associations]
symbol:sec27 "coatomer beta' subunit (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=ISO]
[GO:0030126 "COPI vesicle coat" evidence=ISO] [GO:0032511 "late
endosome to vacuole transport via multivesicular body sorting
pathway" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 PomBase:SPBC16C6.13c
GO:GO:0005829 GO:GO:0005634 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006888 GO:GO:0030126 GO:GO:0006890
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
OMA:LRNKAFG PIR:T39962 RefSeq:XP_001713153.1
ProteinModelPortal:O42937 STRING:O42937 EnsemblFungi:SPBC16C6.13c.1
GeneID:2540050 KEGG:spo:SPBC16C6.13c OrthoDB:EOG48H0BF
NextBio:20801187 GO:GO:0032511 Uniprot:O42937
Length = 796
Score = 150 (57.9 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 48/173 (27%), Positives = 72/173 (41%)
Query: 84 TQ-QQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVN 142
TQ + H D + + + + L T S D T+K + D CV +F H V ++ +N
Sbjct: 92 TQFEAHPDYIRALVVHPTQPFLLTSSDDMTIKCFN-WDMSWKCVQTFEGHSRYVMSLAIN 150
Query: 143 QDDGFVFTCSS-DGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSS 201
D F S DG+VK+W S TL+ VN + D +L +
Sbjct: 151 PKDTNTFASSCLDGTVKVWSF----GSSVANFTLQAHDRGVNYVNYYPAGDKPYLITAGD 206
Query: 202 DGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK--LIFSGSEDTTIRVW 252
D I W+ + L+GH V K +I SGSED T+++W
Sbjct: 207 DNLIKVWDYQTKACV----RILEGHTNNVSFAFFHSKFPIIISGSEDGTVKIW 255
Score = 41 (19.5 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 12/54 (22%), Positives = 29/54 (53%)
Query: 29 HGE-VRAILAH--DNMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRS-SFLS 78
H E V+A+ H + + ++ + ++ IWN+ R+ + +P R+ +F++
Sbjct: 13 HTERVKAVDFHPTEPWVIASHYNGQVGIWNYNTQTLVRSFDINDVPIRACAFIA 66
Score = 39 (18.8 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 6/27 (22%), Positives = 14/27 (51%)
Query: 34 AILAHDNMLFTTNKDCKIRIWNFTVSD 60
A +A N + D ++R++N+ +
Sbjct: 63 AFIARKNWFVCGSDDFQVRVYNYNTGE 89
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 143 (55.4 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 49/171 (28%), Positives = 78/171 (45%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H+D V+C+ F + LL +GS DKTV+ W K + V F AH + V ++ D
Sbjct: 60 HKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSDGQS 117
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFF-DNYFLYSGSSDGSIN 206
+ T S D +VK+W ++H Q +N + + F D + S S D ++
Sbjct: 118 LVTASDDKTVKVW------STHRQRFLFSLTQH-INWVRCAKFSPDGRLIVSASDDKTVK 170
Query: 207 FWEKDK---MSGGFNHGGFLQGHCF--AVLCLVAIEKLIFSGSEDTTIRVW 252
W+K + HGGF+ F + C+ A +G D T++VW
Sbjct: 171 LWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAA------AGM-DNTVKVW 214
Score = 134 (52.2 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 57/200 (28%), Positives = 84/200 (42%)
Query: 57 TVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAW 116
T SD+ +T KV + R FL FS + QH + V C F L+ + S DKTVK W
Sbjct: 120 TASDD-KTVKVWST-HRQRFL-FSLT----QHINWVRCAKFSPDGRLIVSASDDKTVKLW 172
Query: 117 RVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLK 176
+ C + S+ H V + + + D +VK+W +H L +
Sbjct: 173 DKTSREC--IHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDA----RTHRLLQHYQ 226
Query: 177 FQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAI 236
++VNAL+ NY L + SSD ++ D M G + L GH VA
Sbjct: 227 LHSAAVNALSFHPS-GNY-LITASSDSTLKIL--DLMEGRLLYT--LHGHQ-GPATTVAF 279
Query: 237 EKL---IFSGSEDTTIRVWR 253
+ SG D + VW+
Sbjct: 280 SRTGEYFASGGSDEQVMVWK 299
Score = 125 (49.1 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 49/201 (24%), Positives = 83/201 (41%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
HRD V+C+ F L +GS D T+ W + K + F H+ V + +
Sbjct: 18 HRDAVTCVDFSLNTKHLASGSMDSTLMIWHM--KPQSRAYRFTGHKDAVTCVNFSPSGHL 75
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ + S D +V+IW + S + ++V ++ S D L + S D ++
Sbjct: 76 LASGSRDKTVRIWVPNVKGES----TVFRAHTATVRSVHFCS--DGQSLVTASDDKTVKV 129
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KLIFSGSEDTTIRVWRRAEGGCYHE-C- 263
W + F+ L H V C +LI S S+D T+++W + C H C
Sbjct: 130 WSTHRQRFLFS----LTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCE 185
Query: 264 ----LAVLDGHRGPVRCLAAS 280
+ +D H C+AA+
Sbjct: 186 HGGFVTYVDFHPSGT-CIAAA 205
Score = 50 (22.7 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 13/57 (22%), Positives = 26/57 (45%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAI-LAHDNM-LFTTNKDCKIRIWN 55
++ +GS +R+W E +A VR++ D L T + D +++W+
Sbjct: 75 LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWS 131
>UNIPROTKB|E1BYR9 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:AADN02024429 EMBL:AADN02024430 IPI:IPI00589713
Ensembl:ENSGALT00000002475 Uniprot:E1BYR9
Length = 608
Score = 145 (56.1 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 45/166 (27%), Positives = 68/166 (40%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V+ + F LL TG D+ VK W VL RC S + + +I + +
Sbjct: 321 HDGEVNAVQFSPGSRLLATGGMDRRVKLWEVLGDRCEPKGSLSGSNAGITSIEFDSAGSY 380
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ S+D + +IW HTLT S L+ DN + SGS D ++
Sbjct: 381 LLAASNDFASRIWTVDDNRLRHTLT------GHSGKVLSAKFLLDNARIVSGSHDRTLKL 434
Query: 208 WE-KDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVW 252
W+ + K+ F C ++C E+ + SG D IR W
Sbjct: 435 WDLRSKVCN--IKTVFAGSSCNDIVCT---EQCVMSGHFDKKIRFW 475
>DICTYBASE|DDB_G0282489 [details] [associations]
symbol:mhkD "putative myosin heavy chain kinase D"
species:44689 "Dictyostelium discoideum" [GO:0031037 "myosin II
filament disassembly" evidence=IMP] [GO:0016905 "myosin heavy chain
kinase activity" evidence=IEA;ISS] [GO:0006468 "protein
phosphorylation" evidence=IEA;ISS] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA;ISS] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016310 "phosphorylation"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR004166 InterPro:IPR011009
InterPro:IPR015943 Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS51158 SMART:SM00320 SMART:SM00811
dictyBase:DDB_G0282489 GO:GO:0005524 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
EMBL:AAFI02000047 GenomeReviews:CM000152_GR SUPFAM:SSF56112
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:Q923J1
GO:GO:0031037 ProtClustDB:CLSZ2429540 GO:GO:0016905
RefSeq:XP_640080.1 ProteinModelPortal:Q54SF9
EnsemblProtists:DDB0220109 GeneID:8623609 KEGG:ddi:DDB_G0282489
OMA:FRAHRRS Uniprot:Q54SF9
Length = 941
Score = 147 (56.8 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 61/250 (24%), Positives = 107/250 (42%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDK----RCTCVDSFVAHESNVNAIVVNQ 143
H + V + + LY+ S D VK W + + + +DSF AH ++ +++N+
Sbjct: 636 HDERVCSLLINQDKTKLYSASADGYVKIWNLTNNEDLSKIQMIDSFRAHRRSIEKMLLNE 695
Query: 144 DDGFVFTCSSDGSVKIWR--------RVYRENSHTLTMT------LKFQQSSVNALALSS 189
++FT SSDG++KIW +++S + + + L+ + VN + +
Sbjct: 696 K--YLFTASSDGTIKIWSLPTTTTTTTTSKQSSSSSSSSYECIGKLEDHTAEVNDMCID- 752
Query: 190 FFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTI 249
+N FL S S D I ++ F L H ++ + K +FS S D +I
Sbjct: 753 -IENNFLVSCSFDKQIKIYDLST----FKCIKSLNAHGKSIKSIYMSGKYLFSSSNDQSI 807
Query: 250 RVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVM 309
++W C + + D H P+ SL M G ++S+S D K W +
Sbjct: 808 KIWDLEMCMCVY---GMNDAHDAPI----TSLRM----FGNRLFSASKDGEIKDWNLSTF 856
Query: 310 PDQEKTMCLD 319
+ T LD
Sbjct: 857 ---QPTTTLD 863
Score = 146 (56.5 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 66/285 (23%), Positives = 118/285 (41%)
Query: 2 VFTGSSSTRIRVWR---QPDCVERGFI---KARHGEVRAILAHDNMLFTTNKDCKIRIWN 55
+++ S+ +++W D + I +A + +L ++ LFT + D I+IW+
Sbjct: 652 LYSASADGYVKIWNLTNNEDLSKIQMIDSFRAHRRSIEKMLLNEKYLFTASSDGTIKIWS 711
Query: 56 F-TVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVK 114
T + T K ++ SS+ K + H V+ M L + SFDK +K
Sbjct: 712 LPTTTTTTTTSKQSSSSSSSSYECIGKL---EDHTAEVNDMCIDIENNFLVSCSFDKQIK 768
Query: 115 AWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMT 174
+ + +C + S AH ++ +I ++ ++F+ S+D S+KIW + M
Sbjct: 769 IYDLSTFKC--IKSLNAHGKSIKSIYMSGK--YLFSSSNDQSIKIW-------DLEMCMC 817
Query: 175 LKFQQSSVNALALS-SFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCL 233
+ + +A S F N L+S S DG I W Q + L
Sbjct: 818 VYGMNDAHDAPITSLRMFGNR-LFSASKDGEIKDWNLSTFQPTTTLD---QHNMAITDIL 873
Query: 234 VAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLA 278
V +F S+D+TIR+ + + ++ HR V LA
Sbjct: 874 VTSNGYLFVSSDDSTIRIIDISNQNEPIKIISSTKAHRSGVNSLA 918
Score = 144 (55.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 57/235 (24%), Positives = 105/235 (44%)
Query: 119 LDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQ 178
L+ T + H+ V ++++NQD +++ S+DG VKIW E+ + M F+
Sbjct: 623 LNSELTSIVHLSGHDERVCSLLINQDKTKLYSASADGYVKIWNLTNNEDLSKIQMIDSFR 682
Query: 179 --QSSVNALALSSFFDNYFLYSGSSDGSINFWE---------KDKMSGGFNHGGF----- 222
+ S+ + L+ + Y L++ SSDG+I W K S + +
Sbjct: 683 AHRRSIEKMLLN---EKY-LFTASSDGTIKIWSLPTTTTTTTTSKQSSSSSSSSYECIGK 738
Query: 223 LQGHCFAV--LCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAAS 280
L+ H V +C+ + S S D I+++ + +C+ L+ H ++ + S
Sbjct: 739 LEDHTAEVNDMCIDIENNFLVSCSFDKQIKIYDLST----FKCIKSLNAHGKSIKSIYMS 794
Query: 281 LEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQEKTMCL-DYSDYHSNSKTTTTKM 334
G ++SSS DQ+ K+W D E MC+ +D H ++ T+ +M
Sbjct: 795 --------GKYLFSSSNDQSIKIW------DLEMCMCVYGMNDAH-DAPITSLRM 834
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 140 (54.3 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 60/200 (30%), Positives = 88/200 (44%)
Query: 57 TVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAW 116
T SD+ +T KV T+ R FL FS S QH + V C F L+ + S DKTVK W
Sbjct: 121 TASDD-KTIKVWTV-HRQKFL-FSLS----QHINWVRCARFSPDGRLIASASDDKTVKLW 173
Query: 117 RVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLK 176
+ C + SF H N + + + +D +VK+W R N L +
Sbjct: 174 DKTSREC--IHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWD--VRMNR--LLQHYQ 227
Query: 177 FQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAI 236
++VN+L+ NY L + S+D ++ D + G + L GH C VA
Sbjct: 228 VHTAAVNSLSFHPS-GNY-LITASNDSTLKIL--DLLEGRLLYT--LHGHQGPATC-VAF 280
Query: 237 EKL--IF-SGSEDTTIRVWR 253
+ F SG D + VW+
Sbjct: 281 SRTGDFFASGGSDEQVMVWK 300
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 49/171 (28%), Positives = 78/171 (45%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H+D V C+ F + L+ +GS DKTV W K + V F AH + V ++ + D
Sbjct: 61 HKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTV--FKAHTATVRSVHFSSDGQS 118
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFF-DNYFLYSGSSDGSIN 206
+ T S D ++K+W V+R+ Q +N + + F D + S S D ++
Sbjct: 119 LVTASDDKTIKVWT-VHRQK-----FLFSLSQH-INWVRCARFSPDGRLIASASDDKTVK 171
Query: 207 FWEKDKMS--GGF-NHGGFLQGHCF--AVLCLVAIEKLIFSGSEDTTIRVW 252
W+K F HGGF F + C+ A +G+ D T++VW
Sbjct: 172 LWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAA------AGT-DKTVKVW 215
Score = 122 (48.0 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 45/177 (25%), Positives = 75/177 (42%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDK-RCTCVDSFVAHESNVNAIVVNQDDG 146
HRD ++ + F + L +GS D +K W + + R C+ V H+ V + +
Sbjct: 19 HRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCL---VGHKDAVMCVQFSPSGH 75
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
V + S D +V +W + S K ++V ++ SS D L + S D +I
Sbjct: 76 LVASGSRDKTVCLWVPSVKGES----TVFKAHTATVRSVHFSS--DGQSLVTASDDKTIK 129
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLC--LVAIEKLIFSGSEDTTIRVWRRAEGGCYH 261
W + F+ L H V C +LI S S+D T+++W + C H
