BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038537
(358 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P90648|MHCKB_DICDI Myosin heavy chain kinase B OS=Dictyostelium discoideum GN=mhkB
PE=2 SV=1
Length = 732
Score = 88.2 bits (217), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 141/309 (45%), Gaps = 56/309 (18%)
Query: 1 MVFTGSSSTRIRVW----RQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNF 56
++FTG S IRV+ + +CV+ +K G V +I +D LF+ + D I++W+
Sbjct: 472 LLFTGCSDNSIRVYDYKSQNMECVQT--LKGHEGPVESICYNDQYLFSGSSDHSIKVWDL 529
Query: 57 TVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAW 116
KK+ R F T + H V + + L++GS DKT+K W
Sbjct: 530 --------KKL-----RCIF-------TLEGHDKPVHTVLL--NDKYLFSGSSDKTIKVW 567
Query: 117 RVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWR-RVYRENSHTLTMTL 175
+ K C + +H V + ++ ++F+ S+D ++K+W + +R N TL
Sbjct: 568 DL--KTLECKYTLESHARAVKTLCISGQ--YLFSGSNDKTIKVWDLKTFRCN-----YTL 618
Query: 176 KFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVA 235
K V + + LYSGS D +I W + L+GH V +V
Sbjct: 619 KGHTKWVTTICILG----TNLYSGSYDKTIRVWNLKSLEC----SATLRGHDRWVEHMVI 670
Query: 236 IEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSS 295
+KL+F+ S+D TI++W C L+GH V+CLA E +K V+ S
Sbjct: 671 CDKLLFTASDDNTIKIWDLET----LRCNTTLEGHNATVQCLAV-WEDKKCVI-----SC 720
Query: 296 SLDQTFKVW 304
S DQ+ +VW
Sbjct: 721 SHDQSIRVW 729
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 126/271 (46%), Gaps = 48/271 (17%)
Query: 39 DNMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFY 98
DN+LFT D IR++++ S N V TL + H V + +
Sbjct: 470 DNLLFTGCSDNSIRVYDYK-SQNMEC--VQTL---------------KGHEGPVESICY- 510
Query: 99 HAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVK 158
+ L++GS D ++K W + K+ C+ + H+ V+ +++N D ++F+ SSD ++K
Sbjct: 511 -NDQYLFSGSSDHSIKVWDL--KKLRCIFTLEGHDKPVHTVLLN--DKYLFSGSSDKTIK 565
Query: 159 IWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFN 218
+W E +TL + +V L +S +L+SGS+D +I W+ +
Sbjct: 566 VWDLKTLECKYTL----ESHARAVKTLCISG----QYLFSGSNDKTIKVWDLKTFRCNYT 617
Query: 219 HGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLA 278
L+GH V + + ++SGS D TIRVW EC A L GH V +
Sbjct: 618 ----LKGHTKWVTTICILGTNLYSGSYDKTIRVWNLKS----LECSATLRGHDRWVEHM- 668
Query: 279 ASLEMEKVVMGFLVYSSSLDQTFKVWRVKVM 309
V+ L++++S D T K+W ++ +
Sbjct: 669 -------VICDKLLFTASDDNTIKIWDLETL 692
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 91/205 (44%), Gaps = 41/205 (20%)
Query: 104 LYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRV 163
L T +T+K + V C C D +FT SD S++++
Sbjct: 448 LETIKLIETIKGYHVTSHLCIC-------------------DNLLFTGCSDNSIRVYD-- 486
Query: 164 YRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFL 223
Y+ + TLK + V ++ +++ +L+SGSSD SI W+ K+ F L
Sbjct: 487 YKSQNMECVQTLKGHEGPVESIC----YNDQYLFSGSSDHSIKVWDLKKLRCIFT----L 538
Query: 224 QGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEM 283
+GH V ++ +K +FSGS D TI+VW EC L+ H V+ L S
Sbjct: 539 EGHDKPVHTVLLNDKYLFSGSSDKTIKVWDLKT----LECKYTLESHARAVKTLCIS--- 591
Query: 284 EKVVMGFLVYSSSLDQTFKVWRVKV 308
G ++S S D+T KVW +K
Sbjct: 592 -----GQYLFSGSNDKTIKVWDLKT 611
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 85.5 bits (210), Expect = 5e-16, Method: Composition-based stats.
Identities = 73/251 (29%), Positives = 118/251 (47%), Gaps = 27/251 (10%)
Query: 58 VSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWR 117
V +N + VTTL + + + N + H+D V ++ + +GS DKT+K W
Sbjct: 1043 VPNNLKLATVTTL--QQALFEMQERNRLEGHKDGVISISISRDGQTIASGSLDKTIKLWS 1100
Query: 118 VLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKF 177
D R + HE V ++ + D + + SD ++K+W + + TL T+
Sbjct: 1101 -RDGR--LFRTLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLW----QTSDGTLLKTITG 1153
Query: 178 QQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCL--VA 235
+ +VN + S D L S SSD SI W D SG L GH V+ +
Sbjct: 1154 HEQTVNNVYFSP--DGKNLASASSDHSIKLW--DTTSGQLLMT--LTGHSAGVITVRFSP 1207
Query: 236 IEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSS 295
+ I +GSED T+++W R +G + L L+GH+ V L+ S + G + S+
Sbjct: 1208 DGQTIAAGSEDKTVKLWHRQDG----KLLKTLNGHQDWVNSLSFSPD------GKTLASA 1257
Query: 296 SLDQTFKVWRV 306
S D+T K+WR+
Sbjct: 1258 SADKTIKLWRI 1268
Score = 70.5 bits (171), Expect = 2e-11, Method: Composition-based stats.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 26/224 (11%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQ 143
T H D V ++F + +G DKT+K W+ D T + + HE VN + +
Sbjct: 1108 TLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSDG--TLLKTITGHEQTVNNVYFSP 1165
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
D + + SSD S+K+W S L MTL + V + S D + +GS D
Sbjct: 1166 DGKNLASASSDHSIKLW----DTTSGQLLMTLTGHSAGVITVRFSP--DGQTIAAGSEDK 1219
Query: 204 SINFWEKD--KMSGGFN-HGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCY 260
++ W + K+ N H ++ F+ K + S S D TI++WR A+G
Sbjct: 1220 TVKLWHRQDGKLLKTLNGHQDWVNSLSFS-----PDGKTLASASADKTIKLWRIADG--- 1271
Query: 261 HECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
+ + L GH V + S + G + S+S D T K+W
Sbjct: 1272 -KLVKTLKGHNDSVWDVNFSSD------GKAIASASRDNTIKLW 1308
Score = 67.8 bits (164), Expect = 1e-10, Method: Composition-based stats.
Identities = 69/307 (22%), Positives = 120/307 (39%), Gaps = 42/307 (13%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHD-NMLFTTNKDCKIRIWNFTVS 59
++ + S IR+W++P + G HD +++ T D I++W+
Sbjct: 1336 IIASASLDNTIRLWQRPLISPLEVLAGNSGVYAVSFLHDGSIIATAGADGNIQLWHSQDG 1395
Query: 60 DNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVL 119
+T LP + S F L+ + + DKTVK WRV
Sbjct: 1396 SLLKT-----LPGNKAIYGIS----------------FTPQGDLIASANADKTVKIWRVR 1434
Query: 120 DKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQ 179
D + + + + H++ VN + + D + + S D +VK+W + TLK
Sbjct: 1435 DGKA--LKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWN----VSDGKFKKTLKGHT 1488
Query: 180 SSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKL 239
V ++ S D + S S+D +I W D SG + +
Sbjct: 1489 DEVFWVSFSP--DGKIIASASADKTIRLW--DSFSGNLIKSLPAHNDLVYSVNFNPDGSM 1544
Query: 240 IFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQ 299
+ S S D T+++WR +G H GH V + S + G + S+S D+
Sbjct: 1545 LASTSADKTVKLWRSHDGHLLH----TFSGHSNVVYSSSFSPD------GRYIASASEDK 1594
Query: 300 TFKVWRV 306
T K+W++
Sbjct: 1595 TVKIWQI 1601
Score = 62.0 bits (149), Expect = 7e-09, Method: Composition-based stats.
Identities = 66/277 (23%), Positives = 112/277 (40%), Gaps = 77/277 (27%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGE-VRAILAHDN------------MLFTTNK 47
++ + ++ +++WR R G+ ++ ++ HDN L + ++
Sbjct: 1418 LIASANADKTVKIWR-----------VRDGKALKTLIGHDNEVNKVNFSPDGKTLASASR 1466
Query: 48 DCKIRIWNFTVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTG 107
D +++WN VSD F K T + H D V ++F ++ +
Sbjct: 1467 DNTVKLWN--VSDG----------------KFKK--TLKGHTDEVFWVSFSPDGKIIASA 1506
Query: 108 SFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYREN 167
S DKT++ W + S AH V ++ N D + + S+D +VK+WR
Sbjct: 1507 SADKTIRLWDSFSG--NLIKSLPAHNDLVYSVNFNPDGSMLASTSADKTVKLWR------ 1558
Query: 168 SHTLTMTLKFQQSSVNALALSSFF-DNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGH 226
SH + F S N + SSF D ++ S S D ++ W+ D GH
Sbjct: 1559 SHDGHLLHTFSGHS-NVVYSSSFSPDGRYIASASEDKTVKIWQID-------------GH 1604
Query: 227 CFAVL------CLVAI----EKLIFSGSEDTTIRVWR 253
L + AI K + SGS DTT ++WR
Sbjct: 1605 LLTTLPQHQAGVMSAIFSPDGKTLISGSLDTTTKIWR 1641
Score = 61.6 bits (148), Expect = 8e-09, Method: Composition-based stats.
Identities = 55/224 (24%), Positives = 98/224 (43%), Gaps = 23/224 (10%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQ 143
T H+D V+ ++F L + S DKT+K WR+ D + V + H +V + +
Sbjct: 1234 TLNGHQDWVNSLSFSPDGKTLASASADKTIKLWRIADGK--LVKTLKGHNDSVWDVNFSS 1291
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
D + + S D ++K+W R H + + F S A++ D+ + S S D
Sbjct: 1292 DGKAIASASRDNTIKLWNR------HGIELE-TFTGHSGGVYAVNFLPDSNIIASASLDN 1344
Query: 204 SINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHEC 263
+I W++ +S G +AV + +I + D I++W +G
Sbjct: 1345 TIRLWQRPLISPLEVLAG--NSGVYAV-SFLHDGSIIATAGADGNIQLWHSQDG----SL 1397
Query: 264 LAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
L L G++ A + G L+ S++ D+T K+WRV+
Sbjct: 1398 LKTLPGNK-------AIYGISFTPQGDLIASANADKTVKIWRVR 1434
Score = 46.2 bits (108), Expect = 4e-04, Method: Composition-based stats.
Identities = 76/327 (23%), Positives = 130/327 (39%), Gaps = 49/327 (14%)
Query: 4 TGSSSTRIRVWRQPDCVERGFIKARHGEVRAI-LAHD-NMLFTTNKDCKIRIWN------ 55
+ S+ I++WR D +K + V + + D + + ++D I++WN
Sbjct: 1256 SASADKTIKLWRIADGKLVKTLKGHNDSVWDVNFSSDGKAIASASRDNTIKLWNRHGIEL 1315
Query: 56 --FTVSDNFRTKKVTTLPRRSSFLSFSKSNT-QQQHRDCVS------------CMAFYHA 100
FT + V LP + S S NT + R +S ++F H
Sbjct: 1316 ETFT-GHSGGVYAVNFLPDSNIIASASLDNTIRLWQRPLISPLEVLAGNSGVYAVSFLHD 1374
Query: 101 EGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW 160
++ T D ++ W D + + + +++ Q D + + ++D +VKIW
Sbjct: 1375 GSIIATAGADGNIQLWHSQDG--SLLKTLPGNKAIYGISFTPQGD-LIASANADKTVKIW 1431
Query: 161 RRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHG 220
R R+ TL + VN + S D L S S D ++ W + G F
Sbjct: 1432 R--VRDGK--ALKTLIGHDNEVNKVNFSP--DGKTLASASRDNTVKLW--NVSDGKFKKT 1483
Query: 221 GFLQGHCFAV--LCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLA 278
L+GH V + K+I S S D TIR+W G + L H V +
Sbjct: 1484 --LKGHTDEVFWVSFSPDGKIIASASADKTIRLWDSFSG----NLIKSLPAHNDLVYSVN 1537
Query: 279 ASLEMEKVVMGFLVYSSSLDQTFKVWR 305
+ + G ++ S+S D+T K+WR
Sbjct: 1538 FNPD------GSMLASTSADKTVKLWR 1558
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 106/228 (46%), Gaps = 30/228 (13%)
Query: 82 SNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVV 141
+ T + H V +AF + +GS DKT+K W TC + H V ++V
Sbjct: 1002 TQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASG--TCTQTLEGHGGWVQSVVF 1059
Query: 142 NQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSS 201
+ D V + S D ++KIW V S T T TL+ SV ++A S D + SGS
Sbjct: 1060 SPDGQRVASGSDDHTIKIWDAV----SGTCTQTLEGHGDSVWSVAFSP--DGQRVASGSI 1113
Query: 202 DGSINFWEKDKMSGG-----FNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAE 256
DG+I W D SG HGG++ F+ + + SGS D TI++W A
Sbjct: 1114 DGTIKIW--DAASGTCTQTLEGHGGWVHSVAFS-----PDGQRVASGSIDGTIKIWDAAS 1166
Query: 257 GGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
G C L+GH G V+ +A S + ++V G S D+T K+W
Sbjct: 1167 GTCTQ----TLEGHGGWVQSVAFSPDGQRVASG------SSDKTIKIW 1204
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 105/229 (45%), Gaps = 24/229 (10%)
Query: 78 SFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVN 137
S + + T + H V +AF + +GS DKT+K W TC + H V
Sbjct: 872 SGTGTQTLEGHGGSVWSVAFSPDRERVASGSDDKTIKIWDAASG--TCTQTLEGHGGRVQ 929
Query: 138 AIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLY 197
++ + D V + S D ++KIW S T T TL+ SSV ++A S D +
Sbjct: 930 SVAFSPDGQRVASGSDDHTIKIWDAA----SGTCTQTLEGHGSSVLSVAFSP--DGQRVA 983
Query: 198 SGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAV--LCLVAIEKLIFSGSEDTTIRVWRRA 255
SGS D +I W D SG L+GH +V + + + SGS+D TI++W A
Sbjct: 984 SGSGDKTIKIW--DTASGTCTQ--TLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTA 1039
Query: 256 EGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
G C L+GH G V+ + S + ++V G S D T K+W
Sbjct: 1040 SGTCTQ----TLEGHGGWVQSVVFSPDGQRVASG------SDDHTIKIW 1078
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 102/225 (45%), Gaps = 24/225 (10%)
Query: 82 SNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVV 141
+ T + H V +AF + +GS DKT+K W T + H +V ++
Sbjct: 834 TQTLEGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTASG--TGTQTLEGHGGSVWSVAF 891
Query: 142 NQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSS 201
+ D V + S D ++KIW S T T TL+ V ++A S D + SGS
Sbjct: 892 SPDRERVASGSDDKTIKIWDAA----SGTCTQTLEGHGGRVQSVAFSP--DGQRVASGSD 945
Query: 202 DGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLV--AIEKLIFSGSEDTTIRVWRRAEGGC 259
D +I W D SG L+GH +VL + + + SGS D TI++W A G C
Sbjct: 946 DHTIKIW--DAASGTCTQ--TLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTC 1001
Query: 260 YHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
L+GH G V +A S + ++V G S D+T K+W
Sbjct: 1002 TQ----TLEGHGGSVWSVAFSPDGQRVASG------SDDKTIKIW 1036
Score = 75.1 bits (183), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 131/319 (41%), Gaps = 56/319 (17%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAIL--AHDNMLFTTNKDCKIRIWNFTVS 59
V +GS I++W ++ G V++++ + + + D I+IW+
Sbjct: 1024 VASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDA--- 1080
Query: 60 DNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVL 119
+S + + T + H D V +AF + +GS D T+K W
Sbjct: 1081 -----------------VSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAA 1123
Query: 120 DKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQ 179
TC + H V+++ + D V + S DG++KIW S T T TL+
Sbjct: 1124 SG--TCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAA----SGTCTQTLEGHG 1177
Query: 180 SSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGG-----FNHGGFLQGHCFAVLCLV 234
V ++A S D + SGSSD +I W D SG HGG++Q F+
Sbjct: 1178 GWVQSVAFSP--DGQRVASGSSDKTIKIW--DTASGTCTQTLEGHGGWVQSVAFS----- 1228
Query: 235 AIEKLIFSGSEDTTIRVWRRAEGGCYH--------ECL------AVLDGHRGPVRCLAAS 280
+ + SGS D TI++W A G C CL A ++ + G ++ A+
Sbjct: 1229 PDGQRVASGSSDNTIKIWDTASGTCTQTLNVGSTATCLSFDYTNAYINTNIGRIQIATAT 1288
Query: 281 LEMEKVVMGFLVYSSSLDQ 299
+E + + YS L Q
Sbjct: 1289 MESLNQLSSPVCYSYGLGQ 1307
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 28/178 (15%)
Query: 129 FVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALS 188
F +S + I ++ G++ T S V + T TL+ SSV ++A S
Sbjct: 801 FAPTDSMIKKIFKKEEPGWISTIS----------VVEAEWNACTQTLEGHGSSVLSVAFS 850
Query: 189 SFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAV--LCLVAIEKLIFSGSED 246
+ D + SGS D +I W+ +G L+GH +V + + + SGS+D
Sbjct: 851 A--DGQRVASGSDDKTIKIWDTASGTGTQT----LEGHGGSVWSVAFSPDRERVASGSDD 904
Query: 247 TTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
TI++W A G C L+GH G V+ +A S + ++V G S D T K+W
Sbjct: 905 KTIKIWDAASGTCTQ----TLEGHGGRVQSVAFSPDGQRVASG------SDDHTIKIW 952
>sp|P42527|MHCKA_DICDI Myosin heavy chain kinase A OS=Dictyostelium discoideum GN=mhkA PE=1
SV=2
Length = 1146
Score = 83.6 bits (205), Expect = 2e-15, Method: Composition-based stats.
Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 32/228 (14%)
Query: 83 NTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVN 142
N ++ + ++C + Y ++T S D T+K + C+++ V H VN +V N
Sbjct: 909 NGHRKSIESIACNSNY-----IFTSSPDNTIKVHIIRSGNTKCIETLVGHTGEVNCVVAN 963
Query: 143 QDDGFVFTCSSDGSVKIWR-RVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSS 201
+ ++F+CS D ++K+W ++E + K+ + LALS +L+SG +
Sbjct: 964 EK--YLFSCSYDKTIKVWDLSTFKEIKSFEGVHTKY----IKTLALSG----RYLFSGGN 1013
Query: 202 DGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYH 261
D I W+ + +S FN +QGH VL L +FS S+D I++W +
Sbjct: 1014 DQIIYVWDTETLSMLFN----MQGHEDWVLSLHCTASYLFSTSKDNVIKIWDLSN----F 1065
Query: 262 ECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVM 309
C+ L GH V VV +YS S D + KVW + +
Sbjct: 1066 SCIDTLKGHWNSVSSC--------VVKDRYLYSGSEDNSIKVWDLDTL 1105
Score = 63.5 bits (153), Expect = 2e-09, Method: Composition-based stats.
