Your job contains 1 sequence.
>038558
MYHHPSSSSSSQQNPMGPTTAAGVGGSGGLTRYVSAPGSLLRTAVDSIIGSSSPSPSPSQ
PSIVSSSHSHQHHHYFAGGSTTTAGGDSSPVSSFTTTESTCKVNSSNAPGNNTKSGLQRS
YGLNEIPQTRAASSSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGVSR
LKSQLSFTGQDSLSQISEESENGIDGVSSGSGRQNATHSYSTASFGMDSWENGTSIVFSA
PPSKRTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATH
PRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEH
CTCGCKPTS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038558
(369 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:505006103 - symbol:AT1G05805 "AT1G05805" speci... 634 4.8e-62 1
UNIPROTKB|Q7XT55 - symbol:OSJNBa0084K20.3 "OSJNBa0076N16.... 453 7.3e-43 1
TAIR|locus:2059979 - symbol:FBH4 "AT2G42280" species:3702... 332 3.0e-33 2
UNIPROTKB|Q8S490 - symbol:rau1 "Transcription factor RAU1... 354 2.3e-32 1
TAIR|locus:2026037 - symbol:FBH3 "AT1G51140" species:3702... 325 8.8e-32 2
TAIR|locus:2008693 - symbol:FBH1 "AT1G35460" species:3702... 306 2.0e-30 2
TAIR|locus:2141573 - symbol:FBH2 "AT4G09180" species:3702... 297 7.6e-29 2
UNIPROTKB|Q6K8J6 - symbol:OJ1669_F01.28 "Putative unchara... 184 3.2e-14 1
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 189 7.3e-13 1
TAIR|locus:2032990 - symbol:CES "AT1G25330" species:3702 ... 159 1.7e-10 1
TAIR|locus:2028804 - symbol:CIB5 "AT1G26260" species:3702... 167 4.9e-10 1
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 157 1.1e-09 2
TAIR|locus:2095198 - symbol:AT3G23690 "AT3G23690" species... 160 2.9e-09 1
TAIR|locus:505006688 - symbol:AT5G50915 "AT5G50915" speci... 157 3.1e-09 1
TAIR|locus:2139484 - symbol:CIB1 "AT4G34530" species:3702... 158 3.8e-09 1
UNIPROTKB|Q84T08 - symbol:OSJNBa0087C10.10 "BHLH transcri... 151 4.2e-09 2
UNIPROTKB|Q75M33 - symbol:P0668H12.5 "BHLH transcription ... 157 5.3e-09 1
TAIR|locus:2147760 - symbol:LRL3 "AT5G58010" species:3702... 155 6.0e-09 1
TAIR|locus:2115200 - symbol:BEE2 "AT4G36540" species:3702... 155 6.5e-09 1
UNIPROTKB|Q6EPZ6 - symbol:P0014G10.34 "BHLH transcription... 157 6.8e-09 2
UNIPROTKB|Q84LH4 - symbol:OSJNBb0011H13.2 "Putative Helix... 155 8.1e-09 1
UNIPROTKB|Q5VR96 - symbol:P0038C05.31-1 "Os06g0275600 pro... 157 9.4e-09 1
TAIR|locus:2053766 - symbol:AT2G42300 "AT2G42300" species... 154 1.1e-08 1
TAIR|locus:2205420 - symbol:AT1G68920 species:3702 "Arabi... 155 1.4e-08 2
UNIPROTKB|Q8GZV6 - symbol:OJ1017C11.10 "Putative uncharac... 159 1.4e-08 1
TAIR|locus:2027809 - symbol:BEE3 "AT1G73830" species:3702... 149 2.0e-08 1
UNIPROTKB|Q69WS3 - symbol:OJ1118_E12.15 "Putative bHLH pr... 149 2.2e-08 1
UNIPROTKB|Q84QW1 - symbol:OJ1191_A10.109 "BHLH transcript... 153 2.3e-08 1
UNIPROTKB|Q6Z2G7 - symbol:P0680A05.9 "Putative bHLH trans... 149 2.4e-08 2
UNIPROTKB|Q6Z7E7 - symbol:P0020C11.18 "Putative bHLH tran... 154 2.9e-08 1
UNIPROTKB|Q7Y1H4 - symbol:OSJNBa0094F01.11 "Putative unch... 149 3.1e-08 1
UNIPROTKB|Q69JJ6 - symbol:OSJNBa0026C08.22 "TA1 protein-l... 152 3.4e-08 1
TAIR|locus:2183078 - symbol:SRS8 "AT5G33210" species:3702... 130 4.4e-08 1
TAIR|locus:2079676 - symbol:AT3G07340 "AT3G07340" species... 151 5.0e-08 1
TAIR|locus:2172209 - symbol:AT5G62610 "AT5G62610" species... 146 6.0e-08 1
TAIR|locus:2199221 - symbol:RSL4 "AT1G27740" species:3702... 144 7.5e-08 1
TAIR|locus:2152551 - symbol:AT5G48560 "AT5G48560" species... 150 7.5e-08 1
TAIR|locus:2014144 - symbol:BEE1 "BR enhanced expression ... 144 7.7e-08 1
TAIR|locus:2202867 - symbol:BPEp "AT1G59640" species:3702... 147 8.0e-08 1
UNIPROTKB|Q6ZCV8 - symbol:P0028A08.20 "Os08g0487700 prote... 147 9.2e-08 1
UNIPROTKB|Q5N802 - symbol:P0004D12.24 "BHLH transcription... 150 1.1e-07 2
UNIPROTKB|Q2QMV9 - symbol:LOC_Os12g39850 "Helix-loop-heli... 144 1.3e-07 1
TAIR|locus:2007534 - symbol:AT1G03040 "AT1G03040" species... 143 1.7e-07 1
TAIR|locus:2132303 - symbol:UNE12 "AT4G02590" species:370... 143 1.8e-07 1
TAIR|locus:2201906 - symbol:AT1G10120 "AT1G10120" species... 144 2.0e-07 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 126 2.7e-07 3
TAIR|locus:2118934 - symbol:RSL2 "AT4G33880" species:3702... 142 3.2e-07 1
UNIPROTKB|Q69Y51 - symbol:P0698A06.26-2 "Putative bHLH tr... 143 3.2e-07 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 137 8.2e-07 1
TAIR|locus:504954900 - symbol:AT5G43175 "AT5G43175" speci... 133 8.5e-07 1
TAIR|locus:2074865 - symbol:HEC2 "AT3G50330" species:3702... 130 2.4e-06 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 134 3.7e-06 1
UNIPROTKB|Q67TR8 - symbol:B1342C04.6 "Basic helix-loop-he... 128 4.5e-06 1
UNIPROTKB|Q6Z9R3 - symbol:P0461F06.33 "BHLH protein famil... 126 9.1e-06 1
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 131 1.0e-05 1
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 119 1.4e-05 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 126 1.8e-05 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 121 1.9e-05 1
UNIPROTKB|Q6AV35 - symbol:OSJNBa0063J18.7 "Putative trans... 123 3.7e-05 1
TAIR|locus:2155543 - symbol:HEC1 "HECATE 1" species:3702 ... 120 4.4e-05 1
TAIR|locus:2076581 - symbol:AT3G57800 "AT3G57800" species... 117 4.9e-05 2
TAIR|locus:2117788 - symbol:AT4G28800 species:3702 "Arabi... 122 9.4e-05 1
UNIPROTKB|Q2R0R9 - symbol:LOC_Os11g41640 "Helix-loop-heli... 117 0.00010 1
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 121 0.00016 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 118 0.00027 1
UNIPROTKB|Q5MP56 - symbol:BA1 "Uncharacterized protein" s... 111 0.00037 1
TAIR|locus:2156015 - symbol:RSL1 "AT5G37800" species:3702... 114 0.00039 1
TAIR|locus:2089418 - symbol:AT3G21330 "AT3G21330" species... 115 0.00043 1
UNIPROTKB|Q2QMN2 - symbol:LOC_Os12g40590 "Helix-loop-heli... 112 0.00048 1
UNIPROTKB|Q6K8Y4 - symbol:OJ1695_H09.18 "Basic helix-loop... 97 0.00055 3
UNIPROTKB|Q9ASJ3 - symbol:P0439B06.24 "Putative uncharact... 112 0.00061 1
TAIR|locus:2028957 - symbol:RHD6 "AT1G66470" species:3702... 112 0.00063 1
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 114 0.00063 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 116 0.00063 1
TAIR|locus:4010713916 - symbol:AT4G28815 species:3702 "Ar... 111 0.00086 1
UNIPROTKB|Q8W5G3 - symbol:OSJNBa0002J24.23 "Helix-loop-he... 111 0.00088 1
>TAIR|locus:505006103 [details] [associations]
symbol:AT1G05805 "AT1G05805" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC009999 HOGENOM:HOG000242890 EMBL:BT000954 EMBL:AY086106
IPI:IPI00516925 PIR:F86192 RefSeq:NP_563749.1 UniGene:At.11933
ProteinModelPortal:Q8H102 SMR:Q8H102 IntAct:Q8H102 STRING:Q8H102
PaxDb:Q8H102 PRIDE:Q8H102 EnsemblPlants:AT1G05805.1 GeneID:837090
KEGG:ath:AT1G05805 TAIR:At1g05805 eggNOG:NOG249421
InParanoid:Q8H102 OMA:NEVNETP PhylomeDB:Q8H102
ProtClustDB:CLSN2687697 Genevestigator:Q8H102 Uniprot:Q8H102
Length = 362
Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
Identities = 159/362 (43%), Positives = 195/362 (53%)
Query: 26 GSGGLTRYVSAPGSLLRTAVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFXXXXXXXXX 85
G GGL RY SAPGS L + VD +F
Sbjct: 19 GGGGLIRYGSAPGSFLNSVVDEVIGGGSSNARDFTGYQPSSDNFIGN--FFTGAADSSSL 76
Query: 86 XXXXPVSSFTTTESTCKVNSSNAPGNNTKS-GLQRSYG-LNEIPQ----------TXXXX 133
+ K +N N+ K L RSYG NEI Q
Sbjct: 77 RSDSTTCGVNNSSDGQKQLGNNNNNNSNKDIFLDRSYGGFNEISQQHKSNDIGGGNSSGS 136
Query: 134 XXXXXXXXXPAGFLSHFASETVGFSVTRETGNYNXXXXXXXXXXXXXXKSQLSFTGQDSL 193
PA F ++ AS+ FS+ + T +Y+ KSQLSFT DSL
Sbjct: 137 YSLARQRSSPADFFTYLASDKNNFSLNQPTSDYSPQGGSNGGRGHSRLKSQLSFTNHDSL 196
Query: 194 SQISEESENGIDGVSSGSGRQNATHSYSTASFGM---DSWENGT-SIVFSAP-PSKRTKT 248
++I+E +E V GSG HS+S ASFG DSW++G+ SI F+ PSKR+K
Sbjct: 197 ARINEVNETP---VHDGSG-----HSFSAASFGAATTDSWDDGSGSIGFTVTRPSKRSKD 248
Query: 249 LDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERE 308
+D +F SQ+++P + M +DN + +PEDSVPCKIRAKRGCATHPRSIAERE
Sbjct: 249 MDSGLF-------SQYSLPSDT-SMNYMDNFMQLPEDSVPCKIRAKRGCATHPRSIAERE 300
Query: 309 RRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTCGC--K 366
RRTRIS KLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQ+Q++NL KD E+CTCGC K
Sbjct: 301 RRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQLQNLKKDQENCTCGCSEK 360
Query: 367 PT 368
P+
Sbjct: 361 PS 362
>UNIPROTKB|Q7XT55 [details] [associations]
symbol:OSJNBa0084K20.3 "OSJNBa0076N16.1 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000141 EMBL:AL606613 EMBL:AL731617 Uniprot:Q7XT55
Length = 218
Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
Identities = 106/204 (51%), Positives = 129/204 (63%)
Query: 182 KSQLSFT----GQDSLSQISEES----ENGIDGVSSGSGR--QN-ATH-----SYSTASF 225
K+ LSF G LSQISE+ + I G + GR +N +TH S+S+ F
Sbjct: 12 KAPLSFASSRQGSGGLSQISEDGIPDLTDSIHGAAHHHGRSEENVSTHDHVVRSFSSGGF 71
Query: 226 GMDSWENGTSIVFSAPPSKRTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPED 285
+ SWE+ SIVFS K + DI L+ +SQ P+ EMA V+ L + D
Sbjct: 72 SIGSWEDSNSIVFSTSTGKSGAHGNDDIIATLSNYESQLVAPR---EMAGVEKYLQMQHD 128
Query: 286 SVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIK 345
VP ++RAKRGCATHPRSIAERERRTRIS KL+KLQ LVPNMDKQTS SDMLDLAV HIK