Sbjct: 130 VWTVHRQKFLFS----LSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIH 182
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 51/202 (25%), Positives = 82/202 (40%)
Query: 81 KSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIV 140
+S + H V + F L T S DKT+K W V R + S H + V
Sbjct: 96 ESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTV--HRQKFLFSLSQHINWVRCAR 153
Query: 141 VNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGS 200
+ D + + S D +VK+W + RE H+ F + A + + +
Sbjct: 154 FSPDGRLIASASDDKTVKLWDKTSRECIHS------FCEHGGFANHVEFHPSGTCIAAAG 207
Query: 201 SDGSINFWEKDKMSGGFNHGGFLQGHCFAV--LCLVAIEKLIFSGSEDTTIRVWRRAEGG 258
+D ++ W+ +M+ H Q H AV L + + S D+T+++ EG
Sbjct: 208 TDKTVKVWDV-RMNRLLQH---YQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEG- 262
Query: 259 CYHECLAVLDGHRGPVRCLAAS 280
L L GH+GP C+A S
Sbjct: 263 ---RLLYTLHGHQGPATCVAFS 281
>CGD|CAL0002120 [details] [associations]
symbol:orf19.3862 species:5476 "Candida albicans" [GO:0010008
"endosome membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0031931 "TORC1 complex" evidence=IEA] [GO:0031932
"TORC2 complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031234 "extrinsic to internal side of plasma membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0001558 "regulation
of cell growth" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0031929 "TOR signaling cascade" evidence=IEA] [GO:0031505
"fungal-type cell wall organization" evidence=IEA] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IEA] [GO:0030950
"establishment or maintenance of actin cytoskeleton polarity"
evidence=IEA] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0030295 "protein kinase activator activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0002120 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000125
EMBL:AACQ01000124 KO:K08266 HOGENOM:HOG000208395 RefSeq:XP_441049.1
RefSeq:XP_713529.1 ProteinModelPortal:Q59V90 STRING:Q59V90
GeneID:3644824 GeneID:6335359 KEGG:cal:CaO19.11343
KEGG:cal:CaO19.3862 Uniprot:Q59V90
Length = 328
Score = 140 (54.3 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 59/244 (24%), Positives = 106/244 (43%)
Query: 68 TTLPRRSSFLSFSKSN---TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCT 124
T+ SS + S +N T + H++ V+ + F + T S D TVK W D R
Sbjct: 76 TSASTSSSNQNNSNNNPVMTFEGHKNNVTSLQFQADNKWMVTSSEDGTVKVW---DVRSP 132
Query: 125 CVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNA 184
V H+ VN +V++ + G + +C DG++++W ENS T + + +N+
Sbjct: 133 SVQRNYKHQCPVNEVVIHPNQGELISCDQDGNIRVWD--LGENSCTHHL-IPEDDVPINS 189
Query: 185 LALSSFFDNYFLYSGSSDGSINFWEKDKMSGG--FNHGGFLQGHC-FAVLCLVAIE-KLI 240
L+++S D L +G++ G+ W+ + H + L++ + K +
Sbjct: 190 LSVAS--DGSMLVAGNNKGNCYVWKMQNQRDATVLTPVTKFRSHSKYITRVLLSTDMKHL 247
Query: 241 FSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQT 300
+ S D T R+W + L GH+ V A S + +LV + S D
Sbjct: 248 ATCSADHTARIWSTEQN---FNLETTLQGHQRWVWDCAFSADS-----AYLVTACS-DHY 298
Query: 301 FKVW 304
++W
Sbjct: 299 VRLW 302
Score = 98 (39.6 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 32/133 (24%), Positives = 59/133 (44%)
Query: 103 LLYTGSFDKTVKAWRVLDKR----CTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVK 158
+L G+ W++ ++R T V F +H + ++++ D + TCS+D + +
Sbjct: 198 MLVAGNNKGNCYVWKMQNQRDATVLTPVTKFRSHSKYITRVLLSTDMKHLATCSADHTAR 257
Query: 159 IWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFN 218
IW E + L TL+ Q V A S+ D+ +L + SD + W+
Sbjct: 258 IWST---EQNFNLETTLQGHQRWVWDCAFSA--DSAYLVTACSDHYVRLWDLSNSETVRQ 312
Query: 219 HGGFLQGH-CFAV 230
+ G +G C A+
Sbjct: 313 YNGHHKGAVCVAL 325
Score = 58 (25.5 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 4 TGSSSTRIRVW--RQPDCVERGFIKARHG-EVRAILAHDNM--LFTTNKDCKIRIWN 55
T S ++VW R P V+R + +H V ++ H N L + ++D IR+W+
Sbjct: 117 TSSEDGTVKVWDVRSPS-VQRNY---KHQCPVNEVVIHPNQGELISCDQDGNIRVWD 169
>UNIPROTKB|J3KNP2 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AC005606
GO:GO:0006364 GO:GO:0032040 EMBL:AC005363 HGNC:HGNC:11587
Ensembl:ENST00000332704 Uniprot:J3KNP2
Length = 697
Score = 145 (56.1 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 46/196 (23%), Positives = 83/196 (42%)
Query: 14 WRQPDCVERGFIKA-RHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPR 72
W C + ++ R + ++ ++ L T ++DC +++W + +K T P
Sbjct: 297 WLFASCAKDQSVRIWRMNKAGQVMLKESFLVTGSQDCTVKLWPLPKA--LLSKN--TAPD 352
Query: 73 RSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAH 132
L TQ+ H ++ +A + LL TGS D+T K W + +C + F H
Sbjct: 353 NGPIL-LQAQTTQRCHDKDINSVAIAPNDKLLATGSQDRTAKLWAL--PQCQLLGVFSGH 409
Query: 133 ESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFD 192
+ + + D + T S+DG++K+W + T + +SV +A S
Sbjct: 410 RRGLWCVQFSPMDQVLATASADGTIKLWAL----QDFSCLKTFEGHDASVLKVAFVSRGT 465
Query: 193 NYFLYSGSSDGSINFW 208
L S SDG + W
Sbjct: 466 Q--LLSSGSDGLVKLW 479
Score = 120 (47.3 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 43/149 (28%), Positives = 68/149 (45%)
Query: 63 RTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKR 122
RT K+ LP+ FS HR + C+ F + +L T S D T+K W + D
Sbjct: 390 RTAKLWALPQCQLLGVFSG------HRRGLWCVQFSPMDQVLATASADGTIKLWALQD-- 441
Query: 123 CTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSV 182
+C+ +F H+++V + + + SDG VK+W + N TL + V
Sbjct: 442 FSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLW--TIKNNE--CVRTLDAHEDKV 497
Query: 183 NALALSSFFDNYFLYSGSSDGSINFWEKD 211
L S D++ L +G+SD + W KD
Sbjct: 498 WGLHCSRL-DDHAL-TGASDSRVILW-KD 523
Score = 51 (23.0 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 14/59 (23%), Positives = 25/59 (42%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN----MLFTTNKDCKIRIWN 55
++ TG +RVW + G V + H + +LF++ D IR+W+
Sbjct: 31 LLATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSATDAAIRVWS 89
>UNIPROTKB|G4MNI3 [details] [associations]
symbol:MGG_05616 "Pre-mRNA-splicing factor prp46"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 KO:K12862 RefSeq:XP_003710501.1
ProteinModelPortal:G4MNI3 EnsemblFungi:MGG_05616T0 GeneID:2675862
KEGG:mgr:MGG_05616 Uniprot:G4MNI3
Length = 510
Score = 143 (55.4 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 51/175 (29%), Positives = 76/175 (43%)
Query: 106 TGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYR 165
+G+ D+T+K W + R + H S V + V+ ++F+C+ D VK W
Sbjct: 218 SGAGDRTIKIWDLASGRLRL--TLTGHISTVRGLAVSPRHPYLFSCAEDKMVKCWDL--- 272
Query: 166 ENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQG 225
++ + S V LAL D L +G DG W+ S H L G
Sbjct: 273 -ETNKVIRHYHGHLSGVYTLALHPTLD--VLVTGGRDGVARVWDMRTRSN--IH--VLSG 325
Query: 226 HCFAVLCLVAIEK--LIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLA 278
H V LV E + +GS D+T+R+W A G + + VL H+ VR LA
Sbjct: 326 HTGTVSELVCQEADPQVITGSLDSTVRMWDLAAG----KTMGVLTHHKKGVRALA 376
Score = 121 (47.7 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 47/174 (27%), Positives = 76/174 (43%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H VS + A+ + TGS D TV+ W + + V H+ V A+ + + F
Sbjct: 326 HTGTVSELVCQEADPQVITGSLDSTVRMWDLAAGKTMGV--LTHHKKGVRALATHPTE-F 382
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
F S GS+K W+ E + + S +N L+++ N F +SG+ +GS++F
Sbjct: 383 TFASGSAGSIKQWK--CPEGA--FMQNFEGHNSIINTLSVND--QNVF-FSGADNGSMSF 435
Query: 208 WEKDKMSGGFN------HGGFLQGHC--FAVLCLVAIEKLIFSGSEDTTIRVWR 253
W+ K F G LQ F + +LI G D TI++W+
Sbjct: 436 WDW-KTGHRFQSLDTTAQPGSLQAESGIFTSTFDQSGSRLI-CGEADKTIKIWK 487
Score = 42 (19.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 15/65 (23%), Positives = 27/65 (41%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAI--LA-HDNM--LFTTNKDCKIRIWNF 56
+F+ + ++ W D I+ HG + + LA H + L T +D R+W+
Sbjct: 258 LFSCAEDKMVKCW---DLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGRDGVARVWDM 314
Query: 57 TVSDN 61
N
Sbjct: 315 RTRSN 319
>UNIPROTKB|I3LMJ3 [details] [associations]
symbol:LOC100738291 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50145 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004842 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00690000101849 EMBL:FP102909
Ensembl:ENSSSCT00000027206 Uniprot:I3LMJ3
Length = 512
Score = 143 (55.4 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 69/274 (25%), Positives = 112/274 (40%)
Query: 1 MVFTGSSSTRIRVWRQPDCVE-RGFIKARHGEVRAILAHDNMLFTTNKDCKIRIW---NF 56
++F+GSS I+VW + + ++ G V A+ L++ + DC I +W N
Sbjct: 252 LLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGCRLYSGSADCTIIVWDIQNL 311
Query: 57 TVSDNFRT--KKVTTLPRRSSFLSFSKSNTQQQHRDCVSC---------------MAFYH 99
+ R V TL + L FS S + D V A
Sbjct: 312 QKVNTIRAHDNPVCTLVSSHNLL-FSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVA 370
Query: 100 AEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSS-DGSVK 158
A+ LY+GS+ +T+K W + + C+ +V +I V C + + +
Sbjct: 371 AQSYLYSGSY-QTIKIWDI--RTLDCIHVLQTSGGSVYSIAVTNHH---IVCGTYENLIH 424
Query: 159 IWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFN 218
+W +E TLT + +V ALA+ S D ++S S D S+ W D M
Sbjct: 425 VWDIESKEQVRTLTGHV----GTVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQT 480
Query: 219 HGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVW 252
L H +V L +FSG+ D+T++VW
Sbjct: 481 ----LLRHQGSVTALAVSRGRLFSGAVDSTVKVW 510
Score = 117 (46.2 bits), Expect = 0.00062, P = 0.00062
Identities = 50/186 (26%), Positives = 80/186 (43%)
Query: 79 FSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCT---CVDSFVAHESN 135
F T H+ V C+ Y LL++GS DKT+K W CT C + H+
Sbjct: 228 FKCKGTFVGHQGPVWCLCVYSVGDLLFSGSSDKTIKVWDT----CTTYKCQKTLEGHDGI 283
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYF 195
V A+ + +++ S+D ++ +W +N + T++ + V L S +
Sbjct: 284 VLALCIQGCR--LYSGSADCTIIVWDI---QNLQKVN-TIRAHDNPVCTLVSS----HNL 333
Query: 196 LYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRA 255
L+SGS +I W D + L G V LVA + ++SGS T I++W
Sbjct: 334 LFSGSLK-AIKVW--DIVGTELKLKKELTGLNHWVRALVAAQSYLYSGSYQT-IKIWDIR 389
Query: 256 EGGCYH 261
C H
Sbjct: 390 TLDCIH 395
>UNIPROTKB|B3KPU1 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246 EMBL:AC009488
HOGENOM:HOG000176356 HOVERGEN:HBG000188 UniGene:Hs.185172
HGNC:HGNC:4398 EMBL:AK056750 IPI:IPI00924758 SMR:B3KPU1
STRING:B3KPU1 Ensembl:ENST00000419828 Ensembl:ENST00000427895
Uniprot:B3KPU1
Length = 240
Score = 136 (52.9 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 42/151 (27%), Positives = 71/151 (47%)
Query: 106 TGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVY- 164
+G+ D ++K W V D C +F+ HES++NA+ + G+ FT SD + R++
Sbjct: 101 SGACDASIKLWDVRDSMCR--QTFIGHESDINAVAFFPN-GYAFTTGSDDATC---RLFD 154
Query: 165 -RENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFL 223
R + L + + ++A S L +G D + N W D M G + G L
Sbjct: 155 LRADQELLMYSHDNIICGITSVAFSR--SGRLLLAGYDDFNCNIW--DAMKG--DRAGVL 208
Query: 224 QGHCFAVLCLVAIEK--LIFSGSEDTTIRVW 252
GH V CL + + +GS D+ +++W
Sbjct: 209 AGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 239
Score = 110 (43.8 bits), Expect = 0.00091, P = 0.00091
Identities = 44/180 (24%), Positives = 76/180 (42%)
Query: 129 FVAHESNVNAIVVNQDDGFVFTCSS-DGSVKIWRRVYRENSHTLTMTLKFQQSSVNALAL 187
F H +V ++ + DG F + D S+K+W R++ T +S +NA+A
Sbjct: 80 FAGHSGDVMSLSL-APDGRTFVSGACDASIKLWD--VRDSM--CRQTFIGHESDINAVA- 133
Query: 188 SSFFDN-YFLYSGSSDGSINFWE--KDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGS 244
FF N Y +GS D + ++ D+ ++H + G + +L+ +G
Sbjct: 134 --FFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICG--ITSVAFSRSGRLLLAGY 189
Query: 245 EDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
