Your job contains 1 sequence.
>038551
MTLRIASTINKEKENFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCPRLRT
LFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLP
IELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRALRMFECGFNVELEADSILFGDSEV
LVEELLVLKHLNLLTITLQSFGALQRLLSYCRLGSISTQCLCLRHLNNSNSLSVFAFASL
RHLRTLQLYFNDLEELKIDAGELKRIREICGFHSLQKVFYKILKIEARDMACTCSQYQAC
PRGLTKFEEHPLKRLECAELKELPLDCNHGLEQKIIIKGQEHWWNELQWDDLSTQNAFLP
CFESLY
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038551
(366 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2166320 - symbol:AT5G63020 species:3702 "Arabi... 323 3.7e-34 2
TAIR|locus:2034765 - symbol:AT1G12290 species:3702 "Arabi... 290 7.8e-31 2
TAIR|locus:2197739 - symbol:AT1G61300 species:3702 "Arabi... 309 8.0e-31 2
TAIR|locus:2008510 - symbol:AT1G61190 "AT1G61190" species... 299 2.1e-30 2
TAIR|locus:2008440 - symbol:AT1G61180 species:3702 "Arabi... 301 4.2e-30 2
TAIR|locus:2201986 - symbol:RFL1 "AT1G12210" species:3702... 278 1.5e-29 2
TAIR|locus:2153474 - symbol:AT5G05400 species:3702 "Arabi... 252 2.1e-29 2
TAIR|locus:2132741 - symbol:AT4G10780 species:3702 "Arabi... 259 4.4e-27 2
TAIR|locus:2036214 - symbol:AT1G15890 species:3702 "Arabi... 296 4.3e-25 1
TAIR|locus:2034770 - symbol:SUMM2 "AT1G12280" species:370... 295 6.0e-25 1
TAIR|locus:2031356 - symbol:AT1G63360 species:3702 "Arabi... 276 6.4e-23 1
TAIR|locus:2031366 - symbol:AT1G63350 "AT1G63350" species... 267 6.0e-22 1
TAIR|locus:2005517 - symbol:RPS2 "RESISTANT TO P. SYRINGA... 260 3.5e-21 1
TAIR|locus:2171589 - symbol:AT5G47260 species:3702 "Arabi... 253 3.8e-21 2
TAIR|locus:2203881 - symbol:AT1G62630 species:3702 "Arabi... 257 7.0e-21 1
TAIR|locus:2170892 - symbol:AT5G43730 species:3702 "Arabi... 255 4.2e-20 1
TAIR|locus:2201996 - symbol:RPS5 "AT1G12220" species:3702... 252 1.9e-19 1
TAIR|locus:2171579 - symbol:AT5G47250 species:3702 "Arabi... 232 1.1e-16 1
TAIR|locus:2170902 - symbol:AT5G43740 species:3702 "Arabi... 230 2.0e-16 1
MGI|MGI:3045226 - symbol:Tlr11 "toll-like receptor 11" sp... 153 4.3e-09 2
TAIR|locus:2136447 - symbol:AT4G27190 species:3702 "Arabi... 101 1.8e-07 2
TAIR|locus:2131689 - symbol:AT4G27220 species:3702 "Arabi... 128 2.4e-07 2
UNIPROTKB|E1BWI3 - symbol:RSU1 "Uncharacterized protein" ... 130 1.7e-06 1
ZFIN|ZDB-GENE-010306-4 - symbol:slit3 "slit (Drosophila) ... 137 2.1e-06 2
UNIPROTKB|Q5E9C0 - symbol:RSU1 "Ras suppressor protein 1"... 134 2.2e-06 1
UNIPROTKB|E2R9R1 - symbol:RSU1 "Uncharacterized protein" ... 134 2.2e-06 1
UNIPROTKB|Q15404 - symbol:RSU1 "Ras suppressor protein 1"... 134 2.2e-06 1
MGI|MGI:1914394 - symbol:Lrrc40 "leucine rich repeat cont... 124 2.9e-06 2
MGI|MGI:1927197 - symbol:Shoc2 "soc-2 (suppressor of clea... 131 4.0e-06 2
UNIPROTKB|F1P0K8 - symbol:Gga.13956 "Uncharacterized prot... 138 4.5e-06 1
UNIPROTKB|Q50L44 - symbol:LINGO1 "Leucine-rich repeat and... 137 4.7e-06 1
UNIPROTKB|Q8TF66 - symbol:LRRC15 "Leucine-rich repeat-con... 136 5.6e-06 1
ZFIN|ZDB-GENE-010306-3 - symbol:slit2 "slit (Drosophila) ... 143 6.2e-06 2
UNIPROTKB|E1BS02 - symbol:RSU1 "Uncharacterized protein" ... 130 6.4e-06 1
UNIPROTKB|D6RAP2 - symbol:TLR1 "Toll-like receptor 1" spe... 116 6.5e-06 1
RGD|1309601 - symbol:Lrrc8d "leucine rich repeat containi... 137 7.4e-06 1
RGD|1591781 - symbol:Rsu1 "Ras suppressor protein 1" spec... 128 7.8e-06 1
UNIPROTKB|F1MBT2 - symbol:LINGO1 "Uncharacterized protein... 135 7.9e-06 1
UNIPROTKB|Q96FE5 - symbol:LINGO1 "Leucine-rich repeat and... 135 8.0e-06 1
UNIPROTKB|F1SJ87 - symbol:LINGO1 "Uncharacterized protein... 135 8.0e-06 1
UNIPROTKB|E2RJ80 - symbol:PIDD "Uncharacterized protein" ... 137 8.0e-06 1
TAIR|locus:2052367 - symbol:RLP29 "receptor like protein ... 133 8.5e-06 1
UNIPROTKB|B4DHD1 - symbol:RXFP1 "Relaxin receptor 1" spec... 135 8.6e-06 1
WB|WBGene00004854 - symbol:slt-1 species:6239 "Caenorhabd... 127 1.1e-05 2
ZFIN|ZDB-GENE-080219-38 - symbol:zgc:172282 "zgc:172282" ... 134 1.2e-05 1
FB|FBgn0033984 - symbol:Lap1 "Lap1" species:7227 "Drosoph... 135 1.2e-05 1
UNIPROTKB|I3LT51 - symbol:LGR5 "Uncharacterized protein" ... 84 1.2e-05 2
UNIPROTKB|K7EP27 - symbol:FLII "Protein flightless-1 homo... 109 1.3e-05 1
MGI|MGI:1915522 - symbol:Lingo1 "leucine rich repeat and ... 133 1.3e-05 1
UNIPROTKB|G3V881 - symbol:Lingo1 "Leucine rich repeat neu... 133 1.3e-05 1
UNIPROTKB|Q9BXB1 - symbol:LGR4 "Leucine-rich repeat-conta... 135 1.4e-05 1
UNIPROTKB|Q7L1W4 - symbol:LRRC8D "Leucine-rich repeat-con... 134 1.6e-05 1
TAIR|locus:2827587 - symbol:PIRL5 "AT2G17440" species:370... 131 1.7e-05 1
RGD|70551 - symbol:Lrrc15 "leucine rich repeat containing... 131 2.0e-05 1
UNIPROTKB|F1S6B4 - symbol:PRELP "Uncharacterized protein"... 128 2.1e-05 1
RGD|1564460 - symbol:Tlr11 "toll-like receptor 11" specie... 122 2.5e-05 2
MGI|MGI:1922368 - symbol:Lrrc8d "leucine rich repeat cont... 132 2.6e-05 1
UNIPROTKB|F1Q3G2 - symbol:SLIT3 "Uncharacterized protein"... 119 2.8e-05 2
UNIPROTKB|F1PGX0 - symbol:LINGO1 "Uncharacterized protein... 130 2.8e-05 1
ZFIN|ZDB-GENE-030722-3 - symbol:slit1a "slit homolog 1a (... 119 3.1e-05 2
UNIPROTKB|Q9HBL6 - symbol:LRTM1 "Leucine-rich repeat and ... 126 3.1e-05 1
UNIPROTKB|Q6NSJ5 - symbol:LRRC8E "Leucine-rich repeat-con... 130 4.0e-05 1
TAIR|locus:2197563 - symbol:AT1G33590 species:3702 "Arabi... 127 4.1e-05 1
RGD|1302973 - symbol:Rxfp1 "relaxin/insulin-like family p... 129 4.8e-05 1
ZFIN|ZDB-GENE-030722-4 - symbol:slit1b "slit homolog 1b (... 133 5.0e-05 2
RGD|1308146 - symbol:Shoc2 "soc-2 (suppressor of clear) h... 122 5.0e-05 2
MGI|MGI:103040 - symbol:Rsu1 "Ras suppressor protein 1" s... 122 5.3e-05 1
UNIPROTKB|E9PCA3 - symbol:RXFP1 "Relaxin receptor 1" spec... 128 5.3e-05 1
UNIPROTKB|F1MLX5 - symbol:LGR4 "Uncharacterized protein" ... 130 5.5e-05 1
RGD|69311 - symbol:Slit3 "slit homolog 3 (Drosophila)" sp... 123 5.8e-05 2
UNIPROTKB|O88280 - symbol:Slit3 "Slit homolog 3 protein" ... 123 5.8e-05 2
UNIPROTKB|Q9HBX9 - symbol:RXFP1 "Relaxin receptor 1" spec... 128 6.2e-05 1
UNIPROTKB|E1BP10 - symbol:SLIT1 "Uncharacterized protein"... 121 6.3e-05 2
ZFIN|ZDB-GENE-050522-29 - symbol:zgc:113307 "zgc:113307" ... 123 6.6e-05 1
ZFIN|ZDB-GENE-050506-25 - symbol:lrrc30 "leucine rich rep... 109 6.6e-05 2
MGI|MGI:1921738 - symbol:Lrrc15 "leucine rich repeat cont... 126 7.2e-05 1
RGD|69310 - symbol:Slit2 "slit homolog 2 (Drosophila)" sp... 127 7.4e-05 2
MGI|MGI:1315202 - symbol:Slit3 "slit homolog 3 (Drosophil... 122 7.5e-05 2
ZFIN|ZDB-GENE-091214-3 - symbol:lingo4b "leucine rich rep... 126 7.6e-05 1
UNIPROTKB|E7EQW9 - symbol:ERBB2IP "Protein LAP2" species:... 130 7.6e-05 1
UNIPROTKB|Q96RT1 - symbol:ERBB2IP "Protein LAP2" species:... 130 7.9e-05 1
UNIPROTKB|F1NRN7 - symbol:SHOC2 "Leucine-rich repeat prot... 119 8.3e-05 2
UNIPROTKB|Q5F4C4 - symbol:SHOC2 "Leucine-rich repeat prot... 119 8.3e-05 2
ZFIN|ZDB-GENE-041008-23 - symbol:fmoda "fibromodulin a" s... 122 8.5e-05 1
UNIPROTKB|P22792 - symbol:CPN2 "Carboxypeptidase N subuni... 125 8.5e-05 1
UNIPROTKB|F1RR92 - symbol:SLIT3 "Uncharacterized protein"... 125 8.5e-05 3
MGI|MGI:1919517 - symbol:Lrrc8e "leucine rich repeat cont... 127 8.5e-05 1
ZFIN|ZDB-GENE-061013-487 - symbol:lrrc8db "leucine rich r... 127 9.1e-05 1
UNIPROTKB|F1NF14 - symbol:SLIT3 "Uncharacterized protein"... 121 9.1e-05 2
UNIPROTKB|F1MMM6 - symbol:SLIT3 "Uncharacterized protein"... 119 9.5e-05 2
DICTYBASE|DDB_G0291532 - symbol:DDB_G0291532 species:4468... 120 9.7e-05 1
UNIPROTKB|F1NHG5 - symbol:SLIT2 "Uncharacterized protein"... 134 9.8e-05 2
UNIPROTKB|E1BU15 - symbol:SHOC2 "Leucine-rich repeat prot... 119 0.00011 2
UNIPROTKB|Q5T0V0 - symbol:SLIT1 "Slit homolog 1 protein" ... 122 0.00011 2
TAIR|locus:2010326 - symbol:PIRL3 "AT1G12970" species:370... 123 0.00011 1
UNIPROTKB|F1PE17 - symbol:RXFP1 "Uncharacterized protein"... 125 0.00012 1
ZFIN|ZDB-GENE-080327-28 - symbol:fmodb "fibromodulin b" s... 122 0.00012 1
UNIPROTKB|O75093 - symbol:SLIT1 "Slit homolog 1 protein" ... 122 0.00012 2
UNIPROTKB|F1PSS7 - symbol:SLIT1 "Uncharacterized protein"... 121 0.00012 2
UNIPROTKB|F1LS74 - symbol:Slit1 "Slit homolog 1 protein" ... 122 0.00013 2
WARNING: Descriptions of 74 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2166320 [details] [associations]
symbol:AT5G63020 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006952 "defense response"
evidence=IEA;ISS] [GO:0043531 "ADP binding" evidence=IEA]
InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931 PRINTS:PR00364
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006952
GO:GO:0043531 HOGENOM:HOG000238348 eggNOG:KOG4658 EMBL:AB009051
EMBL:U97223 EMBL:AY080696 IPI:IPI00529788 RefSeq:NP_201107.2
UniGene:At.49209 UniGene:At.68259 ProteinModelPortal:Q8RXS5
SMR:Q8RXS5 EnsemblPlants:AT5G63020.1 GeneID:836422
KEGG:ath:AT5G63020 TAIR:At5g63020 InParanoid:Q8RXS5 OMA:NTSSANH
PhylomeDB:Q8RXS5 ArrayExpress:Q8RXS5 Genevestigator:Q8RXS5
GermOnline:AT5G63020 Uniprot:Q8RXS5
Length = 888
Score = 323 (118.8 bits), Expect = 3.7e-34, Sum P(2) = 3.7e-34
Identities = 99/262 (37%), Positives = 133/262 (50%)
Query: 1 MTLRIASTINKEKENFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCPRLRT 60
M L IAS K+KENF+V AG+ P I WK R+SLM N I+++ + P P+L T
Sbjct: 478 MALWIASDFGKQKENFIVQAGLQSRNIPEIEKWKVARRVSLMFNNIESIRDAPESPQLIT 537
Query: 61 LFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLP 120
L L N LG +S++FF M L VL LS NR L +LP I VSLQ+L +S T I P
Sbjct: 538 LLLRKNFLGHISSSFFRLMPMLVVLDLSMNRDLRHLPNEISECVSLQYLSLSRTRIRIWP 597
Query: 121 IELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRALRMFECGFNVELEADSILFGDSXX 180
L L L LNLEYT + I IS L L+ LR+F GF D + +
Sbjct: 598 AGLVELRKLLYLNLEYTRMVESICG--ISGLTSLKVLRLFVSGF----PEDPCVLNE--- 648
Query: 181 XXXXXXXXXXXXXXTITLQSFGALQRLLSYCRLGSISTQCLCLRHLNNSNSLSVFAFASL 240
TITL L++ LS RL S T+ L + +LN +S+ F A++
Sbjct: 649 ----LQLLENLQTLTITLGLASILEQFLSNQRLASC-TRALRIENLNPQSSVISFV-ATM 702
Query: 241 RHLRTLQLYFNDLEELKIDAGE 262
L+ L +D+ E+K+ E
Sbjct: 703 DSLQELHFADSDIWEIKVKRNE 724
Score = 85 (35.0 bits), Expect = 3.7e-34, Sum P(2) = 3.7e-34
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 317 CAELKELPLDCNHGLEQKIIIKGQEHWWNELQWDDLSTQNAFLPCFES 364
C+EL++LPL+ ++I+ + W L+W+D +T+ FLP ++
Sbjct: 827 CSELRKLPLNFTSVPRGDLVIEAHKKWIEILEWEDEATKARFLPTLKA 874
>TAIR|locus:2034765 [details] [associations]
symbol:AT1G12290 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006952 "defense response"
evidence=IEA;ISS] [GO:0043531 "ADP binding" evidence=IEA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931 PRINTS:PR00364
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0006952
GO:GO:0043531 EMBL:AC025416 HOGENOM:HOG000238348
ProtClustDB:CLSN2682239 IPI:IPI00516844 RefSeq:NP_172693.1
UniGene:At.42082 ProteinModelPortal:P60839 SMR:P60839
EnsemblPlants:AT1G12290.1 GeneID:837783 KEGG:ath:AT1G12290
TAIR:At1g12290 eggNOG:NOG274408 InParanoid:P60839 OMA:NIEERES
PhylomeDB:P60839 ArrayExpress:P60839 Genevestigator:P60839
GermOnline:AT1G12290 Uniprot:P60839
Length = 884
Score = 290 (107.1 bits), Expect = 7.8e-31, Sum P(2) = 7.8e-31
Identities = 71/161 (44%), Positives = 94/161 (58%)
Query: 1 MTLRIASTINKEKENFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCPRLRT 60
M L IAS + K K+N +V AG L E P + WK +RMSL+ N I+ + P CP+L T
Sbjct: 485 MALWIASDLRKHKDNCIVRAGFRLNEIPKVKDWKVVSRMSLVNNRIKEIHGSPECPKLTT 544
Query: 61 LFLPSN-HLGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTL 119
LFL N HL +S FF SM L VL LS+N +L LP I LVSL++LD+S++ I L
Sbjct: 545 LFLQDNRHLVNISGEFFRSMPRLVVLDLSWNVNLSGLPDQISELVSLRYLDLSYSSIGRL 604
Query: 120 PIELKYLVNLKCLNLEYTFRLSRIPQ-QVISDLKMLRALRM 159
P+ L L L LNLE L + +S+LK +R L +
Sbjct: 605 PVGLLKLKKLMHLNLESMLCLESVSGIDHLSNLKTVRLLNL 645
Score = 87 (35.7 bits), Expect = 7.8e-31, Sum P(2) = 7.8e-31
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 316 ECAELKELPLD---CNHGLEQKIIIKGQEHWWNELQWDDLSTQNAFLP 360
+C +L +LPLD C E+ +I G E W ++W+D +T+ FLP
Sbjct: 828 KCRKLTKLPLDSQSCIVAGEELVIQYGDEEWKERVEWEDKATRLRFLP 875
>TAIR|locus:2197739 [details] [associations]
symbol:AT1G61300 species:3702 "Arabidopsis thaliana"
[GO:0006952 "defense response" evidence=IEA;ISS] [GO:0043531 "ADP
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931 PRINTS:PR00364
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0006952 GO:GO:0043531 EMBL:AC004255
HOGENOM:HOG000238348 ProtClustDB:CLSN2681834 EMBL:AK226587
EMBL:AY099608 EMBL:AY128858 IPI:IPI00535662 RefSeq:NP_176325.2
UniGene:At.36488 UniGene:At.74126 ProteinModelPortal:O64790
SMR:O64790 PaxDb:O64790 EnsemblPlants:AT1G61300.1 GeneID:842424
KEGG:ath:AT1G61300 TAIR:At1g61300 eggNOG:KOG4658 InParanoid:O64790
OMA:WITSEEN PhylomeDB:O64790 Genevestigator:O64790
GermOnline:AT1G61300 Uniprot:O64790
Length = 762
Score = 309 (113.8 bits), Expect = 8.0e-31, Sum P(2) = 8.0e-31
Identities = 85/174 (48%), Positives = 95/174 (54%)
Query: 1 MTLRIASTINKEKENFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCPRLRT 60
M L IAS K+KENF+V A VGL E P W RMSLM N I+ +T C L T
Sbjct: 367 MALWIASDFGKQKENFVVRARVGLHERPEAKDWGAVRRMSLMDNHIEEITCESKCSELTT 426
Query: 61 LFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLP 120
LFL SN L +S F M L VL LSYNR LP I LVSLQ LD+S T I LP
Sbjct: 427 LFLQSNQLKNLSGEFIRYMQKLVVLDLSYNRDFNKLPEQISGLVSLQFLDLSNTSIKQLP 486
Query: 121 IELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRALRMFECGFNVELEADSIL 174
+ LK L L LNL YT RL I IS L LR LR+ G V +A S+L
Sbjct: 487 VGLKKLKKLTFLNLAYTVRLCSISG--ISRLLSLRLLRLL--GSKVHGDA-SVL 535
Score = 65 (27.9 bits), Expect = 8.0e-31, Sum P(2) = 8.0e-31
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 315 LECAELKELPLDCNHG--LEQKIIIKGQEHWWNELQWDDLSTQNAFL 359
L+C +L++LPL+ +E+ I NEL+W+D T+N F+
Sbjct: 711 LDCPKLRKLPLNATSVPLVEEFQIRMYPPGLGNELEWEDEDTKNRFV 757
>TAIR|locus:2008510 [details] [associations]
symbol:AT1G61190 "AT1G61190" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0006952
"defense response" evidence=IEA;ISS] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931
PRINTS:PR00364 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005524 GO:GO:0006952 GO:GO:0043531 HOGENOM:HOG000238348
EMBL:AC002294 IPI:IPI00531576 PIR:G96637 RefSeq:NP_176314.1
UniGene:At.36514 UniGene:At.71478 ProteinModelPortal:O22727
SMR:O22727 PaxDb:O22727 PRIDE:O22727 EnsemblPlants:AT1G61190.1
GeneID:842412 KEGG:ath:AT1G61190 TAIR:At1g61190 eggNOG:NOG249426
InParanoid:O22727 OMA:FQQKAFN PhylomeDB:O22727
ProtClustDB:CLSN2681834 Genevestigator:O22727 GermOnline:AT1G61190
Uniprot:O22727
Length = 967
Score = 299 (110.3 bits), Expect = 2.1e-30, Sum P(2) = 2.1e-30
Identities = 82/174 (47%), Positives = 97/174 (55%)
Query: 1 MTLRIASTINKEKENFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCPRLRT 60
M L IAS K+KEN++V A VGL E P + W RMSLM N I+ +T C L T
Sbjct: 482 MALWIASDFGKQKENYVVRARVGLHEIPKVKDWGAVRRMSLMMNEIEEITCESKCSELTT 541
Query: 61 LFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLP 120
LFL SN L +S F M L VL LS+N LP I LVSLQ+LD+SWT I LP
Sbjct: 542 LFLQSNQLKNLSGEFIRYMQKLVVLDLSHNPDFNELPEQISGLVSLQYLDLSWTRIEQLP 601
Query: 121 IELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRALRMFECGFNVELEADSIL 174
+ LK L L LNL +T RL I IS L LR L + E NV +A S+L
Sbjct: 602 VGLKELKKLIFLNLCFTERLCSISG--ISRLLSLRWLSLRES--NVHGDA-SVL 650
Score = 75 (31.5 bits), Expect = 2.1e-30, Sum P(2) = 2.1e-30
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 317 CAELKELPLDCNHG--LEQKIIIKGQEHWWNELQWDDLSTQNAFLPCFESL 365
C +L++LPL+ +E+ I NEL+W+D T+N FLP + L
Sbjct: 832 CPKLRKLPLNATSVPLVEEFEIRMDPPEQENELEWEDEDTKNRFLPSIKPL 882
>TAIR|locus:2008440 [details] [associations]
symbol:AT1G61180 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0006952
"defense response" evidence=IEA;ISS] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931
PRINTS:PR00364 EMBL:CP002684 GO:GO:0005886 GO:GO:0006952
GO:GO:0043531 HOGENOM:HOG000238348 EMBL:AC002294
ProtClustDB:CLSN2681834 IPI:IPI00657523 RefSeq:NP_001031216.1
UniGene:At.21819 UniGene:At.67768 ProteinModelPortal:Q2V4G0
SMR:Q2V4G0 PRIDE:Q2V4G0 EnsemblPlants:AT1G61180.2 GeneID:842411
KEGG:ath:AT1G61180 OMA:WASATTI Genevestigator:Q2V4G0 Uniprot:Q2V4G0
Length = 899
Score = 301 (111.0 bits), Expect = 4.2e-30, Sum P(2) = 4.2e-30
Identities = 83/174 (47%), Positives = 96/174 (55%)
Query: 1 MTLRIASTINKEKENFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCPRLRT 60
M L IAS K+KENF+V AGVGL E P + W +MSLM N I+ +T C L T
Sbjct: 478 MALWIASDFGKQKENFVVQAGVGLHEIPKVKDWGAVRKMSLMDNDIEEITCESKCSELTT 537
Query: 61 LFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLP 120
LFL SN L + F M L VL LSYNR LP I LVSLQ LD+S T I +P
Sbjct: 538 LFLQSNKLKNLPGAFIRYMQKLVVLDLSYNRDFNKLPEQISGLVSLQFLDLSNTSIEHMP 597
Query: 121 IELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRALRMFECGFNVELEADSIL 174
I LK L L L+L YT RL I IS L LR LR+ G V +A S+L
Sbjct: 598 IGLKELKKLTFLDLTYTDRLCSISG--ISRLLSLRLLRLL--GSKVHGDA-SVL 646
Score = 69 (29.3 bits), Expect = 4.2e-30, Sum P(2) = 4.2e-30
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 317 CAELKELPLDCNH--GLEQ-KIIIKGQEHWWNELQWDDLSTQNAFLP 360
C +L++LPL+ +E+ +I + NEL+W+D T+N FLP
Sbjct: 825 CPKLRKLPLNATSVSKVEEFEIHMYPPPEQENELEWEDDDTKNRFLP 871
>TAIR|locus:2201986 [details] [associations]
symbol:RFL1 "AT1G12210" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0006952
"defense response" evidence=IEA;ISS] [GO:0043531 "ADP binding"
evidence=IEA] [GO:0009617 "response to bacterium" evidence=ISS]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931 PRINTS:PR00364
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0009617
GO:GO:0006952 GO:GO:0043531 eggNOG:KOG4658 ProtClustDB:CLSN2682239
EMBL:AC022522 EMBL:AF074916 EMBL:AY062384 EMBL:AY062385
EMBL:AY062386 EMBL:AY062387 EMBL:AY062390 EMBL:AY062391
EMBL:AY062392 EMBL:AY062394 EMBL:AY062398 EMBL:AY062399
EMBL:AY062403 EMBL:AY062404 EMBL:U97224 EMBL:U97226 IPI:IPI00544084
PIR:B86257 RefSeq:NP_172685.1 UniGene:At.51585
ProteinModelPortal:Q8L3R3 SMR:Q8L3R3 PaxDb:Q8L3R3 PRIDE:Q8L3R3
EnsemblPlants:AT1G12210.1 GeneID:837774 KEGG:ath:AT1G12210
TAIR:At1g12210 InParanoid:Q8L3R3 OMA:KWIERVE PhylomeDB:Q8L3R3
Genevestigator:Q8L3R3 GermOnline:AT1G12210 Uniprot:Q8L3R3
Length = 885
Score = 278 (102.9 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 75/160 (46%), Positives = 88/160 (55%)
Query: 1 MTLRIASTINKEKENFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCPRLRT 60
M L I S + K KE +V AG+GL E P + W+ RMSLM N + + P C L T
Sbjct: 483 MALWIFSDLGKHKERCIVQAGIGLDELPEVENWRAVKRMSLMNNNFEKILGSPECVELIT 542
Query: 61 LFLPSNH-LGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTL 119
LFL +N+ L +S FF M SL VL LS N SL LP I LVSLQ+LD+S T I L
Sbjct: 543 LFLQNNYKLVDISMEFFRCMPSLAVLDLSENHSLSELPEEISELVSLQYLDLSGTYIERL 602
Query: 120 PIELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRALRM 159
P L L L L LE T RL I IS L LR LR+
Sbjct: 603 PHGLHELRKLVHLKLERTRRLESISG--ISYLSSLRTLRL 640
Score = 87 (35.7 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 317 CAELKELPLDCNHGLE-QKIIIKGQEHWWNE-LQWDDLSTQNAFLP 360
C +L++LPLD ++ ++ +IK +E W E ++W+D +TQ FLP
Sbjct: 835 CPKLRKLPLDSKSVVKVEEFVIKYKEKKWIERVEWEDEATQYRFLP 880
>TAIR|locus:2153474 [details] [associations]
symbol:AT5G05400 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006952 "defense response"
evidence=IEA;ISS] [GO:0043531 "ADP binding" evidence=IEA]
[GO:0006826 "iron ion transport" evidence=RCA] [GO:0010106
"cellular response to iron ion starvation" evidence=RCA]
[GO:0010167 "response to nitrate" evidence=RCA] [GO:0015706
"nitrate transport" evidence=RCA] InterPro:IPR000767
InterPro:IPR002182 Pfam:PF00931 PRINTS:PR00364 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006952 GO:GO:0043531
EMBL:AB010692 HOGENOM:HOG000238348 IPI:IPI00549165
RefSeq:NP_196159.1 UniGene:At.65489 ProteinModelPortal:Q9FLB4
SMR:Q9FLB4 PaxDb:Q9FLB4 PRIDE:Q9FLB4 EnsemblPlants:AT5G05400.1
GeneID:830422 KEGG:ath:AT5G05400 TAIR:At5g05400 eggNOG:NOG325940
InParanoid:Q9FLB4 OMA:IQEDIGK PhylomeDB:Q9FLB4
ProtClustDB:CLSN2916366 ArrayExpress:Q9FLB4 Genevestigator:Q9FLB4
Uniprot:Q9FLB4
Length = 874
Score = 252 (93.8 bits), Expect = 2.1e-29, Sum P(2) = 2.1e-29
Identities = 94/287 (32%), Positives = 138/287 (48%)
Query: 1 MTLRIASTINKEKE-NFLVL-AGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCPRL 58
M L I+S +K+ N LV+ A L + P I K RMSL+ N I+ E CP+L
Sbjct: 470 MALWISSGCGDQKQKNVLVVEANAQLRDIPKIEDQKAVRRMSLIYNQIEEACESLHCPKL 529
Query: 59 RTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITT 118
TL L N L +S F + L VL LS N +L LP L SL+ L++S TGIT+
Sbjct: 530 ETLLLRDNRLRKISREFLSHVPILMVLDLSLNPNLIELP-SFSPLYSLRFLNLSCTGITS 588
Query: 119 LPIELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRALRMFECGFNVELEADSILFGDS 178
LP L L NL LNLE+T+ L RI + I DL L L+++ G ++ D ++
Sbjct: 589 LPDGLYALRNLLYLNLEHTYMLKRIYE--IHDLPNLEVLKLYASGIDI---TDKLV---- 639
Query: 179 XXXXXXXXXXXXXXXXTITLQSFGALQRLLSYCRLGSISTQCLCLRHLNNSNSLSVFAFA 238
TITL++ L+ L R S T+ L L + SL V A
Sbjct: 640 ----RQIQAMKHLYLLTITLRNSSGLEIFLGDTRFSSY-TEGLTLDEQSYYQSLKV-PLA 693
Query: 239 SLRHLRTLQLYFNDLEELKIDAG-----EL--KRIREICGFHSLQKV 278
++ R L++ + + +++I+ E+ R+R F +L+KV
Sbjct: 694 TISSSRFLEIQDSHIPKIEIEGSSSNESEIVGPRVRRDISFINLRKV 740
Score = 129 (50.5 bits), Expect = 2.1e-29, Sum P(2) = 2.1e-29
Identities = 35/120 (29%), Positives = 60/120 (50%)
Query: 242 HLRTLQLY-FNDLEELKIDAGELKRIREICGFHSLQKVFYKILKIEARDMACTCSQYQAC 300
HL TL + D+E + I E R+++ C + F ++ + R++ S Y+
Sbjct: 759 HLATLYVVCLPDIEHI-ISRSEESRLQKTCELAGVIP-FRELEFLTLRNLGQLKSIYRD- 815
Query: 301 PRGLTKFEEHPLKRLECAELKELPLDCNHGLEQKIIIKGQEHWWNELQWDDLSTQNAFLP 360
P K +E +K C +L +LPLD +Q ++I +E W LQW+D++T+ F P
Sbjct: 816 PLLFGKLKEINIK--SCPKLTKLPLDSRSAWKQNVVINAEEEWLQGLQWEDVATKERFFP 873
Score = 38 (18.4 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 15 NFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLT 50
N ++ GVGL +G +TT +S + N + ++
Sbjct: 168 NSMMEVGVGLLGIYGMGGVGKTTLLSQINNKFRTVS 203
>TAIR|locus:2132741 [details] [associations]
symbol:AT4G10780 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006952 "defense
response" evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA]
InterPro:IPR000767 InterPro:IPR002182 InterPro:IPR003593
Pfam:PF00931 PRINTS:PR00364 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0043531
GO:GO:0017111 HOGENOM:HOG000238348 ProtClustDB:CLSN2682239
EMBL:AF080119 EMBL:AL161518 IPI:IPI00538199 PIR:T01899
RefSeq:NP_192816.1 UniGene:At.65351 ProteinModelPortal:O82484
SMR:O82484 PaxDb:O82484 PRIDE:O82484 EnsemblPlants:AT4G10780.1
GeneID:826674 KEGG:ath:AT4G10780 TAIR:At4g10780 eggNOG:NOG269668
InParanoid:O82484 OMA:WNCEISE PhylomeDB:O82484 ArrayExpress:O82484
Genevestigator:O82484 Uniprot:O82484
Length = 892
Score = 259 (96.2 bits), Expect = 4.4e-27, Sum P(2) = 4.4e-27
Identities = 72/174 (41%), Positives = 91/174 (52%)
Query: 1 MTLRIASTINKEKENFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCPRLRT 60
M L S + K KE +V AG GL + P + W R+SLM N I+ ++ P CP L T
Sbjct: 481 MALWTLSDLGKNKERCIVQAGSGLRKVPKVEDWGAVRRLSLMNNGIEEISGSPECPELTT 540
Query: 61 LFLPSNH-LGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTL 119
LFL N L +S FF M L VL LS N L+ LP I LV+L++LD+S T I L
Sbjct: 541 LFLQENKSLVHISGEFFRHMRKLVVLDLSENHQLDGLPEQISELVALRYLDLSHTNIEGL 600
Query: 120 PIELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRALRMFECGFNVELEADSI 173
P L+ L L LNLE RL I IS L LR L + N+ L+ S+
Sbjct: 601 PACLQDLKTLIHLNLECMRRLGSIAG--ISKLSSLRTLGLRNS--NIMLDVMSV 650
Score = 83 (34.3 bits), Expect = 4.4e-27, Sum P(2) = 4.4e-27
Identities = 18/52 (34%), Positives = 33/52 (63%)
Query: 317 CAELKELPLDCNHG-LEQKIIIKGQEHWWNE-LQWDDLSTQNAFLPCFESLY 366
C +L++LPLD G + +K +++ +E W E ++W D +T+ FLP + +Y
Sbjct: 838 CPKLRKLPLDSKTGTVGKKFVLQYKETEWIESVEWKDEATKLHFLPSTKLVY 889
>TAIR|locus:2036214 [details] [associations]
symbol:AT1G15890 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006952 "defense response"
evidence=IEA;ISS] [GO:0043531 "ADP binding" evidence=IEA]
InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931 PRINTS:PR00364
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0006952
GO:GO:0043531 EMBL:AC034256 HOGENOM:HOG000238348 IPI:IPI00541891
IPI:IPI01020217 PIR:D86293 RefSeq:NP_173041.1 UniGene:At.49885
ProteinModelPortal:Q9LMP6 SMR:Q9LMP6 PRIDE:Q9LMP6 GeneID:838159
KEGG:ath:AT1G15890 TAIR:At1g15890 eggNOG:NOG324056
InParanoid:Q9LMP6 OMA:RAHLLMD Genevestigator:Q9LMP6
GermOnline:AT1G15890 Uniprot:Q9LMP6
Length = 851
Score = 296 (109.3 bits), Expect = 4.3e-25, P = 4.3e-25
Identities = 101/296 (34%), Positives = 142/296 (47%)
Query: 1 MTLRIASTINKEKENFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCPRLRT 60
M L IAS K+KE V GV L P W+ RMSLM N I N++ P L T
Sbjct: 480 MALWIASNFGKQKETLCVKPGVQLCHIPKDINWESLRRMSLMCNQIANISSSSNSPNLST 539
Query: 61 LFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLP 120
L L +N L +S +FF M +L VL LS N SL +LP I L SLQ++++S TGI LP
Sbjct: 540 LLLQNNKLVHISCDFFRFMPALVVLDLSRNSSLSSLPEAISKLGSLQYINLSTTGIKWLP 599
Query: 121 IELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRALRMFECGFNVELEADSILFGDSXX 180
+ K L L LNLE+T L I + + L L+ L++F ++ S++ +
Sbjct: 600 VSFKELKKLIHLNLEFTDELESIVG-IATSLPNLQVLKLFSSRVCID---GSLM--EELL 653
Query: 181 XXXXXXXXXXXXXXTITLQSFGALQRLLSYCRLGSISTQCLCLRHLNNSNSLSVFAFASL 240
+ L+S + RL+S S Q LCLR N S + + +L
Sbjct: 654 LLEHLKVLTATIKDALILESIQGVDRLVS-------SIQALCLR--NMSAPVIILNTVAL 704
Query: 241 RHLRTLQLYFNDLEELKID-----AGELKRIREICGFHSLQKVFYKILKIEA-RDM 290
L+ L++ + + E+KID GELK GF L V +I +E RD+
Sbjct: 705 GGLQHLEIVGSKISEIKIDWERKGRGELK-CTSSPGFKHLSVV--EIFNLEGPRDL 757
>TAIR|locus:2034770 [details] [associations]
symbol:SUMM2 "AT1G12280" species:3702 "Arabidopsis
thaliana" [GO:0006952 "defense response" evidence=IGI;ISS]
[GO:0043531 "ADP binding" evidence=IEA] InterPro:IPR000767
InterPro:IPR002182 Pfam:PF00931 PRINTS:PR00364 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0006952 GO:GO:0043531
EMBL:AC025416 HOGENOM:HOG000238348 IPI:IPI00530385
RefSeq:NP_172692.1 UniGene:At.42083 ProteinModelPortal:P60838
SMR:P60838 PaxDb:P60838 PRIDE:P60838 EnsemblPlants:AT1G12280.1
GeneID:837782 KEGG:ath:AT1G12280 TAIR:At1g12280 eggNOG:NOG247334
InParanoid:P60838 OMA:AMASKRT PhylomeDB:P60838
ProtClustDB:CLSN2682239 Genevestigator:P60838 GermOnline:AT1G12280
Uniprot:P60838
Length = 894
Score = 295 (108.9 bits), Expect = 6.0e-25, P = 6.0e-25
Identities = 72/169 (42%), Positives = 98/169 (57%)
Query: 1 MTLRIASTINKEKENFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCPRLRT 60
M L IAS + + KE +V GVGL E P + W RMSLM+N I+ L+ P C L T
Sbjct: 483 MALWIASDLGEHKERCIVQVGVGLREVPKVKNWSSVRRMSLMENEIEILSGSPECLELTT 542
Query: 61 LFLPSNH-LGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTL 119
LFL N L +S+ FF + L VL LS N SL LP I LVSL++LD+SWT I L
Sbjct: 543 LFLQKNDSLLHISDEFFRCIPMLVVLDLSGNSSLRKLPNQISKLVSLRYLDLSWTYIKRL 602
Query: 120 PIELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRALRMFECGFNVEL 168
P+ L+ L L+ L L+Y RL I IS++ LR L++ + ++++
Sbjct: 603 PVGLQELKKLRYLRLDYMKRLKSISG--ISNISSLRKLQLLQSKMSLDM 649
Score = 125 (49.1 bits), Expect = 0.00016, P = 0.00016
Identities = 68/295 (23%), Positives = 133/295 (45%)
Query: 79 MASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGIT---TLPIELKYLVNLKCLNLE 135
+ LR L L Y + L+++ GI N+ SL+ L + + ++ +L EL+ L +L+ LN+
Sbjct: 609 LKKLRYLRLDYMKRLKSIS-GISNISSLRKLQLLQSKMSLDMSLVEELQLLEHLEVLNIS 667
Query: 136 YTFRLSRIPQQVISDLKMLRALRMFECGFNVELEADSILFGDSXXXXXXXXXXXXXXXXT 195
I ++ + K+L A R+ +C L+ +L G
Sbjct: 668 -------IKSSLVVE-KLLNAPRLVKC-----LQI-LVLRGVQEESSGVLTLPDMDNLNK 713
Query: 196 ITLQSFGALQRLLSYCRLGSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDLEE 255
+ ++ G + + L S + + L+N +++ + + L+ L L L+ +L
Sbjct: 714 VIIRKCGMCEIKIERKTLSLSSNRSPKTQFLHNLSTVHISSCDGLKDLTWL-LFAPNLTS 772
Query: 256 LKIDAGELKRIREICGFHSLQKV-----FYKILKIEARDMACTCSQYQACPRGLTKFEEH 310
L++ EL + I + F K+ + ++A S Y P +
Sbjct: 773 LEVLDSEL--VEGIINQEKAMTMSGIIPFQKLESLRLHNLAMLRSIYWQ-PLSFPCLKTI 829
Query: 311 PLKRLECAELKELPLDCNHGL-EQKIIIKGQEHWWNE-LQWDDLSTQNAFLPCFE 363
+ + C EL++LPLD + +++++IK QE W E ++WD+ +T+ FLP F+
Sbjct: 830 HITK--CPELRKLPLDSEIAIRDEELVIKYQEEEWLERVEWDNEATRLRFLPFFK 882
>TAIR|locus:2031356 [details] [associations]
symbol:AT1G63360 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006952 "defense response"
evidence=IEA;ISS] [GO:0043531 "ADP binding" evidence=IEA]
InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931 PRINTS:PR00364
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0006952
GO:GO:0043531 EMBL:AC022355 EMBL:AC008047 eggNOG:NOG277177
HOGENOM:HOG000238348 ProtClustDB:CLSN2682331 IPI:IPI00530317
PIR:F96659 RefSeq:NP_176525.1 UniGene:At.66085
ProteinModelPortal:Q9SH22 SMR:Q9SH22 PaxDb:Q9SH22 PRIDE:Q9SH22
EnsemblPlants:AT1G63360.1 GeneID:842642 KEGG:ath:AT1G63360
TAIR:At1g63360 InParanoid:Q9SH22 OMA:ARDETIN PhylomeDB:Q9SH22
Genevestigator:Q9SH22 GermOnline:AT1G63360 Uniprot:Q9SH22
Length = 884
Score = 276 (102.2 bits), Expect = 6.4e-23, P = 6.4e-23
Identities = 96/267 (35%), Positives = 129/267 (48%)
Query: 1 MTLRIASTINKEKENFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCPRLRT 60
M L IAS + +KE F+V AGVG+ E P I W RMSLM+N I +L C L T
Sbjct: 482 MALWIASELGIQKEAFIVRAGVGVREIPKIKNWNVVRRMSLMENKIHHLVGSYECMELTT 541
Query: 61 LFLPSNHLG-------TVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISW 113
L L G T+S+ FF+ M L VL LS+N+SL LP I NLVSL++L++ +
Sbjct: 542 LLLGKREYGSIRSQLKTISSEFFNCMPKLAVLDLSHNKSLFELPEEISNLVSLKYLNLLY 601
Query: 114 TGITTLPIELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRALRMFECGFNVELEADSI 173
T I+ LP ++ L + LNLEYT +L I IS L L+ L++F +L
Sbjct: 602 TEISHLPKGIQELKKIIHLNLEYTRKLESITG--ISSLHNLKVLKLFRSRLPWDLNTVKE 659
Query: 174 LFGDSXXXXXXXXXXXXXXXXTITLQSFGALQRLLSYCRLGSI--STQCLCLRHLNNSNS 231
L + F + RLLS+ RL I S+ RHL S
Sbjct: 660 L-------ETLEHLEILTTTIDPRAKQFLSSHRLLSHSRLLEIYGSSVSSLNRHLE---S 709
Query: 232 LSVFAFASLRHLRTLQLYFNDLEELKI 258
LSV S LR Q+ + E+K+
Sbjct: 710 LSV----STDKLREFQIKSCSISEIKM 732
Score = 128 (50.1 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 81/326 (24%), Positives = 132/326 (40%)
Query: 50 TEIPTC-PRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQH 108
+E C P+L L L N ++ SL+ L L Y + +LP GI L + H
Sbjct: 561 SEFFNCMPKLAVLDLSHNKSLFELPEEISNLVSLKYLNLLYTE-ISHLPKGIQELKKIIH 619
Query: 109 LDISWTGITTLPIELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRALRMFEC-GFNVE 167
L++ +T + L NLK L L FR SR+P ++ +K L L E ++
Sbjct: 620 LNLEYTRKLESITGISSLHNLKVLKL---FR-SRLPWD-LNTVKELETLEHLEILTTTID 674
Query: 168 LEADSILFGDSXXXXXXXXXXXXXXXXTIT--LQSFGALQRLLSYCRLGSISTQCLCLRH 225
A L ++ L+S L ++ S S + +
Sbjct: 675 PRAKQFLSSHRLLSHSRLLEIYGSSVSSLNRHLESLSVSTDKLREFQIKSCSISEIKMGG 734
Query: 226 LNNSNSL---SVFAFASLRHLRTLQLYFNDLEELKI-DAGELKRI---REIC-GFHSLQK 277
+ N SL ++F LR L T ++ + L + A +L+ I + C G S
Sbjct: 735 ICNFLSLVDVNIFNCEGLREL-TFLIFAPKIRSLSVWHAKDLEDIINEEKACEGEESGIL 793
Query: 278 VFYKILKIEARDMACTCSQYQACPRGLTKFEEHPLKRLECAELKELPLDCNHGL--EQKI 335
F ++ + D+ Y P EE ++ EC L++LPLD G E
Sbjct: 794 PFPELNFLTLHDLPKLKKIYWR-PLPFLCLEEINIR--ECPNLRKLPLDSTSGKQGENGC 850
Query: 336 IIKGQE-HWWNELQWDDLSTQNAFLP 360
II+ ++ W+ ++W D +T+ FLP
Sbjct: 851 IIRNKDSRWFEGVKWADEATKKRFLP 876
>TAIR|locus:2031366 [details] [associations]
symbol:AT1G63350 "AT1G63350" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0006952
"defense response" evidence=IEA;ISS] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931
PRINTS:PR00364 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005524 GO:GO:0006952 GO:GO:0043531 EMBL:AC022355
eggNOG:NOG12793 HOGENOM:HOG000238348 ProtClustDB:CLSN2682331
IPI:IPI00516706 PIR:E96659 RefSeq:NP_176524.1 UniGene:At.66084
ProteinModelPortal:Q9C8T9 SMR:Q9C8T9 PaxDb:Q9C8T9 PRIDE:Q9C8T9
EnsemblPlants:AT1G63350.1 GeneID:842641 KEGG:ath:AT1G63350
TAIR:At1g63350 InParanoid:Q9C8T9 OMA:ITHREME PhylomeDB:Q9C8T9
ArrayExpress:Q9C8T9 Genevestigator:Q9C8T9 GermOnline:AT1G63350
Uniprot:Q9C8T9
Length = 898
Score = 267 (99.0 bits), Expect = 6.0e-22, P = 6.0e-22
Identities = 71/156 (45%), Positives = 90/156 (57%)
Query: 1 MTLRIASTINKEKENFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCPRLRT 60
M L IAS + K+ E F+V A VGL E + W RMSLM+N I +L C L T
Sbjct: 482 MALWIASDLGKQNEAFIVRASVGLREILKVENWNVVRRMSLMKNNIAHLDGRLDCMELTT 541
Query: 61 LFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLP 120
L L S HL +S+ FF+SM L VL LS N L LP GI LVSLQ+L++S TGI LP
Sbjct: 542 LLLQSTHLEKISSEFFNSMPKLAVLDLSGNYYLSELPNGISELVSLQYLNLSSTGIRHLP 601
Query: 121 IELKYLVNLKCLNLEYTFRL-SRIPQQVISDLKMLR 155
L+ L L L LE T +L S + + +LK+L+
Sbjct: 602 KGLQELKKLIHLYLERTSQLGSMVGISCLHNLKVLK 637
Score = 122 (48.0 bits), Expect = 0.00035, P = 0.00035
Identities = 76/344 (22%), Positives = 139/344 (40%)
Query: 35 ETTRMSLMQNAIQNLTE--IPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRS 92
E T + L ++ ++ + P+L L L N+ + N + SL+ L LS +
Sbjct: 538 ELTTLLLQSTHLEKISSEFFNSMPKLAVLDLSGNYYLSELPNGISELVSLQYLNLS-STG 596
Query: 93 LENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLE---YTFRLSRIPQ-QVI 148
+ +LP G+ L L HL + T + + L NLK L L Y + L + + + +
Sbjct: 597 IRHLPKGLQELKKLIHLYLERTSQLGSMVGISCLHNLKVLKLSGSSYAWDLDTVKELEAL 656
Query: 149 SDLKMLRALRMFECGFNVELEADSI-LFGDSXXXXXXXXXXXXXXXXTITLQ-SFGALQR 206
L++L + +C + S L I+L + LQ
Sbjct: 657 EHLEVLTTT-IDDCTLGTDQFLSSHRLMSCIRFLKISNNSNRNRNSSRISLPVTMDRLQE 715
Query: 207 L-LSYCRLGSISTQCLCLRHLNNSNSLSVFAFASLRHLR--TLQLYFNDLEELKI-DAGE 262
+ +C I +C + +SL ++ R LR T ++ +L+ L + + +
Sbjct: 716 FTIEHCHTSEIKMGRIC-----SFSSLIEVNLSNCRRLRELTFLMFAPNLKRLHVVSSNQ 770
Query: 263 LKRIREICGFHSLQKV----FYKILKIEARDMACTCSQYQACPRGLTKFEEHPLKRLECA 318
L+ I H +K F K+ ++ ++ + Y + P E+ + + C
Sbjct: 771 LEDIINKEKAHDGEKSGIVPFPKLNELHLYNLRELKNIYWS-PLPFPCLEK--INVMGCP 827
Query: 319 ELKELPLDCN---HGLEQKIIIKGQEHWWNELQWDDLSTQNAFL 359
LK+LPLD HG II + W ++W+D +T+ FL
Sbjct: 828 NLKKLPLDSKSGKHGGNGLIITHREMEWITRVEWEDEATKTRFL 871
>TAIR|locus:2005517 [details] [associations]
symbol:RPS2 "RESISTANT TO P. SYRINGAE 2" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006952 "defense response" evidence=ISS;TAS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0009626 "plant-type
hypersensitive response" evidence=IMP] [GO:0016045 "detection of
bacterium" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0042742 "defense response to bacterium" evidence=RCA;IMP]
[GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009595 "detection of
biotic stimulus" evidence=RCA] [GO:0009617 "response to bacterium"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
acid mediated signaling pathway" evidence=RCA] [GO:0009863
"salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010200 "response to
chitin" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0043900 "regulation of multi-organism process" evidence=RCA]
[GO:0045087 "innate immune response" evidence=RCA] [GO:0050776
"regulation of immune response" evidence=RCA] [GO:0050832 "defense
response to fungus" evidence=RCA] [GO:0051707 "response to other
organism" evidence=RCA] InterPro:IPR000767 InterPro:IPR002182
InterPro:IPR003593 Pfam:PF00931 PRINTS:PR00364 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0016045
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161564 GO:GO:0042742
eggNOG:COG4886 GO:GO:0043531 EMBL:AL049483 GO:GO:0009626
GO:GO:0017111 UniGene:At.46720 UniGene:At.69675 EMBL:U14158
EMBL:U12860 EMBL:AF368301 EMBL:AF487797 EMBL:AF487798 EMBL:AF487799
EMBL:AF487800 EMBL:AF487801 EMBL:AF487802 EMBL:AF487803
EMBL:AF487804 EMBL:AF487805 EMBL:AF487806 EMBL:AF487807
EMBL:AF487808 EMBL:AF487809 EMBL:AF487810 EMBL:AF487811
EMBL:AF487812 EMBL:AF487813 EMBL:AF487814 EMBL:AF487815
EMBL:AF487816 EMBL:AF487817 EMBL:AF487818 EMBL:AF487819
EMBL:AF487820 EMBL:AF487821 EMBL:AF487822 EMBL:AF487823
EMBL:AK117214 EMBL:BT005972 EMBL:U97217 IPI:IPI00547830 PIR:A54809
RefSeq:NP_194339.1 UniGene:At.75226 PDB:2FT5 PDBsum:2FT5
ProteinModelPortal:Q42484 SMR:Q42484 DIP:DIP-53465N IntAct:Q42484
