BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038544
(69 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q700D9|MYBF_ARATH Putative Myb family transcription factor At1g14600 OS=Arabidopsis
thaliana GN=At1g14600 PE=2 SV=2
Length = 255
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 51/61 (83%)
Query: 8 GVRQYNKSELPRLRWTPELHKHFSQAVERLGGKYKASPKRILHMMNVKGLKLSHIKSHLQ 67
GVR Y +S +PRLRWTPELH+ F AV+ LGG+YKA+PK +L +M+VKGL +SH+KSHLQ
Sbjct: 14 GVRPYVRSPVPRLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHLQ 73
Query: 68 V 68
+
Sbjct: 74 M 74
>sp|Q9FJV5|KAN4_ARATH Probable transcription factor KAN4 OS=Arabidopsis thaliana GN=KAN4
PE=1 SV=1
Length = 276
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 18 PRLRWTPELHKHFSQAVERLGGKYKASPKRILHMMNVKGLKLSHIKSHLQV 68
PR+RWT LH HF AV+ LGG +A+PK +L +MNVK L L+H+KSHLQ+
Sbjct: 106 PRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQM 156
>sp|Q9SAK5|APL_ARATH Myb family transcription factor APL OS=Arabidopsis thaliana
GN=APL PE=2 SV=2
Length = 358
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 38/50 (76%)
Query: 18 PRLRWTPELHKHFSQAVERLGGKYKASPKRILHMMNVKGLKLSHIKSHLQ 67
PRLRWT ELH+ F AV +LGG KA+PK I+ +M VKGL L H+KSHLQ
Sbjct: 35 PRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ 84
>sp|Q941I2|KAN3_ARATH Probable transcription factor KAN3 OS=Arabidopsis thaliana GN=KAN3
PE=2 SV=1
Length = 322
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 39/51 (76%)
Query: 18 PRLRWTPELHKHFSQAVERLGGKYKASPKRILHMMNVKGLKLSHIKSHLQV 68
PR+RWT LH HF AV+ LGG +A+PK +L +M+V+ L L+H+KSHLQ+
Sbjct: 165 PRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMDVQDLTLAHVKSHLQM 215
>sp|Q9C616|KAN2_ARATH Probable transcription factor KAN2 OS=Arabidopsis thaliana GN=KAN2
PE=2 SV=1
Length = 388
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 18 PRLRWTPELHKHFSQAVERLGGKYKASPKRILHMMNVKGLKLSHIKSHLQV 68
PR+RWT LH F AVE LGG +A+PK +L +M+VK L L+H+KSHLQ+
Sbjct: 214 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQM 264
>sp|Q93WJ9|KAN1_ARATH Transcription repressor KAN1 OS=Arabidopsis thaliana GN=KAN1 PE=1
SV=1
Length = 403
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 18 PRLRWTPELHKHFSQAVERLGGKYKASPKRILHMMNVKGLKLSHIKSHLQV 68
PR+RWT LH F AVE LGG +A+PK +L +M+VK L L+H+KSHLQ+
Sbjct: 220 PRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQM 270
>sp|Q8GUN5|PHL1_ARATH Protein PHR1-LIKE 1 OS=Arabidopsis thaliana GN=PHL1 PE=1 SV=1
Length = 413
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 19 RLRWTPELHKHFSQAVERLGGKYKASPKRILHMMNVKGLKLSHIKSHLQ 67
R+RWTPELH+ F +AV +LGG +A+PK +L ++N GL + H+KSHLQ
Sbjct: 233 RMRWTPELHEAFVEAVNQLGGSERATPKAVLKLLNNPGLTIYHVKSHLQ 281
>sp|Q0J235|ROLL9_ORYSJ Probable transcription factor RL9 OS=Oryza sativa subsp. japonica
GN=RL9 PE=2 SV=2
Length = 532
Score = 65.9 bits (159), Expect = 8e-11, Method: Composition-based stats.