Sbjct: 129 QVPFRVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIK 188
Query: 346 GLQNQVENLHKDLEHCTCGCKPTS 369
GLQ+Q++ L +D E CTC CK S
Sbjct: 189 GLQSQLQTLKEDKEKCTCSCKQAS 212
>TAIR|locus:2059979 [details] [associations]
symbol:FBH4 "AT2G42280" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0046685
"response to arsenic-containing substance" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC002561 GO:GO:0048573
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG312535
HOGENOM:HOG000242890 EMBL:BT015339 EMBL:BT015712 EMBL:AK228981
IPI:IPI00530686 IPI:IPI00538142 PIR:T00937 RefSeq:NP_181757.2
RefSeq:NP_973670.1 UniGene:At.12448 UniGene:At.43726
ProteinModelPortal:Q66GR3 SMR:Q66GR3 PRIDE:Q66GR3
EnsemblPlants:AT2G42280.1 GeneID:818829 KEGG:ath:AT2G42280
TAIR:At2g42280 InParanoid:Q66GR3 OMA:NDNRANC PhylomeDB:Q66GR3
ProtClustDB:CLSN2681218 Genevestigator:Q66GR3 Uniprot:Q66GR3
Length = 359
Score = 332 (121.9 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 73/152 (48%), Positives = 98/152 (64%)
Query: 224 SFGMDSWENGTSIVFSAPPSKRTKTLDGDIF---------NCLNALDSQFTMPQ---TSL 271
+F W + +S + + KR DG +F N + L ++P+ T+
Sbjct: 201 NFPYSHWNDPSSFIDNLSSLKREAEDDGKLFLGAQNGESGNRMQLLSHHLSLPKSSSTAS 260
Query: 272 EMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQT 331
+M +VD L + +DSVPCKIRAKRGCATHPRSIAER RRTRIS +++KLQ+LVPNMDKQT
Sbjct: 261 DMVSVDKYLQL-QDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQT 319
Query: 332 SYSDMLDLAVQHIKGLQNQVENLHKDLEHCTC 363
+ SDMLDLAV +IK LQ Q + L+ + +C C
Sbjct: 320 NTSDMLDLAVDYIKDLQRQYKILNDNRANCKC 351
Score = 46 (21.3 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 26 GSGGLTRYVSAPGSLLRTAVD 46
GSG L R+ SAP S+L VD
Sbjct: 14 GSG-LLRFRSAPSSVLAAFVD 33
>UNIPROTKB|Q8S490 [details] [associations]
symbol:rau1 "Transcription factor RAU1" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF465824
ProteinModelPortal:Q8S490 Gramene:Q8S490 Genevestigator:Q8S490
Uniprot:Q8S490
Length = 150
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 68/107 (63%), Positives = 85/107 (79%)
Query: 260 LDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKK 319
L QF++P+TS EMA ++ L +D+VPCKIRAKRGCATHPRSIAER RRTRIS +++K
Sbjct: 39 LAHQFSLPKTSSEMAAIEKFLQF-QDAVPCKIRAKRGCATHPRSIAERVRRTRISERIRK 97
Query: 320 LQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTCGCK 366
LQ+LVPNMDKQT+ +DMLDLAV +IK LQ QV+ L+ +CTC K
Sbjct: 98 LQELVPNMDKQTNTADMLDLAVDYIKDLQKQVKGLNDSRANCTCSAK 144
>TAIR|locus:2026037 [details] [associations]
symbol:FBH3 "AT1G51140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0048573 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC079828 EMBL:AY034941 EMBL:AY063120
IPI:IPI00519239 PIR:H96548 RefSeq:NP_564583.1 UniGene:At.19155
ProteinModelPortal:Q9C690 SMR:Q9C690 PaxDb:Q9C690 PRIDE:Q9C690
EnsemblPlants:AT1G51140.1 GeneID:841537 KEGG:ath:AT1G51140
TAIR:At1g51140 eggNOG:NOG312535 HOGENOM:HOG000242890
InParanoid:Q9C690 OMA:TKDEDSA PhylomeDB:Q9C690
ProtClustDB:CLSN2917227 Genevestigator:Q9C690 Uniprot:Q9C690
Length = 379
Score = 325 (119.5 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
Identities = 86/227 (37%), Positives = 121/227 (53%)
Query: 143 PAGFLSHFASETVGFSVTRETGNY---NXXXXXXXXXXXXXXKSQLSFTGQDSLSQISEE 199
PAG S ET +V + G + N +S+L ++S ISE
Sbjct: 159 PAGLFSSIDVETAYAAVMKSMGGFGGSNVMSTSNTEASSLTPRSKLLPPTSRAMSPISEV 218
Query: 200 SENGIDGVSSGSGRQNATHSYSTASFGMDSWENGTSIVFSAPPS---KRTKTLDGDIFNC 256
G SS + + ++ SFG + + + S + KT D D +
Sbjct: 219 DVK--PGFSSRLPPRTLSGGFNR-SFGNEGSASSKLTALARTQSGGLDQYKTKDEDSASR 275
Query: 257 LNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRK 316
L ++P++ ++ ++ LL+ DS+PCKIRAKRGCATHPRSIAER RRT+IS +
Sbjct: 276 RPPLAHHMSLPKS---LSDIEQLLS---DSIPCKIRAKRGCATHPRSIAERVRRTKISER 329
Query: 317 LKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTC 363
++KLQDLVPNMD QT+ +DMLDLAVQ+IK LQ QV+ L + C C
Sbjct: 330 MRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQVKALEESRARCRC 376
Score = 39 (18.8 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 27 SGGLTRYVSAPGS 39
+ GL RY SAP S
Sbjct: 22 NSGLIRYQSAPSS 34
>TAIR|locus:2008693 [details] [associations]
symbol:FBH1 "AT1G35460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488612 EMBL:AC023064 EMBL:AF411791 EMBL:AY093794
IPI:IPI00538359 PIR:F86475 RefSeq:NP_174776.1 UniGene:At.18017
ProteinModelPortal:Q9C8P8 SMR:Q9C8P8 PRIDE:Q9C8P8
EnsemblPlants:AT1G35460.1 GeneID:840438 KEGG:ath:AT1G35460
TAIR:At1g35460 eggNOG:NOG263612 HOGENOM:HOG000095218
InParanoid:Q9C8P8 OMA:NLCLTEL PhylomeDB:Q9C8P8
ProtClustDB:CLSN2679906 Genevestigator:Q9C8P8 Uniprot:Q9C8P8
Length = 259
Score = 306 (112.8 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 68/159 (42%), Positives = 104/159 (65%)
Query: 209 SGSGRQNATHSYSTASFGMDSWENGTSIVFSAPPSKRTKTLDGDIFNCLNALDSQFTMPQ 268
SGSG + T Y + +FG+ + + S P+KR++ ++ + L + Q +
Sbjct: 107 SGSG--SGTDGYFS-NFGIPANYDYLSTNVDISPTKRSRDMETQFSSQLK--EEQMSGGI 161
Query: 269 TSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMD 328
+ + +D + EDSVPC++RAKRGCATHPRSIAER RRTRIS ++++LQ+LVPNMD
Sbjct: 162 SGMMDMNMDKIF---EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMD 218
Query: 329 KQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTCGCKP 367
KQT+ +DML+ AV+++K LQ+Q++ L + + C C KP
Sbjct: 219 KQTNTADMLEEAVEYVKALQSQIQELTEQQKRCKC--KP 255
Score = 45 (20.9 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 17 GPTTAAGVGGSG-----GLTRYVSAPGSLLRTAVD 46
G ++ G GG G GL+R SAP + + T ++
Sbjct: 8 GGSSGGGGGGGGEVSRSGLSRIRSAPATWIETLLE 42
>TAIR|locus:2141573 [details] [associations]
symbol:FBH2 "AT4G09180" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL161514 HOGENOM:HOG000095218 ProtClustDB:CLSN2679906
EMBL:AF488613 EMBL:BT010423 EMBL:AK230384 IPI:IPI00545642
PIR:B85093 RefSeq:NP_192657.1 UniGene:At.33710
ProteinModelPortal:Q9M0R0 SMR:Q9M0R0 PaxDb:Q9M0R0 PRIDE:Q9M0R0
EnsemblPlants:AT4G09180.1 GeneID:826499 KEGG:ath:AT4G09180
TAIR:At4g09180 eggNOG:NOG277140 InParanoid:Q9M0R0 OMA:MENLMED
PhylomeDB:Q9M0R0 Genevestigator:Q9M0R0 Uniprot:Q9M0R0
Length = 262
Score = 297 (109.6 bits), Expect = 7.6e-29, Sum P(2) = 7.6e-29
Identities = 67/147 (45%), Positives = 102/147 (69%)
Query: 224 SFGMDS-WENGTSIVFSAPPSKRTKTLDGDIFNCLNALDSQFTMPQTSLEMAT-----VD 277
SFG+ + ++ + + +P SKR++ ++ +F+ SQ Q+S ++ T D
Sbjct: 112 SFGIQANYDYLSGNIDVSPGSKRSREMEA-LFSSPE-FTSQMKGEQSSGQVPTGVSSMSD 169
Query: 278 -NLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDM 336
N+ N+ EDSV ++RAKRGCATHPRSIAER RRTRIS +++KLQ+LVPNMDKQT+ +DM
Sbjct: 170 MNMENLMEDSVAFRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADM 229
Query: 337 LDLAVQHIKGLQNQVENLHKDLEHCTC 363
L+ AV+++K LQ Q++ L ++ + CTC
Sbjct: 230 LEEAVEYVKVLQRQIQELTEEQKRCTC 256
Score = 39 (18.8 bits), Expect = 7.6e-29, Sum P(2) = 7.6e-29
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 17 GPTTAAGVGGSGGLTR 32
G G GG GGL+R
Sbjct: 11 GGDDGGGRGGGGGLSR 26
>UNIPROTKB|Q6K8J6 [details] [associations]
symbol:OJ1669_F01.28 "Putative uncharacterized protein
OJ1669_F01.28" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] GO:GO:0005634
HOGENOM:HOG000242890 EMBL:AP004124 Gramene:Q6K8J6 Uniprot:Q6K8J6
Length = 153
Score = 184 (69.8 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 60/131 (45%), Positives = 70/131 (53%)
Query: 182 KSQLSFT-GQDSLSQISEESENGIDGVSSGSGRQNATHSYSTASFGMDSWENGTSIVFSA 240
KSQLSFT G LS I+E DG A+ T S G S G SIV
Sbjct: 16 KSQLSFTAGPPHLSHIAE------DGAFPDRAGAEASVP-RTFSAGGSSGGGGFSIV--- 65
Query: 241 PPSKRTKTLDGDIFNCLNALDSQFT-MPQTS-LEMATVDNLLNIPEDSVPCKIRAKRGCA 298
P + ++ DI + L +SQF M TS LEMA +D L + D VP K+RAKRGCA
Sbjct: 66 GPWEESR----DIISTLGGYESQFGGMASTSALEMAGMDRYLQLQHDQVPFKVRAKRGCA 121
Query: 299 THPRSIAERER 309
THPRSIAER R
Sbjct: 122 THPRSIAERVR 132
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 189 (71.6 bits), Expect = 7.3e-13, P = 7.3e-13
Identities = 51/123 (41%), Positives = 69/123 (56%)
Query: 232 NGTSIVFSAPPSKRTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKI 291
NG S+ S P + + G + N +Q T PQ S AT + P+ KI
Sbjct: 82 NGFSVAGSLPNFQIPQGSGGGLMNQQGQTQTQ-TQPQASASTATGGTVAAPPQSRT--KI 138
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ QV
Sbjct: 139 RARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYVKFLQLQV 197
Query: 352 ENL 354
+ L
Sbjct: 198 KVL 200
>TAIR|locus:2032990 [details] [associations]
symbol:CES "AT1G25330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:2000488 "positive regulation of brassinosteroid biosynthetic
process" evidence=IMP] [GO:0048441 "petal development"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG264296 EMBL:AC079374 EMBL:DQ446289 EMBL:DQ652859
EMBL:AK175757 EMBL:AY088885 EMBL:AF488607 IPI:IPI00519962
PIR:B86383 PIR:D86381 RefSeq:NP_564229.1 UniGene:At.48236
UniGene:At.63980 ProteinModelPortal:A4D998 SMR:A4D998
EnsemblPlants:AT1G25330.1 GeneID:839117 KEGG:ath:AT1G25330
GeneFarm:2907 TAIR:At1g25330 InParanoid:A4D998 PhylomeDB:A4D998
Genevestigator:A4D998 GO:GO:2000488 Uniprot:A4D998