Identities = 58/234 (24%), Positives = 101/234 (43%), Gaps = 42/234 (17%)
Query: 2 VFTGSSSTRIRVW----RQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFT 57
+FT S I+V C+E + GEV ++A++ LF+ + D I++W+ +
Sbjct: 925 IFTSSPDNTIKVHIIRSGNTKCIET--LVGHTGEVNCVVANEKYLFSCSYDKTIKVWDLS 982
Query: 58 VSDNFR------TKKVTTLPRRSSFLSFSKSNTQ----------------QQHRDCVSCM 95
+ TK + TL +L FS N Q Q H D V +
Sbjct: 983 TFKEIKSFEGVHTKYIKTLALSGRYL-FSGGNDQIIYVWDTETLSMLFNMQGHEDWV--L 1039
Query: 96 AFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDG 155
+ + L++ S D +K W + +C+D+ H ++V++ VV D ++++ S D
Sbjct: 1040 SLHCTASYLFSTSKDNVIKIWDL--SNFSCIDTLKGHWNSVSSCVVK--DRYLYSGSEDN 1095
Query: 156 SVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWE 209
S+K+W + TL +S + F+N + S + DGSI WE
Sbjct: 1096 SIKVW------DLDTLECVYTIPKSHSLGVKCLMVFNNQII-SAAFDGSIKVWE 1142
Score = 46.6 bits (109), Expect = 3e-04, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 81/195 (41%), Gaps = 32/195 (16%)
Query: 121 KRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKI------WRRVYRENSHTLTMT 174
K CV + + VN+I + + DG+ ++ W+ +Y N H
Sbjct: 857 KDLKCVSTIQSFRERVNSIAFFDNQKLLCAGYGDGTYRVFDVNDNWKCLYTVNGH----- 911
Query: 175 LKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLV 234
+ S+ ++A +S NY +++ S D +I SG L GH V C+V
Sbjct: 912 ----RKSIESIACNS---NY-IFTSSPDNTIKV--HIIRSGNTKCIETLVGHTGEVNCVV 961
Query: 235 AIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYS 294
A EK +FS S D TI+VW + + E + H ++ LA S G ++S
Sbjct: 962 ANEKYLFSCSYDKTIKVW---DLSTFKEIKSFEGVHTKYIKTLALS--------GRYLFS 1010
Query: 295 SSLDQTFKVWRVKVM 309
DQ VW + +
Sbjct: 1011 GGNDQIIYVWDTETL 1025
>sp|Q9UKB1|FBW1B_HUMAN F-box/WD repeat-containing protein 11 OS=Homo sapiens GN=FBXW11
PE=1 SV=1
Length = 542
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 107/236 (45%), Gaps = 28/236 (11%)
Query: 93 SCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCS 152
S + + E ++ TGS D TV+ W V +++ + H N + + +G + TCS
Sbjct: 282 SVLCLQYDERVIVTGSSDSTVRVWDV--NTGEVLNTLIHH--NEAVLHLRFSNGLMVTCS 337
Query: 153 SDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDK 212
D S+ +W + TL L +++VN + FD+ ++ S S D +I W
Sbjct: 338 KDRSIAVWD-MASATDITLRRVLVGHRAAVNVVD----FDDKYIVSASGDRTIKVWS--- 389
Query: 213 MSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRG 272
+ L GH + CL ++L+ SGS D TIR+W G CL VL+GH
Sbjct: 390 -TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA----CLRVLEGHEE 444
Query: 273 PVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQE---KTMCLDYSDYHS 325
VRC+ + +++V G + D KVW ++ D T+CL HS
Sbjct: 445 LVRCI--RFDNKRIVSG------AYDGKIKVWDLQAALDPRAPASTLCLRTLVEHS 492
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 124/317 (39%), Gaps = 54/317 (17%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSDN 61
+ +G I++W + + G V + + ++ T + D +R+W+ +
Sbjct: 253 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEV 312
Query: 62 FRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDK 121
NT H + V + F + GL+ T S D+++ W +
Sbjct: 313 L--------------------NTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASA 350
Query: 122 R-CTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQS 180
T V H + VN VV+ DD ++ + S D ++K+W ++ TL +
Sbjct: 351 TDITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVW----STSTCEFVRTLNGHKR 404
Query: 181 SVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLI 240
+ L + + + SGSSD +I W D G L+GH V C+ K I
Sbjct: 405 GIACLQ----YRDRLVVSGSSDNTIRLW--DIECGACLR--VLEGHEELVRCIRFDNKRI 456
Query: 241 FSGSEDTTIRVW-------RRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVY 293
SG+ D I+VW RA CL L H G V L+ ++ F +
Sbjct: 457 VSGAYDGKIKVWDLQAALDPRAPASTL--CLRTLVEHSGRV----FRLQFDE----FQII 506
Query: 294 SSSLDQTFKVWRVKVMP 310
SSS D T +W +P
Sbjct: 507 SSSHDDTILIWDFLNVP 523
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 97/271 (35%), Gaps = 64/271 (23%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN-----------MLFTTNKDC 49
++ TGSS + +RVW GEV L H N ++ T +KD
Sbjct: 292 VIVTGSSDSTVRVW-----------DVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDR 340
Query: 50 KIRIWNFTVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSF 109
I +W+ + + ++V HR V+ + F + + + S
Sbjct: 341 SIAVWDMASATDITLRRVLV-----------------GHRAAVNVVDF--DDKYIVSASG 381
Query: 110 DKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSH 169
D+T+K W C V + H+ + + D V + SSD ++++W
Sbjct: 382 DRTIKVWST--STCEFVRTLNGHKRGIACL--QYRDRLVVSGSSDNTIRLWDI----ECG 433
Query: 170 TLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFA 229
L+ + V + FDN + SG+ DG I W+ + + C
Sbjct: 434 ACLRVLEGHEELVRCIR----FDNKRIVSGAYDGKIKVWD---LQAALDPRAPASTLCLR 486
Query: 230 VLC--------LVAIEKLIFSGSEDTTIRVW 252
L L E I S S D TI +W
Sbjct: 487 TLVEHSGRVFRLQFDEFQIISSSHDDTILIW 517
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 16/114 (14%)
Query: 191 FDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIR 250
+D+ + SG D SI W+K + L GH +VLCL E++I +GS D+T+R
Sbjct: 248 YDDEKIISGLRDNSIKIWDKTSLECL----KVLTGHTGSVLCLQYDERVIVTGSSDSTVR 303
Query: 251 VWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
VW G E L L H V L S L+ + S D++ VW
Sbjct: 304 VWDVNTG----EVLNTLIHHNEAVLHLRFS--------NGLMVTCSKDRSIAVW 345
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 229 AVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVM 288
V CL ++ I SG D +I++W + ECL VL GH G V CL E+V++
Sbjct: 242 GVYCLQYDDEKIISGLRDNSIKIWDKTS----LECLKVLTGHTGSVLCLQYD---ERVIV 294
Query: 289 GFLVYSSSLDQTFKVWRV 306
+ S D T +VW V
Sbjct: 295 -----TGSSDSTVRVWDV 307
Score = 40.4 bits (93), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 77/192 (40%), Gaps = 40/192 (20%)
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
DD + + D S+KIW + E LT SV L +D + +GSSD
Sbjct: 249 DDEKIISGLRDNSIKIWDKTSLECLKVLT----GHTGSVLCLQ----YDERVIVTGSSDS 300
Query: 204 SINFWEKDKMSGGFNHGGFLQG---HCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCY 260
++ W+ N G L H AVL L L+ + S+D +I VW A
Sbjct: 301 TVRVWD-------VNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDI 353
Query: 261 HECLAVLDGHRGPVRCLAASLEMEKVVMGF---LVYSSSLDQTFKVWR------VKVMPD 311
VL GHR V V+ F + S+S D+T KVW V+ +
Sbjct: 354 -TLRRVLVGHRAAVN-----------VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNG 401
Query: 312 QEKTM-CLDYSD 322
++ + CL Y D
Sbjct: 402 HKRGIACLQYRD 413
>sp|Q5SRY7|FBW1B_MOUSE F-box/WD repeat-containing protein 11 OS=Mus musculus GN=Fbxw11
PE=1 SV=1
Length = 542
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 107/236 (45%), Gaps = 28/236 (11%)
Query: 93 SCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCS 152
S + + E ++ TGS D TV+ W V +++ + H N + + +G + TCS
Sbjct: 282 SVLCLQYDERVIVTGSSDSTVRVWDV--NTGEVLNTLIHH--NEAVLHLRFSNGLMVTCS 337
Query: 153 SDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDK 212
D S+ +W + TL L +++VN + FD+ ++ S S D +I W
Sbjct: 338 KDRSIAVWD-MASATDITLRRVLVGHRAAVNVVD----FDDKYIVSASGDRTIKVWS--- 389
Query: 213 MSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRG 272
+ L GH + CL ++L+ SGS D TIR+W G CL VL+GH
Sbjct: 390 -TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA----CLRVLEGHEE 444
Query: 273 PVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQE---KTMCLDYSDYHS 325
VRC+ + +++V G + D KVW ++ D T+CL HS
Sbjct: 445 LVRCI--RFDNKRIVSG------AYDGKIKVWDLQAALDPRAPASTLCLRTLVEHS 492
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 124/317 (39%), Gaps = 54/317 (17%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSDN 61
+ +G I++W + + G V + + ++ T + D +R+W+ +
Sbjct: 253 IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEV 312
Query: 62 FRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDK 121
NT H + V + F + GL+ T S D+++ W +
Sbjct: 313 L--------------------NTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASA 350
Query: 122 R-CTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQS 180
T V H + VN VV+ DD ++ + S D ++K+W ++ TL +
Sbjct: 351 TDITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVW----STSTCEFVRTLNGHKR 404
Query: 181 SVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLI 240
+ L + + + SGSSD +I W D G L+GH V C+ K I
Sbjct: 405 GIACLQ----YRDRLVVSGSSDNTIRLW--DIECGACLR--VLEGHEELVRCIRFDNKRI 456
Query: 241 FSGSEDTTIRVW-------RRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVY 293
SG+ D I+VW RA CL L H G V L+ ++ F +
Sbjct: 457 VSGAYDGKIKVWDLQAALDPRAPASTL--CLRTLVEHSGRV----FRLQFDE----FQII 506
Query: 294 SSSLDQTFKVWRVKVMP 310
SSS D T +W +P
Sbjct: 507 SSSHDDTILIWDFLNVP 523
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 97/271 (35%), Gaps = 64/271 (23%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN-----------MLFTTNKDC 49
++ TGSS + +RVW GEV L H N ++ T +KD
Sbjct: 292 VIVTGSSDSTVRVW-----------DVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDR 340
Query: 50 KIRIWNFTVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSF 109
I +W+ + + ++V HR V+ + F + + + S
Sbjct: 341 SIAVWDMASATDITLRRVLV-----------------GHRAAVNVVDF--DDKYIVSASG 381
Query: 110 DKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSH 169
D+T+K W C V + H+ + + D V + SSD ++++W
Sbjct: 382 DRTIKVWST--STCEFVRTLNGHKRGIACL--QYRDRLVVSGSSDNTIRLW----DIECG 433
Query: 170 TLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFA 229
L+ + V + FDN + SG+ DG I W+ + + C
Sbjct: 434 ACLRVLEGHEELVRCIR----FDNKRIVSGAYDGKIKVWD---LQAALDPRAPASTLCLR 486
Query: 230 VLC--------LVAIEKLIFSGSEDTTIRVW 252
L L E I S S D TI +W
Sbjct: 487 TLVEHSGRVFRLQFDEFQIISSSHDDTILIW 517
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 16/114 (14%)
Query: 191 FDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIR 250
+D+ + SG D SI W+K + L GH +VLCL E++I +GS D+T+R
Sbjct: 248 YDDDKIISGLRDNSIKIWDKSSLECL----KVLTGHTGSVLCLQYDERVIVTGSSDSTVR 303
Query: 251 VWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
VW G E L L H V L S L+ + S D++ VW
Sbjct: 304 VWDVNTG----EVLNTLIHHNEAVLHLRFS--------NGLMVTCSKDRSIAVW 345
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 229 AVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVM 288
V CL + I SG D +I++W ++ ECL VL GH G V CL E+V++
Sbjct: 242 GVYCLQYDDDKIISGLRDNSIKIWDKSS----LECLKVLTGHTGSVLCLQYD---ERVIV 294
Query: 289 GFLVYSSSLDQTFKVWRV 306
+ S D T +VW V
Sbjct: 295 -----TGSSDSTVRVWDV 307
Score = 40.0 bits (92), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 77/192 (40%), Gaps = 40/192 (20%)
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
DD + + D S+KIW + E LT SV L +D + +GSSD
Sbjct: 249 DDDKIISGLRDNSIKIWDKSSLECLKVLT----GHTGSVLCLQ----YDERVIVTGSSDS 300
Query: 204 SINFWEKDKMSGGFNHGGFLQG---HCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCY 260
++ W+ N G L H AVL L L+ + S+D +I VW A
Sbjct: 301 TVRVWD-------VNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDI 353
Query: 261 HECLAVLDGHRGPVRCLAASLEMEKVVMGF---LVYSSSLDQTFKVWR------VKVMPD 311
VL GHR V V+ F + S+S D+T KVW V+ +
Sbjct: 354 -TLRRVLVGHRAAVN-----------VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNG 401
Query: 312 QEKTM-CLDYSD 322
++ + CL Y D
Sbjct: 402 HKRGIACLQYRD 413
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 121/270 (44%), Gaps = 44/270 (16%)
Query: 40 NMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYH 99
+ML + + D +R+W+ + S +T Q H + V+ +AF
Sbjct: 1255 SMLASGSSDKTVRLWDISSSKCL--------------------HTFQGHTNWVNSVAFNP 1294
Query: 100 AEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKI 159
+L +GS D+TV+ W + + C+ +F H S V+++ + D + + S D +V++
Sbjct: 1295 DGSMLASGSGDQTVRLWEISSSK--CLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRL 1352
Query: 160 WRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNH 219
W E +T + V ++ S D L SGS D ++ W +
Sbjct: 1353 WSISSGECLYTFLGHTNW----VGSVIFSP--DGAILASGSGDQTVRLWSISSGKCLYT- 1405
Query: 220 GGFLQGHCFAVLCLV--AIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCL 277
LQGH V +V L+ SGS+D T+R+W + G ECL L GH VR +
Sbjct: 1406 ---LQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSG----ECLYTLHGHINSVRSV 1458
Query: 278 AASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
A S + G ++ S S D+T K+W VK
Sbjct: 1459 AFSSD------GLILASGSDDETIKLWDVK 1482
Score = 78.6 bits (192), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 105/225 (46%), Gaps = 28/225 (12%)
Query: 86 QQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDD 145
Q H V+ + F L +GS D+TV+ W + +C C +F H S VN++V N D
Sbjct: 1197 QGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLC--TFQGHTSWVNSVVFNPDG 1254
Query: 146 GFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSS--VNALALSSFFDNYFLYSGSSDG 203
+ + SSD +V++W + HT FQ + VN++A + D L SGS D
Sbjct: 1255 SMLASGSSDKTVRLWDISSSKCLHT------FQGHTNWVNSVAFNP--DGSMLASGSGDQ 1306
Query: 204 SINFWEKDKMSGGFNHGGFLQGHCFAV--LCLVAIEKLIFSGSEDTTIRVWRRAEGGCYH 261
++ WE S H QGH V + ++ SGS+D T+R+W + G
Sbjct: 1307 TVRLWEIS--SSKCLHT--FQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSG---- 1358
Query: 262 ECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRV 306
ECL GH V + S + G ++ S S DQT ++W +
Sbjct: 1359 ECLYTFLGHTNWVGSVIFSPD------GAILASGSGDQTVRLWSI 1397
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 24/221 (10%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H V+ + F +L +GS D+TV+ W + + C+ +F H S V ++V + +
Sbjct: 905 HNSWVNSVGFSQDGKMLASGSDDQTVRLWDISSGQ--CLKTFKGHTSRVRSVVFSPNSLM 962
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ + SSD +V++W E + FQ + +++ D L +GS D ++
Sbjct: 963 LASGSSDQTVRLWDISSGECLYI------FQGHTGWVYSVAFNLDGSMLATGSGDQTVRL 1016
Query: 208 WEKDKMSGGFNHGGFLQGH--CFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLA 265
W+ + QGH C + + ++ SGS+D T+R+W + G CL
Sbjct: 1017 WDISSSQCFY----IFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSG----NCLY 1068
Query: 266 VLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRV 306
L GH VR + S + G ++ S DQ ++W +
Sbjct: 1069 TLQGHTSCVRSVVFSPD------GAMLASGGDDQIVRLWDI 1103
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 137/334 (41%), Gaps = 52/334 (15%)
Query: 1 MVFTGSSSTRIRVW--RQPDCVERGFIKARHGEVRAILAHDN--MLFTTNKDCKIRIWN- 55
M+ +GS +R+W C++ K VR+++ N ML + + D +R+W+
Sbjct: 920 MLASGSDDQTVRLWDISSGQCLKT--FKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDI 977
Query: 56 ----------------FTVSDNFRTKKVTTLPRRSSFLSFSKSNTQ-----QQHRDCVSC 94
++V+ N + T + + S++Q Q H CV
Sbjct: 978 SSGECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRS 1037
Query: 95 MAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSD 154
+ F +L +GS D+TV+ W + C+ + H S V ++V + D + + D
Sbjct: 1038 VVFSSDGAMLASGSDDQTVRLWDI--SSGNCLYTLQGHTSCVRSVVFSPDGAMLASGGDD 1095
Query: 155 GSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMS 214
V++W +S TL+ S V L S + L +GSSD + W+
Sbjct: 1096 QIVRLWDI----SSGNCLYTLQGYTSWVRFLVFSP--NGVTLANGSSDQIVRLWDISSKK 1149
Query: 215 GGFNHGGFLQGHCFAV--LCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRG 272
+ LQGH V + + SGS D T+R+W + +CL +L GH
Sbjct: 1150 CLYT----LQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSS----KCLYILQGHTS 1201
Query: 273 PVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRV 306
V + + + G + S S DQT ++W +
Sbjct: 1202 WVNSVVFNPD------GSTLASGSSDQTVRLWEI 1229
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 110/266 (41%), Gaps = 42/266 (15%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVR-----AILAHDNMLFTTNKDCKIRIWN 55
M+ +GSS +R+W D + G A +ML + + D +R+W
Sbjct: 1256 MLASGSSDKTVRLW---DISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWE 1312
Query: 56 FTVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKA 115
