Query 038553
Match_columns 161
No_of_seqs 108 out of 1129
Neff 9.7
Searched_HMMs 46136
Date Fri Mar 29 12:14:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038553.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038553hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK09481 sspA stringent starva 100.0 2.3E-31 5.1E-36 191.0 13.0 157 2-159 40-203 (211)
2 KOG0406 Glutathione S-transfer 100.0 2.1E-29 4.6E-34 179.1 13.5 160 1-160 38-213 (231)
3 PRK10542 glutathionine S-trans 100.0 1.2E-28 2.6E-33 175.5 10.4 152 7-159 38-198 (201)
4 PLN02395 glutathione S-transfe 100.0 3.7E-28 8.1E-33 174.7 12.5 153 6-159 38-211 (215)
5 PRK15113 glutathione S-transfe 100.0 7.9E-28 1.7E-32 173.1 11.8 151 8-160 46-210 (214)
6 PLN02473 glutathione S-transfe 100.0 9.3E-28 2E-32 172.5 11.9 151 7-158 40-211 (214)
7 COG0625 Gst Glutathione S-tran 99.9 4.4E-27 9.6E-32 168.8 12.0 151 2-153 30-199 (211)
8 PRK13972 GSH-dependent disulfi 99.9 4.8E-27 1E-31 169.1 10.9 149 8-159 39-206 (215)
9 PRK10357 putative glutathione 99.9 1.4E-26 3E-31 165.1 12.9 155 2-158 30-200 (202)
10 TIGR01262 maiA maleylacetoacet 99.9 1.8E-26 3.9E-31 165.3 13.3 152 7-159 38-205 (210)
11 PRK11752 putative S-transferas 99.9 7.7E-26 1.7E-30 167.3 13.0 151 7-160 87-260 (264)
12 PLN02378 glutathione S-transfe 99.9 1.6E-25 3.5E-30 160.9 13.1 147 2-159 41-200 (213)
13 TIGR00862 O-ClC intracellular 99.9 4.1E-25 8.8E-30 160.2 12.8 151 1-160 39-222 (236)
14 KOG0868 Glutathione S-transfer 99.9 3.3E-25 7.1E-30 149.8 11.2 152 7-159 44-208 (217)
15 PLN02817 glutathione dehydroge 99.9 1.7E-24 3.7E-29 159.8 12.9 147 2-159 94-252 (265)
16 PTZ00057 glutathione s-transfe 99.9 5.4E-24 1.2E-28 152.2 10.6 142 14-160 52-201 (205)
17 KOG0867 Glutathione S-transfer 99.9 2E-23 4.3E-28 151.1 11.9 152 4-156 37-207 (226)
18 PRK10387 glutaredoxin 2; Provi 99.9 2.6E-21 5.6E-26 138.6 9.7 135 13-152 40-207 (210)
19 KOG1695 Glutathione S-transfer 99.8 1.7E-20 3.8E-25 132.6 10.8 146 11-160 42-202 (206)
20 TIGR02182 GRXB Glutaredoxin, G 99.8 1.2E-19 2.7E-24 130.1 9.5 137 11-152 37-206 (209)
21 KOG4420 Uncharacterized conser 99.8 2.4E-18 5.1E-23 123.0 9.7 153 5-158 62-287 (325)
22 PLN02907 glutamate-tRNA ligase 99.8 3.8E-18 8.3E-23 140.2 10.6 119 15-151 32-159 (722)
23 KOG1422 Intracellular Cl- chan 99.7 2.7E-17 6E-22 114.3 11.4 149 3-159 43-206 (221)
24 cd03185 GST_C_Tau GST_C family 99.6 1.2E-14 2.5E-19 96.1 8.8 103 57-159 2-116 (126)
25 cd03186 GST_C_SspA GST_N famil 99.6 1E-14 2.2E-19 93.8 7.8 100 57-156 2-107 (107)
26 cd03196 GST_C_5 GST_C family, 99.5 4.3E-14 9.2E-19 92.2 8.2 102 55-156 3-115 (115)
27 cd03190 GST_C_ECM4_like GST_C 99.5 1.1E-13 2.3E-18 93.6 8.6 101 58-158 4-118 (142)
28 cd03184 GST_C_Omega GST_C fami 99.5 1.6E-13 3.4E-18 90.6 7.3 101 58-160 2-115 (124)
29 cd03188 GST_C_Beta GST_C famil 99.5 1.3E-13 2.8E-18 89.3 6.4 99 58-156 2-114 (114)
30 COG0435 ECM4 Predicted glutath 99.5 3E-14 6.5E-19 103.0 3.3 135 21-157 129-285 (324)
31 cd03209 GST_C_Mu GST_C family, 99.5 4E-13 8.6E-18 88.3 7.9 103 58-160 2-111 (121)
32 cd03177 GST_C_Delta_Epsilon GS 99.4 5.8E-13 1.3E-17 87.1 8.2 100 58-157 2-111 (118)
33 cd03187 GST_C_Phi GST_C family 99.4 4.1E-13 8.9E-18 87.5 7.3 99 58-156 2-118 (118)
34 cd03191 GST_C_Zeta GST_C famil 99.4 4.6E-13 1E-17 87.8 6.6 103 57-159 2-120 (121)
35 cd03061 GST_N_CLIC GST_N famil 99.4 3E-13 6.5E-18 84.0 4.9 48 1-49 42-89 (91)
36 cd03210 GST_C_Pi GST_C family, 99.4 8.3E-13 1.8E-17 87.4 7.1 103 58-160 3-114 (126)
37 cd03178 GST_C_Ure2p_like GST_C 99.4 6.8E-13 1.5E-17 85.9 5.9 99 58-156 1-112 (113)
38 cd03181 GST_C_EFB1gamma GST_C 99.4 2.1E-12 4.5E-17 84.9 7.9 102 59-160 2-118 (123)
39 cd03189 GST_C_GTT1_like GST_C 99.4 2E-12 4.3E-17 84.5 7.7 98 53-150 2-119 (119)
40 cd03208 GST_C_Alpha GST_C fami 99.4 3.1E-12 6.8E-17 85.9 8.0 103 58-160 3-117 (137)
41 cd03195 GST_C_4 GST_C family, 99.4 2.8E-12 6.1E-17 83.5 7.5 101 57-158 2-113 (114)
42 cd03207 GST_C_8 GST_C family, 99.4 8.9E-13 1.9E-17 84.1 4.5 94 65-158 4-102 (103)
43 cd03198 GST_C_CLIC GST_C famil 99.3 7.5E-12 1.6E-16 83.3 7.6 89 71-159 9-125 (134)
44 cd03182 GST_C_GTT2_like GST_C 99.3 6.7E-12 1.4E-16 81.7 7.1 98 55-152 1-117 (117)
45 cd03203 GST_C_Lambda GST_C fam 99.3 1E-11 2.3E-16 81.5 7.7 97 55-159 1-112 (120)
46 cd03201 GST_C_DHAR GST_C famil 99.3 4.3E-12 9.3E-17 83.4 5.5 71 89-159 29-111 (121)
47 KOG3027 Mitochondrial outer me 99.3 8.2E-11 1.8E-15 82.0 11.6 115 15-132 62-219 (257)
48 cd03180 GST_C_2 GST_C family, 99.3 9.6E-12 2.1E-16 79.9 6.7 95 58-152 2-110 (110)
49 KOG2903 Predicted glutathione 99.3 1.4E-12 3.1E-17 93.6 2.7 134 21-156 123-286 (319)
50 PF13417 GST_N_3: Glutathione 99.3 4.7E-12 1E-16 76.3 4.5 47 2-49 28-74 (75)
51 cd03200 GST_C_JTV1 GST_C famil 99.3 1.8E-11 3.9E-16 77.3 6.6 76 39-131 1-76 (96)
52 cd03183 GST_C_Theta GST_C fami 99.2 1.4E-11 3E-16 81.4 5.5 99 59-157 2-121 (126)
53 cd03059 GST_N_SspA GST_N famil 99.2 2E-11 4.3E-16 73.0 4.4 44 2-46 30-73 (73)
54 cd03052 GST_N_GDAP1 GST_N fami 99.2 1.4E-11 3E-16 73.9 3.4 37 6-43 37-73 (73)
55 cd03206 GST_C_7 GST_C family, 99.2 3E-11 6.5E-16 76.7 3.8 66 87-152 30-100 (100)
56 cd03046 GST_N_GTT1_like GST_N 99.2 4.8E-11 1E-15 71.8 4.2 41 6-47 36-76 (76)
57 cd03057 GST_N_Beta GST_N famil 99.1 6.8E-11 1.5E-15 71.5 4.4 40 7-47 37-77 (77)
58 cd03058 GST_N_Tau GST_N family 99.1 6.9E-11 1.5E-15 70.9 4.2 44 2-46 30-74 (74)
59 cd03048 GST_N_Ure2p_like GST_N 99.1 7.1E-11 1.5E-15 72.1 4.0 40 7-47 38-80 (81)
60 cd03194 GST_C_3 GST_C family, 99.1 3.8E-10 8.2E-15 73.4 7.5 70 87-157 38-113 (114)
61 PF13410 GST_C_2: Glutathione 99.1 2.1E-10 4.6E-15 67.8 5.7 65 87-156 3-67 (69)
62 PF13409 GST_N_2: Glutathione 99.1 1.5E-10 3.3E-15 68.8 4.7 41 4-45 29-70 (70)
63 KOG4244 Failed axon connection 99.1 1.5E-09 3.2E-14 78.5 10.5 121 10-133 83-246 (281)
64 cd03050 GST_N_Theta GST_N fami 99.1 2.1E-10 4.5E-15 69.2 4.7 39 7-46 38-76 (76)
65 cd03076 GST_N_Pi GST_N family, 99.1 6.7E-11 1.5E-15 70.9 2.4 42 3-45 32-73 (73)
66 PF00043 GST_C: Glutathione S- 99.1 1.6E-10 3.4E-15 72.4 4.2 65 86-150 24-95 (95)
67 cd03044 GST_N_EF1Bgamma GST_N 99.1 2E-10 4.2E-15 69.2 3.8 41 3-44 31-74 (75)
68 cd03053 GST_N_Phi GST_N family 99.0 2.5E-10 5.4E-15 68.7 4.0 38 7-45 39-76 (76)
69 cd03204 GST_C_GDAP1 GST_C fami 99.0 3.7E-10 8E-15 72.9 4.7 67 86-152 25-111 (111)
70 PF14834 GST_C_4: Glutathione 99.0 2.6E-09 5.6E-14 68.1 8.3 100 55-157 1-113 (117)
71 cd03060 GST_N_Omega_like GST_N 99.0 2.6E-10 5.7E-15 67.9 3.6 40 2-42 30-70 (71)
72 cd03045 GST_N_Delta_Epsilon GS 99.0 4.2E-10 9E-15 67.4 4.0 37 7-44 38-74 (74)
73 cd00299 GST_C_family Glutathio 99.0 7.8E-10 1.7E-14 69.4 5.5 73 63-135 2-81 (100)
74 KOG3029 Glutathione S-transfer 99.0 5.8E-09 1.3E-13 76.1 10.3 131 1-134 119-333 (370)
75 cd03179 GST_C_1 GST_C family, 99.0 1.3E-09 2.8E-14 69.4 5.6 76 58-133 2-86 (105)
76 cd03047 GST_N_2 GST_N family, 99.0 6E-10 1.3E-14 66.6 3.8 36 7-43 38-73 (73)
77 cd03049 GST_N_3 GST_N family, 99.0 4.8E-10 1E-14 67.0 3.1 41 2-43 32-73 (73)
78 cd03075 GST_N_Mu GST_N family, 99.0 6.7E-10 1.5E-14 68.0 3.6 29 17-46 54-82 (82)
79 PF02798 GST_N: Glutathione S- 99.0 9.1E-10 2E-14 66.4 4.1 38 7-44 38-76 (76)
80 PF14497 GST_C_3: Glutathione 98.9 7.4E-10 1.6E-14 70.1 3.1 75 57-133 4-80 (99)
81 cd03042 GST_N_Zeta GST_N famil 98.9 1.1E-09 2.3E-14 65.3 3.4 37 6-43 37-73 (73)
82 cd03193 GST_C_Metaxin GST_C fa 98.9 7.9E-09 1.7E-13 63.9 7.2 67 90-157 19-85 (88)
83 cd03056 GST_N_4 GST_N family, 98.9 1.5E-09 3.2E-14 64.7 3.8 36 7-43 38-73 (73)
84 cd03043 GST_N_1 GST_N family, 98.9 2.1E-09 4.5E-14 64.3 4.2 35 8-43 39-73 (73)
85 cd03041 GST_N_2GST_N GST_N fam 98.9 1.4E-09 3.1E-14 65.7 3.5 38 8-46 38-77 (77)
86 cd03192 GST_C_Sigma_like GST_C 98.9 6.8E-09 1.5E-13 66.1 6.7 77 58-134 2-85 (104)
87 cd03039 GST_N_Sigma_like GST_N 98.8 1.9E-09 4E-14 64.3 2.2 34 10-44 39-72 (72)
88 cd03038 GST_N_etherase_LigE GS 98.8 4.3E-09 9.4E-14 64.6 3.8 36 10-47 48-84 (84)
89 cd03080 GST_N_Metaxin_like GST 98.8 4.5E-09 9.7E-14 63.2 3.7 35 12-47 41-75 (75)
90 cd03055 GST_N_Omega GST_N fami 98.8 3.5E-09 7.6E-14 65.8 3.3 41 2-43 48-89 (89)
91 cd03077 GST_N_Alpha GST_N fami 98.8 7.5E-09 1.6E-13 62.9 4.1 30 17-47 48-77 (79)
92 COG2999 GrxB Glutaredoxin 2 [P 98.8 6.8E-08 1.5E-12 66.1 8.6 110 20-133 46-184 (215)
93 KOG3028 Translocase of outer m 98.7 3E-07 6.4E-12 68.3 11.7 116 15-131 44-204 (313)
94 cd03202 GST_C_etherase_LigE GS 98.7 2.8E-08 6.1E-13 65.5 5.8 49 86-134 54-102 (124)
95 cd03211 GST_C_Metaxin2 GST_C f 98.7 3.9E-08 8.4E-13 65.1 6.2 72 85-157 52-123 (126)
96 cd03051 GST_N_GTT2_like GST_N 98.7 1.5E-08 3.2E-13 60.4 3.4 36 7-43 38-74 (74)
97 cd03040 GST_N_mPGES2 GST_N fam 98.5 5.8E-08 1.3E-12 58.5 2.7 34 13-47 40-77 (77)
98 cd03079 GST_N_Metaxin2 GST_N f 98.5 9.2E-08 2E-12 57.1 3.4 30 15-45 45-74 (74)
99 cd03037 GST_N_GRX2 GST_N famil 98.5 1.5E-07 3.3E-12 55.8 3.5 34 10-44 37-71 (71)
100 cd03212 GST_C_Metaxin1_3 GST_C 98.5 4.3E-07 9.4E-12 60.9 5.6 47 86-132 60-106 (137)
101 cd03205 GST_C_6 GST_C family, 98.4 1.2E-06 2.7E-11 55.1 6.1 46 85-133 32-77 (98)
102 cd00570 GST_N_family Glutathio 98.4 3.7E-07 7.9E-12 53.1 3.4 32 11-43 40-71 (71)
103 cd03054 GST_N_Metaxin GST_N fa 98.4 4.9E-07 1.1E-11 53.7 3.5 30 15-45 43-72 (72)
104 cd03197 GST_C_mPGES2 GST_C fam 98.3 4.8E-06 1E-10 56.2 8.1 46 89-134 78-124 (149)
105 cd03078 GST_N_Metaxin1_like GS 97.8 2.5E-05 5.5E-10 46.6 3.6 31 14-45 42-72 (73)
106 KOG1147 Glutamyl-tRNA syntheta 97.0 0.00067 1.5E-08 54.4 3.4 89 23-130 39-128 (712)
107 PF04399 Glutaredoxin2_C: Glut 96.8 0.013 2.9E-07 38.9 7.6 46 88-134 57-102 (132)
108 PF10568 Tom37: Outer mitochon 96.4 0.0045 9.8E-08 36.7 3.0 27 15-42 44-71 (72)
109 TIGR02190 GlrX-dom Glutaredoxi 95.8 0.0091 2E-07 35.9 2.6 34 9-43 46-79 (79)
110 cd03199 GST_C_GRX2 GST_C famil 95.0 0.17 3.8E-06 33.4 6.7 46 88-134 58-103 (128)
111 PF11801 Tom37_C: Tom37 C-term 94.1 0.14 3E-06 35.5 5.0 38 95-132 113-154 (168)
112 cd03029 GRX_hybridPRX5 Glutare 93.9 0.079 1.7E-06 31.0 3.0 32 11-43 41-72 (72)
113 PRK10638 glutaredoxin 3; Provi 92.9 0.13 2.7E-06 31.1 2.9 36 8-44 40-75 (83)
114 TIGR02196 GlrX_YruB Glutaredox 90.6 0.41 8.8E-06 27.4 3.2 32 10-42 40-73 (74)
115 PF11287 DUF3088: Protein of u 89.7 0.45 9.8E-06 30.5 3.0 28 20-47 67-108 (112)
116 cd02066 GRX_family Glutaredoxi 89.4 0.58 1.3E-05 26.5 3.2 32 9-41 39-70 (72)
117 PF09635 MetRS-N: MetRS-N bind 88.1 0.45 9.7E-06 31.1 2.2 33 14-47 29-63 (122)
118 cd02976 NrdH NrdH-redoxin (Nrd 86.5 0.71 1.5E-05 26.3 2.3 25 9-34 39-63 (73)
119 TIGR02183 GRXA Glutaredoxin, G 80.0 3 6.6E-05 25.2 3.3 28 20-47 56-83 (86)
120 PRK11200 grxA glutaredoxin 1; 77.3 4.7 0.0001 24.1 3.6 28 20-47 57-84 (85)
121 cd03027 GRX_DEP Glutaredoxin ( 73.7 5.7 0.00012 22.9 3.2 30 9-39 40-69 (73)
122 TIGR02200 GlrX_actino Glutared 66.6 3.6 7.7E-05 23.7 1.2 24 10-34 40-65 (77)
123 cd03419 GRX_GRXh_1_2_like Glut 66.3 9.7 0.00021 22.2 3.1 32 12-44 45-76 (82)
124 cd03418 GRX_GRXb_1_3_like Glut 66.0 12 0.00026 21.4 3.5 31 12-43 42-73 (75)
125 TIGR02181 GRX_bact Glutaredoxi 65.7 13 0.00027 21.7 3.6 34 10-44 39-72 (79)
126 PF11417 Inhibitor_G39P: Loade 65.2 26 0.00056 20.6 5.7 37 33-71 4-42 (71)
127 TIGR02180 GRX_euk Glutaredoxin 61.5 17 0.00036 21.2 3.6 32 12-44 46-77 (84)
128 PRK10329 glutaredoxin-like pro 54.8 9.5 0.00021 22.8 1.6 18 14-32 44-61 (81)
129 TIGR02681 phage_pRha phage reg 47.1 22 0.00047 22.7 2.5 26 22-47 2-28 (108)
130 PRK15371 effector protein YopJ 45.6 57 0.0012 24.8 4.8 51 90-142 23-73 (287)
131 COG0695 GrxC Glutaredoxin and 43.5 25 0.00054 20.9 2.2 24 11-35 43-67 (80)
132 cd03028 GRX_PICOT_like Glutare 41.3 57 0.0012 19.7 3.7 30 12-42 55-84 (90)
133 PF03421 YopJ: YopJ Serine/Thr 39.6 85 0.0018 22.0 4.7 48 93-142 2-49 (177)
134 PHA03050 glutaredoxin; Provisi 36.8 61 0.0013 20.5 3.4 30 10-40 59-88 (108)
135 PF00462 Glutaredoxin: Glutare 34.8 37 0.00079 18.5 1.9 23 9-32 38-60 (60)
136 KOG1668 Elongation factor 1 be 32.6 28 0.00061 25.5 1.4 33 96-128 10-42 (231)
137 KOG1752 Glutaredoxin and relat 31.6 1E+02 0.0022 19.6 3.7 41 2-43 45-89 (104)
138 TIGR02189 GlrX-like_plant Glut 30.6 1.1E+02 0.0024 18.9 3.8 30 12-42 53-82 (99)
139 cd05142 Barstar Barstar is an 30.0 1.3E+02 0.0029 18.2 4.6 31 25-55 2-32 (87)
140 PF09314 DUF1972: Domain of un 28.6 45 0.00098 23.6 1.9 18 30-47 156-173 (185)
141 PF08986 DUF1889: Domain of un 28.6 1.4E+02 0.0031 18.7 3.8 42 30-73 43-86 (119)
142 TIGR01764 excise DNA binding d 27.5 93 0.002 15.6 3.0 24 20-43 25-48 (49)
143 TIGR00365 monothiol glutaredox 27.2 1.3E+02 0.0028 18.5 3.7 30 12-42 59-88 (97)
144 PF00392 GntR: Bacterial regul 26.0 81 0.0018 17.5 2.4 31 96-126 3-34 (64)
145 PF12290 DUF3802: Protein of u 26.0 48 0.001 21.4 1.5 85 36-126 9-97 (113)
146 TIGR03396 PC_PLC phospholipase 25.3 93 0.002 26.9 3.4 28 20-47 390-425 (690)
147 COG3646 Uncharacterized phage- 25.2 2E+02 0.0044 20.0 4.5 29 86-114 87-115 (167)
148 PF09849 DUF2076: Uncharacteri 23.1 3.2E+02 0.007 20.3 7.0 66 35-106 6-71 (247)
149 TIGR02194 GlrX_NrdH Glutaredox 23.0 52 0.0011 18.7 1.2 14 15-29 43-56 (72)
150 PF09098 Dehyd-heme_bind: Quin 22.8 62 0.0013 22.4 1.6 14 34-47 55-68 (167)
151 PF12728 HTH_17: Helix-turn-he 21.2 1.4E+02 0.0031 15.5 3.2 26 20-45 25-50 (51)
152 PHA02776 E7 protein; Provision 20.7 39 0.00085 21.4 0.3 13 112-124 1-13 (101)
No 1
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=99.97 E-value=2.3e-31 Score=191.01 Aligned_cols=157 Identities=24% Similarity=0.399 Sum_probs=130.6
Q ss_pred CCCCCCCChhhhhhCCCCCccceEEeCCeecccHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHhhhhhhhhhhhh
Q 038553 2 ENLFGGKSDLLLKSNPIYKKVPVLLHDGKPLCESTVIVNYIDETWPSPPLLPSCASERAKARFWADFIDKKVIDAVCNIW 81 (161)
Q Consensus 2 e~~~~~~~~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (161)
.+++++++++|+++||. |+||+|++||.+|+||.+|++||+++||+..++|.++.++++++.|+.+....+......+.
T Consensus 40 ~v~~~~~~~~~~~~nP~-g~VPvL~~~g~~l~ES~AIl~YL~~~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~ 118 (211)
T PRK09481 40 QVEKDNLPQDLIDLNPY-QSVPTLVDRELTLYESRIIMEYLDERFPHPPLMPVYPVARGESRLMMHRIEKDWYSLMNKIV 118 (211)
T ss_pred eCCcccCCHHHHHhCCC-CCCCEEEECCEEeeCHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56778889999999999 99999999999999999999999999998889999999999999999887665554443333
Q ss_pred hcCCCchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhh------hhCCCCc-hhhhhchhhhhh
Q 038553 82 KSKGKVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWFYAVE------KFGGFKV-ENECMQRETVAR 154 (161)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~~~~~------~~~~~~~-~~~~~~rp~~~~ 154 (161)
...+...+...+.+...++.+|+.|++++|++|+++|+||+++++++.++...+ .+|++.. .++|.+||++++
T Consensus 119 ~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~rp~~~~ 198 (211)
T PRK09481 119 NGSASEADAARKQLREELLAIAPVFGEKPYFMSEEFSLVDCYLAPLLWRLPVLGIELSGPGAKELKGYMTRVFERDSFLA 198 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHhccCCcccCCCccHHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHHHHhccHHHHH
Confidence 223344566778899999999999998999999999999999999998765432 2455555 699999999999
Q ss_pred hCCCC
Q 038553 155 ILPDP 159 (161)
Q Consensus 155 ~~~~~ 159 (161)
++...
T Consensus 199 ~~~~~ 203 (211)
T PRK09481 199 SLTEA 203 (211)
T ss_pred HcCHH
Confidence 98754
No 2
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=2.1e-29 Score=179.07 Aligned_cols=160 Identities=48% Similarity=0.758 Sum_probs=138.8
Q ss_pred CCCCCCCCChhhhhhCCCCCccceEEeCCeecccHHHHHHHHHhhCC-CCCCCCCCHHHHHHHHHHHHHHhhhhhhhhhh
Q 038553 1 AENLFGGKSDLLLKSNPIYKKVPVLLHDGKPLCESTVIVNYIDETWP-SPPLLPSCASERAKARFWADFIDKKVIDAVCN 79 (161)
Q Consensus 1 ~e~~~~~~~~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~~~~~-~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (161)
+|+|+.+|++||+.+||-++|||+|+++|..|+||..|++||++.++ +++++|.||.+|++++.|.++++..+......
T Consensus 38 veedl~~Ks~~ll~~np~hkKVPvL~Hn~k~i~ESliiveYiDe~w~~~~~iLP~DPy~Ra~arfwa~~id~~~~~~~~~ 117 (231)
T KOG0406|consen 38 VEEDLTNKSEWLLEKNPVHKKVPVLEHNGKPICESLIIVEYIDETWPSGPPILPSDPYERAQARFWAEYIDKKVFFVGRF 117 (231)
T ss_pred EecCCCCCCHHHHHhccccccCCEEEECCceehhhHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 58999999999999996679999999999999999999999999999 79999999999999999999999988777777
Q ss_pred hhhc-CCCchhhhHHHHHHHHHHHHHHhC-CCCcccCCCCChhHHhHHHHHHHHHH-hh-----------hhCCCCc-hh
Q 038553 80 IWKS-KGKVPGTAKNEFIEILKQLVGALG-EKDFFGGDSFGFVDVIAIPLTCWFYA-VE-----------KFGGFKV-EN 144 (161)
Q Consensus 80 ~~~~-~~~~~~~~~~~~~~~l~~le~~L~-~~~~l~G~~~t~aD~~~~~~l~~~~~-~~-----------~~~~~~~-~~ 144 (161)
++.. ..+..+...+.+...|..||+.|+ +++|++|++++++|+++++.+.+... .. .+|.+.. .+
T Consensus 118 ~~~~~~~e~~~~~~~e~~e~l~~lE~el~k~k~~fgG~~~G~vDi~~~p~~~~~~~~~~~~~~~~~~~~~~~P~L~~W~~ 197 (231)
T KOG0406|consen 118 VVAAKGGEEQEAAKEELREALKVLEEELGKGKDFFGGETIGFVDIAIGPSFERWLAVLEKFGGVKFIIEEETPKLIKWIK 197 (231)
T ss_pred HHhhcCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCHhhhhHHhhHHHHHHHHHHhcCcccCCCCCCccHHHHHH
Confidence 7663 457788889999999999999998 79999999999999999976654433 22 2344443 59
Q ss_pred hhhchhhhhhhCCCCC
Q 038553 145 ECMQRETVARILPDPE 160 (161)
Q Consensus 145 ~~~~rp~~~~~~~~~~ 160 (161)
+|.++|++++++++.+
T Consensus 198 ~~~~~~~V~~~~p~~e 213 (231)
T KOG0406|consen 198 RMKEDEAVKAVLPDSE 213 (231)
T ss_pred HHhcChhHHhhcCCHH
Confidence 9999999999998753
No 3
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.96 E-value=1.2e-28 Score=175.49 Aligned_cols=152 Identities=24% Similarity=0.420 Sum_probs=123.8
Q ss_pred CCChhhhhhCCCCCccceEE-eCCeecccHHHHHHHHHhhCCCCCCC-CCCHHHHHHHHHHHHHHhhhhhhhhhhhhhcC
Q 038553 7 GKSDLLLKSNPIYKKVPVLL-HDGKPLCESTVIVNYIDETWPSPPLL-PSCASERAKARFWADFIDKKVIDAVCNIWKSK 84 (161)
Q Consensus 7 ~~~~~~~~~np~~~~vP~L~-~~~~~l~eS~~I~~yl~~~~~~~~l~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (161)
.++++|+++||. |+||+|+ +||.+|+||.+|++||+++++++.++ |.++.++++++.|+.+..+.+...+..++...
T Consensus 38 ~~~~~~~~~nP~-g~vPvL~~~~g~~l~eS~aI~~YL~~~~~~~~l~~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~ 116 (201)
T PRK10542 38 ENGDDYLAINPK-GQVPALLLDDGTLLTEGVAIMQYLADSVPDRQLLAPVGSLSRYHTIEWLNYIATELHKGFTPLFRPD 116 (201)
T ss_pred cCChHHHHhCcC-CCCCeEEeCCCcEeecHHHHHHHHHHhCcccccCCCCCcHHHHHHHHHHHHHHhhhhhhhhhccCCC
Confidence 356899999999 9999998 68899999999999999999876666 56778999999999998877776655554332
Q ss_pred --CCchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHh----hhhCCCCc-hhhhhchhhhhhhCC
Q 038553 85 --GKVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWFYAV----EKFGGFKV-ENECMQRETVARILP 157 (161)
Q Consensus 85 --~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~~~~----~~~~~~~~-~~~~~~rp~~~~~~~ 157 (161)
+.........+.+.++.||+.|++++|++|+++|+||+++++++.+.... ..+|++.. .++|.+||++++++.
T Consensus 117 ~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~k~~~~ 196 (201)
T PRK10542 117 TPEEYKPTVRAQLEKKFQYVDEALADEQWICGQRFTIADAYLFTVLRWAYAVKLNLEGLEHIAAYMQRVAERPAVAAALK 196 (201)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCCCcHHhHHHHHHHHHhhccCCCcccchHHHHHHHHHHcCHHHHHHHH
Confidence 22234456778999999999999899999999999999999999887543 23555554 699999999999986
Q ss_pred CC
Q 038553 158 DP 159 (161)
Q Consensus 158 ~~ 159 (161)
++
T Consensus 197 ~~ 198 (201)
T PRK10542 197 AE 198 (201)
T ss_pred Hc
Confidence 54
No 4
>PLN02395 glutathione S-transferase
Probab=99.96 E-value=3.7e-28 Score=174.66 Aligned_cols=153 Identities=21% Similarity=0.351 Sum_probs=122.7
Q ss_pred CCCChhhhhhCCCCCccceEEeCCeecccHHHHHHHHHhhCCC--CCCCCCCHHHHHHHHHHHHHHhhhhhhhhhhh---
Q 038553 6 GGKSDLLLKSNPIYKKVPVLLHDGKPLCESTVIVNYIDETWPS--PPLLPSCASERAKARFWADFIDKKVIDAVCNI--- 80 (161)
Q Consensus 6 ~~~~~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~~~~~~--~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 80 (161)
++++++|+++||. |+||+|+++|.+|+||.+|++||++++++ +.++|.++.++++++.|+.+....+.+.+...