+D +W +G + VL GH V CL + + G V + S D K+W
Sbjct: 190 DDFNCNIWDAMKG----DRAGVLAGHDNRVSCLGVTDD------GMAVATGSWDSFLKIW 239
>SGD|S000004212 [details] [associations]
symbol:UTP13 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0030515 "snoRNA binding" evidence=IPI]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0032040 "small-subunit processome"
evidence=IEA;IDA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS
of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004212 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945
EMBL:U19027 GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GO:GO:0034388 HOGENOM:HOG000188765 KO:K14555
GeneTree:ENSGT00690000102183 OrthoDB:EOG4DZ53K PIR:S51445
RefSeq:NP_013323.1 ProteinModelPortal:Q05946 SMR:Q05946
DIP:DIP-4790N IntAct:Q05946 MINT:MINT-501291 STRING:Q05946
PaxDb:Q05946 PeptideAtlas:Q05946 EnsemblFungi:YLR222C GeneID:850919
KEGG:sce:YLR222C CYGD:YLR222c OMA:ADSKLIR NextBio:967338
Genevestigator:Q05946 GermOnline:YLR222C Uniprot:Q05946
Length = 817
Score = 150 (57.9 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 54/194 (27%), Positives = 87/194 (44%)
Query: 104 LYTGSFDKTVKAWRV------LDKRCTCVDSFV--AHESNVNAIVVNQDDGFVFTCSSDG 155
L T S D T+K W + +D + V + AHE ++NA+ V+ +D T S D
Sbjct: 454 LLTASNDLTIKKWIIPKPTASMDVQIIKVSEYTRHAHEKDINALSVSPNDSIFATASYDK 513
Query: 156 SVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSG 215
+ KIW EN L TL + + ++ + + L + S D ++ W D
Sbjct: 514 TCKIWNL---ENGE-LEATLANHKRGLWDVSFCQY--DKLLATSSGDKTVKIWSLDT--- 564
Query: 216 GFNHGGFLQGHCFAVL-C-LVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGP 273
F+ L+GH AV C + +K + S D I++W + G ECL LDGH
Sbjct: 565 -FSVMKTLEGHTNAVQRCSFINKQKQLISCGADGLIKIWDCSSG----ECLKTLDGHNNR 619
Query: 274 VRCLAASLEMEKVV 287
+ L+ + + +V
Sbjct: 620 LWALSTMNDGDMIV 633
Score = 39 (18.8 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 21/82 (25%), Positives = 37/82 (45%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKA--RH-GEVRA---ILAHDN-----MLFTTNKDC 49
++ +G ++ ++VW D V+R + H VR I DN L + +D
Sbjct: 162 LLASGDTNGMVKVW---DLVKRKCLHTLQEHTSAVRGLDIIEVPDNDEPSLNLLSGGRDD 218
Query: 50 KIRIWNFTVSDNFRTKKVTTLP 71
I +W+F + + K + TLP
Sbjct: 219 IINLWDFNMKK--KCKLLKTLP 238
>WB|WBGene00021074 [details] [associations]
symbol:W07E6.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003
GeneTree:ENSGT00690000102167 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH InterPro:IPR012972
Pfam:PF08154 EMBL:FO081752 PIR:T33805 RefSeq:NP_493745.1
ProteinModelPortal:Q9TYV3 SMR:Q9TYV3 STRING:Q9TYV3 PaxDb:Q9TYV3
EnsemblMetazoa:W07E6.2.1 EnsemblMetazoa:W07E6.2.2 GeneID:173439
KEGG:cel:CELE_W07E6.2 UCSC:W07E6.2 CTD:173439 WormBase:W07E6.2
InParanoid:Q9TYV3 NextBio:879659 Uniprot:Q9TYV3
Length = 473
Score = 142 (55.0 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 58/204 (28%), Positives = 88/204 (43%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V+C+ + EGL+Y+GS D+TVK WR D C + H +N + +N D
Sbjct: 236 HTASVTCLR-WGGEGLIYSGSQDRTVKMWRA-DDGVMC-RNMTGHAHWINTLALNTDYAL 292
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+C +R + + T+ K Q+ A AL L SGS D ++
Sbjct: 293 RTSCFEPS-----KRCIKPD--TVEECQKVAQTRYEA-ALE-IAGGERLVSGSDDFTLFM 343
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KLIFSGSEDTTIRVWRRAEGGCYHECLA 265
W + N + GH V +V + I S S D ++++W G + LA
Sbjct: 344 WNPKETKQSINR---MTGHMQLVNQVVFSPDTRYIASASFDKSVKLWCGRTG----KYLA 396
Query: 266 VLDGHRGPVRCLAASLEMEKVVMG 289
L GH GPV +A S + +V G
Sbjct: 397 SLRGHVGPVYQVAWSADSRLLVSG 420
Score = 130 (50.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 47/160 (29%), Positives = 75/160 (46%)
Query: 104 LYTGSFDKTVKAWRV-LDKRC-TCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWR 161
L +GS D+T++ W + L+ TC +H+S V I + D + + +G + IW
Sbjct: 120 LASGSGDQTMRIWDIELELPLHTCK----SHKSWVLCIAWSPDATKIASACKNGEICIWN 175
Query: 162 RVYRENSHTLTMTLKFQQSSVNALALSSFFDN---YFLYSGSSDGSINFWEKDKMSGGFN 218
+ + TLK + + +LA + L S DG+I W D + G
Sbjct: 176 A---KTGEQIGKTLKRHKQWITSLAWQPMHKDPTCRLLASCGKDGNIFIW--DTVQGTVV 230
Query: 219 HGGFLQGHCFAVLCLV-AIEKLIFSGSEDTTIRVWRRAEG 257
L GH +V CL E LI+SGS+D T+++WR +G
Sbjct: 231 R--CLSGHTASVTCLRWGGEGLIYSGSQDRTVKMWRADDG 268
>RGD|1359321 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta polypeptide 4" species:10116 "Rattus norvegicus" [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0044297 "cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 RGD:1359321 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
GO:GO:0044297 PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 EMBL:AY552804 EMBL:BC097370 EMBL:AF022085 IPI:IPI00422067
RefSeq:NP_001013932.1 UniGene:Rn.10844 ProteinModelPortal:O35353
SMR:O35353 IntAct:O35353 STRING:O35353 PhosphoSite:O35353
PRIDE:O35353 GeneID:294962 KEGG:rno:294962 UCSC:RGD:1359321
InParanoid:O35353 NextBio:638784 ArrayExpress:O35353
Genevestigator:O35353 Uniprot:O35353
Length = 340
Score = 123 (48.4 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 53/220 (24%), Positives = 91/220 (41%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H +SC F +G + T S D T W + + T +F H +V ++ ++ D
Sbjct: 142 HTGYLSCCRFLD-DGQIITSSGDTTCALWDIETGQQTT--TFTGHSGDVMSLSLSPDLKT 198
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDN-YFLYSGSSDGSIN 206
+ + D S K+W R+ + T S +NA+ SFF + Y +GS D +
Sbjct: 199 FVSGACDASSKLWD--IRDGMCRQSFTGHI--SDINAV---SFFPSGYAFATGSDDATCR 251
Query: 207 FWE--KDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECL 264
++ D+ ++H + G + +L+ +G +D VW +GG
Sbjct: 252 LFDLRADQELLLYSHDNIICG--ITSVAFSKSGRLLLAGYDDFNCSVWDALKGGR----A 305
Query: 265 AVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
VL GH V CL + + G V + S D ++W
Sbjct: 306 GVLAGHDNRVSCLGVTDD------GMAVATGSWDSFLRIW 339
Score = 57 (25.1 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 21/80 (26%), Positives = 42/80 (52%)
Query: 6 SSSTRIRVWRQPDCVERGFIKARH---GEVRAILA----HDN-MLFTTNKDCKIRIWNFT 57
+ +T +++ D V R ++ R G + I A +D+ +L + ++D K+ IW
Sbjct: 26 NDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIW--- 82
Query: 58 VSDNFRTKKVTTLPRRSSFL 77
D++ T K+ +P RSS++
Sbjct: 83 --DSYTTNKMHAIPLRSSWV 100
>TAIR|locus:2016214 [details] [associations]
symbol:AT1G79990 species:3702 "Arabidopsis thaliana"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006661 "phosphatidylinositol
biosynthetic process" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GO:GO:0005829 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR019185
Pfam:PF09801 IPI:IPI00537842 RefSeq:NP_178116.5 UniGene:At.22078
ProteinModelPortal:F4HQE6 SMR:F4HQE6 PRIDE:F4HQE6
EnsemblPlants:AT1G79990.1 GeneID:844339 KEGG:ath:AT1G79990
OMA:EHAVRES Uniprot:F4HQE6
Length = 1135
Score = 148 (57.2 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 48/181 (26%), Positives = 77/181 (42%)
Query: 75 SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHES 134
++ + K + H D + C+A + + + S D +K W +K C F H
Sbjct: 300 NYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWD-WEKGWLCTQIFEGHSH 358
Query: 135 NVNAIVVNQDDGFVFTCSS-DGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDN 193
V + N D F +S D ++KIW + + TL LK VN + + D
Sbjct: 359 YVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLK----GVNCVDYFTGGDK 414
Query: 194 YFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKL--IFSGSEDTTIRV 251
+L +GS D + W+ S L+GH V + +L I +GSED T+R+
Sbjct: 415 PYLITGSDDHTAKVWDYQTKSCVQT----LEGHTHNVSAVSFHPELPIIITGSEDGTVRI 470
Query: 252 W 252
W
Sbjct: 471 W 471
Score = 44 (20.5 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 53 IWNFTVSDNFRTKKVTTLPRRSS 75
IWN+ ++ VT LP RS+
Sbjct: 256 IWNYQTQTMVKSFDVTELPVRSA 278
>MGI|MGI:3042141 [details] [associations]
symbol:Traf7 "TNF receptor-associated factor 7"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=ISO] [GO:0000185 "activation of MAPKKK activity"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=ISA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=ISO] [GO:0043410 "positive regulation of MAPK cascade"
evidence=ISA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184
SMART:SM00320 UniPathway:UPA00143 MGI:MGI:3042141 Pfam:PF00097
Prosite:PS00518 GO:GO:0006915 GO:GO:0006355 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016023
GO:GO:0043410 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GO:GO:0000185 GermOnline:ENSMUSG00000052752 HOGENOM:HOG000220840
HOVERGEN:HBG055270 EMBL:BC005649 EMBL:BC008598 IPI:IPI00474463
UniGene:Mm.275150 ProteinModelPortal:Q922B6 SMR:Q922B6
STRING:Q922B6 PaxDb:Q922B6 PRIDE:Q922B6 UCSC:uc008awq.2
NextBio:377255 Bgee:Q922B6 CleanEx:MM_TRAF7 Genevestigator:Q922B6
Uniprot:Q922B6
Length = 594
Score = 143 (55.4 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 69/274 (25%), Positives = 112/274 (40%)
Query: 1 MVFTGSSSTRIRVWRQPDCVE-RGFIKARHGEVRAILAHDNMLFTTNKDCKIRIW---NF 56
++F+GSS I+VW + + ++ G V A+ L++ + DC I +W N
Sbjct: 334 LLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGCKLYSGSADCTIIVWDIQNL 393
Query: 57 TVSDNFRT--KKVTTLPRRSSFLSFSKSNTQQQHRDCVSC---------------MAFYH 99
+ R V TL + L FS S + D V A
Sbjct: 394 QKVNTIRAHDNPVCTLVSSHNML-FSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVA 452
Query: 100 AEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSS-DGSVK 158
A+ LY+GS+ +T+K W + + C+ +V +I V C + + +
Sbjct: 453 AQSYLYSGSY-QTIKIWDI--RTLDCIHVLQTSGGSVYSIAVTNHH---IVCGTYENLIH 506
Query: 159 IWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFN 218
+W +E TLT + +V ALA+ S D ++S S D S+ W D M
Sbjct: 507 VWDIESKEQVRTLTGHV----GTVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQT 562
Query: 219 HGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVW 252
L H +V L +FSG+ D+T++VW
Sbjct: 563 ----LLRHQGSVTALAVSRGRLFSGAVDSTVKVW 592
Score = 117 (46.2 bits), Expect = 0.00077, P = 0.00077
Identities = 50/186 (26%), Positives = 80/186 (43%)
Query: 79 FSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCT---CVDSFVAHESN 135
F T H+ V C+ Y LL++GS DKT+K W CT C + H+
Sbjct: 310 FKCKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDT----CTTYKCQKTLEGHDGI 365
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYF 195
V A+ + +++ S+D ++ +W +N + T++ + V L S +
Sbjct: 366 VLALCIQGCK--LYSGSADCTIIVWDI---QNLQKVN-TIRAHDNPVCTLVSS----HNM 415
Query: 196 LYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRA 255
L+SGS +I W D + L G V LVA + ++SGS T I++W
Sbjct: 416 LFSGSLK-AIKVW--DIVGTELKLKKELTGLNHWVRALVAAQSYLYSGSYQT-IKIWDIR 471
Query: 256 EGGCYH 261
C H
Sbjct: 472 TLDCIH 477
>UNIPROTKB|Q32PJ6 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9913 "Bos taurus" [GO:0097361 "CIA
complex" evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226 GO:GO:0071817
HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:BC108091 IPI:IPI00699811
RefSeq:NP_001032559.1 RefSeq:XP_003585196.1 UniGene:Bt.51463
ProteinModelPortal:Q32PJ6 STRING:Q32PJ6 Ensembl:ENSBTAT00000020797
GeneID:100850134 GeneID:540069 KEGG:bta:100850134 KEGG:bta:540069
CTD:9391 GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532
InParanoid:Q32PJ6 OrthoDB:EOG4MCX0N NextBio:20878397 GO:GO:0097361
Uniprot:Q32PJ6
Length = 339
Score = 139 (54.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 57/257 (22%), Positives = 109/257 (42%)
Query: 95 MAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFV-AHESNVNAIVVNQDDGFVFTCSS 153
+A+ A LL + D++V+ W C H+ V + + ++ + S
Sbjct: 22 LAWNPAGTLLASCGGDRSVRIWGREGDSWICKSVLCEGHQRTVRKVAWSPCGNYLASASF 81