+ S +T Q H VS + F +L +GS D+TV+
Sbjct: 1313 ISSSKCL--------------------HTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRL 1352
Query: 116 WRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTL 175
W + C+ +F+ H + V +++ + D + + S D +V++W +S TL
Sbjct: 1353 WSI--SSGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSI----SSGKCLYTL 1406
Query: 176 KFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLV- 234
+ + V ++ S D L SGS D ++ W + L GH +V +
Sbjct: 1407 QGHNNWVGSIVFSP--DGTLLASGSDDQTVRLWNISSGECLYT----LHGHINSVRSVAF 1460
Query: 235 AIEKLIF-SGSEDTTIRVWRRAEGGC 259
+ + LI SGS+D TI++W G C
Sbjct: 1461 SSDGLILASGSDDETIKLWDVKTGEC 1486
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 18/118 (15%)
Query: 192 DNYFLYSGSSDGSINFWEK---DKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTT 248
D +G S G + FWE ++ H ++ F+ K++ SGS+D T
Sbjct: 875 DGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWVNSVGFS-----QDGKMLASGSDDQT 929
Query: 249 IRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRV 306
+R+W + G +CL GH VR + S ++ S S DQT ++W +
Sbjct: 930 VRLWDISSG----QCLKTFKGHTSRVRSVVFSPN------SLMLASGSSDQTVRLWDI 977
>sp|Q09990|LIN23_CAEEL F-box/WD repeat-containing protein lin-23 OS=Caenorhabditis elegans
GN=lin-23 PE=1 SV=2
Length = 665
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 109/234 (46%), Gaps = 29/234 (12%)
Query: 79 FSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAH-ESNVN 137
+S S H V C+ + + ++ +GS D TV+ W V + C+ + + H E+ ++
Sbjct: 252 YSCSRILSGHTGSVLCLQYDNR--VIISGSSDATVRVWDV--ETGECIKTLIHHCEAVLH 307
Query: 138 AIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLY 197
N G + TCS D S+ +W V + T+ L +++VN + FD+ ++
Sbjct: 308 LRFAN---GIMVTCSKDRSIAVWDMVSPRDI-TIRRVLVGHRAAVNVVD----FDDRYIV 359
Query: 198 SGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEG 257
S S D +I W D + L GH + CL +L+ SGS D TIR+W G
Sbjct: 360 SASGDRTIKVWSMDTLE----FVRTLAGHRRGIACLQYRGRLVVSGSSDNTIRLWDIHSG 415
Query: 258 GCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPD 311
CL VL+GH VRC+ + +++V G + D KVW ++ D
Sbjct: 416 ----VCLRVLEGHEELVRCI--RFDEKRIVSG------AYDGKIKVWDLQAALD 457
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 119/313 (38%), Gaps = 58/313 (18%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSDN 61
+ +G I++W + D + G V + + ++ + + D +R+W+ +
Sbjct: 235 IVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYDNRVIISGSSDATVRVWDVETGEC 294
Query: 62 FRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDK 121
+T C + + A G++ T S D+++ W ++
Sbjct: 295 IKTLI----------------------HHCEAVLHLRFANGIMVTCSKDRSIAVWDMVSP 332
Query: 122 R-CTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQS 180
R T V H + VN VV+ DD ++ + S D ++K+W ++ TL +
Sbjct: 333 RDITIRRVLVGHRAAVN--VVDFDDRYIVSASGDRTIKVWSM----DTLEFVRTLAGHRR 386
Query: 181 SVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGG----FLQGHCFAVLCLVAI 236
+ L + + SGSSD +I W+ H G L+GH V C+
Sbjct: 387 GIACLQ----YRGRLVVSGSSDNTIRLWDI--------HSGVCLRVLEGHEELVRCIRFD 434
Query: 237 EKLIFSGSEDTTIRVWR-----RAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFL 291
EK I SG+ D I+VW CL L H G V L F
Sbjct: 435 EKRIVSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQFD--------DFQ 486
Query: 292 VYSSSLDQTFKVW 304
+ SSS D T +W
Sbjct: 487 IVSSSHDDTILIW 499
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 191 FDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIR 250
+D+ + SG D +I W++ ++ L GH +VLCL ++I SGS D T+R
Sbjct: 230 YDDDKIVSGLRDNTIKIWDRKD----YSCSRILSGHTGSVLCLQYDNRVIISGSSDATVR 285
Query: 251 VWRRAEGGC----YHECLAVL 267
VW G C H C AVL
Sbjct: 286 VWDVETGECIKTLIHHCEAVL 306
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 71/169 (42%), Gaps = 27/169 (15%)
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
DD + + D ++KIW R ++ + L SV L +DN + SGSSD
Sbjct: 231 DDDKIVSGLRDNTIKIWDR----KDYSCSRILSGHTGSVLCLQ----YDNRVIISGSSDA 282
Query: 204 SINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHEC 263
++ W D +G L HC AVL L ++ + S+D +I VW
Sbjct: 283 TVRVW--DVETGECIKT--LIHHCEAVLHLRFANGIMVTCSKDRSIAVWDMVSPRDI-TI 337
Query: 264 LAVLDGHRGPVRCLAASLEMEKVVMGF---LVYSSSLDQTFKVWRVKVM 309
VL GHR V V+ F + S+S D+T KVW + +
Sbjct: 338 RRVLVGHRAAVN-----------VVDFDDRYIVSASGDRTIKVWSMDTL 375
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 92/239 (38%), Gaps = 42/239 (17%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGF-IKARHGEVRAILA---HDNMLFTTNKDCKIRIWNF 56
++ +GSS +RVW VE G IK A+L + ++ T +KD I +W+
Sbjct: 274 VIISGSSDATVRVWD----VETGECIKTLIHHCEAVLHLRFANGIMVTCSKDRSIAVWDM 329
Query: 57 TVSDNFRTKKVTTLPRRS-----------------------SFLSFSKSNTQQQHRDCVS 93
+ ++V R + S + T HR ++
Sbjct: 330 VSPRDITIRRVLVGHRAAVNVVDFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIA 389
Query: 94 CMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSS 153
C+ + L+ +GS D T++ W + C+ HE V I D+ + + +
Sbjct: 390 CLQYRGR--LVVSGSSDNTIRLWDI--HSGVCLRVLEGHEELVRCIRF--DEKRIVSGAY 443
Query: 154 DGSVKIWRRVYRENSHTLTMTL---KFQQSSVNALALSSFFDNYFLYSGSSDGSINFWE 209
DG +K+W + L+ + Q + L FD++ + S S D +I W+
Sbjct: 444 DGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQ--FDDFQIVSSSHDDTILIWD 500
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 229 AVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVM 288
V CL + I SG D TI++W R + + C +L GH G V CL
Sbjct: 224 GVYCLQYDDDKIVSGLRDNTIKIWDRKD----YSCSRILSGHTGSVLCLQYD-------- 271
Query: 289 GFLVYSSSLDQTFKVWRVK 307
++ S S D T +VW V+
Sbjct: 272 NRVIISGSSDATVRVWDVE 290
>sp|Q3ULA2|FBW1A_MOUSE F-box/WD repeat-containing protein 1A OS=Mus musculus GN=Btrc PE=1
SV=2
Length = 605
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 106/236 (44%), Gaps = 28/236 (11%)
Query: 93 SCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCS 152
S + + E ++ TGS D TV+ W V +++ + H V + N +G + TCS
Sbjct: 345 SVLCLQYDERVIITGSSDSTVRVWDV--NAGEMLNTLIHHCEAVLHLRFN--NGMMVTCS 400
Query: 153 SDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDK 212
D S+ +W + TL L +++VN + FD+ ++ S S D +I W
Sbjct: 401 KDRSIAVWD-MASPTDITLRRVLVGHRAAVNVVD----FDDKYIVSASGDRTIKVWN--- 452
Query: 213 MSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRG 272
+ L GH + CL ++L+ SGS D TIR+W G CL VL+GH
Sbjct: 453 -TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA----CLRVLEGHEE 507
Query: 273 PVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQEK---TMCLDYSDYHS 325
VRC+ + +++V G + D KVW + D T+CL HS
Sbjct: 508 LVRCI--RFDNKRIVSG------AYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHS 555
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 123/313 (39%), Gaps = 58/313 (18%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSDN 61
+ +G I++W + + + G V + + ++ T + D +R+W+ +
Sbjct: 316 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEM 375
Query: 62 FRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDK 121
NT H C + + G++ T S D+++ W +
Sbjct: 376 L--------------------NTLIHH--CEAVLHLRFNNGMMVTCSKDRSIAVWDMASP 413
Query: 122 R-CTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHT--LTMTLKFQ 178
T V H + VN VV+ DD ++ + S D ++K+W N+ T TL
Sbjct: 414 TDITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVW------NTSTCEFVRTLNGH 465
Query: 179 QSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK 238
+ + L + + + SGSSD +I W D G L+GH V C+ K
Sbjct: 466 KRGIACLQ----YRDRLVVSGSSDNTIRLW--DIECGACLR--VLEGHEELVRCIRFDNK 517
Query: 239 LIFSGSEDTTIRVW-------RRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFL 291
I SG+ D I+VW RA G CL L H G V L+ ++ F
Sbjct: 518 RIVSGAYDGKIKVWDLMAALDPRAPAGTL--CLRTLVEHSGRV----FRLQFDE----FQ 567
Query: 292 VYSSSLDQTFKVW 304
+ SSS D T +W
Sbjct: 568 IVSSSHDDTILIW 580
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 191 FDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIR 250
+D+ + SG D +I W+K + L GH +VLCL E++I +GS D+T+R
Sbjct: 311 YDDQKIVSGLRDNTIKIWDKSTLECK----RILTGHTGSVLCLQYDERVIITGSSDSTVR 366
Query: 251 VWRRAEG----GCYHECLAVL 267
VW G H C AVL
Sbjct: 367 VWDVNAGEMLNTLIHHCEAVL 387
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 98/258 (37%), Gaps = 38/258 (14%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN-MLFTTNKDCKIRIWNFTVS 59
++ TGSS + +RVW + E H E L +N M+ T +KD I +W+
Sbjct: 355 VIITGSSDSTVRVW-DVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASP 413
Query: 60 DNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVL 119
+ ++V HR V+ + F + + + S D+T+K W
Sbjct: 414 TDITLRRVLV-----------------GHRAAVNVVDF--DDKYIVSASGDRTIKVWNT- 453
Query: 120 DKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQ 179
C V + H+ + + D V + SSD ++++W L+ +
Sbjct: 454 -STCEFVRTLNGHKRGIACL--QYRDRLVVSGSSDNTIRLWDI----ECGACLRVLEGHE 506
Query: 180 SSVNALALSSFFDNYFLYSGSSDGSINFWE-----KDKMSGGFNHGGFLQGHCFAVLCLV 234
V + FDN + SG+ DG I W+ + G L H V L
Sbjct: 507 ELVRCIR----FDNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQ 562
Query: 235 AIEKLIFSGSEDTTIRVW 252
E I S S D TI +W
Sbjct: 563 FDEFQIVSSSHDDTILIW 580
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 82/203 (40%), Gaps = 40/203 (19%)
Query: 133 ESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFD 192
E++ + DD + + D ++KIW + E LT SV L +D
Sbjct: 301 ETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILT----GHTGSVLCLQ----YD 352
Query: 193 NYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQG---HCFAVLCLVAIEKLIFSGSEDTTI 249
+ +GSSD ++ W+ N G L HC AVL L ++ + S+D +I
Sbjct: 353 ERVIITGSSDSTVRVWD-------VNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSI 405
Query: 250 RVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGF---LVYSSSLDQTFKVWR- 305
VW A VL GHR V V+ F + S+S D+T KVW
Sbjct: 406 AVWDMASPTDI-TLRRVLVGHRAAVN-----------VVDFDDKYIVSASGDRTIKVWNT 453
Query: 306 -----VKVMPDQEKTM-CLDYSD 322
V+ + ++ + CL Y D
Sbjct: 454 STCEFVRTLNGHKRGIACLQYRD 476
>sp|Q9Y297|FBW1A_HUMAN F-box/WD repeat-containing protein 1A OS=Homo sapiens GN=BTRC PE=1
SV=1
Length = 605
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 106/236 (44%), Gaps = 28/236 (11%)
Query: 93 SCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCS 152
S + + E ++ TGS D TV+ W V +++ + H V + N +G + TCS
Sbjct: 345 SVLCLQYDERVIITGSSDSTVRVWDV--NTGEMLNTLIHHCEAVLHLRFN--NGMMVTCS 400
Query: 153 SDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDK 212
D S+ +W + TL L +++VN + FD+ ++ S S D +I W
Sbjct: 401 KDRSIAVWD-MASPTDITLRRVLVGHRAAVNVVD----FDDKYIVSASGDRTIKVWN--- 452
Query: 213 MSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRG 272
+ L GH + CL ++L+ SGS D TIR+W G CL VL+GH
Sbjct: 453 -TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA----CLRVLEGHEE 507
Query: 273 PVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQEK---TMCLDYSDYHS 325
VRC+ + +++V G + D KVW + D T+CL HS
Sbjct: 508 LVRCI--RFDNKRIVSG------AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHS 555
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 123/313 (39%), Gaps = 58/313 (18%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSDN 61
+ +G I++W + + + G V + + ++ T + D +R+W+ +
Sbjct: 316 IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEM 375
Query: 62 FRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDK 121
NT H C + + G++ T S D+++ W +
Sbjct: 376 L--------------------NTLIHH--CEAVLHLRFNNGMMVTCSKDRSIAVWDMASP 413
Query: 122 R-CTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHT--LTMTLKFQ 178
T V H + VN VV+ DD ++ + S D ++K+W N+ T TL
Sbjct: 414 TDITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVW------NTSTCEFVRTLNGH 465
Query: 179 QSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK 238
+ + L + + + SGSSD +I W D G L+GH V C+ K
Sbjct: 466 KRGIACLQ----YRDRLVVSGSSDNTIRLW--DIECGACLR--VLEGHEELVRCIRFDNK 517
Query: 239 LIFSGSEDTTIRVW-------RRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFL 291
I SG+ D I+VW RA G CL L H G V L+ ++ F
Sbjct: 518 RIVSGAYDGKIKVWDLVAALDPRAPAGTL--CLRTLVEHSGRV----FRLQFDE----FQ 567
Query: 292 VYSSSLDQTFKVW 304
+ SSS D T +W
Sbjct: 568 IVSSSHDDTILIW 580
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 191 FDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIR 250
+D+ + SG D +I W+K+ + L GH +VLCL E++I +GS D+T+R
Sbjct: 311 YDDQKIVSGLRDNTIKIWDKNTLECK----RILTGHTGSVLCLQYDERVIITGSSDSTVR 366
Query: 251 VWRRAEG----GCYHECLAVL 267
VW G H C AVL
Sbjct: 367 VWDVNTGEMLNTLIHHCEAVL 387
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 98/258 (37%), Gaps = 38/258 (14%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN-MLFTTNKDCKIRIWNFTVS 59
++ TGSS + +RVW + E H E L +N M+ T +KD I +W+
Sbjct: 355 VIITGSSDSTVRVW-DVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASP 413
Query: 60 DNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVL 119
+ ++V HR V+ + F + + + S D+T+K W
Sbjct: 414 TDITLRRVLV-----------------GHRAAVNVVDF--DDKYIVSASGDRTIKVWNT- 453
Query: 120 DKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQ 179
C V + H+ + + D V + SSD ++++W L+ +
Sbjct: 454 -STCEFVRTLNGHKRGIACL--QYRDRLVVSGSSDNTIRLW----DIECGACLRVLEGHE 506
Query: 180 SSVNALALSSFFDNYFLYSGSSDGSINFWE-----KDKMSGGFNHGGFLQGHCFAVLCLV 234
V + FDN + SG+ DG I W+ + G L H V L
Sbjct: 507 ELVRCIR----FDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQ 562
Query: 235 AIEKLIFSGSEDTTIRVW 252
E I S S D TI +W
Sbjct: 563 FDEFQIVSSSHDDTILIW 580
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 82/203 (40%), Gaps = 40/203 (19%)
Query: 133 ESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFD 192
E++ + DD + + D ++KIW + E LT SV L +D
Sbjct: 301 ETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILT----GHTGSVLCLQ----YD 352
Query: 193 NYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQG---HCFAVLCLVAIEKLIFSGSEDTTI 249
+ +GSSD ++ W+ N G L HC AVL L ++ + S+D +I
Sbjct: 353 ERVIITGSSDSTVRVWD-------VNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSI 405
Query: 250 RVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGF---LVYSSSLDQTFKVWR- 305
VW A VL GHR V V+ F + S+S D+T KVW
Sbjct: 406 AVWDMASPTDI-TLRRVLVGHRAAVN-----------VVDFDDKYIVSASGDRTIKVWNT 453
Query: 306 -----VKVMPDQEKTM-CLDYSD 322
V+ + ++ + CL Y D
Sbjct: 454 STCEFVRTLNGHKRGIACLQYRD 476
>sp|Q91854|TRCB_XENLA Beta-TrCP OS=Xenopus laevis GN=fbxw1 PE=2 SV=1
Length = 518
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 106/236 (44%), Gaps = 28/236 (11%)
Query: 93 SCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCS 152
S + + E ++ TGS D TV+ W V +++ + H V + N +G + TCS
Sbjct: 274 SVLCLQYDERVIITGSSDSTVRVWDV--NTGEMLNTLIHHCEAVLHLRFN--NGMMVTCS 329
Query: 153 SDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDK 212
D S+ +W + TL L +++VN + FD+ ++ S S D +I W
Sbjct: 330 KDRSIAVWD-MASATDITLRRVLVGHRAAVNVVD----FDDKYIVSASGDRTIKVWN--- 381
Query: 213 MSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRG 272
+ L GH + CL ++L+ SGS D TIR+W G CL VL+GH
Sbjct: 382 -TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA----CLRVLEGHEE 436
Query: 273 PVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQEK---TMCLDYSDYHS 325
VRC+ + +++V G + D KVW + D T+CL HS
Sbjct: 437 LVRCI--RFDNKRIVSG------AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHS 484
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 123/313 (39%), Gaps = 58/313 (18%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSDN 61
+ +G I++W + + + G V + + ++ T + D +R+W+ +
Sbjct: 245 IVSGLRDNTIKIWDKNTLECKRVLMGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEM 304
Query: 62 FRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDK 121
NT H C + + G++ T S D+++ W +