T Consensus 38 ~~~~~~~~~~nP~-g~vP~L~~~~~~l~ES~aI~~YL~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (215)
T PLN02395 38 EHKQPEYLALQPF-GVVPVIVDGDYKIFESRAIMRYYAEKYRSQGPDLLGKTIEERGQVEQWLDVEATSYHPPLLNLTLH 116 (215)
T ss_pred CcCCHHHHhhCCC-CCCCEEEECCEEEEcHHHHHHHHHHHcCCCCcCcCCCChhHHHHHHHHHHHHHHhcCchHHHHHHH
Confidence 3678999999999 99999999999999999999999999974 36999999999999999998876665443221
Q ss_pred --hhc----C--CCchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHH-------hhhhCCCCc-hh
Q 038553 81 --WKS----K--GKVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWFYA-------VEKFGGFKV-EN 144 (161)
Q Consensus 81 --~~~----~--~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~~~-------~~~~~~~~~-~~ 144 (161)
+.. . +...+...+.+.+.++.||.+|++++|++|+++|+||+++++++.++.. ...+|++.. .+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~ 196 (215)
T PLN02395 117 ILFASKMGFPADEKVIKESEEKLAKVLDVYEARLSKSKYLAGDFVSLADLAHLPFTEYLVGPIGKAYLIKDRKHVSAWWD 196 (215)
T ss_pred HHhhhhccCCCcHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCcCHHHHHHHHHHHHHhcccchhhhhccCchHHHHHH
Confidence 111 1 1223456677889999999999888999999999999999998876531 234566665 69
Q ss_pred hhhchhhhhhhCCCC
Q 038553 145 ECMQRETVARILPDP 159 (161)
Q Consensus 145 ~~~~rp~~~~~~~~~ 159 (161)
++.+||++++++...
T Consensus 197 ~~~~rp~~k~~~~~~ 211 (215)
T PLN02395 197 DISSRPAWKEVLAKY 211 (215)
T ss_pred HHHcChHHHHHHHHh
Confidence 999999999987653
No 5
>PRK15113 glutathione S-transferase; Provisional
Probab=99.95 E-value=7.9e-28 Score=173.06 Aligned_cols=151 Identities=18% Similarity=0.221 Sum_probs=120.8
Q ss_pred CChhhhhhCCCCCccceEEeCCeecccHHHHHHHHHhhCCCCC---CCCCCHHHHHHHHHHHHHHhhhhhhhhh-----h
Q 038553 8 KSDLLLKSNPIYKKVPVLLHDGKPLCESTVIVNYIDETWPSPP---LLPSCASERAKARFWADFIDKKVIDAVC-----N 79 (161)
Q Consensus 8 ~~~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~~~~~~~~---l~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 79 (161)
+.++|+++||. |+||+|++||.+|+||.+|++||+++++++. ++|.++.+++++++|+.|....+..... .
T Consensus 46 ~~~~~~~~nP~-g~VP~L~~~~~~l~ES~aI~~YL~~~~~~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~ 124 (214)
T PRK15113 46 LQPTYQGYSLT-RRVPTLQHDDFELSESSAIAEYLEERFAPPAWERIYPADLQARARARQIQAWLRSDLMPLREERPTDV 124 (214)
T ss_pred cCHHHHhcCCC-CCCCEEEECCEEEecHHHHHHHHHHHcCCCCccccCCCCHHHHHHHHHHHHHHHhhhHHHhccCccch
Confidence 66999999999 9999999999999999999999999998665 9999999999999999999766654321 1
Q ss_pred hhhc--CCCchhhhHHHHHHHHHHHHHHhCC-CCcccCCCCChhHHhHHHHHHHHHHhhh-h-CCCCc-hhhhhchhhhh
Q 038553 80 IWKS--KGKVPGTAKNEFIEILKQLVGALGE-KDFFGGDSFGFVDVIAIPLTCWFYAVEK-F-GGFKV-ENECMQRETVA 153 (161)
Q Consensus 80 ~~~~--~~~~~~~~~~~~~~~l~~le~~L~~-~~~l~G~~~t~aD~~~~~~l~~~~~~~~-~-~~~~~-~~~~~~rp~~~ 153 (161)
++.. .....+...+.+.+.++.+|++|++ +.|++|+ +|+||+++++++.++...+. . |.+.. .++|.+||+++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~l~G~-~TlADi~l~~~l~~~~~~~~~~~p~l~~~~~r~~~rp~~~ 203 (214)
T PRK15113 125 VFAGAKKAPLSEAGKAAAEKLFAVAERLLAPGQPNLFGE-WCIADTDLALMLNRLVLHGDEVPERLADYATFQWQRASVQ 203 (214)
T ss_pred hccCCCCCcccHHHHHHHHHHHHHHHHHHhcCCCEeeCC-ccHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCHHHH
Confidence 1111 1233466778899999999999974 5799996 99999999999987764321 1 33333 59999999999
Q ss_pred hhCCCCC
Q 038553 154 RILPDPE 160 (161)
Q Consensus 154 ~~~~~~~ 160 (161)
+++++.+
T Consensus 204 ~~~~~~~ 210 (214)
T PRK15113 204 RWLALSA 210 (214)
T ss_pred HHHHHhh
Confidence 9987654
No 6
>PLN02473 glutathione S-transferase
Probab=99.95 E-value=9.3e-28 Score=172.53 Aligned_cols=151 Identities=20% Similarity=0.295 Sum_probs=121.9
Q ss_pred CCChhhhhhCCCCCccceEEeCCeecccHHHHHHHHHhhCCC--CCCCCCCHHHHHHHHHHHHHHhhhhhhhhh-----h
Q 038553 7 GKSDLLLKSNPIYKKVPVLLHDGKPLCESTVIVNYIDETWPS--PPLLPSCASERAKARFWADFIDKKVIDAVC-----N 79 (161)
Q Consensus 7 ~~~~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~~~~~~--~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 79 (161)
+++++|+++||. |+||+|++||.+|+||.+|++||++++++ ..++|.++.+++++++|+.+..+.+..... .
T Consensus 40 ~~~~~~~~~nP~-g~vP~L~~~g~~l~ES~aI~~YL~~~~~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~ 118 (214)
T PLN02473 40 QKKPEHLLRQPF-GQVPAIEDGDLKLFESRAIARYYATKYADQGTDLLGKTLEHRAIVDQWVEVENNYFYAVALPLVINL 118 (214)
T ss_pred cCCHHHHhhCCC-CCCCeEEECCEEEEehHHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHH
Confidence 688999999999 99999999999999999999999999974 368999989999999999988876654322 1
Q ss_pred hhhc---C---CCchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHH-------hhhhCCCCc-hhh
Q 038553 80 IWKS---K---GKVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWFYA-------VEKFGGFKV-ENE 145 (161)
Q Consensus 80 ~~~~---~---~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~~~-------~~~~~~~~~-~~~ 145 (161)
.+.. . ....+.....+.+.++.||++|++++|++|+++|+||+++++.+.+... ...+|++.. +++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~ 198 (214)
T PLN02473 119 VFKPRLGEPCDVALVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLTHMPGMRYIMNETSLSGLVTSRENLNRWWNE 198 (214)
T ss_pred HhcccccCCCChHHHHHHHHHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHHHhccccHHHHhcCHHHHHHHHH
Confidence 1211 1 1123445677888999999999888999999999999999998876532 245666666 799
Q ss_pred hhchhhhhhhCCC
Q 038553 146 CMQRETVARILPD 158 (161)
Q Consensus 146 ~~~rp~~~~~~~~ 158 (161)
|.+||++++++..
T Consensus 199 ~~~~p~~~~~~~~ 211 (214)
T PLN02473 199 ISARPAWKKLMEL 211 (214)
T ss_pred HhcChhhHHHHHH
Confidence 9999999998653
No 7
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=4.4e-27 Score=168.76 Aligned_cols=151 Identities=25% Similarity=0.409 Sum_probs=125.1
Q ss_pred CCCCC--CCChhhhhhCCCCCccceEEeCCe-ecccHHHHHHHHHhhCCCCCCCCCCHH---HHHHHHHHHHHHhhhhhh
Q 038553 2 ENLFG--GKSDLLLKSNPIYKKVPVLLHDGK-PLCESTVIVNYIDETWPSPPLLPSCAS---ERAKARFWADFIDKKVID 75 (161)
Q Consensus 2 e~~~~--~~~~~~~~~np~~~~vP~L~~~~~-~l~eS~~I~~yl~~~~~~~~l~p~~~~---~~~~~~~~~~~~~~~~~~ 75 (161)
.|++. .++++|+++||. |+||+|++++. +|+||.+|++||+++||++.++|.++. +++....|+.+....+.+
T Consensus 30 ~v~~~~~~~~~~~~~~nP~-gkVPvL~~~~~~~l~ES~AI~~YL~~~~~~~~l~p~~~~~r~~r~~~~~~~~~~~~~~~~ 108 (211)
T COG0625 30 LVDLDAEQKPPDFLALNPL-GKVPALVDDDGEVLTESGAILEYLAERYPGPPLLPADPLARRARALLLWWLFFAASDLHP 108 (211)
T ss_pred EeCcccccCCHHHHhcCCC-CCCCEEeeCCCCeeecHHHHHHHHHhhCCCCCcCCCCchhHHHHHHHHHHHHHHHhcccH
Confidence 35555 689999999999 99999997665 899999999999999997669998874 788888999999887877
Q ss_pred hhhhhhhcC--------CCchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhh----hhCCCCc-
Q 038553 76 AVCNIWKSK--------GKVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWFYAVE----KFGGFKV- 142 (161)
Q Consensus 76 ~~~~~~~~~--------~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~~~~~----~~~~~~~- 142 (161)
.+....... ....+.....+.+.++.+|..|++++|++|+++|+||+++++.+.++...+ .+|.+..
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~tiAD~~~~~~~~~~~~~~~~~~~~p~l~~w 188 (211)
T COG0625 109 VIGQRRRALLGSEPELLEAALEAARAEIRALLALLEALLADGPYLAGDRFTIADIALAPLLWRLALLGEELADYPALKAW 188 (211)
T ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHhhhcCcccccChHHHHH
Confidence 766554331 334566778899999999999999999999999999999999999876544 3666666
Q ss_pred hhhhhchhhhh
Q 038553 143 ENECMQRETVA 153 (161)
Q Consensus 143 ~~~~~~rp~~~ 153 (161)
.+|+.+||+++
T Consensus 189 ~~r~~~rp~~~ 199 (211)
T COG0625 189 YERVLARPAFR 199 (211)
T ss_pred HHHHHcCCchh
Confidence 69999999953
No 8
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=99.94 E-value=4.8e-27 Score=169.07 Aligned_cols=149 Identities=17% Similarity=0.226 Sum_probs=116.7
Q ss_pred CChhhhhhCCCCCccceEEe-----CC--eecccHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHhhhhhhhhhhh
Q 038553 8 KSDLLLKSNPIYKKVPVLLH-----DG--KPLCESTVIVNYIDETWPSPPLLPSCASERAKARFWADFIDKKVIDAVCNI 80 (161)
Q Consensus 8 ~~~~~~~~np~~~~vP~L~~-----~~--~~l~eS~~I~~yl~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (161)
++++|+++||. |+||+|++ || .+|+||.+|++||+++++ .+.|.++.++++++.|+.|..+.+...+...
T Consensus 39 ~~~~~~~iNP~-gkVP~L~~~~~~d~g~~~~L~ES~AI~~YL~~~~~--~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~ 115 (215)
T PRK13972 39 FRPEFLRISPN-NKIPAIVDHSPADGGEPLSLFESGAILLYLAEKTG--LFLSHETRERAATLQWLFWQVGGLGPMLGQN 115 (215)
T ss_pred CCHHHHhhCcC-CCCCEEEeCCCCCCCCceeEEcHHHHHHHHHHhcC--CCCCCCHHHHHHHHHHHHHHhhccCcceeee
Confidence 47899999999 99999996 45 479999999999999986 4678888899999999999887776654221
Q ss_pred --hhc--C---CCchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHH-HHH---hhhhCCCCc-hhhhhc
Q 038553 81 --WKS--K---GKVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCW-FYA---VEKFGGFKV-ENECMQ 148 (161)
Q Consensus 81 --~~~--~---~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~-~~~---~~~~~~~~~-~~~~~~ 148 (161)
+.. . +...+.....+.+.+..||++|++++|++|+++|+||+++++++.. ... ...+|++.. .++|.+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~~~~~~~~~P~l~~w~~r~~~ 195 (215)
T PRK13972 116 HHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQRIDLAMYPAVKNWHERIRS 195 (215)
T ss_pred eeeeccCCCCCchHHHHHHHHHHHHHHHHHHHhccCccccCCCCCHHHHHHHHHHHHHhhcCCcchhCHHHHHHHHHHHh
Confidence 111 1 1223445667889999999999888999999999999999887743 321 234666665 699999
Q ss_pred hhhhhhhCCCC
Q 038553 149 RETVARILPDP 159 (161)
Q Consensus 149 rp~~~~~~~~~ 159 (161)
||++++++...
T Consensus 196 rp~~~~~~~~~ 206 (215)
T PRK13972 196 RPATGQALLKA 206 (215)
T ss_pred CHHHHHHHHHh
Confidence 99999887643
No 9
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.94 E-value=1.4e-26 Score=165.08 Aligned_cols=155 Identities=19% Similarity=0.228 Sum_probs=123.5
Q ss_pred CCCCCCCChhhhhhCCCCCccceEE-eCCeecccHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHhhhhhhhhhhh
Q 038553 2 ENLFGGKSDLLLKSNPIYKKVPVLL-HDGKPLCESTVIVNYIDETWPSPPLLPSCASERAKARFWADFIDKKVIDAVCNI 80 (161)
Q Consensus 2 e~~~~~~~~~~~~~np~~~~vP~L~-~~~~~l~eS~~I~~yl~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (161)
++++..+++++.++||. |+||+|+ ++|.+++||.+|++||+++++++.++|.++.+++++++|..+..+.+.......
T Consensus 30 ~~~~~~~~~~~~~~nP~-g~vP~L~~~~g~~l~eS~aI~~yL~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~ 108 (202)
T PRK10357 30 NELPYNADNGVAQYNPL-GKVPALVTEEGECWFDSPIIAEYIELLNVAPAMLPRDPLAALRVRQLEALADGIMDAALVSV 108 (202)
T ss_pred ecCCCCCchhhhhcCCc-cCCCeEEeCCCCeeecHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666778899999999 9999998 788999999999999999998778999999899999999888776655443222
Q ss_pred hh---cC----CCchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHh-------hhhCCCCc-hhh
Q 038553 81 WK---SK----GKVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWFYAV-------EKFGGFKV-ENE 145 (161)
Q Consensus 81 ~~---~~----~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~~~~-------~~~~~~~~-~~~ 145 (161)
.. .. ....+.....+.+.|+.||++|++++ ++|+++|+||+++++++.++... ..+|++.. .++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~-l~Gd~~t~ADi~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~ 187 (202)
T PRK10357 109 REQARPAAQQSEDELLRQREKINRSLDALEGYLVDGT-LKTDTVNLATIAIACAVGYLNFRRVAPGWCVDRPHLVKLVEN 187 (202)
T ss_pred HHHhCccccccHHHHHHHHHHHHHHHHHHHHhhccCc-ccCCCcCHHHHHHHHHHHHHHhcccCcchhhcChHHHHHHHH
Confidence 11 11 11234566789999999999998777 99999999999999999876541 23455554 699
Q ss_pred hhchhhhhhhCCC
Q 038553 146 CMQRETVARILPD 158 (161)
Q Consensus 146 ~~~rp~~~~~~~~ 158 (161)
+.+||+++++.+.
T Consensus 188 i~~rp~~~~~~~~ 200 (202)
T PRK10357 188 LFQRESFARTEPP 200 (202)
T ss_pred HhcChhhhhcCCC
Confidence 9999999999875
No 10
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.94 E-value=1.8e-26 Score=165.33 Aligned_cols=152 Identities=24% Similarity=0.297 Sum_probs=121.5
Q ss_pred CCChhhhhhCCCCCccceEEeCCeecccHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHhhhhhhhh----hhhhh
Q 038553 7 GKSDLLLKSNPIYKKVPVLLHDGKPLCESTVIVNYIDETWPSPPLLPSCASERAKARFWADFIDKKVIDAV----CNIWK 82 (161)
Q Consensus 7 ~~~~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 82 (161)
.++++|+++||. |+||+|+++|.+|+||.+|++||+++++++.++|.++.+++++++|+.+....+.... ...+.
T Consensus 38 ~~~~~~~~~nP~-g~vP~L~~~g~~l~ES~aI~~yl~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (210)
T TIGR01262 38 QRSPEFLALNPQ-GLVPTLDIDGEVLTQSLAIIEYLEETYPDPPLLPADPIKRARVRALALLIACDIHPLNNLRVLQYLR 116 (210)
T ss_pred cCChhhhhcCCC-CcCCEEEECCEEeecHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHhcccChhhhhhHHHHHH
Confidence 357899999999 9999999999999999999999999998778999999999999999998875554321 11111
Q ss_pred cC----CC-chhhhHHHHHHHHHHHHHHhCC--CCcccCCCCChhHHhHHHHHHHHHHh----hhhCCCCc-hhhhhchh
Q 038553 83 SK----GK-VPGTAKNEFIEILKQLVGALGE--KDFFGGDSFGFVDVIAIPLTCWFYAV----EKFGGFKV-ENECMQRE 150 (161)
Q Consensus 83 ~~----~~-~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~aD~~~~~~l~~~~~~----~~~~~~~~-~~~~~~rp 150 (161)
.. +. ..+...+.+.+.|+.||++|++ ++|++|+++|+||+++++.+.++... ..+|++.. .++|.+||
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~ADi~~~~~l~~~~~~~~~~~~~p~l~~~~~~~~~rp 196 (210)
T TIGR01262 117 EKLGVEEEARNRWYQHWISKGFAALEALLQPHAGAFCVGDTPTLADLCLVPQVYNAERFGVDLTPYPTLRRIAAALAALP 196 (210)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEeeCCCCCHHHHHHHHHHHHHHHcCCCcccchHHHHHHHHHhcCH
Confidence 11 11 1233456689999999999975 56999999999999999999877543 34566655 69999999
Q ss_pred hhhhhCCCC
Q 038553 151 TVARILPDP 159 (161)
Q Consensus 151 ~~~~~~~~~ 159 (161)
++++++.+.
T Consensus 197 ~~~~~~~~~ 205 (210)
T TIGR01262 197 AFQRAHPEN 205 (210)
T ss_pred HHHHhCccc
Confidence 999998764
No 11
>PRK11752 putative S-transferase; Provisional
Probab=99.94 E-value=7.7e-26 Score=167.35 Aligned_cols=151 Identities=19% Similarity=0.212 Sum_probs=117.0
Q ss_pred CCChhhhhhCCCCCccceEEeC----CeecccHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHhhhhhhh---hhh
Q 038553 7 GKSDLLLKSNPIYKKVPVLLHD----GKPLCESTVIVNYIDETWPSPPLLPSCASERAKARFWADFIDKKVIDA---VCN 79 (161)
Q Consensus 7 ~~~~~~~~~np~~~~vP~L~~~----~~~l~eS~~I~~yl~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~---~~~ 79 (161)
+++++|+++||. |+||+|+++ +.+|+||.+|++||+++++ .++|.++.++++++.|+.+..+..... +..
T Consensus 87 ~~~~e~~~iNP~-GkVP~Lv~~dg~~~~~L~ES~AIl~YL~~~~~--~L~P~~~~era~v~~wl~~~~~~~~~~~~~~~~ 163 (264)
T PRK11752 87 QFSSGFVEINPN-SKIPALLDRSGNPPIRVFESGAILLYLAEKFG--AFLPKDLAARTETLNWLFWQQGSAPFLGGGFGH 163 (264)
T ss_pred ccCHHHHhhCCC-CCCCEEEeCCCCCCeEEEcHHHHHHHHHHhcC--CcCCCCHHHHHHHHHHHHHHhhhhhHHHHHHHH
Confidence 457899999999 999999964 3689999999999999997 489999999999999999876543211 111
Q ss_pred hhhc-C---CCchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHh-----------hhhCCCCc-h
Q 038553 80 IWKS-K---GKVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWFYAV-----------EKFGGFKV-E 143 (161)
Q Consensus 80 ~~~~-~---~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~~~~-----------~~~~~~~~-~ 143 (161)
.+.. + ....+.....+.+.|+.||++|++++|++|+++|+||+++++++.++... ..+|++.. .
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~L~~le~~L~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~ 243 (264)
T PRK11752 164 FYAYAPEKIEYAINRFTMEAKRQLDVLDKQLAEHEYIAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWA 243 (264)
T ss_pred HHHhCCccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCccCHHHHHHHHHHHHHhhccccccccccCcccCHHHHHHH
Confidence 1211 1 12234456678899999999998889999999999999999988766421 23444444 6
Q ss_pred hhhhchhhhhhhCCCCC
Q 038553 144 NECMQRETVARILPDPE 160 (161)
Q Consensus 144 ~~~~~rp~~~~~~~~~~ 160 (161)
++|.+||++++++..+.
T Consensus 244 ~rv~~rPs~k~~~~~~~ 260 (264)
T PRK11752 244 KEIAERPAVKRGRIVNR 260 (264)
T ss_pred HHHHhCHHHHHHHhccc
Confidence 99999999999987653
No 12
>PLN02378 glutathione S-transferase DHAR1
Probab=99.93 E-value=1.6e-25 Score=160.93 Aligned_cols=147 Identities=23% Similarity=0.295 Sum_probs=111.0
Q ss_pred CCCCCCCChhhhhhCCCCCccceEEeCCeecccHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHhhhhhhhhhhhh
Q 038553 2 ENLFGGKSDLLLKSNPIYKKVPVLLHDGKPLCESTVIVNYIDETWPSPPLLPSCASERAKARFWADFIDKKVIDAVCNIW 81 (161)
Q Consensus 2 e~~~~~~~~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (161)
++|+..++++|+++||. |+||+|++||.+|+||.+|++||+++++++.+. ++.+++.+...+. ..+..++
T Consensus 41 ~v~~~~~~~~~l~inP~-G~VPvL~~~~~~l~ES~aI~~YL~~~~~~~~l~--~~~~~a~i~~~~~-------~~~~~~~ 110 (213)
T PLN02378 41 LINLSDKPQWFLDISPQ-GKVPVLKIDDKWVTDSDVIVGILEEKYPDPPLK--TPAEFASVGSNIF-------GTFGTFL 110 (213)
T ss_pred EeCcccCCHHHHHhCCC-CCCCEEEECCEEecCHHHHHHHHHHhCCCCCCC--CHHHHHHHHHHHH-------HHHHHHH
Confidence 57888899999999999 999999999999999999999999999865553 4556665554322 1122222
Q ss_pred hcCCCchhhhHHHHHHHHHHHHHHhC--CCCcccCCCCChhHHhHHHHHHHHHHh----------hhhCCCCc-hhhhhc
Q 038553 82 KSKGKVPGTAKNEFIEILKQLVGALG--EKDFFGGDSFGFVDVIAIPLTCWFYAV----------EKFGGFKV-ENECMQ 148 (161)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~le~~L~--~~~~l~G~~~t~aD~~~~~~l~~~~~~----------~~~~~~~~-~~~~~~ 148 (161)
... ...+.....+.+.|+.+|+.|+ +++|++|+++|+||+++++.+.++... ..+|++.. .++|.+
T Consensus 111 ~~~-~~~~~~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi~l~~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~ 189 (213)
T PLN02378 111 KSK-DSNDGSEHALLVELEALENHLKSHDGPFIAGERVSAVDLSLAPKLYHLQVALGHFKSWSVPESFPHVHNYMKTLFS 189 (213)
T ss_pred hcC-ChhhHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCchhhHHHHHHHHHHHHHHHHhcCCCchhHhHHHHHHHHHHhc
Confidence 221 1223445677888999999997 479999999999999999998775432 23444444 699999
Q ss_pred hhhhhhhCCCC
Q 038553 149 RETVARILPDP 159 (161)
Q Consensus 149 rp~~~~~~~~~ 159 (161)
||++++++++.
T Consensus 190 rpa~~~~~~~~ 200 (213)
T PLN02378 190 LDSFEKTKTEE 200 (213)
T ss_pred CCCeecccCCh
Confidence 99999988764
No 13
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.93 E-value=4.1e-25 Score=160.17 Aligned_cols=151 Identities=19% Similarity=0.278 Sum_probs=112.5
Q ss_pred CCCCCCCCChhhhhhCCCCCccceEEeCCeecccHHHHHHHHHhhCCC---CCCCCCCHHHHHHHHHHHHHHhhhhhhhh
Q 038553 1 AENLFGGKSDLLLKSNPIYKKVPVLLHDGKPLCESTVIVNYIDETWPS---PPLLPSCASERAKARFWADFIDKKVIDAV 77 (161)
Q Consensus 1 ~e~~~~~~~~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~~~~~~---~~l~p~~~~~~~~~~~~~~~~~~~~~~~~ 77 (161)
+++|+.+++++|+++||. |+||+|+++|.+|+||.+|++||+++++. +.+.|.++..++... + +...+
T Consensus 39 ~~vd~~~~~~~fl~inP~-g~vPvL~~~g~~l~ES~aI~eYL~e~~~~~~~p~l~p~~~~~~~~~~---~-----l~~~~ 109 (236)
T TIGR00862 39 TTVDLKRKPEDLQNLAPG-THPPFLTYNTEVKTDVNKIEEFLEETLCPPRYPKLSPKHPESNTAGL---D-----IFAKF 109 (236)
T ss_pred EEECCCCCCHHHHHHCcC-CCCCEEEECCEEeecHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHH---H-----HHHHH
Confidence 367888999999999998 99999999999999999999999999974 456666655433221 1 11111
Q ss_pred hhhhhcC-CCchhhhHHHHHHHHHHHHHHhC------------------CCCcccCCCCChhHHhHHHHHHHHHHh-h--
Q 038553 78 CNIWKSK-GKVPGTAKNEFIEILKQLVGALG------------------EKDFFGGDSFGFVDVIAIPLTCWFYAV-E-- 135 (161)
Q Consensus 78 ~~~~~~~-~~~~~~~~~~~~~~l~~le~~L~------------------~~~~l~G~~~t~aD~~~~~~l~~~~~~-~-- 135 (161)
..++... +...+...+.+.+.++.||+.|+ +++|+.|+++|+|||++++.+.++... +
T Consensus 110 ~~~~~~~~~~~~~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~~~f~~Gd~~tlaD~~l~p~l~~l~~~~~~~ 189 (236)
T TIGR00862 110 SAYIKNSNPEANDNLEKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKVSRRKFLDGDELTLADCNLLPKLHIVKVVAKKY 189 (236)
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccCCCcccCCccchhhHHHHHHHHHHHHHHHHH
Confidence 1222222 22334455668999999999986 579999999999999999999888753 2
Q ss_pred -------hhCCCCc-hhhhhchhhhhhhCCCCC
Q 038553 136 -------KFGGFKV-ENECMQRETVARILPDPE 160 (161)
Q Consensus 136 -------~~~~~~~-~~~~~~rp~~~~~~~~~~ 160 (161)
.++++.. .+++.+||+|+.+++..+
T Consensus 190 ~~~~i~~~~p~l~~w~~~~~~~~sf~~t~p~~~ 222 (236)
T TIGR00862 190 RNFDIPAEFTGVWRYLSNAYAREEFTNTCPDDK 222 (236)
T ss_pred hCcCccccCchHHHHHHHHhccchHHhhCCChH
Confidence 2333333 599999999999998753
No 14
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.93 E-value=3.3e-25 Score=149.81 Aligned_cols=152 Identities=25% Similarity=0.312 Sum_probs=124.7
Q ss_pred CCChhhhhhCCCCCccceEEeCCeecccHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHhhhhhhhhhhh----hh
Q 038553 7 GKSDLLLKSNPIYKKVPVLLHDGKPLCESTVIVNYIDETWPSPPLLPSCASERAKARFWADFIDKKVIDAVCNI----WK 82 (161)
Q Consensus 7 ~~~~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 82 (161)
....+|+++||. ++||+|++||.+++||.||++||++.+|+++|.|+++.-|+..++....+.+...+..... +.
T Consensus 44 q~~~ef~~iNPm-~kVP~L~i~g~tl~eS~AII~YLeEt~P~ppLLP~d~~KRA~~r~i~~~i~sgIQPlQNl~vl~~l~ 122 (217)
T KOG0868|consen 44 QSDSEFKEINPM-EKVPTLVIDGLTLTESLAIIEYLEETYPDPPLLPKDPHKRAKARAISLLIASGIQPLQNLSVLKMLN 122 (217)
T ss_pred hhhhHHhhcCch-hhCCeEEECCEEeehHHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHHHHHHhCCCcchhhHHHHHhc
Confidence 346699999999 9999999999999999999999999999999999999999999999998888877764322 22
Q ss_pred cCCC--chhhhHHHHHHHHHHHHHHhCC--CCcccCCCCChhHHhHHHHHHHHHHh----hhhCCCCc-hhhhhchhhhh
Q 038553 83 SKGK--VPGTAKNEFIEILKQLVGALGE--KDFFGGDSFGFVDVIAIPLTCWFYAV----EKFGGFKV-ENECMQRETVA 153 (161)
Q Consensus 83 ~~~~--~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~aD~~~~~~l~~~~~~----~~~~~~~~-~~~~~~rp~~~ 153 (161)
.+.. ...=..--+.+.+..||..|.. |+|.+||.+|+||+++.+.+.....+ ..||-+.+ .+++.+.|+|+
T Consensus 123 ek~~~~~~~W~q~~ItkGF~ALEklL~~~aGkycvGDevtiADl~L~pqv~nA~rf~vdl~PYPti~ri~e~l~elpaFq 202 (217)
T KOG0868|consen 123 EKEPGYGDQWAQHFITKGFTALEKLLKSHAGKYCVGDEVTIADLCLPPQVYNANRFHVDLTPYPTITRINEELAELPAFQ 202 (217)
T ss_pred ccccchhhHHHHHHHHHhHHHHHHHHHHccCCcccCceeehhhhccchhhhhhhhccccCCcCchHHHHHHHHHhCHHHH
Confidence 2222 1223444578899999999954 89999999999999999998765543 45666655 68899999999
Q ss_pred hhCCCC
Q 038553 154 RILPDP 159 (161)
Q Consensus 154 ~~~~~~ 159 (161)
.++++.
T Consensus 203 ~ahP~n 208 (217)
T KOG0868|consen 203 AAHPDN 208 (217)
T ss_pred hcCCCC
Confidence 999976
No 15
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.92 E-value=1.7e-24 Score=159.81 Aligned_cols=147 Identities=22% Similarity=0.258 Sum_probs=111.8
Q ss_pred CCCCCCCChhhhhhCCCCCccceEEeCCeecccHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHhhhhhhhhhhhh
Q 038553 2 ENLFGGKSDLLLKSNPIYKKVPVLLHDGKPLCESTVIVNYIDETWPSPPLLPSCASERAKARFWADFIDKKVIDAVCNIW 81 (161)
Q Consensus 2 e~~~~~~~~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (161)
++++.++++||+++||. |+||+|+++|.+|+||.+|++||+++++++.+. ++.+++++..++.. .+..++
T Consensus 94 ~vdl~~~~~~fl~iNP~-GkVPvL~~d~~~L~ES~aI~~YL~e~~p~~~L~--~~~era~i~~~l~~-------~~~~~~ 163 (265)
T PLN02817 94 LVDLTNKPEWFLKISPE-GKVPVVKLDEKWVADSDVITQALEEKYPDPPLA--TPPEKASVGSKIFS-------TFIGFL 163 (265)
T ss_pred EeCcCcCCHHHHhhCCC-CCCCEEEECCEEEecHHHHHHHHHHHCCCCCCC--CHHHHHHHHHHHHH-------HHHHHh
Confidence 46788899999999999 999999998899999999999999999976664 46678877665422 111222
Q ss_pred hcCCCchhhhHHHHHHHHHHHHHHhCC-CCcccCCCCChhHHhHHHHHHHHHHh-h---------hhCCCCc-hhhhhch
Q 038553 82 KSKGKVPGTAKNEFIEILKQLVGALGE-KDFFGGDSFGFVDVIAIPLTCWFYAV-E---------KFGGFKV-ENECMQR 149 (161)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~le~~L~~-~~~l~G~~~t~aD~~~~~~l~~~~~~-~---------~~~~~~~-~~~~~~r 149 (161)
... ...+...+.+.+.+..||++|++ ++|++|+++|+||+++++++.++... + .+|++.. +++|.+|
T Consensus 164 ~~~-~~~~~~~~~l~~~l~~LE~~L~~~g~yl~Gd~~SlADi~l~p~L~~l~~~~~~~~~~~i~~~~P~L~~w~~ri~~r 242 (265)
T PLN02817 164 KSK-DPGDGTEQALLDELTSFDDYIKENGPFINGEKISAADLSLGPKLYHLEIALGHYKNWSVPDSLPFVKSYMKNIFSM 242 (265)
T ss_pred ccC-CcchHHHHHHHHHHHHHHHHHhcCCCeeCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHhcc
Confidence 211 11223345678889999999974 79999999999999999999876532 1 2344443 5999999
Q ss_pred hhhhhhCCCC
Q 038553 150 ETVARILPDP 159 (161)
Q Consensus 150 p~~~~~~~~~ 159 (161)
|+|+++++..