Length = 223
Score = 159 (61.0 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D V +RAKRG AT S+AER RR +I+ +LK LQDLVP K + MLD+ +
Sbjct: 98 PKDVV--HVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIID 155
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQNQ+E L L
Sbjct: 156 YVRSLQNQIEFLSMKL 171
>TAIR|locus:2028804 [details] [associations]
symbol:CIB5 "AT1G26260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009911 "positive regulation of flower development"
evidence=IGI] [GO:0048513 "organ development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC079829 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238007
EMBL:AK117355 EMBL:BT005334 EMBL:AJ630483 EMBL:AY568655
EMBL:AF488608 IPI:IPI00529982 IPI:IPI00547855 PIR:H86388
RefSeq:NP_001031093.1 RefSeq:NP_173950.1 RefSeq:NP_973913.1
UniGene:At.41276 ProteinModelPortal:Q9C670 SMR:Q9C670 IntAct:Q9C670
STRING:Q9C670 EnsemblPlants:AT1G26260.1 EnsemblPlants:AT1G26260.2
GeneID:839167 KEGG:ath:AT1G26260 TAIR:At1g26260 eggNOG:NOG284637
InParanoid:Q9C670 OMA:ETHGYES PhylomeDB:Q9C670
ProtClustDB:CLSN2682645 Genevestigator:Q9C670 Uniprot:Q9C670
Length = 390
Score = 167 (63.8 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 58/171 (33%), Positives = 81/171 (47%)
Query: 191 DSLSQISEESENGIDGVSSGSGRQNATHSYSTASFGMDSWENGTSIVFSAPPSKRTKTLD 250
D+ + E S N + S SG + + A G S G FS SK+ K +
Sbjct: 135 DASKLVKERSINNVSEDSQSSGG----NGHDDAKCGQTS-SKG----FS---SKKRKRIG 182
Query: 251 GDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVP---CKIRAKRGCATHPRSIAER 307
D C D + Q+ A N P DS+ +RA+RG AT+ S+AER
Sbjct: 183 KD---CEEEEDKKQKDEQSPTSNANKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAER 239
Query: 308 ERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDL 358
RR +IS ++K LQDLVP DK T + MLD + +++ LQ Q+E L L
Sbjct: 240 VRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKL 290
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 157 (60.3 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 35/65 (53%), Positives = 47/65 (72%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K+RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ
Sbjct: 129 KVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYVKFLQL 187
Query: 350 QVENL 354
QV+ L
Sbjct: 188 QVKVL 192
Score = 40 (19.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 210 GSGRQNATHSYSTAS 224
GSG Q T S +TAS
Sbjct: 100 GSGGQTQTQSQATAS 114
>TAIR|locus:2095198 [details] [associations]
symbol:AT3G23690 "AT3G23690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
EMBL:AP000377 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AY065441 EMBL:AY096536
EMBL:EU550216 EMBL:EU550217 EMBL:EU550218 EMBL:EU550219
EMBL:EU550220 EMBL:EU550221 EMBL:EU550222 EMBL:EU550223
EMBL:EU550224 EMBL:EU550225 EMBL:EU550226 EMBL:EU550227
EMBL:EU550228 EMBL:EU550229 EMBL:EU550230 EMBL:EU550231
EMBL:EU550232 EMBL:EU550233 EMBL:EU550234 EMBL:EU550235
EMBL:EU550236 EMBL:EU550237 EMBL:EU550238 EMBL:EU550239
EMBL:AF488609 IPI:IPI00545445 RefSeq:NP_189011.2 UniGene:At.6666
ProteinModelPortal:Q9LK48 SMR:Q9LK48 PaxDb:Q9LK48 PRIDE:Q9LK48
EnsemblPlants:AT3G23690.1 GeneID:821950 KEGG:ath:AT3G23690
TAIR:At3g23690 eggNOG:NOG292697 InParanoid:Q9LK48 OMA:MEFNANA
PhylomeDB:Q9LK48 ProtClustDB:CLSN2917952 Genevestigator:Q9LK48
Uniprot:Q9LK48
Length = 371
Score = 160 (61.4 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 52/153 (33%), Positives = 77/153 (50%)
Query: 207 VSSGSGRQNATHSYSTASFGMDSWENGTSIVFSAPPSKRTKT-LDGDIFNCLNALDSQFT 265
+ SG+G+++ S TAS S ENG S KR+K + G N + DS+
Sbjct: 120 IPSGNGKESPASSSLTASNSKVSGENGGS-----KGGKRSKQDVAGSSKNGVEKCDSKGD 174
Query: 266 MPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVP 325
+ P+D + +RA+RG AT S+AER RR +IS ++ LQDLVP
Sbjct: 175 NKDDAKPPEA-------PKDYI--HVRARRGQATDSHSLAERARREKISERMTLLQDLVP 225
Query: 326 NMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDL 358
++ T + MLD + +++ LQ QVE L L
Sbjct: 226 GCNRITGKAVMLDEIINYVQSLQRQVEFLSMKL 258
>TAIR|locus:505006688 [details] [associations]
symbol:AT5G50915 "AT5G50915" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009739 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB017063 EMBL:AF428350 EMBL:AY057549 EMBL:AY113059
EMBL:AY087602 IPI:IPI00536793 RefSeq:NP_568745.1 RefSeq:NP_851163.1
UniGene:At.23601 ProteinModelPortal:Q93W88 SMR:Q93W88
EnsemblPlants:AT5G50915.1 EnsemblPlants:AT5G50915.2 GeneID:835164
KEGG:ath:AT5G50915 TAIR:At5g50915 eggNOG:NOG262059
HOGENOM:HOG000242938 InParanoid:Q93W88 OMA:ISERMRT PhylomeDB:Q93W88
ProtClustDB:CLSN2689980 Genevestigator:Q93W88 Uniprot:Q93W88
Length = 286
Score = 157 (60.3 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 51/171 (29%), Positives = 88/171 (51%)
Query: 192 SLSQISEES--ENGIDGV-SSGSGR-QNATHSYSTASFGMDSWENGTSIVFSAPPSKRTK 247
++S + + S E +D +SGS + N T + +T S D +G S + + ++ K
Sbjct: 43 NISTVEDISFLEYNVDKTENSGSEKLANTTKTATTGSSSCDQLSHGPSAITNTGKTRGRK 102
Query: 248 TLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAER 307
+ + N ++ + + Q + + + P D + +RA+RG AT S+AER
Sbjct: 103 ARNSN--NSKEGVEGRKSKKQ---KRGSKEEP---PTDYI--HVRARRGQATDSHSLAER 152
Query: 308 ERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDL 358
RR +IS +++ LQ+LVP DK T + MLD + +++ LQ QVE L L
Sbjct: 153 VRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKL 203
>TAIR|locus:2139484 [details] [associations]
symbol:CIB1 "AT4G34530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IDA]
[GO:0009911 "positive regulation of flower development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161585 EMBL:AL023094
HOGENOM:HOG000238007 EMBL:AF488596 EMBL:AK117846 EMBL:AY120741
EMBL:BT005313 IPI:IPI00519970 PIR:T05273 RefSeq:NP_195179.2
UniGene:At.48937 ProteinModelPortal:Q8GY61 SMR:Q8GY61
DIP:DIP-59356N IntAct:Q8GY61 PRIDE:Q8GY61 EnsemblPlants:AT4G34530.1
GeneID:829604 KEGG:ath:AT4G34530 TAIR:At4g34530 eggNOG:NOG251551
InParanoid:Q8GY61 OMA:SGYSHEM PhylomeDB:Q8GY61
ProtClustDB:CLSN2915063 Genevestigator:Q8GY61 Uniprot:Q8GY61
Length = 335
Score = 158 (60.7 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 34/68 (50%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT SIAER RR +IS ++K LQDLVP DK T + MLD + +++ LQ Q
Sbjct: 172 VRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQ 231
Query: 351 VENLHKDL 358
+E L L
Sbjct: 232 IEFLSMKL 239
>UNIPROTKB|Q84T08 [details] [associations]
symbol:OSJNBa0087C10.10 "BHLH transcription factor,
putative, expressed" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC108906 RefSeq:NP_001051605.1
UniGene:Os.33544 STRING:Q84T08 EnsemblPlants:LOC_Os03g58830.1
GeneID:4334471 KEGG:osa:4334471 OMA:GTSTSEW ProtClustDB:CLSN2694415
Uniprot:Q84T08
Length = 265
Score = 151 (58.2 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 33/69 (47%), Positives = 45/69 (65%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQ 195
Query: 351 VENLHKDLE 359
VE L LE
Sbjct: 196 VEFLSMKLE 204
Score = 37 (18.1 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 12/57 (21%), Positives = 22/57 (38%)
Query: 196 ISEESENGIDGVSSGSGRQNATHSYSTASFGMDSWENGTSIVFSAPPSKRTKTLDGD 252
+ ++S + G G Q+ T S + S + +S+ A R + GD
Sbjct: 64 LEDDSSRIVSTSGGGGGGQDLTDSEAKRFKASKSSGDNSSLRTEAETDSRNASKSGD 120
>UNIPROTKB|Q75M33 [details] [associations]
symbol:P0668H12.5 "BHLH transcription factor" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000142 EMBL:AC084818 EMBL:AC073405 EMBL:HQ858853
EMBL:AK065864 RefSeq:NP_001054390.1 UniGene:Os.23082
EnsemblPlants:LOC_Os05g01256.1 EnsemblPlants:LOC_Os05g01256.2
GeneID:4337537 KEGG:osa:4337537 eggNOG:NOG296531 Uniprot:Q75M33
Length = 339
Score = 157 (60.3 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 34/68 (50%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQ LVP DK T + MLD + +++ LQNQ
Sbjct: 180 VRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQ 239
Query: 351 VENLHKDL 358
VE L L
Sbjct: 240 VEFLSMKL 247
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 155 (59.6 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 33/65 (50%), Positives = 48/65 (73%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD +++++ LQ
Sbjct: 98 RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK-TDKASMLDEIIEYVRFLQL 156
Query: 350 QVENL 354
QV+ L
Sbjct: 157 QVKVL 161
>TAIR|locus:2115200 [details] [associations]
symbol:BEE2 "AT4G36540" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
PROSITE:PS00678 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161589 EMBL:Z99708
EMBL:AF488591 EMBL:AF370231 EMBL:AY059122 EMBL:AY054588
EMBL:BT000388 EMBL:AY084997 EMBL:AY138254 IPI:IPI00540245
IPI:IPI00548266 PIR:D85431 RefSeq:NP_195372.1 RefSeq:NP_849508.1
UniGene:At.25403 ProteinModelPortal:Q93VJ4 SMR:Q93VJ4 IntAct:Q93VJ4
PRIDE:Q93VJ4 EnsemblPlants:AT4G36540.1 GeneID:829806
KEGG:ath:AT4G36540 TAIR:At4g36540 eggNOG:NOG240651
InParanoid:Q93VJ4 OMA:ELECHID PhylomeDB:Q93VJ4
ProtClustDB:CLSN2685556 Genevestigator:Q93VJ4 Uniprot:Q93VJ4
Length = 304