Sbjct: 305 L--------------------NTLIHH--CEAVLHLRFNNGMMVTCSKDRSIAVWDMASA 342
Query: 122 R-CTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHT--LTMTLKFQ 178
T V H + VN VV+ DD ++ + S D ++K+W N+ T TL
Sbjct: 343 TDITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVW------NTSTCEFVRTLNGH 394
Query: 179 QSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK 238
+ + L + + + SGSSD +I W D G L+GH V C+ K
Sbjct: 395 KRGIACLQ----YRDRLVVSGSSDNTIRLW--DIECGACLR--VLEGHEELVRCIRFDNK 446
Query: 239 LIFSGSEDTTIRVW-------RRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFL 291
I SG+ D I+VW RA G CL L H G V L+ ++ F
Sbjct: 447 RIVSGAYDGKIKVWDLVAALDPRAPAGTL--CLRTLVEHSGRV----FRLQFDE----FQ 496
Query: 292 VYSSSLDQTFKVW 304
+ SSS D T +W
Sbjct: 497 IVSSSHDDTILIW 509
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 191 FDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIR 250
+D+ + SG D +I W+K+ + L GH +VLCL E++I +GS D+T+R
Sbjct: 240 YDDQKIVSGLRDNTIKIWDKNTLECK----RVLMGHTGSVLCLQYDERVIITGSSDSTVR 295
Query: 251 VWRRAEG----GCYHECLAVL 267
VW G H C AVL
Sbjct: 296 VWDVNTGEMLNTLIHHCEAVL 316
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 99/258 (38%), Gaps = 38/258 (14%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN-MLFTTNKDCKIRIWNFTVS 59
++ TGSS + +RVW + E H E L +N M+ T +KD I +W+ +
Sbjct: 284 VIITGSSDSTVRVW-DVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASA 342
Query: 60 DNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVL 119
+ ++V HR V+ + F + + + S D+T+K W
Sbjct: 343 TDITLRRVLV-----------------GHRAAVNVVDF--DDKYIVSASGDRTIKVWNT- 382
Query: 120 DKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQ 179
C V + H+ + + D V + SSD ++++W L+ +
Sbjct: 383 -STCEFVRTLNGHKRGIACL--QYRDRLVVSGSSDNTIRLW----DIECGACLRVLEGHE 435
Query: 180 SSVNALALSSFFDNYFLYSGSSDGSINFWE-----KDKMSGGFNHGGFLQGHCFAVLCLV 234
V + FDN + SG+ DG I W+ + G L H V L
Sbjct: 436 ELVRCIR----FDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQ 491
Query: 235 AIEKLIFSGSEDTTIRVW 252
E I S S D TI +W
Sbjct: 492 FDEFQIVSSSHDDTILIW 509
Score = 39.3 bits (90), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 12/78 (15%)
Query: 229 AVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVM 288
V CL ++ I SG D TI++W + EC VL GH G V CL E+V++
Sbjct: 234 GVYCLQYDDQKIVSGLRDNTIKIWDKNT----LECKRVLMGHTGSVLCLQYD---ERVII 286
Query: 289 GFLVYSSSLDQTFKVWRV 306
+ S D T +VW V
Sbjct: 287 -----TGSSDSTVRVWDV 299
>sp|Q5REG7|LIS1_PONAB Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Pongo abelii GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 136/335 (40%), Gaps = 64/335 (19%)
Query: 17 PDCVERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKK-----VTT 69
P E+ + V ++ H +++ + ++D I++W++ D RT K +
Sbjct: 96 PRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSIQD 155
Query: 70 LPRRSS-----------------FLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKT 112
+P S F F T H VS +A + + S DKT
Sbjct: 156 IPFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 113 VKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYR 165
+K W V + CV +F H V + NQD + +CS+D +V++W + R
Sbjct: 216 IKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 166 ENSHTLTMTLKFQQSSVNALALSSFFD-------NYFLYSGSSDGSINFWEKDKMSGGF- 217
E+ H + +SS ++++ ++ + FL SGS D +I W+ +S G
Sbjct: 274 EHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD---VSTGMC 330
Query: 218 -----NHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRG 272
H +++G F + K I S ++D T+RVW C+ L+ H
Sbjct: 331 LMTLVGHDNWVRGVLFH-----SGGKFILSCADDKTLRVWDYKN----KRCMKTLNAHEH 381
Query: 273 PVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
SL+ K V + S+DQT KVW +
Sbjct: 382 ----FVTSLDFHKTAP--YVVTGSVDQTVKVWECR 410
>sp|Q8HXX0|LIS1_MACFA Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Macaca fascicularis GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 134/335 (40%), Gaps = 64/335 (19%)
Query: 17 PDCVERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRS 74
P E+ + V ++ H +++ + ++D I++W++ D RT K T +
Sbjct: 96 PRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQD 155
Query: 75 ----------------------SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKT 112
F F T H VS +A L + S DKT
Sbjct: 156 ISFDHSGKLLTSCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHLVSASRDKT 215
Query: 113 VKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYR 165
+K W V + CV +F H V + NQD + +CS+D +V++W + R
Sbjct: 216 IKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 166 ENSHTLTMTLKFQQSSVNALALSSFFDNY-------FLYSGSSDGSINFWEKDKMSGGF- 217
E+ H + +SS ++++ ++ + FL SGS D +I W+ +S G
Sbjct: 274 EHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD---VSTGMC 330
Query: 218 -----NHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRG 272
H +++G F + K I S ++D T+RVW C+ L+ H
Sbjct: 331 LMTLVGHDNWVRGVLFH-----SGGKFILSCADDKTLRVWDYKN----KRCMKTLNAHEH 381
Query: 273 PVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
SL+ K V + S+DQT KVW +
Sbjct: 382 ----FVTSLDFHKTAP--YVVTGSVDQTVKVWECR 410
>sp|Q8I0F4|LIS1_DICDI Lissencephaly-1 homolog OS=Dictyostelium discoideum GN=lis1 PE=1
SV=1
Length = 419
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 130/347 (37%), Gaps = 87/347 (25%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHD-----NMLFTTNKDCKIRIWN 55
++ + S I+VW D F + G A+ D N+L + + D I++W+
Sbjct: 120 LMVSASEDATIKVW---DFESGEFERTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWD 176
Query: 56 FTVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKA 115
F D +T H VSC+ F + L + S DKT+K
Sbjct: 177 FQTYDCVKT--------------------LHGHDHNVSCVRFTPSGDQLISSSRDKTIKV 216
Query: 116 WRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRV-------YRENS 168
W C + + V HE V I V++D + +CS+D ++K W V YRE+S
Sbjct: 217 WEAATGYC--IKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHS 274
Query: 169 HTLTMTLKFQQSSVNALALSSFFDNY------------------FLYSGSSDGSINFWEK 210
H + L F +++ + S +L +GS D +I WE
Sbjct: 275 HVVEC-LAFSTANIIDIPGSLLSTPEGKSKVKQGPGGNLVGQCGYLATGSRDKTIKIWE- 332
Query: 211 DKMSGGFNHGGFLQGHCFAVLC-----LVAIE-----KLIFSGSEDTTIRVWRRAEGGCY 260
G C A + A+ K + S +D TIRVW A+G C
Sbjct: 333 -----------LATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCI 381
Query: 261 HECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
+ + H + CL L + G +D KVW+++
Sbjct: 382 K---TINEAHTHFISCLDFCLHNPHIATG------GVDDVIKVWKLQ 419
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 84/195 (43%), Gaps = 18/195 (9%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
HR+C++ + F+ + L+ + S D T+K W + H + V I ++
Sbjct: 105 HRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFE--RTLKGHTNAVQDIDFDKTGNL 162
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ +CS+D ++K+W ++ TL +V+ + + D L S S D +I
Sbjct: 163 LASCSADLTIKLWDF----QTYDCVKTLHGHDHNVSCVRFTPSGDQ--LISSSRDKTIKV 216
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KLIFSGSEDTTIRVWRRAEGGCYHECLA 265
WE + G+ + GH V + E I S S D TI+ W +G ECLA
Sbjct: 217 WE---AATGYCIKTLV-GHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKG----ECLA 268
Query: 266 VLDGHRGPVRCLAAS 280
H V CLA S
Sbjct: 269 TYREHSHVVECLAFS 283
>sp|Q5IS43|LIS1_PANTR Platelet-activating factor acetylhydrolase IB subunit alpha OS=Pan
troglodytes GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 133/335 (39%), Gaps = 64/335 (19%)
Query: 17 PDCVERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRS 74
P E+ + V ++ H +++ + ++D I++W++ D RT K T +
Sbjct: 96 PRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQD 155
Query: 75 ----------------------SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKT 112
F F T H VS +A + + S DKT
Sbjct: 156 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 113 VKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYR 165
+K W V + CV +F H V + NQD + +CS+D +V++W + R
Sbjct: 216 IKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 166 ENSHTLTMTLKFQQSSVNALALSSFFDNY-------FLYSGSSDGSINFWEKDKMSGGF- 217
E+ H + +SS ++++ ++ + FL SGS D +I W+ +S G
Sbjct: 274 EHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD---VSTGMC 330
Query: 218 -----NHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRG 272
H +++G F + K I S ++D T+RVW C+ L+ H
Sbjct: 331 LMTLVGHDNWVRGVLFH-----SGGKFILSCADDKTLRVWDYKN----KRCMKTLNAHEH 381
Query: 273 PVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
V L VV GF +DQT KVW +
Sbjct: 382 FVTSLDFHKTAPYVVTGF------VDQTVKVWECR 410
>sp|P63004|LIS1_RAT Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Rattus norvegicus GN=Pafah1b1 PE=1 SV=2
Length = 410
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 134/335 (40%), Gaps = 64/335 (19%)
Query: 17 PDCVERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRS 74
P E+ + V ++ H +++ + ++D I++W++ D RT K T +
Sbjct: 96 PRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQD 155
Query: 75 ----------------------SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKT 112
F F T H VS +A + + S DKT
Sbjct: 156 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 113 VKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYR 165
+K W V + CV +F H V + NQD + +CS+D +V++W + R
Sbjct: 216 IKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 166 ENSHTLTMTLKFQQSSVNALALSSFFDNY-------FLYSGSSDGSINFWEKDKMSGGF- 217
E+ H + +SS ++++ ++ + FL SGS D +I W+ +S G
Sbjct: 274 EHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD---VSTGMC 330
Query: 218 -----NHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRG 272
H +++G F + K I S ++D T+RVW C+ L+ H
Sbjct: 331 LMTLVGHDNWVRGVLFH-----SGGKFILSCADDKTLRVWDYKN----KRCMKTLNAHEH 381
Query: 273 PVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
SL+ K V + S+DQT KVW +
Sbjct: 382 ----FVTSLDFHKTAP--YVVTGSVDQTVKVWECR 410
>sp|P63005|LIS1_MOUSE Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus
musculus GN=Pafah1b1 PE=1 SV=2
Length = 410
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 134/335 (40%), Gaps = 64/335 (19%)
Query: 17 PDCVERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRS 74
P E+ + V ++ H +++ + ++D I++W++ D RT K T +
Sbjct: 96 PRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQD 155
Query: 75 ----------------------SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKT 112
F F T H VS +A + + S DKT
Sbjct: 156 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 113 VKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYR 165
+K W V + CV +F H V + NQD + +CS+D +V++W + R
Sbjct: 216 IKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 166 ENSHTLTMTLKFQQSSVNALALSSFFDNY-------FLYSGSSDGSINFWEKDKMSGGF- 217
E+ H + +SS ++++ ++ + FL SGS D +I W+ +S G
Sbjct: 274 EHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD---VSTGMC 330
Query: 218 -----NHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRG 272
H +++G F + K I S ++D T+RVW C+ L+ H
Sbjct: 331 LMTLVGHDNWVRGVLFH-----SGGKFILSCADDKTLRVWDYKN----KRCMKTLNAHEH 381
Query: 273 PVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
SL+ K V + S+DQT KVW +
Sbjct: 382 ----FVTSLDFHKTAP--YVVTGSVDQTVKVWECR 410
>sp|B0LSW3|LIS1_FELCA Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Felis catus GN=PAFAH1B1 PE=2 SV=1
Length = 410
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 134/335 (40%), Gaps = 64/335 (19%)
Query: 17 PDCVERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRS 74
P E+ + V ++ H +++ + ++D I++W++ D RT K T +
Sbjct: 96 PRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQD 155
Query: 75 ----------------------SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKT 112
F F T H VS +A + + S DKT
Sbjct: 156 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 113 VKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYR 165
+K W V + CV +F H V + NQD + +CS+D +V++W + R
Sbjct: 216 IKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 166 ENSHTLTMTLKFQQSSVNALALSSFFDNY-------FLYSGSSDGSINFWEKDKMSGGF- 217
E+ H + +SS ++++ ++ + FL SGS D +I W+ +S G
Sbjct: 274 EHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD---VSTGMC 330
Query: 218 -----NHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRG 272
H +++G F + K I S ++D T+RVW C+ L+ H
Sbjct: 331 LMTLVGHDNWVRGVLFH-----SGGKFILSCADDKTLRVWDYKN----KRCMKTLNAHEH 381
Query: 273 PVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
SL+ K V + S+DQT KVW +
Sbjct: 382 ----FVTSLDFHKTAP--YVVTGSVDQTVKVWECR 410
>sp|Q6NZH4|LIS1_XENTR Lissencephaly-1 homolog OS=Xenopus tropicalis GN=pafah1b1 PE=2 SV=3
Length = 410
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 132/335 (39%), Gaps = 64/335 (19%)
Query: 17 PDCVERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRS 74
P E+ + V ++ H +++ T ++D I++W++ D RT K T +
Sbjct: 96 PRPPEKYALSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQD 155
Query: 75 ----------------------SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKT 112
F F T H VS +A + + S DKT
Sbjct: 156 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 113 VKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYR 165
+K W V + CV +F H V + NQD + +CS+D +V++W + R
Sbjct: 216 IKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 166 ENSHTLTMTLKFQQSSVNALALSSFFD-------NYFLYSGSSDGSINFWEKDKMSGGF- 217
E+ H + +SS + ++ ++ + FL SGS D +I W+ +S G
Sbjct: 274 EHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWD---ISIGMC 330
Query: 218 -----NHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRG 272
H +++G F K I S ++D TIR+W C+ L+ H
Sbjct: 331 LMTLVGHDNWVRGVQFH-----PGGKFILSCADDKTIRIWDYKN----KRCMKTLNAHEH 381
Query: 273 PVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
SL+ K V + S+DQT KVW +
Sbjct: 382 ----FVTSLDFHKTAP--YVVTGSVDQTVKVWECR 410
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 100/247 (40%), Gaps = 38/247 (15%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
HR V+ + F+ ++ T S D T+K W + + H +V I +
Sbjct: 107 HRSPVTRVIFHPVFSVMVTASEDATIKVWDY--ETGDFERTLKGHTDSVQDISFDHSGKL 164
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ +CS+D ++K+W T+ +V+++A+ D+ + S S D +I
Sbjct: 165 LASCSADMTIKLWDF----QGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKM 218
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK--LIFSGSEDTTIRVWRRAEGGCYHECLA 265
WE + G+ F GH V + + LI S S D T+RVW A EC A
Sbjct: 219 WE---VQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA----TKECKA 270
Query: 266 VLDGHRGPVRCLAASLEMEKVVM--------------GFLVYSSSLDQTFKVWRVKVMPD 311
L H V C++ + E + G + S S D+T K+W + +
Sbjct: 271 ELREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDISI--- 327
Query: 312 QEKTMCL 318
MCL
Sbjct: 328 ---GMCL 331
>sp|P43034|LIS1_HUMAN Platelet-activating factor acetylhydrolase IB subunit alpha OS=Homo
sapiens GN=PAFAH1B1 PE=1 SV=2
Length = 410
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 134/335 (40%), Gaps = 64/335 (19%)
Query: 17 PDCVERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRS 74
P E+ + V ++ H +++ + ++D I++W++ D RT K T +
Sbjct: 96 PRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQD 155
Query: 75 ----------------------SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKT 112
F F T H VS +A + + S DKT
Sbjct: 156 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 113 VKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYR 165
+K W V + CV +F H V + NQD + +CS+D +V++W + R
Sbjct: 216 IKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 166 ENSHTLTMTLKFQQSSVNALALSSFFDNY-------FLYSGSSDGSINFWEKDKMSGGF- 217
E+ H + +SS ++++ ++ + FL SGS D +I W+ +S G
Sbjct: 274 EHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD---VSTGMC 330