T Consensus 243 ps~~~~~~~~ 252 (265)
T PLN02817 243 ESFVKTRALP 252 (265)
T ss_pred hhHhhcCCCH
Confidence 9999998754
No 16
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.91 E-value=5.4e-24 Score=152.20 Aligned_cols=142 Identities=15% Similarity=0.167 Sum_probs=102.8
Q ss_pred hhCCCCCccceEEeCCeecccHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCCchhhhHH
Q 038553 14 KSNPIYKKVPVLLHDGKPLCESTVIVNYIDETWPSPPLLPSCASERAKARFWADFIDKKVIDAVCNIWKSKGKVPGTAKN 93 (161)
Q Consensus 14 ~~np~~~~vP~L~~~~~~l~eS~~I~~yl~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (161)
.+||+ |+||+|++||.+|+||.+|++||+++++ +.+.+..+++.+..+.....+........... .+...+....
T Consensus 52 ~~nP~-g~vP~L~~~~~~l~eS~AI~~YLa~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 126 (205)
T PTZ00057 52 KDTPF-EQVPILEMDNIIFAQSQAIVRYLSKKYK---ICGESELNEFYADMIFCGVQDIHYKFNNTNLF-KQNETTFLNE 126 (205)
T ss_pred CCCCC-CCCCEEEECCEEEecHHHHHHHHHHHcC---CCCCCHHHHHHHHHHHHHHHHHHHHHhhhHHH-HHHHHHHHHH
Confidence 47999 9999999999999999999999999998 44555545545544433322222111110110 1112234567
Q ss_pred HHHHHHHHHHHHhCC--CCcccCCCCChhHHhHHHHHHHHHH-----hhhhCCCCc-hhhhhchhhhhhhCCCCC
Q 038553 94 EFIEILKQLVGALGE--KDFFGGDSFGFVDVIAIPLTCWFYA-----VEKFGGFKV-ENECMQRETVARILPDPE 160 (161)
Q Consensus 94 ~~~~~l~~le~~L~~--~~~l~G~~~t~aD~~~~~~l~~~~~-----~~~~~~~~~-~~~~~~rp~~~~~~~~~~ 160 (161)
.+.+.+..||++|++ ++|++|+++|+||+++++.+.++.. +..||.+.. .++|.+||++++++.+++
T Consensus 127 ~~~~~l~~le~~L~~~~~~~l~Gd~~T~AD~~l~~~~~~~~~~~~~~l~~~P~l~~~~~r~~~~P~~k~y~~~~~ 201 (205)
T PTZ00057 127 ELPKWSGYFENILKKNHCNYFVGDNLTYADLAVFNLYDDIETKYPNSLKNFPLLKAHNEFISNLPNIKNYISNRK 201 (205)
T ss_pred HHHHHHHHHHHHHHhCCCCeeeCCcccHHHHHHHHHHHHHHHhChhhhccChhHHHHHHHHHhChHHHHHHHhCC
Confidence 789999999999964 3899999999999999999877642 244666665 699999999999998775
No 17
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.90 E-value=2e-23 Score=151.15 Aligned_cols=152 Identities=24% Similarity=0.278 Sum_probs=127.1
Q ss_pred CCCCCChhhhhhCCCCCccceEEeCCeecccHHHHHHHHHhhCC--CCCCCCCCHHHHHHHHHHHHHHhhhhhhhh--hh
Q 038553 4 LFGGKSDLLLKSNPIYKKVPVLLHDGKPLCESTVIVNYIDETWP--SPPLLPSCASERAKARFWADFIDKKVIDAV--CN 79 (161)
Q Consensus 4 ~~~~~~~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~~~~~--~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~--~~ 79 (161)
..++++|+|+++||+ |+||+|+|+|..++||.||+.||.++|. +..++|.+...++.+++|+.+.++.+.... ..
T Consensus 37 ~ge~~~pefl~~nP~-~kVP~l~d~~~~l~eS~AI~~Yl~~ky~~~~~~l~p~~~~~ra~v~~~l~~~~~~l~~~~~~~~ 115 (226)
T KOG0867|consen 37 KGEQKSPEFLKLNPL-GKVPALEDGGLTLWESHAILRYLAEKYGPLGGILLPKDLKERAIVDQWLEFENGVLDPVTFERP 115 (226)
T ss_pred ccccCCHHHHhcCcC-CCCCeEecCCeEEeeHHHHHHHHHHHcCCCCcccCCcCHHHHHHHHHHHHhhhcccccccccce
Confidence 457899999999999 9999999999999999999999999996 334999999999999999999999888873 33
Q ss_pred hhhc-------CCCchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHH--Hh-----hhhCCCCc-hh
Q 038553 80 IWKS-------KGKVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWFY--AV-----EKFGGFKV-EN 144 (161)
Q Consensus 80 ~~~~-------~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~~--~~-----~~~~~~~~-~~ 144 (161)
.+.. ...........+.+.++.+|..|.++.|+.|+++|+||+.+.+.+..+. .. ..+|++.. .+
T Consensus 116 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~yl~g~~~tlADl~~~~~~~~~~~~~~~~~~~~~~p~v~~W~~ 195 (226)
T KOG0867|consen 116 ILAPLLVGLPLNPTAVKELEAKLRKALDNLERFLKTQVYLAGDQLTLADLSLASTLSQFQGKFATEKDFEKYPKVARWYE 195 (226)
T ss_pred eeecceecccCcchhhHHHHHHHHHHHHHHHHHHccCCcccCCcccHHHHHHhhHHHHHhHhhhhhhhhhhChHHHHHHH
Confidence 3322 2455678889999999999999999999999999999999999888773 22 23555554 68
Q ss_pred hhhchhhhhhhC
Q 038553 145 ECMQRETVARIL 156 (161)
Q Consensus 145 ~~~~rp~~~~~~ 156 (161)
++.++|++++..
T Consensus 196 ~~~~~P~~~e~~ 207 (226)
T KOG0867|consen 196 RIQKRPAYEEAN 207 (226)
T ss_pred HHHhCccHHHHH
Confidence 888888877754
No 18
>PRK10387 glutaredoxin 2; Provisional
Probab=99.86 E-value=2.6e-21 Score=138.57 Aligned_cols=135 Identities=18% Similarity=0.120 Sum_probs=101.6
Q ss_pred hhhCCCCCccceEE-eCCeecccHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHhhhhhhhhhhhhhcC---C---
Q 038553 13 LKSNPIYKKVPVLL-HDGKPLCESTVIVNYIDETWPSPPLLPSCASERAKARFWADFIDKKVIDAVCNIWKSK---G--- 85 (161)
Q Consensus 13 ~~~np~~~~vP~L~-~~~~~l~eS~~I~~yl~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--- 85 (161)
.++||. |+||+|+ +||.+|+||.+|++||+++||++.+.+. +++.++.|+.+....+...+...+... .
T Consensus 40 ~~~~p~-~~VPvL~~~~g~~l~eS~aI~~yL~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (210)
T PRK10387 40 IRMIGQ-KQVPILQKDDGSYMPESLDIVHYIDELDGKPLLTGK---RSPAIEEWLRKVFGYLNKLLYPRFAKADLPEFAT 115 (210)
T ss_pred HHhcCC-cccceEEecCCeEecCHHHHHHHHHHhCCCccCCCc---ccHHHHHHHHHHHHHhhcchhcccccCCCcccCC
Confidence 678998 9999995 8999999999999999999986555322 567888888887665554433222100 0
Q ss_pred ----------------------CchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhh---hhCCC
Q 038553 86 ----------------------KVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWFYAVE---KFGGF 140 (161)
Q Consensus 86 ----------------------~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~~~~~---~~~~~ 140 (161)
...+...+.+.+.|+.+|++|++ +|++|+++|+||+++++++.|+.... .+|++
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~-~~l~G~~~s~ADi~l~~~l~~~~~~~~~~~~p~l 194 (210)
T PRK10387 116 PSARQYFIDKKEASIGDFDALLAHTPGLIKEINADLRALDPLIVK-PNAVNGELSTDDIHLFPILRNLTLVKGIEWPPRV 194 (210)
T ss_pred HHHHHHHHHhHHhccCCHHHHHhcCHHHHHHHHHHHHHHHHHhcC-ccccCCCCCHHHHHHHHHHhcceeecCCCCCHHH
Confidence 01134567899999999999976 99999999999999999998876532 23444
Q ss_pred Cc-hhhhhchhhh
Q 038553 141 KV-ENECMQRETV 152 (161)
Q Consensus 141 ~~-~~~~~~rp~~ 152 (161)
.. .+||.+||++
T Consensus 195 ~~w~~r~~~r~~~ 207 (210)
T PRK10387 195 ADYRDNMSKKTQV 207 (210)
T ss_pred HHHHHHHHHHhCC
Confidence 44 6999999876
No 19
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.84 E-value=1.7e-20 Score=132.59 Aligned_cols=146 Identities=19% Similarity=0.238 Sum_probs=119.1
Q ss_pred hhhhhCCCCCccceEEeCCeecccHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHhhhhhhhhhhhhhcC--CC--
Q 038553 11 LLLKSNPIYKKVPVLLHDGKPLCESTVIVNYIDETWPSPPLLPSCASERAKARFWADFIDKKVIDAVCNIWKSK--GK-- 86 (161)
Q Consensus 11 ~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-- 86 (161)
..+...|+ |++|+|..||..|.||.||++||+++|+ +.++++.+.+.++.+.+...+.....+...+... ..
T Consensus 42 ~~K~~~pf-gqlP~l~vDg~~i~QS~AI~RyLArk~g---l~Gkt~~E~a~vD~i~d~~~D~~~~~~~~~~~~~~~g~~~ 117 (206)
T KOG1695|consen 42 ELKDKMPF-GQLPVLEVDGKKLVQSRAILRYLARKFG---LAGKTEEEEAWVDMIVDQFKDFRWEIFRQPYTAPEAGKSE 117 (206)
T ss_pred hhcccCCC-CCCCEEeECCEeeccHHHHHHHHHHHhC---cCCCCHHHHHHHHHHHHhhhhHHHHHHHHhhhhhhhccch
Confidence 44556899 9999999999999999999999999999 9999999999999999999987777555554432 11
Q ss_pred -chh-hhHHHHHHHHHHHHHHhC--CCCcccCCCCChhHHhHHHHHHHHHHh------hhhCCCCc-hhhhhchhhhhhh
Q 038553 87 -VPG-TAKNEFIEILKQLVGALG--EKDFFGGDSFGFVDVIAIPLTCWFYAV------EKFGGFKV-ENECMQRETVARI 155 (161)
Q Consensus 87 -~~~-~~~~~~~~~l~~le~~L~--~~~~l~G~~~t~aD~~~~~~l~~~~~~------~~~~~~~~-~~~~~~rp~~~~~ 155 (161)
..+ .......+.+..++..|. ++.|++||++|+||+.++..+..+... ..+|.+.. ..++.++|.++++
T Consensus 118 ~~~~~~~~Pa~~~~~~~~~~~L~~~~sgflvGd~lT~aDl~i~e~l~~l~~~~~~~~~~~~P~L~a~~~kv~~~p~ik~~ 197 (206)
T KOG1695|consen 118 EELDKLYLPAKPKYFKILEKILKKNKSGFLVGDKLTWADLVIAEHLDTLEELLDPSALDHFPKLKAFKERVSSIPNIKKY 197 (206)
T ss_pred hhhhhhhccchHHHHHHHHHHHHhCCCCeeecCcccHHHHHHHHHHHHHHHhcCchhhccChHHHHHHHHHhcCchHHHH
Confidence 111 466678889999999986 468999999999999999999887762 12355544 6999999999999
Q ss_pred CCCCC
Q 038553 156 LPDPE 160 (161)
Q Consensus 156 ~~~~~ 160 (161)
+.+++
T Consensus 198 i~~r~ 202 (206)
T KOG1695|consen 198 LESRP 202 (206)
T ss_pred HhcCC
Confidence 98874
No 20
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=99.81 E-value=1.2e-19 Score=130.07 Aligned_cols=137 Identities=18% Similarity=0.203 Sum_probs=100.6
Q ss_pred hhhhhCCCCCccceEE-eCCeecccHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHhhhhhhhhhhhhhc------
Q 038553 11 LLLKSNPIYKKVPVLL-HDGKPLCESTVIVNYIDETWPSPPLLPSCASERAKARFWADFIDKKVIDAVCNIWKS------ 83 (161)
Q Consensus 11 ~~~~~np~~~~vP~L~-~~~~~l~eS~~I~~yl~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 83 (161)
...++||. |+||+|+ +||.+++||.+|++||+++||.+.+.|. .+.+++.|+.+....+...+.+.+..
T Consensus 37 ~~~~~np~-g~vP~l~~~~g~~l~es~~I~~yL~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (209)
T TIGR02182 37 TPIRMIGA-KQVPILQKDDGRAMPESLDIVAYFDKLDGEPLLTGK---VSPEIEAWLRKVTGYANKLLLPRFAKSDLPEF 112 (209)
T ss_pred hHHHhcCC-CCcceEEeeCCeEeccHHHHHHHHHHhCCCccCCCC---ChHHHHHHHHHHHHHhhhhhccccccCCCccc
Confidence 34789999 9999998 8999999999999999999986444332 45677888877666554443322211
Q ss_pred -----------CC-----------CchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhh--hhC-
Q 038553 84 -----------KG-----------KVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWFYAVE--KFG- 138 (161)
Q Consensus 84 -----------~~-----------~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~~~~~--~~~- 138 (161)
+. ...+...+.+++.|+.+|++|++++|++| ++|+||+++++++.|+...+ .++
T Consensus 113 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g-~~TiADi~l~~~l~~~~~~~~~~~p~ 191 (209)
T TIGR02182 113 ATQSARKYFTDKKEASAGNFSALLNHTPGLLEEINADLEELDKLIDGPNAVNG-ELSEDDILVFPLLRNLTLVAGINWPS 191 (209)
T ss_pred CCHHHHHHHHHHHHHhcCCHHHHHccCHHHHHHHHHHHHHHHHHHhCccccCC-CCCHHHHHHHHHhcCeeeecCCCCCh
Confidence 00 01145667889999999999999999965 69999999999998876532 233
Q ss_pred CCCc-hhhhhchhhh
Q 038553 139 GFKV-ENECMQRETV 152 (161)
Q Consensus 139 ~~~~-~~~~~~rp~~ 152 (161)
++.. .+||.+|+++
T Consensus 192 ~l~~w~~Ri~ar~~~ 206 (209)
T TIGR02182 192 RVADYLDNMSKKSKV 206 (209)
T ss_pred HHHHHHHHHHHHhCC
Confidence 3433 6899988875
No 21
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=99.77 E-value=2.4e-18 Score=122.99 Aligned_cols=153 Identities=16% Similarity=0.229 Sum_probs=104.0
Q ss_pred CCCCChhhhhhCCCCCccceEEeCCeecccHHHHHHHHHhhCC-CCCCCCCC-HHHHHHHHHHHH---------HHhhhh
Q 038553 5 FGGKSDLLLKSNPIYKKVPVLLHDGKPLCESTVIVNYIDETWP-SPPLLPSC-ASERAKARFWAD---------FIDKKV 73 (161)
Q Consensus 5 ~~~~~~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~~~~~-~~~l~p~~-~~~~~~~~~~~~---------~~~~~~ 73 (161)
-+++.|||..+||. |.||+|.+|+.+|+++..|+.|++++|- ++.|.|.- .....++...-. |..+++
T Consensus 62 geh~epwFmrlNp~-gevPVl~~g~~II~d~tqIIdYvErtf~ger~l~pe~~S~~~d~~l~~e~~l~~lpm~~~t~g~~ 140 (325)
T KOG4420|consen 62 GEHKEPWFMRLNPG-GEVPVLIHGDNIISDYTQIIDYVERTFTGERVLMPEVGSLQHDRVLQYEELLDALPMDAYTHGCI 140 (325)
T ss_pred ccccCchheecCCC-CCCceEecCCeecccHHHHHHHHHHhhcccccccccccccccHHHHHHHHHHHhcCcchhhcccc
Confidence 46789999999998 9999999999999999999999999985 56677742 112222111111 111000
Q ss_pred -hh---------hh---hhhhh------------c-C----------------------CCchhhhHHHHHHHHHHHHHH
Q 038553 74 -ID---------AV---CNIWK------------S-K----------------------GKVPGTAKNEFIEILKQLVGA 105 (161)
Q Consensus 74 -~~---------~~---~~~~~------------~-~----------------------~~~~~~~~~~~~~~l~~le~~ 105 (161)
++ .. ++... + + ..........+.+.|+..|+.
T Consensus 141 lh~eL~~~s~iP~~~~iR~~~~k~~~~v~~l~~~e~pdla~ay~akqkkl~~kl~~hdd~s~lkkild~l~~~Ld~VEte 220 (325)
T KOG4420|consen 141 LHPELTTDSMIPKYAEIRRHLAKATTDVMKLDHEEEPDLAEAYLAKQKKLMAKLLEHDDVSYLKKILDELAMVLDQVETE 220 (325)
T ss_pred ccchhhccccCcccHHHHHHHHHHHHHHHHHHhhcCchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00 00000 0 0 011233455566677777777
Q ss_pred hCC----CCcccCCCCChhHHhHHHHHHHHHHhh---------hhCCCCc-hhhhhchhhhhhhCCC
Q 038553 106 LGE----KDFFGGDSFGFVDVIAIPLTCWFYAVE---------KFGGFKV-ENECMQRETVARILPD 158 (161)
Q Consensus 106 L~~----~~~l~G~~~t~aD~~~~~~l~~~~~~~---------~~~~~~~-~~~~~~rp~~~~~~~~ 158 (161)
|.. ..|++|+.+|+||+++...|+++..++ ..|++.. +.|+.+|++|+++++.
T Consensus 221 Le~r~~~~~wL~G~efslADVsLg~~LhRL~~Lg~e~~yw~~gsrpnle~Yf~rvrrR~sf~kvlg~ 287 (325)
T KOG4420|consen 221 LEKRKLCELWLCGCEFSLADVSLGATLHRLKFLGLEKKYWEDGSRPNLESYFERVRRRFSFRKVLGD 287 (325)
T ss_pred HhhccccceeeccccchHHHHHHHHHHHHHHHcccHHHhcccCCCccHHHHHHHHHhhhHHHHhhhh
Confidence 765 689999999999999999999988653 3555655 6999999999999875
No 22
>PLN02907 glutamate-tRNA ligase
Probab=99.76 E-value=3.8e-18 Score=140.18 Aligned_cols=119 Identities=20% Similarity=0.228 Sum_probs=99.1
Q ss_pred hCCCCCccceEE-eCCeecccHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCCchhhhHH
Q 038553 15 SNPIYKKVPVLL-HDGKPLCESTVIVNYIDETWPSPPLLPSCASERAKARFWADFIDKKVIDAVCNIWKSKGKVPGTAKN 93 (161)
Q Consensus 15 ~np~~~~vP~L~-~~~~~l~eS~~I~~yl~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (161)
.+|. |+||+|+ ++|.+|+||.+|++||++.+++..|+|.++.+++++++|+.+...... ..
T Consensus 32 ~~p~-GkVPvLv~ddG~~L~ES~AIl~YLa~~~p~~~L~p~d~~erAqV~qWL~~~~~~~~-----------------~~ 93 (722)
T PLN02907 32 SLKS-GSAPTLLFSSGEKLTGTNVLLRYIARSASLPGFYGQDAFESSQVDEWLDYAPTFSS-----------------GS 93 (722)
T ss_pred cCCC-CCCcEEEECCCCEEECHHHHHHHHHHhCCCcCCCCCCHHHHHHHHHHHHHHhhccc-----------------HH
Confidence 4798 9999999 688999999999999999998888999999999999999998764210 12
Q ss_pred HHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHH--HH-----hhhhCCCCc-hhhhhchhh
Q 038553 94 EFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWF--YA-----VEKFGGFKV-ENECMQRET 151 (161)
Q Consensus 94 ~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~--~~-----~~~~~~~~~-~~~~~~rp~ 151 (161)
.+...++.||.+|++++||+|+++|+||+++++.+... .+ ...+|++.. +++|.+||+
T Consensus 94 ~l~~~L~~LE~~L~~rtYLvGd~lTLADIaL~~~L~~~~~~~~~~~~~~~yPnL~RW~erI~arPs 159 (722)
T PLN02907 94 EFENACEYVDGYLASRTFLVGYSLTIADIAIWSGLAGSGQRWESLRKSKKYQNLVRWFNSISAEYS 159 (722)
T ss_pred HHHHHHHHHHHHhccCCeecCCCCCHHHHHHHHHHHhhhhhhhcccccccCHHHHHHHHHHHhCCC
Confidence 46778999999999999999999999999999987554 11 134566655 699999999
No 23
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=99.75 E-value=2.7e-17 Score=114.25 Aligned_cols=149 Identities=21% Similarity=0.345 Sum_probs=116.3
Q ss_pred CCCCCCChhhhhhCCCCCccceEEeCCeecccHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHhhhhhhhhhhhhh
Q 038553 3 NLFGGKSDLLLKSNPIYKKVPVLLHDGKPLCESTVIVNYIDETWPSPPLLPSCASERAKARFWADFIDKKVIDAVCNIWK 82 (161)
Q Consensus 3 ~~~~~~~~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (161)
||+..+++||+++.|. +++|+|..++..++||..|.++|++++|++.+.-..+.|.+. +...+...+..++.
T Consensus 43 Vd~~~kp~~f~~~sp~-~~~P~l~~d~~~~tDs~~Ie~~Lee~l~~p~~~~~~~~E~as-------ag~diF~kF~~fi~ 114 (221)
T KOG1422|consen 43 VDLSRKPEWFLDISPG-GKPPVLKFDEKWVTDSDKIEEFLEEKLPPPKLPTLAPPESAS-------AGSDIFAKFSAFIK 114 (221)
T ss_pred eecCCCcHHHHhhCCC-CCCCeEEeCCceeccHHHHHHHHHHhcCCCCCcccCCHHHHh-------hHHHHHHHHHHHHh
Confidence 7889999999999998 999999999999999999999999999965543222223221 22234444455543
Q ss_pred -cCCCchhhhHHHHHHHHHHHHHHhCC---CCcccCCCCChhHHhHHHHHHHHHHh-hhhCCCCch----------hhhh
Q 038553 83 -SKGKVPGTAKNEFIEILKQLVGALGE---KDFFGGDSFGFVDVIAIPLTCWFYAV-EKFGGFKVE----------NECM 147 (161)
Q Consensus 83 -~~~~~~~~~~~~~~~~l~~le~~L~~---~~~l~G~~~t~aD~~~~~~l~~~~~~-~~~~~~~~~----------~~~~ 147 (161)
..+...+...+.+...|..|++.|+. ++|+.||++|.||+.+.+-|+-+... +.|.+++.. ..+.
T Consensus 115 ksk~~~n~~~e~~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aDcsLlPKL~~i~va~k~yk~~~IP~~lt~V~rYl~~~y 194 (221)
T KOG1422|consen 115 KSKDAANDGLEKALLKELEKLDDYLKSPSRRKFLDGDKLTLADCSLLPKLHHIKVAAKHYKNFEIPASLTGVWRYLKNAY 194 (221)
T ss_pred CchhhccchHHHHHHHHHHHHHHHhcCccCCccccCCeeeeehhhhchhHHHHHHHHHHhcCCCCchhhhHHHHHHHHHH
Confidence 34556666778889999999999975 89999999999999999999888754 567777652 6688
Q ss_pred chhhhhhhCCCC
Q 038553 148 QRETVARILPDP 159 (161)
Q Consensus 148 ~rp~~~~~~~~~ 159 (161)
+|.+|..+.++.
T Consensus 195 a~d~F~~tcp~d 206 (221)
T KOG1422|consen 195 ARDEFTNTCPAD 206 (221)
T ss_pred hHHHhhcCCchH
Confidence 999999988865
No 24
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.58 E-value=1.2e-14 Score=96.05 Aligned_cols=103 Identities=42% Similarity=0.647 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhcCCCchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHh--
Q 038553 57 SERAKARFWADFIDKKVIDAVCNIWKSKGKVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWFYAV-- 134 (161)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~~~~-- 134 (161)
.++++.+.|+.+....+.+.+...+...+...+.....+.+.++.+|++|++++|++|+++|+||+++++++.++...
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~ADi~l~~~~~~~~~~~~ 81 (126)
T cd03185 2 YERAVARFWAAFIDDKLFPAGRKVLAAKGEEREKAKEEALEALKVLEEELGGKPFFGGDTIGYVDIALGSFLGWFRAYEE 81 (126)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHHHHHHHH
Confidence 368899999999998888877666554444556678889999999999998899999999999999999999887543
Q ss_pred ---------hhhCCCCc-hhhhhchhhhhhhCCCC
Q 038553 135 ---------EKFGGFKV-ENECMQRETVARILPDP 159 (161)
Q Consensus 135 ---------~~~~~~~~-~~~~~~rp~~~~~~~~~ 159 (161)
..+|++.. .++|.+||+++++++..
T Consensus 82 ~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~ 116 (126)
T cd03185 82 VGGVKLLDEEKTPLLAAWAERFLELEAVKEVLPDR 116 (126)
T ss_pred HcCccccCcccCchHHHHHHHHHhccHHHHhCCCH
Confidence 12344444 59999999999998764
No 25
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.58 E-value=1e-14 Score=93.77 Aligned_cols=100 Identities=24% Similarity=0.311 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhcCCCchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhh-
Q 038553 57 SERAKARFWADFIDKKVIDAVCNIWKSKGKVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWFYAVE- 135 (161)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~~~~~- 135 (161)
.++++++.|+.++.+.+.+.+..+...++...+...+.+.+.+..+|+.|++++|++|+++|+||+++++++.++...+
T Consensus 2 ~~ra~~r~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~~~~ 81 (107)
T cd03186 2 VARARSRLLMHRIEQDWYPLVDTIEKGRKKEAEKARKELRESLLALAPVFAHKPYFMSEEFSLVDCALAPLLWRLPALGI 81 (107)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCcHHHHHHHHHHHHHHHcCC
Confidence 4689999999999998888876665444445666788899999999999999999999999999999999986655332
Q ss_pred ----hhCCCCc-hhhhhchhhhhhhC
Q 038553 136 ----KFGGFKV-ENECMQRETVARIL 156 (161)
Q Consensus 136 ----~~~~~~~-~~~~~~rp~~~~~~ 156 (161)
.+|++.. .++|.+||++++++
T Consensus 82 ~~~~~~p~l~~w~~~~~~rpa~~~~~ 107 (107)
T cd03186 82 ELPKQAKPLKDYMERVFARDSFQKSL 107 (107)
T ss_pred CCcccchHHHHHHHHHHCCHHHHHhC
Confidence 2344444 69999999999753
No 26
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.54 E-value=4.3e-14 Score=92.22 Aligned_cols=102 Identities=13% Similarity=0.121 Sum_probs=81.7
Q ss_pred CHHHHHHHHHHHHHHhhhhhhhhhhhhhcC---CCchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHH
Q 038553 55 CASERAKARFWADFIDKKVIDAVCNIWKSK---GKVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWF 131 (161)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~ 131 (161)
++..++++++|..+....+.+.+....... .+..+.....+.+.++.+|++|++++|++|+++|+||+++++.+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~le~~L~~~~yl~Gd~~tlADi~l~~~l~~~ 82 (115)
T cd03196 3 DPAALKEMLALIAENDNEFKHHLDRYKYADRYPEESEEEYRQQAEAFLKDLEARLQQHSYLLGDKPSLADWAIFPFVRQF 82 (115)
T ss_pred chHHHHHHHHHHHHcchhhHHHHHhccchhhcCcccHHHHHHHHHHHHHHHHHHHccCCccCCCCccHHHHHHHHHHHHH
Confidence 677899999999999999888776653321 22467788899999999999999899999999999999999988665
Q ss_pred HHh-------hhhCCCCc-hhhhhchhhhhhhC
Q 038553 132 YAV-------EKFGGFKV-ENECMQRETVARIL 156 (161)
Q Consensus 132 ~~~-------~~~~~~~~-~~~~~~rp~~~~~~ 156 (161)
... ..+|++.. .++|.+||++++++
T Consensus 83 ~~~~~~~~~~~~~P~L~~w~~r~~~rpa~~~~~ 115 (115)
T cd03196 83 AHVDPKWFDQSPYPRLRRWLNGFLASPLFSKIM 115 (115)
T ss_pred HHhhhcccCcccCHHHHHHHHHHHcChHHHhhC
Confidence 432 23444444 69999999999864
No 27
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.51 E-value=1.1e-13 Score=93.58 Aligned_cols=101 Identities=17% Similarity=0.169 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhh-cCCCchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHH---
Q 038553 58 ERAKARFWADFIDKKVIDAVCNIWK-SKGKVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWFYA--- 133 (161)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~~~--- 133 (161)
.++++++|++|..+.+.+.+..... ..++..+.....+.+.|+.||+.|++++|++|+++|+||+++++++.++..
T Consensus 4 ~~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~LE~~L~~~~yl~Gd~~TlADi~l~~~l~~~~~~~~ 83 (142)
T cd03190 4 LRSEIDELNEWIYDNINNGVYKAGFATTQEAYDEAVDELFEALDRLEELLSDRRYLLGDRLTEADIRLFTTLIRFDAVYV 83 (142)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHccCCeeeCCCccHHHHHHHHHHHHHHHHhh
Confidence 5788999999999998887665543 334556778889999999999999989999999999999999999876522
Q ss_pred ---------hhhhCCCCc-hhhhhchhhhhhhCCC
Q 038553 134 ---------VEKFGGFKV-ENECMQRETVARILPD 158 (161)
Q Consensus 134 ---------~~~~~~~~~-~~~~~~rp~~~~~~~~ 158 (161)
...+|++.. .++|.+||+++++...