STRING:Q42484 EnsemblPlants:AT4G26090.1 GeneID:828715
KEGG:ath:AT4G26090 TAIR:At4g26090 InParanoid:Q42484 KO:K13459
OMA:AFNNDLE PhylomeDB:Q42484 ProtClustDB:CLSN2685902
Genevestigator:Q42484 GermOnline:AT4G26090 Uniprot:Q42484
Length = 909
Score = 260 (96.6 bits), Expect = 3.5e-21, P = 3.5e-21
Identities = 108/343 (31%), Positives = 156/343 (45%)
Query: 3 LRIASTINKEKENFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCPRLRTLF 62
L +AS KE LV +G TEAP W++ +SL+ N IQ L E CP+L TL
Sbjct: 480 LWMASEQGTYKELILVEPSMGHTEAPKAENWRQALVISLLDNRIQTLPEKLICPKLTTLM 539
Query: 63 LPSNH-LGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLPI 121
L N L + FF M LRVL LS+ S+ +PL I LV L HL +S T I+ LP
Sbjct: 540 LQQNSSLKKIPTGFFMHMPVLRVLDLSFT-SITEIPLSIKYLVELYHLSMSGTKISVLPQ 598
Query: 122 ELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRALRMFECGFNVELEADSILFGDSXXX 181
EL L LK L+L+ T L IP+ I L L L ++ EL++ FG+
Sbjct: 599 ELGNLRKLKHLDLQRTQFLQTIPRDAICWLSKLEVLNLYYSYAGWELQS----FGEDEAE 654
Query: 182 XXXXXXXXXXXXXT---ITLQSFGALQRLLSYCRLGSISTQCLCLRHLNNSNSLSVFAFA 238
T IT+ S L+ L + G++ L H+ N L F
Sbjct: 655 ELGFADLEYLENLTTLGITVLSLETLKTLFEF---GALHKHIQHL-HVEECNELLYFNLP 710
Query: 239 SL----RHLRTLQLYF-NDLEELKIDA---GELKRIREICGFHSLQ---KVFYKILKIEA 287
SL R+LR L + +DLE L A + E+ HSL +V+ + +
Sbjct: 711 SLTNHGRNLRRLSIKSCHDLEYLVTPADFENDWLPSLEVLTLHSLHNLTRVWGNSVSQDC 770
Query: 288 -RDMACT----CSQYQ--ACPRGLTKFEEHPLKRLECAELKEL 323
R++ C C++ + + + L K E ++ +C E++EL
Sbjct: 771 LRNIRCINISHCNKLKNVSWVQKLPKLEV--IELFDCREIEEL 811
>TAIR|locus:2171589 [details] [associations]
symbol:AT5G47260 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0006952 "defense response"
evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0045036
"protein targeting to chloroplast" evidence=RCA] InterPro:IPR000767
InterPro:IPR002182 InterPro:IPR003593 InterPro:IPR006703
Pfam:PF00931 Pfam:PF04548 PRINTS:PR00364 SMART:SM00382
GO:GO:0005525 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0006952 GO:GO:0043531 GO:GO:0017111 EMBL:AB018117
HOGENOM:HOG000238348 eggNOG:KOG4658 IPI:IPI00527968
RefSeq:NP_199537.2 UniGene:At.55416 ProteinModelPortal:Q9LVT3
SMR:Q9LVT3 PaxDb:Q9LVT3 PRIDE:Q9LVT3 EnsemblPlants:AT5G47260.1
GeneID:834773 KEGG:ath:AT5G47260 TAIR:At5g47260 InParanoid:Q9LVT3
OMA:CNILEIT PhylomeDB:Q9LVT3 Genevestigator:Q9LVT3
GermOnline:AT5G47260 Uniprot:Q9LVT3
Length = 948
Score = 253 (94.1 bits), Expect = 3.8e-21, Sum P(2) = 3.8e-21
Identities = 82/236 (34%), Positives = 118/236 (50%)
Query: 14 ENFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCPRLRTL-FLPSNHLGTVS 72
E+F+V+ G + + ++ W+ RMS+ IQN+++ P C L TL F + HL +S
Sbjct: 477 EHFVVVGGERIHQMLNVNDWRMIRRMSVTSTQIQNISDSPQCSELTTLVFRRNRHLKWIS 536
Query: 73 NNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCL 132
FF M L VL LS+NR L LP + +LV L+ L++SWT I LP+ LK L +L L
Sbjct: 537 GAFFQWMTGLVVLDLSFNRELAELPEEVSSLVLLRFLNLSWTCIKGLPLGLKELKSLIHL 596
Query: 133 NLEYTFRLSRIPQQVISDLKMLRALRMFECGFNVELEADSILFGDSXXXXXXXXXXXXXX 192
+L+YT L + VI+ L L+ LR+F + D L D
Sbjct: 597 DLDYTSNLQEV--DVIASLLNLQVLRLFH-----SVSMDLKLMED-------IQLLKSLK 642
Query: 193 XXTITLQSFGALQRLLSYCRLGSISTQCLCLRHLN--NSNSLSVFAFASLRHLRTL 246
++T++ LQRLLS RL S S + L L + LS+ A SL L L
Sbjct: 643 ELSLTVRGSSVLQRLLSIQRLAS-SIRRLHLTETTIVDGGILSLNAIFSLCELDIL 697
Score = 49 (22.3 bits), Expect = 3.8e-21, Sum P(2) = 3.8e-21
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 317 CAELKELPLDCNHGLEQKIIIKGQEHWWNELQWDDLSTQNAF 358
C EL+ LP + + ++ +E ++W+D +T+ F
Sbjct: 813 CPELRRLPFNSESTIGNQVETIIEEQVIKIVEWEDEATKQRF 854
>TAIR|locus:2203881 [details] [associations]
symbol:AT1G62630 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006952 "defense response"
evidence=IEA;ISS] [GO:0043531 "ADP binding" evidence=IEA]
InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931 PRINTS:PR00364
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0006952
GO:GO:0043531 EMBL:AC007190 InterPro:IPR025875 Pfam:PF12799
EMBL:AC005698 EMBL:U97220 IPI:IPI00529535 PIR:H96651
RefSeq:NP_176451.1 UniGene:At.52327 ProteinModelPortal:Q9SI85
SMR:Q9SI85 PaxDb:Q9SI85 PRIDE:Q9SI85 EnsemblPlants:AT1G62630.1
GeneID:842560 KEGG:ath:AT1G62630 TAIR:At1g62630 eggNOG:NOG277177
HOGENOM:HOG000238348 InParanoid:Q9SI85 OMA:WKHLMED PhylomeDB:Q9SI85
ProtClustDB:CLSN2682331 Genevestigator:Q9SI85 GermOnline:AT1G62630
Uniprot:Q9SI85
Length = 893
Score = 257 (95.5 bits), Expect = 7.0e-21, P = 7.0e-21
Identities = 70/169 (41%), Positives = 94/169 (55%)
Query: 1 MTLRIASTINKEKENFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCPRLRT 60
M L IAS + +KE F+V AGVG+ E P + W RMSLM N I +L C L T
Sbjct: 482 MALWIASELGIQKEAFIVRAGVGVREIPKVKNWNVVRRMSLMGNKIHHLVGSYECMELTT 541
Query: 61 LFLPSNHLG---------TVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDI 111
L L G T+S+ FF+ M L VL LS+N+SL LP I NLVSL++L++
Sbjct: 542 LLLGEGEYGSIWRWSEIKTISSEFFNCMPKLAVLDLSHNQSLFELPEEISNLVSLKYLNL 601
Query: 112 SWTGITTLPIELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRALRMF 160
S TGI L ++ L + LNLE+T +L I IS L L+ L+++
Sbjct: 602 SHTGIRHLSKGIQELKKIIHLNLEHTSKLESIDG--ISSLHNLKVLKLY 648
>TAIR|locus:2170892 [details] [associations]
symbol:AT5G43730 species:3702 "Arabidopsis thaliana"
[GO:0006952 "defense response" evidence=IEA;ISS] [GO:0043531 "ADP
binding" evidence=IEA] InterPro:IPR000767 InterPro:IPR002182
Pfam:PF00931 PRINTS:PR00364 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006952 GO:GO:0043531 EMBL:AB026651
HOGENOM:HOG000238348 EMBL:AK230460 IPI:IPI00531375
RefSeq:NP_199186.1 UniGene:At.55343 ProteinModelPortal:Q9FG91
SMR:Q9FG91 EnsemblPlants:AT5G43730.1 GeneID:834393
KEGG:ath:AT5G43730 TAIR:At5g43730 eggNOG:NOG306904
InParanoid:Q9FG91 PhylomeDB:Q9FG91 ProtClustDB:CLSN2679401
Genevestigator:Q9FG91 GermOnline:AT5G43730 Uniprot:Q9FG91
Length = 848
Score = 255 (94.8 bits), Expect = 4.2e-20, P = 4.2e-20
Identities = 87/259 (33%), Positives = 126/259 (48%)
Query: 1 MTLRIASTINKEKENFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCPRLRT 60
M L I S ++E V +G + P+ W+ +MSL+ ++ + P CP L T
Sbjct: 478 MALWINSDFGNQQETICVKSGAHVRLIPNDISWEIVRQMSLISTQVEKIACSPNCPNLST 537
Query: 61 LFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLP 120
L LP N L +S FF M L VL LS N SL LP I NL SLQ+L++S TGI +LP
Sbjct: 538 LLLPYNKLVDISVGFFLFMPKLVVLDLSTNWSLIELPEEISNLGSLQYLNLSLTGIKSLP 597
Query: 121 IELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRALRMFECGFNVELEADSILFGDSXX 180
+ LK L L LNLE+T L + + + L L+ L++F F V D I+ +
Sbjct: 598 VGLKKLRKLIYLNLEFTNVLESLVG-IATTLPNLQVLKLFYSLFCV----DDIIMEE--- 649
Query: 181 XXXXXXXXXXXXXXTITLQSFGALQRLLSYCRLGSISTQCLCLRHLNNSNSLSVFAFASL 240
T T++ L+R+ RL S S + LCLR N S + +L
Sbjct: 650 ----LQRLKHLKILTATIEDAMILERVQGVDRLAS-SIRGLCLR--NMSAPRVILNSVAL 702
Query: 241 RHLRTLQLYFNDLEELKID 259
L+ L + ++ E++ID
Sbjct: 703 GGLQQLGIVSCNISEIEID 721
>TAIR|locus:2201996 [details] [associations]
symbol:RPS5 "AT1G12220" species:3702 "Arabidopsis
thaliana" [GO:0009626 "plant-type hypersensitive response"
evidence=IMP] [GO:0006952 "defense response" evidence=IMP;TAS]
[GO:0009816 "defense response to bacterium, incompatible
interaction" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008219 "cell death" evidence=IMP] [GO:0038023 "signaling
receptor activity" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IMP] [GO:0005622 "intracellular" evidence=ISS]
InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931 PRINTS:PR00364
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005524
GO:GO:0000166 GO:GO:0043531 GO:GO:0005622 GO:GO:0009626
GO:GO:0009816 HOGENOM:HOG000238348 ProtClustDB:CLSN2682239
EMBL:AC022522 EMBL:AF074916 EMBL:BT010583 EMBL:U97219 EMBL:U97221
EMBL:AF039379 IPI:IPI00518586 PIR:C86257 RefSeq:NP_001184970.1
RefSeq:NP_172686.1 UniGene:At.42084 ProteinModelPortal:O64973
SMR:O64973 EnsemblPlants:AT1G12220.1 EnsemblPlants:AT1G12220.2
GeneID:837775 KEGG:ath:AT1G12220 TAIR:At1g12220 eggNOG:NOG264264
InParanoid:O64973 KO:K13460 OMA:GRERNIN PhylomeDB:O64973
Genevestigator:O64973 GO:GO:0038023 Uniprot:O64973
Length = 889
Score = 252 (93.8 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 66/157 (42%), Positives = 87/157 (55%)
Query: 1 MTLRIASTINKEKENFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCPRLRT 60
M L I+S + K+KE +V AGVGL E P + W ++SLM N I+ + + C L T
Sbjct: 484 MALWISSDLGKQKEKCIVRAGVGLREVPKVKDWNTVRKISLMNNEIEEIFDSHECAALTT 543
Query: 61 LFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLP 120
LFL N + +S FF M L VL LS N+SL LP I L SL++ ++S+T I LP
Sbjct: 544 LFLQKNDVVKISAEFFRCMPHLVVLDLSENQSLNELPEEISELASLRYFNLSYTCIHQLP 603
Query: 121 IELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRAL 157
+ L L L LNLE+ L I IS+L LR L
Sbjct: 604 VGLWTLKKLIHLNLEHMSSLGSILG--ISNLWNLRTL 638
Score = 157 (60.3 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 80/345 (23%), Positives = 142/345 (41%)
Query: 37 TRMSLMQNAIQNLT-EIPTC-PRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLE 94
T + L +N + ++ E C P L L L N +ASLR LSY +
Sbjct: 542 TTLFLQKNDVVKISAEFFRCMPHLVVLDLSENQSLNELPEEISELASLRYFNLSYT-CIH 600
Query: 95 NLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYTFRLSRIPQQVISDLKML 154
LP+G++ L L HL++ + + L NL+ L L + RL + ++ +L++L
Sbjct: 601 QLPVGLWTLKKLIHLNLEHMSSLGSILGISNLWNLRTLGLRDS-RLL-LDMSLVKELQLL 658
Query: 155 RALRMFECGFNVELEADSILFGDSXXXXXXXXXXXXXXXXTI---TLQSFGALQRL-LSY 210
L + + L A+ +L ++ TL + G L++L +
Sbjct: 659 EHLEVITLDISSSLVAEPLLCSQRLVECIKEVDFKYLKEESVRVLTLPTMGNLRKLGIKR 718
Query: 211 CRLGSISTQCLCLRHLNNSN-------SLSVFAFASLRHLRTLQ--LYFNDLEELKIDAG 261
C + I + N + +LS A L+ L L+ +L L++ G
Sbjct: 719 CGMREIKIERTTSSSSRNKSPTTPCFSNLSRVFIAKCHGLKDLTWLLFAPNLTFLEV--G 776
Query: 262 ELKRIREICGFHSLQKVFYKILKIEARDMACTCSQYQACPRGLTKFEEHP-LKRL---EC 317
K + +I ++ I+ + + + R K P LK + +C
Sbjct: 777 FSKEVEDIISEEKAEEHSATIVPFRKLE-TLHLFELRGLKRIYAKALHFPCLKVIHVEKC 835
Query: 318 AELKELPLDCNHGL--EQKIIIKGQEHWWNELQWDDLSTQNAFLP 360
+L++LPLD G+ E+ +I G+ W ++W+D +TQ FLP
Sbjct: 836 EKLRKLPLDSKSGIAGEELVIYYGEREWIERVEWEDQATQLRFLP 880
>TAIR|locus:2171579 [details] [associations]
symbol:AT5G47250 species:3702 "Arabidopsis thaliana"
[GO:0006952 "defense response" evidence=IEA;ISS] [GO:0043531 "ADP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR001611 InterPro:IPR000767 InterPro:IPR002182
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS51450 GO:GO:0005739
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006952
GO:GO:0043531 EMBL:AB018117 HOGENOM:HOG000238348 EMBL:AK226756
IPI:IPI00528509 RefSeq:NP_199536.1 UniGene:At.29906
ProteinModelPortal:Q9LVT4 SMR:Q9LVT4 PRIDE:Q9LVT4
EnsemblPlants:AT5G47250.1 GeneID:834772 KEGG:ath:AT5G47250
TAIR:At5g47250 eggNOG:NOG270919 InParanoid:Q9LVT4 PhylomeDB:Q9LVT4
Genevestigator:Q9LVT4 GermOnline:AT5G47250 Uniprot:Q9LVT4
Length = 843
Score = 232 (86.7 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 64/163 (39%), Positives = 90/163 (55%)
Query: 1 MTLRIASTINKEKENFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCP---R 57
M L I S ++ E ++V GL++ P + W T+MSL N I+N+ + P P
Sbjct: 477 MALWIVSEF-RDGERYVVKTDAGLSQLPDVTDWTTVTKMSLFNNEIKNIPDDPEFPDQTN 535
Query: 58 LRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGIT 117
L TLFL +N L + FF M++L VL LS+N + LP GI LVSL+ L++S T I
Sbjct: 536 LVTLFLQNNRLVDIVGKFFLVMSTLVVLDLSWNFQITELPKGISALVSLRLLNLSGTSIK 595
Query: 118 TLPIELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRALRMF 160
LP L L L LNLE T L + +IS+L+ L+ LR +
Sbjct: 596 HLPEGLGVLSKLIHLNLESTSNLRSVG--LISELQKLQVLRFY 636
>TAIR|locus:2170902 [details] [associations]
symbol:AT5G43740 species:3702 "Arabidopsis thaliana"
[GO:0006952 "defense response" evidence=IEA;ISS] [GO:0043531 "ADP
binding" evidence=IEA] InterPro:IPR000767 InterPro:IPR002182
Pfam:PF00931 PRINTS:PR00364 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006952 GO:GO:0043531 EMBL:AB026651
HOGENOM:HOG000238348 eggNOG:NOG306904 ProtClustDB:CLSN2679401
EMBL:AY050380 EMBL:BT000491 IPI:IPI00540113 RefSeq:NP_199187.1
RefSeq:NP_851126.1 UniGene:At.26584 ProteinModelPortal:Q9FG90
SMR:Q9FG90 PaxDb:Q9FG90 PRIDE:Q9FG90 EnsemblPlants:AT5G43740.1
EnsemblPlants:AT5G43740.2 GeneID:834394 KEGG:ath:AT5G43740
TAIR:At5g43740 InParanoid:Q9FG90 OMA:CNISEIR PhylomeDB:Q9FG90
Genevestigator:Q9FG90 GermOnline:AT5G43740 Uniprot:Q9FG90
Length = 862
Score = 230 (86.0 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 89/272 (32%), Positives = 123/272 (45%)
Query: 1 MTLRIASTINKEKENFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCPRLRT 60
M L I S K++E V +G + P+ W+ MS I+ ++ CP L T
Sbjct: 477 MALWINSDFGKQQETICVKSGAHVRMIPNDINWEIVRTMSFTCTQIKKISCRSKCPNLST 536
Query: 61 LFLPSNHLGT-VSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTL 119
L + N L +SN FF M L VL LS N L LP I NL SLQ+L+IS TGI +L
Sbjct: 537 LLILDNRLLVKISNRFFRFMPKLVVLDLSANLDLIKLPEEISNLGSLQYLNISLTGIKSL 596
Query: 120 PIELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRALRMF-ECGFNVELEADSILFGDS 178
P+ LK L L LNLE+T + + + L L+ L+ F C + D IL +
Sbjct: 597 PVGLKKLRKLIYLNLEFTGVHGSLVG-IAATLPNLQVLKFFYSCVY-----VDDILMKEL 650
Query: 179 XXXXXXXXXXXXXXXXTITLQSFGALQRLLSYCRLGSISTQCLCLRHLNNSNS-LSVFAF 237
TI L+R+ RL S S + LCL ++ LS A
Sbjct: 651 QDLEHLKILTANVKDVTI-------LERIQGDDRLAS-SIRSLCLEDMSTPRVILSTIAL 702
Query: 238 ASLRHLRTLQLYFNDLEELKIDAGELKRIREI 269
L+ L L ++ E++ID E K RE+
Sbjct: 703 GGLQQLAILMC---NISEIRID-WESKERREL 730
>MGI|MGI:3045226 [details] [associations]
symbol:Tlr11 "toll-like receptor 11" species:10090 "Mus
musculus" [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0009617
"response to bacterium" evidence=IMP] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045087 "innate immune response" evidence=IEA]
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR027194
Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450 MGI:MGI:3045226
GO:GO:0016021 GO:GO:0007165 GO:GO:0009617 GO:GO:0006954
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0045087
GO:GO:0005622 GeneTree:ENSGT00700000104185 SUPFAM:SSF52200
EMBL:AY510704 IPI:IPI00409846 RefSeq:NP_991388.2 UniGene:Mm.291512
ProteinModelPortal:Q6R5P0 SMR:Q6R5P0 STRING:Q6R5P0 PRIDE:Q6R5P0
Ensembl:ENSMUST00000063570 GeneID:239081 UCSC:uc007tkz.1 CTD:239081
HOGENOM:HOG000236285 HOVERGEN:HBG080130 InParanoid:Q6R5P0
OMA:ELRLATY OrthoDB:EOG473PQT NextBio:383971 Bgee:Q6R5P0
CleanEx:MM_TLR11 Genevestigator:Q6R5P0
GermOnline:ENSMUSG00000051969 PANTHER:PTHR24365:SF68 Uniprot:Q6R5P0
Length = 926
Score = 153 (58.9 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 49/150 (32%), Positives = 77/150 (51%)
Query: 15 NFLVLAGVGLTEAP-SIGMWKETTRMSLMQNAIQNLTE---IPTCPRLRTLFLPSNHLGT 70
+FL L G G+ + P S+ + E + L +N IQN+ E IP L L L NHL T
Sbjct: 267 HFLSLVGTGIEKVPASLTGYSELRALDLGKNQIQNILENGEIPGYKALEFLSLHDNHLQT 326
Query: 71 VSNNFFHSMASLRVLILSYNR--SLENLPLGIFNLVSLQHLDISWTGITTLPI-ELKYLV 127
+ F H++ L+ L LS N+ + LP G+F+ +L+ LD+S+ + +P L L
Sbjct: 327 LPTRFLHTLPQLQKLNLSMNKLGPILELPEGLFS-TNLKVLDLSYNQLCDVPHGALSLLS 385
Query: 128 NLKCLNLEYTFRLSRIPQQVISDLKMLRAL 157
L+ L L +S + + + L+ LR L
Sbjct: 386 QLQELWLSGN-NISSLSNESLQGLRQLRTL 414
Score = 59 (25.8 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 219 QCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDLEELKIDA 260
Q L L HLN N LSV +F SL+ L+ L FN L++++
Sbjct: 609 QVLALSHLNLRN-LSVSSFKSLQDLKLL--LFNSERALEMNS 647
>TAIR|locus:2136447 [details] [associations]
symbol:AT4G27190 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0006952 "defense response"
evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000767 InterPro:IPR002182
InterPro:IPR003593 Pfam:PF00931 PRINTS:PR00364 PROSITE:PS51450
SMART:SM00382 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006952 EMBL:AL035680 EMBL:AL161566 GO:GO:0043531
GO:GO:0017111 eggNOG:KOG4658 EMBL:DQ446871 IPI:IPI00536711
PIR:T06049 RefSeq:NP_194449.1 UniGene:At.65425
ProteinModelPortal:Q9T048 SMR:Q9T048 PRIDE:Q9T048
EnsemblPlants:AT4G27190.1 GeneID:828827 KEGG:ath:AT4G27190
TAIR:At4g27190 HOGENOM:HOG000091014 InParanoid:Q9T048 OMA:WIMSSSQ
PhylomeDB:Q9T048 ProtClustDB:CLSN2686073 Genevestigator:Q9T048
Uniprot:Q9T048
Length = 985
Score = 101 (40.6 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 43/153 (28%), Positives = 73/153 (47%)
Query: 10 NKEKENFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPT--CPRLRTLFLPSNH 67
+++ + LV++G GL + + R+SLM N +++L ++ C + L L N
Sbjct: 477 SQDDSHSLVMSGTGLQDIRQDKLAPSLRRVSLMNNKLESLPDLVEEFCVKTSVLLLQGNF 536
Query: 68 L-GTVSNNFFHSMASLRVLILSYNRSLENLP-LGIFNLVSLQHLDI-SWTGITTLPIELK 124
L V F + +LR+L LS R +++ P + L SL L + + LP L+
Sbjct: 537 LLKEVPIGFLQAFPTLRILNLSGTR-IKSFPSCSLLRLFSLHSLFLRDCFKLVKLP-SLE 594
Query: 125 YLVNLKCLNLEYTFRLSRIPQQVISDLKMLRAL 157
L L+ L+L T L P+ + +LK R L
Sbjct: 595 TLAKLELLDLCGTHILE-FPRG-LEELKRFRHL 625
Score = 100 (40.3 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 40/145 (27%), Positives = 61/145 (42%)
Query: 225 HLN-NSNSLSVFAFASLRHLRTLQ-----LYFNDLEELKID-AGELKRIREICGFHSLQK 277
HL +L + R LRTL L +LEE++I L+ + E +H
Sbjct: 830 HLGLKLETLKIIEITMCRKLRTLLDKRNFLTIPNLEEIEISYCDSLQNLHEALLYHQPFV 889
Query: 278 VFYKILKIEARDMACTCSQYQACPRGLTKFEEHPLKRLECAELKELPLDCNHGLEQKIII 337
++LK+ R++ S C G ++ + C +L LP+ G +KI
Sbjct: 890 PNLRVLKL--RNLPNLVS---ICNWGEVWECLEQVEVIHCNQLNCLPISSTCGRIKKI-- 942
Query: 338 KGQEHWWNELQWDDLSTQNAFLPCF 362
KG+ WW L+WDD S P F
Sbjct: 943 KGELSWWERLEWDDPSALTTVQPFF 967
Score = 93 (37.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 33/117 (28%), Positives = 50/117 (42%)
Query: 56 PRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTG 115
P LR L L + + + + SL L L L LP + L L+ LD+ T
Sbjct: 550 PTLRILNLSGTRIKSFPSCSLLRLFSLHSLFLRDCFKLVKLP-SLETLAKLELLDLCGTH 608
Query: 116 ITTLPIELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRALRMFECGFNVELEADS 172
I P L+ L + L+L T L IP +V+S L L L M + ++ ++
Sbjct: 609 ILEFPRGLEELKRFRHLDLSRTLHLESIPARVVSRLSSLETLDMTSSHYRWSVQGET 665
>TAIR|locus:2131689 [details] [associations]
symbol:AT4G27220 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006952 "defense response"
evidence=IEA;ISS] [GO:0043531 "ADP binding" evidence=IEA]
InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931 PRINTS:PR00364
GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006952
EMBL:AL161566 eggNOG:COG4886 GO:GO:0043531 HOGENOM:HOG000091014
ProtClustDB:CLSN2686073 EMBL:AL030978 EMBL:DQ446872 IPI:IPI00548786
PIR:T05746 RefSeq:NP_194452.1 UniGene:At.65426
ProteinModelPortal:O81825 SMR:O81825 PRIDE:O81825
EnsemblPlants:AT4G27220.1 GeneID:828830 KEGG:ath:AT4G27220
TAIR:At4g27220 InParanoid:O81825 OMA:LAINIMA PhylomeDB:O81825
ArrayExpress:O81825 Genevestigator:O81825 Uniprot:O81825
Length = 919
Score = 128 (50.1 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 43/130 (33%), Positives = 67/130 (51%)
Query: 35 ETTRMSLMQNAIQNLTEIPT-----CPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSY 89
ET + L N+ ++ E+P P LR L L + T+ ++F ++ SLR L+L
Sbjct: 494 ETLVLLLQGNS--HVKEVPNGFLQAFPNLRILDLSGVRIRTLPDSF-SNLHSLRSLVLRN 550
Query: 90 NRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYTFRLSRIPQQVIS 149
+ L NLP + +LV LQ LD+ + I LP L+ L +L+ + + T++L IP I
Sbjct: 551 CKKLRNLP-SLESLVKLQFLDLHESAIRELPRGLEALSSLRYICVSNTYQLQSIPAGTIL 609
Query: 150 DLKMLRALRM 159
L L L M
Sbjct: 610 QLSSLEVLDM 619
Score = 123 (48.4 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 47/153 (30%), Positives = 76/153 (49%)
Query: 9 INKEKENF--LVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTE--IPTCPRLRTLFLP 64
++ + E F LV+AG GL E P R+SLM N ++ L I L L
Sbjct: 443 MSSQGEGFHSLVMAGRGLIEFPQDKFVSSVQRVSLMANKLERLPNNVIEGVETLVLLLQG 502
Query: 65 SNHLGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDI-SWTGITTLPIEL 123
++H+ V N F + +LR+L LS R + LP NL SL+ L + + + LP L
Sbjct: 503 NSHVKEVPNGFLQAFPNLRILDLSGVR-IRTLPDSFSNLHSLRSLVLRNCKKLRNLP-SL 560
Query: 124 KYLVNLKCLNLEYTFRLSRIPQ--QVISDLKML 154
+ LV L+ L+L + + +P+ + +S L+ +
Sbjct: 561 ESLVKLQFLDLHES-AIRELPRGLEALSSLRYI 592
Score = 69 (29.3 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 36/118 (30%), Positives = 54/118 (45%)
Query: 231 SLSVFAFASLRHLRTLQL-YFNDLEELKIDAGELKRIREICGFHSLQKVFYKILKIEA-R 288
S+ F SL QL F +LEEL +D L+ I E+ GF ++ K+L++ R
Sbjct: 747 SIHYFPSLSLASGCESQLDLFPNLEELSLDNVNLESIGELNGFLGMRLQKLKLLQVSGCR 806
Query: 289 DMACTCSQYQACPRGLTKFEEHPLKRLECAELKEL------PLD-CNHGLEQKI-IIK 338
+ S Q L +E +K + C L+EL P+D C L K+ +IK
Sbjct: 807 QLKRLFSD-QILAGTLPNLQE--IKVVSCLRLEELFNFSSVPVDFCAESLLPKLTVIK 861
>UNIPROTKB|E1BWI3 [details] [associations]
symbol:RSU1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007265 "Ras protein signal transduction" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 GO:GO:0007265 InterPro:IPR003591
SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00660000095190 EMBL:AADN02000655 IPI:IPI00819606
Ensembl:ENSGALT00000014189 ArrayExpress:E1BWI3 Uniprot:E1BWI3
Length = 204
Score = 130 (50.8 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 47/146 (32%), Positives = 75/146 (51%)
Query: 17 LVLAGVGLTEAPS-IGMWKETTRMSLMQNAIQNL-TEIPTCPRLRTLFLPSNHLGTVSNN 74
LVL+ LT P+ I + ++ N I+ L T+I + +L+ L L N L T+
Sbjct: 45 LVLSHNKLTTVPANIADLRNIEVLNFFNNQIEELPTQISSLQKLKHLNLGMNRLNTLPRG 104
Query: 75 FFHSMASLRVLILSYNRSLEN-LPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLN 133
F S+ +L VL L+YN EN LP F L +L+ L +S LP ++ L L+ L+
Sbjct: 105 F-GSLPALEVLDLTYNNLNENSLPGNFFYLTTLRALYLSDNDFEILPPDIGKLTKLQILS 163
Query: 134 LEYTFRLSRIPQQVISDLKMLRALRM 159
L +S +P++ I +L L+ L +
Sbjct: 164 LRDNDLIS-LPKE-IGELTQLKELHI 187
Score = 112 (44.5 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 38/137 (27%), Positives = 61/137 (44%)
Query: 34 KETTRMSLMQNAIQNLTEIP---TCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYN 90
K + + I N+ ++P T + L L N L TV N + ++ VL +N
Sbjct: 15 KNQPEVDMCDRGISNMLDVPGLFTLSHITQLVLSHNKLTTVPANIA-DLRNIEVLNF-FN 72
Query: 91 RSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYT-FRLSRIPQQVIS 149
+E LP I +L L+HL++ + TLP L L+ L+L Y + +P
Sbjct: 73 NQIEELPTQISSLQKLKHLNLGMNRLNTLPRGFGSLPALEVLDLTYNNLNENSLPGNFFY 132
Query: 150 DLKMLRALRMFECGFNV 166
L LRAL + + F +
Sbjct: 133 -LTTLRALYLSDNDFEI 148
Score = 49 (22.3 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 240 LRHLRTLQLYFNDLEELKIDAGELKRIREI 269
L L+ L L NDL L + GEL +++E+
Sbjct: 156 LTKLQILSLRDNDLISLPKEIGELTQLKEL 185
>ZFIN|ZDB-GENE-010306-4 [details] [associations]
symbol:slit3 "slit (Drosophila) homolog 3"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 ZFIN:ZDB-GENE-010306-4 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0030517 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 Pfam:PF02210
Pfam:PF12661 InterPro:IPR026906 Pfam:PF13306 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AL928691 EMBL:BX323583
IPI:IPI00502606 Ensembl:ENSDART00000146299 ArrayExpress:F1RCV3
Bgee:F1RCV3 Uniprot:F1RCV3
Length = 1516
Score = 137 (53.3 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 46/157 (29%), Positives = 80/157 (50%)
Query: 23 GLTEAPSIGMWKETTRMSLMQNAIQNLTE--IPTCPRLRTLFLPSNHLGTVSNNFFHSMA 80
GLTE P+ + + + L QN I+N+ T +L+ + L N + ++ + F +
Sbjct: 289 GLTEIPA-NLPEGIVEIRLEQNMIKNIPAGAFSTYKKLKRIDLSKNQISEIAEDAFSGLR 347
Query: 81 SLRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIE-LKYLVNLKCLNLEYTF 138
SL L+L Y + +P G+F+ LVSLQ L ++ I L + K L NL L+L Y
Sbjct: 348 SLTSLVL-YGNKIAEIPKGLFDGLVSLQLLLLNANKINCLRVNTFKDLQNLNLLSL-YDN 405
Query: 139 RLSRIPQQVISDLKMLRALRM----FECGFNVELEAD 171
+L I + + + L+ ++ L + F C +++ AD
Sbjct: 406 KLQTISKGLFAPLRAIKTLHLAQNPFMCDCHLKWLAD 442
Score = 55 (24.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 208 LSYCRLGSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDL 253
L++ + ++T L L + N + V AF LR LR L L+ NDL
Sbjct: 786 LTFSNMTQLAT--LILSY-NQIRCVPVHAFDGLRSLRLLTLHGNDL 828
>UNIPROTKB|Q5E9C0 [details] [associations]
symbol:RSU1 "Ras suppressor protein 1" species:9913 "Bos
taurus" [GO:0007265 "Ras protein signal transduction" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 GO:GO:0007265
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 HSSP:P07359 HOGENOM:HOG000116557
GeneTree:ENSGT00660000095190 EMBL:BT021000 EMBL:BC102118
IPI:IPI00700672 RefSeq:NP_001035691.1 UniGene:Bt.65606
ProteinModelPortal:Q5E9C0 PRIDE:Q5E9C0 Ensembl:ENSBTAT00000039415
GeneID:617534 KEGG:bta:617534 CTD:6251 HOVERGEN:HBG002478
InParanoid:Q5E9C0 OMA:MSNITRL OrthoDB:EOG4HX51M NextBio:20900715
Uniprot:Q5E9C0
Length = 277
Score = 134 (52.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 48/146 (32%), Positives = 75/146 (51%)
Query: 17 LVLAGVGLTEAP-SIGMWKETTRMSLMQNAIQNL-TEIPTCPRLRTLFLPSNHLGTVSNN 74
LVL+ LT P +I K ++ N I+ L T+I + +L+ L L N L T+
Sbjct: 45 LVLSHNKLTTVPPNIAELKNLEVLNFFNNQIEELPTQISSLQKLKHLNLGMNRLNTLPRG 104
Query: 75 FFHSMASLRVLILSYNRSLEN-LPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLN 133
F S+ +L VL L+YN EN LP F L +L+ L +S LP ++ L L+ L+
Sbjct: 105 F-GSLPALEVLDLTYNNLNENSLPGNFFYLTTLRALYLSDNDFEILPPDIGKLTKLQILS 163
Query: 134 LEYTFRLSRIPQQVISDLKMLRALRM 159
L +S +P++ I +L L+ L +
Sbjct: 164 LRDNDLIS-LPKE-IGELTQLKELHI 187
Score = 111 (44.1 bits), Expect = 0.00096, P = 0.00096
Identities = 53/180 (29%), Positives = 83/180 (46%)
Query: 5 IASTINKEKENFLVLAGVGLTEAPS-IGMWKETTRMSLMQNAIQNLTE-IPTCPRLRTLF 62
IA N E NF + E P+ I ++ ++L N + L + P L L
Sbjct: 59 IAELKNLEVLNFF---NNQIEELPTQISSLQKLKHLNLGMNRLNTLPRGFGSLPALEVLD 115
Query: 63 LPSNHLG--TVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLP 120
L N+L ++ NFF+ + +LR L LS N E LP I L LQ L + + +LP
Sbjct: 116 LTYNNLNENSLPGNFFY-LTTLRALYLSDN-DFEILPPDIGKLTKLQILSLRDNDLISLP 173
Query: 121 IELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRALRMFECGFN--VELEADSILFGDS 178
E+ L LK L+++ RL+ +P + + +L + ++F+ N V AD G S
Sbjct: 174 KEIGELTQLKELHIQGN-RLTVLPPE-LGNLDLTGQKQIFKAENNPWVTPIADQFQLGVS 231
Score = 106 (42.4 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 39/137 (28%), Positives = 60/137 (43%)
Query: 34 KETTRMSLMQNAIQNLTEIP---TCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYN 90
K + + I N+ +I T + L L N L TV N + +L VL +N
Sbjct: 15 KNQPEVDMSDRGISNMLDINGLFTLSHITQLVLSHNKLTTVPPNIAE-LKNLEVLNF-FN 72
Query: 91 RSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYT-FRLSRIPQQVIS 149
+E LP I +L L+HL++ + TLP L L+ L+L Y + +P
Sbjct: 73 NQIEELPTQISSLQKLKHLNLGMNRLNTLPRGFGSLPALEVLDLTYNNLNENSLPGNFFY 132
Query: 150 DLKMLRALRMFECGFNV 166
L LRAL + + F +
Sbjct: 133 -LTTLRALYLSDNDFEI 148
Score = 49 (22.3 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 240 LRHLRTLQLYFNDLEELKIDAGELKRIREI 269
L L+ L L NDL L + GEL +++E+
Sbjct: 156 LTKLQILSLRDNDLISLPKEIGELTQLKEL 185
>UNIPROTKB|E2R9R1 [details] [associations]
symbol:RSU1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007265 "Ras protein signal transduction"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0007265 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GeneTree:ENSGT00660000095190 CTD:6251 OMA:MSNITRL
EMBL:AAEX03001249 EMBL:AAEX03001250 RefSeq:XP_535177.1
ProteinModelPortal:E2R9R1 Ensembl:ENSCAFT00000007396 GeneID:477993
KEGG:cfa:477993 NextBio:20853383 Uniprot:E2R9R1
Length = 277
Score = 134 (52.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 48/146 (32%), Positives = 75/146 (51%)
Query: 17 LVLAGVGLTEAP-SIGMWKETTRMSLMQNAIQNL-TEIPTCPRLRTLFLPSNHLGTVSNN 74
LVL+ LT P +I K ++ N I+ L T+I + +L+ L L N L T+
Sbjct: 45 LVLSHNKLTTVPPNIAELKNLEVLNFFNNQIEELPTQISSLQKLKHLNLGMNRLNTLPRG 104
Query: 75 FFHSMASLRVLILSYNRSLEN-LPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLN 133
F S+ +L VL L+YN EN LP F L +L+ L +S LP ++ L L+ L+
Sbjct: 105 F-GSLPALEVLDLTYNNLNENSLPGNFFYLTTLRALYLSDNDFEILPPDIGKLTKLQILS 163
Query: 134 LEYTFRLSRIPQQVISDLKMLRALRM 159
L +S +P++ I +L L+ L +
Sbjct: 164 LRDNDLIS-LPKE-IGELTQLKELHI 187
Score = 111 (44.1 bits), Expect = 0.00096, P = 0.00096
Identities = 53/180 (29%), Positives = 83/180 (46%)
Query: 5 IASTINKEKENFLVLAGVGLTEAPS-IGMWKETTRMSLMQNAIQNLTE-IPTCPRLRTLF 62
IA N E NF + E P+ I ++ ++L N + L + P L L
Sbjct: 59 IAELKNLEVLNFF---NNQIEELPTQISSLQKLKHLNLGMNRLNTLPRGFGSLPALEVLD 115
Query: 63 LPSNHLG--TVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLP 120
L N+L ++ NFF+ + +LR L LS N E LP I L LQ L + + +LP
Sbjct: 116 LTYNNLNENSLPGNFFY-LTTLRALYLSDN-DFEILPPDIGKLTKLQILSLRDNDLISLP 173
Query: 121 IELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRALRMFECGFN--VELEADSILFGDS 178
E+ L LK L+++ RL+ +P + + +L + ++F+ N V AD G S
Sbjct: 174 KEIGELTQLKELHIQGN-RLTVLPPE-LGNLDLTGQKQVFKAENNPWVTPIADQFQLGVS 231
Score = 101 (40.6 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 37/137 (27%), Positives = 60/137 (43%)
Query: 34 KETTRMSLMQNAIQNLTEIP---TCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYN 90
K + + I N+ ++ + + L L N L TV N + +L VL +N
Sbjct: 15 KNQPEVDMSDRGISNMLDVNGLFSLSHITQLVLSHNKLTTVPPNIAE-LKNLEVLNF-FN 72
Query: 91 RSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYT-FRLSRIPQQVIS 149
+E LP I +L L+HL++ + TLP L L+ L+L Y + +P
Sbjct: 73 NQIEELPTQISSLQKLKHLNLGMNRLNTLPRGFGSLPALEVLDLTYNNLNENSLPGNFFY 132
Query: 150 DLKMLRALRMFECGFNV 166
L LRAL + + F +
Sbjct: 133 -LTTLRALYLSDNDFEI 148
Score = 49 (22.3 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 240 LRHLRTLQLYFNDLEELKIDAGELKRIREI 269
L L+ L L NDL L + GEL +++E+
Sbjct: 156 LTKLQILSLRDNDLISLPKEIGELTQLKEL 185
>UNIPROTKB|Q15404 [details] [associations]
symbol:RSU1 "Ras suppressor protein 1" species:9606 "Homo
sapiens" [GO:0007265 "Ras protein signal transduction"
evidence=IEA] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0034329 "cell junction
assembly" evidence=TAS] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005829 GO:GO:0007265 GO:GO:0007165
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 EMBL:CH471072
Reactome:REACT_111155 GO:GO:0034329 InterPro:IPR025875 Pfam:PF12799
EMBL:AL365215 HOGENOM:HOG000116557 CTD:6251 HOVERGEN:HBG002478
OMA:MSNITRL OrthoDB:EOG4HX51M EMBL:L12535 EMBL:AK292911
EMBL:AK312520 EMBL:CR536521 EMBL:CR541840 EMBL:EF445013
EMBL:AC073367 EMBL:BC005993 EMBL:BC008691 EMBL:BC015644
IPI:IPI00017256 PIR:I60122 RefSeq:NP_036557.1 RefSeq:NP_689937.2
UniGene:Hs.524161 ProteinModelPortal:Q15404 SMR:Q15404
IntAct:Q15404 STRING:Q15404 PhosphoSite:Q15404 DMDM:2498866
OGP:Q15404 PaxDb:Q15404 PRIDE:Q15404 DNASU:6251
Ensembl:ENST00000345264 Ensembl:ENST00000377911
Ensembl:ENST00000377921 GeneID:6251 KEGG:hsa:6251 UCSC:uc001iok.3
GeneCards:GC10M016672 HGNC:HGNC:10464 HPA:HPA025927 MIM:179555
neXtProt:NX_Q15404 PharmGKB:PA34876 PhylomeDB:Q15404 ChiTaRS:RSU1
GenomeRNAi:6251 NextBio:24271 ArrayExpress:Q15404 Bgee:Q15404
CleanEx:HS_RSU1 Genevestigator:Q15404 GermOnline:ENSG00000148484
Uniprot:Q15404
Length = 277
Score = 134 (52.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 48/146 (32%), Positives = 75/146 (51%)
Query: 17 LVLAGVGLTEAP-SIGMWKETTRMSLMQNAIQNL-TEIPTCPRLRTLFLPSNHLGTVSNN 74
LVL+ LT P +I K ++ N I+ L T+I + +L+ L L N L T+
Sbjct: 45 LVLSHNKLTMVPPNIAELKNLEVLNFFNNQIEELPTQISSLQKLKHLNLGMNRLNTLPRG 104
Query: 75 FFHSMASLRVLILSYNRSLEN-LPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLN 133
F S+ +L VL L+YN EN LP F L +L+ L +S LP ++ L L+ L+
Sbjct: 105 F-GSLPALEVLDLTYNNLSENSLPGNFFYLTTLRALYLSDNDFEILPPDIGKLTKLQILS 163
Query: 134 LEYTFRLSRIPQQVISDLKMLRALRM 159
L +S +P++ I +L L+ L +
Sbjct: 164 LRDNDLIS-LPKE-IGELTQLKELHI 187
Score = 111 (44.1 bits), Expect = 0.00096, P = 0.00096
Identities = 53/180 (29%), Positives = 83/180 (46%)
Query: 5 IASTINKEKENFLVLAGVGLTEAPS-IGMWKETTRMSLMQNAIQNLTE-IPTCPRLRTLF 62
IA N E NF + E P+ I ++ ++L N + L + P L L
Sbjct: 59 IAELKNLEVLNFF---NNQIEELPTQISSLQKLKHLNLGMNRLNTLPRGFGSLPALEVLD 115
Query: 63 LPSNHLG--TVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLP 120
L N+L ++ NFF+ + +LR L LS N E LP I L LQ L + + +LP
Sbjct: 116 LTYNNLSENSLPGNFFY-LTTLRALYLSDN-DFEILPPDIGKLTKLQILSLRDNDLISLP 173
Query: 121 IELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRALRMFECGFN--VELEADSILFGDS 178
E+ L LK L+++ RL+ +P + + +L + ++F+ N V AD G S
Sbjct: 174 KEIGELTQLKELHIQGN-RLTVLPPE-LGNLDLTGQKQVFKAENNPWVTPIADQFQLGVS 231
>MGI|MGI:1914394 [details] [associations]
symbol:Lrrc40 "leucine rich repeat containing 40"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1914394 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104287 CTD:55631 HOGENOM:HOG000005761
HOVERGEN:HBG081930 OrthoDB:EOG4M65HK InterPro:IPR015766
PANTHER:PTHR23155:SF28 EMBL:AK011726 EMBL:AK017814 EMBL:AK034978
EMBL:AK163288 IPI:IPI00470138 RefSeq:NP_077156.2 UniGene:Mm.358704
ProteinModelPortal:Q9CRC8 SMR:Q9CRC8 STRING:Q9CRC8
PhosphoSite:Q9CRC8 PaxDb:Q9CRC8 PRIDE:Q9CRC8
Ensembl:ENSMUST00000072080 GeneID:67144 KEGG:mmu:67144
UCSC:uc008rvu.1 InParanoid:Q9CRC8 NextBio:323714 Bgee:Q9CRC8
CleanEx:MM_LRRC40 Genevestigator:Q9CRC8
GermOnline:ENSMUSG00000063052 Uniprot:Q9CRC8
Length = 602
Score = 124 (48.7 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 42/136 (30%), Positives = 67/136 (49%)
Query: 25 TEAPSIGMWKETTRMSLMQNAIQNLTEIPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRV 84
T P +G + + L +N ++ L E P+C +L+ L L N + + + ++ V
Sbjct: 234 TVPPDVGSMESLELLYLRRNKLRVLPEFPSCRQLKELHLAENQIEKLGAEHLQHLQAILV 293
Query: 85 LILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLE----YTFRL 140
L L N+ L ++P + L SL+ LD+S I++LP L L +LK L LE T R
Sbjct: 294 LDLRGNK-LRSVPEEMALLQSLERLDLSNNDISSLPCSLGNL-HLKFLALEGNPLRTIRR 351
Query: 141 SRIPQQVISDLKMLRA 156
I + LK LR+
Sbjct: 352 EIIAKGTQEVLKYLRS 367
Score = 117 (46.2 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 42/142 (29%), Positives = 71/142 (50%)
Query: 23 GLTEAPSI--GMWKETTRMSLMQNAIQNLTEIPTCPRLRTLFLP---SNHLGTVSNNFFH 77
G PS+ G+ K + A +NL E+P C + +P + +L S +
Sbjct: 20 GKDRGPSVPQGLLKAARSSGQLNLAGRNLGEVPQCVWRINVDIPEEANQNLSFSSTERWW 79
Query: 78 SMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYT 137
L LI+S N+ L++L + L +L LDI +T+LP ++ L NL+ LN+ +
Sbjct: 80 DQTDLTKLIISSNK-LQSLSDDLRLLPALTVLDIHDNQLTSLPSAIRELDNLQKLNVSHN 138
Query: 138 FRLSRIPQQVISDLKMLRALRM 159
+L +P+++ S LK LR L +
Sbjct: 139 -KLKILPEEITS-LKNLRTLHL 158
Score = 111 (44.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 43/134 (32%), Positives = 70/134 (52%)
Query: 17 LVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPT-----CPRLRTLFLPSNHLGTV 71
L LAG L E P +W+ + + + A QNL+ T L L + SN L ++
Sbjct: 41 LNLAGRNLGEVPQC-VWR--INVDIPEEANQNLSFSSTERWWDQTDLTKLIISSNKLQSL 97
Query: 72 SNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKC 131
S++ + +L VL + N+ L +LP I L +LQ L++S + LP E+ L NL+
Sbjct: 98 SDDL-RLLPALTVLDIHDNQ-LTSLPSAIRELDNLQKLNVSHNKLKILPEEITSLKNLRT 155
Query: 132 LNLEYTFRLSRIPQ 145
L+L++ L+ IP+
Sbjct: 156 LHLQHN-ELTCIPE 168
Score = 66 (28.3 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 36/125 (28%), Positives = 55/125 (44%)
Query: 222 CLRHLN-NSNSLSVFA--FASLRHLRTLQLYFNDLEELKIDAGELKRIREI-CGFHSLQK 277
CL L+ +SN L+ FA L L L L N L+ L + +KR++ + C + L+
Sbjct: 175 CLEDLDLSSNRLATVPADFALLSSLLRLNLSSNQLKNLPAEISRMKRLKHLDCDANLLET 234
Query: 278 VFYKILKIEARDMACTCSQYQACPRGLTKFEEHPLKRLECAELKELPLDCNHGLEQKIII 337
V + +E+ ++ Y + L E P C +LKEL H E +I
Sbjct: 235 VPPDVGSMESLELL-----YLRRNK-LRVLPEFP----SCRQLKEL-----HLAENQIEK 279
Query: 338 KGQEH 342
G EH
Sbjct: 280 LGAEH 284
Score = 44 (20.5 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 216 ISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDLEELKIDAGELKRIREI 269
IST L N S+ + +L TL L NDL ++ + G ++R +
Sbjct: 517 ISTLEAVLISNNQVGSVDPQKMKLMENLNTLDLQNNDLLQIPPELGNCVQLRTL 570
Score = 38 (18.4 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 18/64 (28%), Positives = 29/64 (45%)
Query: 230 NSLSVFA--FASLRHLRTLQLYFNDLEELKIDAGELKRIREI-CGFHSLQ---KVFYKIL 283
N LS + L+ L L L N L L + L +++ I F+ + +V Y+I
Sbjct: 459 NKLSFISHELCLLQKLTFLDLRNNFLSSLPEEMSSLTKLQTINLSFNRFKVFPEVLYRIS 518
Query: 284 KIEA 287
+EA
Sbjct: 519 TLEA 522
Score = 37 (18.1 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 319 ELKELPLDCNHGLEQKIIIKGQEHWWNELQWDDLSTQNAFL 359
ELKE+ LD N + I + +L + DL +N FL
Sbjct: 446 ELKEMVLDINLSFNKLSFISHELCLLQKLTFLDL--RNNFL 484
>MGI|MGI:1927197 [details] [associations]
symbol:Shoc2 "soc-2 (suppressor of clear) homolog (C.