Query: 218 -----NHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRG 272
H +++G F + K I S ++D T+RVW C+ L+ H
Sbjct: 331 LMTLVGHDNWVRGVLFH-----SGGKFILSCADDKTLRVWDYKN----KRCMKTLNAHEH 381
Query: 273 PVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
SL+ K V + S+DQT KVW +
Sbjct: 382 ----FVTSLDFHKTAP--YVVTGSVDQTVKVWECR 410
>sp|P43033|LIS1_BOVIN Platelet-activating factor acetylhydrolase IB subunit alpha OS=Bos
taurus GN=PAFAH1B1 PE=1 SV=2
Length = 410
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 134/335 (40%), Gaps = 64/335 (19%)
Query: 17 PDCVERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKKVTT----- 69
P E+ + V ++ H +++ + ++D I++W++ D RT K T
Sbjct: 96 PRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVED 155
Query: 70 -----------------LPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKT 112
+ F F T H VS +A + + S DKT
Sbjct: 156 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 113 VKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYR 165
+K W V + CV +F H V + NQD + +CS+D +V++W + R
Sbjct: 216 IKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 166 ENSHTLTMTLKFQQSSVNALALSSFFDNY-------FLYSGSSDGSINFWEKDKMSGGF- 217
E+ H + +SS ++++ ++ + FL SGS D +I W+ +S G
Sbjct: 274 EHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD---VSTGMC 330
Query: 218 -----NHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRG 272
H +++G F + K I S ++D T+RVW C+ L+ H
Sbjct: 331 LMTLVGHDNWVRGVLFH-----SGGKFILSCADDKTLRVWDYKN----KRCMKTLNAHEH 381
Query: 273 PVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
SL+ K V + S+DQT KVW +
Sbjct: 382 ----FVTSLDFHKTAP--YVVTGSVDQTVKVWECR 410
>sp|Q90ZL4|LIS1_XENLA Lissencephaly-1 homolog OS=Xenopus laevis GN=pafah1b1 PE=2 SV=3
Length = 410
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 132/335 (39%), Gaps = 64/335 (19%)
Query: 17 PDCVERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRS 74
P E+ + V ++ H +++ T ++D I++W++ D RT K T +
Sbjct: 96 PRPPEKYALSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQD 155
Query: 75 ----------------------SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKT 112
F F T H VS +A + + S DKT
Sbjct: 156 ISFDHSGKLLASCSADMTIKLWDFQGFECLRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 113 VKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYR 165
+K W V + CV +F H V + NQD + +CS+D +V++W + R
Sbjct: 216 IKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 166 ENSHTLTMTLKFQQSSVNALALSSFFD-------NYFLYSGSSDGSINFWEKDKMSGGF- 217
E+ H + +SS + ++ ++ + FL SGS D +I W+ +S G
Sbjct: 274 EHEHVVECISWAPESSYSTISDATGSETKRSGKPGPFLLSGSRDKTIKMWD---ISIGMC 330
Query: 218 -----NHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRG 272
H +++G F K I S ++D TIR+W C+ L+ H
Sbjct: 331 LMTLVGHDNWVRGVQFH-----PGGKFILSCADDKTIRIWDYKN----KRCMKTLNAHEH 381
Query: 273 PVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
SL+ K V + S+DQT KVW +
Sbjct: 382 ----FVTSLDFHKTAP--YVVTGSVDQTVKVWECR 410
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 100/247 (40%), Gaps = 38/247 (15%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
HR V+ + F+ ++ T S D T+K W + + H +V I +
Sbjct: 107 HRSPVTRVIFHPVFSVMVTASEDATIKVWDY--ETGDFERTLKGHTDSVQDISFDHSGKL 164
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ +CS+D ++K+W T+ +V+++A+ D+ + S S D +I
Sbjct: 165 LASCSADMTIKLWDF----QGFECLRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKM 218
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK--LIFSGSEDTTIRVWRRAEGGCYHECLA 265
WE + G+ F GH V + + LI S S D T+RVW A EC A
Sbjct: 219 WE---VQTGYCVKTF-TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA----TKECKA 270
Query: 266 VLDGHRGPVRCLAASLEMEKVVM--------------GFLVYSSSLDQTFKVWRVKVMPD 311
L H V C++ + E + G + S S D+T K+W + +
Sbjct: 271 ELREHEHVVECISWAPESSYSTISDATGSETKRSGKPGPFLLSGSRDKTIKMWDISI--- 327
Query: 312 QEKTMCL 318
MCL
Sbjct: 328 ---GMCL 331
>sp|Q9PTR5|LIS1_CHICK Lissencephaly-1 homolog OS=Gallus gallus GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 133/335 (39%), Gaps = 64/335 (19%)
Query: 17 PDCVERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRS 74
P E+ + V ++ H +++ + ++D I++W++ D RT K T +
Sbjct: 96 PRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQD 155
Query: 75 ----------------------SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKT 112
F F T H VS +A + + S DKT
Sbjct: 156 ISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 113 VKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYR 165
+K W V + CV +F H V + NQD + +CS+D +V++W + R
Sbjct: 216 IKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 166 ENSHTLTMTLKFQQSSVNALALSSFFDNY-------FLYSGSSDGSINFWEKDKMSGGF- 217
E+ H + +SS + ++ ++ + FL SGS D +I W+ +S G
Sbjct: 274 EHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWD---ISTGMC 330
Query: 218 -----NHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRG 272
H +++G F + K I S ++D T+RVW C+ L+ H
Sbjct: 331 LMTLVGHDNWVRGVLFH-----SGGKFILSCADDKTLRVWDFKN----KRCMKTLNAHEH 381
Query: 273 PVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
SL+ K V + S+DQT KVW +
Sbjct: 382 ----FVTSLDFHKTAP--YVVTGSVDQTVKVWECR 410
>sp|Q9GL51|LIS1_PIG Platelet-activating factor acetylhydrolase IB subunit alpha OS=Sus
scrofa GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 134/335 (40%), Gaps = 64/335 (19%)
Query: 17 PDCVERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRS 74
P E+ + V ++ H +++ + ++D I++W++ D RT K T +
Sbjct: 96 PRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQD 155
Query: 75 ----------------------SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKT 112
F F T H VS +A + + + DKT
Sbjct: 156 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKT 215
Query: 113 VKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYR 165
+K W V + CV +F H V + NQD + +CS+D +V++W + R
Sbjct: 216 IKMWEV--QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 166 ENSHTLTMTLKFQQSSVNALALSSFFDNY-------FLYSGSSDGSINFWEKDKMSGGF- 217
E+ H + +SS ++++ ++ + FL SGS D +I W+ +S G
Sbjct: 274 EHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD---VSTGMC 330
Query: 218 -----NHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRG 272
H +++G F + K I S ++D T+RVW C+ L+ H
Sbjct: 331 LMTLVGHDNWVRGVLFH-----SGGKFILSCADDKTLRVWDYKN----KRCMKTLNAHEH 381
Query: 273 PVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
SL+ K V + S+DQT KVW +
Sbjct: 382 ----FVTSLDFHKTAP--YVVTGSVDQTVKVWECR 410
>sp|A6ZYM0|CIAO1_YEAS7 Probable cytosolic iron-sulfur protein assembly protein 1
OS=Saccharomyces cerevisiae (strain YJM789) GN=CIA1 PE=3
SV=1
Length = 330
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 17/225 (7%)
Query: 96 AFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSF--VAHESNVNAIVVNQDDGFVFTCSS 153
+F ++G+L TGS D+ +K V D T +D AH+ + ++ + S
Sbjct: 19 SFDFSQGILATGSTDRKIKLVSVKDDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSF 78
Query: 154 DGSVKIWRR---VYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEK 210
D +V IW + R L ++ ++ V +A S+ D Y+L + S D S+ WE
Sbjct: 79 DSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSN--DGYYLATCSRDKSVWIWET 136
Query: 211 DKMSGGFNHGGFLQGHCFAVLCLV--AIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLD 268
D+ + LQ H V ++ E L+ S S D T+R+W+ + EC+AVL+
Sbjct: 137 DESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDW--ECVAVLN 194
Query: 269 GHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQE 313
GH G V S + +K F + S S D T +VW K M D E
Sbjct: 195 GHEGTVW----SSDFDKTEGVFRLCSGSDDSTVRVW--KYMGDDE 233
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 72/172 (41%), Gaps = 27/172 (15%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGF-------IKARHGEVRAILAHDN--MLFTTNKDCKI 51
++ GS + + +W + + +R F I+ EV+ + ++ L T ++D +
Sbjct: 72 LLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSV 131
Query: 52 RIWNFTVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDK 111
IW S + + Q+H V + ++ +E LL + S+D
Sbjct: 132 WIW----------------ETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDD 175
Query: 112 TVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSS--DGSVKIWR 161
TV+ W+ D CV HE V + ++ +G CS D +V++W+
Sbjct: 176 TVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWK 227
>sp|Q0DYP5|C3H17_ORYSJ Zinc finger CCCH domain-containing protein 17 OS=Oryza sativa
subsp. japonica GN=Os02g0677700 PE=2 SV=2
Length = 435
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 105/258 (40%), Gaps = 32/258 (12%)
Query: 86 QQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDD 145
Q H V+ +A LY+GS D TV+ W +C V + + ++ +
Sbjct: 147 QGHEKVVTGIALPAGSDKLYSGSKDGTVRMWDCQTGQCAGV---INMGREIGCMI--SEG 201
Query: 146 GFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSI 205
++F D +VK+W + M L V ALA+ N L++ + DG I
Sbjct: 202 PWLFVGIPD-AVKVWNMQTQAE-----MNLTGPTGQVYALAVG----NELLFAATQDGRI 251
Query: 206 NFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLA 265
W + GF L GH AV+ LV ++S S D TIRVW A +C+
Sbjct: 252 LAWRFSAATNGFEPAASLVGHQLAVVSLVVGAMRLYSASMDKTIRVWDLAT----LQCIQ 307
Query: 266 VLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQEKTMCLDYSDYHS 325
L H G V M + + S SLDQT KVW + ++ + Y+
Sbjct: 308 TLSDHTGVV--------MSVLCWDQFLLSCSLDQTIKVWAAT----ESGSLEVTYTHKEE 355
Query: 326 NSKTTTTKM-DYEMSPVL 342
+ + M D + PVL
Sbjct: 356 HGALALSGMPDAQSKPVL 373
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 103/250 (41%), Gaps = 42/250 (16%)
Query: 11 IRVWRQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSDNFRTKKVTTL 70
++VW E + G+V A+ + +LF +D +I W F+ + N
Sbjct: 212 VKVWNMQTQAEMN-LTGPTGQVYALAVGNELLFAATQDGRILAWRFSAATN--------- 261
Query: 71 PRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFV 130
F + + H+ ++ ++ LY+ S DKT++ W + + C+ +
Sbjct: 262 -------GFEPAASLVGHQ--LAVVSLVVGAMRLYSASMDKTIRVWDLATLQ--CIQTLS 310
Query: 131 AHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSF 190
H V +++ D F+ +CS D ++K+W S +L +T ++ ALALS
Sbjct: 311 DHTGVVMSVLCW--DQFLLSCSLDQTIKVWAAT---ESGSLEVTYTHKEEH-GALALSGM 364
Query: 191 FD---NYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE----KLIFSG 243
D L +D ++ ++ S +G F+ + AI+ L F+G
Sbjct: 365 PDAQSKPVLLCSLNDNTVRLYDLPSFSD--------RGRIFSKQEIRAIQVGPSGLFFTG 416
Query: 244 SEDTTIRVWR 253
++VW+
Sbjct: 417 DGTGELKVWQ 426
>sp|Q17N69|LIS1_AEDAE Lissencephaly-1 homolog OS=Aedes aegypti GN=AAEL000770 PE=3 SV=2
Length = 409
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 136/333 (40%), Gaps = 59/333 (17%)
Query: 17 PDCVERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKKVTT----- 69
P E+ + V ++ H +M+ + ++D I+IW+F + RT K T
Sbjct: 94 PRPPEKFALAGHRATVTRVVFHPVFSMMASASEDATIKIWDFETGEYERTLKGHTDSVQD 153
Query: 70 ---------LPRRSSFLSFSKSNTQQQ---------HRDCVSCMAFYHAEGLLYTGSFDK 111
L SS LS + QQ H VS ++F A L + S DK
Sbjct: 154 LAFDSHGKLLASCSSDLSIKLWDFQQTFECVKTMHGHDHNVSSVSFVPAGDYLLSASRDK 213
Query: 112 TVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW-------RRVY 164
T+K W V CV +F H V + VN D + +CS+D SV++W +
Sbjct: 214 TIKMWEVATG--YCVKTFTGHREWVRMVRVNVDGSLMASCSNDHSVRVWQTNSKECKAEL 271
Query: 165 RENSHTLTMTLKFQQSSVNALALSSFFDNY-------FLYSGSSDGSINFWEKDKMSGGF 217
RE+ +T+ +S+ A+ ++ DN FL SGS D +I W+ + F
Sbjct: 272 REHENTVECIAWAPESAAAAINEAAGADNKKGAHQGPFLASGSRDKTIRVWDVNSGLCLF 331
Query: 218 ---NHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPV 274
H +++G F K + S S+D T+R+W C+ L H
Sbjct: 332 TLVGHDNWVRGIVFH-----PGGKYMLSASDDKTLRIWDLRN----KRCMKTLYAHSH-- 380
Query: 275 RCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
SL+M K V S S+D T KVW +
Sbjct: 381 --FCTSLDMHK--SHPYVISGSVDTTVKVWECR 409
>sp|C3XVT5|LIS1_BRAFL Lissencephaly-1 homolog OS=Branchiostoma floridae
GN=BRAFLDRAFT_59218 PE=3 SV=1
Length = 406
Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 128/334 (38%), Gaps = 64/334 (19%)
Query: 17 PDCVERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRS 74
P R + + +L H +++ + ++D I+IW++ D RT K T +
Sbjct: 94 PRPPARYSLSGHRSPITRVLFHPVYSVMVSASEDATIKIWDYETGDFERTLKGHTDAVQD 153
Query: 75 ----------------------SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKT 112
F +F T H VS + F L + S DKT
Sbjct: 154 VSFDQQGKLLASCSADMTIKLWDFQTFENIKTMHGHDHNVSSVHFMPNGDFLISASRDKT 213
Query: 113 VKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYR 165
+K W + CV +F H V + VNQD + +CS+D +V++W + R
Sbjct: 214 IKMWELATG--YCVKTFTGHREWVRTVRVNQDGSLLASCSNDQTVRVWVVANKECKAELR 271
Query: 166 ENSHTLTMTLKFQQSSVNAL------ALSSFFDNYFLYSGSSDGSINFWEKDKMSGG--- 216
E+ H + + + S N A FL SGS D +I W+ +S G
Sbjct: 272 EHEHVVE-CIAWAPESCNGHVSEVMGAEKKGRSGPFLLSGSRDKTIKMWD---ISTGVCI 327
Query: 217 ---FNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGP 273
H +++G + K I S S+D TIRVW C L+ H+
Sbjct: 328 MTLVGHDNWVRG-----VVWHPGGKYIISASDDKTIRVWDYKN----KRCQKTLEAHQH- 377
Query: 274 VRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
S++ + V + S+DQT KVW +
Sbjct: 378 ---FCTSIDFHRSAP--YVITGSVDQTVKVWECR 406
>sp|B8PD53|LIS12_POSPM Nuclear distribution protein PAC1-2 OS=Postia placenta (strain ATCC
44394 / Madison 698-R) GN=PAC1-2 PE=3 SV=1
Length = 427
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 121/299 (40%), Gaps = 51/299 (17%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHD-----NMLFTTNKDCKIRIWN 55
++ + S T +++W D F + G R + D + L T + D I++W+
Sbjct: 122 LLASASEDTTVKIW---DWETGSFERTLKGHTREVWGVDFDSKGSFLATCSSDLSIKVWD 178
Query: 56 FTVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKA 115
DN + T + H VS + F + L+ + S DKT++
Sbjct: 179 TQQWDN----------------AGYSGKTLRGHEHTVSTVKFLPGDDLIASASRDKTIRI 222
Query: 116 WRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYRENS 168
W V C+ + HE V V + D + +CSSD + ++W + +R +
Sbjct: 223 WEV--ATTFCIRTITGHEDWVRMTVPSTDGTLLGSCSSDNTARVWDPTSGVMKMEFRGHG 280
Query: 169 HTLTMTLKFQQSSVNA------LALSSFFDNYFLYSGSSDGSINFWE---KDKMSGGFNH 219
H + + +S A L ++ ++ +GS D ++ W+ ++ H
Sbjct: 281 HIVEVIAFAPLASYAAIRELAGLKAATKAPGAYIATGSRDKTVKIWDVHSGQELRTVSGH 340
Query: 220 GGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLA 278
+++G F K + S S+D TIRVW + G C+ V++ H + CLA
Sbjct: 341 NDWIRGLVFH-----PSGKHLLSASDDKTIRVWELSTG----RCMXVVEAHSHFITCLA 390
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 95/238 (39%), Gaps = 27/238 (11%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVD-SFVAHESNVNAIVVN 142
T HR ++ +AF+ LL + S D TVK W D + + H V + +
Sbjct: 103 TLTSHRAPITRVAFHPTFSLLASASEDTTVKIW---DWETGSFERTLKGHTREVWGVDFD 159
Query: 143 QDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSD 202
F+ TCSSD S+K+W +N+ TL+ + +V+ + D + S S D
Sbjct: 160 SKGSFLATCSSDLSIKVWDTQQWDNAGYSGKTLRGHEHTVSTVKFLPGDD--LIASASRD 217
Query: 203 GSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE-KLIFSGSEDTTIRVWRRAEGGCYH 261
+I WE ++ F + + + + + L+ S S D T RVW G
Sbjct: 218 KTIRIWE---VATTFCIRTITGHEDWVRMTVPSTDGTLLGSCSSDNTARVWDPTSGVMKM 274
Query: 262 ECLAVLDGHRGPVRCLA-------------ASLEMEKVVMGFLVYSSSLDQTFKVWRV 306
E GH V +A A L+ G + + S D+T K+W V
Sbjct: 275 E----FRGHGHIVEVIAFAPLASYAAIRELAGLKAATKAPGAYIATGSRDKTVKIWDV 328
>sp|Q75C26|CIAO1_ASHGO Probable cytosolic iron-sulfur protein assembly protein 1 OS=Ashbya
gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 /
NRRL Y-1056) GN=CIA1 PE=3 SV=1
Length = 328
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 100/216 (46%), Gaps = 12/216 (5%)
Query: 94 CMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSS 153
C + ++GLL TGS D+ +K V + + AH+ V ++ + S
Sbjct: 17 CWSVDISKGLLATGSADRKIKLVDVRNFKLVEELDDTAHKKAVRSVAWRPHCNVLAAGSF 76
Query: 154 DGSVKIWRRVYRENSHT--LTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKD 211