Query: 154 DGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKM 213
D + IW++ E+ TL+ ++ V ++A + L + S D S+ WE D+
Sbjct: 82 DATTCIWKK--NEDDFECVTTLEGHENEVKSVAWAP--SGNLLATCSRDKSVWVWEVDE- 136
Query: 214 SGGFNHGGFLQGHCFAVLCLV--AIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHR 271
+ L H V +V ++L+ S S D T++++R E C A L+GH
Sbjct: 137 EDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWV--CCATLEGHE 194
Query: 272 GPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQEKTMCLDYSDYHSNSKTTT 331
V LA +++ S S D+T ++WR + +P E+ + S+ ++ K
Sbjct: 195 STVWSLAFDPSGQRLA------SCSDDRTVRIWR-QYLPGNEQGVACSGSE--ASWKCVC 245
Query: 332 TKMDYEMSPVLSPSWVE 348
T + + +W +
Sbjct: 246 TLSGFHSRTIYDVAWCQ 262
Score = 126 (49.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 43/176 (24%), Positives = 73/176 (41%)
Query: 81 KSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIV 140
KS + H+ V +A+ L + SFD T W+ + CV + HE+ V ++
Sbjct: 53 KSVLCEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNEDDFECVTTLEGHENEVKSVA 112
Query: 141 VNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGS 200
+ TCS D SV +W V E+ + L V + L S S
Sbjct: 113 WAPSGNLLATCSRDKSVWVWE-VDEEDEYECVSVLNSHTQDVKHVVWHP--SQELLASAS 169
Query: 201 SDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLV--AIEKLIFSGSEDTTIRVWRR 254
D ++ + +++ + L+GH V L + + S S+D T+R+WR+
Sbjct: 170 YDDTVKLYREEE--DDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 62/258 (24%), Positives = 108/258 (41%)
Query: 88 HRDCVSCMAFY-HAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDG 146
H + C AF H + TG+ D T + W D + T + + H + V + + D
Sbjct: 142 HGSTILCSAFAPHTSSRMVTGAGDNTARIWDC-DTQ-TPMHTLKGHYNWVLCVSWSPDGE 199
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFF-----DNYFLYSGSS 201
+ T S D ++++W ++ L L+ + +L+ L S S
Sbjct: 200 VIATGSMDNTIRLWDP---KSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSK 256
Query: 202 DGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLV-AIEKLIFSGSEDTTIRVWRRAEGGCY 260
DG+I W D +S + + GH +V C+ + L++SGS D T+RVW G
Sbjct: 257 DGTIKIW--DTVSRVCQYT--MSGHTNSVSCVKWGGQGLLYSGSHDRTVRVWDINSQG-- 310
Query: 261 HECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQEKTMCLDY 320
C+ +L H V L+ S + + +G ++ T + + K + + EK +C
Sbjct: 311 -RCINILKSHAHWVNHLSLSTDYA-LRIGAFDHTGKKPSTPEEAQKKALENYEK-ICK-- 365
Query: 321 SDYHSNSKTTTTKMDYEM 338
+ +S T DY M
Sbjct: 366 KNGNSEEMMVTASDDYTM 383
Score = 98 (39.6 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQ 143
T H + VSC+ + +GLLY+GS D+TV+ W + + + C++ +H VN + ++
Sbjct: 273 TMSGHTNSVSCVK-WGGQGLLYSGSHDRTVRVWDI-NSQGRCINILKSHAHWVNHLSLST 330
Query: 144 D 144
D
Sbjct: 331 D 331
Score = 60 (26.2 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 21/70 (30%), Positives = 33/70 (47%)
Query: 238 KLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSL 297
+ I S S D +I++W +G + ++ GH V +A S + L+ S S
Sbjct: 415 RYIVSASFDNSIKLWDGRDG----KFISTFRGHVASVYQVAWSSDCR------LLVSCSK 464
Query: 298 DQTFKVWRVK 307
D T KVW V+
Sbjct: 465 DTTLKVWDVR 474
Score = 42 (19.8 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 20/69 (28%), Positives = 35/69 (50%)
Query: 1 MVFTGSSSTRIRVW--RQPDCVE---RG---FIKARHGEVRAILAHDNM--LFTTNKDCK 50
++ TGS IR+W + C+ RG +I + E ++ + L +++KD
Sbjct: 200 VIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGT 259
Query: 51 IRIWNFTVS 59
I+IW+ TVS
Sbjct: 260 IKIWD-TVS 267
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 81/335 (24%), Positives = 133/335 (39%)
Query: 32 VRAILAHDNMLFTTNKDCKIRIWNFTVSDNF-----RTKKVTTLPR--RSSFLSFSKSNT 84
V A++ DN+L + D ++R+WN ++ T V L +++ +S S+ T
Sbjct: 295 VWAMVPWDNILVSGGCDREVRVWNMATGESIYLLRGHTSTVRCLKMSDKNTAISGSRDTT 354
Query: 85 QQ--------------QHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFV 130
+ H+ V C+A H + ++ +GS+D T + W + + R + +
Sbjct: 355 LRIWDLRTGTCRSVLVGHQASVRCLAV-HGD-IVVSGSYDTTARVWSISEGRF--LRALS 410
Query: 131 AHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSF 190
H S + AI D + T S D SV+IW N+ L+ S V L +S
Sbjct: 411 GHFSQIYAIAF--DGRRIATGSLDTSVRIWD----PNTGQCHAILQGHTSLVGQLQMSG- 463
Query: 191 FDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIR 250
D L +G SDGS+ W +M+ H L H +V L I SG D ++
Sbjct: 464 -DT--LVTGGSDGSVRVWSLTRMAP--IHR--LAAHDNSVTSLQFDNNRIVSGGSDGRVK 516
Query: 251 VWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQT-FKVWRVKVM 309
VW G E D + E EK V + SS +T +VW
Sbjct: 517 VWCLRTGQLLRELSTPSD------TVWRVTFEEEKAV----IMSSRSGRTVMEVWSFSPP 566
Query: 310 PDQEKTMCLDYSDYHSNSKTTTTKMDYEMSPVLSP 344
P+ + S S+ + + + P++ P
Sbjct: 567 PEDTEFDAATIGASSSISEPPPVRDSHPIRPLVLP 601
>RGD|1559653 [details] [associations]
symbol:Traf7 "TNF receptor-associated factor 7, E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=ISO] [GO:0000185 "activation of
MAPKKK activity" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006915 "apoptotic process" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0042981 "regulation of apoptotic
process" evidence=ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0043410 "positive regulation of MAPK
cascade" evidence=ISO] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Pfam:PF00097 RGD:1559653 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 IPI:IPI00198753 ProteinModelPortal:D4A5P7
Ensembl:ENSRNOT00000004222 UCSC:RGD:1559653 ArrayExpress:D4A5P7
Uniprot:D4A5P7
Length = 629
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 69/274 (25%), Positives = 112/274 (40%)
Query: 1 MVFTGSSSTRIRVWRQPDCVE-RGFIKARHGEVRAILAHDNMLFTTNKDCKIRIW---NF 56
++F+GSS I+VW + + ++ G V A+ L++ + DC I +W N
Sbjct: 369 LLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGCKLYSGSADCTIIVWDIQNL 428
Query: 57 TVSDNFRT--KKVTTLPRRSSFLSFSKSNTQQQHRDCVSC---------------MAFYH 99
+ R V TL + L FS S + D V A
Sbjct: 429 QKVNTIRAHDNPVCTLVSSHNML-FSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVA 487
Query: 100 AEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSS-DGSVK 158
A+ LY+GS+ +T+K W + + C+ +V +I V C + + +
Sbjct: 488 AQSYLYSGSY-QTIKIWDI--RTLDCIHVLQTSGGSVYSIAVTNHH---IVCGTYENLIH 541
Query: 159 IWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFN 218
+W +E TLT + +V ALA+ S D ++S S D S+ W D M
Sbjct: 542 VWDIESKEQVRTLTGHV----GTVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQT 597
Query: 219 HGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVW 252
L H +V L +FSG+ D+T++VW
Sbjct: 598 ----LLRHQGSVTALAVSRGRLFSGAVDSTVKVW 627
Score = 117 (46.2 bits), Expect = 0.00083, P = 0.00083
Identities = 50/186 (26%), Positives = 80/186 (43%)
Query: 79 FSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCT---CVDSFVAHESN 135
F T H+ V C+ Y LL++GS DKT+K W CT C + H+
Sbjct: 345 FKCKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDT----CTTYKCQKTLEGHDGI 400
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYF 195
V A+ + +++ S+D ++ +W +N + T++ + V L S +
Sbjct: 401 VLALCIQGCK--LYSGSADCTIIVWDI---QNLQKVN-TIRAHDNPVCTLVSS----HNM 450
Query: 196 LYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRA 255
L+SGS +I W D + L G V LVA + ++SGS T I++W
Sbjct: 451 LFSGSLK-AIKVW--DIVGTELKLKKELTGLNHWVRALVAAQSYLYSGSYQT-IKIWDIR 506
Query: 256 EGGCYH 261
C H
Sbjct: 507 TLDCIH 512
>CGD|CAL0002484 [details] [associations]
symbol:CDC4 species:5476 "Candida albicans" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IGI] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0043224 "nuclear SCF ubiquitin
ligase complex" evidence=IGI] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IGI] [GO:0000086 "G2/M transition of
mitotic cell cycle" evidence=IGI] [GO:0044182 "filamentous growth
of a population of unicellular organisms" evidence=IMP] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0007126 "meiosis" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0030674 "protein binding, bridging" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0002484
GO:GO:0000086 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000082 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0004842 GO:GO:0042787 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0044182 KO:K03361 GO:GO:0043224
RefSeq:XP_718226.1 RefSeq:XP_718322.1 ProteinModelPortal:Q5A9A6
STRING:Q5A9A6 GeneID:3640007 GeneID:3640125 KEGG:cal:CaO19.10091
KEGG:cal:CaO19.2559 Uniprot:Q5A9A6
Length = 768
Score = 144 (55.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 72/297 (24%), Positives = 120/297 (40%)
Query: 25 IKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSDNFRT-KKVTTLPRRSSFLSFSKSN 83
++ G V A+ N L T + D +R+WN + T+ R + +
Sbjct: 445 LEGHEGGVWALKYTGNTLVTGSTDRTVRVWNMKTGQCTHIFRGHTSTIRCLDIIHPAVIG 504
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWR--VLDKRCTCVDSFVAHESNVNAIVV 141
Q D V + LL TGS D + W+ V+D +++F N I V
Sbjct: 505 KNQDGEDIV-----FPEYPLLITGSRDHNIHVWKLPVVDDSQDYIETFEGEFDNPYLIAV 559
Query: 142 ----NQD----DGF---VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSF 190
Q G+ + + S D +V++W + ++ H T L+ V + A+
Sbjct: 560 LSGHTQSVRSISGYGNIIISGSYDSTVRVWDLL--DDGHC-THVLQGHLDRVYSTAID-- 614
Query: 191 FDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIR 250
F + +SGS D +IN W + +G L GH V L ++ ++ S + D T+R
Sbjct: 615 FHSKTCFSGSMDSNINVWNFE--TGELKK--VLVGHASLVGLLDLVDDVLVSAAADATLR 670
Query: 251 VWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
+W G E + L GH + C E + G V S S ++ K+W V+
Sbjct: 671 IWDAKTG----ELRSKLKGHGAAITCF----EHD----GLRVVSGS-EKMLKLWNVE 714
>UNIPROTKB|Q5A9A6 [details] [associations]
symbol:CDC4 "Potential ubiquitin ligase F-box subunit"
species:237561 "Candida albicans SC5314" [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IGI] [GO:0000086 "G2/M
transition of mitotic cell cycle" evidence=IGI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IGI] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IGI] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IGI] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0002484
GO:GO:0000086 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000082 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0004842 GO:GO:0042787 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0044182 KO:K03361 GO:GO:0043224
RefSeq:XP_718226.1 RefSeq:XP_718322.1 ProteinModelPortal:Q5A9A6
STRING:Q5A9A6 GeneID:3640007 GeneID:3640125 KEGG:cal:CaO19.10091
KEGG:cal:CaO19.2559 Uniprot:Q5A9A6
Length = 768
Score = 144 (55.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 72/297 (24%), Positives = 120/297 (40%)
Query: 25 IKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSDNFRT-KKVTTLPRRSSFLSFSKSN 83
++ G V A+ N L T + D +R+WN + T+ R + +
Sbjct: 445 LEGHEGGVWALKYTGNTLVTGSTDRTVRVWNMKTGQCTHIFRGHTSTIRCLDIIHPAVIG 504
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWR--VLDKRCTCVDSFVAHESNVNAIVV 141
Q D V + LL TGS D + W+ V+D +++F N I V
Sbjct: 505 KNQDGEDIV-----FPEYPLLITGSRDHNIHVWKLPVVDDSQDYIETFEGEFDNPYLIAV 559
Query: 142 ----NQD----DGF---VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSF 190
Q G+ + + S D +V++W + ++ H T L+ V + A+
Sbjct: 560 LSGHTQSVRSISGYGNIIISGSYDSTVRVWDLL--DDGHC-THVLQGHLDRVYSTAID-- 614
Query: 191 FDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIR 250
F + +SGS D +IN W + +G L GH V L ++ ++ S + D T+R
Sbjct: 615 FHSKTCFSGSMDSNINVWNFE--TGELKK--VLVGHASLVGLLDLVDDVLVSAAADATLR 670
Query: 251 VWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
+W G E + L GH + C E + G V S S ++ K+W V+
Sbjct: 671 IWDAKTG----ELRSKLKGHGAAITCF----EHD----GLRVVSGS-EKMLKLWNVE 714
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 37/126 (29%), Positives = 62/126 (49%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V+C F+ + TGS D+TV+ W VL+ C + F H+ ++++ + + F