elegans)" species:10090 "Mus musculus" [GO:0000164 "protein
phosphatase type 1 complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0019903
"protein phosphatase binding" evidence=ISO] [GO:0046579 "positive
regulation of Ras protein signal transduction" evidence=ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450
EMBL:AF068921 MGI:MGI:1927197 GO:GO:0005634 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HOGENOM:HOG000116557
GeneTree:ENSGT00600000084236 CTD:8036 HOVERGEN:HBG055661
OMA:LPHGIGN OrthoDB:EOG408N7W PANTHER:PTHR23155:SF38 EMBL:DQ479926
EMBL:AK077798 EMBL:AK146447 EMBL:BC013722 EMBL:BC049775
EMBL:BC083060 IPI:IPI00131754 RefSeq:NP_001161977.1
RefSeq:NP_062632.2 UniGene:Mm.228669 ProteinModelPortal:O88520
SMR:O88520 IntAct:O88520 STRING:O88520 PhosphoSite:O88520
PaxDb:O88520 PRIDE:O88520 Ensembl:ENSMUST00000025932
Ensembl:ENSMUST00000169861 GeneID:56392 KEGG:mmu:56392
UCSC:uc008hxg.2 InParanoid:Q91VH8 NextBio:312492 Bgee:O88520
CleanEx:MM_SHOC2 Genevestigator:O88520
GermOnline:ENSMUSG00000024976 Uniprot:O88520
Length = 582
Score = 131 (51.2 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 62/233 (26%), Positives = 106/233 (45%)
Query: 28 PSIGMWKETTRMSLMQNAIQNL-TEIPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLI 86
PS+ + T + L N +Q+L E+ L TL L N L ++ ++ ++ LR+L
Sbjct: 117 PSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSL-DNLKKLRMLD 175
Query: 87 LSYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYTFRLSRIPQQ 146
L +N+ L +P ++ L SL L + + ITT+ ++K L L L++ ++ ++P +
Sbjct: 176 LRHNK-LREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLPKLSMLSIREN-KIKQLPAE 233
Query: 147 VISDLKMLRALRMFECGFNVELEADSILFGDSXXXXXXXXXXXXXXXXTITLQSFGALQR 206
I +L L L + N +LE G+ T+ + +L R
Sbjct: 234 -IGELCNLITL---DVAHN-QLEHLPKEIGNCTQITNLDLQHNDLLDLPDTIGNLSSLNR 288
Query: 207 L-LSYCRLGSIS---TQCLCLRHLN-NSNSLSVFA---FASLRHLRTLQLYFN 251
L L Y RL +I +C L LN +N++S +SL L +L L N
Sbjct: 289 LGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARN 341
Score = 49 (22.3 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 18/69 (26%), Positives = 35/69 (50%)
Query: 238 ASLRHLRTLQLYFNDLEELKIDAGELKRIREI-CGFHSLQKVFYKILKI-EARDMACTCS 295
+ L L L L N L++L G L+++RE+ + L+ + +I + + + + T +
Sbjct: 422 SGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNN 481
Query: 296 QYQACPRGL 304
Q PRG+
Sbjct: 482 QLSTLPRGI 490
>UNIPROTKB|F1P0K8 [details] [associations]
symbol:Gga.13956 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007165 "signal transduction" evidence=IEA]
Pfam:PF00560 InterPro:IPR000488 InterPro:IPR001611 PROSITE:PS50017
PROSITE:PS51450 GO:GO:0007165 InterPro:IPR003591 SMART:SM00369
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00700000104287
EMBL:AADN02000699 IPI:IPI00585441 ProteinModelPortal:F1P0K8
Ensembl:ENSGALT00000015265 OMA:CYLESAD Uniprot:F1P0K8
Length = 713
Score = 138 (53.6 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 95/371 (25%), Positives = 157/371 (42%)
Query: 2 TLRIASTINKEKENFLVLAGVGLTEAP-SIGMWKETTRMSLMQNAIQNLTE-IPTCPRLR 59
TLR+ +T+N L+L LT+ P I + + +++ N + L E +P ++
Sbjct: 36 TLRL-NTVNLTNLEILILERNRLTQLPPEISLLHKLKVLNVSHNRLSCLPEELPKLVNIK 94
Query: 60 TLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTL 119
LFL N++ + F ++ SL L L+ N+ L+ L + ++ +L+ L+I I+
Sbjct: 95 ELFLNHNNI----DEFPFALKSLETLELAGNK-LKTLSDTMVDMKNLKVLNIDSNQISIF 149
Query: 120 PIELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRALRMFECGFNVELEADSILFGDSX 179
P L YL NL L+L F + +P+ D+K L+ L+ F N +L S+
Sbjct: 150 PRVLCYLPNLVSLSLCENF-IQSLPK----DIKGLKKLQEFSVSHN-KLMFLSVQLFQLT 203
Query: 180 XXXXXXXXXXXXXXXTITLQSFGALQRL-LSYCRLGSISTQ-CLC--LRHLNN-SNSLSV 234
+ +++ L L LS +I+ C C L+HL N L+
Sbjct: 204 KLKRLRADDNKLEFLSDKVENLRELTFLNLSKNLFKTITDNLCNCTMLKHLILCDNQLTQ 263
Query: 235 FA--FASLRHLRTLQLYFNDLEELKIDAGELKRIREICGFHSLQKVFYKILKIEARDMAC 292
L+HL+ L L N L L LK + +I L + +E +
Sbjct: 264 LPANIDRLKHLKELSLSGNQLNSLDEQISHLKDLSKI----ELSGNVLTYIPVELK---- 315
Query: 293 TCSQYQACPRGLTKFEEHPLKRLECAELKELPLDCNHGLEQKII----IKGQEHWWNELQ 348
TC+Q K + P ++LK L L N + + I IK EH EL
Sbjct: 316 TCTQITKADLSNNKLSQFPYALCALSDLKYLNLSGN-SISELIPGISDIKDLEHL--ELN 372
Query: 349 WDDLSTQNAFL 359
+ LS+ +A L
Sbjct: 373 KNKLSSFSACL 383
>UNIPROTKB|Q50L44 [details] [associations]
symbol:LINGO1 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 1" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0048715 "negative
regulation of oligodendrocyte differentiation" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0043491 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 OrthoDB:EOG40S0F8
EMBL:AB195262 IPI:IPI00607536 RefSeq:NP_001019748.1
UniGene:Gga.13113 HSSP:Q05793 ProteinModelPortal:Q50L44 SMR:Q50L44
STRING:Q50L44 Ensembl:ENSGALT00000004272 GeneID:415344
KEGG:gga:415344 CTD:84894 HOVERGEN:HBG057546 InParanoid:Q50L44
OMA:RIRDRKP NextBio:20818967 ArrayExpress:Q50L44 Uniprot:Q50L44
Length = 613
Score = 137 (53.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 69/253 (27%), Positives = 114/253 (45%)
Query: 31 GMWKETTRMSLMQNAIQNLT--EIPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILS 88
G+ ET ++ L +N I+ L E P L L L N + + F+++ +LR L L
Sbjct: 61 GIPTETRQLDLGKNRIKTLNQDEFANYPHLEELELNENIISAIEPGAFNNLFNLRTLGLR 120
Query: 89 YNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIELKY--LVNLKCLNLEYTFRLSRIPQ 145
NR L+ +PLG+F L +L LDIS I L ++ + L NLK L + L I
Sbjct: 121 SNR-LKLIPLGVFTGLSNLTKLDISENKIVIL-LDYMFQDLYNLKSLEVGDN-DLVYISH 177
Query: 146 QVISDLKMLRALRMFECGF-NVELEADSILFGDSXXXXXXXXXXXXXXXXTITLQSFGAL 204
+ S L L L + +C ++ EA S L G L L
Sbjct: 178 RAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVL 237
Query: 205 QRLLSYCRLGSISTQCLCLRHLNNSN----SLSVFAFASLRHL---RTLQLYFNDLEELK 257
+ + + L ++++ CL +L + + +L+ + S+RHL R L L +N + ++
Sbjct: 238 E-ISHWPYLDTMTSNCLYGLNLTSLSITHCNLTSIPYVSVRHLVYLRFLNLSYNPIVTIE 296
Query: 258 IDA-GELKRIREI 269
+L R++EI
Sbjct: 297 GSMLHDLLRLQEI 309
>UNIPROTKB|Q8TF66 [details] [associations]
symbol:LRRC15 "Leucine-rich repeat-containing protein 15"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 EMBL:CH471052 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 EMBL:AC125362
EMBL:AC174158 EMBL:AB071037 EMBL:BC101064 EMBL:BC101065
EMBL:BK001325 IPI:IPI00152871 IPI:IPI00913924 RefSeq:NP_001128529.2
RefSeq:NP_570843.2 UniGene:Hs.288467 ProteinModelPortal:Q8TF66
SMR:Q8TF66 IntAct:Q8TF66 STRING:Q8TF66 PhosphoSite:Q8TF66
DMDM:30794642 PaxDb:Q8TF66 PeptideAtlas:Q8TF66 PRIDE:Q8TF66
Ensembl:ENST00000347624 Ensembl:ENST00000428839
Ensembl:ENST00000439944 GeneID:131578 KEGG:hsa:131578
UCSC:uc003ftt.3 UCSC:uc003ftu.3 CTD:131578 GeneCards:GC03M194075
H-InvDB:HIX0003982 HGNC:HGNC:20818 HPA:HPA035503 neXtProt:NX_Q8TF66
PharmGKB:PA134956867 HOGENOM:HOG000040004 HOVERGEN:HBG052343
InParanoid:Q8TF66 OMA:NHLEYIP OrthoDB:EOG4QVCCN ChiTaRS:LRRC15
GenomeRNAi:131578 NextBio:82942 Bgee:Q8TF66 CleanEx:HS_LRRC15
Genevestigator:Q8TF66 GermOnline:ENSG00000172061 Uniprot:Q8TF66
Length = 581
Score = 136 (52.9 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 39/137 (28%), Positives = 76/137 (55%)
Query: 28 PSIGMW-KETTRMSLMQNAIQNLTE--IPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRV 84
PS+ M + R++L N+++ L+ P LR L+L NH+ ++ +N F ++ L+V
Sbjct: 262 PSVFMQLPQLNRLTLFGNSLKELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQV 321
Query: 85 LILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIEL-KYLVNLKCLNLEYTFRLSR 142
LILS N+ + + G FN L L+ L + + L + + L NL+ ++L+ RL +
Sbjct: 322 LILSRNQ-ISFISPGAFNGLTELRELSLHTNALQDLDGNVFRMLANLQNISLQNN-RLRQ 379
Query: 143 IPQQVISDLKMLRALRM 159
+P + +++ L A+++
Sbjct: 380 LPGNIFANVNGLMAIQL 396
>ZFIN|ZDB-GENE-010306-3 [details] [associations]
symbol:slit2 "slit (Drosophila) homolog 2"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IMP] [GO:0033564
"anterior/posterior axon guidance" evidence=IMP] [GO:0007414
"axonal defasciculation" evidence=IMP] [GO:0001763 "morphogenesis
of a branching structure" evidence=IMP] [GO:0003262 "endocardial
progenitor cell migration to the midline involved in heart field
formation" evidence=IGI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-010306-3 GO:GO:0005576 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0030517 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 HSSP:P00740 Pfam:PF12661 GO:GO:0001763
GO:GO:0007414 Pfam:PF01463 GO:GO:0033564 HOGENOM:HOG000116120
HOVERGEN:HBG057959 CTD:9353 KO:K06839 OrthoDB:EOG4D7Z4T
GO:GO:0003262 EMBL:AF210321 EMBL:CU638813 IPI:IPI00491594
RefSeq:NP_571810.1 UniGene:Dr.10489 SMR:Q9DE36 IntAct:Q9DE36
GeneID:80353 KEGG:dre:80353 NextBio:20934061 Uniprot:Q9DE36
Length = 1512
Score = 143 (55.4 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 50/165 (30%), Positives = 85/165 (51%)
Query: 15 NFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCP--RLRTLFLPSNHLGTVS 72
N + G GLTE P+ + + T + L QN+I+ + P RLR + L +N + ++
Sbjct: 273 NVVDCRGKGLTEIPT-NLPETITEIRLEQNSIKIIPAGAFAPYKRLRRIDLSNNQITELA 331
Query: 73 NNFFHSMASLRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIE-LKYLVNLK 130
++ F + SL L+L Y + LP G+F+ L SLQ L ++ I L ++ + L NL
Sbjct: 332 SDSFQGLRSLNSLVL-YGNKITELPKGLFDGLFSLQLLLLNANKINCLRVDSFQDLQNLN 390
Query: 131 CLNLEYTFRLSRIPQQVISDLKMLRALRM----FECGFNVELEAD 171
L+L Y +L I + S L+ ++ L + F C +++ AD
Sbjct: 391 LLSL-YDNKLQTIAKGTFSSLRAIQTLHLAQNPFMCDCHLKWLAD 434
Score = 44 (20.5 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 209 SYCRLGSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDL 253
S+ + + T L L + N + AF L+ LR L L+ ND+
Sbjct: 779 SFSNMSELLT--LILSY-NRLRCIPAKAFDGLKSLRLLSLHGNDI 820
>UNIPROTKB|E1BS02 [details] [associations]
symbol:RSU1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007265 "Ras protein signal transduction" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 GO:GO:0007265 InterPro:IPR003591
SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00660000095190 CTD:6251 OMA:MSNITRL EMBL:AADN02000655
IPI:IPI00601204 RefSeq:NP_001186520.1 UniGene:Gga.34554
ProteinModelPortal:E1BS02 Ensembl:ENSGALT00000038283 GeneID:420524
KEGG:gga:420524 NextBio:20823420 ArrayExpress:E1BS02 Uniprot:E1BS02
Length = 277
Score = 130 (50.8 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 47/146 (32%), Positives = 75/146 (51%)
Query: 17 LVLAGVGLTEAPS-IGMWKETTRMSLMQNAIQNL-TEIPTCPRLRTLFLPSNHLGTVSNN 74
LVL+ LT P+ I + ++ N I+ L T+I + +L+ L L N L T+
Sbjct: 45 LVLSHNKLTTVPANIADLRNIEVLNFFNNQIEELPTQISSLQKLKHLNLGMNRLNTLPRG 104
Query: 75 FFHSMASLRVLILSYNRSLEN-LPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLN 133
F S+ +L VL L+YN EN LP F L +L+ L +S LP ++ L L+ L+
Sbjct: 105 F-GSLPALEVLDLTYNNLNENSLPGNFFYLTTLRALYLSDNDFEILPPDIGKLTKLQILS 163
Query: 134 LEYTFRLSRIPQQVISDLKMLRALRM 159
L +S +P++ I +L L+ L +
Sbjct: 164 LRDNDLIS-LPKE-IGELTQLKELHI 187
Score = 112 (44.5 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 38/137 (27%), Positives = 61/137 (44%)
Query: 34 KETTRMSLMQNAIQNLTEIP---TCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYN 90
K + + I N+ ++P T + L L N L TV N + ++ VL +N
Sbjct: 15 KNQPEVDMCDRGISNMLDVPGLFTLSHITQLVLSHNKLTTVPANIA-DLRNIEVLNF-FN 72
Query: 91 RSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYT-FRLSRIPQQVIS 149
+E LP I +L L+HL++ + TLP L L+ L+L Y + +P
Sbjct: 73 NQIEELPTQISSLQKLKHLNLGMNRLNTLPRGFGSLPALEVLDLTYNNLNENSLPGNFFY 132
Query: 150 DLKMLRALRMFECGFNV 166
L LRAL + + F +
Sbjct: 133 -LTTLRALYLSDNDFEI 148
Score = 49 (22.3 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 240 LRHLRTLQLYFNDLEELKIDAGELKRIREI 269
L L+ L L NDL L + GEL +++E+
Sbjct: 156 LTKLQILSLRDNDLISLPKEIGELTQLKEL 185
>UNIPROTKB|D6RAP2 [details] [associations]
symbol:TLR1 "Toll-like receptor 1" species:9606 "Homo
sapiens" [GO:0002755 "MyD88-dependent toll-like receptor signaling
pathway" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0006954 "inflammatory
response" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0034150 "toll-like receptor 6 signaling pathway"
evidence=IEA] [GO:0042088 "T-helper 1 type immune response"
evidence=IEA] [GO:0042496 "detection of diacyl bacterial
lipopeptide" evidence=IEA] [GO:0050707 "regulation of cytokine
secretion" evidence=IEA] [GO:0042535 "positive regulation of tumor
necrosis factor biosynthetic process" evidence=IEA] [GO:0045410
"positive regulation of interleukin-6 biosynthetic process"
evidence=IEA] InterPro:IPR001611 InterPro:IPR027187 PROSITE:PS51450
GO:GO:0042742 GO:GO:0002224 GO:GO:0052033 GO:GO:0042535
GO:GO:0071723 GO:GO:0002282 GO:GO:0045410 EMBL:AC108044
HGNC:HGNC:11847 PANTHER:PTHR24365:SF130 GO:GO:0032493
IPI:IPI00966563 ProteinModelPortal:D6RAP2 SMR:D6RAP2
Ensembl:ENST00000505940 ArrayExpress:D6RAP2 Bgee:D6RAP2
Uniprot:D6RAP2
Length = 161
Score = 116 (45.9 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 42/142 (29%), Positives = 72/142 (50%)
Query: 1 MTLRIASTINKEKENFLV-LAGVGLTEAPSIGMWKETTRMSLMQNAIQNL--TEIPTCPR 57
+ L+I +++E E FLV + GL P + ++TT +++ QN I L ++I + +
Sbjct: 13 LILQIRIQLSEESE-FLVDRSKNGLIHVPK-DLSQKTTILNISQNYISELWTSDILSLSK 70
Query: 58 LRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGIT 117
LR L + N + + + F L L LS+N+ ++ + V+L+HLD+S+
Sbjct: 71 LRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVK---ISCHPTVNLKHLDLSFNAFD 127
Query: 118 TLPI--ELKYLVNLKCLNLEYT 137
LPI E + LK L L T
Sbjct: 128 ALPICKEFGNMSQLKFLGLSTT 149
>RGD|1309601 [details] [associations]
symbol:Lrrc8d "leucine rich repeat containing 8 family, member
D" species:10116 "Rattus norvegicus" [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
RGD:1309601 GO:GO:0016021 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00600000084236 HOGENOM:HOG000231806
HOVERGEN:HBG052360 InterPro:IPR021040 Pfam:PF12534 CTD:55144
OMA:AFSFLRD OrthoDB:EOG4HX50B EMBL:BC085783 IPI:IPI00197391
RefSeq:NP_001008339.2 UniGene:Rn.7626 ProteinModelPortal:Q5U308
PRIDE:Q5U308 Ensembl:ENSRNOT00000002888 GeneID:305131
KEGG:rno:305131 InParanoid:Q5U308 NextBio:654122
Genevestigator:Q5U308 GermOnline:ENSRNOG00000002121 Uniprot:Q5U308
Length = 858
Score = 137 (53.3 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 40/124 (32%), Positives = 71/124 (57%)
Query: 39 MSLMQNAIQNLTEIPT---CPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLEN 95
+ L N+I+ + EI + RL L L N + + + H + +L L S N+ LE+
Sbjct: 663 LDLKSNSIRTIEEIISFQHLKRLTCLKLWHNKIVAIPPSITH-VKNLESLYFSNNK-LES 720
Query: 96 LPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLR 155
LP+ +F+L L+ LD+S+ I+T+PIE+ L NL+ L++ ++ +P+Q+ +K LR
Sbjct: 721 LPVAVFSLQKLRCLDVSYNNISTIPIEIGLLQNLQHLHITGN-KVDVLPKQLFKCVK-LR 778
Query: 156 ALRM 159
L +
Sbjct: 779 TLNL 782
>RGD|1591781 [details] [associations]
symbol:Rsu1 "Ras suppressor protein 1" species:10116 "Rattus
norvegicus" [GO:0007265 "Ras protein signal transduction"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1591781 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GeneTree:ENSGT00660000095190 IPI:IPI00782386
Ensembl:ENSRNOT00000057827 UCSC:RGD:1591781 OMA:RDFNERI
ArrayExpress:D4A8F2 Uniprot:D4A8F2
Length = 247
Score = 128 (50.1 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 46/146 (31%), Positives = 75/146 (51%)
Query: 17 LVLAGVGLTEAP-SIGMWKETTRMSLMQNAIQNL-TEIPTCPRLRTLFLPSNHLGTVSNN 74
LVL+ LT P ++ K ++ N I+ L T+I + +L+ L L N L T+
Sbjct: 45 LVLSHNKLTTVPPNVAELKNLEVLNFFNNQIEELPTQISSLQKLKHLNLGMNRLNTLPRG 104
Query: 75 FFHSMASLRVLILSYNRSLEN-LPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLN 133
F S+ +L VL L+YN E+ LP F L +L+ L +S LP ++ L L+ L+
Sbjct: 105 F-GSLPALEVLDLTYNNLNEHSLPGNFFYLTTLRALYLSDNDFEILPPDIGKLTKLQILS 163
Query: 134 LEYTFRLSRIPQQVISDLKMLRALRM 159
L +S +P++ I +L L+ L +
Sbjct: 164 LRDNDLIS-LPKE-IGELTQLKELHI 187
>UNIPROTKB|F1MBT2 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048715 "negative regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0005154 "epidermal growth
factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:DAAA02052480
IPI:IPI01003440 Ensembl:ENSBTAT00000031490 Uniprot:F1MBT2
Length = 614
Score = 135 (52.6 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 70/253 (27%), Positives = 113/253 (44%)
Query: 31 GMWKETTRMSLMQNAIQNLT--EIPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILS 88
G+ ET + L +N I+ L E + P L L L N + V F+++ +LR L L
Sbjct: 62 GIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLR 121
Query: 89 YNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIELKY--LVNLKCLNLEYTFRLSRIPQ 145
NR L+ +PLG+F L +L LDIS I L ++ + L NLK L + L I
Sbjct: 122 SNR-LKLIPLGVFTGLSNLTKLDISENKIVIL-LDYMFQDLYNLKSLEVGDN-DLVYISH 178
Query: 146 QVISDLKMLRALRMFECGF-NVELEADSILFGDSXXXXXXXXXXXXXXXXTITLQSFGAL 204
+ S L L L + +C ++ EA S L G L L
Sbjct: 179 RAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVL 238
Query: 205 QRLLSYCRLGSISTQCLCLRHLNNSN----SLSVFAFASLRHL---RTLQLYFNDLEELK 257
+ + + L +++ CL +L + + +L+ + ++RHL R L L +N + ++
Sbjct: 239 E-ISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIE 297
Query: 258 IDA-GELKRIREI 269
EL R++EI
Sbjct: 298 GSMLHELLRLQEI 310
>UNIPROTKB|Q96FE5 [details] [associations]
symbol:LINGO1 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 1" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005154 "epidermal growth factor receptor binding"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IEA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0050770 "regulation of
axonogenesis" evidence=TAS] [GO:0050771 "negative regulation of
axonogenesis" evidence=TAS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 Reactome:REACT_111102 GO:GO:0048011 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
EMBL:CH471136 GO:GO:0043491 GO:GO:0031175 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0050771
GO:GO:0021954 MEROPS:I43.001 GO:GO:0048715 Orphanet:862
OrthoDB:EOG40S0F8 CTD:84894 HOVERGEN:HBG057546 OMA:RIRDRKP
EMBL:AY324320 EMBL:AY324322 EMBL:AY324323 EMBL:AY358284
EMBL:AK027500 EMBL:AK291363 EMBL:BC011057 EMBL:BC068558
EMBL:AL834260 IPI:IPI00465325 IPI:IPI00795326 RefSeq:NP_116197.4
UniGene:Hs.656765 UniGene:Hs.736275 PDB:2ID5 PDBsum:2ID5
ProteinModelPortal:Q96FE5 SMR:Q96FE5 IntAct:Q96FE5
MINT:MINT-1378183 STRING:Q96FE5 PhosphoSite:Q96FE5 PaxDb:Q96FE5
PRIDE:Q96FE5 Ensembl:ENST00000355300 Ensembl:ENST00000561030
GeneID:84894 KEGG:hsa:84894 UCSC:uc002bct.1 GeneCards:GC15M077905
H-InvDB:HIX0012466 HGNC:HGNC:21205 HPA:HPA011630 MIM:609791
neXtProt:NX_Q96FE5 PharmGKB:PA162394087 InParanoid:Q96FE5
EvolutionaryTrace:Q96FE5 GenomeRNAi:84894 NextBio:75236 Bgee:Q96FE5
CleanEx:HS_LINGO1 Genevestigator:Q96FE5 Uniprot:Q96FE5
Length = 620
Score = 135 (52.6 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 70/253 (27%), Positives = 113/253 (44%)
Query: 31 GMWKETTRMSLMQNAIQNLT--EIPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILS 88
G+ ET + L +N I+ L E + P L L L N + V F+++ +LR L L
Sbjct: 68 GIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLR 127
Query: 89 YNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIELKY--LVNLKCLNLEYTFRLSRIPQ 145
NR L+ +PLG+F L +L LDIS I L ++ + L NLK L + L I
Sbjct: 128 SNR-LKLIPLGVFTGLSNLTKLDISENKIVIL-LDYMFQDLYNLKSLEVGDN-DLVYISH 184
Query: 146 QVISDLKMLRALRMFECGF-NVELEADSILFGDSXXXXXXXXXXXXXXXXTITLQSFGAL 204
+ S L L L + +C ++ EA S L G L L
Sbjct: 185 RAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVL 244
Query: 205 QRLLSYCRLGSISTQCLCLRHLNNSN----SLSVFAFASLRHL---RTLQLYFNDLEELK 257
+ + + L +++ CL +L + + +L+ + ++RHL R L L +N + ++
Sbjct: 245 E-ISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIE 303
Query: 258 IDA-GELKRIREI 269
EL R++EI
Sbjct: 304 GSMLHELLRLQEI 316
>UNIPROTKB|F1SJ87 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048715 "negative regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0005154 "epidermal growth
factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:CT954219
Ensembl:ENSSSCT00000002097 Uniprot:F1SJ87
Length = 620
Score = 135 (52.6 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 70/253 (27%), Positives = 113/253 (44%)
Query: 31 GMWKETTRMSLMQNAIQNLT--EIPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILS 88
G+ ET + L +N I+ L E + P L L L N + V F+++ +LR L L
Sbjct: 68 GIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLR 127
Query: 89 YNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIELKY--LVNLKCLNLEYTFRLSRIPQ 145
NR L+ +PLG+F L +L LDIS I L ++ + L NLK L + L I
Sbjct: 128 SNR-LKLIPLGVFTGLSNLTKLDISENKIVIL-LDYMFQDLYNLKSLEVGDN-DLVYISH 184
Query: 146 QVISDLKMLRALRMFECGF-NVELEADSILFGDSXXXXXXXXXXXXXXXXTITLQSFGAL 204
+ S L L L + +C ++ EA S L G L L
Sbjct: 185 RAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVL 244
Query: 205 QRLLSYCRLGSISTQCLCLRHLNNSN----SLSVFAFASLRHL---RTLQLYFNDLEELK 257
+ + + L +++ CL +L + + +L+ + ++RHL R L L +N + ++
Sbjct: 245 E-ISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIE 303
Query: 258 IDA-GELKRIREI 269
EL R++EI
Sbjct: 304 GSMLHELLRLQEI 316
>UNIPROTKB|E2RJ80 [details] [associations]
symbol:PIDD "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0006977 "DNA damage response, signal
transduction by p53 class mediator resulting in cell cycle arrest"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] Pfam:PF00560 InterPro:IPR000488 Pfam:PF00531
InterPro:IPR001611 InterPro:IPR019502 Pfam:PF10461 PROSITE:PS50017
GO:GO:0005634 GO:GO:0005737 GO:GO:0006915 GO:GO:0043066
GO:GO:0006977 InterPro:IPR003591 SMART:SM00369 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 InterPro:IPR000906 Pfam:PF00791
PROSITE:PS51145 GeneTree:ENSGT00700000104417 CTD:55367 KO:K10130
OMA:FVRLQGN EMBL:AAEX03011526 RefSeq:XP_540770.2
Ensembl:ENSCAFT00000015119 GeneID:483649 KEGG:cfa:483649
Uniprot:E2RJ80
Length = 911
Score = 137 (53.3 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 50/161 (31%), Positives = 84/161 (52%)
Query: 4 RIASTINKEKENFLVLAGV---GLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTC-PRLR 59
R+ S + + +++ VL LT P+ G+ R++ + + +L +P C P++R
Sbjct: 91 RLRSLVLRGGQHWDVLGACLRGSLTTLPA-GL-SGLARLAHLDLSFNSLETLPACIPQMR 148
Query: 60 ---TLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGI 116
TL L NHL + ++ SL L +++NR L+ LP+ + L +LQ LD+S +
Sbjct: 149 GLSTLLLSYNHLSELPEAL-GALPSLTFLSVTHNR-LQTLPIALGALSTLQRLDLSGNLL 206
Query: 117 TTLPIELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRAL 157
TLP E+ L +L LNL RL +P ++ L+ LR L
Sbjct: 207 DTLPPEIGGLSSLTELNLASN-RLQGLPTSLVG-LRSLRLL 245
>TAIR|locus:2052367 [details] [associations]
symbol:RLP29 "receptor like protein 29" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0031225 "anchored to membrane" evidence=TAS] [GO:0009505
"plant-type cell wall" evidence=IDA] [GO:0002237 "response to
molecule of bacterial origin" evidence=RCA] [GO:0007165 "signal
transduction" evidence=RCA] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] [GO:0048443 "stamen development"
evidence=RCA] Pfam:PF00560 InterPro:IPR001611 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0031225 eggNOG:COG4886
GO:GO:0009505 EMBL:AC006931 EMBL:BT023464 IPI:IPI00537249
PIR:D84858 RefSeq:NP_181808.1 UniGene:At.14156
ProteinModelPortal:Q9SJH6 SMR:Q9SJH6 PaxDb:Q9SJH6 PRIDE:Q9SJH6
EnsemblPlants:AT2G42800.1 GeneID:818880 KEGG:ath:AT2G42800
TAIR:At2g42800 HOGENOM:HOG000238246 InParanoid:Q9SJH6 OMA:LQYFIMD
PhylomeDB:Q9SJH6 ProtClustDB:CLSN2683939 ArrayExpress:Q9SJH6
Genevestigator:Q9SJH6 Uniprot:Q9SJH6
Length = 462
Score = 133 (51.9 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 35/81 (43%), Positives = 49/81 (60%)
Query: 78 SMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGIT-TLPIELKYLVNLKCLNLEY 136
S+ SL++L LS NR ++P IF+L SL HLD+S+ +T +P++L L NL L+L Y
Sbjct: 163 SLKSLQILTLSQNRLTGDIPPAIFSLKSLVHLDLSYNKLTGKIPLQLGNLNNLVGLDLSY 222
Query: 137 TFRLSRIPQQVISDLKMLRAL 157
IP IS L ML+ L
Sbjct: 223 NSLTGTIPP-TISQLGMLQKL 242
>UNIPROTKB|B4DHD1 [details] [associations]
symbol:RXFP1 "Relaxin receptor 1" species:9606 "Homo
sapiens" [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR008112
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 GO:GO:0004930
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 SMART:SM00013
EMBL:AC107219 UniGene:Hs.591686 HGNC:HGNC:19718 HOVERGEN:HBG026354
HOGENOM:HOG000049056 EMBL:AC019341 EMBL:AC107056 EMBL:AC108017
EMBL:AC121161 EMBL:AC125489 EMBL:AK295040 IPI:IPI00910652
SMR:B4DHD1 STRING:B4DHD1 Ensembl:ENST00000448688 UCSC:uc010iql.3
Uniprot:B4DHD1
Length = 652
Score = 135 (52.6 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 44/132 (33%), Positives = 67/132 (50%)
Query: 41 LMQNAIQNLTEIPTC---PRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLP 97
LM N + L + P C PRL L + N + ++ N F + L L L N+ +ENLP
Sbjct: 148 LMNNVLTRLPDKPLCQHMPRLHWLVMRKNKINHLNENTFAPLQKLDELDLGSNK-IENLP 206
Query: 98 LGIF-NLVSLQHLDISWTGITTLPI-ELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLR 155
IF +L L L++S+ I + + YLV LK L+LE +S I Q++ L L
Sbjct: 207 PLIFKDLKELSQLNLSYNPIQKIQANQFDYLVKLKSLSLE-GIEISNIQQRMFRPLMNLS 265
Query: 156 AL--RMFE-CGF 164
+ + F+ CG+
Sbjct: 266 HIYFKKFQYCGY 277
>WB|WBGene00004854 [details] [associations]
symbol:slt-1 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=ISS] [GO:0005102 "receptor binding"
evidence=ISS;IPI] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IGI;IMP] [GO:0001764 "neuron migration" evidence=IMP]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IGI] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0001764
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR006207
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 HSSP:P00740
GO:GO:0033563 GeneTree:ENSGT00700000104083 EMBL:Z69792
GO:GO:0048843 EMBL:AL022270 PIR:D89711 PIR:T22025
RefSeq:NP_510437.2 ProteinModelPortal:G5EFX6 SMR:G5EFX6
EnsemblMetazoa:F40E10.4 GeneID:181562 KEGG:cel:CELE_F40E10.4
CTD:181562 WormBase:F40E10.4 OMA:KSISHIA NextBio:914450
Uniprot:G5EFX6
Length = 1410
Score = 127 (49.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 45/143 (31%), Positives = 69/143 (48%)
Query: 21 GVGLTEAPSIGMWKETTRMSLMQNAIQNL--TEIPTCPRLRTLFLPSNHLGTVSNNFFHS 78
G LTE P + +T R+ L N I + + + L+ L L N + T+ N F S
Sbjct: 32 GQQLTEVPQ-NIPNDTIRLDLQDNEITKIGPNDFSSLMNLKALQLMDNQIVTIHNQSFSS 90
Query: 79 MASLRVLILSYNRSLENLPLGIF-NLVSLQHLDISWTGITTLP-IELKYLVNLKCLNLEY 136
+ L+ L LS NR + +LP +F N + L HLD+S IT + +L+ L+ LNL+
Sbjct: 91 LVFLQKLRLSRNR-IRHLPDNVFQNNLKLTHLDLSENDITVVSDAQLQGPEFLEVLNLDK 149
Query: 137 TFRLSRIPQQVISDLKMLRALRM 159
+ + VIS L L +
Sbjct: 150 N-HIFCLENNVISSWVSLEVLTL 171
Score = 58 (25.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 236 AFASLRHLRTLQLYFNDLEELKIDAGE 262
AF L +L TL LY N++ +LK D E
Sbjct: 330 AFLGLHNLHTLVLYGNNITDLKSDTFE 356
Score = 50 (22.7 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 23/69 (33%), Positives = 31/69 (44%)
Query: 209 SYCRLGSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDLEELKIDA-GELKRIR 267
++ L +ST L + + N L AF L LR L L+ ND+ L A L I
Sbjct: 747 TFSNLTRLST--LIISY-NKLRCLQPLAFNGLNALRILSLHGNDISFLPQSAFSNLTSIT 803
Query: 268 EIC-GFHSL 275
I G +SL
Sbjct: 804 HIAVGSNSL 812
Score = 41 (19.5 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 219 QCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDLEELKIDAGELKRI 266
+C CL + ++ ++ +F S T +LY + +I A +L R+
Sbjct: 680 KCSCLDRVVRCSNKNLTSFPSRIPFDTTELYLDANYINEIPAHDLNRL 727
Score = 39 (18.8 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 226 LNNSNSLSVFAFASLRH---LRTLQLYFNDLEEL 256
L N+N L+ + H L L LY ND++ +
Sbjct: 365 LLNANQLTCIRRGTFDHVPKLSMLSLYDNDIKSI 398
>ZFIN|ZDB-GENE-080219-38 [details] [associations]
symbol:zgc:172282 "zgc:172282" species:7955 "Danio
rerio" [GO:0016020 "membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 ZFIN:ZDB-GENE-080219-38 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
HOVERGEN:HBG052352 EMBL:BC171440 IPI:IPI00882605 UniGene:Dr.85826
ProteinModelPortal:B7ZV32 Uniprot:B7ZV32
Length = 687
Score = 134 (52.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 37/126 (29%), Positives = 66/126 (52%)
Query: 39 MSLMQNAIQNLTE--IPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENL 96
++L +N I + RLR L L SN L ++++ F + +LR LIL+ N L N+
Sbjct: 80 LTLSRNTISQIMPYTFADLKRLRALHLDSNRLSVITDDHFRGLTNLRHLILA-NNQLHNI 138
Query: 97 PLGIFN--LVSLQHLDISWTGITTLPIE-LKYLVNLKCLNLEYTFRLSRIPQQVISDLKM 153
F+ L +L+ LD+S+ + +P + + L N+ LN+++ + +P + S+L
Sbjct: 139 SPHAFDDFLGTLEDLDLSYNNLVDIPWDTIGRLTNVNTLNMDHNL-IDHVPLGIFSNLHK 197
Query: 154 LRALRM 159
L L M
Sbjct: 198 LARLDM 203
>FB|FBgn0033984 [details] [associations]
symbol:Lap1 "Lap1" species:7227 "Drosophila melanogaster"
[GO:0017016 "Ras GTPase binding" evidence=ISS] [GO:0007163
"establishment or maintenance of cell polarity" evidence=ISS;NAS]
[GO:0005912 "adherens junction" evidence=ISS] [GO:0015031 "protein
transport" evidence=ISS] Pfam:PF00595 Pfam:PF00560
InterPro:IPR001611 InterPro:IPR001478 PROSITE:PS50106
PROSITE:PS51450 SMART:SM00228 EMBL:AE013599 GO:GO:0007163
GO:GO:0015031 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0005912 SUPFAM:SSF50156 InterPro:IPR025875 Pfam:PF12799
KO:K01768 GeneTree:ENSGT00650000093182 EMBL:BT011365
RefSeq:NP_001188938.1 RefSeq:NP_611007.1 UniGene:Dm.12431
ProteinModelPortal:Q9V780 SMR:Q9V780 IntAct:Q9V780 MINT:MINT-820636
STRING:Q9V780 PaxDb:Q9V780 PRIDE:Q9V780 EnsemblMetazoa:FBtr0087407
EnsemblMetazoa:FBtr0303759 GeneID:36670 KEGG:dme:Dmel_CG10255
UCSC:CG10255-RA CTD:36670 FlyBase:FBgn0033984 InParanoid:Q9V780
OMA:NETYLEF OrthoDB:EOG4QFTV6 PhylomeDB:Q9V780 GenomeRNAi:36670
NextBio:799782 Bgee:Q9V780 GermOnline:CG10255 Uniprot:Q9V780
Length = 849
Score = 135 (52.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 72/273 (26%), Positives = 119/273 (43%)
Query: 29 SIGMWKETTRMSLMQNAIQNLTE-IPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLIL 87
+IG ++ + L +N I N+ E I +C L L L N L + + S+ SL+ L+L
Sbjct: 81 AIGSLRQLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDAIT-SLISLQELLL 139
Query: 88 SYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYTFRLSRIPQQV 147
+ LE LP LV+L+ L++ + TLP + L+NL+ L++ + +P+ V
Sbjct: 140 N-ETYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVRLINLQRLDIGGN-EFTELPE-V 196
Query: 148 ISDLKMLRALRMFECGFNVELEADSILFGDSXXXXXXXXXXXXXXXXTITLQSFGALQRL 207
+ +LK LR L + FN ++ S G L ++ ++ +
Sbjct: 197 VGELKSLRELWI---DFN-QIRRVSANIGKLRDLQHFEANGNLLDTLPSELSNWRNVE-V 251
Query: 208 LSYCRLGSISTQCLCLRHLNNSNSLSVFAFAS--LRHLRTLQLYFNDLEELKIDAGELKR 265
LS C S+ + L SL F S L L Y LEEL + +L R
Sbjct: 252 LSICS-NSLEAFPFSVGMLK---SLVTFKCESNGLTELPDSISYLEQLEELVLSHNKLIR 307
Query: 266 IREICGF-HSLQKVFYKILKI-EARDMACTCSQ 296
+ G SL+ +F ++ + D C+C Q
Sbjct: 308 LPSTIGMLRSLRFLFADDNQLRQLPDELCSCQQ 340
>UNIPROTKB|I3LT51 [details] [associations]
symbol:LGR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048839 "inner ear development" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591
SMART:SM00369 GO:GO:0048839 GeneTree:ENSGT00650000092962
EMBL:CU695170 EMBL:CU463987 EMBL:CU466536
Ensembl:ENSSSCT00000029371 OMA:YSTHILM Uniprot:I3LT51
Length = 210
Score = 84 (34.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 214 GSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDLEELKIDAGELKRIREICGFH 273
G++S+ + H N +SL F L L TL L +N+L+E L ++E+ GFH
Sbjct: 88 GNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPTAIRTLSNLKEL-GFH 146
Query: 274 S 274
S
Sbjct: 147 S 147
Score = 82 (33.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 63 LPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTLPI 121
L +NHL V ++ SL+ L L N + +P F+ L SL+HL + +T +P+
Sbjct: 2 LQNNHLRQVPTEALQNLRSLQSLRLDANH-ISYVPPSCFSGLHSLRHLWLDDNALTEIPV 60
Query: 122 E-LKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRALRM 159
+ + L L+ + L ++ IP +L L L +
Sbjct: 61 QAFRSLSALQAMTLALN-KIHHIPDYAFGNLSSLVVLHL 98
>UNIPROTKB|K7EP27 [details] [associations]
symbol:FLII "Protein flightless-1 homolog" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007122 PROSITE:PS51450
PANTHER:PTHR11977 EMBL:AC127537 HGNC:HGNC:3750
Ensembl:ENST00000581349 Uniprot:K7EP27
Length = 133
Score = 109 (43.4 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 37/113 (32%), Positives = 56/113 (49%)
Query: 51 EIPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLEN--LPLGIFNLVSLQH 108
E+ +L L + N+L T+ S+ SLR ++ N SL+N +P IF L L
Sbjct: 20 ELAALQKLEHLSVSHNNLTTLHGEL-SSLPSLRAIVARAN-SLKNSGVPDDIFKLDDLSV 77
Query: 109 LDISWTGITTLPIELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRALRMFE 161
LD+S +T P EL+ N+ LNL + + IP Q+ +L L L + E
Sbjct: 78 LDLSHNQLTECPRELENAKNMLVLNLSHN-SIDTIPNQLFINLTDLLYLDLSE 129
>MGI|MGI:1915522 [details] [associations]
symbol:Lingo1 "leucine rich repeat and Ig domain containing
1" species:10090 "Mus musculus" [GO:0005154 "epidermal growth
factor receptor binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IMP;IDA] [GO:0031175 "neuron projection
development" evidence=IDA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IDA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:1915522 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0043491 GO:GO:0031175
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GO:GO:0021954 HSSP:P21809 GO:GO:0048715
GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971 OrthoDB:EOG40S0F8
CTD:84894 HOVERGEN:HBG057546 EMBL:AK027262 EMBL:AK163538
EMBL:BC052384 EMBL:BC065696 EMBL:AY324324 IPI:IPI00134200
RefSeq:NP_851419.1 UniGene:Mm.246605 ProteinModelPortal:Q9D1T0
SMR:Q9D1T0 IntAct:Q9D1T0 STRING:Q9D1T0 PhosphoSite:Q9D1T0
PaxDb:Q9D1T0 PRIDE:Q9D1T0 Ensembl:ENSMUST00000053568
Ensembl:ENSMUST00000114247 GeneID:235402 KEGG:mmu:235402
InParanoid:Q9D1T0 ChiTaRS:LINGO1 NextBio:382644 Bgee:Q9D1T0
Genevestigator:Q9D1T0 Uniprot:Q9D1T0
Length = 614
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 70/253 (27%), Positives = 113/253 (44%)
Query: 31 GMWKETTRMSLMQNAIQNLT--EIPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILS 88
G+ ET + L +N I+ L E + P L L L N + V F+++ +LR L L
Sbjct: 62 GIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLR 121
Query: 89 YNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIELKY--LVNLKCLNLEYTFRLSRIPQ 145
NR L+ +PLG+F L +L LDIS I L ++ + L NLK L + L I
Sbjct: 122 SNR-LKLIPLGVFTGLSNLTKLDISENKIVIL-LDYMFQDLYNLKSLEVGDN-DLVYISH 178
Query: 146 QVISDLKMLRALRMFECGF-NVELEADSILFGDSXXXXXXXXXXXXXXXXTITLQSFGAL 204
+ S L L L + +C ++ EA S L G L L
Sbjct: 179 RAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVL 238
Query: 205 QRLLSYCRLGSISTQCLCLRHLNNSN----SLSVFAFASLRHL---RTLQLYFNDLEELK 257
+ + + L +++ CL +L + + +L+ + ++RHL R L L +N + ++
Sbjct: 239 E-ISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIE 297
Query: 258 IDA-GELKRIREI 269
EL R++EI
Sbjct: 298 GSMLHELLRLQEI 310
>UNIPROTKB|G3V881 [details] [associations]
symbol:Lingo1 "Leucine rich repeat neuronal 6A, isoform
CRA_a" species:10116 "Rattus norvegicus" [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0048715 "negative
regulation of oligodendrocyte differentiation" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1308668 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:CH473975
GeneTree:ENSGT00690000101682 CTD:84894 RefSeq:NP_001094192.1
UniGene:Rn.20269 ProteinModelPortal:G3V881 SMR:G3V881 PRIDE:G3V881
Ensembl:ENSRNOT00000023084 GeneID:315691 KEGG:rno:315691
NextBio:669664 Uniprot:G3V881
Length = 620
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 70/253 (27%), Positives = 113/253 (44%)
Query: 31 GMWKETTRMSLMQNAIQNLT--EIPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILS 88
G+ ET + L +N I+ L E + P L L L N + V F+++ +LR L L
Sbjct: 68 GIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLR 127
Query: 89 YNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIELKY--LVNLKCLNLEYTFRLSRIPQ 145
NR L+ +PLG+F L +L LDIS I L ++ + L NLK L + L I
Sbjct: 128 SNR-LKLIPLGVFTGLSNLTKLDISENKIVIL-LDYMFQDLYNLKSLEVGDN-DLVYISH 184
Query: 146 QVISDLKMLRALRMFECGF-NVELEADSILFGDSXXXXXXXXXXXXXXXXTITLQSFGAL 204
+ S L L L + +C ++ EA S L G L L
Sbjct: 185 RAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVL 244
Query: 205 QRLLSYCRLGSISTQCLCLRHLNNSN----SLSVFAFASLRHL---RTLQLYFNDLEELK 257
+ + + L +++ CL +L + + +L+ + ++RHL R L L +N + ++
Sbjct: 245 E-ISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIE 303
Query: 258 IDA-GELKRIREI 269
EL R++EI
Sbjct: 304 GSMLHELLRLQEI 316
>UNIPROTKB|Q9BXB1 [details] [associations]
symbol:LGR4 "Leucine-rich repeat-containing G-protein
coupled receptor 4" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0061290 "canonical Wnt receptor signaling pathway involved in
metanephric kidney development" evidence=IEA] [GO:0072202 "cell
differentiation involved in metanephros development" evidence=IEA]
[GO:0072224 "metanephric glomerulus development" evidence=IEA]
[GO:0072282 "metanephric nephron tubule morphogenesis"
evidence=IEA] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=TAS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS00237
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0045892 GO:GO:0045893 EMBL:CH471064 GO:GO:0004930
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282
EMBL:AF346711 EMBL:AF346709 EMBL:AF346710 EMBL:AF257182
EMBL:AC090597 IPI:IPI00217954 RefSeq:NP_060960.2 UniGene:Hs.502176
ProteinModelPortal:Q9BXB1 SMR:Q9BXB1 DIP:DIP-59894N STRING:Q9BXB1
PhosphoSite:Q9BXB1 DMDM:212286375 PaxDb:Q9BXB1 PRIDE:Q9BXB1
DNASU:55366 Ensembl:ENST00000379214 GeneID:55366 KEGG:hsa:55366
UCSC:uc001mrj.4 CTD:55366 GeneCards:GC11M027345 H-InvDB:HIX0009517
HGNC:HGNC:13299 HPA:HPA030267 MIM:606666 neXtProt:NX_Q9BXB1
PharmGKB:PA28893 HOVERGEN:HBG031675 InParanoid:Q9BXB1 KO:K04309
OMA:DGYWSDC OrthoDB:EOG476JZH ChiTaRS:LGR4 GenomeRNAi:55366
NextBio:59753 ArrayExpress:Q9BXB1 Bgee:Q9BXB1 CleanEx:HS_LGR4
Genevestigator:Q9BXB1 GermOnline:ENSG00000205213 GO:GO:0072202
GO:GO:0072224 Uniprot:Q9BXB1
Length = 951
Score = 135 (52.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 89/344 (25%), Positives = 145/344 (42%)
Query: 20 AGVGLTEAPSIGMWKETTRMSLMQNAIQNLTE--IPTCPRLRTLFLPSNHLGTVSNNFFH 77
+G GLT P G+ T + + N I L E P L L L N L +
Sbjct: 44 SGKGLTAVPE-GLSAFTQALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALS 102
Query: 78 SMASLRVLILSYNRSLENLPL-GIFNLVSLQHLDISWTGITTLPIE-LKYLVNLKCLNLE 135
+ L+VL L N L+ +P I L +LQ L + IT++P + + LV L+ L L+
Sbjct: 103 GLKELKVLTLQ-NNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLD 161
Query: 136 YTFRLSRIPQQVISDLKMLRALRMFECGFNVELEADSIL-FGDSXXXXXXXXXXXXXXXX 194
L+ +P +S+L L+AL + N + SI F +
Sbjct: 162 DN-SLTEVPVHPLSNLPTLQALTL---ALN---KISSIPDFAFTNLSSLVVLHLHNNKIR 214
Query: 195 TITLQSFGALQRL----LSYCRLGSI--STQCL-CLRHLN-NSNSLSVF---AFASLRHL 243
+++ F L L L+Y LG + + L L+ L +SNS+SV AF L
Sbjct: 215 SLSQHCFDGLDNLETLDLNYNNLGEFPQAIKALPSLKELGFHSNSISVIPDGAFDGNPLL 274
Query: 244 RTLQLYFNDLEELKIDA-GELKRIREIC--GFHSLQKVFYKILKIEARDMACTCSQYQAC 300
RT+ LY N L + A L + + G +Q+ + + T ++ +
Sbjct: 275 RTIHLYDNPLSFVGNSAFHNLSDLHSLVIRGASMVQQFPNLTGTVHLESLTLTGTKISSI 334
Query: 301 PRGLTKFEEHPLKRLECA--ELKELPL--DCNHGLEQKIIIKGQ 340
P L + E+ L+ L+ + +++LP C H LE+ + + Q
Sbjct: 335 PNNLCQ-EQKMLRTLDLSYNNIRDLPSFNGC-HALEEISLQRNQ 376
>UNIPROTKB|Q7L1W4 [details] [associations]
symbol:LRRC8D "Leucine-rich repeat-containing protein 8D"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 EMBL:CH471097
InterPro:IPR025875 Pfam:PF12799 HOGENOM:HOG000231806
HOVERGEN:HBG052360 InterPro:IPR021040 Pfam:PF12534 EMBL:AL391497
EMBL:BC024159 EMBL:AK001332 EMBL:AY358874 IPI:IPI00018213
RefSeq:NP_001127951.1 RefSeq:NP_060573.2 UniGene:Hs.482087
ProteinModelPortal:Q7L1W4 SMR:Q7L1W4 IntAct:Q7L1W4
PhosphoSite:Q7L1W4 DMDM:51701663 PaxDb:Q7L1W4 PRIDE:Q7L1W4
DNASU:55144 Ensembl:ENST00000337338 Ensembl:ENST00000394593
GeneID:55144 KEGG:hsa:55144 UCSC:uc001dnm.3 CTD:55144
GeneCards:GC01P090286 HGNC:HGNC:16992 HPA:HPA014745 MIM:612890
neXtProt:NX_Q7L1W4 PharmGKB:PA30464 InParanoid:Q7L1W4 OMA:AFSFLRD
OrthoDB:EOG4HX50B PhylomeDB:Q7L1W4 ChiTaRS:LRRC8D GenomeRNAi:55144
NextBio:58848 ArrayExpress:Q7L1W4 Bgee:Q7L1W4 CleanEx:HS_LRRC8D
Genevestigator:Q7L1W4 GermOnline:ENSG00000171492 Uniprot:Q7L1W4
Length = 858
Score = 134 (52.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 40/124 (32%), Positives = 70/124 (56%)
Query: 39 MSLMQNAIQNLTEIPT---CPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLEN 95
+ L N I+ + EI + RL L L N + T+ + H + +L L S N+ LE+
Sbjct: 663 LDLKSNNIRTIEEIISFQHLKRLTCLKLWHNKIVTIPPSITH-VKNLESLYFSNNK-LES 720
Query: 96 LPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLR 155
LP+ +F+L L+ LD+S+ I+ +PIE+ L NL+ L++ ++ +P+Q+ +K LR
Sbjct: 721 LPVAVFSLQKLRCLDVSYNNISMIPIEIGLLQNLQHLHITGN-KVDILPKQLFKCIK-LR 778
Query: 156 ALRM 159
L +
Sbjct: 779 TLNL 782
>TAIR|locus:2827587 [details] [associations]
symbol:PIRL5 "AT2G17440" species:3702 "Arabidopsis
thaliana" [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR025875 Pfam:PF12799 EMBL:AY849575
EMBL:AK228738 IPI:IPI00548995 PIR:C84552 RefSeq:NP_179336.1
UniGene:At.40141 ProteinModelPortal:Q5G5E0 SMR:Q5G5E0 STRING:Q5G5E0
PaxDb:Q5G5E0 PRIDE:Q5G5E0 EnsemblPlants:AT2G17440.1 GeneID:816250
KEGG:ath:AT2G17440 TAIR:At2g17440 HOGENOM:HOG000242894 OMA:LSENCIM
PhylomeDB:Q5G5E0 ProtClustDB:CLSN2683891 Genevestigator:Q5G5E0
Uniprot:Q5G5E0
Length = 526
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 69/242 (28%), Positives = 104/242 (42%)
Query: 29 SIGMWKETTRMSLMQNAIQNL-TEIPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLIL 87
S+G R+ L +N I L I L L L SN +G + + + +L L L
Sbjct: 225 SLGKLSSLVRLDLSENCIMVLPATIGGLISLTRLDLHSNRIGQLPESI-GDLLNLVNLNL 283
Query: 88 SYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYTFRLSRIPQQV 147
S N+ L +LP L+ L+ LD+S ++ LP + LV+LK L++E T + IP
Sbjct: 284 SGNQ-LSSLPSSFNRLIHLEELDLSSNSLSILPESIGSLVSLKKLDVE-TNNIEEIPHS- 340
Query: 148 ISDLKMLRALRMFECGFNVELEADSILFGDSXXXXXXXXXXXXXXXXTITLQSFGALQRL 207
IS + LR +N L+A G T+ S L+ L
Sbjct: 341 ISGCSSMEELR---ADYN-RLKALPEAVGKLSTLEILTVRYNNIRQLPTTMSSMANLKEL 396
Query: 208 -LSYCRLGSISTQCLC----LRHLNNSNSLSVFAFASLRHLRTLQLYFNDLEELKIDAGE 262
+S+ L S+ + LC L LN N+ FA+LR L L LEEL + +
Sbjct: 397 DVSFNELESVP-ESLCYAKTLVKLNIGNN-----FANLRSLPGLIGNLEKLEELDMSNNQ 450
Query: 263 LK 264
++
Sbjct: 451 IR 452
Score = 126 (49.4 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 67/243 (27%), Positives = 104/243 (42%)
Query: 29 SIGMWKETTRMSLMQNAIQNLTE-IPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLIL 87
+IG TR+ L N I L E I L L L N L ++ ++F + + L L L
Sbjct: 248 TIGGLISLTRLDLHSNRIGQLPESIGDLLNLVNLNLSGNQLSSLPSSF-NRLIHLEELDL 306
Query: 88 SYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYTFRLSRIPQQV 147
S N SL LP I +LVSL+ LD+ I +P + +++ L +Y RL +P+ V
Sbjct: 307 SSN-SLSILPESIGSLVSLKKLDVETNNIEEIPHSISGCSSMEELRADYN-RLKALPEAV 364
Query: 148 --ISDLKMLRA----LRMFECGFN--VELEADSILFGDSXXXXXXXXXXXXXXXXTITLQ 199
+S L++L +R + L+ + F + I
Sbjct: 365 GKLSTLEILTVRYNNIRQLPTTMSSMANLKELDVSFNELESVPESLCYAKTLVKLNIG-N 423
Query: 200 SFGALQRLLSYCRLGSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDLEELKID 259
+F L+ L +G++ + L NN ++F +L +LR LQ N LEEL D
Sbjct: 424 NFANLRSLPGL--IGNLE-KLEELDMSNNQIRFLPYSFKTLSNLRVLQTEQNPLEELPRD 480
Query: 260 AGE 262
E
Sbjct: 481 ITE 483
>RGD|70551 [details] [associations]
symbol:Lrrc15 "leucine rich repeat containing 15" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IDA]
[GO:0007154 "cell communication" evidence=TAS] [GO:0016021 "integral
to membrane" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 RGD:70551 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005622
InterPro:IPR000372 SMART:SM00013 GO:GO:0007154 CTD:131578
HOVERGEN:HBG052343 EMBL:AB071036 IPI:IPI00201949 RefSeq:NP_659551.1
UniGene:Rn.213072 ProteinModelPortal:Q8R5M3 PRIDE:Q8R5M3
GeneID:246296 KEGG:rno:246296 UCSC:RGD:70551 NextBio:623686
Genevestigator:Q8R5M3 Uniprot:Q8R5M3
Length = 578