D +V IW R + S L ++ ++ V ++A S D +L + S D S+ WE D
Sbjct: 77 DTTVSIWGRDDDDYSGETELLAVIEGHENEVKSVAWS--HDGAYLATCSRDKSVWIWEAD 134
Query: 212 KMSGGFNHGGFLQGHCFAVLCLV--AIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDG 269
++S F LQ H V +V A L+ S S D T+R+W AE EC AVL G
Sbjct: 135 ELSEEFECNSVLQEHSQDVKHIVWHASRLLLASSSYDDTVRIW--AEQDDDWECAAVLSG 192
Query: 270 HRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWR 305
H G V C + E+ G + S S D T ++WR
Sbjct: 193 HGGTVWC----SDFERAETGIRLCSGSDDTTVRIWR 224
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 73/175 (41%), Gaps = 14/175 (8%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVA----HESNVNAIVVNQ 143
H+ V +A+ +L GSFD TV W D + +A HE+ V ++ +
Sbjct: 55 HKKAVRSVAWRPHCNVLAAGSFDTTVSIWGRDDDDYSGETELLAVIEGHENEVKSVAWSH 114
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
D ++ TCS D SV IW E S Q+ S + + L S S D
Sbjct: 115 DGAYLATCSRDKSVWIWE--ADELSEEFECNSVLQEHSQDVKHIVWHASRLLLASSSYDD 172
Query: 204 SINFW-EKDKMSGGFNHGGFLQGHCFAVLC----LVAIEKLIFSGSEDTTIRVWR 253
++ W E+D + L GH V C + SGS+DTT+R+WR
Sbjct: 173 TVRIWAEQDD---DWECAAVLSGHGGTVWCSDFERAETGIRLCSGSDDTTVRIWR 224
Score = 39.3 bits (90), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 104/263 (39%), Gaps = 62/263 (23%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERG------FIKARHGEVRAIL-AHDNM-LFTTNKDCKIR 52
++ GS T + +W + D G I+ EV+++ +HD L T ++D +
Sbjct: 70 VLAAGSFDTTVSIWGRDDDDYSGETELLAVIEGHENEVKSVAWSHDGAYLATCSRDKSVW 129
Query: 53 IWNF-TVSDNFR--------TKKVTTLPRRSSFLSFSKSN---------TQQQHRDC--- 91
IW +S+ F ++ V + +S L + S+ Q +C
Sbjct: 130 IWEADELSEEFECNSVLQEHSQDVKHIVWHASRLLLASSSYDDTVRIWAEQDDDWECAAV 189
Query: 92 -------VSCMAFYHAE-GL-LYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAI--- 139
V C F AE G+ L +GS D TV+ WR L D E+ + A+
Sbjct: 190 LSGHGGTVWCSDFERAETGIRLCSGSDDTTVRIWRCLTDDADVFDKEWIQETVLPAVHTR 249
Query: 140 ----VVNQDDGFVFTCSSDGSVKI--------WRRVYREN-SHTLTMTLKFQQSSVNALA 186
V DG + + SDG + + W V R + +HT+ ++ + V LA
Sbjct: 250 AVYSVSWSADGLIASVGSDGVLAVYKEVQAGRWEVVARVDCAHTV-----YEINVVKWLA 304
Query: 187 LSSFFDNYFLYSGSSDGSINFWE 209
L L +G DG +N WE
Sbjct: 305 LDG---RVLLVTGGDDGCVNVWE 324
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 104/239 (43%), Gaps = 28/239 (11%)
Query: 83 NTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVN 142
+T + H D V +AF LL +GS D TV+ W V V F H V I +
Sbjct: 495 HTLEGHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAV--FEGHTHYVLDIAFS 552
Query: 143 QDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSD 202
D V + S DG+ ++W V H + LK V A+A S D + SGS D
Sbjct: 553 PDGSMVASGSRDGTARLW-NVATGTEHAV---LKGHTDYVYAVAFSP--DGSMVASGSRD 606
Query: 203 GSINFWEKDKMSGGFNHGGFLQGHCFAVLCLV--AIEKLIFSGSEDTTIRVWRRAEGGCY 260
G+I W D +G LQ V+ L ++ GS D+T+ +W A G
Sbjct: 607 GTIRLW--DVATG--KERDVLQAPAENVVSLAFSPDGSMLVHGS-DSTVHLWDVASG--- 658
Query: 261 HECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQEKTMCLD 319
E L +GH VR +A S + G L+ S S D+T ++W V QE+ L+
Sbjct: 659 -EALHTFEGHTDWVRAVAFSPD------GALLASGSDDRTIRLWDVAA---QEEHTTLE 707
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 99/259 (38%), Gaps = 37/259 (14%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAIL--AHDNMLFTTNKDCKIRIWNFTV 58
++ +GS +R+W ER + V I +M+ + ++D R+WN
Sbjct: 515 LLASGSDDATVRLWDVAAAEERAVFEGHTHYVLDIAFSPDGSMVASGSRDGTARLWNVAT 574
Query: 59 SDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRV 118
K H D V +AF ++ +GS D T++ W V
Sbjct: 575 GTEHAVLK--------------------GHTDYVYAVAFSPDGSMVASGSRDGTIRLWDV 614
Query: 119 LDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQ 178
+ D A NV ++ + D G + SD +V +W E HT +
Sbjct: 615 ATGKER--DVLQAPAENVVSLAFSPD-GSMLVHGSDSTVHLWDVASGEALHTF----EGH 667
Query: 179 QSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAV--LCLVAI 236
V A+A S D L SGS D +I W+ ++ H L+GH V +
Sbjct: 668 TDWVRAVAFSP--DGALLASGSDDRTIRLWD---VAAQEEHT-TLEGHTEPVHSVAFHPE 721
Query: 237 EKLIFSGSEDTTIRVWRRA 255
+ S SED TIR+W A
Sbjct: 722 GTTLASASEDGTIRIWPIA 740
>sp|Q61FW2|SEL10_CAEBR F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis
briggsae GN=sel-10 PE=3 SV=1
Length = 589
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 100/222 (45%), Gaps = 26/222 (11%)
Query: 92 VSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTC 151
++CM ++ LL TGS D T+K W + D + H V ++Q ++ +
Sbjct: 261 ITCMQIHN--DLLVTGSDDNTLKVWSIDDGEVK--HTLNGHSGGVWTSQISQCGRYIVSG 316
Query: 152 SSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKD 211
S+D +VK+W R L TL+ S+V +A++ N L +GS D ++ W+
Sbjct: 317 STDRTVKVW----RAEDGFLLHTLQGHTSTVRCMAMA----NTTLVTGSRDCTLRVWD-- 366
Query: 212 KMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHR 271
+ G H LQGH AV C+ ++ SG D T+++W G +CL L GH
Sbjct: 367 -IETGL-HVRTLQGHQAAVRCVQFDGNIVVSGGYDFTVKIWDAFSG----KCLRTLIGHS 420
Query: 272 GPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQE 313
V L E +V S SLD + +VW QE
Sbjct: 421 NRVYSLLYESERS------IVCSGSLDTSIRVWDFSRPEGQE 456
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 111/272 (40%), Gaps = 34/272 (12%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSDN 61
+ +GS+ ++VWR D ++ VR + + L T ++DC +R+W+ +
Sbjct: 313 IVSGSTDRTVKVWRAEDGFLLHTLQGHTSTVRCMAMANTTLVTGSRDCTLRVWDIETGLH 372
Query: 62 FRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDK 121
R T Q H+ V C+ F ++ +G +D TVK W
Sbjct: 373 VR--------------------TLQGHQAAVRCVQF--DGNIVVSGGYDFTVKIWDAFSG 410
Query: 122 RCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSS 181
+ C+ + + H + V +++ + V + S D S+++W R L L S
Sbjct: 411 K--CLRTLIGHSNRVYSLLYESERSIVCSGSLDTSIRVW-DFSRPEGQELIAFLSGHTSL 467
Query: 182 VNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK-LI 240
+ + L L S ++D + W D G H L GH A+ L + L+
Sbjct: 468 TSGMQLRG----NILVSCNADSHVRVW--DIYEGTCIH--ILSGHRSAITSLQWFGRGLV 519
Query: 241 FSGSEDTTIRVWRRAEGGCYHECLAVLDGHRG 272
+ S+D ++++W G + +++ G G
Sbjct: 520 ATSSDDGSVKLWDIERGVLIRDLVSLNSGGNG 551
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 56/134 (41%), Gaps = 15/134 (11%)
Query: 179 QSSVNALALSSFFDNYFLYSGSSDGSINF----WEKDKMSGGFNHGGFLQGHCFAVL-CL 233
Q +N L +Y S+D S EK+ S L+GH V+ C+
Sbjct: 205 QCEINIHRLVKLLKYGPIYERSADKSRYLRGEKIEKNWHSRPIMGSAILRGHEEHVITCM 264
Query: 234 VAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVY 293
L+ +GS+D T++VW +G H L+GH G V S G +
Sbjct: 265 QIHNDLLVTGSDDNTLKVWSIDDGEVKH----TLNGHSGGVWTSQISQ------CGRYIV 314
Query: 294 SSSLDQTFKVWRVK 307
S S D+T KVWR +
Sbjct: 315 SGSTDRTVKVWRAE 328
>sp|P87053|POF1_SCHPO F-box/WD repeat-containing protein pof1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=pof1 PE=1 SV=1
Length = 605
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 114/279 (40%), Gaps = 45/279 (16%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSD 60
++ +GS IR+W + ++ V + L + + D IRIWN+
Sbjct: 285 ILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQCKLISGSMDKTIRIWNY---- 340
Query: 61 NFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLD 120
RT + ++ H D V C+ F LL +GS D TVK W
Sbjct: 341 --RTSECISI--------------LHGHTDSVLCLTF--DSTLLVSGSADCTVKLWHFSG 382
Query: 121 -KRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQ 179
KR T H VN++ + +D G V + S D ++KIW ++T T
Sbjct: 383 GKRIT----LRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSL----ETNTCLHTFSAHI 434
Query: 180 SSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKL 239
V +LAL+ + L+S S DG+I W+ +K L GH V + A
Sbjct: 435 GPVQSLALA----DSRLFSCSLDGTIKQWDIEKKKCVHT----LFGHIEGVWEIAADHLR 486
Query: 240 IFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLA 278
+ SG+ D ++VW C EC+ L H PV +A
Sbjct: 487 LISGAHDGVVKVWE----AC--ECVHTLKNHSEPVTSVA 519
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 103/233 (44%), Gaps = 39/233 (16%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
H D V C+ +L +GS+D T++ W + + + H S V + +Q
Sbjct: 272 HSDGVMCLQL--VRNILASGSYDATIRLWNLATFQQVAL--LEGHSSGVTCLQFDQCK-- 325
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ + S D +++IW YR S +++ L SV L FD+ L SGS+D ++
Sbjct: 326 LISGSMDKTIRIWN--YR-TSECISI-LHGHTDSVLCLT----FDSTLLVSGSADCTVKL 377
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK--LIFSGSEDTTIRVWRRAEGGCYHECLA 265
W SGG L+GH V + I L+ SGS+D+TI++W C H
Sbjct: 378 WH---FSGGKRI--TLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLH---- 428
Query: 266 VLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQEKTMCL 318
H GPV+ LA + ++S SLD T K W D EK C+
Sbjct: 429 TFSAHIGPVQSLA--------LADSRLFSCSLDGTIKQW------DIEKKKCV 467
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 207 FWEKDKMSGGFNHGG----FLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHE 262
+ E+ ++ + HG L GH V+CL + ++ SGS D TIR+W A +
Sbjct: 249 YAERCRVECNWRHGRCRQVVLSGHSDGVMCLQLVRNILASGSYDATIRLWNLA----TFQ 304
Query: 263 CLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
+A+L+GH V CL + K++ G S+D+T ++W +
Sbjct: 305 QVALLEGHSSGVTCL--QFDQCKLISG------SMDKTIRIWNYR 341
>sp|Q23256|YH92_CAEEL Uncharacterized WD repeat-containing protein ZC302.2
OS=Caenorhabditis elegans GN=ZC302.2 PE=4 SV=1
Length = 501
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 91/223 (40%), Gaps = 16/223 (7%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQ 143
T + H + V C +F L+ + FD+TV+ W K CV AH + +I N
Sbjct: 292 TMRGHTNYVFCCSFNPQSSLIASAGFDETVRVWDF--KTGLCVKCIPAHSDPITSISYNH 349
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
D + T S DG +++W TL T + V + S + +L S D
Sbjct: 350 DGNTMATSSYDGCIRVWDAASGSCLKTLVDT---DHAPVTFVCFSP--NGKYLLSAQLDS 404
Query: 204 SINFWEKDKMSG-GFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHE 262
S+ W+ K + +G + +C V + K I SGSED I VW +
Sbjct: 405 SLKLWDPKKAKPLKYYNGHKNKKYCLFANMSVPLGKHIISGSEDGRILVWSIQT----KQ 460
Query: 263 CLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWR 305
+ +L+GH PV + + + G L D ++WR
Sbjct: 461 IVQILEGHTTPVLATDSHPTLNIIASGGL----EPDNVIRIWR 499
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 100/263 (38%), Gaps = 51/263 (19%)
Query: 79 FSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNA 138
FS T H VS + F + L TGS DK +K W +D T + + +H+ +N
Sbjct: 203 FSLVKTISGHTKSVSVIKFSYCGKYLGTGSADKQIKVWNTVD--MTYLQTLASHQLGIND 260
Query: 139 IVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSF-FDNYFLY 197
+ + F+ + S D +VKI+ + L+ + N + SF + +
Sbjct: 261 FSWSSNSQFIASASDDTTVKIFDVISG-------ACLRTMRGHTNYVFCCSFNPQSSLIA 313
Query: 198 SGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFS------------GSE 245
S D ++ W+ F G C V C+ A I S S
Sbjct: 314 SAGFDETVRVWD------------FKTGLC--VKCIPAHSDPITSISYNHDGNTMATSSY 359
Query: 246 DTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWR 305
D IRVW A G C ++D PV + S G + S+ LD + K+W
Sbjct: 360 DGCIRVWDAASGSCLK---TLVDTDHAPVTFVCFSPN------GKYLLSAQLDSSLKLW- 409
Query: 306 VKVMPDQEKTMCLDYSDYHSNSK 328
D +K L Y + H N K
Sbjct: 410 -----DPKKAKPLKYYNGHKNKK 427
>sp|C4Q0P6|LIS1_SCHMA Lissencephaly-1 homolog OS=Schistosoma mansoni GN=Smp_129340 PE=3
SV=1
Length = 417
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 125/300 (41%), Gaps = 49/300 (16%)
Query: 37 AHDNMLFTTNKDCKIRIWNFTVSDNFRTKKVTT-------LPRRSSFLSFSKSNTQQQ-- 87
H N+ + ++D I++W++ + T K T FL+ ++ Q +
Sbjct: 132 PHYNVFVSASEDASIKVWDYETGEFEHTLKGHTDSVQDVAFDPSGKFLASCSADMQVKLW 191
Query: 88 -------------HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHES 134
H VS +AF + L + S DKT+K W V CT +F+ H
Sbjct: 192 DFTIYQCIKTLTGHDHNVSSVAFLPSGDFLVSASRDKTIKMWEVSTGYCT--KTFIGHTE 249
Query: 135 NVNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYRENSHTLT-MTLKFQQSSVNALA 186
+ ++ + + + +CS+D +++IW + V R + H + + ++N+L
Sbjct: 250 WIRSVRPSPEGNLLASCSNDHTIRIWSVESRECQVVLRGHEHVVECIAWASHPQNLNSLP 309
Query: 187 LSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLV--AIEKLIFSGS 244
SS + L SGS D +I FW+ + F L GH V LV +L+ S S
Sbjct: 310 -SSMNSSLLLVSGSRDRTIRFWDVNIGICLF----VLIGHDNWVRQLVFHPHGRLLLSAS 364
Query: 245 EDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
+D TIRVW C+ L+ H V L + + G S+DQT +W
Sbjct: 365 DDKTIRVWDLKNRRCH----KTLNAHSHFVTSLDVNRLAPYAITG------SVDQTIHIW 414
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 109/260 (41%), Gaps = 31/260 (11%)
Query: 58 VSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWR 117
+SD + V +PR + + + HR ++ + F+ + + S D ++K W
Sbjct: 97 LSDRSDRRDVDAIPRPPAKFTLTG------HRSPITRVLFHPHYNVFVSASEDASIKVWD 150
Query: 118 VLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKF 177
+ + H +V + + F+ +CS+D VK+W + TLT
Sbjct: 151 Y--ETGEFEHTLKGHTDSVQDVAFDPSGKFLASCSADMQVKLWDFTIYQCIKTLTG---- 204
Query: 178 QQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE 237
+V+++A D FL S S D +I WE +S G+ F+ GH + +
Sbjct: 205 HDHNVSSVAFLPSGD--FLVSASRDKTIKMWE---VSTGYCTKTFI-GHTEWIRSVRPSP 258
Query: 238 K--LIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKV-------VM 288
+ L+ S S D TIR+W EC VL GH V C+A + + +
Sbjct: 259 EGNLLASCSNDHTIRIWSVES----RECQVVLRGHEHVVECIAWASHPQNLNSLPSSMNS 314
Query: 289 GFLVYSSSLDQTFKVWRVKV 308
L+ S S D+T + W V +
Sbjct: 315 SLLLVSGSRDRTIRFWDVNI 334
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 87/223 (39%), Gaps = 35/223 (15%)
Query: 128 SFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALAL 187
+ H S + ++ + + S D S+K+W E H TLK SV +A
Sbjct: 117 TLTGHRSPITRVLFHPHYNVFVSASEDASIKVWDYETGEFEH----TLKGHTDSVQDVAF 172
Query: 188 SSFFDNYFLYSGSSDGSINFWEKD-----KMSGGFNHGGFLQGHCFAVLCLVAIEKLIFS 242
FL S S+D + W+ K G +H + + + + S
Sbjct: 173 DP--SGKFLASCSADMQVKLWDFTIYQCIKTLTGHDHN-------VSSVAFLPSGDFLVS 223
Query: 243 GSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFK 302
S D TI++W + G C + GH +R + S E G L+ S S D T +
Sbjct: 224 ASRDKTIKMWEVSTGYCTKTFI----GHTEWIRSVRPSPE------GNLLASCSNDHTIR 273
Query: 303 VWRVK------VMPDQEKTM-CLDYSDYHSNSKTTTTKMDYEM 338
+W V+ V+ E + C+ ++ + N + + M+ +
Sbjct: 274 IWSVESRECQVVLRGHEHVVECIAWASHPQNLNSLPSSMNSSL 316
>sp|B8P4B0|LIS11_POSPM Nuclear distribution protein PAC1-1 OS=Postia placenta (strain ATCC
44394 / Madison 698-R) GN=PAC1-1 PE=3 SV=1
Length = 438
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 120/298 (40%), Gaps = 49/298 (16%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHD-----NMLFTTNKDCKIRIWN 55
++ + S T +++W D F + G R + D + L T + D I++W+
Sbjct: 122 LLASASEDTTVKIW---DWETGSFERTLKGHTREVWGVDFDSKGSFLATCSSDLSIKVWD 178
Query: 56 FTVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKA 115
DN + T + H VS + F + L+ + S DKT++
Sbjct: 179 TQQWDN----------------AGYSGKTLRGHEHTVSTVKFLPGDDLIASASRDKTIRI 222
Query: 116 WRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYRENS 168
W V C+ HE V V + D + +CSSD + ++W + +R +
Sbjct: 223 WEV--ATTFCIRMITGHEDWVRMTVPSTDGTLLGSCSSDNTARVWDPTSGVMKMEFRGHG 280
Query: 169 HTLTMTLKFQQSSVNA------LALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGF 222
H + + +S A L ++ ++ +GS D ++ W D SG
Sbjct: 281 HIVEVIAFAPLASYAAIRELAGLKAATKAPGAYIATGSRDKTVKIW--DVHSG--QELRT 336
Query: 223 LQGHCFAVLCLV--AIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLA 278
L GH + LV K + S S+D TIRVW + G C+ V++ H + CLA
Sbjct: 337 LSGHNDWIRGLVFHPSGKHLLSASDDKTIRVWELSTG----RCMKVVEAHSHFITCLA 390
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 95/239 (39%), Gaps = 29/239 (12%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVD-SFVAHESNVNAIVVN 142
T HR ++ +AF+ LL + S D TVK W D + + H V + +
Sbjct: 103 TLTSHRAPITRVAFHPTFSLLASASEDTTVKIW---DWETGSFERTLKGHTREVWGVDFD 159
Query: 143 QDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSD 202
F+ TCSSD S+K+W +N+ TL+ + +V+ + D + S S D
Sbjct: 160 SKGSFLATCSSDLSIKVWDTQQWDNAGYSGKTLRGHEHTVSTVKFLPGDD--LIASASRD 217