Sbjct: 606 HLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRI--FTGHKGPIHSLAFSPNGRF 663
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTM-TLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
+ T ++DG V +W + H L + LK ++ AL S D L SGS D ++
Sbjct: 664 LATGATDGRVLLW-----DIGHGLMVGELKGHTDTIYALRFSR--DGEILASGSMDNTVR 716
Query: 207 FWEKDK 212
W+ K
Sbjct: 717 LWDAVK 722
Score = 129 (50.5 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 41/167 (24%), Positives = 65/167 (38%)
Query: 117 RVLDKRCTC-VDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTL 175
R++D++ + H V + D ++ +CS DG+V++W + T +
Sbjct: 506 RIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSL----QTFTCLVGY 561
Query: 176 KFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLC--L 233
K V S + Y+ SG D W D + GH V C
Sbjct: 562 KGHNYPVWDTQFSPY--GYYFVSGGHDRVARLWATDH----YQPLRIFAGHLADVTCTRF 615
Query: 234 VAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAAS 280
I +GS D T+R+W G C + + GH+GP+ LA S
Sbjct: 616 HPNSNYIATGSADRTVRLWDVLNGNC----VRIFTGHKGPIHSLAFS 658
Score = 41 (19.5 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 104 LYTGSF-DKTVKAWRVLDKRCTCV 126
+ G F D TV+ W V K+ V
Sbjct: 464 MIVGGFADSTVRVWSVTPKKLRSV 487
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 53/217 (24%), Positives = 94/217 (43%)
Query: 42 LFTTNKDCKIRIWNFTVSD-NFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHA 100
+F ++ KIR +F+ +D + + + F ++ N H V C++++
Sbjct: 203 IFKAHEQSKIRGLSFSPTDLKLASCADDKIIKIWDFARCTEDNQLVGHGWDVKCVSWHPQ 262
Query: 101 EGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW 160
+ L+ +G D +K W K + + H+S V+ + NQ+ ++ + SSD +K++
Sbjct: 263 KSLIVSGGKDNNIKIWDA--KSSQNITTLHGHKSTVSKVEWNQNGNWIVSASSDQLLKVF 320
Query: 161 R-RVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNH 219
R +E T K V ALAL + ++ F+ SG DG I +W +
Sbjct: 321 DIRTMKE-----MQTFKGHGKEVTALALHPYHEDLFV-SGDKDGKILYWI---VGNPEPQ 371
Query: 220 GGFLQGHCFAVLCLV--AIEKLIFSGSEDTTIRVWRR 254
H V L I ++ SGS D T + W R
Sbjct: 372 AEIHSAHDADVWSLSWHPIGHILASGSNDHTTKFWSR 408
>UNIPROTKB|E2QXW8 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000185 "activation of MAPKKK activity" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Pfam:PF00097 Prosite:PS00518 GO:GO:0043231 GO:GO:0005886
GO:GO:0006915 GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043410 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 InterPro:IPR017907
SUPFAM:SSF49599 Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849
GO:GO:0000185 CTD:84231 KO:K10646 OMA:ALCIQGN EMBL:AAEX03004625
RefSeq:XP_852015.1 ProteinModelPortal:E2QXW8
Ensembl:ENSCAFT00000030876 GeneID:609824 KEGG:cfa:609824
NextBio:20895405 Uniprot:E2QXW8
Length = 670
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 69/274 (25%), Positives = 112/274 (40%)
Query: 1 MVFTGSSSTRIRVWRQPDCVE-RGFIKARHGEVRAILAHDNMLFTTNKDCKIRIW---NF 56
++F+GSS I+VW + + ++ G V A+ L++ + DC I +W N
Sbjct: 410 LLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGCKLYSGSADCTIIVWDIQNL 469
Query: 57 TVSDNFRT--KKVTTLPRRSSFLSFSKSNTQQQHRDCVSC---------------MAFYH 99
+ R V TL + L FS S + D V A
Sbjct: 470 QKVNTIRAHDNPVCTLVSSHNML-FSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVA 528
Query: 100 AEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSS-DGSVK 158
A+ LY+GS+ +T+K W + + C+ +V +I V C + + +
Sbjct: 529 AQSYLYSGSY-QTIKIWDI--RTLDCIHVLQTSGGSVYSIAVTNHH---IVCGTYENLIH 582
Query: 159 IWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFN 218
+W +E TLT + +V ALA+ S D ++S S D S+ W D M
Sbjct: 583 VWDIESKEQVRTLTGHV----GTVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQT 638
Query: 219 HGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVW 252
L H +V L +FSG+ D+T++VW
Sbjct: 639 ----LLRHQGSVTALAVSRGRLFSGAVDSTVKVW 668
Score = 117 (46.2 bits), Expect = 0.00090, P = 0.00090
Identities = 50/186 (26%), Positives = 80/186 (43%)
Query: 79 FSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCT---CVDSFVAHESN 135
F T H+ V C+ Y LL++GS DKT+K W CT C + H+
Sbjct: 386 FKCKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDT----CTTYKCQKTLEGHDGI 441
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYF 195
V A+ + +++ S+D ++ +W +N + T++ + V L S +
Sbjct: 442 VLALCIQGCK--LYSGSADCTIIVWDI---QNLQKVN-TIRAHDNPVCTLVSS----HNM 491
Query: 196 LYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRA 255
L+SGS +I W D + L G V LVA + ++SGS T I++W
Sbjct: 492 LFSGSLK-AIKVW--DIVGTELKLKKELTGLNHWVRALVAAQSYLYSGSYQT-IKIWDIR 547
Query: 256 EGGCYH 261
C H
Sbjct: 548 TLDCIH 553
>UNIPROTKB|F1RFA9 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184
SMART:SM00320 Pfam:PF00097 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 CTD:84231 KO:K10646
OMA:ALCIQGN EMBL:FP102350 RefSeq:XP_003124781.1 UniGene:Ssc.21218
Ensembl:ENSSSCT00000008814 GeneID:100516964 KEGG:ssc:100516964
Uniprot:F1RFA9
Length = 670
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 69/274 (25%), Positives = 112/274 (40%)
Query: 1 MVFTGSSSTRIRVWRQPDCVE-RGFIKARHGEVRAILAHDNMLFTTNKDCKIRIW---NF 56
++F+GSS I+VW + + ++ G V A+ L++ + DC I +W N
Sbjct: 410 LLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGCRLYSGSADCTIIVWDIQNL 469
Query: 57 TVSDNFRT--KKVTTLPRRSSFLSFSKSNTQQQHRDCVSC---------------MAFYH 99
+ R V TL + L FS S + D V A
Sbjct: 470 QKVNTIRAHDNPVCTLVSSHNLL-FSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVA 528
Query: 100 AEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSS-DGSVK 158
A+ LY+GS+ +T+K W + + C+ +V +I V C + + +
Sbjct: 529 AQSYLYSGSY-QTIKIWDI--RTLDCIHVLQTSGGSVYSIAVTNHH---IVCGTYENLIH 582
Query: 159 IWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFN 218
+W +E TLT + +V ALA+ S D ++S S D S+ W D M
Sbjct: 583 VWDIESKEQVRTLTGHV----GTVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQT 638
Query: 219 HGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVW 252
L H +V L +FSG+ D+T++VW
Sbjct: 639 ----LLRHQGSVTALAVSRGRLFSGAVDSTVKVW 668
Score = 117 (46.2 bits), Expect = 0.00090, P = 0.00090
Identities = 50/186 (26%), Positives = 80/186 (43%)
Query: 79 FSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCT---CVDSFVAHESN 135
F T H+ V C+ Y LL++GS DKT+K W CT C + H+
Sbjct: 386 FKCKGTFVGHQGPVWCLCVYSVGDLLFSGSSDKTIKVWDT----CTTYKCQKTLEGHDGI 441
Query: 136 VNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYF 195
V A+ + +++ S+D ++ +W +N + T++ + V L S +
Sbjct: 442 VLALCIQGCR--LYSGSADCTIIVWDI---QNLQKVN-TIRAHDNPVCTLVSS----HNL 491
Query: 196 LYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRA 255
L+SGS +I W D + L G V LVA + ++SGS T I++W
Sbjct: 492 LFSGSLK-AIKVW--DIVGTELKLKKELTGLNHWVRALVAAQSYLYSGSYQT-IKIWDIR 547
Query: 256 EGGCYH 261
C H
Sbjct: 548 TLDCIH 553
>MGI|MGI:104581 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta 4" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISA] [GO:0006184 "GTP catabolic process" evidence=ISA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0044297 "cell body" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 MGI:MGI:104581
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 OMA:GACDATS EMBL:S86124 EMBL:M87286 EMBL:M63658
EMBL:AF277893 EMBL:AF501886 EMBL:AK036816 EMBL:AK152227
EMBL:AK167416 EMBL:BC028753 IPI:IPI00310220 PIR:JS0669
RefSeq:NP_038559.2 UniGene:Mm.139192 ProteinModelPortal:P29387
SMR:P29387 DIP:DIP-604N IntAct:P29387 STRING:P29387
PhosphoSite:P29387 REPRODUCTION-2DPAGE:P29387 PaxDb:P29387
PRIDE:P29387 Ensembl:ENSMUST00000108234 Ensembl:ENSMUST00000155737
GeneID:14696 KEGG:mmu:14696 InParanoid:P29387 NextBio:286647
Bgee:P29387 Genevestigator:P29387 GermOnline:ENSMUSG00000027669
Uniprot:P29387
Length = 340
Score = 122 (48.0 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 53/220 (24%), Positives = 91/220 (41%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H +SC F +G + T S D T W + + T +F H +V ++ ++ D
Sbjct: 142 HTGYLSCCRFLD-DGQIITSSGDTTCALWDIETGQQTT--TFTGHSGDVMSLSLSPDLKT 198
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDN-YFLYSGSSDGSIN 206
+ + D S K+W R+ + T S +NA+ SFF + Y +GS D +
Sbjct: 199 FVSGACDASSKLWD--IRDGMCRQSFTGHI--SDINAV---SFFPSGYAFATGSDDATCR 251
Query: 207 FWE--KDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECL 264
++ D+ ++H + G + +L+ +G +D VW +GG
Sbjct: 252 LFDLRADQELLLYSHDNIICG--ITSVAFSKSGRLLLAGYDDFNCSVWDALKGGRS---- 305
Query: 265 AVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
VL GH V CL + + G V + S D ++W
Sbjct: 306 GVLAGHDNRVSCLGVTDD------GMAVATGSWDSFLRIW 339
Score = 57 (25.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 21/80 (26%), Positives = 42/80 (52%)
Query: 6 SSSTRIRVWRQPDCVERGFIKARH---GEVRAILA----HDN-MLFTTNKDCKIRIWNFT 57
+ +T +++ D V R ++ R G + I A +D+ +L + ++D K+ IW
Sbjct: 26 NDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIW--- 82
Query: 58 VSDNFRTKKVTTLPRRSSFL 77
D++ T K+ +P RSS++
Sbjct: 83 --DSYTTNKMHAIPLRSSWV 100
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 131 (51.2 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 58/260 (22%), Positives = 104/260 (40%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDNMLFTTN--KDCKIRIWNFTVS 59
V G+ + I V+ IKA G V +++ ++ T+ D ++ W+F +
Sbjct: 450 VIVGTKTGTIEVFELASAARVASIKAHEGSVWSLVLTPDLRGVTSGGADKLVKFWDFELI 509
Query: 60 DNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEG-LLYTGSFDKTVKAWRV 118
+ K L+ S + T + D ++ Y A+ L D TVK +
Sbjct: 510 ASQENSK-------HKVLNLSLTKTLKVESDVLALK--YSADNKFLAVSLLDNTVKIFYT 560
Query: 119 LDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQ 178
+ S H+ V + ++ D + T S+D ++KIW Y + H F
Sbjct: 561 DTVKFHL--SLYGHKLPVMCLDISDDSTLIITGSADKNIKIWGLDYGD-CHK-----SFF 612
Query: 179 QSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAV--LCLVAI 236
+ + +S + S S D I +W+ DK F H ++ H V L + ++
Sbjct: 613 AHDDSIMQVSFIPSTHHFISASKDKRIKYWDADK----FEHIQTIEAHHGEVWSLAMGSV 668
Query: 237 EKLIFSGSEDTTIRVWRRAE 256
SGS D +IR++ + E
Sbjct: 669 GDFFISGSHDRSIRIFNQTE 688
Score = 125 (49.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 57/185 (30%), Positives = 86/185 (46%)
Query: 94 CMAFYHAEGLLYT--GSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTC 151
C F A G L+ G+ T++ + + V S AHE +V ++V+ D V +
Sbjct: 440 CTVF--APGNLHVIVGTKTGTIEVFELAS--AARVASIKAHEGSVWSLVLTPDLRGVTSG 495
Query: 152 SSDGSVKIWRR---VYRENS-H-----TLTMTLKFQQSSVNALALSSFFDNYFLYSGSSD 202
+D VK W +ENS H +LT TLK + S V AL S+ DN FL D
Sbjct: 496 GADKLVKFWDFELIASQENSKHKVLNLSLTKTLKVE-SDVLALKYSA--DNKFLAVSLLD 552
Query: 203 GSINFWEKDKMSGGFNHGGFLQGHCFAVLCL-VAIEK-LIFSGSEDTTIRVWRRAEGGCY 260
++ + D + F+ L GH V+CL ++ + LI +GS D I++W G C+
Sbjct: 553 NTVKIFYTDTVK--FHLS--LYGHKLPVMCLDISDDSTLIITGSADKNIKIWGLDYGDCH 608
Query: 261 HECLA 265
A
Sbjct: 609 KSFFA 613
Score = 66 (28.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 26/108 (24%), Positives = 50/108 (46%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAH--DNMLFTTNKDCKIRIWNF-T 57
++ +G S IR+W D + G V + + N+L + +KD ++ +W+ T
Sbjct: 73 LLASGYSDGSIRIWSMSDYQLQAVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIIT 132
Query: 58 VSDNFRTK----KVTT---LPRRSSFLSFSKS------NTQQQHRDCV 92
S FR + ++T+ L R + ++ SK +T+ QH C+
Sbjct: 133 ESGLFRLRGHRDQITSVKLLERSNHLITSSKDGFIKIWDTETQH--CI 178
>ZFIN|ZDB-GENE-061110-97 [details] [associations]
symbol:zgc:154085 "zgc:154085" species:7955 "Danio
rerio" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 ZFIN:ZDB-GENE-061110-97 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 EMBL:CABZ01026183 EMBL:CABZ01026184 EMBL:CABZ01048063