Score = 131 (51.2 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 38/137 (27%), Positives = 77/137 (56%)
Query: 28 PSIGMW-KETTRMSLMQNAIQNLTE--IPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRV 84
P I M + +++L N+++ L+ P LR L+L +NH+ ++++N F + L+V
Sbjct: 262 PGIFMQLPQLNKLTLFGNSLRELSPGVFGPMPNLRELWLYNNHITSLADNTFSHLNQLQV 321
Query: 85 LILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIEL-KYLVNLKCLNLEYTFRLSR 142
LILS+N+ L + G FN L +L+ L + + L + + L NL+ ++L+ RL +
Sbjct: 322 LILSHNQ-LTYISPGAFNGLTNLRELSLHTNALQDLDSNVFRSLANLQNISLQSN-RLRQ 379
Query: 143 IPQQVISDLKMLRALRM 159
+P + +++ L +++
Sbjct: 380 LPGSIFANVNGLTTIQL 396
>UNIPROTKB|F1S6B4 [details] [associations]
symbol:PRELP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031012 "extracellular matrix" evidence=IDA]
[GO:0007569 "cell aging" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005201 "extracellular
matrix structural constituent" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027216 PROSITE:PS51450 GO:GO:0031012
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0007569
GeneTree:ENSGT00600000084286 PANTHER:PTHR24371:SF15 OMA:NKLEHLY
EMBL:CU466494 Ensembl:ENSSSCT00000016640 Uniprot:F1S6B4
Length = 375
Score = 128 (50.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 36/129 (27%), Positives = 65/129 (50%)
Query: 34 KETTRMSLMQNAIQNLT-EIPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNR- 91
K +++L N ++ + ++PT + L+L SN + T+ N +F +L + L+YN+
Sbjct: 220 KNLMQLNLAHNILRKMPPKVPTA--IHQLYLDSNKIETIPNGYFKGFPNLAFIRLNYNKL 277
Query: 92 SLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLN--LEYTFRLSRIPQQVIS 149
S LP FN+ +L L +S I+ +P L +L N +E +S P ++
Sbjct: 278 SDRGLPKNSFNISNLLVLHLSHNKISNVPAINNKLEHLYLNNNSIEIKMSISEFPTTIVD 337
Query: 150 DLKMLRALR 158
DL+ + LR
Sbjct: 338 DLENVPHLR 346
>RGD|1564460 [details] [associations]
symbol:Tlr11 "toll-like receptor 11" species:10116 "Rattus
norvegicus" [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=IEA] [GO:0004888 "transmembrane
signaling receptor activity" evidence=IEA] [GO:0009617 "response to
bacterium" evidence=IEA;ISO] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0034170 "toll-like receptor 11 signaling pathway"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0050707 "regulation of cytokine secretion" evidence=IEA]
[GO:0050729 "positive regulation of inflammatory response"
evidence=IEA] InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027194 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
RGD:1564460 GO:GO:0007165 GO:GO:0009617 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0005622
GeneTree:ENSGT00700000104185 SUPFAM:SSF52200 CTD:239081
HOGENOM:HOG000236285 HOVERGEN:HBG080130 OrthoDB:EOG473PQT
PANTHER:PTHR24365:SF68 EMBL:FJ539013 IPI:IPI00557597
UniGene:Rn.141275 STRING:B8YJH0 Ensembl:ENSRNOT00000039925
UCSC:RGD:1564460 NextBio:699954 Genevestigator:B8YJH0
Uniprot:B8YJH0
Length = 927
Score = 122 (48.0 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 44/150 (29%), Positives = 74/150 (49%)
Query: 15 NFLVLAGVGLTEAP-SIGMWKETTRMSLMQNAIQNLT---EIPTCPRLRTLFLPSNHLGT 70
+FL L G G+ + P S+ + E + L +N IQN+ +I L+ L L NHL +
Sbjct: 267 HFLSLVGTGIEKLPASVTGFSELCALDLGKNQIQNILGNGDILGLKALKFLSLHDNHLQS 326
Query: 71 VSNNFFHSMASLRVLILSYNR--SLENLPLGIFNLVSLQHLDISWTGITTLPI-ELKYLV 127
+ F ++ L+ L LS N+ + LP G+F+ +L LD+S + +P +L
Sbjct: 327 LPVRFLRTLPQLQKLNLSMNKLGPILELPEGLFS-TNLTVLDLSHNQLCEIPRGNFSFLS 385
Query: 128 NLKCLNLEYTFRLSRIPQQVISDLKMLRAL 157
L+ L L +S + + + L+ LR L
Sbjct: 386 QLQELWLSGN-NISSLSNESLQGLRWLRTL 414
Score = 56 (24.8 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 18/45 (40%), Positives = 23/45 (51%)
Query: 219 QCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDLEELKIDAGEL 263
Q L L HLN N LSV +F L+ L+ L L E+ + EL
Sbjct: 609 QVLALSHLNLKN-LSVSSFKGLQSLKLLLLNSERALEMNSNLQEL 652
>MGI|MGI:1922368 [details] [associations]
symbol:Lrrc8d "leucine rich repeat containing 8D"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1922368
GO:GO:0016021 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00600000084236
HOGENOM:HOG000231806 HOVERGEN:HBG052360 InterPro:IPR021040
Pfam:PF12534 CTD:55144 OMA:AFSFLRD OrthoDB:EOG4HX50B ChiTaRS:LRRC8D
EMBL:AK046249 EMBL:AK050400 EMBL:AK080722 EMBL:AK137459
EMBL:BC037717 IPI:IPI00350794 RefSeq:NP_001116240.1
RefSeq:NP_848816.3 UniGene:Mm.23837 ProteinModelPortal:Q8BGR2
SMR:Q8BGR2 PhosphoSite:Q8BGR2 PaxDb:Q8BGR2 PRIDE:Q8BGR2
Ensembl:ENSMUST00000060531 Ensembl:ENSMUST00000120847 GeneID:231549
KEGG:mmu:231549 UCSC:uc008ylg.2 InParanoid:Q8BGR2 NextBio:380602
Bgee:Q8BGR2 CleanEx:MM_LRRC8D Genevestigator:Q8BGR2
GermOnline:ENSMUSG00000046079 Uniprot:Q8BGR2
Length = 859
Score = 132 (51.5 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 40/124 (32%), Positives = 69/124 (55%)
Query: 39 MSLMQNAIQNLTEIPT---CPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLEN 95
+ L N I+ + EI + RL L L N + + + H + +L L S N+ LE+
Sbjct: 664 LDLKSNNIRTIEEIISFQHLKRLTCLKLWHNKIVAIPPSITH-VKNLESLYFSNNK-LES 721
Query: 96 LPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLR 155
LP +F+L L+ LD+S+ I+T+PIE+ L NL+ L++ ++ +P+Q+ +K LR
Sbjct: 722 LPTAVFSLQKLRCLDVSYNNISTIPIEIGLLQNLQHLHITGN-KVDILPKQLFKCVK-LR 779
Query: 156 ALRM 159
L +
Sbjct: 780 TLNL 783
>UNIPROTKB|F1Q3G2 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846 "axon
extension involved in axon guidance" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0035385 "Roundabout
signaling pathway" evidence=IEA] [GO:0032870 "cellular response to
hormone stimulus" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0010629 "negative regulation of gene
expression" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0008285 GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 OMA:SVDCHGL EMBL:AAEX03003028 EMBL:AAEX03003027
Ensembl:ENSCAFT00000026988 Uniprot:F1Q3G2
Length = 1319
Score = 119 (46.9 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 44/165 (26%), Positives = 82/165 (49%)
Query: 15 NFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTE--IPTCPRLRTLFLPSNHLGTVS 72
N + G GLTE P+ + + + L QN+I+++ +L+ + + N + ++
Sbjct: 86 NIVDCRGKGLTEIPA-NLPEGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIA 144
Query: 73 NNFFHSMASLRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIE-LKYLVNLK 130
+ F + SL L+L Y + L G+F+ LVSLQ L ++ I L + + L NL
Sbjct: 145 PDAFQGLKSLTSLVL-YGNKITELAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLN 203
Query: 131 CLNLEYTFRLSRIPQQVISDLKMLRALRM----FECGFNVELEAD 171
L+L Y +L I + + + L+ ++ L + F C +++ AD
Sbjct: 204 LLSL-YDNKLQTISKGLFAPLQAIQTLHLAQNPFVCDCHLKWLAD 247
Score = 62 (26.9 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 20/63 (31%), Positives = 35/63 (55%)
Query: 213 LGSISTQCLCLRHLN----NSNSLSV---FAFASLRHLRTLQLYFNDLEELKIDAGE-LK 264
L ++ + LRHL ++NS+ V + F+++ HL TL L +N L + I A + L+
Sbjct: 561 LTAVPRELSALRHLTLIDLSNNSIGVLTNYTFSNMSHLSTLILSYNRLRCIPIHAFDGLR 620
Query: 265 RIR 267
+R
Sbjct: 621 SLR 623
Score = 58 (25.5 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 200 SFGALQRLLSYCRLGSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDLEEL 256
S G L ++ + +ST L L + N + + AF LR LR L L+ ND+ +
Sbjct: 583 SIGVLTNY-TFSNMSHLST--LILSY-NRLRCIPIHAFDGLRSLRVLTLHGNDISSV 635
>UNIPROTKB|F1PGX0 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0021954 "central nervous
system neuron development" evidence=IEA] [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:AAEX03016347
ProteinModelPortal:F1PGX0 Ensembl:ENSCAFT00000028688 Uniprot:F1PGX0
Length = 620
Score = 130 (50.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 70/253 (27%), Positives = 112/253 (44%)
Query: 31 GMWKETTRMSLMQNAIQNLT--EIPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILS 88
G+ ET + L +N I+ L E + P L L L N + V F+++ SLR L L
Sbjct: 68 GIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFSLRTLGLR 127
Query: 89 YNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIELKY--LVNLKCLNLEYTFRLSRIPQ 145
NR L+ +PLG+F L +L LDIS I L ++ + L NLK L + L I
Sbjct: 128 SNR-LKLIPLGVFTGLSNLTKLDISENKIVIL-LDYMFQDLYNLKSLEVGDN-DLVYISH 184
Query: 146 QVISDLKMLRALRMFECGF-NVELEADSILFGDSXXXXXXXXXXXXXXXXTITLQSFGAL 204
+ S L L L + +C ++ EA S L L L
Sbjct: 185 RAFSGLNSLEQLTLEKCNLTSIPTEALSHLHSLIVLRLRHLNINAIRDYSFKRLYRLKVL 244
Query: 205 QRLLSYCRLGSISTQCLCLRHLNNSN----SLSVFAFASLRHL---RTLQLYFNDLEELK 257
+ + + L +++ CL +L + + +L+ + ++RHL R L L +N + ++
Sbjct: 245 E-ISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGTIE 303
Query: 258 IDA-GELKRIREI 269
EL R++EI
Sbjct: 304 GSMLHELLRLQEI 316
>ZFIN|ZDB-GENE-030722-3 [details] [associations]
symbol:slit1a "slit homolog 1a (Drosophila)"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS] [GO:0005576
"extracellular region" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-030722-3 GO:GO:0007411 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0045773 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 Pfam:PF12661
GO:GO:0051964 Pfam:PF01463 HOVERGEN:HBG057959 KO:K06838
EMBL:DQ177286 IPI:IPI00506990 RefSeq:NP_001030140.1
UniGene:Dr.88478 ProteinModelPortal:Q3S2J2 SMR:Q3S2J2 STRING:Q3S2J2
GeneID:556123 KEGG:dre:556123 CTD:556123 NextBio:20881326
Uniprot:Q3S2J2
Length = 1524
Score = 119 (46.9 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 46/165 (27%), Positives = 81/165 (49%)
Query: 15 NFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCP--RLRTLFLPSNHLGTVS 72
N + G G T PS + T + L QN+I+++ P +LR + L +N + ++
Sbjct: 284 NIVDCRGKGPTLIPS-SLPDSMTEIRLEQNSIKSIPPGAFSPYKKLRRIDLSNNQISELA 342
Query: 73 NNFFHSMASLRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIE-LKYLVNLK 130
+ F + SL L+L Y + +LP G+F+ L +LQ L ++ I L + L NL
Sbjct: 343 PDAFQGLRSLNSLVL-YGNKITDLPRGVFDGLHALQLLLLNANKIHCLRANTFQDLQNLS 401
Query: 131 CLNLEYTFRLSRIPQQVISDLKMLRALRM----FECGFNVELEAD 171
L+L Y ++ + + S L+ ++ L + F C N++ AD
Sbjct: 402 LLSL-YDNKIQTLAKGTFSSLRAIQTLHLAQNPFICDCNLKWLAD 445
Score = 63 (27.2 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 209 SYCRLGSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDLEEL 256
S+ + ++T L L + N + AF+ LR LR L L+ ND+ EL
Sbjct: 796 SFTNMSQLTT--LILSY-NALRCIPTLAFSGLRSLRLLSLHGNDISEL 840
>UNIPROTKB|Q9HBL6 [details] [associations]
symbol:LRTM1 "Leucine-rich repeat and transmembrane
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 SMART:SM00013
HSSP:Q9BZR6 eggNOG:KOG0619 EMBL:AF225421 EMBL:BC040732
EMBL:BC074741 IPI:IPI00010227 IPI:IPI00478406 RefSeq:NP_065729.1
UniGene:Hs.591668 ProteinModelPortal:Q9HBL6 SMR:Q9HBL6
STRING:Q9HBL6 DMDM:74761612 PRIDE:Q9HBL6 Ensembl:ENST00000273286
Ensembl:ENST00000493075 GeneID:57408 KEGG:hsa:57408 UCSC:uc003dhl.3
CTD:57408 GeneCards:GC03M054928 H-InvDB:HIX0003383 HGNC:HGNC:25023
HPA:HPA013839 neXtProt:NX_Q9HBL6 PharmGKB:PA142671499
HOGENOM:HOG000290674 HOVERGEN:HBG067803 InParanoid:Q9HBL6
OMA:CLMMLAA OrthoDB:EOG42JNS0 PhylomeDB:Q9HBL6 GenomeRNAi:57408
NextBio:63528 Bgee:Q9HBL6 CleanEx:HS_LRTM1 Genevestigator:Q9HBL6
Uniprot:Q9HBL6
Length = 345
Score = 126 (49.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 45/147 (30%), Positives = 75/147 (51%)
Query: 15 NFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIP--TCPRLRTLFLPSNHLGTVS 72
NF+ + GL E PS + +T + L N I +L + P L TL L +N L ++
Sbjct: 32 NFVDCSQQGLAEIPS-HLPPQTRTLHLQDNQIHHLPAFAFRSVPWLMTLNLSNNSLSNLA 90
Query: 73 NNFFHSMASLRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIEL-KYLVNLK 130
FH + L+VL L+ N SL +L +F+ L L+ LD+S I+ LP L + NL
Sbjct: 91 PGAFHGLQHLQVLNLTQN-SLLSLESRLFHSLPQLRELDLSSNNISHLPTSLGETWENLT 149
Query: 131 CLNLEYTFRLSRIPQQVISDLKMLRAL 157
L ++ +L ++ + ++ + +R L
Sbjct: 150 ILAVQQN-QLQQLDRALLESMPSVRLL 175
>UNIPROTKB|Q6NSJ5 [details] [associations]
symbol:LRRC8E "Leucine-rich repeat-containing protein 8E"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 EMBL:CH471139
InterPro:IPR025875 Pfam:PF12799 EMBL:AC010336 HOGENOM:HOG000231806
HOVERGEN:HBG052360 InterPro:IPR021040 Pfam:PF12534
OrthoDB:EOG4N8R44 EMBL:AK027073 EMBL:AK091134 EMBL:AL834474
EMBL:BX538180 EMBL:BC022216 EMBL:BC070089 EMBL:BC108252
IPI:IPI00419535 RefSeq:NP_001255213.1 RefSeq:NP_001255214.1
RefSeq:NP_079337.2 UniGene:Hs.501511 ProteinModelPortal:Q6NSJ5
SMR:Q6NSJ5 PhosphoSite:Q6NSJ5 DMDM:296434573 PaxDb:Q6NSJ5
PRIDE:Q6NSJ5 DNASU:80131 Ensembl:ENST00000306708 GeneID:80131
KEGG:hsa:80131 UCSC:uc002mir.3 CTD:80131 GeneCards:GC19P007953
H-InvDB:HIX0202737 HGNC:HGNC:26272 HPA:HPA020466 MIM:612891
neXtProt:NX_Q6NSJ5 PharmGKB:PA142671537 InParanoid:Q6NSJ5
OMA:FINQLCY PhylomeDB:Q6NSJ5 GenomeRNAi:80131 NextBio:70383
Bgee:Q6NSJ5 CleanEx:HS_LRRC8E Genevestigator:Q6NSJ5
GermOnline:ENSG00000171017 Uniprot:Q6NSJ5
Length = 796
Score = 130 (50.8 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 50/148 (33%), Positives = 74/148 (50%)
Query: 17 LVLAGVGLTEAP----SIGMWKETTRMSLMQNAIQNLTEIPT---CPRLRTLFLPSNHLG 69
L L GL P S+G +E + L N ++++ EI + C +L TL L N +
Sbjct: 587 LELVACGLERIPHAVFSLGALQE---LDLKDNHLRSIEEILSFQHCRKLVTLRLWHNQIA 643
Query: 70 TVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNL 129
V + + SL L LSYN+ LE LP + L+ LD+S G+ +LP E+ L NL
Sbjct: 644 YVPEHV-RKLRSLEQLYLSYNK-LETLPSQLGLCSGLRLLDVSHNGLHSLPPEVGLLQNL 701
Query: 130 KCLNLEYTFRLSRIPQQVISDLKMLRAL 157
+ L L Y L +P+++ K LR L
Sbjct: 702 QHLALSYN-ALEALPEELFFCRK-LRTL 727
>TAIR|locus:2197563 [details] [associations]
symbol:AT1G33590 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006952 "defense
response" evidence=ISS] [GO:0007165 "signal transduction"
evidence=IC] [GO:0005618 "cell wall" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0009505 "plant-type cell wall"
evidence=IDA] [GO:0080167 "response to karrikin" evidence=IEP]
[GO:0005829 "cytosol" evidence=RCA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009617 "response to bacterium"
evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
acid mediated signaling pathway" evidence=RCA] [GO:0009867
"jasmonic acid mediated signaling pathway" evidence=RCA]
[GO:0010310 "regulation of hydrogen peroxide metabolic process"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0031348 "negative regulation of defense
response" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] Pfam:PF00560 InterPro:IPR001611
EMBL:CP002684 GO:GO:0009507 GO:GO:0080167 GO:GO:0009505
InterPro:IPR013210 Pfam:PF08263 IPI:IPI00516781 RefSeq:NP_564426.1
UniGene:At.26728 ProteinModelPortal:F4HR88 SMR:F4HR88 PRIDE:F4HR88
EnsemblPlants:AT1G33590.1 GeneID:840253 KEGG:ath:AT1G33590
OMA:YLELGHN Uniprot:F4HR88
Length = 477
Score = 127 (49.8 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 52/167 (31%), Positives = 82/167 (49%)
Query: 10 NKEKENFLVLAGVGLTEA-PSI-GMWKETTRMSLMQNAIQ-NLT-EIPT-CPRLRTLFLP 64
N + ++L L G LT P I E ++L +N NL I + P LR L L
Sbjct: 196 NLKLMSYLNLGGNRLTGTIPDIFKSMPELRSLTLSRNGFSGNLPPSIASLAPILRFLELG 255
Query: 65 SNHL-GTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIEL 123
N L GT+ N F + +L L LS NR +P NL + +LD+S +T P +
Sbjct: 256 HNKLSGTIPN-FLSNFKALDTLDLSKNRFSGVIPKSFANLTKIFNLDLSHNLLTD-PFPV 313
Query: 124 KYLVNLKCLNLEYT-FRLSRIPQQVISDLKMLRALRMFECGFNVELE 169
+ ++ L+L Y F L+ IP+ V S ++ +L++ +CG + L+
Sbjct: 314 LNVKGIESLDLSYNQFHLNTIPKWVTSS-PIIFSLKLAKCGIKMSLD 359
>RGD|1302973 [details] [associations]
symbol:Rxfp1 "relaxin/insulin-like family peptide receptor 1"
species:10116 "Rattus norvegicus" [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA;ISO;IDA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007188 "adenylate cyclase-modulating
G-protein coupled receptor signaling pathway" evidence=IEA;ISO]
[GO:0007189 "adenylate cyclase-activating G-protein coupled
receptor signaling pathway" evidence=IMP] [GO:0007567 "parturition"
evidence=IEA;ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA;ISO] [GO:0030198
"extracellular matrix organization" evidence=IEA;ISO] [GO:0042562
"hormone binding" evidence=IEA;ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0060427 "lung connective tissue development"
evidence=IEA;ISO] [GO:0060658 "nipple morphogenesis"
evidence=IEA;ISO] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002172 InterPro:IPR008112 InterPro:IPR017452
Pfam:PF00001 Pfam:PF00057 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS00237 PROSITE:PS50068 PROSITE:PS50262 PROSITE:PS51450
SMART:SM00192 RGD:1302973 GO:GO:0016021 GO:GO:0005886 GO:GO:0030154
GO:GO:0046872 GO:GO:0004930 GO:GO:0007189 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0030198 GO:GO:0042562
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 GO:GO:0007567 InterPro:IPR000372 SMART:SM00013
HSSP:P01130 GO:GO:0060427 CTD:59350 HOVERGEN:HBG026354 KO:K04306
GO:GO:0060658 HOGENOM:HOG000049056 OrthoDB:EOG4NGGM1 EMBL:AY509976
IPI:IPI00409992 RefSeq:NP_958820.1 UniGene:Rn.109230
ProteinModelPortal:Q6R6I6 SMR:Q6R6I6 STRING:Q6R6I6
PhosphoSite:Q6R6I6 PRIDE:Q6R6I6 GeneID:295144 KEGG:rno:295144
UCSC:RGD:1302973 InParanoid:Q6R6I6 NextBio:639021
Genevestigator:Q6R6I6 Uniprot:Q6R6I6
Length = 758
Score = 129 (50.5 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 47/158 (29%), Positives = 75/158 (47%)
Query: 17 LVLAGVGLTEAPSIGMWKETTRMSLMQ---NAIQNLTEIP--TCPRLRTLFLPSNHLGTV 71
LVL LT P + + R+ + N I NL + +C L L + N + +
Sbjct: 227 LVLMNNALTRLPDKPLCQHMPRLHWLDFEGNRIHNLRNLTFISCNNLTVLVMRKNKINHL 286
Query: 72 SNNFFHSMASLRVLILSYNRSLENLPLGIF-NLVSLQHLDISWTGITTLPI-ELKYLVNL 129
+ + F + L L L N+ +ENLP IF +L L L+IS+ I + + + YL L
Sbjct: 287 NEHAFTHLQKLDELDLGSNK-IENLPPNIFKDLKELSQLNISYNPIQKIEVNQFDYLAKL 345
Query: 130 KCLNLEYTFRLSRIPQQVISDLKMLRAL--RMFE-CGF 164
K L+LE +S I Q++ L L + + F+ CG+
Sbjct: 346 KSLSLE-GIEISNIQQRMFRPLINLSHIYFKKFQYCGY 382
>ZFIN|ZDB-GENE-030722-4 [details] [associations]
symbol:slit1b "slit homolog 1b (Drosophila)"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 ZFIN:ZDB-GENE-030722-4 GO:GO:0007411
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 HOVERGEN:HBG057959
EMBL:DQ153065 IPI:IPI00481688 RefSeq:NP_001030147.1
UniGene:Dr.48282 ProteinModelPortal:Q3Y6S4 SMR:Q3Y6S4 STRING:Q3Y6S4
GeneID:561685 KEGG:dre:561685 CTD:561685 NextBio:20884046
Uniprot:Q3Y6S4
Length = 1532
Score = 133 (51.9 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 45/165 (27%), Positives = 84/165 (50%)
Query: 15 NFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTE--IPTCPRLRTLFLPSNHLGTVS 72
N + G GLT P+ M + T + L QN I+++ + RLR + L +N + ++
Sbjct: 287 NIVDCRGKGLTAIPA-NMPESMTEIRLEQNGIKSVPPGAFSSYKRLRRIDLSNNQISEIA 345
Query: 73 NNFFHSMASLRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIEL-KYLVNLK 130
+ FH + SL L+L Y + +LP G+F+ L +L+ L ++ I + + + + L NL
Sbjct: 346 PDAFHGLRSLNSLVL-YGNKITDLPRGVFDGLSALELLLLNANKIHCVRVNVFQDLENLS 404
Query: 131 CLNLEYTFRLSRIPQQVISDLKMLRALRM----FECGFNVELEAD 171
L+L Y ++ + + + LK ++ L + F C ++ AD
Sbjct: 405 LLSL-YDNKIQTLAKGTFAPLKSIQTLHLAQNPFVCDCGLKWLAD 448
Score = 46 (21.3 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 214 GSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDLEEL 256
G + L LR+ N+ + +F+ L+++R L LY N L +
Sbjct: 608 GMDGLRMLMLRN-NHIRCVHNSSFSGLQNVRLLSLYDNQLSTI 649
Score = 45 (20.9 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 228 NSNSLSVFA----FASLRHLRTLQLYFNDLEELKIDAGE 262
N+N LS+ F L HL+ + L N + E++ A E
Sbjct: 545 NNNDLSILEATGLFRPLTHLKKINLSNNKITEIEDGAFE 583
>RGD|1308146 [details] [associations]
symbol:Shoc2 "soc-2 (suppressor of clear) homolog (C. elegans)"
species:10116 "Rattus norvegicus" [GO:0000164 "protein phosphatase
type 1 complex" evidence=IEA;ISO;ISS] [GO:0005634 "nucleus"
evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0019903 "protein phosphatase binding" evidence=IEA;ISO;ISS]
[GO:0046579 "positive regulation of Ras protein signal
transduction" evidence=IEA;ISO;ISS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR027036 PROSITE:PS51450 RGD:1308146 GO:GO:0005634
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HSSP:P07359
HOGENOM:HOG000116557 CTD:8036 HOVERGEN:HBG055661 OrthoDB:EOG408N7W
PANTHER:PTHR23155:SF38 EMBL:BC079032 IPI:IPI00464721
RefSeq:NP_001013173.1 UniGene:Rn.156055 ProteinModelPortal:Q6AYI5
PRIDE:Q6AYI5 GeneID:309548 KEGG:rno:309548 UCSC:RGD:1308146
InParanoid:Q6AYI5 NextBio:660958 ArrayExpress:Q6AYI5
Genevestigator:Q6AYI5 Uniprot:Q6AYI5
Length = 582
Score = 122 (48.0 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 60/233 (25%), Positives = 105/233 (45%)
Query: 28 PSIGMWKETTRMSLMQNAIQNL-TEIPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLI 86
PS+ + T + L N +Q+L E+ L TL L N L ++ ++ ++ LR+L
Sbjct: 117 PSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSL-DNLKKLRMLD 175
Query: 87 LSYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYTFRLSRIPQQ 146
L +N+ L +P ++ L SL L + + IT + +++ L L L++ ++ ++P +
Sbjct: 176 LRHNK-LREIPSVVYRLDSLTTLYLRFNRITAVEKDVRNLPRLSTLSIREN-KIKQLPAE 233
Query: 147 VISDLKMLRALRMFECGFNVELEADSILFGDSXXXXXXXXXXXXXXXXTITLQSFGALQR 206
I +L L L + N +LE G+ T+ + +L R
Sbjct: 234 -IGELCNLITL---DVAHN-QLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLNR 288
Query: 207 L-LSYCRLGSIS---TQCLCLRHLN-NSNSLSVFA---FASLRHLRTLQLYFN 251
L L Y RL +I +C L LN +N++S +SL L +L L N
Sbjct: 289 LGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARN 341
Score = 48 (22.0 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 18/69 (26%), Positives = 35/69 (50%)
Query: 238 ASLRHLRTLQLYFNDLEELKIDAGELKRIREI-CGFHSLQKVFYKILKI-EARDMACTCS 295
+ L L L L N L++L G L+++RE+ + L+ + +I + + + + T +
Sbjct: 422 SGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNN 481
Query: 296 QYQACPRGL 304
Q PRG+
Sbjct: 482 QLTTLPRGI 490
>MGI|MGI:103040 [details] [associations]
symbol:Rsu1 "Ras suppressor protein 1" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0007265
"Ras protein signal transduction" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:103040 GO:GO:0007265
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875
Pfam:PF12799 HOGENOM:HOG000116557 HOVERGEN:HBG002478
OrthoDB:EOG4HX51M ChiTaRS:RSU1 EMBL:X63039 IPI:IPI00555071
PIR:S25770 UniGene:Mm.905 ProteinModelPortal:Q01730 SMR:Q01730
IntAct:Q01730 STRING:Q01730 PhosphoSite:Q01730 PaxDb:Q01730
PRIDE:Q01730 InParanoid:Q01730 CleanEx:MM_RSU1
Genevestigator:Q01730 GermOnline:ENSMUSG00000026727 Uniprot:Q01730
Length = 277
Score = 122 (48.0 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 46/146 (31%), Positives = 73/146 (50%)
Query: 17 LVLAGVGLTEAP-SIGMWKETTRMSLMQNAIQNL-TEIPTCPRLRTLFLPSNHLGTVSNN 74
LVL+ LT P ++ K ++ N I+ L T+I + +L+ L L N L T+
Sbjct: 45 LVLSHNKLTTVPPNVAELKNLEVLNFFNNQIEELPTQISSLQKLKHLNLGMNRLNTLPRG 104
Query: 75 FFHSMASLRVLILSYNRSLEN-LPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLN 133
F S L VL L+YN E+ LP F L +L+ L +S LP ++ L L+ L+
Sbjct: 105 FGSSRL-LEVLELTYNNLNEHSLPGNFFYLTTLRALYLSDNDFEILPPDIGKLTKLQILS 163
Query: 134 LEYTFRLSRIPQQVISDLKMLRALRM 159
L +S +P++ I +L L+ L +
Sbjct: 164 LRDNDLIS-LPKE-IGELTQLKELHI 187
>UNIPROTKB|E9PCA3 [details] [associations]
symbol:RXFP1 "Relaxin receptor 1" species:9606 "Homo
sapiens" [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007188 "adenylate cyclase-modulating G-protein coupled
receptor signaling pathway" evidence=IEA] [GO:0007567 "parturition"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0042562 "hormone binding" evidence=IEA] [GO:0060427 "lung
connective tissue development" evidence=IEA] [GO:0060658 "nipple
morphogenesis" evidence=IEA] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR01739 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0030154 GO:GO:0004930 GO:GO:0007189 InterPro:IPR003591
SMART:SM00369 GO:GO:0030198 GO:GO:0042562 GO:GO:0007567
InterPro:IPR000372 SMART:SM00013 EMBL:AC107219 GO:GO:0060427
HGNC:HGNC:19718 GO:GO:0060658 EMBL:AC019341 EMBL:AC107056
EMBL:AC108017 EMBL:AC121161 EMBL:AC125489 IPI:IPI00965023
ProteinModelPortal:E9PCA3 SMR:E9PCA3 Ensembl:ENST00000460056
ArrayExpress:E9PCA3 Bgee:E9PCA3 Uniprot:E9PCA3
Length = 676
Score = 128 (50.1 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 49/158 (31%), Positives = 75/158 (47%)
Query: 17 LVLAGVGLTEAPSIGMWKETTRM---SLMQNAIQNLTEIP--TCPRLRTLFLPSNHLGTV 71
LVL LT P + + R+ L N I NL + +C L L + N + +
Sbjct: 146 LVLMNNVLTRLPDKPLCQHMPRLHWLDLEGNHIHNLRNLTFISCSNLTVLVMRKNKINHL 205
Query: 72 SNNFFHSMASLRVLILSYNRSLENLPLGIF-NLVSLQHLDISWTGITTLPI-ELKYLVNL 129
+ N F + L L L N+ +ENLP IF +L L L++S+ I + + YLV L
Sbjct: 206 NENTFAPLQKLDELDLGSNK-IENLPPLIFKDLKELSQLNLSYNPIQKIQANQFDYLVKL 264
Query: 130 KCLNLEYTFRLSRIPQQVISDLKMLRAL--RMFE-CGF 164
K L+LE +S I Q++ L L + + F+ CG+
Sbjct: 265 KSLSLE-GIEISNIQQRMFRPLMNLSHIYFKKFQYCGY 301
>UNIPROTKB|F1MLX5 [details] [associations]
symbol:LGR4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090190 "positive regulation of branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0072282 "metanephric
nephron tubule morphogenesis" evidence=IEA] [GO:0072224
"metanephric glomerulus development" evidence=IEA] [GO:0072202
"cell differentiation involved in metanephros development"
evidence=IEA] [GO:0061290 "canonical Wnt receptor signaling pathway
involved in metanephric kidney development" evidence=IEA]
[GO:0050673 "epithelial cell proliferation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0045892 GO:GO:0045893 InterPro:IPR003591 SMART:SM00369
GO:GO:0030539 GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282
OMA:DGYWSDC GO:GO:0072202 GO:GO:0072224 EMBL:DAAA02041144
IPI:IPI00713357 Ensembl:ENSBTAT00000003370 Uniprot:F1MLX5
Length = 1034
Score = 130 (50.8 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 90/358 (25%), Positives = 144/358 (40%)
Query: 20 AGVGLTEAPSIGMWKETTRMSLMQNAIQNLTE--IPTCPRLRTLFLPSNHLGTVSNNFFH 77
+G GLT P G+ T + + N I L E P L L L N L +
Sbjct: 127 SGKGLTAVPE-GLSAFTQLLDISMNNITQLPEDAFKNFPFLEELRLAGNDLSFIHPKALS 185
Query: 78 SMASLRVLILSYNRSLENLPL-GIFNLVSLQHLDISWTGITTLPIE-LKYLVNLKCLNLE 135
+ L+VL L N L+ +P I L SLQ L + IT++P + + L L+ L L+
Sbjct: 186 GLKELKVLTLQ-NNQLKTVPSEAIRGLSSLQSLRLDANHITSVPEDSFEGLTQLRHLWLD 244
Query: 136 YTFRLSRIPQQVISDLKMLRALRMFECGFNVELEADSIL-FGDSXXXXXXXXXXXXXXXX 194
L+ +P +S+L L+AL + N + SI F +
Sbjct: 245 DN-SLTEVPVHPLSNLPTLQALTL---ALN---KISSIPDFAFTNLSSLVVLHLHNNKIK 297
Query: 195 TITLQSFGALQRL----LSYCRLGSISTQCLCLRHLN----NSNSLSVF---AFASLRHL 243
++ F L L L+Y LG L L +SNS+SV AF L
Sbjct: 298 SLGQHCFDGLDNLETLDLNYNNLGEFPQAIKALPSLKELLFHSNSISVIPDGAFDGNPLL 357
Query: 244 RTLQLYFNDLEELKIDA-GELKRIREIC--GFHSLQKVFYKILKIEARDMACTCSQYQAC 300
+T+ LY N L + A L + + G +Q+ + + T ++ +
Sbjct: 358 KTIHLYDNPLSFVGNSAFHNLSELHSLVIRGASMVQRFPNLTGTVRLESLTLTGTKISSI 417
Query: 301 PRGLTKFEEHPLKRLECA--ELKELPL--DCNHGLEQKIIIKGQEHWWNELQWDDLST 354
L + E+ L+ L+ + +K+LP C H LE+ + + Q H E + L++
Sbjct: 418 SNNLCQ-EQKRLRTLDLSYNSIKDLPSFNGC-HALEEISLQRNQIHQIKEDTFQGLTS 473
>RGD|69311 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA;ISO] [GO:0007411 "axon guidance" evidence=ISO]
[GO:0007420 "brain development" evidence=IEP] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA;ISO] [GO:0009887
"organ morphogenesis" evidence=IEA;ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA;ISO]
[GO:0032870 "cellular response to hormone stimulus"
evidence=IEA;ISO] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA;ISO] [GO:0048495 "Roundabout binding" evidence=IEA;ISO]
[GO:0048846 "axon extension involved in axon guidance"
evidence=IEA;ISO] [GO:0050919 "negative chemotaxis"
evidence=IEA;ISO] [GO:0051414 "response to cortisol stimulus"
evidence=IEA;ISO] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA;ISO] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA;ISO] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69311 GO:GO:0008285 GO:GO:0005615
GO:GO:0007420 GO:GO:0016020 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 123 (48.4 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 44/165 (26%), Positives = 83/165 (50%)
Query: 15 NFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTE--IPTCPRLRTLFLPSNHLGTVS 72
N + G GLTE P+ + + + L QN+I+++ +L+ + + N + ++
Sbjct: 289 NIVDCRGKGLTEIPA-NLPEGIVEIRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIA 347
Query: 73 NNFFHSMASLRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIE-LKYLVNLK 130
+ F + SL L+L Y + +P G+F+ LVSLQ L ++ I L + + L NL
Sbjct: 348 PDAFQGLKSLTSLVL-YGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLN 406
Query: 131 CLNLEYTFRLSRIPQQVISDLKMLRALRM----FECGFNVELEAD 171
L+L Y +L I + + + L+ ++ L + F C +++ AD
Sbjct: 407 LLSL-YDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLAD 450
Score = 56 (24.8 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 209 SYCRLGSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDLEEL 256
++ + +ST L L + N + V AF LR LR L L+ ND+ +
Sbjct: 794 TFSNMSHLST--LILSY-NRLRCIPVHAFNGLRSLRVLTLHGNDISSV 838
Score = 52 (23.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 227 NNSNS-LSVFAFASLRHLRTLQLYFNDLEELKIDA-GELKRIR 267
NNS S L+ F+++ HL TL L +N L + + A L+ +R
Sbjct: 784 NNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLR 826
>UNIPROTKB|O88280 [details] [associations]
symbol:Slit3 "Slit homolog 3 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69311 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420 GO:GO:0016020
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 123 (48.4 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 44/165 (26%), Positives = 83/165 (50%)
Query: 15 NFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTE--IPTCPRLRTLFLPSNHLGTVS 72
N + G GLTE P+ + + + L QN+I+++ +L+ + + N + ++
Sbjct: 289 NIVDCRGKGLTEIPA-NLPEGIVEIRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIA 347
Query: 73 NNFFHSMASLRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIE-LKYLVNLK 130
+ F + SL L+L Y + +P G+F+ LVSLQ L ++ I L + + L NL
Sbjct: 348 PDAFQGLKSLTSLVL-YGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLN 406
Query: 131 CLNLEYTFRLSRIPQQVISDLKMLRALRM----FECGFNVELEAD 171
L+L Y +L I + + + L+ ++ L + F C +++ AD
Sbjct: 407 LLSL-YDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLAD 450
Score = 56 (24.8 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 209 SYCRLGSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDLEEL 256
++ + +ST L L + N + V AF LR LR L L+ ND+ +
Sbjct: 794 TFSNMSHLST--LILSY-NRLRCIPVHAFNGLRSLRVLTLHGNDISSV 838
Score = 52 (23.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 227 NNSNS-LSVFAFASLRHLRTLQLYFNDLEELKIDA-GELKRIR 267
NNS S L+ F+++ HL TL L +N L + + A L+ +R
Sbjct: 784 NNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLR 826
>UNIPROTKB|Q9HBX9 [details] [associations]
symbol:RXFP1 "Relaxin receptor 1" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007188
"adenylate cyclase-modulating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007567 "parturition" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0042562
"hormone binding" evidence=IEA] [GO:0060427 "lung connective tissue
development" evidence=IEA] [GO:0060658 "nipple morphogenesis"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=TAS]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002172
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 Pfam:PF00057
PRINTS:PR00237 PRINTS:PR01739 PROSITE:PS00237 PROSITE:PS50068
PROSITE:PS50262 PROSITE:PS51450 SMART:SM00192 GO:GO:0016021
GO:GO:0005886 Reactome:REACT_111102 GO:GO:0030154 GO:GO:0046872
GO:GO:0004930 GO:GO:0007189 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0030198 GO:GO:0042562 EMBL:CH471056
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 GO:GO:0007567 InterPro:IPR000372 SMART:SM00013
GO:GO:0060427 EMBL:AF190500 EMBL:AY899848 EMBL:AY899849
EMBL:AY899850 EMBL:AK300379 EMBL:BC112142 EMBL:BC113617
IPI:IPI00012456 IPI:IPI00219888 IPI:IPI00654878 IPI:IPI00876893
RefSeq:NP_001240657.1 RefSeq:NP_001240658.1 RefSeq:NP_067647.2
UniGene:Hs.591686 PDB:2JM4 PDBsum:2JM4 ProteinModelPortal:Q9HBX9
SMR:Q9HBX9 MINT:MINT-231156 STRING:Q9HBX9 PhosphoSite:Q9HBX9
DMDM:166209887 PRIDE:Q9HBX9 DNASU:59350 Ensembl:ENST00000307765
Ensembl:ENST00000343542 Ensembl:ENST00000423548
Ensembl:ENST00000470033 Ensembl:ENST00000471616 GeneID:59350
KEGG:hsa:59350 UCSC:uc003ipz.3 UCSC:uc010iqm.3 UCSC:uc010iqo.3
CTD:59350 GeneCards:GC04P159236 H-InvDB:HIX0024561 HGNC:HGNC:19718
HPA:HPA027067 MIM:606654 neXtProt:NX_Q9HBX9 PharmGKB:PA134868312
HOVERGEN:HBG026354 InParanoid:Q9HBX9 KO:K04306 OMA:YTLTTRP
PhylomeDB:Q9HBX9 ChEMBL:CHEMBL1293316 EvolutionaryTrace:Q9HBX9
GenomeRNAi:59350 NextBio:65261 ArrayExpress:Q9HBX9 Bgee:Q9HBX9
CleanEx:HS_RXFP1 Genevestigator:Q9HBX9 GermOnline:ENSG00000171509
GO:GO:0060658 Uniprot:Q9HBX9
Length = 757
Score = 128 (50.1 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 49/158 (31%), Positives = 75/158 (47%)
Query: 17 LVLAGVGLTEAPSIGMWKETTRM---SLMQNAIQNLTEIP--TCPRLRTLFLPSNHLGTV 71
LVL LT P + + R+ L N I NL + +C L L + N + +
Sbjct: 227 LVLMNNVLTRLPDKPLCQHMPRLHWLDLEGNHIHNLRNLTFISCSNLTVLVMRKNKINHL 286
Query: 72 SNNFFHSMASLRVLILSYNRSLENLPLGIF-NLVSLQHLDISWTGITTLPI-ELKYLVNL 129
+ N F + L L L N+ +ENLP IF +L L L++S+ I + + YLV L
Sbjct: 287 NENTFAPLQKLDELDLGSNK-IENLPPLIFKDLKELSQLNLSYNPIQKIQANQFDYLVKL 345
Query: 130 KCLNLEYTFRLSRIPQQVISDLKMLRAL--RMFE-CGF 164
K L+LE +S I Q++ L L + + F+ CG+
Sbjct: 346 KSLSLE-GIEISNIQQRMFRPLMNLSHIYFKKFQYCGY 382
>UNIPROTKB|E1BP10 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0033563
"dorsal/ventral axon guidance" evidence=IEA] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IEA] [GO:0022028 "tangential
migration from the subventricular zone to the olfactory bulb"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
OMA:KCVHGKC EMBL:DAAA02058910 IPI:IPI00697614
Ensembl:ENSBTAT00000061296 Uniprot:E1BP10
Length = 1396
Score = 121 (47.7 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 42/159 (26%), Positives = 80/159 (50%)
Query: 21 GVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCP--RLRTLFLPSNHLGTVSNNFFHS 78
G GLT P+ + + T + L N I+++ P +LR + L +N + ++ + F
Sbjct: 159 GKGLTAIPA-NLPEAMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQG 217
Query: 79 MASLRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIE-LKYLVNLKCLNLEY 136
+ SL L+L Y + +LP G+F L +LQ L ++ I + ++ + L NL L+L Y
Sbjct: 218 LRSLNSLVL-YGNKITDLPQGVFGGLFTLQLLLLNANKINCIRLDAFQDLQNLSLLSL-Y 275
Query: 137 TFRLSRIPQQVISDLKMLRALRM----FECGFNVELEAD 171
++ + + + L+ ++ L + F C N++ AD
Sbjct: 276 DNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLAD 314
Score = 57 (25.1 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 209 SYCRLGSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDLEELK 257
S+ + ++T L L + N+ + AF LR LR L L+ ND+ L+
Sbjct: 665 SFTNMSQLTT--LILSY-NSLQCIPPLAFQGLRSLRLLSLHGNDISTLQ 710
Score = 47 (21.6 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 227 NNSNSLSVFAFASLRHLRTLQLYFNDLE 254
N +SLS +F ++ L TL L +N L+
Sbjct: 656 NKISSLSNSSFTNMSQLTTLILSYNSLQ 683
>ZFIN|ZDB-GENE-050522-29 [details] [associations]
symbol:zgc:113307 "zgc:113307" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-050522-29
eggNOG:COG4886 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
HOGENOM:HOG000234447 HOVERGEN:HBG108061 EMBL:BC095895
IPI:IPI00607427 RefSeq:NP_001018560.1 UniGene:Dr.91088
ProteinModelPortal:Q501S3 DNASU:553753 GeneID:553753
KEGG:dre:553753 InParanoid:Q501S3 OrthoDB:EOG4H9XNG
NextBio:20880475 Uniprot:Q501S3
Length = 343
Score = 123 (48.4 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 31/75 (41%), Positives = 45/75 (60%)
Query: 56 PRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSL-ENLPLGIFNLVSLQHLDISW- 113
P ++ L+L +N L +S N H+ + LR L L +N+ E L G FNL SL LD+S+
Sbjct: 211 PSVQQLYLSNNSLTGLSENSLHAFSGLRYLRLGHNKLRNERLDPGAFNLTSLVELDLSYN 270
Query: 114 --TGITTLPIELKYL 126
T I ++PI L+YL
Sbjct: 271 RLTEIPSVPITLQYL 285
>ZFIN|ZDB-GENE-050506-25 [details] [associations]
symbol:lrrc30 "leucine rich repeat containing 30"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-050506-25
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
HOGENOM:HOG000116557 HOVERGEN:HBG099497 EMBL:BC090309
IPI:IPI00993924 UniGene:Dr.88680 ProteinModelPortal:Q5EAP8
STRING:Q5EAP8 InParanoid:Q5EAP8 Uniprot:Q5EAP8
Length = 294
Score = 109 (43.4 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 45/160 (28%), Positives = 80/160 (50%)
Query: 17 LVLAGVGLTEAPSIGMWK--ETTRMSLMQNAIQNLT-EIPTCPRLRTLFLPSNHLGTVSN 73
L LA G+ + P +W+ E +++L N++++L + L L + NHL ++
Sbjct: 49 LSLARRGMADLPE-ELWEITELQKLNLSLNSLRSLPGSLGLLQNLVVLNIWGNHLTSLPP 107
Query: 74 NFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLN 133
+ +L+VL +Y +L +P + L+ L ++ +T LP L LV LK LN
Sbjct: 108 EIGR-LRNLKVLF-AYRNNLSEVPEELCMCSKLEVLSLANNHLTGLPASLSALVGLKKLN 165
Query: 134 LEYTFRLSRIPQQVISDLKMLRALRMFECGFNVELEADSI 173
L + ++ IP V + ++ L L++ C N+E AD I
Sbjct: 166 LSHN-NITHIPGCVYT-MRNLVFLQL-ACN-NLENIADQI 201
Score = 52 (23.4 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 240 LRHLRTLQLYFNDLEELKIDAGELKRIREICGFHSLQK 277
L L L + FND++ + + +LKR+ ++ H L K
Sbjct: 227 LTKLELLNVDFNDIQNVPAEMHKLKRLEKLA-CHPLDK 263
>MGI|MGI:1921738 [details] [associations]
symbol:Lrrc15 "leucine rich repeat containing 15"
species:10090 "Mus musculus" [GO:0005622 "intracellular"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1921738 GO:GO:0016021
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104286 CTD:131578 HOGENOM:HOG000040004
HOVERGEN:HBG052343 OMA:NHLEYIP OrthoDB:EOG4QVCCN EMBL:BC050245
IPI:IPI00330681 RefSeq:NP_083249.1 UniGene:Mm.290677
ProteinModelPortal:Q80X72 SMR:Q80X72 STRING:Q80X72
PhosphoSite:Q80X72 PRIDE:Q80X72 Ensembl:ENSMUST00000064606
GeneID:74488 KEGG:mmu:74488 UCSC:uc007ywn.2 InParanoid:Q80X72
NextBio:340930 Bgee:Q80X72 CleanEx:MM_LRRC15 Genevestigator:Q80X72
GermOnline:ENSMUSG00000052316 Uniprot:Q80X72
Length = 579
Score = 126 (49.4 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 35/126 (27%), Positives = 72/126 (57%)
Query: 38 RMSLMQNAIQNLTE--IPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLEN 95
+++L N+++ L+ P LR L+L +NH+ ++ +N F + L+VLILS+N+ L
Sbjct: 273 KLTLFGNSLKELSPGVFGPMPNLRELWLYNNHITSLPDNAFSHLNQLQVLILSHNQ-LSY 331
Query: 96 LPLGIFN-LVSLQHLDISWTGITTLPIEL-KYLVNLKCLNLEYTFRLSRIPQQVISDLKM 153
+ G FN L +L+ L + + L + + L NL+ ++L+ RL ++P + +++
Sbjct: 332 ISPGAFNGLTNLRELSLHTNALQDLDGNVFRSLANLRNVSLQNN-RLRQLPGSIFANVNG 390
Query: 154 LRALRM 159
L +++
Sbjct: 391 LMTIQL 396
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 73/267 (27%), Positives = 111/267 (41%)
Query: 21 GVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIP-----TCPRLRTLFLPSNHLGTVSNNF 75
G + PS W MSL Q ++TE+P L L + N L +
Sbjct: 41 GAQIVAMPSPLPWNA---MSL-QILNTHITELPEDKFLNISALIALKMEKNELANIMPGA 96
Query: 76 FHSMASLRVLILSYNRSLENLPLGIFNLVS-LQHLDISWTGITTL-PIELKYLVNLKCLN 133
F ++ SLR L L+ N+ L+NLP+ +F V+ L+ L +S + + P + NLK L
Sbjct: 97 FRNLGSLRHLSLANNK-LKNLPVRLFQDVNNLETLLLSNNQLVQIQPAQFSQFSNLKELQ 155
Query: 134 LEYTFRLSRIPQQVISDLKMLRALRMFECGFNVELEADSILFGDSXXXXXXXXXXXXXXX 193
L Y L IP+ V L L L + GF +F
Sbjct: 156 L-YGNNLEYIPEGVFDHLVGLTKLNLGNNGFT---HLSPRVFQHLGNLQVLRLYENRLSD 211
Query: 194 XTI-TLQSFGALQRL-LSYCRLGSIS------TQCLCLRHLNNSN--SLSVFAFASLRHL 243
+ T + G LQ L L ++G++S + L +L+N++ L F L HL
Sbjct: 212 IPMGTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISHLPPGIFMQLPHL 271
Query: 244 RTLQLYFNDLEELKIDA-GELKRIREI 269
L L+ N L+EL G + +RE+
Sbjct: 272 NKLTLFGNSLKELSPGVFGPMPNLREL 298
>RGD|69310 [details] [associations]
symbol:Slit2 "slit homolog 2 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0001656 "metanephros development" evidence=ISO]
[GO:0001657 "ureteric bud development" evidence=ISO] [GO:0001701 "in
utero embryonic development" evidence=ISO] [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0002042
"cell migration involved in sprouting angiogenesis" evidence=ISO]
[GO:0002689 "negative regulation of leukocyte chemotaxis"
evidence=ISO] [GO:0004963 "follicle-stimulating hormone receptor
activity" evidence=IEA] [GO:0005095 "GTPase inhibitor activity"
evidence=ISO] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0006935 "chemotaxis"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=ISO] [GO:0007411
"axon guidance" evidence=ISO] [GO:0007420 "brain development"
evidence=IEP] [GO:0008045 "motor neuron axon guidance" evidence=ISO]
[GO:0008201 "heparin binding" evidence=IEA;ISO] [GO:0008285
"negative regulation of cell proliferation" evidence=ISO]
[GO:0009986 "cell surface" evidence=ISO] [GO:0010593 "negative
regulation of lamellipodium assembly" evidence=ISO] [GO:0010596
"negative regulation of endothelial cell migration" evidence=ISO]
[GO:0010629 "negative regulation of gene expression" evidence=ISO]
[GO:0014912 "negative regulation of smooth muscle cell migration"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=ISO] [GO:0021510 "spinal
cord development" evidence=IEP] [GO:0021772 "olfactory bulb
development" evidence=ISO] [GO:0021836 "chemorepulsion involved in
postnatal olfactory bulb interneuron migration" evidence=ISO]
[GO:0021972 "corticospinal neuron axon guidance through spinal cord"
evidence=ISO] [GO:0022029 "telencephalon cell migration"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030336 "negative regulation of cell migration" evidence=ISO]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=ISO] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=ISO] [GO:0031667 "response to nutrient levels"
evidence=IEP] [GO:0032870 "cellular response to hormone stimulus"
evidence=ISO] [GO:0033563 "dorsal/ventral axon guidance"
evidence=ISO] [GO:0035385 "Roundabout signaling pathway"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic process"
evidence=ISO] [GO:0043116 "negative regulation of vascular
permeability" evidence=ISO] [GO:0043237 "laminin-1 binding"
evidence=ISO] [GO:0043394 "proteoglycan binding" evidence=ISO]
[GO:0043395 "heparan sulfate proteoglycan binding" evidence=IDA]
[GO:0045499 "chemorepellent activity" evidence=ISO] [GO:0048495
"Roundabout binding" evidence=ISO] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=ISO] [GO:0048812
"neuron projection morphogenesis" evidence=ISO] [GO:0048846 "axon
extension involved in axon guidance" evidence=ISO] [GO:0050728
"negative regulation of inflammatory response" evidence=IMP]
[GO:0050919 "negative chemotaxis" evidence=ISO] [GO:0050929
"induction of negative chemotaxis" evidence=ISO] [GO:0051058
"negative regulation of small GTPase mediated signal transduction"
evidence=ISO] [GO:0051414 "response to cortisol stimulus"
evidence=ISO] [GO:0060603 "mammary gland duct morphogenesis"
evidence=ISO] [GO:0060763 "mammary duct terminal end bud growth"
evidence=ISO] [GO:0061364 "apoptotic process involved in luteolysis"
evidence=ISO] [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=ISO] [GO:0071504 "cellular response to
heparin" evidence=ISO] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=ISO] [GO:0071676 "negative
regulation of mononuclear cell migration" evidence=ISO] [GO:0090024
"negative regulation of neutrophil chemotaxis" evidence=ISO]
[GO:0090027 "negative regulation of monocyte chemotaxis"
evidence=IDA] [GO:0090260 "negative regulation of retinal ganglion
cell axon guidance" evidence=ISO] [GO:0090288 "negative regulation
of cellular response to growth factor stimulus" evidence=ISO]
[GO:0021834 "chemorepulsion involved in embryonic olfactory bulb
interneuron precursor migration" evidence=ISO] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR002272 PRINTS:PR01143 PROSITE:PS51450
RGD:69310 GO:GO:0016021 GO:GO:0005886 GO:GO:0005576 GO:GO:0007420
GO:GO:0030154 GO:GO:0050728 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0008201
GO:GO:0006935 GO:GO:0031667 GO:GO:0042699 GO:GO:0043395
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0004963 Pfam:PF01463 GO:GO:0090027 HOVERGEN:HBG057959