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 18 PRLRWTPELHKHFSQAVERLGGKYKASPKRILHMMNVKGLKLSHIKSHLQV 68
PR+RWT LH F AVE LGG +A+PK +L +M+VK L L+H+KSHLQ+
Sbjct: 325 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQM 375
>sp|Q9FFH0|GLK2_ARATH Transcription activator GLK2 OS=Arabidopsis thaliana GN=GLK2 PE=2
SV=1
Length = 386
Score = 59.3 bits (142), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 18 PRLRWTPELHKHFSQAVERLGGKYKASPKRILHMMNVKGLKLSHIKSHLQ 67
P++ WTPELH+ F QAVE+LG KA P RIL +MNVK L ++ SHLQ
Sbjct: 148 PKVDWTPELHRKFVQAVEQLGVD-KAVPSRILEIMNVKSLTRHNVASHLQ 196
>sp|Q9LZJ8|ARR20_ARATH Putative two-component response regulator ARR20 OS=Arabidopsis
thaliana GN=ARR20 PE=2 SV=1
Length = 426
Score = 56.2 bits (134), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/54 (51%), Positives = 36/54 (66%), Gaps = 4/54 (7%)
Query: 18 PRLRWTPELHKHFSQAVERLGGKYKASPKRILHMM----NVKGLKLSHIKSHLQ 67
PR++WTPELH F AVE++G KA PK IL M NV+GL +++ SHLQ
Sbjct: 212 PRMQWTPELHHKFEVAVEKMGSLEKAFPKTILKYMQEELNVQGLTRNNVASHLQ 265
>sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2 OS=Arabidopsis thaliana
GN=ARR2 PE=1 SV=1
Length = 664
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 18 PRLRWTPELHKHFSQAVERLGGKYKASPKRILHMMNVKGLKLSHIKSHLQ 67
PR+ W+ ELH+ F AV +LG KA PK+IL MMNV GL ++ SHLQ
Sbjct: 217 PRVVWSVELHQQFVAAVNQLGVD-KAVPKKILEMMNVPGLTRENVASHLQ 265
>sp|Q940D0|ARR1_ARATH Two-component response regulator ARR1 OS=Arabidopsis thaliana
GN=ARR1 PE=1 SV=2
Length = 690
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 18 PRLRWTPELHKHFSQAVERLGGKYKASPKRILHMMNVKGLKLSHIKSHLQ 67
PR+ W+ ELH+ F AV +LG + KA PK+IL +MNV GL ++ SHLQ
Sbjct: 238 PRVVWSVELHQQFVAAVNQLGVE-KAVPKKILELMNVPGLTRENVASHLQ 286
>sp|Q5Z5I4|GLK1_ORYSJ Probable transcription factor GLK1 OS=Oryza sativa subsp. japonica
GN=GLK1 PE=2 SV=1
Length = 455
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/46 (56%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 22 WTPELHKHFSQAVERLGGKYKASPKRILHMMNVKGLKLSHIKSHLQ 67
WTPELH+ F QAVE+LG KA P RIL +M + L +I SHLQ
Sbjct: 185 WTPELHRRFVQAVEQLGID-KAVPSRILEIMGIDSLTRHNIASHLQ 229
>sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR2 OS=Arabidopsis thaliana
GN=APRR2 PE=2 SV=2
Length = 535
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 13 NKSELPRLRWTPELHKHFSQAVERLGGKYKASPKRILHMMNVKGLKLSHIKSHLQ 67
NK+ ++ WTPELHK F QAVE+LG +A P RIL +M V L ++ SHLQ
Sbjct: 292 NKTSRKKVDWTPELHKKFVQAVEQLGVD-QAIPSRILELMKVGTLTRHNVASHLQ 345
>sp|Q9M9B9|ARR19_ARATH Putative two-component response regulator ARR19 OS=Arabidopsis
thaliana GN=ARR19 PE=2 SV=2
Length = 407
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Query: 10 RQYNKSELPRLRWTPELHKHFSQAVERLGGKYKASPKRI---LHMMNVKGLKLSHIKSHL 66
+Q K PR+ WT ELH+ F +A+E +GG KA+PK + L M ++G+ S++ SHL
Sbjct: 208 KQGKKPRKPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVECLQEMRIEGITRSNVASHL 267
Query: 67 Q 67
Q
Sbjct: 268 Q 268
>sp|Q8L9Y3|ARR14_ARATH Two-component response regulator ARR14 OS=Arabidopsis thaliana
GN=ARR14 PE=1 SV=2
Length = 382