EMBL:CABZ01048064 EMBL:FP236277 IPI:IPI00993801
Ensembl:ENSDART00000128024 ArrayExpress:E7F9P4 Bgee:E7F9P4
Uniprot:E7F9P4
Length = 487
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 59/230 (25%), Positives = 89/230 (38%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQ 143
T Q HRD V+C+AF + LL T S DK++ + D H V+ +
Sbjct: 7 TLQSHRDDVNCVAF--SGDLLATCSADKSICVYSSRDFSELPFSPLSGHGYGVHCCCFSA 64
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
++ +CS+D + +W E L +S V A S D+ L SG SDG
Sbjct: 65 CGQYLASCSTDATTMVWSMDTGEIEAVLEHP---GRSPVRVCAFSP--DSSHLVSGGSDG 119
Query: 204 SINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHEC 263
SI W D S G + ++ +GS +R+W + E
Sbjct: 120 SIALW--DFTSRTLRRTGVVNDTSIVACSFTPCGQMFITGSTYGDLRLWDLNMNHLHAE- 176
Query: 264 LAVLDGHRGPVRCLAASLEMEKVVMG---FLVYSSSLDQTFKVWRVKVMP 310
+ H V C + +M K G F + S D K+W V ++P
Sbjct: 177 ---KNAHDLGVSCAQFAPKMMKGTDGCVQFRLASCGQDSLLKIWIVSLLP 223
>ZFIN|ZDB-GENE-040426-2787 [details] [associations]
symbol:plrg1 "pleiotropic regulator 1"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043518 "negative regulation of DNA
damage response, signal transduction by p53 class mediator"
evidence=IGI;IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2787 GO:GO:0043066
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518
GeneTree:ENSGT00700000104496 EMBL:AL935184 IPI:IPI00993121
ProteinModelPortal:F1R5Z8 Ensembl:ENSDART00000125834
ArrayExpress:F1R5Z8 Bgee:F1R5Z8 Uniprot:F1R5Z8
Length = 519
Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 57/216 (26%), Positives = 83/216 (38%)
Query: 65 KKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCT 124
+K T+P+ + H V +A TGS D+T+K W + +
Sbjct: 184 RKAPTMPKPQWHPPWKLYRVISGHLGWVRSIAVEPGNQWFVTGSADRTIKIWDLASGKLK 243
Query: 125 CVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNA 184
S H S V + V+ ++F+C D VK W Y + + S+V
Sbjct: 244 L--SLTGHISTVRGVAVSNRSPYLFSCGEDKQVKCWDLEYNK----VIRHYHGHLSAVYD 297
Query: 185 LALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVL---CLVAIEKLIF 241
L L D L + S D + W D + H L GH V C A +++
Sbjct: 298 LDLHPTID--VLVTCSRDATARVW--DIRTKANVHT--LSGHTNTVATVKCQSAEPQVVT 351
Query: 242 SGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCL 277
GS DTTIR+W G + A L H+ VR L
Sbjct: 352 VGSHDTTIRLWDLVAG----KTRATLTNHKKSVRAL 383
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 140 (54.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 55/203 (27%), Positives = 90/203 (44%)
Query: 80 SKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVD-SFVAHESNVNA 138
S ++T HRD V+C+AF+ L +GS D T+K W D ++ + H V+
Sbjct: 105 SSTHTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIW---DWELGEIERTLKGHIRGVSG 161
Query: 139 IVVNQDDG--FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFL 196
+ G + +CSSD ++K+W + TL SV+++ + DN+ L
Sbjct: 162 LDYGGQKGNTLLASCSSDLTIKLWDP---SKDYANIRTLSGHDHSVSSVRFLTSNDNH-L 217
Query: 197 YSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE---KLIFSGSEDTTIRVWR 253
S S DG++ W+ +S GF ++ + + V+ K + SG D I VW
Sbjct: 218 ISASRDGTLRIWD---VSTGFCVK-VIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWE 273
Query: 254 RAEGGCYHECLAVLDGHRGPVRC 276
+ E A L GH + C
Sbjct: 274 VSSA----EPKAALLGHENFIEC 292
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 140 (54.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 55/203 (27%), Positives = 90/203 (44%)
Query: 80 SKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVD-SFVAHESNVNA 138
S ++T HRD V+C+AF+ L +GS D T+K W D ++ + H V+
Sbjct: 105 SSTHTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIW---DWELGEIERTLKGHIRGVSG 161
Query: 139 IVVNQDDG--FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFL 196
+ G + +CSSD ++K+W + TL SV+++ + DN+ L
Sbjct: 162 LDYGGQKGNTLLASCSSDLTIKLWDP---SKDYANIRTLSGHDHSVSSVRFLTSNDNH-L 217
Query: 197 YSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE---KLIFSGSEDTTIRVWR 253
S S DG++ W+ +S GF ++ + + V+ K + SG D I VW
Sbjct: 218 ISASRDGTLRIWD---VSTGFCVK-VIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWE 273
Query: 254 RAEGGCYHECLAVLDGHRGPVRC 276
+ E A L GH + C
Sbjct: 274 VSSA----EPKAALLGHENFIEC 292
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 142 (55.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 48/189 (25%), Positives = 87/189 (46%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRA-ILAHDNMLFTTNKDCK-IRIWNFTVS 59
+ + S +++WR D VR+ +++ D L + D K + +W+
Sbjct: 146 LLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDMRLVASGSDDKTVMLWDL--- 202
Query: 60 DNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGL-LYTGSFDKTVKAWRV 118
NF+ K V+ + S+ N+ H D VS + F H +G L + SFD +K +
Sbjct: 203 -NFQ-KIVSKYSTLDDNVKISQINSYSDHMDTVSQVLF-HPDGTCLISSSFDHKIKITDI 259
Query: 119 LDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW-----RRVYR--ENSHTL 171
+ + + AH++ VN+I ++ F+ + SD +KIW R++Y N +
Sbjct: 260 RSNKL--IQHYNAHDAQVNSISIHPTGYFLASAGSDSKIKIWDLRQGRQIYTLYSNDKDI 317
Query: 172 TMTLKFQQS 180
T T++F QS
Sbjct: 318 T-TVQFNQS 325
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 122 (48.0 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 52/220 (23%), Positives = 88/220 (40%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H +SC F + + T S D T W + + T +F H +V ++ + D
Sbjct: 142 HTGYLSCCRFLD-DNQIVTSSGDTTCALWDIETGQQTT--TFTGHTGDVMSLSLAPDTRL 198
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYS-GSSDGSIN 206
+ + D S K+W RE T T +S +NA+ FF N ++ GS D +
Sbjct: 199 FVSGACDASAKLWD--VREGMCRQTFT--GHESDINAIC---FFPNGNAFATGSDDATCR 251
Query: 207 FWE--KDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECL 264
++ D+ ++H + G + +L+ +G +D VW + +
Sbjct: 252 LFDLRADQELMTYSHDNIICG--ITSVSFSKSGRLLLAGYDDFNCNVWDALKA----DRA 305
Query: 265 AVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
VL GH V CL + + G V + S D K+W
Sbjct: 306 GVLAGHDNRVSCLGVTDD------GMAVATGSWDSFLKIW 339
Score = 56 (24.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 41 MLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFL 77
+L + ++D K+ IW D++ T KV +P RSS++
Sbjct: 69 LLVSASQDGKLIIW-----DSYTTNKVHAIPLRSSWV 100
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 122 (48.0 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 52/220 (23%), Positives = 88/220 (40%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H +SC F + + T S D T W + + T +F H +V ++ + D
Sbjct: 142 HTGYLSCCRFLD-DNQIVTSSGDTTCALWDIETGQQTT--TFTGHTGDVMSLSLAPDTRL 198
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYS-GSSDGSIN 206
+ + D S K+W RE T T +S +NA+ FF N ++ GS D +
Sbjct: 199 FVSGACDASAKLWD--VREGMCRQTFT--GHESDINAIC---FFPNGNAFATGSDDATCR 251
Query: 207 FWE--KDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECL 264
++ D+ ++H + G + +L+ +G +D VW + +
Sbjct: 252 LFDLRADQELMTYSHDNIICG--ITSVSFSKSGRLLLAGYDDFNCNVWDALKA----DRA 305
Query: 265 AVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
VL GH V CL + + G V + S D K+W
Sbjct: 306 GVLAGHDNRVSCLGVTDD------GMAVATGSWDSFLKIW 339
Score = 56 (24.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 41 MLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFL 77
+L + ++D K+ IW D++ T KV +P RSS++
Sbjct: 69 LLVSASQDGKLIIW-----DSYTTNKVHAIPLRSSWV 100
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 122 (48.0 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 52/220 (23%), Positives = 88/220 (40%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H +SC F + + T S D T W + + T +F H +V ++ + D
Sbjct: 142 HTGYLSCCRFLD-DNQIVTSSGDTTCALWDIETGQQTT--TFTGHTGDVMSLSLAPDTRL 198
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYS-GSSDGSIN 206
+ + D S K+W RE T T +S +NA+ FF N ++ GS D +
Sbjct: 199 FVSGACDASAKLWD--VREGMCRQTFT--GHESDINAIC---FFPNGNAFATGSDDATCR 251
Query: 207 FWE--KDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECL 264
++ D+ ++H + G + +L+ +G +D VW + +
Sbjct: 252 LFDLRADQELMTYSHDNIICG--ITSVSFSKSGRLLLAGYDDFNCNVWDALKA----DRA 305
Query: 265 AVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
VL GH V CL + + G V + S D K+W
Sbjct: 306 GVLAGHDNRVSCLGVTDD------GMAVATGSWDSFLKIW 339
Score = 56 (24.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 41 MLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFL 77
+L + ++D K+ IW D++ T KV +P RSS++
Sbjct: 69 LLVSASQDGKLIIW-----DSYTTNKVHAIPLRSSWV 100
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 122 (48.0 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 52/220 (23%), Positives = 88/220 (40%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H +SC F + + T S D T W + + T +F H +V ++ + D
Sbjct: 142 HTGYLSCCRFLD-DNQIVTSSGDTTCALWDIETGQQTT--TFTGHTGDVMSLSLAPDTRL 198
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYS-GSSDGSIN 206
+ + D S K+W RE T T +S +NA+ FF N ++ GS D +
Sbjct: 199 FVSGACDASAKLWD--VREGMCRQTFT--GHESDINAIC---FFPNGNAFATGSDDATCR 251
Query: 207 FWE--KDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECL 264
++ D+ ++H + G + +L+ +G +D VW + +
Sbjct: 252 LFDLRADQELMTYSHDNIICG--ITSVSFSKSGRLLLAGYDDFNCNVWDALKA----DRA 305
Query: 265 AVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
VL GH V CL + + G V + S D K+W
Sbjct: 306 GVLAGHDNRVSCLGVTDD------GMAVATGSWDSFLKIW 339
Score = 56 (24.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 41 MLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFL 77
+L + ++D K+ IW D++ T KV +P RSS++
Sbjct: 69 LLVSASQDGKLIIW-----DSYTTNKVHAIPLRSSWV 100
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 122 (48.0 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 52/220 (23%), Positives = 88/220 (40%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H +SC F + + T S D T W + + T +F H +V ++ + D
Sbjct: 142 HTGYLSCCRFLD-DNQIVTSSGDTTCALWDIETGQQTT--TFTGHTGDVMSLSLAPDTRL 198
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYS-GSSDGSIN 206
+ + D S K+W RE T T +S +NA+ FF N ++ GS D +
Sbjct: 199 FVSGACDASAKLWD--VREGMCRQTFT--GHESDINAIC---FFPNGNAFATGSDDATCR 251
Query: 207 FWE--KDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECL 264
++ D+ ++H + G + +L+ +G +D VW + +
Sbjct: 252 LFDLRADQELMTYSHDNIICG--ITSVSFSKSGRLLLAGYDDFNCNVWDALKA----DRA 305
Query: 265 AVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
VL GH V CL + + G V + S D K+W
Sbjct: 306 GVLAGHDNRVSCLGVTDD------GMAVATGSWDSFLKIW 339
Score = 56 (24.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 41 MLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFL 77
+L + ++D K+ IW D++ T KV +P RSS++
Sbjct: 69 LLVSASQDGKLIIW-----DSYTTNKVHAIPLRSSWV 100
>ZFIN|ZDB-GENE-040426-2855 [details] [associations]
symbol:gnb1b "guanine nucleotide binding protein
(G protein), beta polypeptide 1b" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-040426-2855 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU207276 EMBL:CR854824 EMBL:BC044482
EMBL:BC152684 IPI:IPI00483806 RefSeq:NP_998646.1
RefSeq:XP_003198887.1 UniGene:Dr.26330 SMR:Q803H5 STRING:Q803H5
Ensembl:ENSDART00000015309 Ensembl:ENSDART00000084989
Ensembl:ENSDART00000136035 GeneID:100537780 GeneID:406796
KEGG:dre:100537780 KEGG:dre:406796 CTD:406796 InParanoid:Q803H5
NextBio:20818306 Uniprot:Q803H5
Length = 340
Score = 122 (48.0 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 52/220 (23%), Positives = 88/220 (40%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H +SC F + + T S D T W + + T +F H +V ++ + D
Sbjct: 142 HTGYLSCCRFLD-DNQIVTSSGDTTCALWDIETGQQTT--TFAGHTGDVMSLSLAPDTRL 198
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYS-GSSDGSIN 206
+ + D S K+W RE T T +S +NA+ FF N ++ GS D +