EMBL:AF141386 IPI:IPI00361914 UniGene:Rn.146652
ProteinModelPortal:Q9WVC1 SMR:Q9WVC1 IntAct:Q9WVC1 STRING:Q9WVC1
PRIDE:Q9WVC1 HOGENOM:HOG000170672 InParanoid:Q9WVC1
ArrayExpress:Q9WVC1 Genevestigator:Q9WVC1
GermOnline:ENSRNOG00000003840 Uniprot:Q9WVC1
Length = 766
Score = 127 (49.8 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 47/165 (28%), Positives = 82/165 (49%)
Query: 15 NFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCP--RLRTLFLPSNHLGTVS 72
N + G GLTE P+ + + T + L QN+I+ + P +LR L L +N + ++
Sbjct: 286 NIVDCRGKGLTEIPT-NLPETITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELA 344
Query: 73 NNFFHSMASLRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIE-LKYLVNLK 130
+ F + SL L+L Y + LP +F L SLQ L ++ I L ++ + L NL
Sbjct: 345 PDAFQGLRSLNSLVL-YGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLN 403
Query: 131 CLNLEYTFRLSRIPQQVISDLKMLRALRM----FECGFNVELEAD 171
L+L Y +L + + S L+ ++ + + F C +++ AD
Sbjct: 404 LLSL-YDNKLQTVAKGTFSALRAIQTMHLAQNPFICDCHLKWLAD 447
Score = 100 (40.3 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 40/143 (27%), Positives = 64/143 (44%)
Query: 21 GVGLTEAPSIGMWKETTRMSLMQNAIQNLT--EIPTCPRLRTLFLPSNHLGTVSNNFFHS 78
G+ L P + + T R+ L N I +T + LR L L N + T+ FH
Sbjct: 43 GLALRIVPR-NIPRNTERLDLNGNNITRITKTDFAGLRHLRILQLMENKISTIERGAFHD 101
Query: 79 MASLRVLILSYNRSLENLPLGIF-NLVSLQHLDISWTGITTLPIE-LKYLVNLKCLNLEY 136
+ L L L+ N +L+ P +F L LD+S I +P + + V++K L L+Y
Sbjct: 102 LKELERLRLNRN-NLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDY 160
Query: 137 TFRLSRIPQQVISDLKMLRALRM 159
++S I L+ L L +
Sbjct: 161 N-QISCIEDGAFRALRDLEVLTL 182
Score = 73 (30.8 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 24/66 (36%), Positives = 29/66 (43%)
Query: 214 GSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDLEELKIDAGELKRIREICGFH 273
G S Q L L + N N L V AF L +L L LY N L+ + G +R I H
Sbjct: 374 GLFSLQLLLL-NANKINCLRVDAFQDLHNLNLLSLYDNKLQT--VAKGTFSALRAIQTMH 430
Query: 274 SLQKVF 279
Q F
Sbjct: 431 LAQNPF 436
Score = 38 (18.4 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 214 GSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDL 253
G S + L LR N + + +F L +R L LY N +
Sbjct: 600 GLESLKTLMLRS-NRISCVGNDSFTGLGSVRLLSLYDNQI 638
>MGI|MGI:1315202 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0007411
"axon guidance" evidence=ISO;IDA] [GO:0008285 "negative regulation
of cell proliferation" evidence=IGI] [GO:0009887 "organ
morphogenesis" evidence=IGI;IMP] [GO:0010629 "negative regulation
of gene expression" evidence=IGI] [GO:0016020 "membrane"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035385 "Roundabout signaling pathway" evidence=ISO]
[GO:0048495 "Roundabout binding" evidence=ISO] [GO:0048846 "axon
extension involved in axon guidance" evidence=ISO] [GO:0050919
"negative chemotaxis" evidence=ISO] [GO:0070100 "negative
regulation of chemokine-mediated signaling pathway" evidence=ISO]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
MGI:MGI:1315202 GO:GO:0005739 GO:GO:0007411 GO:GO:0008285
GO:GO:0005615 GO:GO:0007420 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186 GO:GO:0032870
GO:GO:0010629 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661 Pfam:PF01463
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 ChiTaRS:SLIT3 EMBL:AF144629
EMBL:AL669839 EMBL:AL669856 EMBL:AL731688 EMBL:AL732401
EMBL:AL732630 IPI:IPI00664551 RefSeq:NP_035542.2 UniGene:Mm.478604
ProteinModelPortal:Q9WVB4 SMR:Q9WVB4 STRING:Q9WVB4
PhosphoSite:Q9WVB4 PRIDE:Q9WVB4 Ensembl:ENSMUST00000069837
GeneID:20564 KEGG:mmu:20564 InParanoid:B1ATW4 OMA:SVDCHGL
NextBio:298861 Bgee:Q9WVB4 CleanEx:MM_SLIT3 Genevestigator:Q9WVB4
GermOnline:ENSMUSG00000056427 Uniprot:Q9WVB4
Length = 1523
Score = 122 (48.0 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 44/165 (26%), Positives = 82/165 (49%)
Query: 15 NFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTE--IPTCPRLRTLFLPSNHLGTVS 72
N + G GLTE P+ + + + L QN+I+++ +L+ + + N + ++
Sbjct: 289 NIVDCRGKGLTEIPA-NLPEGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIA 347
Query: 73 NNFFHSMASLRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIE-LKYLVNLK 130
+ F + SL L+L Y + +P G+F+ LVSLQ L ++ I L + + L NL
Sbjct: 348 PDAFQGLKSLTSLVL-YGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLN 406
Query: 131 CLNLEYTFRLSRIPQQVISDLKMLRALRM----FECGFNVELEAD 171
L+L Y +L I + + L+ ++ L + F C +++ AD
Sbjct: 407 LLSL-YDNKLQTISKGLFVPLQSIQTLHLAQNPFVCDCHLKWLAD 450
Score = 56 (24.8 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 209 SYCRLGSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDLEEL 256
++ + +ST L L + N + V AF LR LR L L+ ND+ +
Sbjct: 794 TFSNMSHLST--LILSY-NRLRCIPVHAFNGLRSLRVLTLHGNDISSV 838
Score = 52 (23.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 227 NNSNS-LSVFAFASLRHLRTLQLYFNDLEELKIDA-GELKRIR 267
NNS S L+ F+++ HL TL L +N L + + A L+ +R
Sbjct: 784 NNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLR 826
>ZFIN|ZDB-GENE-091214-3 [details] [associations]
symbol:lingo4b "leucine rich repeat and Ig domain
containing 4b" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-091214-3 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR003591 SMART:SM00369 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR025875
Pfam:PF12799 HOVERGEN:HBG057546 EMBL:BC171652 IPI:IPI00612243
UniGene:Dr.74856 ProteinModelPortal:B7ZVN7 eggNOG:NOG299566
OMA:IVESEYA OrthoDB:EOG4NZTT6 Uniprot:B7ZVN7
Length = 604
Score = 126 (49.4 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 70/258 (27%), Positives = 113/258 (43%)
Query: 24 LTEAPSIGMWKETTRMSLMQNAIQNLT--EIPTCPRLRTLFLPSNHLGTVSNNFFHSMAS 81
LT P G+ R+ L N ++ L + + +L L L N + + F + +
Sbjct: 49 LTAVPE-GLPTNAKRLDLSGNQLKTLARRQFSSLSKLEDLDLSENIISMIEVETFQGLKN 107
Query: 82 LRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITT-LPIELKYLVNLKCLNLEYTFR 139
LR L + NR L+ LP+G+F+ L +L+ LDIS I L + ++NL+ L+
Sbjct: 108 LRYLRIKNNR-LKILPVGVFSGLSNLRRLDISENEILVFLDYTFRDMINLQQLDAGEN-D 165
Query: 140 LSRIPQQVISDLKMLRALRMFECGF-NVELEADSILFGDSXXXXXXXXXXXXXXXXTITL 198
L I Q+ L+ L+ L + ++ EA S L + L
Sbjct: 166 LVFISQRAFVGLQALKELNVDRSNLTSIPTEALSQLQSLTKLRLRKLTISVLPNNAFRRL 225
Query: 199 QSFGALQRL--LSYCRLGSISTQCLCLRHLNNSN-SLSVFAFASLRHLRTLQ---LYFND 252
LQ L S L S S L L L +N +LS ++ LRHL LQ L +N
Sbjct: 226 HQLRTLQILHWSSLEMLNSNSLVGLNLTTLVLTNCNLSAIPYSPLRHLAYLQYLDLSYNP 285
Query: 253 LEELKIDA-GELKRIREI 269
+ ++ + G+L R++E+
Sbjct: 286 ITSIQGNLLGDLLRLQEL 303
>UNIPROTKB|E7EQW9 [details] [associations]
symbol:ERBB2IP "Protein LAP2" species:9606 "Homo sapiens"
[GO:0005886 "plasma membrane" evidence=IDA] Pfam:PF00595
InterPro:IPR001611 InterPro:IPR001478 PROSITE:PS50106
PROSITE:PS51450 SMART:SM00228 GO:GO:0005886 SUPFAM:SSF50156
InterPro:IPR025875 Pfam:PF12799 EMBL:AC010359 EMBL:AC025442
RefSeq:NP_001240630.1 UniGene:Hs.597241 UniGene:Hs.731734
UniGene:Hs.740465 GeneID:55914 KEGG:hsa:55914 CTD:55914
HGNC:HGNC:15842 KO:K12796 ChiTaRS:ERBB2IP GenomeRNAi:55914
IPI:IPI00966557 ProteinModelPortal:E7EQW9 SMR:E7EQW9
Ensembl:ENST00000511297 UCSC:uc003jul.2 ArrayExpress:E7EQW9
Bgee:E7EQW9 Uniprot:E7EQW9
Length = 1367
Score = 130 (50.8 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 38/126 (30%), Positives = 65/126 (51%)
Query: 24 LTEAPS-IGMWKETTRMSLMQNAIQNLTE-IPTCPRLRTLFLPSNHLGTVSNNFFHSMAS 81
LT P IG K+ T + + +N I+ + E I TC L+ L L SN L + S+ +
Sbjct: 219 LTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETI-GSLKN 277
Query: 82 LRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYTFRLS 141
+ L + N+ L LP I L+S++ LD S+ + LP + L NL+ ++ + L
Sbjct: 278 ITTLKIDENQ-LMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNY-LQ 335
Query: 142 RIPQQV 147
++P ++
Sbjct: 336 QLPPEI 341
>UNIPROTKB|Q96RT1 [details] [associations]
symbol:ERBB2IP "Protein LAP2" species:9606 "Homo sapiens"
[GO:0006605 "protein targeting" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005200 "structural constituent of
cytoskeleton" evidence=NAS] [GO:0007155 "cell adhesion"
evidence=NAS] [GO:0030056 "hemidesmosome" evidence=IDA] [GO:0005178
"integrin binding" evidence=IPI] [GO:0016049 "cell growth"
evidence=NAS] [GO:0007049 "cell cycle" evidence=NAS] [GO:0007173
"epidermal growth factor receptor signaling pathway" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0045175 "basal
protein localization" evidence=NAS] [GO:0045197 "establishment or
maintenance of epithelial cell apical/basal polarity" evidence=NAS]
[GO:0009925 "basal plasma membrane" evidence=NAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0045104 "intermediate filament
cytoskeleton organization" evidence=NAS] [GO:0007229
"integrin-mediated signaling pathway" evidence=NAS] [GO:0005176
"ErbB-2 class receptor binding" evidence=TAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005604 "basement membrane"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA;TAS] Pfam:PF00595
InterPro:IPR001611 InterPro:IPR001478 PROSITE:PS50106
PROSITE:PS51450 SMART:SM00228 GO:GO:0005634 GO:GO:0005737
GO:GO:0006605 Reactome:REACT_111102 GO:GO:0007173 GO:GO:0005200
GO:GO:0016049 GO:GO:0031965 eggNOG:COG4886 GO:GO:0007155
GO:GO:0007049 GO:GO:0007229 SUPFAM:SSF50156 GO:GO:0005604
InterPro:IPR025875 Pfam:PF12799 GO:GO:0009925 GO:GO:0030056
GO:GO:0045104 GO:GO:0005176 GO:GO:0045197 GO:GO:0045175 PDB:1MFG
PDB:1MFL PDBsum:1MFG PDBsum:1MFL EMBL:AF263744 EMBL:AF276423
EMBL:AB033051 EMBL:AK001180 EMBL:AK304693 EMBL:AC010359
EMBL:AC025442 EMBL:BC050692 EMBL:BC115012 EMBL:BC126464
EMBL:BC144075 IPI:IPI00438286 IPI:IPI00438287 IPI:IPI00438288
IPI:IPI00438289 IPI:IPI00438290 IPI:IPI00438291 IPI:IPI00438292
RefSeq:NP_001006600.1 RefSeq:NP_001240626.1 RefSeq:NP_001240627.1
RefSeq:NP_001240628.1 RefSeq:NP_001240630.1 RefSeq:NP_061165.1
UniGene:Hs.597241 UniGene:Hs.731734 UniGene:Hs.740465 PDB:1N7T
PDB:2H3L PDB:2QBW PDB:3CH8 PDBsum:1N7T PDBsum:2H3L PDBsum:2QBW
PDBsum:3CH8 ProteinModelPortal:Q96RT1 SMR:Q96RT1 IntAct:Q96RT1
MINT:MINT-199447 STRING:Q96RT1 PhosphoSite:Q96RT1 DMDM:116242614
PaxDb:Q96RT1 PRIDE:Q96RT1 Ensembl:ENST00000284037
Ensembl:ENST00000380935 Ensembl:ENST00000380936
Ensembl:ENST00000380938 Ensembl:ENST00000380939
Ensembl:ENST00000380943 Ensembl:ENST00000506030
Ensembl:ENST00000508515 GeneID:55914 KEGG:hsa:55914 UCSC:uc003jui.2
UCSC:uc003juj.2 UCSC:uc003juk.2 UCSC:uc011cqy.2 CTD:55914
GeneCards:GC05P065258 HGNC:HGNC:15842 HPA:HPA048606 MIM:606944
neXtProt:NX_Q96RT1 PharmGKB:PA27845 HOGENOM:HOG000060229
HOVERGEN:HBG052305 InParanoid:Q96RT1 KO:K12796 OMA:HNNVRAN
OrthoDB:EOG41JZBG PhylomeDB:Q96RT1 ChiTaRS:ERBB2IP
EvolutionaryTrace:Q96RT1 GenomeRNAi:55914 NextBio:61305
ArrayExpress:Q96RT1 Bgee:Q96RT1 CleanEx:HS_ERBB2IP
Genevestigator:Q96RT1 GermOnline:ENSG00000112851 Uniprot:Q96RT1
Length = 1412
Score = 130 (50.8 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 38/126 (30%), Positives = 65/126 (51%)
Query: 24 LTEAPS-IGMWKETTRMSLMQNAIQNLTE-IPTCPRLRTLFLPSNHLGTVSNNFFHSMAS 81
LT P IG K+ T + + +N I+ + E I TC L+ L L SN L + S+ +
Sbjct: 219 LTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETI-GSLKN 277
Query: 82 LRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYTFRLS 141
+ L + N+ L LP I L+S++ LD S+ + LP + L NL+ ++ + L
Sbjct: 278 ITTLKIDENQ-LMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNY-LQ 335
Query: 142 RIPQQV 147
++P ++
Sbjct: 336 QLPPEI 341
>UNIPROTKB|F1NRN7 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9031 "Gallus gallus" [GO:0000164 "protein phosphatase type
1 complex" evidence=IEA] [GO:0046579 "positive regulation of Ras
protein signal transduction" evidence=IEA] InterPro:IPR001611
InterPro:IPR027036 PROSITE:PS51450 InterPro:IPR003591 SMART:SM00369
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00600000084236
PANTHER:PTHR23155:SF38 IPI:IPI00600917 EMBL:AADN02030891
Ensembl:ENSGALT00000014266 Uniprot:F1NRN7
Length = 529
Score = 119 (46.9 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 69/260 (26%), Positives = 116/260 (44%)
Query: 5 IASTINK-EKENF--LVLAGVGLTEAPS-IGMWKETTRMSLMQNAIQNL-TEIPTCPRLR 59
+ +NK +EN L LA + PS + + T + L N +Q+L E+ L
Sbjct: 90 VIKELNKCREENSMRLDLAKRSIHMLPSAVKELTQLTELYLYSNKLQSLPAEVGCLVNLV 149
Query: 60 TLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTL 119
TL L N L ++ ++ ++ LR+L L +N+ L +P ++ L SL L + + ITT+
Sbjct: 150 TLALSENSLTSLPDSL-DNLKKLRMLDLRHNK-LREIPSVVYRLTSLATLYLRFNRITTV 207
Query: 120 PIELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRALRMFECGFNVELEADSILFGDSX 179
++K L L L++ ++ ++P + I +L L L + N +LE G
Sbjct: 208 EKDIKNLSKLTMLSIREN-KIKQLPAE-IGELCNLITL---DVAHN-QLEHLPEEIGSCT 261
Query: 180 XXXXXXXXXXXXXXXTITLQSFGALQRL-LSYCRLGSIS---TQCLCLRHLN-NSNSLSV 234
T+ + +L RL L Y RL +I +C L LN +N++S
Sbjct: 262 QITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNIST 321
Query: 235 FA---FASLRHLRTLQLYFN 251
+SL L +L L N
Sbjct: 322 LPEGLLSSLVKLTSLTLARN 341
Score = 48 (22.0 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 18/69 (26%), Positives = 35/69 (50%)
Query: 238 ASLRHLRTLQLYFNDLEELKIDAGELKRIREI-CGFHSLQKVFYKILKI-EARDMACTCS 295
+ L L L L N L++L G L+++RE+ + L+ + +I + + + + T +
Sbjct: 422 SGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNN 481
Query: 296 QYQACPRGL 304
Q PRG+
Sbjct: 482 QLTTLPRGI 490
>UNIPROTKB|Q5F4C4 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9031 "Gallus gallus" [GO:0046579 "positive regulation of
Ras protein signal transduction" evidence=ISS] [GO:0019903 "protein
phosphatase binding" evidence=ISS] [GO:0000164 "protein phosphatase
type 1 complex" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR001611
InterPro:IPR027036 PROSITE:PS51450 GO:GO:0005634 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HSSP:P07359
HOGENOM:HOG000116557 CTD:8036 PANTHER:PTHR23155:SF38 EMBL:AJ851376
IPI:IPI00600917 RefSeq:NP_001026407.1 UniGene:Gga.42449
ProteinModelPortal:Q5F4C4 GeneID:423894 KEGG:gga:423894
NextBio:20826295 Uniprot:Q5F4C4
Length = 529
Score = 119 (46.9 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 69/260 (26%), Positives = 116/260 (44%)
Query: 5 IASTINK-EKENF--LVLAGVGLTEAPS-IGMWKETTRMSLMQNAIQNL-TEIPTCPRLR 59
+ +NK +EN L LA + PS + + T + L N +Q+L E+ L
Sbjct: 90 VIKELNKCREENSMRLDLAKRSIHMLPSAVKELTQLTELYLYSNKLQSLPAEVGCLVNLV 149
Query: 60 TLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTL 119
TL L N L ++ ++ ++ LR+L L +N+ L +P ++ L SL L + + ITT+
Sbjct: 150 TLALSENSLTSLPDSL-DNLKKLRMLDLRHNK-LREIPSVVYRLTSLATLYLRFNRITTV 207
Query: 120 PIELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRALRMFECGFNVELEADSILFGDSX 179
++K L L L++ ++ ++P + I +L L L + N +LE G
Sbjct: 208 EKDIKTLSKLTMLSIREN-KIKQLPAE-IGELCNLITL---DVAHN-QLEHLPEEIGSCT 261
Query: 180 XXXXXXXXXXXXXXXTITLQSFGALQRL-LSYCRLGSIS---TQCLCLRHLN-NSNSLSV 234
T+ + +L RL L Y RL +I +C L LN +N++S
Sbjct: 262 QITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNIST 321
Query: 235 FA---FASLRHLRTLQLYFN 251
+SL L +L L N
Sbjct: 322 LPEGLLSSLVKLTSLTLARN 341
Score = 48 (22.0 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 18/69 (26%), Positives = 35/69 (50%)
Query: 238 ASLRHLRTLQLYFNDLEELKIDAGELKRIREI-CGFHSLQKVFYKILKI-EARDMACTCS 295
+ L L L L N L++L G L+++RE+ + L+ + +I + + + + T +
Sbjct: 422 SGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNN 481
Query: 296 QYQACPRGL 304
Q PRG+
Sbjct: 482 QLTTLPRGI 490
>ZFIN|ZDB-GENE-041008-23 [details] [associations]
symbol:fmoda "fibromodulin a" species:7955 "Danio
rerio" [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001611 InterPro:IPR027215 PROSITE:PS51450
ZFIN:ZDB-GENE-041008-23 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000234447
HOVERGEN:HBG108061 PANTHER:PTHR24371:SF11 EMBL:BC096939
IPI:IPI00487287 RefSeq:NP_001025243.1 UniGene:Dr.133900
ProteinModelPortal:Q4V9E0 STRING:Q4V9E0 GeneID:791822
KEGG:dre:791822 CTD:791822 InParanoid:Q4V9E0 NextBio:20930800
Uniprot:Q4V9E0
Length = 342
Score = 122 (48.0 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 35/113 (30%), Positives = 62/113 (54%)
Query: 48 NLTEIPT-CPR-LRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVS 105
NLTE+P+ PR LR L L N +G ++ N F M +L +L+L +N SL+++ +G+ L S
Sbjct: 132 NLTEVPSNLPRSLRDLRLNHNKIGKLAPNAFEGMENLTILLLHHN-SLQDIGVGLKGLKS 190
Query: 106 LQHLDISWTGITTLPIELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRALR 158
L LD+S + +P L +++ L+ + +P ++ L+ +R
Sbjct: 191 LTLLDVSRNQLKKVPESLPEMLHQLYLDSN---SIGAVPANFLNQFSNLQYVR 240
>UNIPROTKB|P22792 [details] [associations]
symbol:CPN2 "Carboxypeptidase N subunit 2" species:9606
"Homo sapiens" [GO:0050821 "protein stabilization" evidence=NAS]
[GO:0005576 "extracellular region" evidence=NAS] [GO:0030234
"enzyme regulator activity" evidence=NAS] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0030234 GO:GO:0005576
GO:GO:0050821 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 CTD:1370 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 EMBL:AC125362
EMBL:J05158 EMBL:AC174158 EMBL:BC031569 EMBL:BC042334 EMBL:BC137398
EMBL:BC137403 IPI:IPI00479116 PIR:A34901 RefSeq:NP_001073982.2
UniGene:Hs.528368 ProteinModelPortal:P22792 SMR:P22792
STRING:P22792 DMDM:52788240 PaxDb:P22792 PRIDE:P22792
Ensembl:ENST00000323830 Ensembl:ENST00000429275 GeneID:1370
KEGG:hsa:1370 UCSC:uc003fts.3 GeneCards:GC03M194060
H-InvDB:HIX0030813 HGNC:HGNC:2313 HPA:HPA004732 MIM:603104
neXtProt:NX_P22792 PharmGKB:PA26830 HOGENOM:HOG000294123
HOVERGEN:HBG050814 InParanoid:P22792 KO:K13023 OMA:WQCDCHL
OrthoDB:EOG4WM4TF BindingDB:P22792 ChEMBL:CHEMBL3685
GenomeRNAi:1370 NextBio:5553 Bgee:P22792 CleanEx:HS_CPN2
Genevestigator:P22792 GermOnline:ENSG00000178772 Uniprot:P22792
Length = 545
Score = 125 (49.1 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 35/106 (33%), Positives = 59/106 (55%)
Query: 56 PRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLPLGIF-NLVSLQHLDISWT 114
PRL L + + +S N F ++ SL L L++N LE LP G+F +L +L+ L +
Sbjct: 97 PRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFNM-LEALPEGLFQHLAALESLHLQGN 155
Query: 115 GITTLPIEL-KYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRALRM 159
+ LP L + L +LK LNL L+++P+++ L L+ L++
Sbjct: 156 QLQALPRRLFQPLTHLKTLNLAQNL-LAQLPEELFHPLTSLQTLKL 200
>UNIPROTKB|F1RR92 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=IEA] [GO:0061364 "apoptotic process
involved in luteolysis" evidence=IEA] [GO:0051414 "response to
cortisol stimulus" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0008285
GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0050919 GO:GO:0035385 GO:GO:0061364 OMA:SVDCHGL EMBL:CU640426
Ensembl:ENSSSCT00000018524 Uniprot:F1RR92
Length = 1340
Score = 125 (49.1 bits), Expect = 8.5e-05, Sum P(3) = 8.5e-05
Identities = 44/165 (26%), Positives = 83/165 (50%)
Query: 15 NFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTE--IPTCPRLRTLFLPSNHLGTVS 72
N + G GLTE P+ + + + L QN+I+++ +L+ + + N + ++
Sbjct: 103 NIVDCRGKGLTEIPA-NLPEGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIA 161
Query: 73 NNFFHSMASLRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIE-LKYLVNLK 130
+ F + SL L+L Y + +P G+F+ LVSLQ L ++ I L + + L NL
Sbjct: 162 ADAFQGLKSLTSLVL-YGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLN 220
Query: 131 CLNLEYTFRLSRIPQQVISDLKMLRALRM----FECGFNVELEAD 171
L+L Y +L I + + + L+ ++ L + F C +++ AD
Sbjct: 221 LLSL-YDNKLQTISKGLFAPLQAIQTLHLAQNPFVCDCHLKWLAD 264
Score = 54 (24.1 bits), Expect = 8.5e-05, Sum P(3) = 8.5e-05
Identities = 17/57 (29%), Positives = 28/57 (49%)
Query: 200 SFGALQRLLSYCRLGSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDLEEL 256
S G L ++ + +ST L L + N + + +F LR LR L L+ ND+ +
Sbjct: 603 SIGMLTNY-TFSNMSHLST--LILSY-NRLRCIPIHSFNGLRSLRVLTLHGNDISSV 655
Score = 52 (23.4 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 227 NNS-NSLSVFAFASLRHLRTLQLYFNDLEELKIDA-GELKRIR 267
NNS L+ + F+++ HL TL L +N L + I + L+ +R
Sbjct: 601 NNSIGMLTNYTFSNMSHLSTLILSYNRLRCIPIHSFNGLRSLR 643
Score = 38 (18.4 bits), Expect = 8.5e-05, Sum P(3) = 8.5e-05
Identities = 10/38 (26%), Positives = 15/38 (39%)
Query: 280 YKILKIEARDMACTCSQYQACPRGLTKFEEHPLKRLEC 317
+K L +A ++ C C GL + E EC
Sbjct: 1135 FKALPPQALGVSPGCKSCSVCKHGLCRAVEKDSVVCEC 1172
>MGI|MGI:1919517 [details] [associations]
symbol:Lrrc8e "leucine rich repeat containing 8 family,
member E" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:1919517 GO:GO:0016021 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GeneTree:ENSGT00600000084236 HOGENOM:HOG000231806
HOVERGEN:HBG052360 InterPro:IPR021040 Pfam:PF12534
OrthoDB:EOG4N8R44 CTD:80131 OMA:FINQLCY EMBL:AC123029 EMBL:BC080783
IPI:IPI00119720 RefSeq:NP_082451.2 UniGene:Mm.25479
ProteinModelPortal:Q66JT1 SMR:Q66JT1 PhosphoSite:Q66JT1
PRIDE:Q66JT1 Ensembl:ENSMUST00000053035 GeneID:72267 KEGG:mmu:72267
UCSC:uc009kth.2 InParanoid:Q66JT1 NextBio:335853 Bgee:Q66JT1
CleanEx:MM_LRRC8E Genevestigator:Q66JT1
GermOnline:ENSMUSG00000046589 Uniprot:Q66JT1
Length = 795
Score = 127 (49.8 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 51/156 (32%), Positives = 77/156 (49%)
Query: 17 LVLAGVGLTEAP----SIGMWKETTRMSLMQNAIQNLTEIPT---CPRLRTLFLPSNHLG 69
L L GL P S+G +E + L N ++++ EI + C +L TL L N +
Sbjct: 586 LELVACGLERIPHAIFSLGALQE---LDLKDNHLRSIEEILSFQHCRKLVTLRLWHNQIA 642
Query: 70 TVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNL 129
V + + SL L LS+N+ LE LP + L+ LD+S G+ +LP EL L +L
Sbjct: 643 YVPEHV-RKLRSLEQLYLSHNK-LETLPTQLGQCFGLRLLDLSHNGLRSLPPELGLLQSL 700
Query: 130 KCLNLEYTFRLSRIPQQVISDLKMLRALRMFECGFN 165
+ L L Y L +P ++ K LR L + G+N
Sbjct: 701 QHLALSYN-ALESLPDELFFCHK-LRTLLL---GYN 731
>ZFIN|ZDB-GENE-061013-487 [details] [associations]
symbol:lrrc8db "leucine rich repeat containing 8
family, member Db" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-061013-487 eggNOG:COG4886 HOGENOM:HOG000231806
HOVERGEN:HBG052360 InterPro:IPR021040 Pfam:PF12534 OMA:AFSFLRD
EMBL:BC124653 IPI:IPI00798760 RefSeq:NP_001070848.1
UniGene:Dr.87907 GeneID:563923 KEGG:dre:563923 CTD:563923
InParanoid:Q08BM6 NextBio:20885138 Uniprot:Q08BM6
Length = 841
Score = 127 (49.8 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 38/124 (30%), Positives = 68/124 (54%)
Query: 39 MSLMQNAIQNLTEIPT---CPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLEN 95
+ L N I+ + E+ + RL L L N + ++ + H + +L L LS+N+ LE+
Sbjct: 646 LDLKSNNIRTIEEVISFQHLKRLNCLKLWHNKIISIPLSISH-VKNLEFLYLSHNK-LES 703
Query: 96 LPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLR 155
LP +FNL+ L++LD+S I +P E+ +L NL+ + ++ +P+Q+ K LR
Sbjct: 704 LPTTLFNLLKLRYLDVSHNSIVVIPPEVGFLQNLQHFAITGN-KVEVVPKQLFKCTK-LR 761
Query: 156 ALRM 159
L +
Sbjct: 762 TLSL 765
>UNIPROTKB|F1NF14 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0009887 "organ
morphogenesis" evidence=IEA] [GO:0010629 "negative regulation of
gene expression" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0032870 "cellular response to
hormone stimulus" evidence=IEA] [GO:0035385 "Roundabout signaling
pathway" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0051414 "response to cortisol stimulus"
evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0008285 GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0070100
Pfam:PF12661 Pfam:PF01463 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050919 GO:GO:0035385
OMA:SVDCHGL EMBL:AADN02035923 IPI:IPI00587174
Ensembl:ENSGALT00000002967 ArrayExpress:F1NF14 Uniprot:F1NF14
Length = 1338
Score = 121 (47.7 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 45/165 (27%), Positives = 83/165 (50%)
Query: 15 NFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTE--IPTCPRLRTLFLPSNHLGTVS 72
N + G GLTE P+ + ++ + L QN I+ + +L+ + + N + ++
Sbjct: 103 NVVDCRGRGLTEIPA-NLPEDIWEIRLEQNLIKVIPPGAFTQYKKLKRIDISKNQISEIA 161
Query: 73 NNFFHSMASLRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIE-LKYLVNLK 130
+ F + SL L+L Y + +P G+F+ LVSLQ L ++ I L + + L NLK
Sbjct: 162 PDAFKGLKSLISLVL-YGNKITEIPQGLFDDLVSLQLLLLNANKINCLRVNTFQGLHNLK 220
Query: 131 CLNLEYTFRLSRIPQQVISDLKMLRALRM----FECGFNVELEAD 171
L+L Y +L I + + + L+ ++ L + F C +++ AD
Sbjct: 221 LLSL-YDNKLQTISKGLFAPLRSIQTLHLAQNPFVCDCHLKWLAD 264
Score = 55 (24.4 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 209 SYCRLGSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDLEEL 256
++ + +ST L L + N + V AF LR LR L L+ ND+ +
Sbjct: 608 TFSNMTQLST--LILSY-NRLRCIPVHAFNGLRSLRVLTLHGNDISSV 652
Score = 47 (21.6 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 23/94 (24%), Positives = 42/94 (44%)
Query: 214 GSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDLE---ELKIDAGELKRIREIC 270
G S + L L + N+ ++++ AF++L L T+ L N L L++ R +
Sbjct: 441 GLSSVRLLSL-YDNHISTITPGAFSTLVSLSTINLLANSFNCNCHLAWLGKWLRKKRIVS 499
Query: 271 GFHSLQKVFY----KILKIEARDMACTCSQYQAC 300
G K F+ I ++A+D C + +C
Sbjct: 500 GNPRCLKPFFLKDIPIQDVDAQDFTCEGNDESSC 533
>UNIPROTKB|F1MMM6 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=IEA] [GO:0061364 "apoptotic process
involved in luteolysis" evidence=IEA] [GO:0051414 "response to
cortisol stimulus" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0008285
GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 OMA:SVDCHGL EMBL:DAAA02049822
EMBL:DAAA02049823 EMBL:DAAA02049824 EMBL:DAAA02049825
EMBL:DAAA02049826 EMBL:DAAA02049827 IPI:IPI01017433
Ensembl:ENSBTAT00000049620 Uniprot:F1MMM6
Length = 1339
Score = 119 (46.9 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 43/165 (26%), Positives = 82/165 (49%)
Query: 15 NFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTE--IPTCPRLRTLFLPSNHLGTVS 72
N + G GLTE P+ + + + L QN+I+++ +L+ + + N + ++
Sbjct: 103 NIVDCRGKGLTEIPA-NLPEGIVEIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIA 161
Query: 73 NNFFHSMASLRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIE-LKYLVNLK 130
+ F + SL L+L Y + +P G+F+ LVSLQ L ++ I L + + L +L
Sbjct: 162 PDAFQGLKSLTSLVL-YGNKITEIPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQSLS 220
Query: 131 CLNLEYTFRLSRIPQQVISDLKMLRALRM----FECGFNVELEAD 171
L+L Y +L I + + + L+ ++ L + F C ++ AD
Sbjct: 221 LLSL-YDNKLQTISKGLFAPLQAIQTLHLAQNPFVCDCHLRWLAD 264
Score = 57 (25.1 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 27/109 (24%), Positives = 44/109 (40%)
Query: 200 SFGALQRLLSYCRLGSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDLEELKID 259
S G L ++ + +ST L L + N + V +F LR LR L L+ ND+ +
Sbjct: 600 SIGMLTNY-TFSNMSHLST--LILSY-NRLRCIPVHSFNGLRSLRVLTLHGNDISS--VP 653
Query: 260 AGELKRIREICGFHSLQKVFYKILKIEARDMACTCSQYQACPRGLTKFE 308
G + + H L F + C S+Y G ++F+
Sbjct: 654 EGSFNDLTSLS--HLLLHTF----PMNYNSSICQLSRYITPFNGYSEFQ 696
Score = 51 (23.0 bits), Expect = 0.00093, Sum P(3) = 0.00093
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 227 NNS-NSLSVFAFASLRHLRTLQLYFNDLEELKIDA-GELKRIR 267
NNS L+ + F+++ HL TL L +N L + + + L+ +R
Sbjct: 598 NNSIGMLTNYTFSNMSHLSTLILSYNRLRCIPVHSFNGLRSLR 640
Score = 37 (18.1 bits), Expect = 0.00093, Sum P(3) = 0.00093
Identities = 10/38 (26%), Positives = 15/38 (39%)
Query: 280 YKILKIEARDMACTCSQYQACPRGLTKFEEHPLKRLEC 317
+K L +A ++ C C GL + E EC
Sbjct: 1134 FKALPPQALGVSPGCKSCSVCRHGLCRAVEKDSVVCEC 1171
>DICTYBASE|DDB_G0291532 [details] [associations]
symbol:DDB_G0291532 species:44689 "Dictyostelium
discoideum" [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001611 PROSITE:PS51450 dictyBase:DDB_G0291532
EMBL:AAFI02000177 eggNOG:COG4886 InterPro:IPR025875 Pfam:PF12799
RefSeq:XP_635280.1 ProteinModelPortal:Q54EG0
EnsemblProtists:DDB0183955 GeneID:8628224 KEGG:ddi:DDB_G0291532
InParanoid:Q54EG0 OMA:CIVDISP ProtClustDB:CLSZ2728757
Uniprot:Q54EG0
Length = 285
Score = 120 (47.3 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 40/133 (30%), Positives = 66/133 (49%)
Query: 28 PSIGMWKETTRMSLMQNAIQNLT-EIPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLI 86
P+IG K T ++L N+++ L EI L ++ L N L + F S L L
Sbjct: 55 PAIGNLKNLTLLNLFNNSLRELPHEITQLVNLESMNLSINKLKALPRGF-GSFNHLFFLD 113
Query: 87 LSYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYTFRLSRIPQQ 146
+SYN S+ L I + +L+ L IS+ +T LP+EL L+ +N + ++ +P +
Sbjct: 114 VSYN-SITELTTQIGLISTLKELHISFNELTELPVELSRCSELEVINASHN-KILELPSE 171
Query: 147 VISDLKMLRALRM 159
S L L+ L +
Sbjct: 172 -FSKLPKLKLLNI 183
>UNIPROTKB|F1NHG5 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0002042 "cell migration
involved in sprouting angiogenesis" evidence=IEA] [GO:0005095
"GTPase inhibitor activity" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0010593
"negative regulation of lamellipodium assembly" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0021836 "chemorepulsion involved in postnatal olfactory bulb
interneuron migration" evidence=IEA] [GO:0021972 "corticospinal
neuron axon guidance through spinal cord" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030837
"negative regulation of actin filament polymerization"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043116 "negative regulation of vascular
permeability" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0050929 "induction of negative chemotaxis" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0051414 "response to cortisol
stimulus" evidence=IEA] [GO:0060763 "mammary duct terminal end bud
growth" evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0071504
"cellular response to heparin" evidence=IEA] [GO:0071672 "negative
regulation of smooth muscle cell chemotaxis" evidence=IEA]
[GO:0071676 "negative regulation of mononuclear cell migration"
evidence=IEA] [GO:0090024 "negative regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0090260 "negative regulation of
retinal ganglion cell axon guidance" evidence=IEA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
GO:GO:0008285 GO:GO:0005615 GO:GO:0009986 GO:GO:0030308
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0008201 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0071504 GO:GO:0005095
GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837
GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791 Pfam:PF00054
SMART:SM00274 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0010596 GO:GO:0001933
GO:GO:0071676 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0070100 GO:GO:0090288 GO:GO:0045499
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050929 GO:GO:0090024
GO:GO:0051058 OMA:RHKMFKG EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00883181 Ensembl:ENSGALT00000023294 ArrayExpress:F1NHG5
Uniprot:F1NHG5
Length = 1525
Score = 134 (52.2 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 49/165 (29%), Positives = 82/165 (49%)
Query: 15 NFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCP--RLRTLFLPSNHLGTVS 72
N + G GLTE P+ + + T + L QN+I+ + P +LR + L +N + +
Sbjct: 278 NIVDCRGKGLTEIPT-NLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAA 336
Query: 73 NNFFHSMASLRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIE-LKYLVNLK 130
+ F + SL L+L Y + LP G+F L SLQ L ++ I L ++ + L NL
Sbjct: 337 PDAFQGLRSLNSLVL-YGNKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLN 395
Query: 131 CLNLEYTFRLSRIPQQVISDLKMLRALRM----FECGFNVELEAD 171
L+L Y +L I + S L+ ++ L + F C +++ AD
Sbjct: 396 LLSL-YDNKLQTIAKGTFSPLRAIQTLHLAQNPFICDCHLKWLAD 439
Score = 42 (19.8 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 218 TQCLCL-RHLNNSNSLSVFAFASLRHLRTLQLYFNDL 253
TQ L L N + F L+ LR L L+ ND+
Sbjct: 797 TQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDI 833
Score = 39 (18.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 214 GSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDL 253
G S + L LR N + + +F L +R L LY N +
Sbjct: 600 GLESLKTLMLRS-NRVSCVGNDSFTGLSSVRLLSLYDNQI 638
>UNIPROTKB|E1BU15 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9031 "Gallus gallus" [GO:0000164 "protein phosphatase type
1 complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0019903 "protein phosphatase binding" evidence=IEA] [GO:0046579
"positive regulation of Ras protein signal transduction"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036
PROSITE:PS51450 GO:GO:0005634 InterPro:IPR003591 SMART:SM00369
InterPro:IPR025875 Pfam:PF12799 GO:GO:0046579 GO:GO:0000164
GeneTree:ENSGT00600000084236 OMA:LPHGIGN PANTHER:PTHR23155:SF38
EMBL:AADN02030891 IPI:IPI00571083 Ensembl:ENSGALT00000014267
Uniprot:E1BU15
Length = 582
Score = 119 (46.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 69/260 (26%), Positives = 116/260 (44%)
Query: 5 IASTINK-EKENF--LVLAGVGLTEAPS-IGMWKETTRMSLMQNAIQNL-TEIPTCPRLR 59
+ +NK +EN L LA + PS + + T + L N +Q+L E+ L
Sbjct: 90 VIKELNKCREENSMRLDLAKRSIHMLPSAVKELTQLTELYLYSNKLQSLPAEVGCLVNLV 149
Query: 60 TLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTL 119
TL L N L ++ ++ ++ LR+L L +N+ L +P ++ L SL L + + ITT+
Sbjct: 150 TLALSENSLTSLPDSL-DNLKKLRMLDLRHNK-LREIPSVVYRLTSLATLYLRFNRITTV 207
Query: 120 PIELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRALRMFECGFNVELEADSILFGDSX 179
++K L L L++ ++ ++P + I +L L L + N +LE G
Sbjct: 208 EKDIKNLSKLTMLSIREN-KIKQLPAE-IGELCNLITL---DVAHN-QLEHLPEEIGSCT 261
Query: 180 XXXXXXXXXXXXXXXTITLQSFGALQRL-LSYCRLGSIS---TQCLCLRHLN-NSNSLSV 234
T+ + +L RL L Y RL +I +C L LN +N++S
Sbjct: 262 QITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNIST 321
Query: 235 FA---FASLRHLRTLQLYFN 251
+SL L +L L N
Sbjct: 322 LPEGLLSSLVKLTSLTLARN 341
Score = 48 (22.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 18/69 (26%), Positives = 35/69 (50%)
Query: 238 ASLRHLRTLQLYFNDLEELKIDAGELKRIREI-CGFHSLQKVFYKILKI-EARDMACTCS 295
+ L L L L N L++L G L+++RE+ + L+ + +I + + + + T +
Sbjct: 422 SGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNN 481
Query: 296 QYQACPRGL 304
Q PRG+
Sbjct: 482 QLTTLPRGI 490
>UNIPROTKB|Q5T0V0 [details] [associations]
symbol:SLIT1 "Slit homolog 1 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 Pfam:PF02210
Pfam:PF12661 Pfam:PF01463 EMBL:AL442123 EMBL:AL512424
IPI:IPI00871419 UniGene:Hs.632082 HGNC:HGNC:11085
HOGENOM:HOG000116120 HOVERGEN:HBG057959 ChiTaRS:SLIT1 SMR:Q5T0V0
STRING:Q5T0V0 Ensembl:ENST00000371070 Uniprot:Q5T0V0
Length = 1461
Score = 122 (48.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 43/159 (27%), Positives = 79/159 (49%)
Query: 21 GVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCP--RLRTLFLPSNHLGTVSNNFFHS 78
G GLT P+ + + T + L N I+++ P +LR + L +N + ++ + F
Sbjct: 297 GKGLTAIPA-NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQG 355
Query: 79 MASLRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTL-PIELKYLVNLKCLNLEY 136
+ SL L+L Y + +LP G+F L +LQ L ++ I + P + L NL L+L Y
Sbjct: 356 LRSLNSLVL-YGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSL-Y 413
Query: 137 TFRLSRIPQQVISDLKMLRALRM----FECGFNVELEAD 171
++ + + + L+ ++ L + F C N++ AD
Sbjct: 414 DNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLAD 452
Score = 102 (41.0 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 42/143 (29%), Positives = 64/143 (44%)
Query: 21 GVGLTEAPSIGMWKETTRMSLMQNAIQNL--TEIPTCPRLRTLFLPSNHLGTVSNNFFHS 78
G GL P + + T R+ L N I + + +LR L L N +G V F
Sbjct: 49 GTGLQAIPK-NIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDD 107
Query: 79 MASLRVLILSYNRSLENLPLGIF-NLVSLQHLDISWTGITTLPIE-LKYLVNLKCLNLEY 136
M L L L+ N+ L LP +F N +L LD+S I +P + + +LK L L+
Sbjct: 108 MKELERLRLNRNQ-LHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDK 166
Query: 137 TFRLSRIPQQVISDLKMLRALRM 159
++S I + L+ L L +
Sbjct: 167 N-QISCIEEGAFRALRGLEVLTL 188
Score = 67 (28.6 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 21/66 (31%), Positives = 29/66 (43%)
Query: 214 GSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDLEELKIDAGELKRIREICGFH 273
G + T L L + N N + AF L++L L LY N ++ L G +R I H
Sbjct: 378 GGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLA--KGTFTSLRAIQTLH 435
Query: 274 SLQKVF 279
Q F
Sbjct: 436 LAQNPF 441
Score = 54 (24.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 209 SYCRLGSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDLEELK 257
S+ + ++T L L + N + AF LR LR L L+ ND+ L+
Sbjct: 803 SFTNMSQLTT--LILSY-NALQCIPPLAFQGLRSLRLLSLHGNDISTLQ 848
Score = 50 (22.7 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 214 GSIST-QCLCLRHLNNS--NSLSVFAFASLRHLRTLQLYFNDLE 254
G +ST + L L L+N+ +SLS +F ++ L TL L +N L+
Sbjct: 778 GQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQ 821
Score = 45 (20.9 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 221 LCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDL 253
L LR+ N + + +F LR++R L LY N +
Sbjct: 618 LMLRN-NRISCIHNDSFTGLRNVRLLSLYDNQI 649
>TAIR|locus:2010326 [details] [associations]
symbol:PIRL3 "AT1G12970" species:3702 "Arabidopsis
thaliana" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IDA] [GO:0046777 "protein autophosphorylation"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0004674 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0046777 InterPro:IPR025875
Pfam:PF12799 HSSP:P07359 HOGENOM:HOG000239210
ProtClustDB:CLSN2686671 EMBL:AY062103 EMBL:AY124880 EMBL:AY849573
IPI:IPI00528676 RefSeq:NP_563921.1 UniGene:At.27354
ProteinModelPortal:Q8W4Q3 SMR:Q8W4Q3 PaxDb:Q8W4Q3 PRIDE:Q8W4Q3
EnsemblPlants:AT1G12970.1 GeneID:837855 KEGG:ath:AT1G12970
TAIR:At1g12970 InParanoid:Q8W4Q3 OMA:WEEMVEE PhylomeDB:Q8W4Q3
Genevestigator:Q8W4Q3 Uniprot:Q8W4Q3
Length = 464
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 48/149 (32%), Positives = 70/149 (46%)
Query: 12 EKENFLVLAGVGLTEAP-SIGMWKETTRMSLMQNAIQNLTE-IPTCPRLRTLFLPSNHLG 69
EK L L+ L P SIG+ +++ N + L E I C L L N+L
Sbjct: 207 EKLEELDLSSNRLVFLPDSIGLLLNLRILNVTGNKLTLLPESIAQCRSLVELDASFNNLT 266
Query: 70 TVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNL 129
++ NF + + +L L + N+ + P I + SL++LD I LPI + L NL
Sbjct: 267 SLPANFGYGLLNLERLSIQLNK-IRFFPNSICEMRSLRYLDAHMNEIHGLPIAIGRLTNL 325
Query: 130 KCLNLEYTFR-LSRIPQQVISDLKMLRAL 157
+ +NL F L +P ISDL LR L
Sbjct: 326 EVMNLSSNFSDLIELPD-TISDLANLREL 353
>UNIPROTKB|F1PE17 [details] [associations]
symbol:RXFP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060658 "nipple morphogenesis" evidence=IEA]
[GO:0060427 "lung connective tissue development" evidence=IEA]
[GO:0042562 "hormone binding" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007567 "parturition"
evidence=IEA] [GO:0007188 "adenylate cyclase-modulating G-protein
coupled receptor signaling pathway" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR008112 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR01739 PROSITE:PS50262
PROSITE:PS51450 GO:GO:0016021 GO:GO:0030154 GO:GO:0004930
InterPro:IPR003591 SMART:SM00369 GO:GO:0030198 GO:GO:0042562
GO:GO:0007188 GO:GO:0007567 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0060427 OMA:YTLTTRP GO:GO:0060658
GeneTree:ENSGT00650000093266 EMBL:AAEX03010082 EMBL:AAEX03010083
ProteinModelPortal:F1PE17 Ensembl:ENSCAFT00000013759 Uniprot:F1PE17
Length = 696
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 41/133 (30%), Positives = 66/133 (49%)
Query: 39 MSLMQNAIQNLTEIP--TCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENL 96
+ L N I NL + +C L L + N + ++ N F + L L L N+ +ENL
Sbjct: 190 LDLEDNHIHNLRNLTFISCGNLTVLVMRKNKINHLNENTFAPLQKLAELDLGSNK-IENL 248
Query: 97 PLGIF-NLVSLQHLDISWTGITTLPIE-LKYLVNLKCLNLEYTFRLSRIPQQVISDLKML 154
P +F +L L L++S+ I + + YLV LK L+LE +S I Q++ L L
Sbjct: 249 PPQVFKDLKELSQLNLSYNPIQKIQADQFDYLVKLKSLSLE-GIEISNIQQRMFRPLMNL 307
Query: 155 RAL--RMFE-CGF 164
+ + F+ CG+
Sbjct: 308 SHIYFKKFQYCGY 320
Score = 118 (46.6 bits), Expect = 0.00071, P = 0.00071
Identities = 40/126 (31%), Positives = 61/126 (48%)
Query: 39 MSLMQNAIQNLTEIPTC---PRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLEN 95
++LM N + +L + P C PRL L L NH+ + N F S +L VL++ N+ + +
Sbjct: 165 LALMNNVLTHLPDKPLCQYMPRLHWLDLEDNHIHNLRNLTFISCGNLTVLVMRKNK-INH 223
Query: 96 LPLGIFN-LVSLQHLDISWTGITTLPIEL-KYLVNLKCLNLEYTFRLSRIPQQVISDLKM 153
L F L L LD+ I LP ++ K L L LNL Y + +I L
Sbjct: 224 LNENTFAPLQKLAELDLGSNKIENLPPQVFKDLKELSQLNLSYN-PIQKIQADQFDYLVK 282
Query: 154 LRALRM 159
L++L +
Sbjct: 283 LKSLSL 288
>ZFIN|ZDB-GENE-080327-28 [details] [associations]
symbol:fmodb "fibromodulin b" species:7955 "Danio
rerio" [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027215
PROSITE:PS51450 ZFIN:ZDB-GENE-080327-28 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00600000084286 PANTHER:PTHR24371:SF11 EMBL:CR450833
IPI:IPI00504429 ProteinModelPortal:F1Q726
Ensembl:ENSDART00000019822 Bgee:F1Q726 Uniprot:F1Q726
Length = 418
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 41/120 (34%), Positives = 61/120 (50%)
Query: 42 MQNAIQNLTEIPT-CPR-LRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLPLG 99
+QN NL+ +P P LR L L N++ V N FH M++L L L N ++E+L
Sbjct: 204 LQN--NNLSRVPQDLPHSLRDLHLNHNNISVVPLNSFHGMSNLTALYLQAN-AIEDLGNA 260
Query: 100 IFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRALRM 159
+ L+SL LD+ + +P L L L LEY + +S IP +S LR +R+
Sbjct: 261 LKGLLSLTVLDLRGNRLKMIPQSLP--PKLSQLYLEYNY-ISSIPADFLSQRPDLRFVRL 317
>UNIPROTKB|O75093 [details] [associations]
symbol:SLIT1 "Slit homolog 1 protein" species:9606 "Homo
sapiens" [GO:0021510 "spinal cord development" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0043395 "heparan sulfate proteoglycan binding" evidence=IEA]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0005509 "calcium ion binding" evidence=NAS]
[GO:0005615 "extracellular space" evidence=NAS] [GO:0048853
"forebrain morphogenesis" evidence=NAS] [GO:0048846 "axon extension
involved in axon guidance" evidence=IDA] [GO:0050919 "negative
chemotaxis" evidence=IDA] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0048495 "Roundabout binding"
evidence=IPI] [GO:0021834 "chemorepulsion involved in embryonic
olfactory bulb interneuron precursor migration" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IDA;TAS] [GO:0005737
"cytoplasm" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
Reactome:REACT_111045 GO:GO:0005615 EMBL:CH471066 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 InterPro:IPR025875 Pfam:PF12799 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
GO:GO:0048853 Pfam:PF01463 EMBL:AL442123 GO:GO:0022028
GO:GO:0050919 GO:GO:0048843 EMBL:AB017167 EMBL:AB011537
EMBL:AL512424 EMBL:BC146851 EMBL:AY029183 IPI:IPI00296434
IPI:IPI00871419 RefSeq:NP_003052.2 UniGene:Hs.632082
ProteinModelPortal:O75093 SMR:O75093 IntAct:O75093
MINT:MINT-2797238 STRING:O75093 PhosphoSite:O75093 PaxDb:O75093
PRIDE:O75093 Ensembl:ENST00000266058 GeneID:6585 KEGG:hsa:6585
UCSC:uc001kmw.2 CTD:6585 GeneCards:GC10M098747 H-InvDB:HIX0079168
H-InvDB:HIX0170440 HGNC:HGNC:11085 HPA:HPA006879 MIM:603742
neXtProt:NX_O75093 PharmGKB:PA35938 HOGENOM:HOG000116120
HOVERGEN:HBG057959 InParanoid:O75093 KO:K06838 OrthoDB:EOG4VDPXM
PhylomeDB:O75093 ChiTaRS:SLIT1 GenomeRNAi:6585 NextBio:25625
ArrayExpress:O75093 Bgee:O75093 CleanEx:HS_SLIT1
Genevestigator:O75093 GermOnline:ENSG00000187122 Uniprot:O75093
Length = 1534
Score = 122 (48.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 43/159 (27%), Positives = 79/159 (49%)
Query: 21 GVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCP--RLRTLFLPSNHLGTVSNNFFHS 78
G GLT P+ + + T + L N I+++ P +LR + L +N + ++ + F
Sbjct: 297 GKGLTAIPA-NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQG 355
Query: 79 MASLRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTL-PIELKYLVNLKCLNLEY 136
+ SL L+L Y + +LP G+F L +LQ L ++ I + P + L NL L+L Y
Sbjct: 356 LRSLNSLVL-YGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSL-Y 413
Query: 137 TFRLSRIPQQVISDLKMLRALRM----FECGFNVELEAD 171
++ + + + L+ ++ L + F C N++ AD
Sbjct: 414 DNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLAD 452
Score = 102 (41.0 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 42/143 (29%), Positives = 64/143 (44%)
Query: 21 GVGLTEAPSIGMWKETTRMSLMQNAIQNL--TEIPTCPRLRTLFLPSNHLGTVSNNFFHS 78