T Consensus 84 ~~~~~~~~~~~~~P~L~~w~~r~~~~P~~k~~~~~ 118 (142)
T cd03190 84 QHFKCNLKRIRDYPNLWNYLRRLYQNPGVAETTNF 118 (142)
T ss_pred hhcccccchhhhCchHHHHHHHHhcCchHhhhcCH
Confidence 134666655 6999999999998764
No 28
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.48 E-value=1.6e-13 Score=90.62 Aligned_cols=101 Identities=25% Similarity=0.325 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhcCCCchhhhHHHHHHHHHHHHHHhCC--CCcccCCCCChhHHhHHHHHHHHHHhh
Q 038553 58 ERAKARFWADFIDKKVIDAVCNIWKSKGKVPGTAKNEFIEILKQLVGALGE--KDFFGGDSFGFVDVIAIPLTCWFYAVE 135 (161)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~aD~~~~~~l~~~~~~~ 135 (161)
++++.+.|++..+..+.+.+ ..+.. ++..+...+.+...++.+|+.|++ ++|++|+++|+||+++++++.++...+
T Consensus 2 ~ra~~r~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~~~~~~~~~~~~ 79 (124)
T cd03184 2 EKAQQKLLLERFSKVVSAFY-KLLGA-PSDREEKKAELRSALENLEEELTKRGTPFFGGDSPGMVDYMIWPWFERLEALK 79 (124)
T ss_pred hHHHHHHHHHHHhhhhHHHH-HHHhc-cccchhhHHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHhhHHHHHHHHHH
Confidence 47899999999975444444 44444 566778889999999999999975 899999999999999999998776442
Q ss_pred ----------hhCCCCc-hhhhhchhhhhhhCCCCC
Q 038553 136 ----------KFGGFKV-ENECMQRETVARILPDPE 160 (161)
Q Consensus 136 ----------~~~~~~~-~~~~~~rp~~~~~~~~~~ 160 (161)
.+|++.. .++|.+||++++++++++
T Consensus 80 ~~~~~~~~~~~~p~l~~w~~r~~~~p~v~~~~~~~~ 115 (124)
T cd03184 80 LLLGYEFPLDRFPKLKKWMDAMKEDPAVQAFYTDTE 115 (124)
T ss_pred hhccccCCcccChHHHHHHHHhccChHHHHHhCCHH
Confidence 2444444 599999999999988754
No 29
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.47 E-value=1.3e-13 Score=89.27 Aligned_cols=99 Identities=20% Similarity=0.331 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhcC---------CCchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHH
Q 038553 58 ERAKARFWADFIDKKVIDAVCNIWKSK---------GKVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLT 128 (161)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l 128 (161)
+++++++|+.|..+.+.+.+....... +...+.....+.+.++.+|+.|++++|++|+++|+||+++++.+
T Consensus 2 ~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~aDi~~~~~~ 81 (114)
T cd03188 2 ERARLLEWLNFLSSELHKAFGPLFYPARWATDEAAQEEVKAAARERLAARLAYLDAQLAGGPYLLGDRFSVADAYLFVVL 81 (114)
T ss_pred cHHHHHHHHHHHhhhhchhhhhcccccccccChhhHHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCCcchHHHHHHHHH
Confidence 478999999999988888765444321 12235567789999999999999889999999999999999998
Q ss_pred HHHHHh----hhhCCCCc-hhhhhchhhhhhhC
Q 038553 129 CWFYAV----EKFGGFKV-ENECMQRETVARIL 156 (161)
Q Consensus 129 ~~~~~~----~~~~~~~~-~~~~~~rp~~~~~~ 156 (161)
.++... ..+|.+.. .++|.++|++++++
T Consensus 82 ~~~~~~~~~~~~~p~l~~w~~~~~~~p~~k~~~ 114 (114)
T cd03188 82 RWAPGVGLDLSDWPNLAAYLARVAARPAVQAAL 114 (114)
T ss_pred HHHhhcCCChhhChHHHHHHHHHHhCHHhHhhC
Confidence 876543 23455544 69999999999864
No 30
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.47 E-value=3e-14 Score=103.02 Aligned_cols=135 Identities=19% Similarity=0.261 Sum_probs=110.1
Q ss_pred ccceEEeC--Ceec-ccHHHHHHHHHhhCC-----CCCCCCCCHHHHHHHHHHHHHHhhhhhhhhhhh-hhcCCCchhhh
Q 038553 21 KVPVLLHD--GKPL-CESTVIVNYIDETWP-----SPPLLPSCASERAKARFWADFIDKKVIDAVCNI-WKSKGKVPGTA 91 (161)
Q Consensus 21 ~vP~L~~~--~~~l-~eS~~I~~yl~~~~~-----~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 91 (161)
+||+|.|. .+++ +||..|++-++..|. ...++|.. -+.+++.+.+|+.+.+...+... +...++..+++
T Consensus 129 TVPVLwDk~~~tIVnNES~eIirm~N~aFde~~~~~~dlyP~~--Lr~eId~~n~~Iy~~vNNGVYk~GFA~tq~aYeea 206 (324)
T COG0435 129 TVPVLWDKKTQTIVNNESAEIIRMFNSAFDEFGASAVDLYPEA--LRTEIDELNKWIYDTVNNGVYKAGFATTQEAYEEA 206 (324)
T ss_pred eEEEEEecCCCeeecCCcHHHHHHHHHHHHHHhhhccccCCHH--HHHHHHHHHhhhcccccCceeeecccchHHHHHHH
Confidence 79999974 3444 699999999987764 45788865 68899999999999888876555 33457788999
Q ss_pred HHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHH------------hhhhCCCCc-hhhhhchhhhhhhCC
Q 038553 92 KNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWFYA------------VEKFGGFKV-ENECMQRETVARILP 157 (161)
Q Consensus 92 ~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~~~------------~~~~~~~~~-~~~~~~rp~~~~~~~ 157 (161)
.+.+...|++||..|+++.|++|+++|.||+.+|+.|-++.. +..||++.. ...+.+.|.|+.+..
T Consensus 207 ~~~lF~~Ld~lE~~L~~~ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN~~rI~dypnL~~yLr~LYq~pg~~~T~d 285 (324)
T COG0435 207 VKKLFEALDKLEQILSERRYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCNLRRIRDYPNLWGYLRDLYQLPGFAETVD 285 (324)
T ss_pred HHHHHHHHHHHHHHhhcCeeeccccchHhhhhhhheeEeecceEEeeeecccchhhcCchHHHHHHHHhcCcccccccc
Confidence 999999999999999999999999999999999999877653 234777766 577888998887753
No 31
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.46 E-value=4e-13 Score=88.32 Aligned_cols=103 Identities=14% Similarity=0.178 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhcC-CCchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHh--
Q 038553 58 ERAKARFWADFIDKKVIDAVCNIWKSK-GKVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWFYAV-- 134 (161)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~~~~-- 134 (161)
++++++++++.+.+........++..+ +...+.....+.+.+..||++|++++|++|+++|+||+++++++.|+...
T Consensus 2 e~~~id~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~T~aDi~l~~~~~~~~~~~~ 81 (121)
T cd03209 2 ERIRVDMLEQQAMDLRMGLARICYSPDFEKLKPDYLAKLPDKLKLFSDFLGDRPWFAGDKITYVDFLLYEALDQHRIFEP 81 (121)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHHHHhCCCCCcCCCCccHHHHHHHHHHHHHHHhCc
Confidence 467788888877775433322222222 23345567778999999999998889999999999999999999887643
Q ss_pred ---hhhCCCCc-hhhhhchhhhhhhCCCCC
Q 038553 135 ---EKFGGFKV-ENECMQRETVARILPDPE 160 (161)
Q Consensus 135 ---~~~~~~~~-~~~~~~rp~~~~~~~~~~ 160 (161)
..+|++.. .+++.+||++++++++++
T Consensus 82 ~~~~~~P~l~~~~~rv~~~p~vk~~~~~~~ 111 (121)
T cd03209 82 DCLDAFPNLKDFLERFEALPKISAYMKSDR 111 (121)
T ss_pred cccccChHHHHHHHHHHHCHHHHHHHhccc
Confidence 34566655 699999999999998875
No 32
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.45 E-value=5.8e-13 Score=87.07 Aligned_cols=100 Identities=14% Similarity=0.160 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhh----cCCCchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHH
Q 038553 58 ERAKARFWADFIDKKVIDAVCNIWK----SKGKVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWFYA 133 (161)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~~~ 133 (161)
+++++.+|+.+..+.+.+.+...+. ..+...+.....+.+.++.||..|++++|++|+++|+||+++++++.++..
T Consensus 2 ~~a~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~aDi~l~~~~~~~~~ 81 (118)
T cd03177 2 KRAIVNQRLHFDSGTLYQRLRDYYYPILFGGAEPPEEKLDKLEEALDFLETFLEGSDYVAGDQLTIADLSLVATVSTLEA 81 (118)
T ss_pred hHHHHHHHHHhhhchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHccCCeeCCCCcCHHHHHHHHHHHHHHH
Confidence 4788999999998877766544432 223456677888999999999999888999999999999999999988764
Q ss_pred -h----hhhCCCCc-hhhhhchhhhhhhCC
Q 038553 134 -V----EKFGGFKV-ENECMQRETVARILP 157 (161)
Q Consensus 134 -~----~~~~~~~~-~~~~~~rp~~~~~~~ 157 (161)
. ..+|.+.. .++|.+||++++...
T Consensus 82 ~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~ 111 (118)
T cd03177 82 LLPLDLSKYPNVRAWLERLKALPPYEEANG 111 (118)
T ss_pred hcCCChhhCchHHHHHHHHHcccchHHHHH
Confidence 2 23455554 699999999998653
No 33
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.44 E-value=4.1e-13 Score=87.49 Aligned_cols=99 Identities=18% Similarity=0.325 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhh-----hhc---C---CCchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHH
Q 038553 58 ERAKARFWADFIDKKVIDAVCNI-----WKS---K---GKVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIP 126 (161)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~---~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~ 126 (161)
+++++.+|+.|....+.+.+... +.. . +...+.....+.+.++.||++|++++|++|+++|+||+++++
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~ 81 (118)
T cd03187 2 ERAIVEQWLEVESHQFDPPASALAFELVFKPMLGLPTDEAVVEENEEKLKKVLDVYEARLSKSKYLAGDSFTLADLSHLP 81 (118)
T ss_pred chHHHHHHHHHHHhhcchhHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHHcccCcccCCCCccHHHHHHHH
Confidence 47788999999887777665432 111 1 122345677899999999999998999999999999999999
Q ss_pred HHHHHHHh------hhhCCCCc-hhhhhchhhhhhhC
Q 038553 127 LTCWFYAV------EKFGGFKV-ENECMQRETVARIL 156 (161)
Q Consensus 127 ~l~~~~~~------~~~~~~~~-~~~~~~rp~~~~~~ 156 (161)
++.+.... ..+|++.. .++|.+||++++++
T Consensus 82 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 118 (118)
T cd03187 82 YLQYLMATPFAKLFDSRPHVKAWWEDISARPAWKKVL 118 (118)
T ss_pred HHHHHHHccchhhhhcCchHHHHHHHHHhCHHHHhhC
Confidence 98776531 23555554 69999999999864
No 34
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.42 E-value=4.6e-13 Score=87.84 Aligned_cols=103 Identities=16% Similarity=0.129 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhh----cC-C----CchhhhHHHHHHHHHHHHHHhC--CCCcccCCCCChhHHhHH
Q 038553 57 SERAKARFWADFIDKKVIDAVCNIWK----SK-G----KVPGTAKNEFIEILKQLVGALG--EKDFFGGDSFGFVDVIAI 125 (161)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~----~~~~~~~~~~~~~l~~le~~L~--~~~~l~G~~~t~aD~~~~ 125 (161)
.+++++++|+.+..+.+++.+...+. .. . ...+...+.+.+.|+.||++|+ .++|++|+++|+|||+++
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~ 81 (121)
T cd03191 2 KKRARVRALALIIACDIHPLNNLRVLKYLTEELGLDEEAKNAWYRHWIARGFAALEKLLAQTAGKFCFGDEPTLADICLV 81 (121)
T ss_pred hhHHHHHHHHHHHHccCCccccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHHHH
Confidence 36889999999999888765322211 11 1 1122344668999999999997 458999999999999999
Q ss_pred HHHHHHHHh----hhhCCCCc-hhhhhchhhhhhhCCCC
Q 038553 126 PLTCWFYAV----EKFGGFKV-ENECMQRETVARILPDP 159 (161)
Q Consensus 126 ~~l~~~~~~----~~~~~~~~-~~~~~~rp~~~~~~~~~ 159 (161)
+++.+.... ..+|.+.. .+++.+||+++++++.+
T Consensus 82 ~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~ 120 (121)
T cd03191 82 PQVYNARRFGVDLSPYPTIARINEACLELPAFQAAHPDN 120 (121)
T ss_pred HHHHHHHHhCCCcccCcHHHHHHHHHHhChhHHHhCcCc
Confidence 998876533 33455544 69999999999998865
No 35
>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI
Probab=99.42 E-value=3e-13 Score=84.00 Aligned_cols=48 Identities=23% Similarity=0.310 Sum_probs=44.4
Q ss_pred CCCCCCCCChhhhhhCCCCCccceEEeCCeecccHHHHHHHHHhhCCCC
Q 038553 1 AENLFGGKSDLLLKSNPIYKKVPVLLHDGKPLCESTVIVNYIDETWPSP 49 (161)
Q Consensus 1 ~e~~~~~~~~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~~~~~~~ 49 (161)
+++|+.++++||+++||. |+||+|+++|.+++||.+|++||+++++.+
T Consensus 42 ~~vd~~~~p~~~~~~nP~-g~vPvL~~~~~~i~eS~~I~eYLde~~~~~ 89 (91)
T cd03061 42 TTVDMKRKPEDLKDLAPG-TQPPFLLYNGEVKTDNNKIEEFLEETLCPP 89 (91)
T ss_pred EEeCCCCCCHHHHHhCCC-CCCCEEEECCEEecCHHHHHHHHHHHccCC
Confidence 357889999999999998 999999999999999999999999998744
No 36
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.41 E-value=8.3e-13 Score=87.42 Aligned_cols=103 Identities=19% Similarity=0.185 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhcCCCchhhhHHHHHHHHHHHHHHhCC---CCcccCCCCChhHHhHHHHHHHHHHh
Q 038553 58 ERAKARFWADFIDKKVIDAVCNIWKSKGKVPGTAKNEFIEILKQLVGALGE---KDFFGGDSFGFVDVIAIPLTCWFYAV 134 (161)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~---~~~l~G~~~t~aD~~~~~~l~~~~~~ 134 (161)
+.+.++.+++.+.+........++...+...+...+.+.+.+..||+.|++ ++|++|+++|+||+++++++.|+...
T Consensus 3 e~~~vd~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~~~~~~~~ 82 (126)
T cd03210 3 EAALIDMVNDGVEDLRLKYVRMIYQNYEAGKDDYIKDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDLLDIHLVL 82 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHHHHHHHHh
Confidence 567778877777654433322222222233455667789999999999973 58999999999999999999887632
Q ss_pred -----hhhCCCCc-hhhhhchhhhhhhCCCCC
Q 038553 135 -----EKFGGFKV-ENECMQRETVARILPDPE 160 (161)
Q Consensus 135 -----~~~~~~~~-~~~~~~rp~~~~~~~~~~ 160 (161)
..+|++.. .++|.+||+++++++.+.
T Consensus 83 ~~~~~~~~P~l~~~~~rv~~~p~v~~~~~~~~ 114 (126)
T cd03210 83 APGCLDAFPLLKAFVERLSARPKLKAYLESDA 114 (126)
T ss_pred ChHhhhcChHHHHHHHHHHhCcHHHHHHhCcC
Confidence 34565555 699999999999998764
No 37
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.40 E-value=6.8e-13 Score=85.92 Aligned_cols=99 Identities=19% Similarity=0.211 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhh-----hcC--CCchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHH
Q 038553 58 ERAKARFWADFIDKKVIDAVCNIW-----KSK--GKVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCW 130 (161)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~ 130 (161)
+++++++|+.|.++.+.+.+...+ ... +...+.....+.+.++.+|+.|++++|++|+++|+||+++++++.+
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~ 80 (113)
T cd03178 1 ERYEVLQWLFFQMGGLGPMFGQAGHFSRYAPEKIPYAIERYTNEAKRLYGVLDKRLAGRDYLAGDEYSIADIAIFPWVRR 80 (113)
T ss_pred ChHHHHHHHHHHHccCCCcchHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHHccCCcccCCCCCeeeeeHHHHHHH
Confidence 367889999999888887754331 111 2334557788999999999999988999999999999999999988
Q ss_pred HHHh-----hhhCCCCc-hhhhhchhhhhhhC
Q 038553 131 FYAV-----EKFGGFKV-ENECMQRETVARIL 156 (161)
Q Consensus 131 ~~~~-----~~~~~~~~-~~~~~~rp~~~~~~ 156 (161)
.... ..+|.+.. .++|.+||++++++
T Consensus 81 ~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 112 (113)
T cd03178 81 LEWIGIDDLDDFPNVKRWLDRIAARPAVQRGL 112 (113)
T ss_pred HHhccccchhhchHHHHHHHHHhhCHHHHHhc
Confidence 7533 23555554 69999999999875
No 38
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.39 E-value=2.1e-12 Score=84.86 Aligned_cols=102 Identities=15% Similarity=0.249 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhc-------CCCchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHH
Q 038553 59 RAKARFWADFIDKKVIDAVCNIWKS-------KGKVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWF 131 (161)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~ 131 (161)
++++++|+.+....+.+.+...+.. .....+.....+.+.++.+|+.|++++|++|+++|+||+++++.+.+.
T Consensus 2 ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~siaDi~l~~~~~~~ 81 (123)
T cd03181 2 EAQVLQWVSFANTELLPAVAAWFLPLLGIAPYNKKSVEAALEELDRVLGVLEERLLKRTYLVGERLTLADIFVAGALLLG 81 (123)
T ss_pred hHHHHHHHHHHHhhhHHHHHHHHHHHcCccCCCHHHHHHHHHHHHHHHHHHHHHHccCceeccCCccHHHHHHHHHHHHH
Confidence 6788999999988888766544321 123356677888999999999999899999999999999999998876
Q ss_pred HHh-------hhhCCCCc-hhhhhchhhhhhhCCCCC
Q 038553 132 YAV-------EKFGGFKV-ENECMQRETVARILPDPE 160 (161)
Q Consensus 132 ~~~-------~~~~~~~~-~~~~~~rp~~~~~~~~~~ 160 (161)
... ..+|++.. .+++.++|++++++++.+
T Consensus 82 ~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~ 118 (123)
T cd03181 82 FTYVFDKEWRAKYPNVTRWFNTVVNQPIFKAVFGEVK 118 (123)
T ss_pred HHHHcCHHHHHhChHHHHHHHHHHcCHHHHHHcCCCC
Confidence 321 23555554 699999999999988753
No 39
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.39 E-value=2e-12 Score=84.50 Aligned_cols=98 Identities=20% Similarity=0.237 Sum_probs=71.8
Q ss_pred CCCHHHHHHHHHHHHHHhhhhhhhhhhh-hhc---C-----------CCchhhhHHHHHHHHHHHHHHhCCCCcccCCCC
Q 038553 53 PSCASERAKARFWADFIDKKVIDAVCNI-WKS---K-----------GKVPGTAKNEFIEILKQLVGALGEKDFFGGDSF 117 (161)
Q Consensus 53 p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~-----------~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~ 117 (161)
|.++.+++++++|+.+..+.+.+.+... +.. + ....+.....+.+.++.||++|++++|++|+++
T Consensus 2 ~~~~~~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~ 81 (119)
T cd03189 2 PPDTAEYADYLYWLHFAEGSLMPPLLLKLVLSRIGSAPPPIANKIADKVLAGFINPELKKHLDFLEDRLAKKGYFVGDKL 81 (119)
T ss_pred CCCHHHHHHHHHHHHHHhHhhhHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHhHHHHHHHHHHHHHHccCCCCCCCCC
Confidence 5678899999999999988888765432 111 1 112234556799999999999999999999999
Q ss_pred ChhHHhHHHHHHHHHHh----hhhCCCCc-hhhhhchh
Q 038553 118 GFVDVIAIPLTCWFYAV----EKFGGFKV-ENECMQRE 150 (161)
Q Consensus 118 t~aD~~~~~~l~~~~~~----~~~~~~~~-~~~~~~rp 150 (161)
|+||+++++.+.|+... ..+|++.. .+++.+||
T Consensus 82 t~ADi~l~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 82 TAADIMMSFPLEAALARGPLLEKYPNIAAYLERIEARP 119 (119)
T ss_pred CHHHHHHHHHHHHHHHcCcccccCchHHHHHHHHhcCC
Confidence 99999999988877543 23344433 46676665
No 40
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.37 E-value=3.1e-12 Score=85.88 Aligned_cols=103 Identities=11% Similarity=0.085 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhcCCCc----hhhhHHHHHHHHHHHHHHhC--CCCcccCCCCChhHHhHHHHHHHH
Q 038553 58 ERAKARFWADFIDKKVIDAVCNIWKSKGKV----PGTAKNEFIEILKQLVGALG--EKDFFGGDSFGFVDVIAIPLTCWF 131 (161)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~le~~L~--~~~~l~G~~~t~aD~~~~~~l~~~ 131 (161)
+.+.++++++.+.+.....+...+..+... .....+.+.+.|+.||++|+ +++|++|+++|+||+++++.+.++
T Consensus 3 e~a~iD~i~~~v~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~~~l~~~ 82 (137)
T cd03208 3 ERALIDMYVEGTADLMEMILMLPFLPPEEKEAKLALIKEKAKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLLEAILMV 82 (137)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHHHHHHHH
Confidence 567888888888776655544433332211 12233356799999999997 678999999999999999999887
Q ss_pred HHh-----hhhCCCCc-hhhhhchhhhhhhCCCCC
Q 038553 132 YAV-----EKFGGFKV-ENECMQRETVARILPDPE 160 (161)
Q Consensus 132 ~~~-----~~~~~~~~-~~~~~~rp~~~~~~~~~~ 160 (161)
... ..+|++.. .++|.+||++++++.++.
T Consensus 83 ~~~~~~~l~~~P~l~~~~~rv~~~P~vk~~~~~~~ 117 (137)
T cd03208 83 EELDPSLLSDFPLLQAFKTRISNLPTIKKFLQPGS 117 (137)
T ss_pred HHhchhhhccChHHHHHHHHHHcCHHHHHHHhcCC
Confidence 532 34566665 699999999999998653
No 41
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.37 E-value=2.8e-12 Score=83.46 Aligned_cols=101 Identities=12% Similarity=0.073 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhh-----hhcC--CCchhhhHHHHHHHHHHHHHHhC-CCCcccCCCCChhHHhHHHHH
Q 038553 57 SERAKARFWADFIDKKVIDAVCNI-----WKSK--GKVPGTAKNEFIEILKQLVGALG-EKDFFGGDSFGFVDVIAIPLT 128 (161)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~~l~~le~~L~-~~~~l~G~~~t~aD~~~~~~l 128 (161)
.++++++.|+.++.+.+++..... +... ....+...+.+.+.+..+|..|+ +++|++| .+|+||+++++++
T Consensus 2 ~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~l~G-~fSiAD~~l~~~~ 80 (114)
T cd03195 2 RQRARARQVQAWLRSDLLPIRVERSTEVVFAGAKAEPLSEAAQAAAEKLIAVAEALLPPGAANLFG-EWCIADTDLALML 80 (114)
T ss_pred HhhHHHHHHHHHHHhhHHHHHHhCCccceecCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCcccC-CccHHHHHHHHHH
Confidence 478999999999999998752111 1111 22456678888999999999995 5589999 5999999999999
Q ss_pred HHHHHhhhh--CCCCc-hhhhhchhhhhhhCCC
Q 038553 129 CWFYAVEKF--GGFKV-ENECMQRETVARILPD 158 (161)
Q Consensus 129 ~~~~~~~~~--~~~~~-~~~~~~rp~~~~~~~~ 158 (161)
.|....+.- |.+.. .+||.+||+++++++.
T Consensus 81 ~~~~~~g~~l~p~l~ay~~r~~~rPa~~~~~~~ 113 (114)
T cd03195 81 NRLVLNGDPVPERLRDYARRQWQRPSVQAWLAL 113 (114)
T ss_pred HHHHHcCCCCCHHHHHHHHHHHCCHHHHHHHhc
Confidence 998765421 33443 5999999999998754
No 42
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.36 E-value=8.9e-13 Score=84.10 Aligned_cols=94 Identities=17% Similarity=0.177 Sum_probs=68.6
Q ss_pred HHHHHhhhhhhhhhhhhhc-CCCchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhh---hhCCC
Q 038553 65 WADFIDKKVIDAVCNIWKS-KGKVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWFYAVE---KFGGF 140 (161)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~~~~~---~~~~~ 140 (161)
|+.|..+.+++.+...+.. .+...+.....+.+.++.+|++|++++|++|+++|+||+++++++.|....+ .+|++
T Consensus 4 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~l~g~~~t~aDi~~~~~~~~~~~~~~~~~~p~l 83 (103)
T cd03207 4 WLFFYAGVVEPALIAKAMGIEEPARMAGFGSYDDVLAALEQALAKGPYLLGERFTAADVLVGSPLGWGLQFGLLPERPAF 83 (103)
T ss_pred eeeeccccccHHHHHHHcCCCcchhhhhhhhHHHHHHHHHHHHccCCcccCCccCHHHHHHHHHHHHHHHcCCCCCChHH
Confidence 4444444454444333222 1334556678899999999999998999999999999999999998876532 34444
Q ss_pred Cc-hhhhhchhhhhhhCCC
Q 038553 141 KV-ENECMQRETVARILPD 158 (161)
Q Consensus 141 ~~-~~~~~~rp~~~~~~~~ 158 (161)
.. .+++.+||+++++++.
T Consensus 84 ~~w~~~~~~~p~~~~~~~~ 102 (103)
T cd03207 84 DAYIARITDRPAFQRAAAI 102 (103)
T ss_pred HHHHHHHHcCHHHHHHhcc
Confidence 44 6999999999998764
No 43
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.33 E-value=7.5e-12 Score=83.28 Aligned_cols=89 Identities=18% Similarity=0.285 Sum_probs=69.0
Q ss_pred hhhhhhhhhhhhcC-CCchhhhHHHHHHHHHHHHHHhCC----------------CCcccCCCCChhHHhHHHHHHHHHH
Q 038553 71 KKVIDAVCNIWKSK-GKVPGTAKNEFIEILKQLVGALGE----------------KDFFGGDSFGFVDVIAIPLTCWFYA 133 (161)
Q Consensus 71 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~le~~L~~----------------~~~l~G~~~t~aD~~~~~~l~~~~~ 133 (161)
..+.+.+..++.+. ++..+...+.+.+.|+.||++|++ ++|++|+++|+|||++++.+.++..
T Consensus 9 ~~~f~~~~~~~~~~~~~~~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~~ 88 (134)
T cd03198 9 EDIFAKFSAYIKNSNPALNENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVKV 88 (134)
T ss_pred HHHHHHHHHHHcCCChhhhHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 34555566666553 455677788999999999999976 6799999999999999999886643
Q ss_pred h----------hhhCCCCc-hhhhhchhhhhhhCCCC
Q 038553 134 V----------EKFGGFKV-ENECMQRETVARILPDP 159 (161)
Q Consensus 134 ~----------~~~~~~~~-~~~~~~rp~~~~~~~~~ 159 (161)
. ..+|++.. .++|.+||+++++++..
T Consensus 89 ~~~~~~g~~i~~~~P~L~aw~~ri~aRPsfk~t~~~~ 125 (134)
T cd03198 89 VAKKYRNFEIPADLTGLWRYLKNAYQREEFTNTCPAD 125 (134)
T ss_pred HHHhhcCCCccccCHHHHHHHHHHHCCHHHHHHcCCH
Confidence 2 23455554 59999999999998864
No 44
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.32 E-value=6.7e-12 Score=81.72 Aligned_cols=98 Identities=16% Similarity=0.243 Sum_probs=73.3
Q ss_pred CHHHHHHHHHHHHHHhhhhhhhhhhhhhc-----C--------CCchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhH
Q 038553 55 CASERAKARFWADFIDKKVIDAVCNIWKS-----K--------GKVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVD 121 (161)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--------~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD 121 (161)
++.+++++++|+.+....+.+.+...+.. + ....+.....+.+.++.||++|++++|++|+++|+||
T Consensus 1 d~~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~gd~~t~aD 80 (117)
T cd03182 1 TPLERAQIEMWQRRAELQGLYPIGQAFRHATPGLKPPDREEQVPEWGERSKARAADFLAYLDTRLAGSPYVAGDRFTIAD 80 (117)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHH
Confidence 35689999999999887777665544321 1 1224567788999999999999888999999999999
Q ss_pred HhHHHHHHHHHHhh-----hhCCCCc-hhhhhchhhh
Q 038553 122 VIAIPLTCWFYAVE-----KFGGFKV-ENECMQRETV 152 (161)
Q Consensus 122 ~~~~~~l~~~~~~~-----~~~~~~~-~~~~~~rp~~ 152 (161)
+++++.+.++...+ .+|++.. .+++.+||++
T Consensus 81 i~l~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~ 117 (117)
T cd03182 81 ITAFVGLDFAKVVKLRVPEELTHLRAWYDRMAARPSA 117 (117)
T ss_pred HHHHHHhHHHHhcCCCCccccHHHHHHHHHHHhccCC
Confidence 99999998876432 2344443 5888888863
No 45
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.31 E-value=1e-11 Score=81.50 Aligned_cols=97 Identities=23% Similarity=0.296 Sum_probs=68.1
Q ss_pred CHHHHHHHHHHHHHHhhhhhhhh-hhhhhcCCCchhhhHHHHHHHHHHHHHHhC---CCCcccCCCCChhHHhHHHHHHH
Q 038553 55 CASERAKARFWADFIDKKVIDAV-CNIWKSKGKVPGTAKNEFIEILKQLVGALG---EKDFFGGDSFGFVDVIAIPLTCW 130 (161)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~le~~L~---~~~~l~G~~~t~aD~~~~~~l~~ 130 (161)
++..++.+++|+.|... +...+ .+++.+. ..+.+.+.++.||+.|+ +++|++| ++|+||+++++++.+
T Consensus 1 d~~~ra~~~~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~l~~Le~~L~~~~~~~fl~G-~~tlADi~l~~~~~~ 72 (120)
T cd03203 1 DPAKREFADELLAYTDA-FTKALYSSLIKGD------PSAEAAAALDYIENALSKFDDGPFFLG-QFSLVDIAYVPFIER 72 (120)
T ss_pred CHHHHHHHHHHHHHHHH-HHHHHHHHHhcCC------chHHHHHHHHHHHHHHHhcCCCCCcCC-CccHHHHHHHHHHHH
Confidence 35678999999998333 33222 3333221 13345677888888886 4899999 999999999999876
Q ss_pred HHH-----h-----hhhCCCCc-hhhhhchhhhhhhCCCC
Q 038553 131 FYA-----V-----EKFGGFKV-ENECMQRETVARILPDP 159 (161)
Q Consensus 131 ~~~-----~-----~~~~~~~~-~~~~~~rp~~~~~~~~~ 159 (161)
+.. . ..+|++.. .++|.+||+++++.++.