Score = 155 (59.6 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS+K+K LQD+VP +K T + MLD + +++ LQ Q
Sbjct: 141 VRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQ 200
Query: 351 VENLHKDL 358
VE L L
Sbjct: 201 VEFLSMKL 208
>UNIPROTKB|Q6EPZ6 [details] [associations]
symbol:P0014G10.34 "BHLH transcription factor PTF1-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 HOGENOM:HOG000239571 EMBL:AP005784
RefSeq:NP_001175840.1 UniGene:Os.59658
EnsemblPlants:LOC_Os09g25040.1 GeneID:9272478 KEGG:osa:9272478
OMA:SMSVLTA Uniprot:Q6EPZ6
Length = 499
Score = 157 (60.3 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDK--QTSYSDMLDLAVQHIKGL 347
++RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K QT + MLD + ++K L
Sbjct: 249 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFL 308
Query: 348 QNQVE 352
Q QV+
Sbjct: 309 QLQVK 313
Score = 41 (19.5 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 12 QQNPMGPTTAAGVGGSGG 29
Q P PT + G GG GG
Sbjct: 203 QTAPTIPTQSFGGGGGGG 220
Score = 38 (18.4 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 10/28 (35%), Positives = 12/28 (42%)
Query: 3 HHPXXXXXXQQNPMGPTTAAGVGGSGGL 30
HH ++P G G GG GGL
Sbjct: 123 HHMMLQGLGGRSPAG---GGGGGGDGGL 147
>UNIPROTKB|Q84LH4 [details] [associations]
symbol:OSJNBb0011H13.2 "Putative Helix-loop-helix
DNA-binding domain containing protein" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 EMBL:AP008209
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140 EMBL:AC120983
EMBL:AC135956 RefSeq:NP_001051150.1 UniGene:Os.24540
EnsemblPlants:LOC_Os03g51910.1 GeneID:4333984 KEGG:osa:4333984
eggNOG:NOG262475 OMA:SKQMMLS ProtClustDB:CLSN2694257 Uniprot:Q84LH4
Length = 327
Score = 155 (59.6 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 37/75 (49%), Positives = 48/75 (64%)
Query: 284 EDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQH 343
ED V +RAKRG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +
Sbjct: 142 EDYV--HVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINY 199
Query: 344 IKGLQNQVENLHKDL 358
++ LQ QVE L L
Sbjct: 200 VQSLQRQVEFLSMKL 214
>UNIPROTKB|Q5VR96 [details] [associations]
symbol:P0038C05.31-1 "Os06g0275600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003044 RefSeq:NP_001057380.1 UniGene:Os.32526
EnsemblPlants:LOC_Os06g16400.1 EnsemblPlants:LOC_Os06g16400.2
GeneID:4340749 KEGG:osa:4340749 ProtClustDB:CLSN2697804
Uniprot:Q5VR96
Length = 437
Score = 157 (60.3 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 37/82 (45%), Positives = 51/82 (62%)
Query: 277 DNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDM 336
DN + ED + +RA+RG AT+ S+AER RR +IS ++K LQDLVP K T + M
Sbjct: 248 DNAGSPKEDYI--HVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVM 305
Query: 337 LDLAVQHIKGLQNQVENLHKDL 358
LD + +++ LQ QVE L L
Sbjct: 306 LDEIINYVQSLQRQVEFLSMKL 327
>TAIR|locus:2053766 [details] [associations]
symbol:AT2G42300 "AT2G42300" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005956 EMBL:AY065411 EMBL:AY096521 EMBL:AK175584
EMBL:AK176019 EMBL:AK176634 EMBL:AF488583 IPI:IPI00532521
PIR:C84852 RefSeq:NP_850368.1 UniGene:At.28495
ProteinModelPortal:Q8VZ02 SMR:Q8VZ02 EnsemblPlants:AT2G42300.1
GeneID:818831 KEGG:ath:AT2G42300 TAIR:At2g42300 eggNOG:NOG301522
HOGENOM:HOG000037005 InParanoid:Q8VZ02 OMA:PEWGREE PhylomeDB:Q8VZ02
ProtClustDB:CLSN2680198 Genevestigator:Q8VZ02 Uniprot:Q8VZ02
Length = 327
Score = 154 (59.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 34/88 (38%), Positives = 54/88 (61%)
Query: 268 QTSLEMATVDNLLNIPEDSVP-CKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPN 326
+ ++ +T N ++ D +P +RA+RG AT S+AER RR +I+ ++K LQ+LVP
Sbjct: 161 EKKVKSSTKKNKSSVESDKLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPG 220
Query: 327 MDKQTSYSDMLDLAVQHIKGLQNQVENL 354
DK + +LD + H++ LQ QVE L
Sbjct: 221 CDKIQGTALVLDEIINHVQTLQRQVEML 248
>TAIR|locus:2205420 [details] [associations]
symbol:AT1G68920 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AF488584 EMBL:AY128299
EMBL:BT002259 IPI:IPI00536565 IPI:IPI00545990 PIR:G96713
RefSeq:NP_001031255.1 RefSeq:NP_177058.1 RefSeq:NP_849863.2
UniGene:At.28096 ProteinModelPortal:Q9CAA9 SMR:Q9CAA9 STRING:Q9CAA9
EnsemblPlants:AT1G68920.1 EnsemblPlants:AT1G68920.2 GeneID:843225
KEGG:ath:AT1G68920 TAIR:At1g68920 eggNOG:NOG301979
HOGENOM:HOG000238007 InParanoid:Q3E6P7 OMA:MLKGGIF PhylomeDB:Q9CAA9
ProtClustDB:CLSN2682343 Genevestigator:Q9CAA9 Uniprot:Q9CAA9
Length = 486
Score = 155 (59.6 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 35/76 (46%), Positives = 49/76 (64%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D +RA+RG AT+ S+AER RR +IS ++K LQDLVP +K T + MLD +
Sbjct: 296 PKDGY-IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 354
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 355 YVQSLQRQVEFLSMKL 370
Score = 40 (19.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 105 SSNAPGNNTKSGLQRSYGLNEIPQ 128
S N+PG + SG Q+ ++ P+
Sbjct: 274 SPNSPGKKSNSGKQQGKQSSDPPK 297
>UNIPROTKB|Q8GZV6 [details] [associations]
symbol:OJ1017C11.10 "Putative uncharacterized protein
OJ1017C11.10" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR001810
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50181 PROSITE:PS50888
SMART:SM00256 SMART:SM00353 GO:GO:0005634 SUPFAM:SSF81383
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR019955
PROSITE:PS50053 EMBL:AC135157 ProteinModelPortal:Q8GZV6
Gramene:Q8GZV6 Uniprot:Q8GZV6
Length = 776
Score = 159 (61.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 44/118 (37%), Positives = 64/118 (54%)
Query: 243 SKRTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVP--CKIRAKRGCATH 300
SKR + +G + L++ + MPQ L M + S +RAKRG AT+
Sbjct: 580 SKRKGSGEGS--SSLHSQEETGEMPQRELSMEHAGEKAGDADASREEYVHVRAKRGQATN 637
Query: 301 PRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDL 358
S+AER RR +I+ ++K LQDLVP +K T + MLD + +++ LQ QVE L L
Sbjct: 638 SHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKL 695
>TAIR|locus:2027809 [details] [associations]
symbol:BEE3 "AT1G73830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000090950 ProtClustDB:CLSN2680013 EMBL:AF488585
EMBL:AC012679 EMBL:AK118781 EMBL:BT006055 IPI:IPI00541876
RefSeq:NP_177524.2 UniGene:At.34949 ProteinModelPortal:Q8GWK7
SMR:Q8GWK7 EnsemblPlants:AT1G73830.1 GeneID:843719
KEGG:ath:AT1G73830 TAIR:At1g73830 eggNOG:NOG264296
InParanoid:Q8GWK7 OMA:LENNFHQ PhylomeDB:Q8GWK7
Genevestigator:Q8GWK7 Uniprot:Q8GWK7
Length = 261
Score = 149 (57.5 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 33/68 (48%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT SIAER RR +I+ +LK LQD+VP K + MLD + +++ LQNQ
Sbjct: 147 VRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQ 206
Query: 351 VENLHKDL 358
VE L L
Sbjct: 207 VEFLSMKL 214
>UNIPROTKB|Q69WS3 [details] [associations]
symbol:OJ1118_E12.15 "Putative bHLH protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003743
ProteinModelPortal:Q69WS3 Gramene:Q69WS3 Uniprot:Q69WS3
Length = 268
Score = 149 (57.5 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 32/68 (47%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ+Q
Sbjct: 128 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQ 187
Query: 351 VENLHKDL 358
VE + K L
Sbjct: 188 VEFMFKYL 195
>UNIPROTKB|Q84QW1 [details] [associations]
symbol:OJ1191_A10.109 "BHLH transcription
factor(GBOF-1)-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP008214
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003888
RefSeq:NP_001062289.1 UniGene:Os.10830
EnsemblPlants:LOC_Os08g41320.1 GeneID:4346087 KEGG:osa:4346087
eggNOG:NOG320619 OMA:ERISQRM ProtClustDB:CLSN2697487 Uniprot:Q84QW1
Length = 405
Score = 153 (58.9 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D V +RA+RG AT S+AER RR RIS+++K LQDLVP +K + MLD +
Sbjct: 198 PKDYV--HVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIIN 255
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 256 YVQSLQRQVEFLSMKL 271
>UNIPROTKB|Q6Z2G7 [details] [associations]
symbol:P0680A05.9 "Putative bHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008208 eggNOG:NOG251551 EMBL:AP005323 EMBL:AK119183
RefSeq:NP_001047868.1 UniGene:Os.7751
EnsemblPlants:LOC_Os02g47660.1 GeneID:4330462 KEGG:osa:4330462
OMA:TVESLCQ ProtClustDB:CLSN2693116 Uniprot:Q6Z2G7
Length = 361
Score = 149 (57.5 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 31/64 (48%), Positives = 44/64 (68%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR RIS +++ LQ+LVP +K T + MLD + +++ LQ Q
Sbjct: 164 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQ 223
Query: 351 VENL 354
VE L
Sbjct: 224 VEFL 227
Score = 40 (19.1 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 15 PMGPTTAAGVGGSGG 29
P+ P + G G SGG
Sbjct: 64 PLAPEASNGSGSSGG 78
>UNIPROTKB|Q6Z7E7 [details] [associations]
symbol:P0020C11.18 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:CM000139
EMBL:AP004865 EMBL:AK241924 EnsemblPlants:LOC_Os02g35660.1
OMA:TTAMQYL Uniprot:Q6Z7E7