G GL P + + T R+ L N I + + +LR L L N +G V F
Sbjct: 49 GTGLQAIPK-NIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDD 107
Query: 79 MASLRVLILSYNRSLENLPLGIF-NLVSLQHLDISWTGITTLPIE-LKYLVNLKCLNLEY 136
M L L L+ N+ L LP +F N +L LD+S I +P + + +LK L L+
Sbjct: 108 MKELERLRLNRNQ-LHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDK 166
Query: 137 TFRLSRIPQQVISDLKMLRALRM 159
++S I + L+ L L +
Sbjct: 167 N-QISCIEEGAFRALRGLEVLTL 188
Score = 67 (28.6 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 21/66 (31%), Positives = 29/66 (43%)
Query: 214 GSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDLEELKIDAGELKRIREICGFH 273
G + T L L + N N + AF L++L L LY N ++ L G +R I H
Sbjct: 378 GGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLA--KGTFTSLRAIQTLH 435
Query: 274 SLQKVF 279
Q F
Sbjct: 436 LAQNPF 441
Score = 54 (24.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 209 SYCRLGSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDLEELK 257
S+ + ++T L L + N + AF LR LR L L+ ND+ L+
Sbjct: 803 SFTNMSQLTT--LILSY-NALQCIPPLAFQGLRSLRLLSLHGNDISTLQ 848
Score = 50 (22.7 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 214 GSIST-QCLCLRHLNNS--NSLSVFAFASLRHLRTLQLYFNDLE 254
G +ST + L L L+N+ +SLS +F ++ L TL L +N L+
Sbjct: 778 GQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQ 821
Score = 45 (20.9 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 221 LCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDL 253
L LR+ N + + +F LR++R L LY N +
Sbjct: 618 LMLRN-NRISCIHNDSFTGLRNVRLLSLYDNQI 649
>UNIPROTKB|F1PSS7 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 GeneTree:ENSGT00700000104083
OMA:KCVHGKC EMBL:AAEX03015440 Ensembl:ENSCAFT00000014303
Uniprot:F1PSS7
Length = 1534
Score = 121 (47.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 43/159 (27%), Positives = 79/159 (49%)
Query: 21 GVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCP--RLRTLFLPSNHLGTVSNNFFHS 78
G GLT P+ + + T + L N I+++ P +LR + L +N + ++ + F
Sbjct: 297 GKGLTAIPA-NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQG 355
Query: 79 MASLRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTL-PIELKYLVNLKCLNLEY 136
+ SL L+L Y + +LP G+F L +LQ L ++ I + P + L NL L+L Y
Sbjct: 356 LRSLNSLVL-YGNKITDLPRGVFGGLYTLQLLLLNANKINCVRPDAFQDLQNLSLLSL-Y 413
Query: 137 TFRLSRIPQQVISDLKMLRALRM----FECGFNVELEAD 171
++ + + + L+ ++ L + F C N++ AD
Sbjct: 414 DNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLAD 452
Score = 55 (24.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 209 SYCRLGSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDLEELK 257
S+ + ++T L L + N + AF LR LR L L+ ND+ L+
Sbjct: 803 SFTNMSQLTT--LILSY-NALQCIPPLAFQGLRSLRLLSLHGNDISTLR 848
Score = 50 (22.7 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 214 GSIST-QCLCLRHLNNS--NSLSVFAFASLRHLRTLQLYFNDLE 254
G +ST + L L L+N+ +SLS +F ++ L TL L +N L+
Sbjct: 778 GQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQ 821
>UNIPROTKB|F1LS74 [details] [associations]
symbol:Slit1 "Slit homolog 1 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69307 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
IPI:IPI00389760 Ensembl:ENSRNOT00000034758 ArrayExpress:F1LS74
Uniprot:F1LS74
Length = 1417
Score = 122 (48.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 43/159 (27%), Positives = 79/159 (49%)
Query: 21 GVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCP--RLRTLFLPSNHLGTVSNNFFHS 78
G GLT P+ + + T + L N I+++ P +LR + L +N + ++ + F
Sbjct: 183 GKGLTAIPA-NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQG 241
Query: 79 MASLRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTL-PIELKYLVNLKCLNLEY 136
+ SL L+L Y + +LP G+F L +LQ L ++ I + P + L NL L+L Y
Sbjct: 242 LRSLNSLVL-YGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSL-Y 299
Query: 137 TFRLSRIPQQVISDLKMLRALRM----FECGFNVELEAD 171
++ + + + L+ ++ L + F C N++ AD
Sbjct: 300 DNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLAD 338
Score = 53 (23.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 209 SYCRLGSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDLEELK 257
S+ + ++T L L + N + AF LR LR L L+ ND+ L+
Sbjct: 689 SFTNMSQLTT--LILSY-NALQCIPPLAFQGLRSLRLLSLHGNDVSTLQ 734
Score = 50 (22.7 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 214 GSIST-QCLCLRHLNNS--NSLSVFAFASLRHLRTLQLYFNDLE 254
G +ST + L L L+N+ +SLS +F ++ L TL L +N L+
Sbjct: 664 GQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQ 707
>UNIPROTKB|E2RGS8 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00373 PROSITE:PS51450
GO:GO:0016021 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 CTD:59352 KO:K08399 OMA:AYGKAPS
EMBL:AAEX03004986 EMBL:AAEX03004981 EMBL:AAEX03004982
EMBL:AAEX03004983 EMBL:AAEX03004984 EMBL:AAEX03004985
RefSeq:XP_848875.1 Ensembl:ENSCAFT00000016729 GeneID:490231
KEGG:cfa:490231 NextBio:20863298 Uniprot:E2RGS8
Length = 965
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 43/153 (28%), Positives = 72/153 (47%)
Query: 17 LVLAGVGLTEAPSIGMWKETTRMSLMQ---NAIQNLTEIPTCPRLRTLFLPSNHLGTVSN 73
L L G+ P GM ++ R+ +++ N I+ L + C +L + L N +G +
Sbjct: 331 LTLTRAGIRLLPP-GMCQQLPRLRVLELSHNQIEELPSLHRCQKLEEIGLQHNRIGAIGA 389
Query: 74 NFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIE-LKYLVNLKC- 131
+ F ++SLR L LS+N P L SL LD++ ++TLP+ L L++LK
Sbjct: 390 DTFSQLSSLRALDLSWNAIRSIHPEAFVTLRSLVKLDLTDNQLSTLPLAGLGGLMHLKLR 449
Query: 132 --LNLEYTFRLSRIPQQVISDLKMLRALRMFEC 162
L L F P+ L++L ++C
Sbjct: 450 GNLALSQAFSKDSFPK-----LRILEVPYAYQC 477
>MGI|MGI:1315203 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007411 "axon guidance" evidence=ISO;IGI;IDA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0021772 "olfactory
bulb development" evidence=IGI] [GO:0022028 "tangential migration
from the subventricular zone to the olfactory bulb" evidence=IMP]
[GO:0022029 "telencephalon cell migration" evidence=IGI]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IGI;IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI] [GO:0040023
"establishment of nucleus localization" evidence=IDA] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISO] [GO:0048495
"Roundabout binding" evidence=ISO;IPI] [GO:0048812 "neuron
projection morphogenesis" evidence=IGI] [GO:0048843 "negative
regulation of axon extension involved in axon guidance"
evidence=ISO] [GO:0048846 "axon extension involved in axon
guidance" evidence=ISO] [GO:0050919 "negative chemotaxis"
evidence=ISO;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 MGI:MGI:1315203
GO:GO:0005737 GO:GO:0005615 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005102
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 GO:GO:0051964 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
GO:GO:0048843 CTD:6585 HOGENOM:HOG000116120 HOVERGEN:HBG057959
KO:K06838 OrthoDB:EOG4VDPXM EMBL:AF144627 EMBL:AK122376
EMBL:BC057131 EMBL:BC062091 IPI:IPI00330211 RefSeq:NP_056563.2
UniGene:Mm.40322 ProteinModelPortal:Q80TR4 SMR:Q80TR4 STRING:Q80TR4
PhosphoSite:Q80TR4 PRIDE:Q80TR4 Ensembl:ENSMUST00000025993
GeneID:20562 KEGG:mmu:20562 UCSC:uc008hmf.2 InParanoid:Q80TR4
OMA:KCVHGKC NextBio:298853 Bgee:Q80TR4 CleanEx:MM_SLIT1
Genevestigator:Q80TR4 GermOnline:ENSMUSG00000025020 Uniprot:Q80TR4
Length = 1531
Score = 122 (48.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 43/159 (27%), Positives = 79/159 (49%)
Query: 21 GVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCP--RLRTLFLPSNHLGTVSNNFFHS 78
G GLT P+ + + T + L N I+++ P +LR + L +N + ++ + F
Sbjct: 297 GKGLTAIPA-NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQG 355
Query: 79 MASLRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTL-PIELKYLVNLKCLNLEY 136
+ SL L+L Y + +LP G+F L +LQ L ++ I + P + L NL L+L Y
Sbjct: 356 LRSLNSLVL-YGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSL-Y 413
Query: 137 TFRLSRIPQQVISDLKMLRALRM----FECGFNVELEAD 171
++ + + + L+ ++ L + F C N++ AD
Sbjct: 414 DNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLAD 452
Score = 53 (23.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 209 SYCRLGSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDLEELK 257
S+ + ++T L L + N + AF LR LR L L+ ND+ L+
Sbjct: 803 SFTNMSQLTT--LILSY-NALQCIPPLAFQGLRSLRLLSLHGNDVSTLQ 848
Score = 50 (22.7 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 214 GSIST-QCLCLRHLNNS--NSLSVFAFASLRHLRTLQLYFNDLE 254
G +ST + L L L+N+ +SLS +F ++ L TL L +N L+
Sbjct: 778 GQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQ 821
>RGD|69307 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005615
"extracellular space" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0007409 "axonogenesis" evidence=ISO]
[GO:0007411 "axon guidance" evidence=ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0008045 "motor neuron axon guidance"
evidence=IEA;ISO] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0021772 "olfactory bulb development" evidence=ISO]
[GO:0022028 "tangential migration from the subventricular zone to
the olfactory bulb" evidence=IEA;ISO] [GO:0022029 "telencephalon
cell migration" evidence=ISO] [GO:0031290 "retinal ganglion cell
axon guidance" evidence=IEA;ISO] [GO:0033563 "dorsal/ventral axon
guidance" evidence=IEA;ISO] [GO:0040023 "establishment of nucleus
localization" evidence=IEA;ISO] [GO:0043395 "heparan sulfate
proteoglycan binding" evidence=IDA] [GO:0048495 "Roundabout binding"
evidence=IEA;ISO] [GO:0048812 "neuron projection morphogenesis"
evidence=ISO] [GO:0048843 "negative regulation of axon extension
involved in axon guidance" evidence=IDA] [GO:0048846 "axon extension
involved in axon guidance" evidence=IEA;ISO] [GO:0050919 "negative
chemotaxis" evidence=IEA;ISO] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 122 (48.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 43/159 (27%), Positives = 79/159 (49%)
Query: 21 GVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCP--RLRTLFLPSNHLGTVSNNFFHS 78
G GLT P+ + + T + L N I+++ P +LR + L +N + ++ + F
Sbjct: 297 GKGLTAIPA-NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQG 355
Query: 79 MASLRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTL-PIELKYLVNLKCLNLEY 136
+ SL L+L Y + +LP G+F L +LQ L ++ I + P + L NL L+L Y
Sbjct: 356 LRSLNSLVL-YGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSL-Y 413
Query: 137 TFRLSRIPQQVISDLKMLRALRM----FECGFNVELEAD 171
++ + + + L+ ++ L + F C N++ AD
Sbjct: 414 DNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLAD 452
Score = 53 (23.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 209 SYCRLGSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDLEELK 257
S+ + ++T L L + N + AF LR LR L L+ ND+ L+
Sbjct: 803 SFTNMSQLTT--LILSY-NALQCIPPLAFQGLRSLRLLSLHGNDVSTLQ 848
Score = 50 (22.7 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 214 GSIST-QCLCLRHLNNS--NSLSVFAFASLRHLRTLQLYFNDLE 254
G +ST + L L L+N+ +SLS +F ++ L TL L +N L+
Sbjct: 778 GQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQ 821
>UNIPROTKB|O88279 [details] [associations]
symbol:Slit1 "Slit homolog 1 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 122 (48.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 43/159 (27%), Positives = 79/159 (49%)
Query: 21 GVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCP--RLRTLFLPSNHLGTVSNNFFHS 78
G GLT P+ + + T + L N I+++ P +LR + L +N + ++ + F
Sbjct: 297 GKGLTAIPA-NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQG 355
Query: 79 MASLRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTL-PIELKYLVNLKCLNLEY 136
+ SL L+L Y + +LP G+F L +LQ L ++ I + P + L NL L+L Y
Sbjct: 356 LRSLNSLVL-YGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSL-Y 413
Query: 137 TFRLSRIPQQVISDLKMLRALRM----FECGFNVELEAD 171
++ + + + L+ ++ L + F C N++ AD
Sbjct: 414 DNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLAD 452
Score = 53 (23.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 209 SYCRLGSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDLEELK 257
S+ + ++T L L + N + AF LR LR L L+ ND+ L+
Sbjct: 803 SFTNMSQLTT--LILSY-NALQCIPPLAFQGLRSLRLLSLHGNDVSTLQ 848
Score = 50 (22.7 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 214 GSIST-QCLCLRHLNNS--NSLSVFAFASLRHLRTLQLYFNDLE 254
G +ST + L L L+N+ +SLS +F ++ L TL L +N L+
Sbjct: 778 GQLSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQ 821
>ZFIN|ZDB-GENE-061103-397 [details] [associations]
symbol:zgc:153913 "zgc:153913" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-061103-397 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 KO:K13023
GeneTree:ENSGT00700000104286 EMBL:CABZ01111922 EMBL:BC125910
IPI:IPI00613175 RefSeq:NP_001073448.1 UniGene:Dr.152360
Ensembl:ENSDART00000092924 GeneID:559700 KEGG:dre:559700
HOGENOM:HOG000205740 InParanoid:A0JMK3 OMA:CKVDKCS
OrthoDB:EOG4P8FJC NextBio:20883092 Uniprot:A0JMK3
Length = 496
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 45/140 (32%), Positives = 74/140 (52%)
Query: 39 MSLMQNAIQNLTEIPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLPL 98
++L N I+ LT L+TL L N L ++N FH++ + L LS N SL +P
Sbjct: 223 LNLRSNLIRVLTPGSFPASLKTLILKKNLLEKLTNAVFHTLHYITYLDLSQN-SLTEVPA 281
Query: 99 GIF-NLVSLQHLDISWTGITTLPIEL-KYLVNLKCLNLEYTFRLSRIPQQVISD---LKM 153
+F NL+SL+ LD+S I+TL + K L ++K + L+ +S + ++ D L++
Sbjct: 282 DLFQNLISLETLDLSENRISTLAGSVFKGLFSIKSVYLQKNSLIS-VDAHLLKDQHDLQL 340
Query: 154 L----RALRMFECGFNVELE 169
L +LR GF +L+
Sbjct: 341 LDLSNNSLRSIPSGFFEDLD 360
>ZFIN|ZDB-GENE-080327-15 [details] [associations]
symbol:lrrtm4l1 "leucine rich repeat transmembrane
neuronal 4 like 1" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-15 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0042802 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104056 EMBL:BX005125
EMBL:BX293550 IPI:IPI00876741 Ensembl:ENSDART00000113737
Bgee:F1QVN0 Uniprot:F1QVN0
Length = 571
Score = 119 (46.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 29/80 (36%), Positives = 44/80 (55%)
Query: 57 RLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGI 116
RL+ L L SN + + N FH + +LR L LSYN+ E P + L LQ+L + G+
Sbjct: 107 RLKELILSSNRISQLHNVTFHGVPNLRSLDLSYNKLQELQPGQFYGLRKLQNLHLRSNGL 166
Query: 117 TTLPIELKYLVNLKCLNLEY 136
T +P+ L+C +LE+
Sbjct: 167 TAIPVR----AFLECRSLEF 182
Score = 119 (46.9 bits), Expect = 0.00042, P = 0.00042
Identities = 47/158 (29%), Positives = 76/158 (48%)
Query: 17 LVLAGVGLTEAPSIGMWKETTRMSLMQ---NAIQNLTEIPTC--PRLRTLFLPSNHLGTV 71
L L GLT P + + E + + N ++ LT RL L L N +
Sbjct: 159 LHLRSNGLTAIP-VRAFLECRSLEFLDLGYNRLRVLTRTAFLGLSRLMELHLEHNQFSRI 217
Query: 72 SNNFFHSMASLRVLILSYNRSLENLPLGI-FNLVSLQHLDISWTGITTL-PIELKYLVNL 129
+ F +A+LR L L +NR + + G+ ++ +LQ LDIS I L P+ + L NL
Sbjct: 218 NFFLFPRLANLRALYLQWNR-IRAVNQGLPWSWYTLQRLDISGNEIQVLDPVVFQCLPNL 276
Query: 130 KCLNLEYTFRLSRIPQQVISDLKMLRAL----RMFECG 163
+ LNLE +L+ + Q+V++ L + M++CG
Sbjct: 277 QVLNLESN-KLANVSQEVVAAWISLTTISLAGNMWDCG 313
Score = 46 (21.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 201 FGALQRLLSYCRLGSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFN 251
+ L+ L LG L L H N + ++ F F L +LR L L +N
Sbjct: 187 YNRLRVLTRTAFLGLSRLMELHLEH-NQFSRINFFLFPRLANLRALYLQWN 236
>ZFIN|ZDB-GENE-080327-16 [details] [associations]
symbol:lingo1a "leucine rich repeat and Ig domain
containing 1a" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0031103 "axon regeneration"
evidence=IMP] InterPro:IPR007110 PROSITE:PS50835
ZFIN:ZDB-GENE-080327-16 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0031103
InterPro:IPR026906 Pfam:PF13306 GeneTree:ENSGT00690000101682
EMBL:BX005076 EMBL:CR759783 IPI:IPI01024439
Ensembl:ENSDART00000149965 Bgee:F8W4D7 Uniprot:F8W4D7
Length = 619
Score = 123 (48.4 bits), Expect = 0.00017, P = 0.00017
Identities = 79/320 (24%), Positives = 129/320 (40%)
Query: 24 LTEAPSIGMWKETTRMSLMQNAIQNLT--EIPTCPRLRTLFLPSNHLGTVSNNFFHSMAS 81
L P G+ ET + L +N I+ + E P+L L L N + + F+++
Sbjct: 59 LMSVPE-GIPSETRLLDLSKNRIKTINPDEFSAFPQLEELELNENTISAIEPGAFNNLYG 117
Query: 82 LRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIELKY--LVNLKCLNLEYTF 138
L+ L L N+ L+ + LG+F L +L LDIS I L ++ + L NL+ L +
Sbjct: 118 LQTLGLRSNK-LKLIQLGVFTGLSNLTKLDISENKIVIL-LDYMFQDLYNLRSLEVGDN- 174
Query: 139 RLSRIPQQVISDLKMLRALRMFECGF-NVELEADSILFGDSXXXXXXXXXXXXXXXXTIT 197
L I + L L L + +C +V EA + L
Sbjct: 175 DLVFISHRAFHGLSSLEQLTLEKCNLTSVPTEAFTHLHSLVTLRLRNLNINSIRDYSFKR 234
Query: 198 LQSFGALQRLLSYCRLGSISTQCLC---LRHLNNSNS-LSVFAFASLRHLRTLQLYFNDL 253
L L+ + ++ L +++T CL L L +N+ L+ + +LRHL + L F ++
Sbjct: 235 LYRLKVLE-IANWPYLDTMTTNCLYGLNLTSLTITNANLTSIPYLALRHL--VYLRFLNM 291
Query: 254 EELKIDAGELKRIREICGFHSLQKVFYKILKIEARDMACT--CSQYQACPRGLTKFEE-- 309
I E R+ ++ L V ++ IE LT EE
Sbjct: 292 SYNPIQMIEGNRLHDLLRLQELYLVGGRLSVIEPYSFRGLNYLKVLNVSSNFLTTLEESV 351
Query: 310 -HPLKRLECAELKELPLDCN 328
H + LE L + PL C+
Sbjct: 352 FHSVGNLETLALHDNPLACD 371
>RGD|1566005 [details] [associations]
symbol:Flrt3 "fibronectin leucine rich transmembrane protein 3"
species:10116 "Rattus norvegicus" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 PROSITE:PS50853
PROSITE:PS51450 SMART:SM00060 RGD:1566005 GO:GO:0016021
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007155 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 EMBL:CH473949 HOGENOM:HOG000290188 HOVERGEN:HBG051629
KO:K16362 CTD:23767 OMA:SPYRVCM OrthoDB:EOG4NCMCB EMBL:BC160843
IPI:IPI00368800 RefSeq:NP_001119763.1 UniGene:Rn.220263
ProteinModelPortal:B1H234 STRING:B1H234 PRIDE:B1H234
Ensembl:ENSRNOT00000006454 GeneID:366205 KEGG:rno:366205
UCSC:RGD:1566005 GeneTree:ENSGT00700000104442 NextBio:688953
Genevestigator:B1H234 Uniprot:B1H234
Length = 649
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 41/134 (30%), Positives = 68/134 (50%)
Query: 31 GMWKETTRMSLMQNAIQNLTEIPT-CPR-LRTLFLPSNHLGTVSNNFFHSMASLRVLILS 88
G ++++ + L+ + +L+ IP PR + L L N + T+S+ H + SL+ L+L
Sbjct: 148 GAFRDSNYLRLLFLSRNHLSTIPGGLPRTIEELRLDDNRISTISSPSLHGLTSLKRLVLD 207
Query: 89 YNRSLENLPLG---IFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYTFRLSRIPQ 145
N L N LG FNLV+L L + +T P+ L +L+ L L+ ++R+P
Sbjct: 208 GNL-LNNHGLGDKVFFNLVNLTELSLVRNSLTAAPVNLPG-TSLRKLYLQDN-HINRVPP 264
Query: 146 QVISDLKMLRALRM 159
S L+ L L M
Sbjct: 265 NAFSYLRQLYRLDM 278
>UNIPROTKB|Q59HI9 [details] [associations]
symbol:TLR1 "Toll-like receptor" species:9823 "Sus scrofa"
[GO:0071727 "cellular response to triacyl bacterial lipopeptide"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0045410 "positive regulation of interleukin-6
biosynthetic process" evidence=IEA] [GO:0042535 "positive
regulation of tumor necrosis factor biosynthetic process"
evidence=IEA] [GO:0042495 "detection of triacyl bacterial
lipopeptide" evidence=IEA] [GO:0035354 "Toll-like receptor
1-Toll-like receptor 2 protein complex" evidence=IEA] [GO:0045087
"innate immune response" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0006954 "inflammatory response"
evidence=IEA] [GO:0050707 "regulation of cytokine secretion"
evidence=IEA] [GO:0042496 "detection of diacyl bacterial
lipopeptide" evidence=IEA] [GO:0042088 "T-helper 1 type immune
response" evidence=IEA] [GO:0034150 "toll-like receptor 6 signaling
pathway" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0002755 "MyD88-dependent
toll-like receptor signaling pathway" evidence=IEA]
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR017241
InterPro:IPR027187 Pfam:PF01582 PIRSF:PIRSF037595 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0016021 GO:GO:0006954
InterPro:IPR000483 SMART:SM00082 GO:GO:0045087 GO:GO:0005622
GO:GO:0004888 GO:GO:0042535 GO:GO:0045410 SUPFAM:SSF52200
GeneTree:ENSGT00700000104367 HOVERGEN:HBG023180 OMA:NNIETTW
GO:GO:0035354 GO:GO:0071727 GO:GO:0042495 PANTHER:PTHR24365:SF130
EMBL:CU694791 EMBL:AB210286 EMBL:AB208695 UniGene:Ssc.87628
SMR:Q59HI9 STRING:Q59HI9 Ensembl:ENSSSCT00000030913
Ensembl:ENSSSCT00000032865 Uniprot:Q59HI9
Length = 796
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 41/141 (29%), Positives = 69/141 (48%)
Query: 1 MTLRIASTINKEKENFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNL--TEIPTCPRL 58
+ L I +++E E + + GLT P + ETT + L QN+I L ++I + +L
Sbjct: 17 LILEIRIQLSEESEVLVDRSKTGLTHVPK-DLSLETTILDLSQNSISELQTSDILSLSKL 75
Query: 59 RTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITT 118
R + N + + + F L L LS+N+ LE + +++L+HLD+S+
Sbjct: 76 RVFIISHNRIQYLDVSVFKFNQELEYLDLSHNK-LEKI--SCHPMLNLKHLDLSFNAFDA 132
Query: 119 LPI--ELKYLVNLKCLNLEYT 137
LPI E + L+ L L T
Sbjct: 133 LPICQEFGSMFQLEFLGLSAT 153
>UNIPROTKB|Q6P9F7 [details] [associations]
symbol:LRRC8B "Leucine-rich repeat-containing protein 8B"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
EMBL:CH471097 HOGENOM:HOG000231806 HOVERGEN:HBG052360
InterPro:IPR021040 Pfam:PF12534 EMBL:AF385436 EMBL:D86984
EMBL:AY358112 EMBL:BC030607 EMBL:BC060782 IPI:IPI00166036
RefSeq:NP_001127948.1 RefSeq:NP_056165.1 UniGene:Hs.482017
UniGene:Hs.741594 ProteinModelPortal:Q6P9F7 SMR:Q6P9F7
PhosphoSite:Q6P9F7 DMDM:88911355 PaxDb:Q6P9F7 PRIDE:Q6P9F7
Ensembl:ENST00000330947 Ensembl:ENST00000358200
Ensembl:ENST00000439853 GeneID:23507 KEGG:hsa:23507 UCSC:uc001dnh.3
CTD:23507 GeneCards:GC01P089990 HGNC:HGNC:30692 HPA:HPA017950
MIM:612888 neXtProt:NX_Q6P9F7 PharmGKB:PA142671535
InParanoid:Q6P9F7 OMA:IDAVCYE OrthoDB:EOG44BB1M PhylomeDB:Q6P9F7
GenomeRNAi:23507 NextBio:45903 ArrayExpress:Q6P9F7 Bgee:Q6P9F7
CleanEx:HS_LRRC8B Genevestigator:Q6P9F7 GermOnline:ENSG00000197147
Uniprot:Q6P9F7
Length = 803
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 68/270 (25%), Positives = 108/270 (40%)
Query: 68 LGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLV 127
L + +N F + + VL L ++ LP + LV+L+ L + + + L +L
Sbjct: 429 LNGLPDNVFE-LTEMEVLSLELIPEVK-LPSAVSQLVNLKELRVYHSSLVVDHPALAFLE 486
Query: 128 -NLKCLNLEYTFRLSRIPQQVISDLKMLRALRMFECGFNVELEADSIL-FGDSXXXXXXX 185
NLK L L++T + +IP+ V LK L+ L + C +L + F D
Sbjct: 487 ENLKILRLKFT-EMGKIPRWVFH-LKNLKELYLSGCVLPEQLSTMQLEGFQDLKNLRTLY 544
Query: 186 XXXXXXXXXTITLQSFGALQRLLSYCRLGSISTQCLCLRHLNNSNSLSVFAFASLRHLRT 245
+ +LQ+L S GS L+ + N SL + + L +
Sbjct: 545 LKSSLSRIPQVVTDLLPSLQKL-SLDNEGSKLVVLNNLKKMVNLKSLELIS-CDLERIPH 602
Query: 246 LQLYFNDLEELKIDAGELKRIREICGFHSLQKVFYKILKIEARDMACTCSQYQACPR--- 302
N+L EL + LK + EI F LQ + LK+ ++A +Q A
Sbjct: 603 SIFSLNNLHELDLRENNLKTVEEIISFQHLQNL--SCLKLWHNNIAYIPAQIGALSNLEQ 660
Query: 303 -GL--TKFEEHPLKRLECAELKELPLDCNH 329
L E PL+ C +L L L NH
Sbjct: 661 LSLDHNNIENLPLQLFLCTKLHYLDLSYNH 690
>MGI|MGI:2138133 [details] [associations]
symbol:Lrrc59 "leucine rich repeat containing 59"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2138133
GO:GO:0016021 GO:GO:0005635 GO:GO:0005789 eggNOG:COG4886
GO:GO:0042645 EMBL:AL645764 CTD:55379 GeneTree:ENSGT00390000017385
HOGENOM:HOG000073534 HOVERGEN:HBG081933 OMA:SDFCSLT
OrthoDB:EOG4Z62PR EMBL:AK053450 EMBL:AK159374 EMBL:AK159552
EMBL:AK166576 EMBL:AK167604 EMBL:AK169390 EMBL:BC006877
EMBL:BC066172 IPI:IPI00123281 RefSeq:NP_598568.1 UniGene:Mm.172720
ProteinModelPortal:Q922Q8 SMR:Q922Q8 IntAct:Q922Q8 STRING:Q922Q8
PhosphoSite:Q922Q8 PaxDb:Q922Q8 PRIDE:Q922Q8
Ensembl:ENSMUST00000021239 GeneID:98238 KEGG:mmu:98238
UCSC:uc007kze.1 InParanoid:Q922Q8 NextBio:353376 Bgee:Q922Q8
CleanEx:MM_LRRC59 Genevestigator:Q922Q8
GermOnline:ENSMUSG00000020869 Uniprot:Q922Q8
Length = 307
Score = 118 (46.6 bits), Expect = 0.00019, P = 0.00019
Identities = 32/85 (37%), Positives = 46/85 (54%)
Query: 51 EIPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLD 110
E+ P+ L L N L T+ ++F + L L LS N+ L+ LP LV+LQHLD
Sbjct: 34 ELAALPKATVLDLSCNKLSTLPSDFC-GLTHLVKLDLSKNK-LQQLPADFGRLVNLQHLD 91
Query: 111 ISWTGITTLPIELKYLVNLKCLNLE 135
+ + TLP+ L NLK L+L+
Sbjct: 92 LLNNRLVTLPVSFAQLKNLKWLDLK 116
>RGD|1305092 [details] [associations]
symbol:Lrrc59 "leucine rich repeat containing 59" species:10116
"Rattus norvegicus" [GO:0005635 "nuclear envelope" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 RGD:1305092 GO:GO:0016021 GO:GO:0005635
GO:GO:0005789 eggNOG:COG4886 GO:GO:0042645 CTD:55379
GeneTree:ENSGT00390000017385 HOGENOM:HOG000073534
HOVERGEN:HBG081933 OMA:SDFCSLT OrthoDB:EOG4Z62PR EMBL:D13623
EMBL:BC086530 IPI:IPI00206020 RefSeq:NP_001008281.1 UniGene:Rn.2783
ProteinModelPortal:Q5RJR8 STRING:Q5RJR8 PRIDE:Q5RJR8
Ensembl:ENSRNOT00000004941 GeneID:287633 KEGG:rno:287633
UCSC:RGD:1305092 InParanoid:Q5RJR8 NextBio:626667
Genevestigator:Q5RJR8 GermOnline:ENSRNOG00000003524 Uniprot:Q5RJR8
Length = 307
Score = 118 (46.6 bits), Expect = 0.00019, P = 0.00019
Identities = 32/85 (37%), Positives = 46/85 (54%)
Query: 51 EIPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLD 110
E+ P+ L L N L T+ ++F + L L LS N+ L+ LP LV+LQHLD
Sbjct: 34 ELAALPKATVLDLSCNKLSTLPSDFC-GLTHLVKLDLSKNK-LQQLPADFGRLVNLQHLD 91
Query: 111 ISWTGITTLPIELKYLVNLKCLNLE 135
+ + TLP+ L NLK L+L+
Sbjct: 92 LLNNRLVTLPVSFAQLKNLKWLDLK 116
>MGI|MGI:3045299 [details] [associations]
symbol:Lrrd1 "leucine rich repeats and death domain
containing 1" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS50017 PROSITE:PS51450
MGI:MGI:3045299 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR025875 Pfam:PF12799 HSSP:P25147 UniGene:Mm.482273
GeneTree:ENSGT00700000104287 CTD:401387 HOVERGEN:HBG108705
OrthoDB:EOG4K6G5V EMBL:AK029981 EMBL:BC141026 EMBL:BC145170
IPI:IPI00223958 RefSeq:NP_766467.2 ProteinModelPortal:Q8C0R9
SMR:Q8C0R9 PhosphoSite:Q8C0R9 PRIDE:Q8C0R9
Ensembl:ENSMUST00000044039 GeneID:242838 KEGG:mmu:242838
HOGENOM:HOG000060227 InParanoid:B2RU96 OMA:HTIACYL NextBio:385582
Bgee:Q8C0R9 CleanEx:MM_4932412H11RIK Genevestigator:Q8C0R9
Uniprot:Q8C0R9
Length = 853
Score = 123 (48.4 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 40/126 (31%), Positives = 65/126 (51%)
Query: 37 TRMSLMQNAIQNLTEIPTC----PRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRS 92
T + + A + IP+C L L L N + S+ +LRVL +S N+
Sbjct: 527 TNLEYLDLAKNQIMTIPSCISAMVSLHVLILSDNKFESFPKELC-SLKNLRVLDISENK- 584
Query: 93 LENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYTF--RLSRIPQQV--I 148
L+ +PL I L +Q L++S T P+EL L L+ LN+ T +L+R+P++V +
Sbjct: 585 LQKIPLEISKLKRIQKLNLSNNIFTNFPVELCQLQTLEELNISQTSGKKLTRLPEEVSHM 644
Query: 149 SDLKML 154
+ LK+L
Sbjct: 645 TQLKIL 650
Score = 105 (42.0 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 29/99 (29%), Positives = 51/99 (51%)
Query: 39 MSLMQNAIQNLT-EIPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLP 97
+SL +N + ++ EI L+ L N + + + ++R L+L+ N ++ LP
Sbjct: 187 LSLQENGLSSIPLEIQLFHNLKILNASYNEISQIPKELLQ-LENMRQLLLNSNH-IDTLP 244
Query: 98 LGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEY 136
G+ +L L+ L + +T +P L L NL+ LNLEY
Sbjct: 245 SGLEHLRYLETLSLGKNMLTYIPDSLSSLKNLRILNLEY 283
Score = 60 (26.2 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 11/31 (35%), Positives = 23/31 (74%)
Query: 239 SLRHLRTLQLYFNDLEELKIDAGELKRIREI 269
SL++LR L + N L+++ ++ +LKRI+++
Sbjct: 571 SLKNLRVLDISENKLQKIPLEISKLKRIQKL 601
Score = 45 (20.9 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 227 NNSNSLSVFAFASLRHLRTLQLYFNDLEELKIDAGELKRIREI 269
NN S +F SL L++L L N++ L +L ++EI
Sbjct: 677 NNQISSLPSSFLSLEVLQSLDLRGNNMTALPSGIYKLSSLKEI 719
>MGI|MGI:1889507 [details] [associations]
symbol:Lrdd "leucine-rich and death domain containing"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0006915 "apoptotic process"
evidence=IDA] [GO:0006974 "response to DNA damage stimulus"
evidence=ISO] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=ISO]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=ISO]
Pfam:PF00560 InterPro:IPR000488 Pfam:PF00531 InterPro:IPR001611
InterPro:IPR019502 Pfam:PF10461 PROSITE:PS50017 PROSITE:PS51450
SMART:SM00005 MGI:MGI:1889507 GO:GO:0005634 GO:GO:0005737
GO:GO:0006915 GO:GO:0043066 GO:GO:0006977 eggNOG:COG4886
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
InterPro:IPR000906 Pfam:PF00791 PROSITE:PS51145
GeneTree:ENSGT00700000104417 MEROPS:S68.001 HOVERGEN:HBG066762
KO:K10130 OMA:FVRLQGN OrthoDB:EOG40K7ZC EMBL:AF274973 EMBL:BC145857
IPI:IPI00112786 RefSeq:NP_073145.1 UniGene:Mm.334321
ProteinModelPortal:Q9ERV7 SMR:Q9ERV7 STRING:Q9ERV7
PhosphoSite:Q9ERV7 PRIDE:Q9ERV7 Ensembl:ENSMUST00000026580
Ensembl:ENSMUST00000106005 GeneID:57913 KEGG:mmu:57913
UCSC:uc009klc.1 CTD:57913 HOGENOM:HOG000290659 InParanoid:A6H6F4
NextBio:314089 Bgee:Q9ERV7 CleanEx:MM_LRDD Genevestigator:Q9ERV7
GermOnline:ENSMUSG00000025507 Uniprot:Q9ERV7
Length = 915
Score = 130 (50.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 45/138 (32%), Positives = 72/138 (52%)
Query: 24 LTEAPSIGMWKETTRMSLMQNAIQNLTEIPTC-PRLR---TLFLPSNHLGTVSNNFFHSM 79
LT P+ G+ + ++ + + L +PTC P L L L NHL + ++
Sbjct: 119 LTTLPA-GL-SDLACLAHLDLSFNRLETLPTCVPELHGLDALLLSHNHLSELPEAL-GAL 175
Query: 80 ASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYTFR 139
+L L +++NR LE LPL + +L +LQ LD+S + T+P E+ L +L LNL R
Sbjct: 176 PALTFLTVTHNR-LERLPLTLGSLSTLQRLDLSENLLDTIPSEIGNLRSLSELNLASN-R 233
Query: 140 LSRIPQQVISDLKMLRAL 157
L +P ++ L+ LR L
Sbjct: 234 LQSLPAS-LAGLRSLRLL 250
Score = 38 (18.4 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 349 WDDLSTQNAFLPCFESLY 366
WDD++TQ A F LY
Sbjct: 569 WDDITTQVALE--FTHLY 584
>UNIPROTKB|F1LN28 [details] [associations]
symbol:Slit2 "Slit homolog 2 protein" species:10116 "Rattus
norvegicus" [GO:0004963 "follicle-stimulating hormone receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR002272 PRINTS:PR01143
PROSITE:PS51450 RGD:69310 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042699
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0004963
Pfam:PF01463 IPI:IPI00951919 Ensembl:ENSRNOT00000065056
ArrayExpress:F1LN28 Uniprot:F1LN28
Length = 680
Score = 127 (49.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 47/165 (28%), Positives = 82/165 (49%)
Query: 15 NFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCP--RLRTLFLPSNHLGTVS 72
N + G GLTE P+ + + T + L QN+I+ + P +LR L L +N + ++
Sbjct: 200 NIVDCRGKGLTEIPT-NLPETITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELA 258
Query: 73 NNFFHSMASLRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIE-LKYLVNLK 130
+ F + SL L+L Y + LP +F L SLQ L ++ I L ++ + L NL
Sbjct: 259 PDAFQGLRSLNSLVL-YGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLN 317
Query: 131 CLNLEYTFRLSRIPQQVISDLKMLRALRM----FECGFNVELEAD 171
L+L Y +L + + S L+ ++ + + F C +++ AD
Sbjct: 318 LLSL-YDNKLQTVAKGTFSALRAIQTMHLAQNPFICDCHLKWLAD 361
Score = 38 (18.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 214 GSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDL 253
G S + L LR N + + +F L +R L LY N +
Sbjct: 514 GLESLKTLMLRS-NRISCVGNDSFTGLGSVRLLSLYDNQI 552
>UNIPROTKB|F1NR92 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00813921 ProteinModelPortal:F1NR92
Ensembl:ENSGALT00000037317 ArrayExpress:F1NR92 Uniprot:F1NR92
Length = 1425
Score = 130 (50.8 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 45/147 (30%), Positives = 74/147 (50%)
Query: 15 NFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCP--RLRTLFLPSNHLGTVS 72
N + G GLTE P+ + + T + L QN+I+ + P +LR + L +N + +
Sbjct: 175 NIVDCRGKGLTEIPT-NLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAA 233
Query: 73 NNFFHSMASLRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIE-LKYLVNLK 130
+ F + SL L+L Y + LP G+F L SLQ L ++ I L ++ + L NL
Sbjct: 234 PDAFQGLRSLNSLVL-YGNKITELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLN 292
Query: 131 CLNLEYTFRLSRIPQQVISDLKMLRAL 157
L+L Y +L I + S L+ ++ L
Sbjct: 293 LLSL-YDNKLQTIAKGTFSPLRAIQTL 318
Score = 42 (19.8 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 218 TQCLCL-RHLNNSNSLSVFAFASLRHLRTLQLYFNDL 253
TQ L L N + F L+ LR L L+ ND+
Sbjct: 697 TQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDI 733
Score = 39 (18.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 214 GSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDL 253
G S + L LR N + + +F L +R L LY N +
Sbjct: 500 GLESLKTLMLRS-NRVSCVGNDSFTGLSSVRLLSLYDNQI 538
>MGI|MGI:1924557 [details] [associations]
symbol:Lrrc39 "leucine rich repeat containing 39"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1924557 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 EMBL:AK039277 EMBL:AK052159
EMBL:AK079125 IPI:IPI00221622 RefSeq:NP_780622.1 UniGene:Mm.216027
UniGene:Mm.259648 ProteinModelPortal:Q8BGI7 SMR:Q8BGI7
PhosphoSite:Q8BGI7 PRIDE:Q8BGI7 Ensembl:ENSMUST00000029573
GeneID:109245 KEGG:mmu:109245 CTD:127495
GeneTree:ENSGT00690000102098 HOGENOM:HOG000065739
HOVERGEN:HBG101376 InParanoid:Q8BGI7 OMA:HAYIQES OrthoDB:EOG47H5QR
NextBio:361821 Bgee:Q8BGI7 CleanEx:MM_LRRC39 Genevestigator:Q8BGI7
GermOnline:ENSMUSG00000027961 Uniprot:Q8BGI7
Length = 337
Score = 118 (46.6 bits), Expect = 0.00023, P = 0.00023
Identities = 41/137 (29%), Positives = 65/137 (47%)
Query: 23 GLTEAPS-IGMWKETTRMSLMQNAIQNLTE-IPTCPRLRTLFLPSNHLGTVSNNFFHSMA 80
GL + P IG ++ + L +N I + I RL+ L L N + TV +
Sbjct: 94 GLLKIPEFIGRFQHLIVLDLSRNTISEIPRGIGLLTRLQELILSYNKIKTVPKEL-SNCT 152
Query: 81 SLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYTFRL 140
SL L L+ NR + +LP + L+ L HLD+S TT+P + + L+ L++
Sbjct: 153 SLEKLELAVNRDISDLPPELSKLLKLTHLDLSMNQFTTIPHAVLDMPALEWLDMG----- 207
Query: 141 SRIPQQVISDLKMLRAL 157
S QQ+ L +R+L
Sbjct: 208 SNSLQQLPDSLDRMRSL 224
>MGI|MGI:2141353 [details] [associations]
symbol:Lrrc8b "leucine rich repeat containing 8 family,
member B" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:2141353 GO:GO:0016021 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 HOGENOM:HOG000231806
HOVERGEN:HBG052360 InterPro:IPR021040 Pfam:PF12534
OrthoDB:EOG44BB1M EMBL:AK220329 IPI:IPI00458354 UniGene:Mm.439781
UniGene:Mm.439828 ProteinModelPortal:Q5DU41 SMR:Q5DU41
PhosphoSite:Q5DU41 PaxDb:Q5DU41 PRIDE:Q5DU41 Bgee:Q5DU41
CleanEx:MM_LRRC8B Genevestigator:Q5DU41 Uniprot:Q5DU41
Length = 791
Score = 123 (48.4 bits), Expect = 0.00023, P = 0.00023
Identities = 66/270 (24%), Positives = 108/270 (40%)
Query: 68 LGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLV 127
L + +N F + + VL L ++ LP + LV+L+ L + + + L +L
Sbjct: 417 LNGLPDNVFE-LTEMEVLSLELIPEVK-LPAAVAQLVNLRELHVYHSSLVVDHPALAFLE 474
Query: 128 -NLKCLNLEYTFRLSRIPQQVISDLKMLRALRMFECGFNVELEADSIL-FGDSXXXXXXX 185
NL+ L L++T + +IP+ V LK L+ L + C +L + + F D
Sbjct: 475 ENLRILRLKFT-EMGKIPRWVFH-LKNLKELYLSGCVLPEQLSSLHLEGFQDLKNLRTLY 532
Query: 186 XXXXXXXXXTITLQSFGALQRLLSYCRLGSISTQCLCLRHLNNSNSLSVFAFASLRHLRT 245
+ +LQ+L S GS L+ + N SL + + L +
Sbjct: 533 LKSSLSRIPQVVTDLLPSLQKL-SLDNEGSKLVVLNNLKKMVNLKSLELLS-CDLERIPH 590
Query: 246 LQLYFNDLEELKIDAGELKRIREICGFHSLQKVFYKILKIEARDMACTCSQYQACPR--- 302
N+L EL + LK + EI F L + LK+ ++A +Q A
Sbjct: 591 SIFSLNNLHELDLKENNLKTVEEIISFQHLPSL--SCLKLWHNNIAYIPAQIGALSNLEQ 648
Query: 303 ---GLTKFEEHPLKRLECAELKELPLDCNH 329
G E PL+ C +L L L NH
Sbjct: 649 LFLGHNNIESLPLQLFLCTKLHYLDLSYNH 678
>ZFIN|ZDB-GENE-050417-279 [details] [associations]
symbol:lrrc39 "leucine rich repeat containing 39"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0045214 "sarcomere organization" evidence=IMP]
[GO:0060047 "heart contraction" evidence=IMP] [GO:0055008 "cardiac
muscle tissue morphogenesis" evidence=IMP] InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-050417-279 InterPro:IPR003591
SMART:SM00369 GO:GO:0060047 GO:GO:0055008 GO:GO:0045214
InterPro:IPR025875 Pfam:PF12799 CTD:127495 HOVERGEN:HBG101376
EMBL:BC093194 IPI:IPI00774171 RefSeq:NP_001017760.1
UniGene:Dr.91423 ProteinModelPortal:Q567F2 GeneID:550456
KEGG:dre:550456 InParanoid:Q567F2 NextBio:20879701 Uniprot:Q567F2
Length = 343
Score = 118 (46.6 bits), Expect = 0.00024, P = 0.00024
Identities = 45/150 (30%), Positives = 68/150 (45%)
Query: 22 VGLTEAPS-IGMWKETTRMSLMQNAIQNLT-EIPTCPRLRTLFLPSNHLGTVSNNFFHSM 79
+GL P I ++ + L +N++ + EI RLR L L N + V
Sbjct: 98 IGLQRIPRFISSFQSLIVLDLSRNSVTEIPKEIGKLTRLRELLLSYNRVSYVPEEL-GCC 156
Query: 80 ASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYTFR 139
+L L L+ N+ L+ LP + NL L HLD+S TT+P +VNL +LE+
Sbjct: 157 ENLEKLELAMNQDLDELPTQLSNLKKLSHLDLSMNQFTTIP---DCVVNLP--SLEWLDM 211
Query: 140 LSRIPQQVISDLKMLRALRMFECGFNVELE 169
S I + + D+ + L N ELE
Sbjct: 212 GSNILETLPDDIHRMEKLHTLWLPRN-ELE 240
>MGI|MGI:1891468 [details] [associations]
symbol:Lgr4 "leucine-rich repeat-containing G
protein-coupled receptor 4" species:10090 "Mus musculus"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0004930
"G-protein coupled receptor activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0030539 "male
genitalia development" evidence=IMP] [GO:0035239 "tube
morphogenesis" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0050673 "epithelial cell proliferation" evidence=IMP]
[GO:0061290 "canonical Wnt receptor signaling pathway involved in
metanephric kidney development" evidence=IMP] [GO:0072202 "cell
differentiation involved in metanephros development" evidence=IMP]
[GO:0072224 "metanephric glomerulus development" evidence=IMP]
[GO:0072282 "metanephric nephron tubule morphogenesis"
evidence=IMP] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 MGI:MGI:1891468
GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 EMBL:AL928922
GeneTree:ENSGT00650000092962 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OMA:DGYWSDC OrthoDB:EOG476JZH
ChiTaRS:LGR4 GO:GO:0072202 GO:GO:0072224 EMBL:AL845423
EMBL:AY255619 EMBL:AK044357 EMBL:BC056637 IPI:IPI00753252
RefSeq:NP_766259.2 UniGene:Mm.277351 UniGene:Mm.485992
ProteinModelPortal:A2ARI4 SMR:A2ARI4 STRING:A2ARI4
PhosphoSite:A2ARI4 PRIDE:A2ARI4 DNASU:107515
Ensembl:ENSMUST00000046548 GeneID:107515 KEGG:mmu:107515
UCSC:uc008lmq.1 HOGENOM:HOG000231829 InParanoid:A2ARI4
NextBio:358950 Bgee:A2ARI4 Genevestigator:A2ARI4 Uniprot:A2ARI4
Length = 951
Score = 129 (50.5 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 71/249 (28%), Positives = 107/249 (42%)
Query: 20 AGVGLTEAPSIGMWKETTRMSLMQNAIQNLTE--IPTCPRLRTLFLPSNHLGTVSNNFFH 77
+G GLT P G+ T + + N I L E P L L L N L +
Sbjct: 44 SGKGLTAVPE-GLSAFTQALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALS 102
Query: 78 SMASLRVLILSYNRSLENLPL-GIFNLVSLQHLDISWTGITTLPIE-LKYLVNLKCLNLE 135
+ L+VL L N L+ +P I L +LQ L + IT++P + + LV L+ L L+
Sbjct: 103 GLKELKVLTLQ-NNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLD 161
Query: 136 YTFRLSRIPQQVISDLKMLRALRMFECGFNVELEADSILFGDSXXXXXXXXXXXXXXXXT 195
L+ +P + +S+L L+AL + N+ D F + +
Sbjct: 162 DNI-LTEVPVRPLSNLPTLQALTL--ALNNISSIPD---FAFTNLSSLVVLHLHNNKIKS 215
Query: 196 ITLQSFGALQRL----LSYCRLGSI--STQCL-CLRHLN-NSNSLSVF---AFASLRHLR 244
++ F L L L+Y L + + L L+ L +SNS+SV AFA LR
Sbjct: 216 LSQHCFDGLDNLETLDLNYNNLDEFPQAIKALPSLKELGFHSNSISVIPDGAFAGNPLLR 275
Query: 245 TLQLYFNDL 253
T+ LY N L
Sbjct: 276 TIHLYDNPL 284
Score = 39 (18.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 16/65 (24%), Positives = 25/65 (38%)
Query: 297 YQACPRGLTKFEEHPLKRLECAE--LKELPLDCNHGLEQKI--IIKGQEHWWNELQWDDL 352
Y C G+ + L +C E L P+ C H ++ ++ E W D
Sbjct: 842 YYDC--GMYSHLQGNLTVCDCCESFLLTKPVSCKHLIKSHSCPVLTVASCQRPEAYWSDC 899
Query: 353 STQNA 357
TQ+A
Sbjct: 900 GTQSA 904
>TAIR|locus:2197586 [details] [associations]
symbol:AT1G33600 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0007165 "signal
transduction" evidence=IC] [GO:0005618 "cell wall" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009505 "plant-type cell
wall" evidence=IDA] [GO:0000165 "MAPK cascade" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010310 "regulation
of hydrogen peroxide metabolic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
[GO:0031348 "negative regulation of defense response" evidence=RCA]
[GO:0035304 "regulation of protein dephosphorylation" evidence=RCA]
Pfam:PF00560 InterPro:IPR001611 EMBL:CP002684 GO:GO:0016020
GO:GO:0009505 EMBL:AC069299 HSSP:P25147 InterPro:IPR013210
Pfam:PF08263 HOGENOM:HOG000066206 ProtClustDB:CLSN2679289
IPI:IPI00531467 PIR:H86459 RefSeq:NP_174624.1 UniGene:At.28157
UniGene:At.67613 ProteinModelPortal:Q9FW48 SMR:Q9FW48 STRING:Q9FW48
PRIDE:Q9FW48 EnsemblPlants:AT1G33600.1 GeneID:840254
KEGG:ath:AT1G33600 TAIR:At1g33600 InParanoid:Q9FW48
PhylomeDB:Q9FW48 ArrayExpress:Q9FW48 Genevestigator:Q9FW48
Uniprot:Q9FW48
Length = 478
Score = 120 (47.3 bits), Expect = 0.00025, P = 0.00025
Identities = 41/117 (35%), Positives = 60/117 (51%)
Query: 56 PRLRTLFLPSNHL-GTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWT 114
P L L L N+L GT+ F + L L LS NR +P + N+ L HL++S
Sbjct: 247 PILNYLDLSQNNLSGTIPT-FLSNFKVLDSLDLSRNRFSGVVPKSLANMPKLFHLNLSHN 305
Query: 115 GIT-TLPIELKYLVNLKCLNLEYT-FRLSRIPQQVISDLKMLRALRMFECGFNVELE 169
+T LP +K + L L+L Y F L IP+ V S M +L++ +CG N+ L+
Sbjct: 306 FLTGPLPA-MKNVDGLATLDLSYNQFHLKTIPKWVTSSPSMY-SLKLVKCGINMSLD 360
>UNIPROTKB|E1BG29 [details] [associations]
symbol:GP5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0010544 "negative regulation of platelet activation"
evidence=IEA] [GO:0007160 "cell-matrix adhesion" evidence=IEA]
[GO:0005518 "collagen binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007160
GO:GO:0010544 GeneTree:ENSGT00700000104286 OMA:AMIKIGQ
EMBL:DAAA02001732 EMBL:DAAA02001733 EMBL:DAAA02001734
EMBL:DAAA02001735 IPI:IPI00711271 Ensembl:ENSBTAT00000017571
NextBio:20873574 Uniprot:E1BG29
Length = 583
Score = 121 (47.7 bits), Expect = 0.00026, P = 0.00026
Identities = 76/265 (28%), Positives = 113/265 (42%)
Query: 17 LVLAGVGLTEAPS--IGMWKETTRMSLMQNAIQNLTE--IPTCPRLRTLFLPSNHLGTVS 72
L L+G LT P G+ + ++ L N + +L + + L L L +NHL ++
Sbjct: 175 LDLSGNNLTHLPEGLFGVQVKLQKLLLHSNRLASLESGLLDSLRALTELQLHTNHLRSIV 234
Query: 73 NNFFHSMASLRVLILSYNRSLENLPLGIF-NLVSLQHLDISWTGITTLP-IELKYLVNLK 130
F + SL L LS NR LE LP +F + +L L +S + LP + + L+
Sbjct: 235 PGAFDRLRSLSSLTLSENR-LEFLPSALFLHSHNLTFLTLSENPLEELPKVLFGEIGGLR 293
Query: 131 CLNLEYTFRLSRIPQQVISDLKMLRALRMFECGFNVELEADSILFGDSXXXXXXXXXXXX 190
L L+ T +L +P +L LR L E + L A L D+
Sbjct: 294 ELRLKST-QLRTLPAAAFRNLTGLRVL---EVSLSPRLSA---LPEDAFRGLGELQVLAL 346
Query: 191 XXXXTITLQSFGALQRLLSYCRLGSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYF 250
+L + G L+ L CRL +S LR N +L F +L L +QL
Sbjct: 347 SSTGLASLPA-GLLRGL---CRLRHVS-----LRS-NRLRALPSALFRNLSSLEEVQLDH 396
Query: 251 NDLEELKIDAGE-LKRIREICGFHS 274
N LE L DA E L R+ + H+
Sbjct: 397 NQLETLPGDAFEALPRLAGVLLGHN 421
>MGI|MGI:1315205 [details] [associations]
symbol:Slit2 "slit homolog 2 (Drosophila)" species:10090
"Mus musculus" [GO:0001656 "metanephros development" evidence=IMP]
[GO:0001657 "ureteric bud development" evidence=ISO] [GO:0001701
"in utero embryonic development" evidence=IMP] [GO:0001933
"negative regulation of protein phosphorylation" evidence=ISO]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=ISO] [GO:0002689 "negative regulation of leukocyte
chemotaxis" evidence=ISO] [GO:0005095 "GTPase inhibitor activity"
evidence=ISO] [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006935
"chemotaxis" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007411 "axon guidance" evidence=ISO;IGI;IMP;IDA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0008201 "heparin
binding" evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=IGI] [GO:0009986 "cell surface"
evidence=ISO] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=ISO] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IGI] [GO:0014912 "negative
regulation of smooth muscle cell migration" evidence=ISO]
[GO:0016337 "cell-cell adhesion" evidence=IGI;IMP] [GO:0021772
"olfactory bulb development" evidence=IGI] [GO:0021836
"chemorepulsion involved in postnatal olfactory bulb interneuron
migration" evidence=ISO] [GO:0021972 "corticospinal neuron axon
guidance through spinal cord" evidence=ISO] [GO:0022029
"telencephalon cell migration" evidence=IGI] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030336 "negative regulation of cell
migration" evidence=ISO] [GO:0030837 "negative regulation of actin