T Consensus 73 ~~~~~~~~~~~~~~~~~P~l~~W~~~~~~rp~~~~~~~~~ 112 (120)
T cd03203 73 FQIFLSELFNYDITEGRPNLAAWIEEMNKIEAYTQTKQDP 112 (120)
T ss_pred HHHHHHHhcCccccccCcHHHHHHHHHhcchHHHhHcCCH
Confidence 642 1 23455544 59999999999999864
No 46
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.31 E-value=4.3e-12 Score=83.45 Aligned_cols=71 Identities=18% Similarity=0.287 Sum_probs=57.2
Q ss_pred hhhHHHHHHHHHHHHHHhCC-CCcccCCCCChhHHhHHHHHHHHHHh----------hhhCCCCc-hhhhhchhhhhhhC
Q 038553 89 GTAKNEFIEILKQLVGALGE-KDFFGGDSFGFVDVIAIPLTCWFYAV----------EKFGGFKV-ENECMQRETVARIL 156 (161)
Q Consensus 89 ~~~~~~~~~~l~~le~~L~~-~~~l~G~~~t~aD~~~~~~l~~~~~~----------~~~~~~~~-~~~~~~rp~~~~~~ 156 (161)
++..+.+.+.|..||+.|++ ++|++|+++|+||+++++++.++... ..+|++.. .++|.+||++++++
T Consensus 29 ~~~~~~l~~~l~~Le~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~P~l~~w~~rl~~rps~~~t~ 108 (121)
T cd03201 29 DGTEQALLDELEALEDHLKENGPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSVPESLTSVKSYMKALFSRESFVKTK 108 (121)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHHHHHHCCchhhhcC
Confidence 55677899999999999984 79999999999999999987666532 22334443 59999999999998
Q ss_pred CCC
Q 038553 157 PDP 159 (161)
Q Consensus 157 ~~~ 159 (161)
+..
T Consensus 109 ~~~ 111 (121)
T cd03201 109 AEK 111 (121)
T ss_pred CCH
Confidence 864
No 47
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.30 E-value=8.2e-11 Score=82.02 Aligned_cols=115 Identities=17% Similarity=0.226 Sum_probs=91.4
Q ss_pred hCCCCCccceEEeCCeecccHHHHHHHHHhhCCCCCCCC-CCHHHHHHHHHHHHHHhhhhhhhhhh--------------
Q 038553 15 SNPIYKKVPVLLHDGKPLCESTVIVNYIDETWPSPPLLP-SCASERAKARFWADFIDKKVIDAVCN-------------- 79 (161)
Q Consensus 15 ~np~~~~vP~L~~~~~~l~eS~~I~~yl~~~~~~~~l~p-~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 79 (161)
++|- |+||.|..|..+++|-.+|+.+++.+-- .|-. .+..+++.++.+++.+...+..+=..
T Consensus 62 mSP~-G~vPllr~g~~~~aef~pIV~fVeak~~--~l~s~lsE~qkadmra~vslVen~~t~aEl~~s~~de~ty~~vT~ 138 (257)
T KOG3027|consen 62 MSPG-GKVPLLRIGKTLFAEFEPIVDFVEAKGV--TLTSWLSEDQKADMRAYVSLVENLLTTAELYVSWNDEETYDEVTA 138 (257)
T ss_pred cCCC-CCCceeeecchhhhhhhHHHHHHHHhcc--chhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhh
Confidence 6896 9999999999999999999999999843 3332 24558889999888888766544100
Q ss_pred ----------------hh------------hcCCCchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHH
Q 038553 80 ----------------IW------------KSKGKVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWF 131 (161)
Q Consensus 80 ----------------~~------------~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~ 131 (161)
+. ..+....+++.+++.++++.|+.+|+.++||.|++||-+|+.+|+++..+
T Consensus 139 ~R~gs~ypWPLs~i~~f~Krr~~~r~lk~~~W~~~~~DqVie~vdkc~~aLsa~L~~q~yf~g~~P~elDAlvFGHlyti 218 (257)
T KOG3027|consen 139 LRYGSVYPWPLSHILPFVKRRKALRELKVYDWDDKTMDQVIEQVDKCCRALSAQLGSQPYFTGDQPTELDALVFGHLYTI 218 (257)
T ss_pred hccCCCCCCcHHHHHHHHHHHHHHHHHhhcCcccccHHHHHHHHHHHHHHHHHHhcCCCccCCCCccHHHHHHHhhhHHh
Confidence 00 01134568899999999999999999999999999999999999998665
Q ss_pred H
Q 038553 132 Y 132 (161)
Q Consensus 132 ~ 132 (161)
.
T Consensus 219 l 219 (257)
T KOG3027|consen 219 L 219 (257)
T ss_pred h
Confidence 4
No 48
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.30 E-value=9.6e-12 Score=79.94 Aligned_cols=95 Identities=16% Similarity=0.251 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhh----cC-C----CchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHH
Q 038553 58 ERAKARFWADFIDKKVIDAVCNIWK----SK-G----KVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLT 128 (161)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~----~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l 128 (161)
+++++++|+.+..+.+.+.+...+. .. . ...+...+.+.+.++.+|++|++++|++|+++|+||+++++++
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lE~~L~~~~~l~g~~~t~aDi~~~~~~ 81 (110)
T cd03180 2 ARARADRWMDWQTSTLNPAFRYAFWGLVRTPPEQRDPAAIAASLAAWAKLMAILDAQLAGRPYLAGDRFTLADIPLGCSA 81 (110)
T ss_pred chhHHHHHHHHHHhhcChHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHH
Confidence 4788999999998888887654422 11 1 1234567789999999999999899999999999999999887
Q ss_pred H-HHHH---hhhhCCCCc-hhhhhchhhh
Q 038553 129 C-WFYA---VEKFGGFKV-ENECMQRETV 152 (161)
Q Consensus 129 ~-~~~~---~~~~~~~~~-~~~~~~rp~~ 152 (161)
. +... ...+|.+.. .++|.+||++
T Consensus 82 ~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 82 YRWFELPIERPPLPHLERWYARLRARPAF 110 (110)
T ss_pred HHHHHcccccccCchHHHHHHHHHhCCCC
Confidence 4 3321 133455554 5888888874
No 49
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.29 E-value=1.4e-12 Score=93.64 Aligned_cols=134 Identities=20% Similarity=0.256 Sum_probs=101.8
Q ss_pred ccceEEeCC---eecccHHHHHHHHHhhC---------CCCCCCCCCHHHHHHHHHHHHHHhhhhhhhhhhh-hhcCCCc
Q 038553 21 KVPVLLHDG---KPLCESTVIVNYIDETW---------PSPPLLPSCASERAKARFWADFIDKKVIDAVCNI-WKSKGKV 87 (161)
Q Consensus 21 ~vP~L~~~~---~~l~eS~~I~~yl~~~~---------~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 87 (161)
+||+|.|-. .+-+||..|++.+...| +.-.|+|.+ -+++++.+..|+.+.+...+... +...++.
T Consensus 123 TVPVLWD~k~ktIVnNES~eIIr~fNs~f~ef~~~~e~~~lDL~P~~--L~~~Ide~N~wvy~~INNGVYk~GFA~~~e~ 200 (319)
T KOG2903|consen 123 TVPVLWDLKTKTIVNNESSEIIRMFNSAFDEFNGIAENPVLDLYPSS--LRAQIDETNSWVYDKINNGVYKCGFAEKQEA 200 (319)
T ss_pred EEEEEEccccceeecCchHHHHHHHhhhhhhhhccccCCccccCCHH--HHHHHhhhhceecccccCceeeeccccccch
Confidence 799999743 44579999999999333 234678765 78899999999999888776555 3345778
Q ss_pred hhhhHHHHHHHHHHHHHHhCCCC--cccCCCCChhHHhHHHHHHHHHHh-------------hhhCCCCc-hhhhhc-hh
Q 038553 88 PGTAKNEFIEILKQLVGALGEKD--FFGGDSFGFVDVIAIPLTCWFYAV-------------EKFGGFKV-ENECMQ-RE 150 (161)
Q Consensus 88 ~~~~~~~~~~~l~~le~~L~~~~--~l~G~~~t~aD~~~~~~l~~~~~~-------------~~~~~~~~-~~~~~~-rp 150 (161)
.+....++.+.|+.+|..|+.+. |++|+++|.||+.+|+.+-++... ..||++-. .+.+.+ .|
T Consensus 201 Ye~~V~~lfe~LDr~E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~~~ir~~Yp~l~~~lk~iY~~~~ 280 (319)
T KOG2903|consen 201 YEEEVNQLFEALDRCEDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNKKTIRDEYPNLHNWLKNIYWNIP 280 (319)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccceEeeccccchhheeeeeeEEeehhhhheeeecchhhhhccCcHHHHHHHHHHhhcc
Confidence 88999999999999999998866 999999999999999988666531 13444433 355555 77
Q ss_pred hhhhhC
Q 038553 151 TVARIL 156 (161)
Q Consensus 151 ~~~~~~ 156 (161)
+|+.+.
T Consensus 281 ~~~~Tt 286 (319)
T KOG2903|consen 281 GFSSTT 286 (319)
T ss_pred chhhcc
Confidence 776654
No 50
>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A ....
Probab=99.29 E-value=4.7e-12 Score=76.32 Aligned_cols=47 Identities=40% Similarity=0.644 Sum_probs=43.1
Q ss_pred CCCCCCCChhhhhhCCCCCccceEEeCCeecccHHHHHHHHHhhCCCC
Q 038553 2 ENLFGGKSDLLLKSNPIYKKVPVLLHDGKPLCESTVIVNYIDETWPSP 49 (161)
Q Consensus 2 e~~~~~~~~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~~~~~~~ 49 (161)
++++..++++|.++||. ++||+|++||.+++||.+|++||+++|+++
T Consensus 28 ~v~~~~~~~~~~~~~p~-~~vPvL~~~g~~l~dS~~I~~yL~~~~~~~ 74 (75)
T PF13417_consen 28 PVDPEEKRPEFLKLNPK-GKVPVLVDDGEVLTDSAAIIEYLEERYPGP 74 (75)
T ss_dssp EEBTTSTSHHHHHHSTT-SBSSEEEETTEEEESHHHHHHHHHHHSTSS
T ss_pred ccCcccchhHHHhhccc-ccceEEEECCEEEeCHHHHHHHHHHHcCCC
Confidence 45677789999999998 999999999999999999999999999864
No 51
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.27 E-value=1.8e-11 Score=77.29 Aligned_cols=76 Identities=16% Similarity=0.260 Sum_probs=62.1
Q ss_pred HHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCCchhhhHHHHHHHHHHHHHHhCCCCcccCCCCC
Q 038553 39 VNYIDETWPSPPLLPSCASERAKARFWADFIDKKVIDAVCNIWKSKGKVPGTAKNEFIEILKQLVGALGEKDFFGGDSFG 118 (161)
Q Consensus 39 ~~yl~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t 118 (161)
++||++..+ ++|.++.+.++++.|++.....+.. ...+.+.+.++.+|++|++++|++|+++|
T Consensus 1 ~r~~~~~~~---~~~~~~~~~~~vd~~~d~~~~~l~~--------------~~~~~~~~~l~~le~~L~~~~fl~Gd~~t 63 (96)
T cd03200 1 ARFLYRLLG---PAPNAPNAATNIDSWVDTAIFQLAE--------------GSSKEKAAVLRALNSALGRSPWLVGSEFT 63 (96)
T ss_pred CchHHHHhc---ccCCCchHHHHHHHHHHHHHHHHhc--------------CCHHHHHHHHHHHHHHHcCCCccCCCCCC
Confidence 478888843 8999999999999999976633321 13566678899999999999999999999
Q ss_pred hhHHhHHHHHHHH
Q 038553 119 FVDVIAIPLTCWF 131 (161)
Q Consensus 119 ~aD~~~~~~l~~~ 131 (161)
+|||++++.+.+.
T Consensus 64 iADi~l~~~l~~~ 76 (96)
T cd03200 64 VADIVSWCALLQT 76 (96)
T ss_pred HHHHHHHHHHHHc
Confidence 9999999887653
No 52
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.25 E-value=1.4e-11 Score=81.36 Aligned_cols=99 Identities=16% Similarity=0.143 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhh---------hcC---CCchhhhHHHHHHHHHHHHHH-hCCCCcccCCCCChhHHhHH
Q 038553 59 RAKARFWADFIDKKVIDAVCNIW---------KSK---GKVPGTAKNEFIEILKQLVGA-LGEKDFFGGDSFGFVDVIAI 125 (161)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~---------~~~---~~~~~~~~~~~~~~l~~le~~-L~~~~~l~G~~~t~aD~~~~ 125 (161)
++++++|+.|..+.+.+.+...+ ... +...+...+.+.+.++.+|++ +++++|++|+++|+||++++
T Consensus 2 ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~l~Gd~~t~ADi~l~ 81 (126)
T cd03183 2 RARVDEYLAWQHTNLRLGCAKYFWQKVLLPLLGGKPVSPEKVKKAEENLEESLDLLENYFLKDKPFLAGDEISIADLSAV 81 (126)
T ss_pred cccHHHHHHHHHhhhHhhHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHH
Confidence 45678888888777665443211 111 223445667789999999997 55578999999999999999
Q ss_pred HHHHHHHHh-----hhhCCCCc-hhhhhc--hhhhhhhCC
Q 038553 126 PLTCWFYAV-----EKFGGFKV-ENECMQ--RETVARILP 157 (161)
Q Consensus 126 ~~l~~~~~~-----~~~~~~~~-~~~~~~--rp~~~~~~~ 157 (161)
+.+.+.... ..+|++.. .++|.+ ||++++++.
T Consensus 82 ~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~~~p~~~~~~~ 121 (126)
T cd03183 82 CEIMQPEAAGYDVFEGRPKLAAWRKRVKEAGNPLFDEAHK 121 (126)
T ss_pred HHHHHHHhcCCcccccCchHHHHHHHHHHhcchhHHHHHH
Confidence 988776533 23455544 699999 999998753
No 53
>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.21 E-value=2e-11 Score=72.96 Aligned_cols=44 Identities=30% Similarity=0.436 Sum_probs=40.4
Q ss_pred CCCCCCCChhhhhhCCCCCccceEEeCCeecccHHHHHHHHHhhC
Q 038553 2 ENLFGGKSDLLLKSNPIYKKVPVLLHDGKPLCESTVIVNYIDETW 46 (161)
Q Consensus 2 e~~~~~~~~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~~~~ 46 (161)
++++.+++++|+++||. |+||+|++||..++||.+|++||+++|
T Consensus 30 ~v~~~~~~~~~~~~~p~-~~vP~l~~~~~~l~es~aI~~yL~~~~ 73 (73)
T cd03059 30 DVDPDNPPEDLAELNPY-GTVPTLVDRDLVLYESRIIMEYLDERF 73 (73)
T ss_pred EcCCCCCCHHHHhhCCC-CCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 46777888999999999 999999999999999999999999875
No 54
>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.20 E-value=1.4e-11 Score=73.90 Aligned_cols=37 Identities=30% Similarity=0.724 Sum_probs=34.5
Q ss_pred CCCChhhhhhCCCCCccceEEeCCeecccHHHHHHHHH
Q 038553 6 GGKSDLLLKSNPIYKKVPVLLHDGKPLCESTVIVNYID 43 (161)
Q Consensus 6 ~~~~~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~ 43 (161)
+++++||+++||. |+||+|++||.+++||.+|++||+
T Consensus 37 ~~~~~~~~~inP~-g~vP~L~~~g~~l~Es~aI~~yLe 73 (73)
T cd03052 37 EHNEPWFMRLNPT-GEVPVLIHGDNIICDPTQIIDYLE 73 (73)
T ss_pred ccCCHHHHHhCcC-CCCCEEEECCEEEEcHHHHHHHhC
Confidence 4578899999999 999999999999999999999985
No 55
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.16 E-value=3e-11 Score=76.66 Aligned_cols=66 Identities=18% Similarity=0.194 Sum_probs=53.6
Q ss_pred chhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHH----hhhhCCCCc-hhhhhchhhh
Q 038553 87 VPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWFYA----VEKFGGFKV-ENECMQRETV 152 (161)
Q Consensus 87 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~~~----~~~~~~~~~-~~~~~~rp~~ 152 (161)
..+....++.+.++.+|++|++++|++|+++|+||+++++++.+... ...+|++.. .++|.+||++
T Consensus 30 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 100 (100)
T cd03206 30 DKETAIARAHRLLRLLEEHLAGRDWLAGDRPTIADVAVYPYVALAPEGGVDLEDYPAIRRWLARIEALPGF 100 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCccCCCCCCHHHHHHHHHHHHHhccCCChhhCcHHHHHHHHHHhCcCC
Confidence 45667889999999999999999999999999999999998876442 134566655 6889988874
No 56
>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb
Probab=99.15 E-value=4.8e-11 Score=71.83 Aligned_cols=41 Identities=34% Similarity=0.491 Sum_probs=38.1
Q ss_pred CCCChhhhhhCCCCCccceEEeCCeecccHHHHHHHHHhhCC
Q 038553 6 GGKSDLLLKSNPIYKKVPVLLHDGKPLCESTVIVNYIDETWP 47 (161)
Q Consensus 6 ~~~~~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~~~~~ 47 (161)
+.++++|+++||. ++||+|+++|..++||.+|++||++++|
T Consensus 36 ~~~~~~~~~~~p~-~~vP~l~~~g~~l~es~aI~~yL~~~~~ 76 (76)
T cd03046 36 EQAPPEYLAINPL-GKVPVLVDGDLVLTESAAIILYLAEKYG 76 (76)
T ss_pred ccCCHHHHhcCCC-CCCCEEEECCEEEEcHHHHHHHHHHhCc
Confidence 4678999999999 9999999999999999999999999875
No 57
>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.
Probab=99.14 E-value=6.8e-11 Score=71.47 Aligned_cols=40 Identities=38% Similarity=0.588 Sum_probs=36.7
Q ss_pred CCChhhhhhCCCCCccceEEeC-CeecccHHHHHHHHHhhCC
Q 038553 7 GKSDLLLKSNPIYKKVPVLLHD-GKPLCESTVIVNYIDETWP 47 (161)
Q Consensus 7 ~~~~~~~~~np~~~~vP~L~~~-~~~l~eS~~I~~yl~~~~~ 47 (161)
+++++|+++||. +++|+|+++ |..++||.+|++||+++||
T Consensus 37 ~~~~~~~~~np~-~~vP~l~~~~g~~l~eS~aI~~yL~~~~p 77 (77)
T cd03057 37 QKGADYLAINPK-GQVPALVLDDGEVLTESAAILQYLADLHP 77 (77)
T ss_pred cCCHhHHHhCCC-CCCCEEEECCCcEEEcHHHHHHHHHHhCc
Confidence 468999999998 999999976 8999999999999999875
No 58
>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,
Probab=99.13 E-value=6.9e-11 Score=70.91 Aligned_cols=44 Identities=68% Similarity=1.209 Sum_probs=39.2
Q ss_pred CCCCCCCChhhhhhCC-CCCccceEEeCCeecccHHHHHHHHHhhC
Q 038553 2 ENLFGGKSDLLLKSNP-IYKKVPVLLHDGKPLCESTVIVNYIDETW 46 (161)
Q Consensus 2 e~~~~~~~~~~~~~np-~~~~vP~L~~~~~~l~eS~~I~~yl~~~~ 46 (161)
++++..++++|+++|| . |+||+|+++|.+++||.+|++||++++
T Consensus 30 ~~~~~~~~~~~~~~~p~~-~~vP~l~~~~~~l~eS~aI~~yL~~~~ 74 (74)
T cd03058 30 EEDLGNKSELLLASNPVH-KKIPVLLHNGKPICESLIIVEYIDEAW 74 (74)
T ss_pred EeCcccCCHHHHHhCCCC-CCCCEEEECCEEeehHHHHHHHHHhhC
Confidence 3566778899999999 5 899999999999999999999999864
No 59
>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and
Probab=99.12 E-value=7.1e-11 Score=72.09 Aligned_cols=40 Identities=28% Similarity=0.459 Sum_probs=37.1
Q ss_pred CCChhhhhhCCCCCccceEEeC---CeecccHHHHHHHHHhhCC
Q 038553 7 GKSDLLLKSNPIYKKVPVLLHD---GKPLCESTVIVNYIDETWP 47 (161)
Q Consensus 7 ~~~~~~~~~np~~~~vP~L~~~---~~~l~eS~~I~~yl~~~~~ 47 (161)
.++++|+++||. ++||+|+++ |..|+||.+|++||+++++
T Consensus 38 ~~~~~~~~~~p~-~~vP~l~~~~~~g~~l~eS~aI~~yL~~~~~ 80 (81)
T cd03048 38 QKKPEFLKINPN-GRIPAIVDHNGTPLTVFESGAILLYLAEKYD 80 (81)
T ss_pred ccCHHHHHhCcC-CCCCEEEeCCCCceEEEcHHHHHHHHHHHhC
Confidence 577999999998 999999976 8999999999999999886
No 60
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.12 E-value=3.8e-10 Score=73.42 Aligned_cols=70 Identities=13% Similarity=0.197 Sum_probs=53.3
Q ss_pred chhhhHHHHHHHHHHHHHHh---CCCCcccCCCCChhHHhHHHHHHHHHHhhh--hCCCCc-hhhhhchhhhhhhCC
Q 038553 87 VPGTAKNEFIEILKQLVGAL---GEKDFFGGDSFGFVDVIAIPLTCWFYAVEK--FGGFKV-ENECMQRETVARILP 157 (161)
Q Consensus 87 ~~~~~~~~~~~~l~~le~~L---~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~--~~~~~~-~~~~~~rp~~~~~~~ 157 (161)
..+...+.+.+.++.+|..| ++++|++|+ +|+||+++++++.|....+. .|++.. .+++.+||++++++.
T Consensus 38 ~~~~~~~~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~~~~~~~~~P~l~~~~~rv~~rPsv~~~~~ 113 (114)
T cd03194 38 LSEAVQADIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVVTRFRTYGLPLSPAAQAYVDALLAHPAMQEWIA 113 (114)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHCCHHHHHHHh
Confidence 34556666777777777766 467899999 99999999999988765431 244444 699999999999875
No 61
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.11 E-value=2.1e-10 Score=67.76 Aligned_cols=65 Identities=15% Similarity=0.122 Sum_probs=49.5
Q ss_pred chhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhhhhCCCCchhhhhchhhhhhhC
Q 038553 87 VPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWFYAVEKFGGFKVENECMQRETVARIL 156 (161)
Q Consensus 87 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~~~~~~~~~~~~~rp~~~~~~ 156 (161)
..++..+.+.+.++.||++|++++|++|++||+||+++++++.++........+ ....|.+++++
T Consensus 3 ~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~~~~~~~-----~~~~p~l~~w~ 67 (69)
T PF13410_consen 3 AVERARAQLEAALDALEDHLADGPFLFGDRPSLADIALAPFLWRLRFVGPDFDL-----LEAYPNLRAWY 67 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSSBTTBSS--HHHHHHHHHHHHHHHCTHTCCH-----HTTSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHhCcCcCc-----cccCHHHHHHH
Confidence 356788899999999999999999999999999999999999998875321111 25666666553
No 62
>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B ....
Probab=99.10 E-value=1.5e-10 Score=68.76 Aligned_cols=41 Identities=39% Similarity=0.529 Sum_probs=35.5
Q ss_pred CCCCCChhhhhhCCCCCccceEEe-CCeecccHHHHHHHHHhh
Q 038553 4 LFGGKSDLLLKSNPIYKKVPVLLH-DGKPLCESTVIVNYIDET 45 (161)
Q Consensus 4 ~~~~~~~~~~~~np~~~~vP~L~~-~~~~l~eS~~I~~yl~~~ 45 (161)
+...++++|.++||. |+||+|++ +|.+++||.+|++||+++
T Consensus 29 ~~~~~~~~~~~~~p~-~~VP~L~~~~g~vi~eS~~I~~yL~~~ 70 (70)
T PF13409_consen 29 KGEQKPPEFLALNPR-GKVPVLVDPDGTVINESLAILEYLEEQ 70 (70)
T ss_dssp TBCTTCHBHHHHSTT--SSSEEEETTTEEEESHHHHHHHHHHT
T ss_pred CccccChhhhccCcC-eEEEEEEECCCCEeeCHHHHHHHHhcC
Confidence 345677999999999 99999996 889999999999999874
No 63
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=99.10 E-value=1.5e-09 Score=78.53 Aligned_cols=121 Identities=18% Similarity=0.258 Sum_probs=86.7
Q ss_pred hhhhhhCCCCCccceEEeCCeecccHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHhhhhhhh-------------
Q 038553 10 DLLLKSNPIYKKVPVLLHDGKPLCESTVIVNYIDETWPSPPLLPSCASERAKARFWADFIDKKVIDA------------- 76 (161)
Q Consensus 10 ~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~------------- 76 (161)
.++...+.. |++|.++-+|.-+.||..|..+|.++++=+... .+.++++.+.+...+...+.-.
T Consensus 83 ~~~~~rSr~-G~lPFIELNGe~iaDS~~I~~~L~~hf~~~~~L--~~e~~a~s~Al~rm~dnhL~~~l~y~k~~~~~~~~ 159 (281)
T KOG4244|consen 83 CSLKRRSRN-GTLPFIELNGEHIADSDLIEDRLRKHFKIPDDL--SAEQRAQSRALSRMADNHLFWILLYYKGADDAWLN 159 (281)
T ss_pred ccceeeccC-CCcceEEeCCeeccccHHHHHHHHHHcCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHH
Confidence 344456787 999999999999999999999999999833213 3445666665555444332221
Q ss_pred ---------------hhhhh-----hcC----------CCchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHH
Q 038553 77 ---------------VCNIW-----KSK----------GKVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIP 126 (161)
Q Consensus 77 ---------------~~~~~-----~~~----------~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~ 126 (161)
+.+++ ... ....++..+.+.+.|+.++..|++++||+|+++|-+|+.+|+
T Consensus 160 ~~~~~~~l~~~l~~~l~~~~~~~~f~~kv~~r~~g~IG~f~~~Ei~ell~rDlr~i~~~Lg~KkflfGdkit~~DatvFg 239 (281)
T KOG4244|consen 160 TDRKLIGLPGFLFPLLLPLFWKAIFGKKVYKRSTGAIGDFESAEIDELLHRDLRAISDYLGDKKFLFGDKITPADATVFG 239 (281)
T ss_pred HHHhccCccccchHHHHHHHHHHHHHHHHHHHhhccccCcCHHHHHHHHHHHHHHHHHHhCCCccccCCCCCcceeeehh
Confidence 11111 000 123455777789999999999999999999999999999999
Q ss_pred HHHHHHH
Q 038553 127 LTCWFYA 133 (161)
Q Consensus 127 ~l~~~~~ 133 (161)
.|..+..
T Consensus 240 qLa~v~Y 246 (281)
T KOG4244|consen 240 QLAQVYY 246 (281)
T ss_pred hhhheec
Confidence 9977653
No 64
>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC
Probab=99.08 E-value=2.1e-10 Score=69.17 Aligned_cols=39 Identities=28% Similarity=0.468 Sum_probs=35.6
Q ss_pred CCChhhhhhCCCCCccceEEeCCeecccHHHHHHHHHhhC
Q 038553 7 GKSDLLLKSNPIYKKVPVLLHDGKPLCESTVIVNYIDETW 46 (161)
Q Consensus 7 ~~~~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~~~~ 46 (161)
.+.++|.++||. |+||+|+++|.+++||.+|++||+++|
T Consensus 38 ~~~~~~~~~~p~-~~vP~L~~~~~~l~eS~aI~~Yl~~~~ 76 (76)
T cd03050 38 QLTPEFKKINPF-GKVPAIVDGDFTLAESVAILRYLARKF 76 (76)
T ss_pred cCCHHHHHhCcC-CCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 356799999999 999999999999999999999999875
No 65
>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w
Probab=99.07 E-value=6.7e-11 Score=70.86 Aligned_cols=42 Identities=12% Similarity=0.155 Sum_probs=36.2
Q ss_pred CCCCCCChhhhhhCCCCCccceEEeCCeecccHHHHHHHHHhh
Q 038553 3 NLFGGKSDLLLKSNPIYKKVPVLLHDGKPLCESTVIVNYIDET 45 (161)
Q Consensus 3 ~~~~~~~~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~~~ 45 (161)
+++....++|+++||. |+||+|++||..++||.+|++||+++
T Consensus 32 v~~~~~~~~~~~~~p~-~~vP~l~~~~~~l~es~aI~~yL~~~ 73 (73)
T cd03076 32 VTYEEWQESLKPKMLF-GQLPCFKDGDLTLVQSNAILRHLGRK 73 (73)
T ss_pred ecHHHhhhhhhccCCC-CCCCEEEECCEEEEcHHHHHHHHhcC
Confidence 3444456789999999 99999999999999999999999863
No 66
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.07 E-value=1.6e-10 Score=72.41 Aligned_cols=65 Identities=18% Similarity=0.319 Sum_probs=51.8
Q ss_pred CchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhhh------hCCCCc-hhhhhchh
Q 038553 86 KVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWFYAVEK------FGGFKV-ENECMQRE 150 (161)
Q Consensus 86 ~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~------~~~~~~-~~~~~~rp 150 (161)
...+.....+.+.++.+|..|++++|++|+++|+||+++++++.++...+. +|++.. .++|.+||
T Consensus 24 ~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 24 EMVEEARAKVPRYLEVLEKRLKGGPYLVGDKLTIADIALFPMLDWLERLGPDFLFEKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHHTTTTTHTTSHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCeeeccCCchhHHHHHHHHHHHHHhCCCcccccCHHHHHHHHHHHcCC
Confidence 356778888999999999999999999999999999999999998876532 333333 57777776
No 67
>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot
Probab=99.05 E-value=2e-10 Score=69.16 Aligned_cols=41 Identities=37% Similarity=0.456 Sum_probs=35.9
Q ss_pred CCCC--CCChhhhhhCCCCCccceEEe-CCeecccHHHHHHHHHh
Q 038553 3 NLFG--GKSDLLLKSNPIYKKVPVLLH-DGKPLCESTVIVNYIDE 44 (161)
Q Consensus 3 ~~~~--~~~~~~~~~np~~~~vP~L~~-~~~~l~eS~~I~~yl~~ 44 (161)
+++. +++++|+++||. |++|+|++ +|.+++||.+|++||++
T Consensus 31 v~~~~~~~~~~~~~~nP~-~~vP~L~~~~g~~l~es~aI~~yL~~ 74 (75)
T cd03044 31 FQPGKENKTPEFLKKFPL-GKVPAFEGADGFCLFESNAIAYYVAN 74 (75)
T ss_pred cccccccCCHHHHHhCCC-CCCCEEEcCCCCEEeeHHHHHHHHhh
Confidence 4443 678999999999 99999995 68899999999999976
No 68
>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t
Probab=99.04 E-value=2.5e-10 Score=68.73 Aligned_cols=38 Identities=34% Similarity=0.456 Sum_probs=35.2
Q ss_pred CCChhhhhhCCCCCccceEEeCCeecccHHHHHHHHHhh
Q 038553 7 GKSDLLLKSNPIYKKVPVLLHDGKPLCESTVIVNYIDET 45 (161)
Q Consensus 7 ~~~~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~~~ 45 (161)
+++++|.++||. |+||+|+++|..++||.+|++||+++
T Consensus 39 ~~~~~~~~~~P~-~~vP~l~~~g~~l~es~aI~~yL~~~ 76 (76)
T cd03053 39 HKSPEHLARNPF-GQIPALEDGDLKLFESRAITRYLAEK 76 (76)
T ss_pred cCCHHHHhhCCC-CCCCEEEECCEEEEcHHHHHHHHhhC
Confidence 567899999998 99999999999999999999999864
No 69
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.03 E-value=3.7e-10 Score=72.92 Aligned_cols=67 Identities=18% Similarity=0.197 Sum_probs=53.9
Q ss_pred CchhhhHHHHHHHHHHHHHHhCCC----------CcccCCCCChhHHhHHHHHHHHHHhh---------hhCCCCc-hhh
Q 038553 86 KVPGTAKNEFIEILKQLVGALGEK----------DFFGGDSFGFVDVIAIPLTCWFYAVE---------KFGGFKV-ENE 145 (161)
Q Consensus 86 ~~~~~~~~~~~~~l~~le~~L~~~----------~~l~G~~~t~aD~~~~~~l~~~~~~~---------~~~~~~~-~~~ 145 (161)
...+.....+.+.++.+|++|.++ +|++|+++|+||+++++.+.|+...+ .+|++.. .++
T Consensus 25 ~~i~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~P~l~~w~~r 104 (111)
T cd03204 25 EYLKKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFLGLSRRYWGNGKRPNLEAYFER 104 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHcCccccccccccChHHHHHHHH
Confidence 345678889999999999999754 49999999999999999998876431 3555554 689
Q ss_pred hhchhhh
Q 038553 146 CMQRETV 152 (161)
Q Consensus 146 ~~~rp~~ 152 (161)
|.+||+|
T Consensus 105 v~aRpsf 111 (111)
T cd03204 105 VLQRESF 111 (111)
T ss_pred HHcCCCC
Confidence 9999875
No 70
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=99.03 E-value=2.6e-09 Score=68.12 Aligned_cols=100 Identities=14% Similarity=0.141 Sum_probs=70.0
Q ss_pred CHHHHHHHHHHHHHHhhhhhhhhh-----hhhhcC--CCchhhhHHHHHHHHHHHHHHhCC-CCcccCCCCChhHHhHHH
Q 038553 55 CASERAKARFWADFIDKKVIDAVC-----NIWKSK--GKVPGTAKNEFIEILKQLVGALGE-KDFFGGDSFGFVDVIAIP 126 (161)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~--~~~~~~~~~~~~~~l~~le~~L~~-~~~l~G~~~t~aD~~~~~ 126 (161)
|..+|++.+++..|+.+.|.+.-. -++.+. ....+.....+.+.+...+.+|+. ++||+|+ +||||..+++
T Consensus 1 D~~~RArAR~vqAwlrSdf~~lR~Erpt~vvf~~~~~~pLs~~a~~~a~kL~~~a~~ll~~g~~~LFGe-wsIAD~dlA~ 79 (117)
T PF14834_consen 1 DRQERARARQVQAWLRSDFMALRQERPTNVVFRGARKPPLSEAAQAAAQKLIAVAERLLADGGPNLFGE-WSIADADLAL 79 (117)
T ss_dssp SHHHHHHHHHHHHHHHHS-HHHHHHS-THHHHS--------HHHHHHHHHHHHHHHHHTTT--SSTTSS---HHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcccHHHHhhCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhccCCCCcccc-chHHHHHHHH
Confidence 356899999999999999887632 222222 445678888899999999999865 7899997 9999999999
Q ss_pred HHHHHHHhhhhCCCCc-----hhhhhchhhhhhhCC
Q 038553 127 LTCWFYAVEKFGGFKV-----ENECMQRETVARILP 157 (161)
Q Consensus 127 ~l~~~~~~~~~~~~~~-----~~~~~~rp~~~~~~~ 157 (161)
++.++...+. .++. .++..+||++|+++.