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 19 RLRWTPELHKHFSQAVERLGGKYKASPKRILHMMNVKGLKLSHIKSHLQ 67
R+ W+ ELH+ F AV +LG KA PKRIL +MNV GL ++ SHLQ
Sbjct: 202 RVVWSIELHQQFVNAVNKLGID-KAVPKRILELMNVPGLSRENVASHLQ 249
>sp|Q5NAN5|GLK2_ORYSJ Probable transcription factor GLK2 OS=Oryza sativa subsp. japonica
GN=GLK2 PE=2 SV=1
Length = 539
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 19 RLRWTPELHKHFSQAVERLGGKYKASPKRILHMMNVKGLKLSHIKSHLQ 67
++ WTPELH+ F QAVE+LG KA P RIL +M ++ L +I SHLQ
Sbjct: 217 KVDWTPELHRRFVQAVEQLGID-KAVPSRILELMGIECLTRHNIASHLQ 264
>sp|Q9FGT7|ARR18_ARATH Two-component response regulator ARR18 OS=Arabidopsis thaliana
GN=ARR18 PE=2 SV=2
Length = 635
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 18 PRLRWTPELHKHFSQAVERLGGKYKASPKRILHMMNVKGLKLSHIKSHLQ 67
PR+ W+ ELH+ F AV++LG KA PK+IL +M+++GL ++ SHLQ
Sbjct: 195 PRVVWSQELHQKFVSAVQQLGLD-KAVPKKILDLMSIEGLTRENVASHLQ 243
>sp|Q7Y0W3|EHD1_ORYSI Two-component response regulator EHD1 OS=Oryza sativa subsp. indica
PE=2 SV=1
Length = 341
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/65 (46%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 3 NSQRTGVRQYNKSELPRLRWTPELHKHFSQAVERLGGKYKASPKRILHMMNVKGLKLSHI 62
N + T +R KS RL WT +LH+ F AV LG + KA PK+IL +M VK L +
Sbjct: 187 NGEITDIRDLGKS---RLTWTTQLHRQFIAAVNHLG-EDKAVPKKILGIMKVKHLTREQV 242
Query: 63 KSHLQ 67
SHLQ
Sbjct: 243 ASHLQ 247
>sp|Q7Y0W5|EHD1_ORYSJ Two-component response regulator EHD1 OS=Oryza sativa subsp.
japonica GN=EHD1 PE=1 SV=1
Length = 341
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/65 (46%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 3 NSQRTGVRQYNKSELPRLRWTPELHKHFSQAVERLGGKYKASPKRILHMMNVKGLKLSHI 62
N + T +R KS RL WT +LH+ F AV LG + KA PK+IL +M VK L +
Sbjct: 187 NGEITDIRDLGKS---RLTWTTQLHRQFIAAVNHLG-EDKAVPKKILGIMKVKHLTREQV 242
Query: 63 KSHLQ 67
SHLQ
Sbjct: 243 ASHLQ 247
>sp|Q9FXD6|ARR11_ARATH Two-component response regulator ARR11 OS=Arabidopsis thaliana
GN=ARR11 PE=1 SV=1
Length = 521
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 19 RLRWTPELHKHFSQAVERLGGKYKASPKRILHMMNVKGLKLSHIKSHLQ 67
R+ W+ ELH F AV ++G +KA PK+IL +MNV L ++ SHLQ
Sbjct: 195 RVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVASHLQ 243
>sp|Q9SIV3|GLK1_ARATH Transcription activator GLK1 OS=Arabidopsis thaliana GN=GLK1 PE=2
SV=2
Length = 420
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 19 RLRWTPELHKHFSQAVERLGGKYKASPKRILHMMNVKGLKLSHIKSHLQ 67
++ WTPELH+ F +AVE+LG KA P RIL +M V L ++ SHLQ
Sbjct: 155 KVDWTPELHRRFVEAVEQLGVD-KAVPSRILELMGVHCLTRHNVASHLQ 202
>sp|P62598|ARR12_ARATH Two-component response regulator ARR12 OS=Arabidopsis thaliana
GN=ARR12 PE=2 SV=2
Length = 596
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 19 RLRWTPELHKHFSQAVERLGGKYKASPKRILHMMNVKGLKLSHIKSHLQ 67
R+ WT ELHK F AV +LG + KA PK+IL +MNV+ L ++ SHLQ
Sbjct: 197 RVVWTVELHKKFVAAVNQLGYE-KAMPKKILDLMNVEKLTRENVASHLQ 244
>sp|O49397|ARR10_ARATH Two-component response regulator ARR10 OS=Arabidopsis thaliana
GN=ARR10 PE=1 SV=1
Length = 552