filament polymerization" evidence=ISO] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=ISO;IGI;IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI;IMP] [GO:0035385
"Roundabout signaling pathway" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO] [GO:0043086
"negative regulation of catalytic activity" evidence=ISO]
[GO:0043116 "negative regulation of vascular permeability"
evidence=ISO] [GO:0043237 "laminin-1 binding" evidence=ISO]
[GO:0043394 "proteoglycan binding" evidence=ISO] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISO] [GO:0045499
"chemorepellent activity" evidence=IMP] [GO:0048495 "Roundabout
binding" evidence=ISO] [GO:0048754 "branching morphogenesis of an
epithelial tube" evidence=ISO] [GO:0048812 "neuron projection
morphogenesis" evidence=IGI;IMP] [GO:0048846 "axon extension
involved in axon guidance" evidence=ISO] [GO:0050728 "negative
regulation of inflammatory response" evidence=ISO] [GO:0050919
"negative chemotaxis" evidence=ISO;IMP] [GO:0050929 "induction of
negative chemotaxis" evidence=ISO] [GO:0051058 "negative regulation
of small GTPase mediated signal transduction" evidence=ISO]
[GO:0060603 "mammary gland duct morphogenesis" evidence=IGI;IMP]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IMP]
[GO:0070100 "negative regulation of chemokine-mediated signaling
pathway" evidence=ISO] [GO:0071504 "cellular response to heparin"
evidence=ISO] [GO:0071672 "negative regulation of smooth muscle
cell chemotaxis" evidence=ISO] [GO:0071676 "negative regulation of
mononuclear cell migration" evidence=ISO] [GO:0090024 "negative
regulation of neutrophil chemotaxis" evidence=ISO] [GO:0090027
"negative regulation of monocyte chemotaxis" evidence=ISO]
[GO:0090260 "negative regulation of retinal ganglion cell axon
guidance" evidence=ISO] [GO:0090288 "negative regulation of
cellular response to growth factor stimulus" evidence=ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 MGI:MGI:1315205 GO:GO:0005737 GO:GO:0008285
GO:GO:0005615 GO:GO:0009986 GO:GO:0030308 GO:GO:0001701
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005102 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0001656 GO:GO:0010596 GO:GO:0001657 GO:GO:0001933
GO:GO:0048754 GO:GO:0071676 GO:GO:0031290 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 GO:GO:0048846
GO:GO:0021772 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0022029 GO:GO:0033563 GO:GO:0045499 GO:GO:0002042
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0090260 GO:GO:0021836
GO:GO:0061364 HOVERGEN:HBG057959 CTD:9353 KO:K06839 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 EMBL:AF144628
EMBL:AC101004 EMBL:AC113542 EMBL:AC157351 EMBL:AF074960
EMBL:BC059267 IPI:IPI00128415 PIR:T42626 RefSeq:NP_848919.3
UniGene:Mm.289739 ProteinModelPortal:Q9R1B9 SMR:Q9R1B9
STRING:Q9R1B9 PhosphoSite:Q9R1B9 PRIDE:Q9R1B9
Ensembl:ENSMUST00000170109 GeneID:20563 KEGG:mmu:20563
UCSC:uc008xjo.2 InParanoid:Q9R1B9 OrthoDB:EOG4D7Z4T ChiTaRS:SLIT2
NextBio:298857 Bgee:Q9R1B9 CleanEx:MM_SLIT2 Genevestigator:Q9R1B9
Uniprot:Q9R1B9
Length = 1521
Score = 127 (49.8 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 47/165 (28%), Positives = 82/165 (49%)
Query: 15 NFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCP--RLRTLFLPSNHLGTVS 72
N + G GLTE P+ + + T + L QN+I+ + P +LR L L +N + ++
Sbjct: 282 NIVDCRGKGLTEIPT-NLPETITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELA 340
Query: 73 NNFFHSMASLRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIE-LKYLVNLK 130
+ F + SL L+L Y + LP +F L SLQ L ++ I L ++ + L NL
Sbjct: 341 PDAFQGLRSLNSLVL-YGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLN 399
Query: 131 CLNLEYTFRLSRIPQQVISDLKMLRALRM----FECGFNVELEAD 171
L+L Y +L + + S L+ ++ + + F C +++ AD
Sbjct: 400 LLSL-YDNKLQTVAKGTFSALRAIQTMHLAQNPFICDCHLKWLAD 443
Score = 101 (40.6 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 40/143 (27%), Positives = 64/143 (44%)
Query: 21 GVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCP--RLRTLFLPSNHLGTVSNNFFHS 78
G+ L P + + T R+ L N I +T+I LR L L N + T+ F
Sbjct: 43 GLALRSVPR-NIPRNTERLDLNGNNITRITKIDFAGLRHLRVLQLMENRISTIERGAFQD 101
Query: 79 MASLRVLILSYNRSLENLPLGIF-NLVSLQHLDISWTGITTLPIE-LKYLVNLKCLNLEY 136
+ L L L+ N +L+ P +F L LD+S I +P + + V++K L L+Y
Sbjct: 102 LKELERLRLNRN-NLQLFPELLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDY 160
Query: 137 TFRLSRIPQQVISDLKMLRALRM 159
++S I L+ L L +
Sbjct: 161 N-QISCIEDGAFRALRDLEVLTL 182
Score = 73 (30.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 24/66 (36%), Positives = 29/66 (43%)
Query: 214 GSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDLEELKIDAGELKRIREICGFH 273
G S Q L L + N N L V AF L +L L LY N L+ + G +R I H
Sbjct: 370 GLFSLQLLLL-NANKINCLRVDAFQDLHNLNLLSLYDNKLQT--VAKGTFSALRAIQTMH 426
Query: 274 SLQKVF 279
Q F
Sbjct: 427 LAQNPF 432
Score = 40 (19.1 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 218 TQCLCL-RHLNNSNSLSVFAFASLRHLRTLQLYFNDL 253
TQ L L N + F L+ LR L L+ ND+
Sbjct: 793 TQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDI 829
>RGD|628615 [details] [associations]
symbol:Lgr4 "leucine-rich repeat-containing G protein-coupled
receptor 4" species:10116 "Rattus norvegicus" [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0030539 "male genitalia development"
evidence=IEA;ISO] [GO:0035239 "tube morphogenesis" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0050673
"epithelial cell proliferation" evidence=IEA;ISO] [GO:0061290
"canonical Wnt receptor signaling pathway involved in metanephric
kidney development" evidence=IEA;ISO] [GO:0072202 "cell
differentiation involved in metanephros development"
evidence=IEA;ISO] [GO:0072224 "metanephric glomerulus development"
evidence=IEA;ISO] [GO:0072282 "metanephric nephron tubule
morphogenesis" evidence=IEA;ISO] [GO:0090190 "positive regulation
of branching involved in ureteric bud morphogenesis"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 InterPro:IPR017452
Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373 PROSITE:PS00237
PROSITE:PS50262 PROSITE:PS51450 EMBL:AF061443 RGD:628615
GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OrthoDB:EOG476JZH GO:GO:0072202
GO:GO:0072224 HOGENOM:HOG000231829 IPI:IPI00339207
RefSeq:NP_775450.1 UniGene:Rn.162671 ProteinModelPortal:Q9Z2H4
PhosphoSite:Q9Z2H4 GeneID:286994 KEGG:rno:286994 UCSC:RGD:628615
InParanoid:Q9Z2H4 NextBio:625274 ArrayExpress:Q9Z2H4
Genevestigator:Q9Z2H4 GermOnline:ENSRNOG00000005715 Uniprot:Q9Z2H4
Length = 951
Score = 125 (49.1 bits), Expect = 0.00027, Sum P(3) = 0.00026
Identities = 70/249 (28%), Positives = 106/249 (42%)
Query: 20 AGVGLTEAPSIGMWKETTRMSLMQNAIQNLTE--IPTCPRLRTLFLPSNHLGTVSNNFFH 77
+G GLT P G+ T + + N I L E + P L L L N L +
Sbjct: 44 SGKGLTAVPE-GLSAFTQALDISMNNITQLPEDAFKSFPFLEELQLAGNDLSLIHPKALS 102
Query: 78 SMASLRVLILSYNRSLENLPL-GIFNLVSLQHLDISWTGITTLPIE-LKYLVNLKCLNLE 135
+ L+VL L N L +P I L +LQ L + IT++P + + LV L+ L L+
Sbjct: 103 GLKELKVLTLQ-NNQLRTVPSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLD 161
Query: 136 YTFRLSRIPQQVISDLKMLRALRMFECGFNVELEADSILFGDSXXXXXXXXXXXXXXXXT 195
L+ +P + +S+L L+AL + N+ D F + +
Sbjct: 162 DN-SLTEVPVRPLSNLPTLQALTL--ALNNISSIPD---FAFTNLSSLVVLHLHNNKIKS 215
Query: 196 ITLQSFGALQRL----LSYCRLGSI--STQCL-CLRHLN-NSNSLSVF---AFASLRHLR 244
++ F L L L+Y L + + L L+ L +SNS+SV AF LR
Sbjct: 216 LSQHCFDGLDNLETLDLNYNYLDEFPQAIKALPSLKELGFHSNSISVIPDGAFGGNPLLR 275
Query: 245 TLQLYFNDL 253
T+ LY N L
Sbjct: 276 TIHLYDNPL 284
Score = 42 (19.8 bits), Expect = 0.00027, Sum P(3) = 0.00026
Identities = 16/65 (24%), Positives = 25/65 (38%)
Query: 297 YQACPRGLTKFEEHPLKRLECAE--LKELPLDCNHGLEQKI--IIKGQEHWWNELQWDDL 352
Y C G+ + L +C E L P+ C H ++ ++ E W D
Sbjct: 842 YYDC--GMYSHLQGNLTVCDCCESFLLTKPVSCKHLIKSHSCPVLTAASCQRPEAYWSDC 899
Query: 353 STQNA 357
TQ+A
Sbjct: 900 GTQSA 904
Score = 40 (19.1 bits), Expect = 0.00027, Sum P(3) = 0.00026
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 243 LRTLQLYFNDLEELKIDAGELKRIREICGFHSLQKVFYKILK 284
LRTL L +N++ +L G + + EI SLQ+ ++K
Sbjct: 345 LRTLDLSYNNIRDLPSFNG-CRALEEI----SLQRNQISLIK 381
>UNIPROTKB|Q9Z2H4 [details] [associations]
symbol:Lgr4 "Leucine-rich repeat-containing G-protein
coupled receptor 4" species:10116 "Rattus norvegicus" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 EMBL:AF061443
RGD:628615 GO:GO:0016021 GO:GO:0005886 GO:GO:0045892 GO:GO:0045893
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030539
GO:GO:0090190 GO:GO:0050673 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GO:GO:0061290 GO:GO:0072282 CTD:55366
HOVERGEN:HBG031675 KO:K04309 OrthoDB:EOG476JZH GO:GO:0072202
GO:GO:0072224 HOGENOM:HOG000231829 IPI:IPI00339207
RefSeq:NP_775450.1 UniGene:Rn.162671 ProteinModelPortal:Q9Z2H4
PhosphoSite:Q9Z2H4 GeneID:286994 KEGG:rno:286994 UCSC:RGD:628615
InParanoid:Q9Z2H4 NextBio:625274 ArrayExpress:Q9Z2H4
Genevestigator:Q9Z2H4 GermOnline:ENSRNOG00000005715 Uniprot:Q9Z2H4
Length = 951
Score = 125 (49.1 bits), Expect = 0.00027, Sum P(3) = 0.00026
Identities = 70/249 (28%), Positives = 106/249 (42%)
Query: 20 AGVGLTEAPSIGMWKETTRMSLMQNAIQNLTE--IPTCPRLRTLFLPSNHLGTVSNNFFH 77
+G GLT P G+ T + + N I L E + P L L L N L +
Sbjct: 44 SGKGLTAVPE-GLSAFTQALDISMNNITQLPEDAFKSFPFLEELQLAGNDLSLIHPKALS 102
Query: 78 SMASLRVLILSYNRSLENLPL-GIFNLVSLQHLDISWTGITTLPIE-LKYLVNLKCLNLE 135
+ L+VL L N L +P I L +LQ L + IT++P + + LV L+ L L+
Sbjct: 103 GLKELKVLTLQ-NNQLRTVPSEAIHGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLD 161
Query: 136 YTFRLSRIPQQVISDLKMLRALRMFECGFNVELEADSILFGDSXXXXXXXXXXXXXXXXT 195
L+ +P + +S+L L+AL + N+ D F + +
Sbjct: 162 DN-SLTEVPVRPLSNLPTLQALTL--ALNNISSIPD---FAFTNLSSLVVLHLHNNKIKS 215
Query: 196 ITLQSFGALQRL----LSYCRLGSI--STQCL-CLRHLN-NSNSLSVF---AFASLRHLR 244
++ F L L L+Y L + + L L+ L +SNS+SV AF LR
Sbjct: 216 LSQHCFDGLDNLETLDLNYNYLDEFPQAIKALPSLKELGFHSNSISVIPDGAFGGNPLLR 275
Query: 245 TLQLYFNDL 253
T+ LY N L
Sbjct: 276 TIHLYDNPL 284
Score = 42 (19.8 bits), Expect = 0.00027, Sum P(3) = 0.00026
Identities = 16/65 (24%), Positives = 25/65 (38%)
Query: 297 YQACPRGLTKFEEHPLKRLECAE--LKELPLDCNHGLEQKI--IIKGQEHWWNELQWDDL 352
Y C G+ + L +C E L P+ C H ++ ++ E W D
Sbjct: 842 YYDC--GMYSHLQGNLTVCDCCESFLLTKPVSCKHLIKSHSCPVLTAASCQRPEAYWSDC 899
Query: 353 STQNA 357
TQ+A
Sbjct: 900 GTQSA 904
Score = 40 (19.1 bits), Expect = 0.00027, Sum P(3) = 0.00026
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 243 LRTLQLYFNDLEELKIDAGELKRIREICGFHSLQKVFYKILK 284
LRTL L +N++ +L G + + EI SLQ+ ++K
Sbjct: 345 LRTLDLSYNNIRDLPSFNG-CRALEEI----SLQRNQISLIK 381
>ZFIN|ZDB-GENE-030131-6062 [details] [associations]
symbol:lrrc40 "leucine rich repeat containing 40"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-030131-6062 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR025875 Pfam:PF12799 EMBL:AY394934
EMBL:BC055223 IPI:IPI00499633 RefSeq:NP_956156.2 UniGene:Dr.80656
ProteinModelPortal:Q7SXW3 GeneID:334130 KEGG:dre:334130 CTD:55631
HOGENOM:HOG000005761 HOVERGEN:HBG081930 InParanoid:Q7SXW3
OrthoDB:EOG4M65HK NextBio:20810275 ArrayExpress:Q7SXW3
InterPro:IPR015766 PANTHER:PTHR23155:SF28 Uniprot:Q7SXW3
Length = 601
Score = 124 (48.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 58/233 (24%), Positives = 107/233 (45%)
Query: 33 WKET--TRMSLMQNAIQNLTE-IPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSY 89
W++T T++ L N +Q++ + + P L L + N L ++ ++ + L+ LILS+
Sbjct: 77 WEQTDLTKLLLSSNKLQSIPDDVKLLPALVVLDIHDNQLSSLPDSI-GDLEQLQKLILSH 135
Query: 90 NRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYTFRLSRIPQQVIS 149
N+ L LP G++ L +L+ L + I +P +L LVNL L+L L IP+ ++
Sbjct: 136 NK-LTELPSGVWRLTNLRCLHLQQNLIEQIPRDLGQLVNLDELDLSNN-HLIDIPES-LA 192
Query: 150 DLKMLRALRMFECGFNVELEADSILFGDSXXXXXXXXXXXXXXXXTITLQSFGALQRL-L 208
+L+ L L + C +L++ L +L++L L
Sbjct: 193 NLQNLVKLDL-SCN---KLKSLPPAISQMKNLRMLDCSRNQMESIPPVLAQMESLEQLYL 248
Query: 209 SYCRLGSISTQ--CLCLRHLN-NSNSLSVFAFASLRHLRTLQLYFNDLEELKI 258
+ +L + C L+ L+ +N + V L+HL L L +L + K+
Sbjct: 249 RHNKLRYLPELPCCKTLKELHCGNNQIEVLEAEHLKHLNALSLL--ELRDNKV 299
Score = 39 (18.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 240 LRHLRTLQLYFNDLEELKIDAGELKRIREI 269
L+ L L L ND+ L G L +++ +
Sbjct: 309 LQGLERLDLTNNDISSLPCGLGTLPKLKSL 338
>UNIPROTKB|E1BRU5 [details] [associations]
symbol:E1BRU5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005178 "integrin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006605 "protein targeting" evidence=IEA]
[GO:0016323 "basolateral plasma membrane" evidence=IEA] [GO:0030056
"hemidesmosome" evidence=IEA] Pfam:PF00595 InterPro:IPR001611
InterPro:IPR001478 PROSITE:PS50106 PROSITE:PS51450 SMART:SM00228
GO:GO:0005634 GO:GO:0005737 GO:GO:0006605 GO:GO:0016323
SUPFAM:SSF50156 InterPro:IPR025875 Pfam:PF12799 GO:GO:0030056
GeneTree:ENSGT00650000093182 OMA:HNNVRAN EMBL:AADN02045981
EMBL:AADN02045982 EMBL:AADN02045983 EMBL:AADN02045984
EMBL:AADN02045985 EMBL:AADN02045986 EMBL:AADN02045987 EMBL:AC145935
IPI:IPI00819393 ProteinModelPortal:E1BRU5
Ensembl:ENSGALT00000038678 ArrayExpress:E1BRU5 Uniprot:E1BRU5
Length = 1403
Score = 125 (49.1 bits), Expect = 0.00028, P = 0.00028
Identities = 41/129 (31%), Positives = 66/129 (51%)
Query: 21 GVGLTEAPS-IGMWKETTRMSLMQNAIQNLTE-IPTCPRLRTLFLPSNHLGTVSNNFFHS 78
G LT P IG K+ T + + +N I+ + E I C L+ L L SN L + S
Sbjct: 216 GNRLTLIPGFIGTLKQLTYLDVSKNNIEIVEEGISGCESLQDLLLSSNSLQQLPETI-GS 274
Query: 79 MASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYTF 138
+ + L + N+ L LP I LVS++ LD S+ I TLP + L N++ ++ F
Sbjct: 275 LKKVTTLKIDENQ-LIYLPDSIGGLVSVEELDCSFNEIETLPSSVGQLSNIRTFAADHNF 333
Query: 139 RLSRIPQQV 147
L+++P ++
Sbjct: 334 -LTQLPPEI 341
>UNIPROTKB|H3BQ49 [details] [associations]
symbol:LINGO1 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 1" species:9606
"Homo sapiens" [GO:0005154 "epidermal growth factor receptor
binding" evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IEA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA] InterPro:IPR003591
SMART:SM00369 GO:GO:0043491 GO:GO:0031175 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715 HGNC:HGNC:21205
EMBL:AC046168 EMBL:AC105133 EMBL:AC110607 Ensembl:ENST00000561686
Bgee:H3BQ49 Uniprot:H3BQ49
Length = 179
Score = 110 (43.8 bits), Expect = 0.00028, P = 0.00028
Identities = 39/109 (35%), Positives = 57/109 (52%)
Query: 31 GMWKETTRMSLMQNAIQNLT--EIPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILS 88
G+ ET + L +N I+ L E + P L L L N + V F+++ +LR L L
Sbjct: 62 GIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLR 121
Query: 89 YNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIELKY--LVNLKCLNL 134
NR L+ +PLG+F L +L LDIS I L ++ + L NLK L +
Sbjct: 122 SNR-LKLIPLGVFTGLSNLTKLDISENKIVIL-LDYMFQDLYNLKSLEV 168
>RGD|1311979 [details] [associations]
symbol:Lrrc8e "leucine rich repeat containing 8 family, member
E" species:10116 "Rattus norvegicus" [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
RGD:1311979 GO:GO:0016021 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00600000084236 HOGENOM:HOG000231806
HOVERGEN:HBG052360 InterPro:IPR021040 Pfam:PF12534
OrthoDB:EOG4N8R44 CTD:80131 OMA:FINQLCY EMBL:BC105779
IPI:IPI00363454 RefSeq:NP_001029311.1 UniGene:Rn.73867
ProteinModelPortal:Q3KRC6 PhosphoSite:Q3KRC6 PRIDE:Q3KRC6
Ensembl:ENSRNOT00000035142 GeneID:304203 KEGG:rno:304203
UCSC:RGD:1311979 InParanoid:Q3KRC6 NextBio:652693
Genevestigator:Q3KRC6 GermOnline:ENSRNOG00000028460 Uniprot:Q3KRC6
Length = 795
Score = 122 (48.0 bits), Expect = 0.00030, P = 0.00030
Identities = 50/156 (32%), Positives = 76/156 (48%)
Query: 17 LVLAGVGLTEAP----SIGMWKETTRMSLMQNAIQNLTEIPT---CPRLRTLFLPSNHLG 69
L L GL P S+G +E + L N ++++ EI + C +L L L N +
Sbjct: 586 LELVACGLERIPHAIFSLGALQE---LDLKDNHLRSIEEILSFQHCRKLVILRLWHNQIA 642
Query: 70 TVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNL 129
V + + SL L LS+N+ LE LP + L+ LD+S G+ +LP EL L +L
Sbjct: 643 YVPEHV-RKLRSLEQLYLSHNK-LETLPAQLGQCFGLRLLDVSHNGLRSLPPELGLLQSL 700
Query: 130 KCLNLEYTFRLSRIPQQVISDLKMLRALRMFECGFN 165
+ L L Y L +P ++ K LR L + G+N
Sbjct: 701 QHLALSYN-ALESLPDELFFCHK-LRTLLL---GYN 731
>MGI|MGI:1920564 [details] [associations]
symbol:Lrrc69 "leucine rich repeat containing 69"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1920564 eggNOG:COG4886
InterPro:IPR025875 Pfam:PF12799 HSSP:P21793 EMBL:AK006601
EMBL:AK161371 EMBL:AL772236 IPI:IPI00113010 RefSeq:NP_082775.1
UniGene:Mm.52613 ProteinModelPortal:Q9D9Q0 SMR:Q9D9Q0
PhosphoSite:Q9D9Q0 PRIDE:Q9D9Q0 Ensembl:ENSMUST00000023917
Ensembl:ENSMUST00000108276 GeneID:73314 KEGG:mmu:73314
UCSC:uc008sba.1 CTD:100130742 GeneTree:ENSGT00700000104535
HOGENOM:HOG000007755 HOVERGEN:HBG108103 InParanoid:Q9D9Q0
OMA:NTWLECV OrthoDB:EOG447FVC NextBio:337931 Bgee:Q9D9Q0
Genevestigator:Q9D9Q0 Uniprot:Q9D9Q0
Length = 347
Score = 117 (46.2 bits), Expect = 0.00032, P = 0.00032
Identities = 41/131 (31%), Positives = 68/131 (51%)
Query: 28 PSIGMWKETTRMSLMQNAIQNLTE-IPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLI 86
P + + T ++L N +Q + E I L+ L L N + ++ F+ + L +L
Sbjct: 54 PELRTLTQLTLLNLGNNHLQEVPEEIKYLTSLKNLHLFGNRICRIAPGVFNGLHRLIMLN 113
Query: 87 LSYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYTFRLSRIPQQ 146
L+ NR L +LP I L SL +L ++ +T +P EL L +L L+L Y ++ IP++
Sbjct: 114 LNDNR-LTSLPQEIGRLRSLTYLSLNRNNLTVIPKELCSLEHLSELHLNYN-QIVYIPEE 171
Query: 147 VISDLKMLRAL 157
I LK L+ L
Sbjct: 172 -IKFLKNLQQL 181
>RGD|2724 [details] [associations]
symbol:Gp5 "glycoprotein V (platelet)" species:10116 "Rattus
norvegicus" [GO:0005518 "collagen binding" evidence=IEA;ISO]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007160 "cell-matrix
adhesion" evidence=IEA;ISO] [GO:0007596 "blood coagulation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IDA] [GO:0010544
"negative regulation of platelet activation" evidence=IEA;ISO]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 RGD:2724 GO:GO:0016021 GO:GO:0009986 GO:GO:0007596
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007160 InterPro:IPR000372 SMART:SM00013
GO:GO:0010544 CTD:2814 HOGENOM:HOG000112798 HOVERGEN:HBG005906
KO:K06260 OrthoDB:EOG4JHCFD EMBL:Z69594 IPI:IPI00195678
RefSeq:NP_036927.1 UniGene:Rn.138111 ProteinModelPortal:O08770
STRING:O08770 PRIDE:O08770 GeneID:25259 KEGG:rno:25259 UCSC:RGD:2724
InParanoid:O08770 NextBio:605903 Genevestigator:O08770
GermOnline:ENSRNOG00000038540 Uniprot:O08770
Length = 567
Score = 120 (47.3 bits), Expect = 0.00032, P = 0.00032
Identities = 37/127 (29%), Positives = 68/127 (53%)
Query: 37 TRMSLMQNAIQNLTEI--PTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLE 94
TR++L +N ++ L E+ LR L+L HL T+ F +++ L+ L L+ N L
Sbjct: 269 TRLTLFENPLEELPEVLFGEMAGLRELWLNGTHLRTLPAAAFRNLSGLQTLGLTRNPLLS 328
Query: 95 NLPLGIFN-LVSLQHLDISWTGITTLPIE-LKYLVNLKCLNLEYTFRLSRIPQQVISDLK 152
LP G+F+ L L+ L + + LP + L+ L L+ ++L + RL +P+ + +L
Sbjct: 329 ALPPGMFHGLTELRVLAVHTNALEELPEDALRGLGRLRQVSLRHN-RLRALPRTLFRNLS 387
Query: 153 MLRALRM 159
L +++
Sbjct: 388 SLVTVQL 394
>UNIPROTKB|Q96NI6 [details] [associations]
symbol:LRFN5 "Leucine-rich repeat and fibronectin type-III
domain-containing protein 5" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000237343
HOVERGEN:HBG052352 EMBL:AK055365 EMBL:AK096627 EMBL:AL138498
EMBL:BC043165 IPI:IPI00396961 RefSeq:NP_689660.2 UniGene:Hs.136893
ProteinModelPortal:Q96NI6 SMR:Q96NI6 STRING:Q96NI6
PhosphoSite:Q96NI6 DMDM:116242620 PaxDb:Q96NI6 PRIDE:Q96NI6
DNASU:145581 Ensembl:ENST00000298119 GeneID:145581 KEGG:hsa:145581
UCSC:uc001wvm.3 CTD:145581 GeneCards:GC14P042076 HGNC:HGNC:20360
HPA:HPA001177 MIM:612811 neXtProt:NX_Q96NI6 PharmGKB:PA134888453
eggNOG:NOG249839 InParanoid:Q96NI6 KO:K16358 OMA:NAQCCKA
OrthoDB:EOG4X6C81 PhylomeDB:Q96NI6 GenomeRNAi:145581 NextBio:85141
ArrayExpress:Q96NI6 Bgee:Q96NI6 CleanEx:HS_LRFN5
Genevestigator:Q96NI6 GermOnline:ENSG00000165379 InterPro:IPR026879
PANTHER:PTHR24373:SF3 Uniprot:Q96NI6
Length = 719
Score = 121 (47.7 bits), Expect = 0.00034, P = 0.00034
Identities = 38/122 (31%), Positives = 67/122 (54%)
Query: 39 MSLMQNAIQNLTE--IPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENL 96
++L +N I +T LR L L SN L ++N+ F +++L LIL+ N L +
Sbjct: 80 LTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFSGLSNLHHLILN-NNQLTLI 138
Query: 97 PLGIFNLV-SLQHLDISWTGITTLPIE-LKYLVNLKCLNLEYTFRLSRIPQQVISDL-KM 153
F+ V +L+ LD+S+ + T+P + ++ +V+L L+L++ + IP+ S L KM
Sbjct: 139 SSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSLDHNM-IDNIPKGTFSHLHKM 197
Query: 154 LR 155
R
Sbjct: 198 TR 199
>MGI|MGI:2144814 [details] [associations]
symbol:Lrfn5 "leucine rich repeat and fibronectin type III
domain containing 5" species:10090 "Mus musculus" [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
MGI:MGI:2144814 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 MEROPS:I43.001
InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000237343
HOVERGEN:HBG052352 GeneTree:ENSGT00660000095307 CTD:145581
eggNOG:NOG249839 KO:K16358 OMA:NAQCCKA OrthoDB:EOG4X6C81
InterPro:IPR026879 PANTHER:PTHR24373:SF3 EMBL:AK034245
EMBL:AK048443 EMBL:AK220546 EMBL:BC052038 IPI:IPI00226604
IPI:IPI00227586 RefSeq:NP_848829.2 UniGene:Mm.28802
ProteinModelPortal:Q8BXA0 SMR:Q8BXA0 STRING:Q8BXA0
PhosphoSite:Q8BXA0 PaxDb:Q8BXA0 PRIDE:Q8BXA0
Ensembl:ENSMUST00000055815 Ensembl:ENSMUST00000119481 GeneID:238205
KEGG:mmu:238205 UCSC:uc007nqm.1 UCSC:uc007nqn.1 NextBio:383687
Bgee:Q8BXA0 Genevestigator:Q8BXA0 Uniprot:Q8BXA0
Length = 719
Score = 121 (47.7 bits), Expect = 0.00034, P = 0.00034
Identities = 38/122 (31%), Positives = 67/122 (54%)
Query: 39 MSLMQNAIQNLTE--IPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENL 96
++L +N I +T LR L L SN L ++N+ F +++L LIL+ N L +
Sbjct: 80 LTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFSGLSNLHHLILN-NNQLTLI 138
Query: 97 PLGIFNLV-SLQHLDISWTGITTLPIE-LKYLVNLKCLNLEYTFRLSRIPQQVISDL-KM 153
F+ V +L+ LD+S+ + T+P + ++ +V+L L+L++ + IP+ S L KM
Sbjct: 139 SSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSLDHNM-IDNIPKGTFSHLHKM 197
Query: 154 LR 155
R
Sbjct: 198 TR 199
>RGD|1309357 [details] [associations]
symbol:Lrfn5 "leucine rich repeat and fibronectin type III
domain containing 5" species:10116 "Rattus norvegicus" [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 RGD:1309357 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 EMBL:CH473947 CTD:145581 KO:K16358 OrthoDB:EOG4X6C81
InterPro:IPR026879 PANTHER:PTHR24373:SF3 IPI:IPI00367330
RefSeq:NP_001101494.1 UniGene:Rn.224998 ProteinModelPortal:D4A1J9
Ensembl:ENSRNOT00000007520 GeneID:314164 KEGG:rno:314164
NextBio:667230 ArrayExpress:D4A1J9 Uniprot:D4A1J9
Length = 719
Score = 121 (47.7 bits), Expect = 0.00034, P = 0.00034
Identities = 38/122 (31%), Positives = 67/122 (54%)
Query: 39 MSLMQNAIQNLTE--IPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENL 96
++L +N I +T LR L L SN L ++N+ F +++L LIL+ N L +
Sbjct: 80 LTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFSGLSNLHHLILN-NNQLTLI 138
Query: 97 PLGIFNLV-SLQHLDISWTGITTLPIE-LKYLVNLKCLNLEYTFRLSRIPQQVISDL-KM 153
F+ V +L+ LD+S+ + T+P + ++ +V+L L+L++ + IP+ S L KM
Sbjct: 139 SSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSLDHNM-IDNIPKGTFSHLHKM 197
Query: 154 LR 155
R
Sbjct: 198 TR 199
>UNIPROTKB|Q9HBX8 [details] [associations]
symbol:LGR6 "Leucine-rich repeat-containing G-protein
coupled receptor 6" species:9606 "Homo sapiens" [GO:0016500
"protein-hormone receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 GO:GO:0016500 HOVERGEN:HBG031675
EMBL:AF190501 EMBL:AY358119 EMBL:AL356953 EMBL:BC047905
EMBL:AB049405 EMBL:AB083616 EMBL:AK027377 IPI:IPI00151908
IPI:IPI00479360 IPI:IPI00514691 RefSeq:NP_001017403.1
RefSeq:NP_001017404.1 RefSeq:NP_067649.2 UniGene:Hs.497402
ProteinModelPortal:Q9HBX8 SMR:Q9HBX8 STRING:Q9HBX8
PhosphoSite:Q9HBX8 DMDM:158519993 PaxDb:Q9HBX8 PRIDE:Q9HBX8
Ensembl:ENST00000255432 Ensembl:ENST00000367278
Ensembl:ENST00000439764 GeneID:59352 KEGG:hsa:59352 UCSC:uc001gxu.3
UCSC:uc001gxv.3 UCSC:uc001gxw.3 CTD:59352 GeneCards:GC01P202163
HGNC:HGNC:19719 MIM:606653 neXtProt:NX_Q9HBX8 PharmGKB:PA134927114
InParanoid:Q9HBX8 KO:K08399 OrthoDB:EOG4SQWW8 GenomeRNAi:59352
NextBio:65269 ArrayExpress:Q9HBX8 Bgee:Q9HBX8 CleanEx:HS_LGR6
Genevestigator:Q9HBX8 Uniprot:Q9HBX8
Length = 967
Score = 122 (48.0 bits), Expect = 0.00038, P = 0.00038
Identities = 42/150 (28%), Positives = 70/150 (46%)
Query: 17 LVLAGVGLTEAPSIGMWKETTRMSLMQ---NAIQNLTEIPTCPRLRTLFLPSNHLGTVSN 73
L L G+ PS GM ++ R+ +++ N I+ L + C +L + L N + +
Sbjct: 333 LTLTRAGIRLLPS-GMCQQLPRLRVLELSHNQIEELPSLHRCQKLEEIGLQHNRIWEIGA 391
Query: 74 NFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLN 133
+ F ++SL+ L LS+N P L SL LD++ +TTLP L L L L
Sbjct: 392 DTFSQLSSLQALDLSWNAIRSIHPEAFSTLHSLVKLDLTDNQLTTLP--LAGLGGLMHLK 449
Query: 134 LEYTFRLSR-IPQQVISDLKMLRALRMFEC 162
L+ LS+ + L++L ++C
Sbjct: 450 LKGNLALSQAFSKDSFPKLRILEVPYAYQC 479
>UNIPROTKB|Q9NZU0 [details] [associations]
symbol:FLRT3 "Leucine-rich repeat transmembrane protein
FLRT3" species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=NAS] [GO:0030674 "protein binding, bridging" evidence=NAS]
[GO:0005578 "proteinaceous extracellular matrix" evidence=NAS]
[GO:0008150 "biological_process" evidence=ND] [GO:0005057 "receptor
signaling protein activity" evidence=NAS] InterPro:IPR001611
InterPro:IPR003961 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
GO:GO:0005887 GO:GO:0005578 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007155
GO:GO:0030674 EMBL:CH471133 GO:GO:0005057 InterPro:IPR000372
SMART:SM00013 HOVERGEN:HBG051629 KO:K16362 EMBL:AF169677
EMBL:AB040902 EMBL:AK027297 EMBL:AK027670 EMBL:AK027694
EMBL:AY358319 EMBL:AK074909 EMBL:AL132826 EMBL:BC020870
IPI:IPI00002320 RefSeq:NP_037413.1 RefSeq:NP_938205.1
UniGene:Hs.41296 ProteinModelPortal:Q9NZU0 SMR:Q9NZU0 STRING:Q9NZU0
PhosphoSite:Q9NZU0 DMDM:20138400 PaxDb:Q9NZU0 PeptideAtlas:Q9NZU0
PRIDE:Q9NZU0 DNASU:23767 Ensembl:ENST00000341420
Ensembl:ENST00000378053 GeneID:23767 KEGG:hsa:23767 UCSC:uc002wov.2
CTD:23767 GeneCards:GC20M014251 HGNC:HGNC:3762 HPA:CAB026166
MIM:604808 neXtProt:NX_Q9NZU0 PharmGKB:PA28179 InParanoid:Q9NZU0
OMA:SPYRVCM OrthoDB:EOG4NCMCB GenomeRNAi:23767 NextBio:46731
ArrayExpress:Q9NZU0 Bgee:Q9NZU0 CleanEx:HS_FLRT3
Genevestigator:Q9NZU0 GermOnline:ENSG00000125848 Uniprot:Q9NZU0
Length = 649
Score = 120 (47.3 bits), Expect = 0.00039, P = 0.00039
Identities = 41/134 (30%), Positives = 67/134 (50%)
Query: 31 GMWKETTRMSLMQNAIQNLTEIPT-CPR-LRTLFLPSNHLGTVSNNFFHSMASLRVLILS 88
G ++++ + L+ + +L+ IP PR + L L N + T+S+ + SL+ L+L
Sbjct: 148 GAFRDSNYLRLLFLSRNHLSTIPWGLPRTIEELRLDDNRISTISSPSLQGLTSLKRLVLD 207
Query: 89 YNRSLENLPLG---IFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYTFRLSRIPQ 145
N L N LG FNLV+L L + +T P+ L NL+ L L+ ++R+P
Sbjct: 208 GNL-LNNHGLGDKVFFNLVNLTELSLVRNSLTAAPVNLPG-TNLRKLYLQDN-HINRVPP 264
Query: 146 QVISDLKMLRALRM 159
S L+ L L M
Sbjct: 265 NAFSYLRQLYRLDM 278
>TAIR|locus:2180409 [details] [associations]
symbol:PRK6 "pollen receptor like kinase 6" species:3702
"Arabidopsis thaliana" [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0006468 "protein phosphorylation" evidence=IEA;ISS] [GO:0007169
"transmembrane receptor protein tyrosine kinase signaling pathway"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004672 InterPro:IPR013210
Pfam:PF08263 EMBL:AF296832 HOGENOM:HOG000116554 EMBL:FJ708781
IPI:IPI00539126 RefSeq:NP_197569.2 UniGene:At.54932
ProteinModelPortal:Q3E991 SMR:Q3E991 PaxDb:Q3E991 PRIDE:Q3E991
EnsemblPlants:AT5G20690.1 GeneID:832192 KEGG:ath:AT5G20690
GeneFarm:2308 TAIR:At5g20690 InParanoid:Q3E991 OMA:IASNPDE
ProtClustDB:CLSN2684251 Genevestigator:Q3E991 Uniprot:Q3E991
Length = 659
Score = 120 (47.3 bits), Expect = 0.00039, P = 0.00039
Identities = 40/126 (31%), Positives = 65/126 (51%)
Query: 58 LRTLFLPSNHL-GTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGI 116
L++L L +N G + ++FF M+ L+ L L +N+ ++P I L L+ L + +
Sbjct: 121 LKSLMLSNNSFSGEIRDDFFKDMSKLKRLFLDHNKFEGSIPSSITQLPQLEELHMQSNNL 180
Query: 117 T-TLPIELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRALRMFE----CGFNVELEAD 171
T +P E + NLK L+L T L I Q I+D K L A+ + E CG V++ +
Sbjct: 181 TGEIPPEFGSMKNLKVLDLS-TNSLDGIVPQSIADKKNL-AVNLTENEYLCGPVVDVGCE 238
Query: 172 SILFGD 177
+I D
Sbjct: 239 NIELND 244
>UNIPROTKB|P51890 [details] [associations]
symbol:LUM "Lumican" species:9031 "Gallus gallus"
[GO:0007601 "visual perception" evidence=IEA] [GO:0030199 "collagen
fibril organization" evidence=IEA] [GO:0005518 "collagen binding"
evidence=IEA] [GO:0005583 "fibrillar collagen" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR027219 PROSITE:PS51450 GO:GO:0005615 GO:GO:0045944
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0005583
GeneTree:ENSGT00600000084286 HOGENOM:HOG000234447
HOVERGEN:HBG108061 CTD:4060 KO:K08122 OMA:LHINYNN OrthoDB:EOG4CZBGK
PANTHER:PTHR24371:SF1 EMBL:M80584 IPI:IPI00592361 PIR:A41748
RefSeq:XP_416135.1 UniGene:Gga.4078 ProteinModelPortal:P51890
PRIDE:P51890 Ensembl:ENSGALT00000018392 GeneID:417891
KEGG:gga:417891 InParanoid:P51890 NextBio:20821127 Uniprot:P51890
Length = 343
Score = 116 (45.9 bits), Expect = 0.00040, P = 0.00040
Identities = 27/101 (26%), Positives = 54/101 (53%)
Query: 31 GMWKETTRMSLMQNAIQNLTEIPT-CPR-LRTLFLPSNHLGTVSNNFFHSMASLRVLILS 88
G +K + + + LT++PT P L L+ +N + + + +F +L+ L LS
Sbjct: 183 GAFKGLNSLLYLDLSFNQLTKLPTGLPHSLLMLYFDNNQISNIPDEYFQGFKTLQYLRLS 242
Query: 89 YNRSLEN-LPLGIFNLVSLQHLDISWTGITTLPIELKYLVN 128
+N+ ++ +P +FN+ SL LD+S+ + ++P + L N
Sbjct: 243 HNKLTDSGIPGNVFNITSLVELDLSFNQLKSIPTVSENLEN 283
>UNIPROTKB|F1NZH1 [details] [associations]
symbol:SLITRK6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00680000099859 OMA:YFELKAN
EMBL:AADN02029493 EMBL:AADN02029494 EMBL:AADN02029495
IPI:IPI00573056 Ensembl:ENSGALT00000027325 Uniprot:F1NZH1
Length = 826
Score = 121 (47.7 bits), Expect = 0.00041, P = 0.00041
Identities = 43/116 (37%), Positives = 59/116 (50%)
Query: 41 LMQNAIQNLTEIPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLPLGI 100
L + A NLT RL+ L+L NHL +S N F + L L L YN E LP G
Sbjct: 400 LEEGAFMNLT------RLQKLYLNGNHLTKLSQNLFLGLQHLEYLYLEYNAIKEVLP-GT 452
Query: 101 FNLV-SLQHLDISWTGITTLPIELKYLVNLKCLNLEYTFRLSRIP-QQVISDLKML 154
FN + L+ L ++ + TLP + V L LNL+ T + S +P V+ +L ML
Sbjct: 453 FNTMPKLKVLYLNNNLLQTLPPHIFSGVPLARLNLK-TNQFSHLPVSNVLDELDML 507
>TAIR|locus:2149922 [details] [associations]
symbol:EFR "EF-TU receptor" species:3702 "Arabidopsis
thaliana" [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006468 "protein
phosphorylation" evidence=IEA;ISS] [GO:0007169 "transmembrane
receptor protein tyrosine kinase signaling pathway" evidence=ISS]
[GO:0016301 "kinase activity" evidence=ISS] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0016045 "detection
of bacterium" evidence=RCA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0002764 "immune response-regulating signaling
pathway" evidence=IMP] [GO:0009626 "plant-type hypersensitive
response" evidence=IMP] [GO:0019199 "transmembrane receptor protein
kinase activity" evidence=TAS] [GO:0010359 "regulation of anion
channel activity" evidence=IMP] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009581 "detection of external stimulus"
evidence=RCA] [GO:0009595 "detection of biotic stimulus"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
acid mediated signaling pathway" evidence=RCA] [GO:0009867
"jasmonic acid mediated signaling pathway" evidence=RCA]
[GO:0010200 "response to chitin" evidence=RCA] [GO:0010310
"regulation of hydrogen peroxide metabolic process" evidence=RCA]
[GO:0010363 "regulation of plant-type hypersensitive response"
evidence=RCA] [GO:0031347 "regulation of defense response"
evidence=RCA] [GO:0031348 "negative regulation of defense response"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0043900 "regulation of multi-organism process"
evidence=RCA] [GO:0050776 "regulation of immune response"
evidence=RCA] [GO:0050832 "defense response to fungus"
evidence=RCA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000719
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
GO:GO:0016021 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0016045 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.60.120.200 InterPro:IPR013320 GO:GO:0019199 GO:GO:0009626
EMBL:AF296833 HOGENOM:HOG000116551 InterPro:IPR013210 Pfam:PF08263
GO:GO:0010204 GO:GO:0002764 GO:GO:0010359 EMBL:AY075690
EMBL:BT005820 EMBL:FJ708780 EMBL:AK226237 IPI:IPI00541978
RefSeq:NP_197548.1 UniGene:At.31176 ProteinModelPortal:C0LGT6
SMR:C0LGT6 STRING:C0LGT6 PaxDb:C0LGT6 PRIDE:C0LGT6
EnsemblPlants:AT5G20480.1 GeneID:832170 KEGG:ath:AT5G20480
GeneFarm:2543 TAIR:At5g20480 InParanoid:Q8S9I3 KO:K13428
OMA:TESPRDA PhylomeDB:C0LGT6 ProtClustDB:CLSN2916707 Uniprot:C0LGT6
Length = 1031
Score = 122 (48.0 bits), Expect = 0.00042, P = 0.00042
Identities = 39/152 (25%), Positives = 67/152 (44%)
Query: 23 GLTEAPSIGMWKETTRMSLMQNAIQNL--TEIPTCPRLRTLFLPSNHLGTVSNNFFHSMA 80
G T +G +++ N ++ + + C RL T+ L SNHLG + S++
Sbjct: 110 GSTIPQKVGRLFRLQYLNMSYNLLEGRIPSSLSNCSRLSTVDLSSNHLGHGVPSELGSLS 169
Query: 81 SLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGIT-TLPIELKYLVNLKCLNLEYTFR 139
L +L LS N N P + NL SLQ LD ++ + +P E+ L + +
Sbjct: 170 KLAILDLSKNNLTGNFPASLGNLTSLQKLDFAYNQMRGEIPDEVARLTQMVFFQIALNSF 229
Query: 140 LSRIPQQVISDLKMLRALRMFECGFNVELEAD 171
P + ++ L +L + + F+ L AD
Sbjct: 230 SGGFPP-ALYNISSLESLSLADNSFSGNLRAD 260
>UNIPROTKB|Q96AG4 [details] [associations]
symbol:LRRC59 "Leucine-rich repeat-containing protein 59"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005635 "nuclear envelope" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0016021
GO:GO:0005635 GO:GO:0005789 eggNOG:COG4886 GO:GO:0042645
EMBL:CH471109 CTD:55379 HOVERGEN:HBG081933 OMA:SDFCSLT
OrthoDB:EOG4Z62PR EMBL:BC017168 EMBL:BC052279 EMBL:AK316593
EMBL:AF119857 IPI:IPI00396321 RefSeq:NP_060979.2 UniGene:Hs.370927
ProteinModelPortal:Q96AG4 SMR:Q96AG4 IntAct:Q96AG4
MINT:MINT-5003397 STRING:Q96AG4 PhosphoSite:Q96AG4 DMDM:74760704
PaxDb:Q96AG4 PeptideAtlas:Q96AG4 PRIDE:Q96AG4 DNASU:55379
Ensembl:ENST00000225972 GeneID:55379 KEGG:hsa:55379 UCSC:uc002iqt.3
GeneCards:GC17M048458 H-InvDB:HIX0013977 HGNC:HGNC:28817
HPA:HPA030827 HPA:HPA030829 MIM:614854 neXtProt:NX_Q96AG4
PharmGKB:PA142671518 HOGENOM:HOG000110564 InParanoid:Q96AG4
PhylomeDB:Q96AG4 ChiTaRS:LRRC59 GenomeRNAi:55379 NextBio:59772
ArrayExpress:Q96AG4 Bgee:Q96AG4 CleanEx:HS_LRRC59
Genevestigator:Q96AG4 GermOnline:ENSG00000108829 Uniprot:Q96AG4
Length = 307
Score = 115 (45.5 bits), Expect = 0.00042, P = 0.00042
Identities = 32/85 (37%), Positives = 46/85 (54%)
Query: 51 EIPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLD 110
E+ P+ L L N L T+ ++F + L L LS N+ L+ LP LV+LQHLD
Sbjct: 34 ELAALPKATILDLSCNKLTTLPSDFC-GLTHLVKLDLSKNK-LQQLPADFGRLVNLQHLD 91
Query: 111 ISWTGITTLPIELKYLVNLKCLNLE 135
+ + TLP+ L NLK L+L+
Sbjct: 92 LLNNKLVTLPVSFAQLKNLKWLDLK 116
>UNIPROTKB|F1S8Z0 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0033563
"dorsal/ventral axon guidance" evidence=IEA] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IEA] [GO:0022028 "tangential
migration from the subventricular zone to the olfactory bulb"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045
PROSITE:PS01186 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
OMA:KCVHGKC EMBL:FP340446 ProteinModelPortal:F1S8Z0
Ensembl:ENSSSCT00000011502 Uniprot:F1S8Z0
Length = 1397
Score = 116 (45.9 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 44/159 (27%), Positives = 79/159 (49%)
Query: 21 GVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCP--RLRTLFLPSNHLGTVSNNFFHS 78
G GLT P+ + + T + L N I+++ P +LR + L +N + ++ + F
Sbjct: 161 GKGLTAIPA-NLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQG 219
Query: 79 MASLRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTL-PIELKYLVNLKCLNLEY 136
+ SL L+L Y + +LP G+F L +LQ L ++ I + P + L NL L+L Y
Sbjct: 220 LRSLNSLVL-YGNKITDLPRGVFGGLFTLQLLLLNANKINCVRPDAFQDLQNLSLLSL-Y 277
Query: 137 TFRLSRIPQQVISDLKMLRALRM----FECGFNVELEAD 171
++ + + + L+ ++ L + F C N+ L AD
Sbjct: 278 DNKIQGLAKGTFTSLRAIQTLHLAQNPFICDCNLWL-AD 315
Score = 54 (24.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 209 SYCRLGSISTQCLCLRHLNNSNSLSVFAFASLRHLRTLQLYFNDLEELK 257
S+ + ++T L L + N + AF LR LR L L+ ND+ L+
Sbjct: 666 SFTNMSQLTT--LILSY-NALQCIPPLAFQGLRSLRLLSLHGNDISTLQ 711
>TAIR|locus:2020382 [details] [associations]
symbol:RLP3 "AT1G17250" species:3702 "Arabidopsis
thaliana" [GO:0004672 "protein kinase activity" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0007165 "signal
transduction" evidence=IC] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:COG4886 InterPro:IPR025875 Pfam:PF12799 HOGENOM:HOG000116551
InterPro:IPR013210 Pfam:PF08263 EMBL:AC007651
ProtClustDB:CLSN2681887 IPI:IPI00517602 PIR:G86308
RefSeq:NP_173168.1 UniGene:At.41846 UniGene:At.73089
ProteinModelPortal:Q9SHI4 SMR:Q9SHI4 EnsemblPlants:AT1G17250.1
GeneID:838296 KEGG:ath:AT1G17250 TAIR:At1g17250 InParanoid:Q9SHI4
OMA:INDDITH PhylomeDB:Q9SHI4 Genevestigator:Q9SHI4 Uniprot:Q9SHI4
Length = 756
Score = 120 (47.3 bits), Expect = 0.00047, P = 0.00047
Identities = 45/137 (32%), Positives = 70/137 (51%)
Query: 38 RMSLMQNAIQNLT-EIPT----CPRLRTLFLPSNHL-GTVSNNFFHSMASLRVLILSYNR 91
++S++Q N++ EIP+ L LFLP NHL G ++++ H + L+ L L N
Sbjct: 252 KLSVLQAGFNNISGEIPSDIYNLSELEQLFLPVNHLSGKINDDITH-LTKLKSLELYSNH 310
Query: 92 SLENLPLGIFNLVSLQHLDISWTGIT-TLPIELKYLVNLKCLNLEYTFRLSRIPQQVISD 150
+P+ I L LQ L + IT T+P L NL LNL RL+R+ + +S+
Sbjct: 311 LGGEIPMDIGQLSRLQSLQLHINNITGTVPPSLANCTNLVKLNL----RLNRL-EGTLSE 365
Query: 151 LKMLR--ALRMFECGFN 165
L R +L + + G N
Sbjct: 366 LDFSRFQSLSILDLGNN 382
>UNIPROTKB|F1RW91 [details] [associations]
symbol:RXFP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060658 "nipple morphogenesis" evidence=IEA]
[GO:0060427 "lung connective tissue development" evidence=IEA]
[GO:0042562 "hormone binding" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007567 "parturition"
evidence=IEA] [GO:0007188 "adenylate cyclase-modulating G-protein
coupled receptor signaling pathway" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002172 InterPro:IPR008112
InterPro:IPR017452 Pfam:PF00001 Pfam:PF00057 PRINTS:PR00237
PRINTS:PR01739 PROSITE:PS50068 PROSITE:PS50262 PROSITE:PS51450
SMART:SM00192 GO:GO:0016021 GO:GO:0030154 GO:GO:0004930
InterPro:IPR003591 SMART:SM00369 GO:GO:0030198 GO:GO:0042562
GO:GO:0007188 Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 GO:GO:0007567 InterPro:IPR000372 SMART:SM00013
GO:GO:0060427 OMA:YTLTTRP GO:GO:0060658
GeneTree:ENSGT00650000093266 EMBL:CU896689 EMBL:AEMK01185779
EMBL:CU467602 Ensembl:ENSSSCT00000009716 Uniprot:F1RW91
Length = 770
Score = 120 (47.3 bits), Expect = 0.00048, P = 0.00048
Identities = 46/158 (29%), Positives = 74/158 (46%)
Query: 17 LVLAGVGLTEAPSIGMWKETTRMSLMQ---NAIQNLTEIP--TCPRLRTLFLPSNHLGTV 71
LVL LT P + + R+ + N I NL + +C L L + N + +
Sbjct: 239 LVLMNNVLTHLPDKPLCQHMPRLHWLDFEGNHIHNLRNLTFISCSNLTVLVMRKNKINHL 298
Query: 72 SNNFFHSMASLRVLILSYNRSLENLPLGIF-NLVSLQHLDISWTGITTLPI-ELKYLVNL 129
+ N F + L L L N+ +ENL +F +L L L++S+ I + + YLV L
Sbjct: 299 NENTFAPLQKLDELDLGSNK-IENLSPHVFKDLKELSQLNLSYNPIQKIQANQFDYLVKL 357
Query: 130 KCLNLEYTFRLSRIPQQVISDLKMLRAL--RMFE-CGF 164
K L+LE +S I Q++ L L + + F+ CG+
Sbjct: 358 KSLSLE-GLEISNIQQRMFRPLTNLSHIYFKKFQYCGY 394
>UNIPROTKB|E1BKT3 [details] [associations]
symbol:Bt.110205 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0030056 "hemidesmosome" evidence=IEA] [GO:0016323
"basolateral plasma membrane" evidence=IEA] [GO:0006605 "protein
targeting" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005178 "integrin binding"
evidence=IEA] Pfam:PF00595 InterPro:IPR001611 InterPro:IPR001478
PROSITE:PS50106 PROSITE:PS51450 SMART:SM00228 GO:GO:0005634
GO:GO:0005737 GO:GO:0006605 GO:GO:0016323 SUPFAM:SSF50156
InterPro:IPR025875 Pfam:PF12799 GO:GO:0030056
GeneTree:ENSGT00650000093182 OMA:HNNVRAN EMBL:DAAA02050134
EMBL:DAAA02050135 IPI:IPI00837830 Ensembl:ENSBTAT00000000533
Uniprot:E1BKT3
Length = 1460
Score = 123 (48.4 bits), Expect = 0.00048, P = 0.00048
Identities = 38/129 (29%), Positives = 65/129 (50%)
Query: 21 GVGLTEAPS-IGMWKETTRMSLMQNAIQNLTE-IPTCPRLRTLFLPSNHLGTVSNNFFHS 78
G LT P IG K+ T + + +N I+ + E I C L+ L L SN L + S
Sbjct: 216 GNRLTFIPGFIGSLKQLTYLDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLPETI-GS 274
Query: 79 MASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYTF 138
+ ++ L + N+ L LP I LVS++ LD S+ + LP + L N++ ++ +
Sbjct: 275 LKNVTTLKIDENQ-LMYLPDSIGGLVSIEELDCSFNELEALPSSIGQLTNIRTFAADHNY 333
Query: 139 RLSRIPQQV 147
L ++P ++
Sbjct: 334 -LQQLPPEI 341
>RGD|1308170 [details] [associations]
symbol:Cd180 "CD180 molecule" species:10116 "Rattus norvegicus"
[GO:0002322 "B cell proliferation involved in immune response"
evidence=ISO] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=ISO]
[GO:0071222 "cellular response to lipopolysaccharide" evidence=ISO]
RGD:1308170 InterPro:IPR000483 SMART:SM00082 CTD:4064 KO:K06555
OrthoDB:EOG4W3SMG GeneTree:ENSGT00700000104185 OMA:TEAFKEC
EMBL:CH473955 IPI:IPI00360317 RefSeq:NP_001099875.1
UniGene:Rn.148663 Ensembl:ENSRNOT00000013768 GeneID:294706
KEGG:rno:294706 UCSC:RGD:1308170 NextBio:638441 Uniprot:D3ZIP2
Length = 662
Score = 119 (46.9 bits), Expect = 0.00051, P = 0.00051
Identities = 66/248 (26%), Positives = 108/248 (43%)
Query: 17 LVLAGVGLTEAPS--IGMWKETTRMSLMQNAIQNLTEIPTC--PRLRTLFLPSNHLGT-V 71
L L LTE PS +G+ K ++ L N +NL +I P L L++ N +
Sbjct: 304 LDLTATHLTELPSGIVGLSK-LKKLVLSANKFENLCQISASNFPSLTHLYIKGNTKRLEL 362
Query: 72 SNNFFHSMASLRVLILSYN--RSLENLPLGIFNLVSLQHLDISWTGITTLPIE-LKYLVN 128
+ ++ LR L LS++ + + L + NL LQ L++S+ L E K
Sbjct: 363 GSGCLETLEHLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLGLRTEAFKECPQ 422
Query: 129 LKCLNLEYTFRLSRIPQQVISDLKMLRALRMFEC--GFNVELEADSILFGDSXXXXXXXX 186
L+ L+L +T + Q +L +L+ L + C G + + D L
Sbjct: 423 LELLDLAFTRLHVKDAQSPFQNLHLLKVLNLSHCLLGSSNQHLLDG-LPALRHLNLQGNR 481
Query: 187 XXXXXXXXTITLQSFGALQRL-LSYCRLGSISTQCLC----LRHLNNS-NSLSVFAFASL 240
T LQ+ G+L+ L LS+C L SI Q + H++ S N L+ + +L
Sbjct: 482 FPNGNIQKTNPLQALGSLEILILSFCDLSSIDHQAFINLKIMNHVDLSHNRLTSSSIEAL 541
Query: 241 RHLRTLQL 248
HL+ + L
Sbjct: 542 SHLKGIYL 549
>TAIR|locus:2117617 [details] [associations]
symbol:PIRL4 "plant intracellular ras group-related LRR
4" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005886 EMBL:CP002687
GenomeReviews:CT486007_GR eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR025875 Pfam:PF12799 EMBL:AL161587
EMBL:AL117188 HSSP:P07359 HOGENOM:HOG000242894
ProtClustDB:CLSN2683891 EMBL:AY072324 EMBL:AY128730 EMBL:AY849574
IPI:IPI00541009 PIR:T41744 RefSeq:NP_195272.1 UniGene:At.22486
ProteinModelPortal:Q9SVW8 SMR:Q9SVW8 IntAct:Q9SVW8 STRING:Q9SVW8
PaxDb:Q9SVW8 PRIDE:Q9SVW8 EnsemblPlants:AT4G35470.1 GeneID:829699
KEGG:ath:AT4G35470 TAIR:At4g35470 InParanoid:Q9SVW8 OMA:ILSVRYN
PhylomeDB:Q9SVW8 Genevestigator:Q9SVW8 Uniprot:Q9SVW8
Length = 549
Score = 118 (46.6 bits), Expect = 0.00051, P = 0.00051
Identities = 76/275 (27%), Positives = 118/275 (42%)
Query: 29 SIGMWKETTRMSLMQNAIQNLTE-IPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLIL 87
S+G T + L +N I L I L L L SN +G + + + +L L L
Sbjct: 241 SLGKLSSLTSLDLSENHIVVLPNTIGGLSSLTKLDLHSNRIGQLPESI-GELLNLVYLNL 299
Query: 88 SYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYTFRLSRIPQQV 147
N+ L +LP LV L+ LD+S + LP + LV+LK L++E T + IP +
Sbjct: 300 GSNQ-LSSLPSAFSRLVRLEELDLSCNNLPILPESIGSLVSLKKLDVE-TNDIEEIPYSI 357
Query: 148 --ISDLKMLRALRMFECGFNVELEADSILFGDSXXXXXXXXXXXXXXXXTITLQSFGALQ 205