T Consensus 80 ml~Rl~~~gd--~vP~~l~~Ya~~qwqrpsVQ~Wla 113 (117)
T PF14834_consen 80 MLNRLVTYGD--PVPERLADYAERQWQRPSVQRWLA 113 (117)
T ss_dssp HHHHHHTTT------HHHHHHHHHHHT-HHHHHHHH
T ss_pred HHHHHHHcCC--CCCHHHHHHHHHHHCCHHHHHHHH
Confidence 9999987553 2332 378999999999864
No 71
>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r
Probab=99.03 E-value=2.6e-10 Score=67.86 Aligned_cols=40 Identities=30% Similarity=0.412 Sum_probs=36.1
Q ss_pred CCCCCCCChhhhhhCCCCCccceEEe-CCeecccHHHHHHHH
Q 038553 2 ENLFGGKSDLLLKSNPIYKKVPVLLH-DGKPLCESTVIVNYI 42 (161)
Q Consensus 2 e~~~~~~~~~~~~~np~~~~vP~L~~-~~~~l~eS~~I~~yl 42 (161)
++++..++++|+++||. |+||+|++ ||..++||.+|++|+
T Consensus 30 ~v~~~~~~~~~~~~np~-~~vP~L~~~~g~~l~eS~aI~~y~ 70 (71)
T cd03060 30 EVELKNKPAEMLAASPK-GTVPVLVLGNGTVIEESLDIMRWA 70 (71)
T ss_pred EeCCCCCCHHHHHHCCC-CCCCEEEECCCcEEecHHHHHHhh
Confidence 56777788999999999 99999997 499999999999997
No 72
>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.
Probab=99.01 E-value=4.2e-10 Score=67.36 Aligned_cols=37 Identities=38% Similarity=0.489 Sum_probs=34.2
Q ss_pred CCChhhhhhCCCCCccceEEeCCeecccHHHHHHHHHh
Q 038553 7 GKSDLLLKSNPIYKKVPVLLHDGKPLCESTVIVNYIDE 44 (161)
Q Consensus 7 ~~~~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~~ 44 (161)
++.++|+++||. |+||+|+++|.+++||.+|++||++
T Consensus 38 ~~~~~~~~~~p~-~~vP~l~~~~~~l~es~aI~~yL~~ 74 (74)
T cd03045 38 HLKPEFLKLNPQ-HTVPTLVDNGFVLWESHAILIYLVE 74 (74)
T ss_pred cCCHHHHhhCcC-CCCCEEEECCEEEEcHHHHHHHHhC
Confidence 357999999999 9999999999999999999999974
No 73
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=99.01 E-value=7.8e-10 Score=69.41 Aligned_cols=73 Identities=19% Similarity=0.354 Sum_probs=56.7
Q ss_pred HHHHHHHhhhhhhhhhhhhhcC-------CCchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhh
Q 038553 63 RFWADFIDKKVIDAVCNIWKSK-------GKVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWFYAVE 135 (161)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~~~~~ 135 (161)
+.|+.+..+.+...+....... +...+...+.+.+.++.||++|++++|++|+++|+||+++++++.++....
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~t~aDi~~~~~l~~~~~~~ 81 (100)
T cd00299 2 RAWEEWADTTLEPAARRLLLLAFVGPEVDEAALEEAREELAAALAALEKLLAGRPYLAGDRFSLADIALAPVLARLDLLG 81 (100)
T ss_pred hHHHHHHHhhcCCcccceeeeeccCCCCCHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCcCHHHHHHHHHHHHHHHhh
Confidence 4567777776666554443321 334566788899999999999998999999999999999999999987654
No 74
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=99.00 E-value=5.8e-09 Score=76.13 Aligned_cols=131 Identities=19% Similarity=0.333 Sum_probs=88.9
Q ss_pred CCCCCCCCChhhhhhCCCCCccceEEeCCeecccHHHHHHHHHhhCCCC--------CCCC-------------------
Q 038553 1 AENLFGGKSDLLLKSNPIYKKVPVLLHDGKPLCESTVIVNYIDETWPSP--------PLLP------------------- 53 (161)
Q Consensus 1 ~e~~~~~~~~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~~~~~~~--------~l~p------------------- 53 (161)
||||+-.+.+.-.+ . |.|||+|...|..+.||.+|+.-|+.....+ .++|
T Consensus 119 VEVnpV~r~eIk~S--s-ykKVPil~~~Geqm~dSsvIIs~laTyLq~~~q~l~eiiq~yPa~~~~ne~GK~v~~~~NKy 195 (370)
T KOG3029|consen 119 VEVNPVLRQEIKWS--S-YKKVPILLIRGEQMVDSSVIISLLATYLQDKRQDLGEIIQMYPATSFFNEDGKEVNDILNKY 195 (370)
T ss_pred EEecchhhhhcccc--c-cccccEEEeccceechhHHHHHHHHHHhccCCCCHHHHHHhccccccccccccchhhcchhh
Confidence 57787777665555 4 3899999977778999999999885533100 1222
Q ss_pred ----------CCHHHHHHHHHHHHHHhhhhhhhhhhhhhc----------------------------------------
Q 038553 54 ----------SCASERAKARFWADFIDKKVIDAVCNIWKS---------------------------------------- 83 (161)
Q Consensus 54 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------- 83 (161)
.+...+.+.+.|-.|+++.+...+.+....
T Consensus 196 flM~~e~d~~~~ke~~~eerkWR~WvDn~lVHLiSPNvYrn~~EsletFewf~q~G~w~~~FpawEr~lavY~GAtAM~l 275 (370)
T KOG3029|consen 196 FLMYREHDPGVSKETDEEERKWRSWVDNHLVHLISPNVYRNMGESLETFEWFSQAGEWDVHFPAWERDLAVYCGATAMYL 275 (370)
T ss_pred eeeeeccCCCccccchHHHhHHHHHHhhhhhhhcCcccccChhhHHHHHHHHHHcCCccccCchHHHHHHHHhhHHHHHH
Confidence 011123356789999888876664332100
Q ss_pred ------CCCchhhhHHHHHHHHHHHHHHh-CCCCcccCCCCChhHHhHHHHHHHHHHh
Q 038553 84 ------KGKVPGTAKNEFIEILKQLVGAL-GEKDFFGGDSFGFVDVIAIPLTCWFYAV 134 (161)
Q Consensus 84 ------~~~~~~~~~~~~~~~l~~le~~L-~~~~~l~G~~~t~aD~~~~~~l~~~~~~ 134 (161)
+........+.+..+++.|-+.| .+++|+.|++|.+||+++|+.|.-+...
T Consensus 276 isK~LKkkhni~D~Re~lydA~d~Wvaalgknr~flGG~kPnLaDLsvfGvl~sm~gc 333 (370)
T KOG3029|consen 276 ISKMLKKKHNISDEREHLYDAADQWVAALGKNRPFLGGKKPNLADLSVFGVLRSMEGC 333 (370)
T ss_pred HHHHHHhhcccchHHHHHHHHHHHHHHHhCCCCCccCCCCCchhhhhhhhhhhHhhhh
Confidence 01122336677888888888888 5689999999999999999999876643
No 75
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.98 E-value=1.3e-09 Score=69.41 Aligned_cols=76 Identities=20% Similarity=0.186 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhh-----c-C---CCchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHH
Q 038553 58 ERAKARFWADFIDKKVIDAVCNIWK-----S-K---GKVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLT 128 (161)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~---~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l 128 (161)
+++++++|+.+..+.+.+.+..... . . +...+...+++.+.++.||+.|++++|++|+++|+||+++++++
T Consensus 2 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~slaDi~~~~~~ 81 (105)
T cd03179 2 ERAQVLRWLFFEQYSHEPYIATLRFLRVYLGLGEADAEVLAFLRERGHAALAVLEAHLAGRDFLVGDALTIADIALAAYT 81 (105)
T ss_pred cHHHHHHHHHHhhcccCccceeeeeeEeeccCCCCCHHHHHHHHHHHHHHHHHHHHHHccCccccCCCCCHHHHHHHHHH
Confidence 4788999999988777776543211 1 1 23356788889999999999998889999999999999999999
Q ss_pred HHHHH
Q 038553 129 CWFYA 133 (161)
Q Consensus 129 ~~~~~ 133 (161)
.++..
T Consensus 82 ~~~~~ 86 (105)
T cd03179 82 HVADE 86 (105)
T ss_pred Hhccc
Confidence 88653
No 76
>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.
Probab=98.98 E-value=6e-10 Score=66.62 Aligned_cols=36 Identities=33% Similarity=0.421 Sum_probs=33.4
Q ss_pred CCChhhhhhCCCCCccceEEeCCeecccHHHHHHHHH
Q 038553 7 GKSDLLLKSNPIYKKVPVLLHDGKPLCESTVIVNYID 43 (161)
Q Consensus 7 ~~~~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~ 43 (161)
.+.++|+++||. |+||+|+++|..|+||.+|++||+
T Consensus 38 ~~~~~~~~~nP~-~~vP~L~~~~~~l~eS~aI~~YL~ 73 (73)
T cd03047 38 LDTPEFLAMNPN-GRVPVLEDGDFVLWESNAILRYLA 73 (73)
T ss_pred ccCHHHHhhCCC-CCCCEEEECCEEEECHHHHHHHhC
Confidence 467899999999 999999999999999999999984
No 77
>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.97 E-value=4.8e-10 Score=67.01 Aligned_cols=41 Identities=37% Similarity=0.573 Sum_probs=36.5
Q ss_pred CCCCCCCChhhhhhCCCCCccceEE-eCCeecccHHHHHHHHH
Q 038553 2 ENLFGGKSDLLLKSNPIYKKVPVLL-HDGKPLCESTVIVNYID 43 (161)
Q Consensus 2 e~~~~~~~~~~~~~np~~~~vP~L~-~~~~~l~eS~~I~~yl~ 43 (161)
+++...+.++|+++||. ++||+|+ +||..++||.+|++||+
T Consensus 32 ~~~~~~~~~~~~~~~p~-~~vP~l~~~~g~~l~es~aI~~yLe 73 (73)
T cd03049 32 LVNPWSDDESLLAVNPL-GKIPALVLDDGEALFDSRVICEYLD 73 (73)
T ss_pred EcCcccCChHHHHhCCC-CCCCEEEECCCCEEECHHHHHhhhC
Confidence 45667788999999998 9999998 68899999999999985
No 78
>cd03075 GST_N_Mu GST_N family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases inc
Probab=98.96 E-value=6.7e-10 Score=68.02 Aligned_cols=29 Identities=21% Similarity=0.406 Sum_probs=27.5
Q ss_pred CCCCccceEEeCCeecccHHHHHHHHHhhC
Q 038553 17 PIYKKVPVLLHDGKPLCESTVIVNYIDETW 46 (161)
Q Consensus 17 p~~~~vP~L~~~~~~l~eS~~I~~yl~~~~ 46 (161)
|+ |+||+|++||.+++||.||++||++++
T Consensus 54 P~-g~vP~L~~~g~~l~ES~AIl~YLa~~~ 82 (82)
T cd03075 54 DF-PNLPYYIDGDVKLTQSNAILRYIARKH 82 (82)
T ss_pred cC-CCCCEEEECCEEEeehHHHHHHHhhcC
Confidence 98 999999999999999999999999864
No 79
>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....
Probab=98.96 E-value=9.1e-10 Score=66.45 Aligned_cols=38 Identities=39% Similarity=0.583 Sum_probs=34.0
Q ss_pred CCChhhhhhCCCCCccceEEeC-CeecccHHHHHHHHHh
Q 038553 7 GKSDLLLKSNPIYKKVPVLLHD-GKPLCESTVIVNYIDE 44 (161)
Q Consensus 7 ~~~~~~~~~np~~~~vP~L~~~-~~~l~eS~~I~~yl~~ 44 (161)
+++++|+++||..|+||+|+++ |..|+||.||++||++
T Consensus 38 ~~~~e~~~~~p~~g~vP~l~~~~~~~l~es~AI~~YLa~ 76 (76)
T PF02798_consen 38 HKSPEFLAINPMFGKVPALEDGDGFVLTESNAILRYLAR 76 (76)
T ss_dssp GGSHHHHHHTTTSSSSSEEEETTTEEEESHHHHHHHHHH
T ss_pred ccchhhhhcccccceeeEEEECCCCEEEcHHHHHHHhCC
Confidence 4569999999942899999998 9999999999999985
No 80
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=98.93 E-value=7.4e-10 Score=70.13 Aligned_cols=75 Identities=20% Similarity=0.189 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhcCCCchhhhHHHHHHHHHHHHHHhCCCC--cccCCCCChhHHhHHHHHHHHHH
Q 038553 57 SERAKARFWADFIDKKVIDAVCNIWKSKGKVPGTAKNEFIEILKQLVGALGEKD--FFGGDSFGFVDVIAIPLTCWFYA 133 (161)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~--~l~G~~~t~aD~~~~~~l~~~~~ 133 (161)
..++.++.|+++.. ............+...+...+.+.+.++.|++.|+++. |++|++||+||+++|++|..+..
T Consensus 4 ~~~a~i~~W~~f~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~~~ 80 (99)
T PF14497_consen 4 YWRALIDRWLDFSV--AFRRRKARLEKDEASGDFSREELPKALKILEKHLAERGGDFLVGDKPTLADIAVFGFLASLRW 80 (99)
T ss_dssp TTHHHHHHHHH-GH--CCHCCHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhccc--hhhhHHHHHHHhhhhHHhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHHHHHHHhh
Confidence 35667778888551 00000000111245667788899999999999997766 99999999999999999866654
No 81
>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.
Probab=98.92 E-value=1.1e-09 Score=65.32 Aligned_cols=37 Identities=35% Similarity=0.447 Sum_probs=34.0
Q ss_pred CCCChhhhhhCCCCCccceEEeCCeecccHHHHHHHHH
Q 038553 6 GGKSDLLLKSNPIYKKVPVLLHDGKPLCESTVIVNYID 43 (161)
Q Consensus 6 ~~~~~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~ 43 (161)
..+.++|+++||. +++|+|+++|..++||.+|++||+
T Consensus 37 ~~~~~~~~~~~p~-~~vP~l~~~~~~l~es~aI~~yL~ 73 (73)
T cd03042 37 EQLSPAYRALNPQ-GLVPTLVIDGLVLTQSLAIIEYLD 73 (73)
T ss_pred CcCChHHHHhCCC-CCCCEEEECCEEEEcHHHHHHHhC
Confidence 3567999999998 999999999999999999999984
No 82
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=98.91 E-value=7.9e-09 Score=63.92 Aligned_cols=67 Identities=16% Similarity=0.084 Sum_probs=49.4
Q ss_pred hhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhhhhCCCCchhhhhchhhhhhhCC
Q 038553 90 TAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWFYAVEKFGGFKVENECMQRETVARILP 157 (161)
Q Consensus 90 ~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~~~~~~~~~~~~~rp~~~~~~~ 157 (161)
...+++.+.++.+|+.|++++|++|+++|+||+++++++.++.... .+.......+.+.|.+++++.
T Consensus 19 ~~~~~~~~~l~~le~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~~~~-~~~~~~~~~~~~~p~l~~~~~ 85 (88)
T cd03193 19 EIYSLAKKDLKALSDLLGDKKFFFGDKPTSLDATVFGHLASILYAP-LPNSALQLILKEYPNLVEYCE 85 (88)
T ss_pred HHHHHHHHHHHHHHHHhCCCCccCCCCCCHHHHHHHHHHHHHHhcC-CCChHHHHHHHhCcHHHHHHH
Confidence 5677899999999999999999999999999999999998875321 111101123556777776653
No 83
>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.91 E-value=1.5e-09 Score=64.67 Aligned_cols=36 Identities=39% Similarity=0.579 Sum_probs=33.6
Q ss_pred CCChhhhhhCCCCCccceEEeCCeecccHHHHHHHHH
Q 038553 7 GKSDLLLKSNPIYKKVPVLLHDGKPLCESTVIVNYID 43 (161)
Q Consensus 7 ~~~~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~ 43 (161)
+++++|+++||. +++|+|+++|..++||.+|++||+
T Consensus 38 ~~~~~~~~~~p~-~~vP~l~~~~~~i~es~aI~~yl~ 73 (73)
T cd03056 38 TRTPEFLALNPN-GEVPVLELDGRVLAESNAILVYLA 73 (73)
T ss_pred cCCHHHHHhCCC-CCCCEEEECCEEEEcHHHHHHHhC
Confidence 478999999998 999999999999999999999984
No 84
>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.90 E-value=2.1e-09 Score=64.33 Aligned_cols=35 Identities=31% Similarity=0.531 Sum_probs=32.9
Q ss_pred CChhhhhhCCCCCccceEEeCCeecccHHHHHHHHH
Q 038553 8 KSDLLLKSNPIYKKVPVLLHDGKPLCESTVIVNYID 43 (161)
Q Consensus 8 ~~~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~ 43 (161)
+.++|+++||. |+||+|+++|.+++||.+|++||+
T Consensus 39 ~~~~~~~~nP~-g~vP~L~~~g~~l~eS~aI~~YL~ 73 (73)
T cd03043 39 TRARILEFSPT-GKVPVLVDGGIVVWDSLAICEYLA 73 (73)
T ss_pred ccHHHHhhCCC-CcCCEEEECCEEEEcHHHHHHHhC
Confidence 56899999999 999999999999999999999984
No 85
>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.90 E-value=1.4e-09 Score=65.70 Aligned_cols=38 Identities=34% Similarity=0.508 Sum_probs=34.0
Q ss_pred CChhhhhhCCCCCccceEEe--CCeecccHHHHHHHHHhhC
Q 038553 8 KSDLLLKSNPIYKKVPVLLH--DGKPLCESTVIVNYIDETW 46 (161)
Q Consensus 8 ~~~~~~~~np~~~~vP~L~~--~~~~l~eS~~I~~yl~~~~ 46 (161)
..++|+++||. ++||+|++ +|..++||.+|++||+++|
T Consensus 38 ~~~~~~~~~p~-~~vP~l~~~~~~~~l~es~~I~~yL~~~~ 77 (77)
T cd03041 38 KRDKFLEKGGK-VQVPYLVDPNTGVQMFESADIVKYLFKTY 77 (77)
T ss_pred HHHHHHHhCCC-CcccEEEeCCCCeEEEcHHHHHHHHHHhC
Confidence 46789999999 99999996 4689999999999999875
No 86
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=98.89 E-value=6.8e-09 Score=66.08 Aligned_cols=77 Identities=18% Similarity=0.245 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhcC-----CCchhhhHHHHHHHHHHHHHHhCC--CCcccCCCCChhHHhHHHHHHH
Q 038553 58 ERAKARFWADFIDKKVIDAVCNIWKSK-----GKVPGTAKNEFIEILKQLVGALGE--KDFFGGDSFGFVDVIAIPLTCW 130 (161)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~aD~~~~~~l~~ 130 (161)
++++++.+++..++........++... +.........+.+.++.||++|++ ++|++|+++|+||+++++++.+
T Consensus 2 e~~~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l~~~~~~ 81 (104)
T cd03192 2 EAARVDALVDTIADLRAEFAKYFYEKDGEEKKEKKKEFLKEAIPKYLKKLEKILKENGGGYLVGDKLTWADLVVFDVLDY 81 (104)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHHHHHHHH
Confidence 467888888887665544444443221 334556777889999999999977 8999999999999999999988
Q ss_pred HHHh
Q 038553 131 FYAV 134 (161)
Q Consensus 131 ~~~~ 134 (161)
+...
T Consensus 82 ~~~~ 85 (104)
T cd03192 82 LLYL 85 (104)
T ss_pred HHhh
Confidence 7643
No 87
>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma
Probab=98.83 E-value=1.9e-09 Score=64.27 Aligned_cols=34 Identities=35% Similarity=0.504 Sum_probs=31.3
Q ss_pred hhhhhhCCCCCccceEEeCCeecccHHHHHHHHHh
Q 038553 10 DLLLKSNPIYKKVPVLLHDGKPLCESTVIVNYIDE 44 (161)
Q Consensus 10 ~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~~ 44 (161)
++|.++||. ++||+|+++|..++||.+|++||++
T Consensus 39 ~~~~~~~p~-~~vP~L~~~~~~l~es~aI~~yL~~ 72 (72)
T cd03039 39 LDLKPTLPF-GQLPVLEIDGKKLTQSNAILRYLAR 72 (72)
T ss_pred hhhccCCcC-CCCCEEEECCEEEEecHHHHHHhhC
Confidence 458899999 9999999999999999999999974
No 88
>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.
Probab=98.82 E-value=4.3e-09 Score=64.62 Aligned_cols=36 Identities=31% Similarity=0.600 Sum_probs=32.3
Q ss_pred hhhhhhCCCCCccceEEeC-CeecccHHHHHHHHHhhCC
Q 038553 10 DLLLKSNPIYKKVPVLLHD-GKPLCESTVIVNYIDETWP 47 (161)
Q Consensus 10 ~~~~~~np~~~~vP~L~~~-~~~l~eS~~I~~yl~~~~~ 47 (161)
+++ ++||. ++||+|+++ |..++||.+|++||+++||
T Consensus 48 ~~~-~~~p~-~~vP~L~~~~~~~l~eS~aI~~yL~~~~p 84 (84)
T cd03038 48 GEL-TSGGF-YTVPVIVDGSGEVIGDSFAIAEYLEEAYP 84 (84)
T ss_pred ccc-cCCCC-ceeCeEEECCCCEEeCHHHHHHHHHHhCc
Confidence 344 78998 999999988 8999999999999999875
No 89
>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele
Probab=98.82 E-value=4.5e-09 Score=63.19 Aligned_cols=35 Identities=26% Similarity=0.572 Sum_probs=32.0
Q ss_pred hhhhCCCCCccceEEeCCeecccHHHHHHHHHhhCC
Q 038553 12 LLKSNPIYKKVPVLLHDGKPLCESTVIVNYIDETWP 47 (161)
Q Consensus 12 ~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~~~~~ 47 (161)
+.++||. |+||+|+++|.+++||.+|++||+++|+
T Consensus 41 ~~~~~p~-g~vPvl~~~g~~l~eS~~I~~yL~~~~~ 75 (75)
T cd03080 41 LAKRSPK-GKLPFIELNGEKIADSELIIDHLEEKYG 75 (75)
T ss_pred cccCCCC-CCCCEEEECCEEEcCHHHHHHHHHHHcC
Confidence 3478998 9999999999999999999999999875
No 90
>cd03055 GST_N_Omega GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega
Probab=98.82 E-value=3.5e-09 Score=65.83 Aligned_cols=41 Identities=41% Similarity=0.606 Sum_probs=35.7
Q ss_pred CCCCCCCChhhhhhCCCCCccceEEeC-CeecccHHHHHHHHH
Q 038553 2 ENLFGGKSDLLLKSNPIYKKVPVLLHD-GKPLCESTVIVNYID 43 (161)
Q Consensus 2 e~~~~~~~~~~~~~np~~~~vP~L~~~-~~~l~eS~~I~~yl~ 43 (161)
++++..++++|.++||. ++||+|+++ |..++||.+|++||+
T Consensus 48 ~v~~~~~~~~~~~~np~-~~vPvL~~~~g~~l~eS~aI~~yLe 89 (89)
T cd03055 48 NINLKDKPDWFLEKNPQ-GKVPALEIDEGKVVYESLIICEYLD 89 (89)
T ss_pred EeCCCCCcHHHHhhCCC-CCcCEEEECCCCEEECHHHHHHhhC
Confidence 35566677889999998 999999975 899999999999985
No 91
>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the
Probab=98.79 E-value=7.5e-09 Score=62.88 Aligned_cols=30 Identities=30% Similarity=0.567 Sum_probs=28.3
Q ss_pred CCCCccceEEeCCeecccHHHHHHHHHhhCC
Q 038553 17 PIYKKVPVLLHDGKPLCESTVIVNYIDETWP 47 (161)
Q Consensus 17 p~~~~vP~L~~~~~~l~eS~~I~~yl~~~~~ 47 (161)
|. |+||+|++||.+|+||.||++||+++++
T Consensus 48 ~~-g~vP~L~~~g~~l~ES~AI~~YL~~~~~ 77 (79)
T cd03077 48 MF-QQVPMVEIDGMKLVQTRAILNYIAGKYN 77 (79)
T ss_pred CC-CCCCEEEECCEEEeeHHHHHHHHHHHcC
Confidence 58 9999999999999999999999999887
No 92
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=98.77 E-value=6.8e-08 Score=66.14 Aligned_cols=110 Identities=21% Similarity=0.236 Sum_probs=81.3
Q ss_pred CccceEE-eCCeecccHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHhhhhhhhhhhhhhc---------------
Q 038553 20 KKVPVLL-HDGKPLCESTVIVNYIDETWPSPPLLPSCASERAKARFWADFIDKKVIDAVCNIWKS--------------- 83 (161)
Q Consensus 20 ~~vP~L~-~~~~~l~eS~~I~~yl~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 83 (161)
.+||+|+ ++|..+.||..|+.|+.+..+.+-+... -+..+..|+.-+.+-......+.+..
T Consensus 46 KqVPiL~Kedg~~m~ESlDIV~y~d~~~~~~~lt~~---~~pai~~wlrkv~~y~nkll~PR~~k~~l~EF~T~sA~~yf 122 (215)
T COG2999 46 KQVPILQKEDGRAMPESLDIVHYVDELDGKPLLTGK---VRPAIEAWLRKVNGYLNKLLLPRFAKSALPEFATPSARKYF 122 (215)
T ss_pred cccceEEccccccchhhhHHHHHHHHhcCchhhccC---cCHHHHHHHHHhcchHhhhhhhhHhhcCCccccCHHHHHHH
Confidence 6899999 8999999999999999999885444433 24567778877777666665554421
Q ss_pred --C-C----------CchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHH
Q 038553 84 --K-G----------KVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWFYA 133 (161)
Q Consensus 84 --~-~----------~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~~~ 133 (161)
+ + .......+++...|+.++..+.+.. -.....++-|+.+|++|+.+..
T Consensus 123 ~~KKe~s~g~F~~~l~~t~~~~~~i~~dl~~l~~Li~~~s-~~n~~l~~ddi~vFplLRnlt~ 184 (215)
T COG2999 123 TDKKEASEGSFESLLNHTAQYLKRIQADLRALDKLIVGPS-AVNGELSEDDILVFPLLRNLTL 184 (215)
T ss_pred HhhhhhccccHHHHHhchHHHHHHHHHHHHHHHHHhcCcc-hhccccchhhhhhhHHhcccee
Confidence 0 0 2235577889999999999886544 2234699999999999988764
No 93
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.74 E-value=3e-07 Score=68.26 Aligned_cols=116 Identities=18% Similarity=0.259 Sum_probs=84.9
Q ss_pred hCCCCCccceEE-eCCeecccHHHHHHHHHhhCCCCCCCCC-CHHHHHHHHHHHHHHhhhhhhhhhhhhhc---------
Q 038553 15 SNPIYKKVPVLL-HDGKPLCESTVIVNYIDETWPSPPLLPS-CASERAKARFWADFIDKKVIDAVCNIWKS--------- 83 (161)
Q Consensus 15 ~np~~~~vP~L~-~~~~~l~eS~~I~~yl~~~~~~~~l~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 83 (161)
.+|. |++|+|+ ++|..++.-.-|+.||...-.+-.+-+. ...+.+....|+.++...+.++....+..
T Consensus 44 ~s~s-g~LP~l~~~ng~~va~~~~iv~~L~k~~~ky~~d~dl~~kq~a~~~a~~sll~~~l~~a~~~t~~v~~~Ny~e~T 122 (313)
T KOG3028|consen 44 RSPS-GKLPYLITDNGTKVAGPVKIVQFLKKNTKKYNLDADLSAKQLADTLAFMSLLEENLEPALLYTFWVDTENYNEVT 122 (313)
T ss_pred CCCC-CCCCeEEecCCceeccHHHHHHHHHHhcccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHh
Confidence 3677 8999999 5669999999999999883111111111 24577788889998888887774322100
Q ss_pred ----------------------------------CCCchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHH
Q 038553 84 ----------------------------------KGKVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTC 129 (161)
Q Consensus 84 ----------------------------------~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~ 129 (161)
..+..++..+...+++..|++.|++++|++|++||-.|+.+|.++.