Sbjct: 199 FVSGACDASAKLWD--IREGMCRQTFT--GHESDINAIC---FFPNGNAFATGSDDATCR 251
Query: 207 FWE--KDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECL 264
++ D+ ++H + G + +L+ +G +D VW + +
Sbjct: 252 LFDLRADQELMVYSHDNIICG--ITSVAFSKSGRLLLAGYDDFNCNVWDTLKA----DRA 305
Query: 265 AVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
VL GH V CL + + G V + S D K+W
Sbjct: 306 GVLAGHDNRVSCLGVTDD------GMAVATGSWDSFLKIW 339
Score = 56 (24.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 41 MLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFL 77
+L + ++D K+ IW D++ T KV +P RSS++
Sbjct: 69 LLVSASQDGKLIIW-----DSYTTNKVHAIPLRSSWV 100
>ZFIN|ZDB-GENE-030131-823 [details] [associations]
symbol:gnb1a "guanine nucleotide binding protein (G
protein), beta polypeptide 1a" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-030131-823 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC056708 EMBL:BC071277 IPI:IPI00506088
RefSeq:NP_997774.1 UniGene:Dr.75526 ProteinModelPortal:Q6PH57
SMR:Q6PH57 STRING:Q6PH57 PRIDE:Q6PH57 Ensembl:ENSDART00000130104
GeneID:322104 KEGG:dre:322104 CTD:322104 InParanoid:Q6PH57
NextBio:20807673 Bgee:Q6PH57 Uniprot:Q6PH57
Length = 340
Score = 122 (48.0 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 52/220 (23%), Positives = 88/220 (40%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H +SC F + + T S D T W + + T +F H +V ++ + D
Sbjct: 142 HTGYLSCCRFLD-DNQIVTSSGDTTCALWDIETGQQTT--TFAGHTGDVMSLSLAPDTRL 198
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYS-GSSDGSIN 206
+ + D S K+W RE T T +S +NA+ FF N ++ GS D +
Sbjct: 199 FVSGACDASAKLWD--VREGMCRQTFT--GHESDINAIC---FFPNGNAFATGSDDATCR 251
Query: 207 FWE--KDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECL 264
++ D+ ++H + G + +L+ +G +D VW + +
Sbjct: 252 LFDLRADQELMVYSHDNIICG--ITSVAFSKSGRLLLAGYDDFNCNVWDALKA----DRA 305
Query: 265 AVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
VL GH V CL + + G V + S D K+W
Sbjct: 306 GVLAGHDNRVSCLGVTDD------GMAVATGSWDSFLKIW 339
Score = 56 (24.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 41 MLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFL 77
+L + ++D K+ IW D++ T KV +P RSS++
Sbjct: 69 LLVSASQDGKLIIW-----DSYTTNKVHAIPLRSSWV 100
>UNIPROTKB|Q6Q0C0 [details] [associations]
symbol:TRAF7 "E3 ubiquitin-protein ligase TRAF7"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=NAS] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0042981 "regulation of apoptotic process"
evidence=IMP] [GO:0000185 "activation of MAPKKK activity"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0006915 "apoptotic process" evidence=IDA] [GO:0043410 "positive
regulation of MAPK cascade" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50145
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 UniPathway:UPA00143
Pfam:PF00097 Prosite:PS00518 GO:GO:0043231 GO:GO:0005886
GO:GO:0006915 GO:GO:0006355 GO:GO:0042981 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016023 GO:GO:0043410 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 InterPro:IPR017907
SUPFAM:SSF49599 Gene3D:3.90.890.10 GO:GO:0000185 EMBL:AY569455
EMBL:AL136921 IPI:IPI00395631 IPI:IPI00470778 RefSeq:NP_115647.2
UniGene:Hs.713632 ProteinModelPortal:Q6Q0C0 SMR:Q6Q0C0
IntAct:Q6Q0C0 MINT:MINT-1161375 STRING:Q6Q0C0 PhosphoSite:Q6Q0C0
DMDM:54036486 PaxDb:Q6Q0C0 PRIDE:Q6Q0C0 Ensembl:ENST00000326181
GeneID:84231 KEGG:hsa:84231 UCSC:uc002cow.3 CTD:84231
GeneCards:GC16P002205 HGNC:HGNC:20456 HPA:HPA041229 MIM:606692
neXtProt:NX_Q6Q0C0 PharmGKB:PA134917323 HOGENOM:HOG000220840
HOVERGEN:HBG055270 InParanoid:Q6Q0C0 KO:K10646 OMA:ALCIQGN
OrthoDB:EOG4BRWK8 PhylomeDB:Q6Q0C0 ChiTaRS:TRAF7 GenomeRNAi:84231
NextBio:73692 ArrayExpress:Q6Q0C0 Bgee:Q6Q0C0 CleanEx:HS_TRAF7
Genevestigator:Q6Q0C0 GermOnline:ENSG00000131653 Uniprot:Q6Q0C0
Length = 670
Score = 142 (55.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 69/274 (25%), Positives = 112/274 (40%)
Query: 1 MVFTGSSSTRIRVWRQPDCVE-RGFIKARHGEVRAILAHDNMLFTTNKDCKIRIW---NF 56
++F+GSS I+VW + + ++ G V A+ L++ + DC I +W N
Sbjct: 410 LLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGCKLYSGSADCTIIVWDIQNL 469
Query: 57 TVSDNFRT--KKVTTLPRRSSFLSFSKSNTQQQHRDCVSC---------------MAFYH 99
+ R V TL + L FS S + D V A
Sbjct: 470 QKVNTIRAHDNPVCTLVSSHNVL-FSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVA 528
Query: 100 AEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSS-DGSVK 158
A+ LY+GS+ +T+K W + + C+ +V +I V C + + +
Sbjct: 529 AQSYLYSGSY-QTIKIWDI--RTLDCIHVLQTSGGSVYSIAVTNHH---IVCGTYENLIH 582
Query: 159 IWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFN 218
+W +E TLT + +V ALA+ S D ++S S D S+ W D M
Sbjct: 583 VWDIESKEQVRTLTGHV----GTVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQT 638
Query: 219 HGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVW 252
L H +V L +FSG+ D+T++VW
Sbjct: 639 ----LLRHQGSVTALAVSRGRLFSGAVDSTVKVW 668
>UNIPROTKB|Q9HAV0 [details] [associations]
symbol:GNB4 "Guanine nucleotide-binding protein subunit
beta-4" species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006112 "energy reserve metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006112 GO:GO:0004871
GO:GO:0071377 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 EMBL:AF300648 EMBL:AK001890
EMBL:BC000873 IPI:IPI00012451 RefSeq:NP_067642.1 UniGene:Hs.173030
ProteinModelPortal:Q9HAV0 SMR:Q9HAV0 IntAct:Q9HAV0
MINT:MINT-1135986 STRING:Q9HAV0 PhosphoSite:Q9HAV0 DMDM:22256759
OGP:Q9HAV0 PeptideAtlas:Q9HAV0 PRIDE:Q9HAV0 DNASU:59345
Ensembl:ENST00000232564 Ensembl:ENST00000468623 GeneID:59345
KEGG:hsa:59345 UCSC:uc003fjv.4 CTD:59345 GeneCards:GC03M179113
HGNC:HGNC:20731 HPA:CAB018383 HPA:CAB018737 MIM:610863
neXtProt:NX_Q9HAV0 PharmGKB:PA134864200 InParanoid:Q9HAV0 KO:K04538
OMA:GACDATS PhylomeDB:Q9HAV0 GenomeRNAi:59345 NextBio:65246
ArrayExpress:Q9HAV0 Bgee:Q9HAV0 CleanEx:HS_GNB4
Genevestigator:Q9HAV0 GermOnline:ENSG00000114450 Uniprot:Q9HAV0
Length = 340
Score = 121 (47.7 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 52/220 (23%), Positives = 90/220 (40%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H +SC F + + T S D T W + + T +F H +V ++ ++ D
Sbjct: 142 HTGYLSCCRFLD-DSQIVTSSGDTTCALWDIETAQQTT--TFTGHSGDVMSLSLSPDMRT 198
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDN-YFLYSGSSDGSIN 206
+ + D S K+W R+ + T S +NA+ SFF N Y +GS D +
Sbjct: 199 FVSGACDASSKLWD--IRDGMCRQSFT--GHVSDINAV---SFFPNGYAFATGSDDATCR 251
Query: 207 FWE--KDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECL 264
++ D+ ++H + G + +L+ +G +D VW +G +
Sbjct: 252 LFDLRADQELLLYSHDNIICG--ITSVAFSKSGRLLLAGYDDFNCNVWDTLKG----DRA 305
Query: 265 AVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
VL GH V CL + + G V + S D ++W
Sbjct: 306 GVLAGHDNRVSCLGVTDD------GMAVATGSWDSFLRIW 339
Score = 57 (25.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 21/80 (26%), Positives = 42/80 (52%)
Query: 6 SSSTRIRVWRQPDCVERGFIKARH---GEVRAILA----HDN-MLFTTNKDCKIRIWNFT 57
+ +T +++ D V R ++ R G + I A +D+ +L + ++D K+ IW
Sbjct: 26 NDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIW--- 82
Query: 58 VSDNFRTKKVTTLPRRSSFL 77
D++ T K+ +P RSS++
Sbjct: 83 --DSYTTNKMHAIPLRSSWV 100
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 48/191 (25%), Positives = 77/191 (40%)
Query: 88 HRDCVSCMAFYHAEG-LLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDG 146
H V+C+ +L TG D V W + + + S H S ++++ + +G
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAI--GKPNAILSLYGHSSGIDSVTFDASEG 72
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
V ++ G++K+W + TLT + SVN FF SGS D ++
Sbjct: 73 LVAAGAASGTIKLWDLEEAKVVRTLTGH-RSNCVSVNFHPFGEFFA-----SGSLDTNLK 126
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAV 266
W+ K + G +G VL + I SG ED ++VW G HE
Sbjct: 127 IWDIRKKGCIHTYKGHTRG--VNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHE---- 180
Query: 267 LDGHRGPVRCL 277
H G ++ L
Sbjct: 181 FKSHEGKIQSL 191
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 140 (54.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 51/185 (27%), Positives = 79/185 (42%)
Query: 104 LYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRV 163
L TGS D T + W D + T + + H + V+ + D + T S D +++ W
Sbjct: 150 LVTGSGDFTARLWDC-DTQ-TPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDP- 206
Query: 164 YRENSHTLTMTLKFQQSSVNALALSSFF---DN--YFLYSGSSDGSINFWEKDKMSGGFN 218
++ S + L+ + AL D+ Y L SGS D ++ W + F
Sbjct: 207 -KKGS-PIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFT 264
Query: 219 HGGFLQGHCFAVLCLV-AIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCL 277
L GH + C+ + I+S S D TIR+W +G C H +L GH V L
Sbjct: 265 ----LSGHTAPITCVRWGGQNWIYSSSYDKTIRIWDAKDGKCLH----ILKGHAARVNHL 316
Query: 278 AASLE 282
+ S E
Sbjct: 317 SLSTE 321
Score = 126 (49.4 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 51/193 (26%), Positives = 82/193 (42%)
Query: 122 RCTCVDSFVAHESNV-NAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQS 180
RCT S H+ + +A + T S D + ++W ++ T T+K +
Sbjct: 125 RCTA--SMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDC----DTQTPIATMKGHTN 178
Query: 181 SVNALALSSFFDNYFLYSGSSDGSINFWEKDKMS--GGF--NHGGFLQGHCFAVLCLVAI 236
V+ +A + D + +GS D +I FW+ K S G H + C+ L L
Sbjct: 179 WVSCVAWAP--DASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPD 236
Query: 237 EK--LIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYS 294
L+ SGS+D T+R+W L L GH P+ C+ + +YS
Sbjct: 237 SGPYLLASGSKDNTVRIWNVK----LRTLLFTLSGHTAPITCVRWGGQN-------WIYS 285
Query: 295 SSLDQTFKVWRVK 307
SS D+T ++W K
Sbjct: 286 SSYDKTIRIWDAK 298
Score = 118 (46.6 bits), Expect = 0.00047, P = 0.00047
Identities = 48/173 (27%), Positives = 76/173 (43%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIV--- 140
T + H + VSC+A+ ++ TGS D T++ W K D+ H + A+
Sbjct: 172 TMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDP-KKGSPIGDALRRHTKPIMALCWQP 230
Query: 141 --VNQDDG--FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFL 196
+ D G + + S D +V+IW R TL TL + + + N+ +
Sbjct: 231 LHLAPDSGPYLLASGSKDNTVRIWNVKLR----TLLFTLSGHTAPITCVRWGG--QNW-I 283
Query: 197 YSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCL-VAIEKLIFSGSEDTT 248
YS S D +I W D G H L+GH V L ++ E ++ SG+ D T
Sbjct: 284 YSSSYDKTIRIW--DAKDGKCLH--ILKGHAARVNHLSLSTEHVLRSGAYDHT 332
>UNIPROTKB|E2RH42 [details] [associations]
symbol:TEP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003723
GO:GO:0030529 InterPro:IPR007111 PROSITE:PS50837
GeneTree:ENSGT00690000102183 OMA:SVPDAWK InterPro:IPR025139
InterPro:IPR008850 Pfam:PF13271 Pfam:PF05386 PROSITE:PS51226
EMBL:AAEX03009827 EMBL:AAEX03009828 EMBL:AAEX03009829
Ensembl:ENSCAFT00000008693 Uniprot:E2RH42
Length = 2602
Score = 148 (57.2 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 76/301 (25%), Positives = 126/301 (41%)
Query: 25 IKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFLSFSKSNT 84
+ R G V + +L +T++ +R+W ++ LP + + F +
Sbjct: 1986 LPGRQGPVWGLAVSGELLASTSEALPVRLW---------PRQPLMLPLQEA--DFPRGAE 2034
Query: 85 QQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVD-SFVA-HESNVNAIVVN 142
++H+ VSC F G L TG D+ + W V + V SF+A H V
Sbjct: 2035 LREHQGPVSCCGFSADGGRLATGGRDRNLFCWDVRKPQGPVVICSFLACHHDWVTGCAWT 2094
Query: 143 QDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSD 202
+D+ V +CSSDGSV +W E L + L QS+V+A+A D + + G D
Sbjct: 2095 RDNLLV-SCSSDGSVGLWDP---ERQQRLGLFLG-HQSAVSAVAA---VDAHVVSVGR-D 2145
Query: 203 GSINFWEKD--KMSGGFNHGGFLQGHCFAVLCLVA----IEKLIFSGSEDTTIRVWRRAE 256