S L LRA +N +L+A G T+ S +L+
Sbjct: 358 GGCSSLIELRA------DYN-KLKALPEAIGKITTLEILSVRYNNIRQLPTTMSSLASLK 410
Query: 206 RL-LSYCRLGSISTQCLC----LRHLNNSNSLSVFAFASL-RHLRTLQLYFNDLEELKID 259
L +S+ L S+ + LC L LN N+ + SL R + L++ LEEL I
Sbjct: 411 ELDVSFNELESVP-ESLCFATTLVKLNIGNNFA--DMVSLPRSIGNLEM----LEELDIS 463
Query: 260 AGELKRIREICGFHSLQKVFY---KILKIEARDMA 291
+++ + + + +VF L I RD+A
Sbjct: 464 NNQIRVLPDSFKMLTKLRVFRAQENPLHIPPRDIA 498
>UNIPROTKB|D6RHW6 [details] [associations]
symbol:TLR10 "Toll-like receptor 10" species:9606 "Homo
sapiens" [GO:0002755 "MyD88-dependent toll-like receptor signaling
pathway" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0034166 "toll-like receptor 10 signaling pathway"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0050707 "regulation of cytokine secretion" evidence=IEA]
[GO:0050729 "positive regulation of inflammatory response"
evidence=IEA] InterPro:IPR027182 EMBL:AC108044
PANTHER:PTHR24365:SF131 HGNC:HGNC:15634 EMBL:AC118137
IPI:IPI00967572 ProteinModelPortal:D6RHW6 SMR:D6RHW6
Ensembl:ENST00000502321 ArrayExpress:D6RHW6 Bgee:D6RHW6
Uniprot:D6RHW6
Length = 94
Score = 94 (38.1 bits), Expect = 0.00054, P = 0.00054
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 41 LMQNAIQ-NLTEIPT--CPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLP 97
LM N +L ++P P TL L N L + ++ FHS++ LRVLIL +NR ++ L
Sbjct: 16 LMTNCSNMSLRKVPADLTPATTTLDLSYNLLFQLQSSDFHSVSKLRVLILCHNR-IQQLD 74
Query: 98 LGIFNL-VSLQHLDIS 112
L F L++LD+S
Sbjct: 75 LKTFEFNKELRYLDLS 90
>TAIR|locus:2091672 [details] [associations]
symbol:AT3G14470 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0006952
"defense response" evidence=IEA;ISS] [GO:0043531 "ADP binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009627 "systemic acquired resistance" evidence=RCA]
[GO:0009697 "salicylic acid biosynthetic process" evidence=RCA]
InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931 PRINTS:PR00364
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006952
GO:GO:0043531 EMBL:AB028617 HOGENOM:HOG000238375 IPI:IPI00528279
RefSeq:NP_188065.1 UniGene:At.39233 ProteinModelPortal:Q9LRR4
SMR:Q9LRR4 IntAct:Q9LRR4 STRING:Q9LRR4 PaxDb:Q9LRR4 PRIDE:Q9LRR4
EnsemblPlants:AT3G14470.1 GeneID:820670 KEGG:ath:AT3G14470
TAIR:At3g14470 eggNOG:NOG280712 InParanoid:Q9LRR4 OMA:ASIMCAV
PhylomeDB:Q9LRR4 ProtClustDB:CLSN2915574 Genevestigator:Q9LRR4
GermOnline:AT3G14470 Uniprot:Q9LRR4
Length = 1054
Score = 121 (47.7 bits), Expect = 0.00055, P = 0.00055
Identities = 36/110 (32%), Positives = 61/110 (55%)
Query: 52 IPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDI 111
+PT RLR L L + + +FF +++ R L LS LE LP + + +LQ L +
Sbjct: 574 LPTLTRLRVLSLSHYKIARLPPDFFKNISHARFLDLS-RTELEKLPKSLCYMYNLQTLLL 632
Query: 112 SW-TGITTLPIELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRALRMF 160
S+ + + LP ++ L+NL+ L+L T +L ++P++ LK L+ L F
Sbjct: 633 SYCSSLKELPTDISNLINLRYLDLIGT-KLRQMPRR-FGRLKSLQTLTTF 680
>MGI|MGI:2685197 [details] [associations]
symbol:Lrrc55 "leucine rich repeat containing 55"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2685197 GO:GO:0016021
GO:GO:0005886 InterPro:IPR000483 SMART:SM00082 GO:GO:0005216
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 HOGENOM:HOG000113369
GeneTree:ENSGT00700000104451 CTD:219527 eggNOG:NOG244842
HOVERGEN:HBG081932 OrthoDB:EOG4NS3BS EMBL:AK134968 IPI:IPI00352775
RefSeq:NP_001028518.1 UniGene:Mm.291095 UniGene:Mm.476412
ProteinModelPortal:Q3UY51 SMR:Q3UY51 PhosphoSite:Q3UY51
PRIDE:Q3UY51 Ensembl:ENSMUST00000099930 Ensembl:ENSMUST00000111601
GeneID:241528 KEGG:mmu:241528 UCSC:uc008kkc.1 InParanoid:Q3UY51
OMA:TANCCHR NextBio:385045 Bgee:Q3UY51 CleanEx:MM_LRRC55
Genevestigator:Q3UY51 Uniprot:Q3UY51
Length = 311
Score = 114 (45.2 bits), Expect = 0.00056, P = 0.00056
Identities = 48/160 (30%), Positives = 74/160 (46%)
Query: 16 FLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPT-CPR-LRTLFLPSNHLGTVSN 73
FL+ AGV ++A + T R ++ + Q L +P P R L L N + V
Sbjct: 36 FLLAAGVMHSDAGTSCPVLCTCRNQVVDCSNQRLFSVPPDLPMDTRNLSLAHNRIAAVPP 95
Query: 74 NFFHSMASLRVLILSYNRSLENLPLGIF-NLVSLQHLDISWTGITTLPIEL-KYLVNLKC 131
+ LRVL L N SL LP G+F + L HLD+S+ ++ +P ++ + L
Sbjct: 96 GYLTCYMELRVLDLR-NNSLMELPPGLFLHAKRLAHLDLSYNNLSHVPADMFREAHGLVH 154
Query: 132 LNLEYTFRLSRIPQQVISDLKMLRALRMFECGFN-VELEA 170
++L + L R+ Q L LR L + G + LEA
Sbjct: 155 IDLSHNPWLRRVHPQAFQGLVHLRDLDLSYGGLAFLSLEA 194
>RGD|1561726 [details] [associations]
symbol:Lrrc55 "leucine rich repeat containing 55" species:10116
"Rattus norvegicus" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
RGD:1561726 GO:GO:0016021 GO:GO:0005886 InterPro:IPR000483
SMART:SM00082 GO:GO:0005216 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 HOGENOM:HOG000113369 GeneTree:ENSGT00700000104451
CTD:219527 eggNOG:NOG244842 HOVERGEN:HBG081932 OrthoDB:EOG4NS3BS
EMBL:BC099134 IPI:IPI00362839 RefSeq:NP_001116447.1
UniGene:Rn.209245 ProteinModelPortal:Q4KLL3
Ensembl:ENSRNOT00000031745 GeneID:311171 KEGG:rno:311171
UCSC:RGD:1561726 InParanoid:Q4KLL3 NextBio:663112
Genevestigator:Q4KLL3 Uniprot:Q4KLL3
Length = 311
Score = 114 (45.2 bits), Expect = 0.00056, P = 0.00056
Identities = 48/160 (30%), Positives = 74/160 (46%)
Query: 16 FLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPT-CPR-LRTLFLPSNHLGTVSN 73
FL+ AGV ++A + T R ++ + Q L +P P R L L N + V
Sbjct: 36 FLLAAGVMHSDAGASCPVLCTCRNQVVDCSNQRLFSVPPDLPMDTRNLSLAHNRIAAVPP 95
Query: 74 NFFHSMASLRVLILSYNRSLENLPLGIF-NLVSLQHLDISWTGITTLPIEL-KYLVNLKC 131
+ LRVL L N SL LP G+F + L HLD+S+ ++ +P ++ + L
Sbjct: 96 GYLTCYMELRVLDLR-NNSLMELPPGLFLHAKRLAHLDLSYNNLSHVPADMFREAHGLVH 154
Query: 132 LNLEYTFRLSRIPQQVISDLKMLRALRMFECGFN-VELEA 170
++L + L R+ Q L LR L + G + LEA
Sbjct: 155 IDLSHNPWLRRVHPQAFQGLVHLRDLDLSYGGLAFLSLEA 194
>UNIPROTKB|A6H701 [details] [associations]
symbol:LRRTM2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050808 "synapse organization" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00700000104056
HOGENOM:HOG000290681 HOVERGEN:HBG052362 CTD:26045 OMA:IRQCSMI
OrthoDB:EOG4PG60Z EMBL:DAAA02020406 EMBL:BC146061 IPI:IPI00709063
RefSeq:NP_001092847.1 UniGene:Bt.55901 Ensembl:ENSBTAT00000018866
GeneID:520949 KEGG:bta:520949 InParanoid:A6H701 NextBio:20873206
Uniprot:A6H701
Length = 516
Score = 117 (46.2 bits), Expect = 0.00060, P = 0.00060
Identities = 42/128 (32%), Positives = 66/128 (51%)
Query: 34 KETTRMSLMQNAIQNLT--EIPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNR 91
K + +SL N I L + + +L L L N + TV + F + L+ LILS N+
Sbjct: 61 KGSLGLSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNK 120
Query: 92 SLENLPLGIFN-LVSLQHLDISWTGITTLPIELKY-LVNLKCLNLEYTFRLSRIPQQVIS 149
+ LP F L++LQ+LD+S+ +++L EL Y L L+ L+L L IP ++
Sbjct: 121 -IFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSN-SLRTIPVRLFW 178
Query: 150 DLKMLRAL 157
D + L L
Sbjct: 179 DCRSLEFL 186
>UNIPROTKB|O43300 [details] [associations]
symbol:LRRTM2 "Leucine-rich repeat transmembrane neuronal
protein 2" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0042043 "neurexin family protein binding" evidence=IEA]
[GO:0050808 "synapse organization" evidence=IEA] [GO:0060076
"excitatory synapse" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875
Pfam:PF12799 UniGene:Hs.656653 CleanEx:HS_LRRN2
HOGENOM:HOG000290681 HOVERGEN:HBG052362 EMBL:AY182026 EMBL:AB007876
EMBL:AK291064 EMBL:BC126408 EMBL:BC126410 EMBL:BC143926
IPI:IPI00023576 RefSeq:NP_056379.1 ProteinModelPortal:O43300
SMR:O43300 STRING:O43300 PhosphoSite:O43300 PRIDE:O43300
DNASU:26045 Ensembl:ENST00000274711 GeneID:26045 KEGG:hsa:26045
UCSC:uc011cyz.1 CTD:26045 GeneCards:GC05M138205 HGNC:HGNC:19409
HPA:HPA017323 MIM:610868 neXtProt:NX_O43300 PharmGKB:PA134993038
InParanoid:O43300 OMA:IRQCSMI OrthoDB:EOG4PG60Z GenomeRNAi:26045
NextBio:47883 ArrayExpress:O43300 Bgee:O43300 CleanEx:HS_LRRTM2
Genevestigator:O43300 Uniprot:O43300
Length = 516
Score = 117 (46.2 bits), Expect = 0.00060, P = 0.00060
Identities = 42/128 (32%), Positives = 66/128 (51%)
Query: 34 KETTRMSLMQNAIQNLT--EIPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNR 91
K + +SL N I L + + +L L L N + TV + F + L+ LILS N+
Sbjct: 61 KGSLGLSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNK 120
Query: 92 SLENLPLGIFN-LVSLQHLDISWTGITTLPIELKY-LVNLKCLNLEYTFRLSRIPQQVIS 149
+ LP F L++LQ+LD+S+ +++L EL Y L L+ L+L L IP ++
Sbjct: 121 -IFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSN-SLRTIPVRLFW 178
Query: 150 DLKMLRAL 157
D + L L
Sbjct: 179 DCRSLEFL 186
>UNIPROTKB|Q15399 [details] [associations]
symbol:TLR1 "Toll-like receptor 1" species:9606 "Homo
sapiens" [GO:0002755 "MyD88-dependent toll-like receptor signaling
pathway" evidence=IEA] [GO:0034130 "toll-like receptor 1 signaling
pathway" evidence=IEA] [GO:0050707 "regulation of cytokine
secretion" evidence=IEA] [GO:0006954 "inflammatory response"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0030670 "phagocytic vesicle membrane" evidence=IEA] [GO:0004888
"transmembrane signaling receptor activity" evidence=NAS]
[GO:0016020 "membrane" evidence=NAS] [GO:0042116 "macrophage
activation" evidence=NAS] [GO:0042535 "positive regulation of tumor
necrosis factor biosynthetic process" evidence=ISS] [GO:0045410
"positive regulation of interleukin-6 biosynthetic process"
evidence=ISS] [GO:0004872 "receptor activity" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0005887 "integral
to plasma membrane" evidence=TAS] [GO:0006955 "immune response"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0035354 "Toll-like receptor 1-Toll-like receptor 2 protein
complex" evidence=IDA] [GO:0042495 "detection of triacyl bacterial
lipopeptide" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=IDA] [GO:0071727 "cellular response to triacyl
bacterial lipopeptide" evidence=IDA] InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR017241 InterPro:IPR027190
Pfam:PF01582 PIRSF:PIRSF037595 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0005887 GO:GO:0030670 GO:GO:0006955
GO:GO:0042742 GO:GO:0006954 InterPro:IPR000483 SMART:SM00082
GO:GO:0045087 GO:GO:0046982 GO:GO:0042116 GO:GO:0004888
GO:GO:0002224 GO:GO:0052033 GO:GO:0042535 GO:GO:0071723
GO:GO:0002282 GO:GO:0045410 SUPFAM:SSF52200 eggNOG:NOG272762
HOGENOM:HOG000008676 HOVERGEN:HBG023180 EMBL:U88540 EMBL:DQ012259
EMBL:DQ012261 EMBL:D13637 EMBL:AL050262 EMBL:BC109094
IPI:IPI00090764 PIR:T08664 RefSeq:NP_003254.2 UniGene:Hs.621817
UniGene:Hs.654532 PDB:1FYV PDB:2Z7X PDBsum:1FYV PDBsum:2Z7X
ProteinModelPortal:Q15399 SMR:Q15399 STRING:Q15399
PhosphoSite:Q15399 DMDM:146291086 PRIDE:Q15399
Ensembl:ENST00000308979 Ensembl:ENST00000502213 GeneID:7096
KEGG:hsa:7096 UCSC:uc003gtl.3 CTD:7096 GeneCards:GC04M038797
HGNC:HGNC:11847 MIM:601194 MIM:613223 neXtProt:NX_Q15399
PharmGKB:PA36549 InParanoid:Q15399 KO:K05398 OMA:NNIETTW
PhylomeDB:Q15399 EvolutionaryTrace:Q15399 GenomeRNAi:7096
NextBio:27759 ArrayExpress:Q15399 Bgee:Q15399 CleanEx:HS_TLR1
Genevestigator:Q15399 GermOnline:ENSG00000174125 GO:GO:0035354
GO:GO:0071727 GO:GO:0042495 PANTHER:PTHR24365:SF23 Uniprot:Q15399
Length = 786
Score = 117 (46.2 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 46/162 (28%), Positives = 80/162 (49%)
Query: 1 MTLRIASTINKEKENFLV-LAGVGLTEAPSIGMWKETTRMSLMQNAIQNL--TEIPTCPR 57
+ L+I +++E E FLV + GL P + ++TT +++ QN I L ++I + +
Sbjct: 13 LILQIRIQLSEESE-FLVDRSKNGLIHVPK-DLSQKTTILNISQNYISELWTSDILSLSK 70
Query: 58 LRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGIT 117
LR L + N + + + F L L LS+N+ ++ + V+L+HLD+S+
Sbjct: 71 LRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVK---ISCHPTVNLKHLDLSFNAFD 127
Query: 118 TLPI--ELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRAL 157
LPI E + LK L L T L + I+ L + + L
Sbjct: 128 ALPICKEFGNMSQLKFLGLSTT-HLEKSSVLPIAHLNISKVL 168
Score = 46 (21.3 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 225 HLNNSNSLSV-FAFASLRHLRTLQLYFNDLEELKIDAGELKRIREICG-FHSLQKV 278
HL+ SN+L F + HL L+ + +LK EL +I E+ SLQ++
Sbjct: 352 HLDFSNNLLTDTVFENCGHLTELETLILQMNQLK----ELSKIAEMTTQMKSLQQL 403
>UNIPROTKB|F1S5B4 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR002131 PRINTS:PR00373
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 CTD:59352 KO:K08399 OMA:AYGKAPS
EMBL:CU929522 EMBL:FP565468 RefSeq:XP_003130662.2
Ensembl:ENSSSCT00000011954 GeneID:100511400 KEGG:ssc:100511400
Uniprot:F1S5B4
Length = 967
Score = 120 (47.3 bits), Expect = 0.00064, P = 0.00064
Identities = 40/136 (29%), Positives = 62/136 (45%)
Query: 17 LVLAGVGLTEAPSIGMWKETTRMSLMQ---NAIQNLTEIPTCPRLRTLFLPSNHLGTVSN 73
L L GL P GM ++ R+ +++ N IQ L + C +L + L N + +
Sbjct: 332 LTLTRAGLQRLPP-GMCQQLPRLQVLELSHNQIQGLPSLHRCQKLEKIGLQHNRIWEIGA 390
Query: 74 NFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIE-LKYLVNLKC- 131
+ F + SL+ L LS+N P L +L LD++ +T LP+ L LV+LK
Sbjct: 391 DTFSQLTSLQALDLSWNAIRSIHPEAFATLRALVKLDLTHNQLTMLPLAGLGGLVHLKLK 450
Query: 132 --LNLEYTFRLSRIPQ 145
L L F P+
Sbjct: 451 GNLGLSQAFSKDSFPK 466
>UNIPROTKB|J9NZ68 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF12661 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AAEX03002614 EMBL:AAEX03002615
EMBL:AAEX03002616 Ensembl:ENSCAFT00000044488 Uniprot:J9NZ68
Length = 1337
Score = 127 (49.8 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 47/165 (28%), Positives = 82/165 (49%)
Query: 15 NFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCP--RLRTLFLPSNHLGTVS 72
N + G GLTE P+ + + T + L QN+I+ + P +LR + L +N + ++
Sbjct: 89 NIVDCRGKGLTEIPT-NLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELA 147
Query: 73 NNFFHSMASLRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIE-LKYLVNLK 130
+ F + SL L+L Y + LP +F L SLQ L ++ I L ++ + L NL
Sbjct: 148 PDAFQGLRSLNSLVL-YGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLN 206
Query: 131 CLNLEYTFRLSRIPQQVISDLKMLRALRM----FECGFNVELEAD 171
L+L Y +L I + S L+ ++ + + F C +++ AD
Sbjct: 207 LLSL-YDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLAD 250
Score = 40 (19.1 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 218 TQCLCL-RHLNNSNSLSVFAFASLRHLRTLQLYFNDL 253
TQ L L N + F L+ LR L L+ ND+
Sbjct: 608 TQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDI 644
>UNIPROTKB|E1BX56 [details] [associations]
symbol:LRRTM1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007610 "behavior" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0030426 "growth cone" evidence=IEA]
[GO:0035418 "protein localization to synapse" evidence=IEA]
[GO:0050808 "synapse organization" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005783 GO:GO:0007610 GO:GO:0030424
InterPro:IPR003591 SMART:SM00369 GO:GO:0050808 GO:GO:0030426
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0035418
GeneTree:ENSGT00700000104056 CTD:347730 KO:K16665 OMA:EPDLFHG
EMBL:AADN02014722 IPI:IPI00599810 RefSeq:XP_001233729.1
ProteinModelPortal:E1BX56 Ensembl:ENSGALT00000025729 GeneID:771502
KEGG:gga:771502 NextBio:20921702 Uniprot:E1BX56
Length = 521
Score = 105 (42.0 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 40/155 (25%), Positives = 74/155 (47%)
Query: 17 LVLAGVGLTEAPS--IGMWKETTRMSLMQNAIQNLTE--IPTCPRLRTLFLPSNHLGTVS 72
L + LTE P GM +SL N++ L + +L L+L NH+ +V
Sbjct: 50 LYCESLNLTEMPRNLSGMMG----LSLRYNSLSELHDGQFTGLMQLTWLYLDHNHICSVE 105
Query: 73 NNFFHSMASLRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIELKY-LVNLK 130
N F + ++ L LS N+ + LP F + +L+ +D+S+ + +L +L + L L
Sbjct: 106 GNAFQKLRRVKELTLSSNK-ITQLPNNTFRPMPNLRSVDLSYNNLQSLEPDLFHGLRKLT 164
Query: 131 CLNLEYTFRLSRIPQQVISDLKMLRALRMFECGFN 165
L++ + +P ++ D R+L+ + G+N
Sbjct: 165 TLHMRSN-AIKFVPVRIFQDC---RSLKFLDIGYN 195
Score = 54 (24.1 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 31/118 (26%), Positives = 46/118 (38%)
Query: 216 ISTQCLCLRHL----NNSNSLSVFAFASLRHLRTLQLYFNDLEELKIDAGELKRIREICG 271
I C L+ L N SL+ +FA L L L L NDL +K++ R+ +
Sbjct: 180 IFQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDL--VKVNLAHFPRLISL-- 235
Query: 272 FHSLQKVFYKI-LKIEARDMACTCSQYQACPRGLTKFEEHPLKRLECAELKELPLDCN 328
HSL K+ + + D + + E H + + LK L LD N
Sbjct: 236 -HSLCLRRNKVTIVVNTLDWIWQLEKLDLSGNEIEYIEPHVFESVP--HLKSLQLDSN 290
>TAIR|locus:2047525 [details] [associations]
symbol:AT2G24130 species:3702 "Arabidopsis thaliana"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0006468 "protein phosphorylation"
evidence=IEA;ISS] [GO:0007169 "transmembrane receptor protein
tyrosine kinase signaling pathway" evidence=ISS] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000719
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.60.120.200
InterPro:IPR013320 EMBL:AC005967 HOGENOM:HOG000116551
InterPro:IPR013210 Pfam:PF08263 IPI:IPI00546514 PIR:H84632
RefSeq:NP_179990.1 UniGene:At.52889 ProteinModelPortal:Q9ZUI0
SMR:Q9ZUI0 PRIDE:Q9ZUI0 EnsemblPlants:AT2G24130.1 GeneID:816947
KEGG:ath:AT2G24130 GeneFarm:671 TAIR:At2g24130 InParanoid:Q9ZUI0
OMA:CHEITLL PhylomeDB:Q9ZUI0 ProtClustDB:CLSN2683021
Genevestigator:Q9ZUI0 Uniprot:Q9ZUI0
Length = 980
Score = 119 (46.9 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 47/139 (33%), Positives = 70/139 (50%)
Query: 28 PSIGMWKETTR-MSLMQNAIQ-NLT-EIPTCPRLRTLFLPSNHL-GTVSNNFF--HSMAS 81
P IG ET + +SL +N + N+ E+ RL L L SN L G++ F S +S
Sbjct: 108 PEIGSLHETLKQLSLSENLLHGNIPQELGLLNRLVYLDLGSNRLNGSIPVQLFCNGSSSS 167
Query: 82 LRVLILSYNRSLENLPLGIF-NLVSLQHLDISWTG-IT-TLPIELKYLVNLKCLNLEYTF 138
L+ + LS N +PL +L L+ L + W+ +T T+P L NLK ++LE
Sbjct: 168 LQYIDLSNNSLTGEIPLNYHCHLKELRFL-LLWSNKLTGTVPSSLSNSTNLKWMDLESNM 226
Query: 139 RLSRIPQQVISDLKMLRAL 157
+P QVIS + L+ L
Sbjct: 227 LSGELPSQVISKMPQLQFL 245
Score = 45 (20.9 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 220 CLCLRHLNNS-NSLSVF---AFASLRHLRTLQLYFNDL 253
C+ L HLN S N S + L +L+ L + FN L
Sbjct: 490 CIALEHLNLSRNGFSSTLPSSLGQLPYLKELDVSFNRL 527
>UNIPROTKB|F1NY48 [details] [associations]
symbol:RXFP1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007188 "adenylate cyclase-modulating G-protein coupled
receptor signaling pathway" evidence=IEA] [GO:0007567 "parturition"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0042562 "hormone binding" evidence=IEA] [GO:0060427 "lung
connective tissue development" evidence=IEA] [GO:0060658 "nipple
morphogenesis" evidence=IEA] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002172 InterPro:IPR008112 InterPro:IPR017452
Pfam:PF00001 Pfam:PF00057 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS50068 PROSITE:PS50262 PROSITE:PS51450 SMART:SM00192
GO:GO:0016021 GO:GO:0030154 GO:GO:0004930 InterPro:IPR003591
SMART:SM00369 GO:GO:0030198 GO:GO:0042562 GO:GO:0007188
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR000372 SMART:SM00013 OMA:YTLTTRP
GeneTree:ENSGT00650000093266 EMBL:AADN02016502 IPI:IPI00603372
ProteinModelPortal:F1NY48 Ensembl:ENSGALT00000015353 Uniprot:F1NY48
Length = 755
Score = 118 (46.6 bits), Expect = 0.00078, P = 0.00078
Identities = 41/128 (32%), Positives = 65/128 (50%)
Query: 34 KETTRMSLMQNAIQNLTEIPTC---PRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYN 90
K + +M N++ +L + P C PRL L L NH+ + N F S ++L VL++ N
Sbjct: 219 KSLILLDMMNNSLAHLPDKPLCQYMPRLNWLDLEGNHIHHLRNVTFISCSTLTVLVMRQN 278
Query: 91 RSLENLPLGIFN-LVSLQHLDISWTGITTLPIEL-KYLVNLKCLNLEYT-FRLSRIPQ-Q 146
+ + +L F+ L L LD++ I +LP + K L L LNL Y + +I Q
Sbjct: 279 K-ISSLNENSFSSLQMLDELDLASNEIESLPAYVFKDLKELSQLNLSYNPIKKIQIDQFD 337
Query: 147 VISDLKML 154
++ LK L
Sbjct: 338 FLTKLKSL 345
>FB|FBgn0028888 [details] [associations]
symbol:CG4168 species:7227 "Drosophila melanogaster"
[GO:0004930 "G-protein coupled receptor activity" evidence=ISS]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014134
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
HSSP:Q9BZR6 FlyBase:FBgn0028888 RefSeq:NP_609740.4
ProteinModelPortal:Q9VJQ0 SMR:Q9VJQ0 IntAct:Q9VJQ0 MINT:MINT-294601
GeneID:34889 KEGG:dme:Dmel_CG4168 UCSC:CG4168-RA InParanoid:Q9VJQ0
PhylomeDB:Q9VJQ0 GenomeRNAi:34889 NextBio:790724
ArrayExpress:Q9VJQ0 Bgee:Q9VJQ0 Uniprot:Q9VJQ0
Length = 1443
Score = 121 (47.7 bits), Expect = 0.00079, P = 0.00079
Identities = 55/213 (25%), Positives = 96/213 (45%)
Query: 58 LRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENLPLGIFNLV-SLQHLDISWTGI 116
L+TL L SN L T++ + FH++ LR L LSYNR L N+ G F ++ +L LD+ +
Sbjct: 777 LQTLNLQSNRLRTIARHAFHNLEFLRYLDLSYNR-LVNISHGAFTVLPNLAALDLMHNQL 835
Query: 117 TTLPIELKYLVNLKCLNLEYTFRLSRIPQQVISDLKMLRALRMFECGFNVELEADSILFG 176
+L ++ V+ N RL+ + S L + + +++ + +
Sbjct: 836 CSLSLKSFLYVS----NTTTPLRLNVSHNHIASFYDELSSYMYI---YQLDISHNHVTKS 888
Query: 177 DSXXXXXXXXXXXXXXXXTITLQSFGALQRLLSYCRLGSIS-TQCLCLRHLNNSNSLSVF 235
DS + G+LQ S+ G + + L + H NN SL
Sbjct: 889 DSFTNLANTLRFL-----NLAHNQLGSLQ---SHA-FGDLEFLEILNVAH-NNLTSLRRR 938
Query: 236 AFASLRHLRTLQLYFNDLEELKIDA-GELKRIR 267
+F L L+ L L N L++L+++ L+++R
Sbjct: 939 SFQGLNSLQELDLSHNQLDQLQVEQFSNLRKLR 971
>MGI|MGI:2442313 [details] [associations]
symbol:Lrrc1 "leucine rich repeat containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2442313 GO:GO:0005737 GO:GO:0016020 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
HOGENOM:HOG000116557 CTD:55227 HOVERGEN:HBG052357 OrthoDB:EOG498V0J
EMBL:AK051043 EMBL:AK082721 EMBL:AK147075 EMBL:BC046591
EMBL:BC087542 IPI:IPI00267845 IPI:IPI00453515 IPI:IPI00469577
RefSeq:NP_001139520.1 RefSeq:NP_766116.3 UniGene:Mm.28534
UniGene:Mm.482664 ProteinModelPortal:Q80VQ1 SMR:Q80VQ1
STRING:Q80VQ1 PhosphoSite:Q80VQ1 PaxDb:Q80VQ1 PRIDE:Q80VQ1
GeneID:214345 KEGG:mmu:214345 InParanoid:Q80VQ1 NextBio:374274
CleanEx:MM_LRRC1 Genevestigator:Q80VQ1
GermOnline:ENSMUSG00000032352 Uniprot:Q80VQ1
Length = 524
Score = 116 (45.9 bits), Expect = 0.00079, P = 0.00079
Identities = 46/140 (32%), Positives = 67/140 (47%)
Query: 24 LTEAP-SIGMWKETTRMSLMQNAIQNLTE-IPTCPRLRTLFLPSNHLGTVSNNFFHSMAS 81
LT P S+ + + L N I NL E I L+ L+L N L + ++ +
Sbjct: 163 LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEI-GNLKN 221
Query: 82 LRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYTFRLS 141
L L +S NR LE LP I L SL +L IS + T+P + L L L L+ RL+
Sbjct: 222 LLCLDVSENR-LERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQN-RLT 279
Query: 142 RIPQQVISDLKMLRALRMFE 161
++P+ I D + L L + E
Sbjct: 280 QLPE-AIGDCENLTELVLTE 298
>TAIR|locus:2047595 [details] [associations]
symbol:PIRL6 "AT2G19330" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0042023
"DNA endoreduplication" evidence=RCA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG4886 InterPro:IPR025875
Pfam:PF12799 EMBL:AC003058 HSSP:P17778 EMBL:AY849576
IPI:IPI00544254 PIR:T01281 RefSeq:NP_179523.1 UniGene:At.51204
ProteinModelPortal:O64566 SMR:O64566 PaxDb:O64566 PRIDE:O64566
EnsemblPlants:AT2G19330.1 GeneID:816450 KEGG:ath:AT2G19330
TAIR:At2g19330 HOGENOM:HOG000241007 InParanoid:O64566 OMA:RLNCLRA
PhylomeDB:O64566 ProtClustDB:CLSN2683169 ArrayExpress:O64566
Genevestigator:O64566 Uniprot:O64566
Length = 380
Score = 114 (45.2 bits), Expect = 0.00081, P = 0.00081
Identities = 35/121 (28%), Positives = 63/121 (52%)
Query: 29 SIGMWKETTRMSLMQNAIQNLTE-IPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLIL 87
SIG + +++ N + + + I C L L N L + ++ + +LR L +
Sbjct: 125 SIGCLSKLKTLNVSGNFLVSFPKSIQHCRSLEELNANFNKLIRLPDSIGFELTNLRKLSI 184
Query: 88 SYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYTFR-LSRIPQQ 146
+ N+ L +LP+ I +L SL+ LD + LP +L+ L+NL+ LN+ F+ LS +P
Sbjct: 185 NSNK-LISLPISITHLTSLRVLDARLNCLMILPDDLENLINLEILNVSQNFQYLSALPSS 243
Query: 147 V 147
+
Sbjct: 244 I 244
>TAIR|locus:2120825 [details] [associations]
symbol:PIRL8 "AT4G26050" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG4886 HSSP:P17778 HOGENOM:HOG000241007
ProtClustDB:CLSN2683169 EMBL:AY093142 EMBL:BT008469 IPI:IPI00517392
RefSeq:NP_194335.2 UniGene:At.43405 ProteinModelPortal:Q8RWE5
SMR:Q8RWE5 STRING:Q8RWE5 EnsemblPlants:AT4G26050.1 GeneID:828711
KEGG:ath:AT4G26050 TAIR:At4g26050 InParanoid:Q8RWE5 OMA:ELGACTQ
PhylomeDB:Q8RWE5 Genevestigator:Q8RWE5 Uniprot:Q8RWE5
Length = 383
Score = 114 (45.2 bits), Expect = 0.00082, P = 0.00082
Identities = 43/145 (29%), Positives = 72/145 (49%)
Query: 24 LTEAP-SIGM-WKETTRMSLMQNAIQNL-TEIPTCPRLRTLFLPSNHLGTVSNNFFHSMA 80
LT P +IG T++S+ N + L + LR L N L ++ + ++
Sbjct: 162 LTRLPDAIGFELTNLTKLSVNSNKLVLLPNSVSYLTSLRVLDARLNRLSSLPEDL-ENLV 220
Query: 81 SLRVLILSYN-RSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYTFR 139
+L+VL +S N + L LP + L+SL LD+S+ GIT LP L L ++ L++E
Sbjct: 221 NLQVLNVSQNFQHLTTLPYSVGLLISLVELDVSYNGITVLPDSLGCLRRIQKLSVEGNPL 280
Query: 140 LS---RIPQQVISDLKMLRALRMFE 161
+S + +Q + LK + +M E
Sbjct: 281 ISPPFEVVEQGLEALKQYMSEKMTE 305
>RGD|1560339 [details] [associations]
symbol:Lgr6 "leucine-rich repeat-containing G protein-coupled
receptor 6" species:10116 "Rattus norvegicus" [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016500 "protein-hormone receptor
activity" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS51450 RGD:1560339 GO:GO:0016021
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 GeneTree:ENSGT00650000092962 CTD:59352
KO:K08399 OrthoDB:EOG4SQWW8 OMA:AYGKAPS IPI:IPI00213568
RefSeq:XP_001062538.1 RefSeq:XP_573455.1 ProteinModelPortal:D3ZJU9
Ensembl:ENSRNOT00000006969 GeneID:498233 KEGG:rno:498233
UCSC:RGD:1560339 NextBio:699115 Uniprot:D3ZJU9
Length = 965
Score = 119 (46.9 bits), Expect = 0.00082, P = 0.00082
Identities = 41/150 (27%), Positives = 70/150 (46%)
Query: 17 LVLAGVGLTEAPSIGMWKETTRMSLMQ---NAIQNLTEIPTCPRLRTLFLPSNHLGTVSN 73
L L G+ P+ GM ++ R+ +++ N I+ L + C +L + L N + +
Sbjct: 333 LTLTRAGIRLLPA-GMCQQLPRLRILELSHNQIEELPSLHRCQKLEEIGLQHNRIWEIGA 391
Query: 74 NFFHSMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLN 133
+ F ++SL+ L LS+N P L SL LD++ +TTLP L L L L
Sbjct: 392 DTFSQLSSLQALDLSWNAIRAIHPEAFSTLRSLVKLDLTDNQLTTLP--LAGLGGLMHLK 449
Query: 134 LEYTFRLSR-IPQQVISDLKMLRALRMFEC 162
L+ LS+ + L++L ++C
Sbjct: 450 LKGNLALSQAFSKDSFPKLRILEVPYAYQC 479
>WB|WBGene00022129 [details] [associations]
symbol:lron-11 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104286 HSSP:P07359 EMBL:FO081276
EMBL:AF304125 RefSeq:NP_491035.1 UniGene:Cel.7069
ProteinModelPortal:G5EGE7 SMR:G5EGE7 EnsemblMetazoa:Y71F9B.8
GeneID:171837 KEGG:cel:CELE_Y71F9B.8 CTD:171837 WormBase:Y71F9B.8
OMA:AFVDNIN NextBio:872913 Uniprot:G5EGE7
Length = 542
Score = 116 (45.9 bits), Expect = 0.00083, P = 0.00083
Identities = 42/136 (30%), Positives = 69/136 (50%)
Query: 27 APSIGMWKETTRMSLMQNAIQNLTE--IPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRV 84
A + ++ ++ L N+I +L+ T P LR L L SN L ++ N F + +L+
Sbjct: 63 ADELSLYPNLEQLILHNNSITHLSADVFSTLPSLRVLDLSSNSLLSLPNEVFSKLKNLKT 122
Query: 85 LILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIE-LKYLVNLKCLNLEYTFRLSRI 143
LI+S N ++ P L LQ L I+ ++ LP LK L L+ L+L LS +
Sbjct: 123 LIISSN-DVQLGPECFAGLSQLQTLSIADNRLSFLPPSVLKPLSGLRNLDLSANKLLS-M 180
Query: 144 PQQVISDLKMLRALRM 159
P V+++L L L++
Sbjct: 181 PASVMNNLGGLETLKL 196
>WB|WBGene00011971 [details] [associations]
symbol:lron-9 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040017 "positive regulation of
locomotion" evidence=IMP] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0018996
InterPro:IPR003591 SMART:SM00369 GO:GO:0040011 GO:GO:0040017
GeneTree:ENSGT00700000104286 EMBL:Z81130 UniGene:Cel.6867
GeneID:172529 KEGG:cel:CELE_T23G11.6 UCSC:T23G11.6c CTD:172529
NextBio:875913 PIR:T25194 RefSeq:NP_001076615.1
ProteinModelPortal:O02329 SMR:O02329 EnsemblMetazoa:T23G11.6a
WormBase:T23G11.6a HOGENOM:HOG000015968 InParanoid:O02329
OMA:CNLQTIP ArrayExpress:O02329 Uniprot:O02329
Length = 653
Score = 117 (46.2 bits), Expect = 0.00083, P = 0.00083
Identities = 45/158 (28%), Positives = 78/158 (49%)
Query: 23 GLTEAPSIGMWKETTRMSLMQNA---IQNLT--EIPTCPRLRTLFLPSNHLGTVSNNFFH 77
G+ + P ++KE ++ +++ + I L + T +L+ L L N + ++ F
Sbjct: 243 GIFQPPET-LFKEIPQIEVLKLSGCSIPTLEPGQFATLKKLKELDLRVNLIENITAYAFD 301
Query: 78 SMASLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIEL-KYLVN-LKCLNLE 135
+ SL L L+ N + P F L SL+ LD+ W I T+P ++ K L + LK ++L
Sbjct: 302 GLESLTRLSLAGNFISKLEPDVFFGLSSLEELDLGWNEIKTIPTDVFKPLTDKLKTISLR 361
Query: 136 YTFRLSRIPQQVISDLKMLRALRMFECGFNVELEADSI 173
+S +P + L ML L + ECGF + AD +
Sbjct: 362 NN-PISELPS---TGLGMLEKLSLAECGFT-SISADQL 394
>FB|FBgn0034083 [details] [associations]
symbol:lbk "lambik" species:7227 "Drosophila melanogaster"
[GO:0048477 "oogenesis" evidence=IMP] [GO:0008407 "chaeta
morphogenesis" evidence=IMP] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 EMBL:AE013599 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 RefSeq:NP_611091.2
ProteinModelPortal:A1ZAB1 SMR:A1ZAB1 STRING:A1ZAB1 PaxDb:A1ZAB1
EnsemblMetazoa:FBtr0302084 GeneID:36788 KEGG:dme:Dmel_CG8434
UCSC:CG8434-RA CTD:36788 FlyBase:FBgn0034083 eggNOG:NOG329771
InParanoid:A1ZAB1 OMA:LEINWST OrthoDB:EOG4T4B98 GenomeRNAi:36788
NextBio:800384 Bgee:A1ZAB1 Uniprot:A1ZAB1
Length = 1252
Score = 120 (47.3 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 64/233 (27%), Positives = 104/233 (44%)
Query: 37 TRMSLMQNAIQNLTEIPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLILSYNRSLENL 96
T++SL +N ++ + + L+ L L +NH+ ++S+ ++ LR L LS N+ L +
Sbjct: 318 TKVSLKRNLLEVIPKFIGLSGLKHLVLANNHITSISSESLAALPLLRTLDLSRNK-LHTI 376
Query: 97 PLGIF-NLVSLQHLDISWTGITTL-PIELKYLVNLKCLNLEYTFRLSRIPQQVISDLKML 154
L F +L HL +S+ IT + L NL L L RLS +P +V +L L
Sbjct: 377 ELNSFPKSNNLVHLILSFNEITNVNEHSFATLNNLTDLELSNN-RLSTLPIRVFKNLNQL 435
Query: 155 RALRMFECGFNVELEADSILF-GDSXXXXXXXXXXXXXXXXTITLQSFGALQRL-LSYCR 212
+ L + FN +LE + F G ++ + L+ +
Sbjct: 436 KKLAL---NFN-QLEINWSTFRGLESMKNLQLKSNKIRALQDGVFYVMHKIETIDLAMNQ 491
Query: 213 LGSISTQCLC----LRHLNNS-NSLS---VFAFASLRHLRTLQLYFNDLEELK 257
+ S+S Q L LRHLN S N++S V + + L L L N + E K
Sbjct: 492 ISSLSRQGLFNLTKLRHLNLSFNAISRIEVDTWEFTQSLEVLDLSNNAINEFK 544
Score = 46 (21.3 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 237 FASLRHLRTLQLYFNDLEELKIDA 260
F LR LR L L+ N+L+++ A
Sbjct: 601 FKGLRKLRRLDLHGNNLKQISTKA 624
>UNIPROTKB|F1P8A1 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF12661 Pfam:PF01463
GeneTree:ENSGT00700000104083 CTD:9353 KO:K06839 OMA:RHKMFKG
EMBL:AAEX03002614 EMBL:AAEX03002615 EMBL:AAEX03002616
RefSeq:XP_854843.1 ProteinModelPortal:F1P8A1
Ensembl:ENSCAFT00000026343 GeneID:595148 KEGG:cfa:595148
Uniprot:F1P8A1
Length = 1530
Score = 127 (49.8 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 47/165 (28%), Positives = 82/165 (49%)
Query: 15 NFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCP--RLRTLFLPSNHLGTVS 72
N + G GLTE P+ + + T + L QN+I+ + P +LR + L +N + ++
Sbjct: 282 NIVDCRGKGLTEIPT-NLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELA 340
Query: 73 NNFFHSMASLRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIE-LKYLVNLK 130
+ F + SL L+L Y + LP +F L SLQ L ++ I L ++ + L NL
Sbjct: 341 PDAFQGLRSLNSLVL-YGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLN 399
Query: 131 CLNLEYTFRLSRIPQQVISDLKMLRALRM----FECGFNVELEAD 171
L+L Y +L I + S L+ ++ + + F C +++ AD
Sbjct: 400 LLSL-YDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLAD 443
Score = 40 (19.1 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 218 TQCLCL-RHLNNSNSLSVFAFASLRHLRTLQLYFNDL 253
TQ L L N + F L+ LR L L+ ND+
Sbjct: 801 TQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDI 837
>UNIPROTKB|F1MLJ7 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090288 "negative regulation of cellular response to
growth factor stimulus" evidence=IEA] [GO:0090260 "negative
regulation of retinal ganglion cell axon guidance" evidence=IEA]
[GO:0090024 "negative regulation of neutrophil chemotaxis"
evidence=IEA] [GO:0071676 "negative regulation of mononuclear cell
migration" evidence=IEA] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=IEA] [GO:0071504 "cellular
response to heparin" evidence=IEA] [GO:0070100 "negative regulation
of chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0050929 "induction of negative
chemotaxis" evidence=IEA] [GO:0048846 "axon extension involved in
axon guidance" evidence=IEA] [GO:0048754 "branching morphogenesis
of an epithelial tube" evidence=IEA] [GO:0048495 "Roundabout
binding" evidence=IEA] [GO:0045499 "chemorepellent activity"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0043237 "laminin-1 binding" evidence=IEA] [GO:0043116 "negative
regulation of vascular permeability" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0032870 "cellular response to hormone stimulus" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0021972 "corticospinal neuron axon guidance
through spinal cord" evidence=IEA] [GO:0021836 "chemorepulsion
involved in postnatal olfactory bulb interneuron migration"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005095 "GTPase inhibitor activity" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0001933 "negative regulation of protein
phosphorylation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005737 GO:GO:0008285 GO:GO:0005615 GO:GO:0009986
GO:GO:0030308 GO:GO:0001701 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001656 GO:GO:0010596 GO:GO:0001657
GO:GO:0001933 GO:GO:0048754 GO:GO:0071676 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
GO:GO:0048846 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0010593 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0090260 GO:GO:0021836 GO:GO:0061364 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 OMA:RHKMFKG
EMBL:DAAA02017049 IPI:IPI00692425 Ensembl:ENSBTAT00000061059
NextBio:20876291 Uniprot:F1MLJ7
Length = 1532
Score = 127 (49.8 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 47/165 (28%), Positives = 82/165 (49%)
Query: 15 NFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCP--RLRTLFLPSNHLGTVS 72
N + G GLTE P+ + + T + L QN+I+ + P +LR + L +N + ++
Sbjct: 284 NIVDCRGKGLTEIPT-NLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELA 342
Query: 73 NNFFHSMASLRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIE-LKYLVNLK 130
+ F + SL L+L Y + LP +F L SLQ L ++ I L ++ + L NL
Sbjct: 343 PDAFQGLRSLNSLVL-YGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLN 401
Query: 131 CLNLEYTFRLSRIPQQVISDLKMLRALRM----FECGFNVELEAD 171
L+L Y +L I + S L+ ++ + + F C +++ AD
Sbjct: 402 LLSL-YDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLAD 445
Score = 40 (19.1 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 218 TQCLCL-RHLNNSNSLSVFAFASLRHLRTLQLYFNDL 253
TQ L L N + F L+ LR L L+ ND+
Sbjct: 803 TQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDI 839
>DICTYBASE|DDB_G0278445 [details] [associations]
symbol:mpl3 "putative protein tyrosine phosphatase,
dual specificity" species:44689 "Dictyostelium discoideum"
[GO:0035335 "peptidyl-tyrosine dephosphorylation" evidence=IEA]
[GO:0016791 "phosphatase activity" evidence=IEA] [GO:0016311
"dephosphorylation" evidence=IEA] [GO:0008138 "protein
tyrosine/serine/threonine phosphatase activity" evidence=IEA;IBA]
[GO:0006470 "protein dephosphorylation" evidence=IEA;IBA]
[GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA]
[GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001611
InterPro:IPR000340 InterPro:IPR000387 InterPro:IPR016130
InterPro:IPR020422 InterPro:IPR024950 Pfam:PF00782 PROSITE:PS00383
PROSITE:PS50054 PROSITE:PS50056 PROSITE:PS51450 SMART:SM00195
dictyBase:DDB_G0278445 GenomeReviews:CM000152_GR EMBL:AAFI02000023
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0004725
GO:GO:0035335 GO:GO:0008138 PANTHER:PTHR10159 HSSP:Q05923
RefSeq:XP_642370.1 ProteinModelPortal:Q54Y32
EnsemblProtists:DDB0238874 GeneID:8621575 KEGG:ddi:DDB_G0278445
OMA:DSANNAP Uniprot:Q54Y32
Length = 856
Score = 118 (46.6 bits), Expect = 0.00092, P = 0.00092
Identities = 34/119 (28%), Positives = 63/119 (52%)
Query: 28 PSIGMWKETTRMSLMQNAIQNL-TEI-PTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVL 85
P + + K T ++L +N + L T + P L +L L N + ++ ++ + +L+ L
Sbjct: 385 PDLQLVKSLTTVNLTRNKLSKLQTSVFIELPSLTSLILDRNFISSIPDDI-DQIKNLKYL 443
Query: 86 ILSYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYTFRLSRIP 144
+ +N +LE LP + NL L LD+S + TLP L+NL+ + L Y +++ +P
Sbjct: 444 SIKHN-ALEYLPNSLSNLSQLISLDLSQNKLKTLPPNFDDLINLRMVWLSYN-QITSLP 500
>TAIR|locus:2074728 [details] [associations]
symbol:PIRL9 "plant intracellular ras group-related LRR
9" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0009555 "pollen development" evidence=IGI]
[GO:0055046 "microgametogenesis" evidence=IGI] [GO:0016132
"brassinosteroid biosynthetic process" evidence=RCA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 EMBL:CP002686
GenomeReviews:BA000014_GR eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0055046 InterPro:IPR025875 Pfam:PF12799
EMBL:AY072078 EMBL:AY122958 EMBL:AY849579 IPI:IPI00535260
RefSeq:NP_187741.2 UniGene:At.39776 ProteinModelPortal:Q8VYG9
SMR:Q8VYG9 PaxDb:Q8VYG9 PRIDE:Q8VYG9 EnsemblPlants:AT3G11330.1
GeneID:820306 KEGG:ath:AT3G11330 TAIR:At3g11330
HOGENOM:HOG000239210 InParanoid:Q8VYG9 OMA:HASANPV PhylomeDB:Q8VYG9
ProtClustDB:CLSN2686671 ArrayExpress:Q8VYG9 Genevestigator:Q8VYG9
Uniprot:Q8VYG9
Length = 499
Score = 115 (45.5 bits), Expect = 0.00096, P = 0.00096
Identities = 34/118 (28%), Positives = 57/118 (48%)
Query: 29 SIGMWKETTRMSLMQNAIQNLTE-IPTCPRLRTLFLPSNHLGTVSNNFFHSMASLRVLIL 87
SIG+ + +++ N + +L + I C L L + N L + N + +L L++
Sbjct: 262 SIGLLSKLKILNVSTNKLTSLPDSICRCGSLVILDVSFNRLTYLPTNIGPELVNLEKLLV 321
Query: 88 SYNRSLENLPLGIFNLVSLQHLDISWTGITTLPIELKYLVNLKCLNLEYTFR-LSRIP 144
YN+ + + P I + SL+HLD + + LP L NL+ LNL F L +P
Sbjct: 322 QYNK-IRSFPTSIGEMRSLKHLDAHFNELNGLPDSFVLLTNLEYLNLSSNFSDLKDLP 378
>UNIPROTKB|O75094 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=NAS] [GO:0005739
"mitochondrion" evidence=NAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IDA] [GO:0050919 "negative chemotaxis"
evidence=IDA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEP] [GO:0032870 "cellular response to hormone
stimulus" evidence=IEP] [GO:0051414 "response to cortisol stimulus"
evidence=IEP] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0021834 "chemorepulsion involved in embryonic olfactory bulb
interneuron precursor migration" evidence=IDA] [GO:0007411 "axon
guidance" evidence=IDA;TAS] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IMP] [GO:0030308
"negative regulation of cell growth" evidence=IMP] [GO:0035385
"Roundabout signaling pathway" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005739
Reactome:REACT_111045 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T EMBL:AB017169 EMBL:AB011538 EMBL:AY358884
EMBL:AC008409 EMBL:AC008479 EMBL:AC011365 EMBL:AC011389
EMBL:AC027311 EMBL:AC094081 EMBL:AC112165 EMBL:BC146759
EMBL:AL122074 EMBL:AF075240 IPI:IPI00409709 IPI:IPI00409710
IPI:IPI00983148 PIR:T34555 RefSeq:NP_003053.1 UniGene:Hs.604116
ProteinModelPortal:O75094 SMR:O75094 IntAct:O75094
MINT:MINT-2797284 STRING:O75094 PhosphoSite:O75094 PaxDb:O75094
PRIDE:O75094 Ensembl:ENST00000404867 Ensembl:ENST00000519560
GeneID:6586 KEGG:hsa:6586 UCSC:uc003mab.3 CTD:6586
GeneCards:GC05M168021 H-InvDB:HIX0005394 HGNC:HGNC:11087
HPA:HPA051630 MIM:603745 neXtProt:NX_O75094 PharmGKB:PA35940
InParanoid:O75094 KO:K06850 PhylomeDB:O75094 ChiTaRS:SLIT3
GenomeRNAi:6586 NextBio:25629 Bgee:O75094 CleanEx:HS_SLIT3
Genevestigator:O75094 GermOnline:ENSG00000184347 Uniprot:O75094
Length = 1523
Score = 107 (42.7 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 42/165 (25%), Positives = 80/165 (48%)
Query: 15 NFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTE--IPTCPRLRTLFLPSNHLGTVS 72
N + G GL E P+ + + + L QN+I+ + +L+ + + N + ++
Sbjct: 289 NIVDCRGKGLMEIPA-NLPEGIVEIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIA 347
Query: 73 NNFFHSMASLRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIE-LKYLVNLK 130
+ F + SL L+L Y + + G+F+ LVSLQ L ++ I L + + L NL
Sbjct: 348 PDAFQGLKSLTSLVL-YGNKITEIVKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLN 406
Query: 131 CLNLEYTFRLSRIPQQVISDLKMLRALRM----FECGFNVELEAD 171
L+L Y +L I + + + L+ ++ L + F C +++ AD
Sbjct: 407 LLSL-YDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLAD 450
Score = 61 (26.5 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 19/63 (30%), Positives = 35/63 (55%)
Query: 213 LGSISTQCLCLRHLN----NSNSLSV---FAFASLRHLRTLQLYFNDLEELKIDA-GELK 264
L ++ + LRHL ++NS+S+ + F+++ HL TL L +N L + + A L+
Sbjct: 764 LTAVPRELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNGLR 823
Query: 265 RIR 267
+R
Sbjct: 824 SLR 826
>UNIPROTKB|J3KNP3 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 EMBL:AC008409
EMBL:AC008479 EMBL:AC011365 EMBL:AC011389 EMBL:AC027311
EMBL:AC094081 EMBL:AC112165 HGNC:HGNC:11087 ChiTaRS:SLIT3
OMA:SVDCHGL ProteinModelPortal:J3KNP3 Ensembl:ENST00000332966
Uniprot:J3KNP3
Length = 1530
Score = 107 (42.7 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 42/165 (25%), Positives = 80/165 (48%)
Query: 15 NFLVLAGVGLTEAPSIGMWKETTRMSLMQNAIQNLTE--IPTCPRLRTLFLPSNHLGTVS 72
N + G GL E P+ + + + L QN+I+ + +L+ + + N + ++
Sbjct: 289 NIVDCRGKGLMEIPA-NLPEGIVEIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIA 347
Query: 73 NNFFHSMASLRVLILSYNRSLENLPLGIFN-LVSLQHLDISWTGITTLPIE-LKYLVNLK 130
+ F + SL L+L Y + + G+F+ LVSLQ L ++ I L + + L NL
Sbjct: 348 PDAFQGLKSLTSLVL-YGNKITEIVKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLN 406
Query: 131 CLNLEYTFRLSRIPQQVISDLKMLRALRM----FECGFNVELEAD 171
L+L Y +L I + + + L+ ++ L + F C +++ AD
Sbjct: 407 LLSL-YDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLAD 450
Score = 61 (26.5 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 19/63 (30%), Positives = 35/63 (55%)
Query: 213 LGSISTQCLCLRHLN----NSNSLSV---FAFASLRHLRTLQLYFNDLEELKIDA-GELK 264
L ++ + LRHL ++NS+S+ + F+++ HL TL L +N L + + A L+
Sbjct: 764 LTAVPRELSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNGLR 823
Query: 265 RIR 267
+R
Sbjct: 824 SLR 826
>UNIPROTKB|Q40640 [details] [associations]
symbol:Xa21 "Receptor kinase-like protein" species:4530
"Oryza sativa" [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000719
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
GO:GO:0005886 GO:GO:0005524 GO:GO:0009507 GO:GO:0016045
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.60.120.200
InterPro:IPR013320 GO:GO:0009626 InterPro:IPR025875 Pfam:PF12799
HSSP:P25147 InterPro:IPR013210 Pfam:PF08263 GO:GO:0010204
GO:GO:0002764 GO:GO:0010359 EMBL:U37133 PIR:A57676
ProteinModelPortal:Q40640 DIP:DIP-46054N Gramene:Q40640
Genevestigator:Q40640 Uniprot:Q40640
Length = 1025
Score = 125 (49.1 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 44/144 (30%), Positives = 74/144 (51%)
Query: 17 LVLAGVG-LTEAPSIGMWKETTRMSLMQNAIQNLTEIPTCPRLRTLFLPSNHLGTVSNNF 75
++ +G G L + +W+ + + Q+ ++++ C +L+TL L N+LG V N
Sbjct: 312 IITSGFGRLRNLTELYLWRNLFQ-TREQDDWGFISDLTNCSKLQTLNLGENNLGGVLPNS 370
Query: 76 FHSMA-SLRVLILSYNRSLENLPLGIFNLVSLQHLDISWTGIT-TLPIELKYLVNLKCLN 133
F +++ SL L L N+ ++P I NL+ LQHL + +LP L L NL L
Sbjct: 371 FSNLSTSLSFLALELNKITGSIPKDIGNLIGLQHLYLCNNNFRGSLPSSLGRLKNLGIL- 429
Query: 134 LEYTFRLS-RIPQQV--ISDLKML 154
L Y LS IP + +++L +L
Sbjct: 430 LAYENNLSGSIPLAIGNLTELNIL 453
Score = 38 (18.4 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 213 LGSISTQCLCLRHLNNSNSLSVFAFAS 239
L S + +C LR++ + N + + S
Sbjct: 746 LKSFTAECEALRNMRHRNLVKIVTICS 772
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.138 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 366 350 0.0010 116 3 11 22 0.47 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 174
No. of states in DFA: 616 (65 KB)
Total size of DFA: 241 KB (2130 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.48u 0.11s 28.59t Elapsed: 00:00:02
Total cpu time: 28.51u 0.11s 28.62t Elapsed: 00:00:02
Start: Sat May 11 12:01:48 2013 End: Sat May 11 12:01:50 2013
WARNINGS ISSUED: 1