T Consensus 123 kk~yak~l~fP~n~~~p~~l~~qAk~rl~l~~g~~~~~e~~i~~~Aska~~~LS~~Lgs~kffFgd~psslDa~lfs~la 202 (313)
T KOG3028|consen 123 KKWYAKALPFPLNYILPGKLQRQAKERLQLTLGELTEREDQIYKDASKALNLLSTLLGSKKFFFGDKPSSLDALLFSYLA 202 (313)
T ss_pred HHHHHhcCCCchhhcchhhhHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHhcCceEeeCCCCchHHHHHHHHHH
Confidence 0112345566778999999999999999999999999999999987
Q ss_pred HH
Q 038553 130 WF 131 (161)
Q Consensus 130 ~~ 131 (161)
.+
T Consensus 203 ~~ 204 (313)
T KOG3028|consen 203 IL 204 (313)
T ss_pred HH
Confidence 73
No 94
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.74 E-value=2.8e-08 Score=65.53 Aligned_cols=49 Identities=24% Similarity=0.318 Sum_probs=43.3
Q ss_pred CchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHh
Q 038553 86 KVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWFYAV 134 (161)
Q Consensus 86 ~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~~~~ 134 (161)
...+...+.+.+.++.+|++|++++|+.|+++|+||+++++++.|....
T Consensus 54 ~~~~~~~~~~~~~l~~l~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~~~~ 102 (124)
T cd03202 54 AGREAALANFRAALEPLRATLKGQPFLGGAAPNYADYIVFGGFQWARIV 102 (124)
T ss_pred cchHHHHHHHHHHHHHHHHHHcCCCccCCCCCchhHHHHHHHHHHHHHc
Confidence 3356778889999999999999999999999999999999999887753
No 95
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.73 E-value=3.9e-08 Score=65.06 Aligned_cols=72 Identities=13% Similarity=0.123 Sum_probs=55.1
Q ss_pred CCchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhhhhCCCCchhhhhchhhhhhhCC
Q 038553 85 GKVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWFYAVEKFGGFKVENECMQRETVARILP 157 (161)
Q Consensus 85 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~~~~~~~~~~~~~rp~~~~~~~ 157 (161)
....++....+.+.|+.|++.|++++|++|++||.+|+++|+++.++... ..++-.....+.+.|.++++..
T Consensus 52 r~~~ee~~~~~~~~l~aLs~~Lg~~~~l~Gd~pT~~Da~vf~~la~~~~~-~~~~~~l~~~~~~~pnL~~y~~ 123 (126)
T cd03211 52 DKTLDQVIEEVDQCCQALSQRLGTQPYFFGDQPTELDALVFGHLFTILTT-QLPNDELAEKVKKYSNLLAFCR 123 (126)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCcHHHHHHHHHHHHHHhc-CCCChHHHHHHHhCcHHHHHHH
Confidence 45667888899999999999999999999999999999999998877531 1121122334677777777654
No 96
>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.
Probab=98.71 E-value=1.5e-08 Score=60.37 Aligned_cols=36 Identities=39% Similarity=0.622 Sum_probs=32.6
Q ss_pred CCChhhhhhCCCCCccceEE-eCCeecccHHHHHHHHH
Q 038553 7 GKSDLLLKSNPIYKKVPVLL-HDGKPLCESTVIVNYID 43 (161)
Q Consensus 7 ~~~~~~~~~np~~~~vP~L~-~~~~~l~eS~~I~~yl~ 43 (161)
.+.++|.++||. ++||+|+ +||..++||.+|++||+
T Consensus 38 ~~~~~~~~~~p~-~~vP~l~~~~~~~l~es~aI~~yLe 74 (74)
T cd03051 38 QRSPEFLAKNPA-GTVPVLELDDGTVITESVAICRYLE 74 (74)
T ss_pred cCCHHHHhhCCC-CCCCEEEeCCCCEEecHHHHHHHhC
Confidence 467899999999 9999998 68889999999999985
No 97
>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.
Probab=98.54 E-value=5.8e-08 Score=58.48 Aligned_cols=34 Identities=32% Similarity=0.521 Sum_probs=29.4
Q ss_pred hhhCCCCCccceEEeC----CeecccHHHHHHHHHhhCC
Q 038553 13 LKSNPIYKKVPVLLHD----GKPLCESTVIVNYIDETWP 47 (161)
Q Consensus 13 ~~~np~~~~vP~L~~~----~~~l~eS~~I~~yl~~~~~ 47 (161)
...||. ++||+|+++ |.+++||.+|++||+++.+
T Consensus 40 ~~~~~~-~~vP~l~~~~~~~~~~l~eS~~I~~yL~~~~~ 77 (77)
T cd03040 40 IKWSSY-KKVPILRVESGGDGQQLVDSSVIISTLKTYLG 77 (77)
T ss_pred HHHhCC-CccCEEEECCCCCccEEEcHHHHHHHHHHHcC
Confidence 367998 999999954 7899999999999998753
No 98
>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.54 E-value=9.2e-08 Score=57.15 Aligned_cols=30 Identities=23% Similarity=0.395 Sum_probs=27.9
Q ss_pred hCCCCCccceEEeCCeecccHHHHHHHHHhh
Q 038553 15 SNPIYKKVPVLLHDGKPLCESTVIVNYIDET 45 (161)
Q Consensus 15 ~np~~~~vP~L~~~~~~l~eS~~I~~yl~~~ 45 (161)
.+|. |+||+|++||.+|+||.+|+.||+++
T Consensus 45 ~~P~-GkVP~L~~dg~vI~eS~aIl~yL~~~ 74 (74)
T cd03079 45 MSPS-GKVPFIRVGNQIVSEFGPIVQFVEAK 74 (74)
T ss_pred cCCC-CcccEEEECCEEEeCHHHHHHHHhcC
Confidence 7888 99999999999999999999999864
No 99
>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=98.49 E-value=1.5e-07 Score=55.76 Aligned_cols=34 Identities=38% Similarity=0.516 Sum_probs=29.4
Q ss_pred hhhhhhCCCCCccceEEeC-CeecccHHHHHHHHHh
Q 038553 10 DLLLKSNPIYKKVPVLLHD-GKPLCESTVIVNYIDE 44 (161)
Q Consensus 10 ~~~~~~np~~~~vP~L~~~-~~~l~eS~~I~~yl~~ 44 (161)
...++.||. ++||+|+++ |..++||.+|++||++
T Consensus 37 ~~~~~~~~~-~~vP~L~~~~~~~l~es~aI~~yL~~ 71 (71)
T cd03037 37 ATPIRMIGA-KQVPILEKDDGSFMAESLDIVAFIDE 71 (71)
T ss_pred HHHHHhcCC-CccCEEEeCCCeEeehHHHHHHHHhC
Confidence 345678998 999999965 8999999999999974
No 100
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=98.46 E-value=4.3e-07 Score=60.91 Aligned_cols=47 Identities=26% Similarity=0.296 Sum_probs=41.7
Q ss_pred CchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHH
Q 038553 86 KVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWFY 132 (161)
Q Consensus 86 ~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~~ 132 (161)
...++..+.+.+.++.|+..|++++|++|+++|.+|+++++++..+.
T Consensus 60 ~~~~~~~~~a~~~l~~l~~~L~~~~~~~Gd~~t~~D~~~~~~l~~~~ 106 (137)
T cd03212 60 EVEAEIYRDAKECLNLLSQRLGESQFFFGDTPTSLDALVFGYLAPLL 106 (137)
T ss_pred hhHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcHHHHHHHHHHHHHH
Confidence 34677788889999999999999999999999999999999987664
No 101
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.39 E-value=1.2e-06 Score=55.10 Aligned_cols=46 Identities=11% Similarity=0.113 Sum_probs=39.9
Q ss_pred CCchhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHH
Q 038553 85 GKVPGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWFYA 133 (161)
Q Consensus 85 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~~~ 133 (161)
+...+.....+.+.+..+|++|++++| +++|+||+++++.+.|...
T Consensus 32 ~~~~~~~~~~~~~~l~~le~~L~~~~~---d~~TlADi~l~~~l~~~~~ 77 (98)
T cd03205 32 QPWLERQRGKIERALDALEAELAKLPL---DPLDLADIAVACALGYLDF 77 (98)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhCCC---CCCCHHHHHHHHHHHHHHh
Confidence 344677888899999999999988888 8999999999999988764
No 102
>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma
Probab=98.39 E-value=3.7e-07 Score=53.11 Aligned_cols=32 Identities=44% Similarity=0.635 Sum_probs=29.8
Q ss_pred hhhhhCCCCCccceEEeCCeecccHHHHHHHHH
Q 038553 11 LLLKSNPIYKKVPVLLHDGKPLCESTVIVNYID 43 (161)
Q Consensus 11 ~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~ 43 (161)
++.+++|. +++|+|+++|..++||.+|++||+
T Consensus 40 ~~~~~~~~-~~~P~l~~~~~~~~es~~I~~yl~ 71 (71)
T cd00570 40 EFLALNPL-GKVPVLEDGGLVLTESLAILEYLA 71 (71)
T ss_pred HHHhcCCC-CCCCEEEECCEEEEcHHHHHHHhC
Confidence 48889998 999999999999999999999984
No 103
>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.
Probab=98.36 E-value=4.9e-07 Score=53.71 Aligned_cols=30 Identities=27% Similarity=0.609 Sum_probs=28.3
Q ss_pred hCCCCCccceEEeCCeecccHHHHHHHHHhh
Q 038553 15 SNPIYKKVPVLLHDGKPLCESTVIVNYIDET 45 (161)
Q Consensus 15 ~np~~~~vP~L~~~~~~l~eS~~I~~yl~~~ 45 (161)
+||. |+||+|+++|..++||.+|++||+++
T Consensus 43 ~~p~-g~vP~l~~~g~~l~es~~I~~yL~~~ 72 (72)
T cd03054 43 RSPT-GKLPFLELNGEKIADSEKIIEYLKKK 72 (72)
T ss_pred cCCC-cccCEEEECCEEEcCHHHHHHHHhhC
Confidence 8998 99999999999999999999999874
No 104
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.33 E-value=4.8e-06 Score=56.24 Aligned_cols=46 Identities=20% Similarity=0.319 Sum_probs=36.9
Q ss_pred hhhHHHHHHHHHHHHHHhC-CCCcccCCCCChhHHhHHHHHHHHHHh
Q 038553 89 GTAKNEFIEILKQLVGALG-EKDFFGGDSFGFVDVIAIPLTCWFYAV 134 (161)
Q Consensus 89 ~~~~~~~~~~l~~le~~L~-~~~~l~G~~~t~aD~~~~~~l~~~~~~ 134 (161)
+...+.+...++.+-+.++ +++|+.|++||+||+++++.+..+...
T Consensus 78 ~D~r~~L~~a~~~w~~~~~~~~~FlaGd~ptIADisvyg~l~s~e~~ 124 (149)
T cd03197 78 DDVREWLYDALNTWVAALGKDRQFHGGSKPNLADLAVYGVLRSVEGH 124 (149)
T ss_pred chHHHHHHHHHHHHHHHhcCCCCccCCCCCCHHHHHHHHHHHHHHHh
Confidence 5567777888887766664 468999999999999999998777644
No 105
>cd03078 GST_N_Metaxin1_like GST_N family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins including Tom37 from fungi. Mammalian metaxin (or metaxin 1) and the fungal protein Tom37 are components of preprotein import complexes of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals.
Probab=97.83 E-value=2.5e-05 Score=46.57 Aligned_cols=31 Identities=26% Similarity=0.542 Sum_probs=28.1
Q ss_pred hhCCCCCccceEEeCCeecccHHHHHHHHHhh
Q 038553 14 KSNPIYKKVPVLLHDGKPLCESTVIVNYIDET 45 (161)
Q Consensus 14 ~~np~~~~vP~L~~~~~~l~eS~~I~~yl~~~ 45 (161)
..+|. |++|+|++++..+.+|..|++||.++
T Consensus 42 ~~sp~-gkLP~l~~~~~~i~d~~~Ii~~L~~~ 72 (73)
T cd03078 42 WRSPT-GKLPALLTSGTKISGPEKIIEYLRKQ 72 (73)
T ss_pred CCCCC-CccCEEEECCEEecChHHHHHHHHHc
Confidence 46787 99999999999999999999999864
No 106
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=97.01 E-value=0.00067 Score=54.38 Aligned_cols=89 Identities=21% Similarity=0.248 Sum_probs=67.8
Q ss_pred ceEEeCCeecccHHHHHHHHHhhCC-CCCCCCCCHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCCchhhhHHHHHHHHHH
Q 038553 23 PVLLHDGKPLCESTVIVNYIDETWP-SPPLLPSCASERAKARFWADFIDKKVIDAVCNIWKSKGKVPGTAKNEFIEILKQ 101 (161)
Q Consensus 23 P~L~~~~~~l~eS~~I~~yl~~~~~-~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 101 (161)
+.+..++..+..+..+..|.+.... .+.+|+.. .++.+++.|.++.... ....+...+..
T Consensus 39 ~~~~~d~~~l~~a~~~~~~~~~~~~~~~~lf~~~-~d~~~vd~w~~~s~~~------------------~~~~~s~~~~~ 99 (712)
T KOG1147|consen 39 DKQFLDGRKLNGATEPVVYSAALAKADPKLFGNN-IDRSQVDHWVSFSSTF------------------SFDEISSSLSE 99 (712)
T ss_pred hhhccccccccCCccchhhhhhhcccCHhHcCCc-ccHHHHHHHHHHhhhc------------------chHHHHHHHHH
Confidence 3333456667777777777764433 44688876 7899999999987651 24556778889
Q ss_pred HHHHhCCCCcccCCCCChhHHhHHHHHHH
Q 038553 102 LVGALGEKDFFGGDSFGFVDVIAIPLTCW 130 (161)
Q Consensus 102 le~~L~~~~~l~G~~~t~aD~~~~~~l~~ 130 (161)
++..|.-..||+|+++|+||+++|+.++.
T Consensus 100 ld~~l~~~t~lvg~sls~Ad~aiw~~l~~ 128 (712)
T KOG1147|consen 100 LDKFLVLRTFLVGNSLSIADFAIWGALHS 128 (712)
T ss_pred HHhhhhHHHHhhccchhHHHHHHHHHHhc
Confidence 99999889999999999999999999965
No 107
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=96.78 E-value=0.013 Score=38.88 Aligned_cols=46 Identities=20% Similarity=0.217 Sum_probs=35.4
Q ss_pred hhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHh
Q 038553 88 PGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWFYAV 134 (161)
Q Consensus 88 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~~~~ 134 (161)
..+..++++..|..||..+.......| ++|+-||.+|++|+.+...
T Consensus 57 t~~~i~~l~~~L~~Le~ll~~~~~~n~-~LS~dDi~lFp~LR~Ltiv 102 (132)
T PF04399_consen 57 TPELIAELNADLEELEPLLASPNAVNG-ELSIDDIILFPILRSLTIV 102 (132)
T ss_dssp HHHHHHHHHHHHHHHHHH-SCTTBTTS-S--HHHHHHHHHHHHHCTC
T ss_pred CHHHHHHHHHHHHHHHHHhccccccCC-CCCHHHHHHHHHHhhhhhc
Confidence 467888999999999999986555544 8999999999999988753
No 108
>PF10568 Tom37: Outer mitochondrial membrane transport complex protein; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=96.36 E-value=0.0045 Score=36.70 Aligned_cols=27 Identities=26% Similarity=0.485 Sum_probs=25.3
Q ss_pred hCCCCCccceEEe-CCeecccHHHHHHHH
Q 038553 15 SNPIYKKVPVLLH-DGKPLCESTVIVNYI 42 (161)
Q Consensus 15 ~np~~~~vP~L~~-~~~~l~eS~~I~~yl 42 (161)
++|. |++|+|.+ ++..+.+-..|++||
T Consensus 44 ~Spt-g~LP~L~~~~~~~vsg~~~Iv~yL 71 (72)
T PF10568_consen 44 LSPT-GELPALIDSGGTWVSGFRNIVEYL 71 (72)
T ss_pred cCCC-CCCCEEEECCCcEEECHHHHHHhh
Confidence 6797 99999998 999999999999998
No 109
>TIGR02190 GlrX-dom Glutaredoxin-family domain. This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.
Probab=95.81 E-value=0.0091 Score=35.89 Aligned_cols=34 Identities=21% Similarity=0.262 Sum_probs=29.1
Q ss_pred ChhhhhhCCCCCccceEEeCCeecccHHHHHHHHH
Q 038553 9 SDLLLKSNPIYKKVPVLLHDGKPLCESTVIVNYID 43 (161)
Q Consensus 9 ~~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~ 43 (161)
.+++...++. .+||++..||..+.++..|..||+
T Consensus 46 ~~~~~~~~g~-~~vP~i~i~g~~igG~~~l~~~l~ 79 (79)
T TIGR02190 46 GRSLRAVTGA-TTVPQVFIGGKLIGGSDELEAYLA 79 (79)
T ss_pred HHHHHHHHCC-CCcCeEEECCEEEcCHHHHHHHhC
Confidence 3456667787 899999999999999999999984
No 110
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=94.99 E-value=0.17 Score=33.40 Aligned_cols=46 Identities=13% Similarity=0.090 Sum_probs=37.1
Q ss_pred hhhhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHh
Q 038553 88 PGTAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWFYAV 134 (161)
Q Consensus 88 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~~~~ 134 (161)
.....+++...|..++..+..... .+..+|+.|+.+|++|+.+...
T Consensus 58 t~~~i~~l~~~L~~l~~ll~~~~~-~n~~ls~DDi~lFp~LR~Lt~v 103 (128)
T cd03199 58 TPQYIAALNALLEELDPLILSSEA-VNGQLSTDDIILFPILRNLTLV 103 (128)
T ss_pred cHHHHHHHHHHHHHHHHHHcCccc-cCCcCCHHHHHHHHHHhhhhhh
Confidence 356788899999999999954443 4567999999999999988764
No 111
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=94.11 E-value=0.14 Score=35.54 Aligned_cols=38 Identities=32% Similarity=0.382 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHhCCC---CcccCCC-CChhHHhHHHHHHHHH
Q 038553 95 FIEILKQLVGALGEK---DFFGGDS-FGFVDVIAIPLTCWFY 132 (161)
Q Consensus 95 ~~~~l~~le~~L~~~---~~l~G~~-~t~aD~~~~~~l~~~~ 132 (161)
-.+++..|++.|++. .|++|+. +|-.||.+|+.|.-+.
T Consensus 113 a~~~l~~L~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l~l 154 (168)
T PF11801_consen 113 AMECLSLLEELLGEWEEARYFFGDSKPSSLDCLAFAYLALLL 154 (168)
T ss_pred HHHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHh
Confidence 467788889999887 9999987 9999999999987655
No 112
>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.
Probab=93.92 E-value=0.079 Score=30.96 Aligned_cols=32 Identities=22% Similarity=0.271 Sum_probs=26.6
Q ss_pred hhhhhCCCCCccceEEeCCeecccHHHHHHHHH
Q 038553 11 LLLKSNPIYKKVPVLLHDGKPLCESTVIVNYID 43 (161)
Q Consensus 11 ~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~ 43 (161)
.+...... .++|.+..||..+.++..|.+||+
T Consensus 41 ~~~~~~g~-~~vP~ifi~g~~igg~~~l~~~l~ 72 (72)
T cd03029 41 SLRAVTGA-MTVPQVFIDGELIGGSDDLEKYFA 72 (72)
T ss_pred HHHHHhCC-CCcCeEEECCEEEeCHHHHHHHhC
Confidence 34455676 799999999999999999999974
No 113
>PRK10638 glutaredoxin 3; Provisional
Probab=92.93 E-value=0.13 Score=31.08 Aligned_cols=36 Identities=14% Similarity=0.198 Sum_probs=29.6
Q ss_pred CChhhhhhCCCCCccceEEeCCeecccHHHHHHHHHh
Q 038553 8 KSDLLLKSNPIYKKVPVLLHDGKPLCESTVIVNYIDE 44 (161)
Q Consensus 8 ~~~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~~ 44 (161)
..+++...++. .++|++..||..+.....+.++-.+
T Consensus 40 ~~~~l~~~~g~-~~vP~i~~~g~~igG~~~~~~~~~~ 75 (83)
T PRK10638 40 KREEMIKRSGR-TTVPQIFIDAQHIGGCDDLYALDAR 75 (83)
T ss_pred HHHHHHHHhCC-CCcCEEEECCEEEeCHHHHHHHHHc
Confidence 35678889998 9999999999999988887776543
No 114
>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family. This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.
Probab=90.56 E-value=0.41 Score=27.37 Aligned_cols=32 Identities=19% Similarity=0.270 Sum_probs=24.4
Q ss_pred hhhhhhCCCCCccceEEeCCeec--ccHHHHHHHH
Q 038553 10 DLLLKSNPIYKKVPVLLHDGKPL--CESTVIVNYI 42 (161)
Q Consensus 10 ~~~~~~np~~~~vP~L~~~~~~l--~eS~~I~~yl 42 (161)
+++.+.++. ..+|++..+|..+ .++..|.++|
T Consensus 40 ~~~~~~~~~-~~vP~~~~~~~~~~g~~~~~i~~~i 73 (74)
T TIGR02196 40 EEVLKVLGQ-RGVPVIVIGHKIIVGFDPEKLDQLL 73 (74)
T ss_pred HHHHHHhCC-CcccEEEECCEEEeeCCHHHHHHHh
Confidence 456778897 8999999888777 5666666665
No 115
>PF11287 DUF3088: Protein of unknown function (DUF3088); InterPro: IPR021439 This family of proteins with unknown function appears to be restricted to Proteobacteria.
Probab=89.70 E-value=0.45 Score=30.53 Aligned_cols=28 Identities=29% Similarity=0.529 Sum_probs=23.5
Q ss_pred CccceEE-eCCe-------------ecccHHHHHHHHHhhCC
Q 038553 20 KKVPVLL-HDGK-------------PLCESTVIVNYIDETWP 47 (161)
Q Consensus 20 ~~vP~L~-~~~~-------------~l~eS~~I~~yl~~~~~ 47 (161)
..+|+|+ .++. .|+++..|+.||+++|+
T Consensus 67 QslPvLVL~~~~~~~~~~~~~~~~rfi~d~~~I~~~La~r~g 108 (112)
T PF11287_consen 67 QSLPVLVLADGAPSPDDAGSHGGRRFIDDPRRILRYLAERHG 108 (112)
T ss_pred cCCCEEEeCCCCCCcccccccCCeEEeCCHHHHHHHHHHHcC
Confidence 5689998 4443 68999999999999998
No 116
>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which
Probab=89.37 E-value=0.58 Score=26.49 Aligned_cols=32 Identities=13% Similarity=0.127 Sum_probs=26.8
Q ss_pred ChhhhhhCCCCCccceEEeCCeecccHHHHHHH
Q 038553 9 SDLLLKSNPIYKKVPVLLHDGKPLCESTVIVNY 41 (161)
Q Consensus 9 ~~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~y 41 (161)
.+++.++++. .++|++..+|..+.++..|.+.
T Consensus 39 ~~~l~~~~~~-~~~P~~~~~~~~igg~~~~~~~ 70 (72)
T cd02066 39 REELKELSGW-PTVPQIFINGEFIGGYDDLKAL 70 (72)
T ss_pred HHHHHHHhCC-CCcCEEEECCEEEecHHHHHHh
Confidence 3567778997 8999999999999998887764
No 117
>PF09635 MetRS-N: MetRS-N binding domain; InterPro: IPR018285 This entry represents the N-terminal domain of methionyl-tRNA synthetase (MetRS). This N-terminal appended domain mediates non-catalytic complex formation through its interaction with a domain in the tRNA aminoacylation cofactor Arc1p. The interacting domains of MetRS, GluRS (glutamyl-tRNA synthetase) and Arc1p form a ternary complex resembling a classical GST homo-dimer []. Domain-swapping between symmetrically related MetRS-N and Arc1p-N domains generates a 2:2 tetramer held together by van der Waals forces. This domain is necessary for formation of the aminoacyl-tRNA synthetase complex necessary for tRNA nuclear export and shuttling as part of the translational apparatus. ; PDB: 2HSN_A.
Probab=88.12 E-value=0.45 Score=31.06 Aligned_cols=33 Identities=27% Similarity=0.430 Sum_probs=15.9
Q ss_pred hhCCCCCccceEEe--CCeecccHHHHHHHHHhhCC
Q 038553 14 KSNPIYKKVPVLLH--DGKPLCESTVIVNYIDETWP 47 (161)
Q Consensus 14 ~~np~~~~vP~L~~--~~~~l~eS~~I~~yl~~~~~ 47 (161)
++|.- ..-|-|.+ +|+.++|++||++|+.+-|.
T Consensus 29 ~v~ed-~~~~~L~~~~~gF~L~e~NAIvrYl~nDF~ 63 (122)
T PF09635_consen 29 EVNED-ESGPLLKDKKSGFELFEPNAIVRYLANDFE 63 (122)
T ss_dssp EE-SS---S--EEE-S--S----HHHHHHHHTT--T
T ss_pred eeCCc-cccceeeecCCceEEecccHHHHHHHhhcC
Confidence 45555 56688853 68999999999999999876
No 118
>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou
Probab=86.53 E-value=0.71 Score=26.28 Aligned_cols=25 Identities=28% Similarity=0.328 Sum_probs=19.7
Q ss_pred ChhhhhhCCCCCccceEEeCCeeccc
Q 038553 9 SDLLLKSNPIYKKVPVLLHDGKPLCE 34 (161)
Q Consensus 9 ~~~~~~~np~~~~vP~L~~~~~~l~e 34 (161)
.++|.+.||. +++|++.++|..+..
T Consensus 39 ~~~~~~~~~~-~~vP~i~~~~~~i~g 63 (73)
T cd02976 39 LEELKKLNGY-RSVPVVVIGDEHLSG 63 (73)
T ss_pred HHHHHHHcCC-cccCEEEECCEEEec
Confidence 3577888998 999999988766543
No 119
>TIGR02183 GRXA Glutaredoxin, GrxA family. This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.
Probab=79.97 E-value=3 Score=25.21 Aligned_cols=28 Identities=21% Similarity=0.343 Sum_probs=25.4
Q ss_pred CccceEEeCCeecccHHHHHHHHHhhCC
Q 038553 20 KKVPVLLHDGKPLCESTVIVNYIDETWP 47 (161)
Q Consensus 20 ~~vP~L~~~~~~l~eS~~I~~yl~~~~~ 47 (161)
..||.+..||..+.++..|..++.++++
T Consensus 56 ~tVP~ifi~g~~igG~~dl~~~~~~~~~ 83 (86)
T TIGR02183 56 ETVPQIFVDEKHVGGCTDFEQLVKENFD 83 (86)
T ss_pred CCcCeEEECCEEecCHHHHHHHHHhccc
Confidence 4899999999999999999999998765
No 120
>PRK11200 grxA glutaredoxin 1; Provisional
Probab=77.26 E-value=4.7 Score=24.13 Aligned_cols=28 Identities=25% Similarity=0.372 Sum_probs=25.2
Q ss_pred CccceEEeCCeecccHHHHHHHHHhhCC
Q 038553 20 KKVPVLLHDGKPLCESTVIVNYIDETWP 47 (161)
Q Consensus 20 ~~vP~L~~~~~~l~eS~~I~~yl~~~~~ 47 (161)
..||.+..||..+.....|.+++.+.++
T Consensus 57 ~~vP~ifi~g~~igg~~~~~~~~~~~~~ 84 (85)
T PRK11200 57 ETVPQIFVDQKHIGGCTDFEAYVKENLG 84 (85)
T ss_pred CcCCEEEECCEEEcCHHHHHHHHHHhcc
Confidence 4799999999999999999999988765
No 121
>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions. GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.
Probab=73.71 E-value=5.7 Score=22.94 Aligned_cols=30 Identities=17% Similarity=0.100 Sum_probs=23.2
Q ss_pred ChhhhhhCCCCCccceEEeCCeecccHHHHH
Q 038553 9 SDLLLKSNPIYKKVPVLLHDGKPLCESTVIV 39 (161)
Q Consensus 9 ~~~~~~~np~~~~vP~L~~~~~~l~eS~~I~ 39 (161)
.+++.++++. .++|++..+|..+..-....
T Consensus 40 ~~el~~~~g~-~~vP~v~i~~~~iGg~~~~~ 69 (73)
T cd03027 40 KAELEERTGS-SVVPQIFFNEKLVGGLTDLK 69 (73)
T ss_pred HHHHHHHhCC-CCcCEEEECCEEEeCHHHHH
Confidence 3578889998 89999999888877654443
No 122
>TIGR02200 GlrX_actino Glutaredoxin-like protein. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.
Probab=66.64 E-value=3.6 Score=23.69 Aligned_cols=24 Identities=29% Similarity=0.351 Sum_probs=17.5
Q ss_pred hhhhhhC-CCCCccceEE-eCCeeccc
Q 038553 10 DLLLKSN-PIYKKVPVLL-HDGKPLCE 34 (161)
Q Consensus 10 ~~~~~~n-p~~~~vP~L~-~~~~~l~e 34 (161)
+++.++| +. ..||++. ++|..+.+
T Consensus 40 ~~~~~~~~~~-~~vP~i~~~~g~~l~~ 65 (77)
T TIGR02200 40 DRVVSVNNGN-MTVPTVKFADGSFLTN 65 (77)
T ss_pred HHHHHHhCCC-ceeCEEEECCCeEecC
Confidence 4556776 87 8999997 67766654
No 123
>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes
Probab=66.26 E-value=9.7 Score=22.20 Aligned_cols=32 Identities=16% Similarity=0.185 Sum_probs=25.9
Q ss_pred hhhhCCCCCccceEEeCCeecccHHHHHHHHHh
Q 038553 12 LLKSNPIYKKVPVLLHDGKPLCESTVIVNYIDE 44 (161)
Q Consensus 12 ~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~~ 44 (161)
+.+++.. ..+|.+..+|..+.++..|.++..+
T Consensus 45 ~~~~~g~-~~~P~v~~~g~~igg~~~~~~~~~~ 76 (82)
T cd03419 45 LQELTGQ-RTVPNVFIGGKFIGGCDDLMALHKS 76 (82)
T ss_pred HHHHhCC-CCCCeEEECCEEEcCHHHHHHHHHc
Confidence 4456665 7899999999999999988888755
No 124
>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i
Probab=65.99 E-value=12 Score=21.41 Aligned_cols=31 Identities=6% Similarity=0.098 Sum_probs=22.9
Q ss_pred hhhhCCCCC-ccceEEeCCeecccHHHHHHHHH
Q 038553 12 LLKSNPIYK-KVPVLLHDGKPLCESTVIVNYID 43 (161)
Q Consensus 12 ~~~~np~~~-~vP~L~~~~~~l~eS~~I~~yl~ 43 (161)
+...... . .||++..+|..+.....+.++-.
T Consensus 42 ~~~~~~~-~~~vP~v~i~g~~igg~~~~~~~~~ 73 (75)
T cd03418 42 MINRSGG-RRTVPQIFIGDVHIGGCDDLYALER 73 (75)
T ss_pred HHHHhCC-CCccCEEEECCEEEeChHHHHHHHh
Confidence 3344443 4 89999999999998888877653
No 125
>TIGR02181 GRX_bact Glutaredoxin, GrxC family. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.
Probab=65.66 E-value=13 Score=21.71 Aligned_cols=34 Identities=12% Similarity=0.150 Sum_probs=25.5
Q ss_pred hhhhhhCCCCCccceEEeCCeecccHHHHHHHHHh
Q 038553 10 DLLLKSNPIYKKVPVLLHDGKPLCESTVIVNYIDE 44 (161)
Q Consensus 10 ~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~~ 44 (161)
+++.+.... ..+|++..+|..+.....+..+..+
T Consensus 39 ~~~~~~~g~-~~vP~i~i~g~~igg~~~~~~~~~~ 72 (79)
T TIGR02181 39 DEMMQRSGR-RTVPQIFIGDVHVGGCDDLYALDRE 72 (79)
T ss_pred HHHHHHhCC-CCcCEEEECCEEEcChHHHHHHHHc
Confidence 345556666 7999999999988887777776554
No 126
>PF11417 Inhibitor_G39P: Loader and inhibitor of phage G40P; InterPro: IPR024424 G39P inhibits the initiation of DNA replication by blocking G40P replicative helicase. G39P has a bipartite stricture consisting of a folded N-terminal domain and an unfolded C-terminal domain. The C-terminal is essential for helicase interaction [].; PDB: 1NO1_B.