G++ W+ +++ H G + A+ A E L+ + D R+W
Sbjct: 2146 GTLKVWDHRGVELTSIPAHSGPISQCAVALEPRAAGQPGSELLVATVGLDGATRLWHPLL 2205
Query: 257 GGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQEKTM 316
H L GH GP+ A S G L+ +S D + ++W+V P++
Sbjct: 2206 VSQTHTLL----GHSGPISAAAVS-----EASGLLLTASE-DGSVRLWQV---PEEADDT 2252
Query: 317 C 317
C
Sbjct: 2253 C 2253
>FB|FBgn0033454 [details] [associations]
symbol:CG1671 species:7227 "Drosophila melanogaster"
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 HSSP:P16649 GO:GO:0032040 KO:K14555
GeneTree:ENSGT00690000102183 OMA:ADSKLIR EMBL:BT004480
RefSeq:NP_610526.1 UniGene:Dm.18811 SMR:Q7JQT9 IntAct:Q7JQT9
STRING:Q7JQT9 EnsemblMetazoa:FBtr0088373 GeneID:36019
KEGG:dme:Dmel_CG1671 UCSC:CG1671-RA FlyBase:FBgn0033454
HOGENOM:HOG000244907 InParanoid:Q7JQT9 OrthoDB:EOG4KPRRV
GenomeRNAi:36019 NextBio:796373 Uniprot:Q7JQT9
Length = 787
Score = 142 (55.0 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 57/233 (24%), Positives = 103/233 (44%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVL-DKRCTC---VDSFVAHESNVNAIVV-- 141
H D V +A ++ LL + D +V+ WR+ DK C+ H S + + +
Sbjct: 379 HSDTVMSLAA--SQNLLISVGKDCSVRLWRLQHDKDCSLEALTQQANCHTSTIGCVAMTH 436
Query: 142 NQDDGFVFTCSSDGSVKIWRRVY-RENSHTLTMTLKFQQSS----VNALALSSFFDNYFL 196
N GF + S DGS+K+W+ V +E+ ++ + L++ S VN +A + +N +
Sbjct: 437 NGATGFA-SVSQDGSMKVWQLVRSKEDRNSYSFNLRYAALSHDKEVNCVAYAP--NNKLI 493
Query: 197 YSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCL--VAIEKLIFSGSEDTTIRVWRR 254
+ S D + W + S G L+GH V + +++++ + S D T+R+W
Sbjct: 494 ATASQDKTAKVWLAE--SNTLQ--GVLRGHTRGVWSVRFSPVDQIVLTSSSDCTLRIWSI 549
Query: 255 AEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
+ C R C L E + G + S++ D K+W +K
Sbjct: 550 SNFSCIK---------RFDQECTI--LRAEFLDHGKFIISAASDGLLKLWNIK 591
Score = 44 (20.5 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 12/57 (21%), Positives = 24/57 (42%)
Query: 4 TGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDNML----FTTNKDCKIRIWNF 56
+G + +R+W + G +K G ++ H N+L + D + WN+
Sbjct: 137 SGGADATLRLWDYSNNSCLGALKDFPGPAWLLVFHPNVLRKEIYAGGSDNTVYAWNY 193
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 139 (54.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 58/220 (26%), Positives = 102/220 (46%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V + + +L T D + W + ++ V S H+S V ++ V + D
Sbjct: 246 HLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQNVHVLS--GHKSTVASLAVQEFDPQ 303
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
V T S D ++++W + TLT TL + +V AL+L D + SGSSD +I
Sbjct: 304 VVTGSMDSTIRLWDLAAGK---TLT-TLTHHKKTVRALSLHP--DEFTFASGSSD-NIKH 356
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCL-VAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAV 266
W+ + G F G F +GH V L + + ++FSG+++ ++ W G Y E +V
Sbjct: 357 WKFPE--GAFM-GNF-EGHNAIVNTLSINSDNVMFSGADNGSMCFWDWKSGHKYQELQSV 412
Query: 267 LD-GHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWR 305
+ G + AS +K G + + D++ K+++
Sbjct: 413 VQPGSLDSEAGIFAS-SFDKT--GLRLITCEADKSVKIYK 449
Score = 119 (46.9 bits), Expect = 0.00033, P = 0.00033
Identities = 49/193 (25%), Positives = 75/193 (38%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V C+ TG+ D+T+K W + + H + V + V+ +
Sbjct: 162 HLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKL--TLTGHIATVRGLAVSPRHPY 219
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+F+C D VK W ++ + S V AL L D L + D
Sbjct: 220 LFSCGEDKMVKCWDL----ETNKVIRHYHGHLSGVYALKLHPTLD--VLVTAGRDAVARV 273
Query: 208 WEKDKMSGGFNHGGFLQGH--CFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLA 265
W D + H L GH A L + + + +GS D+TIR+W A G + L
Sbjct: 274 W--DMRTRQNVH--VLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAG----KTLT 325
Query: 266 VLDGHRGPVRCLA 278
L H+ VR L+
Sbjct: 326 TLTHHKKTVRALS 338
>ZFIN|ZDB-GENE-050417-160 [details] [associations]
symbol:wdr38 "WD repeat domain 38" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-050417-160
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
HOGENOM:HOG000091642 CTD:401551 HOVERGEN:HBG106736
OrthoDB:EOG4ZW5BD EMBL:BC093164 IPI:IPI00570124
RefSeq:NP_001017672.1 UniGene:Dr.91594 ProteinModelPortal:Q567I2
STRING:Q567I2 GeneID:550366 KEGG:dre:550366 InParanoid:Q567I2
NextBio:20879618 Uniprot:Q567I2
Length = 216
Score = 131 (51.2 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 59/207 (28%), Positives = 85/207 (41%)
Query: 79 FSKSNTQ--QQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNV 136
FS N + +H+ V+C AF LL T + W+ + S H V
Sbjct: 10 FSVDNIRYFSRHKAEVNCCAFSPDCQLLLTCCDAGKLYLWKTSTAKLLA--SVSGHTGPV 67
Query: 137 NAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFL 196
V + D + S D SV+ W + +HTLT + SV ++ S D +L
Sbjct: 68 KCCVFSSDGRLFASASHDCSVRTWCNSSLKCTHTLTA----HRRSVETVSFSP--DGQWL 121
Query: 197 YSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLV--AIEKLIFSGSEDTTIRVWRR 254
SG D W SG L+GH AV V + + + +GS D +RVW+
Sbjct: 122 LSGGWDNRALIWSIQ--SGALLEE--LKGHNAAVQSSVFSSDSQSVATGSWDRAVRVWKL 177
Query: 255 AEGGCYHECLAVLDGHRGPVRCLAASL 281
+ E + VL GH G V CL S+
Sbjct: 178 RDRQA--EAV-VLQGHLGNVACLCFSV 201
>UNIPROTKB|Q5EA56 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000185 "activation of MAPKKK activity" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Pfam:PF00097 Prosite:PS00518 GO:GO:0043231 GO:GO:0005886
GO:GO:0006915 GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043410
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00690000101849 GO:GO:0000185 CTD:84231
HOGENOM:HOG000220840 HOVERGEN:HBG055270 KO:K10646 OMA:ALCIQGN
OrthoDB:EOG4BRWK8 EMBL:DAAA02057310 EMBL:DAAA02057311 EMBL:BT020713
IPI:IPI00696466 RefSeq:NP_001019692.1 UniGene:Bt.2084 STRING:Q5EA56
Ensembl:ENSBTAT00000025393 GeneID:511692 KEGG:bta:511692
InParanoid:Q5EA56 NextBio:20870056 Uniprot:Q5EA56
Length = 669
Score = 141 (54.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 69/274 (25%), Positives = 112/274 (40%)
Query: 1 MVFTGSSSTRIRVWRQPDCVE-RGFIKARHGEVRAILAHDNMLFTTNKDCKIRIW---NF 56
++F+GSS I+VW + + ++ G V A+ L++ + DC I +W N
Sbjct: 409 LLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGCKLYSGSADCTIIVWDIQNL 468
Query: 57 TVSDNFRT--KKVTTLPRRSSFLSFSKSNTQQQHRDCVSC---------------MAFYH 99
+ R V TL + L FS S + D V A
Sbjct: 469 QKVNTIRAHDNPVCTLVSSHNML-FSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVA 527
Query: 100 AEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSS-DGSVK 158
A+ LY+GS+ +T+K W + + C+ +V +I V C + + +
Sbjct: 528 AQTYLYSGSY-QTIKIWDI--RTLDCIHVLQTSGGSVYSIAVTNHH---IVCGTYENLIH 581
Query: 159 IWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFN 218
+W +E TLT + +V ALA+ S D ++S S D S+ W D M
Sbjct: 582 VWDIESKEQVRTLTGHV----GTVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQT 637
Query: 219 HGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVW 252
L H +V L +FSG+ D+T++VW
Sbjct: 638 ----LLRHQGSVTALAVSRGRLFSGAVDSTVKVW 667
>UNIPROTKB|Q676U5 [details] [associations]
symbol:ATG16L1 "Autophagy-related protein 16-1"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] [GO:0034045 "pre-autophagosomal structure membrane"
evidence=IEA] [GO:0005776 "autophagic vacuole" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=NAS] [GO:0000045
"autophagic vacuole assembly" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 EMBL:CH471063 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AY398617 EMBL:EF079889
EMBL:EF079890 EMBL:AY358182 EMBL:AK026330 EMBL:AK027854
EMBL:AK123876 EMBL:AC013726 EMBL:BC071846 EMBL:AL834526
IPI:IPI00432751 IPI:IPI00446614 IPI:IPI00470446 IPI:IPI00555905
IPI:IPI00797150 RefSeq:NP_001177195.1 RefSeq:NP_001177196.1
RefSeq:NP_060444.3 RefSeq:NP_110430.5 RefSeq:NP_942593.2
UniGene:Hs.529322 PDB:4GDK PDB:4GDL PDBsum:4GDK PDBsum:4GDL
ProteinModelPortal:Q676U5 SMR:Q676U5 DIP:DIP-27552N IntAct:Q676U5
MINT:MINT-1141152 STRING:Q676U5 PhosphoSite:Q676U5 DMDM:62510482
PaxDb:Q676U5 PRIDE:Q676U5 DNASU:55054 Ensembl:ENST00000347464
Ensembl:ENST00000373525 Ensembl:ENST00000392017
Ensembl:ENST00000392020 GeneID:55054 KEGG:hsa:55054 UCSC:uc002vty.3
UCSC:uc002vtz.3 UCSC:uc002vua.3 CTD:55054 GeneCards:GC02P234118
HGNC:HGNC:21498 HPA:HPA012577 MIM:610767 MIM:611081
neXtProt:NX_Q676U5 Orphanet:206 PharmGKB:PA134902949
HOGENOM:HOG000112569 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8
GenomeRNAi:55054 NextBio:58531 ArrayExpress:Q676U5 Bgee:Q676U5
CleanEx:HS_ATG16L1 Genevestigator:Q676U5 GermOnline:ENSG00000085978
GO:GO:0005776 GO:GO:0000421 GO:GO:0034045 GO:GO:0000045
GO:GO:0051260 InterPro:IPR013923 Pfam:PF08614 Uniprot:Q676U5
Length = 607
Score = 140 (54.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 46/166 (27%), Positives = 68/166 (40%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V+ + F LL TG D+ VK W V ++C S + + +I + +
Sbjct: 321 HDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAGSY 380
Query: 148 VFTCSSDGSVKIWR-RVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
+ S+D + +IW YR HTLT S L+ DN + SGS D ++
Sbjct: 381 LLAASNDFASRIWTVDDYRLR-HTLT------GHSGKVLSAKFLLDNARIVSGSHDRTLK 433
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVW 252
W D S F C ++C E+ + SG D IR W
Sbjct: 434 LW--DLRSKVCIKTVFAGSSCNDIVCT---EQCVMSGHFDKKIRFW 474
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 140 (54.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 56/198 (28%), Positives = 88/198 (44%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H + + F H + +GS D+T + W V +C + E+ V AI ++ +D F
Sbjct: 401 HEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILK---LEIENGVTAIAISPNDQF 457
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ S D +++W S TL L+ + SV ++A S D+ L SGS D +I
Sbjct: 458 IAVGSLDQIIRVW-----SVSGTLVERLEGHKESVYSIAFSP--DSSILLSGSLDKTIKV 510
Query: 208 WE-KDKMSGGFNH---GGFLQ----GHCFAVLCLVAIE---KLIFSGSEDTTIRVWRRAE 256
WE + S G + G + GH VL VA+ + SGS+D +++ W
Sbjct: 511 WELQATRSVGLSAIKPEGICKATYTGHTDFVLS-VAVSPDSRWGLSGSKDRSMQFWDLQT 569
Query: 257 GGCYHECLAVLDGHRGPV 274
G Y C GH+ V
Sbjct: 570 GQSYLTC----QGHKNSV 583
Score = 127 (49.8 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 61/228 (26%), Positives = 101/228 (44%)
Query: 89 RDC-VSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
RD V +AF L TG+ D+ +K W + ++ V F HE ++ ++ + + F
Sbjct: 359 RDLYVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYV--FSGHEQDIYSLDFSHNGRF 416
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQ-QSSVNALALSSFFDNYFLYSGSSDGSIN 206
+ + S D + ++W + T LK + ++ V A+A+S ++ F+ GS D I
Sbjct: 417 IVSGSGDRTARLW------DVETGQCILKLEIENGVTAIAISP--NDQFIAVGSLDQIIR 468
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAI--EKLIFSGSEDTTIRVWR----RAEG--G 258
W +SG L+GH +V + ++ SGS D TI+VW R+ G
Sbjct: 469 VWS---VSGTLVER--LEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSA 523
Query: 259 CYHE--CLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
E C A GH V +A S + G S S D++ + W
Sbjct: 524 IKPEGICKATYTGHTDFVLSVAVSPDSR---WGL---SGSKDRSMQFW 565
WARNING: HSPs involving 365 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.133 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 358 358 0.00081 117 3 11 22 0.47 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 615
No. of states in DFA: 616 (65 KB)
Total size of DFA: 272 KB (2141 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.73u 0.08s 32.81t Elapsed: 00:00:01
Total cpu time: 32.82u 0.08s 32.90t Elapsed: 00:00:01
Start: Sat May 11 11:24:44 2013 End: Sat May 11 11:24:45 2013
WARNINGS ISSUED: 2