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 18 PRLRWTPELHKHFSQAVERLGGKYKASPKRILHMMNVKGLKLSHIKSHLQ 67
PR+ WT ELH F AV+ LG + +A PK+IL +MNV L ++ SHLQ
Sbjct: 184 PRVLWTHELHNKFLAAVDHLGVE-RAVPKKILDLMNVDKLTRENVASHLQ 232
>sp|Q9LYP5|ARR21_ARATH Putative two-component response regulator ARR21 OS=Arabidopsis
thaliana GN=ARR21 PE=2 SV=3
Length = 613
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 19 RLRWTPELHKHFSQAVERLGGKYKASPKRILHMMNVKGLKLSHIKSHLQ 67
+++WT LH F QA+ +G KA PK+IL M+V L ++ SHLQ
Sbjct: 224 KIQWTDSLHDLFLQAIRHIGLD-KAVPKKILAFMSVPYLTRENVASHLQ 271
>sp|Q9FJ16|APRR4_ARATH Putative two-component response regulator-like APRR4 OS=Arabidopsis
thaliana GN=APRR4 PE=3 SV=1
Length = 292
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 19 RLRWTPELHKHFSQAVERLGGKYKASPKRILHMMNVKGLKLSHIKSHLQV 68
R+ W ELH++F AV+ LG + +A PK+IL +M V + ++ SHLQV
Sbjct: 225 RVVWDEELHQNFLNAVDFLGLE-RAVPKKILDVMKVDYISRENVASHLQV 273
>sp|Q9ZVD3|ARR13_ARATH Putative two-component response regulator ARR13 OS=Arabidopsis
thaliana GN=ARR13 PE=2 SV=2
Length = 572
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 19 RLRWTPELHKHFSQAVERLGGKYKASPKRILHMMNVKGLKLSHIKSHLQ 67
++ WT L F QA++ +G K PK+IL +MNV L ++ SHLQ
Sbjct: 227 KIWWTNPLQDLFLQAIQHIGYD-KVVPKKILAIMNVPYLTRENVASHLQ 274
>sp|Q9C9F6|APRR6_ARATH Putative two-component response regulator-like APRR6 OS=Arabidopsis
thaliana GN=APRR6 PE=3 SV=2
Length = 755
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 22 WTPELHKHFSQAVERLGGKYKASPKRILHMMNVKGLKLSHIKSHLQ 67
W E H F A+ LG + PK IL +MN L + SHLQ
Sbjct: 227 WNSERHMKFIAAISILG-EEDFRPKSILEIMNDPNLTHRQVGSHLQ 271
>sp|Q03046|CEFD_NOCLA Isopenicillin N epimerase OS=Nocardia lactamdurans GN=cefD PE=3
SV=1
Length = 398
Score = 29.6 bits (65), Expect = 6.2, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 12/69 (17%)
Query: 1 MRNSQRTGVRQYNKSELPRLRWTPELHKHFSQAVERLGGKYKASPKRILHMMNVKG---L 57
+R G + +LP L WT A ERL G A P+R+ NV G L
Sbjct: 40 VRARMAAGPMDFLSRQLPPLLWT---------ARERLAGYLGARPERLAFATNVTGAVNL 90
Query: 58 KLSHIKSHL 66
S ++ HL
Sbjct: 91 VASSVQPHL 99
>sp|Q149F3|ERF3B_MOUSE Eukaryotic peptide chain release factor GTP-binding subunit ERF3B
OS=Mus musculus GN=Gspt2 PE=1 SV=1
Length = 632
Score = 29.3 bits (64), Expect = 6.6, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 13 NKSELPRLRWTPELHKHFSQAVERLGGKYKASPKRILHMMNVKGLKLSHIKSH 65
NK + P + W+ E ++ + + K SPK+ +H M GL ++IK
Sbjct: 353 NKMDDPTVDWSSERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQ 405
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.131 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,770,279
Number of Sequences: 539616
Number of extensions: 768804
Number of successful extensions: 1948
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1907
Number of HSP's gapped (non-prelim): 32
length of query: 69
length of database: 191,569,459
effective HSP length: 41
effective length of query: 28
effective length of database: 169,445,203
effective search space: 4744465684
effective search space used: 4744465684
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)