Length = 524
Score = 154 (59.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 34/65 (52%), Positives = 48/65 (73%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR +IS ++K LQ+LVPN +K T+ + MLD + ++K LQ
Sbjct: 313 RVRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNK-TNKASMLDEIIDYVKFLQL 371
Query: 350 QVENL 354
QV+ L
Sbjct: 372 QVKVL 376
>UNIPROTKB|Q7Y1H4 [details] [associations]
symbol:OSJNBa0094F01.11 "Putative uncharacterized protein
OSJNBa0094F01.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0009567
EMBL:AC093713 EMBL:AK104412 RefSeq:NP_001051563.1 UniGene:Os.27522
EnsemblPlants:LOC_Os03g58330.1 GeneID:4334429 KEGG:osa:4334429
OMA:TDGTERQ ProtClustDB:CLSN2694399 Uniprot:Q7Y1H4
Length = 294
Score = 149 (57.5 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 35/73 (47%), Positives = 50/73 (68%)
Query: 283 PEDSVPC-KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAV 341
P+ P K+RA+RG AT P SIAER RR RI+ +++ LQ+LVPN +K T + MLD +
Sbjct: 124 PQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEIL 182
Query: 342 QHIKGLQNQVENL 354
++K L+ QV+ L
Sbjct: 183 DYVKFLRLQVKVL 195
>UNIPROTKB|Q69JJ6 [details] [associations]
symbol:OSJNBa0026C08.22 "TA1 protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008215
ProtClustDB:CLSN2697804 EMBL:AP006169 EMBL:HQ858863 EMBL:AK121418
RefSeq:NP_001063455.1 UniGene:Os.38400
EnsemblPlants:LOC_Os09g29830.3 GeneID:4347355 KEGG:osa:4347355
Uniprot:Q69JJ6
Length = 428
Score = 152 (58.6 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 248 VRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 307
Query: 351 VENLHKDL 358
VE L L
Sbjct: 308 VEFLSMKL 315
>TAIR|locus:2183078 [details] [associations]
symbol:SRS8 "AT5G33210" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 InterPro:IPR007818 InterPro:IPR006510
Pfam:PF05142 TIGRFAMs:TIGR01623 IPI:IPI00529608 RefSeq:NP_198306.1
UniGene:At.55108 EnsemblPlants:AT5G33210.1 GeneID:833279
KEGG:ath:AT5G33210 PhylomeDB:F4KH89 ArrayExpress:F4KH89
Uniprot:F4KH89
Length = 173
Score = 130 (50.8 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 278 NLLNIPEDSVPCKIRAKRGCATHPRSIAER 307
N+ I EDSVPC++RAKRGCATHPRSIAER
Sbjct: 4 NMEKIFEDSVPCRVRAKRGCATHPRSIAER 33
>TAIR|locus:2079676 [details] [associations]
symbol:AT3G07340 "AT3G07340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC009853 EMBL:AK175369 EMBL:AK175496
EMBL:AK176563 EMBL:AK176663 EMBL:BT026497 EMBL:AF488595
IPI:IPI00521004 RefSeq:NP_187390.1 UniGene:At.40357
ProteinModelPortal:Q9SRT2 SMR:Q9SRT2 EnsemblPlants:AT3G07340.1
GeneID:819922 KEGG:ath:AT3G07340 GeneFarm:2908 TAIR:At3g07340
eggNOG:NOG283912 InParanoid:Q9SRT2 OMA:MENELFM PhylomeDB:Q9SRT2
ProtClustDB:CLSN2684837 Genevestigator:Q9SRT2 Uniprot:Q9SRT2
Length = 456
Score = 151 (58.2 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 258 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 317
Query: 351 VENLHKDL 358
VE L L
Sbjct: 318 VEFLSMKL 325
>TAIR|locus:2172209 [details] [associations]
symbol:AT5G62610 "AT5G62610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 EMBL:AB020751 HOGENOM:HOG000238007 EMBL:AY072104
EMBL:AY123023 EMBL:AY084578 EMBL:AF488611 IPI:IPI00518025
RefSeq:NP_201067.1 UniGene:At.24534 UniGene:At.24682
ProteinModelPortal:Q9LV17 SMR:Q9LV17 PaxDb:Q9LV17 PRIDE:Q9LV17
EnsemblPlants:AT5G62610.1 GeneID:836382 KEGG:ath:AT5G62610
GeneFarm:2935 TAIR:At5g62610 eggNOG:NOG269855 InParanoid:Q9LV17
OMA:DDSSKMV PhylomeDB:Q9LV17 ProtClustDB:CLSN2916786
Genevestigator:Q9LV17 Uniprot:Q9LV17
Length = 281
Score = 146 (56.5 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 36/88 (40%), Positives = 51/88 (57%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS K+ LQD++P +K + +LD +
Sbjct: 147 PKDYI--HVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIIN 204
Query: 343 HIKGLQNQVENLHKDLEHCTCGCK--PT 368
+I+ LQ QVE L LE G PT
Sbjct: 205 YIQSLQRQVEFLSMKLEVVNSGASTGPT 232
>TAIR|locus:2199221 [details] [associations]
symbol:RSL4 "AT1G27740" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0048766 "root hair
initiation" evidence=IMP] [GO:0048765 "root hair cell
differentiation" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0009733
GO:GO:0003677 GO:GO:0016049 GO:GO:0003700 GO:GO:0006351
EMBL:AC012375 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY085436
IPI:IPI00523669 PIR:B86402 RefSeq:NP_564293.1 UniGene:At.41015
ProteinModelPortal:Q8LEG1 SMR:Q8LEG1 EnsemblPlants:AT1G27740.1
GeneID:839667 KEGG:ath:AT1G27740 TAIR:At1g27740 eggNOG:NOG244031
HOGENOM:HOG000240244 InParanoid:Q8LEG1 OMA:DESNTNW PhylomeDB:Q8LEG1
ProtClustDB:CLSN2688032 Genevestigator:Q8LEG1 GO:GO:0048766
Uniprot:Q8LEG1
Length = 258
Score = 144 (55.7 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 40/102 (39%), Positives = 59/102 (57%)
Query: 258 NALDSQFT--MPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISR 315
N +D T + SL ++ D ++ SV K RA +G AT P+S+ R+RR +I+
Sbjct: 134 NTVDESNTNWVDGQSLSNSSDDEKASVT--SVKGKTRATKGTATDPQSLYARKRREKINE 191
Query: 316 KLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKD 357
+LK LQ+LVPN K S ML+ AV ++K LQ Q++ L D
Sbjct: 192 RLKTLQNLVPNGTK-VDISTMLEEAVHYVKFLQLQIKLLSSD 232
>TAIR|locus:2152551 [details] [associations]
symbol:AT5G48560 "AT5G48560" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB015468 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 eggNOG:NOG283912
ProtClustDB:CLSN2684837 EMBL:AF488610 EMBL:BT002945 EMBL:BT005637
IPI:IPI00543091 RefSeq:NP_199667.1 UniGene:At.43769
ProteinModelPortal:Q9FJL4 SMR:Q9FJL4 IntAct:Q9FJL4 PaxDb:Q9FJL4
PRIDE:Q9FJL4 EnsemblPlants:AT5G48560.1 GeneID:834912
KEGG:ath:AT5G48560 TAIR:At5g48560 InParanoid:Q9FJL4 OMA:SASCYAT
PhylomeDB:Q9FJL4 Genevestigator:Q9FJL4 Uniprot:Q9FJL4
Length = 498
Score = 150 (57.9 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 34/76 (44%), Positives = 48/76 (63%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +I ++K LQDLVP +K T + MLD +
Sbjct: 295 PKDYI--HVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIIN 352
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 353 YVQSLQRQVEFLSMKL 368
>TAIR|locus:2014144 [details] [associations]
symbol:BEE1 "BR enhanced expression 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC013354
EMBL:AY138253 EMBL:AF488579 EMBL:AK117269 EMBL:BT005268
IPI:IPI00539846 RefSeq:NP_173276.2 UniGene:At.46141
ProteinModelPortal:Q8GZ13 SMR:Q8GZ13 IntAct:Q8GZ13
EnsemblPlants:AT1G18400.1 GeneID:838421 KEGG:ath:AT1G18400
TAIR:At1g18400 eggNOG:euNOG17991 HOGENOM:HOG000090950
InParanoid:Q8GZ13 PhylomeDB:Q8GZ13 ProtClustDB:CLSN2680013
Genevestigator:Q8GZ13 Uniprot:Q8GZ13
Length = 260
Score = 144 (55.7 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +I+ +L+ LQD+VP K + MLD + +++ LQNQ
Sbjct: 145 VRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQ 204
Query: 351 VENLHKDL 358
VE L L
Sbjct: 205 VEFLSMKL 212
>TAIR|locus:2202867 [details] [associations]
symbol:BPEp "AT1G59640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048446 "petal morphogenesis" evidence=IMP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009753 "response to jasmonic
acid stimulus" evidence=RCA] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0048441 "petal development" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AM269753 EMBL:AM269754
EMBL:AC009317 EMBL:BT003964 EMBL:BT005064 EMBL:AY086373
EMBL:AB028232 IPI:IPI00530097 IPI:IPI00531813 PIR:B96620 PIR:T52428
RefSeq:NP_564749.1 RefSeq:NP_849829.1 UniGene:At.455
ProteinModelPortal:Q0JXE7 SMR:Q0JXE7 IntAct:Q0JXE7 STRING:Q0JXE7
PRIDE:Q0JXE7 EnsemblPlants:AT1G59640.2 GeneID:842254
KEGG:ath:AT1G59640 TAIR:At1g59640 eggNOG:NOG296410
InParanoid:Q0JXE7 OMA:RGASPEW PhylomeDB:Q0JXE7
ProtClustDB:CLSN2688917 Genevestigator:Q0JXE7 GO:GO:0048446
Uniprot:Q0JXE7
Length = 343
Score = 147 (56.8 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 33/69 (47%), Positives = 45/69 (65%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 351 VENLHKDLE 359
VE L LE
Sbjct: 196 VEFLSMKLE 204
>UNIPROTKB|Q6ZCV8 [details] [associations]
symbol:P0028A08.20 "Os08g0487700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000145 EMBL:AP004557 RefSeq:NP_001062102.1 UniGene:Os.60678
EnsemblPlants:LOC_Os08g38080.1 GeneID:4345892 KEGG:osa:4345892
eggNOG:NOG275480 Uniprot:Q6ZCV8
Length = 365
Score = 147 (56.8 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 32/68 (47%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA++G AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 176 VRARKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSLQRQ 235
Query: 351 VENLHKDL 358
VE L L
Sbjct: 236 VEFLSMKL 243
>UNIPROTKB|Q5N802 [details] [associations]
symbol:P0004D12.24 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008207 eggNOG:NOG283912 EMBL:AP003433 EMBL:HQ858864
EMBL:AK101063 RefSeq:NP_001045188.1 UniGene:Os.5763
EnsemblPlants:LOC_Os01g68700.2 GeneID:4324327 KEGG:osa:4324327
ProtClustDB:CLSN2692207 Uniprot:Q5N802
Length = 481