Probab=65.23 E-value=26 Score=20.61 Aligned_cols=37 Identities=16% Similarity=0.492 Sum_probs=24.7
Q ss_pred ccHHHHHHHHHhhCC--CCCCCCCCHHHHHHHHHHHHHHhh
Q 038553 33 CESTVIVNYIDETWP--SPPLLPSCASERAKARFWADFIDK 71 (161)
Q Consensus 33 ~eS~~I~~yl~~~~~--~~~l~p~~~~~~~~~~~~~~~~~~ 71 (161)
.|..-|+.++...|| ...+.+.+ .+..++.|.+.+.+
T Consensus 4 ~E~~~ll~~I~~aYP~~~~~f~~~~--~k~~v~~W~~~L~d 42 (71)
T PF11417_consen 4 EETAKLLKLIKAAYPQWAGNFKPTD--SKETVDLWYDMLKD 42 (71)
T ss_dssp HHHHHHHHHHHHHST---TT---ST--HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHCCcchhccchhh--HHHHHHHHHHHHHh
Confidence 367789999999999 23344444 45678888887765
No 127
>TIGR02180 GRX_euk Glutaredoxin. This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.
Probab=61.46 E-value=17 Score=21.18 Aligned_cols=32 Identities=16% Similarity=0.241 Sum_probs=24.7
Q ss_pred hhhhCCCCCccceEEeCCeecccHHHHHHHHHh
Q 038553 12 LLKSNPIYKKVPVLLHDGKPLCESTVIVNYIDE 44 (161)
Q Consensus 12 ~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl~~ 44 (161)
+...... ..+|.+..+|..+.++..+.++..+
T Consensus 46 l~~~~g~-~~vP~v~i~g~~igg~~~~~~~~~~ 77 (84)
T TIGR02180 46 LEEITGQ-RTVPNIFINGKFIGGCSDLLALYKS 77 (84)
T ss_pred HHHHhCC-CCCCeEEECCEEEcCHHHHHHHHHc
Confidence 4455665 6899999999999998888877654
No 128
>PRK10329 glutaredoxin-like protein; Provisional
Probab=54.77 E-value=9.5 Score=22.82 Aligned_cols=18 Identities=11% Similarity=0.418 Sum_probs=13.6
Q ss_pred hhCCCCCccceEEeCCeec
Q 038553 14 KSNPIYKKVPVLLHDGKPL 32 (161)
Q Consensus 14 ~~np~~~~vP~L~~~~~~l 32 (161)
..++. .+||+++.++..+
T Consensus 44 ~~~g~-~~vPvv~i~~~~~ 61 (81)
T PRK10329 44 RAQGF-RQLPVVIAGDLSW 61 (81)
T ss_pred HHcCC-CCcCEEEECCEEE
Confidence 34687 8999999877554
No 129
>TIGR02681 phage_pRha phage regulatory protein, rha family. Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that pRha is a phage regulatory protein.
Probab=47.11 E-value=22 Score=22.73 Aligned_cols=26 Identities=8% Similarity=0.243 Sum_probs=21.6
Q ss_pred cceEE-eCCeecccHHHHHHHHHhhCC
Q 038553 22 VPVLL-HDGKPLCESTVIVNYIDETWP 47 (161)
Q Consensus 22 vP~L~-~~~~~l~eS~~I~~yl~~~~~ 47 (161)
+|.+. .+|.+++.|..|+++...++.
T Consensus 2 ~~~v~~~~~~~~ttS~~IAe~fgK~H~ 28 (108)
T TIGR02681 2 FPKVFTKRNQVVTDSLTMAQMFGKRHD 28 (108)
T ss_pred CceEEEECCEEEEeHHHHHHHHCcchH
Confidence 35555 789999999999999988765
No 130
>PRK15371 effector protein YopJ; Provisional
Probab=45.58 E-value=57 Score=24.83 Aligned_cols=51 Identities=14% Similarity=0.279 Sum_probs=39.7
Q ss_pred hhHHHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhhhhCCCCc
Q 038553 90 TAKNEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWFYAVEKFGGFKV 142 (161)
Q Consensus 90 ~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~~~~~~~ 142 (161)
...+++...++.||+.+.++.|+ -+.++..|+-..+.+.-.. ..++|++++
T Consensus 23 ~~~~~L~~~i~~le~~~~~G~~~-~~~~~~~Di~~lp~lv~~~-N~r~P~LNL 73 (287)
T PRK15371 23 ISNEELKNIITQLEDDIADGSWI-HKNYARTDLEVMPALVAQA-NNKYPEMNL 73 (287)
T ss_pred hhHHHHHHHHHHHHHHHHcCCCC-CchhHHhhHHhhHHHHHHH-hccCCCCCe
Confidence 45677999999999999998888 4669999998888654322 236888876
No 131
>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=43.54 E-value=25 Score=20.94 Aligned_cols=24 Identities=17% Similarity=0.349 Sum_probs=16.9
Q ss_pred hhh-hhCCCCCccceEEeCCeecccH
Q 038553 11 LLL-KSNPIYKKVPVLLHDGKPLCES 35 (161)
Q Consensus 11 ~~~-~~np~~~~vP~L~~~~~~l~eS 35 (161)
++. ..++. .+||.+..|+..+...
T Consensus 43 ~~~~~~~g~-~tvP~I~i~~~~igg~ 67 (80)
T COG0695 43 EMVKRGKGQ-RTVPQIFIGGKHVGGC 67 (80)
T ss_pred HHHHHhCCC-CCcCEEEECCEEEeCc
Confidence 444 44587 8999999888666543
No 132
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=41.34 E-value=57 Score=19.67 Aligned_cols=30 Identities=13% Similarity=0.190 Sum_probs=22.2
Q ss_pred hhhhCCCCCccceEEeCCeecccHHHHHHHH
Q 038553 12 LLKSNPIYKKVPVLLHDGKPLCESTVIVNYI 42 (161)
Q Consensus 12 ~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl 42 (161)
+.+.+.. .++|.+..+|..+.....+....
T Consensus 55 l~~~~g~-~tvP~vfi~g~~iGG~~~l~~l~ 84 (90)
T cd03028 55 LKEYSNW-PTFPQLYVNGELVGGCDIVKEMH 84 (90)
T ss_pred HHHHhCC-CCCCEEEECCEEEeCHHHHHHHH
Confidence 3445665 68999998888888877777654
No 133
>PF03421 YopJ: YopJ Serine/Threonine acetyltransferase; InterPro: IPR005083 The infection of mammalian host cells by Yersinia sp. causes a rapid induction of the mitogen-activated protein kinase (MAPK; including the ERK, JNK and p38 pathways) and nuclear factor kappaB (NF-kappaB) signalling pathways that would typically result in cytokine production and initiation of the innate immune response. However, these pathways are rapidly inhibited promoting apoptosis. YopJ has been shown to block phosphorylation of active site residues []. It has also been shown that YopJ acetyltransferase is activated by eukaryotic host cell inositol hexakisphosphate []. Serine and threonine acetylation is yet another complication to the control of signalling pathways and may be a may be a widespread mode of biochemical regulation of endogenous processes in eukaryotic cells. It has been shown that YopJ is a serine/threonine acetyltransferase []. It acetylates the serine and threonine residues in the phosphorylation sites of MAPK kinases and nuclear factor kappaB, preventing their activation by phosphorylation and the inhibition of these signalling pathways []. This entry contains YopJ and related proteins.
Probab=39.62 E-value=85 Score=21.98 Aligned_cols=48 Identities=13% Similarity=0.289 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHhCCCCcccCCCCChhHHhHHHHHHHHHHhhhhCCCCc
Q 038553 93 NEFIEILKQLVGALGEKDFFGGDSFGFVDVIAIPLTCWFYAVEKFGGFKV 142 (161)
Q Consensus 93 ~~~~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l~~~~~~~~~~~~~~ 142 (161)
+.+....+.+++.+..+.|+ ...++..|+-..+.+--.. ..++|++.+
T Consensus 2 ~~L~~y~~~~~~~~~~g~~~-~~~~~~~D~~~lp~lv~~~-N~r~P~LnL 49 (177)
T PF03421_consen 2 ESLKEYIERLEDDIKNGSWP-NESYAELDIKMLPALVAAE-NARYPGLNL 49 (177)
T ss_pred hHHHHHHHHHHHHHHhCCCC-CcchhhhhHHHHHHHHHHH-hhcCCCCce
Confidence 45778888999999989988 6789999998888654322 246788776
No 134
>PHA03050 glutaredoxin; Provisional
Probab=36.77 E-value=61 Score=20.55 Aligned_cols=30 Identities=10% Similarity=0.182 Sum_probs=22.9
Q ss_pred hhhhhhCCCCCccceEEeCCeecccHHHHHH
Q 038553 10 DLLLKSNPIYKKVPVLLHDGKPLCESTVIVN 40 (161)
Q Consensus 10 ~~~~~~np~~~~vP~L~~~~~~l~eS~~I~~ 40 (161)
.++.+++.. .+||.+..+|..+.....+..
T Consensus 59 ~~l~~~tG~-~tVP~IfI~g~~iGG~ddl~~ 88 (108)
T PHA03050 59 DYFEQITGG-RTVPRIFFGKTSIGGYSDLLE 88 (108)
T ss_pred HHHHHHcCC-CCcCEEEECCEEEeChHHHHH
Confidence 456677776 799999999988877666655
No 135
>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....
Probab=34.85 E-value=37 Score=18.50 Aligned_cols=23 Identities=26% Similarity=0.443 Sum_probs=15.9
Q ss_pred ChhhhhhCCCCCccceEEeCCeec
Q 038553 9 SDLLLKSNPIYKKVPVLLHDGKPL 32 (161)
Q Consensus 9 ~~~~~~~np~~~~vP~L~~~~~~l 32 (161)
.+++.+.+.. .++|.+..||..+
T Consensus 38 ~~~l~~~~g~-~~~P~v~i~g~~I 60 (60)
T PF00462_consen 38 REELKELSGV-RTVPQVFIDGKFI 60 (60)
T ss_dssp HHHHHHHHSS-SSSSEEEETTEEE
T ss_pred HHHHHHHcCC-CccCEEEECCEEC
Confidence 3455556565 7999999888653
No 136
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=32.57 E-value=28 Score=25.47 Aligned_cols=33 Identities=27% Similarity=0.323 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhCCCCcccCCCCChhHHhHHHHH
Q 038553 96 IEILKQLVGALGEKDFFGGDSFGFVDVIAIPLT 128 (161)
Q Consensus 96 ~~~l~~le~~L~~~~~l~G~~~t~aD~~~~~~l 128 (161)
.+.++.++..|.++.|.-|.+++-.|+.+|..+
T Consensus 10 ~~glk~l~~sLA~ks~~~g~~~s~edv~vf~al 42 (231)
T KOG1668|consen 10 PAGLKKLNKSLAEKSYIEGYQLSKEDVVVFAAL 42 (231)
T ss_pred hhhhhhhhHhhhcccCCCCCCcccccceeehhc
Confidence 567889999999999999999999999998876
No 137
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=31.56 E-value=1e+02 Score=19.57 Aligned_cols=41 Identities=15% Similarity=0.094 Sum_probs=26.1
Q ss_pred CCCCCCCChhhhh----hCCCCCccceEEeCCeecccHHHHHHHHH
Q 038553 2 ENLFGGKSDLLLK----SNPIYKKVPVLLHDGKPLCESTVIVNYID 43 (161)
Q Consensus 2 e~~~~~~~~~~~~----~np~~~~vP~L~~~~~~l~eS~~I~~yl~ 43 (161)
|.|-.....++.+ +.-. .+||.+..+|..+..+..++++-.
T Consensus 45 ELD~~~~g~eiq~~l~~~tg~-~tvP~vFI~Gk~iGG~~dl~~lh~ 89 (104)
T KOG1752|consen 45 ELDEDEDGSEIQKALKKLTGQ-RTVPNVFIGGKFIGGASDLMALHK 89 (104)
T ss_pred EccCCCCcHHHHHHHHHhcCC-CCCCEEEECCEEEcCHHHHHHHHH
Confidence 3444444444442 3444 589999998888887777776653
No 138
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=30.63 E-value=1.1e+02 Score=18.89 Aligned_cols=30 Identities=17% Similarity=0.161 Sum_probs=22.0
Q ss_pred hhhhCCCCCccceEEeCCeecccHHHHHHHH
Q 038553 12 LLKSNPIYKKVPVLLHDGKPLCESTVIVNYI 42 (161)
Q Consensus 12 ~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl 42 (161)
+...+.. .+||.+..+|..+.....+....
T Consensus 53 l~~~tg~-~tvP~Vfi~g~~iGG~ddl~~l~ 82 (99)
T TIGR02189 53 LSRLGCS-PAVPAVFVGGKLVGGLENVMALH 82 (99)
T ss_pred HHHhcCC-CCcCeEEECCEEEcCHHHHHHHH
Confidence 4445666 79999999998888776666543
No 139
>cd05142 Barstar Barstar is an intracellular inhibitor of barnase, an extracellular ribonuclease of Bacillus amyloliquefaciens. Barstar binds tightly to the barnase active site and sterically blocks it thus inhibiting its potentially lethal RNase activity inside the cell. Barstar also binds and inhibits a ribonuclease called RNase Sa (produced by Streptomyces aureofaciens) which belongs to the same enzyme family as does barnase.
Probab=30.00 E-value=1.3e+02 Score=18.24 Aligned_cols=31 Identities=10% Similarity=0.174 Sum_probs=24.1
Q ss_pred EEeCCeecccHHHHHHHHHhhCCCCCCCCCC
Q 038553 25 LLHDGKPLCESTVIVNYIDETWPSPPLLPSC 55 (161)
Q Consensus 25 L~~~~~~l~eS~~I~~yl~~~~~~~~l~p~~ 55 (161)
+..|+..+..-....+.+.+.++-|.+++.+
T Consensus 2 i~iDg~~i~~~~~f~~~l~~~~~~p~~~G~N 32 (87)
T cd05142 2 VVIDGEEIRSIEDLHQILKKELALPEYYGEN 32 (87)
T ss_pred EEEECccCCCHHHHHHHHHHHhCCchhcCCC
Confidence 3456667778889999999998877778765
No 140
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=28.58 E-value=45 Score=23.55 Aligned_cols=18 Identities=28% Similarity=0.525 Sum_probs=16.8
Q ss_pred eecccHHHHHHHHHhhCC
Q 038553 30 KPLCESTVIVNYIDETWP 47 (161)
Q Consensus 30 ~~l~eS~~I~~yl~~~~~ 47 (161)
.+|+||..|-+|+.++|+
T Consensus 156 ~lIaDs~~I~~y~~~~y~ 173 (185)
T PF09314_consen 156 RLIADSKGIQDYIKERYG 173 (185)
T ss_pred EEEEcCHHHHHHHHHHcC
Confidence 489999999999999998
No 141
>PF08986 DUF1889: Domain of unknown function (DUF1889); InterPro: IPR015079 This family consist of hypothetical bacterial proteins. ; PDB: 2JN8_A 2ES9_A.
Probab=28.57 E-value=1.4e+02 Score=18.74 Aligned_cols=42 Identities=26% Similarity=0.349 Sum_probs=20.8
Q ss_pred eecccHHH--HHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHhhhh
Q 038553 30 KPLCESTV--IVNYIDETWPSPPLLPSCASERAKARFWADFIDKKV 73 (161)
Q Consensus 30 ~~l~eS~~--I~~yl~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~ 73 (161)
..+.||++ |+.||.+..- +-.+.+...|.....|-.-....+
T Consensus 43 ~sMdESTAKGi~KyL~elGv--Pasa~dv~aRg~qeGWn~gFT~k~ 86 (119)
T PF08986_consen 43 HSMDESTAKGIFKYLKELGV--PASAADVTARGEQEGWNPGFTEKV 86 (119)
T ss_dssp -HCCCHHHHHHHHHHHHCT------HHHHHHHHHHCT--HHHHHHH
T ss_pred CccchHHHHHHHHHHHHcCC--CCCHHHHHHhcccccCChhHHHHH
Confidence 45677776 9999988632 122333445555555544444333
No 142
>TIGR01764 excise DNA binding domain, excisionase family. An excisionase, or Xis protein, is a small protein that binds and promotes excisive recombination; it is not enzymatically active. This model represents a number of putative excisionases and related proteins from temperate phage, plasmids, and transposons, as well as DNA binding domains of other proteins, such as a DNA modification methylase. This model identifies mostly small proteins and N-terminal regions of large proteins, but some proteins appear to have two copies. This domain appears similar, in both sequence and predicted secondary structure (PSIPRED) to the MerR family of transcriptional regulators (pfam00376).
Probab=27.47 E-value=93 Score=15.61 Aligned_cols=24 Identities=8% Similarity=0.133 Sum_probs=18.8
Q ss_pred CccceEEeCCeecccHHHHHHHHH
Q 038553 20 KKVPVLLHDGKPLCESTVIVNYID 43 (161)
Q Consensus 20 ~~vP~L~~~~~~l~eS~~I~~yl~ 43 (161)
|.+|....|+..+.....|.+|++
T Consensus 25 g~i~~~~~g~~~~~~~~~l~~~~~ 48 (49)
T TIGR01764 25 GELPAYRVGRHYRIPREDVDEYLE 48 (49)
T ss_pred CCCCeEEeCCeEEEeHHHHHHHHh
Confidence 678887777877888888888775
No 143
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=27.24 E-value=1.3e+02 Score=18.48 Aligned_cols=30 Identities=13% Similarity=0.237 Sum_probs=21.3
Q ss_pred hhhhCCCCCccceEEeCCeecccHHHHHHHH
Q 038553 12 LLKSNPIYKKVPVLLHDGKPLCESTVIVNYI 42 (161)
Q Consensus 12 ~~~~np~~~~vP~L~~~~~~l~eS~~I~~yl 42 (161)
+...+.. .+||.+..+|..+.....+....
T Consensus 59 l~~~tg~-~tvP~vfi~g~~iGG~ddl~~l~ 88 (97)
T TIGR00365 59 IKEYSNW-PTIPQLYVKGEFVGGCDIIMEMY 88 (97)
T ss_pred HHHHhCC-CCCCEEEECCEEEeChHHHHHHH
Confidence 3345666 68999998888877766666543
No 144
>PF00392 GntR: Bacterial regulatory proteins, gntR family; InterPro: IPR000524 Many bacterial transcription regulation proteins bind DNA through a helix-turn-helix (HTH) motif, which can be classified into subfamilies on the basis of sequence similarities. The HTH GntR family has many members distributed among diverse bacterial groups that regulate various biological processes. It was named GntR after the Bacillus subtilis repressor of the gluconate operon []. Family members include GntR, HutC, KorA, NtaR, FadR, ExuR, FarR, DgoR and PhnF. The crystal structure of the FadR protein has been determined []. In general, these proteins contain a DNA-binding HTH domain at the N terminus, and an effector-binding or oligomerisation domain at the C terminus (IPR011711 from INTERPRO). The DNA-binding domain is well conserved in structure for the whole of the GntR family, consisting of a 3-helical bundle core with a small beta-sheet (wing); the GntR winged helix structure is similar to that found in several other transcriptional regulator families. The regions outside the DNA-binding domain are more variable and are consequently used to define GntR subfamilies []. This entry represents the N-terminal DNA-binding domain of the GntR family.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 1HW1_B 1H9T_A 1HW2_A 1H9G_A 1E2X_A 3IHU_A 3C7J_A 2RA5_A 3BY6_C 3IC7_A ....
Probab=26.01 E-value=81 Score=17.53 Aligned_cols=31 Identities=19% Similarity=0.101 Sum_probs=21.4
Q ss_pred HHHHHHHHHHhCCCCcccCCCC-ChhHHhHHH
Q 038553 96 IEILKQLVGALGEKDFFGGDSF-GFVDVIAIP 126 (161)
Q Consensus 96 ~~~l~~le~~L~~~~~l~G~~~-t~aD~~~~~ 126 (161)
....+.+...+..+.|-.|+.+ |..+++---
T Consensus 3 ~~i~~~l~~~I~~g~~~~g~~lps~~~la~~~ 34 (64)
T PF00392_consen 3 EQIYDQLRQAILSGRLPPGDRLPSERELAERY 34 (64)
T ss_dssp HHHHHHHHHHHHTTSS-TTSBE--HHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCEeCCHHHHHHHh
Confidence 3456677777777889999998 999886543
No 145
>PF12290 DUF3802: Protein of unknown function (DUF3802); InterPro: IPR020979 This family of proteins is found in bacteria and are typically between 114 and 143 amino acids in length. There is a conserved KNLFD sequence motif. The annotation with this family suggests that it may be the B subunit of bacterial type IIA DNA topoisomerase but there is no evidence to support this annotation.
Probab=25.96 E-value=48 Score=21.36 Aligned_cols=85 Identities=13% Similarity=0.164 Sum_probs=45.0
Q ss_pred HHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHhhhhhhhhhhhhhcCC----CchhhhHHHHHHHHHHHHHHhCCCCc
Q 038553 36 TVIVNYIDETWPSPPLLPSCASERAKARFWADFIDKKVIDAVCNIWKSKG----KVPGTAKNEFIEILKQLVGALGEKDF 111 (161)
Q Consensus 36 ~~I~~yl~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~le~~L~~~~~ 111 (161)
.++++||.+..+ +|-.......-.....+...+.+...+..+..-.+ ..+-...+.......-|+..|+ +-|
T Consensus 9 ~~LI~yLte~L~---lFe~~~~~~~~~~Tv~d~vee~ia~~im~vc~Qnp~L~~~~R~~iirE~Daiv~DLeEVLa-~V~ 84 (113)
T PF12290_consen 9 DALIEYLTENLS---LFESSQSGDTGDETVEDVVEEQIASQIMAVCEQNPELEFSQRFQIIREADAIVYDLEEVLA-SVW 84 (113)
T ss_pred HHHHHHHHHhHH---HhcCCCCCCcccchHHHHHHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 578899998876 43311111112223334444444444444433222 2344466777778888888886 344
Q ss_pred ccCCCCChhHHhHHH
Q 038553 112 FGGDSFGFVDVIAIP 126 (161)
Q Consensus 112 l~G~~~t~aD~~~~~ 126 (161)
+..+|-.-+.+..
T Consensus 85 --~~~aT~eQ~~Fi~ 97 (113)
T PF12290_consen 85 --NQKATNEQIAFIE 97 (113)
T ss_pred --cCCCCHHHHHHHH
Confidence 4567766665543
No 146
>TIGR03396 PC_PLC phospholipase C, phosphocholine-specific, Pseudomonas-type. Members of this protein family are bacterial, phosphatidylcholine-hydrolyzing phospholipase C enzymes, with a characteristic domain architecture as found in hemolytyic (PlcH) and nonhemolytic (PlcN) secreted enzymes of Pseudomonas aeruginosa. PlcH hydrolyzes phosphatidylcholine to diacylglycerol and phosphocholine, but unlike PlcN can also hydrolyze sphingomyelin to ceramide ((N-acylsphingosine)) and phosphocholine. Members of this family share the twin-arginine signal sequence for Sec-independent transport across the plasma membrane. PlcH is secreted as a heterodimer with a small chaperone, PlcR, encoded immediately downstream.
Probab=25.33 E-value=93 Score=26.88 Aligned_cols=28 Identities=14% Similarity=0.538 Sum_probs=23.3
Q ss_pred CccceEEeC-----C---eecccHHHHHHHHHhhCC
Q 038553 20 KKVPVLLHD-----G---KPLCESTVIVNYIDETWP 47 (161)
Q Consensus 20 ~~vP~L~~~-----~---~~l~eS~~I~~yl~~~~~ 47 (161)
.+||+|+.. | ..+.|-..|+++|+++++
T Consensus 390 ~RVP~iVISPwsrgG~V~s~~~DHtSvLrflE~~fg 425 (690)
T TIGR03396 390 PRVPMYVISPWSKGGWVNSQVFDHTSVLRFLEKRFG 425 (690)
T ss_pred ceeeEEEECCCCCCCcccCccccHHHHHHHHHHHhC
Confidence 489999863 3 457889999999999998
No 147
>COG3646 Uncharacterized phage-encoded protein [Function unknown]
Probab=25.24 E-value=2e+02 Score=20.03 Aligned_cols=29 Identities=17% Similarity=0.261 Sum_probs=21.6
Q ss_pred CchhhhHHHHHHHHHHHHHHhCCCCcccC
Q 038553 86 KVPGTAKNEFIEILKQLVGALGEKDFFGG 114 (161)
Q Consensus 86 ~~~~~~~~~~~~~l~~le~~L~~~~~l~G 114 (161)
+.......++-+.++.+|..|...++..+
T Consensus 87 ~k~~~Fk~~~VkrF~Eme~~l~~~~~~~~ 115 (167)
T COG3646 87 EKVRQFKAALVKRFDEMEEALAERAFARA 115 (167)
T ss_pred chhhhHHHHHHHHHHHHHHHHHhhhhhHH
Confidence 44566777888889999998877776554
No 148
>PF09849 DUF2076: Uncharacterized protein conserved in bacteria (DUF2076); InterPro: IPR018648 This family of hypothetical prokaryotic proteins has no known function but includes putative perimplasmic ligand-binding sensor proteins.
Probab=23.14 E-value=3.2e+02 Score=20.34 Aligned_cols=66 Identities=11% Similarity=-0.032 Sum_probs=36.5
Q ss_pred HHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCCchhhhHHHHHHHHHHHHHHh
Q 038553 35 STVIVNYIDETWPSPPLLPSCASERAKARFWADFIDKKVIDAVCNIWKSKGKVPGTAKNEFIEILKQLVGAL 106 (161)
Q Consensus 35 S~~I~~yl~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L 106 (161)
-..|-..+.+.-. ..--|+++...+.|...+.-.=+..+.....+ -..+.+++++..-++.||.+|
T Consensus 6 ~qLI~~lf~RL~~-ae~~prD~eAe~lI~~~~~~qP~A~Y~laQ~v-----lvQE~AL~~a~~ri~eLe~ql 71 (247)
T PF09849_consen 6 RQLIDDLFSRLKQ-AEAQPRDPEAEALIAQALARQPDAPYYLAQTV-----LVQEQALKQAQARIQELEAQL 71 (247)
T ss_pred HHHHHHHHHHHHh-ccCCCCCHHHHHHHHHHHHhCCchHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444432 22237887665555554443333222222222 245778888889999999987
No 149
>TIGR02194 GlrX_NrdH Glutaredoxin-like protein NrdH. NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.
Probab=22.97 E-value=52 Score=18.74 Aligned_cols=14 Identities=36% Similarity=0.831 Sum_probs=10.5
Q ss_pred hCCCCCccceEEeCC
Q 038553 15 SNPIYKKVPVLLHDG 29 (161)
Q Consensus 15 ~np~~~~vP~L~~~~ 29 (161)
..+. ..||+++.+|
T Consensus 43 ~~g~-~~vP~v~~~g 56 (72)
T TIGR02194 43 AQGF-RQVPVIVADG 56 (72)
T ss_pred HcCC-cccCEEEECC
Confidence 4575 7999999755
No 150
>PF09098 Dehyd-heme_bind: Quinohemoprotein amine dehydrogenase A, alpha subunit, haem binding; InterPro: IPR015182 Quinohemoprotein amine dehydrogenases (QHNDH) 1.4.99 from EC) are enzymes produced in the periplasmic space of certain Gram-negative bacteria, such as Paracoccus denitrificans and Pseudomonas putida, in response to primary amines, including n-butylamine and benzylamine. QHNDH catalyses the oxidative deamination of a wide range of aliphatic and aromatic amines through formation of a Schiff-base intermediate involving one of the quinone O atoms []. Catalysis requires the presence of a novel redox cofactor, cysteine tryptophylquinone (CTQ). CTQ is derived from the post-translational modification of specific residues, which involves the oxidation of the indole ring of a tryptophan residue to form tryptophylquinone, followed by covalent cross-linking with a cysteine residue []. There is one CTQ per subunit in QHNDH. In addition to CTQ, two haem c cofactors are present in QHNDH that mediate the transfer of the substrate-derived electrons from CTQ to an external electron acceptor, cytochrome c-550 [, ]. QHNDH is a heterotrimer of alpha, beta and gamma subunits. The alpha and beta subunits contain signal peptides necessary for the translocation of QHNDH to the periplasm. The alpha subunit is composed of four domains - domain 1 forming a dihaem cytochrome, and domains 2-4 forming antiparallel beta-barrel structures; the beta subunit is a 7-bladed beta-propeller that provides part of the active site; and the small, catalytic gamma subunit contains the novel cross-linked CTQ cofactor, in addition to additional thioester cross-links between Cys and Asp/Glu residues that encage CTQ. The gamma subunit assumes a globular secondary structure with two short alpha-helices having many turns and bends []. This entry represents the dihaem cytochrome c domain of the QHNDH alpha subunit. The domain contain two cysteine residues that are involved in thioether linkages to haem []. ; PDB: 1PBY_A 1JJU_A 1JMZ_A 1JMX_A.
Probab=22.84 E-value=62 Score=22.45 Aligned_cols=14 Identities=29% Similarity=0.520 Sum_probs=12.1
Q ss_pred cHHHHHHHHHhhCC
Q 038553 34 ESTVIVNYIDETWP 47 (161)
Q Consensus 34 eS~~I~~yl~~~~~ 47 (161)
|-.+|++||++.+|
T Consensus 55 er~avVkYLAd~~G 68 (167)
T PF09098_consen 55 ERRAVVKYLADTQG 68 (167)
T ss_dssp HHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHccC
Confidence 67899999999998
No 151
>PF12728 HTH_17: Helix-turn-helix domain
Probab=21.24 E-value=1.4e+02 Score=15.50 Aligned_cols=26 Identities=12% Similarity=0.142 Sum_probs=20.6
Q ss_pred CccceEEeCCeecccHHHHHHHHHhh
Q 038553 20 KKVPVLLHDGKPLCESTVIVNYIDET 45 (161)
Q Consensus 20 ~~vP~L~~~~~~l~eS~~I~~yl~~~ 45 (161)
|.+|....|+.....-..|.+|+.++
T Consensus 25 g~i~~~~~g~~~~~~~~~l~~~~~~~ 50 (51)
T PF12728_consen 25 GKIPPFKIGRKWRIPKSDLDRWLERR 50 (51)
T ss_pred CCCCeEEeCCEEEEeHHHHHHHHHhC
Confidence 67888887787888888888888753
No 152
>PHA02776 E7 protein; Provisional
Probab=20.68 E-value=39 Score=21.38 Aligned_cols=13 Identities=15% Similarity=0.314 Sum_probs=11.4
Q ss_pred ccCCCCChhHHhH
Q 038553 112 FGGDSFGFVDVIA 124 (161)
Q Consensus 112 l~G~~~t~aD~~~ 124 (161)
|.|+++|+-||.+
T Consensus 1 M~G~~pTl~DIvL 13 (101)
T PHA02776 1 MHGKHPTLKDIVL 13 (101)
T ss_pred CCCCCCcHhHeee
Confidence 4699999999987
Done!