Query: 203 GSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK--LIFSGSEDTTIRVWRRAEGGCY 260
+I WE ++ F + GH V V L+ S S D T RVW G
Sbjct: 218 KTIRIWE---VATTFCI-RMITGHEDWVRMTVPSTDGTLLGSCSSDNTARVWDPTSGVMK 273
Query: 261 HECLAVLDGHRGPVRCLA-------------ASLEMEKVVMGFLVYSSSLDQTFKVWRV 306
E GH V +A A L+ G + + S D+T K+W V
Sbjct: 274 ME----FRGHGHIVEVIAFAPLASYAAIRELAGLKAATKAPGAYIATGSRDKTVKIWDV 328
>sp|B5X3C4|LIS1B_SALSA Lissencephaly-1 homolog B OS=Salmo salar GN=pafah1b1-2 PE=2 SV=1
Length = 410
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 130/336 (38%), Gaps = 66/336 (19%)
Query: 17 PDCVERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRS 74
P ER + V ++ H +++ T+++D I++W++ D RT K T +
Sbjct: 96 PRPPERYALSGHRSPVTRVIFHPVFSVMVTSSEDATIKVWDYEAGDFERTLKGHTDSVQD 155
Query: 75 ----------------------SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKT 112
F F T H VS +A + + S DKT
Sbjct: 156 ISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 113 VKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYR 165
+K W V CV +F H V + NQD + +CS+D +V++W + R
Sbjct: 216 IKMWEVATG--YCVKTFTGHREWVRMVRPNQDGSLIASCSNDQTVRVWVATSKECKAELR 273
Query: 166 ENSHTLTMTLKFQQSSVNALALSSFFDN--------YFLYSGSSDGSINFWEKDKMSGGF 217
E+ H + + + + + L + FL SGS D +I W+ +S G
Sbjct: 274 EHEHVVE-CIAWAPDTAHPTILEATSSESKKNGKSGPFLLSGSRDKTIKMWD---ISTGM 329
Query: 218 ------NHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHR 271
H +++G + + + I S ++D T+R+W C+ L H
Sbjct: 330 CLMTLVGHDNWVRG-----VLVHPGGRFIVSCADDKTLRIWDYKN----KRCMKTLCAHE 380
Query: 272 GPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
SL+M + V + S+DQT KVW +
Sbjct: 381 H----FVTSLDMHQT--APYVVTGSVDQTVKVWECR 410
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 101/248 (40%), Gaps = 40/248 (16%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVD-SFVAHESNVNAIVVNQDDG 146
HR V+ + F+ ++ T S D T+K W D + + H +V I +Q
Sbjct: 107 HRSPVTRVIFHPVFSVMVTSSEDATIKVW---DYEAGDFERTLKGHTDSVQDISFDQTGK 163
Query: 147 FVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
+ +CS+D ++K+W T+ +V+++A+ D+ + S S D +I
Sbjct: 164 LLASCSADMTIKLWDF----QGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIK 217
Query: 207 FWEKDKMSGGFNHGGFLQGHCFAVLCLVAIE--KLIFSGSEDTTIRVWRRAEGGCYHECL 264
WE ++ G+ F GH V + + LI S S D T+RVW EC
Sbjct: 218 MWE---VATGYCVKTF-TGHREWVRMVRPNQDGSLIASCSNDQTVRVWV----ATSKECK 269
Query: 265 AVLDGHRGPVRCLAASLEMEKVVM--------------GFLVYSSSLDQTFKVWRVKVMP 310
A L H V C+A + + + G + S S D+T K+W
Sbjct: 270 AELREHEHVVECIAWAPDTAHPTILEATSSESKKNGKSGPFLLSGSRDKTIKMW------ 323
Query: 311 DQEKTMCL 318
D MCL
Sbjct: 324 DISTGMCL 331
>sp|Q93794|SEL10_CAEEL F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis elegans
GN=sel-10 PE=1 SV=3
Length = 587
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 103/233 (44%), Gaps = 39/233 (16%)
Query: 88 HRD-CVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVD------SFVAHESNVNAIV 140
H D ++CM + + +L TGS D T+K W C+D + V H V
Sbjct: 254 HEDHVITCMQIH--DDVLVTGSDDNTLKVW--------CIDKGEVMYTLVGHTGGVWTSQ 303
Query: 141 VNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGS 200
++Q ++ + S+D +VK+W V +L TL+ S+V +A++ L +GS
Sbjct: 304 ISQCGRYIVSGSTDRTVKVWSTV----DGSLLHTLQGHTSTVRCMAMAG----SILVTGS 355
Query: 201 SDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCY 260
D ++ W D SG H L GH AV C+ + SG D T+++W G
Sbjct: 356 RDTTLRVW--DVESG--RHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTG--- 408
Query: 261 HECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQE 313
C+ L GH V L E E+ + V S SLD + +VW QE
Sbjct: 409 -RCIRTLTGHNNRVYSLL--FESERSI----VCSGSLDTSIRVWDFTRPEGQE 454
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 106/272 (38%), Gaps = 34/272 (12%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSDN 61
+ +GS+ ++VW D ++ VR + ++L T ++D +R+W+ +
Sbjct: 311 IVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWDVESGRH 370
Query: 62 FRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDK 121
T H V C+ F + +G +D TVK W
Sbjct: 371 LA--------------------TLHGHHAAVRCVQFDGTT--VVSGGYDFTVKIWNAHTG 408
Query: 122 RCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSS 181
R C+ + H + V +++ + V + S D S+++W E + + L+ S
Sbjct: 409 R--CIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVAL-LQGHTSL 465
Query: 182 VNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK-LI 240
+ + L L S ++D + W D G H L GH A+ L + ++
Sbjct: 466 TSGMQLRG----NILVSCNADSHVRVW--DIHEGTCVH--MLSGHRSAITSLQWFGRNMV 517
Query: 241 FSGSEDTTIRVWRRAEGGCYHECLAVLDGHRG 272
+ S+D T+++W G + + + G G
Sbjct: 518 ATSSDDGTVKLWDIERGALIRDLVTLDSGGNG 549
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/213 (18%), Positives = 80/213 (37%), Gaps = 30/213 (14%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSD 60
++ TGS T +RVW + H VR + + + D ++IWN
Sbjct: 350 ILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGR 409
Query: 61 NFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLD 120
RT H + V + F ++ +GS D +++ W
Sbjct: 410 CIRTLT--------------------GHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTR 449
Query: 121 KRCT-CVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQ 179
CV H S + + + + + +C++D V++W + T L +
Sbjct: 450 PEGQECVALLQGHTSLTSGMQLRGN--ILVSCNADSHVRVWDI----HEGTCVHMLSGHR 503
Query: 180 SSVNALALSSFFDNYFLYSGSSDGSINFWEKDK 212
S++ +L +F + + S DG++ W+ ++
Sbjct: 504 SAITSL---QWFGRNMVATSSDDGTVKLWDIER 533
>sp|Q05583|CIAO1_YEAST Cytosolic iron-sulfur protein assembly protein 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=CIA1 PE=1
SV=1
Length = 330
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 104/225 (46%), Gaps = 17/225 (7%)
Query: 96 AFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSF--VAHESNVNAIVVNQDDGFVFTCSS 153
+F ++G+L TGS D+ +K V T +D AH+ + ++ + S
Sbjct: 19 SFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSF 78
Query: 154 DGSVKIWRR---VYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEK 210
D +V IW + R L ++ ++ V +A S+ D Y+L + S D S+ WE
Sbjct: 79 DSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSN--DGYYLATCSRDKSVWIWET 136
Query: 211 DKMSGGFNHGGFLQGHCFAVLCLV--AIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLD 268
D+ + LQ H V ++ E L+ S S D T+R+W+ + EC+AVL+
Sbjct: 137 DESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDW--ECVAVLN 194
Query: 269 GHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQE 313
GH G V S + +K F + S S D T +VW K M D E
Sbjct: 195 GHEGTVW----SSDFDKTEGVFRLCSGSDDSTVRVW--KYMGDDE 233
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 72/172 (41%), Gaps = 27/172 (15%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGF-------IKARHGEVRAILAHDN--MLFTTNKDCKI 51
++ GS + + +W + + +R F I+ EV+ + ++ L T ++D +
Sbjct: 72 LLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSV 131
Query: 52 RIWNFTVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDK 111
IW S + + Q+H V + ++ +E LL + S+D
Sbjct: 132 WIWETDESGE----------------EYECISVLQEHSQDVKHVIWHPSEALLASSSYDD 175
Query: 112 TVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSS--DGSVKIWR 161
TV+ W+ D CV HE V + ++ +G CS D +V++W+
Sbjct: 176 TVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWK 227
>sp|Q4RJN5|LIS1_TETNG Lissencephaly-1 homolog OS=Tetraodon nigroviridis GN=pafah1b1 PE=3
SV=1
Length = 410
Score = 71.6 bits (174), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 128/336 (38%), Gaps = 66/336 (19%)
Query: 17 PDCVERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRS 74
P ER + V ++ H +++ + ++D I++W++ D RT K T +
Sbjct: 96 PRPPERYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQD 155
Query: 75 ----------------------SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKT 112
F SF T H VS +A + + S DKT
Sbjct: 156 ISFDLTGKLLASCSADMTIKLWDFQSFECIRTMHGHDHNVSSVAIMPNGDHIISASRDKT 215
Query: 113 VKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYR 165
+K W V CV +F H V + NQD + +CS+D +V++W + R
Sbjct: 216 MKMWEVATG--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVASKECKAELR 273
Query: 166 ENSHTLTMTLKFQQSSVNALAL--------SSFFDNYFLYSGSSDGSINFWEKDKMSGGF 217
E+ H + + + S + L S FL SGS D +I W+ +S G
Sbjct: 274 EHEHVVE-CISWAPESAHPTILDATSSESKKSGKPGPFLLSGSRDKTIKMWD---VSTGM 329
Query: 218 ------NHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHR 271
H +++G F K I + ++D T+R+W C+ L H
Sbjct: 330 CLMTLVGHDNWVRGVLFH-----PGGKFIVTCADDKTLRIWDYKN----KRCMKTLCAHE 380
Query: 272 GPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
SL+ K V + S+DQT KVW +
Sbjct: 381 H----FVTSLDFHKA--APYVVTGSVDQTVKVWECR 410
>sp|Q803D2|LIS1B_DANRE Lissencephaly-1 homolog B OS=Danio rerio GN=pafah1b1b PE=2 SV=3
Length = 410
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 130/335 (38%), Gaps = 64/335 (19%)
Query: 17 PDCVERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRS 74
P E+ + V ++ H +++ + ++D I++W++ D RT K T +
Sbjct: 96 PRPPEKYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQD 155
Query: 75 ----------------------SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKT 112
F F T H VS +A + + S DKT
Sbjct: 156 ISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 113 VKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYR 165
+K W V CV +F H V + NQD + +CS+D +V++W + R
Sbjct: 216 MKMWEVATG--YCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELR 273
Query: 166 ENSHTLTMTLKFQQSSVNALALSSFFDNY-------FLYSGSSDGSINFWEKDKMSGGF- 217
E+ H + +S+ ++ ++ +N FL SGS D +I W+ +S G
Sbjct: 274 EHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWD---ISTGMC 330
Query: 218 -----NHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRG 272
H +++G F + + S ++D T+R+W C+ L H
Sbjct: 331 LMTLVGHDNWVRGVLFH-----PGGRFVVSCADDKTLRIWDYKN----KRCMKTLSAHEH 381
Query: 273 PVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
SL+ K V + S+DQT KVW +
Sbjct: 382 ----FVTSLDFHKA--SPYVVTGSVDQTVKVWECR 410
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 101/247 (40%), Gaps = 38/247 (15%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
HR V+ + F+ L+ + S D T+K W + + H +V I +Q
Sbjct: 107 HRSPVTRVIFHPVFSLMVSASEDATIKVWDY--EAGDFERTLKGHTDSVQDISFDQTGKL 164
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ +CS+D ++K+W T+ +V+++A+ D+ + S S D ++
Sbjct: 165 LASCSADMTIKLWDF----QGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTMKM 218
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK--LIFSGSEDTTIRVWRRAEGGCYHECLA 265
WE ++ G+ F GH V + + L+ S S D T+RVW A EC A
Sbjct: 219 WE---VATGYCVKTF-TGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVA----TKECKA 270
Query: 266 VLDGHRGPVRCLAASLEMEKVVM--------------GFLVYSSSLDQTFKVWRVKVMPD 311
L H V C++ + E + G + S S D+T K+W D
Sbjct: 271 ELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMW------D 324
Query: 312 QEKTMCL 318
MCL
Sbjct: 325 ISTGMCL 331
>sp|O62621|COPB2_DROME Coatomer subunit beta' OS=Drosophila melanogaster GN=beta'Cop PE=2
SV=2
Length = 914
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 32/220 (14%)
Query: 36 LAHDNMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCM 95
+A N + T + D +IR++N+ TL + SF + H D + C+
Sbjct: 66 VARKNWILTGSDDMQIRVFNYN-----------TLEKVHSF---------EAHSDYLRCI 105
Query: 96 AFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSS-D 154
A + + L+ T S D +K W +K C F H V IV N D F +S D
Sbjct: 106 AVHPTQPLVLTSSDDMLIKLWN-WEKMWACQRVFEGHTHYVMQIVFNPKDNNTFASASLD 164
Query: 155 GSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMS 214
+VK+W+ S+ TL+ + VN + D +L SG+ D + W+ +
Sbjct: 165 RTVKVWQL----GSNFANFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKT 220
Query: 215 GGFNHGGFLQGHC--FAVLCLVAIEKLIFSGSEDTTIRVW 252
L+GH + +C ++ +GSED T+R+W
Sbjct: 221 CVQT----LEGHAQNISAVCFHPELPIVLTGSEDGTVRIW 256
Score = 61.6 bits (148), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 84/193 (43%), Gaps = 42/193 (21%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDN--MLFTTNKDCKIRIWN---- 55
+ TGS +IRV+ + +A +R I H ++ T++ D I++WN
Sbjct: 72 ILTGSDDMQIRVFNYNTLEKVHSFEAHSDYLRCIAVHPTQPLVLTSSDDMLIKLWNWEKM 131
Query: 56 ------------------FTVSDNF--------RTKKVTTLPRRSSFLSFSKSNTQQQHR 89
F DN RT KV L S+F +F T + H
Sbjct: 132 WACQRVFEGHTHYVMQIVFNPKDNNTFASASLDRTVKVWQL--GSNFANF----TLEGHE 185
Query: 90 DCVSCMAFYHA--EGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
V+C+ +YH + L +G+ D+ VK W +K TCV + H N++A+ + +
Sbjct: 186 KGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNK--TCVQTLEGHAQNISAVCFHPELPI 243
Query: 148 VFTCSSDGSVKIW 160
V T S DG+V+IW
Sbjct: 244 VLTGSEDGTVRIW 256
>sp|B5X3Z6|LIS1A_SALSA Lissencephaly-1 homolog A OS=Salmo salar GN=pafah1b1-1 PE=2 SV=1
Length = 410
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 127/336 (37%), Gaps = 66/336 (19%)
Query: 17 PDCVERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPRRS 74
P E+ + V ++ H +++ + ++D I++W++ D RT K T +
Sbjct: 96 PRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQD 155
Query: 75 ----------------------SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKT 112
F F T H VS +A + + S DKT
Sbjct: 156 ISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT 215
Query: 113 VKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW-------RRVYR 165
+K W V CV +F H V + NQD + +CS+D +V++W + R
Sbjct: 216 IKMWEVATG--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVASKECKAELR 273
Query: 166 ENSHTLTMTLKFQQSSVNALALS--------SFFDNYFLYSGSSDGSINFWEKDKMSGGF 217
E+ H + + + S + L S FL SGS D +I W+ +S G
Sbjct: 274 EHEHVVE-CISWAPESAHPTILEATGSESKKSGKPGPFLLSGSRDKTIKMWD---VSIGM 329
Query: 218 ------NHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHR 271
H +++G + + K I S ++D T+R+W C+ L H
Sbjct: 330 CLMTLVGHDNWVRG-----MLVHPGGKFILSCADDKTLRIWDYKN----KRCMKTLGAHE 380
Query: 272 GPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
V L VV G S+DQT KVW +
Sbjct: 381 HFVTSLDFHKNAPYVVTG------SVDQTVKVWECR 410
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 101/247 (40%), Gaps = 38/247 (15%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
HR V+ + F+ ++ + S D T+K W + + H +V I +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDY--ETGDFERTLKGHTDSVQDISFDHTGKL 164
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ +CS+D ++K+W T+ +V+++A+ D+ + S S D +I
Sbjct: 165 LASCSADMTIKLWDF----QGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKM 218
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIEK--LIFSGSEDTTIRVWRRAEGGCYHECLA 265
WE ++ G+ F GH V + + LI S S D T+RVW A EC A
Sbjct: 219 WE---VATGYCVKTF-TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAS----KECKA 270
Query: 266 VLDGHRGPVRCLAASLEMEKVVM--------------GFLVYSSSLDQTFKVWRVKVMPD 311
L H V C++ + E + G + S S D+T K+W V +
Sbjct: 271 ELREHEHVVECISWAPESAHPTILEATGSESKKSGKPGPFLLSGSRDKTIKMWDVSI--- 327
Query: 312 QEKTMCL 318
MCL
Sbjct: 328 ---GMCL 331
>sp|D3BUN1|LIS1_POLPA Lissencephaly-1 homolog OS=Polysphondylium pallidum PE=3 SV=1
Length = 417
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 132/345 (38%), Gaps = 74/345 (21%)
Query: 15 RQPDCVERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKKVTTLPR 72
RQP E+ + + A+ H +++ + ++D +RIW+F D RT K T
Sbjct: 93 RQP---EKHVLTGHRNCINAVRFHPLFSVIVSASEDATMRIWDFDSGDFERTLKGHTNAV 149
Query: 73 RS----------------------SFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFD 110
+ F SF T H VSC+ F + L + S D
Sbjct: 150 QDIDFDKSGNLLASCSADLTIKLWDFQSFDCIKTLHGHDHNVSCVRFLPSGDQLVSSSRD 209
Query: 111 KTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRV------- 163
K++K W CT + HE V ++V++D + +CS+D + ++W