Score = 150 (57.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 34/76 (44%), Positives = 49/76 (64%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS+++K LQDLVP +K + MLD +
Sbjct: 271 PKDYI--HVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIIN 328
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 329 YVQSLQRQVEFLSMKL 344
Score = 37 (18.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 7/13 (53%), Positives = 7/13 (53%)
Query: 18 PTTAAGVGGSGGL 30
P G GG GGL
Sbjct: 90 PQVGGGGGGGGGL 102
>UNIPROTKB|Q2QMV9 [details] [associations]
symbol:LOC_Os12g39850 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
KEGG:dosa:Os12t0589000-00 OMA:DESEMMA Uniprot:Q2QMV9
Length = 304
Score = 144 (55.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 34/68 (50%), Positives = 45/68 (66%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA RG AT P+S+ R+RR RI+ +LK LQ+LVPN K S ML+ AV ++K LQ
Sbjct: 215 KSRAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTK-VDISTMLEEAVHYVKFLQL 273
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 274 QIKLLSSD 281
>TAIR|locus:2007534 [details] [associations]
symbol:AT1G03040 "AT1G03040" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF251692
EMBL:AC006550 EMBL:AY054469 EMBL:AY114633 IPI:IPI00529284
PIR:B86161 RefSeq:NP_001184895.1 RefSeq:NP_563672.1
UniGene:At.20497 ProteinModelPortal:Q93Y00 SMR:Q93Y00 IntAct:Q93Y00
PaxDb:Q93Y00 PRIDE:Q93Y00 EnsemblPlants:AT1G03040.1 GeneID:839446
KEGG:ath:AT1G03040 TAIR:At1g03040 eggNOG:NOG281566
HOGENOM:HOG000239571 InParanoid:Q93Y00 OMA:SIVKPEM PhylomeDB:Q93Y00
ProtClustDB:CLSN2687635 Genevestigator:Q93Y00 Uniprot:Q93Y00
Length = 302
Score = 143 (55.4 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 31/71 (43%), Positives = 50/71 (70%)
Query: 284 EDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQH 343
+ ++ ++RA+RG AT P SIAER RR RI+ +++ LQ+LVP ++K T + M+D V +
Sbjct: 137 QSTIRPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDY 195
Query: 344 IKGLQNQVENL 354
+K L+ QV+ L
Sbjct: 196 VKFLRLQVKVL 206
>TAIR|locus:2132303 [details] [associations]
symbol:UNE12 "AT4G02590" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009567 "double fertilization forming a zygote and endosperm"
evidence=IMP] [GO:0031347 "regulation of defense response"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0007275 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000239571
ProtClustDB:CLSN2687635 EMBL:AC002330 EMBL:AL161494 GO:GO:0031347
GO:GO:0009567 EMBL:AF488592 EMBL:AF367328 EMBL:AY143951
EMBL:AY088218 IPI:IPI00545077 IPI:IPI00892352 PIR:T01090
RefSeq:NP_001031577.1 RefSeq:NP_001118919.1 RefSeq:NP_567245.1
UniGene:At.20028 ProteinModelPortal:O22768 SMR:O22768 IntAct:O22768
PaxDb:O22768 PRIDE:O22768 EnsemblPlants:AT4G02590.1
EnsemblPlants:AT4G02590.2 GeneID:828126 KEGG:ath:AT4G02590
TAIR:At4g02590 eggNOG:euNOG02041 InParanoid:O22768 OMA:PAWEKWS
PhylomeDB:O22768 Genevestigator:O22768 Uniprot:O22768
Length = 310
Score = 143 (55.4 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 32/69 (46%), Positives = 49/69 (71%)
Query: 286 SVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIK 345
S+ ++RA+RG AT P SIAER RR RI+ +++ LQ+LVP ++K T + M+D V ++K
Sbjct: 141 SIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVK 199
Query: 346 GLQNQVENL 354
L+ QV+ L
Sbjct: 200 FLRLQVKVL 208
>TAIR|locus:2201906 [details] [associations]
symbol:AT1G10120 "AT1G10120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC004122 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT012655 EMBL:AK221806 EMBL:AK229309
EMBL:AK230347 EMBL:AF488606 IPI:IPI00541831 PIR:T00632
RefSeq:NP_172483.4 UniGene:At.43391 UniGene:At.69296
ProteinModelPortal:Q6NKN9 SMR:Q6NKN9 EnsemblPlants:AT1G10120.1
GeneID:837549 KEGG:ath:AT1G10120 TAIR:At1g10120 eggNOG:NOG271189
HOGENOM:HOG000090626 InParanoid:Q6NKN9 OMA:GESSHED PhylomeDB:Q6NKN9
ProtClustDB:CLSN2681496 Genevestigator:Q6NKN9 Uniprot:Q6NKN9
Length = 366
Score = 144 (55.7 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 31/68 (45%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS +++ LQ+LVP +K T + MLD + +++ LQ Q
Sbjct: 206 MRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 265
Query: 351 VENLHKDL 358
VE L L
Sbjct: 266 VEFLSMKL 273
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 126 (49.4 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KR A +++E+ RR+RI+ K+K LQ L+PN +K T + MLD A++++K LQ QV+
Sbjct: 193 SKRCRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 251
Query: 353 NL 354
L
Sbjct: 252 ML 253
Score = 53 (23.7 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 200 SENGIDGVSSGSGRQNATHSYS---TASFGMDSWENGTSIVFSAPPSK 244
+ N + G SSG+ +++ S T + +S E G ++V AP SK
Sbjct: 137 NNNNVQGNSSGTRVSSSSVGASGNETDEYDCESEEGGEAVVDEAPSSK 184
Score = 37 (18.1 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 7/27 (25%), Positives = 10/27 (37%)
Query: 3 HHPXXXXXXQQNPMGPTTAAGVGGSGG 29
HHP +G + +GG G
Sbjct: 98 HHPPSDSVLMSKRVGDFSEVLIGGGSG 124
>TAIR|locus:2118934 [details] [associations]
symbol:RSL2 "AT4G33880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0048766 "root hair initiation"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0003677 GO:GO:0016049 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL031032
EMBL:AL161584 HOGENOM:HOG000240244 GO:GO:0048766 EMBL:AF488616
EMBL:BT003137 EMBL:AK228110 IPI:IPI00526320 PIR:T05216
RefSeq:NP_195114.2 UniGene:At.31542 ProteinModelPortal:Q84WK0
SMR:Q84WK0 EnsemblPlants:AT4G33880.1 GeneID:829531
KEGG:ath:AT4G33880 TAIR:At4g33880 eggNOG:NOG318365
InParanoid:Q84WK0 OMA:TINTNSY PhylomeDB:Q84WK0
ProtClustDB:CLSN2680247 Genevestigator:Q84WK0 Uniprot:Q84WK0
Length = 352
Score = 142 (55.0 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA RG AT P+S+ R+RR RI+ +L+ LQ+LVPN K S ML+ AV ++K LQ
Sbjct: 265 KTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQL 323
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 324 QIKLLSSD 331
>UNIPROTKB|Q69Y51 [details] [associations]
symbol:P0698A06.26-2 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP003514
ProteinModelPortal:Q69Y51 EnsemblPlants:LOC_Os06g09370.3
Gramene:Q69Y51 HOGENOM:HOG000241730 Uniprot:Q69Y51
Length = 401
Score = 143 (55.4 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 34/65 (52%), Positives = 44/65 (67%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
+ RA+RG AT P SIAER RR +IS ++K LQ LVPN +K S MLD + ++K LQ
Sbjct: 238 RTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKAS-MLDEIIDYVKFLQL 296
Query: 350 QVENL 354
QV+ L
Sbjct: 297 QVKVL 301
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 137 (53.3 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 29/67 (43%), Positives = 44/67 (65%)
Query: 288 PCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGL 347
P + R KR A +++E+ RR+RI+ K+K LQ L+PN K T + MLD A++++K L
Sbjct: 23 PARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEYLKQL 81
Query: 348 QNQVENL 354
Q QV+ L
Sbjct: 82 QLQVQML 88
>TAIR|locus:504954900 [details] [associations]
symbol:AT5G43175 "AT5G43175" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB008267 HOGENOM:HOG000240244 ProtClustDB:CLSN2688032
IPI:IPI00519888 RefSeq:NP_680385.1 UniGene:At.55333
ProteinModelPortal:Q3E7L7 SMR:Q3E7L7 EnsemblPlants:AT5G43175.1
GeneID:834335 KEGG:ath:AT5G43175 TAIR:At5g43175 eggNOG:NOG323547
InParanoid:Q3E7L7 OMA:MENEAFV PhylomeDB:Q3E7L7
Genevestigator:Q3E7L7 Uniprot:Q3E7L7
Length = 223
Score = 133 (51.9 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 279 LLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLD 338
L++ S+ K +A RG A+ P+S+ R+RR RI+ +LK LQ LVPN K S ML+
Sbjct: 120 LVSNTSKSLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTK-VDISTMLE 178
Query: 339 LAVQHIKGLQNQVENLHKD 357
AV ++K LQ Q++ L +
Sbjct: 179 DAVHYVKFLQLQIKLLSSE 197
>TAIR|locus:2074865 [details] [associations]
symbol:HEC2 "AT3G50330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] [GO:0080126 "ovary
septum development" evidence=IGI] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL132976
HOGENOM:HOG000242863 ProtClustDB:CLSN2684406 GO:GO:0048462
GO:GO:0010500 EMBL:BT010607 EMBL:AK175679 EMBL:AK175912
EMBL:AK176020 IPI:IPI00532987 PIR:T45579 RefSeq:NP_190602.1
UniGene:At.35505 ProteinModelPortal:Q9SND4 SMR:Q9SND4 IntAct:Q9SND4
EnsemblPlants:AT3G50330.1 GeneID:824195 KEGG:ath:AT3G50330
TAIR:At3g50330 eggNOG:NOG315110 InParanoid:Q9SND4 OMA:NANMAAM
PhylomeDB:Q9SND4 Genevestigator:Q9SND4 GO:GO:0080126 Uniprot:Q9SND4
Length = 231
Score = 130 (50.8 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 43/142 (30%), Positives = 69/142 (48%)
Query: 215 NATHSYSTASFGMDSWENGTSIVFSAPPSKRTKTLDGDIFNCLNALDSQFTMPQTSLEMA 274
N THS+ M + G + ++ PS G + NA + M + +A
Sbjct: 48 NPTHSHLPFDQTMPHHQPGLNFRYAPSPSSSLPEKRGGCSD--NA--NMAAMREMIFRIA 103
Query: 275 TVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYS 334
+ + PE P K + R + P+S+A R RR RIS +++ LQ LVP K + S
Sbjct: 104 VMQPIHIDPESVKPPKRKNVR-ISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTAS 162
Query: 335 DMLDLAVQHIKGLQNQVENLHK 356
MLD A+ ++K L+ QV++L +
Sbjct: 163 -MLDEAIHYVKFLKKQVQSLEE 183
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 134 (52.2 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 31/79 (39%), Positives = 52/79 (65%)
Query: 276 VDNLLNIPEDSVPCKIRA--KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSY 333
VD+L + +++ P K A +R A +++ER RR RI+ KL+ LQ+LVP+ +K T
Sbjct: 205 VDSLSEVADETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDK 263
Query: 334 SDMLDLAVQHIKGLQNQVE 352
+ +LD A++++K LQ QV+
Sbjct: 264 ASILDEAIEYLKSLQMQVQ 282
>UNIPROTKB|Q67TR8 [details] [associations]
symbol:B1342C04.6 "Basic helix-loop-helix (BHLH)-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP005655 EMBL:AP006057
EMBL:AK060477 EMBL:AK070458 RefSeq:NP_001063357.1 UniGene:Os.51063
EnsemblPlants:LOC_Os09g28210.1 GeneID:4347252 KEGG:osa:4347252
OMA:AYPAFHA ProtClustDB:CLSN2697769 Uniprot:Q67TR8
Length = 236
Score = 128 (50.1 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 46/162 (28%), Positives = 78/162 (48%)
Query: 195 QISEESENGIDGVSSGSGRQNATHSYSTASFGMDSWENGTSIVFSAPPSKRTKTLDGDIF 254
Q S + + ++G G Q+ +S A++G + + S+P S D
Sbjct: 53 QFSPPPQMSVTTTTAGGGYQDQYNSMP-ATYGAGAGVHQLDFAMSSPGS------DSGAP 105
Query: 255 NCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRIS 314
++ S M + +A + + PE P K R R + P+S+A R RR RIS
Sbjct: 106 QGSSSSSSSEAMREMIFHIAALQPVEIDPEAVRPPKRRNVR-ISKDPQSVAARLRRERIS 164
Query: 315 RKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHK 356
+++ LQ LVP K + S MLD A+ ++K L++QV++L +
Sbjct: 165 ERIRILQRLVPGGTKMDTAS-MLDEAIHYVKFLKSQVQSLER 205
>UNIPROTKB|Q6Z9R3 [details] [associations]
symbol:P0461F06.33 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000145
eggNOG:NOG315110 EMBL:AP004693 EnsemblPlants:LOC_Os08g36740.1
OMA:SAMREMI Uniprot:Q6Z9R3
Length = 246
Score = 126 (49.4 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 34/78 (43%), Positives = 49/78 (62%)
Query: 280 LNI-PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLD 338
+NI PE P K R R +T P+S+A R RR RIS +++ LQ LVP K + S MLD
Sbjct: 140 VNIDPETVRPPKRRNVR-ISTDPQSVAARMRRERISERIRILQRLVPGGTKMDTAS-MLD 197
Query: 339 LAVQHIKGLQNQVENLHK 356
A+ ++K L+ QV++L +
Sbjct: 198 EAIHYVKFLKTQVQSLER 215
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 43/167 (25%), Positives = 81/167 (48%)
Query: 194 SQISEESENGIDGVSSG-SGRQNATHSYSTASFGMDSWENGTSIVFSAPPSKRTKTLDGD 252
+Q+S + SG + R + T S + A G + G ++ +AP + T T
Sbjct: 176 TQVSPSATPSAAASESGLTRRTDGTDSSAVAGGGAYN-RKGKAVAMTAPAIEITGTSSSV 234
Query: 253 IFNCLNALDSQFT----MPQTSLEMATVDNLLNIPEDSVPCKIRA---KRGCATHPRSIA 305
+ + ++ + T + E T D + E++ ++ KR A +++
Sbjct: 235 VSK--SEIEPEKTNVDDRKRKEREATTTDETESRSEETKQARVSTTSTKRSRAAEVHNLS 292
Query: 306 ERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
ER+RR RI+ ++K LQ+L+P +K S MLD A++++K LQ Q++
Sbjct: 293 ERKRRDRINERMKALQELIPRCNKSDKAS-MLDEAIEYMKSLQLQIQ 338
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 119 (46.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 288 PCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGL 347
P R R H + +ER RR RI+ KLK LQ+L+PN K S MLD A+ ++K L
Sbjct: 6 PTPTRRSRSAEFH--NFSERRRRDRINEKLKALQELLPNCTKTDKVS-MLDEAIDYLKSL 62
Query: 348 QNQVENL 354
Q Q++ L
Sbjct: 63 QLQLQML 69
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 126 (49.4 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 26/62 (41%), Positives = 43/62 (69%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KR A +++E+ RR++I+ K+K LQ L+PN +K T + MLD A++++K LQ QV+
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 157
Query: 353 NL 354
L
Sbjct: 158 ML 159
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 121 (47.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 25/61 (40%), Positives = 42/61 (68%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR +++E++RR++I+ K+K LQ L+PN +K T + MLD A++++K LQ QV+
Sbjct: 90 KRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQT 148
Query: 354 L 354
L
Sbjct: 149 L 149
>UNIPROTKB|Q6AV35 [details] [associations]
symbol:OSJNBa0063J18.7 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140
EMBL:AC107206 RefSeq:NP_001050667.1 UniGene:Os.79759
EnsemblPlants:LOC_Os03g42100.1 GeneID:4333457 KEGG:osa:4333457
eggNOG:NOG300710 OMA:CTSENDS ProtClustDB:CLSN2694086 Uniprot:Q6AV35
Length = 310
Score = 123 (48.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 37/93 (39%), Positives = 53/93 (56%)
Query: 270 SLEMATVDN-LLNIPEDSVPCKI--RAKRG--CATHPRSIAERERRTRISRKLKKLQDLV 324
SL T +N + E V K +A+ G AT P+S+ R+RR RI+ +LK LQ+LV
Sbjct: 195 SLSCCTSENDSIGSQESPVAAKSNGKAQSGHRSATDPQSLYARKRRERINERLKILQNLV 254
Query: 325 PNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKD 357
PN K S ML+ A+ ++K LQ Q++ L D
Sbjct: 255 PNGTK-VDISTMLEEAMHYVKFLQLQIKLLSSD 286
>TAIR|locus:2155543 [details] [associations]
symbol:HEC1 "HECATE 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010500 "transmitting tissue
development" evidence=IGI] [GO:0048462 "carpel formation"
evidence=IMP] [GO:0048445 "carpel morphogenesis" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:AF488618 EMBL:AK228927 IPI:IPI00530790
RefSeq:NP_201507.1 UniGene:At.28829 ProteinModelPortal:Q9FHA7
SMR:Q9FHA7 IntAct:Q9FHA7 EnsemblPlants:AT5G67060.1 GeneID:836841
KEGG:ath:AT5G67060 TAIR:At5g67060 eggNOG:NOG267961
HOGENOM:HOG000242863 InParanoid:Q9FHA7 OMA:FLFNSTH PhylomeDB:Q9FHA7
ProtClustDB:CLSN2684406 Genevestigator:Q9FHA7 GO:GO:0048462
GO:GO:0010500 Uniprot:Q9FHA7
Length = 241
Score = 120 (47.3 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 45/150 (30%), Positives = 72/150 (48%)
Query: 215 NATHSYSTASFGMD-SWENGTSIVFSAPPSKRTKTLDGDIF-------NCLNALDSQFTM 266
N+TH S S + + G+ ++ + P S T +F N N + M
Sbjct: 40 NSTHYQSDHSMTNEPGFRYGSGLLTN-PSSISPNTAYSSVFLDKRNNSNNNNNGTNMAAM 98
Query: 267 PQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPN 326
+ +A + + PE P K R R + P+S+A R RR RIS +++ LQ LVP
Sbjct: 99 REMIFRIAVMQPIHIDPEAVKPPKRRNVR-ISKDPQSVAARHRRERISERIRILQRLVPG 157
Query: 327 MDKQTSYSDMLDLAVQHIKGLQNQVENLHK 356
K + S MLD A+ ++K L+ QV++L +
Sbjct: 158 GTKMDTAS-MLDEAIHYVKFLKKQVQSLEE 186
>TAIR|locus:2076581 [details] [associations]
symbol:AT3G57800 "AT3G57800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL049660 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000037005 ProtClustDB:CLSN2680198
EMBL:AF488593 EMBL:AL132977 EMBL:AY139773 EMBL:BT003037
EMBL:AY085849 IPI:IPI00532305 IPI:IPI00535946 PIR:T46002
RefSeq:NP_567057.2 RefSeq:NP_850745.1 UniGene:At.34797
ProteinModelPortal:Q3EAI1 EnsemblPlants:AT3G57800.1 GeneID:825530
KEGG:ath:AT3G57800 TAIR:At3g57800 eggNOG:NOG254513
InParanoid:Q3EAI1 OMA:MVASANL PhylomeDB:Q3EAI1
Genevestigator:Q3EAI1 Uniprot:Q3EAI1
Length = 426
Score = 117 (46.2 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 26/69 (37%), Positives = 41/69 (59%)
Query: 274 ATVDNLLNIPEDSVP-CKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTS 332
+T N + + +P +RA+RG AT S+AER RR +I+ ++K LQ+LVP DK T
Sbjct: 186 STKKNKSSEENEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKGTD 245
Query: 333 YSDMLDLAV 341
+ + + V
Sbjct: 246 FGGKIKIKV 254
Score = 47 (21.6 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 336 MLDLAVQHIKGLQNQVENL 354
+LD + H++ LQ QVE L
Sbjct: 296 VLDEIINHVQSLQRQVEML 314
>TAIR|locus:2117788 [details] [associations]
symbol:AT4G28800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 IPI:IPI00517558
IPI:IPI01020410 PIR:T04519 RefSeq:NP_194609.5 UniGene:At.71648
ProteinModelPortal:Q9SVU7 SMR:Q9SVU7 GeneID:829001
KEGG:ath:AT4G28800 TAIR:At4g28800 InParanoid:Q9SVU7
Genevestigator:Q9SVU7 Uniprot:Q9SVU7
Length = 445
Score = 122 (48.0 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 24/61 (39%), Positives = 39/61 (63%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR ++AER RR +I+ K+K LQ L+P +K T S LD A++++K LQ+Q++
Sbjct: 252 KRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVST-LDDAIEYVKSLQSQIQG 310
Query: 354 L 354
+
Sbjct: 311 M 311
>UNIPROTKB|Q2R0R9 [details] [associations]
symbol:LOC_Os11g41640 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240244 KEGG:dosa:Os11t0634700-00 Gramene:Q2R0R9
OMA:SLYAKRR Uniprot:Q2R0R9
Length = 246
Score = 117 (46.2 bits), Expect = 0.00010, P = 0.00010
Identities = 38/124 (30%), Positives = 61/124 (49%)
Query: 242 PSKRTKTLDGDIFNCLNALD----SQFTMPQTSLEMATVDNLLNIPEDSVPCK----IRA 293
P K+T+T + + D S+ P S + ++ + + SV K R
Sbjct: 99 PKKKTRT-SRSVSSSSTITDYETSSELVNPSCSSGSSVGEDSIAATDGSVVLKQSDNSRG 157
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
+ C+ +S+ + RR RI+ +L+ LQ LVPN K S ML+ AVQ++K LQ Q++
Sbjct: 158 HKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTK-VDISTMLEEAVQYVKFLQLQIKL 216
Query: 354 LHKD 357
L D
Sbjct: 217 LSSD 220
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 121 (47.7 bits), Expect = 0.00016, P = 0.00016