Sbjct: 210 KSIKVWETATGYCT--KTLTGHEDWVRKVIVSEDGTTLASCSNDQTARVWNLAKGECLLT 267
Query: 164 YRENSH-----------------TLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSIN 206
+RE+SH +L T + + + +SF +L +GS D +I
Sbjct: 268 FREHSHVVECLAYSPANIVEVPGSLLSTPEGKAKAKAGAGGTSFGQAGYLATGSRDKTIK 327
Query: 207 FWEKDKMSGGFNHGGFLQ---GHCFAVLCLV--AIEKLIFSGSEDTTIRVWRRAEGGCYH 261
WE G LQ GH V + K + S +D +IRVW A+G C
Sbjct: 328 IWE-------LATGRCLQTYIGHDNWVRSIKFHPCGKYLISVGDDKSIRVWDIAQGRCIK 380
Query: 262 ECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRV 306
+ + H + CL + G +D K+W++
Sbjct: 381 ---TINEAHSHFISCLDFCSHNPHIATG------GVDDIIKIWKL 416
>sp|Q86TI4|WDR86_HUMAN WD repeat-containing protein 86 OS=Homo sapiens GN=WDR86 PE=2 SV=3
Length = 376
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 107/267 (40%), Gaps = 70/267 (26%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
HR ++ ++ L TGS D T + W D +C + HES V +D
Sbjct: 14 HRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGQCCAL--LQGHESYVT--FCQLEDEA 69
Query: 148 VFTCSSDGSVKIWR-------RVYRENSHTLTMTL------------------------- 175
FTCS+D +++ W +VYR ++ + L
Sbjct: 70 AFTCSADCTIRRWDVLTGQCLQVYRGHTSIVNRILVANNQLFSSSYDRTARVWSVDKGQM 129
Query: 176 ----KFQQSSVNALALSSFFD------------NYFLYSGSSDGSINFWEKDKMSGGFNH 219
+ ++ V LA S+ +D L +GS+DG+ W+ ++ G H
Sbjct: 130 SREFRGHRNCVLTLAYSAPWDLPSTPCAEEAAAGGLLVTGSTDGTAKVWQ---VASGCCH 186
Query: 220 GGFLQGHCFAVLCLV--AIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCL 277
L+GH AVLCLV F+GS D TIR W G E L V HRG V CL
Sbjct: 187 -QTLRGHTGAVLCLVLDTPGHTAFTGSTDATIRAWDILSG----EQLRVFREHRGSVICL 241
Query: 278 AASLEMEKVVMGFLVYSSSLDQTFKVW 304
++ LVYS S D+T K W
Sbjct: 242 E--------LVNRLVYSGSADRTVKCW 260
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 132/354 (37%), Gaps = 84/354 (23%)
Query: 2 VFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAILAHDNMLFTTNKDCKIRIWNFTVSDN 61
+ TGS R+W D ++ V D FT + DC IR W+
Sbjct: 30 LLTGSEDGTARLWSTADGQCCALLQGHESYVTFCQLEDEAAFTCSADCTIRRWDVLTGQ- 88
Query: 62 FRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDK 121
L + +T +R V A L++ S+D+T + W V
Sbjct: 89 --------------CLQVYRGHTSIVNRILV-------ANNQLFSSSYDRTARVWSVDKG 127
Query: 122 RCTCVDSFVAHESNVNAIVVNQD--------------DGFVFTCSSDGSVKIWRRVYREN 167
+ + F H + V + + G + T S+DG+ K+W+
Sbjct: 128 QMS--REFRGHRNCVLTLAYSAPWDLPSTPCAEEAAAGGLLVTGSTDGTAKVWQVA---- 181
Query: 168 SHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHC 227
S TL+ +V L L + + ++GS+D +I W D +SG + H
Sbjct: 182 SGCCHQTLRGHTGAVLCLVLDT--PGHTAFTGSTDATIRAW--DILSG--EQLRVFREHR 235
Query: 228 FAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCL---------- 277
+V+CL + +L++SGS D T++ W G EC+ HR V L
Sbjct: 236 GSVICLELVNRLVYSGSADRTVKCWLADTG----ECVRTFTAHRRNVSALKYHAGTLFTG 291
Query: 278 ----------AASLEMEKV------------VMGFLVYSSSLDQTFKVWRVKVM 309
A S E+ +V V G ++Y++S D ++W V+ +
Sbjct: 292 SGDACARAFDAQSGELRRVFRGHTFIINCIQVHGQVLYTASHDGALRLWDVRGL 345
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 87/217 (40%), Gaps = 36/217 (16%)
Query: 1 MVFTGSSSTRIRVWRQPDCVERGFIKARHGEVRAIL--AHDNMLFTTNKDCKIRIWNFTV 58
++ TGS+ +VW+ ++ G V ++ + FT + D IR W+
Sbjct: 165 LLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSTDATIRAWDILS 224
Query: 59 SDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRV 118
+ R + +HR V C+ + L+Y+GS D+TVK W
Sbjct: 225 GEQLRVFR--------------------EHRGSVICLELVNR--LVYSGSADRTVKCW-- 260
Query: 119 LDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQ 178
L CV +F AH NV+A+ + G +FT S D R + S L +
Sbjct: 261 LADTGECVRTFTAHRRNVSALKYHA--GTLFTGSGDACA----RAFDAQSGELRRVFRGH 314
Query: 179 QSSVNALALSSFFDNYFLYSGSSDGSINFWEKDKMSG 215
+N + + LY+ S DG++ W+ + G
Sbjct: 315 TFIINCIQV----HGQVLYTASHDGALRLWDVRGLRG 347
>sp|A8X8C6|TG125_CAEBR WD repeat-containing protein tag-125 OS=Caenorhabditis briggsae
GN=tag-125 PE=4 SV=1
Length = 368
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 105/258 (40%), Gaps = 39/258 (15%)
Query: 57 TVSDNFRTKKVTTLPRRSSFLSFSKSNTQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAW 116
T SD+ +T K+ +P + + T + H + V C F L+ +GSFD++V+ W
Sbjct: 138 TASDD-KTLKIYEVP------TVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIW 190
Query: 117 RVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLK 176
V + CV + AH V+A+ N+D + + S DG V+IW + TL
Sbjct: 191 DV--RTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLV---- 244
Query: 177 FQQSSVNALALSSFFDN-YFLYSGSSDGSINFWEKDKMSGGFNHGGFL---QGHCFAVLC 232
+A F N ++ S + D ++ W+ F G L QGH C
Sbjct: 245 --DDENPPVAFVKFSPNGKYILSSNLDNTLKLWD-------FGKGKTLKQYQGHENNKYC 295
Query: 233 L-----VAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVV 287
+ V K I SGSED I VW E + L+GH V +
Sbjct: 296 IFANFSVTGGKWIISGSEDCKIYVWNLQT----KEVVQSLEGHTQAVIASDCHPMQNMIA 351
Query: 288 MGFLVYSSSLDQTFKVWR 305
G L D T ++WR
Sbjct: 352 SGAL----EPDNTIRIWR 365
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 89/221 (40%), Gaps = 19/221 (8%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQ 143
T + H +S + F L T S DKTVK W + D +C + H+ VN +
Sbjct: 74 TIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSD--LSCERTLTGHKLGVNDFAWSA 131
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
D + T S D ++KI Y + + TLK + V + + + SGS D
Sbjct: 132 DSKSIVTASDDKTLKI----YEVPTVKMAKTLKGHTNYVFCCNFNP--QSSLVVSGSFDE 185
Query: 204 SINFWEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHEC 263
S+ W D +G + + LI SGS D +R+W A G C
Sbjct: 186 SVRIW--DVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVK-- 241
Query: 264 LAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVW 304
++D PV + S G + SS+LD T K+W
Sbjct: 242 -TLVDDENPPVAFVKFSPN------GKYILSSNLDNTLKLW 275
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 28/196 (14%)
Query: 126 VDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNAL 185
+ + H +++A+ + F+ T S+D +VKIW TLT + VN
Sbjct: 72 ISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTG----HKLGVNDF 127
Query: 186 ALSSFFDNYFLYSGSSDGSINFWEKDKMSGGFNHGGFLQGHCFAVLC--LVAIEKLIFSG 243
A S+ D+ + + S D ++ +E + L+GH V C L+ SG
Sbjct: 128 AWSA--DSKSIVTASDDKTLKIYEVPTV----KMAKTLKGHTNYVFCCNFNPQSSLVVSG 181
Query: 244 SEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKV 303
S D ++R+W G C+ L H PV ++ + + G L+ S S D ++
Sbjct: 182 SFDESVRIWDVRTG----MCVKTLPAHSDPVSAVSFNRD------GSLITSGSYDGLVRI 231
Query: 304 WR------VKVMPDQE 313
W VK + D E
Sbjct: 232 WDTANGQCVKTLVDDE 247
>sp|Q17963|TG125_CAEEL WD repeat-containing protein tag-125 OS=Caenorhabditis elegans
GN=tag-125 PE=4 SV=1
Length = 376
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 96/233 (41%), Gaps = 30/233 (12%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQ 143
T + H + V C F L+ +GSFD++V+ W V K C+ + AH V+A+ N+
Sbjct: 166 TLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDV--KTGMCIKTLPAHSDPVSAVSFNR 223
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
D + + S DG V+IW N + + + V + S + ++ + + D
Sbjct: 224 DGSLIASGSYDGLVRIWDTA---NGQCIKTLVDDENPPVAFVKFSP--NGKYILASNLDS 278
Query: 204 SINFWEKDKMSGGFNHGGFLQ---GHCFAVLCL-----VAIEKLIFSGSEDTTIRVWRRA 255
++ W+ F+ G L+ GH + C+ V K I SGSED I +W
Sbjct: 279 TLKLWD-------FSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQ 331
Query: 256 EGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKV 308
E + L+GH PV + G L D +WR V
Sbjct: 332 T----REIVQCLEGHTQPVLASDCHPVQNIIASGAL----EPDNKIHIWRSDV 376
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 97/255 (38%), Gaps = 45/255 (17%)
Query: 84 TQQQHRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQ 143
T + H +S F L T S DKTVK W + C + H+ VN I +
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNM--DHMICERTLTGHKLGVNDIAWSS 139
Query: 144 DDGFVFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDG 203
D V + S D ++KI+ V +T TLK + V + + + SGS D
Sbjct: 140 DSRCVVSASDDKTLKIFEIVTSR----MTKTLKGHNNYVFCCNFNP--QSSLVVSGSFDE 193
Query: 204 SINFWEKDKMSGGFNHGGFLQGHCFAVL-----CLVAIE-----KLIFSGSEDTTIRVWR 253
S+ W+ G C L + A+ LI SGS D +R+W
Sbjct: 194 SVRIWD------------VKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWD 241
Query: 254 RAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVKVMPDQE 313
A G C ++D PV + S G + +S+LD T K+W D
Sbjct: 242 TANGQCIK---TLVDDENPPVAFVKFSPN------GKYILASNLDSTLKLW------DFS 286
Query: 314 KTMCLDYSDYHSNSK 328
K L H NSK
Sbjct: 287 KGKTLKQYTGHENSK 301
>sp|B4P6P9|LIS1_DROYA Lissencephaly-1 homolog OS=Drosophila yakuba GN=Lis-1 PE=3 SV=1
Length = 411
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 137/336 (40%), Gaps = 65/336 (19%)
Query: 17 PDCVERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKKVTT----- 69
P E+ + + ++ H ++ + ++D IRIW+F + R+ K T
Sbjct: 96 PRPPEKFSLTGHRASITRVIFHPIFGLMVSASEDATIRIWDFETGEYERSLKGHTDSVQD 155
Query: 70 ---------LPRRSSFLSFSKSNTQQQ---------HRDCVSCMAFYHAEGLLYTGSFDK 111
L S+ LS + QQ H VS +AF A + + S D+
Sbjct: 156 VAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDR 215
Query: 112 TVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW-------RRVY 164
T+K W V CV ++ H V + V+ + TCS+D ++++W +
Sbjct: 216 TIKMWEVATG--YCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVEL 273
Query: 165 RENSHTLTMTLKFQQSSVNALALSSFFDNY-------FLYSGSSDGSINFWEKDKMSGGF 217
R++ HT+ +++ +A+ ++ DN FL SGS D +I W+ +S G
Sbjct: 274 RDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWD---VSVGL 330
Query: 218 ------NHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHR 271
H +++G L K + S S+D TIRVW C+ L H+
Sbjct: 331 CLLTLSGHDNWVRG-----LAFHPGGKYLVSASDDKTIRVWDLRN----KRCMKTLYAHQ 381
Query: 272 GPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
S++ K V S S+DQT KVW +
Sbjct: 382 H----FCTSIDFHKA--HPYVISGSVDQTVKVWECR 411
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 98/236 (41%), Gaps = 29/236 (12%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
HR ++ + F+ GL+ + S D T++ W + S H +V + +
Sbjct: 107 HRASITRVIFHPIFGLMVSASEDATIRIWDF--ETGEYERSLKGHTDSVQDVAFDAQGKL 164
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ +CS+D S+K+W + S+ T+ +V+++A D ++ S S D +I
Sbjct: 165 LASCSADLSIKLWD---FQQSYECIKTMHGHDHNVSSVAFVPAGD--YVLSASRDRTIKM 219
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSG-SEDTTIRVWRRAEGGCYHECLAV 266
WE ++ G+ + + + V IE IF+ S D TIRVW C E
Sbjct: 220 WE---VATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVE---- 272
Query: 267 LDGHRGPVRCLAASLEMEKVV--------------MGFLVYSSSLDQTFKVWRVKV 308
L H V C+A + E G + S S D+T ++W V V
Sbjct: 273 LRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSV 328
>sp|B3NPW0|LIS1_DROER Lissencephaly-1 homolog OS=Drosophila erecta GN=Lis-1 PE=3 SV=1
Length = 411
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 137/336 (40%), Gaps = 65/336 (19%)
Query: 17 PDCVERGFIKARHGEVRAILAHD--NMLFTTNKDCKIRIWNFTVSDNFRTKKVTT----- 69
P E+ + + ++ H ++ + ++D IRIW+F + R+ K T
Sbjct: 96 PRPPEKFSLTGHRASITRVIFHPIFGLMVSASEDATIRIWDFETGEYERSLKGHTDSVQD 155
Query: 70 ---------LPRRSSFLSFSKSNTQQQ---------HRDCVSCMAFYHAEGLLYTGSFDK 111
L S+ LS + QQ H VS +AF A + + S D+
Sbjct: 156 VAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDR 215
Query: 112 TVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGFVFTCSSDGSVKIW-------RRVY 164
T+K W V CV ++ H V + V+ + TCS+D ++++W +
Sbjct: 216 TIKMWEVATG--YCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVEL 273
Query: 165 RENSHTLTMTLKFQQSSVNALALSSFFDNY-------FLYSGSSDGSINFWEKDKMSGGF 217
R++ HT+ +++ +A+ ++ DN FL SGS D +I W+ +S G
Sbjct: 274 RDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWD---VSVGL 330
Query: 218 ------NHGGFLQGHCFAVLCLVAIEKLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHR 271
H +++G L K + S S+D TIRVW C+ L H+
Sbjct: 331 CLLTLSGHDNWVRG-----LAFHPGGKYLVSASDDKTIRVWDLRN----KRCMKTLYAHQ 381
Query: 272 GPVRCLAASLEMEKVVMGFLVYSSSLDQTFKVWRVK 307
S++ K V S S+DQT KVW +
Sbjct: 382 H----FCTSIDFHKA--HPYVISGSVDQTVKVWECR 411
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 98/236 (41%), Gaps = 29/236 (12%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
HR ++ + F+ GL+ + S D T++ W + S H +V + +
Sbjct: 107 HRASITRVIFHPIFGLMVSASEDATIRIWDF--ETGEYERSLKGHTDSVQDVAFDAQGKL 164
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ +CS+D S+K+W + S+ T+ +V+++A D ++ S S D +I
Sbjct: 165 LASCSADLSIKLWD---FQQSYECIKTMHGHDHNVSSVAFVPAGD--YVLSASRDRTIKM 219
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSG-SEDTTIRVWRRAEGGCYHECLAV 266
WE ++ G+ + + + V IE IF+ S D TIRVW C E
Sbjct: 220 WE---VATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVE---- 272
Query: 267 LDGHRGPVRCLAASLEMEKVV--------------MGFLVYSSSLDQTFKVWRVKV 308
L H V C+A + E G + S S D+T ++W V V
Sbjct: 273 LRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSV 328
>sp|B4QHG6|LIS1_DROSI Lissencephaly-1 homolog OS=Drosophila simulans GN=Lis-1 PE=3 SV=1
Length = 411
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 129/310 (41%), Gaps = 63/310 (20%)
Query: 41 MLFTTNKDCKIRIWNFTVSDNFRTKKVTT--------------LPRRSSFLSFSKSNTQQ 86
++ + ++D IRIW+F + R+ K T L S+ LS + QQ
Sbjct: 122 LMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQ 181
Query: 87 Q---------HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVN 137
H VS +AF A + + S D+T+K W V CV ++ H V
Sbjct: 182 SYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATG--YCVKTYTGHREWVR 239
Query: 138 AIVVNQDDGFVFTCSSDGSVKIW-------RRVYRENSHTLTMTLKFQQSSVNALALSSF 190
+ V+ + TCS+D ++++W + R++ HT+ +++ +A+ ++
Sbjct: 240 MVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAG 299
Query: 191 FDNY-------FLYSGSSDGSINFWEKDKMSGGF------NHGGFLQGHCFAVLCLVAIE 237
DN FL SGS D +I W+ +S G H +++G L
Sbjct: 300 ADNKKGHHQGPFLASGSRDKTIRIWD---VSVGLCLLTLSGHDNWVRG-----LAFHPGG 351
Query: 238 KLIFSGSEDTTIRVWRRAEGGCYHECLAVLDGHRGPVRCLAASLEMEKVVMGFLVYSSSL 297
K + S S+D TIRVW C+ L H+ S++ K V S S+
Sbjct: 352 KYLVSASDDKTIRVWDLRN----KRCMKTLYAHQH----FCTSIDFHKA--HPYVISGSV 401
Query: 298 DQTFKVWRVK 307
DQT KVW +
Sbjct: 402 DQTVKVWECR 411
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 97/236 (41%), Gaps = 29/236 (12%)
Query: 88 HRDCVSCMAFYHAEGLLYTGSFDKTVKAWRVLDKRCTCVDSFVAHESNVNAIVVNQDDGF 147
HR ++ + F+ L+ + S D T++ W + S H +V + +
Sbjct: 107 HRASITRVIFHPIFALMVSASEDATIRIWDF--ETGEYERSLKGHTDSVQDVAFDAQGKL 164
Query: 148 VFTCSSDGSVKIWRRVYRENSHTLTMTLKFQQSSVNALALSSFFDNYFLYSGSSDGSINF 207
+ +CS+D S+K+W + S+ T+ +V+++A D ++ S S D +I
Sbjct: 165 LASCSADLSIKLWD---FQQSYECIKTMHGHDHNVSSVAFVPAGD--YVLSASRDRTIKM 219
Query: 208 WEKDKMSGGFNHGGFLQGHCFAVLCLVAIEKLIFSG-SEDTTIRVWRRAEGGCYHECLAV 266
WE ++ G+ + + + V IE IF+ S D TIRVW C E
Sbjct: 220 WE---VATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVE---- 272
Query: 267 LDGHRGPVRCLAASLEMEKVV--------------MGFLVYSSSLDQTFKVWRVKV 308
L H V C+A + E G + S S D+T ++W V V
Sbjct: 273 LRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSV 328
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.133 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 131,082,396
Number of Sequences: 539616
Number of extensions: 5120177
Number of successful extensions: 25866
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 371
Number of HSP's successfully gapped in prelim test: 866
Number of HSP's that attempted gapping in prelim test: 16122
Number of HSP's gapped (non-prelim): 5557
length of query: 358
length of database: 191,569,459
effective HSP length: 119
effective length of query: 239
effective length of database: 127,355,155
effective search space: 30437882045
effective search space used: 30437882045
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 62 (28.5 bits)