Identities = 25/60 (41%), Positives = 41/60 (68%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KR + +++ER RR RI+ K++ LQ+L+PN +K S MLD A++++K LQ QV+
Sbjct: 339 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKAS-MLDEAIEYLKSLQLQVQ 397
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 118 (46.6 bits), Expect = 0.00027, P = 0.00027
Identities = 40/134 (29%), Positives = 68/134 (50%)
Query: 221 STASFGMDSWE--NGTSIVFSAPPSKRTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDN 278
S S+G ++ E +GTS+ KR +D D + SQ + TS + T+ N
Sbjct: 192 SGCSYGRNNKETVSGTSVTIDR---KRKHVMDADQESV-----SQSDIGLTSTDDQTMGN 243
Query: 279 LLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLD 338
+ S R R H +++ER RR RI+ ++K LQ+L+P+ + T + +LD
Sbjct: 244 KSSQRSGST----RRSRAAEVH--NLSERRRRDRINERMKALQELIPHCSR-TDKASILD 296
Query: 339 LAVQHIKGLQNQVE 352
A+ ++K LQ Q++
Sbjct: 297 EAIDYLKSLQMQLQ 310
>UNIPROTKB|Q5MP56 [details] [associations]
symbol:BA1 "Uncharacterized protein" species:4577 "Zea
mays" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY683001 EMBL:AY683002
EMBL:BT062649 RefSeq:NP_001105271.1 UniGene:Zm.18382 IntAct:Q5MP56
GeneID:542186 KEGG:zma:542186 HOGENOM:HOG000238432 OMA:MLEQAIH
Uniprot:Q5MP56
Length = 219
Score = 111 (44.1 bits), Expect = 0.00037, P = 0.00037
Identities = 25/59 (42%), Positives = 40/59 (67%)
Query: 298 ATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHK 356
+T P+S+A RERR RIS + + L+ LVP K + S ML+ A+ ++K L+ Q+ +LH+
Sbjct: 53 STDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVS-MLEQAIHYVKFLKTQI-SLHQ 109
>TAIR|locus:2156015 [details] [associations]
symbol:RSL1 "AT5G37800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000006063 ProtClustDB:CLSN2681768 EMBL:AB016873
IPI:IPI00523734 RefSeq:NP_198596.1 UniGene:At.55195
ProteinModelPortal:Q9FJ00 SMR:Q9FJ00 EnsemblPlants:AT5G37800.1
GeneID:833758 KEGG:ath:AT5G37800 TAIR:At5g37800 eggNOG:NOG303056
InParanoid:Q9FJ00 OMA:MDFNASS PhylomeDB:Q9FJ00
Genevestigator:Q9FJ00 Uniprot:Q9FJ00
Length = 307
Score = 114 (45.2 bits), Expect = 0.00039, P = 0.00039
Identities = 31/76 (40%), Positives = 43/76 (56%)
Query: 283 PEDSVPCKIRAKRGCATH-PRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAV 341
P KI+ K + P+S+A + RR RIS +LK LQ+LVPN K ML+ A+
Sbjct: 192 PSSGTNGKIKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGTK-VDLVTMLEKAI 250
Query: 342 QHIKGLQNQVENLHKD 357
++K LQ QV+ L D
Sbjct: 251 GYVKFLQVQVKVLAAD 266
>TAIR|locus:2089418 [details] [associations]
symbol:AT3G21330 "AT3G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP001305 EMBL:AF488617 EMBL:BT004279 EMBL:BT020364
IPI:IPI00541948 RefSeq:NP_188770.1 UniGene:At.38078
ProteinModelPortal:Q8S3D2 SMR:Q8S3D2 EnsemblPlants:AT3G21330.1
GeneID:821687 KEGG:ath:AT3G21330 TAIR:At3g21330 eggNOG:NOG330001
HOGENOM:HOG000095219 InParanoid:Q9LIG3 OMA:LMARELC PhylomeDB:Q8S3D2
ProtClustDB:CLSN2685101 Genevestigator:Q8S3D2 Uniprot:Q8S3D2
Length = 373
Score = 115 (45.5 bits), Expect = 0.00043, P = 0.00043
Identities = 32/77 (41%), Positives = 46/77 (59%)
Query: 298 ATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV---ENL 354
+T P+++A R+RR RIS K++ LQ LVP K + S MLD A ++K L+ QV ENL
Sbjct: 276 STDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTAS-MLDEAANYLKFLRAQVKALENL 334
Query: 355 HKDLE--HCTCGCKPTS 369
L+ + + PTS
Sbjct: 335 RPKLDQTNLSFSSAPTS 351
>UNIPROTKB|Q2QMN2 [details] [associations]
symbol:LOC_Os12g40590 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 EMBL:CM000149 eggNOG:NOG272270
KEGG:dosa:Os12t0597800-01 Uniprot:Q2QMN2
Length = 265
Score = 112 (44.5 bits), Expect = 0.00048, P = 0.00048
Identities = 28/67 (41%), Positives = 39/67 (58%)
Query: 290 KIRAKRGCA-THPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQ 348
K R G A TH + E+ RR+RI+ K K LQ LVP DK S S LD + ++K LQ
Sbjct: 146 KARRNPGYAETH--GLTEKRRRSRINEKFKMLQRLVPGCDK-CSQSSTLDRTIHYMKSLQ 202
Query: 349 NQVENLH 355
Q++ ++
Sbjct: 203 QQLQAMY 209
>UNIPROTKB|Q6K8Y4 [details] [associations]
symbol:OJ1695_H09.18 "Basic helix-loop-helix (BHLH)-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000239571 EMBL:AP003975 EMBL:AP004094
EnsemblPlants:LOC_Os02g55250.1 OMA:GQDDFFD Uniprot:Q6K8Y4
Length = 463
Score = 97 (39.2 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 309 RRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENL 354
RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ QV+ L
Sbjct: 252 RRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVL 296
Score = 56 (24.8 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 12/16 (75%), Positives = 13/16 (81%)
Query: 292 RAKRGCATHPRSIAER 307
RA+RG AT P SIAER
Sbjct: 213 RARRGQATDPHSIAER 228
Score = 39 (18.8 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 8/15 (53%), Positives = 8/15 (53%)
Query: 15 PMGPTTAAGVGGSGG 29
P TA VGG GG
Sbjct: 42 PAWDLTAGAVGGGGG 56
Score = 37 (18.1 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 17 GPTTAAGVGGSGGLTRYVSAPGS 39
G AA GG GG +A G+
Sbjct: 176 GGGAAASGGGGGGSASAAAAAGA 198
>UNIPROTKB|Q9ASJ3 [details] [associations]
symbol:P0439B06.24 "Putative uncharacterized protein
P0439B06.24" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP002882 UniGene:Os.30617
ProteinModelPortal:Q9ASJ3 Gramene:Q9ASJ3 OMA:KAITYVK
ProtClustDB:CLSN2918925 Uniprot:Q9ASJ3
Length = 294
Score = 112 (44.5 bits), Expect = 0.00061, P = 0.00061
Identities = 28/57 (49%), Positives = 36/57 (63%)
Query: 301 PRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKD 357
P+S A + RR RIS +LK LQDLVPN K ML+ A+ ++K LQ QV+ L D
Sbjct: 208 PQSAAAKVRRERISERLKVLQDLVPNGTK-VDLVTMLEKAINYVKFLQLQVKVLATD 263
>TAIR|locus:2028957 [details] [associations]
symbol:RHD6 "AT1G66470" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0048766 "root
hair initiation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048766 EMBL:AC074025
EMBL:AY128310 EMBL:BT006320 EMBL:AF488615 IPI:IPI00529158
PIR:C96690 RefSeq:NP_176820.1 UniGene:At.35765
ProteinModelPortal:Q9C707 SMR:Q9C707 IntAct:Q9C707
EnsemblPlants:AT1G66470.1 GeneID:842965 KEGG:ath:AT1G66470
TAIR:At1g66470 eggNOG:NOG301765 HOGENOM:HOG000006063
InParanoid:Q9C707 OMA:HESFPPP PhylomeDB:Q9C707
ProtClustDB:CLSN2681768 Genevestigator:Q9C707 Uniprot:Q9C707
Length = 298
Score = 112 (44.5 bits), Expect = 0.00063, P = 0.00063
Identities = 27/57 (47%), Positives = 37/57 (64%)
Query: 301 PRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKD 357
P+S+A + RR RIS +LK LQ+LVPN K ML+ A+ ++K LQ QV+ L D
Sbjct: 205 PQSLAAKNRRERISERLKILQELVPNGTK-VDLVTMLEKAISYVKFLQVQVKVLATD 260
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 114 (45.2 bits), Expect = 0.00063, P = 0.00063
Identities = 26/65 (40%), Positives = 41/65 (63%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
+ R A H +S ER+RR +I++++K LQ LVPN K T + MLD ++++K LQ QV
Sbjct: 210 KRSRAAAIHNQS--ERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQV 266
Query: 352 ENLHK 356
+ +
Sbjct: 267 SMMSR 271
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 116 (45.9 bits), Expect = 0.00063, P = 0.00063
Identities = 25/59 (42%), Positives = 39/59 (66%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
KR +++ER RR RI+ K++ LQ+L+PN +K S MLD A++++K LQ QV+
Sbjct: 309 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKAS-MLDEAIEYLKTLQLQVQ 366
>TAIR|locus:4010713916 [details] [associations]
symbol:AT4G28815 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
PIR:H85335 PIR:T04518 EMBL:AJ577586 IPI:IPI00530422
RefSeq:NP_001078463.1 UniGene:At.71260 ProteinModelPortal:Q7XHI7
SMR:Q7XHI7 EnsemblPlants:AT4G28815.1 GeneID:5008171
KEGG:ath:AT4G28815 TAIR:At4g28815 eggNOG:NOG83291 PhylomeDB:Q7XHI7
Genevestigator:Q7XHI7 Uniprot:Q7XHI7
Length = 307
Score = 111 (44.1 bits), Expect = 0.00086, P = 0.00086
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
KR A ++AER RR +I+ ++K LQ L+P +K T S ML+ ++++K L+ Q+
Sbjct: 147 KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVS-MLEDVIEYVKSLEMQI 203
>UNIPROTKB|Q8W5G3 [details] [associations]
symbol:OSJNBa0002J24.23 "Helix-loop-helix DNA-binding
domain containing protein, expressed" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000140 HOGENOM:HOG000240244 EMBL:AC090713
EnsemblPlants:LOC_Os03g55550.1 eggNOG:NOG237829 OMA:WIWERRR
Uniprot:Q8W5G3
Length = 310
Score = 111 (44.1 bits), Expect = 0.00088, P = 0.00088
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K+ A+R AT +S+ R RR RI+ +L+ LQ LVPN K S ML+ AV ++K LQ
Sbjct: 209 KVPARRRSATIAQSLYARRRRERINGRLRILQKLVPNGTK-VDISTMLEEAVHYVKFLQL 267
Query: 350 QVE 352
Q++
Sbjct: 268 QIK 270
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.127 0.369 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 369 295 0.00092 115 3 11 23 0.46 34
33 0.44 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 76
No. of states in DFA: 609 (65 KB)
Total size of DFA: 199 KB (2112 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.50u 0.12s 25.62t Elapsed: 00:00:01
Total cpu time: 25.51u 0.12s 25.63t Elapsed: 00:00:01
Start: Sat May 11 12:29:27 2013 End: Sat May 11 12:29:28 2013